BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy2887
         (899 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|399020377|ref|ZP_10722510.1| ATP-dependent chaperone ClpB [Herbaspirillum sp. CF444]
 gi|398095138|gb|EJL85485.1| ATP-dependent chaperone ClpB [Herbaspirillum sp. CF444]
          Length = 863

 Score =  942 bits (2435), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/620 (70%), Positives = 548/620 (88%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI++GEVP+SL SK++L LD+A LLAG KYRGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIVSGEVPDSLKSKRVLSLDMAALLAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +LKEI+ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 261 AVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           +YIEKDAA ERRFQKI+V+EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RY
Sbjct: 321 KYIEKDAALERRFQKIIVDEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DRF+PDKAIDLIDEAAAKIKIEIDSKPE+MDKL+RRLIQLKIE EA+KRE DE+S+KR
Sbjct: 381 ITDRFLPDKAIDLIDEAAAKIKIEIDSKPEVMDKLDRRLIQLKIEREAVKREKDEASQKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L LI++EI KLE +YA+LE+IWK EK  ++ SQ +KEEIE++RL++++ATRKSDWQ VS+
Sbjct: 441 LTLIEEEIVKLEREYADLEEIWKSEKATVQGSQHLKEEIERIRLQMDEATRKSDWQKVSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           LKYG+L +LE+ L+ +S++D     N +K  L++T+VG+EEIAEIV+R TGIPVS+++Q 
Sbjct: 501 LKYGKLAELEKALETQSKQDAASEQNVSKPRLVRTQVGAEEIAEIVARATGIPVSRMMQG 560

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           EREKLL++E +L +RVVGQDEAI AVS+AIRRSR+GL D  +PYGSFMFLGPTGVGKTEL
Sbjct: 561 EREKLLHMEEVLHQRVVGQDEAIVAVSDAIRRSRAGLGDPSKPYGSFMFLGPTGVGKTEL 620

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L++ +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+I
Sbjct: 621 CKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVI 680

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS KI+ ME  D  
Sbjct: 681 LLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHKIQAMEDSDPA 740

Query: 555 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 614
           ++K+AVM EV+++FRPEFINR+D+I+VF  L+ KNI +IA IQL+IL+ +L +M++ L I
Sbjct: 741 VVKMAVMAEVRLHFRPEFINRVDEIVVFHALDEKNIGAIAKIQLHILEERLARMDIGLVI 800

Query: 615 SKAALKKISNIGFDLIYGAR 634
           S A L+KI+  GFD +YGAR
Sbjct: 801 SDAGLQKIAEAGFDPVYGAR 820


>gi|398835100|ref|ZP_10592480.1| ATP-dependent chaperone ClpB, partial [Herbaspirillum sp. YR522]
 gi|398218198|gb|EJN04711.1| ATP-dependent chaperone ClpB, partial [Herbaspirillum sp. YR522]
          Length = 794

 Score =  929 bits (2402), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/620 (70%), Positives = 544/620 (87%), Gaps = 1/620 (0%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+SL SK++L LD+A LLAG KYRGEFE+RLK
Sbjct: 132 NPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSLDMAALLAGAKYRGEFEERLK 191

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +LKEI+ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 192 SVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYR 251

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           QYIEKDAA ERRFQKILV+EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RY
Sbjct: 252 QYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRY 311

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DRF+PDKAIDLIDEAAAKIKIEIDSKPE+MDKL+RRLIQLKIE EA+KRE DE+S+KR
Sbjct: 312 ITDRFLPDKAIDLIDEAAAKIKIEIDSKPEVMDKLDRRLIQLKIEREAVKREKDEASQKR 371

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L LI++EI +L+ +YA+LE+IWK EK+  +  QQ++EEIEK+R+++ +ATRKSDWQ VS+
Sbjct: 372 LQLIEEEIARLDREYADLEEIWKAEKSTAQGGQQLREEIEKLRIQMEEATRKSDWQKVSE 431

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           LKYG+L +LE  L+ +++KD        K  L++T+VG+EEIAEIV+R TGIPVS+++Q 
Sbjct: 432 LKYGKLAELEAALEVQNKKDA-AGVTGEKPRLVRTQVGAEEIAEIVARATGIPVSRMMQG 490

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           EREKLL++E +L +RVVGQDEAI AVS+AIRRSR+GL D  +PYGSFMFLGPTGVGKTEL
Sbjct: 491 EREKLLHMEEVLHERVVGQDEAIIAVSDAIRRSRAGLGDPSKPYGSFMFLGPTGVGKTEL 550

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CKTL++ +F+ EE+IIRIDMSEF+EKHS++RLIGAPPGY+GYEEGG+LTE VRRKPYS+I
Sbjct: 551 CKTLASYLFDTEEAIIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGHLTEAVRRKPYSVI 610

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS KI+ ME  D  
Sbjct: 611 LLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHKIQSMEGSDPA 670

Query: 555 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 614
           ++KLAVM EV+ +FRPEFINR+D+++VF  L+ KNI +IA IQL IL+ +L ++ + L+I
Sbjct: 671 LVKLAVMAEVRTHFRPEFINRVDELVVFHALDEKNIGAIARIQLRILEQRLARLEIGLEI 730

Query: 615 SKAALKKISNIGFDLIYGAR 634
           S AAL+KI+  GFD +YGAR
Sbjct: 731 SDAALQKIAEAGFDPVYGAR 750


>gi|340787492|ref|YP_004752957.1| ClpB protein [Collimonas fungivorans Ter331]
 gi|340552759|gb|AEK62134.1| ClpB protein [Collimonas fungivorans Ter331]
          Length = 867

 Score =  926 bits (2393), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 435/624 (69%), Positives = 544/624 (87%), Gaps = 3/624 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+SL SK++L LD+A LLAG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSLDMAALLAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKEI+ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQKILV+EP +E TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVHHGVEITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAAKIKIEIDSKPE+MDKL+RRLIQLKIE EA++RE DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAAAKIKIEIDSKPEVMDKLDRRLIQLKIEREAVRREKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R  LI++EI KL  +YA+LE+IWK EK   + S+ +KEEIEK+RL+I++ATR SDWQ VS
Sbjct: 440 RFSLIEEEIEKLSREYADLEEIWKSEKASAQGSKHLKEEIEKLRLQIDEATRNSDWQKVS 499

Query: 314 KLKYGELNKLERILKEKSQKD---IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSK 370
           +LKYG+LN+LE+ L+ +S++D      P+   +  L++T+VG++EIAEIVSR TGIPVSK
Sbjct: 500 ELKYGKLNELEKALETQSRQDALAAAHPDPDGRPQLVRTQVGADEIAEIVSRATGIPVSK 559

Query: 371 IVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVG 430
           ++Q ER+KL+ +E+ L KRVVGQ+EAI AVS+AIRRSR+GLSD  RPYGSFMFLGPTGVG
Sbjct: 560 MLQGERDKLVKMEDELHKRVVGQNEAIVAVSDAIRRSRAGLSDPDRPYGSFMFLGPTGVG 619

Query: 431 KTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKP 490
           KTELCK L+  +F++ +++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE+VRRKP
Sbjct: 620 KTELCKALAGFLFDSTDALIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTELVRRKP 679

Query: 491 YSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK 550
           YS+ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS +I+ ME 
Sbjct: 680 YSVILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHRIQAMEG 739

Query: 551 GDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNM 610
            D  ++K+ VM EV+ +FRPEFINRID+I+VF  L+ KNI SIA IQL IL+ +L KM+M
Sbjct: 740 SDPAVVKMEVMAEVRNHFRPEFINRIDEIVVFHALDEKNIGSIAKIQLKILEQRLAKMDM 799

Query: 611 DLKISKAALKKISNIGFDLIYGAR 634
            L IS+A L+KI+  GFD +YGAR
Sbjct: 800 GLVISEAGLQKIAEAGFDPVYGAR 823


>gi|409405922|ref|ZP_11254384.1| ATP-dependent Clp protease subunit [Herbaspirillum sp. GW103]
 gi|386434471|gb|EIJ47296.1| ATP-dependent Clp protease subunit [Herbaspirillum sp. GW103]
          Length = 862

 Score =  924 bits (2387), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 440/620 (70%), Positives = 545/620 (87%), Gaps = 1/620 (0%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+SL SK++L LD+A LLAG KYRGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSLDMAALLAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +LKEI+ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 261 AVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           QYIEKDAA ERRFQKILV+EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RY
Sbjct: 321 QYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DRF+PDKAIDLIDEAA+KIKIEIDSKPE+MDKL+RRLIQLKIE EA+KRE DE+S+KR
Sbjct: 381 ITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLIQLKIEREAVKREKDEASQKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L LI++EI KLE +YA+LE+IWK EK+  +  QQ+KEEIEKVRL++ +ATRKSDWQ VS+
Sbjct: 441 LQLIEEEIEKLEREYADLEEIWKAEKSTAQGGQQLKEEIEKVRLQMEEATRKSDWQKVSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           LKYG+L +LE  L+ +++KD     N  K  L++T+VG+EEIAEIV+R TGIPVS+++Q 
Sbjct: 501 LKYGKLAELEAALEVQNKKDAAGVKN-EKPKLVRTQVGAEEIAEIVARATGIPVSRMMQG 559

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           EREKLL++E++L +RVVGQDEAI AVS+AIRRSR+GL D  +PYGSFMFLGPTGVGKTEL
Sbjct: 560 EREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDPSKPYGSFMFLGPTGVGKTEL 619

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L++ +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+I
Sbjct: 620 CKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVI 679

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS KI+ ME  D  
Sbjct: 680 LLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHKIQSMEDSDPA 739

Query: 555 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 614
           ++KLAVM EV+ +FRPEFINR+D+I+VF  L+ KNI +IA IQL IL+ +L K+ + L+I
Sbjct: 740 LVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAKIQLRILEQRLAKLEIGLEI 799

Query: 615 SKAALKKISNIGFDLIYGAR 634
           S+A L+KI+  GFD +YGAR
Sbjct: 800 SEAGLQKIAEAGFDPVYGAR 819


>gi|300311426|ref|YP_003775518.1| ATP-dependent Clp protease subunit [Herbaspirillum seropedicae
           SmR1]
 gi|300074211|gb|ADJ63610.1| ATP-dependent Clp protease subunit (heat-shock) protein
           [Herbaspirillum seropedicae SmR1]
          Length = 861

 Score =  921 bits (2380), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 439/620 (70%), Positives = 544/620 (87%), Gaps = 1/620 (0%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+SL SK++L LD+A LLAG KYRGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSLDMAALLAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +LKEI+ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 261 AVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           QYIEKDAA ERRFQKILV+EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RY
Sbjct: 321 QYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DRF+PDKAIDLIDEAA+KIKIEIDSKPE+MDKL+RRLIQLKIE EA+KRE DE+S+KR
Sbjct: 381 ITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLIQLKIEREAVKREKDEASQKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L LI++EI KLE +YA+LE+IWK EK+  +  QQ+KEEIEKVRL++ +ATRKSDWQ VS+
Sbjct: 441 LQLIEEEIEKLEREYADLEEIWKAEKSSAQGGQQLKEEIEKVRLQMEEATRKSDWQKVSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           LKYG+L +LE  L+ +++KD        K  L++T+VG+EEIAEIV+R TGIPVS+++Q 
Sbjct: 501 LKYGKLAELEAALEVQNKKDA-AGVKTEKPKLVRTQVGAEEIAEIVARATGIPVSRMMQG 559

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           EREKLL++E++L +RVVGQDEAI AVS+AIRRSR+GL D  +PYGSFMFLGPTGVGKTEL
Sbjct: 560 EREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDPSKPYGSFMFLGPTGVGKTEL 619

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L++ +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+I
Sbjct: 620 CKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVI 679

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS KI+ ME  D  
Sbjct: 680 LLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHKIQSMEDSDPA 739

Query: 555 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 614
           ++KLAVM EV+ +FRPEFINR+D+I+VF  L+ KNI +IA IQL IL+ +L K+ + L+I
Sbjct: 740 LVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAKIQLRILEQRLAKLEIGLEI 799

Query: 615 SKAALKKISNIGFDLIYGAR 634
           S+A L+KI+  GFD +YGAR
Sbjct: 800 SEAGLQKIAEAGFDPVYGAR 819


>gi|329912608|ref|ZP_08275778.1| ClpB protein [Oxalobacteraceae bacterium IMCC9480]
 gi|327545580|gb|EGF30751.1| ClpB protein [Oxalobacteraceae bacterium IMCC9480]
          Length = 867

 Score =  920 bits (2378), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/620 (68%), Positives = 543/620 (87%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+SL SK++L LD+A L+AG KYRGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSLDMAALVAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +LK+++ ++   I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 261 AVLKDLAKDEGQTIVFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           +YIEKDAA ERRFQKILV EP +E TI+ILRGLQ++YEVHHGV+ITDPAIVAA+ELS+RY
Sbjct: 321 KYIEKDAALERRFQKILVAEPSVEATIAILRGLQERYEVHHGVDITDPAIVAAAELSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DRF+PDKAIDLIDEAAAK+KIEIDS+PE+MDKL+RR IQLKIE EAIK+E DE+S++R
Sbjct: 381 ITDRFLPDKAIDLIDEAAAKVKIEIDSRPEVMDKLDRRTIQLKIEREAIKKEKDEASQRR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L LI++EI + E +YA+LE+IW+ EK  ++ SQ IKEEIE+VRL++++ATRKSDW+TVS+
Sbjct: 441 LALIEEEILRSEREYADLEEIWRAEKAAVQGSQHIKEEIEEVRLQMDEATRKSDWKTVSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG+L +LE+ L+ +S++D Q      K  LL+T+VG+EEIAEIVSR TGIPVSK++Q 
Sbjct: 501 LQYGKLPELEKALEAQSRQDEQADKANTKPRLLRTQVGAEEIAEIVSRATGIPVSKMMQG 560

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           ER+KL+++E+ L +RV+GQ EAI AVS+AIRRSR+GLSD  RPYGSFMFLGPTGVGKTEL
Sbjct: 561 ERDKLVHMEDFLHQRVIGQHEAIVAVSDAIRRSRAGLSDPNRPYGSFMFLGPTGVGKTEL 620

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L+  +F+ EES+IRIDMSEF+EKHS++RLIGAPPGY+GY+EGG+LTE VRR+PYS+I
Sbjct: 621 CKALAGFLFDTEESMIRIDMSEFMEKHSVARLIGAPPGYVGYDEGGFLTEAVRRRPYSVI 680

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDE+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS KI+ ME+ +  
Sbjct: 681 LLDEVEKAHQDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHKIQAMEESEPA 740

Query: 555 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 614
           ++K+AVM EV+ +FRPEFINRID+I+VF  L+ K+I +IA IQL IL+ +L KM M L I
Sbjct: 741 VVKMAVMAEVRQHFRPEFINRIDEIVVFHALDEKHIGAIARIQLKILEQRLGKMEMRLDI 800

Query: 615 SKAALKKISNIGFDLIYGAR 634
           + AAL+KI+  GFD +YGAR
Sbjct: 801 TDAALQKIAEAGFDPVYGAR 820


>gi|415902608|ref|ZP_11552111.1| Heat-shock protein, ATP-dependent Clp protease subunit
           [Herbaspirillum frisingense GSF30]
 gi|407763849|gb|EKF72441.1| Heat-shock protein, ATP-dependent Clp protease subunit
           [Herbaspirillum frisingense GSF30]
          Length = 852

 Score =  920 bits (2377), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/620 (70%), Positives = 544/620 (87%), Gaps = 1/620 (0%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+SL SK++L LD+A LLAG KYRGEFE+RLK
Sbjct: 192 NPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSLDMAALLAGAKYRGEFEERLK 251

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +LKEI+ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 252 AVLKEIAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYR 311

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           QYIEKDAA ERRFQKILV+EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RY
Sbjct: 312 QYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRY 371

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DRF+PDKAIDLIDEAA+KIKIEIDSKPE+MDKL+RRLIQLKIE EA+KRE DE+S+KR
Sbjct: 372 ITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLIQLKIEREAVKREKDEASQKR 431

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L LI++EI KLE +YA+LE+IWK EK+  +  QQ+KEEIEKVRL++ +ATRKSDWQ VS+
Sbjct: 432 LQLIEEEIEKLEREYADLEEIWKAEKSTAQGGQQLKEEIEKVRLQMEEATRKSDWQKVSE 491

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           LKYG+L +LE  L+ +++KD        K  L++T+VG+EEIAEIV+R TGIPVS+++Q 
Sbjct: 492 LKYGKLAELEAALEVQNKKDA-AGATTEKPKLVRTQVGAEEIAEIVARATGIPVSRMMQG 550

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           EREKLL++E++L +RVVGQ+EAI AVS+AIRRSR+GL D  +PYGSFMFLGPTGVGKTEL
Sbjct: 551 EREKLLHMEDVLHERVVGQEEAIVAVSDAIRRSRAGLGDPSKPYGSFMFLGPTGVGKTEL 610

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L++ +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+I
Sbjct: 611 CKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVI 670

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS +I+ ME  D  
Sbjct: 671 LLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHRIQSMEDSDPA 730

Query: 555 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 614
           ++KLAVM EV+ +FRPEFINR+D+I+VF  L+ KNI +IA IQL IL+ +L K+ + L+I
Sbjct: 731 LVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAKIQLRILEQRLAKLEIGLQI 790

Query: 615 SKAALKKISNIGFDLIYGAR 634
           S+A L+KI+  GFD +YGAR
Sbjct: 791 SEAGLQKIAEAGFDPVYGAR 810


>gi|124483534|emb|CAM32640.1| ATP-dependent Clp protease subunit (heat-shock) protein
           [Herbaspirillum seropedicae]
          Length = 861

 Score =  915 bits (2366), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 437/620 (70%), Positives = 542/620 (87%), Gaps = 1/620 (0%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+SL SK++L LD+A LLAG KYRGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKSKRVLSLDMAALLAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +LKEI+ ++   I+FIDELHTM+G G  EG++DAGNMLKP L+R ELHC+GATTL+EYR
Sbjct: 261 AVLKEIAQDEGQTIVFIDELHTMVGAGYAEGAMDAGNMLKPALARAELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           QYIEKDAA ERRFQKILV+EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RY
Sbjct: 321 QYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DRF+PDKAIDLIDEAA+KIKIEIDSKPE+MDKL+RRLIQLKIE EA+KRE DE+S+KR
Sbjct: 381 ITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLDRRLIQLKIEREAVKREKDEASQKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L LI++EI KLE +YA+LE+IWK EK+  +  QQ+KEEIEKVRL++ +ATRKSDWQ VS+
Sbjct: 441 LQLIEEEIEKLEREYADLEEIWKAEKSSAQGGQQLKEEIEKVRLQMEEATRKSDWQKVSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           LKYG+L +LE  L+ +++KD        K  L++T+VG+EEIAEIV+R TGIPVS+++Q 
Sbjct: 501 LKYGKLAELEAALEVQNKKDA-AGVKTEKPKLVRTQVGAEEIAEIVARATGIPVSRMMQG 559

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           EREKLL++E++L +RVVGQDEAI AVS+AIRRSR+GL D  +PYGSFMFLGPTGVGKTEL
Sbjct: 560 EREKLLHMEDVLHERVVGQDEAIVAVSDAIRRSRAGLGDPSKPYGSFMFLGPTGVGKTEL 619

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L++ +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+I
Sbjct: 620 CKALASYLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVI 679

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS KI+ ME  D  
Sbjct: 680 LLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHKIQSMEDSDPA 739

Query: 555 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 614
           ++KLAVM EV+ +FRPEFINR+D+I+VF  L+ KNI +IA IQL IL+ +L K+ + L+I
Sbjct: 740 LVKLAVMAEVRTHFRPEFINRVDEIVVFHALDAKNIGAIAKIQLRILEQRLAKLEIGLEI 799

Query: 615 SKAALKKISNIGFDLIYGAR 634
           S+A L+KI+  GFD +YGAR
Sbjct: 800 SEAGLQKIAEAGFDPVYGAR 819


>gi|82702670|ref|YP_412236.1| ATPase with chaperone activity [Nitrosospira multiformis ATCC
           25196]
 gi|82410735|gb|ABB74844.1| ATPase with chaperone activity [Nitrosospira multiformis ATCC
           25196]
          Length = 869

 Score =  908 bits (2347), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/621 (67%), Positives = 532/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  KK+L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKDKKVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKEI+     +I+FIDELHTM+G GK EG+IDAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLKEIAQAGGSVIVFIDELHTMVGAGKAEGAIDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ VEEP +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVFVEEPTVEATIAILRGLQERYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+I++EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAAARIRMEIDSKPEAMDRLDRRLIQLKIEREAVKKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L++ EI KLE +YA+LE+IWK EK+ ++ +Q IKEE+EKV+L+I  ATRK DWQ VS
Sbjct: 440 RLALLEDEIAKLEREYADLEEIWKAEKSQVQGTQHIKEEMEKVKLEIEAATRKGDWQKVS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG L +LE  L+ + ++  +     NK  LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 500 ELQYGRLPQLEAQLQMQDRQAEKETVEQNKPKLLRTQVGAEEIAEVVSRATGIPVSKMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E  L +RVVGQDEA+  VS+AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLHMEEKLHERVVGQDEAVRLVSDAIRRSRAGLADPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LC+ L+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPY++
Sbjct: 620 LCRALAGFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYAV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I++M   D 
Sbjct: 680 ILLDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMAGDDY 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           ++IKLAVM EVK YFRPEFINRID+++VF  L+ K+I SIA IQL  L+ +L K+ M LK
Sbjct: 740 QVIKLAVMGEVKAYFRPEFINRIDEVVVFHALDEKHIKSIARIQLQQLERRLAKLEMHLK 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++ AAL +++  GFD ++GAR
Sbjct: 800 VTDAALAEVAQAGFDPVFGAR 820


>gi|152979798|ref|YP_001353008.1| ATP-dependent Clp protease ATP-binding subunit ClpB
           [Janthinobacterium sp. Marseille]
 gi|151279875|gb|ABR88285.1| ATP-dependent Clp protease ATP-binding subunit ClpB
           [Janthinobacterium sp. Marseille]
          Length = 859

 Score =  904 bits (2336), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/620 (68%), Positives = 532/620 (85%), Gaps = 4/620 (0%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+SL  K++L LD+A LLAG KYRGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKGKRVLSLDMASLLAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L E++ ++   I+FIDE+HT++G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 261 AVLTELAEDEGQTIVFIDEMHTLVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           +YIEKDAA ERRFQKI+V EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RY
Sbjct: 321 KYIEKDAALERRFQKIIVAEPTVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DRF+PDKAIDLIDEAA+KIKIE+DSKPE+MDKL+RR+IQLKIE EAIK+E DE+S+KR
Sbjct: 381 ITDRFLPDKAIDLIDEAASKIKIELDSKPEVMDKLDRRVIQLKIEREAIKKEKDEASQKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L LI++EI +L  +YA+LE+IWK EK+  + SQ IKEEIEKVRL++ +ATRKSDWQ VS+
Sbjct: 441 LALIEEEIERLGREYADLEEIWKAEKSSAQGSQHIKEEIEKVRLQMEEATRKSDWQRVSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+Y  L +LE  LK   + ++    +A K  L++T+VG+EEIAE+VSR TGIPVS+++  
Sbjct: 501 LQYSTLPQLEAQLKNAVKGEV----SAGKPQLVRTQVGAEEIAEVVSRATGIPVSRMMTG 556

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           EREKLL +E+ L KRVVGQ EAI AVS+AIRRSR+GL D  RPYGSFMFLGPTGVGKTEL
Sbjct: 557 EREKLLQMEDALHKRVVGQHEAIVAVSDAIRRSRAGLGDPDRPYGSFMFLGPTGVGKTEL 616

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L++ +F+ E+S+IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPY +I
Sbjct: 617 CKALASFMFDTEDSLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYCVI 676

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS KI+ ME  +  
Sbjct: 677 LLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHKIQSMEGNEPA 736

Query: 555 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 614
           +IK+AVM EV+ +FRPEFINRID+I+ F  L+ KNI SIA IQL +L+ +L +M+M + +
Sbjct: 737 LIKMAVMAEVQGHFRPEFINRIDEIVAFHALDEKNIGSIAKIQLQVLEKRLARMDMSMDV 796

Query: 615 SKAALKKISNIGFDLIYGAR 634
           S+ AL+KI+  GFD +YGAR
Sbjct: 797 SEDALQKIAEAGFDPVYGAR 816


>gi|253995931|ref|YP_003047995.1| ATP-dependent chaperone ClpB [Methylotenera mobilis JLW8]
 gi|253982610|gb|ACT47468.1| ATP-dependent chaperone ClpB [Methylotenera mobilis JLW8]
          Length = 863

 Score =  904 bits (2336), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 429/669 (64%), Positives = 547/669 (81%), Gaps = 12/669 (1%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL  KK+L LD+A LLAG KYRGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKGKKVLSLDMAALLAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +LKE++ ++   I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 261 SVLKELAQDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           +YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RY
Sbjct: 321 KYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DRF+PDKAIDLIDEAA++IK+EIDSKPE+MDKLERRLIQLKIE EA++RE DE SKKR
Sbjct: 381 ITDRFLPDKAIDLIDEAASRIKMEIDSKPEVMDKLERRLIQLKIEREAVRREKDEGSKKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
             LI+ EI+KLE +YA+LE+IWK EK  ++ S  IKE IEKV+ ++ +ATRK DWQ VS+
Sbjct: 441 FELIEDEISKLEKEYADLEEIWKSEKAQVQGSAHIKEAIEKVKFEMEEATRKGDWQKVSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG+L +LE  LK+ S  ++ +  + +K  +L+T+VG++EIAE+VSR TGIPVSK++  
Sbjct: 501 LQYGKLPQLETQLKQASTAEVSV--DLSKHKMLRTEVGADEIAEVVSRATGIPVSKMMTG 558

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           EREKLL +E  L +RVVGQDEA+  VS+AIRRSRSGL D  RPYGSF+FLGPTGVGKTEL
Sbjct: 559 EREKLLTMEAKLHERVVGQDEAVRLVSDAIRRSRSGLGDPNRPYGSFLFLGPTGVGKTEL 618

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK+L+  +F++EE +IRIDMSEF+EKHS++R+IGAPPGY+GYEEGG LTE VRRKPYS+I
Sbjct: 619 CKSLANFLFDSEEHLIRIDMSEFMEKHSVARMIGAPPGYVGYEEGGTLTEAVRRKPYSVI 678

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGS  I+ M   D +
Sbjct: 679 LLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSQMIQSMSDQDYQ 738

Query: 555 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 614
           ++KLAVM EVK +FRPEF+NRID+++VF  L  +NI SIA IQL  L  +L  M+M L++
Sbjct: 739 LVKLAVMGEVKTHFRPEFVNRIDEVVVFHALGEENIKSIAAIQLQYLAKRLAAMDMQLEL 798

Query: 615 SKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSLD 674
           + AA+ +I+N GFD +YGAR +    +S          ++P A  I  G+ I K    +D
Sbjct: 799 TDAAIAEIANAGFDPVYGARPLKRAIQS--------EIENPLAREILAGNFIAKDTVKID 850

Query: 675 TL--RMVYS 681
               ++V+S
Sbjct: 851 VRAGKLVFS 859


>gi|134095329|ref|YP_001100404.1| ATP-dependent protease Hsp 100 [Herminiimonas arsenicoxydans]
 gi|133739232|emb|CAL62281.1| Chaperone protein ClpB [Herminiimonas arsenicoxydans]
          Length = 860

 Score =  904 bits (2336), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 422/620 (68%), Positives = 530/620 (85%), Gaps = 4/620 (0%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL  K++L LD+A LLAG KYRGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKGKRVLSLDMASLLAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L E++ ++   I+FIDE+HT++G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 261 AVLTELAEDEGQTIVFIDEMHTLVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           +YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+RY
Sbjct: 321 KYIEKDAALERRFQKVLVDEPTVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DRF+PDKAIDLIDEAAAKIKIEIDSKPE+MD+L+RR+IQLKIE EAI++E DE+S+KR
Sbjct: 381 ITDRFLPDKAIDLIDEAAAKIKIEIDSKPEVMDRLDRRVIQLKIEREAIRKEKDEASQKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L LI++EI KL  +YA+LE+IWK EK+  + SQ IKE IEK RL++ +ATR+SDWQ VS+
Sbjct: 441 LALIEEEIEKLGREYADLEEIWKAEKSAAQGSQHIKEAIEKARLQMEEATRQSDWQRVSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+Y  L +LE  LK      +    +A K  L++T+VG+EEIAE+VSR TGIPVS+++Q 
Sbjct: 501 LQYKTLPELEAQLKNA----VTGEASAGKPQLVRTQVGAEEIAEVVSRATGIPVSRMMQG 556

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           EREKLL +E+ L KRVVGQ EAI AVS+AIRRSR+GL D  RPYGSFMFLGPTGVGKTEL
Sbjct: 557 EREKLLQMEDALHKRVVGQHEAIVAVSDAIRRSRAGLGDPDRPYGSFMFLGPTGVGKTEL 616

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L++ +F+ E+S++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPY +I
Sbjct: 617 CKALASFLFDTEDSLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYCVI 676

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS KI+ ME  +  
Sbjct: 677 LLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHKIQAMEGNEPA 736

Query: 555 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 614
           +IK+AVM EV+ +FRPEFINRID+I+VF  L+ KNI +IA IQL+ L+ +L +M+M + +
Sbjct: 737 LIKMAVMAEVQSHFRPEFINRIDEIVVFHALDEKNIGAIAKIQLHTLEQRLARMDMSMDV 796

Query: 615 SKAALKKISNIGFDLIYGAR 634
           S+ AL+KI+  GFD +YGAR
Sbjct: 797 SEDALQKIAEAGFDPVYGAR 816


>gi|339482101|ref|YP_004693887.1| ATP-dependent chaperone ClpB [Nitrosomonas sp. Is79A3]
 gi|338804246|gb|AEJ00488.1| ATP-dependent chaperone ClpB [Nitrosomonas sp. Is79A3]
          Length = 871

 Score =  899 bits (2323), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 425/626 (67%), Positives = 529/626 (84%), Gaps = 5/626 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP SL  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPESLKDKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLKELAQDEGKTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LVEEP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS R
Sbjct: 320 RKYIEKDAALERRFQKVLVEEPTVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+I++EIDSKPE +DKL+RRLIQLKIE EAIK+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAAARIRMEIDSKPEALDKLDRRLIQLKIEREAIKKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L+++EI + E +YA+L++IWK EK  ++ SQQIKEE+EK+RL+I  ATRK DWQ VS
Sbjct: 440 RLQLLEEEIKQKEREYADLDEIWKTEKFHVQGSQQIKEEMEKIRLEIEAATRKGDWQKVS 499

Query: 314 KLKYGELNKLERILK-----EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPV 368
           +L+YG L +LE  L+     +K Q        A    LL+T+VG+EEIAE+VSR TGIPV
Sbjct: 500 ELQYGRLPQLEAQLQSQLNAQKQQTGATESGAAAAPKLLRTQVGAEEIAEVVSRATGIPV 559

Query: 369 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 428
           SK++Q EREKLL +E  L  RVVGQDEA+  VS+AIRRSR+GL+D  RPYGSF+FLGPTG
Sbjct: 560 SKMMQGEREKLLLMEQKLHDRVVGQDEAVRLVSDAIRRSRAGLADPNRPYGSFLFLGPTG 619

Query: 429 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 488
           VGKTELCK L+  +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTEIVRR
Sbjct: 620 VGKTELCKALAGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEIVRR 679

Query: 489 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 548
           KPY++ILLDE+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+EM
Sbjct: 680 KPYAVILLDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQEM 739

Query: 549 EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKM 608
              + + IK AVM EVK +FRPEFINRID+++VF  L+ K+I SIA IQL+ L+ +L K+
Sbjct: 740 SGSEYQAIKEAVMGEVKTHFRPEFINRIDEVVVFHALDEKHIKSIARIQLHYLETRLAKL 799

Query: 609 NMDLKISKAALKKISNIGFDLIYGAR 634
            M L++S+AAL  +S  GFD +YGAR
Sbjct: 800 EMKLEVSEAALAALSQAGFDPVYGAR 825


>gi|56479246|ref|YP_160835.1| ClpB protein [Aromatoleum aromaticum EbN1]
 gi|56315289|emb|CAI09934.1| ClpB protein [Aromatoleum aromaticum EbN1]
          Length = 860

 Score =  898 bits (2320), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/621 (67%), Positives = 528/621 (85%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKEI+  +  II+FIDELHTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLKEIAQEEGRIIVFIDELHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVESTIAILRGLQEKYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE+MDKLERRLIQLKIE EA+KRE DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAAARIKMEIDSKPEVMDKLERRLIQLKIEQEAVKRETDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL+LI+ EI+KLE +YANL++IW+ EK  ++ SQ IKEEIE +R ++ +  RK  +  ++
Sbjct: 440 RLVLIRDEIDKLEREYANLDEIWRSEKASVQGSQHIKEEIEALRTQMAEMQRKGQYDKLA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK          +   KF LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 500 ELQYGKLPQLEAQLKAAESAG----SGERKFKLLRTEVGTEEIAEVVSRATGIPVSKMMQ 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RVVGQDEA+  V++AIRRSR+GLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 556 GEREKLLKMEERLHQRVVGQDEAVRLVADAIRRSRAGLSDENRPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKTLAEFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           IL DE+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I++M   D 
Sbjct: 676 ILFDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMAGDDH 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           ++IKLAVM EVK YFRPEF+NRID+++VF  L+ K+I SIA IQL  L  +L +++M ++
Sbjct: 736 QVIKLAVMAEVKTYFRPEFVNRIDEVVVFHALDEKHIASIARIQLQYLDKRLARLDMSME 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL ++++ GFD ++GAR
Sbjct: 796 VSDAALAELASAGFDPVFGAR 816


>gi|119897857|ref|YP_933070.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Azoarcus sp.
           BH72]
 gi|119670270|emb|CAL94183.1| probable ATP-dependent Clp protease, ATP-binding subunit ClpB
           [Azoarcus sp. BH72]
          Length = 860

 Score =  896 bits (2315), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/621 (67%), Positives = 529/621 (85%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP +L  KK+L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPETLKGKKVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+I+ ++  II+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLKDIAQDEGRIILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPTVESTIAILRGLQEKYEVHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE+MDKLERRLIQLKIE EA+KRE DE+S++
Sbjct: 380 YITDRFLPDKAIDLIDEAAARIKMEIDSKPEVMDKLERRLIQLKIEQEAVKRETDEASQR 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RLLLI+ EI+KLE +YANL+++W+ EK  ++ SQ IKEEIEK+R ++ +  RK  +  ++
Sbjct: 440 RLLLIRDEIDKLEREYANLDEVWRSEKASVQGSQHIKEEIEKLRAQMAEMQRKGQFDKLA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK          +   +F LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 500 ELQYGKLPQLEAQLKAAETAG----SGERQFKLLRTQVGAEEIAEVVSRATGIPVSKMMQ 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RVVGQDEA+  VS+AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLKMEERLHGRVVGQDEAVRLVSDAIRRSRAGLADENRPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKTLAEFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           IL DE+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I++M   D 
Sbjct: 676 ILFDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMSGDDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           ++IKLAVM EVK +FRPEFINRID+++VF  L+ KNI  IA IQL  L+ +L K++M ++
Sbjct: 736 QVIKLAVMAEVKTFFRPEFINRIDEVVVFHALDEKNIAGIARIQLKYLEKRLAKLDMSME 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL +I++ GFD ++GAR
Sbjct: 796 VSDAALAEIASAGFDPVFGAR 816


>gi|394988952|ref|ZP_10381787.1| ATP-dependent chaperone ClpB [Sulfuricella denitrificans skB26]
 gi|393792331|dbj|GAB71426.1| ATP-dependent chaperone ClpB [Sulfuricella denitrificans skB26]
          Length = 870

 Score =  895 bits (2314), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/621 (66%), Positives = 534/621 (85%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP +L  K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPETLKGKRVLVLDMAGLLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+   +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLKEVGQEEGQVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKDAA ERRFQK+LV+EP +E+TI+ILRGLQ+KYE+HHGV+ITDPAI+AA+ELS+R
Sbjct: 320 RKYVEKDAALERRFQKVLVDEPSVEDTIAILRGLQEKYELHHGVDITDPAIIAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++I++EIDSKPE+MDKL+RRLIQLKIE EA+K+E DE+SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIRMEIDSKPEVMDKLDRRLIQLKIEREAVKKEKDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL+L+ +EI KL+ +Y +LE+IWK EK  ++ SQ IKEE+++++++++ ATRK +WQ VS
Sbjct: 440 RLVLLDQEIVKLQREYNDLEEIWKAEKAQVQGSQHIKEELDRLKVEMDAATRKGEWQKVS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG++ +LE  LK     D  +P +     LL+T+VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 EIQYGKIPQLEAQLKHADTADEAMPAH----QLLRTQVGAEEIAEVVSRATGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL++E+ L +RVVGQDEA+  VS+AIRRSR+GL D  RPYGSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLHMEDQLHQRVVGQDEAVRLVSDAIRRSRAGLGDPNRPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IRIDMSEF+E+HS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALAGFLFDSEEHLIRIDMSEFMERHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I++ME  D 
Sbjct: 676 ILLDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMEGDDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           +++KLAVM EVK YFRPEFINRID+++VF  L+ +NI SIA IQL  L  +L  M M L+
Sbjct: 736 QVVKLAVMAEVKSYFRPEFINRIDEVVVFHALDEENIKSIAGIQLQYLTKRLAAMEMKLE 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL +++  GFD ++GAR
Sbjct: 796 VSDAALTELAAAGFDPVFGAR 816


>gi|91776550|ref|YP_546306.1| ATPase AAA-2 [Methylobacillus flagellatus KT]
 gi|91710537|gb|ABE50465.1| ATPase AAA-2 [Methylobacillus flagellatus KT]
          Length = 861

 Score =  893 bits (2307), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/621 (67%), Positives = 529/621 (85%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLVLDMAGLLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           + +LKE++ ++   I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 QAVLKELAQDEGKTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYEVHHGVEITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE +DKLERRLIQLKIE EA+ RE DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAAARIKMEIDSKPEALDKLERRLIQLKIEREAVHREKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI+ EI +LE +YA+LE+IWK EK  ++ S+ +KEEIEKV+L+I +ATRK +WQ VS
Sbjct: 440 RLSLIEDEIRRLEKEYADLEEIWKAEKAQVQGSKHLKEEIEKVKLQIEEATRKGEWQKVS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK+ +  + Q     ++  LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 500 ELQYGKLPQLETQLKQAASAEEQGGQKPHR--LLRTQVGAEEIAEVVSRATGIPVSKMLQ 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL++E  L +RVVGQDEA+  VS+AIRRSRSGL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLHMEEKLHERVVGQDEAVRLVSDAIRRSRSGLADPNRPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LTKALAGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGS  I+ M   + 
Sbjct: 678 ILLDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSQMIQNMSGDEY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           +++KLAVM EVK  FRPEF+NRID+++VF  L   ++ SIA IQL  L  +L  M M L 
Sbjct: 738 QVVKLAVMAEVKANFRPEFVNRIDEVVVFHALGESHVKSIARIQLQNLAKRLAAMEMHLD 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL +I+N GFD +YGAR
Sbjct: 798 VSDAALAEIANAGFDPVYGAR 818


>gi|291614661|ref|YP_003524818.1| ATP-dependent chaperone ClpB [Sideroxydans lithotrophicus ES-1]
 gi|291584773|gb|ADE12431.1| ATP-dependent chaperone ClpB [Sideroxydans lithotrophicus ES-1]
          Length = 861

 Score =  893 bits (2307), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 421/621 (67%), Positives = 530/621 (85%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KSVLKELSQDEGKNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVESTIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE+MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAAARIKMEIDSKPEVMDKLDRRLIQLKIEREAVKKEKDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R+ LI+ EI KLE +YA+LE+IWK EK   + +  +KEEI+ V+ ++    R+   + V+
Sbjct: 440 RMGLIEDEIRKLEREYADLEEIWKAEKGAAQGAANVKEEIDHVKAEMVALQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LKE +Q++ +     NK  LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 500 ELQYGKLPQLEAKLKEAAQREAEGTGTRNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQ 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RVVGQDEA+  VS+AIRRSRSGLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEDKLHERVVGQDEAVRLVSDAIRRSRSGLSDPNRPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKTLANFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVF +LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I++ME  D 
Sbjct: 678 ILLDEVEKAHPDVFGVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMEGDDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           +++KLAVM EVK YFRPEFINRID+++VF  L+ KNI SIA IQL+ L+ +L  M M L 
Sbjct: 738 QVVKLAVMGEVKNYFRPEFINRIDEVVVFHALDEKNIKSIARIQLHGLEKRLAAMEMKLD 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++ AAL +I+N GFD +YGAR
Sbjct: 798 VTDAALAEIANAGFDPVYGAR 818


>gi|297537752|ref|YP_003673521.1| ATP-dependent chaperone ClpB [Methylotenera versatilis 301]
 gi|297257099|gb|ADI28944.1| ATP-dependent chaperone ClpB [Methylotenera versatilis 301]
          Length = 863

 Score =  893 bits (2307), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/620 (66%), Positives = 522/620 (84%), Gaps = 2/620 (0%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+SL  KK+L LD+A LLAG KYRG+FE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKGKKVLSLDMAALLAGAKYRGDFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +LKE++ ++   I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 261 SVLKELAQDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           +YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RY
Sbjct: 321 KYIEKDAALERRFQKVLVDEPTVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DRF+PDKAIDLIDEAA++IK+EIDSKPE+MDKLERR+IQLKIE EA++RE DE SKKR
Sbjct: 381 ITDRFLPDKAIDLIDEAASRIKMEIDSKPEVMDKLERRMIQLKIEREAVRREKDEGSKKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
             LI++E  +LE +YA+LE IWK EK  ++ S  IKEEIEK++ ++ +ATRK +WQ VS+
Sbjct: 441 FNLIEEEFGRLEKEYADLEDIWKAEKAQVQGSAHIKEEIEKIKFEMEEATRKGEWQKVSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG+L  LE  LK+ S    +  +   K  +L+T+VG++EIAE+VSR TGIPVSK++Q 
Sbjct: 501 LQYGKLPALEAQLKQASNS--EATSTQTKHKMLRTEVGADEIAEVVSRATGIPVSKMMQG 558

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           ER KLL +E  L +RVVGQDEA+  VS+AIRRSRSGL D  RPYGSF+FLGPTGVGKTEL
Sbjct: 559 ERGKLLTMETKLHERVVGQDEAVRLVSDAIRRSRSGLGDPNRPYGSFLFLGPTGVGKTEL 618

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L+  +F++E+ +IRIDMSEF+EKHS++R+IGAPPGY+GYEEGG LTE VRRKPYS+I
Sbjct: 619 CKALAGFLFDSEDHLIRIDMSEFMEKHSVARMIGAPPGYVGYEEGGTLTEAVRRKPYSVI 678

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGS  I+ M   D +
Sbjct: 679 LLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSQMIQSMADQDYQ 738

Query: 555 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 614
           ++KLAVM EVK +FRPEF+NRID+++VF  L   NI +IA IQL  L  +L  M+M L++
Sbjct: 739 VVKLAVMGEVKAHFRPEFVNRIDEVVVFHALGEDNIKAIAEIQLQYLAKRLAAMDMQLEL 798

Query: 615 SKAALKKISNIGFDLIYGAR 634
           + AA+ +I+N GFD +YGAR
Sbjct: 799 TDAAITEIANAGFDPVYGAR 818


>gi|413962472|ref|ZP_11401699.1| ATP-dependent chaperone ClpB [Burkholderia sp. SJ98]
 gi|413928304|gb|EKS67592.1| ATP-dependent chaperone ClpB [Burkholderia sp. SJ98]
          Length = 865

 Score =  890 bits (2300), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/621 (67%), Positives = 529/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLHDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI++L  +Y++LE+IW  EK  ++ S Q+KEEIEKVR  I +  R+   + V+
Sbjct: 440 RLQLIEEEIDRLNREYSDLEEIWTAEKAAVQGSAQLKEEIEKVRADITRLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK+ +Q + Q  NN  +  LL+T+VG+EEIAE+VSR+TGIPVS+++Q
Sbjct: 500 ELQYGKLPELEARLKQVTQAESQEQNNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL IE  L +RV+GQDEAI AV++AIRRSR+GLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLQIEAKLHERVIGQDEAIGAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+A +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALAAFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQGMVGEPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AV  EVK++FRPEF+NRIDD++VF  L+R NI SIA IQL  L  +L K++MDL 
Sbjct: 740 ERVKDAVWEEVKLHFRPEFLNRIDDVVVFHALDRTNIESIAKIQLARLHERLAKLDMDLD 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL +I  +G+D ++GAR
Sbjct: 800 VSDAALAQIGKVGYDPLFGAR 820


>gi|206560283|ref|YP_002231047.1| ClpB heat-shock protein [Burkholderia cenocepacia J2315]
 gi|444358706|ref|ZP_21160085.1| ATP-dependent chaperone protein ClpB [Burkholderia cenocepacia BC7]
 gi|444365745|ref|ZP_21165861.1| ATP-dependent chaperone protein ClpB [Burkholderia cenocepacia
           K56-2Valvano]
 gi|198036324|emb|CAR52220.1| ClpB heat-shock protein [Burkholderia cenocepacia J2315]
 gi|443603407|gb|ELT71418.1| ATP-dependent chaperone protein ClpB [Burkholderia cenocepacia BC7]
 gi|443605667|gb|ELT73504.1| ATP-dependent chaperone protein ClpB [Burkholderia cenocepacia
           K56-2Valvano]
          Length = 865

 Score =  890 bits (2299), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/621 (67%), Positives = 531/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L  +YA+LE+IW  EK  ++ S Q+KEEIEKVR  I +  R+   + V+
Sbjct: 440 RLQLIEEEIERLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK+ +Q + Q  +N  +  LL+T+VG+EEIAE+VSR+TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLESQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL+IE  L +RVVGQDEAISAV++AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLHIEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKAN DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKANPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGSPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + IK AV  EVK +FRPEF+NRIDD++VF  L+R NI SIA IQL  L ++L K++M L 
Sbjct: 740 DEIKDAVWLEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALD 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL++I+ +G+D ++GAR
Sbjct: 800 VSPAALEQIAKVGYDPVFGAR 820


>gi|107028974|ref|YP_626069.1| ATPase AAA-2 [Burkholderia cenocepacia AU 1054]
 gi|116689868|ref|YP_835491.1| ATPase [Burkholderia cenocepacia HI2424]
 gi|105898138|gb|ABF81096.1| ATPase AAA-2 [Burkholderia cenocepacia AU 1054]
 gi|116647957|gb|ABK08598.1| ATPase AAA-2 domain protein [Burkholderia cenocepacia HI2424]
          Length = 865

 Score =  889 bits (2298), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/621 (67%), Positives = 532/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI++L  +YA+LE+IW  EK  ++ S Q+KEEIEKVR  I +  R+   + V+
Sbjct: 440 RLQLIEEEIDRLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK+ +Q + Q  +N  +  LL+T+VG+EEIAE+VSR+TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLEAQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL+IE  L +RVVGQDEAISAV++AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLHIEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGAPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + IK AV  EVK +FRPEF+NRIDD++VF  L+R NI SIA IQL  L ++L K++M L 
Sbjct: 740 DEIKDAVWLEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALD 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL++I+ +G+D ++GAR
Sbjct: 800 VSPAALEQIAKVGYDPVFGAR 820


>gi|115351836|ref|YP_773675.1| ATPase [Burkholderia ambifaria AMMD]
 gi|172060806|ref|YP_001808458.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria MC40-6]
 gi|115281824|gb|ABI87341.1| ATPase AAA-2 domain protein [Burkholderia ambifaria AMMD]
 gi|171993323|gb|ACB64242.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria MC40-6]
          Length = 865

 Score =  889 bits (2297), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/621 (67%), Positives = 531/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI++L  +YA+LE+IW  EK  ++ S Q+KEEIEKVR  I +  R+   + V+
Sbjct: 440 RLQLIEEEIDRLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIVRLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK+ +Q + Q  +N  +  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLESQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL+IE  L +RVVGQDEAISAV++AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLHIEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGAPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV  EVK +FRPEF+NRIDD++VF  L+R NI SIA IQL  L ++L K++M L 
Sbjct: 740 EEIKDAVWIEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALD 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL++I+ +G+D ++GAR
Sbjct: 800 VSPAALEQIAKVGYDPVFGAR 820


>gi|170703405|ref|ZP_02894181.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria IOP40-10]
 gi|170131681|gb|EDT00233.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria IOP40-10]
          Length = 865

 Score =  889 bits (2296), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/621 (67%), Positives = 531/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI++L  +YA+LE+IW  EK  ++ S Q+KEEIEKVR  I +  R+   + V+
Sbjct: 440 RLQLIEEEIDRLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIVRLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK+ +Q + Q  +N  +  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLESQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL+IE  L +RVVGQDEAISAV++AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLHIEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGAPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV  EVK +FRPEF+NRIDD++VF  L+R NI SIA IQL  L ++L K++M L 
Sbjct: 740 EEIKDAVWIEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALD 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL++I+ +G+D ++GAR
Sbjct: 800 VSPAALEQIAKVGYDPVFGAR 820


>gi|421866946|ref|ZP_16298608.1| ClpB protein [Burkholderia cenocepacia H111]
 gi|358073110|emb|CCE49486.1| ClpB protein [Burkholderia cenocepacia H111]
          Length = 865

 Score =  888 bits (2295), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/621 (67%), Positives = 531/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L  +YA+LE+IW  EK  ++ S Q+KEEIEKVR  I +  R+   + V+
Sbjct: 440 RLQLIEEEIERLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK+ +Q + Q  +N  +  LL+T+VG+EEIAE+VSR+TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLESQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL+IE  L +RVVGQDEAISAV++AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLHIEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGSPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + IK AV  EVK +FRPEF+NRIDD++VF  L+R NI SIA IQL  L ++L K++M L 
Sbjct: 740 DEIKDAVWLEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALD 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL++I+ +G+D ++GAR
Sbjct: 800 VSPAALEQIAKVGYDPVFGAR 820


>gi|170733207|ref|YP_001765154.1| ATP-dependent chaperone ClpB [Burkholderia cenocepacia MC0-3]
 gi|169816449|gb|ACA91032.1| ATP-dependent chaperone ClpB [Burkholderia cenocepacia MC0-3]
          Length = 865

 Score =  888 bits (2295), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/621 (66%), Positives = 532/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI++L  +YA+LE+IW  EK  ++ S Q+KE+IEKVR  I +  R+   + V+
Sbjct: 440 RLQLIEEEIDRLGREYADLEEIWTAEKAAVQGSAQLKEDIEKVRADIARLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK+ +Q + Q  +N  +  LL+T+VG+EEIAE+VSR+TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLEAQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL+IE  L +RVVGQDEAISAV++AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLHIEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGAPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + IK AV  EVK +FRPEF+NRIDD++VF  L+R NI SIA IQL  L ++L K++M L 
Sbjct: 740 DEIKDAVWLEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALD 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL++I+ +G+D ++GAR
Sbjct: 800 VSPAALEQIAKVGYDPVFGAR 820


>gi|254248039|ref|ZP_04941360.1| ATPase with chaperone activity, ATP-binding subunit [Burkholderia
           cenocepacia PC184]
 gi|124872815|gb|EAY64531.1| ATPase with chaperone activity, ATP-binding subunit [Burkholderia
           cenocepacia PC184]
          Length = 865

 Score =  887 bits (2293), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/621 (66%), Positives = 532/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI++L  +YA+LE+IW  EK  ++ S Q+KEEIEKVR  I +  R+   + V+
Sbjct: 440 RLQLIEEEIDRLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +L+  LK+ +Q + Q  +N  +  LL+T+VG+EEIAE+VSR+TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLDAQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL+IE  L +RVVGQDEAISAV++AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLHIEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGAPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + IK AV  EVK +FRPEF+NRIDD++VF  L+R NI SIA IQL  L ++L K++M L 
Sbjct: 740 DEIKDAVWLEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALD 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL++I+ +G+D ++GAR
Sbjct: 800 VSPAALEQIAKVGYDPVFGAR 820


>gi|358636852|dbj|BAL24149.1| ClpB protein [Azoarcus sp. KH32C]
          Length = 859

 Score =  887 bits (2293), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/621 (67%), Positives = 527/621 (84%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNAEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKEI+  +  II+FIDE+HTM+G GK EG+IDAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KSVLKEIAQEEGQIIVFIDEIHTMVGAGKAEGAIDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LVEEP +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVEEPSVESTIAILRGLQERYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE+MDKLERRLIQLKIE EA+KRE DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAAARIKMEIDSKPEVMDKLERRLIQLKIEQEAVKRETDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL+LI+ EI KLE +YANL++IW+ EK  ++ SQ IKEEI+K+R ++ +  RK  +  ++
Sbjct: 440 RLVLIRDEIEKLEREYANLDEIWRSEKASVQGSQHIKEEIDKLRAQMAEMQRKGQYDKLA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK   +      +   KF LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 500 ELQYGKLPQLEAQLKVAEEAG----SGERKFKLLRTQVGTEEIAEVVSRATGIPVSKMMQ 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RVVGQDEA+  VS+AIRRSR+GLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 556 GEREKLLRMEERLHSRVVGQDEAVRLVSDAIRRSRAGLSDENRPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IR+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALAEFLFDSEEHLIRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           IL DE+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I++M   D 
Sbjct: 676 ILFDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMSGDDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           ++IKLAVM EVK +FRPEF+NRID+++VF  L+ K+I SIA IQL  L+ +L +++M L+
Sbjct: 736 QVIKLAVMAEVKTFFRPEFVNRIDEVVVFHALDEKHIASIARIQLQYLERRLARLDMTLQ 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++ AAL +++  GFD I+GAR
Sbjct: 796 VTDAALAELAAAGFDPIFGAR 816


>gi|330817193|ref|YP_004360898.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
           gladioli BSR3]
 gi|327369586|gb|AEA60942.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
           gladioli BSR3]
          Length = 865

 Score =  887 bits (2291), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/621 (66%), Positives = 532/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KSVLNDIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK++V+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVIVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPESMDKLDRRLIQLKIEREAVKKEQDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L  +YA+LE+IW  EK  ++ S Q+KE+I++VR +I K  R+   + V+
Sbjct: 440 RLQLIEEEIERLGREYADLEEIWTAEKAAVQGSAQLKEDIDRVRAEIAKLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK+ +Q + Q  +N +K  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLEAQLKQVTQAEEQEQHNPSKPRLLRTQVGTEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL+IE  L +RV+GQDEAISAV++AIRRSR+GLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLHIEEKLHERVIGQDEAISAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALAGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSMVGSPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E++K AV  EVK++FRPEF+NRIDD++VF  L+R NI SIA IQL  L  +L K++M L+
Sbjct: 740 EVVKDAVWEEVKLHFRPEFLNRIDDVVVFHALDRSNIQSIAKIQLARLHERLAKLDMQLE 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++ AAL +I  +G+D ++GAR
Sbjct: 800 VTDAALDQIGKVGYDPLFGAR 820


>gi|377821024|ref|YP_004977395.1| ATP-dependent chaperone ClpB [Burkholderia sp. YI23]
 gi|357935859|gb|AET89418.1| ATP-dependent chaperone ClpB [Burkholderia sp. YI23]
          Length = 865

 Score =  885 bits (2288), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/621 (66%), Positives = 530/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGMTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L  +Y++LE+IW  EK  ++ S Q+KEEIEKVR  I +  R+   + V+
Sbjct: 440 RLQLIEEEIERLNREYSDLEEIWTAEKAAVQGSAQLKEEIEKVRADITRLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK+ +Q + Q  NN  +  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPELEARLKQVTQAESQEQNNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL IE+ L +RV+GQDEAI AV++AIRRSR+GLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLQIESKLHERVIGQDEAIGAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+A +F++E+ ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALAAFLFDSEDHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQGMIGEPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AV  EVK++FRPEF+NRIDD++VF  L+R NI +IA IQL  L ++L K++M+ +
Sbjct: 740 ESVKDAVWEEVKLHFRPEFLNRIDDVVVFHALDRSNISAIAKIQLQRLHDRLAKLDMEFE 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL++I  +G+D ++GAR
Sbjct: 800 VSDAALEQIGKVGYDPVFGAR 820


>gi|171317872|ref|ZP_02907049.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria MEX-5]
 gi|171096941|gb|EDT41811.1| ATP-dependent chaperone ClpB [Burkholderia ambifaria MEX-5]
          Length = 865

 Score =  885 bits (2288), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/621 (67%), Positives = 530/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI++L  +YA+LE+IW  EK  ++ S Q+KEEIEKVR  I +  R+   + V+
Sbjct: 440 RLQLIEEEIDRLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIVRLQREGKLERVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK+ +Q + Q  +N  +  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLESQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL+IE  L +RVVGQ EAISAV++AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLHIEEKLHERVVGQHEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGAPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV  EVK +FRPEF+NRIDD++VF  L+R NI SIA IQL  L ++L K++M L 
Sbjct: 740 EEIKDAVWIEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALD 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL++I+ +G+D ++GAR
Sbjct: 800 VSPAALEQIAKVGYDPVFGAR 820


>gi|78066617|ref|YP_369386.1| ATPase AAA [Burkholderia sp. 383]
 gi|77967362|gb|ABB08742.1| AAA ATPase, ClpB [Burkholderia sp. 383]
          Length = 865

 Score =  885 bits (2288), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/621 (67%), Positives = 529/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L  +YA+LE+IW  EK  ++ S Q+KEEIEKVR  I +  R    + V+
Sbjct: 440 RLQLIEEEIERLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQRDGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK+ +Q + Q  +N  +  LL+T+VG+EEIAE+VSR+TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLEAQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL+IE  L +RVVGQ EAISAV++AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLHIEEKLHERVVGQHEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGAPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV  EVK +FRPEF+NRIDD++VF  L+R NI SIA IQL  L ++L K++M L 
Sbjct: 740 EEIKDAVWLEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALD 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+AAL++I  +G+D ++GAR
Sbjct: 800 VSEAALEQIGKVGYDPLFGAR 820


>gi|402566351|ref|YP_006615696.1| ClpB protein [Burkholderia cepacia GG4]
 gi|402247548|gb|AFQ48002.1| ClpB protein [Burkholderia cepacia GG4]
          Length = 865

 Score =  885 bits (2287), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/621 (67%), Positives = 529/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L  +YA+LE+IW  EK  ++ S Q+KEEIEKVR  I +  R+   + V+
Sbjct: 440 RLQLIEEEIERLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK+ +Q + Q  +N  +  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLESQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL+IE  L +RVVGQ EAISAV++AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLHIEEKLHERVVGQHEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMTGSPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV  EVK +FRPEF+NRIDD++VF  L+R NI SIA IQL  L ++L K++M L 
Sbjct: 740 EEIKDAVWLEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALD 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL++I+ +G+D ++GAR
Sbjct: 800 VSPAALEQIAKVGYDPVFGAR 820


>gi|350545741|ref|ZP_08915197.1| ClpB protein [Candidatus Burkholderia kirkii UZHbot1]
 gi|350526470|emb|CCD40355.1| ClpB protein [Candidatus Burkholderia kirkii UZHbot1]
          Length = 865

 Score =  885 bits (2287), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/621 (66%), Positives = 528/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEMLKNKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEKDETSQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L  +Y++LE+IW  EK  ++ S Q+KEEIEKVR  I +  R+   + V+
Sbjct: 440 RLQLIEEEIERLNREYSDLEEIWTAEKAAVQGSAQLKEEIEKVRADITRLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  L++ +Q + Q  NN  +  LL+T+VG+EEIAE+VSR+TGIPVS+++Q
Sbjct: 500 ELQYGKLPELEARLRQVTQAESQEQNNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL IE  L +RV+GQDEAI AV+NAIRRSR+GLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 560 REREKLLQIEGKLHERVIGQDEAIGAVANAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+A +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALAAFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQGMVGKPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AV  EVK++FRPEF+NRIDD++VF  L+R NI SIA IQL  L+ +L K++M L+
Sbjct: 740 EKVKDAVWEEVKLHFRPEFLNRIDDVVVFHALDRTNIESIAKIQLQRLQERLAKLDMQLE 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S A L++I  +G+D  +GAR
Sbjct: 800 VSDAVLEQIGKVGYDPHFGAR 820


>gi|170692320|ref|ZP_02883483.1| ATP-dependent chaperone ClpB [Burkholderia graminis C4D1M]
 gi|170142750|gb|EDT10915.1| ATP-dependent chaperone ClpB [Burkholderia graminis C4D1M]
          Length = 865

 Score =  885 bits (2287), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/621 (66%), Positives = 529/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EY
Sbjct: 260 KAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPTVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L+ +Y++LE+IW  EK  ++ S Q+KEEI+K R +I +  R+   + V+
Sbjct: 440 RLQLIEEEIERLDREYSDLEEIWTAEKAAVQGSAQLKEEIDKTRAEITRLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L  LE  LKE +Q + +  NN  +  LL+T+VG+EEIAE+VSR+TGIPVS+++Q
Sbjct: 500 ELQYGKLPGLEAQLKEVTQAEAKEQNNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL IE+ L +RV+GQDEAISAV++AIRRSR+GLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLQIEDKLHERVIGQDEAISAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+A +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALAAFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMVGEPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AV  EVK++FRPEF+NRIDD++VF  L+R N+ SIA IQL  L ++L K++M L 
Sbjct: 740 EAVKDAVWTEVKLHFRPEFLNRIDDVVVFHALDRSNVQSIARIQLQRLHDRLAKLDMQLV 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL+ +  +G+D ++GAR
Sbjct: 800 VSDEALEHVGKVGYDPLFGAR 820


>gi|134295878|ref|YP_001119613.1| ATPase [Burkholderia vietnamiensis G4]
 gi|134139035|gb|ABO54778.1| ATPase AAA-2 domain protein [Burkholderia vietnamiensis G4]
          Length = 865

 Score =  884 bits (2285), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/620 (67%), Positives = 527/620 (85%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  K++L LD+A LLAG KYRGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR
Sbjct: 261 SVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           +YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RY
Sbjct: 321 KYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KR
Sbjct: 381 ITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L LI++EI +L  +YA+LE+IW  EK  ++ S Q+KEEIEKVR  I +  R+   + V++
Sbjct: 441 LQLIEEEIERLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIVRLQREGKLEKVAE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG+L +LE  LK+ +Q + Q  +   +  LL+T+VG+EEIAE+VSR TGIPVS+++Q 
Sbjct: 501 LQYGKLPQLESQLKQVTQAEAQEQHAPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQG 560

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           EREKLL+IE  L +RVVGQDEAISAV++AIRRSR+GL+D  RPYGSF+FLGPTGVGKTEL
Sbjct: 561 EREKLLHIEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTEL 620

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+I
Sbjct: 621 CKALASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVI 680

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ +    +E
Sbjct: 681 LLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSLTGSPQE 740

Query: 555 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 614
            IK AV  EVK +FRPEF+NRIDD++VF  L+R NI SIA IQL  L ++L K++M L +
Sbjct: 741 EIKDAVWIEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDV 800

Query: 615 SKAALKKISNIGFDLIYGAR 634
           S AAL++I  +G+D ++GAR
Sbjct: 801 SPAALEQIGKVGYDPLFGAR 820


>gi|221198117|ref|ZP_03571163.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD2M]
 gi|221208392|ref|ZP_03581395.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD2]
 gi|221215144|ref|ZP_03588111.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD1]
 gi|421471427|ref|ZP_15919714.1| ATP-dependent chaperone protein ClpB [Burkholderia multivorans ATCC
           BAA-247]
 gi|421475449|ref|ZP_15923396.1| ATP-dependent chaperone protein ClpB [Burkholderia multivorans CF2]
 gi|221165080|gb|EED97559.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD1]
 gi|221171805|gb|EEE04249.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD2]
 gi|221182049|gb|EEE14450.1| ATP-dependent chaperone ClpB [Burkholderia multivorans CGD2M]
 gi|400225514|gb|EJO55675.1| ATP-dependent chaperone protein ClpB [Burkholderia multivorans ATCC
           BAA-247]
 gi|400230122|gb|EJO59935.1| ATP-dependent chaperone protein ClpB [Burkholderia multivorans CF2]
          Length = 865

 Score =  884 bits (2284), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/621 (66%), Positives = 530/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L  +YA+LE+IW  EK  ++ S Q+KEEIEKVR  I +  R+   + V+
Sbjct: 440 RLQLIEEEIERLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK+ +Q + Q  +N  +  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLEAQLKQVTQAEEQEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL+IE  L +RVVGQDEAI+AV++AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLHIEEKLHERVVGQDEAINAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSMTGSPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + IK AV  EVK +FRPEF+NRIDD++VF  L+R NI SIA IQL  L ++L K++M L 
Sbjct: 740 DEIKDAVWLEVKQHFRPEFLNRIDDVVVFHGLDRHNIESIAKIQLARLHDRLAKLDMALD 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL++I+ +G+D ++GAR
Sbjct: 800 VSPAALEQIAKVGYDPLFGAR 820


>gi|387902393|ref|YP_006332732.1| ClpB protein [Burkholderia sp. KJ006]
 gi|387577285|gb|AFJ86001.1| ClpB protein [Burkholderia sp. KJ006]
          Length = 865

 Score =  883 bits (2282), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/620 (66%), Positives = 525/620 (84%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  K++L LD+A LLAG KYRGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EYR
Sbjct: 261 SVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           +YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RY
Sbjct: 321 KYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+KR
Sbjct: 381 ITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L LI++EI +L  +YA+LE+IW  EK  ++   Q+KEEIEKVR  I +  R+   + V++
Sbjct: 441 LQLIEEEIERLGREYADLEEIWTAEKAAVQGGAQLKEEIEKVRADIVRLQREGKLEKVAE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG L +LE  LK+ +Q + Q  +   +  LL+T+VG+EEIAE+VSR TGIPVS+++Q 
Sbjct: 501 LQYGRLPQLESQLKQVTQAEAQEQHAPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQG 560

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           EREKLL+IE  L +RVVGQDEAISAV++AIRRSR+GL+D  RPYGSF+FLGPTGVGKTEL
Sbjct: 561 EREKLLHIEEKLHERVVGQDEAISAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTEL 620

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+I
Sbjct: 621 CKALASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVI 680

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ +    +E
Sbjct: 681 LLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSLTGSPQE 740

Query: 555 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 614
            IK AV  EVK +FRPEF+NRIDD++VF  L+R NI SIA IQL  L ++L K++M L +
Sbjct: 741 EIKDAVWIEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALDV 800

Query: 615 SKAALKKISNIGFDLIYGAR 634
           S AAL++I  +G+D ++GAR
Sbjct: 801 SPAALEQIGKVGYDPLFGAR 820


>gi|161524599|ref|YP_001579611.1| ATP-dependent chaperone ClpB [Burkholderia multivorans ATCC 17616]
 gi|189350645|ref|YP_001946273.1| ATP-dependent Clp protease ATP-binding subunit [Burkholderia
           multivorans ATCC 17616]
 gi|160342028|gb|ABX15114.1| ATP-dependent chaperone ClpB [Burkholderia multivorans ATCC 17616]
 gi|189334667|dbj|BAG43737.1| ATP-dependent Clp protease ATP-binding subunit [Burkholderia
           multivorans ATCC 17616]
          Length = 865

 Score =  883 bits (2282), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/621 (66%), Positives = 529/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L  +YA+LE+IW  EK  ++ S Q+KEEIEKVR  I +  R+   + V+
Sbjct: 440 RLQLIEEEIERLGREYADLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK+ +Q + Q  +N  +  LL+T VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLEAQLKQVTQAEEQEQHNPTRPRLLRTHVGAEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL+IE  L +RVVGQDEAI+AV++AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLHIEEKLHERVVGQDEAINAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSMTGSPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + IK AV  EVK +FRPEF+NRIDD++VF  L+R NI SIA IQL  L ++L K++M L 
Sbjct: 740 DEIKDAVWLEVKQHFRPEFLNRIDDVVVFHGLDRHNIESIAKIQLARLHDRLAKLDMALD 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL++I+ +G+D ++GAR
Sbjct: 800 VSPAALEQIAKVGYDPLFGAR 820


>gi|254252226|ref|ZP_04945544.1| ATPase with chaperone activity ATP-binding subunit [Burkholderia
           dolosa AUO158]
 gi|124894835|gb|EAY68715.1| ATPase with chaperone activity ATP-binding subunit [Burkholderia
           dolosa AUO158]
          Length = 865

 Score =  883 bits (2281), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/621 (66%), Positives = 529/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L  +Y++LE+IW  EK  ++ S Q+KEEIEKVR  I +  R+   + V+
Sbjct: 440 RLQLIEEEIERLGREYSDLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK+ +Q + +  +N  +  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLEAQLKQVTQAEEREQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL+IE  L +RVVGQDEAI AV++AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLHIEEKLHERVVGQDEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSMSGSPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + IK AV  EVK +FRPEF+NRIDD++VF  L+R NI SIA IQL  L ++L K++M L 
Sbjct: 740 DEIKDAVWIEVKQHFRPEFLNRIDDVVVFHALDRSNIESIAKIQLARLHDRLAKLDMALD 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL++I+ +G+D ++GAR
Sbjct: 800 VSPAALEQIAKVGYDPLFGAR 820


>gi|187923803|ref|YP_001895445.1| ATP-dependent chaperone ClpB [Burkholderia phytofirmans PsJN]
 gi|187714997|gb|ACD16221.1| ATP-dependent chaperone ClpB [Burkholderia phytofirmans PsJN]
          Length = 865

 Score =  882 bits (2280), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/620 (66%), Positives = 524/620 (84%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  K++L LD+A LLAG KYRGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EYR
Sbjct: 261 AVLSDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           +YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+RY
Sbjct: 321 KYIEKDAALERRFQKVLVDEPTVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+KR
Sbjct: 381 ITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEKDEASQKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L LI++EI +L  +Y++LE+IW  EK  ++ S Q+KEEIEK R +I +  R+   + V++
Sbjct: 441 LQLIEEEIERLNREYSDLEEIWTAEKAAVQGSAQLKEEIEKTRAEITRLQREGKLEKVAE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG+L  LE  LKE ++ +    NN  +  LL+T+VG+EEIAE+VSR+TGIPVS+++Q 
Sbjct: 501 LQYGKLPGLEAQLKEVTKAEASEQNNPTRPRLLRTQVGAEEIAEVVSRSTGIPVSRMMQG 560

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           EREKLL IE  L  RVVGQDEAISAV++AIRRSR+GLSD  RPYGSF+FLGPTGVGKTEL
Sbjct: 561 EREKLLQIEEKLHARVVGQDEAISAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTEL 620

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L++ +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+I
Sbjct: 621 CKALASFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVI 680

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +E
Sbjct: 681 LLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSMVGEPQE 740

Query: 555 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 614
            +K AV  EVK++FRPEF+NRIDD++VF  L+R NI SIA IQL  L  +L K++M L +
Sbjct: 741 AVKDAVWEEVKLHFRPEFLNRIDDVVVFHALDRSNIQSIARIQLQRLHERLAKLDMQLVV 800

Query: 615 SKAALKKISNIGFDLIYGAR 634
           S +AL+ +  +G+D ++GAR
Sbjct: 801 SDSALEHVGKVGYDPLFGAR 820


>gi|209519546|ref|ZP_03268339.1| ATP-dependent chaperone ClpB [Burkholderia sp. H160]
 gi|209500025|gb|EEA00088.1| ATP-dependent chaperone ClpB [Burkholderia sp. H160]
          Length = 865

 Score =  882 bits (2278), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/621 (66%), Positives = 528/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP +L +K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EY
Sbjct: 260 KAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQERYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L  +Y++LE+IW  EK  ++ S Q+KEEIEK R +I +  R+   + V+
Sbjct: 440 RLQLIEEEIERLNREYSDLEEIWTAEKAAVQGSAQLKEEIEKTRAEITRLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L  LE  LKE ++ + +  N+  +  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPGLEAQLKEVTRAEAEEQNSPKRLRLLRTQVGAEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL IE+ L +RVVGQDEAI+AV++AIRRSR+GLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLQIESKLHERVVGQDEAINAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMVGEPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AV  EVK++FRPEF+NRIDD++VF  L+R NI SIA IQL  L  +L K++M L 
Sbjct: 740 EAVKDAVWEEVKLHFRPEFLNRIDDVVVFHALDRSNIQSIARIQLGRLHERLAKLDMQLV 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL+ I  +G+D ++GAR
Sbjct: 800 VSDAALEHIGKVGYDPLFGAR 820


>gi|167836362|ref|ZP_02463245.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
           thailandensis MSMB43]
 gi|424903869|ref|ZP_18327382.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
           thailandensis MSMB43]
 gi|390931742|gb|EIP89143.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
           thailandensis MSMB43]
          Length = 865

 Score =  882 bits (2278), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/621 (66%), Positives = 529/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEQDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L  +YA+LE+IW  EK  ++ S Q+KEEI+KVR  I +  R+   + V+
Sbjct: 440 RLALIEEEIERLGREYADLEEIWTAEKAAVQGSAQLKEEIDKVRADIARLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK+ +Q +    +N  +  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLEARLKQVAQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL+IE  L +RVVGQ+EAI AV++AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLHIEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALAGFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMSGASQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV  EVK +FRPEF+NRIDD++VF  L+R NI +IA IQL  L ++L K++M L 
Sbjct: 740 EEIKDAVWVEVKQHFRPEFLNRIDDVVVFHSLDRSNIQAIARIQLARLHDRLAKLDMALD 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+AAL++IS +G+D ++GAR
Sbjct: 800 VSEAALEQISKVGYDPLFGAR 820


>gi|295676449|ref|YP_003604973.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1002]
 gi|295436292|gb|ADG15462.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1002]
          Length = 865

 Score =  881 bits (2277), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/621 (66%), Positives = 528/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EY
Sbjct: 260 KAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQERYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L  +Y++LE+IW  EK  ++ S Q+KEEIEK R +I +  R+   + V+
Sbjct: 440 RLQLIEEEIERLNREYSDLEEIWTAEKAAVQGSAQLKEEIEKTRAEIVRLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L  LE  LKE ++ + +  N+  +  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPGLEAQLKEVTRAEAEEQNSPKRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL IE+ L +RVVGQDEAISAV++AIRRSR+GLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLQIESKLHERVVGQDEAISAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMVGEPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AV  EVK++FRPEF+NRIDD++VF  L+R NI SIA IQL  L  +L K++M L 
Sbjct: 740 EAVKDAVWEEVKLHFRPEFLNRIDDVVVFHALDRSNIQSIARIQLQRLHERLAKLDMQLV 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL+ I  +G+D ++GAR
Sbjct: 800 VSDAALEHIGKVGYDPLFGAR 820


>gi|427401776|ref|ZP_18892848.1| chaperone ClpB [Massilia timonae CCUG 45783]
 gi|425719488|gb|EKU82421.1| chaperone ClpB [Massilia timonae CCUG 45783]
          Length = 869

 Score =  881 bits (2277), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/621 (65%), Positives = 528/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+SL  K++L LD+A LLAG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKGKRVLSLDMAALLAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++ ++   I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLKELAQDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKDAA ERRFQKI+V+EP +E TI+ILRGLQ+KYE+HH V+ITDPAI+AA+ELS+R
Sbjct: 320 RKYVEKDAALERRFQKIIVDEPSVEATIAILRGLQEKYELHHQVDITDPAIIAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAAKIKIEIDSKPE+MD+LERR+IQLKIE EA+++E DE+S++
Sbjct: 380 YITDRFLPDKAIDLIDEAAAKIKIEIDSKPEVMDRLERRMIQLKIEREAVRKETDEASQR 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L+ +EI +LE +Y + E++ K EK  ++ +  I+EEIE++R ++ +A R+S+WQ  S
Sbjct: 440 RLELLGEEIARLEREYNDYEEVLKAEKAAVQGTTHIREEIERIRYQMEEARRQSNWQLAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG L +LE  L++      +   +  K  LL+T+VG+EEIAE+VSR TGIPV++++Q
Sbjct: 500 ELQYGRLPELEAQLRQAEDATARAEADNVKPKLLRTQVGAEEIAEVVSRATGIPVARMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL+IE+ L KRVVGQDEAI AVS+AIRRSR+GLSD  RPYGSFMFLGPTGVGKTE
Sbjct: 560 GERDKLLHIEDELHKRVVGQDEAIEAVSDAIRRSRAGLSDPNRPYGSFMFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+A +F+ E+++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALAAFLFDTEDALIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ LDDGR+TD +GRT++F+NT+IVMTSNLGS +I+ M+  + 
Sbjct: 680 ILLDEIEKAHPDVFNVLLQALDDGRMTDGQGRTVDFKNTVIVMTSNLGSHRIQSMDTDEP 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
            ++KLAVM EV+ +FRPEFINRID+I+VF  L+ KNI +IA IQL+ L+ +L KM M L 
Sbjct: 740 AVVKLAVMAEVRGHFRPEFINRIDEIVVFHALDEKNIGAIARIQLHNLEARLAKMEMTLD 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           I   +L++I+  G+D +YGAR
Sbjct: 800 IDDESLQRIAEAGYDPVYGAR 820


>gi|167587015|ref|ZP_02379403.1| AAA ATPase, ClpB [Burkholderia ubonensis Bu]
          Length = 865

 Score =  881 bits (2277), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/621 (66%), Positives = 529/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEQDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L  +Y++LE+IW  EK  ++ S Q+KEEIEKVR  I +  R+   + V+
Sbjct: 440 RLQLIEEEIERLGREYSDLEEIWTAEKAAVQGSAQLKEEIEKVRADIARLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +L+  LK+ +Q + +  +N  +  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLDAQLKQVTQAEEREQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL+IE  L +RVVGQ+EAI AV++AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLHIEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+A +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALAAFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMAGSPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV  EVK +FRPEF+NRIDD++VF  L+R NI SIA IQL  L ++L K++M L 
Sbjct: 740 EEIKDAVWLEVKQHFRPEFLNRIDDVVVFHALDRGNIQSIAKIQLARLHDRLAKLDMALD 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+AAL+++  +G+D ++GAR
Sbjct: 800 VSEAALEQVGKVGYDPLFGAR 820


>gi|325982689|ref|YP_004295091.1| ATP-dependent chaperone ClpB [Nitrosomonas sp. AL212]
 gi|325532208|gb|ADZ26929.1| ATP-dependent chaperone ClpB [Nitrosomonas sp. AL212]
          Length = 860

 Score =  881 bits (2277), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 418/621 (67%), Positives = 525/621 (84%), Gaps = 3/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +N VLIGEPGVGKTAIVEGLAQRIINGEVP SL  K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNLVLIGEPGVGKTAIVEGLAQRIINGEVPESLKDKRVLVLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLKELAQDEGKTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LVEEP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS R
Sbjct: 320 RKYIEKDAALERRFQKVLVEEPSVEVTIAILRGLQEKYEVHHGVDITDPAIVAAAELSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+I++EIDSKPEI+DKL+RRLIQLKIE EAIK+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAAARIRMEIDSKPEILDKLDRRLIQLKIEREAIKKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L+++EI   E +Y +L +IWK EK  +  SQQIKE +EK++L+I  ATRK DWQ VS
Sbjct: 440 RLQLLEEEIKHKEREYDDLAEIWKAEKFQVHGSQQIKEAMEKLKLEIEAATRKGDWQKVS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG L +LE  L++ +  +     +A    LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 500 ELQYGRLPQLEAQLQQTAGNE---STSALTPRLLRTQVGAEEIAEVVSRATGIPVSKMMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RVVGQDEA+  VS+AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 557 GEREKLLLMEQKLHDRVVGQDEAVRLVSDAIRRSRAGLADPNRPYGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IR+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE+VRRKPY++
Sbjct: 617 LCKALAGFLFDSEDHLIRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTELVRRKPYAV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+EM   + 
Sbjct: 677 ILLDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQEMSGNEY 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + IK AVMNEVK YFRPEFINRID+++VF  L  K+I SIA IQL+ L+ +L K+ + L 
Sbjct: 737 QAIKQAVMNEVKTYFRPEFINRIDEVVVFHALGEKHIHSIARIQLHSLEARLAKLEIQLI 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+AAL  +S  GFD ++GAR
Sbjct: 797 VSEAALTALSQAGFDPVFGAR 817


>gi|307729565|ref|YP_003906789.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1003]
 gi|307584100|gb|ADN57498.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1003]
          Length = 865

 Score =  881 bits (2276), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/621 (65%), Positives = 526/621 (84%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EY
Sbjct: 260 KAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPTVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L+ +Y++LE+IW  EK  ++ S Q+KEEI++ R +I +  R+   + V+
Sbjct: 440 RLQLIEEEIERLDREYSDLEEIWTAEKAAVQGSAQLKEEIDRTRAEITRLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L  LE  LKE +Q + +  NN  +  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPGLEAQLKEVTQAEAKEQNNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL IE  L +RV+GQDEAI+AV++AIRRSR+GLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLQIEEKLHERVIGQDEAINAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+A +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALAAFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSMVGEPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AV  EVK++FRPEF+NRIDD++VF  L+R N+ SIA IQL  L  +L K++M L 
Sbjct: 740 EAVKDAVWTEVKLHFRPEFLNRIDDVVVFHALDRSNVQSIARIQLQRLHERLAKLDMQLV 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL+ +  +G+D ++GAR
Sbjct: 800 VSDEALEHVGKVGYDPLFGAR 820


>gi|186475703|ref|YP_001857173.1| ATP-dependent chaperone ClpB [Burkholderia phymatum STM815]
 gi|184192162|gb|ACC70127.1| ATP-dependent chaperone ClpB [Burkholderia phymatum STM815]
          Length = 865

 Score =  880 bits (2273), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/621 (66%), Positives = 526/621 (84%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EY
Sbjct: 260 KAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQERYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MD+L+RR IQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRRIQLKIEREAVKKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L+ +Y++LE+IW  EK  ++ S Q+KEEIEK R +I +  R+   + V+
Sbjct: 440 RLQLIEEEIQRLDREYSDLEEIWTAEKAAVQGSAQLKEEIEKTRAEITRLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK  ++ + +  NN  +  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLEAQLKAVTKAEAEEQNNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL IE  L +RVVGQDEAISAV++AIRRSR+GLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLQIEEKLHQRVVGQDEAISAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+A +F+ E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALAAFLFDAEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHVIQSMVGEPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AV  EVK++FRPEF+NRIDD++VF  L+R NI SIA IQL  +  +L K++M L 
Sbjct: 740 EAVKDAVWEEVKLHFRPEFLNRIDDVVVFHALDRANIQSIAKIQLERVHERLAKLDMQLV 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+AAL+ I  +G+D ++GAR
Sbjct: 800 VSEAALELIGKVGYDPLFGAR 820


>gi|83719137|ref|YP_442726.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
           thailandensis E264]
 gi|167581671|ref|ZP_02374545.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
           thailandensis TXDOH]
 gi|167619788|ref|ZP_02388419.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
           thailandensis Bt4]
 gi|257138938|ref|ZP_05587200.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
           thailandensis E264]
 gi|83652962|gb|ABC37025.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
           thailandensis E264]
          Length = 865

 Score =  880 bits (2273), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/621 (66%), Positives = 527/621 (84%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEQDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L  +YA+LE+IW  EK  ++ S Q+KEEI+KVR  I +  R+   + V+
Sbjct: 440 RLALIEEEIERLGRQYADLEEIWTAEKAAVQGSAQLKEEIDKVRADIARLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK+ +Q +    +N  +  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLEARLKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL+IE  L +RVVGQ+EAI AV++AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLHIEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALAGFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMSGSSQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV  EVK +FRPEF+NRIDD++VF  L+R NI +IA IQL  L ++L K+ M L 
Sbjct: 740 EEIKDAVWVEVKQHFRPEFLNRIDDVVVFHSLDRSNIQAIAKIQLARLHDRLAKLEMALD 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+AAL++I  +G+D ++GAR
Sbjct: 800 VSEAALEQIGKVGYDPLFGAR 820


>gi|91783442|ref|YP_558648.1| heat-shock protein, chaperone ClpB [Burkholderia xenovorans LB400]
 gi|385209766|ref|ZP_10036634.1| ATP-dependent chaperone ClpB [Burkholderia sp. Ch1-1]
 gi|91687396|gb|ABE30596.1| Heat-shock protein, chaperone ClpB [Burkholderia xenovorans LB400]
 gi|385182104|gb|EIF31380.1| ATP-dependent chaperone ClpB [Burkholderia sp. Ch1-1]
          Length = 865

 Score =  880 bits (2273), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/621 (66%), Positives = 524/621 (84%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EY
Sbjct: 260 KAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPTVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L  +Y++L++IW  EK  ++ S Q+KEEIEK R +I +  R+   + V+
Sbjct: 440 RLQLIEEEIERLNREYSDLDEIWTAEKAAVQGSAQLKEEIEKTRAEITRLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L  LE  LKE ++ +    NN  +  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPGLEAQLKEVTKAEASEQNNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL IE  L  RVVGQDEAISAV++AIRRSR+GLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLQIEEKLHARVVGQDEAISAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALASFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMVGEPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AV  EVK++FRPEF+NRIDD++VF  L+R NI SIA IQL  L+ +L K++M L 
Sbjct: 740 EAVKDAVWEEVKLHFRPEFLNRIDDVVVFHALDRSNIQSIARIQLQRLQERLAKLDMQLL 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL+ +  +G+D ++GAR
Sbjct: 800 VSDEALEHVGKVGYDPLFGAR 820


>gi|323526162|ref|YP_004228315.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1001]
 gi|407713481|ref|YP_006834046.1| ATP-dependent Clp protease ATP-binding protein subunit ClpB
           [Burkholderia phenoliruptrix BR3459a]
 gi|323383164|gb|ADX55255.1| ATP-dependent chaperone ClpB [Burkholderia sp. CCGE1001]
 gi|407235665|gb|AFT85864.1| ATP-dependent Clp protease ATP-binding protein subunit ClpB
           [Burkholderia phenoliruptrix BR3459a]
          Length = 865

 Score =  879 bits (2272), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/621 (65%), Positives = 526/621 (84%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EY
Sbjct: 260 KAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPTVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L+ +Y++LE+IW  EK  ++ S Q+KEEI++ R +I +  R+   + V+
Sbjct: 440 RLQLIEEEIERLDREYSDLEEIWTAEKAAVQGSAQLKEEIDRTRAEITRLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L  LE  LKE +Q + +  NN  +  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPGLEAQLKEVTQAEAKEQNNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL IE  L +RV+GQDEAI+AV++AIRRSR+GLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLQIEEKLHERVIGQDEAINAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+A +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALAAFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQAMVGEPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AV  EVK++FRPEF+NRIDD++VF  L+R N+ SIA IQL  L  +L K++M L 
Sbjct: 740 EAVKDAVWAEVKLHFRPEFLNRIDDVVVFHALDRSNVQSIARIQLQRLHERLAKLDMQLV 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL+ +  +G+D ++GAR
Sbjct: 800 VSDEALEHVGKVGYDPLFGAR 820


>gi|126442131|ref|YP_001059258.1| ATPase AAA [Burkholderia pseudomallei 668]
 gi|167719228|ref|ZP_02402464.1| ATPase AAA-2 [Burkholderia pseudomallei DM98]
 gi|167893910|ref|ZP_02481312.1| ATPase AAA-2 [Burkholderia pseudomallei 7894]
 gi|167918626|ref|ZP_02505717.1| ATPase AAA-2 [Burkholderia pseudomallei BCC215]
 gi|126221624|gb|ABN85130.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 668]
          Length = 865

 Score =  879 bits (2271), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/621 (66%), Positives = 528/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEPDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L  +YA+L++IW  EK  ++ S Q+KEEI+KVR  I +  R+   + V+
Sbjct: 440 RLALIEEEIERLGREYADLDEIWTAEKAAVQGSAQLKEEIDKVRADIARLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK+ +Q +    +N  +  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLEARLKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL+IE  L +RVVGQ+EAI AV++AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLHIEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALAGFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMSGSSQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV  EVK +FRPEF+NRIDD++VF  L+R NI +IA IQL  L ++L K++M L 
Sbjct: 740 EEIKDAVWVEVKQHFRPEFLNRIDDVVVFHSLDRGNIQAIAKIQLARLHDRLAKLDMALD 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+AAL++I  +G+D ++GAR
Sbjct: 800 VSEAALEQIGKVGYDPLFGAR 820


>gi|134277175|ref|ZP_01763890.1| ATP-dependent chaperone protein ClpB [Burkholderia pseudomallei
           305]
 gi|134250825|gb|EBA50904.1| ATP-dependent chaperone protein ClpB [Burkholderia pseudomallei
           305]
          Length = 865

 Score =  879 bits (2270), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/621 (66%), Positives = 528/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEPDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L  +YA+L++IW  EK  ++ S Q+KEEI+KVR  I +  R+   + V+
Sbjct: 440 RLALIEEEIERLGREYADLDEIWTAEKAAVQGSAQLKEEIDKVRADIARLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK+ +Q +    +N  +  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLEARLKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL+IE  L +RVVGQ+EAI AV++AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLHIEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALAGFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMSGSPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV  EVK +FRPEF+NRIDD++VF  L+R NI +IA IQL  L ++L K++M L 
Sbjct: 740 EEIKDAVWVEVKQHFRPEFLNRIDDVVVFHSLDRGNIQAIAKIQLARLHDRLAKLDMALD 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+AAL++I  +G+D ++GAR
Sbjct: 800 VSEAALEQIGKVGYDPLFGAR 820


>gi|390572032|ref|ZP_10252259.1| ATP-dependent chaperone ClpB [Burkholderia terrae BS001]
 gi|420256959|ref|ZP_14759764.1| ATP-dependent chaperone ClpB [Burkholderia sp. BT03]
 gi|389936015|gb|EIM97916.1| ATP-dependent chaperone ClpB [Burkholderia terrae BS001]
 gi|398042076|gb|EJL35121.1| ATP-dependent chaperone ClpB [Burkholderia sp. BT03]
          Length = 865

 Score =  878 bits (2269), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/621 (65%), Positives = 525/621 (84%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EY
Sbjct: 260 KAVLNDIAKDEGQTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQERYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MD+L+RR IQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRRIQLKIEREAVKKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L+ +Y++LE+IW  EK  ++ S Q+KEEIEK R +I +  R+   + V+
Sbjct: 440 RLQLIEEEIERLDREYSDLEEIWTAEKAAVQGSAQLKEEIEKTRAEITRLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK  ++ + +  NN  +  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLESQLKAVTKAEAEEQNNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL IE  L +RVVGQDEAI+AV++AIRRSR+GLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLQIEEKLHQRVVGQDEAITAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+A +F+ E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALAAFLFDAEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSMVGQPE 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AV  EVK++FRPEF+NRIDD++VF  L+R NI SIA IQL  +  +L K++M L 
Sbjct: 740 EAVKDAVWEEVKLHFRPEFLNRIDDVVVFHALDRSNIQSIAKIQLERVHERLAKLDMQLV 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL+ I  +G+D ++GAR
Sbjct: 800 VSDAALELIGKVGYDPLFGAR 820


>gi|76812125|ref|YP_333784.1| ClpB heat-shock protein [Burkholderia pseudomallei 1710b]
 gi|167738226|ref|ZP_02411000.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
           pseudomallei 14]
 gi|167902362|ref|ZP_02489567.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
           pseudomallei NCTC 13177]
 gi|167910600|ref|ZP_02497691.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
           pseudomallei 112]
 gi|254261495|ref|ZP_04952549.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1710a]
 gi|254297398|ref|ZP_04964851.1| clpB protein [Burkholderia pseudomallei 406e]
 gi|386861504|ref|YP_006274453.1| ClpB heat-shock protein [Burkholderia pseudomallei 1026b]
 gi|418533774|ref|ZP_13099633.1| ClpB heat-shock protein [Burkholderia pseudomallei 1026a]
 gi|418540647|ref|ZP_13106174.1| ClpB heat-shock protein [Burkholderia pseudomallei 1258a]
 gi|418546892|ref|ZP_13112080.1| ClpB heat-shock protein [Burkholderia pseudomallei 1258b]
 gi|76581578|gb|ABA51053.1| ClpB heat-shock protein [Burkholderia pseudomallei 1710b]
 gi|157807919|gb|EDO85089.1| clpB protein [Burkholderia pseudomallei 406e]
 gi|254220184|gb|EET09568.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1710a]
 gi|385360734|gb|EIF66648.1| ClpB heat-shock protein [Burkholderia pseudomallei 1026a]
 gi|385361021|gb|EIF66923.1| ClpB heat-shock protein [Burkholderia pseudomallei 1258a]
 gi|385362820|gb|EIF68618.1| ClpB heat-shock protein [Burkholderia pseudomallei 1258b]
 gi|385658632|gb|AFI66055.1| ClpB heat-shock protein [Burkholderia pseudomallei 1026b]
          Length = 865

 Score =  878 bits (2269), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/621 (66%), Positives = 528/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEPDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L  +YA+L++IW  EK  ++ S Q+KEEI+KVR  I +  R+   + V+
Sbjct: 440 RLALIEEEIERLGREYADLDEIWTAEKAAVQGSAQLKEEIDKVRADIARLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK+ +Q +    +N  +  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLEARLKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL+IE  L +RVVGQ+EAI AV++AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLHIEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALAGFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMSGSSQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV  EVK +FRPEF+NRIDD++VF  L+R NI +IA IQL  L ++L K++M L 
Sbjct: 740 EEIKDAVWVEVKQHFRPEFLNRIDDVVVFHSLDRGNIQAIAKIQLARLHDRLAKLDMALD 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+AAL++I  +G+D ++GAR
Sbjct: 800 VSEAALEQIGKVGYDPLFGAR 820


>gi|53723604|ref|YP_103036.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
           mallei ATCC 23344]
 gi|67639679|ref|ZP_00438519.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei GB8 horse
           4]
 gi|121598639|ref|YP_993186.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
           mallei SAVP1]
 gi|124385885|ref|YP_001026039.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
           mallei NCTC 10229]
 gi|126448469|ref|YP_001080692.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
           mallei NCTC 10247]
 gi|167003461|ref|ZP_02269247.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei PRL-20]
 gi|254178097|ref|ZP_04884752.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
           mallei ATCC 10399]
 gi|254206315|ref|ZP_04912667.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei JHU]
 gi|254358273|ref|ZP_04974546.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei
           2002721280]
 gi|52427027|gb|AAU47620.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
           mallei ATCC 23344]
 gi|121227449|gb|ABM49967.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
           mallei SAVP1]
 gi|124293905|gb|ABN03174.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei NCTC
           10229]
 gi|126241339|gb|ABO04432.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei NCTC
           10247]
 gi|147753758|gb|EDK60823.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei JHU]
 gi|148027400|gb|EDK85421.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei
           2002721280]
 gi|160699136|gb|EDP89106.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
           mallei ATCC 10399]
 gi|238520268|gb|EEP83730.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei GB8 horse
           4]
 gi|243061022|gb|EES43208.1| ATP-dependent chaperone protein ClpB [Burkholderia mallei PRL-20]
          Length = 865

 Score =  878 bits (2268), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/621 (66%), Positives = 528/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEPDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L  +YA+L++IW  EK  ++ S Q+KEEI+KVR  I +  R+   + V+
Sbjct: 440 RLALIEEEIERLGREYADLDEIWTAEKAAVQGSAQLKEEIDKVRADIARLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK+ +Q +    +N  +  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLEARLKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL+IE  L +RVVGQ+EAI AV++AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLHIEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALAGFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMSGSSQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV  EVK +FRPEF+NRIDD++VF  L+R NI +IA IQL  L ++L K++M L 
Sbjct: 740 EEIKDAVWVEVKQHFRPEFLNRIDDVVVFHSLDRGNIQAIAKIQLARLHDRLAKLDMALD 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+AAL++I  +G+D ++GAR
Sbjct: 800 VSEAALEQIGKVGYDPLFGAR 820


>gi|53719118|ref|YP_108104.1| ClpB heat-shock protein [Burkholderia pseudomallei K96243]
 gi|254189090|ref|ZP_04895601.1| clpB protein [Burkholderia pseudomallei Pasteur 52237]
 gi|52209532|emb|CAH35485.1| ClpB heat-shock protein [Burkholderia pseudomallei K96243]
 gi|157936769|gb|EDO92439.1| clpB protein [Burkholderia pseudomallei Pasteur 52237]
          Length = 876

 Score =  878 bits (2268), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/621 (66%), Positives = 528/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RL
Sbjct: 211 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERL 270

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 271 KAVLNDIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 330

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 331 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 390

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 391 YITDRFLPDKAIDLIDEAASRIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEPDEASQK 450

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L  +YA+L++IW  EK  ++ S Q+KEEI+KVR  I +  R+   + V+
Sbjct: 451 RLALIEEEIERLGREYADLDEIWTAEKAAVQGSAQLKEEIDKVRADIARLQREGKLEKVA 510

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK+ +Q +    +N  +  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 511 ELQYGKLPQLEARLKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQ 570

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL+IE  L +RVVGQ+EAI AV++AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 571 GEREKLLHIEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTE 630

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 631 LCKALAGFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 690

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 691 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMSGSPQ 750

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV  EVK +FRPEF+NRIDD++VF  L+R NI +IA IQL  L ++L K++M L 
Sbjct: 751 EEIKDAVWVEVKQHFRPEFLNRIDDVVVFHSLDRGNIQAIAKIQLARLHDRLAKLDMALD 810

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+AAL++I  +G+D ++GAR
Sbjct: 811 VSEAALEQIGKVGYDPLFGAR 831


>gi|395761758|ref|ZP_10442427.1| ATP-dependent protease Hsp 100 [Janthinobacterium lividum PAMC
           25724]
          Length = 868

 Score =  877 bits (2267), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 417/622 (67%), Positives = 534/622 (85%), Gaps = 4/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL  K++L LD+A LLAG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKGKRVLSLDMAALLAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++ ++   I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLKELAMDEGQTIVFIDEMHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ KY +HH VEITD AI+AA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQDKYALHHKVEITDAAIIAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAAKIKIEIDSKPE+MDKLERRLIQLKIE EA+K+E DE+S +
Sbjct: 380 YITDRFLPDKAIDLIDEAAAKIKIEIDSKPEVMDKLERRLIQLKIEREAVKKEKDEASLR 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI KL+ +Y + E+I K EK +++ S  IKEEIE V+L++ +ATR+S+WQ VS
Sbjct: 440 RLGLIEEEIVKLQREYNDFEEILKAEKAVVQGSTHIKEEIENVKLQMEQATRESNWQKVS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLP-NNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIV 372
           +L+YG+L +LE  LK   Q D  +P  + ++  LL+T+VG+EEIAE+VSR TGIPVS+++
Sbjct: 500 ELQYGKLPQLEAQLK---QADSGIPKRDPDQPKLLRTEVGAEEIAEVVSRATGIPVSRMM 556

Query: 373 QVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKT 432
           Q ER+KLL+IE  L +RVVGQDEAI+AV++AIRRSR+GL+D  RPYGSFMFLGPTGVGKT
Sbjct: 557 QGERDKLLHIEEKLHERVVGQDEAITAVADAIRRSRAGLADPNRPYGSFMFLGPTGVGKT 616

Query: 433 ELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYS 492
           EL K L+  +F+ EES+IRIDMSEF+EKHS++RLIGAPPGY+GY+EGGYLTE VRRKPYS
Sbjct: 617 ELSKALATFLFDTEESMIRIDMSEFMEKHSVARLIGAPPGYVGYDEGGYLTEAVRRKPYS 676

Query: 493 LILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGD 552
           +ILLDE+EKA++DVFN+LLQ+LDDGR+TD +GRT++F+NT+I+MTSNLGS KI+ ME  D
Sbjct: 677 VILLDEVEKAHADVFNVLLQVLDDGRMTDGQGRTVDFKNTVIIMTSNLGSHKIQAMESDD 736

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
             ++KLAVM EV+ +FRPEF+NRID+I+VF  L+ KNI +IA IQL IL+ +L +M+M L
Sbjct: 737 PGVVKLAVMAEVRSHFRPEFVNRIDEIVVFHGLDEKNIGAIAKIQLKILEERLARMDMQL 796

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            ++ AAL++I+  G+D +YGAR
Sbjct: 797 SLTDAALQQIAEAGYDPVYGAR 818


>gi|126453997|ref|YP_001066525.1| clpB protein [Burkholderia pseudomallei 1106a]
 gi|167815415|ref|ZP_02447095.1| ClpB heat-shock protein [Burkholderia pseudomallei 91]
 gi|167823825|ref|ZP_02455296.1| ClpB heat-shock protein [Burkholderia pseudomallei 9]
 gi|167845366|ref|ZP_02470874.1| ClpB heat-shock protein [Burkholderia pseudomallei B7210]
 gi|217421888|ref|ZP_03453392.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 576]
 gi|226197488|ref|ZP_03793065.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei Pakistan 9]
 gi|237812581|ref|YP_002897032.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei MSHR346]
 gi|242314296|ref|ZP_04813312.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1106b]
 gi|254179519|ref|ZP_04886118.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1655]
 gi|254197201|ref|ZP_04903623.1| clpB protein [Burkholderia pseudomallei S13]
 gi|403518952|ref|YP_006653085.1| clpB protein [Burkholderia pseudomallei BPC006]
 gi|418382969|ref|ZP_12966888.1| ClpB heat-shock protein [Burkholderia pseudomallei 354a]
 gi|418553114|ref|ZP_13117952.1| ClpB heat-shock protein [Burkholderia pseudomallei 354e]
 gi|126227639|gb|ABN91179.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1106a]
 gi|169653942|gb|EDS86635.1| clpB protein [Burkholderia pseudomallei S13]
 gi|184210059|gb|EDU07102.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1655]
 gi|217395630|gb|EEC35648.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 576]
 gi|225930867|gb|EEH26877.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei Pakistan 9]
 gi|237506453|gb|ACQ98771.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei MSHR346]
 gi|242137535|gb|EES23937.1| ATP-dependent chaperone ClpB [Burkholderia pseudomallei 1106b]
 gi|385372048|gb|EIF77180.1| ClpB heat-shock protein [Burkholderia pseudomallei 354e]
 gi|385376808|gb|EIF81443.1| ClpB heat-shock protein [Burkholderia pseudomallei 354a]
 gi|403074594|gb|AFR16174.1| clpB protein [Burkholderia pseudomallei BPC006]
          Length = 865

 Score =  877 bits (2267), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/621 (66%), Positives = 528/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMEIDSKPEEMDKLDRRLIQLKIEREAVKKEPDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L  +YA+L++IW  EK  ++ S Q+KEEI+KVR  I +  R+   + V+
Sbjct: 440 RLALIEEEIERLGREYADLDEIWTAEKAAVQGSAQLKEEIDKVRADIARLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK+ +Q +    +N  +  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLEARLKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL+IE  L +RVVGQ+EAI AV++AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLHIEEKLHERVVGQNEAIDAVADAIRRSRAGLADPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALAGFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMSGSPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV  EVK +FRPEF+NRIDD++VF  L+R NI +IA IQL  L ++L K++M L 
Sbjct: 740 EEIKDAVWVEVKQHFRPEFLNRIDDVVVFHSLDRGNIQAIAKIQLARLHDRLAKLDMALD 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+AAL++I  +G+D ++GAR
Sbjct: 800 VSEAALEQIGKVGYDPLFGAR 820


>gi|30250327|ref|NP_842397.1| ClpB ATPase dependent protease, chaperonin [Nitrosomonas europaea
           ATCC 19718]
 gi|54035824|sp|Q82SD8.1|CLPB_NITEU RecName: Full=Chaperone protein ClpB
 gi|30181122|emb|CAD86314.1| ClpB ATPase dependent protease, chaperonin [Nitrosomonas europaea
           ATCC 19718]
          Length = 863

 Score =  877 bits (2267), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/621 (66%), Positives = 525/621 (84%), Gaps = 1/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLKELAQDEGRTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 320 RKYVEKDAALERRFQKVLVDEPGVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+I++E DSKPE+MDKL+RRLIQLKIE EA+++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAAARIRMEQDSKPEVMDKLDRRLIQLKIEREAVRKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L+++EI+KLE +YA+L++I K EK+  K SQ+IKEE++K+R +   A RK D Q  S
Sbjct: 440 RLALLEEEISKLEREYADLDEILKAEKSRAKGSQEIKEELDKLRREEEAARRKGDLQRAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L YG + +LE  L E+     +    A +  L +T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 500 ELLYGRIPQLEAQLAEQLHH-AESAEEAVQPKLFRTQVGAEEIAEVVSRATGIPVSKMMQ 558

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L +RV+GQDEA+  VS+AIRRSRSGL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 559 GEREKLLFMEDKLHERVIGQDEAVRLVSDAIRRSRSGLADPNRPYGSFLFLGPTGVGKTE 618

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IR+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 619 LCKALAGFLFDSEEHLIRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 678

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I++M   D 
Sbjct: 679 ILLDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMSGDDY 738

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           ++IKLAVM EVK YFRPEFINRID+++VF  L   +I SIA IQL+ L  +L +M M L 
Sbjct: 739 QVIKLAVMGEVKTYFRPEFINRIDEVVVFHALGEAHIKSIARIQLSNLGKRLAQMEMKLV 798

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ AL K++ +GFD ++GAR
Sbjct: 799 VSEPALTKLAEVGFDPVFGAR 819


>gi|253998254|ref|YP_003050317.1| ATP-dependent chaperone ClpB [Methylovorus glucosetrophus SIP3-4]
 gi|253984933|gb|ACT49790.1| ATP-dependent chaperone ClpB [Methylovorus glucosetrophus SIP3-4]
          Length = 861

 Score =  877 bits (2267), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/621 (65%), Positives = 525/621 (84%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L LD+A LLAG KYRG+FE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLSLDMAALLAGAKYRGDFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++ ++   I+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLKELAQDEGQTIVFIDEIHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+EIDSKPE+MDKL+RRLIQLKIE EA+++E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMEIDSKPEVMDKLDRRLIQLKIEREAVRKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R  LI+ EI +LE +YA+L+ IWK EK  ++ S  IKE IEK++ ++ +A R+ DWQ VS
Sbjct: 440 RFDLIEDEIKRLEREYADLDDIWKSEKAQVQGSAHIKEAIEKLKQQMEEAKREGDWQRVS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG+L +LE  L + + +++      N+  LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 500 EMQYGKLPQLEAQLNKAASEELNGVPVKNR--LLRTQVGAEEIAEVVSRATGIPVSKMLQ 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RVVGQDEA+  V++AIRRSRSGLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLTMEDKLHERVVGQDEAVRLVADAIRRSRSGLSDPNRPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE ++RIDMSEF+EKHS+SRLIGAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 618 LCKALANFLFDSEEHLVRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGTLTEAVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGS  I+ M   D 
Sbjct: 678 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSQMIQSMSGDDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           +++KLAVM EVK +FRPEFINRID+++VF  L   ++ SIA IQL  L  +L  M+M L+
Sbjct: 738 QVVKLAVMGEVKTHFRPEFINRIDEVVVFHSLGEAHVKSIAGIQLQSLAKRLNAMDMQLE 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++ +AL +I+  GFD +YGAR
Sbjct: 798 VTPSALAEIAAAGFDPVYGAR 818


>gi|238027045|ref|YP_002911276.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
           glumae BGR1]
 gi|237876239|gb|ACR28572.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
           glumae BGR1]
          Length = 865

 Score =  877 bits (2267), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/621 (65%), Positives = 528/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK++V+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVIVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPESMDRLDRRLIQLKIEREAVKKEQDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L  +YA+LE+IW  EK  ++ S Q+KE+I++VR  I +  R+   + V+
Sbjct: 440 RLQLIEEEIERLGREYADLEEIWTAEKAAVQGSAQLKEDIDRVRADIARLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK+ +Q + Q   N ++  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLEAQLKQVTQAEEQNEQNPSRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL+IE  L +RV+GQ+EAI AV++AIRRSR+GLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLHIEEKLHERVIGQEEAIDAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           +CK L+  +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 VCKALAGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQVIQSMAGSPQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AV  EVK++FRPEF+NRIDD++VF  L+R NI +IA IQL  L ++L K++M L 
Sbjct: 740 EAVKDAVWEEVKLHFRPEFLNRIDDVVVFHALDRANIQAIAKIQLARLHDRLAKLDMQLD 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL +I  +G+D ++GAR
Sbjct: 800 VSDAALDQIGKVGYDPLFGAR 820


>gi|313200327|ref|YP_004038985.1| ATP-dependent chaperone clpb [Methylovorus sp. MP688]
 gi|312439643|gb|ADQ83749.1| ATP-dependent chaperone ClpB [Methylovorus sp. MP688]
          Length = 886

 Score =  876 bits (2264), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/621 (65%), Positives = 525/621 (84%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L LD+A LLAG KYRG+FE+RL
Sbjct: 225 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLSLDMAALLAGAKYRGDFEERL 284

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++ ++   I+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 285 KSVLKELAQDEGQTIVFIDEIHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 344

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS R
Sbjct: 345 RQYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSQR 404

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+EIDSKPE+MDKL+RRLIQLKIE EA+++E DE+S+K
Sbjct: 405 YITDRFLPDKAIDLIDEAASRIKMEIDSKPEVMDKLDRRLIQLKIEREAVRKEKDEASQK 464

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R  LI+ EI +LE +YA+L+ IWK EK  ++ S  IKE IEK++ ++ +A R+ DWQ VS
Sbjct: 465 RFDLIEDEIKRLEREYADLDDIWKSEKAQVQGSAHIKEAIEKLKQQMEEAKREGDWQRVS 524

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG+L +LE  L + + +++      N+  LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 525 EMQYGKLPQLEAQLNKAASEELNGVPVKNR--LLRTQVGAEEIAEVVSRATGIPVSKMLQ 582

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RVVGQDEA+  V++AIRRSRSGLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 583 GERDKLLTMEDKLHERVVGQDEAVRLVADAIRRSRSGLSDPNRPYGSFLFLGPTGVGKTE 642

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE ++RIDMSEF+EKHS+SRLIGAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 643 LCKALANFLFDSEEHLVRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGTLTEAVRRKPYSV 702

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGS  I+ M   D 
Sbjct: 703 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSQMIQSMSGDDY 762

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           +++KLAVM EVK +FRPEFINRID+++VF  L   ++ SIA IQL  L  +L  M+M L+
Sbjct: 763 QVVKLAVMGEVKTHFRPEFINRIDEVVVFHSLGEAHVKSIAGIQLQSLAKRLNAMDMQLE 822

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++ +AL +I+  GFD +YGAR
Sbjct: 823 VTPSALAEIAAAGFDPVYGAR 843


>gi|326316084|ref|YP_004233756.1| ATP-dependent chaperone ClpB [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323372920|gb|ADX45189.1| ATP-dependent chaperone ClpB [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 869

 Score =  876 bits (2263), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/621 (65%), Positives = 522/621 (84%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+ GEVP SL  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVAGEVPESLKGKRVLSLDMAALLAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 258 KAVLNELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQKILV EP +E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+R
Sbjct: 318 RKYIEKDAALERRFQKILVGEPSVEATIAILRGLQERYELHHGVEITDPAIVAAAELSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAAKIKIEIDSKPE +DKL+RRLIQL+IE EA+++E DE+S+K
Sbjct: 378 YITDRFLPDKAIDLIDEAAAKIKIEIDSKPEAIDKLDRRLIQLQIEREAVRKEKDEASQK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L++ EI KL+ + A+LE IW  EK   + SQQ++E++EKV+L+I +  RK D+  V+
Sbjct: 438 RLALLEDEIGKLQKEIADLEDIWTSEKAQAQGSQQVREQVEKVKLQIEELKRKGDFNKVA 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L  LER LKE   K+      A    LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 498 ELQYGKLPDLERQLKEAQAKEEGTDGTATPNRLLRTQVGAEEIAEVVSRATGIPVSKMMQ 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +E+ L +RVVGQDEAI+AV+NAIRRSRSGL+D  RP GSF+FLGPTGVGKTE
Sbjct: 558 GEKDKLLQMEDKLHERVVGQDEAIAAVANAIRRSRSGLADPNRPMGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEEHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M   D 
Sbjct: 678 LLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGQDA 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K AV  E+K YFRPEF+NRID+ +VF  L+ KNI +IA IQL +L+ +L KM++ L+
Sbjct: 738 DDVKEAVWGELKNYFRPEFLNRIDETVVFHALDAKNIEAIARIQLQLLEARLAKMDLHLQ 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL +++ +GFD ++GAR
Sbjct: 798 VSPGALSELAKVGFDPVFGAR 818


>gi|334131884|ref|ZP_08505646.1| Chaperone protein ClpB [Methyloversatilis universalis FAM5]
 gi|333443357|gb|EGK71322.1| Chaperone protein ClpB [Methyloversatilis universalis FAM5]
          Length = 861

 Score =  875 bits (2261), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/621 (66%), Positives = 525/621 (84%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP +L  K++L+LD+A LLAG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNEEVPETLKGKRVLVLDMAGLLAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++ ++  II+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KSVLNEVAKDEGRIILFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPTVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S +
Sbjct: 380 YITDRFLPDKAIDLIDEAAARIKMEIDSKPESMDKLDRRLIQLKIEREAVKKEKDEASIR 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI+KL  +Y++LE+IWK EK  +  S  IKEEIEKVR+++    RK  +  ++
Sbjct: 440 RLGLIEEEIDKLHKEYSDLEEIWKAEKAQVVGSAHIKEEIEKVRVQMADLQRKGQFDKLA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG L +LE  LK+  +     P N     LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 500 ELQYGRLPQLEAQLKQAEKSGDVKPQN----KLLRTEVGAEEIAEVVSRATGIPVSKMMQ 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RV+GQDEA+  VS+AIRRSR+GLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLKMEDRLHQRVIGQDEAVRLVSDAIRRSRAGLSDENRPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GY+EGGYLTE VRRKPYS+
Sbjct: 616 LCKTLAEFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYDEGGYLTEAVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           IL DE+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I++M   D 
Sbjct: 676 ILFDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMAGSDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
            ++KLAVM+EVK +FRPEFINRID+++VF  L+ +NI SIA IQL  L+ +L K++M L+
Sbjct: 736 GVVKLAVMSEVKTFFRPEFINRIDEVVVFHALDERNIQSIAKIQLAYLEKRLAKLDMGLQ 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL ++   GFD ++GAR
Sbjct: 796 VSDAALSELGKAGFDPVFGAR 816


>gi|120609936|ref|YP_969614.1| ATPase [Acidovorax citrulli AAC00-1]
 gi|120588400|gb|ABM31840.1| ATPase AAA-2 domain protein [Acidovorax citrulli AAC00-1]
          Length = 869

 Score =  875 bits (2261), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/621 (65%), Positives = 522/621 (84%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+ GEVP SL  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVAGEVPESLKGKRVLSLDMAALLAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 258 KAVLNELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQKILV EP +E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+R
Sbjct: 318 RKYIEKDAALERRFQKILVGEPSVEATIAILRGLQERYELHHGVEITDPAIVAAAELSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAAKIKIEIDSKPE +DKL+RRLIQL+IE EA+K+E DE+S+K
Sbjct: 378 YITDRFLPDKAIDLIDEAAAKIKIEIDSKPEAIDKLDRRLIQLQIEREAVKKEKDEASQK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L+++EI KL+ + A+LE IW  EK   + SQQ++E++EKV+L+I +  RK D+  V+
Sbjct: 438 RLALLEEEIGKLQKEIADLEDIWTSEKAQAQGSQQVREQVEKVKLQIEELKRKGDFNKVA 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG L  LER LKE   K+      A    LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 498 ELQYGRLPDLERQLKEAQAKEEGTDGTATPNRLLRTQVGAEEIAEVVSRATGIPVSKMMQ 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +E+ L +RVVGQDEAI+AV+NAIRRSRSGL+D  RP GSF+FLGPTGVGKTE
Sbjct: 558 GEKDKLLQMEDKLHERVVGQDEAIAAVANAIRRSRSGLADPNRPMGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEEHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M   D 
Sbjct: 678 LLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGQDA 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K AV  E+K +FRPEF+NRID+ +VF  L+ KNI +IA IQL +L+ +L KM++ L+
Sbjct: 738 DDVKEAVWGELKNHFRPEFLNRIDETVVFHALDAKNIEAIARIQLQLLEARLAKMDLHLQ 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL +++ +GFD ++GAR
Sbjct: 798 VSPGALSELAKVGFDPVFGAR 818


>gi|34497399|ref|NP_901614.1| ATP-dependent Clp protease subunit [Chromobacterium violaceum ATCC
           12472]
 gi|54035800|sp|Q7NWN7.1|CLPB_CHRVO RecName: Full=Chaperone protein ClpB
 gi|34103255|gb|AAQ59618.1| ATP-dependent Clp protease subunit; heat-shock protein
           [Chromobacterium violaceum ATCC 12472]
          Length = 859

 Score =  874 bits (2259), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/621 (65%), Positives = 528/621 (85%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S +    +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLNDLSKDDGQTLIFIDEIHTLVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS R
Sbjct: 320 RKYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQEKYEIHHGVDITDPAIVAAAELSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RRLIQLKIE EA+ +E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMELDSKPEAMDKLDRRLIQLKIEREAVNKESDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI+ EI +L  +YA+LE+IWK EK   + SQ IKEEI+++++ + +  RK DWQ ++
Sbjct: 440 RLKLIEDEIAELSREYADLEEIWKAEKAAQQGSQSIKEEIDRLKVDMEELKRKGDWQKLA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LKE      +     N+  LL+T+VG+EEIAE+VSR TGIPVSK++ 
Sbjct: 500 ELQYGKLPQLEARLKEAESAGDKGEAKPNR--LLRTQVGAEEIAEVVSRATGIPVSKMLT 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E++L +RVVGQDEA+SAV++AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GEREKLLKMEDVLHQRVVGQDEAVSAVADAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F++++ +IRIDMSE++EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKTLASFLFDSKDHLIRIDMSEYMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS +I+ M   D 
Sbjct: 678 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQQIQAMATDDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           ++IKLAVM EVK  FRPEFINRID+++VF  L+ K+I SIA IQL  L+N+L K+ + L+
Sbjct: 738 QVIKLAVMAEVKTQFRPEFINRIDEVVVFHGLDEKHIQSIARIQLKSLENRLAKLELSLQ 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           IS  AL  +S  GFD +YGAR
Sbjct: 798 ISDEALALLSEAGFDPVYGAR 818


>gi|388570198|ref|ZP_10156558.1| ATP-dependent chaperone ClpB [Hydrogenophaga sp. PBC]
 gi|388262580|gb|EIK88210.1| ATP-dependent chaperone ClpB [Hydrogenophaga sp. PBC]
          Length = 868

 Score =  874 bits (2257), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/621 (66%), Positives = 526/621 (84%), Gaps = 1/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+ GEVP+SL  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVAGEVPDSLKGKRVLSLDMAALLAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 258 KSVLHELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQKILV+EP +E TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+R
Sbjct: 318 RKYIEKDAALERRFQKILVDEPSVEATIAILRGLQEKYEVHHGVEITDPAIVAAAELSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAAKIKIEIDSKPE MD+L+RRLIQL+IE EAIK+E DE+S+K
Sbjct: 378 YITDRFLPDKAIDLIDEAAAKIKIEIDSKPEAMDRLDRRLIQLQIEREAIKKETDEASQK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI  EI++L+ + A+LE+IWK EK   + S Q+KEEI+K+R +I + TRK D+  V+
Sbjct: 438 RLGLIDVEIDRLKRELADLEEIWKAEKAQAQGSAQVKEEIDKLRHQIEEFTRKGDFNKVA 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE+ LK+ +Q       +A +  LL+T+VG+EEIAE+V+R TGIPVSK++Q
Sbjct: 498 ELQYGKLPELEKRLKD-AQAAETGKKDAGRPQLLRTQVGAEEIAEVVARATGIPVSKLMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RVVGQDEAISAV+NAIRRSRSGLSD  RP GSF+FLGPTGVGKTE
Sbjct: 557 GERDKLLQMEDKLHQRVVGQDEAISAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LCKALAGFLFDSEEHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M     
Sbjct: 677 LLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHMIQSMVGQPY 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K AV  E+K YFRPEF+NRID+ +VF  L+ KNI +IA IQL  L+ +L KM++ L 
Sbjct: 737 DEVKEAVWGELKGYFRPEFLNRIDETVVFHALDAKNIEAIAAIQLKALQARLHKMDLSLD 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL +++ +GFD ++GAR
Sbjct: 797 VSPAALGELAKVGFDPVFGAR 817


>gi|319763932|ref|YP_004127869.1| ATP-dependent chaperone clpb [Alicycliphilus denitrificans BC]
 gi|330823804|ref|YP_004387107.1| ATP-dependent chaperone ClpB [Alicycliphilus denitrificans K601]
 gi|317118493|gb|ADV00982.1| ATP-dependent chaperone ClpB [Alicycliphilus denitrificans BC]
 gi|329309176|gb|AEB83591.1| ATP-dependent chaperone ClpB [Alicycliphilus denitrificans K601]
          Length = 867

 Score =  874 bits (2257), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/621 (65%), Positives = 529/621 (85%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+ GEVP +L +K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVAGEVPETLKNKRVLVLDMAGLLAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++ ++  II+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 258 KSVLKEVAQDEGRIILFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LVEEP +E+TI+ILRGLQ +YE HHGV+ITDPAIVAA+ELS+R
Sbjct: 318 RKYIEKDAALERRFQKVLVEEPSVEDTIAILRGLQVRYEAHHGVDITDPAIVAAAELSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IKIEIDSKPE +DKLERR+IQLKIE EA+K+E DE+S+K
Sbjct: 378 YITDRFLPDKAIDLIDEAAARIKIEIDSKPEALDKLERRMIQLKIEREAMKKETDEASQK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++E+   E +YA+LE++WK EK   + S+QI+++I+ +R++I    RK D+  V+
Sbjct: 438 RLQLIEEELANAEREYADLEEVWKAEKASAQGSEQIRKDIDAIRIQIEDLKRKGDYNRVA 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE+ LKE   +D +    A +  LL+T VG+EEIAE+VSR TGIPV+K++Q
Sbjct: 498 ELQYGKLPELEKRLKEA--QDSEAGGGAPRHQLLRTHVGAEEIAEVVSRATGIPVAKMMQ 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL++E  L +RVVGQDEAISAV+NAIRRSRSGLSD  RP GSF+FLGPTGVGKTE
Sbjct: 556 GEKDKLLHMEEKLHERVVGQDEAISAVANAIRRSRSGLSDPNRPLGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALAGFLFDSEEHMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M   D 
Sbjct: 676 LLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSPLIQAMVGQDA 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV  E+K +FRPEF+NRID+ +VF  L+ K+I +IA IQL +L+ +L KM++ L+
Sbjct: 736 EDIKEAVWGELKSHFRPEFLNRIDETVVFHGLDAKHIEAIARIQLRLLEARLAKMDLSLQ 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AA+ +++ +GFD ++GAR
Sbjct: 796 VSPAAMGELAKVGFDPVFGAR 816


>gi|339326277|ref|YP_004685970.1| chaperone protein ClpB [Cupriavidus necator N-1]
 gi|338166434|gb|AEI77489.1| chaperone protein ClpB [Cupriavidus necator N-1]
          Length = 862

 Score =  873 bits (2256), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/621 (66%), Positives = 525/621 (84%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ ++   I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLNDVAKDEGQTIVFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE MDKLERR IQLKIE EA+K+E DE+S K
Sbjct: 379 YITDRFLPDKAIDLIDEAAARIKMEIDSKPESMDKLERRTIQLKIEREAVKKETDEASMK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +LE +YA+L++IWK EK   + +  +KEEIEKV+L+I K  R+     V+
Sbjct: 439 RLELIEQEIARLEKEYADLDEIWKAEKGAAQGTAALKEEIEKVKLEIAKLQREGKLDKVA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L  LE  LK  +  +       NK  LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 499 ELQYGKLPGLEGKLKAATDAEASEQKQPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L  RVVGQDEA+  VS+AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 557 GEREKLLKMEDRLHARVVGQDEAVRLVSDAIRRSRAGLADENRPYGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LCKALAEFMFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 677 VLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQIIQSMTGEPQ 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV  EV+ +FRPEF+NRID+++VF  L++K+I SIA IQL+ L+ +L +M+M L+
Sbjct: 737 EAIKGAVWQEVRTHFRPEFLNRIDEVVVFHALDQKHIESIARIQLHRLQARLARMDMTLE 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ AL+KI++ G+D ++GAR
Sbjct: 797 VSETALEKIASAGYDPVFGAR 817


>gi|332528193|ref|ZP_08404221.1| ATP-dependent chaperone ClpB [Rubrivivax benzoatilyticus JA2]
 gi|332112761|gb|EGJ12554.1| ATP-dependent chaperone ClpB [Rubrivivax benzoatilyticus JA2]
          Length = 864

 Score =  873 bits (2256), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/621 (65%), Positives = 525/621 (84%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L LD+A LLAG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLSLDMAGLLAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S ++  II+FIDELHTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLKEVSADEGRIILFIDELHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKDAA ERRFQK+LV+EP +E T++ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYVEKDAALERRFQKVLVDEPSVEATVAILRGLQEKYEVHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAAKIKIEIDSKPE MD+L+RR+IQLKIE EA+K+E DE+S++
Sbjct: 379 YITDRFLPDKAIDLIDEAAAKIKIEIDSKPEAMDRLDRRMIQLKIEREAVKKEQDEASQR 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++E+ KL+ +Y +LE+IW  EK   + S Q+KEEI++++ +I +  RK D+  V+
Sbjct: 439 RLGLIEEELLKLQREYNDLEEIWTAEKAQAQGSAQVKEEIDRIKFQIEELKRKGDFNRVA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE+ LKE   K+           LL+T VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 499 ELQYGKLPELEKRLKEAQAKEAGKAQGGQGPQLLRTMVGAEEIAEVVSRATGIPVSKLMQ 558

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RVVGQDEAI AV++AIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 559 GERDKLLQMESRLHERVVGQDEAIVAVADAIRRSRAGLSDPNRPLGSFLFLGPTGVGKTE 618

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F++E+ +IR+DMSE++EKHS+SRLIGAPPGY+GY+EGG LTE VRRKPYS+
Sbjct: 619 LCKALASFLFDSEDHMIRVDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRKPYSV 678

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS  I +M     
Sbjct: 679 LLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHLIMQMAGQPT 738

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E+++ AV  EVK +FRPEF+NRID+ +VF  L+ KNI +IA IQL +L+ +L K+ M L+
Sbjct: 739 ELVREAVWGEVKSHFRPEFLNRIDEAVVFHALDEKNIEAIAKIQLKLLETRLEKLEMKLE 798

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL +++ +GFD ++GAR
Sbjct: 799 VSPAALAELAKVGFDPVFGAR 819


>gi|237653311|ref|YP_002889625.1| ATP-dependent chaperone ClpB [Thauera sp. MZ1T]
 gi|237624558|gb|ACR01248.1| ATP-dependent chaperone ClpB [Thauera sp. MZ1T]
          Length = 860

 Score =  873 bits (2256), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/621 (66%), Positives = 518/621 (83%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKEI+  +  II+FIDELHTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLKEIAQEEGRIIVFIDELHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LVEEP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVEEPSVEATIAILRGLQEKYEIHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE+MDKL+RR+IQLKIE EA+K+E DE+S K
Sbjct: 380 YITDRFLPDKAIDLIDEAAARIKMEIDSKPEVMDKLDRRMIQLKIEREAVKKEKDEASLK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI+ E+ KL+ +Y +LE++WK EK  +  S  IKEEI+ +R ++ +  RK     V+
Sbjct: 440 RLQLIEDELAKLQREYNDLEEVWKAEKAKVAGSAHIKEEIDALRAQMAEYQRKGQLDKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  L+   Q       NA    LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 500 ELQYGKLPQLEGQLRMAEQAG----QNAAPNKLLRTEVGAEEIAEVVSRATGIPVSKMMQ 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L +RVVGQDEA+  V++AIRRSR+GLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 556 GEREKLLKMEDKLHERVVGQDEAVRLVADAIRRSRAGLSDENRPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKTLANFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           IL DE+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M   D 
Sbjct: 676 ILFDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQAMAGDDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
            +IKLAVM EVK YFRPEFINRID+++VF  L+ K+I  IA IQL  L+ +L ++ M ++
Sbjct: 736 GVIKLAVMAEVKTYFRPEFINRIDEVVVFHALDEKHIAGIAKIQLQYLEKRLARLEMGME 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           IS AAL +++  GFD ++GAR
Sbjct: 796 ISDAALAELATAGFDPVFGAR 816


>gi|113868225|ref|YP_726714.1| ATP-dependent protease Clp, ATPase subunit [Ralstonia eutropha H16]
 gi|113527001|emb|CAJ93346.1| ATP-dependent protease Clp, ATPase subunit [Ralstonia eutropha H16]
          Length = 862

 Score =  873 bits (2255), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/621 (66%), Positives = 524/621 (84%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ ++   I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLNDVAKDEGQTIVFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE MDKLERR IQLKIE EA+K+E DE+S K
Sbjct: 379 YITDRFLPDKAIDLIDEAAARIKMEIDSKPESMDKLERRTIQLKIEREAVKKETDEASMK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +LE +YA+L++IWK EK   + +  +KEEIEKV+L+I K  R+     V+
Sbjct: 439 RLELIEQEIARLEKEYADLDEIWKAEKGAAQGTAALKEEIEKVKLEIAKLQREGKLDKVA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L  LE  LK  +  +       NK  LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 499 ELQYGKLPGLEGKLKAATDAEASEQKQPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L  RVVGQDEA+  VS+AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 557 GEREKLLKMEDRLHGRVVGQDEAVRLVSDAIRRSRAGLADENRPYGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LCKALAEFMFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 677 VLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQIIQSMTGEPQ 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV  EV+ +FRPEF+NRID+++VF  L++K+I SIA IQL  L+ +L +M+M L+
Sbjct: 737 EAIKGAVWQEVRTHFRPEFLNRIDEVVVFHALDQKHIESIARIQLQRLQARLARMDMTLE 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ AL+KI++ G+D ++GAR
Sbjct: 797 VSETALEKIASAGYDPVFGAR 817


>gi|257094822|ref|YP_003168463.1| ATP-dependent chaperone ClpB [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257047346|gb|ACV36534.1| ATP-dependent chaperone ClpB [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 859

 Score =  872 bits (2254), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/623 (64%), Positives = 528/623 (84%), Gaps = 8/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L  KK++ LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKGKKVMSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKEI+  +  II+FIDELHTM+G GK EG+IDAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 260 KAVLKEIAQEEGQIIVFIDELHTMVGAGKAEGAIDAGNMLKPALARGDLHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LVEEP +E TI+ILRGL+++YE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVEEPTVESTIAILRGLRERYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE+MDKL+RR+IQLKIE EA+++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAAARIKMEIDSKPEVMDKLDRRMIQLKIEREAVRKERDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R+ LI++E+ KLE +Y +L+++WK EK+ ++ S  IKEEI+K++L++ +  R++ W  V+
Sbjct: 440 RMHLIEEELVKLEREYNDLDEVWKAEKSQVQGSAHIKEEIDKLKLELAQLQRENKWDKVA 499

Query: 314 KLKYGELNKLERIL--KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +++YG+L +LE  L   EKS       +      LL+T+VG+EEIAE+VSR TGIPVSK+
Sbjct: 500 EIQYGKLPQLEAQLTVAEKS------GDGGQHNKLLRTEVGTEEIAEVVSRATGIPVSKM 553

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           +Q EREKLL +E  + +RVVGQDEA+  V+NAIRRSR+GL+D  RPYGSF+FLGPTGVGK
Sbjct: 554 MQGEREKLLQMEERMHQRVVGQDEAVRLVANAIRRSRAGLADPNRPYGSFLFLGPTGVGK 613

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++EE +IR+DMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPY
Sbjct: 614 TELCKALAGFLFDSEEHLIRVDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPY 673

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           S+ILLDE+EKA+ DVFN+LLQ+LDDGR+TD  GRT++F+NT++VMTSNLGS  I++M   
Sbjct: 674 SVILLDEVEKAHPDVFNVLLQVLDDGRMTDGHGRTVDFKNTVVVMTSNLGSQMIQQMAGD 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D ++IKLAVM EVK YFRPEFINRID+++VF  L+ ++I +IA IQL  L+ +L ++ + 
Sbjct: 734 DYQLIKLAVMGEVKTYFRPEFINRIDEVVVFHALDEQHIKAIARIQLAYLEKRLAQLELR 793

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L+++ +AL +++  GFD +YGAR
Sbjct: 794 LEVADSALAEVATAGFDPVYGAR 816


>gi|73541668|ref|YP_296188.1| ATPase AAA [Ralstonia eutropha JMP134]
 gi|72119081|gb|AAZ61344.1| AAA ATPase, central region:Clp, N terminal [Ralstonia eutropha
           JMP134]
          Length = 862

 Score =  872 bits (2252), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 412/621 (66%), Positives = 524/621 (84%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ ++   I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLNDVAKDEGQTIVFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE MDKLERR IQLKIE EA+K+E DE+S K
Sbjct: 379 YITDRFLPDKAIDLIDEAAARIKMEIDSKPEAMDKLERRTIQLKIEREAVKKETDEASLK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +LE +YA+L++IWK EK   + +  +KEEIEKV+L+I K  R+     V+
Sbjct: 439 RLDLIEQEITRLEKEYADLDEIWKAEKGAAQGTAALKEEIEKVKLEIAKLQREGKLDKVA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L  LE  LK  +  +       NK  LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 499 ELQYGKLPGLEGKLKAATDAEASEQKQPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L  RVVGQDEA+  VS+AIRRSR+GL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 557 GEREKLLKMEDRLHNRVVGQDEAVRLVSDAIRRSRAGLADENKPYGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LCKALAEFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 677 VLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQIIQSMVGEPQ 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AV  EV+ +FRPEF+NRID+++VF  L++KNI SIA IQL  L+ +L +M+M L+
Sbjct: 737 EAVKGAVWQEVRTHFRPEFLNRIDEVVVFHALDQKNIESIARIQLQRLQGRLARMDMTLE 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ AL+KI++ G+D ++GAR
Sbjct: 797 VSELALEKIASAGYDPVFGAR 817


>gi|121595501|ref|YP_987397.1| ATPase [Acidovorax sp. JS42]
 gi|120607581|gb|ABM43321.1| ATPase AAA-2 domain protein [Acidovorax sp. JS42]
          Length = 867

 Score =  872 bits (2252), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/621 (65%), Positives = 529/621 (85%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+ GEVP +L +K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVEGEVPETLKNKRVLVLDMAGLLAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+++ +  II+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 258 KSVLKEVAHEEGRIILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E+TI+ILRGLQ +YE HHGV+ITDPAIVAA+ELS+R
Sbjct: 318 RKYIEKDAALERRFQKVLVDEPSVEDTIAILRGLQVRYEAHHGVDITDPAIVAAAELSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAAKIKIEIDSKPE MDKLERR+IQLKIE EA+K+E DE+S+K
Sbjct: 378 YITDRFLPDKAIDLIDEAAAKIKIEIDSKPESMDKLERRMIQLKIEREAMKKETDEASQK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++E+  +E +YA+LE++WK EK   + S+QI+++I+ +R +I+   RK D+  V+
Sbjct: 438 RLQLIEEELGNVEREYADLEEVWKAEKASAQGSEQIRKDIDAIRTQIDDLKRKGDFNKVA 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG L +LE+ LKE   +D +      K  LL+T+VG+EEIAE+VSR TGIPV+K++Q
Sbjct: 498 ELQYGTLPELEKRLKEA--QDSEAGGTGTKHKLLRTQVGAEEIAEVVSRATGIPVAKMMQ 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL++E  L +RVVGQDEAISAV+NAIRRSRSGLSD  RP GSF+FLGPTGVGKTE
Sbjct: 556 GEKDKLLHMEEKLHERVVGQDEAISAVANAIRRSRSGLSDPNRPLGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALAGFLFDSEEHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M   D 
Sbjct: 676 LLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGQDA 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV  E+K +FRPEF+NRID+ +VF  L+ K+I +IA IQL +L+ +L KM++ L+
Sbjct: 736 EDIKEAVWGELKGHFRPEFLNRIDETVVFHGLDAKHIEAIARIQLRLLEARLAKMDLTLQ 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AA+ +++ +GFD ++GAR
Sbjct: 796 VSPAAMGELAKVGFDPVFGAR 816


>gi|222111721|ref|YP_002553985.1| ATP-dependent chaperone clpb [Acidovorax ebreus TPSY]
 gi|221731165|gb|ACM33985.1| ATP-dependent chaperone ClpB [Acidovorax ebreus TPSY]
          Length = 867

 Score =  871 bits (2251), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/621 (65%), Positives = 529/621 (85%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+ GEVP +L +K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVEGEVPETLKNKRVLVLDMAGLLAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+++ +  II+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 258 KSVLKEVAHEEGRIILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E+TI+ILRGLQ +YE HHGV+ITDPAIVAA+ELS+R
Sbjct: 318 RKYIEKDAALERRFQKVLVDEPSVEDTIAILRGLQVRYEAHHGVDITDPAIVAAAELSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAAKIKIEIDSKPE MDKLERR+IQLKIE EA+K+E DE+S+K
Sbjct: 378 YITDRFLPDKAIDLIDEAAAKIKIEIDSKPESMDKLERRMIQLKIEREAMKKETDEASQK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++E+  +E +YA+LE++WK EK   + S+QI+++I+ +R +I+   RK D+  V+
Sbjct: 438 RLQLIEEELGNVEREYADLEEVWKAEKASAQGSEQIRKDIDAIRTQIDDLKRKGDFNKVA 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG L +LE+ LKE   +D +      K  LL+T+VG+EEIAE+VSR TGIPV+K++Q
Sbjct: 498 ELQYGTLPELEKRLKEA--QDSEAGGTGTKHKLLRTQVGAEEIAEVVSRATGIPVAKMMQ 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL++E  L +RVVGQDEAISAV+NAIRRSRSGLSD  RP GSF+FLGPTGVGKTE
Sbjct: 556 GEKDKLLHMEEKLHERVVGQDEAISAVANAIRRSRSGLSDPNRPLGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALAGFLFDSEEHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M   D 
Sbjct: 676 LLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGQDA 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV  E+K +FRPEF+NRID+ +VF  L+ K+I +IA IQL +L+ +L KM++ L+
Sbjct: 736 EDIKEAVWGELKGHFRPEFLNRIDETVVFHGLDAKHIEAIARIQLRLLEARLAKMDLALQ 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AA+ +++ +GFD ++GAR
Sbjct: 796 VSPAAMGELAKVGFDPVFGAR 816


>gi|149927826|ref|ZP_01916077.1| probable atp-dependent protease (heat shock protein) [Limnobacter
           sp. MED105]
 gi|149823448|gb|EDM82679.1| probable atp-dependent protease (heat shock protein) [Limnobacter
           sp. MED105]
          Length = 862

 Score =  871 bits (2251), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/623 (65%), Positives = 528/623 (84%), Gaps = 7/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP++L +K++L+LD+ALLLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDTLKNKRVLVLDMALLLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++ ++   I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLKDVAADEGQTIVFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV EP +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVGEPSVESTIAILRGLQERYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE MDKL+RR+IQLKIE EA+KRE D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAAARIKMEIDSKPEEMDKLDRRIIQLKIEREAVKREQDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +LE +YA+L++IWK EK  ++ S  IKEEI+ +R +I +  RK DWQ VS
Sbjct: 440 RLALIEEEIVRLEREYADLDEIWKSEKAAVQGSAAIKEEIDHIRAEIEQWKRKGDWQKVS 499

Query: 314 KLKYGELNKLERILKE--KSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +L+YG+L  LE+ L +   ++   + PN      LL+T+VG+EEIAE+VSR TGIPVSK+
Sbjct: 500 ELQYGKLPDLEKKLNDVKDNEGGEKKPNR-----LLRTQVGTEEIAEVVSRATGIPVSKM 554

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           +Q ER+KLL +E  L  RVVGQDEA++ VS+AIRRSR+GLSD  +P GSF+FLGPTGVGK
Sbjct: 555 LQGERDKLLQMEAALHMRVVGQDEAVTLVSDAIRRSRAGLSDPNKPLGSFLFLGPTGVGK 614

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++E+ ++RIDMSEF+EKH++SRL+GAPPGY+GY+EGGYLTE VRRKPY
Sbjct: 615 TELCKALAGFLFDSEDHLVRIDMSEFMEKHTVSRLVGAPPGYVGYDEGGYLTEAVRRKPY 674

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           S+ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+ +   
Sbjct: 675 SVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHEIQRLAGQ 734

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E+IK AVM EVK++FRPEFINR+D+++VF  L+  +I +IA IQL  L+ +L   +M 
Sbjct: 735 DGEVIKAAVMEEVKMHFRPEFINRVDELVVFHALDNAHIANIARIQLQRLQQRLASRDMR 794

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L++S AAL ++   GFD +YGAR
Sbjct: 795 LEVSDAALAEVVKAGFDPLYGAR 817


>gi|194289894|ref|YP_002005801.1| chaperone [Cupriavidus taiwanensis LMG 19424]
 gi|193223729|emb|CAQ69736.1| Chaperone [Cupriavidus taiwanensis LMG 19424]
          Length = 862

 Score =  871 bits (2251), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/621 (66%), Positives = 522/621 (84%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ ++   I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLNDVAKDEGQTIVFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVDEPTVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE MDKLERR IQLKIE EA+K+E DE+S K
Sbjct: 379 YITDRFLPDKAIDLIDEAAARIKMEIDSKPEAMDKLERRTIQLKIEREAVKKETDEASLK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +LE +YA+L++IWK EK   + +  +KEEIEKV+L+I K  R+     V+
Sbjct: 439 RLDLIEQEIARLEKEYADLDEIWKAEKGAAQGTAALKEEIEKVKLEIAKLQREGKLDKVA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L  LE  LK  +  +       NK  LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 499 ELQYGKLPGLEGKLKAATDAEASEQKQPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RVVGQDEA+  VS+AIRRSR+GL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 557 GEREKLLKMEERLHARVVGQDEAVRLVSDAIRRSRAGLADENKPYGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LCKALAEFMFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 677 VLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQIIQSMAGEPQ 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV  EV+ +FRPEF+NRID+++VF  L++KNI SIA IQL  L+ +L +M+M L+
Sbjct: 737 EAIKGAVWQEVRTHFRPEFLNRIDEVVVFHALDQKNIESIARIQLQRLQARLARMDMTLE 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL+KI++ G+D ++GAR
Sbjct: 797 VSDHALEKIASAGYDPVFGAR 817


>gi|71908340|ref|YP_285927.1| ATPase AAA [Dechloromonas aromatica RCB]
 gi|71847961|gb|AAZ47457.1| AAA ATPase, central region:Clp, N terminal [Dechloromonas aromatica
           RCB]
          Length = 863

 Score =  871 bits (2250), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/621 (66%), Positives = 523/621 (84%), Gaps = 3/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP +L  KK+L+LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNEEVPETLKGKKVLVLDMAGLLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++ ++  II+FIDELHTM+G GK EG+IDAGNMLKP L+RGELHCIGATTLNEY
Sbjct: 260 KAVLKEVAQDEGRIILFIDELHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LVEEP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVEEPSVESTIAILRGLQEKYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE+MDKL+RR+IQLKIE EA+K+E DE+SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAAARIKMEIDSKPEVMDKLDRRIIQLKIEREAVKKEKDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R  LI++EI KL  +Y++LE++WK EK+ +  S QIKEEI+ ++  I +  R+     V+
Sbjct: 440 RFGLIEEEIAKLTKEYSDLEEVWKAEKSAVLGSAQIKEEIDHLKADIARLQREGKLGEVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK  ++K  +     NK  LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 500 ELQYGKLPQLEAQLK-AAEKAGEGEGRKNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLLN+E+ L KRVVGQDEA+  V +AIRRSR+GLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 557 GEREKLLNMEDRLHKRVVGQDEAVRLVGDAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LCKALAEFMFDAEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I++M   D 
Sbjct: 677 ILLDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMSGDDY 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
            +IK+AVM EVK YFRPEFINRID+++VF  L+ K+I  IA IQL  L+ +L ++ M + 
Sbjct: 737 GVIKVAVMAEVKNYFRPEFINRIDEVVVFHALDEKHIAGIAKIQLGYLEKRLAQLEMGIV 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +  +AL +++  GFD ++GAR
Sbjct: 797 VEDSALAELAQAGFDPVFGAR 817


>gi|171058702|ref|YP_001791051.1| ATP-dependent chaperone ClpB [Leptothrix cholodnii SP-6]
 gi|170776147|gb|ACB34286.1| ATP-dependent chaperone ClpB [Leptothrix cholodnii SP-6]
          Length = 865

 Score =  870 bits (2249), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/621 (65%), Positives = 518/621 (83%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++ ++  II+FIDELHTM+G GK EG+IDAGNMLKP L+RGELHCIGATTLNEY
Sbjct: 259 KAVLKEVAADEGRIILFIDELHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLNEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKDAA ERRFQK+LV+EP +E T++ILRGLQ+KYEVHHGV+ITDPAI+AA+ELS+R
Sbjct: 319 RKYVEKDAALERRFQKVLVDEPSVEATVAILRGLQEKYEVHHGVQITDPAIIAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y++DRF+PDKAIDLIDEAAAKIKIE+DSKPE MDKL+RRLIQLKIE EA+++E DE S +
Sbjct: 379 YVTDRFLPDKAIDLIDEAAAKIKIEMDSKPESMDKLDRRLIQLKIEREAVRKEKDEGSVR 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R  LI++EI KLE + A+LE+IWK EK   + S+Q  EEIE  RL+I +  RK D+  V+
Sbjct: 439 RFGLIEEEIAKLEREAADLEEIWKAEKAAAQGSKQFMEEIESARLQIEEFKRKGDFNRVA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE+ L +   K+           LL+T VG+EEIAE+VSR TGIPV+K++Q
Sbjct: 499 ELQYGKLPELEKKLHDAQAKEAGKAKGGQGPQLLRTVVGAEEIAEVVSRATGIPVAKLMQ 558

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RVVGQ EAI AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 559 GERDKLLQMEGKLHDRVVGQSEAIIAVSNAIRRSRAGLSDPNRPLGSFLFLGPTGVGKTE 618

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++++ +IRIDMSEF+EKHS+SRLIGAPPGY+GY+EGGYLTE VRRKPYS+
Sbjct: 619 LCKALAGFLFDSDDHMIRIDMSEFMEKHSVSRLIGAPPGYVGYDEGGYLTEAVRRKPYSV 678

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I +M   D 
Sbjct: 679 LLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHQIMQMAGQDT 738

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E+I+ AV  EVK +FRPEF+NRID+ +VF  L++K+I +IA IQL  L  +L KM M L+
Sbjct: 739 ELIREAVWAEVKQHFRPEFLNRIDEAVVFHALDQKHIEAIAQIQLKALAARLGKMEMTLE 798

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL +++ +GFD ++GAR
Sbjct: 799 VSPEALAELAKVGFDPVFGAR 819


>gi|124266742|ref|YP_001020746.1| ATP-dependent protease (heat shock protein) [Methylibium
           petroleiphilum PM1]
 gi|124259517|gb|ABM94511.1| putative ATP-dependent protease (heat shock protein) [Methylibium
           petroleiphilum PM1]
          Length = 867

 Score =  870 bits (2248), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/621 (65%), Positives = 529/621 (85%), Gaps = 1/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+ GEVP SL SK++L+LD+ALLLAG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVAGEVPESLKSKRVLVLDMALLLAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++ ++   I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KSVLKEVAQDEGQTIVFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKDAA ERRFQK+LV EP +E TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYVEKDAALERRFQKVLVGEPSVEATIAILRGLQEKYEVHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAAK+KIEIDSKPE+MD+L+RRLIQLKIE EA+++E DE+S+K
Sbjct: 379 YITDRFLPDKAIDLIDEAAAKVKIEIDSKPEVMDRLDRRLIQLKIEREAVRKEKDEASQK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R  LI+++I KLE + A+L+++WK EK   + S  +KE+I+++R +I +  RK D+  V+
Sbjct: 439 RFGLIEEDIAKLEREAADLDEVWKAEKATAQGSAHLKEDIDRIRTQIEEFKRKGDFNKVA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE+ LK+   K+ +   +  K TLL+T VGSEEIAE+V+R TGIPV+K++Q
Sbjct: 499 ELQYGKLPELEKKLKDAQAKEAKGGVD-GKPTLLRTLVGSEEIAEVVARATGIPVAKLMQ 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL++E  L +RVVGQDEAI AVS++IRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 558 GERQKLLDMEVKLHERVVGQDEAIRAVSDSIRRSRAGLSDPNRPTGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GY+EGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYDEGGYLTEAVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS  I +M   D 
Sbjct: 678 LLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHLIMQMAGQDP 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E+I+ AV  E+K +FRPEF+NRID+ +VF  L+ ++I +IA IQL  L+ +L K+++ L+
Sbjct: 738 ELIREAVWGELKTHFRPEFLNRIDETVVFHALDAQHIEAIAGIQLKALEARLAKLDIRLE 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL +++ +GFD ++GAR
Sbjct: 798 VSAAALSELAKVGFDPVFGAR 818


>gi|160900639|ref|YP_001566221.1| ATP-dependent chaperone ClpB [Delftia acidovorans SPH-1]
 gi|333913063|ref|YP_004486795.1| ATP-dependent chaperone ClpB [Delftia sp. Cs1-4]
 gi|160366223|gb|ABX37836.1| ATP-dependent chaperone ClpB [Delftia acidovorans SPH-1]
 gi|333743263|gb|AEF88440.1| ATP-dependent chaperone ClpB [Delftia sp. Cs1-4]
          Length = 870

 Score =  869 bits (2245), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/620 (65%), Positives = 526/620 (84%), Gaps = 1/620 (0%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+ GEVP SL +K++L LD+A LLAG KYRG+FE+RLK
Sbjct: 202 NPVLIGEPGVGKTAIVEGLAQRIVAGEVPESLKNKRVLSLDMAGLLAGAKYRGDFEERLK 261

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +LKE++  +  II+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR
Sbjct: 262 SVLKEVAQEEGRIILFIDEIHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYR 321

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           +YIEKDAA ERRFQK+LVEEP +E+TI+ILRGLQ +YE HHGV+ITDPAIVAA+ELS+RY
Sbjct: 322 KYIEKDAALERRFQKVLVEEPSVEDTIAILRGLQVRYEAHHGVDITDPAIVAAAELSHRY 381

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DRF+PDKAIDLIDEAAAKIKIEIDSKPE+MDKLERR+IQLKIE EA+K+E DE+S+KR
Sbjct: 382 ITDRFLPDKAIDLIDEAAAKIKIEIDSKPEVMDKLERRMIQLKIEREAMKKEKDEASQKR 441

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L LI++E+  LE +YA+LE++WK EK   + S+QI++EI+++R++I +  RK D+  V++
Sbjct: 442 LQLIEEELGSLEREYADLEEVWKSEKASAQGSEQIRKEIDQIRIQIEELKRKGDFNKVAE 501

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG+L  LE+ L E +Q + Q    A    LL+T VG+EEIAE+VSR TGIPV+K++Q 
Sbjct: 502 LQYGKLPSLEKQLNE-AQANEQGQGGAPAHRLLRTHVGAEEIAEVVSRATGIPVAKMMQG 560

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           E++KLL +E+ L  RVVGQDEAISAV+NAIRRSRSGLSD  RP GSF+FLGPTGVGKTEL
Sbjct: 561 EKDKLLRMEDRLHDRVVGQDEAISAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTEL 620

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L+  +F++E+ ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++
Sbjct: 621 CKALAGFLFDSEDHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVL 680

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M   D +
Sbjct: 681 LLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSLLIQAMVGEDYD 740

Query: 555 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 614
            +K AV  E+K +FRPEF+NRID+ +VF  L+ KNI SIA IQL +L+ +L KM++ L++
Sbjct: 741 DVKDAVWGELKNHFRPEFLNRIDETVVFHALDAKNIESIARIQLKLLERRLEKMDLALQV 800

Query: 615 SKAALKKISNIGFDLIYGAR 634
           S  AL +++ +GFD ++GAR
Sbjct: 801 SDQALAELAKVGFDPVFGAR 820


>gi|383759106|ref|YP_005438091.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Rubrivivax
           gelatinosus IL144]
 gi|381379775|dbj|BAL96592.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Rubrivivax
           gelatinosus IL144]
          Length = 864

 Score =  868 bits (2243), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/621 (65%), Positives = 522/621 (84%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKDKRVLSLDMAGLLAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S ++  II+FIDELHTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLKEVSADEGRIILFIDELHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKDAA ERRFQK+LV+EP +E T++ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYVEKDAALERRFQKVLVDEPSVEATVAILRGLQEKYEVHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAAKIKIEIDSKPE MD+L+RR+IQLKIE EA+K+E DE+S++
Sbjct: 379 YITDRFLPDKAIDLIDEAAAKIKIEIDSKPEAMDRLDRRMIQLKIEREAVKKEQDEASQR 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI+ E+ KL+ +Y +LE+IW  EK   + S Q+KEEI++++ +I +  RK D+  V+
Sbjct: 439 RLGLIEDELLKLQREYNDLEEIWTAEKAQAQGSAQVKEEIDRIKFQIEELKRKGDFNRVA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +L++ LKE   K+           LL+T VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 499 ELQYGKLPELDKRLKEAQAKEAGKAKGGQGPQLLRTMVGAEEIAEVVSRATGIPVSKLMQ 558

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RVVGQDEAISAV++AIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 559 GERDKLLQMEAKLHERVVGQDEAISAVADAIRRSRAGLSDPNRPLGSFLFLGPTGVGKTE 618

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F++E+ +IR+DMSE++EKHS+SRLIGAPPGY+GY+EGG LTE VRRKPYS+
Sbjct: 619 LCKALASFLFDSEDHMIRVDMSEYMEKHSVSRLIGAPPGYVGYDEGGALTEAVRRKPYSV 678

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS  I +M     
Sbjct: 679 LLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHLIMQMSGQPN 738

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E+++ AV  EVK +FRPEF+NRID+ +VF  L+ K+I +IA IQL  L+ +L K+ M L+
Sbjct: 739 EVVREAVWAEVKSHFRPEFLNRIDETVVFHALDEKHIENIARIQLKALEARLEKLEMKLE 798

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL +++ +GFD ++GAR
Sbjct: 799 VSPAALAELAKVGFDPVFGAR 819


>gi|167562511|ref|ZP_02355427.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
           oklahomensis EO147]
          Length = 865

 Score =  867 bits (2239), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/621 (66%), Positives = 526/621 (84%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEQDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +LE +YA+LE+IW  EK  ++ S Q+KEEI+KVR  I +  R+   + V+
Sbjct: 440 RLQLIEEEIRRLEREYADLEEIWTAEKAAVQGSAQLKEEIDKVRADITRLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE   K+ +Q +    +N  +  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLEARHKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL+IE  L +RVVGQ+EAI AV++AIRRSR+GLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLHIEEKLHERVVGQNEAIDAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALAGFLFDTEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQAMSGSSQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV  EVK +FRPEF+NRIDD++VF  L+R NI SIA IQL  L  +L K++M L 
Sbjct: 740 EEIKDAVWGEVKQHFRPEFLNRIDDVVVFHALDRSNIQSIAKIQLARLHERLAKLDMALD 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S++AL++I  +G+D ++GAR
Sbjct: 800 VSESALERIGKVGYDPLFGAR 820


>gi|167569691|ref|ZP_02362565.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Burkholderia
           oklahomensis C6786]
          Length = 865

 Score =  866 bits (2237), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 414/621 (66%), Positives = 526/621 (84%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDE+HTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGRTIVFIDEIHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIK+EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKMEIDSKPEEMDRLDRRLIQLKIEREAVKKEQDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +LE +YA+LE+IW  EK  ++ S Q+KEEI+KVR  I +  R+   + V+
Sbjct: 440 RLQLIEEEIRRLEREYADLEEIWTAEKAAVQGSAQLKEEIDKVRADITRLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE   K+ +Q +    +N  +  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGKLPQLEARHKQVTQAEESEQHNPTRPRLLRTQVGAEEIAEVVSRATGIPVSRMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL+IE  L +RVVGQ+EAI AV++AIRRSR+GLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLHIEEKLHERVVGQNEAIDAVADAIRRSRAGLSDPNRPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALAGFLFDTEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 680 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQAMSGSSQ 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV  EVK +FRPEF+NRIDD++VF  L+R NI SIA IQL  L  +L K++M L 
Sbjct: 740 EEIKDAVWGEVKQHFRPEFLNRIDDVVVFHALDRSNIQSIAKIQLARLHERLAKLDMALD 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S++AL++I  +G+D ++GAR
Sbjct: 800 VSESALEQIGKVGYDPLFGAR 820


>gi|430807090|ref|ZP_19434205.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Cupriavidus
           sp. HMR-1]
 gi|429500631|gb|EKZ98994.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Cupriavidus
           sp. HMR-1]
          Length = 862

 Score =  865 bits (2236), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/621 (65%), Positives = 525/621 (84%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLVLDMAGLLAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ ++   I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTLNEY
Sbjct: 259 KAVLNDVAKDEGQTIVFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLNEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HH VEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHKVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE MDKLERR IQLKIE EA+K+E DE+S+K
Sbjct: 379 YITDRFLPDKAIDLIDEAAARIKMEIDSKPEAMDKLERRTIQLKIEREAVKKETDEASRK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +LE +YA+L++IW+ EK   + +  +KEEIEK++L I +  R+     V+
Sbjct: 439 RLELIEQEIIRLEKEYADLDEIWRAEKGAAQGAAALKEEIEKIKLDITRLQREGKLDKVA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  L+  ++ +       NK  LL+T+VG+EEIAE+VSR TGIPV+K++Q
Sbjct: 499 ELQYGKLPELEGKLQAATKAEASEQKQQNK--LLRTQVGAEEIAEVVSRATGIPVAKMMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L +RVVGQDEA+  VS+AIRRSR+GLSD  +PYGSF+FLGPTGVGKTE
Sbjct: 557 GEREKLLKMEDRLHQRVVGQDEAVRLVSDAIRRSRAGLSDENKPYGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK LS  +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GY+EGGYLTE VRRKPY++
Sbjct: 617 LCKALSEFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYDEGGYLTEAVRRKPYAV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 677 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHIIQSMAGEPQ 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AV  EV+ +FRPEF+NRID+++VF  L++KNI SIA IQL  L+ +L +M+M L 
Sbjct: 737 EAVKGAVWQEVRTHFRPEFLNRIDEVVVFHALDQKNIESIAKIQLKRLQVRLARMDMTLD 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ AL+KI++ G+D ++GAR
Sbjct: 797 VSERALEKIASAGYDPVFGAR 817


>gi|94310897|ref|YP_584107.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Cupriavidus
           metallidurans CH34]
 gi|93354749|gb|ABF08838.1| ATP-dependent Clp protease, ATP-binding subunit ClpB (protein
           disaggregation chaperone) [Cupriavidus metallidurans
           CH34]
          Length = 862

 Score =  865 bits (2235), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/621 (65%), Positives = 525/621 (84%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLVLDMAGLLAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ ++   I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTLNEY
Sbjct: 259 KAVLNDVAKDEGQTIVFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLNEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HH VEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHKVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE MDKLERR IQLKIE EA+K+E DE+S+K
Sbjct: 379 YITDRFLPDKAIDLIDEAAARIKMEIDSKPEAMDKLERRTIQLKIEREAVKKETDEASRK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +LE +YA+L++IW+ EK   + +  +KEEIEK++L I +  R+     V+
Sbjct: 439 RLELIEQEIIRLEKEYADLDEIWRAEKGAAQGAAALKEEIEKIKLDITRLQREGKLDKVA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  L+  ++ +       NK  LL+T+VG+EEIAE+VSR TGIPV+K++Q
Sbjct: 499 ELQYGKLPELEGKLQAATKAEASEQKQQNK--LLRTQVGAEEIAEVVSRATGIPVAKMMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L +RVVGQDEA+  VS+AIRRSR+GLSD  +PYGSF+FLGPTGVGKTE
Sbjct: 557 GEREKLLKMEDRLHQRVVGQDEAVRLVSDAIRRSRAGLSDENKPYGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK LS  +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GY+EGGYLTE VRRKPY++
Sbjct: 617 LCKALSEFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYDEGGYLTEAVRRKPYAV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS  I+ M    +
Sbjct: 677 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHIIQSMAGEPQ 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AV  EV+ +FRPEF+NRID+++VF  L++KNI SIA IQL  L+ +L +M+M L 
Sbjct: 737 EAVKGAVWQEVRTHFRPEFLNRIDEVVVFHALDQKNIESIAKIQLKRLQVRLARMDMTLD 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ AL+KI++ G+D ++GAR
Sbjct: 797 VSERALEKIASAGYDPVFGAR 817


>gi|300691677|ref|YP_003752672.1| chaperone [Ralstonia solanacearum PSI07]
 gi|299078737|emb|CBJ51397.1| Chaperone [Ralstonia solanacearum PSI07]
 gi|344169981|emb|CCA82355.1| chaperone [blood disease bacterium R229]
          Length = 862

 Score =  865 bits (2235), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/621 (65%), Positives = 522/621 (84%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP SL +K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+  +   I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLNDIAKEEGQTILFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEA A+IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 379 YITDRFLPDKAIDLIDEAGARIKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L+ +YA+LE+IWK EK   + +  +KEEI+K RL+I K  R+     V+
Sbjct: 439 RLELIEQEIERLQKEYADLEEIWKAEKGAAQGAAALKEEIDKTRLEIAKLQREGKLDKVA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK  +  +       NK  LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 499 ELQYGKLPELEGKLKAATAAEASGQTQPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RVVGQDEA+  VS+AIRRSR+G+SD  +PYGSF+FLGPTGVGKTE
Sbjct: 557 GERDKLLRMEDRLHERVVGQDEAVRLVSDAIRRSRAGISDENKPYGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LCKALAGFLFDSEEHMIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS  I++M     
Sbjct: 677 VLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQMIQQMATEPL 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           ++IK AV  EVK +FRPEF+NRID+++VF  L++ +I SIA IQL  L  +L  M++ L+
Sbjct: 737 DVIKGAVWQEVKTHFRPEFLNRIDEVVVFHALDQTHIESIARIQLQRLAARLAHMDLTLE 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           I+ AA+ K+++ G+D ++GAR
Sbjct: 797 ITDAAVAKLASAGYDPVFGAR 817


>gi|398804069|ref|ZP_10563072.1| ATP-dependent chaperone ClpB [Polaromonas sp. CF318]
 gi|398095077|gb|EJL85427.1| ATP-dependent chaperone ClpB [Polaromonas sp. CF318]
          Length = 866

 Score =  865 bits (2235), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/621 (65%), Positives = 524/621 (84%), Gaps = 1/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+ GEVP+SL  K++L LD+A LLAG K+RGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVAGEVPDSLKGKRVLSLDMAALLAGAKFRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 258 KTVLNELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQKILV EP +E TI+ILRGLQ+KYE HHGV+ITDPAIVAA+ELS+R
Sbjct: 318 RKYIEKDAALERRFQKILVGEPTVEATIAILRGLQEKYEAHHGVQITDPAIVAAAELSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAAKIKIE+DSKPE+MDKL+RRLIQL+IE EA++RE DE+S+K
Sbjct: 378 YITDRFLPDKAIDLIDEAAAKIKIEMDSKPEVMDKLDRRLIQLQIEREAVRREKDEASQK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R  LI++EI KL+ + ++L++IW+ EK     S+ + EEI+++R +I + TRK D+  V+
Sbjct: 438 RFELIEEEIAKLQKEISDLDEIWQAEKAQALGSKDVMEEIDRIRFQIEEFTRKGDFNKVA 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE+ LKE +Q        +N  TLL+T+VG+EEIAE+V+R TGIPVSK++Q
Sbjct: 498 ELQYGKLPELEKRLKE-AQDSEASKGKSNAPTLLRTQVGAEEIAEVVARATGIPVSKLMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RVVGQDEAISAV+NAIRRSRSGLSD  RP GSF+FLGPTGVGKTE
Sbjct: 557 GERDKLLQMEGKLHERVVGQDEAISAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IR+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LCKALAGFLFDSEDHLIRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M     
Sbjct: 677 LLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSPIIQSMVGKPT 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV +E+K YFRPEF+NRID+ +VF  L+ KNI SIA IQL +L  +L KM++ L 
Sbjct: 737 EEIKDAVTDELKNYFRPEFLNRIDETVVFHALDAKNIESIARIQLKVLIARLQKMDLTLD 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+AA+ +++ +GFD ++GAR
Sbjct: 797 VSEAAIAELAKVGFDPVFGAR 817


>gi|375105822|ref|ZP_09752083.1| ATP-dependent chaperone ClpB [Burkholderiales bacterium JOSHI_001]
 gi|374666553|gb|EHR71338.1| ATP-dependent chaperone ClpB [Burkholderiales bacterium JOSHI_001]
          Length = 862

 Score =  864 bits (2233), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/621 (66%), Positives = 526/621 (84%), Gaps = 1/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+ GEVP +L  K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVAGEVPETLKDKRVLVLDMAGLLAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++ ++  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTLNEY
Sbjct: 258 KAVLKEVAQDEGRIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLNEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKDAA ERRFQK++V+EP +E TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+R
Sbjct: 318 RKYVEKDAALERRFQKVMVDEPSVEATIAILRGLQEKYEVHHGVEITDPAIVAAAELSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAAKIKIEIDSKPE+MD+L+RR+IQLKIE EA+K+E DE+S+K
Sbjct: 378 YITDRFLPDKAIDLIDEAAAKIKIEIDSKPEVMDRLDRRMIQLKIEREAVKKERDEASQK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L+++E+ KL+ +Y +LE+IWK EK   + S Q+KEEI++ R +I +  RK ++  V+
Sbjct: 438 RLGLLEEELLKLQREYNDLEQIWKAEKATAQGSAQVKEEIDRSRFQIEEYKRKGNFDKVA 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG L +LE+ LKE   K+      A    LL+T VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 498 ELQYGRLPELEKRLKEAQAKEAGKKGGAAP-QLLRTMVGAEEIAEVVSRATGIPVSKLMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RVVGQDEAI+AVS+AIRRSRSGLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 557 GERDKLLKMEDKLHERVVGQDEAITAVSDAIRRSRSGLSDPNRPYGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IR+DMSE++EKHS+SR+IGAPPGY+GY+EGG LTE VRRKPYS+
Sbjct: 617 LCKALANFLFDSEDHLIRVDMSEYMEKHSVSRMIGAPPGYVGYDEGGALTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT++VMTSNLGS +I +M     
Sbjct: 677 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVVVMTSNLGSHQIMQMVGQSS 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E I+ AV  EVK +FRPEF+NRID+ +VF  L++KNI SIA IQL IL+ +L +M M L+
Sbjct: 737 EDIRDAVWAEVKEHFRPEFLNRIDETVVFHALDQKNIESIARIQLRILEQRLARMEMKLE 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL +I+ +GFD ++GAR
Sbjct: 797 VSAEALAEIAKVGFDPVFGAR 817


>gi|344171531|emb|CCA84146.1| chaperone [Ralstonia syzygii R24]
          Length = 862

 Score =  864 bits (2232), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/621 (65%), Positives = 522/621 (84%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+  +   I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLNDIAKEEGQTILFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEA A+IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 379 YITDRFLPDKAIDLIDEAGARIKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L+ +YA+LE+IWK EK   + +  +KEEI+K RL+I K  R+     V+
Sbjct: 439 RLELIEQEIERLQKEYADLEEIWKAEKGAAQGAAALKEEIDKTRLEIAKLQREGKLDKVA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK  +  +       NK  LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 499 ELQYGKLPELEGKLKAATAAEASGQKQPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RVVGQDEA+  VS+AIRRSR+G+SD  +PYGSF+FLGPTGVGKTE
Sbjct: 557 GERDKLLRMEDRLHERVVGQDEAVRLVSDAIRRSRAGISDENKPYGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LCKALAGFLFDSEEHMIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS  I++M     
Sbjct: 677 VLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQMIQQMATEPL 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           ++IK AV  EVK +FRPEF+NRID+++VF  L++ +I SIA IQL  L  +L  M++ L+
Sbjct: 737 DVIKGAVWQEVKTHFRPEFLNRIDEVVVFHALDQTHIESIARIQLQRLAARLAHMDLTLE 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           I+ AA+ K+++ G+D ++GAR
Sbjct: 797 ITDAAVAKLASAGYDPVFGAR 817


>gi|372488803|ref|YP_005028368.1| ATP-dependent chaperone ClpB [Dechlorosoma suillum PS]
 gi|359355356|gb|AEV26527.1| ATP-dependent chaperone ClpB [Dechlorosoma suillum PS]
          Length = 861

 Score =  864 bits (2232), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/623 (65%), Positives = 526/623 (84%), Gaps = 7/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP +L  KK+L+LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPETLKGKKVLVLDMAGLLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++  II+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDEGRIILFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE+MDKL+RR+IQLKIE EA+K+E DE+SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAAARIKMEIDSKPEVMDKLDRRIIQLKIEREAVKKEKDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R  LI+ EI KL+ +Y++LE++WK EK  +  +  +KEEI+K++ +I +  R+   + V+
Sbjct: 440 RFGLIEDEIAKLQKEYSDLEEVWKAEKAQVHGAAHVKEEIDKIKAEIARLQREGKLEKVA 499

Query: 314 KLKYGELNKLERILK--EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +L+YG+L +LE  LK  EK+ +  Q  N      LL+T+VG+EEIAE+VSR TGIPVSK+
Sbjct: 500 ELQYGKLPQLEAQLKVAEKASEGGQQQNK-----LLRTQVGAEEIAEVVSRATGIPVSKM 554

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           +Q ER+KLL +E+ L +RVVGQDEA+  VS+AIRRSR+GLSD  RPYGSF+FLGPTGVGK
Sbjct: 555 MQGERDKLLKMEDRLHQRVVGQDEAVRLVSDAIRRSRAGLSDPNRPYGSFLFLGPTGVGK 614

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGG LTE VRRKPY
Sbjct: 615 TELCKALAEFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGTLTEAVRRKPY 674

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           S+ILLDE+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I++M   
Sbjct: 675 SVILLDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMAGD 734

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D ++IKLAVM EVK YFRPEFINRID+ +VF  L+ KNI +IA IQL  L+ ++ ++ M 
Sbjct: 735 DYQLIKLAVMGEVKSYFRPEFINRIDEAVVFHSLDEKNIRNIARIQLGYLEKRVAQLEMR 794

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L+++ +AL +++  GFD I+GAR
Sbjct: 795 LEVADSALDELAKAGFDPIFGAR 817


>gi|332529046|ref|ZP_08405011.1| ATPase [Hylemonella gracilis ATCC 19624]
 gi|332041490|gb|EGI77851.1| ATPase [Hylemonella gracilis ATCC 19624]
          Length = 874

 Score =  863 bits (2231), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/622 (65%), Positives = 525/622 (84%), Gaps = 1/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL  K++L+LD+A LLAG K+RGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRDKRVLVLDMAGLLAGAKFRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++ ++  II+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLKEVAQDEGRIILFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LVEEP +E+TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVEEPTVEQTIAILRGLQEKYEVHHGVDITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAAKIKIEIDSKPE+MDKL+RR+IQLKIE EA+K+E DE+S+K
Sbjct: 379 YITDRFLPDKAIDLIDEAAAKIKIEIDSKPEVMDKLDRRMIQLKIEREAMKKETDEASQK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI KL+ + A+LE+IWK EK   +  Q ++EEIEK++ +I + TRK D+  V+
Sbjct: 439 RLALIEEEIGKLQKEAADLEEIWKLEKAQAQGGQHLREEIEKLKGQIEELTRKGDFNRVA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFT-LLKTKVGSEEIAEIVSRTTGIPVSKIV 372
           +L+YG+L +LE+ L E    +       +K   LL+T VG+EEIAE+VSR TGIPV+K++
Sbjct: 499 ELQYGKLPELEKRLNEVQASEAAGAGGGSKTPRLLRTLVGAEEIAEVVSRATGIPVAKMM 558

Query: 373 QVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKT 432
           Q E++KLL +E+ L +RVVGQ+EAI+AV+NAIRRSRSGLSD  RP GSF+FLGPTGVGKT
Sbjct: 559 QGEKDKLLRMEDKLHERVVGQEEAIAAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKT 618

Query: 433 ELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYS 492
           ELCK L+  +F++ + ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS
Sbjct: 619 ELCKALAGFLFDSVDHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYS 678

Query: 493 LILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGD 552
           ++LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M    
Sbjct: 679 VVLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQLIQNMAGRS 738

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K AV  E+K YFRPEF+NR+D+ +VF  L+  NI SIA IQL  L+++L+KM + L
Sbjct: 739 YDDVKDAVWGELKNYFRPEFLNRVDETVVFHGLDAANIASIAKIQLQALQDRLVKMELSL 798

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +S  AL +++ +GFD ++GAR
Sbjct: 799 HVSDKALAELAKVGFDPVFGAR 820


>gi|398808737|ref|ZP_10567597.1| ATP-dependent chaperone ClpB [Variovorax sp. CF313]
 gi|398087089|gb|EJL77687.1| ATP-dependent chaperone ClpB [Variovorax sp. CF313]
          Length = 873

 Score =  863 bits (2230), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/621 (65%), Positives = 522/621 (84%), Gaps = 1/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+ GEVP SL  K++L LD+A LLAG K+RGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVAGEVPESLKGKRVLSLDMAALLAGAKFRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 258 KTVLNELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQKI+V EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS R
Sbjct: 318 RKYIEKDAALERRFQKIIVGEPSVEATIAILRGLQEKYEVHHGVQITDPAIVAAAELSDR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAAKIKIE+DSKPE+MD+L+RRLIQL+IE EA++RE DE+S+K
Sbjct: 378 YITDRFLPDKAIDLIDEAAAKIKIEMDSKPEVMDRLDRRLIQLQIEREAVRREKDEASQK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI+ EI KL+ + A+ ++IW+ EK   + S Q++E+++K++ +I +  RK D+  V+
Sbjct: 438 RLGLIEGEIEKLQKEIADYDEIWQAEKAQAQGSAQVREDVDKIKFQIEEWKRKGDFNKVA 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L  LE+ LKE    +      ++  TLL+T+VGSEEIAE+V+R TGIPV+K++Q
Sbjct: 498 ELQYGQLPALEKRLKEAEASEAS-KGKSSAPTLLRTQVGSEEIAEVVARATGIPVAKLMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RVVGQDEAI AV+NAIRRSRSGLSD  RP GSF+FLGPTGVGKTE
Sbjct: 557 GERDKLLVMEDKLHERVVGQDEAIGAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LCKALAGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M     
Sbjct: 677 VLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSPIIQAMVGKPS 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV +E+K YFRPEF+NRID+ +VF  L+ KNI SIA IQL +L+ +L KM++ L+
Sbjct: 737 EEIKEAVWDELKNYFRPEFLNRIDETVVFHALDAKNIESIAAIQLKVLQARLAKMDLGLE 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL +I+ +GFD ++GAR
Sbjct: 797 VSPAALAEIAKVGFDPVFGAR 817


>gi|337280035|ref|YP_004619507.1| heat shock protein [Ramlibacter tataouinensis TTB310]
 gi|334731112|gb|AEG93488.1| Candidate heat shock protein [Ramlibacter tataouinensis TTB310]
          Length = 874

 Score =  863 bits (2230), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/621 (65%), Positives = 522/621 (84%), Gaps = 1/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+ GEVP SL +K++L LD+A LLAG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVAGEVPESLKNKRVLSLDMAALLAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 258 KSVLTELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQKILV EP +E TI+ILRGLQ+KYE HHGV+ITDPAIVAA+ELS+R
Sbjct: 318 RKYIEKDAALERRFQKILVGEPTVEATIAILRGLQEKYEAHHGVDITDPAIVAAAELSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIKIEIDSKPE +D+L+RR+IQL+IE EA+++E DE+S+K
Sbjct: 378 YITDRFLPDKAIDLIDEAASKIKIEIDSKPEAIDRLDRRMIQLQIEREAMRKETDEASQK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI+ EI KL  + A+LE IWK EK   + S QI+EE+++VR +I +  RK+D+  V+
Sbjct: 438 RLALIEDEIAKLRKEIADLEDIWKAEKAAAQGSAQIREEMDRVRFQIEEFKRKADFNKVA 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG L +LER LKE +Q        A K  LL+T+VG+EEIAE+V+R TGIPVSK++Q
Sbjct: 498 ELQYGRLPELERKLKE-AQDAEAGKAKAGKAQLLRTQVGAEEIAEVVARATGIPVSKLMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RVVGQDEAI+AV+NAIRRSRSGL+D  RP GSF+FLGPTGVGKTE
Sbjct: 557 GEREKLLQMEERLHQRVVGQDEAIAAVANAIRRSRSGLADPNRPTGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IR+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LCKALATFLFDSEEHLIRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M     
Sbjct: 677 ILLDEVEKAHHDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHMIQAMVGRPY 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AV +E+K +FRPEF+NRID+ +VF  L+  +I  IA IQL +L+ +L KM++ L+
Sbjct: 737 EDVKEAVWDELKNHFRPEFLNRIDETVVFHGLHAAHIARIARIQLGVLEQRLAKMDLTLQ 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+AAL++++ +GFD ++GAR
Sbjct: 797 VSEAALEELAKVGFDPVFGAR 817


>gi|241766421|ref|ZP_04764297.1| ATP-dependent chaperone ClpB [Acidovorax delafieldii 2AN]
 gi|241363400|gb|EER58901.1| ATP-dependent chaperone ClpB [Acidovorax delafieldii 2AN]
          Length = 868

 Score =  863 bits (2229), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/621 (64%), Positives = 522/621 (84%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+ GEVP SL  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVAGEVPESLKGKRVLSLDMAALLAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 258 KTVLNELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQKILV EP +E TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+R
Sbjct: 318 RKYIEKDAALERRFQKILVGEPTVEATIAILRGLQEKYEVHHGVEITDPAIVAAAELSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIKIEIDSKPE+MD+L+RRLIQL+IE EA++RE DE+S+K
Sbjct: 378 YITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDRLDRRLIQLQIEREAVRREKDEASQK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R  LI++EI  L+ + A+L++IW+ EK   + SQQ++E++E+V+ +I +  RK D+  V+
Sbjct: 438 RFGLIEEEIASLQKEIADLDEIWQSEKAQAQGSQQVREQVEQVKQQIEELKRKGDFNKVA 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L  LE+ LKE   K+      +    LL+T+VG+EEIAE+VSR TGIPV+K++Q
Sbjct: 498 ELQYGKLPDLEKQLKEAQAKEEGKDGTSAPNRLLRTQVGAEEIAEVVSRATGIPVAKMMQ 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +E  L +RVVGQ+EAI+AV+NAIRRSRSGLSD  RP GSF+FLGPTGVGKTE
Sbjct: 558 GEKDKLLQMETKLHERVVGQEEAIAAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M   D 
Sbjct: 678 LLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGQDS 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + IK AV  E+K +FRPEF+NRID+ +VF  L+  +I +IA IQL +L+++L KM++ L 
Sbjct: 738 DDIKEAVWGELKNHFRPEFLNRIDETVVFHALDAAHIEAIARIQLQLLESRLAKMDLALD 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL +++ +GFD ++GAR
Sbjct: 798 VSPAALAELAKVGFDPVFGAR 818


>gi|445497963|ref|ZP_21464818.1| ATP-dependent Clp protease ATP-binding subunit ClpB
           [Janthinobacterium sp. HH01]
 gi|444787958|gb|ELX09506.1| ATP-dependent Clp protease ATP-binding subunit ClpB
           [Janthinobacterium sp. HH01]
          Length = 862

 Score =  863 bits (2229), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 416/621 (66%), Positives = 527/621 (84%), Gaps = 1/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP+SL  K++L LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNNEVPDSLKGKRVLSLDMAALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++ ++   I+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLKELAMDEGQTIVFIDEMHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQKILV+EP +E TI+ILRGLQ KYE+HH V I+D AI+AA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKILVDEPSVEATIAILRGLQDKYELHHKVAISDAAIIAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIKIEIDSKPE+MDKLERRLIQLKIE EA+K+E DE S++
Sbjct: 380 YITDRFLPDKAIDLIDEAASKIKIEIDSKPEVMDKLERRLIQLKIEKEAVKKEKDEGSRR 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI +L+ +  + E+I K EK +++ S  IKEEIE+++L++ +ATR S+WQ VS
Sbjct: 440 RLDLIDEEILRLQRELNDYEEILKAEKAVVQGSTHIKEEIERIKLQMEQATRDSNWQRVS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG L +LE  LK+    +++    A K  LL+T+VG+EEIAE+VSR TGIPVS+++Q
Sbjct: 500 ELQYGRLPELEAQLKQAESVNLK-AGEAAKPKLLRTEVGAEEIAEVVSRATGIPVSRMMQ 558

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL+IE  L +RVVGQDEAI+AVS+AIRRSR+GLSD  RPYGSFMFLGPTGVGKTE
Sbjct: 559 GERDKLLHIEEKLHERVVGQDEAIAAVSDAIRRSRAGLSDPNRPYGSFMFLGPTGVGKTE 618

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ EES+IRIDMSEF+EKHS++RLIGAPPGY+GY+EGGYLTE VRRKPYS+
Sbjct: 619 LTKALAGFLFDTEESMIRIDMSEFMEKHSVARLIGAPPGYVGYDEGGYLTEAVRRKPYSV 678

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ LDDGR+TD +GRT++F+NT+I+MTSNLGS KI+ ME  D 
Sbjct: 679 ILLDEVEKAHPDVFNVLLQALDDGRMTDGQGRTVDFKNTVIIMTSNLGSHKIQAMEDSDP 738

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
            ++KLAVM EV+ +FRPEFINRID+I+VF  L+ KNI +IA IQL IL+ +L KM M L 
Sbjct: 739 GVVKLAVMAEVRSHFRPEFINRIDEIVVFHGLDEKNIGAIAKIQLAILEQRLAKMEMTLT 798

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           I++AAL KI+  G+D +YGAR
Sbjct: 799 ITEAALHKIAEAGYDPVYGAR 819


>gi|421888400|ref|ZP_16319495.1| Chaperone [Ralstonia solanacearum K60-1]
 gi|378966210|emb|CCF96243.1| Chaperone [Ralstonia solanacearum K60-1]
          Length = 862

 Score =  862 bits (2228), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/621 (65%), Positives = 522/621 (84%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K +L+LD+A LLAG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKHVLVLDMAGLLAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+  +   I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLNDIAKEEGQTILFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 379 YITDRFLPDKAIDLIDEAAARIKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L+ +YA+LE+IWK EK   + +  +KEEI+KV+L+I +  R+     V+
Sbjct: 439 RLELIEQEIERLQKEYADLEEIWKAEKGAAQGAAAVKEEIDKVKLEITRLQREGKLDKVA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK  +  +     + NK  LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 499 ELQYGKLPELEGKLKAATAAEASGQKSPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RVVGQDEA+  VS+AIRRSR+G++D  +PYGSF+FLGPTGVGKTE
Sbjct: 557 GERDKLLRMEDRLHERVVGQDEAVRLVSDAIRRSRAGIADENKPYGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LCKALAGFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS  I+ M     
Sbjct: 677 VLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQSMAGESF 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           ++IK AV  EVK +FRPEF+NRID+++VF  L++ NI SIA IQL  L  +L  M++ L 
Sbjct: 737 DVIKGAVWQEVKTHFRPEFLNRIDEVVVFHSLDQGNIESIARIQLKRLAARLAHMDLTLD 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K++++G+D ++GAR
Sbjct: 797 VSDEALAKLASVGYDPVFGAR 817


>gi|17546054|ref|NP_519456.1| ATP-dependent protease [Ralstonia solanacearum GMI1000]
 gi|54035873|sp|Q8XZR0.1|CLPB_RALSO RecName: Full=Chaperone protein ClpB
 gi|17428350|emb|CAD15037.1| probable chaperone clpb protein [Ralstonia solanacearum GMI1000]
          Length = 862

 Score =  862 bits (2228), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/621 (65%), Positives = 522/621 (84%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP SL +K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+  +   I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLNDIAKEEGQTILFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 379 YITDRFLPDKAIDLIDEAAARIKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L+ +YA+LE+IWK EK   + +  +KEEI++V+L+I +  R+     V+
Sbjct: 439 RLELIEQEIERLQKEYADLEEIWKAEKGAAQGAAAVKEEIDRVKLEIARLQREGKLDKVA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG L +LE  LK  +  +       NK  LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 499 ELQYGRLPELEGKLKAATAAEASGQRPPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RVVGQDEA+  VS+AIRRSR+G++D  +PYGSF+FLGPTGVGKTE
Sbjct: 557 GERDKLLRMEDRLHERVVGQDEAVRLVSDAIRRSRAGIADENKPYGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LCKALAGFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS  I++M     
Sbjct: 677 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQQMASESP 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           ++IK AV  EVK +FRPEF+NRID+++VF  L++ +I SIA IQL  L  +L  M++ L+
Sbjct: 737 DVIKGAVWQEVKTHFRPEFLNRIDEVVVFHALDQGHIESIARIQLQRLAARLAHMDLTLE 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           IS  A+ K+++ G+D ++GAR
Sbjct: 797 ISDPAVAKLASAGYDPVFGAR 817


>gi|351731245|ref|ZP_08948936.1| ATPase [Acidovorax radicis N35]
          Length = 868

 Score =  862 bits (2227), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/622 (65%), Positives = 527/622 (84%), Gaps = 2/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+ GEVP SL +K++L LD+A LLAG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVAGEVPESLKNKRVLSLDMAALLAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 258 KSVLSELAKDEGQTIVFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQKILV EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+R
Sbjct: 318 RKYIEKDAALERRFQKILVGEPTVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIKIE+DSKPE+MDKL+RRLIQL+IE EA++RE DESS+K
Sbjct: 378 YITDRFLPDKAIDLIDEAASKIKIEMDSKPEVMDKLDRRLIQLQIEREAVRREKDESSQK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R  LI++EI KL+ + A+ ++IW+ EK   + S  ++E I+K++ +I + TRK D+  V+
Sbjct: 438 RFALIEEEITKLQKEIADYDEIWQSEKAQAQGSAHVREAIDKLKFQIEEFTRKGDFNKVA 497

Query: 314 KLKYGELNKLERILKE-KSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIV 372
           +L+YG+L  LER LKE ++Q+D +    A +  LL+T+VG+EEIAE+VSR TGIPV+K++
Sbjct: 498 ELQYGKLPDLERQLKEAQAQEDGKDGAPAAR-RLLRTQVGAEEIAEVVSRATGIPVAKMM 556

Query: 373 QVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKT 432
           Q E++KLL +E  L +RVVGQ EAI+AV+NAIRRSRSGLSD  RP GSF+FLGPTGVGKT
Sbjct: 557 QGEKDKLLQMETKLHERVVGQQEAIAAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKT 616

Query: 433 ELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYS 492
           ELCK L+  +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS
Sbjct: 617 ELCKALAGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYS 676

Query: 493 LILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGD 552
           ++LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M   D
Sbjct: 677 VLLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGQD 736

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E IK AV  E+K +FRPEF+NRID+ +VF  L+ ++I SIA IQL +L+ +L KM+++L
Sbjct: 737 SEDIKEAVWGELKNHFRPEFLNRIDETVVFHALDAQHIASIAKIQLQLLQTRLAKMDLEL 796

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S AAL +++ +GFD ++GAR
Sbjct: 797 QVSDAALAELAKVGFDPVFGAR 818


>gi|237748625|ref|ZP_04579105.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Oxalobacter
           formigenes OXCC13]
 gi|229379987|gb|EEO30078.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Oxalobacter
           formigenes OXCC13]
          Length = 864

 Score =  862 bits (2226), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/621 (66%), Positives = 532/621 (85%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP SL  K++L LD+A LLAG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPESLKGKRVLALDMAALLAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++ ++   I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKDEGQDIVFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQKI+V+EP +E+TI+ILRGLQ+KYE+HHGVEITDPAI+AA+ELS R
Sbjct: 320 RKYIEKDAALERRFQKIMVDEPTVEDTIAILRGLQEKYELHHGVEITDPAIIAAAELSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+EIDSKPE+MDKL+RR+IQLKIE EA+K+E DE+S K
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDEASLK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EINKLE +YA+ ++I K EK  ++ S+ IKEEIEKVRL++++A R+ D+Q +S
Sbjct: 440 RLALIEEEINKLEKEYADYDEILKAEKAGVEGSKHIKEEIEKVRLEMDEAKRRGDFQKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L YG+L +LE+ L    QK+ +L  +  K  LL+T V +EEIAE+VSR TGIPVSK++Q
Sbjct: 500 ELMYGKLPELEKALAADDQKETKLETDHPK--LLRTHVDAEEIAEVVSRATGIPVSKMMQ 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL++E+ L KRVVGQ EAI AVS AIRRSR+GLSD  RPYGSFMFLGPTGVGKTE
Sbjct: 558 GERDKLLHMEDYLHKRVVGQHEAIVAVSEAIRRSRAGLSDPNRPYGSFMFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F+ E+++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALASFLFDTEDAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M   ++
Sbjct: 678 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSHLIQSMTGSEQ 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           +++K+AVM+EV+ +FRPEFINR+D+I+VF  L+ KNI +IA IQL +L  +L KM M L 
Sbjct: 738 DLVKVAVMDEVRKHFRPEFINRVDEIVVFHALDEKNIGAIAKIQLELLNKRLEKMEMSLD 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ AL KI+  GFD ++GAR
Sbjct: 798 VSEKALHKIAEAGFDPLFGAR 818


>gi|386333685|ref|YP_006029855.1| chaperone [Ralstonia solanacearum Po82]
 gi|334196134|gb|AEG69319.1| chaperone [Ralstonia solanacearum Po82]
          Length = 862

 Score =  862 bits (2226), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/621 (65%), Positives = 521/621 (83%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+  +   I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLNDIAKEEGQTILFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 379 YITDRFLPDKAIDLIDEAAARIKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L+ +YA+LE+IWK EK   + +  +KEEI+KV+L+I +  R+     V+
Sbjct: 439 RLELIEQEIERLQKEYADLEEIWKAEKGAAQGAAAVKEEIDKVKLEITRLQREGKLDKVA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG L +LE  LK  +  +       NK  LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 499 ELQYGRLPELEGKLKAATAAEASGQKPPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RVVGQDEA+  VS+AIRRSR+G++D  +PYGSF+FLGPTGVGKTE
Sbjct: 557 GERDKLLRMEDRLHERVVGQDEAVRLVSDAIRRSRAGIADENKPYGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LCKALAGFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS  I+ M     
Sbjct: 677 VLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQSMAGESF 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           ++IK AV  EVK +FRPEF+NRID+++VF  L++ NI SIA IQL  L  +L  M++ L+
Sbjct: 737 DVIKGAVWQEVKTHFRPEFLNRIDEVVVFHSLDQGNIESIARIQLKRLAARLAHMDLTLE 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           IS  A+ K+++ G+D ++GAR
Sbjct: 797 ISDEAVAKLASAGYDPVFGAR 817


>gi|121610528|ref|YP_998335.1| ATPase [Verminephrobacter eiseniae EF01-2]
 gi|121555168|gb|ABM59317.1| ATPase AAA-2 domain protein [Verminephrobacter eiseniae EF01-2]
          Length = 867

 Score =  862 bits (2226), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/620 (63%), Positives = 523/620 (84%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+ GEVP SL  K++L LD+A LLAG K+RGEFE+RLK
Sbjct: 199 NPVLIGEPGVGKTAIVEGLAQRIVAGEVPESLKGKRVLSLDMAALLAGAKFRGEFEERLK 258

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L E++ +Q   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 259 AVLTELAKDQGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYR 318

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           +YIEKDAA ERRFQKILV+EP +E +I+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS RY
Sbjct: 319 KYIEKDAALERRFQKILVDEPTVEASIAILRGLQEKYEVHHGVDITDPAIVAAAELSNRY 378

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DRF+PDKAIDLIDEAA+KIKIE+DSKPE+MDKL+RRLIQ++IE EA++RE DE+S+KR
Sbjct: 379 ITDRFLPDKAIDLIDEAASKIKIEMDSKPEVMDKLDRRLIQVQIEREAVRREKDEASQKR 438

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L LI++EI +L+ + A+ ++IW+ EK   + S Q++E I+K+R +I + TRK D+  V++
Sbjct: 439 LALIEEEITRLQKEIADYDEIWQAEKAQAQGSAQLREAIDKLRFQIEEFTRKGDFNKVAE 498

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG+L  LE+ L++   ++           LL+T+VG+EEIAE+VSR TGIPV+K++Q 
Sbjct: 499 LQYGQLPALEKQLRQAQAQEAGKDGAPATRRLLRTQVGAEEIAEVVSRATGIPVAKMMQG 558

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           E++KLL +E  L +RVVGQDEAI+AV+NAIRRSRSGLSD +RP GSF+FLGPTGVGKTEL
Sbjct: 559 EKDKLLQMEARLHQRVVGQDEAIAAVANAIRRSRSGLSDPQRPSGSFLFLGPTGVGKTEL 618

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L+  +F++E+ ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++
Sbjct: 619 CKALAGFLFDSEDHMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVL 678

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDE++KA+ DVFN+LLQ+LDDGRLTD++GRT++F+NT+IVMTSN+GS  I+ M   D +
Sbjct: 679 LLDEVDKAHPDVFNVLLQVLDDGRLTDSQGRTVDFKNTVIVMTSNIGSPLIQAMVGQDPQ 738

Query: 555 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 614
            IK AV  E+K +FRPEF+NRID+ +VF  L+ ++I SIA IQL  L+++L KM++ L++
Sbjct: 739 DIKDAVWGELKNHFRPEFLNRIDETVVFHALDAQHIASIARIQLQSLQSRLAKMDLQLQV 798

Query: 615 SKAALKKISNIGFDLIYGAR 634
           S AA+ +++ +GFD ++GAR
Sbjct: 799 SDAAVAELAKVGFDPVFGAR 818


>gi|237745846|ref|ZP_04576326.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Oxalobacter
           formigenes HOxBLS]
 gi|229377197|gb|EEO27288.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Oxalobacter
           formigenes HOxBLS]
          Length = 864

 Score =  862 bits (2226), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 411/621 (66%), Positives = 532/621 (85%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP SL  K++L LD+A LLAG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNNEVPESLKGKRVLALDMAALLAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++ ++   I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKDEGQDIVFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQKI+V+EP +E+TI+ILRGLQ+KYEVHHGVEI+DPAI+AA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKIMVDEPSVEDTIAILRGLQEKYEVHHGVEISDPAIIAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+EIDSKPE+MD+L+RR+IQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L+++EI KLE +YA+ ++I K EK  ++ S+ IKEEIEK+RL+I +A R+ D+Q +S
Sbjct: 440 RLALLEEEIAKLEKEYADYDEILKAEKAGVEGSKHIKEEIEKIRLQIEEAKRRGDYQKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L YG L +LE+ L  ++ KD +L +   +  LL+T+V +EEIAE+VSR TGIPVSK++Q
Sbjct: 500 ELMYGRLPELEKALAMENDKDARLEHAHPR--LLRTEVDAEEIAEVVSRATGIPVSKMMQ 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL++E+ L KRVVGQ EAI AVS AIRRSR+GLSD  RPYGSFMFLGPTGVGKTE
Sbjct: 558 GERDKLLHMEDELHKRVVGQHEAIVAVSEAIRRSRAGLSDPNRPYGSFMFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ E+++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDTEDAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I+ M   D+
Sbjct: 678 ILLDEIEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQLIQSMGGSDQ 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
            ++K+AVM EV+ +FRPEFINR+D+I+VF  L+ KNI +IA IQL ++  +L KM+M ++
Sbjct: 738 GLVKMAVMEEVRKHFRPEFINRVDEIVVFHALDEKNIGAIARIQLELVNRRLQKMDMSME 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL KI+  GFD ++GAR
Sbjct: 798 VSDAALHKIAEAGFDPLFGAR 818


>gi|83748548|ref|ZP_00945568.1| ClpB protein [Ralstonia solanacearum UW551]
 gi|207743315|ref|YP_002259707.1| chaperone clpb protein [Ralstonia solanacearum IPO1609]
 gi|83724756|gb|EAP71914.1| ClpB protein [Ralstonia solanacearum UW551]
 gi|206594712|emb|CAQ61639.1| chaperone clpb protein [Ralstonia solanacearum IPO1609]
          Length = 862

 Score =  861 bits (2225), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/621 (65%), Positives = 522/621 (84%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+  +   I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLNDIAKEEGQTILFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 379 YITDRFLPDKAIDLIDEAAARIKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L+ +YA+LE+IWK EK   + +  +KEEI+KV+L+I +  R+     V+
Sbjct: 439 RLELIEQEIERLQKEYADLEEIWKAEKGAAQGAATVKEEIDKVKLEITRLQREGKLDKVA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK  +  +       NK  LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 499 ELQYGKLPELEGKLKAATAAEASGQKPPNK--LLRTQVGAEEIAEVVSRATGIPVSKMMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RVVGQDEA+  VS+AIRRSR+G++D  +PYGSF+FLGPTGVGKTE
Sbjct: 557 GERDKLLRMEDRLHERVVGQDEAVRLVSDAIRRSRAGIADENKPYGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LCKALAGFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS  I+ M     
Sbjct: 677 VLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQSMAGESF 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           ++IK AV  EVK +FRPEF+NRID+++VF  L++ NI SIA IQL  L  +L  M++ L+
Sbjct: 737 DVIKGAVWQEVKTHFRPEFLNRIDEVVVFHSLDQGNIESIARIQLKRLAARLAHMDLMLE 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           IS  A+ K+++ G+D ++GAR
Sbjct: 797 ISDEAVAKLASAGYDPVFGAR 817


>gi|300704290|ref|YP_003745893.1| chaperone [Ralstonia solanacearum CFBP2957]
 gi|299071954|emb|CBJ43284.1| Chaperone [Ralstonia solanacearum CFBP2957]
          Length = 862

 Score =  861 bits (2225), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 407/621 (65%), Positives = 522/621 (84%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+  +   I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLNDIAKEEGQTILFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 379 YITDRFLPDKAIDLIDEAAARIKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L+ +YA+LE+IWK EK   + +  +KEEI+KV+L+I +  R+     V+
Sbjct: 439 RLELIEQEIERLQKEYADLEEIWKAEKGAAQGAATVKEEIDKVKLEITRLQREGKLDKVA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK  +  +       NK  LL+T+VG+EEIAE+VSR TGIPV+K++Q
Sbjct: 499 ELQYGKLPELEGKLKAATAAEASGQKPPNK--LLRTQVGAEEIAEVVSRATGIPVAKMMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RVVGQDEA+  VS+AIRRSR+G+SD  +PYGSF+FLGPTGVGKTE
Sbjct: 557 GERDKLLRMEDRLHERVVGQDEAVRLVSDAIRRSRAGISDENKPYGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LCKALAGFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS  I+ M     
Sbjct: 677 VLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQSMVGESF 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           ++IK AV  EVK +FRPEF+NRID+++VF  L++ NI SIA IQL  L  +L  M++ L+
Sbjct: 737 DVIKGAVWQEVKTHFRPEFLNRIDEVVVFHSLDQGNIESIARIQLKRLAARLAHMDLTLE 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           IS  A+ K+++ G+D ++GAR
Sbjct: 797 ISDEAVAKLASAGYDPVFGAR 817


>gi|89900705|ref|YP_523176.1| ATPase [Rhodoferax ferrireducens T118]
 gi|89345442|gb|ABD69645.1| ATPase AAA-2 [Rhodoferax ferrireducens T118]
          Length = 870

 Score =  861 bits (2225), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/624 (64%), Positives = 520/624 (83%), Gaps = 3/624 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+ GEVP+SL  K++L LD+A LLAG K+RGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVAGEVPDSLKGKRVLSLDMASLLAGAKFRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 258 KNVLKDLAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKDAA ERRFQKILV EP +E+TI+ILRGLQ KYE HHGV+ITDPAIVAA+ELS+R
Sbjct: 318 RKYVEKDAALERRFQKILVGEPTVEDTIAILRGLQAKYETHHGVQITDPAIVAAAELSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIKIE+DSKPE+MDKL+RRLIQL+IE EA++RE DE+S+K
Sbjct: 378 YITDRFLPDKAIDLIDEAASKIKIELDSKPEVMDKLDRRLIQLQIEREAVRREKDEASQK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R  LI++EI +L+ + A+L++IWK EK   + S+ I EEIEKVR +I + TRK D+    
Sbjct: 438 RFGLIEEEIVRLQKEIADLDEIWKAEKAQAQGSKAIMEEIEKVRFQIEELTRKGDFNRAG 497

Query: 314 KLKYGELNKLERILKEKSQKD---IQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSK 370
           +L+YG+L  LE+ LK+   ++    +   +  +  LL+T VG+EEIAE+VSR TGIPVSK
Sbjct: 498 ELQYGKLPGLEKQLKDAQDQEAGRAKTAKDGGRAQLLRTMVGAEEIAEVVSRATGIPVSK 557

Query: 371 IVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVG 430
           ++Q ER+KLL +E  L +RVVGQDEAI+AV+NAIRRSR+GLSD  RP GSF+FLGPTGVG
Sbjct: 558 MMQGERDKLLLMEAKLHQRVVGQDEAITAVANAIRRSRAGLSDPNRPTGSFLFLGPTGVG 617

Query: 431 KTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKP 490
           KTELCK L+  +F++E+ ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKP
Sbjct: 618 KTELCKALAGFLFDSEDHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKP 677

Query: 491 YSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK 550
           YS++LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M  
Sbjct: 678 YSVLLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQMIQSMVG 737

Query: 551 GDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNM 610
            D E IK AV  E+K YFRPEF+NRID+ +VF  L+  +I  IA IQ+ +L+ +L KM +
Sbjct: 738 QDSEDIKDAVTAELKNYFRPEFLNRIDETVVFHALDASHIAKIAAIQIQVLQERLAKMEL 797

Query: 611 DLKISKAALKKISNIGFDLIYGAR 634
            L++S AAL +++ +GFD ++GAR
Sbjct: 798 TLEVSPAALAELAKVGFDPVFGAR 821


>gi|260219645|emb|CBA26490.1| Chaperone protein clpB [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 863

 Score =  861 bits (2224), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/621 (64%), Positives = 517/621 (83%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+ GEVP+SL  K++L LD+A LLAG K+RGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVEGEVPDSLKGKRVLSLDMAALLAGAKFRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 258 KNVLKDLAKDEGQTIVFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQKILV EP +E TI+ILRGL+++YEVHHGV+ITDPAIVAA+ELS+R
Sbjct: 318 RKYIEKDAALERRFQKILVGEPTVEATIAILRGLKERYEVHHGVDITDPAIVAAAELSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIKIE+DSKPE+MDKL+RRLIQL+IE EA+K+E DE+S K
Sbjct: 378 YITDRFLPDKAIDLIDEAASKIKIELDSKPEVMDKLDRRLIQLQIEREAVKKEKDEASLK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R  LI +EIN L+ + A+L++IWK EK   + S Q++EEI+K+R +I   TRK D   V+
Sbjct: 438 RFELINEEINSLQKEIADLDEIWKAEKATAQGSAQVREEIDKLRTQIESLTRKGDLAKVA 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE+ LKE   ++           LL+T+VG+EEIAE+VSR TGIPV+K++Q
Sbjct: 498 ELQYGKLPELEKRLKEAQDQEAGKAAAGGANRLLRTQVGAEEIAEVVSRATGIPVAKMMQ 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RVVGQ+EAI+AVSNAIRRSRSGLSD  RP GSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLQMEGKLRDRVVGQEEAIAAVSNAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPY++
Sbjct: 618 LCKALAGFLFDSEEHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYAV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M   D 
Sbjct: 678 LLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQLIQSMVGQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AV  E+K +FRPEF+NRID+ +VF  L+  NI SIA IQL  L  +L KM++ L 
Sbjct: 738 EDVKEAVTGELKNHFRPEFLNRIDETVVFHSLDAANIASIAKIQLATLMARLAKMDLTLA 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AA+ +++ +GFD ++GAR
Sbjct: 798 VSDAAVAELAKVGFDPVFGAR 818


>gi|347821362|ref|ZP_08874796.1| ATPase [Verminephrobacter aporrectodeae subsp. tuberculatae At4]
          Length = 869

 Score =  860 bits (2223), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/621 (64%), Positives = 519/621 (83%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+ GEVP SL  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVAGEVPESLKGKRVLSLDMAALLAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 258 KSVLNELAKDEGQTIVFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQKILV EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS R
Sbjct: 318 RKYIEKDAALERRFQKILVGEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSNR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIKIE+DSKPE MD+L+RRLIQL+IE EA++RE DESS+K
Sbjct: 378 YITDRFLPDKAIDLIDEAASKIKIEMDSKPEAMDRLDRRLIQLQIEREAVRREKDESSQK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R  LI++EI KL+ + A+ ++IW+ EK   + S Q++E I+K+R +I + TRK D+  V+
Sbjct: 438 RFALIEQEITKLQKEIADYDEIWQAEKAQAQGSAQVREAIDKLRFQIEEFTRKGDFNKVA 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE+ LK+   ++           LL+T+VG+EEIAE+VSR TGIPV+K++Q
Sbjct: 498 ELQYGKLPELEKQLKQAQAQEAGKDGVPAARRLLRTQVGAEEIAEVVSRATGIPVAKMMQ 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +E  L +RVVGQDEAI+AV+NAIRRSRSGLSD  RP GSF+FLGPTGVGKTE
Sbjct: 558 GEKDKLLQMEARLHERVVGQDEAIAAVANAIRRSRSGLSDPSRPTGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGG+LTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDGEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGHLTEAVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS  I+ M   D 
Sbjct: 678 LLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQAMVGQDP 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + IK AV  E++  FRPEF+NRID+ ++F  L+ ++I SIA IQL  L+++L KM++DL+
Sbjct: 738 DDIKEAVWGELRARFRPEFLNRIDETVLFHALDAQHIASIARIQLQGLQSRLAKMDLDLQ 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL +++ +GFD ++GAR
Sbjct: 798 VSDAALAELAKVGFDPVFGAR 818


>gi|187928299|ref|YP_001898786.1| ATP-dependent chaperone ClpB [Ralstonia pickettii 12J]
 gi|187725189|gb|ACD26354.1| ATP-dependent chaperone ClpB [Ralstonia pickettii 12J]
          Length = 862

 Score =  860 bits (2223), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/621 (65%), Positives = 523/621 (84%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP SL +K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+  +   I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLNDIAKEEGQTILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVGEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 379 YITDRFLPDKAIDLIDEAAARIKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L+ +YA+L++IWK EK   + +  +KEEI+K++L+I K  R+   + V+
Sbjct: 439 RLELIEQEIERLQKEYADLDEIWKAEKGAAQGAAALKEEIDKIKLEITKLQREGKLEKVA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK  +  +       NK  LL+T+VG+EEIAE+VSR TGIPV+K++ 
Sbjct: 499 ELQYGKLPELEGKLKAATAAESAGQKQPNK--LLRTQVGAEEIAEVVSRATGIPVAKMMT 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L +RVVGQDEA+  VS+AIRRSR+G++D  +PYGSF+FLGPTGVGKTE
Sbjct: 557 GEREKLLKMEDRLHERVVGQDEAVRLVSDAIRRSRAGIADENKPYGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LCKALAGFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS  I++M     
Sbjct: 677 VLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQQMATEPA 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           ++IK AV  EVK +FRPEF+NRID+++VF  L+++NI SIA IQL  L  +L  M++ L+
Sbjct: 737 DVIKGAVWQEVKTHFRPEFLNRIDEVVVFHALDQRNIESIARIQLKRLSARLAHMDLALE 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           IS  A+ K+++ G+D ++GAR
Sbjct: 797 ISDEAVAKLASAGYDPVFGAR 817


>gi|319792779|ref|YP_004154419.1| ATP-dependent chaperone clpb [Variovorax paradoxus EPS]
 gi|315595242|gb|ADU36308.1| ATP-dependent chaperone ClpB [Variovorax paradoxus EPS]
          Length = 873

 Score =  860 bits (2223), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/620 (65%), Positives = 520/620 (83%), Gaps = 1/620 (0%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+ GEVP+SL  K++L LD+A LLAG K+RGEFE+RLK
Sbjct: 199 NPVLIGEPGVGKTAIVEGLAQRIVAGEVPDSLKGKRVLSLDMASLLAGAKFRGEFEERLK 258

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L E++ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 259 TVLNELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYR 318

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           +YIEKDAA ERRFQKI+V EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS RY
Sbjct: 319 KYIEKDAALERRFQKIIVGEPSVEATIAILRGLQEKYEVHHGVQITDPAIVAAAELSDRY 378

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DRF+PDKAIDLIDEAAAKIKIE+DSKPE+MD+L+RRLIQL+IE EA++RE DE+S+KR
Sbjct: 379 ITDRFLPDKAIDLIDEAAAKIKIEMDSKPEVMDRLDRRLIQLQIEREAVRREKDEASQKR 438

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
             LI+ EI KL+ + A+ ++IW+ EK   + S  I+EEIEK++ +I +  RK D+  +++
Sbjct: 439 FGLIEDEIAKLQKEIADYDEIWQAEKAQAQGSAHIREEIEKLKTEIKEWERKGDFNKLAE 498

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG+L  LE+ LKE    +      ++  TLL+T+VG+EEIAE+V+R TGIPV+K++Q 
Sbjct: 499 LQYGQLPALEKRLKEAEASEAS-KGKSSAPTLLRTQVGAEEIAEVVARATGIPVAKLMQG 557

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           ER+KLL +E+ L +RVVGQDEAI AV+NAIRRSRSGLSD  RP GSF+FLGPTGVGKTEL
Sbjct: 558 ERDKLLVMEDKLHERVVGQDEAIGAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTEL 617

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L+  +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++
Sbjct: 618 CKALAGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVV 677

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M     E
Sbjct: 678 LLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSPIIQAMVGKPSE 737

Query: 555 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 614
            IK AV +E+K YFRPEF+NRID+ +VF  L+ KNI SIA IQL +LK +L KM++ L++
Sbjct: 738 EIKEAVWDELKNYFRPEFLNRIDETVVFHALDAKNIESIAAIQLKVLKARLAKMDLGLEV 797

Query: 615 SKAALKKISNIGFDLIYGAR 634
           S AAL +I+ +GFD ++GAR
Sbjct: 798 SPAALAEIAKVGFDPVFGAR 817


>gi|299067390|emb|CBJ38589.1| Chaperone [Ralstonia solanacearum CMR15]
          Length = 862

 Score =  860 bits (2222), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/621 (65%), Positives = 522/621 (84%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP SL +K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+  +   I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLNDIAKEEGQTILFIDEIHTMVGAGKAEGALDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVDEPSVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 379 YITDRFLPDKAIDLIDEAAARIKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L+ +YA+LE+IWK EK   + +  +KEEI++V+L+I +  R+     V+
Sbjct: 439 RLELIEQEIERLQKEYADLEEIWKAEKGAAQGAAAVKEEIDRVKLEIARQQREGKLDKVA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG L +LE  LK  +  +       NK  LL+T+VG+EEIAE+VSR TGIPV+K++Q
Sbjct: 499 ELQYGRLPELEGKLKAATAAEASGQKPPNK--LLRTQVGAEEIAEVVSRATGIPVAKMMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RVVGQDEA+  VS+AIRRSR+G++D  +PYGSF+FLGPTGVGKTE
Sbjct: 557 GERDKLLRMEDRLHERVVGQDEAVRLVSDAIRRSRAGIADENKPYGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LCKALAGFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS  I++M     
Sbjct: 677 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQQMASEPP 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           ++IK AV  EVK +FRPEF+NRID+++VF  L++ +I SIA IQL  L  +L  M++ L+
Sbjct: 737 DVIKGAVWQEVKTHFRPEFLNRIDEVVVFHALDQDHIESIARIQLQRLAARLAHMDLMLE 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           IS  A+ K+++ G+D ++GAR
Sbjct: 797 ISDPAVAKLASAGYDPVFGAR 817


>gi|393778254|ref|ZP_10366533.1| ATP-dependent chaperone ClpB [Ralstonia sp. PBA]
 gi|392714720|gb|EIZ02315.1| ATP-dependent chaperone ClpB [Ralstonia sp. PBA]
          Length = 861

 Score =  859 bits (2220), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/655 (62%), Positives = 539/655 (82%), Gaps = 11/655 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ ++   I+FIDE+HTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLSDVAKDEGQTIVFIDEIHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LVEEP +E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVEEPTVEATIAILRGLQERYELHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE+MD+L+RR+IQL+IE EA+K+E DE+S K
Sbjct: 379 YITDRFLPDKAIDLIDEAAARIKMEIDSKPEVMDRLDRRVIQLQIEREAVKKETDEASMK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L+ +YA+L++IW+ EK   + +  +KEEI++++L+I +  R+     V+
Sbjct: 439 RLDLIEQEIARLQKEYADLDEIWRAEKGAAQGTASLKEEIDRIKLEIVRLQREGKLDKVA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+Y +L +LE  LK  +  + Q    A +  LL+T+VG+EEIAE+VSR TGIPV+K++ 
Sbjct: 499 ELQYAKLPELEGKLKAANAAETQ---GATQNKLLRTQVGAEEIAEVVSRATGIPVAKMMT 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L +RVVGQDEA+  VS+AIRRSR+GLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 556 GEREKLLQMEDRLHQRVVGQDEAVRLVSDAIRRSRAGLSDENRPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS  I+ M     
Sbjct: 676 VLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHLIQAMTNEPY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV  EVK +FRPEF+NRID+++VF  L + +I +IA IQL  L+++L KM+M L 
Sbjct: 736 EAIKGAVWQEVKEHFRPEFLNRIDEVVVFHALGQDHITNIARIQLQRLRDRLAKMDMSLD 795

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINK 668
           IS AAL  +++ G+D ++GAR +   K+++     + H ++P +  I  G L+ K
Sbjct: 796 ISDAALTHLASAGYDPVFGARPL---KRAI-----QQHIENPLSRLILEGKLVPK 842


>gi|365093659|ref|ZP_09330720.1| ATPase [Acidovorax sp. NO-1]
 gi|363414143|gb|EHL21297.1| ATPase [Acidovorax sp. NO-1]
          Length = 868

 Score =  859 bits (2219), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/621 (64%), Positives = 521/621 (83%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+ GEVP SL +K++L LD+A LLAG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVAGEVPESLKNKRVLSLDMAALLAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 258 KSVLNELAKDEGQTIVFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQKILV EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+R
Sbjct: 318 RKYIEKDAALERRFQKILVGEPSVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIKIE+DSKPE+MD+L+RRLIQL+IE EA++RE DESS+K
Sbjct: 378 YITDRFLPDKAIDLIDEAASKIKIEMDSKPEVMDRLDRRLIQLQIEREAVRREKDESSQK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R  LI++EI KL+ + A+ ++IW+ EK   + S  ++E I+K++ +I + TRK D+  V+
Sbjct: 438 RFALIEEEITKLQKEIADYDEIWQSEKAQAQGSAHVREAIDKLKFQIEEFTRKGDFNKVA 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L  LE+ LKE   ++           LL+T+VG+EEIAE+VSR TGIPV+K++Q
Sbjct: 498 ELQYGKLPDLEKQLKEAQAQEAGKDGAPATRRLLRTQVGAEEIAEVVSRATGIPVAKMMQ 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +E  L +RVVGQ EAI+AV+NAIRRSRSGLSD  RP GSF+FLGPTGVGKTE
Sbjct: 558 GEKDKLLQMEAKLHERVVGQQEAIAAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M   D 
Sbjct: 678 LLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGQDS 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + IK AV  E+K +FRPEF+NRID+ +VF  L+ ++I SIA IQL +L+ +L KM+++L+
Sbjct: 738 DDIKEAVWGELKNHFRPEFLNRIDETVVFHALDAQHIASIAKIQLQLLQTRLAKMDLELQ 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL +++ +GFD ++GAR
Sbjct: 798 VSDAALAELAKVGFDPVFGAR 818


>gi|395003976|ref|ZP_10388065.1| ATP-dependent chaperone ClpB [Acidovorax sp. CF316]
 gi|394318076|gb|EJE54546.1| ATP-dependent chaperone ClpB [Acidovorax sp. CF316]
          Length = 869

 Score =  858 bits (2217), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/621 (65%), Positives = 521/621 (83%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+ GEVP SL  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVAGEVPESLKGKRVLSLDMAALLAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 258 KAVLNELAKDEGQTIVFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQKILV EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+R
Sbjct: 318 RKYIEKDAALERRFQKILVGEPTVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIKIE+DSKPE+MDKL+RRLIQL+IE EA++RE DESS K
Sbjct: 378 YITDRFLPDKAIDLIDEAASKIKIEMDSKPEVMDKLDRRLIQLQIEREAVRREKDESSVK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R  LI++EI +L+ + A+ ++IW+ EK   + S  ++E I+K++ +I + TRK D+  V+
Sbjct: 438 RFGLIEEEIVRLQKEIADYDEIWQSEKAQAQGSAHVREAIDKLKFQIEEFTRKGDFNKVA 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L  LER LKE   K+      A+   LL+T+VG+EEIAE+VSR TGIPV+K++Q
Sbjct: 498 ELQYGKLPDLERQLKEAQAKEDGKDGVASAPRLLRTQVGAEEIAEVVSRATGIPVAKMMQ 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +E  L +RVVGQ+EAI+AV+NAIRRSRSGLSD  RP GSF+FLGPTGVGKTE
Sbjct: 558 GEKDKLLQMEGKLHERVVGQEEAITAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M   D 
Sbjct: 678 LLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGQDA 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + IK AV  E+K +FRPEF+NRID+ +VF  L+ KNI +IA IQL +L+ +L KM++ L+
Sbjct: 738 DDIKEAVWGELKNHFRPEFLNRIDETVVFHALDAKNIEAIARIQLQLLEARLAKMDLQLQ 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           IS  AL++++ +GFD ++GAR
Sbjct: 798 ISGPALEELAKVGFDPVFGAR 818


>gi|91788074|ref|YP_549026.1| ATPase [Polaromonas sp. JS666]
 gi|91697299|gb|ABE44128.1| ATPase AAA-2 [Polaromonas sp. JS666]
          Length = 866

 Score =  857 bits (2213), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/621 (64%), Positives = 523/621 (84%), Gaps = 1/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+ GEVP+SL  K++L LD+A LLAG K+RGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVAGEVPDSLKGKRVLSLDMAALLAGAKFRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 258 KTVLNELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQKILV+EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS+R
Sbjct: 318 RKYIEKDAALERRFQKILVDEPTVEATIAILRGLQEKYEVHHGVQITDPAIVAAAELSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAAKIKIE+DSKPE+MD+L+RRLIQL+IE EA++RE DE+S+K
Sbjct: 378 YITDRFLPDKAIDLIDEAAAKIKIEMDSKPEVMDRLDRRLIQLQIEREAVRREKDEASQK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R  LI+ EI KL+ + ++L++IW+ EK     S+ + EEI+++R +I + TRK D+  V+
Sbjct: 438 RFGLIEVEIAKLQKEISDLDEIWQAEKAQALGSKDVMEEIDRIRFQIEEFTRKGDFNKVA 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE+ LK     + Q    ++   LL+T+VG+EEIAE+V+R TGIPVSK++Q
Sbjct: 498 ELQYGKLPELEKRLKAAQDTEAQ-KETSDVPKLLRTQVGAEEIAEVVARATGIPVSKLMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RVVGQDEAI AV+NAIRRSRSGLSD  RP GSF+FLGPTGVGKTE
Sbjct: 557 GERDKLLLMEGKLHERVVGQDEAIGAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IR+DMSEF+EKHS++RLIGAPPGY+GYEEGG+LTE VRRKPYS+
Sbjct: 617 LCKALAGFLFDSEDHLIRVDMSEFMEKHSVARLIGAPPGYVGYEEGGHLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDEIEKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M     
Sbjct: 677 LLLDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSPIIQSMVGQPA 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV +E+K YFRPEF+NRID+ +VF  L+ KNI SIA IQL +L  +L KM++ ++
Sbjct: 737 EDIKDAVTDELKNYFRPEFLNRIDETVVFHALDAKNIESIARIQLKVLMERLQKMDLAME 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+AA+ +++ +GFD ++GAR
Sbjct: 797 VSEAAIAELAKVGFDPVFGAR 817


>gi|407940132|ref|YP_006855773.1| ATPase [Acidovorax sp. KKS102]
 gi|407897926|gb|AFU47135.1| ATPase [Acidovorax sp. KKS102]
          Length = 868

 Score =  856 bits (2212), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/621 (64%), Positives = 523/621 (84%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+ GEVP SL +K++L LD+A LLAG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVAGEVPESLKNKRVLSLDMAALLAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 258 KSVLNELAKDEGQTIVFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQKILV EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS R
Sbjct: 318 RKYIEKDAALERRFQKILVGEPTVEATIAILRGLQEKYEVHHGVDITDPAIVAAAELSNR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+KIKIE+DSKPE+MDKL+RRLIQL+IE EA+++E DESS+K
Sbjct: 378 YITDRFLPDKAIDLIDEAASKIKIEMDSKPEVMDKLDRRLIQLQIEREAVRKEKDESSQK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R  LI++EI +L+ + A+ ++IW+ EK   + S  ++E I+K++ +I + TRK D+  V+
Sbjct: 438 RFALIEEEITRLQKEIADYDEIWQSEKAQAQGSAHVREAIDKLKFQIEEFTRKGDFNKVA 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE+ LKE   ++           LL+T+VG+EEIAE+VSR TGIPV+K++Q
Sbjct: 498 ELQYGKLPELEKQLKEAQAQEAGKDGAPAARRLLRTQVGAEEIAEVVSRATGIPVAKMMQ 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +E  L +RVVGQ+EAI+AV+NAIRRSRSGLSD  RP GSF+FLGPTGVGKTE
Sbjct: 558 GEKDKLLQMEAKLHERVVGQNEAIAAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M   D 
Sbjct: 678 LLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGQDS 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + IK AV  E+K +FRPEF+NRID+ +VF  L+ ++I SIA IQL +L+++L KM+++L+
Sbjct: 738 DDIKEAVWGELKNHFRPEFLNRIDETVVFHALDAQHIASIAKIQLQLLQSRLAKMDLELQ 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL +++ +GFD ++GAR
Sbjct: 798 VSDAALAELAKVGFDPVFGAR 818


>gi|302879019|ref|YP_003847583.1| ATP-dependent chaperone ClpB [Gallionella capsiferriformans ES-2]
 gi|302581808|gb|ADL55819.1| ATP-dependent chaperone ClpB [Gallionella capsiferriformans ES-2]
          Length = 861

 Score =  856 bits (2212), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/620 (66%), Positives = 526/620 (84%), Gaps = 2/620 (0%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +KK+L LD+A LLAG KYRGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKKVLSLDMAALLAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +LKE++ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 261 NVLKELAMDEGKTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           +YIEKDAA ERRFQK+LV+EP +E TI+ILRGL+++YE+HHGV+ITDPAI+AA+ELS RY
Sbjct: 321 KYIEKDAALERRFQKVLVDEPSVESTIAILRGLRERYELHHGVDITDPAIIAAAELSNRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DRF+PDKAIDLIDEAAA++++EIDSKPE+MDKLERRLIQLKIE EA+K+E DE+SKKR
Sbjct: 381 ITDRFLPDKAIDLIDEAAARVRMEIDSKPEVMDKLERRLIQLKIEREAVKKEKDEASKKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
             LI++EI KL  +YA+LE+IWK EK   + + Q+KEEI++VR +I +  R+   + V++
Sbjct: 441 HALIEEEIAKLSREYADLEEIWKAEKGAAQGTAQLKEEIDRVRAEIVRLQREGKLEKVAE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG+L  +E  LKE +Q++ +   + NK  LL+T+VG+EEIAE+VSR TGIPVSK++  
Sbjct: 501 LQYGQLPMMEAKLKEAAQREAEGGVSKNK--LLRTQVGAEEIAEVVSRATGIPVSKMMTG 558

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           ER+KLL +E+ L +RVVGQDEA+  VS+AIRRSRSGLSD  RPYGSF+FLGPTGVGKTEL
Sbjct: 559 ERDKLLKMEDKLHERVVGQDEAVRLVSDAIRRSRSGLSDPNRPYGSFLFLGPTGVGKTEL 618

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L+  +F++E+ +IRIDMSE++EKHS++RLIGAPPGY+GYEEGG LTE VRRKPYS+I
Sbjct: 619 CKALAGFMFDSEDHLIRIDMSEYMEKHSVARLIGAPPGYVGYEEGGGLTEAVRRKPYSVI 678

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDE+EKA+ DVFN+LLQ LDDGR+TD +GRT++F+NT+IVMTSNLGS  I++M   D +
Sbjct: 679 LLDEVEKAHPDVFNVLLQALDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMSGDDYQ 738

Query: 555 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 614
           +IKLAVM EVK YFRPEFINRID+++VF  L+ KNI SIA IQL  L+ +L  M M L +
Sbjct: 739 VIKLAVMGEVKTYFRPEFINRIDEVVVFHALDEKNIKSIAGIQLQYLEKRLAAMEMKLAV 798

Query: 615 SKAALKKISNIGFDLIYGAR 634
           S++AL +I+  GFD +YGAR
Sbjct: 799 SESALAEIATAGFDPVYGAR 818


>gi|241662872|ref|YP_002981232.1| ATP-dependent chaperone ClpB [Ralstonia pickettii 12D]
 gi|240864899|gb|ACS62560.1| ATP-dependent chaperone ClpB [Ralstonia pickettii 12D]
          Length = 862

 Score =  856 bits (2212), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/621 (64%), Positives = 523/621 (84%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP SL +K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNEEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+  +   I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLNDIAKEEGRTILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVGEPTVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 379 YITDRFLPDKAIDLIDEAAARIKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L+ +YA+L++IWK EK   + +  +KEEI+K++L+I K  R+   + V+
Sbjct: 439 RLELIEQEIERLQKEYADLDEIWKAEKGAAQGAAALKEEIDKIKLEITKLQREGKLEKVA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK  +  +       NK  LL+T+VG+EEIAE+VSR TGIPV+K++ 
Sbjct: 499 ELQYGKLPELEGKLKAATAAESAGQKQPNK--LLRTQVGAEEIAEVVSRATGIPVAKMMT 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L +RVVGQDEA+  VS+AIRRSR+G++D  +PYGSF+FLGPTGVGKTE
Sbjct: 557 GEREKLLKMEDRLHERVVGQDEAVRLVSDAIRRSRAGIADENKPYGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LCKALAGFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS  I++M     
Sbjct: 677 VLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQQMATEPA 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           ++IK AV  EVK +FRPEF+NRID+++VF  L+++NI SIA IQL  L  +L +M++ L+
Sbjct: 737 DVIKGAVWQEVKTHFRPEFLNRIDEVVVFHALDQRNIESIARIQLKRLSARLAQMDLALE 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           IS  A+ K+++ G+D ++GAR
Sbjct: 797 ISDEAVAKLASAGYDPVFGAR 817


>gi|309782202|ref|ZP_07676931.1| ATP-dependent chaperone protein ClpB [Ralstonia sp. 5_7_47FAA]
 gi|404377897|ref|ZP_10982997.1| chaperone ClpB [Ralstonia sp. 5_2_56FAA]
 gi|308918973|gb|EFP64641.1| ATP-dependent chaperone protein ClpB [Ralstonia sp. 5_7_47FAA]
 gi|348616016|gb|EGY65522.1| chaperone ClpB [Ralstonia sp. 5_2_56FAA]
          Length = 862

 Score =  856 bits (2211), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/621 (64%), Positives = 522/621 (84%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP SL +K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNEEVPESLKNKRVLVLDMAGLLAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+  +   I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLNDIAKEEGRTILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVGEPTVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 379 YITDRFLPDKAIDLIDEAAARIKMEIDSKPEAMDKLDRRLIQLKIEREAVKKETDEASQK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L+ +YA+L++IWK EK   + +  +KEEI+K++L+I K  R+   + V+
Sbjct: 439 RLELIEQEIERLQKEYADLDEIWKAEKGAAQGAAALKEEIDKIKLEITKLQREGKLEKVA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK  +  +       NK  LL+T+VG+EEIAE+VSR TGIPV+K++ 
Sbjct: 499 ELQYGKLPELEGKLKAATAAESAGQKQPNK--LLRTQVGAEEIAEVVSRATGIPVAKMMT 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L +RVVGQDEA+  VS+AIRRSR+G++D  +PYGSF+FLGPTGVGKTE
Sbjct: 557 GEREKLLKMEDRLHERVVGQDEAVRLVSDAIRRSRAGIADENKPYGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LCKALAGFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS  I++M     
Sbjct: 677 VLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQLIQQMATEPA 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           ++IK AV  EVK +FRPEF+NRID+++VF  L+++NI SIA IQL  L  +L  M++ L+
Sbjct: 737 DVIKGAVWQEVKTHFRPEFLNRIDEVVVFHALDQRNIESIARIQLKRLSARLAHMDLALE 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           IS  A+ K+++ G+D ++GAR
Sbjct: 797 ISDEAVAKLASAGYDPVFGAR 817


>gi|239814845|ref|YP_002943755.1| ATP-dependent chaperone ClpB [Variovorax paradoxus S110]
 gi|239801422|gb|ACS18489.1| ATP-dependent chaperone ClpB [Variovorax paradoxus S110]
          Length = 873

 Score =  855 bits (2209), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/621 (64%), Positives = 522/621 (84%), Gaps = 1/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+ GEVP SL  K++L LD+A LLAG K+RGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVAGEVPESLKGKRVLSLDMAALLAGAKFRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 258 KTVLNELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQKI+V EP +E TI+ILRGLQ+KYEVHHGV+ITDPAIVAA+ELS R
Sbjct: 318 RKYIEKDAALERRFQKIIVGEPSVEATIAILRGLQEKYEVHHGVQITDPAIVAAAELSDR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAAKIKIE+DSKPE+MD+L+RRLIQL+IE EA++RE DE+S+K
Sbjct: 378 YITDRFLPDKAIDLIDEAAAKIKIEMDSKPEVMDRLDRRLIQLQIEREAVRREKDEASQK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R  LI+ EI +L+ + A+ ++IW+ EK   + S +I+E+I+K++ +I +  RK D+  ++
Sbjct: 438 RFGLIEDEIARLQKEIADYDEIWQAEKAQAQGSAKIREDIDKIKFEIEEWKRKGDFNKLA 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L  LE+ L+E  + +      ++  TLL+T+VGSEEIAE+V+R TGIPV+K++Q
Sbjct: 498 ELQYGQLPALEKRLREAEESEAS-KGKSSAPTLLRTQVGSEEIAEVVARATGIPVAKLMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RVVGQDEAI AV+NAIRRSRSGLSD  RP GSF+FLGPTGVGKTE
Sbjct: 557 GERDKLLVMEDKLHERVVGQDEAIGAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LCKALAGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M     
Sbjct: 677 VLLDEVEKAHHDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSPIIQSMVGQPA 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV +E+K YFRPEF+NRID+ +VF  L+ KNI SIA IQL +L+ +L KM++ L+
Sbjct: 737 EEIKEAVWDELKNYFRPEFLNRIDETVVFHALDAKNIESIAAIQLKVLQARLAKMDLGLE 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL +I+ +GFD ++GAR
Sbjct: 797 VSPAALAEIAKVGFDPVFGAR 817


>gi|296135529|ref|YP_003642771.1| ATP-dependent chaperone ClpB [Thiomonas intermedia K12]
 gi|295795651|gb|ADG30441.1| ATP-dependent chaperone ClpB [Thiomonas intermedia K12]
          Length = 861

 Score =  853 bits (2205), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/621 (66%), Positives = 520/621 (83%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP+SL  K++L+LDIALLLAG K+RGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPDSLRGKRLLVLDIALLLAGAKFRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S +    I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 258 KNVLKELSQDAGQTIVFIDEIHTMVGAGKGEGAMDAGNMLKPALARGELHCIGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK++V+EP +E+TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+R
Sbjct: 318 RKYIEKDAALERRFQKVMVDEPSVEDTIAILRGLQEKYEVHHGVEITDPAIVAAAELSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAAKIKIEIDSKPE MDKL+RR IQLKIE EA+KRE DE+S+K
Sbjct: 378 YITDRFLPDKAIDLIDEAAAKIKIEIDSKPEAMDKLDRRRIQLKIEREAVKREKDEASQK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++E+ KL+ +YA+L++IWK EK  ++ S  IKEEI+K+R +I +  RK D+  V+
Sbjct: 438 RLALIEEELAKLDREYADLDEIWKAEKAAVQGSAAIKEEIDKIRFEIEELKRKGDFNKVA 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG L +LER L E   K+    +      LL+T+VG+EEIAE+VSR TGIPVSK+VQ
Sbjct: 498 ELQYGRLPELERKLHEAQAKETADGDQPQARRLLRTQVGAEEIAEVVSRATGIPVSKLVQ 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KL+++E  L +RVVGQDEAI AVS+AIRRSR+GLSD +RPYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLVHMEERLHRRVVGQDEAIRAVSDAIRRSRAGLSDPRRPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ +E I+R+DMSEF+EKHS++RLIGAPPGY+GY+EGGYLTE VRRKPYS+
Sbjct: 618 LTKGLAEFLFDTDEHIVRLDMSEFMEKHSVARLIGAPPGYVGYDEGGYLTEAVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L DE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I  M    +
Sbjct: 678 VLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHQIMAMSGQPQ 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + I+ AV  EVK +FRPEF+NRID+++VF  L  K I  IA IQL  L+ +L +++M L 
Sbjct: 738 QAIRDAVWEEVKAHFRPEFLNRIDEVVVFHALGEKEIADIARIQLRGLEGRLAQLDMRLD 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL +I+  GFD ++GAR
Sbjct: 798 VSSEALAEIAREGFDPVFGAR 818


>gi|410693234|ref|YP_003623855.1| Chaperone clpB (Heat-shock protein F84.1) [Thiomonas sp. 3As]
 gi|294339658|emb|CAZ88018.1| Chaperone clpB (Heat-shock protein F84.1) [Thiomonas sp. 3As]
          Length = 861

 Score =  853 bits (2204), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/621 (66%), Positives = 520/621 (83%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP+SL  K++L+LDIALLLAG K+RGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPDSLRGKRLLVLDIALLLAGAKFRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S +    I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 258 KNVLKELSQDAGQTIVFIDEIHTMVGAGKGEGAMDAGNMLKPALARGELHCIGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK++V+EP +E+TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS+R
Sbjct: 318 RKYIEKDAALERRFQKVMVDEPSVEDTIAILRGLQEKYEVHHGVEITDPAIVAAAELSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAAKIKIEIDSKPE MDKL+RR IQLKIE EA+KRE DE+S+K
Sbjct: 378 YITDRFLPDKAIDLIDEAAAKIKIEIDSKPEAMDKLDRRRIQLKIEREAVKREKDEASQK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++E+ KL+ +YA+L++IWK EK  ++ S  IKEEI+K+R +I +  RK D+  V+
Sbjct: 438 RLALIEEELAKLDREYADLDEIWKAEKAAVQGSAAIKEEIDKIRFEIEELKRKGDFNKVA 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG L +LER L E   K+    +      LL+T+VG+EEIAE+VSR TGIPVSK+VQ
Sbjct: 498 ELQYGRLPELERKLHEAQAKETADGDQPQARRLLRTQVGAEEIAEVVSRATGIPVSKLVQ 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KL+++E  L +RVVGQDEAI AVS+AIRRSR+GLSD +RPYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLVHMEERLHRRVVGQDEAIRAVSDAIRRSRAGLSDPRRPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ +E I+R+DMSEF+EKHS++RLIGAPPGY+GY+EGGYLTE VRRKPYS+
Sbjct: 618 LTKGLAEFLFDTDEHIVRLDMSEFMEKHSVARLIGAPPGYVGYDEGGYLTEAVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L DE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I  M    +
Sbjct: 678 VLFDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHQIMAMSGQPQ 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + I+ AV  EVK +FRPEF+NRID+++VF  L  K I  IA IQL  L+ +L +++M L 
Sbjct: 738 QAIRDAVWEEVKAHFRPEFLNRIDEVVVFHALGEKEIADIARIQLRGLEGRLAQLDMRLD 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL +I+  GFD ++GAR
Sbjct: 798 VSSEALAEIAREGFDPVFGAR 818


>gi|224825048|ref|ZP_03698154.1| ATP-dependent chaperone ClpB [Pseudogulbenkiania ferrooxidans 2002]
 gi|224602719|gb|EEG08896.1| ATP-dependent chaperone ClpB [Pseudogulbenkiania ferrooxidans 2002]
          Length = 858

 Score =  852 bits (2201), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/623 (65%), Positives = 527/623 (84%), Gaps = 7/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL  KK+L+LD+A LLAG KYRG+FE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKHKKLLVLDLAALLAGAKYRGDFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ ++ + +IFIDE+HT++G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLSDLAKDEGNTLIFIDEIHTLVGAGKAEGAMDAGNMLKPALARGELHCLGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E+TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEDTIAILRGLQEKYEIHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMELDSKPEEMDKLDRRLIQLKIEREAVKKESDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI+ EI++L  +YA+LE+IWK EK   + SQ IKEEI+++++++    R+ DWQ ++
Sbjct: 440 RLGLIEDEIDRLSREYADLEEIWKAEKATAQGSQSIKEEIDRLKVEMEDLKRQGDWQKLA 499

Query: 314 KLKYGELNKLERILK--EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +L+YG+L +LE  LK  E +    Q PN      LL+T+VG+EEIAE+VSR TGIPVSK+
Sbjct: 500 ELQYGKLPQLEARLKEAEAAGAGTQKPNR-----LLRTQVGAEEIAEVVSRMTGIPVSKM 554

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           +  EREKLL +E +L +R+VGQDEA+ AVS+AIRRSRSGLSD  RPYGSF+FLGPTGVGK
Sbjct: 555 LAGEREKLLRMEEVLHERLVGQDEAVRAVSDAIRRSRSGLSDPNRPYGSFLFLGPTGVGK 614

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCKTL+  +F++E+ +IRIDMSE++EKHS++RLIGAPPGY+GYEEGG LTE VRRKPY
Sbjct: 615 TELCKTLAGFLFDSEDHLIRIDMSEYMEKHSVARLIGAPPGYVGYEEGGQLTEQVRRKPY 674

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           S+ILLDE+EKA+ +VFNILLQ+LDDGRLTD +GRT++F+NT++VMTSN+GS  I+ M   
Sbjct: 675 SVILLDEVEKAHPEVFNILLQVLDDGRLTDGQGRTVDFKNTVVVMTSNIGSQHIQAMGSD 734

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D ++IKLAVM EVK YFRPEFINRID+++VF  L    I SIA IQL  L+ +L K+ + 
Sbjct: 735 DYQVIKLAVMAEVKGYFRPEFINRIDEVVVFHALGSAQIRSIARIQLKSLERRLAKLELS 794

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L+++ AAL  I+  GFD +YGAR
Sbjct: 795 LQVTDAALDAIAEAGFDPVYGAR 817


>gi|347539270|ref|YP_004846695.1| ATP-dependent chaperone ClpB [Pseudogulbenkiania sp. NH8B]
 gi|345642448|dbj|BAK76281.1| ATP-dependent chaperone ClpB [Pseudogulbenkiania sp. NH8B]
          Length = 858

 Score =  851 bits (2199), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 408/623 (65%), Positives = 527/623 (84%), Gaps = 7/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL  KK+L+LD+A LLAG KYRG+FE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKHKKLLVLDLAALLAGAKYRGDFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ ++ + +IFIDE+HT++G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLSDLAKDEGNTLIFIDEIHTLVGAGKAEGAMDAGNMLKPALARGELHCLGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E+TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEDTIAILRGLQEKYEIHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMELDSKPEEMDKLDRRLIQLKIEREAVKKESDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI+ EI++L  +YA+LE+IWK EK   + SQ IKEEI+++++++    R+ DWQ ++
Sbjct: 440 RLGLIEDEIDRLSREYADLEEIWKAEKATAQGSQSIKEEIDRLKVEMEDLKRQGDWQKLA 499

Query: 314 KLKYGELNKLERILK--EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +L+YG+L +LE  LK  E +    Q PN      LL+T+VG+EEIAE+VSR TGIPVSK+
Sbjct: 500 ELQYGKLPQLEARLKEAEAAGAGTQKPNR-----LLRTQVGAEEIAEVVSRMTGIPVSKM 554

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           +  EREKLL +E ++ +R+VGQDEA+ AVS+AIRRSRSGLSD  RPYGSF+FLGPTGVGK
Sbjct: 555 LAGEREKLLKMEEVMHERLVGQDEAVRAVSDAIRRSRSGLSDPNRPYGSFLFLGPTGVGK 614

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCKTL+  +F++E+ +IRIDMSE++EKHS++RLIGAPPGY+GYEEGG LTE VRRKPY
Sbjct: 615 TELCKTLAGFLFDSEDHLIRIDMSEYMEKHSVARLIGAPPGYVGYEEGGQLTEQVRRKPY 674

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           S+ILLDE+EKA+ +VFNILLQ+LDDGRLTD +GRT++F+NT++VMTSN+GS  I+ M   
Sbjct: 675 SVILLDEVEKAHPEVFNILLQVLDDGRLTDGQGRTVDFKNTVVVMTSNIGSQHIQAMGSD 734

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D ++IKLAVM EVK YFRPEFINRID+++VF  L    I SIA IQL  L+ +L K+ + 
Sbjct: 735 DYQVIKLAVMAEVKGYFRPEFINRIDEVVVFHALGSAQIRSIARIQLKSLERRLAKLELS 794

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L+++ AAL  I+  GFD +YGAR
Sbjct: 795 LQVTDAALDAIAEAGFDPVYGAR 817


>gi|221068631|ref|ZP_03544736.1| ATP-dependent chaperone ClpB [Comamonas testosteroni KF-1]
 gi|220713654|gb|EED69022.1| ATP-dependent chaperone ClpB [Comamonas testosteroni KF-1]
          Length = 870

 Score =  851 bits (2198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/621 (65%), Positives = 533/621 (85%), Gaps = 3/621 (0%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+ GEVP SL +K++L LD+A LLAG KYRG+FE+RLK
Sbjct: 202 NPVLIGEPGVGKTAIVEGLAQRIVAGEVPESLQNKRVLSLDMAGLLAGAKYRGDFEERLK 261

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +LKEI+ ++  II+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 262 SVLKEIAQDEGRIILFIDEIHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR 321

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           +YIEKDAA ERRFQK++V+EP +E+TI+ILRGLQ KYE HH V+ITDPAIVAA+ELS+RY
Sbjct: 322 KYIEKDAALERRFQKVIVDEPSVEDTIAILRGLQVKYEAHHNVDITDPAIVAAAELSHRY 381

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DRF+PDKAIDLIDEAAAKIKIE+DSKPE+MDKLERR+IQLKIE EA+KRE DE+S+KR
Sbjct: 382 ITDRFLPDKAIDLIDEAAAKIKIEMDSKPEVMDKLERRMIQLKIEREAMKREKDEASQKR 441

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L LI++E+  LE +YA+LE+IWK EK     S+QI++E++++R++I +  RK D+  V++
Sbjct: 442 LQLIEEELESLEREYADLEEIWKAEKASALGSEQIRKEVDQLRIQIEEFKRKGDFNKVAE 501

Query: 315 LKYGELNKLERILKE-KSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           L+YG+L  LE+ L E +++++ Q    ANK  LL+T+VG+EEIAE+VSR TGIPV+K++Q
Sbjct: 502 LQYGKLPALEKQLHEAQAKEEGQDGATANK--LLRTQVGAEEIAEVVSRATGIPVAKMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL++E+ L +RVVGQ+EAISAV+NAIRRSRSGLSD  RP GSF+FLGPTGVGKTE
Sbjct: 560 GEKDKLLHMEDKLHERVVGQEEAISAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALAGFLFDSEDHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M   D 
Sbjct: 680 LLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGEDA 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K AV  E+K +FRPEF+NRID+ +VF  L+ KNI +IA IQL +L+++L KM + ++
Sbjct: 740 DDVKEAVWGELKNHFRPEFLNRIDETVVFHALDAKNIEAIARIQLKLLESRLQKMELSMQ 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ AL +++ +GFD ++GAR
Sbjct: 800 VSEQALAELAKVGFDPVFGAR 820


>gi|264677176|ref|YP_003277082.1| ATPase AAA [Comamonas testosteroni CNB-2]
 gi|262207688|gb|ACY31786.1| ATPase AAA-2 [Comamonas testosteroni CNB-2]
          Length = 877

 Score =  851 bits (2198), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/621 (65%), Positives = 533/621 (85%), Gaps = 3/621 (0%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+ GEVP SL +K++L LD+A LLAG KYRG+FE+RLK
Sbjct: 209 NPVLIGEPGVGKTAIVEGLAQRIVAGEVPESLQNKRVLSLDMAGLLAGAKYRGDFEERLK 268

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +LKEI+ ++  II+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 269 SVLKEIAQDEGRIILFIDEIHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR 328

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           +YIEKDAA ERRFQK++V+EP +E+TI+ILRGLQ KYE HH V+ITDPAIVAA+ELS+RY
Sbjct: 329 KYIEKDAALERRFQKVIVDEPSVEDTIAILRGLQVKYEAHHNVDITDPAIVAAAELSHRY 388

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DRF+PDKAIDLIDEAAAKIKIE+DSKPE+MDKLERR+IQLKIE EA+KRE DE+S+KR
Sbjct: 389 ITDRFLPDKAIDLIDEAAAKIKIEMDSKPEVMDKLERRMIQLKIEREAMKREKDEASQKR 448

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L LI++E+  LE +YA+LE+IWK EK     S+QI++E++++R++I +  RK D+  V++
Sbjct: 449 LQLIEEELESLEREYADLEEIWKAEKASALGSEQIRKEVDQLRIQIEEFKRKGDFNKVAE 508

Query: 315 LKYGELNKLERILKE-KSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           L+YG+L  LE+ L E +++++ Q    ANK  LL+T+VG+EEIAE+VSR TGIPV+K++Q
Sbjct: 509 LQYGKLPALEKQLHEAQAKEEGQDGATANK--LLRTQVGAEEIAEVVSRATGIPVAKMMQ 566

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL++E+ L +RVVGQ+EAISAV+NAIRRSRSGLSD  RP GSF+FLGPTGVGKTE
Sbjct: 567 GEKDKLLHMEDKLHERVVGQEEAISAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTE 626

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 627 LCKALAGFLFDSEDHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 686

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M   D 
Sbjct: 687 LLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGEDA 746

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K AV  E+K +FRPEF+NRID+ +VF  L+ KNI +IA IQL +L+++L KM + ++
Sbjct: 747 DDVKEAVWGELKNHFRPEFLNRIDETVVFHALDAKNIEAIARIQLKLLESRLQKMELSMQ 806

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ AL +++ +GFD ++GAR
Sbjct: 807 VSEQALAELAKVGFDPVFGAR 827


>gi|456063699|ref|YP_007502669.1| ATPase [beta proteobacterium CB]
 gi|455440996|gb|AGG33934.1| ATPase [beta proteobacterium CB]
          Length = 864

 Score =  850 bits (2197), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/622 (64%), Positives = 521/622 (83%), Gaps = 1/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP +L +K++L+LD+ALLLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPETLKNKRVLVLDMALLLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ ++   IIFIDE+HTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLSDVAKDEGQTIIFIDEIHTMVGAGKGDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKD A ERRFQK++VEEP +E TI+ILRGLQ++YE+HHG+EITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDPALERRFQKVMVEEPSVEATIAILRGLQERYELHHGIEITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEA ++I++EIDSKPE+MDKLERRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAGSRIRMEIDSKPEVMDKLERRLIQLKIEREAVKKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI+ EI +L  +YA+LE+IWK EK  +  +  +KEEIEKVR  I K  R+   + V+
Sbjct: 440 RLSLIEDEIKRLGAEYADLEEIWKAEKGAVLGAAHLKEEIEKVRADIAKLQREGKLEQVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNA-NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIV 372
           +L+YG+L +LE  LK  +  + +   +   K  LL+T+VG+EEIAE+VSR TGIPVSK++
Sbjct: 500 ELQYGKLPELEAKLKSAAAAEAKGDKDGVVKNKLLRTQVGAEEIAEVVSRATGIPVSKMM 559

Query: 373 QVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKT 432
           Q ER+KLL +E LL KRVVGQ+EAI AVS+AIRRSR+GL++  RPYGSF+FLGPTGVGKT
Sbjct: 560 QGERDKLLKMEELLHKRVVGQEEAIRAVSDAIRRSRAGLAEENRPYGSFLFLGPTGVGKT 619

Query: 433 ELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYS 492
           ELCK L+  +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR PYS
Sbjct: 620 ELCKALAGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRHPYS 679

Query: 493 LILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGD 552
           +IL DEIEKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M    
Sbjct: 680 VILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQSMTDKK 739

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
           +  IK AV  E+K +FRPEF+NRID+I+VF  L++ NI +IA I L  L ++L K++M +
Sbjct: 740 QSEIKDAVFEELKNHFRPEFLNRIDEIVVFHGLDKGNIANIAKILLKNLSDRLAKVDMQM 799

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S AAL KI+ +GFD ++GAR
Sbjct: 800 EVSDAALSKIAEVGFDPVFGAR 821


>gi|299530720|ref|ZP_07044135.1| ATPase AAA-2 [Comamonas testosteroni S44]
 gi|418530573|ref|ZP_13096496.1| ATPase AAA [Comamonas testosteroni ATCC 11996]
 gi|298721236|gb|EFI62178.1| ATPase AAA-2 [Comamonas testosteroni S44]
 gi|371452292|gb|EHN65321.1| ATPase AAA [Comamonas testosteroni ATCC 11996]
          Length = 870

 Score =  850 bits (2197), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/621 (65%), Positives = 532/621 (85%), Gaps = 3/621 (0%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+ GEVP SL +K++L LD+A LLAG KYRG+FE+RLK
Sbjct: 202 NPVLIGEPGVGKTAIVEGLAQRIVAGEVPESLQNKRVLSLDMAGLLAGAKYRGDFEERLK 261

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +LKEI+ ++  II+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 262 SVLKEIAQDEGRIILFIDEIHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR 321

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           +YIEKDAA ERRFQK++V+EP +E+TI+ILRGLQ KYE HH V+ITDPAIVAA+ELS+RY
Sbjct: 322 KYIEKDAALERRFQKVIVDEPSVEDTIAILRGLQVKYEAHHNVDITDPAIVAAAELSHRY 381

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DRF+PDKAIDLIDEAAAKIKIE+DSKPE+MDKLERR+IQLKIE EA+KRE DE+S+KR
Sbjct: 382 ITDRFLPDKAIDLIDEAAAKIKIEMDSKPEVMDKLERRMIQLKIEREAMKREKDEASQKR 441

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L LI++E+  LE +YA+LE+IWK EK     S+QI++E++++R++I +  RK D+  V++
Sbjct: 442 LQLIEEELESLEREYADLEEIWKAEKASALGSEQIRKEVDQLRIQIEEFKRKGDFNKVAE 501

Query: 315 LKYGELNKLERILKE-KSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           L+YG+L  LE+ L E +++++ Q    ANK  LL+T+VG+EEIAE+VSR TGIPV+K++Q
Sbjct: 502 LQYGKLPALEKQLHEAQAKEEGQDGATANK--LLRTQVGAEEIAEVVSRATGIPVAKMMQ 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL++E  L +RVVGQ+EAISAV+NAIRRSRSGLSD  RP GSF+FLGPTGVGKTE
Sbjct: 560 GEKDKLLHMEGKLHERVVGQEEAISAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKALAGFLFDSEDHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M   D 
Sbjct: 680 LLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMVGEDA 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K AV  E+K +FRPEF+NRID+ +VF  L+ KNI +IA IQL +L+++L KM + ++
Sbjct: 740 DDVKEAVWGELKNHFRPEFLNRIDETVVFHALDAKNIEAIARIQLKLLESRLQKMELSMQ 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ AL +++ +GFD ++GAR
Sbjct: 800 VSEQALAELAKVGFDPVFGAR 820


>gi|114330749|ref|YP_746971.1| ATPase [Nitrosomonas eutropha C91]
 gi|114307763|gb|ABI59006.1| ATPase AAA-2 domain protein [Nitrosomonas eutropha C91]
          Length = 863

 Score =  850 bits (2195), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 415/620 (66%), Positives = 523/620 (84%), Gaps = 1/620 (0%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLSLDMAALLAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +LKE++ ++   I+FIDELHTM+G GK EG+IDAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 261 TVLKELAQDEGRTIVFIDELHTMVGAGKAEGAIDAGNMLKPALARGELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           +Y+EKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYE+HHGVEITDPAIVAA+ELS+RY
Sbjct: 321 KYVEKDAALERRFQKVLVDEPGVEATIAILRGLQEKYELHHGVEITDPAIVAAAELSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DRF+PDKAIDLIDEAAA+I++E DSKPE+MDKL+RRLIQLKIE EA+K+E DE+SKKR
Sbjct: 381 ITDRFLPDKAIDLIDEAAARIRMEQDSKPEVMDKLDRRLIQLKIEREAVKKEKDEASKKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L L+++EI KLE +YA+L++I K EK+  K SQ+IKEE+EK+R +   A RK D Q  S+
Sbjct: 441 LALLEEEIEKLEREYADLDEILKAEKSRAKGSQEIKEELEKLRREEEAARRKGDLQKASE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L YG + +LE  L E+   D +    A +  L +T+VG+EEIAE+VSR TGIPVSK++Q 
Sbjct: 501 LLYGRIPQLETQLAEQLHHD-ESAEEATQPKLFRTQVGAEEIAEVVSRATGIPVSKMMQG 559

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           EREKLL +E+ L +RV+GQDEA+  VS+AIRRSRSGLSD  RPYGSF+FLGPTGVGKTEL
Sbjct: 560 EREKLLFMEDKLHERVIGQDEAVRLVSDAIRRSRSGLSDPNRPYGSFLFLGPTGVGKTEL 619

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L+  +F++EE +IR+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RRKPYS+I
Sbjct: 620 CKALAGFLFDSEEHLIRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEQIRRKPYSVI 679

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDE+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS  I++M   D +
Sbjct: 680 LLDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSQMIQQMSGDDYQ 739

Query: 555 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 614
            IK AVM EVK YFRPEFINRID+++VF  L+  +I SIA IQL+ L  +L +M M L +
Sbjct: 740 AIKQAVMGEVKTYFRPEFINRIDEVVVFHSLDEAHIKSIAKIQLSNLGARLAQMEMKLVV 799

Query: 615 SKAALKKISNIGFDLIYGAR 634
           S++AL K++  GFD I+GAR
Sbjct: 800 SESALAKLAEAGFDPIFGAR 819


>gi|226939364|ref|YP_002794437.1| ClpB [Laribacter hongkongensis HLHK9]
 gi|226714290|gb|ACO73428.1| ClpB [Laribacter hongkongensis HLHK9]
          Length = 857

 Score =  848 bits (2191), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/621 (65%), Positives = 529/621 (85%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A LLAG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRLLVLDLAALLAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S ++   +IFIDE+HT++G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KSVLDELSKDEGQTLIFIDEIHTLVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK++V EP +E+TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVMVNEPSVEDTIAILRGLQEKYEIHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+EIDSKPE MDKL+RR+IQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMEIDSKPESMDKLDRRIIQLKIEREAVKKETDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI KL  +YA+L++IWK EK  +  SQ IK+E++KVR +I  A R+ D+   S
Sbjct: 440 RLALIEEEIGKLSKEYADLDEIWKAEKAQVVGSQSIKDELDKVRSQIEDAKRRGDFGKAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK     +     +  +  LL+T+VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 ELQYGKLPELESRLKAAEAGE----GSKGQNRLLRTEVGAEEIAEVVSRATGIPVSKMLE 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E++L +RVVGQDEA+  V++AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 556 GEREKLLHMEDVLHQRVVGQDEAVRVVADAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E+ +IRIDMSE++EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKTLAGFMFDSEDHLIRIDMSEYMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT++VMTSN+GS +I+ M     
Sbjct: 676 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVVVMTSNVGSQQIQSMAGDHY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           ++IKLAVMNEVK YFRPEFINRID+++VF  L++ NI +IA IQL  L+ +L K+ + L+
Sbjct: 736 DLIKLAVMNEVKGYFRPEFINRIDEVVVFHGLDQANIRAIARIQLKRLEARLDKLELSLQ 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++  AL K++  GFD +YGAR
Sbjct: 796 VTDDALDKLAEAGFDPVYGAR 816


>gi|301630819|ref|XP_002944514.1| PREDICTED: chaperone protein clpB-like, partial [Xenopus (Silurana)
           tropicalis]
          Length = 739

 Score =  848 bits (2190), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/621 (65%), Positives = 529/621 (85%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+ GEVP SL +K++L LD+A LLAG KYRGEFE+RL
Sbjct: 65  NNPVLIGEPGVGKTAIVEGLAQRIVAGEVPESLKNKRVLALDMAALLAGAKYRGEFEERL 124

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 125 KTVLNELAKDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 184

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQKILV+EP +E TI+ILRGL++KYE+HHGVEITDPAIVAA+ELS+R
Sbjct: 185 RKYIEKDAALERRFQKILVDEPSVEATIAILRGLREKYELHHGVEITDPAIVAAAELSHR 244

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y++DRF+PDKAIDLIDEAAAKIKIEIDSKPE +DKL+RRLIQL+IE EA+KRE DE+S+K
Sbjct: 245 YVTDRFLPDKAIDLIDEAAAKIKIEIDSKPEAIDKLDRRLIQLQIEREAVKREKDEASQK 304

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI KL+ + A+LE IWK EK   + SQQ++E+IEKV+L+I +  R+ D+  V+
Sbjct: 305 RLQLIEEEITKLQREIADLEDIWKSEKAQAQGSQQVREQIEKVKLQIEELKRQGDFNKVA 364

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE+ LKE   ++       +   LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 365 ELQYGQLPELEKRLKEAQAQEEGQGGTVHAHRLLRTQVGAEEIAEVVSRATGIPVSKMMQ 424

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL++E+ L +RV+GQDEAISAV++AIRRSR+GLSD +RP GSF+FLGPTGVGKTE
Sbjct: 425 GEKDKLLHMEDKLHERVIGQDEAISAVAHAIRRSRAGLSDPQRPTGSFLFLGPTGVGKTE 484

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPY++
Sbjct: 485 LCKALAGFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYAV 544

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M   D 
Sbjct: 545 LLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQAMLGQDS 604

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + IK AV  E+K +FRPEF+NRID+ +VF  L+ ++I +IA IQL +L+ +L ++ + L 
Sbjct: 605 DDIKEAVWGELKQHFRPEFLNRIDETVVFHGLDARHIAAIARIQLQLLQTRLARVELTLD 664

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           IS AAL++++ +GFD ++GAR
Sbjct: 665 ISDAALEELAKVGFDPVFGAR 685


>gi|145588634|ref|YP_001155231.1| ATPase [Polynucleobacter necessarius subsp. asymbioticus
           QLW-P1DMWA-1]
 gi|145047040|gb|ABP33667.1| ATPase AAA-2 domain protein [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 867

 Score =  847 bits (2189), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/622 (64%), Positives = 520/622 (83%), Gaps = 1/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L+LD+ALLLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLVLDMALLLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ ++   IIFIDE+HTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLSDVAKDEGQTIIFIDEIHTMVGAGKGDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKD A ERRFQK++VEEP +E TI+ILRGLQ++YE+HHG+EITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDPALERRFQKVMVEEPSVEATIAILRGLQERYELHHGIEITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEA ++I++EIDSKPE+MDKLERRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAGSRIRMEIDSKPEVMDKLERRLIQLKIEREAVKKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI+ EI +L  +YA+LE+IWK EK  +  +  +KEEIEK+R  I K  R+   + V+
Sbjct: 440 RLGLIEDEIKRLGAEYADLEEIWKAEKGAVLGAANLKEEIEKIRADIVKLQREGKLEQVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNA-NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIV 372
           +L+Y +L +LE  LK  +  + +   N   K  LL+T+VG+EEIAE+VSR TGIPVSK++
Sbjct: 500 ELQYSKLPELEAKLKSAAAAEAKGDKNGVVKNKLLRTQVGAEEIAEVVSRATGIPVSKMM 559

Query: 373 QVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKT 432
           Q ER+KLL +E LL KRVVGQ+EAI AVS+AIRRSR+GL++  RPYGSF+FLGPTGVGKT
Sbjct: 560 QGERDKLLKMEELLHKRVVGQEEAIRAVSDAIRRSRAGLAEENRPYGSFLFLGPTGVGKT 619

Query: 433 ELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYS 492
           ELCK L+  +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR PYS
Sbjct: 620 ELCKALAGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRHPYS 679

Query: 493 LILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGD 552
           +IL DEIEKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M    
Sbjct: 680 VILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQSMVDKK 739

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
           +  IK AV  E+K +FRPEF+NRID+I+VF  L++ NI +IA I L  L ++L K++M L
Sbjct: 740 QAEIKEAVFEELKNHFRPEFLNRIDEIVVFHGLDKGNIANIAKILLKNLSDRLAKVDMQL 799

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S AAL KI+ +GFD ++GAR
Sbjct: 800 EVSDAALSKIAEVGFDPVFGAR 821


>gi|238022814|ref|ZP_04603240.1| hypothetical protein GCWU000324_02727 [Kingella oralis ATCC 51147]
 gi|237866017|gb|EEP67153.1| hypothetical protein GCWU000324_02727 [Kingella oralis ATCC 51147]
          Length = 858

 Score =  847 bits (2189), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/622 (64%), Positives = 516/622 (82%), Gaps = 5/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL  K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRGKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVNEPSVEDTIAILRGLQERYEIHHGVDITDPAIVAAAELSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+EIDSKPE MDKL+RR+IQLK+E   +++E DE+SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMEIDSKPEQMDKLDRRIIQLKMERMHVEKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI  LE +YA+L++IWK EK        +K +I+ ++ +I +A R  D+   S
Sbjct: 440 RLTLIDEEIAGLEKEYADLDEIWKAEKASSVSMSDLKTQIDNLKTRIEQAKRAGDYGLAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGEL KL   LK+  +      +N    TL +T+VG+EEIAEIVSR TGIPVSK+++
Sbjct: 500 ELEYGELPKLTLQLKDAERSGSLKKHN----TLFRTEVGAEEIAEIVSRMTGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E++L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 556 GEREKLLKMEDVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKHSI+RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALAGFLFDSEDHLIRIDMSEYMEKHSIARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M +  D
Sbjct: 676 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQAIQAMGDTSD 735

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K AVM +VK YFRPE INRID+++VF  LN  NI SIA IQL+ LK +L + N+ L
Sbjct: 736 YDAVKAAVMEDVKAYFRPELINRIDEVVVFHGLNAANIRSIAQIQLDSLKKRLAEQNLRL 795

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S+AAL  ++  GFD +YGAR
Sbjct: 796 EVSEAALDVLAQAGFDPVYGAR 817


>gi|121605125|ref|YP_982454.1| ATPase [Polaromonas naphthalenivorans CJ2]
 gi|120594094|gb|ABM37533.1| ATPase AAA-2 domain protein [Polaromonas naphthalenivorans CJ2]
          Length = 867

 Score =  845 bits (2184), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/621 (64%), Positives = 520/621 (83%), Gaps = 1/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+ GEVP+SL  K++L LD+A L+AG K+RGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVAGEVPDSLKGKRVLSLDMAALVAGAKFRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 258 KTVLNELAKEEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQKILV EP +E TI+ILRGLQ+KYE HHGV+ITDPAIVAA+ELS+R
Sbjct: 318 RKYIEKDAALERRFQKILVGEPTVEATIAILRGLQEKYETHHGVQITDPAIVAAAELSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAAK+KIEIDSKPE+MD+L+RRLIQL+IE EA++RE DE+S+K
Sbjct: 378 YITDRFLPDKAIDLIDEAAAKVKIEIDSKPEVMDRLDRRLIQLQIEREAVRREKDEASQK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R  LI++EI KL+ + +++++IW+ EK     S+ + EEI+ +  +I + TRK D+  V+
Sbjct: 438 RFGLIEEEIGKLQKEISDMDEIWQAEKAQALGSKDVMEEIDTINTQIEEFTRKGDFNKVA 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +L++ LK+ +Q   +     +K  LL+T+VG+EEIAE+VSR TGIPV+K++Q
Sbjct: 498 ELQYGKLPELKKRLKQ-AQDTEESKGVDDKPRLLRTQVGAEEIAEVVSRATGIPVAKMMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +E  L +RVVGQDEAI AV+NAIRRSRSGLSD  RP GSF+FLGPTGVGKTE
Sbjct: 557 GEKDKLLQMEGKLHERVVGQDEAIGAVANAIRRSRSGLSDPNRPTGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LCKALAGFLFDSEDHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M     
Sbjct: 677 LLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSPIIQSMVGQPY 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AV +E+K YFRPEF+NRID+ +VF  L+ KNI SIA IQL +L  +L KM++ L 
Sbjct: 737 EEIKDAVTDELKNYFRPEFLNRIDETVVFHALDAKNIESIARIQLKVLLARLAKMDLVLD 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+AA+ +++ +GFD ++GAR
Sbjct: 797 VSEAAIGELAKVGFDPVFGAR 817


>gi|171463224|ref|YP_001797337.1| ATP-dependent chaperone ClpB [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171192762|gb|ACB43723.1| ATP-dependent chaperone ClpB [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 867

 Score =  844 bits (2181), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/622 (64%), Positives = 521/622 (83%), Gaps = 1/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGE GVGKTAIVEGLAQRI+NGEVP +L +K++L+LD+ALLLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGESGVGKTAIVEGLAQRIVNGEVPETLKNKRVLVLDMALLLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ ++   IIFIDE+HTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLSDVAKDEGQTIIFIDEIHTMVGAGKGDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKD A ERRFQK+++EEP +E TI+ILRGLQ++YE+HHG+EITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDPALERRFQKVMIEEPSVEATIAILRGLQERYELHHGIEITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEA ++I++EIDSKPE+MDKLERRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAGSRIRMEIDSKPEVMDKLERRLIQLKIEREAVKKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L  +YA+LE+IWK EK  +  +  +KEEIEKV+ +I+K  R    + V+
Sbjct: 440 RLGLIEEEIKRLGAEYADLEEIWKAEKGAVLGAANLKEEIEKVKAEISKLQRDGKLEQVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNA-NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIV 372
           +L+YG+L +LE  LK  +  + +   +   K  LL+T+VG EEIAE+VSR TGIPVSK++
Sbjct: 500 ELQYGKLPELEAKLKSAAAAEAKGDKDGVVKNKLLRTQVGVEEIAEVVSRATGIPVSKMM 559

Query: 373 QVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKT 432
           Q ER+KLL +E LL KRVVGQ+EAI AVS+AIRRSR+GL++  RPYGSF+FLGPTGVGKT
Sbjct: 560 QGERDKLLKMEELLHKRVVGQEEAIRAVSDAIRRSRAGLAEENRPYGSFLFLGPTGVGKT 619

Query: 433 ELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYS 492
           +LCK L+  +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR PYS
Sbjct: 620 KLCKALAGFLFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRHPYS 679

Query: 493 LILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGD 552
           +IL DEIEKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M    
Sbjct: 680 VILFDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHLIQSMADKK 739

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
           +  IK AV  E+K +FRPEF+NRID+I+VF  L++ NI +IA I L  L ++L K++M L
Sbjct: 740 QSEIKEAVFEELKNHFRPEFLNRIDEIVVFHGLDKGNIANIAKILLKNLSDRLAKVDMQL 799

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S AAL KI+ +GFD ++GAR
Sbjct: 800 EVSDAALNKIAEVGFDPVFGAR 821


>gi|74316833|ref|YP_314573.1| ClpB protein [Thiobacillus denitrificans ATCC 25259]
 gi|74056328|gb|AAZ96768.1| ClpB protein [Thiobacillus denitrificans ATCC 25259]
          Length = 859

 Score =  843 bits (2178), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/621 (65%), Positives = 519/621 (83%), Gaps = 5/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP +L  KK+L+LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPETLKGKKVLVLDLAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++ +    I+F+DE+HT++G GK EG+IDAGNMLKP L+RGELH IGATTL+EY
Sbjct: 260 KAVLKELAMDPGRYIVFLDEIHTLVGAGKAEGAIDAGNMLKPALARGELHLIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK++V+EP +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS+R
Sbjct: 320 RKYIEKDAALERRFQKVMVDEPSVESTIAILRGLQERYELHHGVDITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE+MDKL+RR+IQLKIE EA+K+E DE+SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAAARIKMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L++ EI+KL  +YA+LE++WK EK  ++ S  +KEEI+K+R ++    R+     V+
Sbjct: 440 RLGLLEDEIDKLGREYADLEEVWKSEKAQVQGSAHLKEEIDKLRGEMADLQRQGKLDKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG+L +LE  LK       +       F LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 500 EIQYGKLPQLEAQLKHA-----EASGEKPVFKLLRTEVGAEEIAEVVSRATGIPVSKMMQ 554

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KL+++E+ L  RVVGQDEA++ VS+AIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 555 GERDKLMHMEDHLHGRVVGQDEAVAVVSDAIRRSRAGLSDPNRPLGSFLFLGPTGVGKTE 614

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++ E ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 615 LCKTLAEYLFDSAEHMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 674

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           IL+DEIEKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I++M   D 
Sbjct: 675 ILMDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQMIQQMSGDDY 734

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           +++KLAV+ EVK YFRPEFINRID+++VF  L+  NI SIA IQL  L+ +L  M M L 
Sbjct: 735 QVVKLAVLGEVKSYFRPEFINRIDEVVVFHALSESNIASIARIQLKALEARLAAMEMKLD 794

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++ AAL +I+  GFD +YGAR
Sbjct: 795 VTDAALAEIAKAGFDPVYGAR 815


>gi|333375879|ref|ZP_08467677.1| chaperone protein ClpB [Kingella kingae ATCC 23330]
 gi|332969337|gb|EGK08362.1| chaperone protein ClpB [Kingella kingae ATCC 23330]
          Length = 858

 Score =  842 bits (2176), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/623 (64%), Positives = 521/623 (83%), Gaps = 7/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL  K++L+LD+A L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRGKRLLVLDLAALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLNDLAKDDGNSLIFIDEIHTLVGAGKSDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEATIAILRGLQERYEIHHGVDITDPAIVAAAELSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQL++E   + +E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLQMEKMHVAKETDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI  L+ +YA+L++IWK EK     S  +K++IE  RLKI +A R  D+   S
Sbjct: 440 RLELIDEEIGSLQKEYADLDEIWKAEKASSVSSNDVKKQIEDTRLKIEQAKRAGDFAKAS 499

Query: 314 KLKYGELNKL-ERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIV 372
           +L+YG L KL +++   +S   ++    ANK  L +T+VG+EE+AEIVSR TGIPVSK++
Sbjct: 500 ELEYGVLPKLTQQLHAAESSGSLK---QANK--LFRTQVGAEEVAEIVSRMTGIPVSKMM 554

Query: 373 QVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKT 432
           + EREKLL +E +L KRVVGQDEA+ AV++AIRRSRSGL+D  +PYGSF+FLGPTGVGKT
Sbjct: 555 EGEREKLLKMEEVLHKRVVGQDEAVRAVADAIRRSRSGLADPNKPYGSFLFLGPTGVGKT 614

Query: 433 ELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYS 492
           ELCKTL+  +F++EE +IR+DMSE++EKHSI+RLIGAPPGY+GYEEGGYLTE VRRKPYS
Sbjct: 615 ELCKTLANFLFDSEEHLIRVDMSEYMEKHSIARLIGAPPGYVGYEEGGYLTEQVRRKPYS 674

Query: 493 LILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKG 551
           +ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT++VMTSN+GS  I+EM +  
Sbjct: 675 VILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVVVMTSNIGSQNIQEMGDTS 734

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D   +K AVM++VK YFRPE INRID+++VF  L++ NI +IA IQL  L+N+L   N+ 
Sbjct: 735 DYAAVKEAVMDDVKAYFRPELINRIDEVVVFHGLSQANIRNIAKIQLIGLRNRLAAQNLR 794

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L++S+AAL  I++ GFD +YGAR
Sbjct: 795 LEVSEAALDLIADAGFDPVYGAR 817


>gi|332284688|ref|YP_004416599.1| ATP-dependent protease, ATPase subunit [Pusillimonas sp. T7-7]
 gi|330428641|gb|AEC19975.1| ATP-dependent protease, ATPase subunit [Pusillimonas sp. T7-7]
          Length = 864

 Score =  841 bits (2173), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 404/662 (61%), Positives = 530/662 (80%), Gaps = 16/662 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP +L  K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNNEVPETLKGKRVLSLDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S +    I+FIDELHTM+G GK EG++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KAVLKELSQDDGRTIVFIDELHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+L+ EPD+E TI+ILRGLQ++YE+HHGV ITDPAIVAA+ELS R
Sbjct: 320 RKYIEKDAALERRFQKVLINEPDVESTIAILRGLQERYELHHGVAITDPAIVAAAELSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+I++EIDSKPE+MDKL+RR+IQLKIE EA+ ++ DE S++
Sbjct: 380 YITDRFLPDKAIDLIDEAAARIRMEIDSKPEVMDKLDRRIIQLKIEREAVNKDTDEGSQR 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  I+ E+ KL+ +Y + E++WK EK  ++ SQ IKEEIE+VR  + +  RK  +  ++
Sbjct: 440 RLKAIEDELVKLQREYNDYEEVWKSEKAAVQGSQAIKEEIERVRADMAELQRKGQFDKLA 499

Query: 314 KLKYGELNKLERILK--EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +L+YG+L +LE  L+  E SQ   Q   +  +  LL+T+VG+EEIAE+VSR TGIPV+K+
Sbjct: 500 ELQYGKLPELESRLQSAEASQ---QQEVDDERPRLLRTQVGAEEIAEVVSRATGIPVAKM 556

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           +Q ER+KLL +E+ L +RVVGQ+EA+S V++AIRRSR+GLSD  RPYGSF+FLGPTGVGK
Sbjct: 557 MQGERDKLLKMEDFLHQRVVGQNEAVSLVADAIRRSRAGLSDPSRPYGSFLFLGPTGVGK 616

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TEL K L+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPY
Sbjct: 617 TELTKALANFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPY 676

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           S++LLDEIEKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGS  I+ M   
Sbjct: 677 SVVLLDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSQHIQSMAGQ 736

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E++K  + +E+K  FRPEF+NRID+++VF  L  K+I SIA IQ+  L  ++ +  M 
Sbjct: 737 PYEVVKEVIWDELKQSFRPEFLNRIDEVVVFHGLEAKHIESIARIQIQRLAQRMAQKEMR 796

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           L++S AAL +++  GFD ++GAR +   K+++     + H ++P A  I  G     GP+
Sbjct: 797 LEVSDAALAQLARTGFDPVFGARPL---KRAI-----QQHIENPIARLILEGKF---GPK 845

Query: 672 SL 673
            +
Sbjct: 846 DV 847


>gi|261364438|ref|ZP_05977321.1| ATP-dependent chaperone protein ClpB [Neisseria mucosa ATCC 25996]
 gi|288567348|gb|EFC88908.1| ATP-dependent chaperone protein ClpB [Neisseria mucosa ATCC 25996]
          Length = 857

 Score =  841 bits (2172), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/621 (62%), Positives = 516/621 (83%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E   + +E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ L+ +YA+L++IWK EK     +  IK++++ +++KI +A R+ D+   S
Sbjct: 440 RLELIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGEL KL   L+         P+   +  L +T+VG++E+AEIVSR TGIPVSK+++
Sbjct: 500 ELEYGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 676 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AVM EVK YFRPE INRID+++VF  LN++NI +IA IQL  L+ +L   ++ LK
Sbjct: 736 EAVKEAVMEEVKAYFRPEMINRIDEVVVFHGLNQENIRNIAKIQLKGLEKRLEAQHLHLK 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +  AAL  I+  GFD +YGAR
Sbjct: 796 VDDAALDLIAKAGFDPVYGAR 816


>gi|340362813|ref|ZP_08685179.1| chaperone protein ClpB [Neisseria macacae ATCC 33926]
 gi|339886971|gb|EGQ76574.1| chaperone protein ClpB [Neisseria macacae ATCC 33926]
          Length = 857

 Score =  841 bits (2172), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/621 (62%), Positives = 516/621 (83%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E   + +E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVSKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ L+ +YA+L++IWK EK     +  IK++++ +++KI +A R+ D+   S
Sbjct: 440 RLELIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGEL KL   L+         P+   +  L +T+VG++E+AEIVSR TGIPVSK+++
Sbjct: 500 ELEYGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 676 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AVM EVK YFRPE INRID+++VF  LN++NI +IA IQL  L+ +L   ++ LK
Sbjct: 736 EAVKEAVMEEVKAYFRPEMINRIDEVVVFHGLNQENIRNIAKIQLKGLEKRLEAQHLHLK 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +  AAL  I+  GFD +YGAR
Sbjct: 796 VDDAALDLIAKAGFDPVYGAR 816


>gi|294669705|ref|ZP_06734772.1| hypothetical protein NEIELOOT_01606 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291308618|gb|EFE49861.1| hypothetical protein NEIELOOT_01606 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 857

 Score =  841 bits (2172), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/621 (62%), Positives = 516/621 (83%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E   + +E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ L+ +YA+L++IWK EK     +  IK++++ +++KI +A R+ D+   S
Sbjct: 440 RLELIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGEL KL   L+         P+   +  L +T+VG++E+AEIVSR TGIPVSK+++
Sbjct: 500 ELEYGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 676 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AVM EVK YFRPE INRID+++VF  LN++NI +IA IQL  L+ +L   ++ LK
Sbjct: 736 EAVKEAVMEEVKAYFRPEMINRIDEVVVFHGLNQENIRNIAKIQLKGLEKRLEAQHLHLK 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +  AAL  I+  GFD +YGAR
Sbjct: 796 VDDAALDLIAEAGFDPVYGAR 816


>gi|349611011|ref|ZP_08890327.1| chaperone ClpB [Neisseria sp. GT4A_CT1]
 gi|419797400|ref|ZP_14322885.1| ATP-dependent chaperone protein ClpB [Neisseria sicca VK64]
 gi|348615041|gb|EGY64573.1| chaperone ClpB [Neisseria sp. GT4A_CT1]
 gi|385698231|gb|EIG28607.1| ATP-dependent chaperone protein ClpB [Neisseria sicca VK64]
          Length = 857

 Score =  841 bits (2172), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/621 (62%), Positives = 516/621 (83%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E   + +E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ L+ +YA+L++IWK EK     +  IK++++ +++KI +A R+ D+   S
Sbjct: 440 RLELIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGEL KL   L+         P+   +  L +T+VG++E+AEIVSR TGIPVSK+++
Sbjct: 500 ELEYGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 676 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AVM EVK YFRPE INRID+++VF  LN++NI +IA IQL  L+ +L   ++ LK
Sbjct: 736 EAVKEAVMEEVKAYFRPEMINRIDEVVVFHGLNQENIRNIAKIQLKGLEKRLEAQHLHLK 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +  AAL  I+  GFD +YGAR
Sbjct: 796 VDDAALDLIAKAGFDPVYGAR 816


>gi|387128271|ref|YP_006296876.1| clpB protein [Methylophaga sp. JAM1]
 gi|386275333|gb|AFI85231.1| ClpB protein [Methylophaga sp. JAM1]
          Length = 861

 Score =  841 bits (2172), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/622 (63%), Positives = 514/622 (82%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  + +K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGMKNKRVLALDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  II+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLSDLSKQEGQIILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQY+EKDAA ERRFQK+LV EP +E TI+ILRGL ++YEVHHGV+ITDPAIVAA+ LS+R
Sbjct: 320 RQYVEKDAALERRFQKVLVGEPSVESTIAILRGLSERYEVHHGVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLKIE  A+++E DE+SKK
Sbjct: 380 YITDRNLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKIERVALQKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ E+ KL  +Y +LE++WK EK  +  SQ IKEE+EK RL++  A R  + + +S
Sbjct: 440 RLDTLETEMKKLAREYTDLEEVWKSEKAALHGSQHIKEELEKARLELESANRSGNLEKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L   +Q ++Q       FTLL+ +VG EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGRIPALEKQLDIATQAEMQ------DFTLLRNRVGEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL ++  L +RV+GQDEA+++V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLKMDEALHERVIGQDEAVNSVANAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+ EE+++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKSLATFLFDTEEAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS+ I+EM   DK
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSNVIQEMAGEDK 733

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K AVM  V  +FRPEFINR+DD++VF  L +  I +IA+IQL+ L+ +L +  M L
Sbjct: 734 YDTMKNAVMEIVGQHFRPEFINRVDDVVVFHPLQKSQIHAIADIQLSHLRQRLAEKEMGL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S AAL  +S  GFD +YGAR
Sbjct: 794 ELSDAALDMLSEAGFDPVYGAR 815


>gi|381401592|ref|ZP_09926490.1| ClpB protein [Kingella kingae PYKK081]
 gi|380833446|gb|EIC13316.1| ClpB protein [Kingella kingae PYKK081]
          Length = 858

 Score =  840 bits (2171), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/623 (64%), Positives = 520/623 (83%), Gaps = 7/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL  K++L+LD+A L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRGKRLLVLDLAALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLNDLAKDDGNSLIFIDEIHTLVGAGKSDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEATIAILRGLQERYEIHHGVDITDPAIVAAAELSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+ IK+E+DSKPE MDKL+RR+IQL++E   + +E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASHIKMELDSKPEQMDKLDRRIIQLQMEKMHVAKETDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI  L+ +YA+L++IWK EK     S  +K++IE  RLKI +A R  D+   S
Sbjct: 440 RLELIDEEIGNLQKEYADLDEIWKAEKASSVSSNDVKKQIEDTRLKIEQAKRAGDFAKAS 499

Query: 314 KLKYGELNKL-ERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIV 372
           +L+YG L KL +++   +S   ++    ANK  L +T+VG+EE+AEIVSR TGIPVSK++
Sbjct: 500 ELEYGVLPKLTQQLHAAESSGSLK---QANK--LFRTQVGAEEVAEIVSRMTGIPVSKMM 554

Query: 373 QVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKT 432
           + EREKLL +E +L KRVVGQDEA+ AV++AIRRSRSGL+D  +PYGSF+FLGPTGVGKT
Sbjct: 555 EGEREKLLKMEEVLHKRVVGQDEAVRAVADAIRRSRSGLADPNKPYGSFLFLGPTGVGKT 614

Query: 433 ELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYS 492
           ELCKTL+  +F++EE +IR+DMSE++EKHSI+RLIGAPPGY+GYEEGGYLTE VRRKPYS
Sbjct: 615 ELCKTLANFLFDSEEHLIRVDMSEYMEKHSIARLIGAPPGYVGYEEGGYLTEQVRRKPYS 674

Query: 493 LILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKG 551
           +ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT++VMTSN+GS  I+EM +  
Sbjct: 675 VILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVVVMTSNIGSQNIQEMGDTS 734

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D   +K AVM++VK YFRPE INRID+++VF  L++ NI +IA IQL  L+N+L   N+ 
Sbjct: 735 DYAAVKEAVMDDVKAYFRPELINRIDEVVVFHGLSQANIRNIAKIQLIGLRNRLAAQNLR 794

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L++S+AAL  I++ GFD +YGAR
Sbjct: 795 LEVSEAALDLIADAGFDPVYGAR 817


>gi|254468710|ref|ZP_05082116.1| ATP-dependent chaperone ClpB [beta proteobacterium KB13]
 gi|207087520|gb|EDZ64803.1| ATP-dependent chaperone ClpB [beta proteobacterium KB13]
          Length = 863

 Score =  840 bits (2169), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/621 (64%), Positives = 528/621 (85%), Gaps = 5/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI+EGLAQRI+N EVP+SL +K++L LD+A LLAG KYRG+FE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIIEGLAQRIVNQEVPDSLKNKQVLSLDMASLLAGAKYRGDFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKEI+ +Q +II+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KAVLKEINASQGNIILFIDEIHTMVGAGKTEGAMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R Y+EKDAA ERRFQK++++EP++E TI+ILRGLQ+KYE+HH VEITDPAIVAA+ELS R
Sbjct: 320 RMYVEKDAALERRFQKVMIDEPNVEATIAILRGLQEKYELHHNVEITDPAIVAAAELSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IKIEIDSKPE +DKLERRL+QLKIE EA+K++ D +SK+
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKIEIDSKPEQLDKLERRLVQLKIEREAVKKDKDAASKE 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R  +I+ EI K+E ++A+LE+IWK EK  +  ++ IKE++E +++ + +  RK +WQ VS
Sbjct: 440 RFEIIESEIKKIEKEFADLEEIWKSEKATLIGAKGIKEKLESLKISMEEEKRKGNWQRVS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGE+ +LE  LK   + D+  P + NK  +L+T+VG++EIAE+VSR TGIPV+K++Q
Sbjct: 500 ELQYGEIPQLEEQLK---KADVTKPASQNK--MLRTEVGADEIAEVVSRATGIPVAKMMQ 554

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKL+N+E++L +RVVGQDEA+ ++SNAIRRSRSGLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 555 GEKEKLINMESVLHQRVVGQDEAVKSISNAIRRSRSGLSDEGRPYGSFLFLGPTGVGKTE 614

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K+L++ +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 615 LSKSLASFLFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 674

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFN+LLQ+LD+GRLTD +G+T++F+NT+I+MTSNLGS+ I++M + D 
Sbjct: 675 ILLDEIEKAHPDVFNVLLQVLDEGRLTDGKGKTVDFKNTVIIMTSNLGSNLIQKMTQDDY 734

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           ++IK++VM EVK YF+PEFINRIDD++VF  L  +++  I   QL  L  KL K+ +  K
Sbjct: 735 QVIKISVMAEVKNYFKPEFINRIDDVVVFHGLGERHLHDITKNQLENLLLKLKKIGIQAK 794

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++  A+ +I   GFD IYGAR
Sbjct: 795 VTDRAIFEIGKAGFDPIYGAR 815


>gi|349575394|ref|ZP_08887312.1| chaperone protein ClpB [Neisseria shayeganii 871]
 gi|348013042|gb|EGY51968.1| chaperone protein ClpB [Neisseria shayeganii 871]
          Length = 861

 Score =  839 bits (2168), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/621 (62%), Positives = 515/621 (82%), Gaps = 5/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI++GEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 205 NNPVLIGEPGVGKTAIVEGLAQRIVDGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 264

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 265 KAVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 324

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 325 RQYIEKDAALERRFQKVLVSEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSNR 384

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQL++E   +++E DE+SKK
Sbjct: 385 YITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLRMEKMHVEKESDEASKK 444

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RLLLI +EI  L+ +YA+L++IWK EK     S  IK+ I+++++KI +  R+ + +  +
Sbjct: 445 RLLLIDEEIAALQKEYADLDEIWKAEKAATSGSADIKKRIDEIKIKIEQFKRQGNLEAAA 504

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG+L ++E  LK            A    L +TKVG++E+AEIVSR TGIPVSK+++
Sbjct: 505 RMQYGDLPQMEAQLKAAENS-----GGAQSNRLFRTKVGADEVAEIVSRMTGIPVSKMME 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E++L +RVVGQDEA+ AV++AIRRSRSGLSD  +PYGSF+FLGPTGVGKTE
Sbjct: 560 GEREKLLKMEDVLHRRVVGQDEAVRAVADAIRRSRSGLSDPNKPYGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++EE +IRIDMSE++EKHSI+RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 620 LCKTLAGFLFDSEEHLIRIDMSEYMEKHSIARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 680 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTADY 739

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K  VM +VK +FRPE INRID+++VF  L++++I SIA IQL  L  +L    + L+
Sbjct: 740 DALKAVVMEDVKQHFRPELINRIDEVVVFHGLDQQHIRSIAKIQLQGLTRRLAAQELHLE 799

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  ++  GFD IYGAR
Sbjct: 800 VSDAALDVLAQAGFDPIYGAR 820


>gi|298368650|ref|ZP_06979968.1| ATP-dependent chaperone protein ClpB [Neisseria sp. oral taxon 014
           str. F0314]
 gi|298282653|gb|EFI24140.1| ATP-dependent chaperone protein ClpB [Neisseria sp. oral taxon 014
           str. F0314]
          Length = 857

 Score =  839 bits (2167), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/621 (62%), Positives = 516/621 (83%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E   + +E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ L+ +YA+L++IWK EK     +  IK++++ +++KI +A R+ D+   S
Sbjct: 440 RLELIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGEL KL   L+         P+   +  L +T+VG++E+AEIVSR TGIPVSK+++
Sbjct: 500 ELEYGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 676 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K AVM EVK YFRPE INRID+++VF  LN++NI +IA IQL  L+ +L   ++ LK
Sbjct: 736 DAVKEAVMEEVKAYFRPEMINRIDEVVVFHGLNQENIRNIAKIQLKGLEKRLEAQHLHLK 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +  AAL  I+  GFD +YGAR
Sbjct: 796 VDDAALDLIAKAGFDPVYGAR 816


>gi|225023847|ref|ZP_03713039.1| hypothetical protein EIKCOROL_00713 [Eikenella corrodens ATCC
           23834]
 gi|224943321|gb|EEG24530.1| hypothetical protein EIKCOROL_00713 [Eikenella corrodens ATCC
           23834]
          Length = 857

 Score =  839 bits (2167), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/622 (63%), Positives = 519/622 (83%), Gaps = 6/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E   + +E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ L+ +YA+L++IWK EK     +  IK++++ +++KI +A R+ D+   S
Sbjct: 440 RLELIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARAS 499

Query: 314 KLKYGELNKLERILK-EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIV 372
           +L+YGEL KL   L+  +S  D +  N      L +T+VG++E+AEIVSR TGIPVSK++
Sbjct: 500 ELEYGELPKLGAQLQAAESNADGKKQNK-----LFRTEVGADEVAEIVSRMTGIPVSKMM 554

Query: 373 QVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKT 432
           + ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKT
Sbjct: 555 EGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKT 614

Query: 433 ELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYS 492
           ELCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS
Sbjct: 615 ELCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYS 674

Query: 493 LILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGD 552
           +ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D
Sbjct: 675 VILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQD 734

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E +K AVM+EVK YFRPE INRID+++VF  L+++NI SIA IQL  L+ +L   ++ L
Sbjct: 735 YEAVKKAVMDEVKAYFRPEMINRIDEVVVFHGLDQENIRSIAKIQLKGLEKRLEAQHLHL 794

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           K+  AAL  I+  GFD +YGAR
Sbjct: 795 KVDDAALDLIAEAGFDPVYGAR 816


>gi|329119993|ref|ZP_08248665.1| chaperone protein ClpB [Neisseria bacilliformis ATCC BAA-1200]
 gi|327463906|gb|EGF10220.1| chaperone protein ClpB [Neisseria bacilliformis ATCC BAA-1200]
          Length = 857

 Score =  838 bits (2165), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/621 (62%), Positives = 515/621 (82%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E   + +E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ L+ +YA+L++IWK EK     +  IK++++ +++KI +A R+ D+   S
Sbjct: 440 RLELIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGEL KL + L+         P       L +T+VG++E+AEIVSR TGIPV+K+++
Sbjct: 500 ELEYGELPKLGQQLQAAESN----PEGKKANKLFRTEVGADEVAEIVSRMTGIPVAKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 676 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AVM EVK YFRPE INRID+++VF  LN++NI +IA IQL  L+ +L   ++ LK
Sbjct: 736 EAVKEAVMEEVKAYFRPEMINRIDEVVVFHGLNQENIRNIAKIQLKGLEKRLEAQHLHLK 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +  AAL  I+  GFD +YGAR
Sbjct: 796 VDDAALDLIAKAGFDPVYGAR 816


>gi|350570807|ref|ZP_08939153.1| chaperone protein ClpB [Neisseria wadsworthii 9715]
 gi|349794755|gb|EGZ48565.1| chaperone protein ClpB [Neisseria wadsworthii 9715]
          Length = 857

 Score =  838 bits (2164), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 406/666 (60%), Positives = 534/666 (80%), Gaps = 27/666 (4%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI++GEVP+SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVDGEVPDSLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMERMHVEKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI  L+ +YA+L++IWK EK     +  IK++I+ +++KI +A R+ D+   S
Sbjct: 440 RLDLIDEEIAGLQKEYADLDEIWKAEKAASAGTADIKKQIDDIKVKIEQAKRQGDFARAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNN-----ANKFTLLKTKVGSEEIAEIVSRTTGIPV 368
           +L+YGEL KL       SQ+   L NN     ANK  L +TKVG++E+AEIVSR TGIPV
Sbjct: 500 ELEYGELPKL-------SQQLQALENNPQEQQANK--LFRTKVGADEVAEIVSRMTGIPV 550

Query: 369 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 428
           SK+++ ER+KLL +E +L  RVVGQDEA+ AVSNAIRRSRSGL+D  +PYGSF+FLGPTG
Sbjct: 551 SKMMEGERDKLLKMEEVLHNRVVGQDEAVRAVSNAIRRSRSGLADPNKPYGSFLFLGPTG 610

Query: 429 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 488
           VGKTELCK L++ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRR
Sbjct: 611 VGKTELCKALASFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRR 670

Query: 489 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 548
           KPYS+ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M
Sbjct: 671 KPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHHIQQM 730

Query: 549 EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKM 608
              D E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L   
Sbjct: 731 GTSDYEAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLAAQ 790

Query: 609 NMDLKISKAALKKISNIGFDLIYGARDVHGCKK-------SLSILLKK------IHKKSP 655
           N+ LK+  AAL  I+  GFD +YGAR +    +       +L++L  K      IH K+ 
Sbjct: 791 NLHLKVDDAALDIIAKAGFDPVYGARPLKRAIQAEIENPLALALLEGKYQPESVIHVKAD 850

Query: 656 EANFIF 661
             N IF
Sbjct: 851 GDNLIF 856


>gi|220933996|ref|YP_002512895.1| ATP-dependent chaperone ClpB [Thioalkalivibrio sulfidophilus
           HL-EbGr7]
 gi|219995306|gb|ACL71908.1| ATP-dependent chaperone ClpB [Thioalkalivibrio sulfidophilus
           HL-EbGr7]
          Length = 859

 Score =  838 bits (2164), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/623 (63%), Positives = 516/623 (82%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L ++++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNRRLLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  II+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLNDLSKQEGRIILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPAIVAA+ LS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPAIVAAAMLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE MD+LERRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEEMDRLERRLIQLKIEREALKKESDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI+KLE ++A+L++IWK EK  +  +  IKEE+E+ RL++  A R  D   +S
Sbjct: 440 RLDTLEGEIDKLEREFADLDEIWKAEKAALSGTAHIKEELERARLELETARRAGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++      ++  LL+ KV  EEIAE+VSR TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDMAAQAEM------HEMRLLRNKVSDEEIAEVVSRWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RVVGQ EA+ AVSNAIRRSR+GLSD +RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEEALTTRVVGQSEAVKAVSNAIRRSRAGLSDPRRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+A +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LTKALAAFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I+EM  G++
Sbjct: 674 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQIIQEM-AGEE 732

Query: 554 --EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E +K AVM  V  +FRPEFINR+D+++VF  L R+ I SI +IQL+ L+ ++ + ++ 
Sbjct: 733 HYEAMKAAVMEVVGSHFRPEFINRVDEVVVFHPLGREQIRSITSIQLDDLRKRMAERDLK 792

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L++S+AAL ++   GFD +YGAR
Sbjct: 793 LEVSEAALDRLGEAGFDPVYGAR 815


>gi|261377553|ref|ZP_05982126.1| ATP-dependent chaperone protein ClpB [Neisseria cinerea ATCC 14685]
 gi|269146293|gb|EEZ72711.1| ATP-dependent chaperone protein ClpB [Neisseria cinerea ATCC 14685]
          Length = 857

 Score =  837 bits (2163), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/621 (63%), Positives = 515/621 (82%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E   + +E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKETDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ L+ +YA+L++IWK EK     +  IK++I+ +++KI +A R+ D+   S
Sbjct: 440 RLELIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQIDDIKVKIEQAKRQGDFARAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGEL KL   L+         P+   +  L +T+VG++E+AEIVSR TGIPVSK+++
Sbjct: 500 ELEYGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 676 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 736 EAVKEIVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLT 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 796 VSDAALDIIAKAGFDPIYGAR 816


>gi|345875625|ref|ZP_08827416.1| ATP-dependent chaperone protein ClpB [Neisseria weaveri LMG 5135]
 gi|417958313|ref|ZP_12601228.1| ATP-dependent chaperone protein ClpB [Neisseria weaveri ATCC 51223]
 gi|343966971|gb|EGV35222.1| ATP-dependent chaperone protein ClpB [Neisseria weaveri ATCC 51223]
 gi|343968700|gb|EGV36924.1| ATP-dependent chaperone protein ClpB [Neisseria weaveri LMG 5135]
          Length = 857

 Score =  837 bits (2161), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/626 (63%), Positives = 519/626 (82%), Gaps = 14/626 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI++GEVP+SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVDGEVPDSLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLNDLAKDDGNTLIFIDEIHTLVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMERMHVEKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI  L+ +YA+L++IWK EK     +  IK++I+ +++KI +A R+ D+   S
Sbjct: 440 RLDLIDEEIAGLQKEYADLDEIWKAEKAASAGTADIKKQIDDIKVKIEQAKRQGDFARAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNN-----ANKFTLLKTKVGSEEIAEIVSRTTGIPV 368
           +L+YGEL KL       SQ+   L NN     ANK  L +TKVG++E+AEIVSR TGIPV
Sbjct: 500 ELEYGELPKL-------SQQLQALENNPQEQQANK--LFRTKVGADEVAEIVSRMTGIPV 550

Query: 369 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 428
           SK+++ ER+KLL +E +L  RVVGQ+EA+ AVSNAIRRSRSGL+D  +PYGSF+FLGPTG
Sbjct: 551 SKMMEGERDKLLKMEEVLHNRVVGQNEAVRAVSNAIRRSRSGLADPNKPYGSFLFLGPTG 610

Query: 429 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 488
           VGKTELCK L++ +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRR
Sbjct: 611 VGKTELCKALASFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRR 670

Query: 489 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 548
           KPYS+ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M
Sbjct: 671 KPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSHHIQQM 730

Query: 549 EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKM 608
              D E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L   
Sbjct: 731 GTSDYEAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLAAQ 790

Query: 609 NMDLKISKAALKKISNIGFDLIYGAR 634
           N+ LK+  AAL  I+  GFD +YGAR
Sbjct: 791 NLHLKVDDAALDLIAKAGFDPVYGAR 816


>gi|407715566|ref|YP_006836846.1| ATP-dependent Clp protease, ATP-binding subunit ClpB
           [Cycloclasticus sp. P1]
 gi|407255902|gb|AFT66343.1| ATP-dependent Clp protease, ATP-binding subunit ClpB
           [Cycloclasticus sp. P1]
          Length = 859

 Score =  836 bits (2160), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/622 (62%), Positives = 518/622 (83%), Gaps = 6/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L SK++L LD+A L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPENLKSKRLLSLDMAALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 260 KAVLNDVSKQEGQVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGDLHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHH V+ITDPAIV+A+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHSVDITDPAIVSAAVLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDE+A++I++E+DSKPE MD+LERRLIQLKIE EA+K+E D++S K
Sbjct: 380 YITDRQLPDKAIDLIDESASRIRMEMDSKPESMDRLERRLIQLKIEREALKKETDDASIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L++ EI++L+ +YA+LE++WK EK  ++ S Q KEE+EKV+L++  A R  D   +S
Sbjct: 440 RLQLLETEIDQLDKEYADLEEVWKSEKAAMQGSAQHKEELEKVKLEMETARRAGDLTRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGE+ +LE+ ++E  +      +    FTLL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGEIPRLEKAIQEAEEG-----SGEQDFTLLRNKVTEEEIAEVVSKWTGIPVSKMLE 554

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVS+AIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 555 GEREKLLQMEVGLSDRVIGQEEAVKAVSDAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 614

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+I+RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 615 LCKALAEFLFDTEEAIVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 674

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           IL+DE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD+I+E+  + +
Sbjct: 675 ILMDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDRIQELAGEAN 734

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K AVM  V  +FRPEFINRID+ +VF  L R  I +I  +Q++IL+ +L   +++L
Sbjct: 735 YNEMKSAVMEVVGQHFRPEFINRIDESVVFHPLGRTQIRAITTLQVDILRQRLQDRDIEL 794

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +S+AAL K+   GFD +YGAR
Sbjct: 795 VVSEAALDKLGEAGFDPVYGAR 816


>gi|254492204|ref|ZP_05105378.1| ATPase, AAA family [Methylophaga thiooxidans DMS010]
 gi|224462529|gb|EEF78804.1| ATPase, AAA family [Methylophaga thiooxydans DMS010]
          Length = 861

 Score =  836 bits (2160), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/622 (62%), Positives = 515/622 (82%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI++GEVP  +  K++L+LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVDGEVPEGMKHKRVLVLDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLNDLSKQEGSIILFIDEIHTMVGAGKAEGSMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQY+EKDAA ERRFQK++V EP +E TI ILRGL ++YEVHHGV+ITDPAIVAA+ LS+R
Sbjct: 320 RQYVEKDAALERRFQKVIVGEPSVESTIGILRGLSERYEVHHGVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+LERRLIQLKIE  A+K+E D++SKK
Sbjct: 380 YITDRNLPDKAIDLIDEAASRIRMEIDSKPESLDRLERRLIQLKIERVALKKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ E+ KL  +Y +LE++WK EK  +  SQ +KEE+EK R +++ A R +D++ ++
Sbjct: 440 RLDTLEAEMKKLAREYTDLEEVWKSEKAALHGSQHVKEELEKARQELDAANRSADYEKMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL+YG + +LE+ L   +Q ++Q      +FTLL+ KVG EEIAE+VS+ TGIPVSK+++
Sbjct: 500 KLQYGRIPELEKQLDMATQAEMQ------EFTLLRNKVGEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL ++  L +RV+GQDEA+S+V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLKMDEALHERVIGQDEAVSSVANAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+ EE+++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYSL
Sbjct: 614 LCKSLATFLFDTEEAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS+ I+EM   + 
Sbjct: 674 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSNVIQEMAGEEN 733

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K AVM  V  +FRPEFINR+DD++VF  L ++ I +IA+IQL  L+ +L + ++ L
Sbjct: 734 YQQMKQAVMEIVGQHFRPEFINRVDDVVVFHPLQQEQIRAIADIQLEHLRQRLAERDIKL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +++  AL  I+  GFD +YGAR
Sbjct: 794 QVADEALDMIAEAGFDPVYGAR 815


>gi|429743828|ref|ZP_19277364.1| ATP-dependent chaperone protein ClpB [Neisseria sp. oral taxon 020
           str. F0370]
 gi|429164509|gb|EKY06640.1| ATP-dependent chaperone protein ClpB [Neisseria sp. oral taxon 020
           str. F0370]
          Length = 860

 Score =  836 bits (2159), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/621 (62%), Positives = 514/621 (82%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMERMHVEKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ L+ +YA+L++IWK EK     +  IK++I++++ KI +A R+ D+   S
Sbjct: 440 RLELIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQIDEIKFKIEQAKRQGDFARAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGEL KL   L+         P+   +  L +T+VG++E+AEIVSR TGIPV+K+++
Sbjct: 500 ELEYGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVAKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 676 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  LN+ NI SIA IQL  L+ +L   N+ L 
Sbjct: 736 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLNQANIRSIAKIQLKGLEKRLAAQNLRLN 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +  AAL  I+  GFD +YGAR
Sbjct: 796 VDDAALDLIAQAGFDPVYGAR 816


>gi|296314090|ref|ZP_06864031.1| ATP-dependent chaperone protein ClpB [Neisseria polysaccharea ATCC
           43768]
 gi|296839347|gb|EFH23285.1| ATP-dependent chaperone protein ClpB [Neisseria polysaccharea ATCC
           43768]
          Length = 857

 Score =  835 bits (2158), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/621 (62%), Positives = 515/621 (82%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E   + +E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ L+ +YA+L++IWK EK     +  IK++++ +++KI +A R+ D+   S
Sbjct: 440 RLELIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGEL KL   L+         P+   +  L +T+VG++E+AEIVSR TGIPV+K+++
Sbjct: 500 ELEYGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVAKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 676 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 736 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLT 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 796 VSDAALDIIAKAGFDPIYGAR 816


>gi|187478914|ref|YP_786938.1| ATP-dependent protease ATPase subunit [Bordetella avium 197N]
 gi|115423500|emb|CAJ50034.1| ATP-dependent protease, ATPase subunit (chaperone) [Bordetella
           avium 197N]
          Length = 867

 Score =  835 bits (2158), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/623 (63%), Positives = 521/623 (83%), Gaps = 3/623 (0%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+N EVP +L  K++L LD+A LLAG K+RGEFE+RLK
Sbjct: 200 NPVLIGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAGLLAGAKFRGEFEERLK 259

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +LKE+S +    I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EYR
Sbjct: 260 AVLKELSQDDGQNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEYR 319

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           +YIEKDAA ERRFQK+LV EPD+E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS+RY
Sbjct: 320 KYIEKDAALERRFQKVLVGEPDVESTIAILRGLQERYEIHHGVDITDPAIVAAAELSHRY 379

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DRF+PDKAIDLIDEAA++I++EIDSKPE+MDKL+RR+IQLKIE EA+K+E D++S +R
Sbjct: 380 ITDRFLPDKAIDLIDEAASRIRMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDDASLRR 439

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L  I++E+ +L+ +Y + E++WK EK  ++ +Q IKEEI++VR ++ +  RK  +  +++
Sbjct: 440 LAAIEEELERLQREYNDYEEVWKAEKAAVQGAQSIKEEIDRVRAEMAELQRKGQFDKLAE 499

Query: 315 LKYGELNKLERILK--EKSQKDIQLPN-NANKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           L+YG+L +LE  LK  + ++ DI+     + K  LL+T+VG+EEIAE+VSR TGIPVSK+
Sbjct: 500 LQYGKLPELEARLKAADMAESDIERAEAKSGKPKLLRTQVGAEEIAEVVSRATGIPVSKM 559

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ ER+KLL++E+ L KRVVGQDEA+S V++AIRRSR+GL+D  +PYGSF+FLGPTGVGK
Sbjct: 560 MEGERDKLLHMEDALHKRVVGQDEAVSLVADAIRRSRAGLADPSKPYGSFLFLGPTGVGK 619

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TEL + L+  +F++EE +IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRRKPY
Sbjct: 620 TELTRALADFLFDSEEHLIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRKPY 679

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           S++LLDE+EKA+ DVFN+LLQ+LDDG LTD +GRT++FRNT+IVMTSNLGS +I+ M   
Sbjct: 680 SVVLLDEVEKAHPDVFNVLLQVLDDGGLTDGQGRTVDFRNTVIVMTSNLGSQQIQSMSGK 739

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E+IK  VM E+K   RPEF+NRID+++VF  L+ ++I SIA IQ+  L ++L K  M 
Sbjct: 740 PYEVIKDVVMEELKQTLRPEFLNRIDEVVVFHGLDAQHIESIARIQIKRLASRLEKQEMR 799

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +S AAL +I+ +GFD ++GAR
Sbjct: 800 LDVSDAALSEIALVGFDPVFGAR 822


>gi|254674233|emb|CBA10017.1| ATP-dependent protease, ATPase subunit [Neisseria meningitidis
           alpha275]
          Length = 859

 Score =  835 bits (2156), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/621 (63%), Positives = 514/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLT 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|335042180|ref|ZP_08535207.1| ATPase with chaperone activity, ATP-binding subunit [Methylophaga
           aminisulfidivorans MP]
 gi|333788794|gb|EGL54676.1| ATPase with chaperone activity, ATP-binding subunit [Methylophaga
           aminisulfidivorans MP]
          Length = 861

 Score =  835 bits (2156), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/622 (62%), Positives = 517/622 (83%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+ + +K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGMKNKRVLALDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  II+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTLNEY
Sbjct: 260 KAVLNDLSKQEGQIILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQY+EKDAA ERRFQK++V EP +E TI+ILRGL ++YEVHHGV+ITDPAIVAA+ LS R
Sbjct: 320 RQYVEKDAALERRFQKVIVGEPTVESTIAILRGLAERYEVHHGVDITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLKIE  A+K++ D++SKK
Sbjct: 380 YITDRKLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKIERMALKKQSDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ E+ KL  +Y +LE++WK EK  +  SQ +KEE+EK RL+++ A R +D++ ++
Sbjct: 440 RLETLETEMKKLAREYTDLEEVWKSEKASLHGSQHVKEELEKARLELDAANRSADYEKMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL+YG + +LE+ LK  ++ ++Q      +FTLL+ KVG EEIAE+VS+ TGIPVSK+++
Sbjct: 500 KLQYGRIPELEKQLKLATEAEMQ------EFTLLRNKVGEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +++ L + V+GQDEA+S+V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLKMDDALHETVIGQDEAVSSVANAIRRSRAGLSDPHRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+ ++++IRIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKSLANFLFDTQDAMIRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I+EM   + 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSSVIQEMAGEEN 733

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K AVM  V  +FRPEFINR+DD++VF  L +  I +IA IQL+ L+ +L + +M L
Sbjct: 734 YDAMKAAVMEIVSQHFRPEFINRVDDVVVFHPLQQAQIRAIAEIQLSHLRARLAERDMKL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +S  AL  I++ GFD +YGAR
Sbjct: 794 MLSDEALDLIASEGFDPVYGAR 815


>gi|261380959|ref|ZP_05985532.1| ATP-dependent chaperone protein ClpB [Neisseria subflava NJ9703]
 gi|284796218|gb|EFC51565.1| ATP-dependent chaperone protein ClpB [Neisseria subflava NJ9703]
          Length = 857

 Score =  835 bits (2156), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/621 (62%), Positives = 514/621 (82%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E   + +E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ L+ +YA+L++IWK EK     +  IK++++ +++KI +A R+ D+   S
Sbjct: 440 RLELIDEEIDGLQKEYADLDEIWKAEKAASSSTTDIKKQMDDIKVKIEQAKRQGDFARAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGEL KL   L+         P+   +  L +T+VG++E+AEIVSR TGIPVSK+++
Sbjct: 500 ELEYGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH++SRLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVSRLIGAPPGYVGYEEGGYLTEQVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 676 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L   ++ LK
Sbjct: 736 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEAQHLHLK 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +  AAL  I+  GFD +YGAR
Sbjct: 796 VDDAALDLIAEAGFDPVYGAR 816


>gi|268597099|ref|ZP_06131266.1| chaperone clpB [Neisseria gonorrhoeae FA19]
 gi|268603397|ref|ZP_06137564.1| ClpB protein [Neisseria gonorrhoeae PID1]
 gi|268681877|ref|ZP_06148739.1| ClpB protein [Neisseria gonorrhoeae PID332]
 gi|268550887|gb|EEZ45906.1| chaperone clpB [Neisseria gonorrhoeae FA19]
 gi|268587528|gb|EEZ52204.1| ClpB protein [Neisseria gonorrhoeae PID1]
 gi|268622161|gb|EEZ54561.1| ClpB protein [Neisseria gonorrhoeae PID332]
          Length = 857

 Score =  835 bits (2156), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/621 (62%), Positives = 515/621 (82%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E   + +E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ L+ +YA+L++IWK EK     +  IK++++ +++KI +A R+ D+   S
Sbjct: 440 RLELIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGEL KL   L+         P+   +  L +T+VG++E+AEIVSR TGIPVSK+++
Sbjct: 500 ELEYGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQ+EA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLKMEEVLHRRVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 676 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 736 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLT 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 796 VSDAALDIIAKAGFDPIYGAR 816


>gi|319638313|ref|ZP_07993076.1| chaperone ClpB [Neisseria mucosa C102]
 gi|317400586|gb|EFV81244.1| chaperone ClpB [Neisseria mucosa C102]
          Length = 857

 Score =  835 bits (2156), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/621 (62%), Positives = 513/621 (82%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E   + +E DE+SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ L+ +YA+L++IWK EK     +  IK++++ +++KI +A R+ D+   S
Sbjct: 440 RLELIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGEL KL   L+         P    +  L +T+VG++E+AEIVSR TGIPVSK+++
Sbjct: 500 ELEYGELPKLGAQLQAAESN----PEGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 676 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L   ++ LK
Sbjct: 736 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEAQHLHLK 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +  AAL  I+  GFD +YGAR
Sbjct: 796 VDDAALDLIAKAGFDPVYGAR 816


>gi|421551086|ref|ZP_15997086.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 69166]
 gi|433471850|ref|ZP_20429233.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 68094]
 gi|433477915|ref|ZP_20435233.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 70012]
 gi|433522194|ref|ZP_20478881.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 61103]
 gi|433526339|ref|ZP_20482969.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 69096]
 gi|433539247|ref|ZP_20495722.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 70030]
 gi|402328620|gb|EJU63987.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 69166]
 gi|432207807|gb|ELK63795.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 68094]
 gi|432214731|gb|ELK70627.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 70012]
 gi|432258572|gb|ELL13854.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 61103]
 gi|432261103|gb|ELL16360.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 69096]
 gi|432272970|gb|ELL28072.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 70030]
          Length = 859

 Score =  835 bits (2156), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/623 (63%), Positives = 515/623 (82%), Gaps = 6/623 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLE--RILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           KL Y +L  LE  R   E++  D   P N     LL+  VG+EEIAE+VSR TGIPVSK+
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPAN----KLLRNNVGAEEIAEVVSRMTGIPVSKM 555

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGK
Sbjct: 556 MEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGK 615

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPY
Sbjct: 616 TELCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPY 675

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           S+ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   
Sbjct: 676 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQ 735

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ 
Sbjct: 736 DYEAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLR 795

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +S AAL  I+  GFD IYGAR
Sbjct: 796 LTVSDAALDIIAKAGFDPIYGAR 818


>gi|313668136|ref|YP_004048420.1| ClpB protein [Neisseria lactamica 020-06]
 gi|313005598|emb|CBN87035.1| ClpB protein [Neisseria lactamica 020-06]
          Length = 857

 Score =  835 bits (2156), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/621 (62%), Positives = 514/621 (82%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIG PGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGGPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E   + +E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ L+ +YA+L++IWK EK     +  IK++++ +++KI +A R+ D+   S
Sbjct: 440 RLELIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGEL KL   L+         P+   +  L +T+VG++E+AEIVSR TGIPVSK+++
Sbjct: 500 ELEYGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 676 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 736 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLT 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 796 VSDAALDIIAKAGFDPIYGAR 816


>gi|385855517|ref|YP_005902030.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M01-240355]
 gi|325204458|gb|ADY99911.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M01-240355]
          Length = 859

 Score =  834 bits (2154), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/621 (63%), Positives = 514/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLT 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|416169730|ref|ZP_11608208.1| ATP-dependent chaperone ClpB [Neisseria meningitidis OX99.30304]
 gi|325130543|gb|EGC53296.1| ATP-dependent chaperone ClpB [Neisseria meningitidis OX99.30304]
          Length = 859

 Score =  834 bits (2154), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/621 (63%), Positives = 514/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLT 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|433497165|ref|ZP_20454199.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis M7089]
 gi|433499232|ref|ZP_20456239.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis M7124]
 gi|433501197|ref|ZP_20458181.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM174]
 gi|432232878|gb|ELK88513.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis M7089]
 gi|432233659|gb|ELK89285.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis M7124]
 gi|432235003|gb|ELK90622.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM174]
          Length = 859

 Score =  834 bits (2154), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/621 (63%), Positives = 514/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMSIQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLT 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|433513789|ref|ZP_20470577.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 63049]
 gi|432246436|gb|ELL01883.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 63049]
          Length = 859

 Score =  833 bits (2153), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/621 (63%), Positives = 514/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLA 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|225075318|ref|ZP_03718517.1| hypothetical protein NEIFLAOT_00321 [Neisseria flavescens
           NRL30031/H210]
 gi|224953493|gb|EEG34702.1| hypothetical protein NEIFLAOT_00321 [Neisseria flavescens
           NRL30031/H210]
          Length = 857

 Score =  833 bits (2153), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/621 (62%), Positives = 515/621 (82%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E   + +E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ L+ +YA+L++IWK EK     +  IK++++ +++KI +A R+ D+   S
Sbjct: 440 RLELIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGEL KL   L+         P+   +  L +T+VG++E+AEIVSR TGIPVSK+++
Sbjct: 500 ELEYGELPKLSAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 676 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI +IA IQL  L+ +L K N+ L 
Sbjct: 736 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRNIAKIQLKGLEKRLEKQNLRLT 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD +YGAR
Sbjct: 796 VSDAALDIIAKAGFDPVYGAR 816


>gi|161870340|ref|YP_001599510.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Neisseria
           meningitidis 053442]
 gi|161595893|gb|ABX73553.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Neisseria
           meningitidis 053442]
          Length = 859

 Score =  833 bits (2153), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/621 (63%), Positives = 514/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLT 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|421542768|ref|ZP_15988873.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM255]
 gi|402316565|gb|EJU52108.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM255]
          Length = 859

 Score =  833 bits (2153), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/621 (63%), Positives = 514/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLT 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|319778197|ref|YP_004129110.1| ClpB protein [Taylorella equigenitalis MCE9]
 gi|397661981|ref|YP_006502681.1| chaperone protein ClpB [Taylorella equigenitalis ATCC 35865]
 gi|317108221|gb|ADU90967.1| ClpB protein [Taylorella equigenitalis MCE9]
 gi|394350160|gb|AFN36074.1| chaperone protein ClpB [Taylorella equigenitalis ATCC 35865]
 gi|399115894|emb|CCG18699.1| chaperone protein ClpB [Taylorella equigenitalis 14/56]
          Length = 856

 Score =  833 bits (2152), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/635 (62%), Positives = 525/635 (82%), Gaps = 10/635 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP SL  K++L LD+A LLAG K+RGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPESLRGKRVLSLDMASLLAGAKFRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++ ++ + I+FIDE+HTM+G G  EG+IDAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 259 KAVLKELAQDEGNNIVFIDEIHTMVGAGGAEGAIDAGNMLKPALSRGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+L++EPD+E TI+ILRGL+++YE+HHGVEITDPAIVAA+ELS R
Sbjct: 319 RKYIEKDAALERRFQKVLIDEPDVEATIAILRGLKERYEIHHGVEITDPAIVAAAELSNR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+I++EIDSKPE+MD+L+RR+IQLKIE EA++RE DE+SK+
Sbjct: 379 YITDRFLPDKAIDLIDEAAARIRMEIDSKPEVMDRLDRRIIQLKIEREAVRREDDEASKR 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI+ E+ +L+ +Y + E+IWK EK+ +   Q I+E+I+KV+ ++ +  R+ +++ +S
Sbjct: 439 RLQLIEDELARLQREYDDYEQIWKAEKSSVHSVQSIREDIDKVKAQMAEYQRQGEYEKLS 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L  LE  LK   + ++       K  LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 499 ELQYGKLPDLELRLKSAEKGEV-------KNQLLRTEVGTEEIAEVVSRATGIPVSKMMQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER KLL +E+ L +RVVGQDEA+  VS+AIRRSR+GL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 552 GERAKLLTMEDRLHERVVGQDEAVRLVSDAIRRSRAGLADPSKPYGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+++E ++RIDMSEF+EKH+++RLIGAPPGYIGYEEGGYLTE +RRKPYS+
Sbjct: 612 LTKALANFLFDSDEHMVRIDMSEFMEKHTVARLIGAPPGYIGYEEGGYLTEAIRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSN+GS +I++M     
Sbjct: 672 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNIGSQQIQKMSGEPY 731

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK  V +E+K  FRPEF+NRID+I+VF  L ++ I +IA IQ+  L  +L +  M+L+
Sbjct: 732 EKIKDVVWDELKDSFRPEFLNRIDEIVVFHGLEKEQIANIAKIQIKRLAQRLAQFEMNLE 791

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLK 648
           IS  A+ KI+  GFD ++GAR +   K+S+  L++
Sbjct: 792 ISDEAIAKIAEAGFDPVFGARPL---KRSIQQLIE 823


>gi|218768467|ref|YP_002342979.1| ClpB protein [Neisseria meningitidis Z2491]
 gi|433480088|ref|ZP_20437375.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 63041]
 gi|433519182|ref|ZP_20475905.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 65014]
 gi|433541327|ref|ZP_20497775.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 63006]
 gi|54035904|sp|Q9JTP9.1|CLPB_NEIMA RecName: Full=Chaperone protein ClpB
 gi|121052475|emb|CAM08814.1| ClpB protein [Neisseria meningitidis Z2491]
 gi|432215048|gb|ELK70939.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 63041]
 gi|432256110|gb|ELL11434.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 65014]
 gi|432276868|gb|ELL31922.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 63006]
          Length = 859

 Score =  833 bits (2152), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/621 (63%), Positives = 514/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLA 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|421563669|ref|ZP_16009485.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
           NM2795]
 gi|421564898|ref|ZP_16010685.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
           NM3081]
 gi|421907229|ref|ZP_16337113.1| Chaperone protein clpB Heat shock protein F84,1 [Neisseria
           meningitidis alpha704]
 gi|433507471|ref|ZP_20464376.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 9757]
 gi|393291645|emb|CCI73100.1| Chaperone protein clpB Heat shock protein F84,1 [Neisseria
           meningitidis alpha704]
 gi|402340154|gb|EJU75357.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
           NM2795]
 gi|402345503|gb|EJU80619.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
           NM3081]
 gi|432240488|gb|ELK96023.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 9757]
          Length = 859

 Score =  833 bits (2152), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/623 (62%), Positives = 515/623 (82%), Gaps = 6/623 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLE--RILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           KL Y +L  LE  R   E++  D   P N     LL+  VG+EEIAE+VSR TGIPVSK+
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPAN----KLLRNNVGAEEIAEVVSRMTGIPVSKM 555

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGK
Sbjct: 556 MEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGK 615

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPY
Sbjct: 616 TELCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPY 675

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           S+ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   
Sbjct: 676 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQ 735

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E +K  VM +VK +FRPE INRID+++VF  L++ NI +IA IQL  L+ +L K N+ 
Sbjct: 736 DYEAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRNIAKIQLKGLEKRLEKQNLR 795

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +S AAL  I+  GFD IYGAR
Sbjct: 796 LTVSDAALDIIAQAGFDPIYGAR 818


>gi|325267605|ref|ZP_08134257.1| chaperone protein ClpB [Kingella denitrificans ATCC 33394]
 gi|324980955|gb|EGC16615.1| chaperone protein ClpB [Kingella denitrificans ATCC 33394]
          Length = 858

 Score =  833 bits (2152), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/622 (63%), Positives = 511/622 (82%), Gaps = 5/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL  K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRGKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLNDLAQDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ +YE+HHGVEITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQDRYEIHHGVEITDPAIVAAAELSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IKIE ++KPE MDKL+RR+IQLK+E   + +E DE+SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKIEKETKPEQMDKLDRRIIQLKMEKMHVSKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI  LE +YA+L+++WK EK        +K +I++++ KI +A R  D+   S
Sbjct: 440 RLALIDEEIAGLEKEYADLDEVWKAEKASAVSLTDLKAQIDEIKHKIEQAKRVGDYGLAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGEL KL   LK+  +   Q   N    TL +T+VG+EEIAEIVSR TGIPVSK+++
Sbjct: 500 ELEYGELPKLTLQLKDAERAGNQKTTN----TLFRTEVGAEEIAEIVSRMTGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E++L  RVVGQDEA+ AV++AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 556 GEREKLLRMEDVLHNRVVGQDEAVRAVADAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F++E+ +IR+DMSE++EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKTLASFLFDSEDHLIRVDMSEYMEKHSVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT++VMTSN+GS  I+E+  +  
Sbjct: 676 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVVVMTSNIGSQHIQELGAEAP 735

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E +K AVM +VK YFRPE INRID+++VF  L + +I  IA IQL+ LK +L    + L
Sbjct: 736 YEAVKAAVMADVKDYFRPELINRIDEVVVFHALGQAHIRRIAQIQLDGLKKRLEAQGLYL 795

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S AAL  ++  GFD IYGAR
Sbjct: 796 QVSDAALDVLAKAGFDPIYGAR 817


>gi|268601078|ref|ZP_06135245.1| chaperone clpB [Neisseria gonorrhoeae PID18]
 gi|268585209|gb|EEZ49885.1| chaperone clpB [Neisseria gonorrhoeae PID18]
          Length = 857

 Score =  833 bits (2152), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/621 (62%), Positives = 514/621 (82%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVA +ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVATAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E   + +E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ L+ +YA+L++IWK EK     +  IK++++ +++KI +A R+ D+   S
Sbjct: 440 RLELIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGEL KL   L+         P+   +  L +T+VG++E+AEIVSR TGIPVSK+++
Sbjct: 500 ELEYGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQ+EA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLKMEEVLHRRVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 676 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 736 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLT 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 796 VSDAALDIIAKAGFDPIYGAR 816


>gi|240014358|ref|ZP_04721271.1| putative ClpB protein [Neisseria gonorrhoeae DGI18]
 gi|240016791|ref|ZP_04723331.1| putative ClpB protein [Neisseria gonorrhoeae FA6140]
 gi|240121920|ref|ZP_04734882.1| putative ClpB protein [Neisseria gonorrhoeae PID24-1]
 gi|291044107|ref|ZP_06569823.1| ClpB protein [Neisseria gonorrhoeae DGI2]
 gi|291012570|gb|EFE04559.1| ClpB protein [Neisseria gonorrhoeae DGI2]
          Length = 857

 Score =  833 bits (2151), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/621 (62%), Positives = 514/621 (82%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVA +ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVATAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E   + +E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ L+ +YA+L++IWK EK     +  IK++++ +++KI +A R+ D+   S
Sbjct: 440 RLELIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGEL KL   L+         P+   +  L +T+VG++E+AEIVSR TGIPVSK+++
Sbjct: 500 ELEYGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQ+EA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLKMEEVLHRRVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 676 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 736 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLT 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 796 VSDAALDIIAKAGFDPIYGAR 816


>gi|422111082|ref|ZP_16380853.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|309378342|emb|CBX23039.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 857

 Score =  833 bits (2151), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/621 (62%), Positives = 514/621 (82%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQLK+E   + +E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLKMEKMHVAKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ L+ +YA+L++IWK EK     +  IK++++ +++KI +A R+ D+   S
Sbjct: 440 RLELIDEEIDGLQKEYADLDEIWKAEKAASSSTADIKKQMDDIKVKIEQAKRQGDFARAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGEL KL   L+         P+   +  L +T+VG++E+AEIVSR TGIPV+K+++
Sbjct: 500 ELEYGELPKLGAQLQAAESN----PDGKKQNKLFRTEVGADEVAEIVSRMTGIPVAKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 676 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 736 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLT 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL  I+  GFD IYGAR
Sbjct: 796 VSDTALDIIAKAGFDPIYGAR 816


>gi|418290904|ref|ZP_12902993.1| ATP-dependent chaperone ClpB [Neisseria meningitidis NM220]
 gi|421544792|ref|ZP_15990865.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM140]
 gi|421546880|ref|ZP_15992921.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM183]
 gi|421549129|ref|ZP_15995147.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
           NM2781]
 gi|421552237|ref|ZP_15998216.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM576]
 gi|372200802|gb|EHP14820.1| ATP-dependent chaperone ClpB [Neisseria meningitidis NM220]
 gi|402322356|gb|EJU57818.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM183]
 gi|402322705|gb|EJU58156.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM140]
 gi|402324519|gb|EJU59951.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
           NM2781]
 gi|402332390|gb|EJU67717.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM576]
          Length = 859

 Score =  833 bits (2151), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/621 (63%), Positives = 514/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLT 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|416212795|ref|ZP_11622019.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M01-240013]
 gi|325144759|gb|EGC67052.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M01-240013]
          Length = 859

 Score =  833 bits (2151), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/621 (63%), Positives = 514/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLT 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|254805248|ref|YP_003083469.1| putative ClpB protein [Neisseria meningitidis alpha14]
 gi|254668790|emb|CBA06732.1| putative ClpB protein [Neisseria meningitidis alpha14]
          Length = 859

 Score =  833 bits (2151), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/621 (63%), Positives = 514/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLT 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|418288652|ref|ZP_12901108.1| ATP-dependent chaperone ClpB [Neisseria meningitidis NM233]
 gi|372201432|gb|EHP15363.1| ATP-dependent chaperone ClpB [Neisseria meningitidis NM233]
          Length = 859

 Score =  832 bits (2150), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/621 (63%), Positives = 514/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ LE +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEIDGLEKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLT 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|404379863|ref|ZP_10984912.1| chaperone ClpB [Simonsiella muelleri ATCC 29453]
 gi|294484380|gb|EFG32063.1| chaperone ClpB [Simonsiella muelleri ATCC 29453]
          Length = 857

 Score =  832 bits (2150), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/622 (63%), Positives = 516/622 (82%), Gaps = 6/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL  K++L+LD+A L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRGKRLLVLDLAALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLNDLAKDDGNSLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ++YE+HHGV+ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEATIAILRGLQERYEIHHGVDITDPAIVAAAELSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+E+DSKPE MDKL+RR+IQL++E   + +E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRIKMELDSKPEQMDKLDRRIIQLQMEKMHVAKETDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI  L+ +YA+L++IWK EK     S  IK++I+ ++LKI +A R  D+   S
Sbjct: 440 RLALIDEEIASLQKEYADLDEIWKAEKAASSSSADIKKQIDDLKLKIEQAKRAGDYAKAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L  L + L+     D+      NK  L +T+VG+EEIAEIVSR TGIPVSK+++
Sbjct: 500 ELEYGQLPNLTQQLQ---AADVSGSLKTNK--LFRTQVGAEEIAEIVSRMTGIPVSKMME 554

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L KRV+GQDEA+ AV++AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 555 GERDKLLKMEEVLHKRVIGQDEAVRAVADAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 614

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F++E+ +IRIDMSE++EKHSI+RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 615 LCKTLASFLFDSEDHLIRIDMSEYMEKHSIARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 674

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I+ M +  D
Sbjct: 675 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQNIQNMGDTSD 734

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K AVM +VK YFRPE INRID+++VF  LN+ NI +IA IQL  LK +L   N+ L
Sbjct: 735 YDAVKAAVMEDVKAYFRPELINRIDEVVVFHGLNQANIRNIAQIQLGSLKRRLAAQNLRL 794

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S AAL  I+  GFD IYGAR
Sbjct: 795 EVSDAALDLIAESGFDPIYGAR 816


>gi|121635155|ref|YP_975400.1| ClpB protein [Neisseria meningitidis FAM18]
 gi|433494997|ref|ZP_20452063.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM762]
 gi|120866861|emb|CAM10620.1| ClpB protein [Neisseria meningitidis FAM18]
 gi|432229385|gb|ELK85073.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM762]
          Length = 859

 Score =  832 bits (2150), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/621 (63%), Positives = 514/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLT 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|385341628|ref|YP_005895499.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M01-240149]
 gi|385857525|ref|YP_005904037.1| ATP-dependent chaperone ClpB [Neisseria meningitidis NZ-05/33]
 gi|416187148|ref|ZP_11614127.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M0579]
 gi|325136561|gb|EGC59163.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M0579]
 gi|325201834|gb|ADY97288.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M01-240149]
 gi|325208414|gb|ADZ03866.1| ATP-dependent chaperone ClpB [Neisseria meningitidis NZ-05/33]
          Length = 859

 Score =  832 bits (2150), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/621 (62%), Positives = 514/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI +IA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLT 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|163857486|ref|YP_001631784.1| ATP-dependent protease, ATPase subunit [Bordetella petrii DSM
           12804]
 gi|163261214|emb|CAP43516.1| ATP-dependent protease, ATPase subunit [Bordetella petrii]
          Length = 886

 Score =  832 bits (2150), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/621 (63%), Positives = 515/621 (82%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP +L  K++L LD+A LLAG K+RGEFE+RL
Sbjct: 221 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERL 280

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++ +    I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 281 KAVLKELAQDDGQNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 340

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+R
Sbjct: 341 RKYIEKDAALERRFQKVLVNEPDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSHR 400

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+I++EIDSKPE+MDKL+RR+IQLKIE EA+++E D++SK+
Sbjct: 401 YITDRFLPDKAIDLIDEAAARIRMEIDSKPEVMDKLDRRIIQLKIEREAVRKESDDASKR 460

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I++E+ KL+ +Y + E+IWK EK  ++ +Q IKEEI++VR  + +  RK  +  ++
Sbjct: 461 RLAVIEEELEKLQREYNDYEEIWKAEKASVQGTQAIKEEIDRVRADMAELQRKGQFDKLA 520

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK     + Q      +  LL+T+VG+EEIAE+VSR TGIPV+K++Q
Sbjct: 521 ELQYGKLPELEARLKAADTAEQQGEKADGQPRLLRTQVGAEEIAEVVSRATGIPVAKMMQ 580

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L KRVVGQDEA+  VS+AIRRSR+GL+D  RPYGSF+FLGPTGVGKTE
Sbjct: 581 GEREKLLQMEDHLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKTE 640

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L + L+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 641 LTRALADFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 700

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I+ M     
Sbjct: 701 VLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQSMAGQPY 760

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E+IK  V +E+K  FRPEF+NRID+++VF  L  ++I SIA IQL  L  +L +  M L+
Sbjct: 761 EVIKEVVWDELKQSFRPEFLNRIDEVVVFHGLEAQHIESIARIQLKRLAERLERQEMRLE 820

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL +++  GFD ++GAR
Sbjct: 821 VSDAALAELARAGFDPVFGAR 841


>gi|114321705|ref|YP_743388.1| ATPase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114228099|gb|ABI57898.1| ATPase AAA-2 domain protein [Alkalilimnicola ehrlichii MLHE-1]
          Length = 864

 Score =  832 bits (2150), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/623 (62%), Positives = 515/623 (82%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLA RIINGEVP  L +K+IL LD+A L+AG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIAEGLANRIINGEVPEGLKTKRILSLDMAALIAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++  +  II+FIDE+HT++G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLKDLAKQEGQIILFIDEIHTIVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R++IEKDAA ERRFQK+LV+EP +E+T++ILRGL+++YEVHHGVEITDPAIVAA++LS+R
Sbjct: 319 RKHIEKDAALERRFQKVLVDEPSVEDTVAILRGLKERYEVHHGVEITDPAIVAAAQLSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++IK+EIDSKPE MD+LERRLIQLKIE EA+ +E D++S+K
Sbjct: 379 YITDRQLPDKAIDLVDEAASRIKMEIDSKPEEMDRLERRLIQLKIEREALAKEEDDASRK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EIN+LE +Y  LE+IW  EK  ++ +Q IKE++E+ R +++ A R  D   +S
Sbjct: 439 RLDALEGEINELEDEYKALEEIWNSEKAAVEGTQSIKEQLERARQELDTARRAGDLGRMS 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER      Q D+ L    +   LL+T VG+EEIAE+VSR TGIPVSK+++
Sbjct: 499 ELQYGRIPELER------QLDLALQAEMHDTQLLRTSVGTEEIAEVVSRWTGIPVSKMLE 552

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  + KRVVGQDEA++AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 553 GERDKLLRMEEEIRKRVVGQDEAVAAVANAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 612

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F+ EE++IR+DMSEF+EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 613 LCKALASFLFDTEEAMIRVDMSEFMEKHAVARLIGAPPGYVGYEEGGYLTEHVRRKPYSV 672

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFN+LLQ+LDDGRLTD+ GRT++FRNT+IVMTSNLGSD I++M  G++
Sbjct: 673 ILLDEVEKAHADVFNVLLQVLDDGRLTDSHGRTVDFRNTVIVMTSNLGSDVIQQM-AGEE 731

Query: 554 --EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             + ++ AVM  V  +FRPEFINR+D+++VF  L R++I SI +IQL  L  +L    + 
Sbjct: 732 HYQEMRSAVMEIVGTHFRPEFINRVDEVVVFHPLGREHIRSITDIQLRQLNARLADKELT 791

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L++S AA  ++   GFD +YGAR
Sbjct: 792 LEVSDAAKDQLGEAGFDPVYGAR 814


>gi|433468650|ref|ZP_20426085.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 98080]
 gi|432205869|gb|ELK61885.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 98080]
          Length = 859

 Score =  832 bits (2149), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/621 (63%), Positives = 514/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ LE +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEIDGLEKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLT 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSNAALDIIAKAGFDPIYGAR 818


>gi|319941466|ref|ZP_08015794.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Sutterella
           wadsworthensis 3_1_45B]
 gi|319805086|gb|EFW01916.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Sutterella
           wadsworthensis 3_1_45B]
          Length = 872

 Score =  832 bits (2149), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/623 (62%), Positives = 517/623 (82%), Gaps = 3/623 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTA+VEGLAQRI+N EVP++L +K IL LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAVVEGLAQRIVNNEVPDTLRNKVILSLDMAGLIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           KK+L+E++  +  II+FIDE+HT++G GK EGS+DAGNMLKP L+RGELH IGATTL+EY
Sbjct: 260 KKLLQEVTAQEGKIILFIDEIHTVVGAGKTEGSMDAGNMLKPALARGELHVIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKDAA ERRFQK+ V+EP +E+TI+ILRGLQ+KYE HHGVEITDPAIVAA+ELS+R
Sbjct: 320 RKYVEKDAALERRFQKVFVDEPSVEDTIAILRGLQEKYEAHHGVEITDPAIVAAAELSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR++PDKAIDLIDEAAA++K+EIDSKPE +DKL+RRLIQLKIE EA+K+E D++SKK
Sbjct: 380 YITDRYLPDKAIDLIDEAAARVKMEIDSKPEALDKLDRRLIQLKIEREAMKKETDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  I+ EI KL  +YA+LE++WK EK+     + +++EI++VR ++++  R++ ++ ++
Sbjct: 440 RLAAIEAEIEKLSREYADLEEVWKKEKSEALGEKSVRDEIDRVRRQMDEYRRQAQYEKLA 499

Query: 314 KLKYGELNKLERILK--EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +L+Y  L KLE  LK  EK++KD +         LL+T VG+EEIAE+VSR TGIPVSK+
Sbjct: 500 ELQYAVLPKLEEKLKRAEKAEKDTEKTEKGGP-KLLRTSVGAEEIAEVVSRATGIPVSKM 558

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ ER+KLL++ + L KRV+GQDEA+  V+  I RSR+GLSD  RPYGSF+FLGPTGVGK
Sbjct: 559 MEGERQKLLHMADALEKRVIGQDEAVKRVTETILRSRAGLSDPNRPYGSFLFLGPTGVGK 618

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TEL K L+  +F+ +E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPY
Sbjct: 619 TELTKALAEFLFDTDEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPY 678

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           S+ILLDE+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+N +IVMTSNLGS +I+EM+  
Sbjct: 679 SVILLDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNCVIVMTSNLGSAEIQEMQGE 738

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
            ++ IK AVM EV+ +FRPEF+NRID+I+VF  L+  N+  IA IQL  L+ ++    + 
Sbjct: 739 PQDKIKSAVMQEVRAHFRPEFVNRIDEIVVFNSLDAANVRKIAEIQLEQLRKRMTAQQIG 798

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +++AAL +I+ +GFD  +GAR
Sbjct: 799 LDVTEAALDEIAKVGFDPQFGAR 821


>gi|385323885|ref|YP_005878324.1| chaperone ClpB (short) [Neisseria meningitidis 8013]
 gi|261392272|emb|CAX49792.1| chaperone ClpB (short) [Neisseria meningitidis 8013]
          Length = 805

 Score =  832 bits (2149), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/621 (63%), Positives = 514/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 146 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 205

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 206 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 265

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 266 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 325

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 326 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 385

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 386 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 445

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 446 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 503

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 504 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 563

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 564 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 623

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 624 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDY 683

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 684 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLT 743

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 744 VSDAALDIIAKAGFDPIYGAR 764


>gi|416182624|ref|ZP_11612099.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M13399]
 gi|325134551|gb|EGC57195.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M13399]
          Length = 859

 Score =  832 bits (2149), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/623 (62%), Positives = 515/623 (82%), Gaps = 6/623 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLE--RILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           KL Y +L  LE  R   E++  D   P N     LL+  VG+EEIAE+VSR TGIPVSK+
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPAN----KLLRNNVGAEEIAEVVSRMTGIPVSKM 555

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGK
Sbjct: 556 MEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGK 615

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPY
Sbjct: 616 TELCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPY 675

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           S+ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   
Sbjct: 676 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQ 735

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E +K  VM +VK +FRPE INRID+++VF  L++ NI +IA IQL  L+ +L K N+ 
Sbjct: 736 DYEAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLR 795

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +S AAL  I+  GFD IYGAR
Sbjct: 796 LTVSDAALDIIAKAGFDPIYGAR 818


>gi|433509683|ref|ZP_20466547.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 12888]
 gi|433511680|ref|ZP_20468500.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 4119]
 gi|432246061|gb|ELL01522.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 12888]
 gi|432246327|gb|ELL01778.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 4119]
          Length = 859

 Score =  832 bits (2148), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/623 (62%), Positives = 515/623 (82%), Gaps = 6/623 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLE--RILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           KL Y +L  LE  R   E++  D   P N     LL+  VG+EEIAE+VSR TGIPVSK+
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPAN----KLLRNNVGAEEIAEVVSRMTGIPVSKM 555

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGK
Sbjct: 556 MEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGK 615

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPY
Sbjct: 616 TELCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPY 675

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           S+ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   
Sbjct: 676 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQ 735

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E +K  VM +VK +FRPE INRID+++VF  L++ NI +IA IQL  L+ +L K N+ 
Sbjct: 736 DYEAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLR 795

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +S AAL  I+  GFD IYGAR
Sbjct: 796 LTVSDAALDIIAKAGFDPIYGAR 818


>gi|385850947|ref|YP_005897462.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M04-240196]
 gi|325205770|gb|ADZ01223.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M04-240196]
          Length = 859

 Score =  832 bits (2148), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/623 (62%), Positives = 515/623 (82%), Gaps = 6/623 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLE--RILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           KL Y +L  LE  R   E++  D   P N     LL+  VG+EEIAE+VSR TGIPVSK+
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPAN----KLLRNNVGAEEIAEVVSRMTGIPVSKM 555

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGK
Sbjct: 556 MEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGK 615

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPY
Sbjct: 616 TELCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPY 675

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           S+ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   
Sbjct: 676 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQ 735

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E +K  VM +VK +FRPE INRID+++VF  L++ NI +IA IQL  L+ +L K N+ 
Sbjct: 736 DYEAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLR 795

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +S AAL  I+  GFD IYGAR
Sbjct: 796 LTVSDAALDIIAKAGFDPIYGAR 818


>gi|304387133|ref|ZP_07369380.1| chaperone protein ClpB [Neisseria meningitidis ATCC 13091]
 gi|304338785|gb|EFM04892.1| chaperone protein ClpB [Neisseria meningitidis ATCC 13091]
          Length = 859

 Score =  832 bits (2148), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/621 (62%), Positives = 513/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++ AGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMAAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLT 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|421540725|ref|ZP_15986866.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 93004]
 gi|402317972|gb|EJU53498.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 93004]
          Length = 859

 Score =  832 bits (2148), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/623 (62%), Positives = 515/623 (82%), Gaps = 6/623 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLE--RILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           KL Y +L  LE  R   E++  D   P N     LL+  VG+EEIAE+VSR TGIPVSK+
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPAN----KLLRNNVGAEEIAEVVSRMTGIPVSKM 555

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGK
Sbjct: 556 MEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGK 615

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPY
Sbjct: 616 TELCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPY 675

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           S+ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   
Sbjct: 676 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQ 735

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E +K  VM +VK +FRPE INRID+++VF  L++ NI +IA IQL  L+ +L K N+ 
Sbjct: 736 DYEAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLR 795

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +S AAL  I+  GFD IYGAR
Sbjct: 796 LTVSDAALDIIAKAGFDPIYGAR 818


>gi|300114805|ref|YP_003761380.1| ATP-dependent chaperone ClpB [Nitrosococcus watsonii C-113]
 gi|299540742|gb|ADJ29059.1| ATP-dependent chaperone ClpB [Nitrosococcus watsonii C-113]
          Length = 865

 Score =  832 bits (2148), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/622 (63%), Positives = 508/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIIN EVP  L ++++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINSEVPEGLKNRRLLALDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+IS  + +II+FIDELHT++G GK EG++DA NMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLKDISKAEGNIILFIDELHTVVGAGKAEGAMDASNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP++E+TI+ILRGL ++YEVHHGVEITDPAIVAA+ LS+R
Sbjct: 320 RRYIEKDAALERRFQKVLVDEPNVEDTIAILRGLSERYEVHHGVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE MD+LERRLIQLKIE EA++RE DE+SK+
Sbjct: 380 YITDRKLPDKAIDLIDEAASRIRMEIDSKPEPMDRLERRLIQLKIEREALRRETDEASKR 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ E+N+LE +YA+LE+IWK EK  +  +Q IKE++E+ RL +  A R  D   +S
Sbjct: 440 RLETLETELNQLEKEYADLEEIWKAEKATLSGAQGIKEQLEQARLDLESAHRAGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++      Q D       + F LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELQK------QLDAATAVEQHDFKLLRNKVSEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RVVGQDEAI+ VSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLKMEAALHQRVVGQDEAIAVVSNAIRRSRAGLADPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+E+HS++RLIGAPPGY+G+EEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAMFLFDTEEAMVRIDMSEFMERHSVARLIGAPPGYVGFEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD  GRT++FRNT++VMTSNLGS  I+EM   D+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGHGRTVDFRNTVVVMTSNLGSHVIQEMAGEDR 733

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K AVM  V  +FRPEFINR+DD++VF  L ++ + +IA IQ+  L+ +L + +M L
Sbjct: 734 YQEMKSAVMEIVGQHFRPEFINRVDDVVVFHPLQKEQLQAIAQIQMGYLRQRLAQRDMVL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            I + AL K++  GFD +YGAR
Sbjct: 794 TIPEDALSKLAEAGFDPVYGAR 815


>gi|348618449|ref|ZP_08884974.1| Heat-shock protein, ATP-dependent Chaperone protein ClpB
           [Candidatus Glomeribacter gigasporarum BEG34]
 gi|347816249|emb|CCD29719.1| Heat-shock protein, ATP-dependent Chaperone protein ClpB
           [Candidatus Glomeribacter gigasporarum BEG34]
          Length = 863

 Score =  831 bits (2147), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 403/622 (64%), Positives = 516/622 (82%), Gaps = 1/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIG PGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGAPGVGKTAIVEGLAQRIVNGEVPETLKNKRVLALDMAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++   I+FIDELHTM+G GK EG+IDAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLNDIAKDKGQTIVFIDELHTMVGAGKAEGAIDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS R
Sbjct: 320 RKYIEKDAALERRFQKVLVKEPSVEATIAILRGLQEKYEVHHGVEITDPAIVAAAELSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA IK+EIDSKPE MD+LERRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRFLPDKAIDLIDEAAACIKMEIDSKPEAMDRLERRLIQLKIEREAVKKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI +L+ +YA+LE+IW  EK+  + S Q+KE+I++ R +I +  R+     V+
Sbjct: 440 RLQLIEEEIQRLDKEYADLEEIWTAEKSAAQGSAQLKEDIDRARAEIARLQREGKLDKVA 499

Query: 314 KLKYGELNKLERILKEKSQKDI-QLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIV 372
           +L+YG+L +LE  LK  +Q +  +      +  LL+T+VG+EEIAE++SR TGIPV++++
Sbjct: 500 ELQYGKLPELEAQLKRVAQAEAGRTAQPEARARLLRTQVGAEEIAEVISRATGIPVARMM 559

Query: 373 QVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKT 432
           Q EREKL+ IE  L +RVV QDEAI AV+NAIRRSR+GL+D  RPYGSF+FLGPTGVGKT
Sbjct: 560 QGEREKLMQIEAKLHERVVAQDEAIDAVANAIRRSRAGLADPNRPYGSFLFLGPTGVGKT 619

Query: 433 ELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYS 492
           ELCK L+A +F +E  +IRIDMSEF EKHS++RLIGAPPGY+GYEEGGYLTE VRR PYS
Sbjct: 620 ELCKALAAFLFGDETHLIRIDMSEFGEKHSVARLIGAPPGYVGYEEGGYLTETVRRTPYS 679

Query: 493 LILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGD 552
           +ILLDEIEKA++++FN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLG+  I+ M    
Sbjct: 680 VILLDEIEKAHAEIFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGAHLIQSMIGEP 739

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
           ++ ++ AV NEV+  F+PEF+NRID+++VF  L+R NI SIA IQL  L  +L K++M L
Sbjct: 740 RDAMREAVWNEVRQSFKPEFLNRIDEVVVFDALDRSNIESIARIQLGRLAERLSKLDMQL 799

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS AAL +I +IG+D  +GAR
Sbjct: 800 DISDAALAQIGSIGYDPSFGAR 821


>gi|15677326|ref|NP_274481.1| clpB protein [Neisseria meningitidis MC58]
 gi|385852913|ref|YP_005899427.1| ATP-dependent chaperone ClpB [Neisseria meningitidis H44/76]
 gi|416196159|ref|ZP_11618005.1| ATP-dependent chaperone ClpB [Neisseria meningitidis CU385]
 gi|427827581|ref|ZP_18994613.1| ATP-dependent chaperone ClpB [Neisseria meningitidis H44/76]
 gi|433465416|ref|ZP_20422896.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM422]
 gi|433488751|ref|ZP_20445909.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
           M13255]
 gi|433490817|ref|ZP_20447936.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM418]
 gi|433505322|ref|ZP_20462260.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 9506]
 gi|54035905|sp|Q9JYQ8.1|CLPB_NEIMB RecName: Full=Chaperone protein ClpB
 gi|7226713|gb|AAF41829.1| clpB protein [Neisseria meningitidis MC58]
 gi|316984618|gb|EFV63583.1| ATP-dependent chaperone ClpB [Neisseria meningitidis H44/76]
 gi|325140588|gb|EGC63108.1| ATP-dependent chaperone ClpB [Neisseria meningitidis CU385]
 gi|325199917|gb|ADY95372.1| ATP-dependent chaperone ClpB [Neisseria meningitidis H44/76]
 gi|432202500|gb|ELK58562.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM422]
 gi|432222617|gb|ELK78408.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
           M13255]
 gi|432226583|gb|ELK82309.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM418]
 gi|432240614|gb|ELK96148.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 9506]
          Length = 859

 Score =  831 bits (2147), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/621 (62%), Positives = 514/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI +IA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLA 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|292492354|ref|YP_003527793.1| ATP-dependent chaperone ClpB [Nitrosococcus halophilus Nc4]
 gi|291580949|gb|ADE15406.1| ATP-dependent chaperone ClpB [Nitrosococcus halophilus Nc4]
          Length = 865

 Score =  831 bits (2147), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/622 (63%), Positives = 509/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP  L  +++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNSEVPEGLKHRRLLALDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+IS  + +II+FIDELHT++G GK EG++DA NMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLKDISKAEGNIILFIDELHTVVGAGKAEGAMDASNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL ++YEVHHGVEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSLEDTIAILRGLNERYEVHHGVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE MD++ERRL+QLKIE EA+++E DE+SKK
Sbjct: 380 YITDRKLPDKAIDLIDEAASRIRMEIDSKPEPMDRMERRLVQLKIEREALRKETDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EIN LE +YA+LE+IWK EK  +  +Q IKE++E+ RL+++ A R  D   +S
Sbjct: 440 RLETLETEINHLEKEYADLEEIWKAEKAALSGAQGIKEKLEQARLELDSARRAGDLTRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +L++      Q D         F LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGQIPELQK------QLDAATAAEQQDFKLLRNKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RVVGQ+EAI  VSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLKMEEALHRRVVGQEEAIEVVSNAIRRSRAGLADPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+A +F+ EE+++RIDMSEF+E+HS++RLIGAPPGY+G+EEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAAFLFDTEEAMVRIDMSEFMERHSVARLIGAPPGYVGFEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD  GRT++FRNT++VMTSNLGS  I+EM   + 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGHGRTVDFRNTVVVMTSNLGSHVIQEMAGEEH 733

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K AVM  V  +FRPEFINR+DD++VF  L +  I +IA +Q+  L+ +L + +MDL
Sbjct: 734 YQEMKNAVMEIVGQHFRPEFINRVDDVVVFHPLLKGQIRAIAKLQIGHLQQRLRERDMDL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +S+ AL K++ +GFD +YGAR
Sbjct: 794 AVSETALDKLAEVGFDPVYGAR 815


>gi|54294637|ref|YP_127052.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
           pneumophila str. Lens]
 gi|53754469|emb|CAH15953.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
           pneumophila str. Lens]
          Length = 858

 Score =  831 bits (2146), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/622 (63%), Positives = 513/622 (82%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPA+VAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPALVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE MDKLERRLIQLKIE EA+K+E DE+SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAASLIRMEIDSKPESMDKLERRLIQLKIEREALKKENDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL+ ++K I++LE  Y++LE+IWK EK  ++ S QIKE +E+ +L++  A R  D   +S
Sbjct: 440 RLVDLQKSIDELEQNYSDLEEIWKAEKATMQGSTQIKEALEQAKLEMETARRAGDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L + S  D      A +  L++ KV  +EIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKRLSQVSSVD------AMETKLVRNKVTEDEIAEVVSKWTGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L  R++GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLKMEEALHSRLIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGD 552
           ILLDE+EKA++DVFNILLQ++DDGRLTD +GRT++FRNT+IVMTSNLGS  I+EM  K +
Sbjct: 674 ILLDEVEKAHTDVFNILLQVMDDGRLTDGQGRTVDFRNTVIVMTSNLGSQLIQEMSSKFN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK AVM+ V  +FRPEFINRID+ +VF  L ++ I  IA IQ+N L ++L + N+ L
Sbjct: 734 YDEIKAAVMDLVSQHFRPEFINRIDESVVFHSLTKEQIAKIAAIQINYLHHRLKQQNITL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +++  AL  ++  GFD +YGAR
Sbjct: 794 EVTSEALSHLAEAGFDPVYGAR 815


>gi|77165844|ref|YP_344369.1| ATP-dependent Clp protease [Nitrosococcus oceani ATCC 19707]
 gi|254434018|ref|ZP_05047526.1| ATPase, AAA family [Nitrosococcus oceani AFC27]
 gi|76884158|gb|ABA58839.1| ATP-dependent Clp protease [Nitrosococcus oceani ATCC 19707]
 gi|207090351|gb|EDZ67622.1| ATPase, AAA family [Nitrosococcus oceani AFC27]
          Length = 865

 Score =  830 bits (2145), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/622 (62%), Positives = 506/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIIN EVP  L ++++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINSEVPEGLKNRRLLALDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+IS  + +II+FIDELHT++G GK EG++DA NMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLKDISKAEGNIILFIDELHTVVGAGKAEGAMDASNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP++E+TI+ILRGL ++YEVHHGVEITDPAIVAA+ LS+R
Sbjct: 320 RRYIEKDAALERRFQKVLVDEPNVEDTIAILRGLSERYEVHHGVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDE+A++I++EIDSKPE MD+LERRLIQLKIE EA++RE DE+S++
Sbjct: 380 YITDRKLPDKAIDLIDESASRIRMEIDSKPEPMDRLERRLIQLKIEREALRRETDEASRR 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ E+N+LE +YA+LE+IWK EK  +  +Q IKE++E+ RL +  A R  D   +S
Sbjct: 440 RLETLETELNQLEKEYADLEEIWKAEKATLSGAQGIKEQLEQARLDLESAHRAGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++      Q D         F LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELQK------QLDAATAVEQQDFKLLRNKVSEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RVVGQDEA++ VSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEAALHQRVVGQDEAVAVVSNAIRRSRAGLADPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+A +F+ EE+++RIDMSEF+E+HS++RLIGAPPGY+G+EEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAAFLFDTEEAMVRIDMSEFMERHSVARLIGAPPGYVGFEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD  GRT++FRNT++VMTSNLGS  I+EM   D+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGHGRTVDFRNTVVVMTSNLGSHVIQEMAGEDR 733

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K AVM  V  +FRPEFINR+DD++VF  L +  + +IA IQ+  L+ +L +  M L
Sbjct: 734 YQEMKSAVMEIVGQHFRPEFINRVDDVVVFHPLQKAQLQAIAQIQIGYLQQRLAQREMVL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            I + AL K++  GFD +YGAR
Sbjct: 794 TIPEEALSKLAEAGFDPVYGAR 815


>gi|397667476|ref|YP_006509013.1| protein disaggregation chaperone [Legionella pneumophila subsp.
           pneumophila]
 gi|395130887|emb|CCD09136.1| protein disaggregation chaperone [Legionella pneumophila subsp.
           pneumophila]
          Length = 858

 Score =  830 bits (2145), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/622 (63%), Positives = 513/622 (82%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPA+VAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPALVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE MDKLERRLIQLKIE EA+K+E DE+SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAASLIRMEIDSKPESMDKLERRLIQLKIEREALKKENDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL+ ++K I++LE  Y++LE+IWK EK  ++ S QIKE +E+ +L++  A R  D   +S
Sbjct: 440 RLVDLQKSIDELEQNYSDLEEIWKAEKATMQGSTQIKEALEQAKLEMETARRAGDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L + S  D      A +  L++ KV  +EIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKRLSQVSSVD------AMETKLVRNKVTEDEIAEVVSKWTGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L  R++GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLKMEEALHSRLIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGD 552
           ILLDE+EKA++DVFNILLQ++DDGRLTD +GRT++FRNT+IVMTSNLGS  I+EM  K +
Sbjct: 674 ILLDEVEKAHTDVFNILLQVMDDGRLTDGQGRTVDFRNTVIVMTSNLGSQLIQEMSSKFN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK AVM+ V  +FRPEFINRID+ +VF  L ++ I  IA IQ+N L ++L + N+ L
Sbjct: 734 YDEIKAAVMDLVSQHFRPEFINRIDESVVFHSLTKEQIAKIAAIQINYLHHRLKQQNITL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +++  AL  ++  GFD +YGAR
Sbjct: 794 EVTSEALSHLAEAGFDPVYGAR 815


>gi|54297663|ref|YP_124032.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
           pneumophila str. Paris]
 gi|296107341|ref|YP_003619041.1| ATP-dependent Clp protease [Legionella pneumophila 2300/99 Alcoy]
 gi|53751448|emb|CAH12866.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
           pneumophila str. Paris]
 gi|295649242|gb|ADG25089.1| ATP-dependent Clp protease [Legionella pneumophila 2300/99 Alcoy]
 gi|307610448|emb|CBX00019.1| endopeptidase Clp ATP-binding chain B [Legionella pneumophila 130b]
          Length = 858

 Score =  830 bits (2145), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/622 (63%), Positives = 513/622 (82%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPA+VAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPALVAAAMLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE MDKLERRLIQLKIE EA+K+E DE+SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAASLIRMEIDSKPESMDKLERRLIQLKIEREALKKENDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL+ ++K I++LE  Y++LE+IWK EK  ++ S QIKE +E+ +L++  A R  D   +S
Sbjct: 440 RLVDLQKSIDELEQNYSDLEEIWKAEKATMQGSTQIKEALEQAKLEMETARRAGDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L + S  D      A +  L++ KV  +EIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKRLSQVSSVD------AMETKLVRNKVTEDEIAEVVSKWTGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L  R++GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLKMEEALHSRLIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGD 552
           ILLDE+EKA++DVFNILLQ++DDGRLTD +GRT++FRNT+IVMTSNLGS  I+EM  K +
Sbjct: 674 ILLDEVEKAHTDVFNILLQVMDDGRLTDGQGRTVDFRNTVIVMTSNLGSQLIQEMSSKFN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK AVM+ V  +FRPEFINRID+ +VF  L ++ I  IA IQ+N L ++L + N+ L
Sbjct: 734 YDEIKAAVMDLVSQHFRPEFINRIDESVVFHSLTKEQIAKIAAIQINYLHHRLKQQNITL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +++  AL  ++  GFD +YGAR
Sbjct: 794 EVTSEALSHLAEAGFDPVYGAR 815


>gi|416177443|ref|ZP_11610041.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M6190]
 gi|416192482|ref|ZP_11616664.1| ATP-dependent chaperone ClpB [Neisseria meningitidis ES14902]
 gi|433492869|ref|ZP_20449958.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM586]
 gi|433502337|ref|ZP_20459307.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM126]
 gi|325132627|gb|EGC55316.1| ATP-dependent chaperone ClpB [Neisseria meningitidis M6190]
 gi|325138148|gb|EGC60721.1| ATP-dependent chaperone ClpB [Neisseria meningitidis ES14902]
 gi|432227164|gb|ELK82875.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM586]
 gi|432243011|gb|ELK98526.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis NM126]
          Length = 859

 Score =  830 bits (2145), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/623 (62%), Positives = 514/623 (82%), Gaps = 6/623 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVENTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLE--RILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           KL Y +L  LE  R   E++  D   P N     LL+  VG+EEIAE+VSR TGIPVSK+
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPAN----KLLRNNVGAEEIAEVVSRMTGIPVSKM 555

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGK
Sbjct: 556 MEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGK 615

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPY
Sbjct: 616 TELCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPY 675

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           S+ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   
Sbjct: 676 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQ 735

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E +K  VM +VK +FRPE INRID+++VF  L++ NI +IA IQL  L+ +L K N+ 
Sbjct: 736 DYEAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLR 795

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +S AAL  I+  GFD IYGAR
Sbjct: 796 LTVSDAALDIIAKAGFDPIYGAR 818


>gi|421555123|ref|ZP_16001060.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 98008]
 gi|402331402|gb|EJU66739.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 98008]
          Length = 859

 Score =  830 bits (2145), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/621 (62%), Positives = 514/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ LE +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEIDGLEKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI +IA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLT 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|421560632|ref|ZP_16006488.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
           NM2657]
 gi|254669474|emb|CBA03362.1| ATP-dependent protease, ATPase subunit [Neisseria meningitidis
           alpha153]
 gi|402339801|gb|EJU75010.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
           NM2657]
          Length = 859

 Score =  830 bits (2144), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/621 (62%), Positives = 514/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+L+ EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLLGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI +IA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLT 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|397664204|ref|YP_006505742.1| protein disaggregation chaperone [Legionella pneumophila subsp.
           pneumophila]
 gi|395127615|emb|CCD05814.1| protein disaggregation chaperone [Legionella pneumophila subsp.
           pneumophila]
          Length = 858

 Score =  830 bits (2144), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/622 (63%), Positives = 512/622 (82%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPA+VAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPALVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE MDKLERRLIQLKIE EA+K+E DE+SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAASLIRMEIDSKPESMDKLERRLIQLKIEREALKKENDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL+ ++K I++LE  Y++LE+IWK EK  ++ S QIKE +E+ +L++  A R  D   +S
Sbjct: 440 RLVDLQKSIDELEQSYSDLEEIWKAEKATMQGSTQIKEALEQAKLEMETARRAGDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L + S  D      A +  L++ KV  +EIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKRLSQVSSVD------AMETKLVRNKVTEDEIAEVVSKWTGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L  R++GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLKMEEALHSRLIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGD 552
           ILLDE+EKA++DVFNILLQ++DDGRLTD +GRT++FRNT+IVMTSNLGS  I+EM  K +
Sbjct: 674 ILLDEVEKAHTDVFNILLQVMDDGRLTDGQGRTVDFRNTVIVMTSNLGSQLIQEMSSKFN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              IK AVM+ V  +FRPEFINRID+ +VF  L ++ I  IA IQ+N L ++L + N+ L
Sbjct: 734 YNEIKAAVMDLVSQHFRPEFINRIDESVVFHSLTKEQIAKIAAIQINYLHHRLKQQNITL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +++  AL  ++  GFD +YGAR
Sbjct: 794 EVTSEALSHLAEAGFDPVYGAR 815


>gi|421556851|ref|ZP_16002761.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 80179]
 gi|402336105|gb|EJU71367.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 80179]
          Length = 859

 Score =  830 bits (2144), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/621 (62%), Positives = 513/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L + VVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRSVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI +IA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLT 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|385340361|ref|YP_005894233.1| ATP-dependent chaperone ClpB [Neisseria meningitidis G2136]
 gi|421566948|ref|ZP_16012689.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
           NM3001]
 gi|433467617|ref|ZP_20425070.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 87255]
 gi|325198605|gb|ADY94061.1| ATP-dependent chaperone ClpB [Neisseria meningitidis G2136]
 gi|389605380|emb|CCA44298.1| chaperone protein clpB [Neisseria meningitidis alpha522]
 gi|402344891|gb|EJU80024.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
           NM3001]
 gi|432202038|gb|ELK58106.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 87255]
          Length = 859

 Score =  830 bits (2144), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/621 (62%), Positives = 514/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ LE +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEIDGLEKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI +IA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLT 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|52841977|ref|YP_095776.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|378777611|ref|YP_005186049.1| ClpB protein [Legionella pneumophila subsp. pneumophila ATCC 43290]
 gi|52629088|gb|AAU27829.1| ClpB protein [Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1]
 gi|364508426|gb|AEW51950.1| ClpB protein [Legionella pneumophila subsp. pneumophila ATCC 43290]
          Length = 858

 Score =  830 bits (2144), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/622 (63%), Positives = 513/622 (82%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPA+VAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPALVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE MDKLERRLIQLKIE EA+K+E DE+SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAASLIRMEIDSKPESMDKLERRLIQLKIEREALKKENDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL+ ++K I++LE  Y++LE+IWK EK  ++ S QIKE +E+ +L++  A R  D   +S
Sbjct: 440 RLVDLQKSIDELEQNYSDLEEIWKAEKATMQGSTQIKEALEQAKLEMETARRAGDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L + S  D      A +  L++ KV  +EIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKRLSQVSSVD------AMETKLVRNKVTEDEIAEVVSKWTGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L  R++GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLKMEEALHSRLIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGD 552
           ILLDE+EKA++DVFNILLQ++DDGRLTD +GRT++FRNT+IVMTSNLGS  I+EM  K +
Sbjct: 674 ILLDEVEKAHTDVFNILLQVMDDGRLTDGQGRTVDFRNTVIVMTSNLGSQLIQEMSSKFN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK AVM+ V  +FRPEFINRID+ +VF  L ++ I  IA IQ+N L ++L + N+ +
Sbjct: 734 YDEIKAAVMDLVSQHFRPEFINRIDESVVFHSLTKEQIAKIAAIQINYLHHRLKQQNITI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +++  AL  ++  GFD +YGAR
Sbjct: 794 EVTSEALSHLAEAGFDPVYGAR 815


>gi|59801418|ref|YP_208130.1| ClpB protein [Neisseria gonorrhoeae FA 1090]
 gi|268686347|ref|ZP_06153209.1| ClpB protein [Neisseria gonorrhoeae SK-93-1035]
 gi|293399276|ref|ZP_06643441.1| ATP-dependent chaperone ClpB [Neisseria gonorrhoeae F62]
 gi|59718313|gb|AAW89718.1| putative ClpB protein [Neisseria gonorrhoeae FA 1090]
 gi|268626631|gb|EEZ59031.1| ClpB protein [Neisseria gonorrhoeae SK-93-1035]
 gi|291610690|gb|EFF39800.1| ATP-dependent chaperone ClpB [Neisseria gonorrhoeae F62]
          Length = 859

 Score =  830 bits (2144), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/621 (62%), Positives = 514/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEIDGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQ+EA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLT 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|148359294|ref|YP_001250501.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
           pneumophila str. Corby]
 gi|148281067|gb|ABQ55155.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
           pneumophila str. Corby]
          Length = 858

 Score =  830 bits (2143), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/622 (63%), Positives = 513/622 (82%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPA+VAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPALVAAAMLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE MDKLERRLIQLKIE EA+K+E DE+SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAASLIRMEIDSKPESMDKLERRLIQLKIEREALKKENDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL+ ++K I++LE  Y++LE+IWK EK  ++ S QIKE +E+ +L++  A R  D   +S
Sbjct: 440 RLVDLQKSIDELEQNYSDLEEIWKAEKATMQGSTQIKEALEQAKLEMETARRAGDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L + S  D      A +  L++ KV  +EIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKRLSQVSSVD------AMETKLVRNKVTEDEIAEVVSKWTGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L  R++GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLKMEEALHSRLIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGD 552
           +LLDE+EKA++DVFNILLQ++DDGRLTD +GRT++FRNT+IVMTSNLGS  I+EM  K +
Sbjct: 674 VLLDEVEKAHTDVFNILLQVMDDGRLTDGQGRTVDFRNTVIVMTSNLGSQLIQEMSSKFN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK AVM+ V  +FRPEFINRID+ +VF  L ++ I  IA IQ+N L ++L + N+ L
Sbjct: 734 YDEIKAAVMDLVSQHFRPEFINRIDESVVFHSLAKEQIAKIAAIQINYLHHRLKQQNITL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +++  AL  ++  GFD +YGAR
Sbjct: 794 EVTNEALSHLAEAGFDPVYGAR 815


>gi|194098306|ref|YP_002001364.1| putative ClpB protein [Neisseria gonorrhoeae NCCP11945]
 gi|268594573|ref|ZP_06128740.1| chaperone clpB [Neisseria gonorrhoeae 35/02]
 gi|385335472|ref|YP_005889419.1| putative ClpB protein [Neisseria gonorrhoeae TCDC-NG08107]
 gi|193933596|gb|ACF29420.1| putative ClpB protein [Neisseria gonorrhoeae NCCP11945]
 gi|268547962|gb|EEZ43380.1| chaperone clpB [Neisseria gonorrhoeae 35/02]
 gi|317164015|gb|ADV07556.1| putative ClpB protein [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 859

 Score =  829 bits (2142), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/621 (62%), Positives = 514/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEIDGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG++E+AEIVSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGADEVAEIVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQ+EA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLT 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|416160735|ref|ZP_11606242.1| ATP-dependent chaperone ClpB [Neisseria meningitidis N1568]
 gi|433473860|ref|ZP_20431219.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 97021]
 gi|433482370|ref|ZP_20439628.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
           2006087]
 gi|433484407|ref|ZP_20441630.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
           2002038]
 gi|433486678|ref|ZP_20443870.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 97014]
 gi|325128567|gb|EGC51440.1| ATP-dependent chaperone ClpB [Neisseria meningitidis N1568]
 gi|432208789|gb|ELK64761.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 97021]
 gi|432215090|gb|ELK70980.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
           2006087]
 gi|432220101|gb|ELK75927.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
           2002038]
 gi|432221197|gb|ELK77010.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 97014]
          Length = 859

 Score =  829 bits (2141), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/623 (62%), Positives = 514/623 (82%), Gaps = 6/623 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLE--RILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           KL Y +L  LE  R   E++  D   P N     LL+  VG+EEIAE+VSR TGIPVSK+
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPAN----KLLRNNVGAEEIAEVVSRMTGIPVSKM 555

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGK
Sbjct: 556 MEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGK 615

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEG YLTE VRRKPY
Sbjct: 616 TELCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGSYLTEQVRRKPY 675

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           S+ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   
Sbjct: 676 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQ 735

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E +K  VM +VK +FRPE INRID+++VF  L++ NI +IA IQL  L+ +L K N+ 
Sbjct: 736 DYEAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLR 795

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +S AAL  I+  GFD IYGAR
Sbjct: 796 LTVSDAALDIIAKAGFDPIYGAR 818


>gi|399117309|emb|CCG20123.1| chaperone protein ClpB [Taylorella asinigenitalis 14/45]
          Length = 856

 Score =  828 bits (2140), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/621 (63%), Positives = 514/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP SL  K++L LD+A LLAG K+RGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPESLRGKRVLSLDMASLLAGAKFRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++ ++ + I+FIDE+HTM+G G  EG+IDAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 259 KAVLKELAQDEGNNIVFIDEIHTMVGAGGAEGAIDAGNMLKPALSRGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+L++EPD+E TI+ILRGL+++YE+HHGVEITDPAIVAA+ELS R
Sbjct: 319 RKYIEKDAALERRFQKVLIDEPDVEATIAILRGLKERYEIHHGVEITDPAIVAAAELSNR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+I++EIDSKPE+MD+L+RR+IQLKIE EA++RE DE+SK+
Sbjct: 379 YITDRFLPDKAIDLIDEAAARIRMEIDSKPEVMDRLDRRIIQLKIEREAVRREDDEASKR 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI+ E+ KL+ +Y + E+IWK EK+ +   Q I+E+I+KV+ ++ +  R+ +++ +S
Sbjct: 439 RLQLIEDELAKLQREYDDYEQIWKAEKSSVHGVQSIREDIDKVKAQMAEYQRQGEYEKLS 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L  LE  LK   + ++       K  LL+T+VG+EEIAE+VSR TGIPV+K++Q
Sbjct: 499 ELQYGKLPDLELRLKSAEKGEV-------KNQLLRTEVGTEEIAEVVSRATGIPVAKMMQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER KLL +E+ L +RVVGQDEA+  VS+AIRRSR+GLSD  +PYGSF+FLGPTGVGKTE
Sbjct: 552 GERAKLLTMEDRLHERVVGQDEAVRLVSDAIRRSRAGLSDPSKPYGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++ ++RIDMSEF+EKH+++RLIGAPPGYIGYEEGGYLTE +RRKPYS+
Sbjct: 612 LTKALANFLFDSDDHMVRIDMSEFMEKHTVARLIGAPPGYIGYEEGGYLTEAIRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSN+GS  I++M     
Sbjct: 672 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNIGSQHIQKMSGEPY 731

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK  V +E+K  FRPEF+NRID+I+VF  L +  I +IA IQ+  L  +L +  M L+
Sbjct: 732 EKIKDVVWDELKNSFRPEFLNRIDEIVVFHGLEQDQIANIAKIQIKRLAQRLGQFEMKLE 791

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           IS  A+ KI+  GFD ++GAR
Sbjct: 792 ISDEAIAKIAEAGFDPVFGAR 812


>gi|268684092|ref|ZP_06150954.1| ClpB protein [Neisseria gonorrhoeae SK-92-679]
 gi|268624376|gb|EEZ56776.1| ClpB protein [Neisseria gonorrhoeae SK-92-679]
          Length = 859

 Score =  828 bits (2139), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/621 (62%), Positives = 514/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEIDGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQ+EA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKP+S+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPHSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLT 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|422348530|ref|ZP_16429423.1| chaperone ClpB [Sutterella wadsworthensis 2_1_59BFAA]
 gi|404659231|gb|EKB32085.1| chaperone ClpB [Sutterella wadsworthensis 2_1_59BFAA]
          Length = 864

 Score =  828 bits (2139), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/620 (62%), Positives = 513/620 (82%), Gaps = 3/620 (0%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTA+VEGLAQRI+N EVP+SL  K+IL LD+A L+AG KYRGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAVVEGLAQRIVNNEVPDSLRGKRILSLDMAGLIAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
           K+LKE++     II+FIDELHT++G GK EGS+DAGNMLKP LSRGELH IGATTL+EYR
Sbjct: 261 KLLKEVTAESGRIILFIDELHTVVGAGKTEGSMDAGNMLKPALSRGELHVIGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           +Y+EKDAA ERRFQK+LV+EP +E+TI+ILRGLQ++YE HHGVEITDPAIVAA+ELS+RY
Sbjct: 321 KYVEKDAALERRFQKVLVDEPSVEDTIAILRGLQERYEAHHGVEITDPAIVAAAELSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DRF+PDKAIDLIDEAAA++K+EIDSKPE +DKL+RRLIQLKIE EA+K+E D++SKKR
Sbjct: 381 ITDRFLPDKAIDLIDEAAARVKMEIDSKPEALDKLDRRLIQLKIEREAMKKETDDASKKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L  I+ EI+KL  +YA+LE++WK EK+    ++ +++EI++ R ++ +  R + ++ +++
Sbjct: 441 LQAIEDEIDKLSREYADLEEVWKKEKSEALGAKSVRDEIDRTRHQMEEYRRTAQYEKLAE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+Y  L KLE  LK+  + +     +A K  LL+T VG+EEIAE+VSR TGIPV+K+++ 
Sbjct: 501 LQYAVLPKLEERLKKAEKAE---AGDAPKPKLLRTTVGAEEIAEVVSRATGIPVAKMMEG 557

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           ER+KLL++++ L +RVVGQDEA+  V+  I RSR+GLSD  RPYGSF+FLGPTGVGKTEL
Sbjct: 558 ERQKLLHMKDALEERVVGQDEAVKRVAETILRSRAGLSDPNRPYGSFLFLGPTGVGKTEL 617

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
            K L+  +F+ E++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR PYS+I
Sbjct: 618 TKALAQFLFDTEDALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRHPYSVI 677

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDE+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLGS +I+EM    +E
Sbjct: 678 LLDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGSSEIQEMIGESRE 737

Query: 555 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 614
            +K AVM EV+ +FRPEFINRID+I++F  L  + I  IA IQL  L+ ++   ++ L++
Sbjct: 738 SVKNAVMTEVREHFRPEFINRIDEIVIFNSLGSEAIRRIAAIQLKSLQARVAAQDVTLEV 797

Query: 615 SKAALKKISNIGFDLIYGAR 634
           +  A+ +++ +GFD  YGAR
Sbjct: 798 TDEAMAELAEVGFDPHYGAR 817


>gi|421538432|ref|ZP_15984608.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 93003]
 gi|402316459|gb|EJU52004.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 93003]
          Length = 859

 Score =  828 bits (2139), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/623 (62%), Positives = 514/623 (82%), Gaps = 6/623 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLE--RILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           KL Y +L  LE  R   E++  D   P N     LL+  VG+EEIAE+VSR TGIPVSK+
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPAN----KLLRNNVGAEEIAEVVSRMTGIPVSKM 555

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLG TGVGK
Sbjct: 556 MEGERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGSTGVGK 615

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPY
Sbjct: 616 TELCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPY 675

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           S+ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   
Sbjct: 676 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQ 735

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E +K  VM +VK +FRPE INRID+++VF  L++ NI +IA IQL  L+ +L K N+ 
Sbjct: 736 DYEAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLR 795

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +S AAL  I+  GFD IYGAR
Sbjct: 796 LTVSDAALDIIAKAGFDPIYGAR 818


>gi|268598720|ref|ZP_06132887.1| ClpB protein [Neisseria gonorrhoeae MS11]
 gi|268582851|gb|EEZ47527.1| ClpB protein [Neisseria gonorrhoeae MS11]
          Length = 859

 Score =  828 bits (2139), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/621 (62%), Positives = 514/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPTLARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEIDGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQ+EA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKP+S+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPHSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLT 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|421559550|ref|ZP_16005423.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 92045]
 gi|402335349|gb|EJU70615.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 92045]
          Length = 859

 Score =  828 bits (2138), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/621 (62%), Positives = 513/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLG TGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGSTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI +IA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLA 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|407697521|ref|YP_006822309.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
           dieselolei B5]
 gi|407254859|gb|AFT71966.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
           dieselolei B5]
          Length = 861

 Score =  827 bits (2136), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/622 (61%), Positives = 507/622 (81%), Gaps = 4/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKEKRVLSLDMAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KAVLNELSKQEGRVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGV+ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVDITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDS PE MD+L+RRLIQLK+E EA+++E DE+S+K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSMPEEMDRLDRRLIQLKMEREALRKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I  LE +YA+LE+IW  EK  ++ +QQ K E+E+ R+ + +A R  D   +S
Sbjct: 440 RLEKLEADIAALEKEYADLEEIWNAEKAALQGAQQYKAELEQARVDMEQARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ +++  +++        +  LL+ KV  EE+AE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPELEKKVQQAQERE---EAAQVETQLLRNKVTDEEVAEVVSKWTGIPVSKMLE 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 557 GEREKLLRMEEALHHRVVGQDEAVEAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LCKALAGFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           +LLDE+EKA+ DVFN+LLQ+L+DGRLTD +GRT++FRNT++VMTSNLGSD I+ M  +GD
Sbjct: 677 LLLDEVEKAHPDVFNVLLQVLEDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQRMAGEGD 736

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E +K AVM  V  +FRPEFINR+D+ +VF  L +  +  IA IQL+ L+ +L+   M L
Sbjct: 737 YEAMKAAVMEVVGQHFRPEFINRVDETVVFHPLGQAQLKGIAGIQLDYLRKRLVDREMSL 796

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +S AAL K+   GFD +YGAR
Sbjct: 797 TLSDAALDKLVEAGFDPVYGAR 818


>gi|357406325|ref|YP_004918249.1| Chaperone protein ClpB [Methylomicrobium alcaliphilum 20Z]
 gi|351718990|emb|CCE24664.1| Chaperone protein ClpB [Methylomicrobium alcaliphilum 20Z]
          Length = 859

 Score =  827 bits (2136), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/622 (62%), Positives = 509/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  +  K++L LD+A L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKGKQLLSLDMAALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+  Q  +I+F+DELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDIAKQQGQVILFVDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP++E+TI+ILRGL++KYEVHHGV+ITDPAIVAA+ LS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPNVEDTIAILRGLKEKYEVHHGVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDL+DEAA++I++EIDSKPE MD+L+RRLIQLKIE EA+K E DE+SKK
Sbjct: 380 YISDRQLPDKAIDLVDEAASRIRMEIDSKPEAMDRLDRRLIQLKIEREALKNETDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++ I  LE +Y+  ++IWK EK  ++ +  IKE +E+ RL++  A+R +D   +S
Sbjct: 440 RLESLEEAIENLEKEYSEFDEIWKAEKAALQGTTAIKERLEQARLELEVASRANDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  L + L   SQ ++Q      +  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPSLVKELDLASQAEMQ------EMKLLRNKVTDEEIAEVVSKWTGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  + KRVVGQ EA+ +VSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEEQIQKRVVGQTEALISVSNAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRN ++VMTSNLGSD+I+E+   + 
Sbjct: 674 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNAVVVMTSNLGSDRIQELAGEEN 733

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K AVM  V  +FRPEFINRIDD++VF  L R  I SI +IQ+  L+ +LL  ++DL
Sbjct: 734 YAAMKSAVMEVVGYHFRPEFINRIDDVVVFHPLGRDQIRSITDIQIRYLRKRLLDHDIDL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S+AAL K+   GFD +YGAR
Sbjct: 794 ELSEAALDKLGEAGFDPVYGAR 815


>gi|433537418|ref|ZP_20493913.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 77221]
 gi|432271183|gb|ELL26309.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 77221]
          Length = 859

 Score =  827 bits (2135), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/621 (62%), Positives = 512/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDEA+ AVS+AIRRSRSGL+D  +PYGSF+FLG TGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQDEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGSTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L   ++ LK
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQSNIRSIAKIQLKGLEKRLEAQHLHLK 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +  AAL  I+  GFD +YGAR
Sbjct: 798 VDDAALDLIAKAGFDPVYGAR 818


>gi|385338300|ref|YP_005892173.1| chaperone ClpB (short) [Neisseria meningitidis WUE 2594]
 gi|433475890|ref|ZP_20433227.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 88050]
 gi|433517864|ref|ZP_20474607.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 96023]
 gi|433524413|ref|ZP_20481071.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 97020]
 gi|319410714|emb|CBY91096.1| chaperone ClpB (short) [Neisseria meningitidis WUE 2594]
 gi|432208999|gb|ELK64970.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 88050]
 gi|432252608|gb|ELL07960.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 96023]
 gi|432258640|gb|ELL13921.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis 97020]
          Length = 859

 Score =  826 bits (2134), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/621 (62%), Positives = 512/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDE + AVS+AIRRSRSGL+D  +PYGSF+FLG TGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQDETVRAVSDAIRRSRSGLADPNKPYGSFLFLGSTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI +IA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLT 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|424776135|ref|ZP_18203120.1| ATP-dependent protease, ATPase subunit [Alcaligenes sp. HPC1271]
 gi|422888595|gb|EKU30981.1| ATP-dependent protease, ATPase subunit [Alcaligenes sp. HPC1271]
          Length = 863

 Score =  825 bits (2132), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 410/660 (62%), Positives = 533/660 (80%), Gaps = 13/660 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP +L  K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNNEVPETLKGKRVLVLDLAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S +    I+FIDELHTM+G GK EG++DAGNMLKP LSRGELHCIGATTLNEY
Sbjct: 260 KAVLKELSKDDGKTIVFIDELHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EPD+E TI+ILRGLQ++YE+HHGV ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVNEPDMESTIAILRGLQERYELHHGVAITDPAIVAAAELSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+I++EIDSKPE+MDKL+RR+IQLKIE EA+ ++ DE+S++
Sbjct: 380 YITDRFLPDKAIDLIDEAAARIRMEIDSKPEVMDKLDRRIIQLKIEREAVIKDTDEASQR 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  I  E+ KL+ +Y + E+IWK EK  ++ SQ +KEEIEKVR ++ +  RK  +  ++
Sbjct: 440 RLQAINDEMEKLQREYNDYEEIWKAEKAAVQGSQVVKEEIEKVRAEMAELQRKGQFDKLA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK  ++ ++   +  +K  LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 500 ELQYGKLPELEERLK-AAEANMDKADQ-DKPRLLRTQVGAEEIAEVVSRATGIPVSKMMQ 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L KRVVGQ EA+  VS+AIRRSR+GLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 558 GEREKLLQMEDYLHKRVVGQGEAVRLVSDAIRRSRAGLSDPSRPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LTKALANFLFDSEDHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGS  I+ +     
Sbjct: 678 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSQHIQRLSGEPY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           ++IK  V  EVK +FRPEF+NRID+++VF  L  ++I SIA IQL  L  +L + +M L+
Sbjct: 738 DVIKEVVWEEVKQHFRPEFLNRIDEVVVFHGLEAEHIESIARIQLERLDQRLAQRDMHLE 797

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
           +S+AAL +++  GFD ++GAR +   K+++     + H ++P A  I  G     GP+ +
Sbjct: 798 VSEAALAQLAKAGFDPVFGARPL---KRAI-----QQHIENPVARLILEGRF---GPKDV 846


>gi|408415770|ref|YP_006626477.1| ATP-dependent protease, ATPase subunit [Bordetella pertussis 18323]
 gi|410419648|ref|YP_006900097.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
           MO149]
 gi|412338419|ref|YP_006967174.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
           253]
 gi|427821419|ref|ZP_18988482.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
           D445]
 gi|427823388|ref|ZP_18990450.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
           Bbr77]
 gi|401777940|emb|CCJ63301.1| ATP-dependent protease, ATPase subunit [Bordetella pertussis 18323]
 gi|408446943|emb|CCJ58614.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
           MO149]
 gi|408768253|emb|CCJ53014.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
           253]
 gi|410572419|emb|CCN20695.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
           D445]
 gi|410588653|emb|CCN03713.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
           Bbr77]
          Length = 865

 Score =  825 bits (2132), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/622 (63%), Positives = 516/622 (82%), Gaps = 1/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP +L  K++L LD+A LLAG K+RGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++ +    I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLKELAQDDGQNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVGEPDVESTIAILRGLQERYELHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEA A+I++EIDSKPE+MD+L+RR+IQLKIE EA+K+E D++S +
Sbjct: 379 YITDRFLPDKAIDLIDEAGARIRMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDDASMR 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I++E+ KL+ +Y + E+IWK EK  ++ +Q IKEEI++VR ++ +  RK  +  ++
Sbjct: 439 RLAVIEEELEKLQREYNDYEEIWKAEKAAVQGTQAIKEEIDRVRAEMAELQRKGQFDKLA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQL-PNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIV 372
           +L+YG+L +LE  LK     + +   +++ K  LL+T+VG+EEIAE+VSR TGIPV+K++
Sbjct: 499 ELQYGKLPELEARLKAADSAEREAGESDSGKPRLLRTQVGAEEIAEVVSRATGIPVAKMM 558

Query: 373 QVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKT 432
           Q ER+KLL +E+ L KRVVGQDEA+  VS+AIRRSR+GL+D  RPYGSF+FLGPTGVGKT
Sbjct: 559 QGERDKLLRMEDFLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKT 618

Query: 433 ELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYS 492
           EL + L+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS
Sbjct: 619 ELTRALADFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYS 678

Query: 493 LILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGD 552
           +ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I+ M    
Sbjct: 679 VILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQSMAGKP 738

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E+IK  V +E+K  FRPEF+NRID+++VF  L  ++I SIA IQL  L  +L K  M L
Sbjct: 739 YEVIKEVVWDELKHTFRPEFLNRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRL 798

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +S AAL +I+  GFD ++GAR
Sbjct: 799 DVSDAALAEIARSGFDPVFGAR 820


>gi|319943320|ref|ZP_08017603.1| chaperone protein ClpB [Lautropia mirabilis ATCC 51599]
 gi|319743862|gb|EFV96266.1| chaperone protein ClpB [Lautropia mirabilis ATCC 51599]
          Length = 877

 Score =  825 bits (2131), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/629 (63%), Positives = 527/629 (83%), Gaps = 8/629 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+SL +K++L LD+A LLAG KYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDSLKNKRVLALDMAALLAGAKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+I+ ++   I+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 264 KAVLKDIAADEGRTIVFIDEIHTMVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV EP +E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS R
Sbjct: 324 RKYIEKDAALERRFQKVLVGEPSVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSNR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++IK+EIDSKPE+MD+L+RRLIQLKIE EA+++E D++SKK
Sbjct: 384 YITDRFLPDKAIDLIDEAASRIKMEIDSKPEVMDRLDRRLIQLKIEREAVRKETDDASKK 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI++EI ++  +YA+ E+I K EK  ++ S QIK EI+++R ++ +  RK  ++ ++
Sbjct: 444 RLELIEQEIARISKEYADYEEILKAEKAAVQGSAQIKGEIDQLRAQMAELQRKGQYEKLA 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNN----ANKFTLLKTKVGSEEIAEIVSRTTGIPVS 369
           +L+YG+L +LE+ L E +  +  L  +    + K  LL+T VG+EEIAE+VSR TGIPVS
Sbjct: 504 ELQYGKLPELEKRLAEVNAAETNLKADEAAVSGKPKLLRTVVGAEEIAEVVSRATGIPVS 563

Query: 370 KIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGV 429
           K+++ EREKLL +E  L KRVVGQDEA++ VS+AIRRSR+GL+D  RP+GSF+FLGPTGV
Sbjct: 564 KMMEGEREKLLKMEEELHKRVVGQDEAVTLVSDAIRRSRAGLADPNRPWGSFLFLGPTGV 623

Query: 430 GKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRK 489
           GKTELCK L+  +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR 
Sbjct: 624 GKTELCKALARFMFDSEDHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRN 683

Query: 490 PYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME 549
           PYS+ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT++VMTSN+GS +I+ + 
Sbjct: 684 PYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVVMTSNIGSAEIQRLS 743

Query: 550 K----GDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKL 605
                 D ++IK AVM EV+ +FRPEFINRID+++VF  L+ K+I  I+ IQL  L+ +L
Sbjct: 744 ADKTLNDPDVIKEAVMGEVRQHFRPEFINRIDEVVVFHGLDAKHIRDISVIQLKSLEKRL 803

Query: 606 LKMNMDLKISKAALKKISNIGFDLIYGAR 634
            + ++ L++S AAL +++ +GFD +YGAR
Sbjct: 804 AERDLKLEVSDAALDELAKVGFDPLYGAR 832


>gi|33596441|ref|NP_884084.1| ATP-dependent protease, ATPase subunit [Bordetella parapertussis
           12822]
 gi|54035815|sp|Q7W9E6.1|CLPB_BORPA RecName: Full=Chaperone protein ClpB
 gi|33566210|emb|CAE37116.1| ATP-dependent protease, ATPase subunit [Bordetella parapertussis]
          Length = 865

 Score =  825 bits (2131), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/622 (63%), Positives = 516/622 (82%), Gaps = 1/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP +L  K++L LD+A LLAG K+RGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++ +    I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLKELAQDDGQNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVGEPDVESTIAILRGLQERYELHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEA A+I++EIDSKPE+MD+L+RR+IQLKIE EA+K+E D++S +
Sbjct: 379 YITDRFLPDKAIDLIDEAGARIRMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDDASMR 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I++E+ KL+ +Y + E+IWK EK  ++ +Q IKEEI++VR ++ +  RK  +  ++
Sbjct: 439 RLAVIEEELEKLQREYNDYEEIWKAEKAAVQGTQAIKEEIDRVRAEMAELQRKGQFDKLA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQL-PNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIV 372
           +L+YG+L +LE  LK     + +   +++ K  LL+T+VG+EEIAE+VSR TGIPV+K++
Sbjct: 499 ELQYGKLPELEARLKAADSAEREAGESDSGKPRLLRTQVGAEEIAEVVSRATGIPVAKMM 558

Query: 373 QVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKT 432
           Q ER+KLL +E+ L KRVVGQDEA+  VS+AIRRSR+GL+D  RPYGSF+FLGPTGVGKT
Sbjct: 559 QGERDKLLRMEDFLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKT 618

Query: 433 ELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYS 492
           EL + L+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS
Sbjct: 619 ELTRALADFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYS 678

Query: 493 LILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGD 552
           +ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I+ M    
Sbjct: 679 VILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQSMAGKP 738

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E+IK  V +E+K  FRPEF+NRID+++VF  L  ++I SIA IQL  L  +L K  M L
Sbjct: 739 YEVIKEVVWDELKHTFRPEFLNRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRL 798

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +S AAL +I+  GFD ++GAR
Sbjct: 799 DVSDAALAEIARSGFDPVFGAR 820


>gi|33602268|ref|NP_889828.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
           RB50]
 gi|427814108|ref|ZP_18981172.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
           1289]
 gi|54035816|sp|Q7WHB6.1|CLPB_BORBR RecName: Full=Chaperone protein ClpB
 gi|33576707|emb|CAE33785.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
           RB50]
 gi|410565108|emb|CCN22660.1| ATP-dependent protease, ATPase subunit [Bordetella bronchiseptica
           1289]
          Length = 865

 Score =  825 bits (2131), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/622 (63%), Positives = 516/622 (82%), Gaps = 1/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP +L  K++L LD+A LLAG K+RGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++ +    I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLKELAQDDGQNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVGEPDVESTIAILRGLQERYELHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEA A+I++EIDSKPE+MD+L+RR+IQLKIE EA+K+E D++S +
Sbjct: 379 YITDRFLPDKAIDLIDEAGARIRMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDDASMR 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I++E+ KL+ +Y + E+IWK EK  ++ +Q IKEEI++VR ++ +  RK  +  ++
Sbjct: 439 RLAVIEEELEKLQREYNDYEEIWKAEKAAVQGTQAIKEEIDRVRAEMAELQRKGQFDKLA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQL-PNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIV 372
           +L+YG+L +LE  LK     + +   +++ K  LL+T+VG+EEIAE+VSR TGIPV+K++
Sbjct: 499 ELQYGKLPELEARLKAADSAEREAGESDSGKPRLLRTQVGAEEIAEVVSRATGIPVAKMM 558

Query: 373 QVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKT 432
           Q ER+KLL +E+ L KRVVGQDEA+  VS+AIRRSR+GL+D  RPYGSF+FLGPTGVGKT
Sbjct: 559 QGERDKLLRMEDFLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKT 618

Query: 433 ELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYS 492
           EL + L+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS
Sbjct: 619 ELTRALADFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYS 678

Query: 493 LILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGD 552
           +ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I+ M    
Sbjct: 679 VILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQSMAGKP 738

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E+IK  V +E+K  FRPEF+NRID+++VF  L  ++I SIA IQL  L  +L K  M L
Sbjct: 739 YEVIKEVVWDELKHTFRPEFLNRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRL 798

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +S AAL +I+  GFD ++GAR
Sbjct: 799 DVSDAALAEIARSGFDPVFGAR 820


>gi|303257688|ref|ZP_07343700.1| ATP-dependent chaperone protein ClpB [Burkholderiales bacterium
           1_1_47]
 gi|331000598|ref|ZP_08324260.1| ATP-dependent chaperone protein ClpB [Parasutterella
           excrementihominis YIT 11859]
 gi|302859658|gb|EFL82737.1| ATP-dependent chaperone protein ClpB [Burkholderiales bacterium
           1_1_47]
 gi|329571196|gb|EGG52898.1| ATP-dependent chaperone protein ClpB [Parasutterella
           excrementihominis YIT 11859]
          Length = 865

 Score =  825 bits (2131), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/621 (62%), Positives = 519/621 (83%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTA+VEGLAQRI+NGEVP++L +K++L LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAVVEGLAQRIVNGEVPDTLRNKRVLSLDMAGLVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+   +  II+FIDE+HT++G GK EG++DAGNMLKP LSRGELH IGATTL+EY
Sbjct: 260 KALLKEVVAEEGRIILFIDEIHTVVGAGKTEGAMDAGNMLKPALSRGELHVIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKD A ERRFQK++V EP +E+TI+ILRGLQ+KYEVHHGVEITDPAIVAA+ELS R
Sbjct: 320 RKYIEKDPALERRFQKVIVNEPSVEDTIAILRGLQEKYEVHHGVEITDPAIVAAAELSAR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+IK+EIDSKPE +DKL+RRLIQLKIE EA+K+E DE+SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAAARIKMEIDSKPEELDKLDRRLIQLKIEREAVKKEKDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI KL  +Y++LE+IWK EK     S+++++EI+K++ K+ +  R   ++ ++
Sbjct: 440 RLSGLEEEIAKLSREYSDLEEIWKKEKNAALGSKEVRDEIDKLKTKMEELRRSGKYEELA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
            ++YG+L +LE+ L ++ +++ +L +   K  LL+T+VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 AIQYGKLPELEKQLVKEEKEETKLYDEKPK--LLRTQVGAEEIAEVVSRATGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL++   + KRVVGQ EA+  V +AI RSR+GLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 558 GERQKLLDMAKYIGKRVVGQKEAVDKVVDAILRSRAGLSDPNRPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ E+++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LTKALAEFLFDTEDAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ LDDGR+TD +GRT++F+NT+I+MTSNLGS +I   +  D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQALDDGRMTDGQGRTVDFKNTVIIMTSNLGSQEIMNRQGEDP 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E++K AVM+EVK +FRPEFINRID+I+VF  L++K I  IA IQ+  L  ++ + N+ L 
Sbjct: 738 EVVKEAVMDEVKKHFRPEFINRIDEIVVFNALDQKAIREIARIQIRKLAKRMEQQNIGLD 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +++AAL +I  +GFD ++GAR
Sbjct: 798 VTEAALDEIGKVGFDPLFGAR 818


>gi|393757526|ref|ZP_10346350.1| ATP-dependent protease, ATPase subunit [Alcaligenes faecalis subsp.
           faecalis NCIB 8687]
 gi|393165218|gb|EJC65267.1| ATP-dependent protease, ATPase subunit [Alcaligenes faecalis subsp.
           faecalis NCIB 8687]
          Length = 863

 Score =  825 bits (2130), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 409/660 (61%), Positives = 532/660 (80%), Gaps = 13/660 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP +L  K++L+LD+A LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNNEVPETLKGKRVLVLDLAALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S +    I+FIDELHTM+G GK EG++DAGNMLKP LSRGELHCIGATTLNEY
Sbjct: 260 KAVLKELSKDDGKTIVFIDELHTMVGAGKAEGAMDAGNMLKPALSRGELHCIGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EPD+E TI+ILRGLQ++YE+HHGV ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVNEPDMESTIAILRGLQERYELHHGVAITDPAIVAAAELSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAAA+I++EIDSKPE+MDKL+RR+IQLKIE EA+ ++ DE+S++
Sbjct: 380 YITDRFLPDKAIDLIDEAAARIRMEIDSKPEVMDKLDRRIIQLKIEREAVIKDTDEASQR 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  I  E+ KL+ +Y + E++WK EK  ++ SQ +KEEIEKVR ++ +  RK  +  ++
Sbjct: 440 RLQAINDEMEKLQREYNDYEEVWKAEKAAVQGSQVVKEEIEKVRAEMAELQRKGQFDKLA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE  LK  ++ ++   +  +K  LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 500 ELQYGKLPELEERLK-AAEANMDKADQ-DKPRLLRTQVGAEEIAEVVSRATGIPVSKMMQ 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L KRVVGQ EA+  VS+AIRRSR+GLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 558 GEREKLLQMEDYLHKRVVGQGEAVRLVSDAIRRSRAGLSDPSRPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E+ +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LTKALANFLFDSEDHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGS  I+ +     
Sbjct: 678 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSQHIQRLSGEPY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           ++IK  V  EVK +FRPEF+NRID+++VF  L  ++I SIA IQL  L  +L + +M L+
Sbjct: 738 DVIKEVVWEEVKQHFRPEFLNRIDEVVVFHGLEAEHIESIARIQLERLDQRLAQRDMHLE 797

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
           +S AAL +++  GFD ++GAR +   K+++     + H ++P A  I  G     GP+ +
Sbjct: 798 VSDAALAQLAKAGFDPVFGARPL---KRAI-----QQHIENPVARLILEGRF---GPKDV 846


>gi|254493514|ref|ZP_05106685.1| ClpB protein [Neisseria gonorrhoeae 1291]
 gi|226512554|gb|EEH61899.1| ClpB protein [Neisseria gonorrhoeae 1291]
          Length = 859

 Score =  825 bits (2130), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/621 (62%), Positives = 513/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDGAMDAGNMLKPTLARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI+ L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEIDGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQ+EA+ AVS+AIRRSRSGL+D  +PYGSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQNEAVRAVSDAIRRSRSGLADPNKPYGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKP+S+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPHSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD + RT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQDRTVDFKNTVIVMTSNIGSQHIQQMGTQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI SIA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQANIRSIAKIQLKGLEKRLEKQNLRLT 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|429462532|ref|YP_007183995.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
           Kinetoplastibacterium crithidii (ex Angomonas deanei
           ATCC 30255)]
 gi|451811322|ref|YP_007447777.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
           Kinetoplastibacterium crithidii TCC036E]
 gi|429338046|gb|AFZ82469.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
           Kinetoplastibacterium crithidii (ex Angomonas deanei
           ATCC 30255)]
 gi|451776480|gb|AGF47479.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
           Kinetoplastibacterium crithidii TCC036E]
          Length = 860

 Score =  824 bits (2129), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/651 (60%), Positives = 530/651 (81%), Gaps = 9/651 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP++L  KK+L LDIA L+AG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDNLKGKKVLSLDIASLIAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S +  + I+FIDELHT++G GK EGS+DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KSVLKELSIDGNNSILFIDELHTIMGAGKTEGSMDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LVEEPD+E TI+ILRGLQ++YE+HHG+EITDPAIVAA+ELS R
Sbjct: 319 RKYIEKDAALERRFQKVLVEEPDVESTIAILRGLQERYEIHHGIEITDPAIVAAAELSNR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEA A+I++EIDSKPEIMD+L+R++IQLKIE EA+KRE D++S+K
Sbjct: 379 YITDRFLPDKAIDLIDEAGARIRMEIDSKPEIMDRLDRKIIQLKIEKEAVKREKDDASRK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R +LI++E++KL+ +Y + + IWK EK +++ +Q IKEEI+  ++++++  R   +  ++
Sbjct: 439 RFVLIEEELSKLQKEYHDYDDIWKSEKAIVQGTQAIKEEIDNAKIRMSELQRTGQYDKLA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++Y  L +LE  LK    K I   +  +KF LL+T+VGSEEIAE+VSR+TGIPVSK++Q
Sbjct: 499 EIQYSILPELESRLKFAEGK-INNDSKQHKFKLLRTQVGSEEIAEVVSRSTGIPVSKMMQ 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLLN+ N L  RV+GQ+EA+ AVS+AI RSR+GLSD+ RPYGSF+FLG TGVGKTE
Sbjct: 558 GEKDKLLNLSNFLSSRVIGQEEAVQAVSDAIIRSRAGLSDSSRPYGSFLFLGSTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L + L+  +F+  + ++RIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 618 LARALTEFLFDATDHMVRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRRPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++I+MTSNLGS +I  ME    
Sbjct: 678 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVIIMTSNLGSSEINSMEDKPY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + IK  V+  ++   RPEF+NRID+I+VF  L ++++ SI  IQL+ L +++ + +M + 
Sbjct: 738 DKIKEIVLGTIRQVLRPEFLNRIDEIVVFHNLEQRHMESIVRIQLDRLNHRIQQKDMSID 797

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGD 664
           ++ AA+  +SNIGFD  +GAR +        ++ ++I  ++P A  I  GD
Sbjct: 798 VTNAAISALSNIGFDSNFGARPLK------RLIQQRI--ENPLAKLILRGD 840


>gi|33592328|ref|NP_879972.1| ATP-dependent protease, ATPase subunit [Bordetella pertussis Tohama
           I]
 gi|384203631|ref|YP_005589370.1| ATP-dependent protease, ATPase subunit [Bordetella pertussis CS]
 gi|54035814|sp|Q7VYV6.1|CLPB_BORPE RecName: Full=Chaperone protein ClpB
 gi|33571973|emb|CAE41494.1| ATP-dependent protease, ATPase subunit [Bordetella pertussis Tohama
           I]
 gi|332381745|gb|AEE66592.1| ATP-dependent protease, ATPase subunit [Bordetella pertussis CS]
          Length = 865

 Score =  824 bits (2129), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/622 (63%), Positives = 515/622 (82%), Gaps = 1/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP +L  K++L LD+A LLAG K+RGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++ +    I+FIDELHTM G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLKELAQDDGQNIVFIDELHTMAGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVGEPDVESTIAILRGLQERYELHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEA A+I++EIDSKPE+MD+L+RR+IQLKIE EA+K+E D++S +
Sbjct: 379 YITDRFLPDKAIDLIDEAGARIRMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDDASMR 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I++E+ KL+ +Y + E+IWK EK  ++ +Q IKEEI++VR ++ +  RK  +  ++
Sbjct: 439 RLAVIEEELEKLQREYNDYEEIWKAEKAAVQGTQAIKEEIDRVRAEMAELQRKGQFDKLA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQL-PNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIV 372
           +L+YG+L +LE  LK     + +   +++ K  LL+T+VG+EEIAE+VSR TGIPV+K++
Sbjct: 499 ELQYGKLPELEARLKAADSAEREAGESDSGKPRLLRTQVGAEEIAEVVSRATGIPVAKMM 558

Query: 373 QVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKT 432
           Q ER+KLL +E+ L KRVVGQDEA+  VS+AIRRSR+GL+D  RPYGSF+FLGPTGVGKT
Sbjct: 559 QGERDKLLRMEDFLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKT 618

Query: 433 ELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYS 492
           EL + L+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS
Sbjct: 619 ELTRALADFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYS 678

Query: 493 LILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGD 552
           +ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I+ M    
Sbjct: 679 VILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQSMAGKP 738

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E+IK  V +E+K  FRPEF+NRID+++VF  L  ++I SIA IQL  L  +L K  M L
Sbjct: 739 YEVIKEVVWDELKHTFRPEFLNRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRL 798

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +S AAL +I+  GFD ++GAR
Sbjct: 799 DVSDAALAEIARSGFDPVFGAR 820


>gi|288941086|ref|YP_003443326.1| ATP-dependent chaperone ClpB [Allochromatium vinosum DSM 180]
 gi|288896458|gb|ADC62294.1| ATP-dependent chaperone ClpB [Allochromatium vinosum DSM 180]
          Length = 865

 Score =  824 bits (2129), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/680 (58%), Positives = 537/680 (78%), Gaps = 20/680 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L SK++L LD+A L+AG+K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKSKRLLALDMAALIAGSKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDIARQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKDAA ERRFQK+LV+EP++E+TI+ILRGL+++YEVHH VEITD AIVAA+ LS+R
Sbjct: 320 RKYVEKDAALERRFQKVLVDEPNVEDTIAILRGLKERYEVHHAVEITDTAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDS PE MD+L+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YIADRQLPDKAIDLIDEAASRIRMEIDSMPEEMDRLDRRLIQLKIEREALKKESDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I +LE ++A+L++IWK EK  ++ +  IKE +++VRL++  A R  DW  +S
Sbjct: 440 RLADLEGQIARLEREFADLDEIWKSEKAAVQGTAHIKEALDRVRLEMETARRAGDWTRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   SQ +       N+  LL+ KV  EE+AE+VS+ TGIP+SK+++
Sbjct: 500 ELQYGRVPELEKQLAAASQAE----QGENR--LLRNKVTDEEVAEVVSKWTGIPISKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ + +RVVGQ+EA+ AVS+AIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMESEIEQRVVGQNEAVRAVSDAIRRSRAGLSDPGRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+A +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RR+PYSL
Sbjct: 614 LCKALAAFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRN++IVMTSNLGSD I++   G+ 
Sbjct: 674 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNSVIVMTSNLGSDIIQQ-RAGEA 732

Query: 554 EI--IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
               +K AVM  V+  FRPEFINR+D+I+VF  L +  I +IA IQL  L+ +L + +M 
Sbjct: 733 HYAEMKEAVMESVRHAFRPEFINRLDEIVVFHPLQQAQIRAIARIQLGYLQQRLAERDMK 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           L++S AAL  +   GFD +YGAR +   K+++   L     ++P A  I  G     GP 
Sbjct: 793 LEVSDAALDHLGAAGFDPVYGARPL---KRAIRAQL-----ENPLAQQILSGKF---GPG 841

Query: 672 SLDTLRMVYSMRNYAKIVLG 691
            L  + +     ++ +++ G
Sbjct: 842 DLIEVGLADGQLSFERVLQG 861


>gi|270159567|ref|ZP_06188223.1| chaperone protein ClpB [Legionella longbeachae D-4968]
 gi|289165637|ref|YP_003455775.1| endopeptidase Clp ATP-binding subunit B [Legionella longbeachae
           NSW150]
 gi|269987906|gb|EEZ94161.1| chaperone protein ClpB [Legionella longbeachae D-4968]
 gi|288858810|emb|CBJ12724.1| endopeptidase Clp ATP-binding chain B (ClpB) [Legionella
           longbeachae NSW150]
          Length = 859

 Score =  824 bits (2128), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 405/684 (59%), Positives = 538/684 (78%), Gaps = 27/684 (3%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRLLALDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLNDLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP +E+TI+ILRGL+++YEVHHGVEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYEVHHGVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEA + I++EIDSKPE MDKLERRLIQLKIE EA+K+E+DE+SKK
Sbjct: 380 YITDRQLPDKAIDLIDEAGSLIRMEIDSKPESMDKLERRLIQLKIEREALKKEHDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++  I++LE  Y++LE++WK EK  ++ + QIKE +E+ +L++  A R  D   +S
Sbjct: 440 RLEDLQHTIDELEHNYSDLEEVWKAEKATMQGATQIKEALEQAKLEMETARRAGDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L + +  + Q      +  L++ KV  +E+AE+VSR TGIPV+K+++
Sbjct: 500 ELQYGRIPELEKRLAQVATTESQ------ETKLVRNKVTEDEVAEVVSRWTGIPVAKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L  R++GQ+EAI AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEVLHNRLIGQNEAIEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALATFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ++DDGRLTD +GRT++FRNTIIVMTSNLGS+ I+EM  G+K
Sbjct: 674 ILLDEVEKAHTDVFNILLQVMDDGRLTDGQGRTVDFRNTIIVMTSNLGSNLIQEM--GNK 731

Query: 554 ---EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNM 610
              E IK AVM  V+ +FRPEFINRIDD +VF  L ++ I  IA IQ++ L+ +L + ++
Sbjct: 732 FKYEQIKEAVMEMVRQHFRPEFINRIDDTVVFHALIKEQIAKIAAIQISYLQKRLKQQDI 791

Query: 611 DLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGP 670
            L++++ AL  ++  GFD +YGAR +   K+++   L     ++P A  I  G       
Sbjct: 792 HLEVTQEALTHLAEAGFDPVYGARPL---KRTIQQQL-----ENPLAQAILTGRF----- 838

Query: 671 QSLDTLRMVYSMRNYAKIVLGNHE 694
           +S DT+ + Y     A++    HE
Sbjct: 839 KSGDTIDVTY---QDAEMRFAGHE 859


>gi|422631434|ref|ZP_16696620.1| AAA ATPase, central region [Pseudomonas syringae pv. pisi str.
           1704B]
 gi|330941203|gb|EGH44077.1| AAA ATPase, central region [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 854

 Score =  824 bits (2128), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/621 (62%), Positives = 507/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAATK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI +LE++YA+LE+IW  EK  +  S QI+++IE+ R ++  A R+ D   ++
Sbjct: 440 RLEKLQGEIERLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL  RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GEREKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSL
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEF+NRID++++F  L R  I  I +IQL  L+ +L +  + + 
Sbjct: 733 EAQRAAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELSMT 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLIAVGYDPVYGAR 813


>gi|104783632|ref|YP_610130.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
           entomophila L48]
 gi|95112619|emb|CAK17347.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
           entomophila L48]
          Length = 854

 Score =  823 bits (2127), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/621 (62%), Positives = 509/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KALLNELSKQEGQIILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQFIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +EI++LE +YA+LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLTEEIDRLEREYADLEEIWASEKAEVQGSAQIQQKIEQARQELEAARRKGDLSRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +      LL+ KV  EEIAE+VS+ TGIPV+K+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKTDNQLLRNKVTEEEIAEVVSKWTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+LL +RV+GQDEA++AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLKMESLLHERVIGQDEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 VLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-AGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID+++VF  L R+ I  I  IQL  L+ +L +  + L 
Sbjct: 733 EAQRAAVMDAVGSHFRPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRGRLAERELSLS 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLIAVGYDPVYGAR 813


>gi|433516062|ref|ZP_20472828.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
           2004090]
 gi|433528540|ref|ZP_20485149.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
           NM3652]
 gi|433530748|ref|ZP_20487332.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
           NM3642]
 gi|433533013|ref|ZP_20489574.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
           2007056]
 gi|433534808|ref|ZP_20491345.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
           2001212]
 gi|432252388|gb|ELL07744.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
           2004090]
 gi|432265341|gb|ELL20537.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
           NM3652]
 gi|432265558|gb|ELL20750.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
           NM3642]
 gi|432265978|gb|ELL21167.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
           2007056]
 gi|432270815|gb|ELL25949.1| ATP-dependent chaperone protein ClpB [Neisseria meningitidis
           2001212]
          Length = 859

 Score =  823 bits (2127), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/621 (62%), Positives = 511/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L+LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRNKRLLVLDLAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ +  + +IFIDE+HT++G GK + ++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKDDGNTLIFIDEIHTLVGAGKTDSAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV EP +E+TI+ILRGLQ++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 320 RQYIEKDAALERRFQKVLVGEPSVEDTIAILRGLQERYEIHHGIDITDPAIVAAAELSDR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA+++K+E ++KPE MDK++RRLIQL++E   +++E D++SKK
Sbjct: 380 YITDRFLPDKAIDLIDEAASRVKMEKETKPEAMDKIDRRLIQLRMEKAHVEKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EIN L+ +YA+L++IWK EK +   +  IK++I++V++KI +A R+ D    S
Sbjct: 440 RLELIDEEINGLQKEYADLDEIWKAEKAISDGAANIKKQIDEVKIKIEQAKRQGDLALAS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL Y +L  LE+      + D      ANK  LL+  VG+EEIAE+VSR TGIPVSK+++
Sbjct: 500 KLMYEDLEHLEKQRAAAERADTDSTKPANK--LLRNNVGAEEIAEVVSRMTGIPVSKMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L +RVVGQDE + AVS+AIRRSRSGL+D  +PYGSF+FLG TGVGKTE
Sbjct: 558 GERDKLLKMEEVLHRRVVGQDETVRAVSDAIRRSRSGLADPNKPYGSFLFLGSTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E+ +IRIDMSE++EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALAGFLFDSEDHLIRIDMSEYMEKHAVARLIGAPPGYVGYEEGGYLTEQVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSN+GS  I++M   D 
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNIGSQHIQQMGIQDY 737

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM +VK +FRPE INRID+++VF  L++ NI +IA IQL  L+ +L K N+ L 
Sbjct: 738 EAVKEVVMEDVKEHFRPEMINRIDEVVVFHGLDQDNIRNIAKIQLKGLEKRLEKQNLRLT 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AAL  I+  GFD IYGAR
Sbjct: 798 VSDAALDIIAKAGFDPIYGAR 818


>gi|410473590|ref|YP_006896871.1| ATP-dependent protease, ATPase subunit [Bordetella parapertussis
           Bpp5]
 gi|408443700|emb|CCJ50378.1| ATP-dependent protease, ATPase subunit [Bordetella parapertussis
           Bpp5]
          Length = 865

 Score =  823 bits (2127), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/622 (63%), Positives = 515/622 (82%), Gaps = 1/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP +L  K++L LD+A LLAG K+RGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++ +    I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLKELAQDDGQNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVGEPDVESTIAILRGLQERYELHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEA A+I++EIDSKPE+MD+L+RR+IQLKIE EA+K+E D++S +
Sbjct: 379 YITDRFLPDKAIDLIDEAGARIRMEIDSKPEVMDRLDRRIIQLKIEREAVKKETDDASMR 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I++E+ KL+ +Y + E+IWK EK  ++ +Q IKEEI++VR ++ +  RK  +  ++
Sbjct: 439 RLAVIEEELEKLQREYNDYEEIWKAEKAAVQGTQAIKEEIDRVRAEMAELQRKGQFDKLA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQL-PNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIV 372
           +L+YG+L +LE  LK     + +   +++ K  LL+T+VG EEIAE+VSR TGIPV+K++
Sbjct: 499 ELQYGKLPELEARLKAADSAEREAGESDSGKPRLLRTQVGVEEIAEVVSRATGIPVAKMM 558

Query: 373 QVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKT 432
           Q ER+KLL +E+ L KRVVGQDEA+  VS+AIRRSR+GL+D  RPYGSF+FLGPTGVGKT
Sbjct: 559 QGERDKLLRMEDFLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGVGKT 618

Query: 433 ELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYS 492
           EL + L+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS
Sbjct: 619 ELTRALADFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYS 678

Query: 493 LILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGD 552
           +ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I+ M    
Sbjct: 679 VILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQSMAGKP 738

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E+IK  V +E+K  FRPEF+NRID+++VF  L  ++I SIA IQL  L  +L K  M L
Sbjct: 739 YEVIKEVVWDELKHTFRPEFLNRIDEVVVFHGLEAQHIESIARIQLKRLGERLEKQEMRL 798

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +S AAL +I+  GFD ++GAR
Sbjct: 799 DVSDAALAEIARSGFDPVFGAR 820


>gi|344344157|ref|ZP_08775021.1| ATP-dependent chaperone ClpB [Marichromatium purpuratum 984]
 gi|343804114|gb|EGV22016.1| ATP-dependent chaperone ClpB [Marichromatium purpuratum 984]
          Length = 864

 Score =  823 bits (2125), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/658 (59%), Positives = 521/658 (79%), Gaps = 11/658 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L S+++L LD+A L+AG K+RGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKSRRLLSLDMAALIAGAKFRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 258 KAVLNDIARQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKDAA ERRFQK+LV+EP++E+TI+ILRGL+++YEVHH VEITDPAIVAA+ LS+R
Sbjct: 318 RKYVEKDAALERRFQKVLVDEPNVEDTIAILRGLKERYEVHHAVEITDPAIVAAATLSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDL+DEAA+ I++EIDS PE MD+L+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 378 YISDRQLPDKAIDLVDEAASHIRMEIDSMPEEMDRLDRRLIQLKIEREALKKESDEASRK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ E+ +LE ++A+L+++WK EK  +  +  IKE +++ R+++  A R  D   +S
Sbjct: 438 RLADLEDEVGRLEREFADLDEVWKSEKAAVAGTAHIKEALDRARVEMETARRAGDLGRMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +    Q  N      LL+ KVG EEIAEIVSR TGIPVS++++
Sbjct: 498 ELQYGRIPELEKQLASAAAGTEQGDNR-----LLRNKVGDEEIAEIVSRWTGIPVSRMLE 552

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  + +RVVGQDEA+ AVS+AIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 553 GERDKLLRMEQEIGRRVVGQDEAVGAVSDAIRRSRAGLSDPARPIGSFLFLGPTGVGKTE 612

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GY+EGGYLTE VRR+PYSL
Sbjct: 613 LCKTLASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYDEGGYLTEAVRRRPYSL 672

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS+ I++   G+ 
Sbjct: 673 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSEVIQQ-HAGEA 731

Query: 554 EI--IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
               +K AVM  V+  FRPEFINR+D+I+VF  L +  I +IA IQL+ L+ +L    M 
Sbjct: 732 AYAEMKTAVMAVVRQAFRPEFINRLDEIVVFHPLQQTQIRAIARIQLDYLQRRLADREMR 791

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKG 669
           L++  AAL  +   GFD +YGAR +   K+++   L+    +   A     GDLI  G
Sbjct: 792 LEVGDAALDLLGEAGFDPVYGARPL---KRAIRAQLENPLAQEILAGKFAPGDLIEVG 846


>gi|345863973|ref|ZP_08816179.1| chaperone protein ClpB [endosymbiont of Tevnia jerichonana (vent
           Tica)]
 gi|345124880|gb|EGW54754.1| chaperone protein ClpB [endosymbiont of Tevnia jerichonana (vent
           Tica)]
          Length = 862

 Score =  823 bits (2125), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/622 (61%), Positives = 508/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L SK++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKSKRLLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQY+EKDAA ERRFQK+LVEEP +E+TI+ILRGL+++YEVHHGV+ITDPAIVAA+ LS+R
Sbjct: 320 RQYVEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYEVHHGVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDS PE MD+LERRLIQLKIE EA+ +E DE+SKK
Sbjct: 380 YITDRQLPDKAIDLVDEAASQIRMEIDSMPEEMDRLERRLIQLKIEREAMNKETDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI +LE ++++LE+IWK EK  ++ +  IKE +E+ RL+++ A R  D   +S
Sbjct: 440 RLAHLESEIERLEREFSDLEEIWKSEKAALQGTTHIKESLERARLEMDTARRAGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      +  LL+ KV  EEIA +VS+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDMAAQAEMQ------QMKLLRNKVTDEEIAGVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  + +RV+GQ E I AVS+AIRRSR+GL+D  +P GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEQEIGRRVIGQQEGIKAVSDAIRRSRAGLADPSQPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALAEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           IL+DE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS+ I+E    ++
Sbjct: 674 ILMDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSELIQEKSTEEQ 733

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
             ++K AVM  V+  FRPEFINR+D+I+VF  L R+ I +IA IQ++ L+ +L    M L
Sbjct: 734 YGVMKEAVMEVVRSAFRPEFINRLDEIVVFHPLAREQIRAIATIQIDYLRRRLADHEMGL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +IS AAL ++   GFD +YGAR
Sbjct: 794 QISDAALDRLGEAGFDPVYGAR 815


>gi|422621047|ref|ZP_16689715.1| AAA ATPase, central region [Pseudomonas syringae pv. japonica str.
           M301072]
 gi|443641450|ref|ZP_21125300.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
           syringae pv. syringae B64]
 gi|330901395|gb|EGH32814.1| AAA ATPase, central region [Pseudomonas syringae pv. japonica str.
           M301072]
 gi|443281467|gb|ELS40472.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
           syringae pv. syringae B64]
          Length = 854

 Score =  823 bits (2125), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/621 (62%), Positives = 507/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI +LE++YA+LE+IW  EK  +  S QI+++IE+ R ++  A R+ D   ++
Sbjct: 440 RLEKLQGEIERLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL  RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GEREKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSL
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEF+NRID++++F  L R  I  I +IQL  L+ +L +  + + 
Sbjct: 733 EAQRAAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELSMT 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLIAVGYDPVYGAR 813


>gi|440745962|ref|ZP_20925249.1| ATPase AAA [Pseudomonas syringae BRIP39023]
 gi|440371783|gb|ELQ08615.1| ATPase AAA [Pseudomonas syringae BRIP39023]
          Length = 854

 Score =  823 bits (2125), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/621 (63%), Positives = 507/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI +LE++YA+LE+IW  EK  +  S QI+++IE+ R ++  A R+ D   ++
Sbjct: 440 RLEKLQGEIQRLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL  RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GEREKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGYIGYEEGGYLTE VRRKPYSL
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYIGYEEGGYLTEAVRRKPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEF+NRID++++F  L R  I  I +IQL  L+ +L +  + + 
Sbjct: 733 EAQRAAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELSMT 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLIAVGYDPVYGAR 813


>gi|254449004|ref|ZP_05062458.1| ATP-dependent chaperone ClpB [gamma proteobacterium HTCC5015]
 gi|198261398|gb|EDY85689.1| ATP-dependent chaperone ClpB [gamma proteobacterium HTCC5015]
          Length = 854

 Score =  822 bits (2124), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/624 (61%), Positives = 511/624 (81%), Gaps = 11/624 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  + +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRLLSLDLGALIAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  II+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 258 KALLNDLAKQEGQIILFIDEIHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+T++ILRGL+++YEVHHGV++TDPAIV+A+ LS R
Sbjct: 318 RQYIEKDAALERRFQKVLVDEPSVEDTVAILRGLKERYEVHHGVDVTDPAIVSAATLSQR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE MDKLERRLIQLKIE EA+K+E DE+SKK
Sbjct: 378 YITDRQLPDKAIDLIDEAASRIRMEIDSKPESMDKLERRLIQLKIEREALKKESDEASKK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I  LE +YA+L+++W+ EK+ ++ +  +KE +++ R+++  A R  D   +S
Sbjct: 438 RLNDLETQIRSLEKEYADLDEVWRSEKSAVQGNTNVKEALDRARVELETARRAGDLSRMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L +    D        +FTLL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 498 ELQYGTIPELEQQLDQAESDD------EREFTLLRNKVTEEEIAEVVSKWTGIPVSKMLE 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RVVGQDEA+ AVS+A+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GERDKLLRMEAALHQRVVGQDEAVRAVSDAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+A +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 612 LTKALAAFLFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT++VMTSNLGS +I+ +  GD 
Sbjct: 672 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSSEIQML--GDV 729

Query: 554 EI---IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNM 610
                +K AVM EV  +FRPEFINRID+ +VF  L++  I +IA +QL  L+ ++ + ++
Sbjct: 730 STYDDMKAAVMEEVGKHFRPEFINRIDEAVVFHSLDQTQIRAIAEVQLQSLRRRMQERDL 789

Query: 611 DLKISKAALKKISNIGFDLIYGAR 634
            L+IS+AAL K+   GFD +YGAR
Sbjct: 790 SLEISEAALDKLGEAGFDPVYGAR 813


>gi|386826620|ref|ZP_10113727.1| ATP-dependent chaperone ClpB [Beggiatoa alba B18LD]
 gi|386427504|gb|EIJ41332.1| ATP-dependent chaperone ClpB [Beggiatoa alba B18LD]
          Length = 863

 Score =  822 bits (2123), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/622 (62%), Positives = 503/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGKRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP++E+TI+ILRGL+++YEVHHGV+ITDPAIVAA+ LS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPNVEDTIAILRGLKERYEVHHGVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE MDKL+RRLIQLKIE EA+K+E D++SKK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPERMDKLDRRLIQLKIEREAMKKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + ++I + E + A+L ++W  EK  ++ SQ IKEE+E+ +L +  A R  D   +S
Sbjct: 440 RLEKLNEDIQRAERELADLNEVWNSEKAAVQGSQHIKEELEQAKLALETARRAGDLTRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L    + + Q      +  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKRLSAAGKAETQ------EMQLLRNKVTDEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RVVGQ EA+  VSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEEALHQRVVGQSEAVKLVSNAIRRSRAGLADPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE++IRIDMSEF+EKH+++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAGFLFDTEEAMIRIDMSEFMEKHTVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ +VFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I+EM   D 
Sbjct: 674 ILLDEVEKAHPEVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQVIQEMAGEDN 733

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K AVM  V   FRPEFINRIDD++VF  L +  I SIA IQ+ +L+ +L  M+++L
Sbjct: 734 YNAMKAAVMEIVSQQFRPEFINRIDDVVVFHPLGKAQIRSIAGIQIGLLRKRLGAMSIEL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS AAL  +  +GFD +YGAR
Sbjct: 794 SISDAALDLLGEVGFDPVYGAR 815


>gi|293606291|ref|ZP_06688652.1| chaperone protein ClpB [Achromobacter piechaudii ATCC 43553]
 gi|292815286|gb|EFF74406.1| chaperone protein ClpB [Achromobacter piechaudii ATCC 43553]
          Length = 868

 Score =  822 bits (2122), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/625 (63%), Positives = 512/625 (81%), Gaps = 4/625 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP +L  K++L LD+A LLAG K+RGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+  +    I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLKELGQDDGSNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVDEPDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEA A+I++EIDSKPE+MDKL+RR+IQLKIE EA+K+E D++SK+
Sbjct: 379 YITDRFLPDKAIDLIDEAGARIRMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDDASKR 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I+ E+ KL+ +Y + E+IWK EK  ++ +Q IKEEI+ VR ++ +  RK  +  ++
Sbjct: 439 RLGVIEDELEKLQREYNDYEEIWKAEKAAVQGTQAIKEEIDSVRAEMAELQRKGQFDKLA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNA----NKFTLLKTKVGSEEIAEIVSRTTGIPVS 369
           +L+YG+L  LE  LK       Q   NA     +  LL+T+VG+EEIAE+VSR TGIPVS
Sbjct: 499 ELQYGKLPDLESRLKAAEVGAQQAAENAEGDNGRPRLLRTRVGAEEIAEVVSRATGIPVS 558

Query: 370 KIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGV 429
           K++Q EREKLL++E  L KRVVGQDEA+  VS+AIRRSR+GL+D  RPYGSF+FLGPTGV
Sbjct: 559 KMMQGEREKLLHMEEFLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGV 618

Query: 430 GKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRK 489
           GKTEL + L+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRK
Sbjct: 619 GKTELTRALAEFMFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRK 678

Query: 490 PYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME 549
           PYS++LLDEIEKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I+ + 
Sbjct: 679 PYSVVLLDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHHIQSLA 738

Query: 550 KGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
               +++K  V  E++   RPEF+NRID+++VF  L  ++I SIA IQL  L  +L K  
Sbjct: 739 GQPYDVVKEVVWGELRQTLRPEFLNRIDEVVVFHGLEAQHIESIARIQLRRLGARLEKQE 798

Query: 610 MDLKISKAALKKISNIGFDLIYGAR 634
           M L++++AAL +++  GFD ++GAR
Sbjct: 799 MRLEVTEAALAELARSGFDPVFGAR 823


>gi|424070606|ref|ZP_17808040.1| clpB protein [Pseudomonas syringae pv. avellanae str. ISPaVe037]
 gi|440724230|ref|ZP_20904560.1| ATPase AAA [Pseudomonas syringae BRIP34876]
 gi|440728950|ref|ZP_20909149.1| ATPase AAA [Pseudomonas syringae BRIP34881]
 gi|408000304|gb|EKG40665.1| clpB protein [Pseudomonas syringae pv. avellanae str. ISPaVe037]
 gi|440358167|gb|ELP95557.1| ATPase AAA [Pseudomonas syringae BRIP34876]
 gi|440360351|gb|ELP97629.1| ATPase AAA [Pseudomonas syringae BRIP34881]
          Length = 854

 Score =  822 bits (2122), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/621 (62%), Positives = 507/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGSLIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI +LE++YA+LE+IW  EK  +  S QI+++IE+ R ++  A R+ D   ++
Sbjct: 440 RLEKLQGEIERLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL  RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GEREKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSL
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEF+NRID++++F  L R  I  I +IQL  L+ +L +  + + 
Sbjct: 733 EAQRAAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELSMT 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLIAVGYDPVYGAR 813


>gi|388456237|ref|ZP_10138532.1| endopeptidase Clp ATP-binding subunit B [Fluoribacter dumoffii
           Tex-KL]
          Length = 858

 Score =  822 bits (2122), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/624 (62%), Positives = 517/624 (82%), Gaps = 11/624 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLNDLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEA + I++EIDSKPE MDKLERRLIQLKIE EA+K+E+DE+SKK
Sbjct: 380 YITDRQLPDKAIDLIDEAGSLIRMEIDSKPESMDKLERRLIQLKIEREALKKEHDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++  I +LE  Y++LE++WK EK  ++ + QIKE +E+ +L++  A R  D   +S
Sbjct: 440 RLEDLEHTIEELEHNYSDLEEVWKAEKATMQGATQIKESLEQAKLEMETARRAGDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L + +    ++ ++ NK  L++ KV  +E+AE+VS+ TGIPV+K+++
Sbjct: 500 ELQYGRIPELEKRLAQVA----EVESHENK--LVRNKVTEDEVAEVVSKWTGIPVAKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L  R++GQ+EAI AVSN+IRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEVLHNRLIGQNEAIDAVSNSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ++DDGRLTD +GRT++FRNTIIVMTSNLGS+ I+EM  G+K
Sbjct: 674 ILLDEVEKAHADVFNILLQVMDDGRLTDGQGRTVDFRNTIIVMTSNLGSNLIQEM--GNK 731

Query: 554 ---EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNM 610
              E IK AVM  V+ +FRPEFINRIDD +VF  L +  I  IA IQ++ L+ +L + ++
Sbjct: 732 FKYEQIKDAVMEMVRQHFRPEFINRIDDTVVFHSLEKDQIAKIAAIQISYLQKRLKQQDI 791

Query: 611 DLKISKAALKKISNIGFDLIYGAR 634
            L+++K AL  +++ GFD +YGAR
Sbjct: 792 HLEVTKEALTHLADAGFDPVYGAR 815


>gi|423689870|ref|ZP_17664390.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens
           SS101]
 gi|388002306|gb|EIK63635.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens
           SS101]
          Length = 854

 Score =  822 bits (2122), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/621 (62%), Positives = 512/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIVRLEREYSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+LL +RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLLKMESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  +DL+
Sbjct: 733 EAQRAAVMDALTTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELDLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSGEALDKLIAVGYDPVYGAR 813


>gi|388469396|ref|ZP_10143605.1| ATP-dependent chaperone protein ClpB [Pseudomonas synxantha BG33R]
 gi|388006093|gb|EIK67359.1| ATP-dependent chaperone protein ClpB [Pseudomonas synxantha BG33R]
          Length = 854

 Score =  821 bits (2121), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/621 (62%), Positives = 512/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIVRLEREYSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLSRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+LL +RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLLKMESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  +DL+
Sbjct: 733 EAQRAAVMDALTTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELDLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSGEALDKLIAVGYDPVYGAR 813


>gi|387892000|ref|YP_006322297.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens A506]
 gi|387162601|gb|AFJ57800.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens A506]
          Length = 854

 Score =  821 bits (2121), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/621 (62%), Positives = 512/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIVRLEREYSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+LL +RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLLKMESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  +DL+
Sbjct: 733 EAQRAAVMDALTTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELDLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSSEALDKLIAVGYDPVYGAR 813


>gi|107099795|ref|ZP_01363713.1| hypothetical protein PaerPA_01000813 [Pseudomonas aeruginosa PACS2]
          Length = 849

 Score =  821 bits (2121), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/621 (61%), Positives = 512/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 195 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERL 254

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+   +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 255 KAVLNELGKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 314

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+R
Sbjct: 315 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVSITDGAIIAAAKLSHR 374

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE+++K
Sbjct: 375 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATRK 434

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++++I KLE +YA+LE+IWK EK  ++ S QI+++IE+ + ++  A RK D ++++
Sbjct: 435 RLAKLEEDIVKLEREYADLEEIWKSEKAEVQGSAQIQQKIEQAKQEMEAARRKGDLESMA 494

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++Y  +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 495 RIQYQTIPDLERSLQMVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPVSKMLE 548

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQDEA+ AVSNA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 549 GEREKLLRMEQELHRRVIGQDEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTE 608

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+G+EEGGYLTE +RRKPYS+
Sbjct: 609 LCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGFEEGGYLTEAIRRKPYSV 668

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+  GD+
Sbjct: 669 VLLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQEL-AGDR 727

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID+++VF  L R+ I  IA IQL  L+ +L +  + L+
Sbjct: 728 EAQRAAVMDAVNAHFRPEFINRIDEVVVFEPLAREQIAGIAEIQLGRLRKRLAERELSLE 787

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ AL K+  +GFD +YGAR
Sbjct: 788 LSQEALDKLIAVGFDPVYGAR 808


>gi|218893637|ref|YP_002442506.1| ClpB protein [Pseudomonas aeruginosa LESB58]
 gi|421182603|ref|ZP_15640077.1| ClpB protein [Pseudomonas aeruginosa E2]
 gi|218773865|emb|CAW29679.1| ClpB protein [Pseudomonas aeruginosa LESB58]
 gi|404541751|gb|EKA51100.1| ClpB protein [Pseudomonas aeruginosa E2]
          Length = 854

 Score =  821 bits (2121), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/621 (61%), Positives = 512/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+   +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELGKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVSITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE+++K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++++I KLE +YA+LE+IWK EK  ++ S QI+++IE+ + ++  A RK D ++++
Sbjct: 440 RLAKLEEDIVKLEREYADLEEIWKSEKAEVQGSAQIQQKIEQAKQEMEAARRKGDLESMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++Y  +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 RIQYQTIPDLERSLQMVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQDEA+ AVSNA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHRRVIGQDEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+G+EEGGYLTE +RRKPYS+
Sbjct: 614 LCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGFEEGGYLTEAIRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+  GD+
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQEL-AGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID+++VF  L R+ I  IA IQL  L+ +L +  + L+
Sbjct: 733 EAQRAAVMDAVNAHFRPEFINRIDEVVVFEPLAREQIAGIAEIQLGRLRKRLAERELSLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ AL K+  +GFD +YGAR
Sbjct: 793 LSQEALDKLIAVGFDPVYGAR 813


>gi|15599738|ref|NP_253232.1| ClpB protein [Pseudomonas aeruginosa PAO1]
 gi|116052687|ref|YP_793003.1| clpB protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|254238710|ref|ZP_04932033.1| ClpB protein [Pseudomonas aeruginosa C3719]
 gi|296391363|ref|ZP_06880838.1| clpB protein [Pseudomonas aeruginosa PAb1]
 gi|313107187|ref|ZP_07793386.1| clpB protein [Pseudomonas aeruginosa 39016]
 gi|355652375|ref|ZP_09056771.1| chaperone ClpB [Pseudomonas sp. 2_1_26]
 gi|386060694|ref|YP_005977216.1| ClpB protein [Pseudomonas aeruginosa M18]
 gi|386064010|ref|YP_005979314.1| putative ClpA/B-type chaperone [Pseudomonas aeruginosa NCGM2.S1]
 gi|392986205|ref|YP_006484792.1| clpB protein [Pseudomonas aeruginosa DK2]
 gi|416858844|ref|ZP_11913559.1| clpB protein [Pseudomonas aeruginosa 138244]
 gi|416877399|ref|ZP_11919799.1| clpB protein [Pseudomonas aeruginosa 152504]
 gi|418584141|ref|ZP_13148206.1| clpB protein [Pseudomonas aeruginosa MPAO1/P1]
 gi|418590194|ref|ZP_13154107.1| clpB protein [Pseudomonas aeruginosa MPAO1/P2]
 gi|419752087|ref|ZP_14278496.1| clpB protein [Pseudomonas aeruginosa PADK2_CF510]
 gi|421155962|ref|ZP_15615421.1| ClpB protein [Pseudomonas aeruginosa ATCC 14886]
 gi|421170310|ref|ZP_15628272.1| ClpB protein [Pseudomonas aeruginosa ATCC 700888]
 gi|421176800|ref|ZP_15634459.1| ClpB protein [Pseudomonas aeruginosa CI27]
 gi|421519096|ref|ZP_15965768.1| putative ClpA/B-type chaperone [Pseudomonas aeruginosa PAO579]
 gi|424944692|ref|ZP_18360455.1| ClpB protein [Pseudomonas aeruginosa NCMG1179]
 gi|451983095|ref|ZP_21931390.1| ClpB protein [Pseudomonas aeruginosa 18A]
 gi|54035903|sp|Q9HVN5.1|CLPB_PSEAE RecName: Full=Chaperone protein ClpB
 gi|9950786|gb|AAG07930.1|AE004868_1 ClpB protein [Pseudomonas aeruginosa PAO1]
 gi|32423740|gb|AAP81264.1| ClpB [Pseudomonas aeruginosa PA14]
 gi|115587908|gb|ABJ13923.1| clpB protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126170641|gb|EAZ56152.1| ClpB protein [Pseudomonas aeruginosa C3719]
 gi|310879888|gb|EFQ38482.1| clpB protein [Pseudomonas aeruginosa 39016]
 gi|334838994|gb|EGM17693.1| clpB protein [Pseudomonas aeruginosa 138244]
 gi|334839646|gb|EGM18324.1| clpB protein [Pseudomonas aeruginosa 152504]
 gi|346061138|dbj|GAA21021.1| ClpB protein [Pseudomonas aeruginosa NCMG1179]
 gi|347307000|gb|AEO77114.1| ClpB protein [Pseudomonas aeruginosa M18]
 gi|348032569|dbj|BAK87929.1| putative ClpA/B-type chaperone [Pseudomonas aeruginosa NCGM2.S1]
 gi|354824206|gb|EHF08460.1| chaperone ClpB [Pseudomonas sp. 2_1_26]
 gi|375046270|gb|EHS38835.1| clpB protein [Pseudomonas aeruginosa MPAO1/P1]
 gi|375050967|gb|EHS43442.1| clpB protein [Pseudomonas aeruginosa MPAO1/P2]
 gi|384401664|gb|EIE48018.1| clpB protein [Pseudomonas aeruginosa PADK2_CF510]
 gi|392321710|gb|AFM67090.1| clpB protein [Pseudomonas aeruginosa DK2]
 gi|404346081|gb|EJZ72432.1| putative ClpA/B-type chaperone [Pseudomonas aeruginosa PAO579]
 gi|404519555|gb|EKA30289.1| ClpB protein [Pseudomonas aeruginosa ATCC 14886]
 gi|404523842|gb|EKA34234.1| ClpB protein [Pseudomonas aeruginosa ATCC 700888]
 gi|404530437|gb|EKA40437.1| ClpB protein [Pseudomonas aeruginosa CI27]
 gi|451759229|emb|CCQ83913.1| ClpB protein [Pseudomonas aeruginosa 18A]
 gi|453046121|gb|EME93838.1| clpB protein [Pseudomonas aeruginosa PA21_ST175]
          Length = 854

 Score =  821 bits (2121), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/621 (61%), Positives = 512/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+   +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELGKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVSITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE+++K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++++I KLE +YA+LE+IWK EK  ++ S QI+++IE+ + ++  A RK D ++++
Sbjct: 440 RLAKLEEDIVKLEREYADLEEIWKSEKAEVQGSAQIQQKIEQAKQEMEAARRKGDLESMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++Y  +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 RIQYQTIPDLERSLQMVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQDEA+ AVSNA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHRRVIGQDEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+G+EEGGYLTE +RRKPYS+
Sbjct: 614 LCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGFEEGGYLTEAIRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+  GD+
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQEL-AGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID+++VF  L R+ I  IA IQL  L+ +L +  + L+
Sbjct: 733 EAQRAAVMDAVNAHFRPEFINRIDEVVVFEPLAREQIAGIAEIQLGRLRKRLAERELSLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ AL K+  +GFD +YGAR
Sbjct: 793 LSQEALDKLIAVGFDPVYGAR 813


>gi|170723706|ref|YP_001751394.1| ATP-dependent chaperone ClpB [Pseudomonas putida W619]
 gi|169761709|gb|ACA75025.1| ATP-dependent chaperone ClpB [Pseudomonas putida W619]
          Length = 854

 Score =  821 bits (2121), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/621 (61%), Positives = 509/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQFIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLTEEIERLEREYSDLEEIWASEKAEVQGSAQIQQKIEQARQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPV+K+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+LL +RV+GQ EA++AV+NA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GEREKLLKMEDLLHQRVIGQHEAVTAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 VLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-AGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEF+NRID+++VF  L R+ I  I  IQL  L+++L +  + L 
Sbjct: 733 EAQRAAVMDAVGAHFRPEFVNRIDEVVVFEPLGREQIAGITEIQLGRLRSRLSERELALS 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLIAVGYDPVYGAR 813


>gi|421484387|ref|ZP_15931956.1| chaperone protein ClpB [Achromobacter piechaudii HLE]
 gi|400197306|gb|EJO30273.1| chaperone protein ClpB [Achromobacter piechaudii HLE]
          Length = 868

 Score =  821 bits (2120), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/625 (63%), Positives = 513/625 (82%), Gaps = 4/625 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP SL  K++L LD+A LLAG K+RGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPESLRGKRVLSLDLAALLAGAKFRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+  +    I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLKELGQDDGSNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVDEPDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEA A+I++EIDSKPE+MDKL+RR+IQLKIE EA+K+E D++SK+
Sbjct: 379 YITDRFLPDKAIDLIDEAGARIRMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDDASKR 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I+ E+ KL+ +Y + E+IWK EK  ++ +Q IKEEI+ VR ++ +  RK  +  ++
Sbjct: 439 RLGVIEDELEKLQREYNDFEEIWKAEKAAVQGTQAIKEEIDSVRAEMAELQRKGQFDKLA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNA----NKFTLLKTKVGSEEIAEIVSRTTGIPVS 369
           +L+YG+L  LE  LK       Q   NA    ++  LL+T+VG+EEIAE+VSR TGIPVS
Sbjct: 499 ELQYGKLPDLESRLKAAEVGAAQAAENAEGDESRPRLLRTRVGAEEIAEVVSRATGIPVS 558

Query: 370 KIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGV 429
           K++Q EREKLL++E  L KRVVGQDEA+  VS+AIRRSR+GL+D  RPYGSF+FLGPTGV
Sbjct: 559 KMMQGEREKLLHMEEFLHKRVVGQDEAVRLVSDAIRRSRAGLADPARPYGSFLFLGPTGV 618

Query: 430 GKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRK 489
           GKTEL + L+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRK
Sbjct: 619 GKTELTRALAEFMFDSEEHLIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRK 678

Query: 490 PYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME 549
           PYS+ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I+ + 
Sbjct: 679 PYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHHIQSLA 738

Query: 550 KGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
               +++K  V  E+K   RPEF+NRID+++VF  L  ++I SIA IQL  L  +L K  
Sbjct: 739 GQPYDVVKEVVWGELKQTLRPEFLNRIDEVVVFHGLEAQHIESIARIQLRRLGARLEKQE 798

Query: 610 MDLKISKAALKKISNIGFDLIYGAR 634
           M L+++++AL +++  GFD ++GAR
Sbjct: 799 MRLEVTESALAELARSGFDPVFGAR 823


>gi|417558810|ref|ZP_12209770.1| ATPase [Xylella fastidiosa EB92.1]
 gi|338178645|gb|EGO81630.1| ATPase [Xylella fastidiosa EB92.1]
          Length = 859

 Score =  821 bits (2120), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/672 (58%), Positives = 531/672 (79%), Gaps = 16/672 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L SK++L LD+  L+AG K+RGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLRSKRLLSLDLGALIAGAKFRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ N+  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 258 KGVLNDLAKNEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL++KY +HHGVEITDPAIVAA+ LS R
Sbjct: 318 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKEKYALHHGVEITDPAIVAAATLSNR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+SK+
Sbjct: 378 YITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASKQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL+ ++++I  L+ ++++LE++W+ EK  ++ + +IKE IE+ +L +  A R+ D+  +S
Sbjct: 438 RLVDLERDIEVLDREFSDLEEVWRSEKAALQGATKIKESIEQAKLDLEAAQRRQDYAKMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG L  LE+ L   SQ +       + FTL++ KV +EEIAE+VSR TGIPVSK+++
Sbjct: 498 EIQYGVLPALEKQLVAASQAE------QHDFTLVQEKVTAEEIAEVVSRWTGIPVSKMLE 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RVVGQDEAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GERDKLLRMEADLGRRVVGQDEAIKVVSDAVRRSRTGLSDPNRPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE+VRR+PYSL
Sbjct: 612 LCKALAEFLFDSQDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTELVRRRPYSL 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+   D 
Sbjct: 672 ILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDS 731

Query: 554 EII----KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
             +    K AVM  V+ +FRPEFINR+DDI+VF  L++  I  IA IQL  L+ +L +  
Sbjct: 732 PEVYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKQIARIQLRGLEKRLAESE 791

Query: 610 MDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKG 669
           + L +   AL+ + N+GFD +YGAR +   K+++   L+    +   A     GD +  G
Sbjct: 792 LKLDLDDRALELLGNVGFDPVYGARPL---KRAIQSQLENALAQQILAGAFVSGDTVQVG 848

Query: 670 PQSLDTLRMVYS 681
              +D  ++V+S
Sbjct: 849 ---VDGGKLVFS 857


>gi|422666963|ref|ZP_16726829.1| AAA ATPase, central region [Pseudomonas syringae pv. aptata str.
           DSM 50252]
 gi|330977495|gb|EGH77441.1| AAA ATPase, central region [Pseudomonas syringae pv. aptata str.
           DSM 50252]
          Length = 854

 Score =  821 bits (2120), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/621 (62%), Positives = 506/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSPR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI +LE++YA+LE+IW  EK  +  S QI+++IE+ R ++  A R+ D   ++
Sbjct: 440 RLEKLQGEIERLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL  RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GEREKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSL
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEF+NRID++++F  L R  I  I +IQL  L+ +L +  + + 
Sbjct: 733 EAQRAAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGPLRKRLAERELSMT 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLIAVGYDPVYGAR 813


>gi|440739028|ref|ZP_20918550.1| chaperone [Pseudomonas fluorescens BRIP34879]
 gi|440380400|gb|ELQ16967.1| chaperone [Pseudomonas fluorescens BRIP34879]
          Length = 854

 Score =  821 bits (2120), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/621 (62%), Positives = 511/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDDAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIQRLEREYSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKAENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLLKMESLLHQRVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+ +L +  + L+
Sbjct: 733 EAQRAAVMDALTTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRGRLAERELSLQ 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ AL K+  +G+D +YGAR
Sbjct: 793 LSREALDKLIAVGYDPVYGAR 813


>gi|302185257|ref|ZP_07261930.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal
           [Pseudomonas syringae pv. syringae 642]
          Length = 854

 Score =  821 bits (2120), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/621 (62%), Positives = 507/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGSLIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI +LE++YA+LE+IW  EK  +  S QI+++IE+ R ++  A R+ D   ++
Sbjct: 440 RLEKLQGEIERLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL  RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GEREKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSL
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEF+NRID++++F  L R  I  I +IQL  L+ +L +  + + 
Sbjct: 733 EAQRAAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELSMT 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLIAVGYDPVYGAR 813


>gi|423097380|ref|ZP_17085176.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens
           Q2-87]
 gi|397885254|gb|EJL01737.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens
           Q2-87]
          Length = 854

 Score =  821 bits (2120), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/621 (62%), Positives = 511/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI + E +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLERLQEEILRHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  ++  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+LL +RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLLKMESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSTQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  + L+
Sbjct: 733 EAQRAAVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLQ 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSDEALDKLIAVGYDPVYGAR 813


>gi|424065893|ref|ZP_17803366.1| clpB protein [Pseudomonas syringae pv. avellanae str. ISPaVe013]
 gi|408002911|gb|EKG43137.1| clpB protein [Pseudomonas syringae pv. avellanae str. ISPaVe013]
          Length = 854

 Score =  820 bits (2119), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/621 (62%), Positives = 507/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEVQALKKEKDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI +LE++YA+LE+IW  EK  +  S QI+++IE+ R ++  A R+ D   ++
Sbjct: 440 RLEKLQGEIERLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL  RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GEREKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSL
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEF+NRID++++F  L R  I  I +IQL  L+ +L +  + + 
Sbjct: 733 EAQRAAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELSMT 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLIAVGYDPVYGAR 813


>gi|152985423|ref|YP_001350513.1| ATP-dependent chaperone ClpB [Pseudomonas aeruginosa PA7]
 gi|150960581|gb|ABR82606.1| ATP-dependent chaperone ClpB [Pseudomonas aeruginosa PA7]
          Length = 854

 Score =  820 bits (2119), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/621 (61%), Positives = 511/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+   +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELGKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVSITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE+++K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++++I KLE +YA+LE+IWK EK  ++ S QI+++IE+ + ++  A RK D ++++
Sbjct: 440 RLAKLEEDIVKLEREYADLEEIWKSEKAEVQGSAQIQQKIEQAKQEMEAARRKGDLESMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++Y  +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 RIQYQTIPDLERSLQMVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQDEA+ AVSNA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHRRVIGQDEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+G+EEGGYLTE +RRKPYS+
Sbjct: 614 LCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGFEEGGYLTEAIRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+  GD+
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQEL-AGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID+++VF  L R+ I  IA IQL  L+ +L +  + L 
Sbjct: 733 EAQRAAVMDAVNAHFRPEFINRIDEVVVFEPLAREQIAGIAEIQLGRLRKRLAERELSLD 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ AL K+  +GFD +YGAR
Sbjct: 793 LSQEALDKLIAVGFDPVYGAR 813


>gi|345870658|ref|ZP_08822609.1| ATP-dependent chaperone ClpB [Thiorhodococcus drewsii AZ1]
 gi|343921471|gb|EGV32187.1| ATP-dependent chaperone ClpB [Thiorhodococcus drewsii AZ1]
          Length = 865

 Score =  820 bits (2119), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/657 (59%), Positives = 526/657 (80%), Gaps = 10/657 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+A L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKTKRLLSLDMAALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDVARQEGNVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKDAA ERRFQK+LV+EP++E+T++ILRGL+++YEVHH VEITDPAIVAA+ LS+R
Sbjct: 320 RKYVEKDAALERRFQKVLVDEPNVEDTVAILRGLKERYEVHHAVEITDPAIVAAAVLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDS PE MD+L+RRLIQLKIE EA+K+E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASQIRMEIDSMPEEMDRLDRRLIQLKIEREAVKKETDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I +LE ++++L++IWK EK   + +  IKE +++VRL++  A R  DW  +S
Sbjct: 440 RLTDLQGQIERLEREFSDLDEIWKSEKAASQGNAHIKEALDRVRLEMETARRAGDWARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +  D++   N     LL++KV  EEIA+IVS+ TGIPVS++++
Sbjct: 500 ELQYGRIPELEKQL--ATSADVEKGEN----RLLRSKVTEEEIADIVSKWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  + +RVVGQ+EA+ AVS+AIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQAIEQRVVGQNEAVRAVSDAIRRSRAGLSDPARPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RR+PYSL
Sbjct: 614 LCKSLASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRN +IVMTSNLGSD I++M   D 
Sbjct: 674 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNAVIVMTSNLGSDVIQQMAGEDN 733

Query: 554 EI-IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K AVM  V   FRPEFINR+D+I+VF  L R  I +IA IQ++ L+ +L + +M L
Sbjct: 734 YAEMKDAVMEVVSHAFRPEFINRLDEIVVFHPLQRAQIRAIARIQIDYLQKRLAERDMKL 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKG 669
            ++ AAL  +   GFD +YGAR +   K+++   L+    +   +     GDLI  G
Sbjct: 794 AVNDAALDHLGEAGFDPVYGARPL---KRAIRAQLENPLAQEILSGKFAPGDLIEVG 847


>gi|410092213|ref|ZP_11288746.1| clpB protein [Pseudomonas viridiflava UASWS0038]
 gi|409760455|gb|EKN45601.1| clpB protein [Pseudomonas viridiflava UASWS0038]
          Length = 854

 Score =  820 bits (2119), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/621 (62%), Positives = 508/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I +LE++YA+LE+IW  EK  +  S QI+++IE+ R ++  A R+ D   ++
Sbjct: 440 RLDKLQDDIQRLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL  RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GEREKLLKMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID++++F  L R  I  I +IQL+ L+ +L +  + L 
Sbjct: 733 EAQRAAVMDAVSTHFRPEFINRIDEVVIFEPLARDQIAGITDIQLDRLRKRLTERELSLT 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLIAVGYDPVYGAR 813


>gi|66043993|ref|YP_233834.1| ATPase AAA [Pseudomonas syringae pv. syringae B728a]
 gi|63254700|gb|AAY35796.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal
           [Pseudomonas syringae pv. syringae B728a]
          Length = 854

 Score =  820 bits (2119), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/621 (62%), Positives = 507/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI +LE++YA+LE+IW  EK  +  S QI+++IE+ R ++  A R+ D   ++
Sbjct: 440 RLEKLQGEIERLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E LL  RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSL
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEF+NRID++++F  L R  I  I +IQL  L+ +L +  + + 
Sbjct: 733 EAQRAAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELSMT 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLIAVGYDPVYGAR 813


>gi|402698425|ref|ZP_10846404.1| ATP-dependent chaperone protein ClpB [Pseudomonas fragi A22]
          Length = 855

 Score =  820 bits (2119), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/621 (61%), Positives = 513/621 (82%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LDI  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDIGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELH M+G GK EG++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KALLNELSKQEGQIILFIDELHVMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEEDEAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A R  +   ++
Sbjct: 440 RLEKLQEEIERLEREYSDLEEIWTSEKAEVQGSAQIQQKIEQARQELEVARRSGNLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   +   +  N      LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDEHSSKTENQ-----LLRSKVTEEEIAEVVSKWTGIPVSKMLE 554

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KL+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 555 GERDKLMKMESLLHERVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 614

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 615 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 674

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 675 ILLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEF+NRID++++F  L R  I  IA IQL+ L+++L + ++ L+
Sbjct: 734 EAQRAAVMDAVSTHFRPEFVNRIDEVVIFEPLARDQIAGIAEIQLSRLRSRLAERDLSLE 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           + K AL+K+  +G+D +YGAR
Sbjct: 794 LDKDALEKLIAVGYDPVYGAR 814


>gi|289674876|ref|ZP_06495766.1| AAA ATPase, central region:Clp, N terminal:Clp, N terminal, partial
           [Pseudomonas syringae pv. syringae FF5]
          Length = 663

 Score =  820 bits (2118), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/621 (62%), Positives = 507/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 9   NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERL 68

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 69  KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 128

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 129 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 188

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 189 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIK 248

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI +LE++YA+LE+IW  EK  +  S QI+++IE+ R ++  A R+ D   ++
Sbjct: 249 RLEKLQGEIERLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMA 308

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 309 ELQYGIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 362

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL  RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 363 GEREKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 422

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSL
Sbjct: 423 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSL 482

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 483 ILLDEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 541

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEF+NRID++++F  L R  I  I +IQL  L+ +L +  + + 
Sbjct: 542 EAQRAAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELSMT 601

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 602 LSPEALDKLIAVGYDPVYGAR 622


>gi|330811801|ref|YP_004356263.1| chaperone [Pseudomonas brassicacearum subsp. brassicacearum NFM421]
 gi|378952908|ref|YP_005210396.1| chaperone ClpB [Pseudomonas fluorescens F113]
 gi|423699369|ref|ZP_17673859.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens
           Q8r1-96]
 gi|327379909|gb|AEA71259.1| Chaperone [Pseudomonas brassicacearum subsp. brassicacearum NFM421]
 gi|359762922|gb|AEV65001.1| ClpB [Pseudomonas fluorescens F113]
 gi|387997271|gb|EIK58601.1| ATP-dependent chaperone protein ClpB [Pseudomonas fluorescens
           Q8r1-96]
          Length = 854

 Score =  820 bits (2118), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/621 (62%), Positives = 511/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KALLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI + E +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLERLQEEIVRHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  ++  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+LL +RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLLKMESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSTQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  + L+
Sbjct: 733 EAQRAAVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLQ 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSDEALDKLIAVGYDPVYGAR 813


>gi|28199560|ref|NP_779874.1| ATP-dependent Clp protease subunit [Xylella fastidiosa Temecula1]
 gi|182682296|ref|YP_001830456.1| ATP-dependent chaperone ClpB [Xylella fastidiosa M23]
 gi|386083626|ref|YP_005999908.1| ATP-dependent chaperone ClpB [Xylella fastidiosa subsp. fastidiosa
           GB514]
 gi|54035830|sp|Q87AX8.1|CLPB_XYLFT RecName: Full=Chaperone protein ClpB
 gi|28057675|gb|AAO29523.1| ATP-dependent Clp protease subunit [Xylella fastidiosa Temecula1]
 gi|182632406|gb|ACB93182.1| ATP-dependent chaperone ClpB [Xylella fastidiosa M23]
 gi|307578573|gb|ADN62542.1| ATP-dependent chaperone ClpB [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 861

 Score =  820 bits (2118), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/672 (58%), Positives = 531/672 (79%), Gaps = 16/672 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L SK++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLRSKRLLSLDLGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ N+  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKNEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL++KY +HHGVEITDPAIVAA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKEKYALHHGVEITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+SK+
Sbjct: 380 YITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASKQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL+ ++++I  L+ ++++LE++W+ EK  ++ + +IKE IE+ +L +  A R+ D+  +S
Sbjct: 440 RLVDLERDIEVLDREFSDLEEVWRSEKAALQGATKIKESIEQAKLDLEAAQRRQDYAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG L  LE+ L   SQ +       + FTL++ KV +EEIAE+VSR TGIPVSK+++
Sbjct: 500 EIQYGVLPALEKQLVAASQAE------QHDFTLVQEKVTAEEIAEVVSRWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RVVGQDEAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEADLGRRVVGQDEAIKVVSDAVRRSRTGLSDPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE+VRR+PYSL
Sbjct: 614 LCKALAEFLFDSQDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTELVRRRPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+   D 
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDS 733

Query: 554 EII----KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
             +    K AVM  V+ +FRPEFINR+DDI+VF  L++  I  IA IQL  L+ +L +  
Sbjct: 734 PEVYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKQIARIQLRGLEKRLAESE 793

Query: 610 MDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKG 669
           + L +   AL+ + N+GFD +YGAR +   K+++   L+    +   A     GD +  G
Sbjct: 794 LKLDLDDRALELLGNVGFDPVYGARPL---KRAIQSQLENALAQQILAGAFVSGDTVQVG 850

Query: 670 PQSLDTLRMVYS 681
              +D  ++V+S
Sbjct: 851 ---VDGGKLVFS 859


>gi|333982395|ref|YP_004511605.1| ATP-dependent chaperone ClpB [Methylomonas methanica MC09]
 gi|333806436|gb|AEF99105.1| ATP-dependent chaperone ClpB [Methylomonas methanica MC09]
          Length = 857

 Score =  820 bits (2118), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/622 (62%), Positives = 512/622 (82%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  +  K++L LD+A L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGIKGKQLLSLDMAALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDLAKMEGQVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP++E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPNVEDTIAILRGLKERYEIHHSVDITDPAIVAAAMLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA++I++E+DSKPE MDKL+RRLIQLKIE EA+K E D +SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAASRIRMEMDSKPEAMDKLDRRLIQLKIEREAMKNESDAASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++++I +LE +Y++L++IWK EK  ++ +  IKE +E  RL++  A R  D+  +S
Sbjct: 440 RLEILQEDIAELEKEYSDLDEIWKAEKAALQGTATIKERLEHARLELEAARRSQDYTRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGE+ KLE+ L   SQ ++Q        TLL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGEIPKLEKELDLASQAEMQ------DTTLLRSKVTEEEIAEVVSKWTGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L KRV+GQ EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEEELGKRVIGQTEALKAVSNAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFMFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA++DVFN+LLQ+LDDGRLTD +GRT++FRNT++VMTSNLGS  I+E+   + 
Sbjct: 674 ILLDEIEKAHADVFNVLLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSSVIQELSGEEN 733

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K AVM+ V  +FRPEFINR+D+ +VF  L +  I +I  IQ+ +L  +L + +M+L
Sbjct: 734 YNTMKDAVMDIVGQHFRPEFINRVDEAVVFHPLGQGQIRAICKIQIELLLRRLQEKDMNL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S++AL  +   GFD +YGAR
Sbjct: 794 EVSESALDLLGEAGFDPVYGAR 815


>gi|298160065|gb|EFI01097.1| ClpB protein [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
          Length = 854

 Score =  820 bits (2118), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/621 (62%), Positives = 507/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++E+ +LE +YA+LE+IW  EK  +  S QI+++IE+ R ++  A R+ D   ++
Sbjct: 440 RLEKLQEEVVRLEKEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL  RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GEREKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSL
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEF+NRID++++F  L R  I  I +IQL  L+ +L +  + L 
Sbjct: 733 EAQRAAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELALT 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLIAVGYDPVYGAR 813


>gi|71736209|ref|YP_273034.1| clpB protein [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|257481615|ref|ZP_05635656.1| clpB protein [Pseudomonas syringae pv. tabaci str. ATCC 11528]
 gi|289627152|ref|ZP_06460106.1| clpB protein [Pseudomonas syringae pv. aesculi str. NCPPB 3681]
 gi|416014082|ref|ZP_11562002.1| clpB protein [Pseudomonas syringae pv. glycinea str. B076]
 gi|416024302|ref|ZP_11568434.1| clpB protein [Pseudomonas syringae pv. glycinea str. race 4]
 gi|422584377|ref|ZP_16659487.1| clpB protein [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|422598531|ref|ZP_16672791.1| clpB protein [Pseudomonas syringae pv. lachrymans str. M301315]
 gi|422679424|ref|ZP_16737698.1| clpB protein [Pseudomonas syringae pv. tabaci str. ATCC 11528]
 gi|71556762|gb|AAZ35973.1| clpB protein [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|320326251|gb|EFW82305.1| clpB protein [Pseudomonas syringae pv. glycinea str. B076]
 gi|320330675|gb|EFW86652.1| clpB protein [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330869194|gb|EGH03903.1| clpB protein [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330988808|gb|EGH86911.1| clpB protein [Pseudomonas syringae pv. lachrymans str. M301315]
 gi|331008772|gb|EGH88828.1| clpB protein [Pseudomonas syringae pv. tabaci str. ATCC 11528]
          Length = 854

 Score =  820 bits (2118), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/621 (62%), Positives = 507/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++E+ +LE +YA+LE+IW  EK  +  S QI+++IE+ R ++  A R+ D   ++
Sbjct: 440 RLEKLQEEVVRLEKEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL  RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GEREKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSL
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEF+NRID++++F  L R  I  I +IQL  L+ +L +  + L 
Sbjct: 733 EAQRAAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELALT 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLIAVGYDPVYGAR 813


>gi|420138348|ref|ZP_14646277.1| ClpB protein [Pseudomonas aeruginosa CIG1]
 gi|421162907|ref|ZP_15621700.1| ClpB protein [Pseudomonas aeruginosa ATCC 25324]
 gi|403248928|gb|EJY62455.1| ClpB protein [Pseudomonas aeruginosa CIG1]
 gi|404532674|gb|EKA42547.1| ClpB protein [Pseudomonas aeruginosa ATCC 25324]
          Length = 854

 Score =  820 bits (2117), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/621 (61%), Positives = 511/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+   +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELGKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVSITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE+++K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++++I KLE +YA+LE IWK EK  ++ S QI+++IE+ + ++  A RK D ++++
Sbjct: 440 RLAKLEEDIVKLEREYADLEDIWKSEKAEVQGSAQIQQKIEQAKQEMEAARRKGDLESMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++Y  +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 RIQYQTIPDLERSLQMVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQDEA+ AVSNA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHRRVIGQDEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+G+EEGGYLTE +RRKPYS+
Sbjct: 614 LCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGFEEGGYLTEAIRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+  GD+
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQEL-AGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID+++VF  L R+ I  IA IQL  L+ +L +  + L+
Sbjct: 733 EAQRAAVMDAVNAHFRPEFINRIDEVVVFEPLAREQIAGIAEIQLGRLRKRLAERELSLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ AL K+  +GFD +YGAR
Sbjct: 793 LSQEALDKLIAVGFDPVYGAR 813


>gi|452876832|ref|ZP_21954166.1| ATP-dependent chaperone ClpB [Pseudomonas aeruginosa VRFPA01]
 gi|452186377|gb|EME13395.1| ATP-dependent chaperone ClpB [Pseudomonas aeruginosa VRFPA01]
          Length = 774

 Score =  820 bits (2117), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/621 (61%), Positives = 511/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 120 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERL 179

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+   +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 180 KAVLNELGKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 239

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+R
Sbjct: 240 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVSITDGAIIAAAKLSHR 299

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE+++K
Sbjct: 300 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATRK 359

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++++I KLE +YA+LE+IWK EK  ++ S QI+++IE+ + ++  A RK D ++++
Sbjct: 360 RLAKLEEDIVKLEREYADLEEIWKSEKAEVQGSAQIQQKIEQAKQEMEAARRKGDLESMA 419

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++Y  +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 420 RIQYQTIPDLERSLQMVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPVSKMLE 473

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQDEA+ AVSNA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 474 GEREKLLRMEQELHRRVIGQDEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTE 533

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+G+EEGGYLTE +RRKPYS+
Sbjct: 534 LCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGFEEGGYLTEAIRRKPYSV 593

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+  GD+
Sbjct: 594 VLLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQEL-AGDR 652

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID+++VF  L R+ I  IA IQL  L+ +L +  + L 
Sbjct: 653 EAQRAAVMDAVNAHFRPEFINRIDEVVVFEPLAREQIAGIAEIQLGRLRKRLAERELSLD 712

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ AL K+  +GFD +YGAR
Sbjct: 713 LSQEALGKLIAVGFDPVYGAR 733


>gi|398848122|ref|ZP_10604958.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM84]
 gi|398249906|gb|EJN35274.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM84]
          Length = 854

 Score =  819 bits (2116), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/621 (61%), Positives = 510/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KGLLNELSKQEGQIILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQFIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLTEEIERLEREYSDLEEIWASEKAEVQGSAQIQQKIEQARQELETARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPV+K+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+LL +RV+GQ+EA++AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLKMEDLLHQRVIGQNEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 VLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEF+NRID+++VF  L R  I  I  IQL  L+++LL+  + L 
Sbjct: 733 EAQRAAVMDAVGSHFRPEFVNRIDEVVVFEPLGRDQIAGITEIQLGRLRSRLLERELALS 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLIAVGYDPVYGAR 813


>gi|409417475|ref|ZP_11257524.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
           sp. HYS]
          Length = 854

 Score =  819 bits (2116), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/620 (62%), Positives = 508/620 (81%), Gaps = 7/620 (1%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG K+RGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKFRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYR
Sbjct: 261 ALLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           QYIEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+RY
Sbjct: 321 QYIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ KR
Sbjct: 381 ITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKEDDEAAIKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L  + +EI +LE +YA+LE++W  EK  ++ S QI+++IE+ R ++  A RK D   +++
Sbjct: 441 LEKLTEEIARLEREYADLEEVWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLSRMAE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPVSK+++ 
Sbjct: 501 LQYGVIPDLERSLQMVDQ------HGKAENQLLRNKVTEEEIAEVVSKWTGIPVSKMLEG 554

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           EREKLL +E+LL +RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTEL
Sbjct: 555 EREKLLKMESLLHERVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTEL 614

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++
Sbjct: 615 CKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVV 674

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+E
Sbjct: 675 LLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSSQIQEL-VGDRE 733

Query: 555 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 614
             + AVM+ V  +FRPEFINRID+++VF  L R+ I  I  IQL  L+++L +  + L++
Sbjct: 734 AQRAAVMDAVGSHFRPEFINRIDEVVVFEPLGREQIAGITQIQLGRLRSRLTERELSLEL 793

Query: 615 SKAALKKISNIGFDLIYGAR 634
           S  AL K+  +G+D +YGAR
Sbjct: 794 SPEALDKLIAVGYDPVYGAR 813


>gi|92112632|ref|YP_572560.1| ATPase AAA-2 [Chromohalobacter salexigens DSM 3043]
 gi|91795722|gb|ABE57861.1| ATPase AAA-2 [Chromohalobacter salexigens DSM 3043]
          Length = 860

 Score =  819 bits (2115), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/622 (61%), Positives = 511/622 (82%), Gaps = 6/622 (0%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  LLAG KYRGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKDKRVLALDMGSLLAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L E++  +  +I+F+DELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 261 AVLGELAKEEGRVILFVDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           Q+IEKDAA ERRFQK+LV+EP+ E+T++ILRGL+++YEVHHGV+ITD AI+AA++LS RY
Sbjct: 321 QHIEKDAALERRFQKVLVDEPNEEDTVAILRGLKERYEVHHGVDITDGAIIAAAKLSTRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DR +PDKAIDLIDEAA++I++E+DS PE MD+L+RRLIQLK+E EA+K+E DE++KKR
Sbjct: 381 ITDRQLPDKAIDLIDEAASRIRMELDSMPEEMDRLDRRLIQLKMEREALKKETDEATKKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L  ++ +I  LE +YA+LE++WK EK  I+ + Q K E+E+ R+ +  A R+ D   +S+
Sbjct: 441 LDSLEAQIESLEREYADLEEVWKAEKASIQGAAQFKAELEQARIDLEAARRQGDLGRMSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG + KLE+ + E S+++     +  K  LL++ V  EEIAE+VSR TGIPVSK+++ 
Sbjct: 501 LQYGVIPKLEKQIAEASEQE----TDTAKHQLLRSNVTEEEIAEVVSRWTGIPVSKMLEG 556

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           ER+KLL +E  L +RV+GQDEA++AV+NA+RRSR+GL+D  RP GSF+FLGPTGVGKTEL
Sbjct: 557 ERDKLLRMEEALHERVIGQDEAVTAVANAVRRSRAGLADPGRPNGSFLFLGPTGVGKTEL 616

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK+L++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS++
Sbjct: 617 CKSLASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVL 676

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKGD 552
           LLDE+EKA++DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGSD I+ M  +  D
Sbjct: 677 LLDEVEKAHADVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSDIIQRMGGDDAD 736

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              ++ AVM  V  +FRPE INRID+++VF  L ++ I SIA IQL  LK +L +  + L
Sbjct: 737 YGAMRDAVMGVVGDHFRPELINRIDEVVVFHALGQEQIQSIAGIQLERLKARLAEREIRL 796

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S  AL +++ +GFD ++GAR
Sbjct: 797 EVSDDALAQLAVVGFDPVFGAR 818


>gi|422674213|ref|ZP_16733568.1| AAA ATPase, central region [Pseudomonas syringae pv. aceris str.
           M302273]
 gi|330971942|gb|EGH72008.1| AAA ATPase, central region [Pseudomonas syringae pv. aceris str.
           M302273]
          Length = 854

 Score =  818 bits (2114), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/621 (62%), Positives = 507/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGSLIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI +LE++YA+LE+IW  EK  +  S QI+++IE+ R ++  A R+ D   ++
Sbjct: 440 RLEKLQGEIERLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E LL  RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSL
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEF+NRID++++F  L R  I  I +IQL  L+ +L +  + + 
Sbjct: 733 EAQRAAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELSMT 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++  AL K+  +G+D +YGAR
Sbjct: 793 LTPEALDKLIAVGYDPVYGAR 813


>gi|395650246|ref|ZP_10438096.1| chaperone [Pseudomonas extremaustralis 14-3 substr. 14-3b]
          Length = 854

 Score =  818 bits (2114), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/621 (61%), Positives = 512/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIVRLEREYSDLEEIWSAEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+  +Q      +  ++  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVAQ------HGHSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KL+ +E+LL +RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLMKMESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSMQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+ +L +  + L+
Sbjct: 733 EAQRAAVMDALTTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRARLAERELSLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSTEALDKLIAVGYDPVYGAR 813


>gi|447915151|ref|YP_007395719.1| chaperone [Pseudomonas poae RE*1-1-14]
 gi|445199014|gb|AGE24223.1| chaperone [Pseudomonas poae RE*1-1-14]
          Length = 854

 Score =  818 bits (2113), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/621 (61%), Positives = 510/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDDAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIQRLEREYSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKAENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RV+GQDEA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLLKMESQLHQRVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+ +L +  + L+
Sbjct: 733 EAQRAAVMDALTTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRGRLAERELSLQ 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ AL K+  +G+D +YGAR
Sbjct: 793 LSREALDKLIAVGYDPVYGAR 813


>gi|344941214|ref|ZP_08780502.1| ATP-dependent chaperone ClpB [Methylobacter tundripaludum SV96]
 gi|344262406|gb|EGW22677.1| ATP-dependent chaperone ClpB [Methylobacter tundripaludum SV96]
          Length = 858

 Score =  818 bits (2113), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/655 (60%), Positives = 519/655 (79%), Gaps = 17/655 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  +  K++L LD+A L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKGKRVLALDMAALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDLAKQEGQVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKDAA ERRFQK+LV+EP +E+TI+ILRGL++KYEVHHGV+ITDPAI+AA+ LSYR
Sbjct: 320 RKYVEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYEVHHGVDITDPAIIAAANLSYR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE MDKL RRLIQLKIE  A+K+E D +SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASRIRMEIDSKPEEMDKLYRRLIQLKIEQVALKKEKDAASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++++EI  LE +Y++LE+IWK EK  ++ S  IKE++E+ + ++  A+R  D   +S
Sbjct: 440 RLEILEEEIADLEKEYSDLEEIWKAEKASLQGSASIKEKLEQAKTELEAASRAGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L         +P  A K TLL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPALEKQLHS------DVPAEAQKMTLLRNKVTEEEIAEVVSKWTGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L KRV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEEQLGKRVIGQEEALKAVSNAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+  ++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE+VRRKPYS+
Sbjct: 614 LCKALAEFMFDTPDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTELVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNTIIVMTSNLGSD I+ +  G+ 
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTIIVMTSNLGSDVIQSL-SGEA 732

Query: 554 --EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
              ++K AVM+ V   FRPEFINRID+ +VF  L R  I +I+ IQ++ L+ +L    + 
Sbjct: 733 LYSVMKNAVMDIVSTKFRPEFINRIDEAVVFHSLGRGQIRAISGIQIDYLRKRLQDREIG 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            +IS+ AL  +   GFD +YGAR +   K+++   L     ++P A  I  GD +
Sbjct: 793 FEISEEALDLLGEAGFDPVYGARPM---KRAIQQQL-----ENPLAQKILAGDFV 839


>gi|71730024|gb|EAO32116.1| AAA ATPase, central region:Clp, N terminal [Xylella fastidiosa
           Ann-1]
          Length = 861

 Score =  818 bits (2112), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/671 (58%), Positives = 530/671 (78%), Gaps = 16/671 (2%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L SK++L LD+  L+AG K+RGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLRSKRLLSLDLGALIAGAKFRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L +++ N+  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR
Sbjct: 261 GVLNDLAKNEGRVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           +YIEKDAA ERRFQK+ V EP +E+TI+ILRGL++KY +HHGVEITDPAIVAA+ LS RY
Sbjct: 321 KYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKEKYALHHGVEITDPAIVAAATLSNRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+SK+R
Sbjct: 381 ITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASKQR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L+ ++++I  L+ ++++LE++W+ EK  ++ + +IKE IE+ +L +  A R+ D+  +S+
Sbjct: 441 LVDLERDIEVLDREFSDLEEVWRSEKAALQGATKIKESIEQAKLDLEAAQRRQDYAKMSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           ++YG L  LE+ L   SQ +       + FTL++ KV +EEIAE+VSR TGIPVSK+++ 
Sbjct: 501 IQYGVLPALEKQLVAASQAE------QHDFTLVQEKVTAEEIAEVVSRWTGIPVSKMLEG 554

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           ER+KLL +E  L +RVVGQDEAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVGKTEL
Sbjct: 555 ERDKLLRMEADLGRRVVGQDEAIKVVSDAVRRSRTGLSDPNRPSGSFLFLGPTGVGKTEL 614

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L+  +F+++++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE+ RR+PYSLI
Sbjct: 615 CKALAEFLFDSQDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTELARRRPYSLI 674

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDE+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+   D  
Sbjct: 675 LLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDSP 734

Query: 555 II----KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNM 610
            +    K AVM  V+++FRPEFINR+DDI+VF  L++  I  IA IQL  L+ +L +  +
Sbjct: 735 EVYTQMKAAVMGVVQVHFRPEFINRLDDIVVFHPLDKAQIKQIARIQLRGLEKRLAESEL 794

Query: 611 DLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGP 670
            L +   AL+ + N+GFD +YGAR +   K+++   L+    +   A     GD +  G 
Sbjct: 795 KLDLDDRALELLGNVGFDPVYGARPL---KRAIQSQLENPLAQQILAGAFVSGDTVQVG- 850

Query: 671 QSLDTLRMVYS 681
             +D  ++V+S
Sbjct: 851 --VDGGKLVFS 859


>gi|254517175|ref|ZP_05129233.1| ATP-dependent chaperone ClpB [gamma proteobacterium NOR5-3]
 gi|219674680|gb|EED31048.1| ATP-dependent chaperone ClpB [gamma proteobacterium NOR5-3]
          Length = 862

 Score =  818 bits (2112), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/622 (62%), Positives = 508/622 (81%), Gaps = 9/622 (1%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQR+INGEVP  L  K+IL LD+  LLAGTK+RGEFE+RLK
Sbjct: 199 NPVLIGEPGVGKTAIVEGLAQRVINGEVPEGLRDKRILSLDLGALLAGTKFRGEFEERLK 258

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L E+S  +  +I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYR
Sbjct: 259 ALLNELSKEEGRVILFIDEIHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLNEYR 318

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           QY+EKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV+ITD AI+AA++LS RY
Sbjct: 319 QYVEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVDITDSAIIAAAQLSQRY 378

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DR +PDKAIDLIDEAA++I++EIDSKPE +D+LERRLIQLKIE EA++++ DES+ K+
Sbjct: 379 ITDRQLPDKAIDLIDEAASRIRMEIDSKPEALDRLERRLIQLKIEREAVRKDEDESAVKQ 438

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L L+  +I  +E ++A+LE+IWK EK  ++ +  IK +IE+++L +  A R  D   +S+
Sbjct: 439 LALLDGQIESIEQEFADLEEIWKAEKASLQGAASIKSDIEQLKLDLETARRAGDLTRMSE 498

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG+L +LE+ L +    +     N  + TLL+ KV  EE+AE+VSR+TGIP+SK+++ 
Sbjct: 499 LQYGKLPELEKQLAQAHAAE-----NVER-TLLRNKVTDEEVAEVVSRSTGIPISKMLEG 552

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           +R+KLL +E+ L  RVVGQ+EA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTEL
Sbjct: 553 DRDKLLRMEDALHDRVVGQNEAVVAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTEL 612

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L+  +F++E++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL+
Sbjct: 613 CKALANFLFDSEQAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLL 672

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK- 553
           LLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+E+  GD+ 
Sbjct: 673 LLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIQEL-AGDEN 731

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E +K AVM  V  +FRPEF+NRID+ +VF  L ++ I  IA IQL  L+ +L   +M L
Sbjct: 732 YEAMKSAVMGVVSQHFRPEFVNRIDETVVFHPLLQEQIRGIATIQLAGLRARLAGRDMQL 791

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +IS A + ++   GFD +YGAR
Sbjct: 792 EISDAFMDQLVEGGFDPVYGAR 813


>gi|226943326|ref|YP_002798399.1| ATP-dependent protease [Azotobacter vinelandii DJ]
 gi|226718253|gb|ACO77424.1| ATP-dependent protease [Azotobacter vinelandii DJ]
          Length = 854

 Score =  818 bits (2112), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/621 (61%), Positives = 513/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLRDKRLLALDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKETDEATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++++I KLE +YA+LE+IWK EK  ++ S QI++++E+ +L +  A RK D   ++
Sbjct: 440 RLAKLEEDIAKLEREYADLEEIWKSEKAEVQGSAQIQQQLEQAKLDLEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L   +  D   P       LL+ +V  EEIAE+VS+ TGIPV+K+++
Sbjct: 500 ELQYGLIPELERKL---ASADGGQPRENQ---LLRNRVTDEEIAEVVSKWTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL +RV+GQ+EA++AV+NA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLKMEELLHQRVIGQNEAVTAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L+DE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT++VMTSNLGS +I+E+  GD+
Sbjct: 674 VLMDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVVVMTSNLGSAQIQEL-AGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID+++VF  L R+ I  IA IQL  L+ +L +  + L+
Sbjct: 733 EAQRAAVMDAVSHHFRPEFINRIDEVVVFDPLAREQIAGIAEIQLKRLRQRLAERELSLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSDEALDKLIAVGYDPVYGAR 813


>gi|229588328|ref|YP_002870447.1| chaperone [Pseudomonas fluorescens SBW25]
 gi|229360194|emb|CAY47051.1| chaperone [Pseudomonas fluorescens SBW25]
          Length = 854

 Score =  818 bits (2112), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/621 (61%), Positives = 511/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDDAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIVRLEREYSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  ++  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+LL +RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLLKMESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+ +L +  + L 
Sbjct: 733 EAQRAAVMDALTTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRGRLTERELSLD 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ AL K+  +G+D +YGAR
Sbjct: 793 LSQEALDKLIAVGYDPVYGAR 813


>gi|312958896|ref|ZP_07773415.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Pseudomonas
           fluorescens WH6]
 gi|311286666|gb|EFQ65228.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Pseudomonas
           fluorescens WH6]
          Length = 854

 Score =  818 bits (2112), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/621 (61%), Positives = 511/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDDAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEILRLEREYSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKAENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+LL +RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLLKMEHLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+ +L +  + L+
Sbjct: 733 EAQRAAVMDALTSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRGRLAERELSLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ AL K+  +G+D +YGAR
Sbjct: 793 LSREALDKLIAVGYDPVYGAR 813


>gi|398931122|ref|ZP_10664981.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM48]
 gi|398164265|gb|EJM52407.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM48]
          Length = 854

 Score =  817 bits (2110), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/621 (61%), Positives = 511/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KALLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI + E +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIARHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  ++  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKL+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GEREKLMKMESLLHQRVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  + L+
Sbjct: 733 EAQRAAVMDAISSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+ K+  +G+D +YGAR
Sbjct: 793 LSPEAMDKLIAVGYDPVYGAR 813


>gi|407368577|ref|ZP_11115109.1| chaperone ClpB [Pseudomonas mandelii JR-1]
          Length = 854

 Score =  816 bits (2109), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/621 (61%), Positives = 512/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIVRLEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  ++  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KL+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLMKMESLLHQRVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  + L+
Sbjct: 733 EAQRAAVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+ K+  +G+D +YGAR
Sbjct: 793 LSPEAMDKLIAVGYDPVYGAR 813


>gi|28868056|ref|NP_790675.1| clpB protein [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213971039|ref|ZP_03399159.1| clpB protein [Pseudomonas syringae pv. tomato T1]
 gi|301384237|ref|ZP_07232655.1| clpB protein [Pseudomonas syringae pv. tomato Max13]
 gi|302059470|ref|ZP_07251011.1| clpB protein [Pseudomonas syringae pv. tomato K40]
 gi|302134988|ref|ZP_07260978.1| clpB protein [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|422296834|ref|ZP_16384494.1| clpB protein [Pseudomonas avellanae BPIC 631]
 gi|422591482|ref|ZP_16666125.1| clpB protein [Pseudomonas syringae pv. morsprunorum str. M302280]
 gi|422659776|ref|ZP_16722198.1| clpB protein [Pseudomonas syringae pv. lachrymans str. M302278]
 gi|54035835|sp|Q889C2.1|CLPB_PSESM RecName: Full=Chaperone protein ClpB
 gi|28851292|gb|AAO54370.1| clpB protein [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213924147|gb|EEB57722.1| clpB protein [Pseudomonas syringae pv. tomato T1]
 gi|330878991|gb|EGH13140.1| clpB protein [Pseudomonas syringae pv. morsprunorum str. M302280]
 gi|331018391|gb|EGH98447.1| clpB protein [Pseudomonas syringae pv. lachrymans str. M302278]
 gi|407991919|gb|EKG33653.1| clpB protein [Pseudomonas avellanae BPIC 631]
          Length = 854

 Score =  816 bits (2109), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/621 (62%), Positives = 507/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI +LE +YA+LE+IW  EK  +  S QI+++IE+ R ++  A R+ D   ++
Sbjct: 440 RLEKLQEEIVRLEKEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL  RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GEREKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEF+NRID++++F  L R  I  I +IQL  L+ +L +  + + 
Sbjct: 733 EAQRAAVMDAVSTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELTMV 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLIAVGYDPVYGAR 813


>gi|431931585|ref|YP_007244631.1| ATP-dependent chaperone ClpB [Thioflavicoccus mobilis 8321]
 gi|431829888|gb|AGA91001.1| ATP-dependent chaperone ClpB [Thioflavicoccus mobilis 8321]
          Length = 864

 Score =  816 bits (2109), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/655 (59%), Positives = 518/655 (79%), Gaps = 10/655 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L SK++L LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKSKRLLALDMAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLNDVARQEGNVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHH VEITDPAIVAA+ LS+R
Sbjct: 320 RKYVEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHAVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAAA++++EIDS PE MD+L+RRLIQLKIE EA+++E DE+SKK
Sbjct: 380 YITDRQLPDKAIDLIDEAAAQLRVEIDSMPEEMDRLDRRLIQLKIEQEAVRKETDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++++I +LE ++++L++IWK EK  ++ +  IKEE+++ R +   A R  D   +S
Sbjct: 440 RLADLEEQIERLEREFSDLDEIWKAEKAAVQGTAHIKEELDRARFEYETARRAGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L    Q +        +  LL+ KV +EEIAEIVS+ TGIPVS++++
Sbjct: 500 ELQYGRIPELERQLANAEQAE------QGETRLLRNKVTAEEIAEIVSKWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RVVGQDEA+ AVS+AIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEAALEHRVVGQDEALRAVSDAIRRSRAGLADPARPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RR+PYSL
Sbjct: 614 LCKALAEFLFDTEEAMVRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKI-KEMEKGD 552
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRN ++VMTSNLGS+ I ++  + +
Sbjct: 674 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNAVVVMTSNLGSEVIQRQAGEAN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K +VM  V+  FRPEFINR+D+I+VF  L  + I +IA IQ+  L+ +L    M L
Sbjct: 734 YAAMKESVMEIVRQAFRPEFINRLDEIVVFHPLQPEQIRAIARIQIRYLQTRLADREMRL 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 667
           +IS AAL  +   GFD +YGAR +   K+++   L+    ++  A     GDLI 
Sbjct: 794 EISDAALDHLGEAGFDPVYGARPL---KRAIRTQLENPLAQAILAGRFSPGDLIE 845


>gi|398857371|ref|ZP_10613071.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM79]
 gi|398240962|gb|EJN26625.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM79]
          Length = 854

 Score =  816 bits (2109), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/621 (61%), Positives = 511/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI + E +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEITRHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  ++  LL++KV  EEIAE+VS+ TGIPV+K+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKL+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GEREKLMKMESLLHQRVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  + L+
Sbjct: 733 EAQRAAVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+ K+  +G+D +YGAR
Sbjct: 793 LSPEAMDKLIAVGYDPVYGAR 813


>gi|398913136|ref|ZP_10656309.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM49]
 gi|398181097|gb|EJM68668.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM49]
          Length = 854

 Score =  816 bits (2109), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/621 (62%), Positives = 510/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KALLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI + E +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIARHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKL+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GEREKLMKMESLLHQRVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  + L+
Sbjct: 733 EAQRAAVMDAISSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+ K+  +G+D +YGAR
Sbjct: 793 LSPEAMDKLIAVGYDPVYGAR 813


>gi|352105799|ref|ZP_08960963.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas sp.
           HAL1]
 gi|350598222|gb|EHA14345.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas sp.
           HAL1]
          Length = 859

 Score =  816 bits (2108), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/623 (61%), Positives = 512/623 (82%), Gaps = 6/623 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  LLAG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKDKRVLSLDMGSLLAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLKELSQEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP  E+T++ILRGL+++YEVHHGV+ITD AI+AA++LS R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSEEDTVAILRGLKERYEVHHGVDITDSAIIAAAKLSTR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA++I++E+DSKPE MD+L+RRLIQLK+E EA+K+E DE+SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAASRIRMELDSKPESMDRLDRRLIQLKMEREALKKETDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +  +I++LE +YA+L++IWK EK  I+ + Q K ++E+ RL + +A R+ D   +S
Sbjct: 440 RLEALSAQIHELEREYADLDEIWKAEKASIQGAAQFKADLEQARLDLEQARRQGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG++  LE+ + E  + +     + +   LL++ V  EEIAE+VSR TGIPVSK+++
Sbjct: 500 EIQYGKIPALEKKIAESGEGEA----DTSSHQLLRSNVTEEEIAEVVSRWTGIPVSKMLE 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQDEA+ AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLRMEEALHERVIGQDEAVEAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKSLANFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           +LLDE+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSN+GSD I+ M  +  
Sbjct: 676 LLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNMGSDIIQRMGGDDS 735

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E++K  VM  V  +FRPE INRID+++VF  L ++ I +IA IQL  LK +L + ++ 
Sbjct: 736 DYEVMKNLVMEVVGNHFRPELINRIDEVVVFHALGQEQIQAIAGIQLERLKLRLAEHDLK 795

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L++S  A+ +++ +GFD +YGAR
Sbjct: 796 LEVSPEAMAQLAVVGFDPVYGAR 818


>gi|408483875|ref|ZP_11190094.1| chaperone [Pseudomonas sp. R81]
          Length = 854

 Score =  816 bits (2108), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/621 (62%), Positives = 510/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDDAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIVRLEREYSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+LL +RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLLKMESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+ +L +  +DL 
Sbjct: 733 EGQRAAVMDALTSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRGRLAERELDLV 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSSEALDKLIAVGYDPVYGAR 813


>gi|395499146|ref|ZP_10430725.1| ATP-dependent chaperone protein ClpB [Pseudomonas sp. PAMC 25886]
          Length = 854

 Score =  816 bits (2107), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/621 (62%), Positives = 511/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE +KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEPAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIVRLEREYSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+LL +RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLLKMESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSVQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  + L+
Sbjct: 733 EAQRAAVMDALTSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELSLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ AL K+  +G+D +YGAR
Sbjct: 793 LSREALDKLIAVGYDPVYGAR 813


>gi|398840843|ref|ZP_10598074.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM102]
 gi|398109674|gb|EJL99594.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM102]
          Length = 854

 Score =  816 bits (2107), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/621 (61%), Positives = 511/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI + E +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLERLQEEIVRHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  ++  LL++KV  EEIAE+VS+ TGIPV+K+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKL+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GEREKLMKMESLLHQRVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  + L+
Sbjct: 733 EAQRAAVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+ K+  +G+D +YGAR
Sbjct: 793 LSPEAMDKLIAVGYDPVYGAR 813


>gi|289651391|ref|ZP_06482734.1| clpB protein [Pseudomonas syringae pv. aesculi str. 2250]
          Length = 854

 Score =  816 bits (2107), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/621 (62%), Positives = 506/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++E+ +LE +YA+LE+IW  EK  +  S  I+++IE+ R ++  A R+ D   ++
Sbjct: 440 RLEKLQEEVVRLEKEYADLEEIWTSEKAEVTGSAHIQQKIEQSRQELEAARRRGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL  RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GEREKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYSL
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEKGGYLTEAVRRKPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEF+NRID++++F  L R  I  I +IQL  L+ +L +  + L 
Sbjct: 733 EAQRAAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELALT 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLIAVGYDPVYGAR 813


>gi|359781834|ref|ZP_09285057.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
           psychrotolerans L19]
 gi|359370204|gb|EHK70772.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
           psychrotolerans L19]
          Length = 854

 Score =  815 bits (2106), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/621 (61%), Positives = 510/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNELAKQEGRIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLK+E +A+K+E DE+++K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEALDRLDRRLIQLKVERQALKKEEDEAARK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + ++I +LE +YA+LE++WK EK  ++DS Q+++ IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLDEDIARLEQEYADLEEVWKAEKAEVQDSAQLQQRIEQARTELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q   + P N     LL+ KV  +EIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGTIPDLERSLQMVDQH--EKPAN----QLLRNKVTEDEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQDEA++AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEEALHNRVIGQDEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+ E++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKSLAEFLFDTEDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD++GRT++FRN +IVMTSNLGS +I+E+  GD 
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDSQGRTVDFRNAVIVMTSNLGSAQIQEL-VGDP 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           +  + AVM+ V  +FRPEFINRID+++VF  L R+ I  IA IQL  L+ +L + ++ L+
Sbjct: 733 DAQRAAVMDAVASHFRPEFINRIDEVVVFEPLGREQIAGIAEIQLQHLRQRLAERDLQLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLVAVGYDPVYGAR 813


>gi|374705469|ref|ZP_09712339.1| ATP-dependent chaperone ClpB [Pseudomonas sp. S9]
          Length = 854

 Score =  815 bits (2106), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/621 (61%), Positives = 508/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHRVAITDSAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E EA+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEREALKKEDDEATLK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +K +I +LE +YA+LE IWK EK  ++ S QI+++IE+ R ++  A RKSD + ++
Sbjct: 440 RLEKLKDDIARLEREYADLEDIWKSEKAEVQGSAQIQQKIEQARQELETARRKSDLEAMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL+Y  +  LER L+   Q      +   +  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 KLQYSVIPDLERSLQMVDQ------HGKTENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+LL +RV+GQ+E + AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLKMEDLLHQRVIGQNEGVVAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT++VMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVVVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E    AVM+ V  +FRPEFINRID+++VF  L R+ I  IA IQL  L  +L +  + L+
Sbjct: 733 EAQHAAVMDAVTTHFRPEFINRIDEVVVFEPLAREKIGGIAKIQLGRLHQRLAERELSLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+ K+  +G+D +YGAR
Sbjct: 793 LSDEAMDKLIAVGYDPVYGAR 813


>gi|410631289|ref|ZP_11341966.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
           arctica BSs20135]
 gi|410149112|dbj|GAC18833.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
           arctica BSs20135]
          Length = 856

 Score =  815 bits (2106), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/662 (59%), Positives = 522/662 (78%), Gaps = 15/662 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP  L +K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KAVLNELSKEEGRVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++++DSKPE MDKLERR+IQLK+E +A+ +E DE+S K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRLQMDSKPEDMDKLERRIIQLKLEEQALAKEKDEASHK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I+ E  + E K++  EKIW  EK  ++ +Q I+ E+E+ +L +  A R SD   +S
Sbjct: 440 RLEIIELEREQAEHKFSEFEKIWVAEKQAMQGTQTIRSELEQAKLDLEIARRASDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE  L+  ++ + Q      + TLLK KV   EIA+++SR TGIPVSK+++
Sbjct: 500 ELQYGRIPELEAKLELATESETQ------ETTLLKNKVTESEIADVLSRWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+ KLL++E  L KRVVGQ EA++AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKAKLLSMEKALHKRVVGQSEAVTAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+ E+++IRIDMSEF+EKHS++R++GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLAGFLFDTEDAMIRIDMSEFMEKHSVARMVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E+  + +
Sbjct: 674 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEVSGESN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  VM  V  +FRPEF+NR+DDI+VF  L ++ I +IA IQL  LK +L      L
Sbjct: 734 YQQMKSLVMTAVNDHFRPEFLNRVDDIVVFHPLGKEQITAIAKIQLRSLKERLADKGYKL 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
           ++S AAL+KI++ GFD +YGAR +   K+++   +     ++P A  I  GDL   G   
Sbjct: 794 ELSPAALEKIADAGFDPVYGARPL---KRAIQTEI-----ENPLAQKILSGDLAKDGTIK 845

Query: 673 LD 674
           +D
Sbjct: 846 ID 847


>gi|398901541|ref|ZP_10650394.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM50]
 gi|398179622|gb|EJM67226.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM50]
          Length = 854

 Score =  815 bits (2105), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/621 (61%), Positives = 511/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI + E +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIVRHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  ++  LL++KV  EEIAE+VS+ TGIPV+K+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKL+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GEREKLMKMESLLHQRVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  + L+
Sbjct: 733 EAQRAAVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+ K+  +G+D +YGAR
Sbjct: 793 LSPEAMDKLIAVGYDPVYGAR 813


>gi|398896328|ref|ZP_10647457.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM55]
 gi|398178588|gb|EJM66233.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM55]
          Length = 854

 Score =  815 bits (2105), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/621 (61%), Positives = 510/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KALLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI + E +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQDEIARHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  ++  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKL+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GEREKLMKMESLLHQRVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           IL+DE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILMDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  + L+
Sbjct: 733 EAQRAAVMDAISSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+ K+  +G+D +YGAR
Sbjct: 793 LSPEAMDKLIAVGYDPVYGAR 813


>gi|398873431|ref|ZP_10628689.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM74]
 gi|398199644|gb|EJM86580.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM74]
          Length = 854

 Score =  815 bits (2105), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/621 (61%), Positives = 510/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KALLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI + E +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIARHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKAENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKL+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GEREKLMKMESLLHQRVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           IL+DE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILMDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  + L+
Sbjct: 733 EAQRAAVMDAISSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+ K+  +G+D +YGAR
Sbjct: 793 LSPEAMDKLIAVGYDPVYGAR 813


>gi|422406178|ref|ZP_16483211.1| clpB protein [Pseudomonas syringae pv. glycinea str. race 4]
 gi|330881337|gb|EGH15486.1| clpB protein [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 855

 Score =  815 bits (2105), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/622 (62%), Positives = 507/622 (81%), Gaps = 8/622 (1%)

Query: 14  SNPVLIG-EPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDR 72
           +NPVLIG EPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+R
Sbjct: 200 NNPVLIGGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEER 259

Query: 73  LKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNE 132
           LK +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNE
Sbjct: 260 LKSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNE 319

Query: 133 YRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSY 192
           YRQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+
Sbjct: 320 YRQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSH 379

Query: 193 RYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSK 252
           RYI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ 
Sbjct: 380 RYITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAI 439

Query: 253 KRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTV 312
           KRL  +++E+ +LE +YA+LE+IW  EK  +  S QI+++IE+ R ++  A R+ D   +
Sbjct: 440 KRLEKLQEEVVRLEKEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRM 499

Query: 313 SKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIV 372
           ++L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK++
Sbjct: 500 AELQYGIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKML 553

Query: 373 QVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKT 432
           + EREKLL +E LL  RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKT
Sbjct: 554 EGEREKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKT 613

Query: 433 ELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYS 492
           ELCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS
Sbjct: 614 ELCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYS 673

Query: 493 LILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGD 552
           LILLDE+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD
Sbjct: 674 LILLDEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGD 732

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
           +E  + AVM+ V  +FRPEF+NRID++++F  L R  I  I +IQL  L+ +L +  + L
Sbjct: 733 REAQRAAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELAL 792

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +S  AL K+  +G+D +YGAR
Sbjct: 793 TLSPEALDKLIAVGYDPVYGAR 814


>gi|398865238|ref|ZP_10620760.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM78]
 gi|398243762|gb|EJN29341.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM78]
          Length = 854

 Score =  815 bits (2105), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/621 (61%), Positives = 510/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KALLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIARLEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELESARRKGDLSRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKL+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GEREKLMKMESLLHQRVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           IL+DE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  + L+
Sbjct: 733 EGQRAAVMDAISSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+ K+  +G+D +YGAR
Sbjct: 793 LSPEAMDKLIAVGYDPVYGAR 813


>gi|392419721|ref|YP_006456325.1| ClpB protein [Pseudomonas stutzeri CCUG 29243]
 gi|390981909|gb|AFM31902.1| ClpB protein [Pseudomonas stutzeri CCUG 29243]
          Length = 854

 Score =  815 bits (2105), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/621 (61%), Positives = 511/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLALDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I KLE +YA+LE+IWK EK  ++ S QI+++IE+ + ++  A RK D   ++
Sbjct: 440 RLAKLEDDIAKLEREYADLEEIWKSEKAEVQGSAQIQQKIEQAKAELEAARRKGDLARMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLEMVDQ------HGKKENQLLRNKVTDEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E++L  RV+GQ EA+ AVSNA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEDMLHTRVIGQHEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L+DE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GD 
Sbjct: 674 VLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQEL-VGDP 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           +  + AVM+ V  +FRPEFINRID+++VF  L R+ I  IA+IQL  L+ +L +  + L+
Sbjct: 733 DAQRAAVMDAVAHHFRPEFINRIDEVVVFDPLGREQIAGIADIQLGRLRKRLAERELSLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ A+ K+  IG+D +YGAR
Sbjct: 793 LSQEAMDKLIAIGYDPVYGAR 813


>gi|258545487|ref|ZP_05705721.1| chaperone protein ClpB [Cardiobacterium hominis ATCC 15826]
 gi|258519187|gb|EEV88046.1| chaperone protein ClpB [Cardiobacterium hominis ATCC 15826]
          Length = 856

 Score =  815 bits (2105), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/653 (59%), Positives = 533/653 (81%), Gaps = 13/653 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL  K++L LD+A LLAGTKYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKGKRLLSLDLAALLAGTKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I      II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 258 KAVLTDIEKANGQIILFIDEIHTMVGAGKTEGSMDAGNMLKPALARGELHCIGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQY+EKDAA ERRFQK++VEEP +E+TI+ILRGLQ++YEVHHG++ITDPA+VAA+ LS R
Sbjct: 318 RQYMEKDAALERRFQKVMVEEPTVEDTIAILRGLQERYEVHHGIDITDPALVAAAVLSNR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI++R +PDKAIDLIDEAAA+I++E+DSKPE MD+++RRLIQLK+E  A+++E+D++SKK
Sbjct: 378 YITNRQLPDKAIDLIDEAAAQIRMELDSKPETMDRIDRRLIQLKMERLALEKEHDDASKK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI+KLE +YA+LE++W+ EK  I+ S  IKEEI+++R+++  A R+ D+  +S
Sbjct: 438 RLADLQDEIDKLEKEYADLEEVWQAEKATIQGSAGIKEEIDRLRVELEAAKRRGDYAAMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG++  LE+ L   S+     P +    TL++++V  EEIA+IVSR TGIPV+K+++
Sbjct: 498 EIQYGKIPALEKQLAH-SETAAAKPQH----TLVRSEVTEEEIAQIVSRWTGIPVAKMLE 552

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L  RVVGQ+ A+ AV+NAIRR+R+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 553 SEKEKLLALESALGARVVGQETAVEAVANAIRRNRAGLSDPNRPIGSFLFLGPTGVGKTE 612

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LC+TL+A +F+++E+++RIDMSEF+EKHS++RLIGAPPGY+GY++GGYLTE VRR+PYS+
Sbjct: 613 LCRTLAAFLFDSDEAMVRIDMSEFMEKHSVARLIGAPPGYVGYDQGGYLTEAVRRRPYSV 672

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L DEIEKA++DVFN+LLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGS  I+EM   D 
Sbjct: 673 VLFDEIEKAHADVFNVLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSHLIQEMNYDDY 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +KLAVM  V  +FRPEFINRID+ +VF  L ++++  IA IQL  L+ +L +  + L+
Sbjct: 733 EAMKLAVMEIVSAHFRPEFINRIDETVVFHALGKEHMQGIATIQLARLRKRLAERELGLE 792

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
           IS AAL ++  +G+D ++GAR +   K+++     + H ++P A  I  GD +
Sbjct: 793 ISPAALAQLVEVGYDPVFGARPL---KRAI-----QTHLENPLAQRILAGDFL 837


>gi|15836983|ref|NP_297671.1| ATP-dependent Clp protease subunit [Xylella fastidiosa 9a5c]
 gi|54035911|sp|Q9PGC1.1|CLPB_XYLFA RecName: Full=Chaperone protein ClpB
 gi|9105213|gb|AAF83191.1|AE003889_8 ATP-dependent Clp protease subunit [Xylella fastidiosa 9a5c]
          Length = 861

 Score =  815 bits (2105), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/672 (58%), Positives = 530/672 (78%), Gaps = 16/672 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L SK++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLRSKRLLSLDLGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ N+  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKNEGRVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL++KY +HHGVEITDPAIVAA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKEKYALHHGVEITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+SK+
Sbjct: 380 YITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASKQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++++I  L+ ++++LE++W+ EK  ++ + +IKE IE+ +L +  A R+ D+  +S
Sbjct: 440 RLADLERDIEVLDREFSDLEEVWRSEKAALQGATKIKESIEQAKLDLEAAQRRQDYAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG L  LE+ L   SQ +       + FTL++ KV +EEIAE+VSR TGIPVSK+++
Sbjct: 500 EIQYGVLPALEKQLVAASQAE------QHDFTLVQEKVTAEEIAEVVSRWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEADLGRRVVGQEEAIKVVSDAVRRSRTGLSDPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE+VRR+PYSL
Sbjct: 614 LCKALAEFLFDSQDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTELVRRRPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+   D 
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDS 733

Query: 554 EII----KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
             +    K AVM  V+ +FRPEFINR+DDI+VF  L++  I  IA IQL  L+ +L +  
Sbjct: 734 PEVYTQMKAAVMEVVQAHFRPEFINRLDDIVVFHPLDKAQIKQIARIQLQGLEKRLAESE 793

Query: 610 MDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKG 669
           + L +   AL+ + N+GFD +YGAR +   K+++   L+    +   A     GD +  G
Sbjct: 794 LKLDLDDRALELLGNVGFDPVYGARPL---KRAIQSQLENPLAQQILAEAFVSGDTVQVG 850

Query: 670 PQSLDTLRMVYS 681
              +D  ++V++
Sbjct: 851 ---VDGGKLVFA 859


>gi|395795264|ref|ZP_10474573.1| ATP-dependent chaperone protein ClpB [Pseudomonas sp. Ag1]
 gi|421142087|ref|ZP_15602063.1| ClpB protein [Pseudomonas fluorescens BBc6R8]
 gi|395340627|gb|EJF72459.1| ATP-dependent chaperone protein ClpB [Pseudomonas sp. Ag1]
 gi|404506481|gb|EKA20475.1| ClpB protein [Pseudomonas fluorescens BBc6R8]
          Length = 854

 Score =  815 bits (2104), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/621 (62%), Positives = 510/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE +KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEPAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIVRLEREYSDLEEIWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+LL +RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLLKMESLLHQRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSVQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  + L 
Sbjct: 733 EAQRAAVMDALTSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELSLV 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ AL K+  +G+D +YGAR
Sbjct: 793 LSREALDKLIAVGYDPVYGAR 813


>gi|398992528|ref|ZP_10695493.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM21]
 gi|398136829|gb|EJM25907.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM21]
          Length = 854

 Score =  815 bits (2104), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/621 (61%), Positives = 510/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIVRLEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  ++  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KL+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLMKMESLLHQRVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  + L 
Sbjct: 733 EAQRAAVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLD 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+ K+  +G+D +YGAR
Sbjct: 793 LSPEAMDKLIAVGYDPVYGAR 813


>gi|452746805|ref|ZP_21946615.1| ClpB protein [Pseudomonas stutzeri NF13]
 gi|452009282|gb|EME01505.1| ClpB protein [Pseudomonas stutzeri NF13]
          Length = 854

 Score =  815 bits (2104), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/621 (61%), Positives = 511/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I KLE +YA+LE+IWK EK  ++ S QI+++IE+ + ++  A RK D   ++
Sbjct: 440 RLAKLEDDIAKLEREYADLEEIWKSEKAEVQGSAQIQQKIEQAKAELEAARRKGDLARMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLEMVDQ------HGKKENQLLRNKVTDEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E++L  RV+GQ EA+ AVSNA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEDMLHTRVIGQHEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L+DE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GD 
Sbjct: 674 VLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQEL-VGDP 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           +  + AVM+ V  +FRPEFINRID+++VF  L R+ I  IA+IQL  L+ +L +  + L+
Sbjct: 733 DAQRAAVMDAVAHHFRPEFINRIDEVVVFDPLGREQIAGIADIQLGRLRKRLAERELSLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ A+ K+  +G+D +YGAR
Sbjct: 793 LSQEAMDKLIAVGYDPVYGAR 813


>gi|399001519|ref|ZP_10704232.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM18]
 gi|398127409|gb|EJM16819.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM18]
          Length = 854

 Score =  815 bits (2104), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/621 (61%), Positives = 510/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KALLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI + E +Y++LE+IW  EK  +  S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIARHEREYSDLEEIWNSEKAEVHGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  ++  LL++KV  EEIAE+VS+ TGIPV+K+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKL+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GEREKLMKMESLLHQRVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-IGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  + L+
Sbjct: 733 EAQRAAVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+ K+  +G+D +YGAR
Sbjct: 793 LSPEAMDKLIAVGYDPVYGAR 813


>gi|311107398|ref|YP_003980251.1| chaperone protein ClpB [Achromobacter xylosoxidans A8]
 gi|310762087|gb|ADP17536.1| chaperone protein ClpB 1 [Achromobacter xylosoxidans A8]
          Length = 868

 Score =  815 bits (2104), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 395/625 (63%), Positives = 512/625 (81%), Gaps = 4/625 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP +L  K++L LD+A LLAG K+RGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S +    I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLKELSLDDGSNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVDEPDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEA A+I++EIDSKPE+MDKL+RR+IQLKIE EA+K+E D++SK+
Sbjct: 379 YITDRFLPDKAIDLIDEAGARIRMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDDASKR 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I+ E+ KL+ +Y + E+IWK EK  ++ +Q IKEEI+ VR ++ +  RK  +  ++
Sbjct: 439 RLGVIEDELEKLQREYNDYEEIWKAEKAAVQGTQAIKEEIDSVRAEMAELQRKGQFDKLA 498

Query: 314 KLKYGELNKLERILK----EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVS 369
           +L+YG+L  LE  LK      ++          +  LL+T+VG+EEIAE+VSR TGIPVS
Sbjct: 499 ELQYGKLPDLEARLKAAEVGAAEAAEDAEGGEGRPRLLRTRVGAEEIAEVVSRATGIPVS 558

Query: 370 KIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGV 429
           K++Q EREKLL++E  L KRVVGQDEA+  VS+AIRRSR+GL+D  RPYGSF+FLGPTGV
Sbjct: 559 KMMQGEREKLLHMEEYLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGV 618

Query: 430 GKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRK 489
           GKTEL + L+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRK
Sbjct: 619 GKTELTRALAEFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRK 678

Query: 490 PYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME 549
           PYS+ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I+ + 
Sbjct: 679 PYSVILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHHIQSLA 738

Query: 550 KGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
               +++K  V +E+K   RPEF+NRID+++VF  L  ++I SIA IQL  L  +L K  
Sbjct: 739 GKPYDVVKEVVWDELKQTLRPEFLNRIDEVVVFHGLEAQHIESIARIQLRRLGERLEKQE 798

Query: 610 MDLKISKAALKKISNIGFDLIYGAR 634
           M L++S+ AL +++  GFD ++GAR
Sbjct: 799 MRLEVSEPALAELARSGFDPVFGAR 823


>gi|378822292|ref|ZP_09845094.1| ATP-dependent chaperone protein ClpB [Sutterella parvirubra YIT
           11816]
 gi|378598886|gb|EHY31972.1| ATP-dependent chaperone protein ClpB [Sutterella parvirubra YIT
           11816]
          Length = 867

 Score =  815 bits (2104), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/620 (61%), Positives = 508/620 (81%), Gaps = 1/620 (0%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTA+VEGLAQRI+N EVP++L  KK+L LD+A L+AG KYRGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAVVEGLAQRIVNDEVPDTLKGKKVLSLDMAGLIAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
           K+L+E+   +  II+FIDELHT++G GK EGS+DAGNMLKP L+RGELH IGATTL+EYR
Sbjct: 261 KLLEEVVAQEGRIILFIDELHTVVGAGKTEGSMDAGNMLKPALARGELHVIGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           +Y+EKDAA ERRFQK+L++EP +E+TI+ILRGLQ+KYE HHGVEITDPAIVAA+ELS RY
Sbjct: 321 KYVEKDAALERRFQKVLIDEPTVEDTIAILRGLQEKYEAHHGVEITDPAIVAAAELSNRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DRF+PDKAIDLIDEAAA++K+EIDSKPE +DKL+RRLIQLKIE EA+++E D++SKKR
Sbjct: 381 ITDRFLPDKAIDLIDEAAARVKMEIDSKPEALDKLDRRLIQLKIEREAMRKETDDASKKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L  I++EI KL  +YA+LE+IWK EK+    ++ +++EIE VR ++ +  R++ ++ +++
Sbjct: 441 LEAIEEEIEKLSREYADLEEIWKKEKSEALGAKSVRDEIENVRREMEECRRQAKYERLAE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+Y  L KLE  L+    ++ Q   +     LL+T VG+EEIAE VSR TGIPV+K+++ 
Sbjct: 501 LQYAVLPKLEEKLRHAEDEEKQEKKSGGP-KLLRTSVGAEEIAEAVSRATGIPVAKMMEG 559

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           ER KLL++   L  RVVGQDEA+  V+  I RSR+GLSD  RPYGSF+FLGPTGVGKTEL
Sbjct: 560 ERAKLLHMGEALESRVVGQDEAVKRVTETIMRSRAGLSDPNRPYGSFLFLGPTGVGKTEL 619

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
            K L+  +F+++++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+I
Sbjct: 620 TKALANFLFDSDDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSVI 679

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDE+EKA+ DVFN+LLQ+LDDGR+TD +GRT++F+NT+IVMTSNLG+ +I++M     E
Sbjct: 680 LLDEVEKAHPDVFNVLLQVLDDGRMTDGQGRTVDFKNTVIVMTSNLGAAEIQDMIGESHE 739

Query: 555 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 614
            +K AVM EV+ +FRPEF+NRID+I+VF  L + +I  IA +QL++L  ++   ++ L++
Sbjct: 740 RVKAAVMAEVREHFRPEFVNRIDEIVVFNPLGKDHIKRIAEMQLSLLAGRMAAQDIGLRV 799

Query: 615 SKAALKKISNIGFDLIYGAR 634
             AAL +I+  GFD  +GAR
Sbjct: 800 EPAALDEIAEAGFDPHFGAR 819


>gi|71276549|ref|ZP_00652823.1| AAA ATPase, central region:Clp, N terminal [Xylella fastidiosa
           Dixon]
 gi|170730931|ref|YP_001776364.1| ATP-dependent Clp protease subunit [Xylella fastidiosa M12]
 gi|71162620|gb|EAO12348.1| AAA ATPase, central region:Clp, N terminal [Xylella fastidiosa
           Dixon]
 gi|71729142|gb|EAO31265.1| AAA ATPase, central region:Clp, N terminal [Xylella fastidiosa
           Ann-1]
 gi|167965724|gb|ACA12734.1| ATP-dependent Clp protease subunit [Xylella fastidiosa M12]
          Length = 861

 Score =  814 bits (2103), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/672 (58%), Positives = 530/672 (78%), Gaps = 16/672 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L SK++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLRSKRLLSLDLGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ N+  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKNEGRVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL++KY +HHGVEITDPAIVAA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKEKYALHHGVEITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+SK+
Sbjct: 380 YITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASKQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++++I  L+ ++++LE++W+ EK  ++ + +IKE IE+ +L +  A R+ D+  +S
Sbjct: 440 RLADLERDIEVLDREFSDLEEVWRSEKAALQGATKIKESIEQAKLDLEAAQRRQDYAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG L  LE+ L   SQ +       + FTL++ KV +EEIAE+VSR TGIPVSK+++
Sbjct: 500 EIQYGVLPALEKQLVAASQAE------QHDFTLVQEKVTAEEIAEVVSRWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEADLGRRVVGQEEAIKVVSDAVRRSRTGLSDPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE+VRR+PYSL
Sbjct: 614 LCKALAEFLFDSQDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTELVRRRPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+   D 
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDS 733

Query: 554 EII----KLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
             +    K AVM  V+ +FRPEFINR+DDI+VF  L++  I  IA IQL  L+ +L +  
Sbjct: 734 PEVYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKQIARIQLRGLEKRLAESE 793

Query: 610 MDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKG 669
           + L +   AL+ + N+GFD +YGAR +   K+++   L+    +   A     GD +  G
Sbjct: 794 LKLDLDDRALELLGNVGFDPVYGARPL---KRAIQSQLENPLAQQILAGAFVSGDTVQVG 850

Query: 670 PQSLDTLRMVYS 681
              +D  ++V++
Sbjct: 851 ---VDGGKLVFA 859


>gi|359796795|ref|ZP_09299388.1| chaperone protein ClpB [Achromobacter arsenitoxydans SY8]
 gi|359365241|gb|EHK66945.1| chaperone protein ClpB [Achromobacter arsenitoxydans SY8]
          Length = 868

 Score =  814 bits (2103), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 391/625 (62%), Positives = 514/625 (82%), Gaps = 4/625 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP +L  K++L LD+A LLAG K+RGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+  +    I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLKELGQDDGRNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVDEPDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEA A+I++EIDSKPE+MDKL+RR+IQLKIE EA+K+E D++SK+
Sbjct: 379 YITDRFLPDKAIDLIDEAGARIRMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDDASKR 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I++E+ KL+ +Y + E+IWK EK  ++ +Q IKEEI+ VR ++ +  RK  +  ++
Sbjct: 439 RLAVIEEELEKLQREYNDYEEIWKAEKAAVQGTQAIKEEIDSVRAEMAELQRKGQFDKLA 498

Query: 314 KLKYGELNKLERILK----EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVS 369
           +L+YG+L  LE  LK      ++       + ++  LL+T+VG+EEIAE+VSR TGIPVS
Sbjct: 499 ELQYGKLPDLEARLKAAEVGAAEAAENAEGDESRPRLLRTRVGAEEIAEVVSRATGIPVS 558

Query: 370 KIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGV 429
           K++Q EREKLLN+E  L +RVVGQDEA+  VS+AIRRSR+GL+D  RPYGSF+FLGPTGV
Sbjct: 559 KMMQGEREKLLNMEEFLHRRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGV 618

Query: 430 GKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRK 489
           GKTEL + L+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRK
Sbjct: 619 GKTELTRALAEFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRK 678

Query: 490 PYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME 549
           PYS++LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I+ + 
Sbjct: 679 PYSVVLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHHIQSLA 738

Query: 550 KGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
               +++K  V +E+K   RPEF+NRID+++VF  L  ++I SIA IQL  L  +L +  
Sbjct: 739 GQPYDVVKEVVWDELKQTLRPEFLNRIDEVVVFHGLEAQHIESIARIQLRRLGERLERQE 798

Query: 610 MDLKISKAALKKISNIGFDLIYGAR 634
           M L++++ AL +++  GFD ++GAR
Sbjct: 799 MRLEVTEPALAELARSGFDPVFGAR 823


>gi|386817480|ref|ZP_10104698.1| ATP-dependent chaperone ClpB [Thiothrix nivea DSM 5205]
 gi|386422056|gb|EIJ35891.1| ATP-dependent chaperone ClpB [Thiothrix nivea DSM 5205]
          Length = 870

 Score =  814 bits (2103), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/622 (62%), Positives = 517/622 (83%), Gaps = 5/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTA+VEGLAQRI+NGEVP  +  K++L LD+  LLAG+KYRG+FE+RL
Sbjct: 201 NNPVLIGEPGVGKTALVEGLAQRIVNGEVPEGVKGKRLLSLDLGALLAGSKYRGDFEERL 260

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+ ++ ++I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 261 KAVLTDIAKSEGNVILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 320

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGLQ+KYEVHHGV+ITDPA+VAA+ LS+R
Sbjct: 321 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLQEKYEVHHGVDITDPALVAAATLSHR 380

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE +DKLERRLIQLKIE EA+K+E DE+SKK
Sbjct: 381 YITDRQLPDKAIDLIDEAASRIRLEIDSKPEALDKLERRLIQLKIEREALKKESDEASKK 440

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI++LE+ Y++LE++WK EK  ++ +  IKE +++ RL+ + A R  + Q ++
Sbjct: 441 RLADLQAEIDRLELDYSDLEEVWKGEKAAMQGTTHIKEALDQARLEFDTAKRAGNLQRMA 500

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +  D  + N+  +  LLK KV  EEIA+IVSR TGIPVSK+++
Sbjct: 501 ELQYGKIPELEQQL---AAADAAV-NSQQETKLLKNKVTDEEIADIVSRWTGIPVSKMLE 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E++L KRV+GQ EA+ AVSNAIRR+R+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 557 SEKEKLLQMEDVLGKRVIGQREAVVAVSNAIRRARAGLSDPNRPSGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ +++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 617 LTKALAKFLFDTDDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFN+LLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGS  I+EM   + 
Sbjct: 677 ILLDEVEKAHADVFNVLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSHLIQEMTGEEN 736

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E +K AVM  V  +FRPEFINRID+ +VF  L++  I  IA+IQLN L+ +L   ++ +
Sbjct: 737 YERMKAAVMEVVGTHFRPEFINRIDETVVFHPLDQAEIRQIADIQLNNLRKRLAARDLGI 796

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +++AAL  I+  GFD +YGAR
Sbjct: 797 SVTEAALDHIAEAGFDPVYGAR 818


>gi|422318953|ref|ZP_16400043.1| chaperone ClpB [Achromobacter xylosoxidans C54]
 gi|317406406|gb|EFV86623.1| chaperone ClpB [Achromobacter xylosoxidans C54]
          Length = 868

 Score =  814 bits (2103), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/625 (62%), Positives = 512/625 (81%), Gaps = 4/625 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP +L  K++L LD+A LLAG K+RGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S +    I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLKELSQDDGSNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVDEPDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEA A+I++EIDSKPE+MDKL+RR+IQLKIE EA+K+E D++SK+
Sbjct: 379 YITDRFLPDKAIDLIDEAGARIRMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDDASKR 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I+ E+ KL+ +Y + E+IWK EK  ++ +Q IKEEI+ VR ++ +  RK  +  ++
Sbjct: 439 RLGVIEDELEKLQREYNDFEEIWKAEKAAVQGTQAIKEEIDSVRAEMAELQRKGQFDKLA 498

Query: 314 KLKYGELNKLERILK----EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVS 369
           +L+YG+L  LE  LK      ++   +      +  LL+T+VG+EEIAE+VSR TGIPVS
Sbjct: 499 ELQYGKLPDLEARLKAAEVGAAEAAEEAEGGEGRPRLLRTRVGAEEIAEVVSRATGIPVS 558

Query: 370 KIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGV 429
           K++Q EREKLL++E  L KRVVGQDEA+  VS+AIRRSR+GL+D  RPYGSF+FLGPTGV
Sbjct: 559 KMMQGEREKLLHMEEYLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGV 618

Query: 430 GKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRK 489
           GKTEL + L+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRK
Sbjct: 619 GKTELTRALAEFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRK 678

Query: 490 PYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME 549
           PYS++LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I+ + 
Sbjct: 679 PYSVVLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQTLA 738

Query: 550 KGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
               +++K  V  E+K   RPEF+NRID+++VF  L  ++I SIA IQL  L  +L K  
Sbjct: 739 GQPYDVVKEVVWGELKQTLRPEFLNRIDEVVVFHGLEAQHIESIARIQLRRLAERLEKQE 798

Query: 610 MDLKISKAALKKISNIGFDLIYGAR 634
           M L++++ AL +++  GFD ++GAR
Sbjct: 799 MRLEVTEPALAELARDGFDPVFGAR 823


>gi|423018803|ref|ZP_17009524.1| chaperone protein ClpB 1 [Achromobacter xylosoxidans AXX-A]
 gi|338778101|gb|EGP42583.1| chaperone protein ClpB 1 [Achromobacter xylosoxidans AXX-A]
          Length = 868

 Score =  814 bits (2103), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/625 (62%), Positives = 512/625 (81%), Gaps = 4/625 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP +L  K++L LD+A LLAG K+RGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S +    I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLKELSQDDGSNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVDEPDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEA A+I++EIDSKPE+MDKL+RR+IQLKIE EA+K+E D++SK+
Sbjct: 379 YITDRFLPDKAIDLIDEAGARIRMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDDASKR 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I+ E+ KL+ +Y + E+IWK EK  ++ +Q IKEEI+ VR ++ +  RK  +  ++
Sbjct: 439 RLGVIEDELEKLQREYNDFEEIWKAEKAAVQGTQAIKEEIDSVRAEMAELQRKGQFDKLA 498

Query: 314 KLKYGELNKLERILK----EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVS 369
           +L+YG+L  LE  LK      ++   +      +  LL+T+VG+EEIAE+VSR TGIPVS
Sbjct: 499 ELQYGKLPDLEARLKAAEVGAAEAAEEAEGGEGRPRLLRTRVGAEEIAEVVSRATGIPVS 558

Query: 370 KIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGV 429
           K++Q EREKLL++E  L KRVVGQDEA+  VS+AIRRSR+GL+D  RPYGSF+FLGPTGV
Sbjct: 559 KMMQGEREKLLHMEEYLHKRVVGQDEAVRLVSDAIRRSRAGLADPSRPYGSFLFLGPTGV 618

Query: 430 GKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRK 489
           GKTEL + L+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRK
Sbjct: 619 GKTELTRALAEFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRK 678

Query: 490 PYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME 549
           PYS++LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I+ + 
Sbjct: 679 PYSVVLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQHIQTLA 738

Query: 550 KGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
               +++K  V  E+K   RPEF+NRID+++VF  L  ++I SIA IQL  L  +L K  
Sbjct: 739 GQPYDVVKEVVWGELKQTLRPEFLNRIDEVVVFHGLEAQHIESIARIQLRRLAERLEKQE 798

Query: 610 MDLKISKAALKKISNIGFDLIYGAR 634
           M L++++ AL +++  GFD ++GAR
Sbjct: 799 MRLEVTEPALAELARDGFDPVFGAR 823


>gi|398948515|ref|ZP_10672836.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM33]
 gi|398160568|gb|EJM48835.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM33]
          Length = 854

 Score =  814 bits (2102), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/621 (61%), Positives = 510/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI + E +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIARHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKAENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KL+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLMKMESLLHQRVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           IL+DE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILMDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  + L+
Sbjct: 733 EAQRAAVMDAISSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+ K+  +G+D +YGAR
Sbjct: 793 LSPEAMDKLIAVGYDPVYGAR 813


>gi|422653309|ref|ZP_16716077.1| clpB protein [Pseudomonas syringae pv. actinidiae str. M302091]
 gi|330966360|gb|EGH66620.1| clpB protein [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 854

 Score =  814 bits (2102), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/621 (62%), Positives = 506/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI +LE +YA+LE+IW  EK  +  S QI+++IE+ R ++  A R+ D   ++
Sbjct: 440 RLEKLQEEIVRLEKEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL  RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GEREKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +F PEF+NRID++++F  L R  I  I +IQL  L+ +L +  + + 
Sbjct: 733 EAQRAAVMDAVSTHFHPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELTMV 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLIAVGYDPVYGAR 813


>gi|110833340|ref|YP_692199.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
           borkumensis SK2]
 gi|110646451|emb|CAL15927.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
           borkumensis SK2]
          Length = 865

 Score =  814 bits (2102), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/627 (60%), Positives = 511/627 (81%), Gaps = 9/627 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKDKQVLSLDMAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKQEGRIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGV+ITD AI+AA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEVHHGVDITDGAIIAAARLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEA ++I++EIDS PE MD+L+RRLIQLK+E EA+++E D++S+K
Sbjct: 380 YITDRQLPDKAIDLIDEAGSRIRMEIDSMPEEMDRLDRRLIQLKMEREALRKEDDDASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI++LE +YA+LE+IW+ EK  ++ + + K E+E+ R+++ +A R  D   +S
Sbjct: 440 RLEKLEDEIDELEKEYADLEEIWQAEKAALQGAAEYKAELEQARVELEQARRAGDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGE+ +LE+ +++   ++ Q         LL+ KV  EEIAE+V++ TGIPVSK+++
Sbjct: 500 ELQYGEIPELEKKVQDAQDREEQAQTETQ---LLRNKVTDEEIAEVVAKWTGIPVSKMLE 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +E+ L  RVVGQ+EA+ AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 557 GEKDKLLRMEDALHDRVVGQNEAVEAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE+VRRKPYS+
Sbjct: 617 LCKALANFLFDTEEAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTELVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT++VMTSNLGSD I+++   D 
Sbjct: 677 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQKLAGSDA 736

Query: 554 ------EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLK 607
                 E +K AVM  V  +FRPEF+NR+D+ +VF  L +  +  IA+IQL  L+ +L +
Sbjct: 737 ESASDYETMKSAVMEVVGNHFRPEFLNRVDETVVFHPLAKDQLKGIASIQLGFLRKRLAE 796

Query: 608 MNMDLKISKAALKKISNIGFDLIYGAR 634
             M L++S AAL ++ + GFD +YGAR
Sbjct: 797 REMSLELSDAALDQLVDAGFDPVYGAR 823


>gi|426411549|ref|YP_007031648.1| chaperone ClpB [Pseudomonas sp. UW4]
 gi|426269766|gb|AFY21843.1| chaperone ClpB [Pseudomonas sp. UW4]
          Length = 854

 Score =  814 bits (2102), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/621 (61%), Positives = 510/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI + E +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIARHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKAENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KL+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLMKMESLLHQRVIGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           IL+DE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILMDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  + L+
Sbjct: 733 EAQRAAVMDAISSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+ K+  +G+D +YGAR
Sbjct: 793 LSPEAMDKLIAVGYDPVYGAR 813


>gi|422649153|ref|ZP_16712263.1| clpB protein [Pseudomonas syringae pv. maculicola str. ES4326]
 gi|330962677|gb|EGH62937.1| clpB protein [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 854

 Score =  814 bits (2102), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/621 (62%), Positives = 506/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDDAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI +LE +YA+LE+IW  EK  +  S QI+++IE+ R ++  A R+ D   ++
Sbjct: 440 RLEKLQDEIVRLEKEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E LL KRV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLLRMETLLHKRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEF+NRID++++F  L R  I  I +IQL  L+ +L +  + L 
Sbjct: 733 EAQRAAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLTERELTLV 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLIAVGYDPVYGAR 813


>gi|407804423|ref|ZP_11151246.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
           sp. W11-5]
 gi|407021612|gb|EKE33377.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
           sp. W11-5]
          Length = 859

 Score =  814 bits (2102), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/657 (58%), Positives = 523/657 (79%), Gaps = 21/657 (3%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIG PGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGAPGVGKTAIVEGLAQRIVNGEVPEGLKDKRVLALDMAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKQEGRVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGVEITD AI+AA++LS R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVEITDGAIIAAAKLSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEA ++I++EIDS PE MD+L+R+LIQLK+E EA+++E DE+S+K
Sbjct: 380 YITDRQLPDKAIDLIDEAGSRIRMEIDSMPEEMDRLDRKLIQLKMEREALRKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++++I + E +YA+L +IW  EK  ++  Q++K ++EK R+++++A R  D   +S
Sbjct: 440 RLEKLEEDIARFEKEYADLREIWDAEKATLQGEQEVKADLEKARVEMDQARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGE+  LE+ L+E   ++ Q      +  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGEIPALEKKLEEAKNREQQ------ETQLLRNKVTDEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L KRVVGQDEA+ AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEDALHKRVVGQDEAVQAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+  ++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKSLAEFLFDTTDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT++VMTSNLGSD I+ +  G++
Sbjct: 674 LLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQRL-AGEE 732

Query: 554 --EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             + +K AVM  V  +FRPEFINR+D+++VF  L +  I  IA+IQL+ L+ +L + +M 
Sbjct: 733 HYDAMKAAVMEVVGQHFRPEFINRVDEVVVFHPLEKGQIRGIADIQLDALRKRLAERDMR 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKK--SPEANFIFLGDLI 666
           L ++  AL ++ + GFD +YGAR           L + I +K  +P A  I  GD +
Sbjct: 793 LVLTDTALDQLVDAGFDPVYGARP----------LKRAIQQKVENPLATAILRGDFL 839


>gi|451822903|ref|YP_007459177.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
           Kinetoplastibacterium desouzaii TCC079E]
 gi|451775703|gb|AGF46744.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
           Kinetoplastibacterium desouzaii TCC079E]
          Length = 865

 Score =  813 bits (2101), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/625 (62%), Positives = 509/625 (81%), Gaps = 7/625 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP++L  KK+L LD+A L+AG K+RGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNSEVPDNLKGKKVLSLDMASLVAGAKFRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S +  + IIFIDELHT++G GK EGS+DAGNMLKP L+RG+LHCIGATTL+EY
Sbjct: 259 KSVLKELSLDSGNNIIFIDELHTIMGAGKAEGSMDAGNMLKPALARGDLHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EPD+E TI+ILRGL+++YE+HHG++ITDPAIVAA+ELS R
Sbjct: 319 RKYIEKDAALERRFQKVLVDEPDVESTIAILRGLRERYEIHHGIQITDPAIVAAAELSNR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEA ++I++EIDSKPE+MDKL+RR+IQLKIE EA+KRE DESSKK
Sbjct: 379 YITDRFLPDKAIDLIDEAGSRIRMEIDSKPEVMDKLDRRIIQLKIEREAVKRETDESSKK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  I++E+ KL+ +Y + E IWK EK  ++ +Q IKEEI+ ++ K+ +  R   +  ++
Sbjct: 439 RLSFIEEELAKLQREYGDYEDIWKSEKAAVQGTQAIKEEIDNLKAKMAELQRTGQYDKLA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNAN----KFTLLKTKVGSEEIAEIVSRTTGIPVS 369
           +++Y  L  LE  LK     +  L NN N    KF LL+ +VG+EEIAE+VSR TGIPVS
Sbjct: 499 EIQYAVLPSLELRLK---ASEAGLENNHNSEERKFKLLRIQVGAEEIAEVVSRATGIPVS 555

Query: 370 KIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGV 429
           K+++ EREKLL++ + L  RVVGQ+EA+ AVS+AI RSR+GLSD+ RP GSF+FLGPTGV
Sbjct: 556 KMMKGEREKLLHLNDFLSSRVVGQNEAVQAVSDAILRSRAGLSDSARPSGSFLFLGPTGV 615

Query: 430 GKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRK 489
           GKTEL + L+  +F++ + IIR+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRK
Sbjct: 616 GKTELARALTEFMFDSSDHIIRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRK 675

Query: 490 PYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME 549
           PY +ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++I+MTSNLGS +I+ M 
Sbjct: 676 PYCVILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVIIMTSNLGSSEIQNMH 735

Query: 550 KGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
           +   E ++  V+ ++K   RPEF+NRIDDI+VF  L RK++ SI  IQL  LK ++    
Sbjct: 736 EKTYEDVREVVLEKLKQVLRPEFLNRIDDIVVFHNLERKHMNSIVRIQLERLKYRIENKG 795

Query: 610 MDLKISKAALKKISNIGFDLIYGAR 634
           M + +S  A+ ++SN+GFD  +GAR
Sbjct: 796 MYINLSDEAISELSNVGFDHQFGAR 820


>gi|339000201|ref|ZP_08638818.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas sp.
           TD01]
 gi|338762897|gb|EGP17912.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas sp.
           TD01]
          Length = 859

 Score =  813 bits (2101), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/623 (61%), Positives = 511/623 (82%), Gaps = 6/623 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  LLAG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKEKRVLSLDMGSLLAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLKELSQEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP  E+T++ILRGL+++YEVHHGV+ITD AI+AA++LS R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSEEDTVAILRGLKERYEVHHGVDITDSAIIAAAKLSTR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA++I++E+DSKPE MD+L+RRLIQLK+E EA+K+E DE++KK
Sbjct: 380 YISDRQLPDKAIDLIDEAASRIRMELDSKPEEMDRLDRRLIQLKMEREALKKETDEATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +  +I++LE +YA+L++IWK EK  I+ + Q K E+E+ R+ + +A R+ D   +S
Sbjct: 440 RLEALNNQIHELEREYADLDEIWKAEKASIQGAAQFKAELEQARIDLEQARRQGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG++  LE+ + E  + +    ++     LL++ V  EEIAE+VSR TGIPVSK+++
Sbjct: 500 EIQYGKIPALEKKISEAGEGEADTASH----QLLRSNVTEEEIAEVVSRWTGIPVSKMLE 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQ EA+ AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLRMEEALHERVIGQHEAVEAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKSLANFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           +LLDE+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSN+GSD I+ M  +  
Sbjct: 676 LLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNMGSDIIQRMGGDDN 735

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E++K AVM  V  +FRPE INRID+++VF  L ++ I +IA IQL  LK +L + ++ 
Sbjct: 736 DYEVMKNAVMEVVGNHFRPELINRIDEVVVFHALGQEQIQAIAGIQLERLKVRLAEHDLS 795

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L IS  A+ +++ +GFD +YGAR
Sbjct: 796 LAISDDAMAQLAVVGFDPVYGAR 818


>gi|398944095|ref|ZP_10671062.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM41(2012)]
 gi|398158504|gb|EJM46848.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM41(2012)]
          Length = 854

 Score =  813 bits (2100), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/621 (61%), Positives = 510/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGSLIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI + E +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIVRHEREYSDLEEIWNAEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLQMVDQ------HGKTENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KL+ +E+LL +RV+GQDEA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLMKMESLLHQRVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  + L+
Sbjct: 733 EAQRAAVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+ K+  +G+D +YGAR
Sbjct: 793 LSPEAMDKLIAVGYDPVYGAR 813


>gi|289661674|ref|ZP_06483255.1| ATP-dependent Clp protease [Xanthomonas campestris pv. vasculorum
           NCPPB 702]
 gi|289667092|ref|ZP_06488167.1| ATP-dependent Clp protease [Xanthomonas campestris pv. musacearum
           NCPPB 4381]
          Length = 861

 Score =  813 bits (2100), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/628 (61%), Positives = 511/628 (81%), Gaps = 16/628 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S N+  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLSDLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++
Sbjct: 380 YITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+KLE ++++L ++WK EK  ++ + +IKE+IE  +L++  A R+ D+  +S
Sbjct: 440 RLADLESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +++YG L +LE        K + L N    + F L++ +V +EEIAE+VSR TGIPV+K+
Sbjct: 500 EIQYGVLPQLE--------KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKM 551

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ ER+KLL +E+ L  RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVGK
Sbjct: 552 LEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGK 611

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++ E++IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRR+PY
Sbjct: 612 TELCKALADFLFDSTEAMIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRRPY 671

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           SLILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+  G
Sbjct: 672 SLILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQEL-SG 730

Query: 552 DKEI-----IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLL 606
           D        +K AVM  V+ +FRPEFINR+DDI+VF  LN+  I SIA IQL+ L+ +L 
Sbjct: 731 DGSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLNKAQIKSIARIQLHGLEKRLA 790

Query: 607 KMNMDLKISKAALKKISNIGFDLIYGAR 634
           +  + L +  AAL+ + N+GFD +YGAR
Sbjct: 791 ERGLKLDLDDAALELLGNVGFDPVYGAR 818


>gi|326796211|ref|YP_004314031.1| ATP-dependent chaperone ClpB [Marinomonas mediterranea MMB-1]
 gi|326546975|gb|ADZ92195.1| ATP-dependent chaperone ClpB [Marinomonas mediterranea MMB-1]
          Length = 861

 Score =  813 bits (2099), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/627 (61%), Positives = 515/627 (82%), Gaps = 15/627 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKQEGQIILFIDEIHTMVGAGKSEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LVEEP + ++I+ILRGL+++YEVHHGV+ITDPAI+AA++LS+R
Sbjct: 320 RQFIEKDAALERRFQKVLVEEPTVLDSIAILRGLKERYEVHHGVDITDPAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++E+DSKPE +D+LERRLIQLKIE EA+K+E D SSK+
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEMDSKPENLDRLERRLIQLKIEKEALKKETDRSSKQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI +L+ +Y++LE+IW  EK  ++ +Q++KEE+E+V+ ++ +A R+ +   +S
Sbjct: 440 RLKELESEIERLQKEYSDLEEIWNAEKAQVQGAQKLKEELEQVKQEMEEARRQGNLAKMS 499

Query: 314 KLKYGELNKLE-----RILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPV 368
           +L+YG +  LE       L E+ +++ Q         LLK +V  EEIA +VSR TGIPV
Sbjct: 500 ELQYGVIPMLEAEIEKATLAEEGEQETQ---------LLKNRVTEEEIATVVSRWTGIPV 550

Query: 369 SKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTG 428
            K+++ EREKLL +E++L + V+GQDEA++AVSNA+RRSRSGL+D KRP GSF+FLGPTG
Sbjct: 551 DKMLEGEREKLLRMEDVLHESVIGQDEAVNAVSNAVRRSRSGLADPKRPNGSFLFLGPTG 610

Query: 429 VGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRR 488
           VGKTELCK+L+  +F+ E++++R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR
Sbjct: 611 VGKTELCKSLAKFLFDTEQAMVRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRR 670

Query: 489 KPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM 548
           +PYS++LLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT++VMTSNLGSD I+E 
Sbjct: 671 RPYSVLLLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQEY 730

Query: 549 EKGDK-EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLK 607
           +  D+ E IK  V++ V   FRPEFINRID+ +VF  L ++ I  IA IQL+ L  +L +
Sbjct: 731 QTDDQYEEIKSKVLDVVGTQFRPEFINRIDETVVFHPLRKEQIAGIAKIQLSHLNERLEE 790

Query: 608 MNMDLKISKAALKKISNIGFDLIYGAR 634
           M M L +S +A+ +++ +G+D +YGAR
Sbjct: 791 MGMALTLSDSAMSQLAEVGYDPVYGAR 817


>gi|152979666|ref|YP_001345295.1| ATPase [Actinobacillus succinogenes 130Z]
 gi|150841389|gb|ABR75360.1| ATPase AAA-2 domain protein [Actinobacillus succinogenes 130Z]
          Length = 856

 Score =  813 bits (2099), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/661 (59%), Positives = 517/661 (78%), Gaps = 14/661 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLKELAQEEGSVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGLQ++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVGEPSVEDTIAILRGLQERYELHHHVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKP  +DKLERR+IQLK+E +A+K+E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPLPLDKLERRIIQLKLEQQALKKEDDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  +Q IK E+E  R ++ +A R  D   +S
Sbjct: 440 RLEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIKAELENARTQMEQARRAGDLNKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L +  + +        +  LL+ +V  EEIAE++SR TGIPVS++++
Sbjct: 500 ELQYGTIPALEKQLADADKSE------GKEMKLLRYRVTDEEIAEVLSRATGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRVVGQ EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEQELHKRVVGQSEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFMFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E      
Sbjct: 674 ILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQENRSLGY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA IQL  L  ++ +    + 
Sbjct: 734 EGMKEIVMSVVGQHFRPEFINRIDETVVFHPLAKENIKAIAQIQLARLAKRMAEHGYQIS 793

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
            S AAL  IS +G+D IYGAR +   K+++   +     ++P AN I  G L+   P ++
Sbjct: 794 FSDAALDFISEVGYDPIYGARPL---KRAIQQEI-----ENPLANEILSGKLLPSKPVTV 845

Query: 674 D 674
           D
Sbjct: 846 D 846


>gi|452124651|ref|ZP_21937235.1| ATP-dependent protease ATPase subunit [Bordetella holmesii F627]
 gi|452128044|ref|ZP_21940623.1| ATP-dependent protease ATPase subunit [Bordetella holmesii H558]
 gi|451923881|gb|EMD74022.1| ATP-dependent protease ATPase subunit [Bordetella holmesii F627]
 gi|451926259|gb|EMD76395.1| ATP-dependent protease ATPase subunit [Bordetella holmesii H558]
          Length = 867

 Score =  813 bits (2099), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/624 (62%), Positives = 521/624 (83%), Gaps = 3/624 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGL QRI+N EVP +L  K++L LD+A LLAG K+RGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLTQRIVNDEVPETLRGKRVLSLDLAALLAGAKFRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S +    I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLKELSQDDGQNIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVGEPDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEAA++I++EIDSKPE+MDKL+RR+IQLKIE EA+K+E D++SK+
Sbjct: 379 YITDRFLPDKAIDLIDEAASRIRMEIDSKPEVMDKLDRRIIQLKIEREAVKKETDDASKR 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I++E+ +L+ +Y + E+IWK EK  ++ +Q IKEEI++VR  + +  RK  +  ++
Sbjct: 439 RLAVIEEELERLQREYNDYEEIWKAEKAAVQCTQSIKEEIDRVRADMAELQRKGQFDKLA 498

Query: 314 KLKYGELNKLERILK--EKSQKDIQLPNNA-NKFTLLKTKVGSEEIAEIVSRTTGIPVSK 370
           +L+YG+L +LE  LK  + +++D++    A  K  LL+T+VG+EEIAE+VSR TGIPVSK
Sbjct: 499 ELQYGKLPELEARLKAADMAEEDVERAEVAGGKPRLLRTQVGAEEIAEVVSRATGIPVSK 558

Query: 371 IVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVG 430
           +++ ER+KLL++E+ L +RVVGQ+EA S V++AIRRSR+GL+D  +PYGSF+FLGPTGVG
Sbjct: 559 MMEGERDKLLHMEDALHQRVVGQEEACSLVADAIRRSRAGLADPSKPYGSFLFLGPTGVG 618

Query: 431 KTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKP 490
           KTEL + L+  +F++EE +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKP
Sbjct: 619 KTELTRALADFLFDSEEHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKP 678

Query: 491 YSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK 550
           YS++LLDE+EK + DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+ M  
Sbjct: 679 YSVVLLDEVEKTHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQQIQSMTG 738

Query: 551 GDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNM 610
              E+IK  VM E+K   RPEF+NRID+++VF  L+ ++I SIA IQ+  L  +L K  M
Sbjct: 739 KPYEVIKDVVMEELKQTLRPEFLNRIDEVVVFHALDAQHIESIARIQIRRLAERLEKQEM 798

Query: 611 DLKISKAALKKISNIGFDLIYGAR 634
            L+++  AL +I+ +GFD ++GAR
Sbjct: 799 QLEVTDTALSEIARVGFDPVFGAR 822


>gi|254427099|ref|ZP_05040806.1| ATPase, AAA family [Alcanivorax sp. DG881]
 gi|196193268|gb|EDX88227.1| ATPase, AAA family [Alcanivorax sp. DG881]
          Length = 863

 Score =  813 bits (2099), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/627 (60%), Positives = 509/627 (81%), Gaps = 9/627 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+A L+AG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKDKQVLSLDMAALIAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+   +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 258 KAVLNELGKQEGRIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGV+ITD AI+AA+ LS+R
Sbjct: 318 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEVHHGVDITDGAIIAAARLSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEA ++I++EIDS PE MD+L+RRLIQLK+E EA+++E D++S+K
Sbjct: 378 YITDRQLPDKAIDLIDEAGSRIRMEIDSMPEEMDRLDRRLIQLKMEREALRKEEDDASRK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI++LE +YA+LE+IW+ EK  ++ + + K E+E+ R+++ +A R  D   +S
Sbjct: 438 RLEKLEEEIDELEKQYADLEEIWQAEKAALQGAAEYKAELEQARVEMEQARRAGDLSRMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ +++   ++ Q         LL+ KV  EEIAE+V++ TGIPVSK+++
Sbjct: 498 ELQYGQIPELEKKVQDAQDREEQAQAETQ---LLRNKVTDEEIAEVVAKWTGIPVSKMLE 554

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +E  L  RVVGQDEA+ AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 555 GEKDKLLRMEEALHDRVVGQDEAVEAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 614

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE+VRRKPYS+
Sbjct: 615 LCKALANFLFDTEEAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTELVRRKPYSV 674

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT++VMTSNLGSD I+++   D 
Sbjct: 675 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQKLAGADA 734

Query: 554 ------EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLK 607
                 E +K AVM  V  +FRPEFINR+D+ +VF  L +  +  IA+IQL  L+ +L +
Sbjct: 735 QSGSDYEAMKSAVMEVVGSHFRPEFINRVDETVVFHPLAKDQLKGIASIQLGFLQKRLAE 794

Query: 608 MNMDLKISKAALKKISNIGFDLIYGAR 634
            ++ L +S  AL K+ + GFD +YGAR
Sbjct: 795 RDIGLALSNEALDKLVDAGFDPVYGAR 821


>gi|319786186|ref|YP_004145661.1| ATP-dependent chaperone ClpB [Pseudoxanthomonas suwonensis 11-1]
 gi|317464698|gb|ADV26430.1| ATP-dependent chaperone ClpB [Pseudoxanthomonas suwonensis 11-1]
          Length = 861

 Score =  813 bits (2099), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/625 (60%), Positives = 507/625 (81%), Gaps = 10/625 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+ GEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVKGEVPEQLKGKRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ N+  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLNDLAKNEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQY+EKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS R
Sbjct: 320 RQYVEKDAALERRFQKVFVGEPSVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRL+QLKI+ E +K+E D++SK+
Sbjct: 380 YIADRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLVQLKIQREMLKKEKDDASKQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I KLE ++++L ++WK EK  ++ + ++KE++E+ R+++  A R  D+  +S
Sbjct: 440 RLADLEADIEKLEREFSDLNEVWKSEKAALQGATRVKEQLEQARIELEAAQRAQDYARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG +  LE+ L   ++           F L++ KV  EEIAE+VSR TGIPVSK+++
Sbjct: 500 EIQYGRIPALEKQLAAAAE------AEKKDFKLVQDKVTEEEIAEVVSRWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RVVGQDEAI AVS+A+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEQQLHRRVVGQDEAIRAVSDAVRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++ E+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL
Sbjct: 614 LCKGLAEFLFDSAEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+   G 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDGS 733

Query: 553 KEI---IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
            E    +K AVM  V+ +FRPEFINR+D+I+VF  L++  I SIA IQL+ L+ +L +  
Sbjct: 734 PEAYVQMKAAVMGVVQAHFRPEFINRLDEIVVFHPLDKAQITSIARIQLHGLEKRLHERG 793

Query: 610 MDLKISKAALKKISNIGFDLIYGAR 634
           + L +S AAL+ + N+GFD +YGAR
Sbjct: 794 LKLDLSDAALELLGNVGFDPVYGAR 818


>gi|374621369|ref|ZP_09693901.1| ATP-dependent chaperone ClpB [Ectothiorhodospira sp. PHS-1]
 gi|373940502|gb|EHQ51047.1| ATP-dependent chaperone ClpB [Ectothiorhodospira sp. PHS-1]
          Length = 864

 Score =  812 bits (2098), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/622 (61%), Positives = 509/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI++GEVP  L  +++L LD+  L+AG K+RG+FE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVDGEVPEGLKDRRLLSLDMGALIAGAKFRGDFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  +I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLSDLAKQEGRVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKDAA ERRFQK+LV EP++E+TI+ILRGL+++YEVHHGVEITDPAIVAA+ LS+R
Sbjct: 320 RKYVEKDAALERRFQKVLVNEPNVEDTIAILRGLKERYEVHHGVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE MD+LERRLIQLKIE EA+++E DE+S K
Sbjct: 380 YITDRQLPDKAIDLVDEAASRIRMEIDSKPESMDRLERRLIQLKIEREALRKESDEASLK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI++LE +Y++L++IWK EK  +  +  IKEE+E+ RL++  A R  D   +S
Sbjct: 440 RLEALEGEIDRLEREYSDLDEIWKAEKAALSGTASIKEELERARLELETARRAGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L   +Q ++      ++  LL+ KV  EEIAE+VSR TGIPV+K+++
Sbjct: 500 ELQYGRIPELERQLDMAAQAEM------HEMRLLRNKVTDEEIAEVVSRWTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RVVGQDEA+ AV++AIRR+R+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEEALTRRVVGQDEAVRAVADAIRRARAGLSDPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+A +F+ +E+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LTKALAAFLFDTDEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRN++IVMTSNLGS  I+EM   + 
Sbjct: 674 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNSVIVMTSNLGSQLIQEMAGEEH 733

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K AVM  V  +FRPEFINR+D+++VF  L R  I +I  IQL+ L+ +L   ++ L
Sbjct: 734 YDQMKAAVMEVVGTHFRPEFINRVDEVVVFHPLGRDQIRAITTIQLDYLRRRLADRDLRL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +S+AAL ++   GFD +YGAR
Sbjct: 794 TVSEAALDRLGEAGFDPVYGAR 815


>gi|335425025|ref|ZP_08554016.1| ATP-dependent chaperone ClpB [Salinisphaera shabanensis E1L3A]
 gi|334886701|gb|EGM25048.1| ATP-dependent chaperone ClpB [Salinisphaera shabanensis E1L3A]
          Length = 861

 Score =  812 bits (2098), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/653 (60%), Positives = 520/653 (79%), Gaps = 12/653 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NP L+GEPGVGKTAIVEGLAQRIINGEVP SL  K++L+LD+  ++AG KYRGEFEDRL
Sbjct: 198 NNPTLVGEPGVGKTAIVEGLAQRIINGEVPESLRDKRVLVLDLGGMIAGAKYRGEFEDRL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  II+FIDE+HT++G GK EGS+DAGNMLKP L+RGELHCIGATTLNEY
Sbjct: 258 KGVLSDLSKQEGRIILFIDEIHTLVGAGKAEGSMDAGNMLKPALARGELHCIGATTLNEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+ IEKDAA ERRFQK++V+EPD+E+TI+ILRGL+++YEVHHGV+ITD AI+AA++LS R
Sbjct: 318 RENIEKDAALERRFQKVIVDEPDLEDTIAILRGLKERYEVHHGVDITDGAIIAAAKLSQR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+KI+IEIDSKPE +D+L+RRLIQLKIE +A+ +E DE SK 
Sbjct: 378 YITDRKLPDKAIDLIDEAASKIRIEIDSKPEELDRLDRRLIQLKIEKQALSKESDEGSKT 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +EIN+LE +Y++LE+IWK EK  +  +   +EE+E+ + ++  A R  D+  +S
Sbjct: 438 RLDRLDEEINELEREYSDLEEIWKSEKASVAGAANKREELEQAKKELEAAQRARDFDRMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L E +Q   Q P  A K  LL+  V  EE+AEIVSR TGIPV+++++
Sbjct: 498 ELQYGRIPQLERELAE-AQAAEQTP-AATK--LLRNNVTDEEVAEIVSRWTGIPVNRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RV+GQ+EA+SAVS+AIRRSRSGLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 AERDKLLRMEDSLHERVIGQNEAVSAVSDAIRRSRSGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+++  +F+ E +++RIDMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+
Sbjct: 614 LCKSIATFLFDTESAMVRIDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I+E+     
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQLIQELSDTSY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + ++ +VM  V  +FRPEFINRID+ +VF  L +  I  IA IQ+  L  +L +  + L 
Sbjct: 734 DTMRESVMEVVAQHFRPEFINRIDESVVFHPLAQAQIREIARIQMRELHTRLAERELTLD 793

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
           IS AA+ K++  GFD +YGAR +   K+S+  L+     ++P A  I  G+ +
Sbjct: 794 ISNAAVDKLAEAGFDPVYGARPL---KRSIQTLV-----ENPLAKRILAGEFV 838


>gi|254230259|ref|ZP_04923650.1| chaperone ClpB [Vibrio sp. Ex25]
 gi|262395161|ref|YP_003287015.1| ClpB protein [Vibrio sp. Ex25]
 gi|451977393|ref|ZP_21927478.1| chaperone ClpB [Vibrio alginolyticus E0666]
 gi|151937239|gb|EDN56106.1| chaperone ClpB [Vibrio sp. Ex25]
 gi|262338755|gb|ACY52550.1| ClpB protein [Vibrio sp. Ex25]
 gi|451929725|gb|EMD77457.1| chaperone ClpB [Vibrio alginolyticus E0666]
          Length = 857

 Score =  812 bits (2098), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/622 (60%), Positives = 507/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRI+N EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIVNNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+N+ E +YA LE++W  EK  +  +Q IK E+E+ R+ +  A R  D   +S
Sbjct: 440 RLKALNEELNEKEREYAELEEVWNTEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E++L  RVVGQ EA+S VSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEDVLHNRVVGQSEAVSVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFATLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+I+VF  L +++I SIA+IQL  L  +L +    L
Sbjct: 734 YQGIKSEVMDVVSKHFRPEFLNRVDEIVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S  AL  I+ +GFD +YGAR
Sbjct: 794 EVSDKALDLIAQVGFDPVYGAR 815


>gi|398876531|ref|ZP_10631686.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM67]
 gi|398204297|gb|EJM91101.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM67]
          Length = 854

 Score =  812 bits (2097), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/621 (61%), Positives = 509/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI + E +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIVRHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  ++  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KL+ +E LL +RV+GQDEA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLMKMEGLLHQRVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  + L+
Sbjct: 733 EAQRAAVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+ K+  +G+D +YGAR
Sbjct: 793 LSPEAMDKLIAVGYDPVYGAR 813


>gi|398883912|ref|ZP_10638859.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM60]
 gi|398195738|gb|EJM82767.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM60]
          Length = 854

 Score =  812 bits (2097), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/621 (61%), Positives = 509/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI + E +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIVRHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  ++  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KL+ +E LL +RV+GQDEA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLMKMEGLLHQRVIGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSVQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  + L+
Sbjct: 733 EAQRAAVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLTERELKLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+ K+  +G+D +YGAR
Sbjct: 793 LSPEAMDKLIAVGYDPVYGAR 813


>gi|406597401|ref|YP_006748531.1| ClpB protein [Alteromonas macleodii ATCC 27126]
 gi|407684414|ref|YP_006799588.1| ClpB protein [Alteromonas macleodii str. 'English Channel 673']
 gi|407688343|ref|YP_006803516.1| ClpB protein [Alteromonas macleodii str. 'Balearic Sea AD45']
 gi|406374722|gb|AFS37977.1| ClpB protein [Alteromonas macleodii ATCC 27126]
 gi|407246025|gb|AFT75211.1| ClpB protein [Alteromonas macleodii str. 'English Channel 673']
 gi|407291723|gb|AFT96035.1| ClpB protein [Alteromonas macleodii str. 'Balearic Sea AD45']
          Length = 858

 Score =  811 bits (2096), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/660 (58%), Positives = 527/660 (79%), Gaps = 18/660 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+F+DELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKEEGRVILFVDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHSVDITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE MD+LERR+IQLK+E +A+ +E D++S K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRLQIDSKPEEMDRLERRIIQLKLEEQALAKETDDASHK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I+ E  + E KYA LEK+W  EK  ++ +Q IK E+E+ +L +  A R SD   +S
Sbjct: 440 RLEMIELEREQAETKYAELEKVWLDEKDAMQGTQTIKGELEQAKLDLEIARRASDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE  L++ ++      N   + TLLK KV   EIA+++SR TGIPV+++++
Sbjct: 500 ELQYGRIPELEAKLEQAAE------NETRETTLLKNKVTDVEIADVLSRWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E++L KRVVGQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEDVLHKRVVGQEEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAGFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+++MTSNLGSD I++     +
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVVIMTSNLGSDIIQDKHNESQ 733

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K +VM+ V  +FRPEFINR+DDI+VF  L ++ I SIA IQL  L+ +L +    L
Sbjct: 734 YDDMKASVMSVVGQHFRPEFINRVDDIVVFHPLGKEQIKSIAKIQLASLRARLAEKGYKL 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
            +S AA+ K+++ GFD ++GAR +   K+++     ++  ++P A+ +  G+LI   P+S
Sbjct: 794 TLSAAAMDKLADAGFDPVFGARPL---KRAI-----QVQVENPLAHQLLAGELI---PES 842


>gi|91227643|ref|ZP_01261920.1| ClpB protein [Vibrio alginolyticus 12G01]
 gi|269966581|ref|ZP_06180662.1| clpB protein [Vibrio alginolyticus 40B]
 gi|91188422|gb|EAS74716.1| ClpB protein [Vibrio alginolyticus 12G01]
 gi|269828766|gb|EEZ83019.1| clpB protein [Vibrio alginolyticus 40B]
          Length = 857

 Score =  811 bits (2096), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/622 (60%), Positives = 507/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRI+N EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIVNNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+N+ E +YA LE++W  EK  +  +Q IK E+E+ R+ +  A R  D   +S
Sbjct: 440 RLKALNEELNEKEREYAELEEVWNTEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E++L  RVVGQ EA+S VSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEDVLHNRVVGQSEAVSVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFATLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+I+VF  L +++I SIA+IQL  L  +L +    L
Sbjct: 734 YQGIKSEVMDVVSKHFRPEFLNRVDEIVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S  AL  I+ +GFD +YGAR
Sbjct: 794 EVSDKALDLIAQVGFDPVYGAR 815


>gi|389808749|ref|ZP_10204912.1| ATP-dependent chaperone ClpB [Rhodanobacter thiooxydans LCS2]
 gi|388442473|gb|EIL98665.1| ATP-dependent chaperone ClpB [Rhodanobacter thiooxydans LCS2]
          Length = 865

 Score =  811 bits (2096), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/629 (60%), Positives = 507/629 (80%), Gaps = 14/629 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRII GEVP  L  +++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIIKGEVPEGLRDRRVLALDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ N+  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLNDLAKNEGQIILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS+R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D  SK+
Sbjct: 380 YISDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDSESKQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I KLE ++++L +IWK EK  ++ + ++KE+IE+   +++ A R+ D+  +S
Sbjct: 440 RLADLETDIGKLEREFSDLNEIWKSEKAALQGTTRVKEQIEQAHQELDAAQRQQDYAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG+L  LE+ L      + Q       F L++TKV +EEIAE+VSR TGIPVSK+++
Sbjct: 500 EIQYGKLPALEKQLAAAQAAETQ------DFKLVQTKVTAEEIAEVVSRWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL++E+ L KRVVGQDEA+ AVS+AIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLHMEDELHKRVVGQDEAVHAVSDAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+  ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALAEFMFDTTDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGS----DKIKEME 549
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS    D+++   
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQMIQDEVESNG 733

Query: 550 KGDKEI----IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKL 605
             D E     +K +V+  V+ +FRPEFINR+D+I+VFR L++  I +IA IQL  L+ +L
Sbjct: 734 SDDAEAQYTRMKASVLGVVQAHFRPEFINRLDEIVVFRPLDKTQIRAIAKIQLAYLEKRL 793

Query: 606 LKMNMDLKISKAALKKISNIGFDLIYGAR 634
            +  + + +S  AL  + N+GFD +YGAR
Sbjct: 794 AERQLKMDVSDDALALLGNVGFDPVYGAR 822


>gi|381157534|ref|ZP_09866768.1| ATP-dependent chaperone ClpB [Thiorhodovibrio sp. 970]
 gi|380881397|gb|EIC23487.1| ATP-dependent chaperone ClpB [Thiorhodovibrio sp. 970]
          Length = 867

 Score =  811 bits (2096), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/625 (62%), Positives = 501/625 (80%), Gaps = 11/625 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+A L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKTKRLLSLDMAALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + +II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLTDVARQEGNIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKDAA ERRFQK+LV EP +E+TI+ILRGL+++YEVHH VEITDPAI+AA+ LS+R
Sbjct: 320 RKYVEKDAALERRFQKVLVVEPSVEDTIAILRGLKERYEVHHAVEITDPAIIAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I++EIDS PE MDKL+RRLIQLKIE EA+K+E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASHIRMEIDSMPEEMDKLDRRLIQLKIEREALKKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI +LE ++++L +IW+ EK  ++ +  IKEE+++ R+++  A R  D   +S
Sbjct: 440 RLDDLQGEITRLEREFSDLNEIWQSEKAAVQGTAHIKEELDRARVEMETARRAGDLTRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   S  D     N     LL+ KV  EEIA+IVS+ T IPVSK+++
Sbjct: 500 ELQYGRIPELEKRLTTASASDTDQSGN----KLLRNKVTEEEIADIVSKWTNIPVSKMLE 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RVVGQ EA+SAVS+AIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 556 GEREKLLRMEEALARRVVGQQEAVSAVSDAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EES++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL
Sbjct: 616 LCKALAQFLFDTEESLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSL 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSD----KIKEME 549
           ILLDEIEKA+ DVFN+LLQ+LDDGRLTD +GRT++FRN+ IVMTSNLGSD    K  E  
Sbjct: 676 ILLDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNSAIVMTSNLGSDIIQQKAGEAN 735

Query: 550 KGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
            G+   +K AVM  ++  FRPEFINR+D+I+VF  L ++ I +IA IQL  L+ +L    
Sbjct: 736 YGE---MKDAVMEILRHAFRPEFINRLDEIVVFHPLGQEQIRAIARIQLEYLRARLASRE 792

Query: 610 MDLKISKAALKKISNIGFDLIYGAR 634
           + ++IS AAL  +   GFD +YGAR
Sbjct: 793 IGMQISDAALDHLGEAGFDPVYGAR 817


>gi|359396324|ref|ZP_09189376.1| Chaperone protein ClpB [Halomonas boliviensis LC1]
 gi|357970589|gb|EHJ93036.1| Chaperone protein ClpB [Halomonas boliviensis LC1]
          Length = 860

 Score =  811 bits (2096), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/623 (60%), Positives = 512/623 (82%), Gaps = 6/623 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  LLAG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKDKRVLSLDMGSLLAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLKELSQEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP  E+T++ILRGL+++YEVHHGV+ITD AI+AA++LS R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSEEDTVAILRGLKERYEVHHGVDITDSAIIAAAKLSTR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA++I++E+DSKPE MD+L+RRLIQLK+E EA+K+E D++SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAASRIRMELDSKPEAMDRLDRRLIQLKMEREALKKETDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +  +I++LE +YA+L++IWK EK  I+ + Q K ++E+ RL + +A R+ D   +S
Sbjct: 440 RLEALSTQIHELEREYADLDEIWKAEKASIQGAAQFKADLEQARLDLEQARRQGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG++ +LE+ + E  + +     + +   LL++ V  EEIAE+VSR TGIPVSK+++
Sbjct: 500 EIQYGKIPELEKKIAESGEGEA----DTSSHQLLRSNVTEEEIAEVVSRWTGIPVSKMLE 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQ+EA+ AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLRMEEALHERVIGQNEAVEAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKSLANFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           +LLDE+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSN+GSD I+ M  +  
Sbjct: 676 LLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNMGSDIIQRMGGDDS 735

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E +K  VM  V  +FRPE INRID+++VF  L ++ I +IA IQL  LK +L + ++ 
Sbjct: 736 DYEEMKNRVMEVVGNHFRPELINRIDEVVVFHALGQEQIQAIAGIQLERLKLRLAEHDLK 795

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L++S  A+ +++ +GFD +YGAR
Sbjct: 796 LEVSPEAMAQLAVVGFDPVYGAR 818


>gi|21232500|ref|NP_638417.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66767416|ref|YP_242178.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|188990519|ref|YP_001902529.1| ATP-dependent Clp protease [Xanthomonas campestris pv. campestris
           str. B100]
 gi|54035864|sp|Q8P6A0.1|CLPB_XANCP RecName: Full=Chaperone protein ClpB
 gi|21114288|gb|AAM42341.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66572748|gb|AAY48158.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167732279|emb|CAP50471.1| ATP-dependent Clp protease [Xanthomonas campestris pv. campestris]
          Length = 861

 Score =  811 bits (2096), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/628 (61%), Positives = 510/628 (81%), Gaps = 16/628 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S N+  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLSDLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++
Sbjct: 380 YITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+KLE ++++L ++WK EK  ++ + +IKE+IE  +L++  A R+ D+  +S
Sbjct: 440 RLADLESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +++YG L +LE        K + L N    + F L++ +V +EEIAE+VSR TGIPV+K+
Sbjct: 500 EIQYGVLPQLE--------KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKM 551

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ ER+KLL +E+ L +RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVGK
Sbjct: 552 LEGERDKLLRMEDELHRRVVGQEEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGK 611

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++ E++IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRR+PY
Sbjct: 612 TELCKALADFLFDSTEAMIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRRPY 671

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           SLILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+  G
Sbjct: 672 SLILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQEL-SG 730

Query: 552 DKEI-----IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLL 606
           D        +K AVM  V+ +FRPEFINR+DDI+VF  L++  I SIA IQL  L+ +L 
Sbjct: 731 DGSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLA 790

Query: 607 KMNMDLKISKAALKKISNIGFDLIYGAR 634
           +  + L +   AL+ + N+GFD +YGAR
Sbjct: 791 ERGLKLDLDDPALELLGNVGFDPVYGAR 818


>gi|408374171|ref|ZP_11171861.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
           hongdengensis A-11-3]
 gi|407766056|gb|EKF74503.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Alcanivorax
           hongdengensis A-11-3]
          Length = 861

 Score =  811 bits (2095), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/674 (58%), Positives = 532/674 (78%), Gaps = 16/674 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKDKQVLSLDMAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKQEGRIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGV+ITD AI+AA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVDITDGAIIAAARLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEA ++I++EIDS PE MD+L+RRLIQLK+E EA+++E DE+S+K
Sbjct: 380 YITDRQLPDKAIDLIDEAGSRIRMEIDSMPEEMDRLDRRLIQLKMEREALRKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI + E +YA+LE+IW+ EK  ++ +Q+ K E+E+ R+++ +A R  D   +S
Sbjct: 440 RLEKLEEEIAEQERQYADLEEIWQAEKAALQGAQEYKAELEQARVEMEQARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+  K +  +D +     ++  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPELEK--KVQQAQDQEEQQAQSENQLLRNKVTDEEIAEVVSKWTGIPVSKMLE 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +E  L +RVVGQDEA+ AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 558 GEKDKLLRMEEALHQRVVGQDEAVEAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LCKALANFLFDTEEAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT++VMTSNLGSD I+++    D
Sbjct: 678 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQKLAGDND 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E +K AVM  V  +FRPEFINR+D+ +VF  L +  +  IA+IQL+ L+ +L + ++ L
Sbjct: 738 YEAMKAAVMEVVGNHFRPEFINRVDETVVFHPLQKDQLKGIASIQLDFLRKRLAERDIRL 797

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
           ++S AAL K+   GFD +YGAR +   K+++   L     ++P A  +  G+        
Sbjct: 798 ELSDAALSKLVEAGFDPVYGARPL---KRAIQQQL-----ENPLAQALLKGEFAQG---- 845

Query: 673 LDTLRMVYSMRNYA 686
            DT+R+  S   Y+
Sbjct: 846 -DTIRVDVSESGYS 858


>gi|28897335|ref|NP_796940.1| ClpB protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|153839763|ref|ZP_01992430.1| chaperone ClpB [Vibrio parahaemolyticus AQ3810]
 gi|260364016|ref|ZP_05776747.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
           K5030]
 gi|260876298|ref|ZP_05888653.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
           AN-5034]
 gi|260895105|ref|ZP_05903601.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
           Peru-466]
 gi|417321417|ref|ZP_12107957.1| ClpB protein [Vibrio parahaemolyticus 10329]
 gi|433656841|ref|YP_007274220.1| ClpB protein [Vibrio parahaemolyticus BB22OP]
 gi|54035833|sp|Q87S63.1|CLPB_VIBPA RecName: Full=Chaperone protein ClpB
 gi|28805544|dbj|BAC58824.1| ClpB protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|149746716|gb|EDM57704.1| chaperone ClpB [Vibrio parahaemolyticus AQ3810]
 gi|308088902|gb|EFO38597.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
           Peru-466]
 gi|308092911|gb|EFO42606.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
           AN-5034]
 gi|308115632|gb|EFO53172.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
           K5030]
 gi|328472097|gb|EGF42974.1| ClpB protein [Vibrio parahaemolyticus 10329]
 gi|432507529|gb|AGB09046.1| ClpB protein [Vibrio parahaemolyticus BB22OP]
          Length = 857

 Score =  811 bits (2095), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/622 (60%), Positives = 506/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRI+N EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIVNNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +  E+N+ E +YA LE++W  EK  +  +Q IK E+E+ R+ +  A R  D   +S
Sbjct: 440 RLQALNDELNEKEREYAELEEVWNTEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E++L  RVVGQ EA++ VSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEDVLHNRVVGQSEAVAVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFATLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+I+VF  L +++I SIA+IQL  L  +L +    L
Sbjct: 734 YQGIKSEVMDVVSKHFRPEFLNRVDEIVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S  AL  I+ +GFD +YGAR
Sbjct: 794 EVSDKALDLIAQVGFDPVYGAR 815


>gi|384429028|ref|YP_005638388.1| chaperone ClpB [Xanthomonas campestris pv. raphani 756C]
 gi|341938131|gb|AEL08270.1| chaperone ClpB [Xanthomonas campestris pv. raphani 756C]
          Length = 859

 Score =  811 bits (2095), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/628 (61%), Positives = 510/628 (81%), Gaps = 16/628 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S N+  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 258 KAVLSDLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS R
Sbjct: 318 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++
Sbjct: 378 YITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+KLE ++++L ++WK EK  ++ + +IKE+IE  +L++  A R+ D+  +S
Sbjct: 438 RLADLESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +++YG L +LE        K + L N    + F L++ +V +EEIAE+VSR TGIPV+K+
Sbjct: 498 EIQYGVLPQLE--------KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKM 549

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ ER+KLL +E+ L +RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVGK
Sbjct: 550 LEGERDKLLRMEDELHRRVVGQEEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGK 609

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++ E++IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRR+PY
Sbjct: 610 TELCKALADFLFDSTEAMIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRRPY 669

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           SLILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+  G
Sbjct: 670 SLILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQEL-SG 728

Query: 552 DKEI-----IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLL 606
           D        +K AVM  V+ +FRPEFINR+DDI+VF  L++  I SIA IQL  L+ +L 
Sbjct: 729 DGSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLA 788

Query: 607 KMNMDLKISKAALKKISNIGFDLIYGAR 634
           +  + L +   AL+ + N+GFD +YGAR
Sbjct: 789 ERGLKLDLDDPALELLGNVGFDPVYGAR 816


>gi|359787428|ref|ZP_09290476.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas sp.
           GFAJ-1]
 gi|359295309|gb|EHK59583.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas sp.
           GFAJ-1]
          Length = 859

 Score =  811 bits (2095), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/623 (60%), Positives = 510/623 (81%), Gaps = 6/623 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  LLAG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKDKRVLSLDMGSLLAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLKELSQEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP  E+T++ILRGL+++YEVHHGV+ITD AI+AA++LS R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSEEDTVAILRGLKERYEVHHGVDITDSAIIAAAKLSTR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++E+DSKPE MD+L+RRLIQLK+E EA+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMELDSKPEEMDRLDRRLIQLKMEREALKKETDEATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +  +I++LE +YA+L++IWK EK  I+ + Q K E+E+ R+ + +A R+ D   +S
Sbjct: 440 RLDALNNQIHELEREYADLDEIWKAEKASIQGAAQFKAELEQARIDLEQARRQGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG++  LE+ + E  + +    ++     LL++ V  EEIAE+VSR TGIPVSK+++
Sbjct: 500 EIQYGKIPALEKKISEAGEGEADTASH----QLLRSNVTEEEIAEVVSRWTGIPVSKMLE 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQ EA+ AV+NA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLRMEEALHERVIGQHEAVEAVANAVRRSRAGLADPNRPNGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKSLANFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           +LLDE+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSN+GSD I+ M  +  
Sbjct: 676 LLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNMGSDIIQRMGGDDN 735

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E++K  VM  V  +FRPE INRID+++VF  L +  I +IA IQL  LK +L + ++ 
Sbjct: 736 DYEVMKSTVMEVVGNHFRPELINRIDEVVVFHALGQTQIQAIAGIQLERLKARLAEHDLS 795

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L+IS  A+ +++ +GFD +YGAR
Sbjct: 796 LEISDDAMAQLAVVGFDPVYGAR 818


>gi|407792049|ref|ZP_11139122.1| clpB protein [Gallaecimonas xiamenensis 3-C-1]
 gi|407198214|gb|EKE68253.1| clpB protein [Gallaecimonas xiamenensis 3-C-1]
          Length = 857

 Score =  811 bits (2094), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/622 (60%), Positives = 512/622 (82%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDLGALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KALLNELAKEEGQVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYEIHHSVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLERRMIQLKLERQALTKETDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L+++E+  L+ +Y  L++IW  EK  +  +QQIK ++E+ R ++  A R ++++ +S
Sbjct: 440 RLNLLEEELADLDGRYEELDEIWNTEKAALSGTQQIKAQLEEARQELEIARRAANYERMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   S  ++Q      + TLLK KV   EIAE+VSR TGIPV+K+++
Sbjct: 500 ELQYGRIPELEKQLDLASAAEMQ------EMTLLKHKVSDGEIAEVVSRWTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L KRVVGQ+EA++AV+NAIRRSR+GLSD +RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLQMEDNLHKRVVGQEEAVTAVANAIRRSRAGLSDPRRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ +++++R+DMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALAEFLFDTDDAMVRLDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD++GRT++FRNT+++MTSNLGS +I+E   K D
Sbjct: 674 ILLDEVEKAHPDVFNLLLQVLDDGRLTDSQGRTVDFRNTVVIMTSNLGSARIQEHAGKED 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E++K  VM+EV  +FRPEFINRID+ +VF  L+ + I  IA IQL  LK +L + +  L
Sbjct: 734 YEVMKAMVMDEVGHHFRPEFINRIDETVVFHPLSDQVIRQIATIQLAGLKKRLAERDYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S  AL  ++  GFD ++GAR
Sbjct: 794 ELSDGALDLLAEAGFDPLFGAR 815


>gi|289209193|ref|YP_003461259.1| ATP-dependent chaperone ClpB [Thioalkalivibrio sp. K90mix]
 gi|288944824|gb|ADC72523.1| ATP-dependent chaperone ClpB [Thioalkalivibrio sp. K90mix]
          Length = 862

 Score =  811 bits (2094), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 398/654 (60%), Positives = 522/654 (79%), Gaps = 10/654 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  LLAG KYRG+FE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKDKRVLALDLGALLAGAKYRGDFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S  +  +I+FIDE+HT++G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KSVLKELSQEEGRVILFIDEIHTLVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ IEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHG+EITDPAIVAA++LS R
Sbjct: 320 RQNIEKDAALERRFQKVLVDEPTLEDTIAILRGLKERYEVHHGIEITDPAIVAAAQLSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+EIDSKPE MD+LERRLIQLKIE EA+K+E D++SKK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIKMEIDSKPESMDRLERRLIQLKIEREALKKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI +LE +Y++LE++WK EK  +  + Q+KEE+E+ R+++  A R  D   +S
Sbjct: 440 RLDTLQEEIERLEREYSDLEEVWKSEKASVSGAAQLKEELERARMELETARRAGDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L    + + Q      +  LL+TKV  EE+AE+VSR TGIPVSK+++
Sbjct: 500 ELQYGRIPDLEKSLAMAHEMESQ------ETKLLRTKVTDEEVAEVVSRWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +E  +  RVVGQ EA++AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKDKLLRMEEAIGARVVGQSEAVNAVANAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGYIGYEEGGYLTE VRRKPYS+
Sbjct: 614 LTKALASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYIGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD  GRT++FRNT+IVMTSNLGS +I+EM   + 
Sbjct: 674 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGHGRTVDFRNTVIVMTSNLGSQQIQEMAGEEN 733

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K AVM  V  +FRPEFINR+DD++VF  L R+ I +IA+IQL  L+ +L + ++ +
Sbjct: 734 YDAMKAAVMEIVGQHFRPEFINRVDDVVVFHPLEREQIRAIADIQLQYLRKRLEERDLSI 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            I+ AAL  +   GFD +YGAR +   K+++   L+    +S  A     GD I
Sbjct: 794 TITDAALDHLGAAGFDPVYGARPL---KRAIQTQLENPLAQSLLAGEFGPGDTI 844


>gi|438000238|ref|YP_007183971.1| ATP-dependent Clp protease ATP-binding protein subunit ClpB
           [Candidatus Kinetoplastibacterium blastocrithidii (ex
           Strigomonas culicis)]
 gi|451812776|ref|YP_007449229.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
           Kinetoplastibacterium blastocrithidii TCC012E]
 gi|429339472|gb|AFZ83894.1| ATP-dependent Clp protease ATP-binding protein subunit ClpB
           [Candidatus Kinetoplastibacterium blastocrithidii (ex
           Strigomonas culicis)]
 gi|451778745|gb|AGF49625.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
           Kinetoplastibacterium blastocrithidii TCC012E]
          Length = 861

 Score =  811 bits (2094), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/621 (62%), Positives = 509/621 (81%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP++L  K++L LD+A L+AG K+RGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPDNLRDKRVLSLDLASLIAGAKFRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+IS  + + I+FIDELHT++G GK EGSIDAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLKDISA-ESNSILFIDELHTIMGAGKAEGSIDAGNMLKPALARGELHCIGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK++V+EP++E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS R
Sbjct: 318 RRYIEKDAALERRFQKVIVDEPNVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSNR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEA A+I++EIDSKPE MDKLERR+IQLKIE EA+K+E DE SKK
Sbjct: 378 YITDRFLPDKAIDLIDEAGARIRMEIDSKPEAMDKLERRIIQLKIEREAVKKESDEVSKK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  I+ E+NK++ +Y + EKIWK EK +++ ++ IKEEI+ +R K+ +  R   +  ++
Sbjct: 438 RLYSIEDELNKIQKEYDDYEKIWKSEKNIVEGTKNIKEEIDSLRAKMAELQRNGQYDRLA 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+Y +L +LE  LK      I    +  KF LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 498 ELQYSKLPELEERLKSAESYSINQSED-KKFKLLRTQVGAEEIAEVVSRATGIPVSKMMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++ N L  R++GQ EA++AVS++I R+R+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 557 GEREKLLHMSNFLSSRIIGQSEAVNAVSDSILRARAGLSDQSRPSGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++ + +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LAKALADFMFDSRDHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD+ GRT++FRNTII+MTSNLGS+ I+ M     
Sbjct: 677 VLLDEVEKAHLDVFNVLLQVLDDGRLTDSHGRTVDFRNTIIIMTSNLGSNHIQNMMDSTY 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             I+  +M E+K   RPEF+NRID+I+ F  L  + + SI  IQ++ LK++L + N+ + 
Sbjct: 737 NEIRDVIMEELKATLRPEFLNRIDEIVFFHSLKLEQMNSIVRIQIDQLKDRLKQKNIYID 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           I++ A+  ++  GFD+++GAR
Sbjct: 797 IAEDAILMLAKNGFDVVFGAR 817


>gi|399910053|ref|ZP_10778367.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas sp.
           KM-1]
          Length = 860

 Score =  811 bits (2094), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/623 (60%), Positives = 515/623 (82%), Gaps = 6/623 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  LLAG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKDKRVLSLDMGSLLAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLKELAQEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP  E+T++ILRGL+++YEVHH V+ITD AI+AA++LS R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSEEDTVAILRGLKERYEVHHKVDITDGAIIAAAKLSTR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEA+++I++E+DSKPE MD+L+RRLIQLK+E E +K+E DE+S+K
Sbjct: 380 YITDRQLPDKAIDLIDEASSRIRMELDSKPEEMDRLDRRLIQLKMEREHLKKETDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++++I++LE +YA+L++IWK EK  I+ + Q KEE+EK ++++ +A RK D   +S
Sbjct: 440 RLESLQEQIDELEREYADLDEIWKAEKASIQGAGQFKEELEKAKIELEQAQRKGDLTRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ + E S+ +     + +K  LL++ V  EEIAE+VSR TGIPV+K+++
Sbjct: 500 ELRYGVIPELEKKITESSEAEA----DTSKHKLLRSSVTEEEIAEVVSRWTGIPVAKMLE 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQ+EA++AV+NA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLRMEEALHRRVIGQEEAVTAVANAVRRSRAGLADPNRPNGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKALANFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSN+GSD I+ +   D 
Sbjct: 676 LLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNMGSDIIQRLGGDDT 735

Query: 554 --EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E +K AVM+ V ++FRPE INRID+++VF  L +  I +IA IQL+ L+ +L +  M 
Sbjct: 736 KYEEMKQAVMDVVGMHFRPELINRIDEVVVFHALRQAQIEAIAGIQLDRLRARLAEHGMQ 795

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L++S  A+ +++  GFD ++GAR
Sbjct: 796 LEVSDEAMAQLALAGFDPVFGAR 818


>gi|407700657|ref|YP_006825444.1| ClpB protein [Alteromonas macleodii str. 'Black Sea 11']
 gi|407249804|gb|AFT78989.1| ClpB protein [Alteromonas macleodii str. 'Black Sea 11']
          Length = 858

 Score =  811 bits (2094), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/660 (58%), Positives = 527/660 (79%), Gaps = 18/660 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+F+DELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKEEGRVILFVDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHSVDITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE MD+LERR+IQLK+E +A+ +E D++S K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRLQIDSKPEEMDRLERRIIQLKLEEQALAKETDDASHK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I+ E  + E KYA LEK+W  EK  ++ +Q IK E+E+ +L +  A R SD   +S
Sbjct: 440 RLEMIELEREQAETKYAELEKVWLDEKDAMQGTQTIKGELEQAKLDLEIARRASDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE  L++ ++      N   + TLLK KV   EIA+++SR TGIPV+++++
Sbjct: 500 ELQYGRIPELEAKLEQAAE------NETRETTLLKNKVTDVEIADVLSRWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E++L KRVVGQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEDVLHKRVVGQEEAVQAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAGFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+++MTSNLGSD I++     +
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVVIMTSNLGSDIIQDKHNESQ 733

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K +VM+ V  +FRPEFINR+DDI+VF  L ++ I SIA IQL  L+ +L +    L
Sbjct: 734 YDDMKASVMSVVGQHFRPEFINRVDDIVVFHPLGKEQIKSIAKIQLASLRARLAEKGYKL 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
            ++ AA+ K+++ GFD ++GAR +   K+++     ++  ++P A+ +  G+LI   P+S
Sbjct: 794 TLTAAAMDKLADAGFDPVFGARPL---KRAI-----QVQVENPLAHQLLAGELI---PES 842


>gi|53802726|ref|YP_115493.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Methylococcus
           capsulatus str. Bath]
 gi|53756487|gb|AAU90778.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Methylococcus
           capsulatus str. Bath]
          Length = 859

 Score =  811 bits (2094), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/623 (61%), Positives = 500/623 (80%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  +  K++L LD+A L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGVKGKRLLALDMAGLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I+  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDIAKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGV ITDPAIVAA+ LS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEVHHGVTITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE MD+L+RRLIQL+IE EA+K+E DE+SKK
Sbjct: 380 YITDRQLPDKAIDLVDEAASRIRMEIDSKPEEMDRLDRRLIQLRIEREALKKETDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI KLE +YA+LE+IWK EK  +  +  IKEE+EK RL ++ A R  D     
Sbjct: 440 RLEALEGEIGKLEKEYADLEEIWKSEKARLSGAASIKEELEKARLDLDNAKRSGDLTRAG 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++Y  +  LE+ L       +      ++F LL+ KV  EEIAE+VS+ TGIPV+K+++
Sbjct: 500 QIQYERIPALEKRLA------VAEAGEDSEFRLLRNKVTDEEIAEVVSKWTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E  L +RVVGQ EAI+AV+NAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLHMEENLSRRVVGQQEAITAVANAIRRSRAGLADPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ +E+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTDEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD  GRT++FRN ++VMTSNLGS++I+E+  G+ 
Sbjct: 674 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGHGRTVDFRNAVVVMTSNLGSNRIQEL-AGEA 732

Query: 554 EI--IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
               +K  VM  V  YFRPEFINRID+ +VF  L R+ I +IA +Q+  L+ +L    + 
Sbjct: 733 HYAEMKAEVMEIVGQYFRPEFINRIDEAVVFHPLGREQIRAIARLQVRHLQERLEARELS 792

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +S AAL  +   GFD +YGAR
Sbjct: 793 LVVSDAALDLLGEAGFDPVYGAR 815


>gi|260903275|ref|ZP_05911670.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
           AQ4037]
 gi|308107960|gb|EFO45500.1| ATP-dependent chaperone protein ClpB [Vibrio parahaemolyticus
           AQ4037]
          Length = 823

 Score =  811 bits (2094), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/622 (60%), Positives = 506/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRI+N EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 166 NNPVIIGEPGVGKTAIVEGLAQRIVNNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 225

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 226 KSVLNELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 285

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 286 RQYIEKDAALERRFQKVLVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHR 345

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 346 YISDRQLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEK 405

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +  E+N+ E +YA LE++W  EK  +  +Q IK E+E+ R+ +  A R  D   +S
Sbjct: 406 RLQALNDELNEKEREYAELEEVWNTEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMS 465

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 466 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLE 519

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E++L  RVVGQ EA++ VSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 520 AEKEKLLRMEDVLHNRVVGQSEAVAVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 579

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 580 LCKTLASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 639

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 640 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFATLD 699

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+I+VF  L +++I SIA+IQL  L  +L +    L
Sbjct: 700 YQGIKSEVMDVVSKHFRPEFLNRVDEIVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQL 759

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S  AL  I+ +GFD +YGAR
Sbjct: 760 EVSDKALDLIAQVGFDPVYGAR 781


>gi|448747291|ref|ZP_21728952.1| Chaperonin ClpB [Halomonas titanicae BH1]
 gi|445565203|gb|ELY21315.1| Chaperonin ClpB [Halomonas titanicae BH1]
          Length = 885

 Score =  811 bits (2094), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/628 (60%), Positives = 512/628 (81%), Gaps = 11/628 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  LLAG K+RGEFE+RL
Sbjct: 220 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKEKRVLSLDMGSLLAGAKFRGEFEERL 279

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 280 KAVLKELSQEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 339

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP  E+T++ILRGL+++YEVHHGV+ITD AI+AA++LS R
Sbjct: 340 RKYIEKDAALERRFQKVLVDEPSEEDTVAILRGLKERYEVHHGVDITDSAIIAAAKLSTR 399

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++E+DSKPE MD+L+RRLIQLK+E EA+K+E DE++KK
Sbjct: 400 YITDRQLPDKAIDLIDEAASRIRMELDSKPEAMDRLDRRLIQLKMEREALKKETDEATKK 459

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +  +I++LE +YA+L++IWK EK  I+ + Q K E+E+ R+ + +A R+ D   +S
Sbjct: 460 RLEALNTQIHELEREYADLDEIWKAEKASIQGAAQFKAELEQARIDLEQARRQGDLGRMS 519

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG++ +LE+ + E  + +     + +   LL++ V  EEIAE+VSR TGIPVSK+++
Sbjct: 520 EIQYGKIPELEKKIAESGEGEA----DTSSHQLLRSNVTEEEIAEVVSRWTGIPVSKMLE 575

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQDEA+ AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 576 GERDKLLRMEEALHQRVIGQDEAVEAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 635

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 636 LCKSLANFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 695

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM----- 548
           +LLDE+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSN+GSD I+ M     
Sbjct: 696 LLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNMGSDIIQRMGGDVS 755

Query: 549 --EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLL 606
             +  D E +K  VM  V  +FRPE INRID+++VF  L ++ I +IA IQL  LK +L 
Sbjct: 756 ADKDSDYESMKNMVMEVVGNHFRPELINRIDEVVVFHALGQEQIQAIAGIQLERLKVRLA 815

Query: 607 KMNMDLKISKAALKKISNIGFDLIYGAR 634
           + ++ L++S  A+ +++ +GFD +YGAR
Sbjct: 816 EHDLKLEVSPEAMAQLAVVGFDPVYGAR 843


>gi|387769285|ref|ZP_10125549.1| ATP-dependent chaperone protein ClpB [Pasteurella bettyae CCUG
           2042]
 gi|386906918|gb|EIJ71639.1| ATP-dependent chaperone protein ClpB [Pasteurella bettyae CCUG
           2042]
          Length = 856

 Score =  811 bits (2094), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/661 (58%), Positives = 524/661 (79%), Gaps = 14/661 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLKELAQEEGKVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVDEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+K+E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALKKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA L++IWK EK  +  +Q IK E+E VR+++ +A R  D   +S
Sbjct: 440 RLTMLEKELAEKEREYAELDEIWKSEKATLSGTQHIKAELENVRMQMEQARRAGDLNKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L + ++ +        + TLL+ +V  EEIAE++SR TGIPVS++++
Sbjct: 500 ELQYGVIPTLEKQLSDANKAE------GKEMTLLRNRVTDEEIAEVLSRATGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L KRV+GQ EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEDELHKRVIGQGEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFMFDDEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  +    
Sbjct: 674 ILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNQDLGY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K  VM+ V  +FRPEFINRID+ +VF  L ++NI SIA IQL  L  ++ +   D+ 
Sbjct: 734 DGMKELVMSVVGQHFRPEFINRIDETVVFHPLAKENIKSIAQIQLARLIKRMAEHGYDIH 793

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
            S A L  IS +G+D IYGAR +   K+++   +     ++P A  I  G L+   P ++
Sbjct: 794 FSDATLDFISEVGYDPIYGARPL---KRAIQQEI-----ENPLAQQILSGKLLPASPVTV 845

Query: 674 D 674
           D
Sbjct: 846 D 846


>gi|433677810|ref|ZP_20509745.1| ATP-dependent Clp protease subunit [Xanthomonas translucens pv.
           translucens DSM 18974]
 gi|430817074|emb|CCP40175.1| ATP-dependent Clp protease subunit [Xanthomonas translucens pv.
           translucens DSM 18974]
          Length = 861

 Score =  810 bits (2093), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/626 (60%), Positives = 510/626 (81%), Gaps = 12/626 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLRGRRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK +G++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 260 KGVLNDLSKTEGQVILFIDELHTMVGAGKADGAMDAGNMLKPALSRGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++
Sbjct: 380 YIADRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+KL+ ++++L+++W+ EK  ++ + +IKE+IE+ R+++  A R+ D+  +S
Sbjct: 440 RLADLESDIDKLQREFSDLDEVWRSEKATLQGATRIKEQIEQARVELEAAQRRQDYAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG L  LE+ L      +       + FTL++ +V +EEIAE+VSR TGIPV+++++
Sbjct: 500 EIQYGLLPNLEKQLAAAGDAE------HHDFTLVQDRVTAEEIAEVVSRWTGIPVNRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RVVGQ EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEDELHRRVVGQQEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL
Sbjct: 614 LCKALAEFLFDSSEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+  GD 
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQEL-SGDG 732

Query: 554 EI-----IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKM 608
                  +K AVM  V+ +FRPEFINR+DDI+VF  L++  I SIA IQL  L  +L + 
Sbjct: 733 SAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLGGLDKRLAER 792

Query: 609 NMDLKISKAALKKISNIGFDLIYGAR 634
            + +++S  AL+ + N+GFD +YGAR
Sbjct: 793 GLKIELSDRALELLGNVGFDPVYGAR 818


>gi|380513637|ref|ZP_09857044.1| ATP-dependent clp protease subunit protein [Xanthomonas sacchari
           NCPPB 4393]
          Length = 861

 Score =  810 bits (2093), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/626 (60%), Positives = 513/626 (81%), Gaps = 12/626 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ N+  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++
Sbjct: 380 YITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I KLE ++++L+++WK EK  ++ + +IKE+IE+ R+++  A R+ D+  +S
Sbjct: 440 RLADLESDIAKLEREFSDLDEVWKSEKAALQGATKIKEQIEQARVELEAAQRRQDYAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG L  LE+ L   ++ +       + F L++ +V +EEIAE+VSR TGIPV+K+++
Sbjct: 500 EIQYGLLPNLEKQLAAANEAE------QHDFKLVQDRVTAEEIAEVVSRWTGIPVNKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEDELHQRVVGQEEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++ +++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL
Sbjct: 614 LCKALAEFLFDSSDAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+  GD 
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQEL-SGDG 732

Query: 554 EI-----IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKM 608
                  +K AVM  V+ +FRPEFINR+DDI+VF  L++  I SIA IQL+ L+ +L + 
Sbjct: 733 SAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLHGLEKRLAER 792

Query: 609 NMDLKISKAALKKISNIGFDLIYGAR 634
            + +++   AL+ + N+GFD +YGAR
Sbjct: 793 GLKIELGDRALELLGNVGFDPVYGAR 818


>gi|325916266|ref|ZP_08178547.1| ATP-dependent chaperone ClpB [Xanthomonas vesicatoria ATCC 35937]
 gi|325537560|gb|EGD09275.1| ATP-dependent chaperone ClpB [Xanthomonas vesicatoria ATCC 35937]
          Length = 859

 Score =  810 bits (2092), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/627 (61%), Positives = 510/627 (81%), Gaps = 14/627 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S N+  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 258 KAVLSDLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS R
Sbjct: 318 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++
Sbjct: 378 YITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+KLE ++++L ++WK EK  ++ + ++KE+IE  +L++  A R+ D+  +S
Sbjct: 438 RLADLETDIDKLEREFSDLNEVWKSEKAALQGTTKVKEQIEHAKLELEAAQRRQDYAKMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +++YG L +LE        K + L N    + F L++ +V +EEIAE+VSR TGIPV+K+
Sbjct: 498 EIQYGVLPQLE--------KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKM 549

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ ER+KLL +E+ L  RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVGK
Sbjct: 550 LEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGK 609

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++ E++IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRR+PY
Sbjct: 610 TELCKALADFLFDSTEAMIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRRPY 669

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           SLILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+   
Sbjct: 670 SLILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGD 729

Query: 552 DKE----IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLK 607
           D       +K AVM  V+ +FRPEFINR+DDI+VF  L++  I SIA IQL+ L+ +L +
Sbjct: 730 DSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLHGLEKRLSE 789

Query: 608 MNMDLKISKAALKKISNIGFDLIYGAR 634
             + L +  AAL+ + N+GFD +YGAR
Sbjct: 790 RGLKLDLDDAALELLGNVGFDPVYGAR 816


>gi|78048880|ref|YP_365055.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78037310|emb|CAJ25055.1| ATP-dependent Clp protease subunit [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 861

 Score =  810 bits (2092), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/627 (61%), Positives = 508/627 (81%), Gaps = 14/627 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S N+  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLSDLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++
Sbjct: 380 YITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+KLE ++++L ++WK EK  ++ + +IKE+IE  +L++  A R+ D+  +S
Sbjct: 440 RLADLESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +++YG L +LE        K + L N    + F L++ +V +EEIAE+VSR TGIPV+K+
Sbjct: 500 EIQYGVLPQLE--------KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKM 551

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ ER+KLL +E+ L  RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVGK
Sbjct: 552 LEGERDKLLRMEDDLHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGK 611

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PY
Sbjct: 612 TELCKALADFLFDSTEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPY 671

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           SLILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+   
Sbjct: 672 SLILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGD 731

Query: 552 DKE----IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLK 607
           D       +K AVM  V+ +FRPEFINR+DDI+VF  L++  I SIA IQL  L+ +L +
Sbjct: 732 DSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAE 791

Query: 608 MNMDLKISKAALKKISNIGFDLIYGAR 634
             + L +  AAL+ + N+GFD +YGAR
Sbjct: 792 RGLKLDLDDAALEVLGNVGFDPVYGAR 818


>gi|389796255|ref|ZP_10199311.1| ATP-dependent chaperone ClpB [Rhodanobacter sp. 116-2]
 gi|388448895|gb|EIM04875.1| ATP-dependent chaperone ClpB [Rhodanobacter sp. 116-2]
          Length = 863

 Score =  810 bits (2092), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/627 (60%), Positives = 509/627 (81%), Gaps = 12/627 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRII GEVP  L  +++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIIKGEVPEGLRDRRVLALDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLSDLSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP++E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS+R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPNVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D  SK+
Sbjct: 380 YIADRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDSESKQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I KLE ++++L +IWK EK  ++ + ++KE+IE+ R +++ A R+ D+  +S
Sbjct: 440 RLADLETDIGKLEREFSDLNEIWKSEKAALQGTTKVKEQIEQARQELDAAQRRQDYAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG+L +LE+ L      + Q       F L++T+V +EEIAE+VSR TGIPV+K+++
Sbjct: 500 EIQYGKLPELEKQLAAAQAAETQ------DFRLVQTRVTAEEIAEVVSRWTGIPVNKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL++E+ L +RVVGQDEA+ AVS+AIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLHMEDALHQRVVGQDEAVHAVSDAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+  ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALAEFMFDTTDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--G 551
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I++  +  G
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQMIQDAAESNG 733

Query: 552 DKE----IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLK 607
           D E     +K +V+  V+ +FRPEFINR+D+I+VFR L++  I +IA IQL  L+ +L +
Sbjct: 734 DAEEQYTQMKASVLGVVQAHFRPEFINRLDEIVVFRPLDKSQIRAIAKIQLEYLEKRLAE 793

Query: 608 MNMDLKISKAALKKISNIGFDLIYGAR 634
             + L +   AL  + N+GFD +YGAR
Sbjct: 794 RQLKLDVGDDALALLGNVGFDPVYGAR 820


>gi|390949641|ref|YP_006413400.1| ATP-dependent chaperone ClpB [Thiocystis violascens DSM 198]
 gi|390426210|gb|AFL73275.1| ATP-dependent chaperone ClpB [Thiocystis violascens DSM 198]
          Length = 866

 Score =  810 bits (2092), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/622 (60%), Positives = 504/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+A L+AG K+RGEFE+RL
Sbjct: 201 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKTKRLLSLDMAALIAGAKFRGEFEERL 260

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I   +  +I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 261 KAVLNDIGRQEGQVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEY 320

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKDAA ERRFQK+LV+EP++E+TI+ILRGL+++YEVHH VEITDPAIVAA+ LS+R
Sbjct: 321 RKYVEKDAALERRFQKVLVDEPNVEDTIAILRGLKERYEVHHAVEITDPAIVAAAVLSHR 380

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDS PE MDKL RRLIQLKIE  A+K+E DE+S+K
Sbjct: 381 YIADRQLPDKAIDLIDEAASQIRMEIDSMPEEMDKLSRRLIQLKIERMALKKESDEASRK 440

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I +LE ++A+L++IWK EK  ++ +  IKE +++ R+++  A R SD   +S
Sbjct: 441 RLSDLEGQIERLEREFADLDEIWKSEKAAVQGTAHIKEALDRARMEMETARRASDLARMS 500

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L    +          +  LL+TKV  EEIAEIVS+ TGIPVS++++
Sbjct: 501 ELQYGRIPELEKQLARAGE------GGQGENRLLRTKVTEEEIAEIVSKWTGIPVSRMLE 554

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ + +RVVGQ+EA+ +VS+A+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 555 GERDKLLRMESEIERRVVGQNEAVRSVSDAVRRSRAGLSDPGRPIGSFLFLGPTGVGKTE 614

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+A +F+ EE+++RIDMSEF+E+HS++RLIGAPPGY+GYEEGGYLTE +RR+PYSL
Sbjct: 615 LCKALAAFLFDTEEAMVRIDMSEFMERHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSL 674

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I++   + +
Sbjct: 675 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSSIIQQRAGEAN 734

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K AVM EV+  FRPEFINR+D+I+VF  L    I +IA IQL+ L+ +L   +M L
Sbjct: 735 YAAMKEAVMEEVRHAFRPEFINRLDEIVVFHPLQPSQIRAIARIQLDFLQQRLADRDMRL 794

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +  +AL  +   GFD +YGAR
Sbjct: 795 TVDDSALDHLGAAGFDPVYGAR 816


>gi|430761748|ref|YP_007217605.1| ClpB protein [Thioalkalivibrio nitratireducens DSM 14787]
 gi|430011372|gb|AGA34124.1| ClpB protein [Thioalkalivibrio nitratireducens DSM 14787]
          Length = 857

 Score =  810 bits (2091), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/623 (61%), Positives = 515/623 (82%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  LLAG KYRG+FE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKDKRVLALDLGALLAGAKYRGDFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KSVLKDLAKEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHG+EITDPAIVAA++LS R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPTLEDTIAILRGLKERYEVHHGIEITDPAIVAAAQLSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEA+++I++EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRQLPDKAIDLVDEASSRIRMEIDSKPEEMDRLDRRLIQLKIEREAMKKETDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI +LE +Y++LE+IWK EK  +  + QIKE++E+ R+++  A R  D   +S
Sbjct: 440 RLDALEDEIERLEREYSDLEEIWKSEKAAVTGAAQIKEDLERARMELETARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ L++ ++ + +      +  LL+ KV  EE+AE+VSR TGIPVSK+++
Sbjct: 500 ELQYGRIPELQKALEQAAELETR------ETRLLRNKVTDEEVAEVVSRWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +E  + +RVVGQDEA+ AV+NAIRR+R+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKDKLLRMEEAVGQRVVGQDEAVRAVANAIRRARAGLSDPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+A +F+ E++++RIDMSEF+EKHS++R+IGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LTKALAAFLFDTEDAMVRIDMSEFMEKHSVARMIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD  GRT++FRNT+IVMTSNLGS  I+EM  G++
Sbjct: 674 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGHGRTVDFRNTVIVMTSNLGSQLIQEM-AGEE 732

Query: 554 EI--IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
               +K AVM  V  +FRPEFINR+DD++VF  L R+ I +I +IQL +L+ +L + ++ 
Sbjct: 733 HYAQMKAAVMEVVGSHFRPEFINRVDDVVVFHPLGREQIRAITDIQLRLLRQRLAERDIA 792

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
            ++S+AAL ++   GFD +YGAR
Sbjct: 793 FEVSEAALDRLGEAGFDPVYGAR 815


>gi|441504482|ref|ZP_20986476.1| ClpB protein [Photobacterium sp. AK15]
 gi|441427949|gb|ELR65417.1| ClpB protein [Photobacterium sp. AK15]
          Length = 857

 Score =  810 bits (2091), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/622 (61%), Positives = 509/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIVNGEVPEGLRHKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSQEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLKIE +A+ +E D++S K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKIEQQALVKESDDASHK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E++K E +YA LE++W  EK  +  +Q IK E+E+ R  +  A R  D   +S
Sbjct: 440 RLKDLSEELDKKEREYAELEEVWNAEKAALSGTQHIKTELEQARTDMEIARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q ++Q      + +LLK KV   EIAE++SR TGIPV+K+++
Sbjct: 500 ELQYGKIPELEKQLDLAAQAEMQ------EMSLLKNKVTDAEIAEVLSRQTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E  L KRV+GQDEA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLHMEEALHKRVIGQDEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKSLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++I+MTSNLGSD+I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVIIMTSNLGSDRIQEHFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM  V  +FRPEFINR+D+ +VF  L +++I +IANIQ+  L  +L + +  L
Sbjct: 734 YDGIKHTVMEVVGQHFRPEFINRVDETVVFHPLGQEHIKNIANIQIMRLVKRLEEKDYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++ ++AL+ IS  GFD +YGAR
Sbjct: 794 ELQESALELISQAGFDPVYGAR 815


>gi|431925903|ref|YP_007238937.1| ATP-dependent chaperone ClpB [Pseudomonas stutzeri RCH2]
 gi|431824190|gb|AGA85307.1| ATP-dependent chaperone ClpB [Pseudomonas stutzeri RCH2]
          Length = 854

 Score =  810 bits (2091), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/621 (61%), Positives = 509/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLALDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDLSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I KL  +YA+LE+IWK EK  ++ S QI+++IE+ + ++  A RK D   ++
Sbjct: 440 RLAKLEDDIAKLAREYADLEEIWKSEKAEVQGSAQIQQKIEQAKAELEAARRKGDLARMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLEMVDQ------HGKKENQLLRNKVTDEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E++L  RV+GQ EA+ AVSNA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEDMLHTRVIGQHEAVVAVSNAVRRSRAGLADPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L+DE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GD 
Sbjct: 674 VLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSTQIQEL-VGDP 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
              + AVM+ V  +FRPEFINRID+++VF  L R+ I  IA+IQL  L+ +L +  + L+
Sbjct: 733 GAQRAAVMDAVAHHFRPEFINRIDEVVVFDPLGREQIAGIADIQLGRLRKRLAERELSLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ A+ K+  +G+D +YGAR
Sbjct: 793 LSQEAMDKLIAVGYDPVYGAR 813


>gi|119476932|ref|ZP_01617213.1| ATPase with chaperone activity, ATP-binding subunit [marine gamma
           proteobacterium HTCC2143]
 gi|119449739|gb|EAW30976.1| ATPase with chaperone activity, ATP-binding subunit [marine gamma
           proteobacterium HTCC2143]
          Length = 860

 Score =  810 bits (2091), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/621 (61%), Positives = 513/621 (82%), Gaps = 7/621 (1%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  LLAG K+RGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKDKRVLSLDLGSLLAGAKFRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYR
Sbjct: 261 AVLNELSKQEGRIILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLNEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           QY+EKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YE+HHGV+ITD AI+AA++LS RY
Sbjct: 321 QYLEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEIHHGVDITDSAIIAAAKLSQRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DR +PDKAIDLIDEA ++I++EIDSKPE MD+LERRLIQLKIE EA+K++ D ++KK+
Sbjct: 381 ITDRQLPDKAIDLIDEAGSRIRMEIDSKPESMDRLERRLIQLKIEREAVKKDTDSAAKKQ 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L+++  +I K E +YA+LE++W  EK++++ SQQ K E+EK R+ +  A R  D   +S+
Sbjct: 441 LVILDNDILKSEKEYADLEEVWMAEKSILQGSQQTKSELEKARMDLEAAHRAGDLTRMSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG +  LE+ ++  SQ +        + TLL+ KV  EE+AE+VS+ TGIPVSK+++ 
Sbjct: 501 LQYGVIPGLEKTMETASQAETV------EMTLLRNKVTEEEVAEVVSKWTGIPVSKMLEG 554

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           ER+KLL +E  L KRV+GQ EA+ +VSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTEL
Sbjct: 555 ERDKLLRMEESLQKRVIGQSEAVISVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTEL 614

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L+  +F++E++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++
Sbjct: 615 CKALAMFLFDSEDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVL 674

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDK 553
           LLDE+EKA+SDVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+++ E+ + 
Sbjct: 675 LLDEVEKAHSDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIQQLSEEKNY 734

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K +VM  V  +FRPEFINRID+ +VF  L+++ I  IA IQ+++L+++L    + L+
Sbjct: 735 EAMKRSVMEVVGGHFRPEFINRIDETVVFHPLDQQQIRGIAAIQIDLLRSRLRDRELGLE 794

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S AA+ K++N+GFD +YGAR
Sbjct: 795 LSSAAIDKLANVGFDPVYGAR 815


>gi|261856613|ref|YP_003263896.1| ATP-dependent chaperone ClpB [Halothiobacillus neapolitanus c2]
 gi|261837082|gb|ACX96849.1| ATP-dependent chaperone ClpB [Halothiobacillus neapolitanus c2]
          Length = 860

 Score =  809 bits (2090), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 506/622 (81%), Gaps = 5/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+  LLAG K+RG+FE+RL
Sbjct: 201 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPENLKNKRVLSLDMGALLAGAKFRGDFEERL 260

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  +I+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 261 KGVLNDVAKQEGRVILFIDEIHTMVGAGKSDGAMDAGNMLKPALARGELHCIGATTLDEY 320

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPAIVAA+ LS+R
Sbjct: 321 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVEITDPAIVAAATLSHR 380

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y++DR +PDKAIDLIDEAA+++++EIDSKPE MD+LERRLIQLKIE  A+K+E DE+S K
Sbjct: 381 YVTDRQLPDKAIDLIDEAASRLRMEIDSKPEEMDRLERRLIQLKIEQVALKKEKDEASLK 440

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++++I++L  +Y+ LE+IWK EK +++ S ++KE+++  R+    A R  D   +S
Sbjct: 441 RLADLEEQIDRLGREYSELEEIWKAEKLMVEGSAKVKEQLDHARIDFETARRAGDLARMS 500

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L++    +           LL+ KVG EEIAE+V+R TGIPV+K+++
Sbjct: 501 ELQYGRIPELERQLQQAQSAE----QTETTPRLLRNKVGEEEIAEVVARATGIPVAKMLE 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +E  L  RVVGQDEA+ +V++AIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 557 GEKDKLLRMEEALATRVVGQDEAVKSVADAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ EES++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RRKPYS+
Sbjct: 617 LTKALANFLFDTEESMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGD 552
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I+EM E  D
Sbjct: 677 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHLIQEMAETND 736

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K AV+  V  +FRPEFINRID+++VF  L R+ I  I +IQ++ L+ +L + ++ +
Sbjct: 737 YDAMKTAVLEVVGGHFRPEFINRIDEVVVFHPLGREQIRQIVDIQIDFLRKRLAERDLQI 796

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +++  AL  +   GFD +YGAR
Sbjct: 797 ELTIQALDLLGEAGFDPVYGAR 818


>gi|255022127|ref|ZP_05294130.1| ClpB protein [Acidithiobacillus caldus ATCC 51756]
 gi|340782895|ref|YP_004749502.1| ClpB protein [Acidithiobacillus caldus SM-1]
 gi|254968391|gb|EET25950.1| ClpB protein [Acidithiobacillus caldus ATCC 51756]
 gi|340557046|gb|AEK58800.1| ClpB protein [Acidithiobacillus caldus SM-1]
          Length = 865

 Score =  809 bits (2090), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 519/622 (83%), Gaps = 3/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLRGKRLLGLDLGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  II+FIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KALLNDLAKAEGKIILFIDEIHTLVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQ++LV+EP +E+TI+ILRGL+++YE HHGV ITDPA+VAA++LS+R
Sbjct: 320 RKYIEKDAALERRFQRVLVDEPSVEDTIAILRGLKERYEAHHGVRITDPALVAAAQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDL+DEAA++IK+EIDSKPE +D+LERRLIQL IE  A+ +E DE+S+K
Sbjct: 380 YISDRNLPDKAIDLVDEAASRIKMEIDSKPEELDELERRLIQLNIEKVALAKEKDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I +L+ KY  LE+IWK EK  I+ + QI++E++++R++++ A R +D + ++
Sbjct: 440 RLENLESQIAELQRKYQELEEIWKSEKLAIEGTSQIQKELDRLRVELDNARRANDLERMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG++  LE  L+E  +++      A   TLL+T+V  EEIAE++SR TGIPVSK+++
Sbjct: 500 QIQYGQIPALEAKLREAEKQEADGQRKAP--TLLRTEVTEEEIAEVISRWTGIPVSKMLE 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L  RVVGQDEA++AV+NAIRRSR+GL+D +RP GSF+FLGPTGVGKTE
Sbjct: 558 GEKEKLLKMEERLRARVVGQDEAVTAVANAIRRSRAGLADPRRPIGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E+ ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LTKALAEFLFDSEDHMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK-GD 552
           ILLDE+EKA+ +VFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD+I+E  + GD
Sbjct: 678 ILLDEVEKAHPEVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDRIQEYGRLGD 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E ++ AVM  V+ +FRPEF+NRID++++F+ L+R+ + +IA IQ+  L+ +L + ++D+
Sbjct: 738 VEGMRGAVMEVVQGHFRPEFLNRIDELVIFQPLSRQQLRAIAEIQMGSLRARLRERDLDI 797

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +S AA+  ++  GFD +YGAR
Sbjct: 798 VLSDAAVNLLAETGFDPVYGAR 819


>gi|307543921|ref|YP_003896400.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Halomonas
           elongata DSM 2581]
 gi|307215945|emb|CBV41215.1| K03695 ATP-dependent Clp protease ATP-binding subunit ClpB
           [Halomonas elongata DSM 2581]
          Length = 859

 Score =  809 bits (2089), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/622 (60%), Positives = 516/622 (82%), Gaps = 5/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI++GEVP  L  K++L LD+  LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVDGEVPEGLKDKRVLSLDMGALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLKELAEEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LV+EP  E+T++ILRGL+++YEVHHGV+ITD AI+AA++LS R
Sbjct: 320 RQHIEKDAALERRFQKVLVDEPTEEDTVAILRGLKERYEVHHGVDITDGAIIAAAKLSTR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEA+++I++E+DSKPE MD+L+RRLIQLK+E E +K+E DE+S+K
Sbjct: 380 YITDRQLPDKAIDLIDEASSRIRMELDSKPEEMDRLDRRLIQLKMEREHLKKETDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++++I++LE +YA+L++IWK EK  I+ + Q K+E+++ R+ + +A R+ D   +S
Sbjct: 440 RLESLEEQISELEREYADLDEIWKAEKASIQGAAQFKDELDRARIDLEQARRQGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER + E S+++     + ++  LL++ V  EEIAE+VSR TGIPVSK+++
Sbjct: 500 ELQYGVIPELERKIAESSEEEA----DTSEHRLLRSNVTEEEIAEVVSRWTGIPVSKMLE 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQDEA++AVSNA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 556 GERDKLLRMEEALHERVIGQDEAVNAVSNAVRRSRAGLADPNRPNGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKSLAWFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGD 552
           +LLDE+EKA++DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGSD I+ M    D
Sbjct: 676 LLLDEVEKAHADVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSDIIQRMGSDED 735

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V  +FRPE INRID+++VF  L ++ I +IA+IQL  L+++L + ++  
Sbjct: 736 YTQMKSMVMEVVGNHFRPELINRIDEVVVFHALEQEQIRAIADIQLERLRDRLAEHDLSF 795

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S  A+ +++  GFD ++GAR
Sbjct: 796 EVSDEAMAQLAAAGFDPVFGAR 817


>gi|388546356|ref|ZP_10149632.1| chaperone [Pseudomonas sp. M47T1]
 gi|388275593|gb|EIK95179.1| chaperone [Pseudomonas sp. M47T1]
          Length = 854

 Score =  809 bits (2089), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/621 (62%), Positives = 510/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KGVLNDLSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKEDDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +EI +LE +YA+LE++W  EK  ++ S QI+++IE+ R ++  A R+ D   ++
Sbjct: 440 RLEKLTEEITRLEREYADLEEVWTSEKAEVQGSAQIQQKIEQSRQELEAARRRGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  +   LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLQMVDQ------HGKSDNQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+LL +RV+GQDEA+ AV+NA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GEREKLLKMESLLHQRVIGQDEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTDN+GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 VLLDEVEKAHPDVFNVLLQVLDDGRLTDNQGRTVDFRNTVIVMTSNLGSAQIQEL-TGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID++++F  L R  I  I  IQL  L+++L +  ++L 
Sbjct: 733 EAQRAAVMDAVSSHFRPEFINRIDEVVIFEALARDQIAGITQIQLGRLRSRLAERELNLT 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSDEALDKLIAVGYDPVYGAR 813


>gi|352080093|ref|ZP_08951162.1| ATP-dependent chaperone ClpB [Rhodanobacter sp. 2APBS1]
 gi|351684802|gb|EHA67871.1| ATP-dependent chaperone ClpB [Rhodanobacter sp. 2APBS1]
          Length = 863

 Score =  809 bits (2089), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/627 (60%), Positives = 508/627 (81%), Gaps = 12/627 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRII GEVP  L  +++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIIKGEVPEGLRDRRVLALDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLSDLSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS+R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D  SK+
Sbjct: 380 YIADRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDSESKQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I KLE ++++L +IWK EK  ++ + ++KE+IE+ R +++ A R+ D+  +S
Sbjct: 440 RLADLETDIGKLEREFSDLNEIWKSEKAALQGTTKVKEQIEQARQELDAAQRRQDYAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG+L +LE+ L      + Q       F L++T+V +EEIAE+VSR TGIPV+K+++
Sbjct: 500 EIQYGKLPELEKQLAAAQAAETQ------GFRLVQTRVTAEEIAEVVSRWTGIPVNKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL++E+ L +RVVGQDEA+ AVS+AIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLHMEDALHQRVVGQDEAVHAVSDAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+  ++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALAEFMFDTTDAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--G 551
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I++  +  G
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQMIQDAAESNG 733

Query: 552 DKE----IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLK 607
           D E     +K +V+  V+ +FRPEFINR+D+I+VFR L++  I +IA IQL  L+ +L +
Sbjct: 734 DAEEQYTQMKASVLGVVQAHFRPEFINRLDEIVVFRPLDKSQIRAIAKIQLEYLEKRLAE 793

Query: 608 MNMDLKISKAALKKISNIGFDLIYGAR 634
             + L +   AL  + N+GFD +YGAR
Sbjct: 794 RQLKLDVGDDALALLGNVGFDPVYGAR 820


>gi|381172820|ref|ZP_09881938.1| ATP-dependent chaperone ClpB [Xanthomonas citri pv.
           mangiferaeindicae LMG 941]
 gi|380686745|emb|CCG38425.1| ATP-dependent chaperone ClpB [Xanthomonas citri pv.
           mangiferaeindicae LMG 941]
          Length = 859

 Score =  809 bits (2089), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/627 (61%), Positives = 509/627 (81%), Gaps = 14/627 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S N+  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 258 KAVLSDLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS R
Sbjct: 318 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++
Sbjct: 378 YITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+KLE ++++L ++WK EK +++ + +IKE+IE  +L++  A R+ D+  +S
Sbjct: 438 RLADLESDIDKLEREFSDLNEVWKSEKAVLQGTTKIKEQIEHAKLELEAAQRRQDYAKMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +++YG L +LE        K + L N    + F L++ +V +EEIAE+VSR TGIPV+K+
Sbjct: 498 EIQYGVLPQLE--------KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKM 549

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ ER+KLL +E+ L  RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVGK
Sbjct: 550 LEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGK 609

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PY
Sbjct: 610 TELCKALADFLFDSTEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPY 669

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           SLILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+   
Sbjct: 670 SLILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGD 729

Query: 552 DKE----IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLK 607
           D       +K AVM  V+ +FRPEFINR+DDI+VF  L++  I SIA IQL  L+ +L +
Sbjct: 730 DSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAE 789

Query: 608 MNMDLKISKAALKKISNIGFDLIYGAR 634
             + L +  AAL+ + ++GFD +YGAR
Sbjct: 790 RGLKLDLDDAALEVLGSVGFDPVYGAR 816


>gi|451936301|ref|YP_007460155.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
           Kinetoplastibacterium oncopeltii TCC290E]
 gi|451777224|gb|AGF48199.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
           Kinetoplastibacterium oncopeltii TCC290E]
          Length = 861

 Score =  808 bits (2088), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/621 (62%), Positives = 508/621 (81%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIIN EVP+SL  K++L LD+A L+AG K+RGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIINREVPDSLRDKRVLSLDLASLIAGAKFRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+IS +   I+ FIDELHT++G GK EGSIDAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KTVLKDISVDSNSIL-FIDELHTIMGAGKAEGSIDAGNMLKPSLARGELHCIGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK++V+EPD+E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS R
Sbjct: 318 RKYIEKDAALERRFQKVIVDEPDVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSNR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEA A+I++EIDSKPE MDKLERR+IQLKIE EA+K+E DE SKK
Sbjct: 378 YITDRFLPDKAIDLIDEAGARIRMEIDSKPEAMDKLERRMIQLKIEREAVKKESDEVSKK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I+ E+ K++ +Y + EKIWK EK +++ ++ IKEEI+ ++ K+ +  R   +  ++
Sbjct: 438 RLYVIEDELKKIQEEYNSYEKIWKSEKNIVEGTKNIKEEIDGLKAKMAELQRNGQYDLLA 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+Y +L +LE  LK      I   ++  KF LL+T+VG+EEIAE+VS  TGIPVSK++Q
Sbjct: 498 ELQYSKLPELEEKLKSAENYSINQSSD-KKFKLLRTQVGAEEIAEVVSVATGIPVSKMMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++ + L  R++GQ EA+ AVS+AI R+R+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 557 GEREKLLHMNDFLNSRIIGQSEAVRAVSDAILRARAGLSDQSRPSGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++ + +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LAKALADFMFDSRDHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD+ GRT++FRNT+I+MTSNLGS+ I+ M     
Sbjct: 677 VLLDEVEKAHLDVFNVLLQVLDDGRLTDSHGRTVDFRNTVIIMTSNLGSNHIQSMIDSTY 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + I+  +M E+K+  RPEF+NRID+I+ F  L  + + SI  IQ++ LK++L + NM ++
Sbjct: 737 DEIRKVLMEELKLTLRPEFLNRIDEIVFFHSLKSEQMASIVKIQIDQLKDRLKQKNMHIE 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           IS  A+  ++  GFD+++GAR
Sbjct: 797 ISNDAVSMLAKNGFDIVFGAR 817


>gi|410862267|ref|YP_006977501.1| ClpB protein [Alteromonas macleodii AltDE1]
 gi|410819529|gb|AFV86146.1| ClpB protein [Alteromonas macleodii AltDE1]
          Length = 858

 Score =  808 bits (2088), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/663 (58%), Positives = 524/663 (79%), Gaps = 15/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+F+DELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKEEGRVILFVDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHSVDITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE MD+LERR+IQLK+E +A+ +E D++S K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRLQIDSKPEDMDRLERRIIQLKLEEQALAKETDDASHK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I+ E  + E KYA LEK+W  EK  ++ +Q IK E+E+ +L +  A R SD   +S
Sbjct: 440 RLEMIELEREQAETKYAELEKVWLDEKDAMQGTQTIKGELEQAKLDLEIARRASDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE  L++ ++      N   + TLLK KV   EIA+++SR TGIPV+++++
Sbjct: 500 ELQYGRIPELEAKLEQAAE------NETRETTLLKNKVTDVEIADVLSRWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E++L KRVVGQ+EA+ +VSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEDVLHKRVVGQEEAVQSVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ E+++IRIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAGFMFDTEDAMIRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+++MTSNLGSD I++     +
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVVIMTSNLGSDIIQDKHSESQ 733

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  VMN V  +FRPEFINR+DDI+VF  L ++ I SIA IQL  L+ +L      L
Sbjct: 734 YDEMKGMVMNVVGQHFRPEFINRVDDIVVFHPLGKEQIKSIAKIQLASLRARLADKGYKL 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
            +S AA+ K++  GFD ++GAR +   K+++     ++  ++P A+ +  G+LI +    
Sbjct: 794 TLSAAAMDKLAEAGFDPVFGARPL---KRAI-----QVQVENPLAHQLLAGELIPESTVR 845

Query: 673 LDT 675
           +D 
Sbjct: 846 IDA 848


>gi|418516808|ref|ZP_13082978.1| ATP-dependent Clp protease subunit [Xanthomonas axonopodis pv.
           malvacearum str. GSPB1386]
 gi|410706405|gb|EKQ64865.1| ATP-dependent Clp protease subunit [Xanthomonas axonopodis pv.
           malvacearum str. GSPB1386]
          Length = 861

 Score =  808 bits (2088), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/627 (61%), Positives = 508/627 (81%), Gaps = 14/627 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S N+  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLSDLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++
Sbjct: 380 YITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+KLE ++++L ++WK EK  ++ + +IKE+IE  +L++  A R+ D+  +S
Sbjct: 440 RLADLESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +++YG L +LE        K + L N    + F L++ +V +EEIAE+VSR TGIPV+K+
Sbjct: 500 EIQYGVLPQLE--------KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKM 551

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ ER+KLL +E+ L  RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVGK
Sbjct: 552 LEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGK 611

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PY
Sbjct: 612 TELCKALADFLFDSTEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPY 671

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           SLILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+   
Sbjct: 672 SLILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGD 731

Query: 552 DKE----IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLK 607
           D       +K AVM  V+ +FRPEFINR+DDI+VF  L++  I SIA IQL  L+ +L +
Sbjct: 732 DSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAE 791

Query: 608 MNMDLKISKAALKKISNIGFDLIYGAR 634
             + L +  AAL+ + ++GFD +YGAR
Sbjct: 792 RGLKLDLDDAALEVLGSVGFDPVYGAR 818


>gi|294666951|ref|ZP_06732180.1| ATP-dependent Clp protease subunit [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292603240|gb|EFF46662.1| ATP-dependent Clp protease subunit [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 859

 Score =  808 bits (2087), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/627 (61%), Positives = 508/627 (81%), Gaps = 14/627 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S N+  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 258 KAVLSDLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS R
Sbjct: 318 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++
Sbjct: 378 YITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+KLE ++++L ++WK EK  ++ + +IKE+IE  +L++  A R+ D+  +S
Sbjct: 438 RLADLESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +++YG L +LE        K + L N    + F L++ +V +EEIAE+VSR TGIPV+K+
Sbjct: 498 EIQYGVLPQLE--------KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKM 549

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ ER+KLL +E+ L  RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVGK
Sbjct: 550 LEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGK 609

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PY
Sbjct: 610 TELCKALADFLFDSTEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPY 669

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           SLILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+   
Sbjct: 670 SLILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGD 729

Query: 552 DKE----IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLK 607
           D       +K AVM  V+ +FRPEFINR+DDI+VF  L++  I SIA IQL  L+ +L +
Sbjct: 730 DSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAE 789

Query: 608 MNMDLKISKAALKKISNIGFDLIYGAR 634
             + L +  AAL+ + ++GFD +YGAR
Sbjct: 790 RGLKLDLDDAALEVLGSVGFDPVYGAR 816


>gi|294624966|ref|ZP_06703618.1| ATP-dependent Clp protease subunit [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292600729|gb|EFF44814.1| ATP-dependent Clp protease subunit [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 861

 Score =  808 bits (2087), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/627 (61%), Positives = 508/627 (81%), Gaps = 14/627 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S N+  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLSDLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++
Sbjct: 380 YITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+KLE ++++L ++WK EK  ++ + +IKE+IE  +L++  A R+ D+  +S
Sbjct: 440 RLADLESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +++YG L +LE        K + L N    + F L++ +V +EEIAE+VSR TGIPV+K+
Sbjct: 500 EIQYGVLPQLE--------KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKM 551

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ ER+KLL +E+ L  RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVGK
Sbjct: 552 LEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGK 611

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PY
Sbjct: 612 TELCKALADFLFDSTEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPY 671

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           SLILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+   
Sbjct: 672 SLILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGD 731

Query: 552 DKE----IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLK 607
           D       +K AVM  V+ +FRPEFINR+DDI+VF  L++  I SIA IQL  L+ +L +
Sbjct: 732 DSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAE 791

Query: 608 MNMDLKISKAALKKISNIGFDLIYGAR 634
             + L +  AAL+ + ++GFD +YGAR
Sbjct: 792 RGLKLDLDDAALEVLGSVGFDPVYGAR 818


>gi|121999011|ref|YP_001003798.1| ATPase [Halorhodospira halophila SL1]
 gi|121590416|gb|ABM62996.1| ATPase AAA-2 domain protein [Halorhodospira halophila SL1]
          Length = 870

 Score =  808 bits (2087), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/624 (62%), Positives = 509/624 (81%), Gaps = 9/624 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPG GKTAIVEGLAQRI+N EVP  L +K++L LD+  LLAG KYRG+FE+RL
Sbjct: 201 NNPVLIGEPGTGKTAIVEGLAQRIVNAEVPEGLKNKRVLSLDLGALLAGAKYRGDFEERL 260

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+   +  II+FIDELHT++G GK EG++DAGNMLKP L+RGELHCIGATTLNEY
Sbjct: 261 KALLKELGQQEGQIILFIDELHTIVGAGKAEGAMDAGNMLKPALARGELHCIGATTLNEY 320

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+ IEKDAA ERRFQ +LV+EP +E+T++ILRGL+++YEVHHGVEITDPAIV+A+ LS+R
Sbjct: 321 RENIEKDAALERRFQTVLVDEPSVEDTVAILRGLKERYEVHHGVEITDPAIVSAATLSHR 380

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE MD+LERRLIQLKIE EA+K E D++S+K
Sbjct: 381 YITDRNLPDKAIDLVDEAASRIRMEIDSKPESMDRLERRLIQLKIEREALKNENDDASRK 440

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI++LE +Y +LE+IW  EK  ++ +Q IKEE+E+ R ++  A R  D Q +S
Sbjct: 441 RLATLEDEISELEQEYQSLEEIWNSEKAAVEGTQSIKEELERARQEVETARRAGDLQRMS 500

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L   +Q D+          LL+ +V  EE+AE+VS+ TGIPVSK+++
Sbjct: 501 ELQYGRIPELERQLDMAAQADM------YDMKLLRNRVTEEEVAEVVSKWTGIPVSKMLE 554

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RVVGQDEAI AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 555 GERDKLLRMEEALHERVVGQDEAIGAVANAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 614

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ +E+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 615 LCKALAEFLFDTQEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEHVRRKPYSV 674

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFN+LLQ+LDDGRLTD+ GRT++FRNT+IVMTSNLGS+ I+ M   ++
Sbjct: 675 ILLDEVEKAHADVFNVLLQVLDDGRLTDSHGRTVDFRNTVIVMTSNLGSEVIQTMAGEEE 734

Query: 554 EI---IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNM 610
           E    +K +VM+ V   FRPEFINRID+++VFR L+R+ I +I +IQ+  L  +L + +M
Sbjct: 735 ESYQRMKSSVMDIVGTQFRPEFINRIDEVVVFRPLSREQIRAITSIQVRYLSERLAERDM 794

Query: 611 DLKISKAALKKISNIGFDLIYGAR 634
            L++S+ AL +I   GFD +YGAR
Sbjct: 795 ALELSEVALDRIGEAGFDPVYGAR 818


>gi|425901645|ref|ZP_18878236.1| ATP-dependent chaperone protein ClpB [Pseudomonas chlororaphis
           subsp. aureofaciens 30-84]
 gi|397893034|gb|EJL09510.1| ATP-dependent chaperone protein ClpB [Pseudomonas chlororaphis
           subsp. aureofaciens 30-84]
          Length = 854

 Score =  808 bits (2087), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/621 (62%), Positives = 511/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKEDDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI +LE +YA+LE++W  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEITRLEREYADLEEVWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  ++  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGQSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+LL +RV+GQDEA+ AV+NA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLLKMESLLHQRVIGQDEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID++++F  L R  I  I  IQL  L+++L +  + L+
Sbjct: 733 EAQRAAVMDAVSTHFRPEFINRIDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELKLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSGEALDKLIAVGYDPVYGAR 813


>gi|260771107|ref|ZP_05880034.1| ClpB protein [Vibrio furnissii CIP 102972]
 gi|260613704|gb|EEX38896.1| ClpB protein [Vibrio furnissii CIP 102972]
          Length = 857

 Score =  808 bits (2087), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/663 (57%), Positives = 523/663 (78%), Gaps = 15/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I++++DSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRMQMDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++W  EK  +  +Q IK E+E+ RL +  A R  D   +S
Sbjct: 440 RLNILNEELQEKERDYAELEEVWNAEKAALSGTQHIKSELEQARLDLEVARRAGDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPV+K+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E++L +RV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEDVLHQRVIGQVEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFASLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM  V  +FRPEF+NR+D+ +VF  L R++I SIA+IQL  L+ +LL+ + +L
Sbjct: 734 YQGIKEQVMEVVSKHFRPEFLNRVDETVVFHPLGREHIKSIASIQLERLRKRLLEKDFEL 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
           ++S  AL  I+ +GFD +YGAR +   K+++     + + ++P A  I  G  +   P  
Sbjct: 794 QVSDEALDLIAQVGFDPVYGARPL---KRAI-----QQNVENPLAKSILAGTFLPGTPIK 845

Query: 673 LDT 675
           LD 
Sbjct: 846 LDV 848


>gi|346725988|ref|YP_004852657.1| ATP-dependent Clp protease subunit [Xanthomonas axonopodis pv.
           citrumelo F1]
 gi|346650735|gb|AEO43359.1| ATP-dependent Clp protease subunit [Xanthomonas axonopodis pv.
           citrumelo F1]
          Length = 861

 Score =  808 bits (2086), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/627 (61%), Positives = 507/627 (80%), Gaps = 14/627 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S N+  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLSDLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++
Sbjct: 380 YITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+KLE ++++L ++WK EK  ++ + +IKE+IE  +L++  A R+ D+  +S
Sbjct: 440 RLADLESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +++YG L +LE        K + L N    + F L++ +V +E IAE+VSR TGIPV+K+
Sbjct: 500 EIQYGVLPQLE--------KQMLLANEVEHHDFKLVQDRVTAEGIAEVVSRWTGIPVNKM 551

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ ER+KLL +E+ L  RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVGK
Sbjct: 552 LEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGK 611

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PY
Sbjct: 612 TELCKALADFLFDSTEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPY 671

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           SLILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+   
Sbjct: 672 SLILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGD 731

Query: 552 DKE----IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLK 607
           D       +K AVM  V+ +FRPEFINR+DDI+VF  L++  I SIA IQL  L+ +L +
Sbjct: 732 DSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAE 791

Query: 608 MNMDLKISKAALKKISNIGFDLIYGAR 634
             + L +  AAL+ + N+GFD +YGAR
Sbjct: 792 RGLKLDLDDAALEVLGNVGFDPVYGAR 818


>gi|350563575|ref|ZP_08932396.1| ATP-dependent chaperone ClpB [Thioalkalimicrobium aerophilum AL3]
 gi|349778710|gb|EGZ33061.1| ATP-dependent chaperone ClpB [Thioalkalimicrobium aerophilum AL3]
          Length = 855

 Score =  808 bits (2086), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/622 (61%), Positives = 504/622 (81%), Gaps = 2/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  LLAG KYRGEFE+RL
Sbjct: 194 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRHKRVLSLDLGSLLAGAKYRGEFEERL 253

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK++S N+  +I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTLNEY
Sbjct: 254 KAVLKDLSKNEGQVILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLNEY 313

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R  IEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV ITDPAIVAA+ LS R
Sbjct: 314 RDNIEKDAALERRFQKVLVDEPTEEDTIAILRGLKERYEVHHGVAITDPAIVAAARLSQR 373

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE MDKL+RRLIQLK+E  A+K+E D++SKK
Sbjct: 374 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEEMDKLDRRLIQLKMEQVALKKEKDDASKK 433

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++K +I  LE +Y++ E++WK +K  ++ +QQ KE ++K R ++  A R+ +   +S
Sbjct: 434 RLAILKDQIKDLEKQYSDFEEVWKKDKAALQGAQQYKEALDKARTEMEAARREGNLGRMS 493

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE  +K   + +I    N  +  LL+ KV  EEIAE+VSR TGIPVS++++
Sbjct: 494 ELQYGVIPDLEAKIKAADELEI-TDENKGEMHLLRNKVSEEEIAEVVSRWTGIPVSRMME 552

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L  +VVGQDEA+ AVS+AIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 553 GERDKLLRMEDSLSAKVVGQDEAVKAVSDAIRRSRAGLSDPNKPNGSFLFLGPTGVGKTE 612

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K+L+  +F+++++I+R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+
Sbjct: 613 LTKSLADFLFDSQDAIVRLDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEAVRRKPYSV 672

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I+E+  +G+
Sbjct: 673 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQIIQELAGEGN 732

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K AVM  V  +FRPEF+NRIDDI+VF  L +  I +I +IQL  L+ +L  +++ +
Sbjct: 733 YDAMKSAVMEVVGGHFRPEFVNRIDDIVVFHPLGKGQIRAITDIQLESLRKRLADIDLKI 792

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +S  AL  I   GFD +YGAR
Sbjct: 793 DVSIPALDVIGEAGFDPVYGAR 814


>gi|451812049|ref|YP_007448503.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
           Kinetoplastibacterium galatii TCC219]
 gi|451777951|gb|AGF48899.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
           Kinetoplastibacterium galatii TCC219]
          Length = 861

 Score =  808 bits (2086), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/621 (61%), Positives = 511/621 (82%), Gaps = 2/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP++L  K++L LD+A L+AG K+RGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPDNLRDKRVLSLDLASLVAGAKFRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+IS +   I+ FIDELHT++G GK EGSIDAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 259 KAVLKDISVDCSSIL-FIDELHTIMGAGKAEGSIDAGNMLKPALARGELHCIGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK++V+EP++E TI+ILRGLQ++YE+HHGVEITDPAIVAA+ELS R
Sbjct: 318 RKYIEKDAALERRFQKVIVDEPNVESTIAILRGLQERYEIHHGVEITDPAIVAAAELSNR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DRF+PDKAIDLIDEA A+I++EIDSKPE MDKLERR+IQLKIE EA+K+E D+ SK+
Sbjct: 378 YITDRFLPDKAIDLIDEAGARIRMEIDSKPEAMDKLERRIIQLKIEREAVKKESDDVSKR 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I+ E+ K++ +Y + EKIWK EK +++ ++ IKEEI+ ++ K+ +  R   +  ++
Sbjct: 438 RLCVIEDELKKIQQEYNDYEKIWKSEKNVVEGTKNIKEEIDSLKAKMAEFQRNGQYDRLA 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+Y +L +LE  LK      I   ++  KF LL+T+VG+EEIAE+VSR TGIPVSK++Q
Sbjct: 498 ELQYSKLPELEEKLKSAESYSINQSSD-KKFKLLRTQVGAEEIAEVVSRATGIPVSKMMQ 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++ + L  +++GQ EA++AVS+AI R+R+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 557 GEREKLLHMSDFLNSKIIGQSEAVNAVSDAILRARAGLSDQSRPSGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++ + +IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LAKALADFMFDSRDHMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD+ GRT++FRNTII+MTSNLGS+ I+ M     
Sbjct: 677 VLLDEVEKAHPDVFNVLLQVLDDGRLTDSHGRTVDFRNTIIIMTSNLGSNHIQSMMNDTY 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + I+  VM E+K   RPEF+NRID+I+ F  L  + + SI  IQ++ LK++L + +M + 
Sbjct: 737 DEIRKVVMEELKATLRPEFLNRIDEIVFFHSLKLEQMSSIVKIQIDQLKDRLKQKSMRID 796

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +++ A+  ++N GFD+++GAR
Sbjct: 797 LTENAISSLANKGFDIVFGAR 817


>gi|325924771|ref|ZP_08186207.1| ATP-dependent chaperone ClpB [Xanthomonas perforans 91-118]
 gi|325544787|gb|EGD16134.1| ATP-dependent chaperone ClpB [Xanthomonas perforans 91-118]
          Length = 861

 Score =  808 bits (2086), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/627 (61%), Positives = 507/627 (80%), Gaps = 14/627 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S N+  II+FIDELH M+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLSDLSKNEGQIILFIDELHIMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++
Sbjct: 380 YITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+KLE ++++L ++WK EK  ++ + +IKE+IE  +L++  A R+ D+  +S
Sbjct: 440 RLADLESDIDKLEREFSDLNEVWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +++YG L +LE        K + L N    + F L++ +V +EEIAE+VSR TGIPV+K+
Sbjct: 500 EIQYGVLPQLE--------KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKM 551

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ ER+KLL +E+ L  RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVGK
Sbjct: 552 LEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGK 611

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PY
Sbjct: 612 TELCKALADFLFDSTEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPY 671

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           SLILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+   
Sbjct: 672 SLILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGD 731

Query: 552 DKE----IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLK 607
           D       +K AVM  V+ +FRPEFINR+DDI+VF  L++  I SIA IQL  L+ +L +
Sbjct: 732 DSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAE 791

Query: 608 MNMDLKISKAALKKISNIGFDLIYGAR 634
             + L +  AAL+ + N+GFD +YGAR
Sbjct: 792 RGLKLDLDDAALEVLGNVGFDPVYGAR 818


>gi|431800678|ref|YP_007227581.1| ATPase [Pseudomonas putida HB3267]
 gi|430791443|gb|AGA71638.1| ATPase [Pseudomonas putida HB3267]
          Length = 854

 Score =  807 bits (2085), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/621 (62%), Positives = 511/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KGLLNELSKQEGQIILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQFIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +EI++LE +YA+LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLTEEIDRLEREYADLEEIWASEKAEVQGSAQIQQKIEQARQELETARRKGDLSRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPV+K+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL +RV+GQ+EA++AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLKMEELLHQRVIGQNEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 VLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID+++VF  L R+ I  I  IQL  L+++LL+  + L 
Sbjct: 733 EAQRAAVMDAVGSHFRPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLS 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLIAVGYDPVYGAR 813


>gi|399006617|ref|ZP_10709140.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM17]
 gi|398121933|gb|EJM11544.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM17]
          Length = 854

 Score =  807 bits (2085), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/621 (62%), Positives = 510/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKEDDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI +LE +YA+LE++W  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEITRLEREYADLEEVWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  ++  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGQSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+LL +RV+GQDEA+ AV+NA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLLKMESLLHQRVIGQDEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID++++F  L R  I  I  IQL  L+ +L +  + L+
Sbjct: 733 EAQRAAVMDAVSTHFRPEFINRIDEVVIFEPLARDQIAGITEIQLGRLRGRLAERELKLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSGEALDKLIAVGYDPVYGAR 813


>gi|350422236|ref|XP_003493100.1| PREDICTED: chaperone protein ClpB-like [Bombus impatiens]
          Length = 856

 Score =  807 bits (2085), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/621 (60%), Positives = 505/621 (81%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNSEVPEGLRNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLKDLAKQEGRVILFIDELHTMVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++++DSKPE +D+L+RR+IQLK+E +A+K+E D++SKK
Sbjct: 380 YISDRMLPDKAIDLIDEAASSIRMQMDSKPESLDRLDRRIIQLKLEQQALKKETDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E +YA+LE+ WK EK  +  +Q IKE++EK R ++ +A R  D   +S
Sbjct: 440 RLEMLSEELTEKEKEYASLEEEWKAEKAAVSGTQTIKEKLEKARTELEQARRAGDLNKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L + +Q +           LL+ KV + EIAE++S++TGIPVS++++
Sbjct: 500 ELQYGRIPDLEKQLAQATQSE------GKTMKLLRNKVTAHEIAEVLSKSTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL++E  L +RV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEKEKLLHMEQALHQRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKAN +VFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGS+ I+  +    
Sbjct: 674 ILLDEVEKANPEVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSELIQGHDNLSY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K  VM  V  +FRPEFINRID+ +VF  L R+NI +IA IQL  ++N+L +      
Sbjct: 734 DEMKALVMTVVTQHFRPEFINRIDETVVFHPLGRENIKAIAKIQLARVENRLAEHGYQFT 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           IS AAL +++ +GFD IYGAR
Sbjct: 794 ISDAALSQLAEVGFDPIYGAR 814


>gi|344340643|ref|ZP_08771567.1| ATP-dependent chaperone ClpB [Thiocapsa marina 5811]
 gi|343799324|gb|EGV17274.1| ATP-dependent chaperone ClpB [Thiocapsa marina 5811]
          Length = 864

 Score =  807 bits (2085), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/622 (61%), Positives = 504/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+A L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRLLSLDMAALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +I   + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDIGRQEGNIILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKDAA ERRFQK+LV+EP++E+TI+ILRGL+++YEVHH VEITDPAIVAA+ LS+R
Sbjct: 320 RKYVEKDAALERRFQKVLVDEPNVEDTIAILRGLKERYEVHHAVEITDPAIVAAAVLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA++I++EIDS PE MD+L RRLIQLKIE  A+++E DE+SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAASQIRMEIDSMPEEMDRLNRRLIQLKIEQVALRKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I + E ++++L++IWK EK  ++ +  IKE +++ R+++  A R  D   +S
Sbjct: 440 RLTDLESQIERAEREFSDLDEIWKSEKAAVQGTAHIKEALDRARVEMETARRAGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   S  D +   N     LL+ KV  EEIAEIVS+ TGIPVS++++
Sbjct: 500 ELQYGRIPELEKQL--ASAADAEQGEN----RLLRNKVTEEEIAEIVSKWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  + KRVVGQ EA+ AVS+AIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEQEIEKRVVGQAEAVRAVSDAIRRSRAGLSDPGRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+A +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RR+PYSL
Sbjct: 614 LCKALAAFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRN +IVMTSNLGSD I+++  + +
Sbjct: 674 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNAVIVMTSNLGSDVIQQVAGEAN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K AVM  V++ FRPEFINR+D+I+VF  L    I +IA IQ++ L+ +L   +M L
Sbjct: 734 YAEMKDAVMEIVRVAFRPEFINRLDEIVVFHPLQPAQIRAIARIQIDYLRKRLADRDMAL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S AAL  +   GFD +YGAR
Sbjct: 794 EVSDAALDHLGEAGFDPVYGAR 815


>gi|350560805|ref|ZP_08929645.1| ATP-dependent chaperone ClpB [Thioalkalivibrio thiocyanoxidans ARh
           4]
 gi|349783073|gb|EGZ37356.1| ATP-dependent chaperone ClpB [Thioalkalivibrio thiocyanoxidans ARh
           4]
          Length = 857

 Score =  807 bits (2084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/623 (61%), Positives = 516/623 (82%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  LLAG KYRG+FE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKDKRVLALDLGALLAGAKYRGDFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KSVLKDLAKEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHG+EITDPAIVAA++LS R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPTLEDTIAILRGLKERYEVHHGIEITDPAIVAAAQLSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEA+++I++EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+S+K
Sbjct: 380 YITDRQLPDKAIDLVDEASSRIRMEIDSKPEEMDRLDRRLIQLKIEREAMKKETDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI +LE +Y++LE+IWK EK  +  + QIKE++E+ R+++  A R  D   +S
Sbjct: 440 RLDALEDEIERLEREYSDLEEIWKSEKAAVTGAAQIKEDLERARMELETARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ L++ ++ + +      +  LL+ KV  EE+AE+VSR TGIPVSK+++
Sbjct: 500 ELQYGRIPELQKGLEQAAELETR------ETRLLRNKVTDEEVAEVVSRWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +E  + +RVVGQ+EA+ AV+NAIRR+R+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKDKLLRMEEAIGQRVVGQEEAMRAVANAIRRARAGLSDPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+A +F+ E++++RIDMSEF+EKHS++R+IGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LTKALAAFLFDTEDAMVRIDMSEFMEKHSVARMIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD  GRT++FRNT+IVMTSNLGS  I+EM  G++
Sbjct: 674 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGHGRTVDFRNTVIVMTSNLGSQLIQEM-AGEE 732

Query: 554 --EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             + +K AVM  V  +FRPEFINRIDD++VF  L R+ I +I +IQL +L+ +L + ++ 
Sbjct: 733 HYQQMKAAVMEVVGSHFRPEFINRIDDVVVFHPLGREQIRAITDIQLRLLRQRLAERDIA 792

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
            ++S+AAL ++   GFD +YGAR
Sbjct: 793 FEVSEAALDRLGEAGFDPVYGAR 815


>gi|325921790|ref|ZP_08183609.1| ATP-dependent chaperone ClpB [Xanthomonas gardneri ATCC 19865]
 gi|325547722|gb|EGD18757.1| ATP-dependent chaperone ClpB [Xanthomonas gardneri ATCC 19865]
          Length = 802

 Score =  807 bits (2084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/628 (61%), Positives = 510/628 (81%), Gaps = 16/628 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 141 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 200

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S N+  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 201 KAVLSDLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 260

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS R
Sbjct: 261 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 320

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++
Sbjct: 321 YITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQ 380

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+KLE ++ +L ++WK EK  ++ + ++KE+IE  +L++  A R+ D+  +S
Sbjct: 381 RLADLETDIDKLEREFYDLNELWKSEKAALQGTTKVKEQIEHAKLELEAAQRRQDYAKMS 440

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +++YG L +LE        K + L N    + F L++ +V +EEIAE+VSR TGIPV+K+
Sbjct: 441 EIQYGVLPQLE--------KQMALANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKM 492

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ ER+KLL +E+ L  RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVGK
Sbjct: 493 LEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGK 552

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++ E++IRIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRR+PY
Sbjct: 553 TELCKALADFLFDSTEAMIRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRRPY 612

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           SLILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+  G
Sbjct: 613 SLILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQEL-SG 671

Query: 552 DKEI-----IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLL 606
           D        +K AVM  V+ +FRPEFINR+DDI+VF  L++  I SIA IQL+ L+ +L 
Sbjct: 672 DGSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLHGLEKRLS 731

Query: 607 KMNMDLKISKAALKKISNIGFDLIYGAR 634
           +  + L +  AAL+ + N+GFD +YGAR
Sbjct: 732 ERGLKLDLDDAALELLGNVGFDPVYGAR 759


>gi|315635103|ref|ZP_07890381.1| chaperone protein ClpB [Aggregatibacter segnis ATCC 33393]
 gi|315476065|gb|EFU66819.1| chaperone protein ClpB [Aggregatibacter segnis ATCC 33393]
          Length = 856

 Score =  807 bits (2084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/661 (58%), Positives = 523/661 (79%), Gaps = 14/661 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLKELAQEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+++E D++S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+++ E +YA LE++WK EK  +  +Q IK E+E  R ++ +A R  D   +S
Sbjct: 440 RLEMLEKELSEKEREYAELEEVWKSEKAALSGTQHIKAELENARTQMEQARRAGDLSKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L      +        + +LL+ +V  EEIAE++SR TGIPVSK+++
Sbjct: 500 ELQYGKIPELEKQLAAAEGAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEELHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  ++   
Sbjct: 674 ILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNQEESY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K  VM+ V  +FRPEFINRID+ +VF  LN+ NI +IA IQL  L N++      L 
Sbjct: 734 DDMKTLVMSVVSQHFRPEFINRIDETVVFHPLNKDNIRAIAEIQLKRLINRMESRGYVLH 793

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
            + A L  IS IG+D IYGAR +   K+++   +     ++P A  I  G L+ + P S+
Sbjct: 794 FTDATLNFISEIGYDPIYGARPL---KRAIQQEI-----ENPLAQQILSGSLLPEKPISV 845

Query: 674 D 674
           D
Sbjct: 846 D 846


>gi|424790554|ref|ZP_18217088.1| ATP-dependent Clp protease [Xanthomonas translucens pv. graminis
           ART-Xtg29]
 gi|422797974|gb|EKU26148.1| ATP-dependent Clp protease [Xanthomonas translucens pv. graminis
           ART-Xtg29]
          Length = 861

 Score =  807 bits (2084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/626 (60%), Positives = 509/626 (81%), Gaps = 12/626 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLRGRRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLSKTEGQVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++
Sbjct: 380 YIADRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+KL+ ++++L+++W+ EK  ++ + +IKE+IE+ R+++  A R+ D+  +S
Sbjct: 440 RLADLESDIDKLQREFSDLDEVWRSEKATLQGATRIKEQIEQARVELEAAQRRQDYAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG L  LE+ L      +       + F L++ +V +EEIAE+VSR TGIPV+++++
Sbjct: 500 EIQYGLLPNLEKQLAAAGDAE------HHDFKLVQDRVTAEEIAEVVSRWTGIPVNRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RVVGQ EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEDELHRRVVGQQEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL
Sbjct: 614 LCKALAEFLFDSSEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+  GD 
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQEL-SGDG 732

Query: 554 EI-----IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKM 608
                  +K AVM  V+ +FRPEFINR+DDI+VF  L++  I SIA IQL  L  +L + 
Sbjct: 733 SAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLGGLDKRLAER 792

Query: 609 NMDLKISKAALKKISNIGFDLIYGAR 634
            + +++S  AL+ + N+GFD +YGAR
Sbjct: 793 GLKIELSDRALELLGNVGFDPVYGAR 818


>gi|163802431|ref|ZP_02196324.1| ClpB protein [Vibrio sp. AND4]
 gi|159173732|gb|EDP58547.1| ClpB protein [Vibrio sp. AND4]
          Length = 860

 Score =  807 bits (2084), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/622 (60%), Positives = 510/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E D++S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNENDDASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+N+ E +YA LE++W  EK  +  +Q IK E+E+ R+ ++ A R  D   +S
Sbjct: 440 RLDVLNEELNEKEREYAELEEVWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL++E++L KRV+GQ EA+  VSNAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLHMEDVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFATLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L  +L +    L
Sbjct: 734 YQGIKNEVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLEHLAKRLEEKGYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S+ AL+ IS +GFD +YGAR
Sbjct: 794 EVSEKALELISQVGFDPVYGAR 815


>gi|358448455|ref|ZP_09158958.1| ATPase [Marinobacter manganoxydans MnI7-9]
 gi|357227243|gb|EHJ05705.1| ATPase [Marinobacter manganoxydans MnI7-9]
          Length = 858

 Score =  806 bits (2083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/623 (60%), Positives = 504/623 (80%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+ L  KK+L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKKVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKQEGQIILFIDEIHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+ IEKDAA ERRFQK+LV EP  E+TI+ILRGL+++YEVHHGVE+TD AI+AA++LS+R
Sbjct: 320 RENIEKDAALERRFQKVLVSEPSEEDTIAILRGLKERYEVHHGVEVTDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++E+DSKPE +D+LERRLIQLKIE EA+K+E D +SKK
Sbjct: 380 YIADRQLPDKAIDLVDEAASQIRMEMDSKPEALDRLERRLIQLKIEREALKKETDAASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +   I  +E +YA+LE++W  EK  +  SQ+IK  +E+ R+ +  A R  D   +S
Sbjct: 440 RLSELSDVITGVEREYADLEEVWNTEKAALHGSQKIKSRLEQARIDLENARRAGDLGKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LER L   SQ ++       +  LL+ +V  EEIAEIVS+ TGIPVSK+++
Sbjct: 500 ELQYGQIPELERQLDMASQAEMM------EMKLLRNRVTDEEIAEIVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KL+ +E  L  RV+GQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLMRMEEALHGRVIGQDEAVEAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGSD I++ + G++
Sbjct: 674 LLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSDIIQQ-KAGEE 732

Query: 554 --EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E++K AVM  V  +FRPEFINR+D+++VF  L    I  IA IQ+  L  +L + +M 
Sbjct: 733 SYEVMKNAVMEVVGTHFRPEFINRVDEVVVFHPLAESQIQGIARIQIESLSKRLKEQDMK 792

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L++  AA++ ++ +G+D +YGAR
Sbjct: 793 LELDDAAMELLAEVGYDPVYGAR 815


>gi|392953749|ref|ZP_10319303.1| ATP-dependent chaperone ClpB [Hydrocarboniphaga effusa AP103]
 gi|391859264|gb|EIT69793.1| ATP-dependent chaperone ClpB [Hydrocarboniphaga effusa AP103]
          Length = 863

 Score =  806 bits (2083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/625 (61%), Positives = 502/625 (80%), Gaps = 10/625 (1%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NP LIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L LD+  L+AG K+RGEFE+RLK
Sbjct: 201 NPALIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRLLSLDLGSLIAGAKFRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L ++S  +  +I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR
Sbjct: 261 NVLGDLSKAEGGVILFIDEIHTLVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           +YIEKDAA ERRFQK+LV EP +E++I+ILRGL+ +YE+HHGV+ITD AIVAA++LS+RY
Sbjct: 321 KYIEKDAALERRFQKVLVGEPSVEDSIAILRGLKARYELHHGVDITDGAIVAAAKLSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DR +PDKAIDLIDEAA++I+IE DSKPE MD+LERRLIQLKIE EA+K+E DE +K+ 
Sbjct: 381 ITDRNLPDKAIDLIDEAASRIRIEKDSKPEAMDRLERRLIQLKIEREALKKEKDEGAKRS 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L  ++++I KLE +YA+LE+IWK E   +  S  IKEEIE+VRL +  A R  D   +++
Sbjct: 441 LTALEEDIVKLEREYADLEEIWKAEMATVSGSAHIKEEIERVRLDMETARRAGDLSRMAE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG+L +LER L   S +  Q      K TL++  V  EEIAE+V+R TGIPV+K+++ 
Sbjct: 501 LQYGKLPELERRLAAASTEQKQ-----TKATLVRNNVTEEEIAEVVARWTGIPVAKLMEG 555

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           ER+KLL +E  L +RVVGQ+EA++AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTEL
Sbjct: 556 ERDKLLRMEEALHQRVVGQNEAVTAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTEL 615

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L++ +F+ EE+++RIDMSEF+E+HS++RLIGAPPGY+G+EEGGYLTE VRR+PYS++
Sbjct: 616 CKALASFLFDTEEAMVRIDMSEFMERHSVARLIGAPPGYVGFEEGGYLTEAVRRRPYSVV 675

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-----E 549
           LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRN +IVMTSNLGS+ I++M      
Sbjct: 676 LLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNAVIVMTSNLGSNLIQDMMSTQSS 735

Query: 550 KGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
             D   I+ AVM  V  +FRPEFINRID+ +VF  L  + I SIA +Q   +  +L + N
Sbjct: 736 SNDYAAIREAVMTVVGQHFRPEFINRIDESVVFHPLGSQQIRSIAKVQSQNVVKRLAERN 795

Query: 610 MDLKISKAALKKISNIGFDLIYGAR 634
           + ++ S AAL KI+  G+D +YGAR
Sbjct: 796 IAIEFSDAALDKIAEAGYDPVYGAR 820


>gi|269962555|ref|ZP_06176903.1| clpB protein [Vibrio harveyi 1DA3]
 gi|424047832|ref|ZP_17785388.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HENC-03]
 gi|269832750|gb|EEZ86861.1| clpB protein [Vibrio harveyi 1DA3]
 gi|408883142|gb|EKM21929.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HENC-03]
          Length = 857

 Score =  806 bits (2083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/622 (60%), Positives = 508/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+N+ E +YA LE++W  EK  +  +Q IK E+E+ R+ ++ A R  D   +S
Sbjct: 440 RLDVLNDELNEKEREYAELEEVWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  VSNAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEEVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFATLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL+ L  +L +    L
Sbjct: 734 YQGIKNEVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLDRLAKRLEEKGYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S+ AL  I+ +GFD +YGAR
Sbjct: 794 EVSEKALDLIAQVGFDPVYGAR 815


>gi|285017507|ref|YP_003375218.1| ATP-dependent clp protease subunit protein [Xanthomonas albilineans
           GPE PC73]
 gi|283472725|emb|CBA15230.1| putative atp-dependent clp protease subunit protein [Xanthomonas
           albilineans GPE PC73]
          Length = 861

 Score =  806 bits (2083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/625 (60%), Positives = 512/625 (81%), Gaps = 10/625 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S N+  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++
Sbjct: 380 YITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+KLE ++ +L+++WK EK  ++ + +IKE+IE+ R+++  A R+ D+  +S
Sbjct: 440 RLSDLEADIDKLEREFYDLDEVWKSEKAALQGATKIKEQIEQARVELEAAQRRQDYAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG L  LE+ L   ++ +       ++F L++ +V +EEIAE+VSR TGIPV+K+++
Sbjct: 500 EIQYGLLPNLEKQLAAANEAE------QHEFKLVQDRVTAEEIAEVVSRWTGIPVNKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RVVGQ EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEDELHQRVVGQHEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++ +++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL
Sbjct: 614 LCKALAEFLFDSSDAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTESVRRRPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+   D 
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDDS 733

Query: 554 E----IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
                 +K AVM  V+ +FRPEFINR+DDI+VF  L++  I +IA IQL+ L+ +L +  
Sbjct: 734 AEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKAIARIQLHGLEKRLAERG 793

Query: 610 MDLKISKAALKKISNIGFDLIYGAR 634
           + +++   AL+ + N+GFD +YGAR
Sbjct: 794 LKIELGDRALELLGNVGFDPVYGAR 818


>gi|386719694|ref|YP_006186020.1| clpB protein [Stenotrophomonas maltophilia D457]
 gi|384079256|emb|CCH13854.1| ClpB protein [Stenotrophomonas maltophilia D457]
          Length = 861

 Score =  806 bits (2083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/661 (58%), Positives = 521/661 (78%), Gaps = 24/661 (3%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIIN EVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINDEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ N+  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL++KY VHHGVEITDPAIVAA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKEKYAVHHGVEITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA+++++EIDSKPE +D+LERR+IQLKI+ E +K+E DE+S++
Sbjct: 380 YITDRQLPDKAIDLMDEAASRLRMEIDSKPEELDRLERRVIQLKIQREMLKKEKDEASRQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+ LE ++++L +IWK EK  ++ + +IKE++E+ +L++  A R+ D+  +S
Sbjct: 440 RLADLENDIDGLEREFSDLNEIWKSEKAALQGATKIKEQVEQAKLELEAAQRRQDFAKMS 499

Query: 314 KLKYGELNKLERIL---KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSK 370
           +++YG L +LE+ L   +E   KD         F L++ +V  EEIAE+VSR TGIPV+K
Sbjct: 500 EIQYGLLPQLEKQLAAAQEAEHKD---------FKLVQDRVTDEEIAEVVSRWTGIPVNK 550

Query: 371 IVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVG 430
           +++ ER+KLL +E +L  RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVG
Sbjct: 551 MLEGERDKLLRMEEVLHNRVVGQEEAIKVVSDAVRRSRAGLSDPNRPAGSFLFLGPTGVG 610

Query: 431 KTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKP 490
           KTELCK+L+  +F++ +++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+P
Sbjct: 611 KTELCKSLAEFLFDSADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRP 670

Query: 491 YSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK 550
           YSLILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I++M  
Sbjct: 671 YSLILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQDMSA 730

Query: 551 GDKE----IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLL 606
            D       +K AVM  V+ +FRPEFINR+DDI+VF  L+++ I  IA IQ+  L+ +L 
Sbjct: 731 DDSPEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARIQMRGLEKRLA 790

Query: 607 KMNMDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
           +  + L +S AA   + N+GFD +YGAR +   K+++   L     ++P A  I  G  +
Sbjct: 791 ERGLKLAVSDAAFDLLGNVGFDPVYGARPL---KRAIQAQL-----ENPLAQQILSGAFV 842

Query: 667 N 667
           N
Sbjct: 843 N 843


>gi|153834659|ref|ZP_01987326.1| chaperone ClpB [Vibrio harveyi HY01]
 gi|148868911|gb|EDL67969.1| chaperone ClpB [Vibrio harveyi HY01]
          Length = 857

 Score =  806 bits (2083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/622 (60%), Positives = 508/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+N+ E +YA LE++W  EK  +  +Q IK E+E+ R+ ++ A R  D   +S
Sbjct: 440 RLDVLNEELNEKEREYAELEEVWNAEKAALSGTQHIKGELEQARMDMDFARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  VSNAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEEVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFATLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L  +L +    L
Sbjct: 734 YQGIKNEVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S+ AL  I+ +GFD +YGAR
Sbjct: 794 EVSEKALDLIAQVGFDPVYGAR 815


>gi|109897662|ref|YP_660917.1| ATPase [Pseudoalteromonas atlantica T6c]
 gi|109699943|gb|ABG39863.1| ATPase AAA-2 [Pseudoalteromonas atlantica T6c]
          Length = 858

 Score =  806 bits (2083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/663 (58%), Positives = 528/663 (79%), Gaps = 13/663 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIG+PGVGKTAI EGLAQRIIN EVP  L +K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGQPGVGKTAIAEGLAQRIINSEVPEGLKNKRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKEEGRVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQFIEKDAALERRFQKVLVDEPSVEDTVAILRGLKERYELHHSVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++++DSKPE MD+LERR+IQLK+E +A+ +E DE+S K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQMDSKPEDMDRLERRIIQLKLEEQALAKEKDEASHK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI+ E  + EIK++ LEKIWK EK  ++ +Q I+ E+++ +L +  A R SD   +S
Sbjct: 440 RLELIEIEREQAEIKFSELEKIWKSEKQAMQGTQNIRAELDQAKLDLEIARRASDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE  L+  ++ + Q      +  LLK +V   EIA+++SR TGIPVSK+++
Sbjct: 500 ELQYGRIPELESKLELATESESQ----PLEHQLLKNRVTESEIADVLSRWTGIPVSKMLE 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KL+++E  L +RVVGQ EA++AVSNAIRRSR+GL+D  +P GSF+FLGPTGVGKTE
Sbjct: 556 GEKDKLMSMEAALHERVVGQSEAVNAVSNAIRRSRAGLADPNKPIGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+ E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKTLANFLFDTEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGD 552
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E   + D
Sbjct: 676 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQHSEND 735

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E +K +V+N +  +FRPEF+NR+D+ +VF  L    I SIA+ QL  L+N+L +  + L
Sbjct: 736 YEKMKQSVLNVLSTHFRPEFLNRVDETVVFHPLGLAQITSIASKQLQFLRNRLEEKGIGL 795

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
           +++ AALKKI+  GFD +YGAR +   K+++ + +     ++P A  I  G L+++G  S
Sbjct: 796 ELTDAALKKIAEAGFDPVYGARPL---KRAIQMEI-----ENPLAQKILSGKLVSEGVVS 847

Query: 673 LDT 675
           +D 
Sbjct: 848 IDA 850


>gi|373468011|ref|ZP_09559297.1| ATP-dependent chaperone protein ClpB [Haemophilus sp. oral taxon
           851 str. F0397]
 gi|371757049|gb|EHO45848.1| ATP-dependent chaperone protein ClpB [Haemophilus sp. oral taxon
           851 str. F0397]
          Length = 856

 Score =  806 bits (2083), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/621 (60%), Positives = 505/621 (81%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  SQ IK+E++  + ++ +A R  D   +S
Sbjct: 440 RLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L++    +        + TLL+ +V  EEIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPALEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +EN L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMENELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  ++   
Sbjct: 674 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKEESY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA+IQL  L  ++     +L 
Sbjct: 734 SEMKALVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELV 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D IYGAR
Sbjct: 794 FTDALLDFIGEVGYDPIYGAR 814


>gi|389781121|ref|ZP_10194528.1| ATP-dependent chaperone ClpB [Rhodanobacter spathiphylli B39]
 gi|388435401|gb|EIL92308.1| ATP-dependent chaperone ClpB [Rhodanobacter spathiphylli B39]
          Length = 863

 Score =  806 bits (2082), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/627 (60%), Positives = 506/627 (80%), Gaps = 12/627 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRII GEVP  L  +++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIIKGEVPEGLRDRRVLALDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLSDLSKQEGRVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D  SK+
Sbjct: 380 YIADRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDSESKQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+KLE ++++L +IWK EK  ++ + ++KE+IE+   ++  A R+ D+  +S
Sbjct: 440 RLADLETDIDKLEREFSDLNEIWKSEKASLQGTTRVKEQIEQAHQELESAQRRQDYAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG+L +LE+ L      + Q       F L++TKV +EEIAE+V+R TGIPVSK+++
Sbjct: 500 EIQYGKLPELEKQLAAAQAAETQ------DFKLVQTKVTAEEIAEVVARWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L KRVVGQDEA+ AV++AIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLKMEDELHKRVVGQDEAVHAVADAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+  ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALAEFMFDTTDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--G 551
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I++  +  G
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQMIQDASENGG 733

Query: 552 DKE----IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLK 607
           D E     +K +VM  V+ +FRPEFINR+D+I+VFR L++  I +IA IQL  L+ +L +
Sbjct: 734 DAEEQYTQMKASVMGVVQAHFRPEFINRLDEIVVFRPLDKAQIRAIAKIQLQYLERRLAE 793

Query: 608 MNMDLKISKAALKKISNIGFDLIYGAR 634
             + L ++  AL  + N+GFD +YGAR
Sbjct: 794 RQLKLDVADDALALLGNVGFDPVYGAR 820


>gi|343492233|ref|ZP_08730606.1| chaperone ClpB protein [Vibrio nigripulchritudo ATCC 27043]
 gi|342827573|gb|EGU61961.1| chaperone ClpB protein [Vibrio nigripulchritudo ATCC 27043]
          Length = 858

 Score =  806 bits (2082), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/622 (60%), Positives = 504/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGSLVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELSKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+D++S K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALVNEHDDASSK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +  E+ + E  Y+ LE+IWK EK  +  +Q IK E+E+ R+ ++ A R  D   +S
Sbjct: 440 RLKALNSELEEKERDYSELEEIWKAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLLK KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLKNKVSDAEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  VSNAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEEVLHKRVIGQQEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFATLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  VM  V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L N++ +   +L
Sbjct: 734 YDGMKEEVMEVVSKHFRPEFLNRVDESVVFHPLGKEHIKSIASIQLTRLGNRMAEKGYEL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S+ AL  IS +GFD +YGAR
Sbjct: 794 EVSEKALDLISEVGFDPVYGAR 815


>gi|339485554|ref|YP_004700082.1| ATP-dependent chaperone ClpB [Pseudomonas putida S16]
 gi|338836397|gb|AEJ11202.1| ATP-dependent chaperone ClpB [Pseudomonas putida S16]
          Length = 831

 Score =  806 bits (2082), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/621 (62%), Positives = 511/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 177 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERL 236

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 237 KGLLNELSKQEGQIILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEY 296

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 297 RQFIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 356

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KK
Sbjct: 357 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKK 416

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +EI++LE +YA+LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 417 RLEKLTEEIDRLEREYADLEEIWASEKAEVQGSAQIQQKIEQARQELETARRKGDLSRMA 476

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPV+K+++
Sbjct: 477 ELQYGVIPDLERSLQMVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLE 530

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL +RV+GQ+EA++AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 531 GEREKLLKMEELLHQRVIGQNEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 590

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 591 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 650

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 651 VLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 709

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID+++VF  L R+ I  I  IQL  L+++LL+  + L 
Sbjct: 710 EAQRAAVMDAVGSHFRPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLS 769

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 770 LSPEALDKLIAVGYDPVYGAR 790


>gi|333892371|ref|YP_004466246.1| ClpB protein [Alteromonas sp. SN2]
 gi|332992389|gb|AEF02444.1| ClpB protein [Alteromonas sp. SN2]
          Length = 858

 Score =  806 bits (2082), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/654 (58%), Positives = 520/654 (79%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+F+DELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKEEGRVILFVDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK++V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVVVDEPSVEDTIAILRGLKERYELHHSVDITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+I+IDSKPE MD+LERR+IQLK+E +A+ +E D++S K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRIQIDSKPEDMDRLERRIIQLKLEEQALAKETDDASHK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I+ E  + E KY + EK+W  EK  ++ +Q IK  +E+ +L +  A R SD   +S
Sbjct: 440 RLEMIELEREQAETKYNDFEKVWLDEKEAMQGTQTIKSALEQAKLDLEIARRASDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE  L+  S+      N   +  L+K KV   EIA+++SR TGIPV+K+++
Sbjct: 500 ELQYGRIPELEAKLERASE------NETRETKLVKNKVTEVEIADVLSRWTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E++L KRVVGQ EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLKMEDVLHKRVVGQGEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ E++++RIDMSEF+E+HS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAGFMFDTEDAMVRIDMSEFMERHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK-EMEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+++MTSNLGSD I+ + E+  
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVVIMTSNLGSDIIQNQHEESQ 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E +K +VM+ V  +FRPEFINR+DDI+VF  L +  I SIA IQL  L+ +L++    L
Sbjct: 734 YEEMKASVMSVVGQHFRPEFINRVDDIVVFHPLGKDEIKSIAKIQLAALRARLVEKGYKL 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            +S AA+ K+++ GFD +YGAR +   K+++     ++H ++P A  +  GDL+
Sbjct: 794 NLSGAAMDKLADAGFDPVYGARPL---KRAI-----QVHIENPLAQKLLSGDLV 839


>gi|385330270|ref|YP_005884221.1| protein disaggregation chaperone [Marinobacter adhaerens HP15]
 gi|311693420|gb|ADP96293.1| protein disaggregation chaperone [Marinobacter adhaerens HP15]
          Length = 858

 Score =  806 bits (2082), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/623 (60%), Positives = 504/623 (80%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+ L  KK+L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKKVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKQEGQIILFIDEIHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+ IEKDAA ERRFQK+LV EP  E+TI+ILRGL+++YEVHHGVE+TD AI+AA++LS+R
Sbjct: 320 RENIEKDAALERRFQKVLVSEPSEEDTIAILRGLKERYEVHHGVEVTDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++E+DSKPE +D+LERRLIQLKIE EA+K+E D +SKK
Sbjct: 380 YIADRQLPDKAIDLVDEAASQIRMEMDSKPEALDRLERRLIQLKIEREALKKETDAASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +   I  +E +YA+LE++W  EK  +  SQ+IK  +E+ R+ +  A R  D   +S
Sbjct: 440 RLSELSDVITGVEREYADLEEVWNTEKAALHGSQKIKSRLEQARIDLENARRAGDLGKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LER L   SQ ++       +  LL+ +V  EEIAEIVS+ TGIPVSK+++
Sbjct: 500 ELQYGQIPELERQLDMASQAEMM------EMKLLRNRVTDEEIAEIVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KL+ +E  L  RV+GQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLMRMEEALHGRVIGQDEAVEAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGSD I++ + G++
Sbjct: 674 LLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSDIIQQ-KAGEE 732

Query: 554 --EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E++K AVM  V  +FRPEFINR+D+++VF  L    I  IA IQ+  L  +L + +M 
Sbjct: 733 NYEVMKNAVMEVVGTHFRPEFINRVDEVVVFHPLAESQIQGIARIQIESLSKRLKEQDMK 792

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L++  AA++ ++ +G+D +YGAR
Sbjct: 793 LELDDAAMELLAEVGYDPVYGAR 815


>gi|421323615|ref|ZP_15774143.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1041(14)]
 gi|424594310|ref|ZP_18033648.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1040(13)]
 gi|395922830|gb|EJH33645.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1041(14)]
 gi|408036905|gb|EKG73321.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1040(13)]
          Length = 857

 Score =  806 bits (2082), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 506/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++WK EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 440 RLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E++L KRV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L+ +L + +  L
Sbjct: 734 YQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL  I+++GFD +YGAR
Sbjct: 794 EVDDEALDLIAHVGFDPVYGAR 815


>gi|262191803|ref|ZP_06049974.1| ClpB protein [Vibrio cholerae CT 5369-93]
 gi|262032290|gb|EEY50857.1| ClpB protein [Vibrio cholerae CT 5369-93]
          Length = 857

 Score =  806 bits (2082), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 506/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++WK EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 440 RLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E++L KRV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L+ +L + +  L
Sbjct: 734 YQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL  I+++GFD +YGAR
Sbjct: 794 EVDDEALDLIAHVGFDPVYGAR 815


>gi|375130115|ref|YP_004992214.1| clpB protein [Vibrio furnissii NCTC 11218]
 gi|315179288|gb|ADT86202.1| clpB protein [Vibrio furnissii NCTC 11218]
          Length = 857

 Score =  806 bits (2082), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/663 (57%), Positives = 522/663 (78%), Gaps = 15/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I++++DSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRMQMDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++W  EK  +  +Q IK E+E+ RL +  A R  D   +S
Sbjct: 440 RLNILNEELQEKERDYAELEEVWNAEKAALSGTQHIKSELEQARLDLEVARRAGDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPV+K+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E++L +RV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEDVLHQRVIGQVEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFASLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM  V  +FRPEF+NR+D+ +VF  L R++I SIA+IQL  L+ +LL+ + +L
Sbjct: 734 YQGIKEQVMEVVSKHFRPEFLNRVDETVVFHPLGREHIKSIASIQLERLRKRLLEKDFEL 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
           ++S  AL  I+ +GFD +YGAR +   K+++     + + ++P A  I  G  +   P  
Sbjct: 794 QVSDEALDLIAQVGFDPVYGARPL---KRAI-----QQNVENPLAKSILAGTFLPGTPIK 845

Query: 673 LDT 675
           LD 
Sbjct: 846 LDV 848


>gi|145640973|ref|ZP_01796555.1| DNA polymerase I [Haemophilus influenzae R3021]
 gi|145274487|gb|EDK14351.1| DNA polymerase I [Haemophilus influenzae 22.4-21]
          Length = 708

 Score =  806 bits (2082), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/621 (60%), Positives = 506/621 (81%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 52  NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 111

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+GTGK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 112 KAVLNELSKEEGRVILFIDEIHTMVGTGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 171

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 172 RQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHR 231

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 232 YISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRK 291

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  SQ IK+E++ V+ ++ +A R  D   +S
Sbjct: 292 RLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTVKTELEQARRAGDLAKMS 351

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L++         +   + TLL+ +V  EEIAE++S+ TGIPVSK+++
Sbjct: 352 ELQYGRIPDLEKQLEQAET------SEGKEMTLLRYRVTDEEIAEVLSKATGIPVSKMME 405

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 406 GEKEKLLRMEDELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 465

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 466 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 525

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  +    
Sbjct: 526 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESY 585

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA+IQL  L  ++     +L 
Sbjct: 586 SEMKALVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELV 645

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D IYGAR
Sbjct: 646 FTDALLDFIGEVGYDPIYGAR 666


>gi|156973326|ref|YP_001444233.1| hypothetical protein VIBHAR_01007 [Vibrio harveyi ATCC BAA-1116]
 gi|156524920|gb|ABU70006.1| hypothetical protein VIBHAR_01007 [Vibrio harveyi ATCC BAA-1116]
          Length = 857

 Score =  806 bits (2082), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/622 (60%), Positives = 508/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+N+ E +YA LE++W  EK  +  +Q IK E+E+ R+ ++ A R  D   +S
Sbjct: 440 RLDVLNEELNEKEREYAELEEVWNAEKAALSGTQHIKGELEQARMDMDFARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  VSNAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEEVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFATLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L  +L +    L
Sbjct: 734 YQGIKNEVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +IS+ AL  I+ +GFD +YGAR
Sbjct: 794 EISEKALDLIAQVGFDPVYGAR 815


>gi|160871680|ref|ZP_02061812.1| ATP-dependent chaperone ClpB [Rickettsiella grylli]
 gi|160872386|ref|ZP_02062518.1| ATP-dependent chaperone ClpB [Rickettsiella grylli]
 gi|159120479|gb|EDP45817.1| ATP-dependent chaperone ClpB [Rickettsiella grylli]
 gi|159121185|gb|EDP46523.1| ATP-dependent chaperone ClpB [Rickettsiella grylli]
          Length = 868

 Score =  806 bits (2082), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 389/624 (62%), Positives = 506/624 (81%), Gaps = 10/624 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTA+VEGLAQRI+N EVP  L +K++L LDI  L+AG KYRGEFE+RL
Sbjct: 201 NNPVLIGEPGVGKTAVVEGLAQRIVNHEVPEGLRNKRLLALDIGSLIAGAKYRGEFEERL 260

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHCIGATTLNEY
Sbjct: 261 KAVLNELAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGQLHCIGATTLNEY 320

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R YIEKDAA ERRFQKILV+EP++E+TI+ILRGL+++YE+HHGVEI D AIVAA+ LS+R
Sbjct: 321 RNYIEKDAALERRFQKILVDEPNVEDTIAILRGLKQRYEIHHGVEIMDSAIVAAATLSHR 380

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA++I+IEIDSKPE +D+L+RRLIQLKIE EA+K+E DESSK 
Sbjct: 381 YISDRNLPDKAIDLIDEAASRIRIEIDSKPEKLDRLDRRLIQLKIEREALKKETDESSKI 440

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +  EI +L  KYA+L +IWK EK  ++  Q+IK E+EK + ++ KA R  D   +S
Sbjct: 441 RLKNLDNEITELSKKYADLNEIWKAEKATLQGEQKIKSELEKAQFELEKARRSGDLNRMS 500

Query: 314 KLKYGELNKLER--ILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +L+YG +  LE+  +  +K +K  Q P       L++ KV  +EIAEIVS+ TGIPV+K+
Sbjct: 501 ELQYGHIPALEKKLVAAQKIEKKEQ-P------ALIRNKVSEKEIAEIVSQWTGIPVAKM 553

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ EREKLL +E+ L KRVVGQDEAIS V+NAIRRSR+GLSD  RP GSF+F GPTGVGK
Sbjct: 554 LEGEREKLLQMEDALHKRVVGQDEAISVVANAIRRSRAGLSDPNRPIGSFIFSGPTGVGK 613

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TE+CK L+  +F+++E+++R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPY
Sbjct: 614 TEVCKALAGFLFDSDEAMVRLDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPY 673

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EK 550
           S++LLDEIEKA++DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS  I+E   K
Sbjct: 674 SVVLLDEIEKAHADVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSQIIQEFTSK 733

Query: 551 GDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNM 610
            D   +K  +M+ +  +FRPEFINR+D+++VF  LN   I SI  IQL  L+ +L + ++
Sbjct: 734 QDYAALKSTLMDIIAQHFRPEFINRVDEVVVFHALNETQIHSITKIQLQRLRQRLGERDL 793

Query: 611 DLKISKAALKKISNIGFDLIYGAR 634
            L++S+AA+  I+ +G+D +YGAR
Sbjct: 794 HLEVSEAAINHIAKMGYDPVYGAR 817


>gi|444921257|ref|ZP_21241094.1| Chaperone protein ClpB [Wohlfahrtiimonas chitiniclastica SH04]
 gi|444507616|gb|ELV07791.1| Chaperone protein ClpB [Wohlfahrtiimonas chitiniclastica SH04]
          Length = 867

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/651 (60%), Positives = 521/651 (80%), Gaps = 18/651 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI+EGLAQRI+NGEVP  L +K +L LD+  L+AG K+RGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIIEGLAQRIVNGEVPEGLKNKSVLSLDMGALIAGAKFRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+      II+FIDE+HTM+G GK +G++DAGNMLKP LSRGELHCIGATTL+EY
Sbjct: 259 KAVLNELGKQDGRIILFIDEIHTMVGAGKGDGAMDAGNMLKPALSRGELHCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQ++LV+EP +E+TI+ILRGL+++YE+HHGVEITDPAIVAA+ LS R
Sbjct: 319 RQYIEKDPALERRFQRVLVDEPTVEDTIAILRGLKERYEIHHGVEITDPAIVAAATLSNR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ +++EIDSKPE MDKL+RRLIQLKIE EAIK+E D++SKK
Sbjct: 379 YITDRQLPDKAIDLIDEAASLVRMEIDSKPEEMDKLDRRLIQLKIEREAIKKEKDDASKK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++++EI  L  +Y++LE++WK EK++++ +  IKE++EK R ++  A R  D   +S
Sbjct: 439 RLEILEQEIEDLSKEYSDLEEVWKKEKSVMQGATSIKEDLEKARNEMEAARRSGDLAKMS 498

Query: 314 KLKYGELNKLERILKE--KSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +L+YG + +LE  LKE   ++ D++  N      L++T V SEEIAEIVS+ TGIPV+++
Sbjct: 499 ELQYGRIPELEAQLKEAQANEGDVERKNQ-----LVRTNVTSEEIAEIVSKWTGIPVTRM 553

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ EREKLL++E+ L  +V+GQ EAISAVS+A+RRSR+GLSD  RP GSF+FLGPTGVGK
Sbjct: 554 LEGEREKLLHMESFLANQVIGQKEAISAVSDAVRRSRAGLSDPNRPIGSFLFLGPTGVGK 613

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TEL K L+  +F++E ++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PY
Sbjct: 614 TELTKALANFLFDSEAAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPY 673

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--- 548
           S+ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS  I+E    
Sbjct: 674 SVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSSIIQEQTHA 733

Query: 549 -----EKGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKN 603
                EK   E IK +VM+ V  +FRPEFINRIDDI+VF  LN++NI SIA +Q++ +  
Sbjct: 734 LSNMDEKDQYEAIKASVMDVVGQHFRPEFINRIDDIVVFHPLNKENIRSIAKLQVDRVIK 793

Query: 604 KLLKMNMDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKS 654
           +L    ++L I+  AL ++  +G+D ++GAR +   K+++ I L+    KS
Sbjct: 794 RLADQEIELAITDGALDELGEVGYDPVFGARPL---KRAIQIHLENPLAKS 841


>gi|325273285|ref|ZP_08139562.1| ATP-dependent chaperone ClpB [Pseudomonas sp. TJI-51]
 gi|324101570|gb|EGB99139.1| ATP-dependent chaperone ClpB [Pseudomonas sp. TJI-51]
          Length = 854

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/621 (62%), Positives = 509/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KGLLNELSKQEGQIILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQFIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLTEEIERLEREYSDLEEIWASEKAEVQGSAQIQQKIEQARQELEAARRKGDLSRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL +RV+GQ EA++AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLKMEALLHQRVIGQGEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 VLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID+++VF  L R+ I  I  IQL  L+++LL+  + L 
Sbjct: 733 EAQRAAVMDAVGAHFRPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLS 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLIAVGYDPVYGAR 813


>gi|421502047|ref|ZP_15949003.1| ATPase [Pseudomonas mendocina DLHK]
 gi|400347331|gb|EJO95685.1| ATPase [Pseudomonas mendocina DLHK]
          Length = 854

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/621 (61%), Positives = 512/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKDKRLLSLDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKQEGRIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+R
Sbjct: 320 RQFIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL+ ++++I KLE +YA+LE+IWK EK  ++ S QI++ IE+ + ++  A RK D   ++
Sbjct: 440 RLVKLEEDIAKLEKEYADLEEIWKSEKAEVQGSAQIQQRIEQAKTELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  ++  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKSENQLLRNKVTDEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL +RV+GQDEA+ AV+NA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLKMEGLLHQRVIGQDEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L+DE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GDK
Sbjct: 674 VLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQEL-VGDK 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID+++VF  L R+ I  IA IQL  L+ +L +  + L+
Sbjct: 733 EAQRAAVMDAVSSHFRPEFINRIDEVVVFEPLGREQIAGIAEIQLQRLRGRLAERELSLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++  AL K+  +G+D +YGAR
Sbjct: 793 LTPEALDKLIAVGYDPVYGAR 813


>gi|418354585|ref|ZP_12957307.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-61A1]
 gi|421328011|ref|ZP_15778526.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1042(15)]
 gi|423159453|ref|ZP_17146425.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-33A2]
 gi|424655872|ref|ZP_18093174.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-81A2]
 gi|443534469|ref|ZP_21100381.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-80A1]
 gi|356450009|gb|EHI02745.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-33A2]
 gi|356453839|gb|EHI06499.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-61A1]
 gi|395930596|gb|EJH41343.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1042(15)]
 gi|408056911|gb|EKG91782.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-81A2]
 gi|443462473|gb|ELT33512.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-80A1]
          Length = 823

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 506/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 166 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 225

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 226 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 285

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 286 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 345

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 346 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 405

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++WK EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 406 RLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMS 465

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 466 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLE 519

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E++L KRV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 520 AEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 579

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 580 LCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 639

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E   + D
Sbjct: 640 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLD 699

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L+ +L + +  L
Sbjct: 700 YQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQL 759

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL  I+++GFD +YGAR
Sbjct: 760 EVDDEALDLIAHVGFDPVYGAR 781


>gi|153801889|ref|ZP_01956475.1| clpB protein [Vibrio cholerae MZO-3]
 gi|229519981|ref|ZP_04409411.1| ClpB protein [Vibrio cholerae TM 11079-80]
 gi|421353515|ref|ZP_15803848.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-45]
 gi|124122600|gb|EAY41343.1| clpB protein [Vibrio cholerae MZO-3]
 gi|229343033|gb|EEO08021.1| ClpB protein [Vibrio cholerae TM 11079-80]
 gi|395954862|gb|EJH65471.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-45]
          Length = 857

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 506/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++WK EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 440 RLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E++L KRV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L+ +L + +  L
Sbjct: 734 YQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL  I+++GFD +YGAR
Sbjct: 794 EVDDEALDLIAHVGFDPVYGAR 815


>gi|424669901|ref|ZP_18106926.1| chaperone ClpB [Stenotrophomonas maltophilia Ab55555]
 gi|401071972|gb|EJP80483.1| chaperone ClpB [Stenotrophomonas maltophilia Ab55555]
          Length = 861

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/661 (58%), Positives = 521/661 (78%), Gaps = 24/661 (3%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIIN EVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINDEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ N+  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL++KY VHHGVEITDPAIVAA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKEKYAVHHGVEITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA+++++EIDSKPE +D+LERR+IQLKI+ E +K+E DE+S++
Sbjct: 380 YITDRQLPDKAIDLMDEAASRLRMEIDSKPEELDRLERRVIQLKIQREMLKKEKDEASRQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+ LE ++++L +IWK EK  ++ + +IKE++E+ +L++  A R+ D+  +S
Sbjct: 440 RLADLENDIDGLEREFSDLNEIWKSEKAALQGATKIKEQVEQAKLELEAAQRRQDFAKMS 499

Query: 314 KLKYGELNKLERIL---KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSK 370
           +++YG L +LE+ L   +E   KD         F L++ +V  EEIAE+VSR TGIPV+K
Sbjct: 500 EIQYGLLPQLEKQLAAAQEAEHKD---------FKLVQDRVTDEEIAEVVSRWTGIPVNK 550

Query: 371 IVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVG 430
           +++ ER+KLL +E +L  RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVG
Sbjct: 551 MLEGERDKLLRMEEVLHNRVVGQEEAIKVVSDAVRRSRAGLSDPNRPAGSFLFLGPTGVG 610

Query: 431 KTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKP 490
           KTELCK+L+  +F++ +++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+P
Sbjct: 611 KTELCKSLAEFLFDSADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRP 670

Query: 491 YSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK 550
           YSLILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I++M  
Sbjct: 671 YSLILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQDMSA 730

Query: 551 GDKE----IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLL 606
            D       +K AVM  V+ +FRPEFINR+DDI+VF  L+++ I  IA IQ+  L+ +L 
Sbjct: 731 DDSPEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARIQMRGLEKRLA 790

Query: 607 KMNMDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
           +  + L +S AA   + N+GFD +YGAR +   K+++   L     ++P A  I  G  +
Sbjct: 791 ERGLKLAVSDAAFDLLGNVGFDPVYGARPL---KRAIQSQL-----ENPLAQQILSGAFV 842

Query: 667 N 667
           N
Sbjct: 843 N 843


>gi|154706915|ref|YP_001425322.1| ClpB [Coxiella burnetii Dugway 5J108-111]
 gi|154356201|gb|ABS77663.1| ClpB [Coxiella burnetii Dugway 5J108-111]
          Length = 859

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 402/662 (60%), Positives = 532/662 (80%), Gaps = 12/662 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKQKRLLALDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+I+  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLKDIAKEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LVEEP  E+ I+ILRGL+++YEVHHGVEITDPAI+AA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVLVEEPSTEDAIAILRGLKERYEVHHGVEITDPAIIAAATLSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++E+DSKP  +D+LERRLIQLKIE EA+K+E DE+SKK
Sbjct: 380 YITDRNLPDKAIDLIDEAASQIRMEMDSKPVELDRLERRLIQLKIEREALKKETDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI  +E +Y++LE++WK EK  +  +QQIKEE+E+ R+++  A R  D   +S
Sbjct: 440 RLSDLETEIKNVEKEYSDLEEVWKSEKASLHGTQQIKEELEQARIELEAAGRAGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL+YG + +L++ LK  SQK+ Q  ++     LL+++V  EE+AE+VS+ T IPVSK+++
Sbjct: 500 KLQYGIIPELDKKLKAASQKEEQFHDH----KLLRSRVTEEEVAEVVSKWTHIPVSKMLE 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E  L KRV+GQDEA++AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 556 GEREKLLHMETELHKRVIGQDEAVNAVANAIRRSRAGLSDPNRPVGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+A +F+ E++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RR+PYS+
Sbjct: 616 LCKALAAFLFDTEDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA++DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+E    + 
Sbjct: 676 ILLDEIEKAHNDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIREFSGENY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K AVM  V  +FRPEFINRID+ +VF  L ++ I +IA IQ++ +K +L + +  L 
Sbjct: 736 DKMKDAVMEVVAQHFRPEFINRIDEAVVFHSLKKEQIRNIAIIQIDRIKKRLKEKDYQLT 795

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLK-KIHKKSPEANFIFLGDLIN---KG 669
           IS  AL  +S +G+D +YGAR +   K+ L   L+  + +K  E  F+  G LIN   KG
Sbjct: 796 ISDDALDYLSGLGYDPVYGARPL---KRVLQQQLENPLSQKILEGKFV-PGSLINIEKKG 851

Query: 670 PQ 671
            Q
Sbjct: 852 EQ 853


>gi|114561854|ref|YP_749367.1| ATPase [Shewanella frigidimarina NCIMB 400]
 gi|114333147|gb|ABI70529.1| ATPase AAA-2 domain protein [Shewanella frigidimarina NCIMB 400]
          Length = 865

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/622 (60%), Positives = 503/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  + +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 208 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGSLIAGAKYRGEFEERL 267

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 268 KAVLNELSQEEGQVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEY 327

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK++V+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+R
Sbjct: 328 RQYIEKDAALERRFQKVIVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATMSHR 387

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE++D+LERR IQLK+E +A+ +E DE+S+K
Sbjct: 388 YISDRKLPDKAIDLIDEAASSIRMQIDSKPEVLDRLERRAIQLKLEEQALSKESDEASRK 447

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ E+  +E K A + +IW  EK  +  +Q IK ++E+ R+ +  A R  D   +S
Sbjct: 448 RLEFLQHELRDVESKAAEMNEIWHTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMS 507

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   SQ ++Q        TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 508 ELQYGRIPELEKQLDLASQAEMQ------DMTLLRNKVTDVEIAEVLSKATGIPVSKMLE 561

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E  L +RV+GQ+EA+ AVSNAIRRSR+GL+D +RP GSF+FLGPTGVGKTE
Sbjct: 562 GEREKLLHMETALHERVIGQNEAVDAVSNAIRRSRAGLADPQRPIGSFLFLGPTGVGKTE 621

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F++E +++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 622 LCKSLAKFLFDSESALVRIDMSEFMEKHTVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSV 681

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E      
Sbjct: 682 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEGFGHTS 741

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E +K  VMN V   FRPEF+NRID+ +VF  L+ +NI  IA+IQ  +L+ +L++   D+
Sbjct: 742 YEEMKAGVMNVVTQSFRPEFLNRIDESVVFHPLDAENIKHIASIQFELLRKRLIEKEFDI 801

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S AAL  I+  GFD +YGAR
Sbjct: 802 ELSDAALSLIAEAGFDPVYGAR 823


>gi|15640730|ref|NP_230360.1| clpB protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121587768|ref|ZP_01677528.1| clpB protein [Vibrio cholerae 2740-80]
 gi|227080891|ref|YP_002809442.1| clpB protein [Vibrio cholerae M66-2]
 gi|229505671|ref|ZP_04395181.1| ClpB protein [Vibrio cholerae BX 330286]
 gi|229508756|ref|ZP_04398249.1| ClpB protein [Vibrio cholerae B33]
 gi|229519494|ref|ZP_04408937.1| ClpB protein [Vibrio cholerae RC9]
 gi|229608689|ref|YP_002879337.1| ClpB protein [Vibrio cholerae MJ-1236]
 gi|254851041|ref|ZP_05240391.1| chaperone protein clpB [Vibrio cholerae MO10]
 gi|255743832|ref|ZP_05417788.1| ClpB protein [Vibrio cholera CIRS 101]
 gi|262156051|ref|ZP_06029170.1| ClpB protein [Vibrio cholerae INDRE 91/1]
 gi|360034620|ref|YP_004936383.1| chaperone ClpB (heat-shock protein) [Vibrio cholerae O1 str.
           2010EL-1786]
 gi|379740566|ref|YP_005332535.1| chaperone ClpB (heat-shock protein) [Vibrio cholerae IEC224]
 gi|417812757|ref|ZP_12459416.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-49A2]
 gi|417815624|ref|ZP_12462257.1| ATP-dependent chaperone ClpB [Vibrio cholerae HCUF01]
 gi|418331759|ref|ZP_12942700.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-06A1]
 gi|418336179|ref|ZP_12945080.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-23A1]
 gi|418343016|ref|ZP_12949811.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-28A1]
 gi|418348183|ref|ZP_12952918.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-43A1]
 gi|419825177|ref|ZP_14348683.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae CP1033(6)]
 gi|421315766|ref|ZP_15766338.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1032(5)]
 gi|421319565|ref|ZP_15770124.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1038(11)]
 gi|421330936|ref|ZP_15781418.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1046(19)]
 gi|421334605|ref|ZP_15785073.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1048(21)]
 gi|421338497|ref|ZP_15788933.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-20A2]
 gi|421345598|ref|ZP_15795984.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-46A1]
 gi|422890818|ref|ZP_16933229.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-40A1]
 gi|422901693|ref|ZP_16937056.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-48A1]
 gi|422905918|ref|ZP_16940763.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-70A1]
 gi|422912513|ref|ZP_16947039.1| ATP-dependent chaperone ClpB [Vibrio cholerae HFU-02]
 gi|422924996|ref|ZP_16958026.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-38A1]
 gi|423144316|ref|ZP_17131930.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-19A1]
 gi|423148968|ref|ZP_17136327.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-21A1]
 gi|423152813|ref|ZP_17140011.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-22A1]
 gi|423155618|ref|ZP_17142731.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-32A1]
 gi|423164139|ref|ZP_17150926.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-48B2]
 gi|423730272|ref|ZP_17703590.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-17A1]
 gi|423748838|ref|ZP_17711602.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-50A2]
 gi|423891990|ref|ZP_17725677.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-62A1]
 gi|423926765|ref|ZP_17730293.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-77A1]
 gi|424001320|ref|ZP_17744409.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-17A2]
 gi|424005476|ref|ZP_17748460.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-37A1]
 gi|424023486|ref|ZP_17763150.1| ATP-dependent chaperone protein ClpB, partial [Vibrio cholerae
           HC-62B1]
 gi|424026290|ref|ZP_17765906.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-69A1]
 gi|424585615|ref|ZP_18025209.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1030(3)]
 gi|424598175|ref|ZP_18037373.1| ATP-dependent chaperone ClpB [Vibrio Cholerae CP1044(17)]
 gi|424600929|ref|ZP_18040086.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1047(20)]
 gi|424605908|ref|ZP_18044873.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1050(23)]
 gi|424609742|ref|ZP_18048600.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-39A1]
 gi|424612543|ref|ZP_18051350.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-41A1]
 gi|424616366|ref|ZP_18055057.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-42A1]
 gi|424621302|ref|ZP_18059830.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-47A1]
 gi|424644280|ref|ZP_18082034.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-56A2]
 gi|424651923|ref|ZP_18089447.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-57A2]
 gi|440709003|ref|ZP_20889663.1| ClpB protein [Vibrio cholerae 4260B]
 gi|443502818|ref|ZP_21069807.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-64A1]
 gi|443506731|ref|ZP_21073521.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-65A1]
 gi|443510838|ref|ZP_21077502.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-67A1]
 gi|443514400|ref|ZP_21080939.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-68A1]
 gi|443518213|ref|ZP_21084630.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-71A1]
 gi|443523080|ref|ZP_21089320.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-72A2]
 gi|443530710|ref|ZP_21096726.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-7A1]
 gi|443538060|ref|ZP_21103916.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-81A1]
 gi|449053972|ref|ZP_21732640.1| ClpB protein [Vibrio cholerae O1 str. Inaba G4222]
 gi|54035907|sp|Q9KU18.1|CLPB_VIBCH RecName: Full=Chaperone protein ClpB
 gi|9655153|gb|AAF93876.1| clpB protein [Vibrio cholerae O1 biovar El Tor str. N16961]
 gi|121547995|gb|EAX58075.1| clpB protein [Vibrio cholerae 2740-80]
 gi|227008779|gb|ACP04991.1| clpB protein [Vibrio cholerae M66-2]
 gi|229344183|gb|EEO09158.1| ClpB protein [Vibrio cholerae RC9]
 gi|229354280|gb|EEO19210.1| ClpB protein [Vibrio cholerae B33]
 gi|229357894|gb|EEO22811.1| ClpB protein [Vibrio cholerae BX 330286]
 gi|229371344|gb|ACQ61767.1| ClpB protein [Vibrio cholerae MJ-1236]
 gi|254846746|gb|EET25160.1| chaperone protein clpB [Vibrio cholerae MO10]
 gi|255738463|gb|EET93852.1| ClpB protein [Vibrio cholera CIRS 101]
 gi|262030087|gb|EEY48732.1| ClpB protein [Vibrio cholerae INDRE 91/1]
 gi|340042924|gb|EGR03887.1| ATP-dependent chaperone ClpB [Vibrio cholerae HCUF01]
 gi|340043218|gb|EGR04178.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-49A2]
 gi|341625017|gb|EGS50490.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-70A1]
 gi|341626188|gb|EGS51594.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-48A1]
 gi|341626667|gb|EGS52030.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-40A1]
 gi|341640689|gb|EGS65270.1| ATP-dependent chaperone ClpB [Vibrio cholerae HFU-02]
 gi|341648353|gb|EGS72417.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-38A1]
 gi|356420482|gb|EHH74008.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-06A1]
 gi|356421196|gb|EHH74701.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-21A1]
 gi|356426019|gb|EHH79358.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-19A1]
 gi|356433702|gb|EHH86889.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-23A1]
 gi|356434213|gb|EHH87395.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-22A1]
 gi|356437743|gb|EHH90829.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-28A1]
 gi|356442787|gb|EHH95622.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-32A1]
 gi|356447761|gb|EHI00549.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-43A1]
 gi|356456276|gb|EHI08885.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-48B2]
 gi|356645774|gb|AET25829.1| chaperone ClpB (heat-shock protein) [Vibrio cholerae O1 str.
           2010EL-1786]
 gi|378794076|gb|AFC57547.1| chaperone ClpB (heat-shock protein) [Vibrio cholerae IEC224]
 gi|395922507|gb|EJH33323.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1032(5)]
 gi|395925890|gb|EJH36687.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1038(11)]
 gi|395934789|gb|EJH45527.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1046(19)]
 gi|395937398|gb|EJH48117.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1048(21)]
 gi|395944933|gb|EJH55605.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-20A2]
 gi|395948543|gb|EJH59188.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-46A1]
 gi|395962410|gb|EJH72709.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-56A2]
 gi|395963603|gb|EJH73866.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-57A2]
 gi|395966424|gb|EJH76549.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-42A1]
 gi|395974598|gb|EJH84123.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-47A1]
 gi|395977461|gb|EJH86871.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1030(3)]
 gi|395979149|gb|EJH88513.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1047(20)]
 gi|408009468|gb|EKG47374.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-39A1]
 gi|408016239|gb|EKG53793.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-41A1]
 gi|408044616|gb|EKG80522.1| ATP-dependent chaperone ClpB [Vibrio Cholerae CP1044(17)]
 gi|408046325|gb|EKG82025.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1050(23)]
 gi|408611448|gb|EKK84809.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae CP1033(6)]
 gi|408627125|gb|EKK99950.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-17A1]
 gi|408640334|gb|EKL12129.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-50A2]
 gi|408658151|gb|EKL29223.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-77A1]
 gi|408659180|gb|EKL30235.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-62A1]
 gi|408848198|gb|EKL88251.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-37A1]
 gi|408849139|gb|EKL89172.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-17A2]
 gi|408873240|gb|EKM12442.1| ATP-dependent chaperone protein ClpB, partial [Vibrio cholerae
           HC-62B1]
 gi|408881203|gb|EKM20113.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-69A1]
 gi|439975744|gb|ELP51856.1| ClpB protein [Vibrio cholerae 4260B]
 gi|443432938|gb|ELS75459.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-64A1]
 gi|443436762|gb|ELS82879.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-65A1]
 gi|443440325|gb|ELS90014.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-67A1]
 gi|443444420|gb|ELS97694.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-68A1]
 gi|443448255|gb|ELT04890.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-71A1]
 gi|443451030|gb|ELT11294.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-72A2]
 gi|443458911|gb|ELT26306.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-7A1]
 gi|443466493|gb|ELT41151.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-81A1]
 gi|448266545|gb|EMB03772.1| ClpB protein [Vibrio cholerae O1 str. Inaba G4222]
          Length = 857

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 506/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++WK EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 440 RLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E++L KRV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L+ +L + +  L
Sbjct: 734 YQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL  I+++GFD +YGAR
Sbjct: 794 EVDDEALDLIAHVGFDPVYGAR 815


>gi|410626519|ref|ZP_11337280.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
           mesophila KMM 241]
 gi|410154058|dbj|GAC24049.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
           mesophila KMM 241]
          Length = 858

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/662 (58%), Positives = 527/662 (79%), Gaps = 13/662 (1%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIG+PGVGKTAI EGLAQRIIN EVP  L +K++L LD+  L+AG K+RGEFE+RLK
Sbjct: 201 NPVLIGQPGVGKTAIAEGLAQRIINSEVPEGLKNKRVLSLDMGALIAGAKFRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L E++  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 261 AVLNELAKEEGRVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           Q+IEKDAA ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY
Sbjct: 321 QFIEKDAALERRFQKVLVDEPSVEDTVAILRGLKERYELHHSVEITDPAIVAAASLSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           ISDR +PDKAIDLIDEAA+ I++++DSKPE MD+LERR+IQLK+E +A+ +E DE+S KR
Sbjct: 381 ISDRQLPDKAIDLIDEAASSIRMQMDSKPEDMDRLERRIIQLKLEEQALAKEKDEASHKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L LI+ E  + EIK++ LEKIWK EK  ++ +Q I+ E+++ +L +  A R SD   +S+
Sbjct: 441 LELIEIEREQAEIKFSELEKIWKSEKQAMQGTQNIRAELDQAKLDLEIARRASDLSRMSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG + +LE  L+  ++ + Q      +  LLK +V   EIA+++SR TGIPVSK+++ 
Sbjct: 501 LQYGRIPELESKLELATESESQ----PLEHQLLKNRVTESEIADVLSRWTGIPVSKMLEG 556

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           E++KL+++E  L +RVVGQ EA++AVSNAIRRSR+GL+D  +P GSF+FLGPTGVGKTEL
Sbjct: 557 EKDKLMSMETALHERVVGQSEAVNAVSNAIRRSRAGLADPNKPIGSFLFLGPTGVGKTEL 616

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CKTL+  +F+ E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+I
Sbjct: 617 CKTLANFLFDTEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVI 676

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDK 553
           LLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++F+N++I+MTSNLGSD I+E   + D 
Sbjct: 677 LLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNSVIIMTSNLGSDIIQEQHSENDY 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K +V+N +  +FRPEF+NR+D+ +VF  L    I SIA+ QL  L+N+L +  + L+
Sbjct: 737 EKMKQSVLNVLSTHFRPEFLNRVDETVVFHPLGLAQITSIASKQLQFLRNRLEEKGIGLE 796

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
           ++ AALKKI+  GFD +YGAR +   K+++ + +     ++P A  I  G L+++G  S+
Sbjct: 797 LTDAALKKIAEAGFDPVYGARPL---KRAIQMEI-----ENPLAQKILSGKLVSEGVVSI 848

Query: 674 DT 675
           D 
Sbjct: 849 DA 850


>gi|153829376|ref|ZP_01982043.1| clpB protein, partial [Vibrio cholerae 623-39]
 gi|148875159|gb|EDL73294.1| clpB protein [Vibrio cholerae 623-39]
          Length = 839

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 505/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++WK EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 440 RLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L+ +L + +  L
Sbjct: 734 YQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL  I+++GFD +YGAR
Sbjct: 794 EVDDEALDLIAHVGFDPVYGAR 815


>gi|384420306|ref|YP_005629666.1| chaperone ClpB [Xanthomonas oryzae pv. oryzicola BLS256]
 gi|353463219|gb|AEQ97498.1| chaperone ClpB [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 906

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/626 (61%), Positives = 507/626 (80%), Gaps = 14/626 (2%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG K+RGEFE+RLK
Sbjct: 246 NPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERLK 305

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L ++S  +  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EYR
Sbjct: 306 AVLSDLSKTEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEYR 365

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           +YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS RY
Sbjct: 366 KYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNRY 425

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++R
Sbjct: 426 ITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQR 485

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L  ++ +I+KLE ++ +L ++WK EK  ++ + +IKE+IE  +L++  A R+ D+  +S+
Sbjct: 486 LADLESDIDKLEREFYDLNELWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMSE 545

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKIV 372
           ++YG L +LE        K + L N    + F L++ +V +EEIAE+VSR TGIPV+K++
Sbjct: 546 IQYGVLPQLE--------KQMLLANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKML 597

Query: 373 QVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKT 432
           + ER+KLL +E+ L  RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVGKT
Sbjct: 598 EGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKT 657

Query: 433 ELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYS 492
           ELCK L+  +F++ E++IRIDMSEFIEKHS++RLIGAPPGY+GYEEGGYLTE VRR+PY+
Sbjct: 658 ELCKALADFLFDSTEAMIRIDMSEFIEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYA 717

Query: 493 LILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KG 551
           LILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+   G
Sbjct: 718 LILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQQIQELSGDG 777

Query: 552 DKEI---IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKM 608
             E    +K AVM  V+ +FRPEFINR+DDI+VF  L++  I SIA IQL  L+ +L + 
Sbjct: 778 SAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAER 837

Query: 609 NMDLKISKAALKKISNIGFDLIYGAR 634
            + L +  AAL+ + N+GFD +YGAR
Sbjct: 838 GLRLDLDDAALELLGNVGFDPVYGAR 863


>gi|190575587|ref|YP_001973432.1| heat shock chaperone ClpB [Stenotrophomonas maltophilia K279a]
 gi|190013509|emb|CAQ47144.1| putative heat shock chaperone ClpB [Stenotrophomonas maltophilia
           K279a]
          Length = 861

 Score =  806 bits (2081), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/661 (58%), Positives = 521/661 (78%), Gaps = 24/661 (3%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIIN EVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINDEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ N+  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL++KY VHHGVEITDPAIVAA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKEKYAVHHGVEITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA+++++EIDSKPE +D+LERR+IQLKI+ E +K+E DE+S++
Sbjct: 380 YITDRQLPDKAIDLMDEAASRLRMEIDSKPEELDRLERRVIQLKIQREMLKKEKDEASRQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+ LE ++++L +IWK EK  ++ + +IKE++E+ +L++  A R+ D+  +S
Sbjct: 440 RLADLENDIDGLEREFSDLNEIWKSEKAALQGATKIKEQVEQAKLELEAAQRRQDFAKMS 499

Query: 314 KLKYGELNKLERIL---KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSK 370
           +++YG L +LE+ L   +E   KD         F L++ +V  EEIAE+VSR TGIPV+K
Sbjct: 500 EIQYGLLPQLEKQLAAAQEAEHKD---------FKLVQDRVTDEEIAEVVSRWTGIPVNK 550

Query: 371 IVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVG 430
           +++ ER+KLL +E +L  RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVG
Sbjct: 551 MLEGERDKLLRMEEVLHNRVVGQEEAIKVVSDAVRRSRAGLSDPNRPAGSFLFLGPTGVG 610

Query: 431 KTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKP 490
           KTELCK+L+  +F++ +++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+P
Sbjct: 611 KTELCKSLAEFLFDSADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRP 670

Query: 491 YSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK 550
           YSLILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I++M  
Sbjct: 671 YSLILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQDMSA 730

Query: 551 GDKE----IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLL 606
            D       +K AVM  V+ +FRPEFINR+DDI+VF  L+++ I  IA IQ+  L+ +L 
Sbjct: 731 DDSPEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARIQMRGLEKRLA 790

Query: 607 KMNMDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
           +  + L +S AA   + N+GFD +YGAR +   K+++   L     ++P A  I  G  +
Sbjct: 791 ERGLKLAVSDAAFDLLGNVGFDPVYGARPL---KRAIQSQL-----ENPLAQQILSGAFV 842

Query: 667 N 667
           N
Sbjct: 843 N 843


>gi|148545915|ref|YP_001266017.1| ATPase [Pseudomonas putida F1]
 gi|148509973|gb|ABQ76833.1| ATPase AAA-2 domain protein [Pseudomonas putida F1]
          Length = 854

 Score =  805 bits (2080), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/621 (61%), Positives = 509/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQFIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLTEEIERLEREYSDLEEIWASEKAEVQGSAQIQQKIEQARQELETARRKGDLSRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPV+K+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL +RV+GQ EA++AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLKMEELLHQRVIGQSEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 VLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID+++VF  L R+ I  I  IQL  L+++LL+  + L 
Sbjct: 733 EAQRAAVMDAVGAHFRPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLS 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLIAVGYDPVYGAR 813


>gi|395447027|ref|YP_006387280.1| ATPase [Pseudomonas putida ND6]
 gi|388561024|gb|AFK70165.1| ATPase [Pseudomonas putida ND6]
          Length = 831

 Score =  805 bits (2080), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/621 (61%), Positives = 509/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 177 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERL 236

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 237 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEY 296

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 297 RQFIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 356

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KK
Sbjct: 357 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKK 416

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 417 RLEKLTEEIERLEREYSDLEEIWASEKAEVQGSAQIQQKIEQARQELETARRKGDLSRMA 476

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPV+K+++
Sbjct: 477 ELQYGVIPDLERSLQMVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLE 530

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL +RV+GQ EA++AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 531 GEREKLLKMEELLHQRVIGQSEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 590

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 591 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 650

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 651 VLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 709

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID+++VF  L R+ I  I  IQL  L+++LL+  + L 
Sbjct: 710 EAQRAAVMDAVGAHFRPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLS 769

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 770 LSPEALDKLIAVGYDPVYGAR 790


>gi|153215108|ref|ZP_01949815.1| clpB protein [Vibrio cholerae 1587]
 gi|153826762|ref|ZP_01979429.1| clpB protein [Vibrio cholerae MZO-2]
 gi|229530515|ref|ZP_04419903.1| ClpB protein [Vibrio cholerae 12129(1)]
 gi|254224985|ref|ZP_04918599.1| clpB protein [Vibrio cholerae V51]
 gi|254291987|ref|ZP_04962767.1| clpB protein [Vibrio cholerae AM-19226]
 gi|297580832|ref|ZP_06942758.1| chaperone clpB [Vibrio cholerae RC385]
 gi|417819563|ref|ZP_12466179.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE39]
 gi|417823828|ref|ZP_12470420.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE48]
 gi|419835628|ref|ZP_14359073.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-46B1]
 gi|421350540|ref|ZP_15800906.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-25]
 gi|422306203|ref|ZP_16393387.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae CP1035(8)]
 gi|423733990|ref|ZP_17707206.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-41B1]
 gi|423947665|ref|ZP_17733624.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HE-40]
 gi|423976935|ref|ZP_17737172.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HE-46]
 gi|424008275|ref|ZP_17751225.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-44C1]
 gi|424589954|ref|ZP_18029401.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1037(10)]
 gi|124114899|gb|EAY33719.1| clpB protein [Vibrio cholerae 1587]
 gi|125622372|gb|EAZ50692.1| clpB protein [Vibrio cholerae V51]
 gi|149739413|gb|EDM53653.1| clpB protein [Vibrio cholerae MZO-2]
 gi|150422126|gb|EDN14093.1| clpB protein [Vibrio cholerae AM-19226]
 gi|229332288|gb|EEN97776.1| ClpB protein [Vibrio cholerae 12129(1)]
 gi|297535248|gb|EFH74083.1| chaperone clpB [Vibrio cholerae RC385]
 gi|340041125|gb|EGR02093.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE39]
 gi|340048457|gb|EGR09379.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE48]
 gi|395954662|gb|EJH65272.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-25]
 gi|408036118|gb|EKG72565.1| ATP-dependent chaperone ClpB [Vibrio cholerae CP1037(10)]
 gi|408627166|gb|EKK99985.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae CP1035(8)]
 gi|408631760|gb|EKL04288.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-41B1]
 gi|408661665|gb|EKL32649.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HE-40]
 gi|408666033|gb|EKL36836.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HE-46]
 gi|408859041|gb|EKL98711.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-46B1]
 gi|408866145|gb|EKM05534.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-44C1]
          Length = 857

 Score =  805 bits (2080), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 505/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++WK EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 440 RLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L+ +L + +  L
Sbjct: 734 YQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL  I+++GFD +YGAR
Sbjct: 794 EVDDEALDLIAHVGFDPVYGAR 815


>gi|258620376|ref|ZP_05715414.1| clpB protein [Vibrio mimicus VM573]
 gi|258587255|gb|EEW11966.1| clpB protein [Vibrio mimicus VM573]
          Length = 857

 Score =  805 bits (2080), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 504/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++WK EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 440 RLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L+ +L + +  L
Sbjct: 734 YQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL  I+ +GFD +YGAR
Sbjct: 794 EVDDDALDLIAQVGFDPVYGAR 815


>gi|229525361|ref|ZP_04414766.1| ClpB protein [Vibrio cholerae bv. albensis VL426]
 gi|229338942|gb|EEO03959.1| ClpB protein [Vibrio cholerae bv. albensis VL426]
          Length = 857

 Score =  805 bits (2080), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/622 (60%), Positives = 505/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++WK EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 440 RLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L+ +L + +  L
Sbjct: 734 YQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL  I++IGFD +YGAR
Sbjct: 794 EVDDEALDLIAHIGFDPVYGAR 815


>gi|153820387|ref|ZP_01973054.1| chaperone ClpB [Vibrio cholerae NCTC 8457]
 gi|126509069|gb|EAZ71663.1| chaperone ClpB [Vibrio cholerae NCTC 8457]
          Length = 697

 Score =  805 bits (2080), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 506/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 40  NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 99

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 100 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 159

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 160 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 219

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 220 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 279

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++WK EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 280 RLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMS 339

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 340 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLE 393

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E++L KRV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 394 AEKEKLLRMEDVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 453

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 454 LCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 513

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E   + D
Sbjct: 514 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLD 573

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L+ +L + +  L
Sbjct: 574 YQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQL 633

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL  I+++GFD +YGAR
Sbjct: 634 EVDDEALDLIAHVGFDPVYGAR 655


>gi|54035866|sp|Q8PHQ4.2|CLPB_XANAC RecName: Full=Chaperone protein ClpB
          Length = 861

 Score =  805 bits (2080), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/627 (60%), Positives = 507/627 (80%), Gaps = 14/627 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S N+  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLSDLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++
Sbjct: 380 YITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+KLE ++ +L ++WK EK  ++ + ++KE+IE  +L++  A R+ D+  +S
Sbjct: 440 RLADLETDIDKLEREFYDLNELWKSEKAALQGTTKVKEQIEHAKLELEAAQRRQDYAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +++YG L +LE        K + L N    + F L++ +V +EEIAE+VSR TGIPV+K+
Sbjct: 500 EIQYGVLPQLE--------KQMALANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKM 551

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ ER+KLL +E+ L  RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVGK
Sbjct: 552 LEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGK 611

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PY
Sbjct: 612 TELCKALADFLFDSTEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPY 671

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           SLILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+   
Sbjct: 672 SLILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGD 731

Query: 552 DKE----IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLK 607
           D       +K AVM  V+ +FRPEFINR+DDI+VF  L++  I SIA IQL  L+ +L +
Sbjct: 732 DSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAE 791

Query: 608 MNMDLKISKAALKKISNIGFDLIYGAR 634
             + L +  AAL+ + ++GFD +YGAR
Sbjct: 792 RGLKLDLDDAALEVLGSVGFDPVYGAR 818


>gi|37678899|ref|NP_933508.1| clpB protein [Vibrio vulnificus YJ016]
 gi|54035791|sp|Q7MNK1.1|CLPB_VIBVY RecName: Full=Chaperone protein ClpB
 gi|37197640|dbj|BAC93479.1| clpB protein [Vibrio vulnificus YJ016]
          Length = 857

 Score =  805 bits (2080), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/622 (60%), Positives = 503/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELSKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+N+ E ++A LE+IW  EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 440 RLRSLNEELNEKEREFAELEEIWNAEKAALSGTQHIKAALEQARMDMEFARRAGDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLLK KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLKNKVTDNEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  V+NAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFAMLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM  V  +FRPEF+NR+D+ +VF  L++ +I SIA IQLN L N++ +    L
Sbjct: 734 YQGIKEQVMEVVTKHFRPEFLNRVDETVVFHPLSQDHIKSIAAIQLNRLANRMEEHGYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S  AL+ I+ +GFD +YGAR
Sbjct: 794 EVSDKALELIAQVGFDPVYGAR 815


>gi|422921936|ref|ZP_16955141.1| ATP-dependent chaperone ClpB [Vibrio cholerae BJG-01]
 gi|341647481|gb|EGS71560.1| ATP-dependent chaperone ClpB [Vibrio cholerae BJG-01]
          Length = 857

 Score =  805 bits (2080), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 505/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++WK EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 440 RLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L+ +L + +  L
Sbjct: 734 YQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL  I+++GFD +YGAR
Sbjct: 794 EVDDEALDLIAHVGFDPVYGAR 815


>gi|390989198|ref|ZP_10259497.1| ATP-dependent chaperone ClpB [Xanthomonas axonopodis pv. punicae
           str. LMG 859]
 gi|372555956|emb|CCF66472.1| ATP-dependent chaperone ClpB [Xanthomonas axonopodis pv. punicae
           str. LMG 859]
          Length = 859

 Score =  805 bits (2080), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/627 (60%), Positives = 507/627 (80%), Gaps = 14/627 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S N+  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 258 KAVLSDLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS R
Sbjct: 318 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++
Sbjct: 378 YITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+KLE ++ +L ++WK EK  ++ + ++KE+IE  +L++  A R+ D+  +S
Sbjct: 438 RLADLETDIDKLEREFYDLNELWKSEKAALQGTTKVKEQIEHAKLELEAAQRRQDYAKMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +++YG L +LE        K + L N    + F L++ +V +EEIAE+VSR TGIPV+K+
Sbjct: 498 EIQYGVLPQLE--------KQMALANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKM 549

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ ER+KLL +E+ L  RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVGK
Sbjct: 550 LEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGK 609

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PY
Sbjct: 610 TELCKALADFLFDSTEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPY 669

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           SLILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+   
Sbjct: 670 SLILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGD 729

Query: 552 DKE----IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLK 607
           D       +K AVM  V+ +FRPEFINR+DDI+VF  L++  I SIA IQL  L+ +L +
Sbjct: 730 DSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAE 789

Query: 608 MNMDLKISKAALKKISNIGFDLIYGAR 634
             + L +  AAL+ + ++GFD +YGAR
Sbjct: 790 RGLKLDLDDAALEVLGSVGFDPVYGAR 816


>gi|456734399|gb|EMF59215.1| ClpB protein [Stenotrophomonas maltophilia EPM1]
          Length = 859

 Score =  805 bits (2079), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/661 (58%), Positives = 521/661 (78%), Gaps = 24/661 (3%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIIN EVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIINDEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ N+  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 258 KGVLNDLAKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL++KY VHHGVEITDPAIVAA+ LS R
Sbjct: 318 RKYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKEKYAVHHGVEITDPAIVAAATLSNR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA+++++EIDSKPE +D+LERR+IQLKI+ E +K+E DE+S++
Sbjct: 378 YITDRQLPDKAIDLMDEAASRLRMEIDSKPEELDRLERRVIQLKIQREMLKKEKDEASRQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+ LE ++++L +IWK EK  ++ + +IKE++E+ +L++  A R+ D+  +S
Sbjct: 438 RLADLENDIDGLEREFSDLNEIWKSEKAALQGATKIKEQVEQAKLELEAAQRRQDFAKMS 497

Query: 314 KLKYGELNKLERIL---KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSK 370
           +++YG L +LE+ L   +E   KD         F L++ +V  EEIAE+VSR TGIPV+K
Sbjct: 498 EIQYGLLPQLEKQLAAAQEAEHKD---------FKLVQDRVTDEEIAEVVSRWTGIPVNK 548

Query: 371 IVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVG 430
           +++ ER+KLL +E +L  RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVG
Sbjct: 549 MLEGERDKLLRMEEVLHNRVVGQEEAIKVVSDAVRRSRAGLSDPNRPAGSFLFLGPTGVG 608

Query: 431 KTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKP 490
           KTELCK+L+  +F++ +++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+P
Sbjct: 609 KTELCKSLAEFLFDSADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRP 668

Query: 491 YSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK 550
           YSLILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I++M  
Sbjct: 669 YSLILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQDMSA 728

Query: 551 GDKE----IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLL 606
            D       +K AVM  V+ +FRPEFINR+DDI+VF  L+++ I  IA IQ+  L+ +L 
Sbjct: 729 DDSPEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARIQMRGLEKRLA 788

Query: 607 KMNMDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
           +  + L +S AA   + N+GFD +YGAR +   K+++   L     ++P A  I  G  +
Sbjct: 789 ERGLKLAVSDAAFDLLGNVGFDPVYGARPL---KRAIQSQL-----ENPLAQQILSGAFV 840

Query: 667 N 667
           N
Sbjct: 841 N 841


>gi|146308654|ref|YP_001189119.1| ATPase [Pseudomonas mendocina ymp]
 gi|145576855|gb|ABP86387.1| ATPase AAA-2 domain protein [Pseudomonas mendocina ymp]
          Length = 854

 Score =  805 bits (2079), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/621 (61%), Positives = 512/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRI+NGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIVNGEVPDGLKDKRLLSLDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKQEGRIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+R
Sbjct: 320 RQFIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL+ ++++I KLE +YA+LE+IWK EK  ++ S QI++ IE+ + ++  A RK D   ++
Sbjct: 440 RLVKLEEDIAKLEKEYADLEEIWKSEKAEVQGSAQIQQRIEQAKTELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  ++  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKSENQLLRNKVTDEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL +RV+GQDEA+ AV+NA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLKMEGLLHQRVIGQDEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L+DE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GDK
Sbjct: 674 VLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQEL-VGDK 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID+++VF  L R+ I  IA IQL  L+ +L +  + L+
Sbjct: 733 EAQRAAVMDAVSSHFRPEFINRIDEVVVFEPLGREQIAGIAEIQLQRLRGRLTERELSLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++  AL K+  +G+D +YGAR
Sbjct: 793 LTPEALDKLIAVGYDPVYGAR 813


>gi|229512401|ref|ZP_04401875.1| ClpB protein [Vibrio cholerae TMA 21]
 gi|229350551|gb|EEO15497.1| ClpB protein [Vibrio cholerae TMA 21]
          Length = 857

 Score =  805 bits (2079), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 505/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++WK EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 440 RLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L+ +L + +  L
Sbjct: 734 YQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL  I+++GFD +YGAR
Sbjct: 794 EVDDEALDLIAHVGFDPVYGAR 815


>gi|261212183|ref|ZP_05926469.1| ClpB protein [Vibrio sp. RC341]
 gi|260838791|gb|EEX65442.1| ClpB protein [Vibrio sp. RC341]
          Length = 857

 Score =  805 bits (2079), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 505/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++WK EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 440 RLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L+ +L + +  L
Sbjct: 734 YQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL  I+++GFD +YGAR
Sbjct: 794 EVDDEALDLIAHVGFDPVYGAR 815


>gi|21243921|ref|NP_643503.1| ATP-dependent Clp protease subunit [Xanthomonas axonopodis pv.
           citri str. 306]
 gi|21109529|gb|AAM38039.1| ATP-dependent Clp protease subunit [Xanthomonas axonopodis pv.
           citri str. 306]
          Length = 871

 Score =  805 bits (2079), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/627 (60%), Positives = 507/627 (80%), Gaps = 14/627 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 210 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 269

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S N+  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 270 KAVLSDLSKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 329

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS R
Sbjct: 330 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 389

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++
Sbjct: 390 YITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQ 449

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+KLE ++ +L ++WK EK  ++ + ++KE+IE  +L++  A R+ D+  +S
Sbjct: 450 RLADLETDIDKLEREFYDLNELWKSEKAALQGTTKVKEQIEHAKLELEAAQRRQDYAKMS 509

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNA--NKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +++YG L +LE        K + L N    + F L++ +V +EEIAE+VSR TGIPV+K+
Sbjct: 510 EIQYGVLPQLE--------KQMALANEVEHHDFKLVQDRVTAEEIAEVVSRWTGIPVNKM 561

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ ER+KLL +E+ L  RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVGK
Sbjct: 562 LEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGK 621

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PY
Sbjct: 622 TELCKALADFLFDSTEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPY 681

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           SLILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+   
Sbjct: 682 SLILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGD 741

Query: 552 DKE----IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLK 607
           D       +K AVM  V+ +FRPEFINR+DDI+VF  L++  I SIA IQL  L+ +L +
Sbjct: 742 DSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLAE 801

Query: 608 MNMDLKISKAALKKISNIGFDLIYGAR 634
             + L +  AAL+ + ++GFD +YGAR
Sbjct: 802 RGLKLDLDDAALEVLGSVGFDPVYGAR 828


>gi|344208582|ref|YP_004793723.1| ATP-dependent chaperone ClpB [Stenotrophomonas maltophilia JV3]
 gi|343779944|gb|AEM52497.1| ATP-dependent chaperone ClpB [Stenotrophomonas maltophilia JV3]
          Length = 861

 Score =  805 bits (2079), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/661 (58%), Positives = 522/661 (78%), Gaps = 24/661 (3%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIIN EVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINDEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ ++  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKSEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL++KY VHHGVEITDPAIVAA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKEKYAVHHGVEITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA+++++EIDSKPE +D+LERR+IQLKI+ E +K+E DE+S++
Sbjct: 380 YITDRQLPDKAIDLMDEAASRLRMEIDSKPEELDRLERRVIQLKIQREMLKKEKDEASRQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++K+I+ LE ++++L +IWK EK  ++ + +IKE++E+ +L++  A R+ D+  +S
Sbjct: 440 RLADLEKDIDALEREFSDLNEIWKSEKAALQGATKIKEQVEQAKLELESAQRRQDFAKMS 499

Query: 314 KLKYGELNKLERIL---KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSK 370
           +++YG L +LE+ L   +E   KD         F L++ +V  EEIAE+VSR TGIPV+K
Sbjct: 500 EIQYGLLPQLEKQLAAAQEAEHKD---------FKLVQDRVTDEEIAEVVSRWTGIPVNK 550

Query: 371 IVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVG 430
           +++ ER+KLL +E +L  RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVG
Sbjct: 551 MLEGERDKLLRMEEVLHNRVVGQEEAIRVVSDAVRRSRAGLSDPNRPAGSFLFLGPTGVG 610

Query: 431 KTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKP 490
           KTELCK+L+  +F++ +++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+P
Sbjct: 611 KTELCKSLAEFLFDSADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRP 670

Query: 491 YSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK 550
           YSLILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I++M  
Sbjct: 671 YSLILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQDMSA 730

Query: 551 GDKE----IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLL 606
            D       +K AVM  V+ +FRPEFINR+DDI+VF  L+++ I  IA IQ+  L+ +L 
Sbjct: 731 DDSPEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARIQMRGLEKRLA 790

Query: 607 KMNMDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
           +  + L +S AA   + N+GFD +YGAR +   K+++   L     ++P A  I  G  +
Sbjct: 791 ERGLKLMVSDAAFDLLGNVGFDPVYGARPL---KRAIQAQL-----ENPLAQKILSGAFV 842

Query: 667 N 667
           N
Sbjct: 843 N 843


>gi|262401592|ref|ZP_06078158.1| ClpB protein [Vibrio sp. RC586]
 gi|262352009|gb|EEZ01139.1| ClpB protein [Vibrio sp. RC586]
          Length = 857

 Score =  805 bits (2079), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 505/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++WK EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 440 RLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSGRIQENFARLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L+ +L + +  L
Sbjct: 734 YQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL  I+++GFD +YGAR
Sbjct: 794 EVDDEALDLIAHVGFDPVYGAR 815


>gi|429887941|ref|ZP_19369446.1| ClpB protein [Vibrio cholerae PS15]
 gi|429225109|gb|EKY31395.1| ClpB protein [Vibrio cholerae PS15]
          Length = 857

 Score =  805 bits (2079), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 505/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++WK EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 440 RLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L+ +L + +  L
Sbjct: 734 YQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL  I+++GFD +YGAR
Sbjct: 794 EVDDEALDLIAHVGFDPVYGAR 815


>gi|424809681|ref|ZP_18235058.1| clpB protein [Vibrio mimicus SX-4]
 gi|342323169|gb|EGU18955.1| clpB protein [Vibrio mimicus SX-4]
          Length = 823

 Score =  805 bits (2079), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 504/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 166 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 225

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 226 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 285

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 286 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 345

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 346 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 405

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++WK EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 406 RLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLSRMS 465

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 466 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLE 519

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 520 AEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 579

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 580 LCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 639

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E   + D
Sbjct: 640 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLD 699

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L+ +L + +  L
Sbjct: 700 YQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQL 759

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL  I+ +GFD +YGAR
Sbjct: 760 EVDDDALDLIAQVGFDPVYGAR 781


>gi|383318057|ref|YP_005378899.1| ATP-dependent chaperone ClpB [Frateuria aurantia DSM 6220]
 gi|379045161|gb|AFC87217.1| ATP-dependent chaperone ClpB [Frateuria aurantia DSM 6220]
          Length = 860

 Score =  805 bits (2079), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/625 (59%), Positives = 502/625 (80%), Gaps = 11/625 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+ GEVP  L  +++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVKGEVPEGLRDRRVLALDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTLNEY
Sbjct: 260 KAVLNDLAKQEGRVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS R
Sbjct: 320 RQYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +++E DE S++
Sbjct: 380 YIPDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLRKEKDEESRR 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+  E  +++L ++WK EK  ++ + ++KE+IE  RL +  A R+ D+  +S
Sbjct: 440 RLADLESDIDTEERVFSDLNEVWKSEKAALQGTTKVKEQIEAARLALETAQRQQDYARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG L +LE+ L      + Q       F L++ +V +EEIAE+V+R TGIPV+K+++
Sbjct: 500 EIQYGTLPELEKQLAAAQAAETQ------DFKLVQDRVTAEEIAEVVARWTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E +L +RVVGQDEA+ AVS+AIRR+R+GLSD  RPYGSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLHMEQVLHERVVGQDEAVRAVSDAIRRARAGLSDPNRPYGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ +++++RIDMSEF+EKHS+SRLIGAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALADFLFDTQDAMVRIDMSEFMEKHSVSRLIGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I+E + GD 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSSLIQE-QAGDS 732

Query: 554 EI----IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
           E     +K +V+  V+ +FRPEFINR+D+++VFR L    I +IA IQL  L+ +L +  
Sbjct: 733 EADYVQMKASVLGVVQAHFRPEFINRLDELVVFRPLQSAQIRAIARIQLAGLEQRLAERQ 792

Query: 610 MDLKISKAALKKISNIGFDLIYGAR 634
           + L+++  AL+ +   GFD +YGAR
Sbjct: 793 LKLEVNDEALQLLGQAGFDPVYGAR 817


>gi|334143474|ref|YP_004536630.1| ATP-dependent chaperone ClpB [Thioalkalimicrobium cyclicum ALM1]
 gi|333964385|gb|AEG31151.1| ATP-dependent chaperone ClpB [Thioalkalimicrobium cyclicum ALM1]
          Length = 853

 Score =  805 bits (2079), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/622 (61%), Positives = 505/622 (81%), Gaps = 4/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 194 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRNKRVLSLDLGALLAGAKYRGEFEERL 253

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK++S N+  +I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHCIGATTLNEY
Sbjct: 254 KAVLKDLSKNEGQVILFIDEIHTMVGAGKAEGAMDAGNMLKPTLARGELHCIGATTLNEY 313

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R  IEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV ITDPAIVAA+ LS R
Sbjct: 314 RDNIEKDAALERRFQKVLVDEPTEEDTIAILRGLKERYEVHHGVAITDPAIVAAARLSQR 373

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE MDKL+RRLIQLK+E  A+K+E D++SKK
Sbjct: 374 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEEMDKLDRRLIQLKMEQVALKKEKDDASKK 433

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++K +I +LE +Y++ E++WK +K  ++ +QQ KE ++K R ++  A R+ +   +S
Sbjct: 434 RLEILKDQIKELEKQYSDFEEVWKKDKAALQGAQQYKEALDKARTEMEAARREGNLARMS 493

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE  +K     + +     +   LL+ KV  +EIAE+VSR TGIPVS++++
Sbjct: 494 ELQYGVIPDLEAKIKAAEASEAE---GDDHMHLLRNKVTEDEIAEVVSRWTGIPVSRMME 550

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  +VVGQDEA+ AVS+AIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 551 GEREKLLRMEESLSAKVVGQDEAVKAVSDAIRRSRAGLSDPNKPNGSFLFLGPTGVGKTE 610

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K+L+  +F+++++I+R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+
Sbjct: 611 LTKSLADFLFDSQDAIVRLDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEAVRRKPYSV 670

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRTI+FRNT+IVMTSNLGS  I+E+  + +
Sbjct: 671 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTIDFRNTVIVMTSNLGSQIIQELAGEAN 730

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K AVM+ V  +FRPEF+NRIDDI+VF  L +  I +I +IQL  L+++L+ +++ L
Sbjct: 731 YDAMKSAVMDVVGGHFRPEFVNRIDDIVVFHPLGKAQIRAITDIQLQRLRDRLVDLDIKL 790

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +S  AL  +   GFD +YGAR
Sbjct: 791 DVSIPALDVMGEAGFDPVYGAR 812


>gi|258624749|ref|ZP_05719683.1| clpB protein [Vibrio mimicus VM603]
 gi|258583036|gb|EEW07851.1| clpB protein [Vibrio mimicus VM603]
          Length = 857

 Score =  805 bits (2079), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 504/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++WK EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 440 RLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L+ +L + +  L
Sbjct: 734 YQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL  I+ +GFD +YGAR
Sbjct: 794 EVDDDALDLIAQVGFDPVYGAR 815


>gi|262163882|ref|ZP_06031621.1| ClpB protein [Vibrio mimicus VM223]
 gi|262027410|gb|EEY46076.1| ClpB protein [Vibrio mimicus VM223]
          Length = 823

 Score =  805 bits (2079), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/622 (60%), Positives = 504/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 166 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 225

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 226 KSVLNELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 285

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 286 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 345

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 346 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 405

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++WK EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 406 RLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLSRMS 465

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 466 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLE 519

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 520 AEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 579

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 580 LCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 639

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E   + D
Sbjct: 640 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLD 699

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L+ +L + +  L
Sbjct: 700 YQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQL 759

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL  I+ +GFD +YGAR
Sbjct: 760 EVDDDALDLIAQVGFDPVYGAR 781


>gi|421342009|ref|ZP_15792416.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-43B1]
 gi|395945512|gb|EJH56177.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-43B1]
          Length = 823

 Score =  805 bits (2078), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 505/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 166 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 225

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 226 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 285

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 286 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 345

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 346 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 405

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++WK EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 406 RLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMS 465

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 466 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLE 519

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 520 AEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 579

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 580 LCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 639

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E   + D
Sbjct: 640 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLD 699

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L+ +L + +  L
Sbjct: 700 YQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQL 759

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL  I+++GFD +YGAR
Sbjct: 760 EVDDEALDLIAHVGFDPVYGAR 781


>gi|77461055|ref|YP_350562.1| chaperone clpB [Pseudomonas fluorescens Pf0-1]
 gi|77385058|gb|ABA76571.1| chaperone [Pseudomonas fluorescens Pf0-1]
          Length = 854

 Score =  805 bits (2078), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/621 (61%), Positives = 512/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KALLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDDAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI++ E +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIDRHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  ++  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KL+ +E+LL +RV+GQDEA+ AV+NA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLMKMESLLHQRVIGQDEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSMQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+N+L +  + L+
Sbjct: 733 EAQRAAVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRNRLAERELKLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+ K+  +G+D +YGAR
Sbjct: 793 LSPEAMDKLIAVGYDPVYGAR 813


>gi|417843784|ref|ZP_12489850.1| Chaperone protein ClpB [Haemophilus haemolyticus M21127]
 gi|341948532|gb|EGT75158.1| Chaperone protein ClpB [Haemophilus haemolyticus M21127]
          Length = 856

 Score =  805 bits (2078), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/621 (60%), Positives = 503/621 (80%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+   E +YA LE++WK EK  +  SQ IK+E++  + ++ +A R  D   +S
Sbjct: 440 RLEMLEKELADKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L++             + TLL+ +V  EEIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPTLEKQLEQAE------TGEGKEMTLLRYRVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEDELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  ++   
Sbjct: 674 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKEESY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IANIQL  L  ++     +L 
Sbjct: 734 SEMKALVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIANIQLERLAKRMETRGYELV 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D IYGAR
Sbjct: 794 FTDALLDFIGEVGYDPIYGAR 814


>gi|424032097|ref|ZP_17771518.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HENC-01]
 gi|408876509|gb|EKM15626.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HENC-01]
          Length = 857

 Score =  805 bits (2078), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/622 (60%), Positives = 506/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+N+ E +YA LE++W  EK  +  +Q IK E+E+ R+ ++ A R  D   +S
Sbjct: 440 RLDVLNDELNEKEREYAELEEVWNAEKAALSGTQHIKGELEQARMDMDFARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E++L KRV+GQ EA+  VSNAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEDVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFATLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L  +L +     
Sbjct: 734 YQGIKNEVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQF 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S  AL  I+ +GFD +YGAR
Sbjct: 794 EVSDKALDLIAQVGFDPVYGAR 815


>gi|147675005|ref|YP_001216203.1| clpB protein [Vibrio cholerae O395]
 gi|227117086|ref|YP_002818982.1| clpB protein [Vibrio cholerae O395]
 gi|262170007|ref|ZP_06037697.1| ClpB protein [Vibrio cholerae RC27]
 gi|146316888|gb|ABQ21427.1| clpB protein [Vibrio cholerae O395]
 gi|227012536|gb|ACP08746.1| clpB protein [Vibrio cholerae O395]
 gi|262021741|gb|EEY40452.1| ClpB protein [Vibrio cholerae RC27]
          Length = 857

 Score =  805 bits (2078), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 505/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++WK EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 440 RLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L+ +L + +  L
Sbjct: 734 YQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL  I+++GFD +YGAR
Sbjct: 794 EVDDEALDLIAHVGFDPVYGAR 815


>gi|262172214|ref|ZP_06039892.1| ClpB protein [Vibrio mimicus MB-451]
 gi|449144154|ref|ZP_21774971.1| chaperone ClpB [Vibrio mimicus CAIM 602]
 gi|261893290|gb|EEY39276.1| ClpB protein [Vibrio mimicus MB-451]
 gi|449080254|gb|EMB51171.1| chaperone ClpB [Vibrio mimicus CAIM 602]
          Length = 857

 Score =  805 bits (2078), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 504/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++WK EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 440 RLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L+ +L + +  L
Sbjct: 734 YQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL  I+ +GFD +YGAR
Sbjct: 794 EVDDDALDLIAQVGFDPVYGAR 815


>gi|27363946|ref|NP_759474.1| ATP-dependent chaperone ClpB [Vibrio vulnificus CMCP6]
 gi|54035847|sp|Q8DEV2.1|CLPB_VIBVU RecName: Full=Chaperone protein ClpB
 gi|27360063|gb|AAO09001.1| ATP-dependent chaperone ClpB [Vibrio vulnificus CMCP6]
          Length = 857

 Score =  805 bits (2078), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/622 (60%), Positives = 502/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELSKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+N+ E ++A LE+IW  EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 440 RLRSLNEELNEKEREFAELEEIWNAEKAALSGTQHIKAALEQARMDMEFARRAGDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLLK KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLKNKVTDNEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  V+NAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFAMLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM  V  +FRPEF+NR+D+ +VF  L + +I SIA IQLN L N++ +    L
Sbjct: 734 YQGIKEQVMEVVTKHFRPEFLNRVDETVVFHPLGQDHIKSIAAIQLNRLANRMEEHGYPL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S  AL+ I+ +GFD +YGAR
Sbjct: 794 EVSDKALELIAQVGFDPVYGAR 815


>gi|408822107|ref|ZP_11206997.1| ATP-dependent chaperone ClpB [Pseudomonas geniculata N1]
          Length = 861

 Score =  804 bits (2077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/661 (58%), Positives = 521/661 (78%), Gaps = 24/661 (3%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIIN EVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINDEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ N+  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNDLAKNEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL++KY VHHGVEITDPAIVAA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKEKYAVHHGVEITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA+++++EIDSKPE +D+LERR+IQLKI+ E +K+E DE+S++
Sbjct: 380 YITDRQLPDKAIDLMDEAASRLRMEIDSKPEELDRLERRVIQLKIQREMLKKEKDEASRQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+ LE ++++L +IWK EK  ++ + +IKE++E+ +L++  A R+ D+  +S
Sbjct: 440 RLADLENDIDGLEREFSDLNEIWKSEKAALQGATKIKEQVEQAKLELEAAQRRQDFAKMS 499

Query: 314 KLKYGELNKLERIL---KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSK 370
           +++YG L +LE+ L   +E   KD         F L++ +V  EEIAE+VSR TGIPV+K
Sbjct: 500 EIQYGLLPQLEKQLAAAQEAEHKD---------FKLVQDRVTDEEIAEVVSRWTGIPVNK 550

Query: 371 IVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVG 430
           +++ ER+KLL +E +L  RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVG
Sbjct: 551 MLEGERDKLLRMEEVLHNRVVGQEEAIKVVSDAVRRSRAGLSDPNRPAGSFLFLGPTGVG 610

Query: 431 KTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKP 490
           KTELCK+L+  +F++ +++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+P
Sbjct: 611 KTELCKSLAEFLFDSADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRP 670

Query: 491 YSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK 550
           YSLILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I++M  
Sbjct: 671 YSLILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQDMST 730

Query: 551 GDKE----IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLL 606
            D       +K AVM  V+ +FRPEFINR+DDI+VF  L+++ I  IA IQ+  L+ +L 
Sbjct: 731 DDSPEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARIQMRGLEKRLA 790

Query: 607 KMNMDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
           +  + L +S AA   + N+GFD +YGAR +   K+++   L     ++P A  I  G  +
Sbjct: 791 ERGLKLMVSDAAFDLLGNVGFDPVYGARPL---KRAIQAQL-----ENPLAQKILSGAFV 842

Query: 667 N 667
           N
Sbjct: 843 N 843


>gi|419829326|ref|ZP_14352814.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-1A2]
 gi|419832128|ref|ZP_14355593.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-61A2]
 gi|423849446|ref|ZP_17719228.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-59A1]
 gi|423879099|ref|ZP_17722834.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-60A1]
 gi|408621960|gb|EKK94952.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-1A2]
 gi|408643807|gb|EKL15524.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-60A1]
 gi|408644845|gb|EKL16519.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-59A1]
 gi|408652029|gb|EKL23268.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-61A2]
          Length = 823

 Score =  804 bits (2077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/622 (60%), Positives = 505/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 166 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 225

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 226 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 285

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 286 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 345

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 346 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 405

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++WK EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 406 RLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMS 465

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 466 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLE 519

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 520 AEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 579

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE +RRKPYS+
Sbjct: 580 LCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAIRRKPYSV 639

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E   + D
Sbjct: 640 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLD 699

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L+ +L + +  L
Sbjct: 700 YQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQL 759

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL  I+++GFD +YGAR
Sbjct: 760 EVDDEALDLIAHVGFDPVYGAR 781


>gi|167031687|ref|YP_001666918.1| ATP-dependent chaperone ClpB [Pseudomonas putida GB-1]
 gi|166858175|gb|ABY96582.1| ATP-dependent chaperone ClpB [Pseudomonas putida GB-1]
          Length = 854

 Score =  804 bits (2077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/621 (61%), Positives = 509/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KGLLNELSKQEGQIILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQFIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLTEEIERLEREYSDLEEIWASEKAEVQGSAQIQQKIEQARQELETARRKGDLSRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPV+K+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL +RV+GQ EA++AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLKMEALLHQRVIGQGEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 VLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID+++VF  L R+ I  I  IQL  L+++LL+  + L 
Sbjct: 733 EAQRAAVMDAVGAHFRPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLS 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPDALDKLIAVGYDPVYGAR 813


>gi|424658578|ref|ZP_18095835.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-16]
 gi|408054712|gb|EKG89675.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-16]
          Length = 823

 Score =  804 bits (2077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 505/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 166 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 225

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 226 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 285

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 286 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 345

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 346 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 405

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++WK EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 406 RLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMS 465

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 466 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLE 519

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 520 AEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 579

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 580 LCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 639

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E   + D
Sbjct: 640 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLD 699

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L+ +L + +  L
Sbjct: 700 YQGIKEQVMDIVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYPL 759

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL  I+++GFD +YGAR
Sbjct: 760 EVDDEALDLIAHVGFDPVYGAR 781


>gi|422916499|ref|ZP_16950837.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-02A1]
 gi|423817409|ref|ZP_17715440.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-55C2]
 gi|423996921|ref|ZP_17740184.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-02C1]
 gi|424015624|ref|ZP_17755471.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-55B2]
 gi|424020734|ref|ZP_17760514.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-59B1]
 gi|424628600|ref|ZP_18066905.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-51A1]
 gi|424632634|ref|ZP_18070750.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-52A1]
 gi|443528620|ref|ZP_21094654.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-78A1]
 gi|341640132|gb|EGS64727.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-02A1]
 gi|408020657|gb|EKG57947.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-52A1]
 gi|408058575|gb|EKG93367.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-51A1]
 gi|408636632|gb|EKL08769.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-55C2]
 gi|408854299|gb|EKL94063.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-02C1]
 gi|408861789|gb|EKM01356.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-55B2]
 gi|408866599|gb|EKM05979.1| ATP-dependent chaperone protein ClpB [Vibrio cholerae HC-59B1]
 gi|443453194|gb|ELT17027.1| ATP-dependent chaperone ClpB [Vibrio cholerae HC-78A1]
          Length = 857

 Score =  804 bits (2077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/622 (60%), Positives = 505/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++WK EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 440 RLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE +RRKPYS+
Sbjct: 614 LCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAIRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L+ +L + +  L
Sbjct: 734 YQGIKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL  I+++GFD +YGAR
Sbjct: 794 EVDDEALDLIAHVGFDPVYGAR 815


>gi|350530312|ref|ZP_08909253.1| hypothetical protein VrotD_04277 [Vibrio rotiferianus DAT722]
          Length = 857

 Score =  804 bits (2077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/622 (60%), Positives = 507/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+N+ E +YA LE++W  EK  +  +Q IK E+E+ R+ ++ A R  D   +S
Sbjct: 440 RLDVLNEELNEKEREYAELEEVWNAEKAALSGTQHIKGELEQARMDMDFARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIA+++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIADVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  VSNAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEEVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFATLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L  +L +    L
Sbjct: 734 YQGIKNEVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S  AL  I+ +GFD +YGAR
Sbjct: 794 EVSDKALDLIAQVGFDPVYGAR 815


>gi|297171552|gb|ADI22550.1| hypothetical protein [uncultured Oceanospirillales bacterium
           HF0500_09M11]
          Length = 861

 Score =  804 bits (2077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/623 (62%), Positives = 506/623 (81%), Gaps = 6/623 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKDKRVLALDMAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+F+DELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KAVLNELSKQEGRIILFVDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+ V++P +E+TI+ILRGL+++YEVHHGV+ITD AI+AA+ LS+R
Sbjct: 320 RQHIEKDAALERRFQKVQVDQPSVEDTIAILRGLKERYEVHHGVDITDGAIIAAARLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDS PE MD+L+RRLIQLK+E EA+++E DE+SKK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSMPEEMDRLDRRLIQLKMEREALRKEDDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI  LE +YA+LE+IW  EK  ++ +QQ K E+E+ R+ + +A R  D   +S
Sbjct: 440 RLDKLQDEIAALEKEYADLEEIWNAEKAALQGAQQYKAELEQARVDMEQARRAGDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFT-LLKTKVGSEEIAEIVSRTTGIPVSKIV 372
           +L+YG +  LE+    K Q   +   +A   T LL+ KV  EE+AE+VS+ TGIPVSK++
Sbjct: 500 ELQYGVIPDLEK----KVQTAQEAEESAQVETKLLRNKVTEEEVAEVVSKWTGIPVSKML 555

Query: 373 QVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKT 432
           + ER+KLL +E  L  RVVGQDEA++AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKT
Sbjct: 556 EGERDKLLRMEEALHARVVGQDEAVTAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKT 615

Query: 433 ELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYS 492
           ELCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS
Sbjct: 616 ELCKALAGFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYS 675

Query: 493 LILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KG 551
           ++LLDE+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT++VMTSNLGSD I+ M   G
Sbjct: 676 VLLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQRMAGDG 735

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D + +K AVM  V  +FRPEFINR+D+ +VF  L R  +  IA IQL+ L+ +L++ +M 
Sbjct: 736 DYDAMKGAVMEVVGQHFRPEFINRVDETVVFHPLARGQLKGIAAIQLDYLRQRLVERDMG 795

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L++S  AL+K+   GFD +YGAR
Sbjct: 796 LRLSDKALEKLVEAGFDPVYGAR 818


>gi|421524703|ref|ZP_15971324.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
           putida LS46]
 gi|402751166|gb|EJX11679.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
           putida LS46]
          Length = 854

 Score =  804 bits (2077), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/621 (61%), Positives = 509/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQFIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLTEEIERLEREYSDLEEIWASEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPV+K+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKTENQLLRNKVTEEEIAEVVSKWTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL +RV+GQ EA++AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLKMEELLHQRVIGQSEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 VLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID+++VF  L R+ I  I  IQL  L+++LL+  + L 
Sbjct: 733 EAQRAAVMDAVGAHFRPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLS 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLIAVGYDPVYGAR 813


>gi|422909223|ref|ZP_16943874.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-09]
 gi|341635611|gb|EGS60321.1| ATP-dependent chaperone ClpB [Vibrio cholerae HE-09]
          Length = 857

 Score =  804 bits (2076), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/622 (60%), Positives = 505/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E  YA LE++WK EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 440 RLAILNEELQEKERDYAELEEVWKAEKAALSGTQHIKAALEQARMDLEVARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDAEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEEVLHKRVIGQKEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++R+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFLFDSEDAMVRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFARLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L+ +L + +  L
Sbjct: 734 YQGIKEQVMDIVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLARLRQRLAERDYPL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL  I+++GFD +YGAR
Sbjct: 794 EVDDEALDLIAHVGFDPVYGAR 815


>gi|389793058|ref|ZP_10196234.1| ATP-dependent chaperone ClpB [Rhodanobacter fulvus Jip2]
 gi|388435195|gb|EIL92112.1| ATP-dependent chaperone ClpB [Rhodanobacter fulvus Jip2]
          Length = 865

 Score =  804 bits (2076), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/627 (60%), Positives = 504/627 (80%), Gaps = 12/627 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRII GEVP  L  +++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIIKGEVPEGLRDRRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLSDLSKQEGRVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS+R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D  SK+
Sbjct: 380 YIADRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDSESKQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I KLE ++++L +IWK EK  ++ + ++KE+IE+   ++  A R  D+  +S
Sbjct: 440 RLADLETDIEKLEREFSDLNEIWKSEKAALQGTTKVKEQIEQASQELEAARRAQDYARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG+L  LE+ L      + Q       F L++TKV ++EIAE+V+R TGIPVSK+++
Sbjct: 500 EIQYGKLPALEKQLAVAQAAETQ------DFKLVQTKVTADEIAEVVARWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RVVGQDEA+ AV++AIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLKMEDELHQRVVGQDEAVHAVADAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+  ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALAEFMFDTTDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--G 551
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I++  +  G
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQMIQDASESSG 733

Query: 552 DKE----IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLK 607
           D E     +K +VM  V+ +FRPEFINR+D+I+VFR L++  I +IA IQL  L+ +L +
Sbjct: 734 DAEEQYTQMKASVMGVVQAHFRPEFINRLDEIVVFRPLDKTQIRAIARIQLQYLEKRLAE 793

Query: 608 MNMDLKISKAALKKISNIGFDLIYGAR 634
             + + +S  AL  + N+GFD +YGAR
Sbjct: 794 RQLKMDVSDEALTLLGNVGFDPVYGAR 820


>gi|397685796|ref|YP_006523115.1| ClpB protein [Pseudomonas stutzeri DSM 10701]
 gi|395807352|gb|AFN76757.1| ClpB protein [Pseudomonas stutzeri DSM 10701]
          Length = 854

 Score =  804 bits (2076), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/621 (61%), Positives = 510/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLSLDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP LSRGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALSRGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHGVSITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEALDRLDRRLIQLKIEREALKKEDDEATMK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++E+ KLE +YA+LE+IWK EK  ++ S QI+++IE+ + ++  A RK D   ++
Sbjct: 440 RLAKLEEEVVKLEKEYADLEEIWKSEKAEVQGSAQIQQKIEQAKAELEAARRKGDLARMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +   ER L+   Q      +  ++  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDFERSLQMVDQ------HGKSENQLLRNKVTDEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+LL +RV+GQ EA+ +V+NA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLKMEDLLHQRVIGQHEAVVSVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD 
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSTQIQEL-VGDP 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           +  + AVM+ V  +FRPEFINRID+++VF  L ++ I  IA IQL  L+ +L +  + L+
Sbjct: 733 DAQRAAVMDAVSSHFRPEFINRIDEVVVFDPLAKEQIAGIAQIQLERLRQRLAERELSLQ 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+ K+  +G+D +YGAR
Sbjct: 793 LSDEAMDKLVAVGYDPVYGAR 813


>gi|330504856|ref|YP_004381725.1| ATPase [Pseudomonas mendocina NK-01]
 gi|328919142|gb|AEB59973.1| ATPase [Pseudomonas mendocina NK-01]
          Length = 854

 Score =  804 bits (2076), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/621 (61%), Positives = 513/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRI+NGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIVNGEVPDGLKDKRLLSLDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+   +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELGKQEGRIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+R
Sbjct: 320 RQFIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL+ ++++I KLE +YA+LE+IWK EK  ++ S QI+++IE+ + ++  A RK D   ++
Sbjct: 440 RLVKLEEDIAKLEKEYADLEEIWKSEKAEVQGSAQIQQKIEQAKTELESARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  ++  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKSENQLLRNKVTDEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL +RV+GQDEA+ AV+NA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLKMEGLLHQRVIGQDEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L+DE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GDK
Sbjct: 674 VLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQEL-VGDK 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID+++VF  L R+ I  IA IQL  L+ +L + ++ L+
Sbjct: 733 EAQRAAVMDAVGSHFRPEFINRIDEVVVFEPLGREQIAGIAEIQLQRLRGRLAERDLTLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++  AL K+  +G+D +YGAR
Sbjct: 793 LTPEALDKLIAVGYDPVYGAR 813


>gi|165918374|ref|ZP_02218460.1| ATP-dependent chaperone ClpB [Coxiella burnetii Q321]
 gi|165917880|gb|EDR36484.1| ATP-dependent chaperone ClpB [Coxiella burnetii Q321]
          Length = 859

 Score =  804 bits (2076), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/662 (60%), Positives = 532/662 (80%), Gaps = 12/662 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKQKRLLALDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+I+  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLKDIAKEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LVEEP  E+ I+ILRGL+++YEVHHGVEITDPAI+AA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVLVEEPSTEDAIAILRGLKERYEVHHGVEITDPAIIAAATLSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++E+DSKP  +D+LERRLIQLKIE EA+K+E DE+SKK
Sbjct: 380 YITDRNLPDKAIDLIDEAASQIRMEMDSKPVELDRLERRLIQLKIEREALKKETDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI  +E +Y++LE++WK EK  +  +QQIKEE+E+ R+++  A R  D   +S
Sbjct: 440 RLSDLETEIKNVEKEYSDLEEVWKSEKASLHGTQQIKEELEQARIELEAAGRAGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ LK  SQK+ Q  ++     LL+++V  EE+AE+VS+ T IPVSK+++
Sbjct: 500 ELQYGIIPELDKKLKAASQKEEQFHDH----KLLRSRVTEEEVAEVVSKWTHIPVSKMLE 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E  L KRV+GQDEA++AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 556 GEREKLLHMETELHKRVIGQDEAVNAVANAIRRSRAGLSDPNRPVGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+A +F+ E++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RR+PYS+
Sbjct: 616 LCKALAAFLFDTEDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA++DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+E    + 
Sbjct: 676 ILLDEIEKAHNDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIREFSGENY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K AVM  V  +FRPEFINRID+ +VF  L ++ I +IA IQ++ +K +L + +  L 
Sbjct: 736 DKMKDAVMEVVAQHFRPEFINRIDEAVVFHSLKKEQIRNIAIIQIDRIKKRLKEKDYQLT 795

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLK-KIHKKSPEANFIFLGDLIN---KG 669
           IS  AL  +S +G+D +YGAR +   K+ L   L+  + +K  E  F+  G LIN   KG
Sbjct: 796 ISDDALDYLSELGYDPVYGARPL---KRVLQQQLENPLSQKILEGKFV-PGSLINIEKKG 851

Query: 670 PQ 671
            Q
Sbjct: 852 EQ 853


>gi|329122865|ref|ZP_08251437.1| chaperone protein ClpB [Haemophilus aegyptius ATCC 11116]
 gi|327472129|gb|EGF17567.1| chaperone protein ClpB [Haemophilus aegyptius ATCC 11116]
          Length = 856

 Score =  804 bits (2076), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/621 (60%), Positives = 504/621 (81%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  SQ IK+E++  + ++ +A R  D   +S
Sbjct: 440 RLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L++    +        + TLL+ +V  EEIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPALEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEELHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  ++   
Sbjct: 674 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKEESY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA+IQL  L  ++     +L 
Sbjct: 734 SEMKALVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELV 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D IYGAR
Sbjct: 794 FTDALLDFIGEVGYDPIYGAR 814


>gi|262273641|ref|ZP_06051454.1| ClpB protein [Grimontia hollisae CIP 101886]
 gi|262222056|gb|EEY73368.1| ClpB protein [Grimontia hollisae CIP 101886]
          Length = 857

 Score =  804 bits (2076), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/621 (59%), Positives = 507/621 (81%), Gaps = 7/621 (1%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPV+IGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RLK
Sbjct: 201 NPVIIGEPGVGKTAIVEGLAQRIVNGEVPEGLRNKRVLSLDMGSLVAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L E++  + ++I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 261 SVLNELAKEEGNVILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           QY+EKDAA ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY
Sbjct: 321 QYVEKDAALERRFQKVLVDEPTVEDTVAILRGLKERYELHHAVEITDPAIVAAASLSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           ISDR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERRLIQLKIE +A+ +E DE+SKKR
Sbjct: 381 ISDRQLPDKAIDLIDEAASSIRMQIDSKPEQLDRLERRLIQLKIEQQALAKENDEASKKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L  ++ EI++ E +YA LE++W  EK  +  +Q IK  +E+ R  +  A R  D   +S+
Sbjct: 441 LETLQSEIDEKEREYAELEEVWNAEKAALSGTQHIKSALEQARTDLEIARRAGDLNRMSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG + +LE+ L   SQ ++Q      + TLLK +V   EIAE++SR TGIPV+K+++ 
Sbjct: 501 LQYGRIPELEKQLDLASQAEMQ------EMTLLKNRVTDAEIAEVLSRQTGIPVAKMLEG 554

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           E+EKLL++E+ L  RV+GQ+EA+++V+NAIRRSR+GL+D  RP GSF+FLGPTGVGKTEL
Sbjct: 555 EKEKLLHMEDELHSRVIGQEEAVTSVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTEL 614

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK+L+  +F++ ++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+I
Sbjct: 615 CKSLAEFLFDSSDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSVI 674

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDK 553
           LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRN +++MTSNLGSD+I+E   + D 
Sbjct: 675 LLDEVEKAHPDVFNLLLQVLDDGRLTDGQGRTVDFRNAVVIMTSNLGSDRIQEHFGELDY 734

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             IK  VM+ V  +FRPEFINR+D+ +VF  L +++I SIA+IQL  L  ++ + ++ L+
Sbjct: 735 SGIKAMVMDVVSKHFRPEFINRVDESVVFHPLGQEHIKSIASIQLAHLAKRMAERDLILE 794

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++  AL  I++ GFD +YGAR
Sbjct: 795 VTDEALTLIADAGFDPVYGAR 815


>gi|70732609|ref|YP_262372.1| ATP-dependent chaperone protein ClpB [Pseudomonas protegens Pf-5]
 gi|68346908|gb|AAY94514.1| ATP-dependent chaperone protein ClpB [Pseudomonas protegens Pf-5]
          Length = 854

 Score =  804 bits (2076), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/621 (62%), Positives = 511/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKEDDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI +LE +YA+LE++W  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIVRLEREYADLEEVWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  ++  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGHSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+LL +RV+GQ+EA+ AV+NA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLLKMESLLHERVIGQNEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  + L+
Sbjct: 733 EAQRAAVMDAVSTHFRPEFINRVDEVVIFEPLARDQIAGITQIQLGRLRSRLAERELSLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSDEALDKLIAVGYDPVYGAR 813


>gi|170728049|ref|YP_001762075.1| ATP-dependent chaperone ClpB [Shewanella woodyi ATCC 51908]
 gi|169813396|gb|ACA87980.1| ATP-dependent chaperone ClpB [Shewanella woodyi ATCC 51908]
          Length = 857

 Score =  804 bits (2076), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/657 (59%), Positives = 516/657 (78%), Gaps = 15/657 (2%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRIINGEVP  + +K++L LD+  L+AG KYRGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIINGEVPEGIKNKRVLSLDMGSLVAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L E+S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYR
Sbjct: 261 AVLNELSQEEGQVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGDLHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           QYIEKDAA ERRFQK+LVEEP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ +S RY
Sbjct: 321 QYIEKDAALERRFQKVLVEEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASMSNRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           +SDR +PDKAIDLIDEAA+ I+I+IDSKPE +DKLERR IQLK+E +A+ +E DE+S +R
Sbjct: 381 VSDRKLPDKAIDLIDEAASSIRIQIDSKPEPLDKLERRAIQLKLEEQALTKEADEASLRR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           LL I+KE+ ++E+K + L ++W+ EK  +  +Q IK ++E+ RL ++ A R SD   +S+
Sbjct: 441 LLTIRKELREVEVKASELNEVWRTEKAALAGTQHIKSDLEQARLDLDVARRASDLTRMSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG + +LE+ L   SQ ++Q      + TLL+ KV   EIAE++SR TGIPVSK+++ 
Sbjct: 501 LQYGRIPELEKQLDLASQAEMQ------EMTLLRNKVTDVEIAEVLSRATGIPVSKMLEG 554

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           EREKLL++E+ L  +V+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTEL
Sbjct: 555 EREKLLHMEDALHTQVIGQNEAVDAVSNAIRRSRAGLSDPDRPIGSFLFLGPTGVGKTEL 614

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK+L+  +F+ E +++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+I
Sbjct: 615 CKSLAKFLFDTESALVRIDMSEFMEKHSVARLLGAPPGYVGYEEGGYLTEAVRRKPYSVI 674

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDK 553
           LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E       
Sbjct: 675 LLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDIIQERFSTLSY 734

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K  VMN V   FRPEF+NR+D+ +VF  L  K+I  IA+IQ+  L  +L + + +L 
Sbjct: 735 DEMKSEVMNVVVHSFRPEFLNRVDETVVFHPLGEKHIEHIASIQIESLMRRLAEKDYELD 794

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGP 670
           IS  AL  I+  GFD +YGAR +   K++L     +   ++P A  I  G L+   P
Sbjct: 795 ISDDALSFIARAGFDPVYGARPL---KRAL-----QQEVENPLAQKILSGSLVPGKP 843


>gi|68249453|ref|YP_248565.1| ClpB [Haemophilus influenzae 86-028NP]
 gi|386266414|ref|YP_005829906.1| ATP-dependent Clp protease ATPase subunit [Haemophilus influenzae
           R2846]
 gi|68057652|gb|AAX87905.1| ClpB [Haemophilus influenzae 86-028NP]
 gi|309973650|gb|ADO96851.1| ATP-dependent Clp protease ATPase subunit [Haemophilus influenzae
           R2846]
          Length = 856

 Score =  803 bits (2075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/621 (60%), Positives = 504/621 (81%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  SQ IK+E++  + ++ +A R  D   +S
Sbjct: 440 RLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L++    +        + TLL+ +V  EEIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPALEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEDELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  +    
Sbjct: 674 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA+IQL  L  ++     +L 
Sbjct: 734 SEMKALVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELV 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D IYGAR
Sbjct: 794 FTDALLDFIGEVGYDPIYGAR 814


>gi|443468563|ref|ZP_21058770.1| ClpB protein [Pseudomonas pseudoalcaligenes KF707]
 gi|442897782|gb|ELS24599.1| ClpB protein [Pseudomonas pseudoalcaligenes KF707]
          Length = 854

 Score =  803 bits (2075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/621 (61%), Positives = 510/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRI+NGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIVNGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNELSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEALDRLDRRLIQLKIEREALKKEEDEATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++++I KLE +YA+LE+IWK EK  ++ S QI+++IE+ R  +  A RK D Q ++
Sbjct: 440 RLAKLEEDILKLEREYADLEEIWKSEKAEVQGSAQIQQKIEQARQDMEAARRKGDLQRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPV+K+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPVAKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L KRV+GQ EA+ AV+NA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEDELHKRVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEALVRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L+DE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+  GD+
Sbjct: 674 VLMDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSTQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID+++VF  L R  I  IA IQL  L+ +L++  + L+
Sbjct: 733 EAQRAAVMDAVGNHFRPEFINRIDEVVVFEPLGRDQIGGIAEIQLQRLRKRLVERELSLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLIAVGYDPVYGAR 813


>gi|417841857|ref|ZP_12487955.1| Chaperone protein ClpB [Haemophilus haemolyticus M19501]
 gi|341948231|gb|EGT74862.1| Chaperone protein ClpB [Haemophilus haemolyticus M19501]
          Length = 856

 Score =  803 bits (2075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/621 (60%), Positives = 504/621 (81%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGRIILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  SQ IK+E++  + ++ +A R  D   +S
Sbjct: 440 RLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L++    +        + TLL+ +V  EEIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPALEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEDELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++D+FNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  +    
Sbjct: 674 ILLDEVEKAHADIFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA+IQL  L  ++     +L 
Sbjct: 734 SEMKALVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELV 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D IYGAR
Sbjct: 794 FTDALLDFIGEVGYDPIYGAR 814


>gi|357416692|ref|YP_004929712.1| ATP-dependent Clp protease subunit [Pseudoxanthomonas spadix
           BD-a59]
 gi|355334270|gb|AER55671.1| ATP-dependent Clp protease subunit [Pseudoxanthomonas spadix
           BD-a59]
          Length = 861

 Score =  803 bits (2075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/624 (61%), Positives = 503/624 (80%), Gaps = 10/624 (1%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+NGEVP +L +K++L LD+  L+AG K+RGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIVNGEVPENLKNKRVLSLDMGALIAGAKFRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L +++ ++  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 261 GVLNDLAKSEGQIILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           +YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS+RY
Sbjct: 321 KYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DR +PDKAIDL+DEAA++I++EIDSKPE +D++ERRLIQLK + E +K+E D  S KR
Sbjct: 381 IADRQLPDKAIDLMDEAASRIRMEIDSKPEELDRMERRLIQLKTQREMLKKEKDAESAKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L  ++ +I+ LE ++++L ++WK EK  ++ + +IKE+IE  R+++  A R+ D+  +S+
Sbjct: 441 LADLEADIDTLEREFSDLNEVWKSEKAALQGATRIKEQIEAARVELEGAQRRQDYARMSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           ++YG L +LE+ L E             +F L++ +V +EEIAE+VSR TGIPVSK+++ 
Sbjct: 501 IQYGVLPQLEKQLAEAQA------AEQQEFKLVQDRVTAEEIAEVVSRWTGIPVSKMLEG 554

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           EREKLL +E+ L +RVVGQ+EAI  VS+++RRSR+GLSD  RP GSF+FLGPTGVGKTEL
Sbjct: 555 EREKLLKMEDQLRERVVGQEEAIKVVSDSVRRSRAGLSDPNRPSGSFLFLGPTGVGKTEL 614

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L+  +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSLI
Sbjct: 615 CKALAEFLFDSSEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLI 674

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I+EM   +  
Sbjct: 675 LLDEVEKAHGDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQLIQEMSHDESA 734

Query: 555 ----IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNM 610
                IK AVM  V+ +FRPEFINR+DDI+VF  L++  I  IA IQL  L+ +L    +
Sbjct: 735 ESYTKIKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKVQIRQIARIQLRGLEARLRDRGI 794

Query: 611 DLKISKAALKKISNIGFDLIYGAR 634
            L++S AAL  + +IGFD +YGAR
Sbjct: 795 GLEVSDAALSILGDIGFDPVYGAR 818


>gi|386010294|ref|YP_005928571.1| chaperone ClpB [Pseudomonas putida BIRD-1]
 gi|313497000|gb|ADR58366.1| ClpB [Pseudomonas putida BIRD-1]
          Length = 831

 Score =  803 bits (2075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/621 (61%), Positives = 508/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 177 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERL 236

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 237 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEY 296

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 297 RQFIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 356

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KK
Sbjct: 357 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKK 416

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 417 RLEKLTEEIERLEREYSDLEEIWASEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 476

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +      LL+ KV  EEIAE+VS+ TGIPV+K+++
Sbjct: 477 ELQYGVIPDLERSLQMVDQ------HGKTDNQLLRNKVTEEEIAEVVSKWTGIPVAKMLE 530

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL +RV+GQ EA++AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 531 GEREKLLKMEELLHQRVIGQSEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 590

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 591 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 650

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 651 VLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 709

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID+++VF  L R+ I  I  IQL  L+++LL+  + L 
Sbjct: 710 EAQRAAVMDAVGAHFRPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLS 769

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 770 LSPEALDKLIAVGYDPVYGAR 790


>gi|342903657|ref|ZP_08725465.1| Chaperone protein ClpB [Haemophilus haemolyticus M21621]
 gi|341954908|gb|EGT81377.1| Chaperone protein ClpB [Haemophilus haemolyticus M21621]
          Length = 856

 Score =  803 bits (2075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/621 (60%), Positives = 503/621 (80%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+   E +YA LE++WK EK  +  SQ IK+E++  + ++ +A R  D   +S
Sbjct: 440 RLEMLEKELADKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L++    +        + TLL+ +V  EEIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPALEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEDELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  +    
Sbjct: 674 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA+IQL  L  ++     +L 
Sbjct: 734 SEMKALVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELV 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D IYGAR
Sbjct: 794 FTDALLDFIGEVGYDPIYGAR 814


>gi|26987361|ref|NP_742786.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
           putida KT2440]
 gi|54035836|sp|Q88Q71.1|CLPB_PSEPK RecName: Full=Chaperone protein ClpB
 gi|24982014|gb|AAN66250.1|AE016253_5 ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
           putida KT2440]
          Length = 854

 Score =  803 bits (2075), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/621 (61%), Positives = 508/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLALDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQFIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVESQALKKEEDEAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLTEEIERLEREYSDLEEIWASEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +      LL+ KV  EEIAE+VS+ TGIPV+K+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKTDNQLLRNKVTEEEIAEVVSKWTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL +RV+GQ EA++AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLKMEELLHQRVIGQSEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 VLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID+++VF  L R+ I  I  IQL  L+++LL+  + L 
Sbjct: 733 EAQRAAVMDAVGAHFRPEFINRIDEVVVFEPLGREQIAGITEIQLGRLRSRLLERELSLS 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLIAVGYDPVYGAR 813


>gi|417844398|ref|ZP_12490442.1| Chaperone protein ClpB [Haemophilus haemolyticus M21639]
 gi|341956851|gb|EGT83267.1| Chaperone protein ClpB [Haemophilus haemolyticus M21639]
          Length = 856

 Score =  803 bits (2074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/621 (59%), Positives = 504/621 (81%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  SQ IK++++  + ++ +A R  D   +S
Sbjct: 440 RLEMLEKELTEKEREYAELEEVWKSEKATLSGSQHIKQDLDTAKTELEQARRAGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L++         +   + TLL+ +V  EEIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPALEKQLEQAE------TSEGKEMTLLRYRVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEDELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  +    
Sbjct: 674 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKDESY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA+IQL  L  ++     +L 
Sbjct: 734 SEMKALVMSVVGQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELV 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D IYGAR
Sbjct: 794 FTDALLDFIGEVGYDPIYGAR 814


>gi|381150512|ref|ZP_09862381.1| ATP-dependent chaperone ClpB [Methylomicrobium album BG8]
 gi|380882484|gb|EIC28361.1| ATP-dependent chaperone ClpB [Methylomicrobium album BG8]
          Length = 858

 Score =  803 bits (2074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/622 (61%), Positives = 507/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  +  K++L LD+A L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKGKRVLALDMAALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDLAKQEGQVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKDAA ERRFQK+LV+EP +E+TI+ILRGL++KYEVHHGVEITDPAIVAA+ LSYR
Sbjct: 320 RKYVEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYEVHHGVEITDPAIVAAAGLSYR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA++I++E DSKPE MD+L+RRLIQLKIE  A+K+E D +SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAASRIRMEQDSKPEEMDRLDRRLIQLKIEQVALKKESDPASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++++EI ++E  Y++LE+IWK EK  ++ S  IKE+++  ++++  A R  D   ++
Sbjct: 440 RLEILEEEIAEVEKDYSDLEEIWKAEKASLQGSASIKEKLDHAKVELESARRAGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L +           A K TLL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPELEKQLAQAGT------GEAKKMTLLRNKVTEEEIAEVVSKWTGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  + KRVVGQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEEAISKRVVGQEEALKAVSNAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+  ++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTADALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           IL+DE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT++VMTSNLGS +I+E+  + +
Sbjct: 674 ILMDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSSRIQELAGEAN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  VM  V ++FRPEFINRID+++VF  L R+ I +IA IQ+  L+ +L    +  
Sbjct: 734 YQEMKNEVMEIVGMHFRPEFINRIDEVVVFHPLEREQIRAIAKIQIANLQKRLADREIGF 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +IS+AAL ++   GFD +YGAR
Sbjct: 794 EISEAALDRLGEAGFDPVYGAR 815


>gi|320157323|ref|YP_004189702.1| ClpB protein [Vibrio vulnificus MO6-24/O]
 gi|319932635|gb|ADV87499.1| ClpB protein [Vibrio vulnificus MO6-24/O]
          Length = 857

 Score =  803 bits (2074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/622 (60%), Positives = 501/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELSKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+N+ E ++A LE+IW  EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 440 RLRSLNEELNEKEREFAELEEIWNAEKAALSGTQHIKAALEQARMDMEFARRAGDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLLK KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLKNKVTDNEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  VSNAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEEVLHKRVIGQKEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFAMLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM  V  +FRPEF+NR+D+ +VF  L + +I SIA IQL  L N++ +    L
Sbjct: 734 YQGIKEQVMEVVTKHFRPEFLNRVDETVVFHPLGQDHIKSIAAIQLKRLANRMEEHGYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S  AL+ I+ +GFD +YGAR
Sbjct: 794 EVSDKALELIAQVGFDPVYGAR 815


>gi|145632228|ref|ZP_01787963.1| DNA polymerase I [Haemophilus influenzae 3655]
 gi|145634718|ref|ZP_01790426.1| ATP-dependent Clp protease ATPase subunit [Haemophilus influenzae
           PittAA]
 gi|260579950|ref|ZP_05847780.1| ATP-dependent chaperone ClpB [Haemophilus influenzae RdAW]
 gi|144987135|gb|EDJ93665.1| DNA polymerase I [Haemophilus influenzae 3655]
 gi|145267884|gb|EDK07880.1| ATP-dependent Clp protease ATPase subunit [Haemophilus influenzae
           PittAA]
 gi|260093234|gb|EEW77167.1| ATP-dependent chaperone ClpB [Haemophilus influenzae RdAW]
          Length = 856

 Score =  803 bits (2074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/621 (60%), Positives = 504/621 (81%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  SQ IK+E++  + ++ +A R  D   +S
Sbjct: 440 RLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L++    +        + TLL+ +V  EEIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPDLEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEDELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  +    
Sbjct: 674 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA+IQL  L  ++     +L 
Sbjct: 734 SEMKALVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELV 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D IYGAR
Sbjct: 794 FTDALLDFIGEVGYDPIYGAR 814


>gi|16272799|ref|NP_439019.1| ATP-dependent Clp protease ATPase subunit [Haemophilus influenzae
           Rd KW20]
 gi|1168973|sp|P44403.1|CLPB_HAEIN RecName: Full=Chaperone protein ClpB
 gi|1573874|gb|AAC22518.1| ATP-dependent Clp protease, ATPase subunit (clpB) [Haemophilus
           influenzae Rd KW20]
          Length = 856

 Score =  803 bits (2074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/621 (60%), Positives = 504/621 (81%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  SQ IK+E++  + ++ +A R  D   +S
Sbjct: 440 RLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L++    +        + TLL+ +V  EEIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPDLEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEDELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  +    
Sbjct: 674 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA+IQL  L  ++     +L 
Sbjct: 734 SEMKALVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELV 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D IYGAR
Sbjct: 794 FTDALLDFIGEVGYDPIYGAR 814


>gi|145629931|ref|ZP_01785713.1| hypothetical protein CGSHi22421_07768 [Haemophilus influenzae
           R3021]
 gi|229844737|ref|ZP_04464876.1| ClpB [Haemophilus influenzae 6P18H1]
 gi|144984212|gb|EDJ91635.1| hypothetical protein CGSHi22421_07768 [Haemophilus influenzae
           R3021]
 gi|229812451|gb|EEP48141.1| ClpB [Haemophilus influenzae 6P18H1]
          Length = 856

 Score =  803 bits (2074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/621 (60%), Positives = 504/621 (81%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  SQ IK+E++  + ++ +A R  D   +S
Sbjct: 440 RLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L++    +        + TLL+ +V  EEIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPDLEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEDELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  +    
Sbjct: 674 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA+IQL  L  ++     +L 
Sbjct: 734 SEMKALVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELV 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D IYGAR
Sbjct: 794 FTDALLDFIGEVGYDPIYGAR 814


>gi|419840223|ref|ZP_14363619.1| ATP-dependent chaperone protein ClpB [Haemophilus haemolyticus
           HK386]
 gi|386908044|gb|EIJ72743.1| ATP-dependent chaperone protein ClpB [Haemophilus haemolyticus
           HK386]
          Length = 856

 Score =  803 bits (2074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/621 (59%), Positives = 504/621 (81%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  SQ IK+E++  + ++ +A R  D   +S
Sbjct: 440 RLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L++    +        + TLL+ +V  EEIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPALEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L +RV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEDELHRRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  +    
Sbjct: 674 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKDESY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA+IQL  L  ++     +L 
Sbjct: 734 SEMKALVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELV 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D IYGAR
Sbjct: 794 FTDALLDFIGEVGYDPIYGAR 814


>gi|219870451|ref|YP_002474826.1| ATP-dependent Clp protease subunit B [Haemophilus parasuis SH0165]
 gi|219690655|gb|ACL31878.1| ATP-dependent Clp protease chain B/ATPases with chaperone activity,
           ATP-binding subunit [Haemophilus parasuis SH0165]
          Length = 857

 Score =  803 bits (2074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 513/622 (82%), Gaps = 5/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 258 KAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 318 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++
Sbjct: 378 YISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +++   E +YA LE++WK EK+ +  +Q IK E+E  R+++++A R+++++ +S
Sbjct: 438 RLAKLDEDLTAREREYAELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L+E  +++ +   N     LL+TKV  EEIAE++S+ TGIPVSK+++
Sbjct: 498 ELQYGKIPALEKQLQEAVKREEEGGEN----HLLRTKVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEVLHKRVIGQSEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFLFDDQDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+E  E   
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENAENMS 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  VMN V  +FRPEFINRID+ +VF  L+++NI +IA IQL  L  ++ +   ++
Sbjct: 734 YDEMKTIVMNVVGQHFRPEFINRIDETVVFHPLDKENIRAIARIQLERLIKRMAERGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            ++ AA+  I   GFD ++GAR
Sbjct: 794 TVTDAAVDHIGEAGFDPLFGAR 815


>gi|389681723|ref|ZP_10173067.1| ATP-dependent chaperone protein ClpB [Pseudomonas chlororaphis O6]
 gi|388554258|gb|EIM17507.1| ATP-dependent chaperone protein ClpB [Pseudomonas chlororaphis O6]
          Length = 854

 Score =  803 bits (2074), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/621 (62%), Positives = 510/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKEDDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI +LE +YA+LE++W  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEITRLEREYADLEEVWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  ++  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGQSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+LL +RV+GQ+EA+ AV+NA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLLKMESLLHQRVIGQNEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSVQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID++++F  L R  I  I  IQL  L+ +L +  + L+
Sbjct: 733 EAQRAAVMDAVSSHFRPEFINRIDEVVIFEPLARDQIAGITEIQLGRLRGRLAERELKLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSGEALDKLIAVGYDPVYGAR 813


>gi|153207187|ref|ZP_01945966.1| ATP-dependent chaperone ClpB [Coxiella burnetii 'MSU Goat Q177']
 gi|212219427|ref|YP_002306214.1| ClpB [Coxiella burnetii CbuK_Q154]
 gi|120576848|gb|EAX33472.1| ATP-dependent chaperone ClpB [Coxiella burnetii 'MSU Goat Q177']
 gi|212013689|gb|ACJ21069.1| ClpB [Coxiella burnetii CbuK_Q154]
          Length = 859

 Score =  803 bits (2073), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/662 (60%), Positives = 532/662 (80%), Gaps = 12/662 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKQKRLLALDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L++I+  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLRDIAKEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LVEEP  E+ I+ILRGL+++YEVHHGVEITDPAI+AA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVLVEEPSTEDAIAILRGLKERYEVHHGVEITDPAIIAAATLSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++E+DSKP  +D+LERRLIQLKIE EA+K+E DE+SKK
Sbjct: 380 YITDRNLPDKAIDLIDEAASQIRMEMDSKPVELDRLERRLIQLKIEREALKKETDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI  +E +Y++LE++WK EK  +  +QQIKEE+E+ R+++  A R  D   +S
Sbjct: 440 RLSDLETEIKNVEKEYSDLEEVWKSEKASLHGTQQIKEELEQARIELEAAGRAGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ LK  SQK+ Q  ++     LL+++V  EE+AE+VS+ T IPVSK+++
Sbjct: 500 ELQYGIIPELDKKLKAASQKEEQFHDH----KLLRSRVTEEEVAEVVSKWTHIPVSKMLE 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E  L KRV+GQDEA++AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 556 GEREKLLHMETELHKRVIGQDEAVNAVANAIRRSRAGLSDPNRPVGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+A +F+ E++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RR+PYS+
Sbjct: 616 LCKALAAFLFDTEDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA++DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+E    + 
Sbjct: 676 ILLDEIEKAHNDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIREFSGENY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K AVM  V  +FRPEFINRID+ +VF  L ++ I +IA IQ++ +K +L + +  L 
Sbjct: 736 DKMKDAVMEVVAQHFRPEFINRIDEAVVFHSLKKEQIRNIAIIQIDRIKKRLKEKDYQLT 795

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLK-KIHKKSPEANFIFLGDLIN---KG 669
           IS  AL  +S +G+D +YGAR +   K+ L   L+  + +K  E  F+  G LIN   KG
Sbjct: 796 ISDDALDYLSELGYDPVYGARPL---KRVLQQQLENPLSQKILEGKFV-PGSLINIEKKG 851

Query: 670 PQ 671
            Q
Sbjct: 852 EQ 853


>gi|256822309|ref|YP_003146272.1| ATP-dependent chaperone ClpB [Kangiella koreensis DSM 16069]
 gi|256795848|gb|ACV26504.1| ATP-dependent chaperone ClpB [Kangiella koreensis DSM 16069]
          Length = 862

 Score =  803 bits (2073), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/627 (60%), Positives = 510/627 (81%), Gaps = 12/627 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIG PGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGAPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDLAKEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQY+EKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGVEITDPAIVAA+ LS R
Sbjct: 320 RQYVEKDAALERRFQKVLVDEPSTEDTIAILRGLKERYEVHHGVEITDPAIVAATTLSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE+MDKLERRLIQLKI+ EA+K+E DESSKK
Sbjct: 380 YITDRQLPDKAIDLVDEAASRIRMEIDSKPEVMDKLERRLIQLKIQREALKKEEDESSKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RLL ++++I +LE ++A L++IW  EK  +  +Q IK +++K R+++  A R  D   +S
Sbjct: 440 RLLDLEQQIAELEKEFAELDEIWSSEKASVHGAQNIKADLDKARVELEAAQRAGDLTRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE  L + S++D        +  LL+ KV   EIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGTIPELEAKLAKVSEQD------TVEMQLLRNKVTDVEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E++L   V+GQDEA++AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEDVLHNNVIGQDEAVTAVSNAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKH+++RLIGAPPGY+GYE+GGYLTE VRRKPYS+
Sbjct: 614 LCKTLAKFLFDSEDNMVRIDMSEFMEKHAVARLIGAPPGYVGYEQGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE----ME 549
           IL DE+EKA+ DVFN+LLQ+L+DGRLTD++GRT++F+NT+IVMTSN+GSD I+      E
Sbjct: 674 ILFDEVEKAHPDVFNVLLQVLEDGRLTDSQGRTVDFKNTVIVMTSNMGSDLIQAHSANTE 733

Query: 550 KGDK--EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLK 607
            GDK  E +K  +M+ +  +FRPEFINRID+I+VF  L ++ I SIA IQ+  L  +L +
Sbjct: 734 GGDKDYEDMKSMLMDVIGKHFRPEFINRIDEIVVFHPLAKEQIKSIAAIQMERLLQRLRE 793

Query: 608 MNMDLKISKAALKKISNIGFDLIYGAR 634
              ++K++   L+ +S  GFD ++GAR
Sbjct: 794 QGFEVKVTDGLLELLSESGFDPVFGAR 820


>gi|145628239|ref|ZP_01784040.1| ClpB [Haemophilus influenzae 22.1-21]
 gi|145638337|ref|ZP_01793947.1| ClpB [Haemophilus influenzae PittII]
 gi|144980014|gb|EDJ89673.1| ClpB [Haemophilus influenzae 22.1-21]
 gi|145272666|gb|EDK12573.1| ClpB [Haemophilus influenzae PittII]
 gi|309751479|gb|ADO81463.1| ATP-dependent Clp protease ATPase subunit [Haemophilus influenzae
           R2866]
          Length = 856

 Score =  803 bits (2073), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/621 (60%), Positives = 503/621 (80%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  SQ IK+E++  + ++ +A R  D   +S
Sbjct: 440 RLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L++    +        + TLL+ +V  EEIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPALEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEELHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  +    
Sbjct: 674 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA+IQL  L  ++     +L 
Sbjct: 734 SEMKALVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELV 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D IYGAR
Sbjct: 794 FTDALLDFIGEVGYDPIYGAR 814


>gi|381395263|ref|ZP_09920967.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
           punicea DSM 14233 = ACAM 611]
 gi|379329072|dbj|GAB56100.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
           punicea DSM 14233 = ACAM 611]
          Length = 857

 Score =  802 bits (2072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/623 (61%), Positives = 501/623 (80%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP  L +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDMGSLLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAREEGRVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVE+P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS R
Sbjct: 320 RQYIEKDAALERRFQKVLVEQPSVEDTIAILRGLKERYELHHAVDITDPAIVAAASLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE MDKLERR+IQLK+E +A+ +E D +S K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEEMDKLERRIIQLKLEEQALAKETDTASLK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I+ E  + EIKYA LEK+W  EK  ++ +Q IK ++E+ +L +  A R SD   +S
Sbjct: 440 RLEIIELEREQAEIKYAELEKVWNKEKEAMQGTQGIKTDLEQAKLDLEIARRASDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L++ +Q +I       + TLLK KV   EIA+++SR TGIPV K++ 
Sbjct: 500 ELQYGKIPALEQKLEKAAQNEI------TENTLLKNKVTEVEIADVLSRWTGIPVRKMLG 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KL+N+E  + ++V+GQ EA+ AVSNAIRRSR+GL+D  +P GS +FLGPTGVGKTE
Sbjct: 554 GEKDKLINMEAAIARQVIGQTEAVKAVSNAIRRSRAGLADPDKPVGSLLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ +E++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALATFMFDTQEAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD  GRT+NF+NTII+MTSNLGSD I + + G++
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGHGRTVNFKNTIIIMTSNLGSD-IIQAQSGEE 732

Query: 554 EIIKL--AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             +++  +VM  V  +FRPEFINR+DDI+VF  L  + I +IA IQLN L+ +L +M   
Sbjct: 733 NYVQMKASVMQVVGTHFRPEFINRVDDIVVFHLLGMQEIKAIAKIQLNGLRQRLSEMGYQ 792

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L+IS  AL K++  GFD  YGAR
Sbjct: 793 LEISARALDKLAESGFDPTYGAR 815


>gi|145636576|ref|ZP_01792243.1| ClpB [Haemophilus influenzae PittHH]
 gi|145270102|gb|EDK10038.1| ClpB [Haemophilus influenzae PittHH]
          Length = 856

 Score =  802 bits (2072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/621 (60%), Positives = 503/621 (80%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  SQ IK+E++  + ++ +A R  D   +S
Sbjct: 440 RLEMLEKELVEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L++    +        + TLL+ +V  EEIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPALEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  +    
Sbjct: 674 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA+IQL  L  ++     +L 
Sbjct: 734 SEMKALVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELV 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D IYGAR
Sbjct: 794 FTDALLDFIGEVGYDPIYGAR 814


>gi|251793445|ref|YP_003008174.1| ATP-dependent chaperone ClpB [Aggregatibacter aphrophilus NJ8700]
 gi|422337408|ref|ZP_16418379.1| chaperone ClpB [Aggregatibacter aphrophilus F0387]
 gi|247534841|gb|ACS98087.1| ATP-dependent chaperone ClpB [Aggregatibacter aphrophilus NJ8700]
 gi|353345435|gb|EHB89730.1| chaperone ClpB [Aggregatibacter aphrophilus F0387]
          Length = 856

 Score =  802 bits (2072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/661 (57%), Positives = 521/661 (78%), Gaps = 14/661 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLKELAQEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+++E D++S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  +Q IK E+E  R ++ +A R  D   +S
Sbjct: 440 RLEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIKAELENARTQMEQARRAGDLSKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L      +        + +LL+ +V  EEIAE++SR TGIPVSK+++
Sbjct: 500 ELQYGKIPELEKQLAAAEGAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEELHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  ++   
Sbjct: 674 ILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNQEESY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K  VM+ V  +FRPEFINRID+ +VF  LN+ NI +IA IQL  L N++      L 
Sbjct: 734 DEMKALVMSVVSQHFRPEFINRIDETVVFHPLNKDNIRAIAEIQLKRLINRMESRGYVLH 793

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
            +   L  IS IG+D IYGAR +   K+++   +     ++P A  I  G L+ + P ++
Sbjct: 794 FTDDTLNFISEIGYDPIYGARPL---KRAIQQEI-----ENPLAQQILSGSLLPEKPITV 845

Query: 674 D 674
           D
Sbjct: 846 D 846


>gi|58580960|ref|YP_199976.1| ATP-dependent Clp protease subunit [Xanthomonas oryzae pv. oryzae
           KACC 10331]
 gi|58425554|gb|AAW74591.1| ATP-dependent Clp protease subunit [Xanthomonas oryzae pv. oryzae
           KACC 10331]
          Length = 898

 Score =  802 bits (2072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/628 (60%), Positives = 507/628 (80%), Gaps = 16/628 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 237 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 296

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 297 KAVLSDLSKTEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 356

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS R
Sbjct: 357 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 416

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++
Sbjct: 417 YITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQ 476

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+KLE ++ +L ++WK EK  ++ + +IKE+IE  +L++  A R+ D+  +S
Sbjct: 477 RLADLESDIDKLEREFYDLNELWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMS 536

Query: 314 KLKYGELNKLER---ILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSK 370
           +++YG L +LE+   I  E    D         F L++ +V +EEIAE+VSR TGIPV+K
Sbjct: 537 EIQYGVLPQLEKQMLIANEVEHHD---------FKLVQDRVTAEEIAEVVSRWTGIPVNK 587

Query: 371 IVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVG 430
           +++ ER+KLL +E+ L  RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVG
Sbjct: 588 MLEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVG 647

Query: 431 KTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKP 490
           KTELCK L+  +F++ E++IRIDMSEF+EKH+++RLIGAPPGY+GYEEGGYLTE VRR+P
Sbjct: 648 KTELCKALADFLFDSTEAMIRIDMSEFMEKHAVARLIGAPPGYVGYEEGGYLTEAVRRRP 707

Query: 491 YSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME- 549
           Y+LILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+  
Sbjct: 708 YALILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSG 767

Query: 550 KGDKEI---IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLL 606
            G  E    +K AVM  V+ +FRPEFINR+DDI+VF  L++  I SIA IQL  L+ +L 
Sbjct: 768 DGSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLA 827

Query: 607 KMNMDLKISKAALKKISNIGFDLIYGAR 634
           +  + L +  AAL+ + N+GFD +YGAR
Sbjct: 828 ERGLRLDLDDAALELLGNVGFDPVYGAR 855


>gi|378697060|ref|YP_005179018.1| protein disaggregation chaperone [Haemophilus influenzae 10810]
 gi|301169578|emb|CBW29179.1| protein disaggregation chaperone [Haemophilus influenzae 10810]
          Length = 856

 Score =  802 bits (2072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/621 (60%), Positives = 503/621 (80%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  SQ IK+E++  + ++ +A R  D   +S
Sbjct: 440 RLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L++    +        + TLL+ +V  EEIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPDLEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEELHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  +    
Sbjct: 674 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA+IQL  L  ++     +L 
Sbjct: 734 SEMKALVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELV 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D IYGAR
Sbjct: 794 FTDALLDFIGEVGYDPIYGAR 814


>gi|375264537|ref|YP_005021980.1| ClpB protein [Vibrio sp. EJY3]
 gi|369839861|gb|AEX21005.1| ClpB protein [Vibrio sp. EJY3]
          Length = 857

 Score =  802 bits (2072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/622 (60%), Positives = 505/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+ + E +YA LE++W  EK  +  +Q IK E+E+ R+ +  A R  D   +S
Sbjct: 440 RLTTLNEELTEKEREYAELEEVWNTEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E++L +RV+GQ EA+  V+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEDVLHQRVIGQVEAVEVVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFAILD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM  V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L  +L + + DL
Sbjct: 734 YQGIKNEVMEVVSKHFRPEFLNRVDETVVFHPLGKEHIKSIASIQLERLHKRLAEKDYDL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL+ I+ +GFD +YGAR
Sbjct: 794 EVGDEALELIAQVGFDPVYGAR 815


>gi|194366917|ref|YP_002029527.1| ATP-dependent chaperone ClpB [Stenotrophomonas maltophilia R551-3]
 gi|194349721|gb|ACF52844.1| ATP-dependent chaperone ClpB [Stenotrophomonas maltophilia R551-3]
          Length = 861

 Score =  802 bits (2072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/661 (58%), Positives = 521/661 (78%), Gaps = 24/661 (3%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIIN EVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINDEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ ++  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKSEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL++KY VHHGVEITDPAIVAA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKEKYAVHHGVEITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA+++++EIDSKPE +D+LERR+IQLKI+ E +K+E DE+S++
Sbjct: 380 YITDRQLPDKAIDLMDEAASRLRMEIDSKPEELDRLERRVIQLKIQREMLKKEKDEASRQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+ LE ++++L +IWK EK  ++ + +IKE++E+ +L++  A R+ D+  +S
Sbjct: 440 RLADLENDIDGLEREFSDLNEIWKSEKAALQGTTKIKEQVEQAKLELESAQRRQDFAKMS 499

Query: 314 KLKYGELNKLERIL---KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSK 370
           +++YG L +LE+ L   +E   KD         F L++ +V  EEIAE+VSR TGIPV+K
Sbjct: 500 EIQYGLLPQLEKQLAAAQEAEHKD---------FKLVQDRVTDEEIAEVVSRWTGIPVNK 550

Query: 371 IVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVG 430
           +++ ER+KLL +E +L  RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVG
Sbjct: 551 MLEGERDKLLRMEEVLHNRVVGQEEAIKVVSDAVRRSRAGLSDPNRPAGSFLFLGPTGVG 610

Query: 431 KTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKP 490
           KTELCK+L+  +F++ +++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+P
Sbjct: 611 KTELCKSLAEFLFDSADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRP 670

Query: 491 YSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK 550
           YSLILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I++M  
Sbjct: 671 YSLILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQDMSS 730

Query: 551 GDKE----IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLL 606
            D       +K AVM  V+ +FRPEFINR+DDI+VF  L+++ I  IA IQ+  L+ +L 
Sbjct: 731 DDSPEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARIQMRGLEKRLA 790

Query: 607 KMNMDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
           +  + L +S AA   + N+GFD +YGAR +   K+++   L     ++P A  I  G  +
Sbjct: 791 ERGLKLVVSDAAFDLLGNVGFDPVYGARPL---KRAIQAQL-----ENPLAQKILSGAFV 842

Query: 667 N 667
           N
Sbjct: 843 N 843


>gi|149377764|ref|ZP_01895497.1| ATPase with chaperone activity, ATP-binding subunit [Marinobacter
           algicola DG893]
 gi|149357936|gb|EDM46425.1| ATPase with chaperone activity, ATP-binding subunit [Marinobacter
           algicola DG893]
          Length = 858

 Score =  802 bits (2072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/655 (58%), Positives = 519/655 (79%), Gaps = 17/655 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  II+FIDE+HTM+G GK EGS+DAGNMLKP LSRGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKQEGQIILFIDEIHTMVGAGKAEGSMDAGNMLKPALSRGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+ IEKDAA ERRFQK+LV EP  E+TI+ILRGL+++YEVHHGVE+TD AI+AA+ LS+R
Sbjct: 320 RENIEKDAALERRFQKVLVSEPTEEDTIAILRGLKERYEVHHGVEVTDGAIIAAARLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++E+DSKPE +D+LERRLIQLKIE EA+K+E D +SKK
Sbjct: 380 YIADRQLPDKAIDLVDEAASQIRMEMDSKPEALDRLERRLIQLKIEREALKKETDAASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + + I+ +E +YA+LE++W  EK  +  SQ+IK ++E+ R+ +  A R  D   +S
Sbjct: 440 RLSELSEVISGIEREYADLEEVWNTEKAALHGSQKIKSQLEQARIDLENARRAGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LER L   SQ ++       +  LL+ +V  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGQIPELERQLDMASQAEMM------EMKLLRNRVTDEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KL+ +E  L  RV+GQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLMRMEEALHGRVIGQDEAVEAVSNAVRRSRAGLSDPHRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGSD I++ + G++
Sbjct: 674 LLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSDIIQQ-KAGEE 732

Query: 554 --EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E +K  VM  V  +FRPEFINR+D+++VF  L    I  IA IQ++ L  +L + +M 
Sbjct: 733 NYEAMKSDVMAVVGTHFRPEFINRVDEVVVFHPLAESQIQGIARIQVDALGKRLKEQDMS 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
           L +  AA++ ++ +G+D +YGAR +   K+++  ++     ++P A  +  GD +
Sbjct: 793 LVLDDAAMELLAEVGYDPVYGARPL---KRAIQRMI-----ENPLAQRLLQGDFL 839


>gi|188578062|ref|YP_001914991.1| ATP-dependent chaperone ClpB [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188522514|gb|ACD60459.1| ATP-dependent chaperone ClpB [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 898

 Score =  802 bits (2072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/628 (60%), Positives = 507/628 (80%), Gaps = 16/628 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 237 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 296

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 297 KAVLSDLSKTEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 356

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS R
Sbjct: 357 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 416

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++
Sbjct: 417 YITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQ 476

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+KLE ++ +L ++WK EK  ++ + +IKE+IE  +L++  A R+ D+  +S
Sbjct: 477 RLADLESDIDKLEREFYDLNELWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMS 536

Query: 314 KLKYGELNKLER---ILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSK 370
           +++YG L +LE+   I  E    D         F L++ +V +EEIAE+VSR TGIPV+K
Sbjct: 537 EIQYGVLPQLEKQMLIANEVEHHD---------FKLVQDRVTAEEIAEVVSRWTGIPVNK 587

Query: 371 IVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVG 430
           +++ ER+KLL +E+ L  RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVG
Sbjct: 588 MLEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVG 647

Query: 431 KTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKP 490
           KTELCK L+  +F++ E++IRIDMSEF+EKH+++RLIGAPPGY+GYEEGGYLTE VRR+P
Sbjct: 648 KTELCKALADFLFDSTEAMIRIDMSEFMEKHAVARLIGAPPGYVGYEEGGYLTEAVRRRP 707

Query: 491 YSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME- 549
           Y+LILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+  
Sbjct: 708 YALILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSG 767

Query: 550 KGDKEI---IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLL 606
            G  E    +K AVM  V+ +FRPEFINR+DDI+VF  L++  I SIA IQL  L+ +L 
Sbjct: 768 DGSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRLA 827

Query: 607 KMNMDLKISKAALKKISNIGFDLIYGAR 634
           +  + L +  AAL+ + N+GFD +YGAR
Sbjct: 828 ERGLRLDLDDAALELLGNVGFDPVYGAR 855


>gi|444428933|ref|ZP_21224219.1| hypothetical protein B878_23058 [Vibrio campbellii CAIM 519 = NBRC
           15631]
 gi|444237842|gb|ELU49493.1| hypothetical protein B878_23058 [Vibrio campbellii CAIM 519 = NBRC
           15631]
          Length = 857

 Score =  802 bits (2072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 506/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+N+ E +YA LE++W  EK  +  +Q IK E+E+ R+ ++ A R  D   +S
Sbjct: 440 RLDVLNDELNEKEREYAELEEVWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIA+++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIADVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  VSNAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEEVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVLIMTSNLGSARIQENFATLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L  +L +    L
Sbjct: 734 YQGIKNEVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLERLAKRLEEKGYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++ + AL  I+ +GFD +YGAR
Sbjct: 794 EVPEKALDLIAQVGFDPVYGAR 815


>gi|322514940|ref|ZP_08067954.1| chaperone protein ClpB [Actinobacillus ureae ATCC 25976]
 gi|322119090|gb|EFX91247.1| chaperone protein ClpB [Actinobacillus ureae ATCC 25976]
          Length = 864

 Score =  802 bits (2071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/661 (57%), Positives = 527/661 (79%), Gaps = 12/661 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 205 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 264

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 265 KAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 324

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 325 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 384

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++
Sbjct: 385 YISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQ 444

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+   E +Y+ LE++WK EK+ +  +Q IK E+E  R+++++A R+S+++ +S
Sbjct: 445 RLAKLDEELTAREREYSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRESNFEKMS 504

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L E  +++ +   N     LL+TKV  EEIAE++S+ TGIPVSK+++
Sbjct: 505 ELQYGKIPALEKQLAEAVKREEEGGEN----QLLRTKVTDEEIAEVLSKATGIPVSKMME 560

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E++L  RV+GQ+EA+ AV+N+IRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 561 GEKEKLLRMEDVLHSRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 620

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 621 LCKTLANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 680

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+E      
Sbjct: 681 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENAYKGY 740

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           +++K  VM  V  +FRPEFINRID+ ++F  L +++I +IA IQL  L  +L + + ++ 
Sbjct: 741 DVVKTMVMEVVGQHFRPEFINRIDETVMFHSLGQEHIRAIARIQLQRLIARLAERDYEVT 800

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
            + AAL  I   GFD ++GAR +   K+++   L     ++P A  I  G L+   P  +
Sbjct: 801 ATDAALDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLAQKILSGKLLPNSPVVV 852

Query: 674 D 674
           D
Sbjct: 853 D 853


>gi|84622886|ref|YP_450258.1| ATP-dependent Clp protease subunit [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
 gi|84366826|dbj|BAE67984.1| ATP-dependent Clp protease subunit [Xanthomonas oryzae pv. oryzae
           MAFF 311018]
          Length = 861

 Score =  802 bits (2071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/629 (60%), Positives = 507/629 (80%), Gaps = 18/629 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KAVLSDLSKTEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E D++S++
Sbjct: 380 YITDRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDDASRQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+KLE ++ +L ++WK EK  ++ + +IKE+IE  +L++  A R+ D+  +S
Sbjct: 440 RLADLESDIDKLEREFYDLNELWKSEKAALQGTTKIKEQIEHAKLELEAAQRRQDYAKMS 499

Query: 314 KLKYGELNKLER---ILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSK 370
           +++YG L +LE+   I  E    D         F L++ +V +EEIAE+VSR TGIPV+K
Sbjct: 500 EIQYGVLPQLEKQMLIANEVEHHD---------FKLVQDRVTAEEIAEVVSRWTGIPVNK 550

Query: 371 IVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVG 430
           +++ ER+KLL +E+ L  RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVG
Sbjct: 551 MLEGERDKLLRMEDELHHRVVGQNEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVG 610

Query: 431 KTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKP 490
           KTELCK L+  +F++ E++IRIDMSEF+EKH+++RLIGAPPGY+GYEEGGYLTE VRR+P
Sbjct: 611 KTELCKALADFLFDSTEAMIRIDMSEFMEKHAVARLIGAPPGYVGYEEGGYLTEAVRRRP 670

Query: 491 YSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK 550
           Y+LILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+  
Sbjct: 671 YALILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQEL-S 729

Query: 551 GDKEI-----IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKL 605
           GD        +K AVM  V+ +FRPEFINR+DDI+VF  L++  I SIA IQL  L+ +L
Sbjct: 730 GDGSAEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKAQIKSIARIQLQGLEKRL 789

Query: 606 LKMNMDLKISKAALKKISNIGFDLIYGAR 634
            +  + L +  AAL+ + N+GFD +YGAR
Sbjct: 790 AERGLRLDLDDAALELLGNVGFDPVYGAR 818


>gi|429212832|ref|ZP_19203997.1| ClpB protein [Pseudomonas sp. M1]
 gi|428157314|gb|EKX03862.1| ClpB protein [Pseudomonas sp. M1]
          Length = 854

 Score =  802 bits (2071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/621 (61%), Positives = 511/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKQEGRIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++++I KLE +YA+LE+IWK EK  ++ S QI+++IE+ + ++  A RK D   ++
Sbjct: 440 RLAKLEEDIAKLEREYADLEEIWKSEKAEVQGSAQIQQKIEQAKTELELARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKAENQLLRNKVTDEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L KRV+GQ EA+ AV+NA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEDELHKRVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L+DE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+  GD+
Sbjct: 674 VLMDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSAQIQEL-VGDQ 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID+++VF  L R+ I  IA IQ+  L+ +L +  + L+
Sbjct: 733 EAQRAAVMDAVNAHFRPEFINRIDEVVVFEPLAREQIAGIAEIQMGRLRKRLAERELSLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+ K+  +GFD +YGAR
Sbjct: 793 LSTEAMDKLIAVGFDPVYGAR 813


>gi|260581686|ref|ZP_05849483.1| ATP-dependent chaperone ClpB [Haemophilus influenzae NT127]
 gi|260095279|gb|EEW79170.1| ATP-dependent chaperone ClpB [Haemophilus influenzae NT127]
          Length = 856

 Score =  802 bits (2071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/621 (60%), Positives = 502/621 (80%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  SQ IK+E++  + ++ +A R  D   +S
Sbjct: 440 RLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L++    +        + TLL+ +V  EEIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPDLEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  +    
Sbjct: 674 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L + NI +IA+IQL  L  ++     +L 
Sbjct: 734 SEMKALVMSVVSQHFRPEFINRIDETVVFHPLGKDNIRAIASIQLERLAKRMETRGYELV 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D IYGAR
Sbjct: 794 FTDALLDFIGEVGYDPIYGAR 814


>gi|424924967|ref|ZP_18348328.1| ClpB [Pseudomonas fluorescens R124]
 gi|404306127|gb|EJZ60089.1| ClpB [Pseudomonas fluorescens R124]
          Length = 854

 Score =  802 bits (2071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/621 (61%), Positives = 511/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KALLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAMK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIVRLEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  ++  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KL+ +E+LL +RV+GQDEA+ AV+NA+RRSR+GL+D  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLMKMESLLHQRVIGQDEAVVAVANAVRRSRAGLADPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSSQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  + L+
Sbjct: 733 EAQRAAVMDALTAHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELKLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+ K+  +G+D +YGAR
Sbjct: 793 LSPEAMDKLIAVGYDPVYGAR 813


>gi|365967014|ref|YP_004948576.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
           ANH9381]
 gi|365745927|gb|AEW76832.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
           ANH9381]
          Length = 856

 Score =  802 bits (2071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/621 (59%), Positives = 503/621 (80%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+++E D++S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  +Q IK E+E  R ++ +A R  D   +S
Sbjct: 440 RLEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIKAELENARTQMEQARRAGDLSKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L +    +        + +LL+ +V  EEIAE++SR TGIPV+K+++
Sbjct: 500 ELQYGKIPDLEKQLAQAEGAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVAKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL++E  L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLHMEEFLHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALASFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++  +   
Sbjct: 674 ILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQDHAQEGY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K  VM  V  YFRPEFINRID+ ++F  LN++NI  IA+IQL  L  ++      L 
Sbjct: 734 DTVKSMVMEVVGHYFRPEFINRIDETVMFHPLNKENIRQIADIQLRRLTRRMETHGYVLN 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  IS+IG+D I+GAR
Sbjct: 794 FTDATLDFISDIGYDPIFGAR 814


>gi|307248109|ref|ZP_07530137.1| hypothetical protein appser2_10900 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
 gi|306855286|gb|EFM87461.1| hypothetical protein appser2_10900 [Actinobacillus pleuropneumoniae
           serovar 2 str. S1536]
          Length = 864

 Score =  802 bits (2071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/661 (57%), Positives = 526/661 (79%), Gaps = 12/661 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 205 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 264

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 265 KAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 324

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 325 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 384

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++
Sbjct: 385 YISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQ 444

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+   E +Y+ LE++WK EK+ +  +Q IK E+E  R+++++A R+++++ +S
Sbjct: 445 RLAKLDEELTAREREYSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMS 504

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L E  +++ +   N     LL+TKV  EEIAE++S+ TGIPVSK+++
Sbjct: 505 ELQYGKIPALEKQLHEAVKREEEGSEN----QLLRTKVTEEEIAEVLSKATGIPVSKMME 560

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L  RV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 561 GEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 620

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 621 LCKTLANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 680

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+E  + D 
Sbjct: 681 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDY 740

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L + +I +IA IQL  L  +L +   ++ 
Sbjct: 741 AGMKEVVMSVVGQHFRPEFINRIDETVVFHPLGQAHIRAIARIQLQRLIARLAERGYEVT 800

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
           ++ AAL  I   GFD ++GAR +   K+++   L     ++P A  I  G L+   P  +
Sbjct: 801 VTNAALDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLAQQILSGKLLPNSPVVV 852

Query: 674 D 674
           D
Sbjct: 853 D 853


>gi|29653454|ref|NP_819146.1| ATP-dependent chaperone ClpB [Coxiella burnetii RSA 493]
 gi|161830087|ref|YP_001596062.1| ATP-dependent chaperone ClpB [Coxiella burnetii RSA 331]
 gi|212213377|ref|YP_002304313.1| ClpB [Coxiella burnetii CbuG_Q212]
 gi|54035826|sp|Q83F55.1|CLPB_COXBU RecName: Full=Chaperone protein ClpB
 gi|29540716|gb|AAO89660.1| ClpB [Coxiella burnetii RSA 493]
 gi|161761954|gb|ABX77596.1| ATP-dependent chaperone ClpB [Coxiella burnetii RSA 331]
 gi|212011787|gb|ACJ19168.1| ClpB [Coxiella burnetii CbuG_Q212]
          Length = 859

 Score =  802 bits (2071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/662 (60%), Positives = 531/662 (80%), Gaps = 12/662 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKQKRLLALDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+I+  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLKDIAKEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LVEEP  E+ I+ILRGL+++YEVHHGVEITDPAI+AA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVLVEEPSTEDAIAILRGLKERYEVHHGVEITDPAIIAAATLSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++E+DSKP  +D+LERRLIQLKIE EA+K+E DE+SKK
Sbjct: 380 YITDRNLPDKAIDLIDEAASQIRMEMDSKPVELDRLERRLIQLKIEREALKKETDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI  +E +Y++LE++WK EK  +  +QQIKEE+E+ R+++  A R  D   +S
Sbjct: 440 RLSDLETEIKNVEKEYSDLEEVWKSEKASLHGTQQIKEELEQARIELEAAGRAGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ LK  SQK+ Q  ++     LL+++V  EE+AE+VS+ T IPVSK+++
Sbjct: 500 ELQYGIIPELDKKLKAASQKEEQFHDH----KLLRSRVTEEEVAEVVSKWTHIPVSKMLE 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E  L KRV+GQDEA++AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 556 GEREKLLHMETELHKRVIGQDEAVNAVANAIRRSRAGLSDPNRPVGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ E++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RR+PYS+
Sbjct: 616 LCKALAVFLFDTEDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRRPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA++DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+E    + 
Sbjct: 676 ILLDEIEKAHNDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIREFSGENY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K AVM  V  +FRPEFINRID+ +VF  L ++ I +IA IQ++ +K +L + +  L 
Sbjct: 736 DKMKDAVMEVVAQHFRPEFINRIDEAVVFHSLKKEQIRNIAIIQIDRIKKRLKEKDYQLT 795

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLK-KIHKKSPEANFIFLGDLIN---KG 669
           IS  AL  +S +G+D +YGAR +   K+ L   L+  + +K  E  F+  G LIN   KG
Sbjct: 796 ISDDALDYLSELGYDPVYGARPL---KRVLQQQLENPLSQKILEGKFV-PGSLINIEKKG 851

Query: 670 PQ 671
            Q
Sbjct: 852 EQ 853


>gi|444376517|ref|ZP_21175759.1| ClpB protein [Enterovibrio sp. AK16]
 gi|443679337|gb|ELT85995.1| ClpB protein [Enterovibrio sp. AK16]
          Length = 857

 Score =  802 bits (2071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 505/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIVNGEVPEGLRNKRVLSLDMGSLVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + ++I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNVILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQY+EKDAA ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYVEKDAALERRFQKVLVDEPTVEDTVAILRGLKERYELHHAVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERRLIQLKIE +A+ +E DE+SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEQLDRLERRLIQLKIEQQALAKENDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI++ E  YA LE++W  EK  +  +Q IK  +E+ R  ++ A R  D   +S
Sbjct: 440 RLESLQSEIDEKERDYAELEEVWNAEKAALSGTQHIKSALEQARTDLDIARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   SQ ++Q      + TLLK +V   EIAE++SR TGIPV+K+++
Sbjct: 500 ELQYGRIPELEKQLDLASQAEMQ------EMTLLKNRVTDAEIAEVLSRQTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L  RV+GQ EA+++V+NAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLQMEDELHGRVIGQSEAVTSVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F++ ++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKSLAEFLFDSSDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRN +++MTSNLGSD+I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNLLLQVLDDGRLTDGQGRTVDFRNAVVIMTSNLGSDRIQEHFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              IK  VM+ V  +FRPEFINR+D+ +VF  L +++I SIA IQL  L  ++ + ++ L
Sbjct: 734 YNGIKAMVMDVVGKHFRPEFINRVDESVVFHPLGQEHIKSIAGIQLAHLAKRMAERDLKL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +++  AL  I++ GFD +YGAR
Sbjct: 794 EVTDEALTLIADAGFDPVYGAR 815


>gi|345428733|ref|YP_004821849.1| protein disaggregation chaperone [Haemophilus parainfluenzae T3T1]
 gi|301154792|emb|CBW14255.1| protein disaggregation chaperone [Haemophilus parainfluenzae T3T1]
          Length = 856

 Score =  802 bits (2071), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/621 (59%), Positives = 502/621 (80%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+   E +YA LE++WK EK  +  SQ IK+E++  + ++ +A R  D   +S
Sbjct: 440 RLEMLEKELADKEREYAELEEVWKSEKATLSGSQHIKQELDAAKTEMEQARRAGDLSKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L               + +LL+ +V  EEIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLAAAE------TGEGKEMSLLRYRVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  +    
Sbjct: 674 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKNESY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L+++NI +IA+IQL  L  ++     +L 
Sbjct: 734 GEMKALVMSVVSQHFRPEFINRIDETVVFHPLDKENIRAIASIQLERLAKRMETRGYELV 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            ++A L  I  +G+D IYGAR
Sbjct: 794 FTEALLDFIGEVGYDPIYGAR 814


>gi|52425838|ref|YP_088975.1| ClpA protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307890|gb|AAU38390.1| ClpA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 856

 Score =  801 bits (2070), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/661 (57%), Positives = 518/661 (78%), Gaps = 14/661 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLKELAQEEGKVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVDEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D+L+RR+IQLK+E +A+K+E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLDRRIIQLKLEQQALKKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+++ E +YA LE++WK EK  +  +Q IK E+E  R ++ +A R  D   +S
Sbjct: 440 RLDMLEKELSEKEREYAELEEVWKSEKAALSGTQHIKAELESARTQMEQARRAGDLNKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L      +        + +LL+ +V  EEIA+++SR TGIPVS++++
Sbjct: 500 ELQYGTIPALEKQLAAADSAE------GKEMSLLRNRVTDEEIAQVLSRATGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRV+GQ EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEELHKRVIGQGEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFMFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E +    
Sbjct: 674 ILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQENKDLGY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA IQL  L  ++ +    + 
Sbjct: 734 EGMKEIVMSVVGQHFRPEFINRIDETVVFHPLAKENIKAIAQIQLARLTKRMEQHGYAIN 793

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
            S+  L  IS +G+D +YGAR +   K+++   +     ++P A  I  G L+   P ++
Sbjct: 794 FSETLLDFISEVGYDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLLPAKPVTV 845

Query: 674 D 674
           D
Sbjct: 846 D 846


>gi|254524598|ref|ZP_05136653.1| ATP-dependent chaperone ClpB [Stenotrophomonas sp. SKA14]
 gi|219722189|gb|EED40714.1| ATP-dependent chaperone ClpB [Stenotrophomonas sp. SKA14]
          Length = 859

 Score =  801 bits (2070), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/661 (58%), Positives = 520/661 (78%), Gaps = 24/661 (3%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIIN EVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIINDEVPEGLRGKRVLSLDMGALIAGAKFRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ ++  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 258 KGVLNDLAKSEGQIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL++KY VHHGVEITDPAIVAA+ LS R
Sbjct: 318 RKYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKEKYAVHHGVEITDPAIVAAATLSNR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA+++++EIDSKPE +D+LERR+IQLKI+ E +K+E DE+S++
Sbjct: 378 YITDRQLPDKAIDLMDEAASRLRMEIDSKPEELDRLERRVIQLKIQREMLKKEKDEASRQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+ LE ++++L +IWK EK  ++ + +IKE++E+ +L +  A R+ D+  +S
Sbjct: 438 RLADLENDIDALEREFSDLNEIWKSEKAALQGATKIKEQVEQAKLDLESAQRRQDFARMS 497

Query: 314 KLKYGELNKLERIL---KEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSK 370
           +++YG L +LE+ L   +E   KD         F L++ +V  EEIAE+VSR TGIPV+K
Sbjct: 498 EIQYGLLPQLEKQLAAAQEAEHKD---------FKLVQDRVTDEEIAEVVSRWTGIPVNK 548

Query: 371 IVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVG 430
           +++ ER+KLL +E +L  RVVGQ+EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVG
Sbjct: 549 MLEGERDKLLRMEEVLHNRVVGQEEAIKVVSDAVRRSRAGLSDPNRPAGSFLFLGPTGVG 608

Query: 431 KTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKP 490
           KTELCK+L+  +F++ +++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+P
Sbjct: 609 KTELCKSLAEFLFDSADAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRP 668

Query: 491 YSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK 550
           YSLILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I++M  
Sbjct: 669 YSLILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQDMSA 728

Query: 551 GDKE----IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLL 606
            D       +K AVM  V+ +FRPEFINR+DDI+VF  L+++ I  IA IQ+  L+ +L 
Sbjct: 729 DDSPEAYTQMKAAVMGVVQAHFRPEFINRLDDIVVFHPLDKQQIKQIARIQMRGLEKRLA 788

Query: 607 KMNMDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
           +  + L +S AA   + N+GFD +YGAR +   K+++   L     ++P A  I  G  +
Sbjct: 789 ERGLKLVVSDAAFDLLGNVGFDPVYGARPL---KRAIQAQL-----ENPLAQKILSGAFV 840

Query: 667 N 667
           N
Sbjct: 841 N 841


>gi|88707050|ref|ZP_01104746.1| Chaperone clpB [Congregibacter litoralis KT71]
 gi|88698700|gb|EAQ95823.1| Chaperone clpB [Congregibacter litoralis KT71]
          Length = 862

 Score =  801 bits (2070), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/623 (61%), Positives = 508/623 (81%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQR+INGEVP  L  K+IL LD+  LLAGTK+RGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRVINGEVPEGLRDKRILSLDLGALLAGTKFRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 258 KALLNELSKEEGRVILFIDEIHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLNEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQY+EKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV+ITD AI+AA++LS R
Sbjct: 318 RQYVEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVDITDSAIIAAAQLSQR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+LERRLIQLKIE EA++++ DES+ K
Sbjct: 378 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEALDRLERRLIQLKIEREAVRKDEDESATK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           +L L+ ++I  +E ++A+LE+IWK EK  ++ +  +K +IE+++L +  A R  D   +S
Sbjct: 438 QLALLDEQITAIEKEFADLEEIWKAEKASLQGAASVKSDIEQLKLDLETARRAGDLTRMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE+ L +      Q   N  + TLL+ KV  EE+AE+VSR TGIP+SK+++
Sbjct: 498 ELQYGKLPELEKQLAQA-----QAAENVER-TLLRNKVTDEEVAEVVSRWTGIPISKMLE 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            +R+KLL +E+ L  RVVGQDEA+ AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GDRDKLLRMEDALHDRVVGQDEAVVAVANAVRRSRAGLSDPHRPNGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL
Sbjct: 612 LCKALADFLFDSEQAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSL 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+E+  GD+
Sbjct: 672 LLLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIQEL-AGDQ 730

Query: 554 --EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             + +K AVM  V  +FRPEFINR+D+ +VF  L ++ I  IA IQL  L+ +L +  M 
Sbjct: 731 NYDAMKAAVMGVVSQHFRPEFINRVDETVVFHPLLQEQIRGIATIQLAGLRARLGEREMA 790

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L I+ A + ++   GFD +YGAR
Sbjct: 791 LDITDAFMDQLVEGGFDPVYGAR 813


>gi|165976510|ref|YP_001652103.1| ATP-dependent Clp protease subunit B [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|307261568|ref|ZP_07543236.1| hypothetical protein appser12_11290 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|165876611|gb|ABY69659.1| ATP-dependant Clp protease chain B [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|306868691|gb|EFN00500.1| hypothetical protein appser12_11290 [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 857

 Score =  801 bits (2070), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/661 (57%), Positives = 526/661 (79%), Gaps = 12/661 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 258 KAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 318 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++
Sbjct: 378 YISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+   E +Y+ LE++WK EK+ +  +Q IK E+E  R+++++A R+++++ +S
Sbjct: 438 RLAKLDEELTAREREYSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L E  +++ +   N     LL+TKV  EEIAE++S+ TGIPVSK+++
Sbjct: 498 ELQYGKIPALEKQLHEAVKREEEGSEN----QLLRTKVTEEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L  RV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+E  + D 
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L + +I +IA IQL  L  +L +   ++ 
Sbjct: 734 AGMKEVVMSVVGQHFRPEFINRIDETVVFHPLGQAHIRAIARIQLQRLIARLAERGYEVT 793

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
           ++ AAL  I   GFD ++GAR +   K+++   L     ++P A  I  G L+   P  +
Sbjct: 794 VTDAALDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLAQQILSGKLLPNSPVVV 845

Query: 674 D 674
           D
Sbjct: 846 D 846


>gi|388600531|ref|ZP_10158927.1| hypothetical protein VcamD_11584 [Vibrio campbellii DS40M4]
          Length = 857

 Score =  801 bits (2070), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 507/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E DE+S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALSNENDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+N+ E +YA LE++W  EK  +  +Q IK E+E+ R+ ++ A R  D   +S
Sbjct: 440 RLDVLNEELNEKEREYAELEEVWNAEKAALSGTQHIKGELEQARMDMDFARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIA+++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIADVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  VSNAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEEVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVLIMTSNLGSARIQENFATLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L  ++ +    L
Sbjct: 734 YQGIKNEVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLERLAKRIEEKGYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S+ AL  I+ +GFD +YGAR
Sbjct: 794 EVSEKALDLIAQVGFDPVYGAR 815


>gi|257454777|ref|ZP_05620028.1| ATP-dependent chaperone protein ClpB [Enhydrobacter aerosaccus
           SK60]
 gi|257447710|gb|EEV22702.1| ATP-dependent chaperone protein ClpB [Enhydrobacter aerosaccus
           SK60]
          Length = 865

 Score =  801 bits (2070), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/622 (58%), Positives = 508/622 (81%), Gaps = 1/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQ+I+NG+VP  L +K++L LD+  L+AG K+RGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQKIVNGDVPEGLRNKRVLSLDLGALIAGAKFRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ ++  +I+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 257 KAVLNDLAKSEGQVILFIDEIHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+ +S R
Sbjct: 317 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVDIQDSAIIAAARMSNR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA+++K+E+DSKPE + KL+ RLIQLK++ E +K E DE +K 
Sbjct: 377 YITDRMLPDKAIDLVDEAASRLKMELDSKPEALGKLDSRLIQLKMQRETLKHEDDEGAKS 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           +L L+  +I++LE +YA+L +IW+ EK L+K SQQ+K+E++K R+   KA R+ D++T+S
Sbjct: 437 QLKLLDTQISELEKEYADLNEIWQAEKALVKGSQQLKDELDKARIAYEKAQREGDYETMS 496

Query: 314 KLKYGELNKLERILKEKS-QKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIV 372
           KL+Y  + +LE+ +K+    +  +    A    LL+ KV   EIAE+V+  TGIPV+K++
Sbjct: 497 KLQYETIPQLEKRIKDSDLAEQKEQAGEAPSVKLLRNKVTENEIAEVVAAATGIPVAKMM 556

Query: 373 QVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKT 432
           Q EREK+L++E  L +RVVGQDEA+ AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKT
Sbjct: 557 QGEREKMLHMEEKLHERVVGQDEAVQAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKT 616

Query: 433 ELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYS 492
           EL K L++ +F++E ++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRR+PYS
Sbjct: 617 ELTKALASFLFDDENAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRRPYS 676

Query: 493 LILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGD 552
           ++L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+I+MTSNLGS KI+EM    
Sbjct: 677 VVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIIMTSNLGSHKIQEMAGDS 736

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E IK AVMN V  +FRPEF+NRID+I+VF  L ++ +  IA+IQL+ L+ +L + +M++
Sbjct: 737 YEEIKAAVMNSVNQHFRPEFVNRIDEIVVFHPLGQEQMAGIADIQLSRLRKRLQERDMNI 796

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +S  A+ ++  +G+D +YGAR
Sbjct: 797 VLSDEAMSQLVAVGYDPVYGAR 818


>gi|167856244|ref|ZP_02478978.1| chaperone ClpB [Haemophilus parasuis 29755]
 gi|167852631|gb|EDS23911.1| chaperone ClpB [Haemophilus parasuis 29755]
          Length = 857

 Score =  801 bits (2070), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 513/622 (82%), Gaps = 5/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 258 KAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 318 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++
Sbjct: 378 YISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +++   E +YA LE++WK EK+ +  +Q IK E+E  R+++++A R+++++ +S
Sbjct: 438 RLAKLDEDLTAREREYAELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L+E  +++ +   N     LL+TKV  EEIAE++S+ +GIPVSK+++
Sbjct: 498 ELQYGKIPALEKQLQEAVKREEEGGEN----HLLRTKVTDEEIAEVLSKASGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEVLHKRVIGQSEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFLFDDQDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+E  E   
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENAENMS 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  VMN V  +FRPEFINRID+ +VF  L+++NI +IA IQL  L  ++ +   ++
Sbjct: 734 YDEMKTIVMNVVGQHFRPEFINRIDETVVFHPLDKENIRAIARIQLERLIKRMAERGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            ++ AA+  I   GFD ++GAR
Sbjct: 794 TVTDAAVDHIGEAGFDPLFGAR 815


>gi|303253337|ref|ZP_07339486.1| hypothetical protein APP2_0648 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|302648019|gb|EFL78226.1| hypothetical protein APP2_0648 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
          Length = 857

 Score =  801 bits (2070), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/661 (57%), Positives = 526/661 (79%), Gaps = 12/661 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 258 KAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 318 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++
Sbjct: 378 YISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+   E +Y+ LE++WK EK+ +  +Q IK E+E  R+++++A R+++++ +S
Sbjct: 438 RLAKLDEELTAREREYSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L E  +++ +   N     LL+TKV  EEIAE++S+ TGIPVSK+++
Sbjct: 498 ELQYGKIPALEKQLHEAVKREEEGSEN----QLLRTKVTEEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L  RV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+E  + D 
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L + +I +IA IQL  L  +L +   ++ 
Sbjct: 734 AGMKEVVMSVVGQHFRPEFINRIDETVVFHPLGQAHIRAIARIQLQRLIARLAERGYEVT 793

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
           ++ AAL  I   GFD ++GAR +   K+++   L     ++P A  I  G L+   P  +
Sbjct: 794 VTNAALDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLAQQILSGKLLPNSPVVV 845

Query: 674 D 674
           D
Sbjct: 846 D 846


>gi|303250165|ref|ZP_07336367.1| hypothetical protein APP6_1581 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307252723|ref|ZP_07534614.1| hypothetical protein appser6_12370 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|302651228|gb|EFL81382.1| hypothetical protein APP6_1581 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306859755|gb|EFM91777.1| hypothetical protein appser6_12370 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
          Length = 857

 Score =  801 bits (2070), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/661 (57%), Positives = 526/661 (79%), Gaps = 12/661 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 258 KAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 318 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++
Sbjct: 378 YISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+   E +Y+ LE++WK EK+ +  +Q IK E+E  R+++++A R+++++ +S
Sbjct: 438 RLAKLDEELTAREREYSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L E  +++ +   N     LL+TKV  EEIAE++S+ TGIPVSK+++
Sbjct: 498 ELQYGKIPALEKQLHEAVKREEEGSEN----QLLRTKVTEEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L  RV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+E  + D 
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L + +I +IA IQL  L  +L +   ++ 
Sbjct: 734 AGMKEVVMSVVGQHFRPEFINRIDETVVFHPLGQAHIRAIARIQLQRLIARLAERGYEVT 793

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
           ++ AAL  I   GFD ++GAR +   K+++   L     ++P A  I  G L+   P  +
Sbjct: 794 VTDAALDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLAQQILSGKLLPNSPVVV 845

Query: 674 D 674
           D
Sbjct: 846 D 846


>gi|387121076|ref|YP_006286959.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|416032186|ref|ZP_11572737.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
           serotype a str. H5P1]
 gi|416045010|ref|ZP_11575193.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
           serotype d str. I63B]
 gi|429732491|ref|ZP_19267101.1| ATP-dependent chaperone protein ClpB [Aggregatibacter
           actinomycetemcomitans Y4]
 gi|347995838|gb|EGY36981.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
           serotype d str. I63B]
 gi|348000240|gb|EGY41029.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
           serotype a str. H5P1]
 gi|385875568|gb|AFI87127.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|429155999|gb|EKX98641.1| ATP-dependent chaperone protein ClpB [Aggregatibacter
           actinomycetemcomitans Y4]
          Length = 856

 Score =  801 bits (2069), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/621 (59%), Positives = 502/621 (80%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+++E D++S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  +Q IK E+E  R ++ +A R  D   +S
Sbjct: 440 RLEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIKAELENARTQMEQARRAGDLSKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L +    +        + +LL+ +V  EEIAE++SR TGIPV+K+++
Sbjct: 500 ELQYGKIPDLEKQLAQAEGAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVAKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEFLHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALASFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E  +   
Sbjct: 674 ILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHAQEGY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K  VM  V  YFRPEFINRID+ ++F  LN++NI  IA+IQL  L  ++      L 
Sbjct: 734 DTVKSMVMEVVGRYFRPEFINRIDETVMFHPLNKENIRQIADIQLRRLTRRMETHGYVLN 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  IS+IG+D I+GAR
Sbjct: 794 FTDATLDFISDIGYDPIFGAR 814


>gi|416068136|ref|ZP_11582660.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
           serotype f str. D18P1]
 gi|348001380|gb|EGY42128.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
           serotype f str. D18P1]
          Length = 856

 Score =  801 bits (2069), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/621 (59%), Positives = 502/621 (80%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+++E D++S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  +Q IK E+E  R ++ +A R  D   +S
Sbjct: 440 RLEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIKAELENARTQMEQARRAGDLSKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L +    +        + +LL+ +V  EEIAE++SR TGIPV+K+++
Sbjct: 500 ELQYGKIPDLEKQLAQAEGAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVAKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEFLHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALASFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E  +   
Sbjct: 674 ILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHAQEGY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K  VM  V  YFRPEFINRID+ ++F  LN++NI  IA+IQL  L  ++      L 
Sbjct: 734 DTVKSMVMEVVGRYFRPEFINRIDETVMFHPLNKENIRQIADIQLRRLTRRMETHGYVLN 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  IS+IG+D I+GAR
Sbjct: 794 FTDATLDFISDIGYDPIFGAR 814


>gi|148828042|ref|YP_001292795.1| DNA polymerase I [Haemophilus influenzae PittGG]
 gi|148719284|gb|ABR00412.1| DNA polymerase I [Haemophilus influenzae PittGG]
          Length = 856

 Score =  801 bits (2069), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/621 (59%), Positives = 503/621 (80%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  SQ IK+E++  + ++ +A R  D   +S
Sbjct: 440 RLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L++    +        + TLL+ +V  EEIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPALEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L KRV+GQ+EA+ AV+NAIRR R+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEDELHKRVIGQEEAVDAVANAIRRRRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  +    
Sbjct: 674 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA+IQL  L  ++     +L 
Sbjct: 734 SEMKALVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELV 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D IYGAR
Sbjct: 794 FTDALLDFIGEVGYDPIYGAR 814


>gi|415765950|ref|ZP_11482887.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
           D17P-3]
 gi|348653689|gb|EGY69376.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
           D17P-3]
          Length = 680

 Score =  801 bits (2069), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/621 (59%), Positives = 502/621 (80%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 24  NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 83

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 84  KAVLNELAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 143

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 144 RQYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 203

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+++E D++S+K
Sbjct: 204 YISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRK 263

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  +Q IK E+E  R ++ +A R  D   +S
Sbjct: 264 RLEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIKAELENARTQMEQARRAGDLSKMS 323

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L +    +        + +LL+ +V  EEIAE++SR TGIPV+K+++
Sbjct: 324 ELQYGKIPDLEKQLAQAEGAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVAKMME 377

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 378 GEKEKLLRMEEFLHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 437

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 438 LCKALASFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 497

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E  +   
Sbjct: 498 ILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHAQEGY 557

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K  VM  V  YFRPEFINRID+ ++F  LN++NI  IA+IQL  L  ++      L 
Sbjct: 558 DTVKSMVMEVVGRYFRPEFINRIDETVMFHPLNKENIRQIADIQLRRLTRRMETHGYVLN 617

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  IS+IG+D I+GAR
Sbjct: 618 FTDATLDFISDIGYDPIFGAR 638


>gi|416077717|ref|ZP_11586018.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
           serotype b str. SCC1398]
 gi|348003902|gb|EGY44453.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
           serotype b str. SCC1398]
          Length = 856

 Score =  801 bits (2069), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/621 (59%), Positives = 503/621 (80%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+++E D++S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  +Q IK E+E  R ++ +A R  D   +S
Sbjct: 440 RLEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIKAELENARTQMEQARRAGDLSKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L +    +        + +LL+ +V  EEIAE++SR TGIPV+K+++
Sbjct: 500 ELQYGKIPDLEKQLAQAEGAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVAKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL++E  L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLHMEEFLHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALASFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++  +   
Sbjct: 674 ILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQDHAQEGY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K  VM  V  YFRPEFINRID+ ++F  LN++NI  IA+IQL  L  ++      L 
Sbjct: 734 DTVKSMVMEVVGRYFRPEFINRIDETVMFHPLNKENIRQIADIQLRRLTRRMETHGYVLN 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  IS+IG+D I+GAR
Sbjct: 794 FTDATLDFISDIGYDPIFGAR 814


>gi|240949095|ref|ZP_04753443.1| ATP-dependant Clp protease chain B [Actinobacillus minor NM305]
 gi|240296490|gb|EER47122.1| ATP-dependant Clp protease chain B [Actinobacillus minor NM305]
          Length = 857

 Score =  801 bits (2069), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/661 (57%), Positives = 525/661 (79%), Gaps = 12/661 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 258 KAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 318 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++
Sbjct: 378 YISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+   E +Y+ LE++WK EK+ +  +Q IK E+E  R+ + +A R+S+ + + 
Sbjct: 438 RLAKLDEELTAKEREYSELEEVWKAEKSALLGTQHIKTELENARIALEQARRESNLEKMG 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L+E  +++ +  +N     LL+TKV  EEIAE++S+ TGIPVSK+++
Sbjct: 498 ELQYGKIPALEKQLQEAVKREEEGGDN----HLLRTKVTDEEIAEVLSKATGIPVSKMIE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +EN+L  RV+GQ+EA+ AV+NAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 GEKDKLLRMENVLHTRVIGQNEAVEAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+EM     
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQEMPNASY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L +++I SIA IQL  L  ++ +   ++ 
Sbjct: 734 GELKEVVMSVVSQHFRPEFINRIDETVVFHSLGQEHIRSIARIQLERLIKRMAERGYEVT 793

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
           I+ AA+  I   GFD ++GAR +   K+++   L     ++P A  I  G L+   P  +
Sbjct: 794 ITDAAIDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLAQQILGGKLLPNRPVVV 845

Query: 674 D 674
           D
Sbjct: 846 D 846


>gi|422641872|ref|ZP_16705293.1| AAA ATPase, central region, partial [Pseudomonas syringae Cit 7]
 gi|330954257|gb|EGH54517.1| AAA ATPase, central region [Pseudomonas syringae Cit 7]
          Length = 793

 Score =  801 bits (2069), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/601 (63%), Positives = 493/601 (82%), Gaps = 7/601 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI +LE++YA+LE+IW  EK  +  S QI+++IE+ R ++  A R+ D   ++
Sbjct: 440 RLEKLQGEIQRLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E LL  RV+GQ+EA+ AVSNA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GEREKLLRMETLLHNRVIGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSL
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEF+NRID++++F  L R  I  I +IQL  L+ +L +  + L 
Sbjct: 733 EAQRAAVMDAVGTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELLLN 792

Query: 614 I 614
           I
Sbjct: 793 I 793


>gi|410614264|ref|ZP_11325313.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
           psychrophila 170]
 gi|410166186|dbj|GAC39202.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
           psychrophila 170]
          Length = 856

 Score =  801 bits (2068), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/621 (61%), Positives = 500/621 (80%), Gaps = 7/621 (1%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAI EGLAQRIIN EVP  L +K++L LD+  L+AG K+RGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIAEGLAQRIINSEVPEGLKNKRVLSLDMGSLIAGAKFRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L E+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYR
Sbjct: 261 AVLNELSKEEGRVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLNEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           QYIEKDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+RY
Sbjct: 321 QYIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAASLSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           ISDR +PDKAIDLIDEAA+ I++++DSKPE MDKLERR+IQLK+E +A+ +E DE+S KR
Sbjct: 381 ISDRQLPDKAIDLIDEAASSIRLQMDSKPEDMDKLERRIIQLKLEEQALSKEKDEASHKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L LI+ E  + E K++  E IW  EK  ++ +Q I+ E+E+ +L +  A R SD   +S+
Sbjct: 441 LELIELEREQAEHKFSAFETIWIAEKQAMQGTQTIRSELEQAKLDLEIARRASDLSRMSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG + +LE  L+  ++ + Q      + TLLK KV   EIA+++SR TGIPVSK+++ 
Sbjct: 501 LQYGRIPELEAKLEVATESETQ------ETTLLKNKVTESEIADVLSRWTGIPVSKMLEG 554

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           E+ KLL +E  L KRVVGQ EA++AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTEL
Sbjct: 555 EKVKLLAMEEALHKRVVGQSEAVTAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTEL 614

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CKTL+  +F+ E +++RIDMSEF+EKHS++R++GAPPGY+GYEEGGYLTE VRRKPYS+I
Sbjct: 615 CKTLANFLFDTENAMVRIDMSEFMEKHSVARMVGAPPGYVGYEEGGYLTEAVRRKPYSVI 674

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDK 553
           LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E+  + + 
Sbjct: 675 LLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEVSGESNY 734

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K  VMN V  +FRPEF+NR+DDI+VF  L ++ I +IA IQL  L+ +L +    L+
Sbjct: 735 QQMKGLVMNAVGEHFRPEFLNRVDDIVVFHPLGKEQIKAIAKIQLCSLRERLAEKGYKLE 794

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL KI++ GFD +YGAR
Sbjct: 795 LSLEALDKIADAGFDPVYGAR 815


>gi|404402810|ref|ZP_10994394.1| chaperone [Pseudomonas fuscovaginae UPB0736]
          Length = 854

 Score =  801 bits (2068), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/621 (61%), Positives = 509/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KALLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEDDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++++I++LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLDKLQEDISRLEREYSDLEEIWASEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  ++  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGHSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+LL +RV+GQ EA+ AV+NA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GEREKLLKMESLLHQRVIGQSEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT++VMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVVVMTSNLGSVQIQEL-AGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+ +L +  + L 
Sbjct: 733 EAQRAAVMDALGSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRGRLAERELSLA 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSDEALDKLIAVGYDPVYGAR 813


>gi|398964715|ref|ZP_10680492.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM30]
 gi|398148101|gb|EJM36789.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM30]
          Length = 854

 Score =  801 bits (2068), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/621 (61%), Positives = 511/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KALLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAMK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIVRLEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  ++  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KL+ +E+LL +RV+GQDEA+ AV+NA+RRSR+GL+D  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLMKMESLLHQRVIGQDEAVVAVANAVRRSRAGLADPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSSQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  + L+
Sbjct: 733 EAQRAAVMDALTSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELKLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+ K+  +G+D +YGAR
Sbjct: 793 LSPEAMDKLIAVGYDPVYGAR 813


>gi|237801872|ref|ZP_04590333.1| clpB protein [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331024730|gb|EGI04786.1| clpB protein [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 854

 Score =  801 bits (2068), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/621 (62%), Positives = 506/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGSLIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVEAQALKKEKDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI +LE++YA+LE+IW  EK  +  S QI+++IE+ R ++  A R+ D   ++
Sbjct: 440 RLEKLQGEIERLELEYADLEEIWTSEKAEVTGSAQIQQKIEQSRQELEAARRRGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q     P N     LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLQMVDQHG--KPEN----QLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E LL  RV+GQDEA+ AV+NA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLLRMETLLHNRVIGQDEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEF+NRID++++F  L R  I  I +IQL  L+ +L +  + + 
Sbjct: 733 EAQRAAVMDAVSTHFRPEFVNRIDEVVIFEPLARDQIAGITDIQLGRLRKRLAERELTMV 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLIAVGYDPVYGAR 813


>gi|325577681|ref|ZP_08147956.1| chaperone protein ClpB [Haemophilus parainfluenzae ATCC 33392]
 gi|325160426|gb|EGC72552.1| chaperone protein ClpB [Haemophilus parainfluenzae ATCC 33392]
          Length = 856

 Score =  801 bits (2068), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/621 (59%), Positives = 502/621 (80%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE++  E +YA LE++WK EK  +  SQ IK+E++  + ++ +A R  D   +S
Sbjct: 440 RLEMLEKELSDKEREYAELEEVWKSEKAALSGSQHIKQELDAAKTEMEQARRAGDLSKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L               + +LL+ +V  EEIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLAAAE------TGEGKEMSLLRYRVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  +    
Sbjct: 674 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKNESY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA+IQL  L  ++     +L 
Sbjct: 734 GEMKALVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELV 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            ++A L  I  +G+D IYGAR
Sbjct: 794 FTEALLDFIGEVGYDPIYGAR 814


>gi|261867258|ref|YP_003255180.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|415767634|ref|ZP_11483306.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
           D17P-2]
 gi|261412590|gb|ACX81961.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|348658570|gb|EGY76138.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
           D17P-2]
          Length = 856

 Score =  801 bits (2068), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/621 (59%), Positives = 503/621 (80%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+++E D++S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  +Q IK E+E  R ++ +A R  D   +S
Sbjct: 440 RLEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIKAELENARTQMEQARRAGDLSKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L +    +        + +LL+ +V  EEIAE++SR TGIPV+K+++
Sbjct: 500 ELQYGKIPDLEKQLAQAEGAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVAKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL++E  L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLHMEEFLHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALASFLFDSEDAMMRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++  +   
Sbjct: 674 ILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQDHAQEGY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K  VM  V  YFRPEFINRID+ ++F  LN++NI  IA+IQL  L  ++      L 
Sbjct: 734 DTVKSMVMEVVGRYFRPEFINRIDETVMFHPLNKENIRQIADIQLRRLTRRMETHGYVLN 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  IS+IG+D I+GAR
Sbjct: 794 FTDATLDFISDIGYDPIFGAR 814


>gi|148826496|ref|YP_001291249.1| ATP-dependent chaperone ClpB [Haemophilus influenzae PittEE]
 gi|229845911|ref|ZP_04466023.1| ClpB [Haemophilus influenzae 7P49H1]
 gi|148716656|gb|ABQ98866.1| ClpB [Haemophilus influenzae PittEE]
 gi|229810915|gb|EEP46632.1| ClpB [Haemophilus influenzae 7P49H1]
          Length = 856

 Score =  801 bits (2068), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/621 (59%), Positives = 503/621 (80%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  SQ IK+E++  + ++ +A R  D   +S
Sbjct: 440 RLEMLEKELVEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L++    +        + TLL+ +V  EEIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPALEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP  SF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEDELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPISSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  +    
Sbjct: 674 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA+IQL  L  ++     +L 
Sbjct: 734 SEMKALVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELV 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D IYGAR
Sbjct: 794 FTDALLDFIGEVGYDPIYGAR 814


>gi|429334365|ref|ZP_19215031.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
           putida CSV86]
 gi|428760942|gb|EKX83190.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Pseudomonas
           putida CSV86]
          Length = 854

 Score =  800 bits (2067), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/621 (61%), Positives = 507/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KALLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKEDDEAALK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +EI +LE +YA+LE++W  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLTEEIARLEREYADLEEVWTSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLSRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +      LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKADNQLLRNKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+LL +RV+GQ+EA+ AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLKMESLLHERVIGQEEAVVAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+++  GD+
Sbjct: 674 VLLDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSAQIQDL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEFINRID+++VF  L R  I  I  IQL  L+++L +  + L+
Sbjct: 733 EAQRAAVMDAVGAHFRPEFINRIDEVVVFEPLGRDQIAGITQIQLGRLRSRLAERELSLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL K+  +G+D +YGAR
Sbjct: 793 LSPEALDKLIAVGYDPVYGAR 813


>gi|419846184|ref|ZP_14369441.1| ATP-dependent chaperone protein ClpB [Haemophilus parainfluenzae
           HK2019]
 gi|386414479|gb|EIJ29035.1| ATP-dependent chaperone protein ClpB [Haemophilus parainfluenzae
           HK2019]
          Length = 856

 Score =  800 bits (2067), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/621 (59%), Positives = 500/621 (80%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+   E +YA LE++WK EK  +  SQ IK+E++  + ++ +A R  D   +S
Sbjct: 440 RLDMLEKELADKEREYAELEEVWKSEKATLSGSQHIKQELDAAKTEMEQARRAGDLSKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L               + TLL+ +V  EEIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLAAAE------TGEGKEMTLLRYRVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  +    
Sbjct: 674 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKDESY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L + NI +IA+IQL  L  ++     +L 
Sbjct: 734 GEMKALVMSVVSQHFRPEFINRIDETVVFHPLGKDNIRAIASIQLERLAKRMETRGYELV 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            ++A L  I  +G+D IYGAR
Sbjct: 794 FTEALLDFIGEVGYDPIYGAR 814


>gi|77359882|ref|YP_339457.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Pseudoalteromonas
           haloplanktis TAC125]
 gi|76874793|emb|CAI86014.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 858

 Score =  800 bits (2067), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/623 (61%), Positives = 507/623 (81%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLK+E  A+ +E DE+S K
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASLK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R   +++ I +LE +Y  L++IW  EK  ++ +Q IK E+E+ RL ++ A R SD Q +S
Sbjct: 440 RRTEMQELITELEGEYNELDEIWTAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L   SQ ++Q      + TLLK +VG +EIAEI+SR TGIPVS+++Q
Sbjct: 500 ELQYGRIPELERKLDLASQAEMQ------EMTLLKNQVGEDEIAEILSRWTGIPVSRMLQ 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L ++V+GQDEA+ AV+NAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEEKLHEKVIGQDEAVVAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ E +++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LTKALAGYMFDTESAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E + G+ 
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQE-QAGNN 732

Query: 554 EIIKL--AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           + + L   VMN +   FRPEFINRID+ +VF  L  ++I  IA+IQL+ L+ +L +M   
Sbjct: 733 DYVTLKEKVMNVLINEFRPEFINRIDETVVFHPLANEHIKEIADIQLSKLRERLTQMGYL 792

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L+IS AAL++I+  GFD +YGAR
Sbjct: 793 LEISDAALERIAASGFDPVYGAR 815


>gi|223041973|ref|ZP_03612157.1| chaperone ClpB [Actinobacillus minor 202]
 gi|223017230|gb|EEF15658.1| chaperone ClpB [Actinobacillus minor 202]
          Length = 857

 Score =  800 bits (2067), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/661 (57%), Positives = 524/661 (79%), Gaps = 12/661 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 258 KAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 318 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++
Sbjct: 378 YISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+   E +Y+ LE++WK EK+ +  +Q IK E+E  R+ + +A R+S+ + + 
Sbjct: 438 RLAKLDEELTAKEREYSELEEVWKAEKSALLGTQHIKTELENARIALEQARRESNLEKMG 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L+E  +++ +  +N     LL+TKV  EEIAE++S+ TGIPVSK+++
Sbjct: 498 ELQYGKIPALEKQLQEAVKREEEGGDN----HLLRTKVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +EN+L  RV+GQ+EA+ AV+NAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 GEKDKLLRMENVLHTRVIGQNEAVEAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+EM     
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQEMPNASY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L +++I SIA IQL  L  ++ +   ++ 
Sbjct: 734 GELKEVVMSVVSQHFRPEFINRIDETVVFHSLGQEHIRSIARIQLERLIKRMAERGYEVT 793

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
           I+ AA+  I   GFD  +GAR +   K+++   L     ++P A  I  G L+   P  +
Sbjct: 794 ITDAAIDHIGKAGFDPFFGARPL---KRAIQQEL-----ENPLAQQILGGKLLPNKPVVV 845

Query: 674 D 674
           D
Sbjct: 846 D 846


>gi|307250341|ref|ZP_07532290.1| hypothetical protein appser4_11220 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|307254986|ref|ZP_07536804.1| hypothetical protein appser9_12200 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|307259422|ref|ZP_07541147.1| hypothetical protein appser11_12190 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306857616|gb|EFM89723.1| hypothetical protein appser4_11220 [Actinobacillus pleuropneumoniae
           serovar 4 str. M62]
 gi|306861859|gb|EFM93835.1| hypothetical protein appser9_12200 [Actinobacillus pleuropneumoniae
           serovar 9 str. CVJ13261]
 gi|306866358|gb|EFM98221.1| hypothetical protein appser11_12190 [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 857

 Score =  800 bits (2067), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/661 (57%), Positives = 526/661 (79%), Gaps = 12/661 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 258 KAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 318 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++
Sbjct: 378 YISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+   E +Y+ LE++WK EK+ +  +Q IK E+E  R+++++A R+++++ +S
Sbjct: 438 RLAKLDEELTAREREYSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L E  +++ +   N     LL+TKV  EEIAE++S+ TGIPVSK+++
Sbjct: 498 ELQYGKIPALEKQLHEAVKREEEGSEN----QLLRTKVTEEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L  RV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+E  + D 
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L + +I +IA IQL  L  +L +   ++ 
Sbjct: 734 AGMKEVVMSVVGQHFRPEFINRIDETVVFHPLGQAHIRAIARIQLQRLIARLAERGYEVT 793

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
           ++ AAL  I   GFD ++GAR +   K+++   L     ++P +  I  G L+   P  +
Sbjct: 794 VTDAALDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLSQQILSGKLLPNSPVVV 845

Query: 674 D 674
           D
Sbjct: 846 D 846


>gi|94498969|ref|ZP_01305507.1| ATPase with chaperone activity, ATP-binding subunit [Bermanella
           marisrubri]
 gi|94428601|gb|EAT13573.1| ATPase with chaperone activity, ATP-binding subunit [Oceanobacter
           sp. RED65]
          Length = 870

 Score =  800 bits (2067), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/632 (60%), Positives = 513/632 (81%), Gaps = 17/632 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIG PGVGKTAI+EGLAQRI++GEVP  L +K+IL LD+  LLAG K+RG+FE+RL
Sbjct: 198 NNPVLIGAPGVGKTAIIEGLAQRIVDGEVPEGLRNKRILSLDMGSLLAGAKFRGDFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S  + +I++FIDE+HTM+G GK +G++DAGNMLKP LSRGELHC+GATTL+EY
Sbjct: 258 KNVLKEVSKQEGNIVLFIDEIHTMVGAGKTDGALDAGNMLKPALSRGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP  E+T++ILRGL+++YEVHHGV+ITD AI+AA++LS R
Sbjct: 318 REYIEKDAALERRFQKVLVDEPSEEDTVAILRGLKERYEVHHGVQITDGAIIAAAKLSTR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I++EIDSKP+ MD+LERRLIQLKIE EA+ +E DE SKK
Sbjct: 378 YITDRQLPDKAIDLIDEAASIIRMEIDSKPQEMDRLERRLIQLKIEREALNKESDEGSKK 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  I  EINKL  +Y  LE +WK EK  ++ S+Q KE +E+ ++++ +A R  D Q +S
Sbjct: 438 RLNEINGEINKLGREYVELEDVWKQEKLSLEGSKQAKEALEEAKVEMEQARRAGDLQRMS 497

Query: 314 KLKYGELNKLERILK--EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +L+YG++ +LE+ ++  EK++K       +N+F LL+ +V  EEIAE+VS+ TG+PV+K+
Sbjct: 498 ELQYGKIPELEKQIEAAEKAEK------GSNEFKLLRNRVTDEEIAEVVSKWTGVPVAKM 551

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ EREKLL +E  L K VVGQD+AI+AVSNA+RRSR+GLSD ++P GSF+FLGPTGVGK
Sbjct: 552 LEGEREKLLRMEQELHKHVVGQDDAITAVSNAVRRSRAGLSDPRKPNGSFLFLGPTGVGK 611

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F+++++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPY
Sbjct: 612 TELCKALATFMFDSQDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEHVRRKPY 671

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--- 548
           S+ILLDE+EKA+ DVFNILLQ+LDDG+LTD +GRT++F+NT++VMTSNLGSD I+ M   
Sbjct: 672 SVILLDEVEKAHPDVFNILLQVLDDGQLTDGQGRTVDFKNTVLVMTSNLGSDVIQTMSHH 731

Query: 549 ----EKGDKEI--IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILK 602
               E+ D E   +K AVM  V  +FRPEFINRID+++VF  L +  I  IA IQL  L+
Sbjct: 732 NQGEEQTDTEYEEMKSAVMEIVGGHFRPEFINRIDEVVVFHPLQKSQIQGIAQIQLQELE 791

Query: 603 NKLLKMNMDLKISKAALKKISNIGFDLIYGAR 634
            +L +  + L++S  A+ ++  +G+D +YGAR
Sbjct: 792 KRLKERELSLQLSDEAINRLVEVGYDPVYGAR 823


>gi|398850111|ref|ZP_10606819.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM80]
 gi|398986108|ref|ZP_10691379.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM24]
 gi|399011818|ref|ZP_10714148.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM16]
 gi|398117402|gb|EJM07154.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM16]
 gi|398152896|gb|EJM41406.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM24]
 gi|398249473|gb|EJN34859.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM80]
          Length = 854

 Score =  800 bits (2067), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/621 (61%), Positives = 510/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLKGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSLLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAMK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI +LE +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIVRLEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  ++  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KL+ +E+LL KRV+GQ+EA+ AV+NA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLMKMESLLHKRVIGQEEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSVQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+ +L +  + L+
Sbjct: 733 EAQRAAVMDALTSHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRTRLAERELKLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+ K+  +G+D +YGAR
Sbjct: 793 LSPEAMDKLIAVGYDPVYGAR 813


>gi|348028567|ref|YP_004871253.1| ClpB protein [Glaciecola nitratireducens FR1064]
 gi|347945910|gb|AEP29260.1| ClpB protein [Glaciecola nitratireducens FR1064]
          Length = 856

 Score =  800 bits (2066), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/622 (61%), Positives = 504/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGSLLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGKVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V++P +E+TI+ILRGL+++YE+HH V ITDPAIVAA+ LS R
Sbjct: 320 RQYIEKDAALERRFQKVQVDQPSVEDTIAILRGLKERYELHHSVNITDPAIVAAARLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKP+ MDKLERR+IQLK+E +A+ +E D +S K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPDEMDKLERRIIQLKLEEQALSKETDTASLK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I+ E  +LE K+ +L+KIW+ EK  ++ +Q IK E+E+ +L +  A R SD   +S
Sbjct: 440 RLEVIEIEREQLEQKFGDLDKIWRAEKNAMQGTQFIKGELEQAKLDLEIARRASDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE  L++ S+ DI       +  L+K KV   EIA+++SR TGIPVSK++ 
Sbjct: 500 ELQYGRIPELELKLEQASESDIM------ETQLIKNKVTENEIADVLSRWTGIPVSKMLD 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KL+++E+ + KRV+GQ EA+ AVSNAIRRSR+GL+D  +P GSF+FLGPTGVGKTE
Sbjct: 554 SEKDKLVSMEDTIGKRVIGQREAVVAVSNAIRRSRAGLADPDKPTGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+ E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKSLANFLFDTEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK-EMEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+   +   
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTLIIMTSNLGSDIIQGHTDDST 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E +K  VM EV  +FRPEFINR+DDI+VF  L R+ I SIA IQL  L+ +L +M + L
Sbjct: 734 YEEMKKQVMVEVSAHFRPEFINRVDDIVVFHSLGREEIKSIAKIQLLGLRQRLQEMGLKL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +IS AAL  I++ GFD +YGAR
Sbjct: 794 EISGAALDIIADAGFDPVYGAR 815


>gi|319897647|ref|YP_004135844.1| protein disaggregation chaperone [Haemophilus influenzae F3031]
 gi|317433153|emb|CBY81527.1| protein disaggregation chaperone [Haemophilus influenzae F3031]
          Length = 856

 Score =  800 bits (2066), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/621 (59%), Positives = 503/621 (80%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSK E +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKSEPLDRLERRIIQLKLEQQALQKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  SQ IK+E++  + ++ +A R  D   +S
Sbjct: 440 RLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L++         +   + TLL+ +V  EEIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPALEKQLEQAE------TSEGKEMTLLRYRVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEELHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  ++   
Sbjct: 674 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKEESY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA+IQL  L  ++     +L 
Sbjct: 734 SEMKALVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELV 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D IYGAR
Sbjct: 794 FTDALLDFIGEVGYDPIYGAR 814


>gi|319775209|ref|YP_004137697.1| protein disaggregation chaperone [Haemophilus influenzae F3047]
 gi|317449800|emb|CBY86008.1| protein disaggregation chaperone [Haemophilus influenzae F3047]
          Length = 856

 Score =  800 bits (2066), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/621 (59%), Positives = 502/621 (80%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  SQ IK+E++  + ++ +A R  D   +S
Sbjct: 440 RLEMLEKELAEKEREYAELEEVWKSEKATLSGSQHIKQELDTAKTELEQARRAGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L++    +        + TLL+ +V  EEIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPALEKQLEQAETSE------GKEMTLLRYRVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEELHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  +    
Sbjct: 674 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKDESY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA+IQL  L  ++     +L 
Sbjct: 734 SEMKALVMSVVSQHFRPEFINRIDETVVFHPLGKENIRAIASIQLERLAKRMETRGYELV 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            +   L  I  +G+D IYGAR
Sbjct: 794 FTDDLLDFIGEVGYDPIYGAR 814


>gi|410622643|ref|ZP_11333474.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
           pallidula DSM 14239 = ACAM 615]
 gi|410157836|dbj|GAC28848.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
           pallidula DSM 14239 = ACAM 615]
          Length = 858

 Score =  800 bits (2066), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/622 (62%), Positives = 505/622 (81%), Gaps = 5/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  LLAG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGSLLAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G G  EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGKVILFIDELHTMVGAGAGEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V++P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVQVDQPSVEDTIAILRGLKERYELHHSVDITDPAIVAAANLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE MDKLERR+IQLK+E +A+ +E D SS K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEEMDKLERRIIQLKLEEQALSKETDTSSLK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I+ E  +LE K+A L+KIW+ EK+ ++ +Q IK E+E+ +L +  A R SD   +S
Sbjct: 440 RLEVIEIEREQLEQKFAELDKIWRAEKSAMQGTQFIKAELEQAKLDLEIARRASDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE  LK +   + +   NA +  LLK KV  +EIA+++SR TGIPVSK+++
Sbjct: 500 ELQYGRIPELE--LKLEQANETETETNATR--LLKNKVTEKEIADVLSRWTGIPVSKMLE 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KL+++E+++ KRVVGQ EA+ AVSNAI+RSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 556 GEKDKLIHMEDIIGKRVVGQKEAVVAVSNAIKRSRAGLSDPDKPTGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+ E+++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKSLANFLFDTEDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD  GRT+NF+NT+I+MTSNLGS+ I+       
Sbjct: 676 ILLDEVEKAHPDVFNILLQVLDDGRLTDGHGRTVNFKNTLIIMTSNLGSEIIQNHTDDST 735

Query: 554 EI-IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            I +K  VM EV  +FRPEFINR+DDI+VF  L R+ I SIA IQL  L+ +L +M + L
Sbjct: 736 YIEMKQQVMAEVSTHFRPEFINRVDDIVVFHSLGREEIKSIAKIQLVGLRQRLQEMGLKL 795

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +IS AAL  I+  GFD +YGAR
Sbjct: 796 EISAAALDIIAEAGFDPVYGAR 817


>gi|419801894|ref|ZP_14327097.1| ATP-dependent chaperone protein ClpB [Haemophilus parainfluenzae
           HK262]
 gi|385192261|gb|EIF39667.1| ATP-dependent chaperone protein ClpB [Haemophilus parainfluenzae
           HK262]
          Length = 856

 Score =  800 bits (2066), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/621 (59%), Positives = 501/621 (80%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE++  E +YA LE++WK EK  +  SQ IK+E++  + ++ +A R  D   +S
Sbjct: 440 RLDMLEKELSDKEREYAELEEVWKSEKAALSGSQHIKQELDAAKTEMEQARRAGDLSKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L               + +LL+ +V  EEIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLAAAE------TGEGKEMSLLRYRVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  +    
Sbjct: 674 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKDESY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L + NI +IA+IQL  L  ++     +L 
Sbjct: 734 GEMKALVMSVVSQHFRPEFINRIDETVVFHPLGKDNIRAIASIQLERLAKRMETRGYELV 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            ++A L  I  +G+D IYGAR
Sbjct: 794 FTEALLDFIGEVGYDPIYGAR 814


>gi|407692736|ref|YP_006817525.1| ATP-dependent Clp protease subunit B [Actinobacillus suis H91-0380]
 gi|407388793|gb|AFU19286.1| ATP-dependent Clp protease subunit B [Actinobacillus suis H91-0380]
          Length = 857

 Score =  800 bits (2066), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/661 (57%), Positives = 525/661 (79%), Gaps = 12/661 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 258 KAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 318 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++
Sbjct: 378 YISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+   E +Y+ LE++WK EK+ +  +Q IK E+E  R+++++A R+S+++ +S
Sbjct: 438 RLAKLDEELTAREREYSELEEVWKAEKSALLGTQHIKTELEYARIEMDQARRESNFEKMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L E  +++ +   N     LL+TKV  EEIAE++S+ TGIPVSK+++
Sbjct: 498 ELQYGKIPALEKQLAEAVKREEEGGEN----QLLRTKVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L  RV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F + ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFLFEDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+E  + D 
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L +++I +IA IQL  L  +L +   ++ 
Sbjct: 734 ASMKEVVMSVVGQHFRPEFINRIDETVVFHPLGQEHIRAIARIQLQRLIARLAERGYEVT 793

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
           ++  AL  I   GFD ++GAR +   K+++   L     ++P A  I  G L+   P  +
Sbjct: 794 VTDNALDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLAQQILSGKLLPNSPVVV 845

Query: 674 D 674
           D
Sbjct: 846 D 846


>gi|260912679|ref|ZP_05919165.1| ATP-dependent chaperone ClpB [Pasteurella dagmatis ATCC 43325]
 gi|260633057|gb|EEX51222.1| ATP-dependent chaperone ClpB [Pasteurella dagmatis ATCC 43325]
          Length = 855

 Score =  800 bits (2065), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/621 (59%), Positives = 500/621 (80%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 259 KAVLNELAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 319 RQYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKP+ +D+LERR+IQLK+E +A+++E D++S+K
Sbjct: 379 YISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDDASRK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE +WK EK  +  +Q IK E++  + ++ +A R SD+  +S
Sbjct: 439 RLEMLEKELGEKEREYAELEDVWKAEKAALSGTQHIKAELDNAKTQMEQARRASDFAKMS 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L +    +        + TLL+ +V  EEIAE++SR TGIPV+K+++
Sbjct: 499 ELQYGVIPTLEKQLAQAESAE------GKEMTLLRHRVTDEEIAEVLSRATGIPVAKMME 552

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L KRV+GQ EAI AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 553 GEKEKLLRMEDELHKRVIGQHEAIEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 612

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 613 LCKTLANFLFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 672

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+E ++ D 
Sbjct: 673 ILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENKEADY 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA IQL  L  ++      L 
Sbjct: 733 DSMKALVMSVVGQHFRPEFINRIDETVVFHPLGKENIRAIATIQLQRLIKRMESHGYQLH 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D IYGAR
Sbjct: 793 FTDACLDFIGEVGYDPIYGAR 813


>gi|54310128|ref|YP_131148.1| clpB, ATPase with chaperone activity [Photobacterium profundum SS9]
 gi|46914567|emb|CAG21346.1| putative clpB, ATPases with chaperone activity [Photobacterium
           profundum SS9]
          Length = 861

 Score =  800 bits (2065), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/622 (60%), Positives = 506/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IG+PGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 204 NNPVIIGQPGVGKTAIVEGLAQRIVNGEVPEGLRHKRVLSLDMGSLIAGAKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 264 KSVLNELSQEEGSVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 324 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAARLSHR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLKIE +A+ +E D +S+K
Sbjct: 384 YVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKIEQQALSKESDAASQK 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  I +E++  E +YA LE++W  EK  +  +Q IK E+E+ R+ +  A R  D   +S
Sbjct: 444 RLNDICEELDVKEREYAELEEVWNAEKAALSGTQHIKSELEQARMNMEVARRAGDLNRMS 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q ++Q      + +LLK KV   EIAE++S+ TGIPV+K+++
Sbjct: 504 ELQYGKIPELEKQLDLAAQAEMQ------EMSLLKNKVTDAEIAEVLSKQTGIPVAKMLE 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLRMEDELHQRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 618 LCKTLANFMFDSEDNMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD+I+E     +
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDRIQENFGNLN 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E IK  V+  V  YFRPEFINR+D+ +VF  L ++NI  IA+IQ+  L N+L + + +L
Sbjct: 738 YEGIKNMVLEVVSQYFRPEFINRVDETVVFHPLGQENIKHIASIQIERLVNRLKEKDYEL 797

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            + ++AL  ++  GFD +YGAR
Sbjct: 798 TVQESALDFVAKAGFDPVYGAR 819


>gi|399543782|ref|YP_006557090.1| chaperone protein ClpB [Marinobacter sp. BSs20148]
 gi|399159114|gb|AFP29677.1| Chaperone protein ClpB [Marinobacter sp. BSs20148]
          Length = 858

 Score =  800 bits (2065), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/623 (59%), Positives = 507/623 (81%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIG+PGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGDPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++  +  II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLKELTKQEGQIILFIDEIHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R++IEKDAA ERRFQK+LV+EP  E+T++ILRGL+++YEVHHGVEITD AI+AA++LS R
Sbjct: 320 RKHIEKDAALERRFQKVLVDEPSEEDTVAILRGLKERYEVHHGVEITDSAIIAAAKLSSR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEA ++I++E+DSKPE +D+LERRLIQLKIE EA+K+E D +SKK
Sbjct: 380 YIADRKLPDKAIDLVDEAGSQIRMEMDSKPEPLDRLERRLIQLKIEREALKKETDPASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +   I+ +E +YA+LE++W  EK  +  SQ+IK E+E+ R ++  A R  D   +S
Sbjct: 440 RLEELSSVIDGVEREYADLEEVWNAEKAALHGSQKIKSELEQARTELESARRAGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L   SQ ++       + TLL+ +V  EEIAEIVS+ TGIPVSK+++
Sbjct: 500 ELQYGHIPELERQLDMASQAEMM------EMTLLRNRVTEEEIAEIVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KL+ +E  L KRV+GQ+EA+ AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLMRMEEALHKRVIGQNEAVEAVANAVRRSRAGLSDPHRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F+ +++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALASFLFDTDDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I+    G++
Sbjct: 674 LLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSGIIQR-HAGEE 732

Query: 554 --EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             + +K  VM+EV  +FRPEFINR+D+++VF  L    I  IA +Q+ +L  +L + ++ 
Sbjct: 733 NYDAMKALVMDEVGTHFRPEFINRVDEVVVFHPLEANQIRGIAKVQIELLDKRLRQQDIA 792

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L++ ++A+  ++N+G+D +YGAR
Sbjct: 793 LELDESAMTLLANVGYDPVYGAR 815


>gi|386288476|ref|ZP_10065617.1| ATPase [gamma proteobacterium BDW918]
 gi|385278492|gb|EIF42463.1| ATPase [gamma proteobacterium BDW918]
          Length = 862

 Score =  799 bits (2064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/622 (61%), Positives = 510/622 (81%), Gaps = 8/622 (1%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  LLAG K+RG+FE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDLGALLAGAKFRGDFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L E+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEYR
Sbjct: 261 AVLNELSKEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLNEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           Q IEKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHHGV+ITD AI+AA++LS RY
Sbjct: 321 QSIEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHGVDITDSAIIAATKLSQRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DR +PDKAIDLIDEAA++I++EIDSKPE+MDKLERRLIQLKI+ EA+K++ D ++KK+
Sbjct: 381 ITDRQLPDKAIDLIDEAASRIRMEIDSKPEVMDKLERRLIQLKIQREAVKKDDDLAAKKQ 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L ++  +I+K+E ++++L +IWK EK  ++ S QIK ++E+ +L++  A R  D   +S+
Sbjct: 441 LEILNADISKVEKEFSDLNEIWKGEKAALQGSAQIKVDLEQAKLELETARRAGDLTRMSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG++ +LE+ L      D           LL+ KV  EE+AE+VSR TGIP+SK+++ 
Sbjct: 501 LQYGKIPELEKQLATADAVD------HGAMQLLRNKVSEEEVAEVVSRWTGIPISKMLEG 554

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           ER+KLL +E+ L +RV+GQ EA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTEL
Sbjct: 555 ERDKLLRMEDELHQRVIGQSEAVDAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTEL 614

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK LS  ++++E++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL+
Sbjct: 615 CKALSMFLYDSEDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLL 674

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+EM     E
Sbjct: 675 LLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDVIQEMTVAGSE 734

Query: 555 IIKL--AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
             K+  AV+N V  +FRPEFINRID+++VF  L+R  + +IA IQL IL ++L +  + L
Sbjct: 735 YPKIRDAVLNVVSGHFRPEFINRIDELVVFEPLDRTQVQAIAGIQLGILNSRLAERELRL 794

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S+ AL ++++IGFD +YGAR
Sbjct: 795 EVSEEALDRLADIGFDPVYGAR 816


>gi|372267908|ref|ZP_09503956.1| ATP-dependent chaperone ClpB [Alteromonas sp. S89]
          Length = 868

 Score =  799 bits (2064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 388/632 (61%), Positives = 514/632 (81%), Gaps = 16/632 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  LLAG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKDKRLLSLDLGALLAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKQEGRIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV+ITD AI+AA++LS R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVDITDSAIIAATKLSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREY-DESSK 252
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE MDKLERRLIQLKIE EA+K++  DE++K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEEMDKLERRLIQLKIEREAVKKDKDDEAAK 439

Query: 253 KRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTV 312
           KRL  ++++I+++E +YA+LE+IWK EK  +  S  IK ++E+ +L ++ A R  D   +
Sbjct: 440 KRLEKLEEDIDQIEKEYADLEEIWKAEKAKLAGSADIKNKLEQAKLDMDAARRAGDLTRM 499

Query: 313 SKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIV 372
           S+++YG + +LE  LK  S       ++ ++  LL+ +V  EE+AE+VSR TGIPVSK++
Sbjct: 500 SEIQYGVIPQLEEQLKHASDS-----SDTSENQLLRNRVTDEEVAEVVSRWTGIPVSKML 554

Query: 373 QVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKT 432
           + EREKLL +E++L  RV+GQDEA+ AVSNA+RRSR+GL+D  RP GSF+FLGPTGVGKT
Sbjct: 555 EGEREKLLRMEDVLHNRVIGQDEAVEAVSNAVRRSRAGLADPNRPNGSFLFLGPTGVGKT 614

Query: 433 ELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYS 492
           ELCK L+  +F+ E++++R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS
Sbjct: 615 ELCKALAQFLFDTEDAMVRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYS 674

Query: 493 LILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG- 551
           ++LLDE+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT++VMTSNLGSD I++   G 
Sbjct: 675 VLLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVVVMTSNLGSDLIQKYASGR 734

Query: 552 -----DKEI----IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILK 602
                D EI    +K AVM+ V  +FRPEFINRID+++VF  L R+ + +IA IQL  L+
Sbjct: 735 DDDEIDSEIQYRQMKAAVMDVVGEHFRPEFINRIDEVVVFHPLGREEVRAIAEIQLQNLR 794

Query: 603 NKLLKMNMDLKISKAALKKISNIGFDLIYGAR 634
            +LL  ++ L+IS   L K++++GFD +YGAR
Sbjct: 795 KRLLDRDLKLEISDELLGKLADVGFDPVYGAR 826


>gi|54035760|sp|Q6LMY0.2|CLPB_PHOPR RecName: Full=Chaperone protein ClpB
          Length = 857

 Score =  799 bits (2064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/622 (60%), Positives = 506/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IG+PGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGQPGVGKTAIVEGLAQRIVNGEVPEGLRHKRVLSLDMGSLIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELSQEEGSVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAARLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLKIE +A+ +E D +S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKIEQQALSKESDAASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  I +E++  E +YA LE++W  EK  +  +Q IK E+E+ R+ +  A R  D   +S
Sbjct: 440 RLNDICEELDVKEREYAELEEVWNAEKAALSGTQHIKSELEQARMNMEVARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q ++Q      + +LLK KV   EIAE++S+ TGIPV+K+++
Sbjct: 500 ELQYGKIPELEKQLDLAAQAEMQ------EMSLLKNKVTDAEIAEVLSKQTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEDELHQRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFMFDSEDNMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD+I+E     +
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDRIQENFGNLN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E IK  V+  V  YFRPEFINR+D+ +VF  L ++NI  IA+IQ+  L N+L + + +L
Sbjct: 734 YEGIKNMVLEVVSQYFRPEFINRVDETVVFHPLGQENIKHIASIQIERLVNRLKEKDYEL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            + ++AL  ++  GFD +YGAR
Sbjct: 794 TVQESALDFVAKAGFDPVYGAR 815


>gi|387813183|ref|YP_005428664.1| ATP-dependent protease [Marinobacter hydrocarbonoclasticus ATCC
           49840]
 gi|381338194|emb|CCG94241.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Marinobacter
           hydrocarbonoclasticus ATCC 49840]
          Length = 859

 Score =  799 bits (2064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/623 (60%), Positives = 499/623 (80%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+ L  KK+L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKKVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KAVLNELSKQEGQIILFIDEIHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+ IEKDAA ERRFQK+LV EP  E+TI+ILRGL+++YEVHHGVE+TD AI+AA++LS+R
Sbjct: 320 RENIEKDAALERRFQKVLVSEPSEEDTIAILRGLKERYEVHHGVEVTDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++E+DSKPE +D+LERRLIQLKIE EA+K+E D +SKK
Sbjct: 380 YITDRQLPDKAIDLVDEAASQIRMEMDSKPEALDRLERRLIQLKIEREALKKETDAASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +   I  +E +YA+LE++W  EK  +  SQ+IK ++E+ R+ +  A R  D   +S
Sbjct: 440 RLEELSAVIGNVEREYADLEEVWNTEKAALHGSQKIKSQLEQARIDLENARRAGDLGKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LER L   SQ ++       +  LL+ +V  EEIAEIVS+ TGIPVSK+++
Sbjct: 500 ELQYGKIPELERQLDMASQAEMM------EMKLLRNRVTDEEIAEIVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KL+ +E  L  RV+GQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLMRMEEALHDRVIGQDEAVEAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT++VMTSNLGS  I+E + G++
Sbjct: 674 LLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSHIIQE-KAGEE 732

Query: 554 --EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E +K AVM  V  +FRPEFINR+D+++VF  L    I  IA IQ+  L  +L   +M 
Sbjct: 733 NYEDMKSAVMEVVGTHFRPEFINRVDEVVVFHPLAESQIQGIARIQIENLARRLKDQDMK 792

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L++    ++ ++ +G+D +YGAR
Sbjct: 793 LELGDDVMQLLAEVGYDPVYGAR 815


>gi|398980981|ref|ZP_10689213.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM25]
 gi|398134012|gb|EJM23188.1| ATP-dependent chaperone ClpB [Pseudomonas sp. GM25]
          Length = 854

 Score =  799 bits (2064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/621 (61%), Positives = 510/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP+ L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPDGLRGKRLLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KALLNELSKQEGQIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+LERRLIQLK+E +A+K+E DE++ K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLERRLIQLKVESQALKKESDEAAIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI + E +Y++LE+IW  EK  ++ S QI+++IE+ R ++  A RK D   ++
Sbjct: 440 RLEKLQEEIVRHEREYSDLEEIWNSEKAEVQGSAQIQQKIEQSRQELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +  ++  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGKSENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KL+ +E+LL +RV+GQDEA+ AV+NA+RRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 GERDKLMKMESLLHQRVIGQDEAVVAVANAVRRSRAGLSDPNRPSGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD+ GRT++FRNT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDSHGRTVDFRNTVIVMTSNLGSMQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ +  +FRPEFINR+D++++F  L R  I  I  IQL  L+++L +  + L+
Sbjct: 733 EAQRAAVMDAISTHFRPEFINRVDEVVIFEPLARDQIAGITEIQLGRLRSRLAERELKLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+ K+  +G+D +YGAR
Sbjct: 793 LSPEAMDKLIAVGYDPVYGAR 813


>gi|32035169|ref|ZP_00135209.1| COG0542: ATPases with chaperone activity, ATP-binding subunit
           [Actinobacillus pleuropneumoniae serovar 1 str. 4074]
 gi|126208559|ref|YP_001053784.1| chaperone ClpB [Actinobacillus pleuropneumoniae serovar 5b str.
           L20]
 gi|126097351|gb|ABN74179.1| chaperone ClpB [Actinobacillus pleuropneumoniae serovar 5b str.
           L20]
          Length = 857

 Score =  799 bits (2064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/661 (57%), Positives = 525/661 (79%), Gaps = 12/661 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 258 KAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 318 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++
Sbjct: 378 YISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+   E +Y+ LE++WK EK+ +  +Q IK E+E  R+++++A R+++++ +S
Sbjct: 438 RLAKLDEELTAREREYSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L E  +++ +   N     LL+TKV  EEIAE++S+ TGIPVSK+++
Sbjct: 498 ELQYGKIPALEKQLHEAVKREEEGSEN----QLLRTKVTEEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L  RV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE  RR+PYS+
Sbjct: 614 LCKTLANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAARRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+E  + D 
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L + +I +IA IQL  L  +L +   ++ 
Sbjct: 734 AGMKEVVMSVVGQHFRPEFINRIDETVVFHPLGQAHIRAIARIQLQRLIARLAERGYEVT 793

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
           ++ AAL  I   GFD ++GAR +   K+++   L     ++P +  I  G L+   P  +
Sbjct: 794 VTDAALDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLSQQILSGKLLPNSPVVV 845

Query: 674 D 674
           D
Sbjct: 846 D 846


>gi|167625158|ref|YP_001675452.1| ATPase [Shewanella halifaxensis HAW-EB4]
 gi|167355180|gb|ABZ77793.1| ATPase AAA-2 domain protein [Shewanella halifaxensis HAW-EB4]
          Length = 857

 Score =  799 bits (2064), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/623 (60%), Positives = 500/623 (80%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIIN EVP  + +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINNEVPEGIKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 260 KAVLNELSQEEGQVILFIDELHTMVGAGKSDGAMDAGNMLKPALARGDLHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAASMSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR IQLK+E +A+ +E DE+S +
Sbjct: 380 YISDRKLPDKAIDLIDEAASSIRIQIDSKPESLDRLERRAIQLKLEEQALSKEADEASLR 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ E+  +E K A L +IW+ EK  +  +Q IK ++E+ R+ +  A R  D   +S
Sbjct: 440 RLDVLRAELKDVEAKAAELNEIWRTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   SQ ++Q        TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLASQAEMQ------DMTLLRNKVTDVEIAEVLSKATGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RV+GQ+EA+++VSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLKMEDALHERVIGQNEAVNSVSNAIRRSRAGLSDPDRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAKFLFDTESALVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I +M  G +
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI-QMGFGKQ 732

Query: 554 --EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             + +K  VM  V   FRPEF+NRID+ +VF  L+ KNI  IA IQ+  LK +L + +  
Sbjct: 733 TYDEMKFDVMQVVTQNFRPEFLNRIDEAVVFHPLHEKNIAHIAAIQIEGLKQRLAEKDYG 792

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L+ISK AL  I+ +GFD IYGAR
Sbjct: 793 LEISKDALSFIARVGFDPIYGAR 815


>gi|307257140|ref|ZP_07538912.1| hypothetical protein appser10_11400 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306864302|gb|EFM96213.1| hypothetical protein appser10_11400 [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 857

 Score =  799 bits (2063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/661 (57%), Positives = 527/661 (79%), Gaps = 12/661 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 258 KAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 318 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++
Sbjct: 378 YISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+   E +Y+ LE++WK EK+ +  +Q IK E+E  R+++++A R+++++ +S
Sbjct: 438 RLAKLDEELTAREREYSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L E  +++ +   N     LL+TKV  EEIAE++S+ TGIPVSK+++
Sbjct: 498 ELQYGKIPALEKQLAEAVKREEEGGEN----QLLRTKVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L  RV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+E  + D 
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L +++I +IA IQL  L  +L +   ++ 
Sbjct: 734 AGMKEVVMSVVGQHFRPEFINRIDETVVFHPLGQEHIRAIARIQLQRLIARLAERGYEVT 793

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
           ++ +AL  I   GFD ++GAR +   K+++   L     ++P +  I  G L+   P  +
Sbjct: 794 VTDSALDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLSQQILSGKLLPNSPVVV 845

Query: 674 D 674
           D
Sbjct: 846 D 846


>gi|392556409|ref|ZP_10303546.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Pseudoalteromonas undina
           NCIMB 2128]
          Length = 858

 Score =  799 bits (2063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/622 (60%), Positives = 502/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+R
Sbjct: 320 RKYIEKDAALERRFQKVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLKIE  A+ +E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRLQIDSKPEALDKLERRIIQLKIEDNALAKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R   + + I +LE++Y  L+++W  EK  ++ +Q IK E+E+ RL +  A R SD Q +S
Sbjct: 440 RRAEMVELITELEVQYRELDEVWNAEKASLQGTQVIKAELEQARLDLEVARRASDLQRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L   SQ ++Q      + +LLK +VG +EIAEI+SR TGIPV++++Q
Sbjct: 500 ELQYGRIPELERKLDLASQAEMQ------EMSLLKNQVGEDEIAEILSRWTGIPVARMLQ 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  +V+GQDEA+ AV+NAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEEQLHNKVIGQDEAVVAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ E +++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LTKALAGYMFDTESAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E     D
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQSGSND 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  VM  +   FRPEFINRID+ +VF  L   +I  IA+IQL+ L+ +L +M   L
Sbjct: 734 YDELKAKVMGVLHNEFRPEFINRIDETVVFHSLAHSHIKEIADIQLSKLRERLTEMGYLL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +++ AAL++I+  GFD +YGAR
Sbjct: 794 ELTDAALERIAASGFDPVYGAR 815


>gi|221135104|ref|ZP_03561407.1| ATPase AAA-2 [Glaciecola sp. HTCC2999]
          Length = 859

 Score =  799 bits (2063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 500/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGNVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+L+++P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLIDQPTVEDTIAILRGLKERYELHHSVDITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE MDKL+RR+IQLK+E +A+ +E DE+S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEEMDKLDRRIIQLKLEEQALAKESDEASLK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I+ E    E +Y  LE IW  EK  ++ +Q IK ++E+ +  ++ A R  D   +S
Sbjct: 440 RLDIIQVERETAESRYKALETIWLTEKDAMQGAQGIKAQLEQAKQDMDIARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L+  +  D   P       L+K KV   EIA+++SR TGIPV+K+++
Sbjct: 500 ELQYGRIPALEQQLENANTADEVTPQ------LVKNKVTDVEIADVLSRWTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KL+ +E +L  RV+GQDEA+  VSNAIRRSR+GL+D  +P GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLVRMETVLHDRVIGQDEAVKCVSNAIRRSRAGLADPAKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F++++S++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKSLADFLFDSQDSMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDVIQEQAHQQD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K +VMN V ++FRPEFINR+DDI+VF  L   NI SIA IQL  L+ +L     +L
Sbjct: 734 YDAMKASVMNTVAMHFRPEFINRVDDIVVFHPLALDNIKSIAKIQLQGLRQRLQDKGFEL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS AAL KI+++GFD ++GAR
Sbjct: 794 SISGAALNKIADVGFDPVFGAR 815


>gi|409202084|ref|ZP_11230287.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Pseudoalteromonas
           flavipulchra JG1]
          Length = 857

 Score =  799 bits (2063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/622 (61%), Positives = 500/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L SK++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKSKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHSVDITDPAIVAAANLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I+++IDSKPE +D+LERR+IQLK+E  A+ +E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRLQIDSKPEQLDRLERRIIQLKLEDNALAKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R   ++  IN+LE +Y  L+++W  EK  ++ +Q IK E+E+ RL +  A R SD Q +S
Sbjct: 440 RRTEMQTLINELEAEYRELDEVWNAEKASLQGTQVIKAELEQARLDLEVARRASDLQRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L   SQ ++Q      + +LLK +VG +EIAEI+SR TGIPV+K++Q
Sbjct: 500 ELQYGRIPELERKLDLASQAEMQ------EMSLLKNQVGEDEIAEILSRWTGIPVAKMLQ 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L K+V+GQDEA++AV+NAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEDELHKKVIGQDEAVNAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LTKALANFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+N +I+MTSNLGSD I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNAVIIMTSNLGSDVIQEQAGNND 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  +   FRPEFINRID+ +VF  L  ++I  IA+IQL+ L  +L +    L
Sbjct: 734 YATLKERVMAVLASQFRPEFINRIDETVVFHPLINEHIKEIASIQLDRLSKRLTEKGFAL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S AAL KI+  GFD +YGAR
Sbjct: 794 ELSDAALDKIAASGFDPVYGAR 815


>gi|399521946|ref|ZP_10762611.1| ATPase [Pseudomonas pseudoalcaligenes CECT 5344]
 gi|399109981|emb|CCH39171.1| ATPase [Pseudomonas pseudoalcaligenes CECT 5344]
          Length = 854

 Score =  799 bits (2063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/623 (61%), Positives = 511/623 (82%), Gaps = 11/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+   +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELGKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE+++K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I KLE +YA+LE+IWK EK  ++ S QI+++IE+ + ++  A RK D   ++
Sbjct: 440 RLEKLEDDIAKLEKEYADLEEIWKSEKAEVQGSAQIQQKIEQAKTELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKF--TLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +L+YG +  LER L        Q+ +   K    LL+ KV  EEIAE+VS+ TGIPVSK+
Sbjct: 500 ELQYGIIPDLERSL--------QMVDAHGKAENQLLRNKVTDEEIAEVVSKWTGIPVSKM 551

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ EREKLL +E+LL +RV+GQ EA+ AV+NA+RRSR+GL+D  RP GSF+FLGPTGVGK
Sbjct: 552 LEGEREKLLKMEDLLHQRVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGK 611

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TELCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPY
Sbjct: 612 TELCKALAEFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPY 671

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           S++L+DE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  G
Sbjct: 672 SVVLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQEL-VG 730

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           DKE  + AVM+ V  +FRPEFINRID+++VF  L R+ I  IA IQL  L+++L +  + 
Sbjct: 731 DKEAQRAAVMDAVGSHFRPEFINRIDEVVVFEPLGREQIAGIAEIQLQRLRSRLAERELS 790

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L+++  AL K+  +G+D +YGAR
Sbjct: 791 LELTPEALDKLIAVGYDPVYGAR 813


>gi|120599936|ref|YP_964510.1| ATPase [Shewanella sp. W3-18-1]
 gi|146292128|ref|YP_001182552.1| ATPase [Shewanella putrefaciens CN-32]
 gi|120560029|gb|ABM25956.1| ATPase AAA-2 domain protein [Shewanella sp. W3-18-1]
 gi|145563818|gb|ABP74753.1| ATPase AAA-2 domain protein [Shewanella putrefaciens CN-32]
          Length = 857

 Score =  799 bits (2063), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/661 (58%), Positives = 518/661 (78%), Gaps = 21/661 (3%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  + +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGSLIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 260 KAVLNELSQEEGQVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATMSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR IQLK+E +A+ +E DE+S++
Sbjct: 380 YVSDRKLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRAIQLKLEEQALAKENDEASRR 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++E+  +E K + L +IW+ EK  +  +Q IK ++E+ R+ +  A R  D   +S
Sbjct: 440 RLDHLQEELRDVEAKASELNEIWRTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   SQ ++Q        TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLASQAEMQ------DMTLLRNKVTEFEIAEVLSKATGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQ+EA+ AV+NAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEVALHERVIGQNEAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+ E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKSLARFLFDTESALVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E   G  
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDIIQE---GFG 730

Query: 554 EI----IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
           ++    +K AVMN V   FRPEF+NRID+ +VF  L+  NI  IA+IQ+  L+ +L + +
Sbjct: 731 QVTYAEMKAAVMNVVTHSFRPEFLNRIDESVVFHPLDAANIKRIASIQIASLRQRLAEKD 790

Query: 610 MDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKG 669
             L+I+  AL  I+ IGFD +YGAR +   K++L     +   ++P A  +  GDL+   
Sbjct: 791 YTLEITDEALSLIAEIGFDPVYGARPL---KRAL-----QQEVENPLAQKLLRGDLLPGK 842

Query: 670 P 670
           P
Sbjct: 843 P 843


>gi|307263757|ref|ZP_07545363.1| hypothetical protein appser13_11680 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|306870878|gb|EFN02616.1| hypothetical protein appser13_11680 [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 857

 Score =  798 bits (2062), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/661 (57%), Positives = 527/661 (79%), Gaps = 12/661 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 258 KAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 318 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++
Sbjct: 378 YISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+   E +Y+ LE++WK EK+ +  +Q IK E+E  R+++++A R+++++ +S
Sbjct: 438 RLAKLDEELTAREREYSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L E  +++ +   N     LL+TKV  EEIAE++S+ TGIPVSK+++
Sbjct: 498 ELQYGKIPALEKQLAEAVKREEEGGEN----QLLRTKVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L  RV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+E  + D 
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L +++I +IA IQL  L  +L +   ++ 
Sbjct: 734 AGMKEVVMSVVGQHFRPEFINRIDETVVFHPLGQEHIRAIARIQLQRLIARLAERGYEVT 793

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
           ++ +AL  I   GFD ++GAR +   K+++   L     ++P +  I  G L+   P  +
Sbjct: 794 VTDSALDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLSQQILSGKLLPNSPVVV 845

Query: 674 D 674
           D
Sbjct: 846 D 846


>gi|409397138|ref|ZP_11248076.1| ClpB protein [Pseudomonas sp. Chol1]
 gi|409118298|gb|EKM94698.1| ClpB protein [Pseudomonas sp. Chol1]
          Length = 854

 Score =  798 bits (2062), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/621 (61%), Positives = 511/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE+++K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEALDRLDRRLIQLKIEREALKKEDDEATRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I KLE +YA+LE+IWK EK  ++ S Q++++IE+ +  +  A RK D   ++
Sbjct: 440 RLAKLEDDIAKLEKEYADLEEIWKSEKAEVQGSAQLQQKIEQAKADLEAARRKGDLARMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLQMVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E++L +RV+GQ EA+ AV+NA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEDMLHQRVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L+DE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GD 
Sbjct: 674 VLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSMQIQEL-VGDP 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           +  + AVM+ V  +FRPEFINRID+++VF  L R+ I  IA+IQL  L+ +L +  + L+
Sbjct: 733 DAQRAAVMDAVGHHFRPEFINRIDEVVVFDPLAREQIAGIADIQLARLRKRLAERELSLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +++ A+ K+  +G+D +YGAR
Sbjct: 793 LTQEAMDKLIAVGYDPVYGAR 813


>gi|359440613|ref|ZP_09230527.1| ATP-dependent Clp protease ATP-binding subunit ClpB
           [Pseudoalteromonas sp. BSi20429]
 gi|358037648|dbj|GAA66776.1| ATP-dependent Clp protease ATP-binding subunit ClpB
           [Pseudoalteromonas sp. BSi20429]
          Length = 858

 Score =  798 bits (2062), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/622 (61%), Positives = 503/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+R
Sbjct: 320 RKYIEKDAALERRFQKVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLK+E  A+ +E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R   +++ I  L+ +Y  L++IW  EK  ++ +Q IK E+E+ RL ++ A R SD Q +S
Sbjct: 440 RRAEMQELITDLDGQYRELDEIWNAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L   SQ ++Q      + TLLK +VG +EIAEI+SR TGIPV++++Q
Sbjct: 500 ELQYGRIPELERKLDLASQAEMQ------EMTLLKNQVGEDEIAEILSRWTGIPVARMLQ 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L  +V+GQDEA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEDKLHSKVIGQDEAVVAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LTKALAGFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E     D
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGNND 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  +   FRPEFINRID+ +VF  L  ++I  IA+IQL  L+ +L +M   L
Sbjct: 734 YTTLKAKVMEVLINEFRPEFINRIDETVVFHPLANEHIKEIADIQLMKLRERLTEMGYLL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +IS AAL++I+  GFD +YGAR
Sbjct: 794 EISDAALERIAESGFDPVYGAR 815


>gi|120553812|ref|YP_958163.1| ATPase [Marinobacter aquaeolei VT8]
 gi|120323661|gb|ABM17976.1| ATPase AAA-2 domain protein [Marinobacter aquaeolei VT8]
          Length = 859

 Score =  798 bits (2062), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/623 (60%), Positives = 499/623 (80%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+ L  KK+L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKKVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KAVLNELSKQEGQIILFIDEIHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+ IEKDAA ERRFQK+LV EP  E+TI+ILRGL+++YEVHHGVE+TD AI+AA++LS+R
Sbjct: 320 RENIEKDAALERRFQKVLVSEPSEEDTIAILRGLKERYEVHHGVEVTDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++E+DSKPE +D+LERRLIQLKIE EA+K+E D +SKK
Sbjct: 380 YITDRQLPDKAIDLVDEAASQIRMEMDSKPEALDRLERRLIQLKIEREALKKETDAASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +   I  +E +YA+LE++W  EK  +  SQ+IK ++E+ R+ +  A R  D   +S
Sbjct: 440 RLEELSAVIGNVEREYADLEEVWNTEKAALHGSQKIKSQLEQARIDLENARRAGDLGKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LER L   SQ ++       +  LL+ +V  EEIAEIVS+ TGIPVSK+++
Sbjct: 500 ELQYGKIPELERQLDMASQAEMM------EMKLLRNRVTDEEIAEIVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KL+ +E  L  RV+GQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLMRMEEALHDRVIGQDEAVEAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT++VMTSNLGS  I+E + G++
Sbjct: 674 LLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSHIIQE-KAGEE 732

Query: 554 --EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E +K AVM  V  +FRPEFINR+D+++VF  L    I  IA IQ+  L  +L   +M 
Sbjct: 733 NYEDMKSAVMEVVGSHFRPEFINRVDEVVVFHPLAESQIQGIARIQIENLARRLKDQDMK 792

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L++    ++ ++ +G+D +YGAR
Sbjct: 793 LELGDDVMQLLAEVGYDPVYGAR 815


>gi|359432252|ref|ZP_09222642.1| ATP-dependent Clp protease ATP-binding subunit ClpB
           [Pseudoalteromonas sp. BSi20652]
 gi|357921104|dbj|GAA58891.1| ATP-dependent Clp protease ATP-binding subunit ClpB
           [Pseudoalteromonas sp. BSi20652]
          Length = 858

 Score =  798 bits (2061), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/622 (61%), Positives = 503/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+R
Sbjct: 320 RKYIEKDAALERRFQKVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLK+E  A+ +E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R   +++ I  L+ +Y  L++IW  EK  ++ +Q IK E+E+ RL ++ A R SD Q +S
Sbjct: 440 RRAEMQELITDLDGQYRELDEIWNAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L   SQ ++Q      + TLLK +VG +EIAEI+SR TGIPV++++Q
Sbjct: 500 ELQYGRIPELERKLDLASQAEMQ------EMTLLKNQVGEDEIAEILSRWTGIPVARMLQ 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L  +V+GQDEA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEDKLHSKVIGQDEAVVAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LTKALAGFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E     D
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGNND 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  +   FRPEFINRID+ +VF  L  ++I  IA+IQL  L+ +L +M   L
Sbjct: 734 YTTLKAKVMEVLINEFRPEFINRIDETVVFHPLANEHIKEIADIQLMKLRERLTEMGYLL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +IS AAL++I+  GFD +YGAR
Sbjct: 794 EISDAALERIAESGFDPVYGAR 815


>gi|148978564|ref|ZP_01815016.1| ClpB protein [Vibrionales bacterium SWAT-3]
 gi|145962353|gb|EDK27634.1| ClpB protein [Vibrionales bacterium SWAT-3]
          Length = 857

 Score =  798 bits (2061), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 503/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  + +II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELSKEEGNIILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E DE+S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALTNENDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ E++  E  +A LE++W  EK  +  +Q IK E+E+ R+ ++ A R  D   +S
Sbjct: 440 RLRTLQAELSDKERDFAELEEVWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIA+++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDAEIADVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  VSNAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLKMEGVLHKRVIGQGEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+++++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFMFDSDDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFNTLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM  V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  LK ++     +L
Sbjct: 734 YQGIKNEVMEVVGKHFRPEFLNRVDESVVFHPLGQEHIQSIASIQLEHLKKRMEDNGYEL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S+ ALK IS +GFD +YGAR
Sbjct: 794 EVSEKALKLISQVGFDPVYGAR 815


>gi|402306300|ref|ZP_10825350.1| ATP-dependent chaperone protein ClpB [Haemophilus sputorum HK 2154]
 gi|400375371|gb|EJP28273.1| ATP-dependent chaperone protein ClpB [Haemophilus sputorum HK 2154]
          Length = 858

 Score =  798 bits (2061), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/661 (56%), Positives = 526/661 (79%), Gaps = 12/661 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 259 KAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 319 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++
Sbjct: 379 YISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQ 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+   E +Y+ LE++WK EK+ +  +Q IK E+E  R+ +++A R+++++ +S
Sbjct: 439 RLAKLDEELAAKEREYSELEEVWKAEKSALLGTQHIKTELENARIAMDQARRENNFEKMS 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L+E  +++ +   N     LL+TKV  EEIAE++S+ TGIPVSK+++
Sbjct: 499 ELQYGKIPALEKQLQEAVKREEEGSEN----HLLRTKVTDEEIAEVLSKATGIPVSKMME 554

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L  RV+GQ+EA+ AV+NAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 555 GEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 614

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 615 LCKTLASFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 674

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+E  +   
Sbjct: 675 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQEAPEASY 734

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRIDD +VF  L +++I +IA IQL  L  ++ +   ++ 
Sbjct: 735 AEMKALVMSVVGQHFRPEFINRIDDTVVFHPLGQEHIRAIARIQLERLIKRMAERGYEVT 794

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
           ++  A+  I   GFD ++GAR +   K+++   L     ++P A  I  G L+   P  +
Sbjct: 795 VTDDAIDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLAQQILGGKLLPNRPVVV 846

Query: 674 D 674
           D
Sbjct: 847 D 847


>gi|386389403|ref|ZP_10074219.1| ATP-dependent chaperone protein ClpB [Haemophilus
           paraphrohaemolyticus HK411]
 gi|385695782|gb|EIG26333.1| ATP-dependent chaperone protein ClpB [Haemophilus
           paraphrohaemolyticus HK411]
          Length = 857

 Score =  798 bits (2061), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/621 (59%), Positives = 510/621 (82%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 258 KAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 318 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAAVLSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++
Sbjct: 378 YISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+   E +Y+ LE+IWK EK+ +  +Q IK E+E  R+ +++A R+++++ +S
Sbjct: 438 RLAKLDEELAAKEREYSELEEIWKAEKSALLGTQHIKTELENARIAMDQARRENNFEKMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L+E  +++ +   N     LL+TKV  EEIAE++S+ TGIPVSK+++
Sbjct: 498 ELQYGKIPALEKQLQEAVKREEEGGEN----HLLRTKVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L  RV+GQ+EA+ AV+NAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ +VFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+EM +   
Sbjct: 674 VLLDEVEKAHPEVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQEMPEATY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L +++I SIA IQL  L  ++ +   ++ 
Sbjct: 734 GELKEVVMSVVSQHFRPEFINRIDETVVFHSLGQEHIRSIARIQLERLIKRMAERGYEVT 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           I+ AA+  I   GFD ++GAR
Sbjct: 794 ITDAAINHIGKAGFDPLFGAR 814


>gi|323497828|ref|ZP_08102842.1| hypothetical protein VISI1226_18161 [Vibrio sinaloensis DSM 21326]
 gi|323317175|gb|EGA70172.1| hypothetical protein VISI1226_18161 [Vibrio sinaloensis DSM 21326]
          Length = 857

 Score =  798 bits (2061), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 503/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  + +II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELSKEEGNIILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALTNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+++ E ++A LE++W  EK  +  +Q IK E+E+ R+ +  A R  D   +S
Sbjct: 440 RLNILNEELSEKEREFAELEEVWNAEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVSDNEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRV+GQ EA+  V+NAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLQMEQFLHKRVIGQTEAVEVVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFGALD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E +K  VM  V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L  ++ +    L
Sbjct: 734 YEGMKQQVMEVVSKHFRPEFLNRVDESVVFHPLAQEHIKSIASIQLKRLSERMEEKGYSL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S+ AL  I+ +GFD ++GAR
Sbjct: 794 EVSEKALDLIAQVGFDPVFGAR 815


>gi|425066581|ref|ZP_18469701.1| ClpB protein [Pasteurella multocida subsp. gallicida P1059]
 gi|404381369|gb|EJZ77846.1| ClpB protein [Pasteurella multocida subsp. gallicida P1059]
          Length = 855

 Score =  798 bits (2061), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/621 (60%), Positives = 496/621 (79%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 259 KAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 319 RQYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I++EIDSKP+ +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 379 YVSDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDEASRK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+++ E +YA LE +WK EK  +  +Q IK E++  + ++ +A R SD+  +S
Sbjct: 439 RLAMLEKELSEKEREYAELEDVWKAEKAALSGTQHIKAELDSAKTQMEQARRASDFAKMS 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L +    +        + TLL+ +V  EEIAE++SR TGIPV+K+++
Sbjct: 499 ELQYGVIPALEKQLAQAESAE------GKEMTLLRYRVTDEEIAEVLSRATGIPVAKMME 552

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRV+GQ EAI AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 553 GEKEKLLRMEEELHKRVIGQHEAIEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 612

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 613 LCKTLANFLFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 672

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+E    D 
Sbjct: 673 ILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENSTLDY 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI  IA IQL  L  ++      L 
Sbjct: 733 PSMKELVMSVVGQHFRPEFINRIDETVVFHPLGKENIREIATIQLARLIKRMESHGYQLH 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D +YGAR
Sbjct: 793 FTDACLDFIGEVGYDPVYGAR 813


>gi|294634722|ref|ZP_06713253.1| ATP-dependent chaperone protein ClpB [Edwardsiella tarda ATCC
           23685]
 gi|451966850|ref|ZP_21920100.1| chaperone protein ClpB [Edwardsiella tarda NBRC 105688]
 gi|291091852|gb|EFE24413.1| ATP-dependent chaperone protein ClpB [Edwardsiella tarda ATCC
           23685]
 gi|451314387|dbj|GAC65462.1| chaperone protein ClpB [Edwardsiella tarda NBRC 105688]
          Length = 857

 Score =  798 bits (2061), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/625 (60%), Positives = 503/625 (80%), Gaps = 13/625 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDLAKQEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVYVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEALDRLERRIIQLKLEQQALKKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E  YA+LE+ WK EK  +  +Q IK EIE+ ++ + +A R  D   +S
Sbjct: 440 RLEILNSELEEKERDYASLEEEWKAEKAALTGTQNIKAEIEQAKIALEQARRSGDLAQMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG+L  LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 EIQYGKLPDLEKQLQSATQAE------GKSMKLLRNKVTDVEIAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L KRVVGQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEDELHKRVVGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK----EME 549
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+    E+ 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQDRFGELS 733

Query: 550 KGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
            G+   +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA IQL  L  +L +  
Sbjct: 734 YGE---MKELVMSVVTHHFRPEFINRIDETVVFHPLGQENIKAIARIQLQRLYQRLEEKG 790

Query: 610 MDLKISKAALKKISNIGFDLIYGAR 634
             + +S+AAL ++S  GFD +YGAR
Sbjct: 791 YSVTMSEAALDQLSQAGFDPVYGAR 815


>gi|359451408|ref|ZP_09240809.1| ATP-dependent Clp protease ATP-binding subunit ClpB
           [Pseudoalteromonas sp. BSi20480]
 gi|358042627|dbj|GAA77058.1| ATP-dependent Clp protease ATP-binding subunit ClpB
           [Pseudoalteromonas sp. BSi20480]
          Length = 858

 Score =  798 bits (2061), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/622 (61%), Positives = 502/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP  L +K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+R
Sbjct: 320 RKYIEKDAALERRFQKVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLK+E  A+ +E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R   +++ I  L+ +Y  L++IW  EK  ++ +Q IK E+E+ RL ++ A R SD Q +S
Sbjct: 440 RRSEMQELITDLDGQYRELDEIWNAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L   SQ ++Q        TLLK +VG +EIAEI+SR TGIPVS+++Q
Sbjct: 500 ELQYGRIPELERKLDLASQAEMQ------DMTLLKNQVGEDEIAEILSRWTGIPVSRMLQ 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L  +V+GQDEA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEDRLHSKVIGQDEAVVAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LTKALAGFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E     D
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGNND 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
             I+K  VM+ +   FRPEFINRID+ +VF  L  ++I  IA+IQL  L+ +L +M   L
Sbjct: 734 YAILKSKVMDVLISEFRPEFINRIDETVVFHPLANQHIKEIADIQLMKLRERLTEMGYLL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +IS AAL  I+  GFD +YGAR
Sbjct: 794 EISDAALDTIAASGFDPVYGAR 815


>gi|392536450|ref|ZP_10283587.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Pseudoalteromonas arctica A
           37-1-2]
          Length = 858

 Score =  798 bits (2060), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/622 (61%), Positives = 503/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+R
Sbjct: 320 RKYIEKDAALERRFQKVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLK+E  A+ +E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R   +++ I  L+ +Y  L++IW  EK  ++ +Q IK E+E+ RL ++ A R SD Q +S
Sbjct: 440 RRAEMQELITDLDGQYRELDEIWNAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L   SQ ++Q      + TLLK +VG +EIAEI+SR TGIPV++++Q
Sbjct: 500 ELQYGRIPELERKLDLASQAEMQ------EMTLLKNQVGEDEIAEILSRWTGIPVARMLQ 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L  +V+GQDEA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEDKLHSKVIGQDEAVVAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LTKALAGFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGNND 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  +   FRPEFINRID+ +VF  L  ++I  IA+IQL  L+ +L +M   L
Sbjct: 734 YTTLKAKVMEVLINEFRPEFINRIDETVVFHPLANEHIKEIADIQLMKLRERLTEMGYLL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +IS AAL++I+  GFD +YGAR
Sbjct: 794 EISDAALERIAESGFDPVYGAR 815


>gi|332307414|ref|YP_004435265.1| ATP-dependent chaperone ClpB [Glaciecola sp. 4H-3-7+YE-5]
 gi|332174743|gb|AEE23997.1| ATP-dependent chaperone ClpB [Glaciecola sp. 4H-3-7+YE-5]
          Length = 858

 Score =  798 bits (2060), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/662 (57%), Positives = 523/662 (79%), Gaps = 13/662 (1%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAI EGLAQRIIN EVP  L +K++L LD+  L+AG K+RGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIAEGLAQRIINSEVPEGLKNKRVLSLDMGALIAGAKFRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L E++  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 261 AVLNELAKEEGRVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           Q+IEKDAA ERRFQK+LVEEP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY
Sbjct: 321 QFIEKDAALERRFQKVLVEEPSVEDTVAILRGLKERYELHHSVEITDPAIVAAASLSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           ISDR +PDKAIDLIDEAA+ I++++DSKPE MD+LERR+IQLK+E +A+ +E DE+S KR
Sbjct: 381 ISDRQLPDKAIDLIDEAASSIRMQMDSKPEDMDRLERRIIQLKLEEQALAKEKDEASHKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L LI+ E  + E K++ LE IWK EK  ++ +Q I+ E+++ +L +  A R SD   +S+
Sbjct: 441 LELIEIEREQAEFKFSELEAIWKSEKQAMQGTQNIRAELDQAKLDLEIARRASDLSRMSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG + +LE  L+  ++ + Q      +  LLK++V   EIA+++SR TGIPVSK+++ 
Sbjct: 501 LQYGRIPELESKLEIATESESQ----PIEHQLLKSRVTESEIADVLSRWTGIPVSKMLEG 556

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           E++KL+N+E+ L +RVVGQ EA++AVSNAIRRSR+GL+D  +P GSF+FLGPTGVGKTEL
Sbjct: 557 EKDKLMNMESALHERVVGQSEAVNAVSNAIRRSRAGLADPNKPIGSFLFLGPTGVGKTEL 616

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CKTL+  +F+ E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+I
Sbjct: 617 CKTLANFLFDTEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVI 676

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDK 553
           LLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E   + D 
Sbjct: 677 LLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQHSENDY 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K +V++ +  +FRPEF+NR+D+ +VF  L    I SIA+ QL +L+ +L    + L+
Sbjct: 737 EKMKQSVLDVLSTHFRPEFLNRVDETVVFHPLGLAQITSIASKQLQLLRKRLEDKGIGLE 796

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
           ++ AAL+K++  GFD +YGAR +   K+++ + +     ++P A  I  G L+     S+
Sbjct: 797 LTDAALEKLAEAGFDPVYGARPL---KRAIQMEI-----ENPLAQKILSGKLMTDSVVSI 848

Query: 674 DT 675
           D 
Sbjct: 849 DA 850


>gi|419953969|ref|ZP_14470111.1| ClpB protein [Pseudomonas stutzeri TS44]
 gi|387969344|gb|EIK53627.1| ClpB protein [Pseudomonas stutzeri TS44]
          Length = 854

 Score =  798 bits (2060), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/621 (61%), Positives = 510/621 (82%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPDGLKDKRLLALDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEA ++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE+++K
Sbjct: 380 YITDRQLPDKAIDLIDEAGSRIRMEIDSKPEALDRLDRRLIQLKIEREALKKEDDEATRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I KLE +YA+LE+IWK EK  ++ S Q++++IE+ + ++  A RK D   ++
Sbjct: 440 RLAKLEDDIAKLEKEYADLEEIWKSEKAEVQGSAQLQQKIEQAKAELEAARRKGDLARMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLQMVDQ------HGKTENQLLRNKVTDEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E++L +RV+GQ EA+ AV+NA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEDMLHQRVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L+DE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GD 
Sbjct: 674 VLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSMQIQEL-VGDP 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           +  + AVM+ V  +FRPEFINRID+++VF  L R+ I  IA IQL  L+ +L +  + L+
Sbjct: 733 DAQRAAVMDAVGHHFRPEFINRIDEVVVFDPLAREQIAGIAEIQLARLRKRLAERELSLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +++ A+ K+  +G+D +YGAR
Sbjct: 793 LTQEAMDKLIAVGYDPVYGAR 813


>gi|410641943|ref|ZP_11352461.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
           chathamensis S18K6]
 gi|410138260|dbj|GAC10648.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
           chathamensis S18K6]
          Length = 858

 Score =  798 bits (2060), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/662 (57%), Positives = 523/662 (79%), Gaps = 13/662 (1%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAI EGLAQRIIN EVP  L +K++L LD+  L+AG K+RGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIAEGLAQRIINSEVPEGLKNKRVLSLDMGALIAGAKFRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L E++  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 261 AVLNELAKEEGRVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           Q+IEKDAA ERRFQK+LVEEP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY
Sbjct: 321 QFIEKDAALERRFQKVLVEEPSVEDTVAILRGLKERYELHHSVEITDPAIVAAASLSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           ISDR +PDKAIDLIDEAA+ I++++DSKPE MD+LERR+IQLK+E +A+ +E DE+S KR
Sbjct: 381 ISDRQLPDKAIDLIDEAASSIRMQMDSKPEDMDRLERRIIQLKLEEQALAKEKDEASHKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L LI+ E  + E K++ LE IWK EK  ++ +Q I+ E+++ +L +  A R SD   +S+
Sbjct: 441 LELIEIEREQAEFKFSELEAIWKSEKQAMQGTQNIRAELDQAKLDLEIARRASDLSRMSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG + +LE  L+  ++ + Q      +  LLK++V   EIA+++SR TGIPVSK+++ 
Sbjct: 501 LQYGRIPELESKLEIATESESQ----PIEHQLLKSRVTESEIADVLSRWTGIPVSKMLEG 556

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           E++KL+N+E+ L +RVVGQ EA++AVSNAIRRSR+GL+D  +P GSF+FLGPTGVGKTEL
Sbjct: 557 EKDKLMNMESALHERVVGQSEAVNAVSNAIRRSRAGLADPNKPIGSFLFLGPTGVGKTEL 616

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CKTL+  +F+ E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+I
Sbjct: 617 CKTLANFLFDTEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVI 676

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDK 553
           LLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E   + D 
Sbjct: 677 LLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQHSENDY 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K +V++ +  +FRPEF+NR+D+ +VF  L    I SIA+ QL +L+ +L    + L+
Sbjct: 737 EKMKQSVLDVLSTHFRPEFLNRVDETVVFHPLGLAQITSIASKQLQLLRRRLEDKGIGLE 796

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
           ++ AAL+K++  GFD +YGAR +   K+++ + +     ++P A  I  G L+     S+
Sbjct: 797 LTDAALEKLAEAGFDPVYGARPL---KRAIQMEI-----ENPLAQKILSGKLMTDSVVSI 848

Query: 674 DT 675
           D 
Sbjct: 849 DA 850


>gi|414072182|ref|ZP_11408133.1| ATP-dependent Clp protease ATP-binding subunit ClpB
           [Pseudoalteromonas sp. Bsw20308]
 gi|410805399|gb|EKS11414.1| ATP-dependent Clp protease ATP-binding subunit ClpB
           [Pseudoalteromonas sp. Bsw20308]
          Length = 858

 Score =  798 bits (2060), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/622 (61%), Positives = 503/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+R
Sbjct: 320 RKYIEKDAALERRFQKVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLK+E  A+ +E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R   +++ I  L+ +Y  L++IW  EK  ++ +Q IK E+E+ RL ++ A R SD Q +S
Sbjct: 440 RRAEMQELITDLDGQYRELDEIWNAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L   SQ ++Q      + TLLK +VG +EIAEI+SR TGIPVS+++Q
Sbjct: 500 ELQYGRIPELERKLDLASQAEMQ------EMTLLKNQVGEDEIAEILSRWTGIPVSRMLQ 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L  +V+GQDEA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEDKLHSKVIGQDEAVVAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LTKALAGFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E     D
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGNND 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM+ +   FRPEFINRID+ +VF  L  ++I  IA+IQL  L+ +L +M   L
Sbjct: 734 YTTLKAKVMDVLINEFRPEFINRIDETVVFHPLANEHIKEIADIQLMKLRERLTEMGYLL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +I+  AL++I+  GFD +YGAR
Sbjct: 794 EITDTALERIAASGFDPVYGAR 815


>gi|260771761|ref|ZP_05880679.1| ClpB protein [Vibrio metschnikovii CIP 69.14]
 gi|260613053|gb|EEX38254.1| ClpB protein [Vibrio metschnikovii CIP 69.14]
          Length = 838

 Score =  797 bits (2059), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/663 (57%), Positives = 516/663 (77%), Gaps = 15/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 181 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 240

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 241 KSVLNELAKEEGNVILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 300

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 301 RQYIEKDPALERRFQKVLVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSHR 360

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+I++DSKPE++DKLER++IQLKIE +A+  E+D++S+K
Sbjct: 361 YISDRQLPDKAIDLIDEAASSIRIQMDSKPEVLDKLERKIIQLKIEQQALSNEHDDASEK 420

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I  E+ + E +Y+ LE+IW  EK  +  +Q IK  +E+ RL +  A R  D   +S
Sbjct: 421 RLGIINDELKEKEREYSELEEIWNTEKAALSGTQHIKSALEQARLDLEVARRAGDLNRMS 480

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV  EEIAE++S+ TGIPV+K+++
Sbjct: 481 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDEEIAEVLSKQTGIPVAKMLE 534

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L +RV+GQ EA+  V++AIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 535 AEKEKLLQMETFLHQRVIGQSEAVEVVADAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 594

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 595 LCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 654

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 655 LLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFAHLD 714

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  VM  V  +FRPEF+NRID+ +VF  L ++ I SIA IQL  L+ +L   +  L
Sbjct: 715 YQTMKEQVMEVVSKHFRPEFLNRIDESVVFHPLAQEQIKSIAFIQLERLRQRLADKDYGL 774

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
            +S  AL  +++IGFD +YGAR +   K+++   +     ++P A  I  G  I   P  
Sbjct: 775 IVSDDALDLVAHIGFDPVYGARPL---KRAIQQTI-----ENPLAKSILSGQFIPGTPIY 826

Query: 673 LDT 675
           LD 
Sbjct: 827 LDV 829


>gi|333901990|ref|YP_004475863.1| ATP-dependent chaperone ClpB [Pseudomonas fulva 12-X]
 gi|333117255|gb|AEF23769.1| ATP-dependent chaperone ClpB [Pseudomonas fulva 12-X]
          Length = 854

 Score =  797 bits (2059), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/621 (60%), Positives = 509/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRI+NGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIVNGEVPDGLKDKRLLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KAVLNELSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPSLARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHH V ITD AI+AA++LS+R
Sbjct: 320 RQFIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHKVAITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE++D+L+RRLIQLK+E +A+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEVLDRLDRRLIQLKVEAQALKKEEDEAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R + ++ +I KLE +YA+LE IWK EK  ++ S QI++ IE+ + ++  A RK D   ++
Sbjct: 440 RFVKLQDDIAKLEKEYADLEDIWKSEKAEVQGSAQIQQRIEQAKTELEAARRKGDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL++KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPDLERSLQMVDQ------HGTTENQLLRSKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E LL +RV+GQDEA+ AV+NA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLKMEGLLHQRVIGQDEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ E++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEDALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L+DE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GD+
Sbjct: 674 VLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQEL-VGDR 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E  + AVM+ V  +FRPEF+NRID+++VF  L R+ I  IA IQL+ L  +L +  + L+
Sbjct: 733 EAQRAAVMDAVGNHFRPEFVNRIDEVVVFEPLAREQIAGIARIQLSRLLQRLAERELSLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+ K+  +G+D +YGAR
Sbjct: 793 LSDEAMDKLIAVGYDPVYGAR 813


>gi|315126101|ref|YP_004068104.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Pseudoalteromonas sp. SM9913]
 gi|315014615|gb|ADT67953.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Pseudoalteromonas sp. SM9913]
          Length = 858

 Score =  797 bits (2059), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/622 (60%), Positives = 502/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+R
Sbjct: 320 RKYIEKDAALERRFQKVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLKIE  A+ +E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRLQIDSKPEALDKLERRIIQLKIEDNALAKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R   + + I +LE +Y  L+++W  EK  ++ +Q IK E+E+ RL +  A R SD Q +S
Sbjct: 440 RRTEMVELITELEGQYRELDEVWNAEKASLQGTQVIKAELEQARLDLEVARRASDLQRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L   SQ ++Q      + +LLK +VG +EIAEI+SR TGIPV++++Q
Sbjct: 500 ELQYGRIPELERKLDLASQAEMQ------EMSLLKNQVGEDEIAEILSRWTGIPVARMLQ 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  +V+GQDEA+ AV+NAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEEQLHNKVIGQDEAVVAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ E +++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LTKALAGYMFDTESAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E     D
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGSND 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  VM  +   FRPEFINRID+ +VF  L+  +I  IA+IQL+ L+ +L +M   L
Sbjct: 734 YDELKAKVMGVLHNEFRPEFINRIDETVVFHSLSHSHIKEIADIQLSKLRQRLTEMGYLL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +++ AAL++I+  GFD +YGAR
Sbjct: 794 ELTDAALERIAASGFDPVYGAR 815


>gi|410647346|ref|ZP_11357781.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
           agarilytica NO2]
 gi|410133201|dbj|GAC06180.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
           agarilytica NO2]
          Length = 858

 Score =  797 bits (2059), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/662 (57%), Positives = 523/662 (79%), Gaps = 13/662 (1%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAI EGLAQRIIN EVP  L +K++L LD+  L+AG K+RGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIAEGLAQRIINSEVPEGLKNKRVLSLDMGALIAGAKFRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L E++  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 261 AVLNELAKEEGRVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           Q+IEKDAA ERRFQK+LVEEP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY
Sbjct: 321 QFIEKDAALERRFQKVLVEEPSVEDTVAILRGLKERYELHHSVEITDPAIVAAASLSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           ISDR +PDKAIDLIDEAA+ I++++DSKPE MD+LERR+IQLK+E +A+ +E DE+S KR
Sbjct: 381 ISDRQLPDKAIDLIDEAASSIRMQMDSKPEDMDRLERRIIQLKLEEQALAKEKDEASHKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L LI+ E  + E K++ LE IWK EK  ++ +Q I+ E+++ +L +  A R SD   +S+
Sbjct: 441 LELIEIEREQAEFKFSELEAIWKSEKQAMQGTQNIRAELDQAKLDLEIARRASDLSRMSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG + +LE  L+  ++ + Q      +  LLK++V   EIA+++SR TGIPVSK+++ 
Sbjct: 501 LQYGRIPELESKLEIATESESQ----PLEHQLLKSRVTESEIADVLSRWTGIPVSKMLEG 556

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           E++KL+N+E+ L +RVVGQ EA++AVSNAIRRSR+GL+D  +P GSF+FLGPTGVGKTEL
Sbjct: 557 EKDKLMNMESALHERVVGQSEAVNAVSNAIRRSRAGLADPNKPIGSFLFLGPTGVGKTEL 616

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CKTL+  +F+ E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+I
Sbjct: 617 CKTLANFLFDTEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVI 676

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDK 553
           LLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E   + D 
Sbjct: 677 LLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQHSENDY 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K +V++ +  +FRPEF+NR+D+ +VF  L    I SIA+ QL +L+ +L    + L+
Sbjct: 737 EKMKQSVLDVLSTHFRPEFLNRVDETVVFHPLGLAQITSIASKQLQLLRKRLEDKGIGLE 796

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
           ++ AAL+K++  GFD +YGAR +   K+++ + +     ++P A  I  G L+     S+
Sbjct: 797 LTDAALEKLAEAGFDPVYGARPL---KRAIQMEI-----ENPLAQKILSGKLMTDSVVSI 848

Query: 674 DT 675
           D 
Sbjct: 849 DA 850


>gi|336312569|ref|ZP_08567517.1| ClpB protein [Shewanella sp. HN-41]
 gi|335863813|gb|EGM68935.1| ClpB protein [Shewanella sp. HN-41]
          Length = 857

 Score =  797 bits (2059), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/661 (57%), Positives = 520/661 (78%), Gaps = 21/661 (3%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  + +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGSLIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 260 KAVLNELAQEEGQVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATMSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I++++DSKPE++D+LERR IQLK+E +A+ +E DE+S++
Sbjct: 380 YVSDRKLPDKAIDLIDEAASSIRMQMDSKPELLDRLERRAIQLKLEEQALAKENDEASRR 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ E++++E K + L +IW+ EK  +  +Q IK ++E+ R+ +  A R  D   +S
Sbjct: 440 RLDHLRVELHEVEAKASELNEIWRTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   SQ ++Q        TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLASQAEMQ------DMTLLRNKVTELEIAEVLSKATGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQ+EA+ AV+NAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEVALHERVIGQNEAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+ E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKSLARFLFDTESALVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE----ME 549
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E    + 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDIIQEGFGHVS 733

Query: 550 KGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
            G+   +K +VMN V   FRPEF+NRID+ +VF  L+  NI  IA+IQ+  L+ +L + +
Sbjct: 734 YGE---MKASVMNVVTHSFRPEFLNRIDESVVFHPLDAANIKRIASIQIASLRQRLAEKD 790

Query: 610 MDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKG 669
             L+I+  AL  I+ IGFD +YGAR +   K++L     +   ++P A  +  GDL+   
Sbjct: 791 YTLEITDDALSLIAEIGFDPVYGARPL---KRAL-----QQEVENPLAQKLLRGDLLPGK 842

Query: 670 P 670
           P
Sbjct: 843 P 843


>gi|89075037|ref|ZP_01161478.1| putative clpB, ATPase with chaperone activity [Photobacterium sp.
           SKA34]
 gi|89049124|gb|EAR54689.1| putative clpB, ATPase with chaperone activity [Photobacterium sp.
           SKA34]
          Length = 858

 Score =  797 bits (2059), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/622 (60%), Positives = 503/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIVNGEVPEGLRDKRVLSLDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S     +I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSQEDGRVILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLKIE +A+++E D +S K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKIEQQALEKEDDAASNK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E++  E +YA LE++W  EK  +  +Q IK E+E+ R  +  A R  D   +S
Sbjct: 440 RLSDLLEELDLKEREYAELEEVWNAEKAALSGTQHIKAELEQARTDVEIARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLLK KV   EIA+++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLKNKVTDTEIADVLSKATGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L  RV+GQDEA+ AV+NAIRRSR+GL+D +RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEDELHHRVIGQDEAVVAVANAIRRSRAGLADPQRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F++EE+++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKSLANFMFDSEEAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD+I+E     D
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDRIQEHFGNLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E IK  VM+ V  +FRPEFINR+D+ +VF  L ++NI +IA+IQL  LK +L + +  L
Sbjct: 734 YEGIKALVMDVVGQHFRPEFINRVDETVVFHPLGKENIKNIASIQLERLKKRLAENDFRL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +  +AL  I+  GFD +YGAR
Sbjct: 794 DVEDSALDMIAEAGFDPVYGAR 815


>gi|238921070|ref|YP_002934585.1| ATP-dependent chaperone protein ClpB, putative [Edwardsiella
           ictaluri 93-146]
 gi|238870639|gb|ACR70350.1| ATP-dependent chaperone protein ClpB, putative [Edwardsiella
           ictaluri 93-146]
          Length = 857

 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/623 (60%), Positives = 501/623 (80%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDLAKQEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVYVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEALDRLERRIIQLKLEQQALKKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E  YA+LE+ WK EK  +  +Q IK EIE+ ++ + +A R  D   +S
Sbjct: 440 RLEILNIELEEKERDYASLEEEWKAEKAALTGTQNIKAEIEQAKIALEQARRSGDLAQMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG+L  LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 EIQYGKLPDLEKQLQAATQAE------GKSMKLLRNKVTDAEIAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L KRVVGQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEGELHKRVVGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++   GD+
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQD-RFGDQ 732

Query: 554 EI--IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
               +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA IQL  L  +L +    
Sbjct: 733 SYGEMKALVMSVVTHHFRPEFINRIDETVVFHPLGQENIKAIARIQLQRLYQRLEEKGYS 792

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           + +S+AAL ++S  GFD +YGAR
Sbjct: 793 VTMSEAALDQLSQAGFDPVYGAR 815


>gi|410620447|ref|ZP_11331318.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
           polaris LMG 21857]
 gi|410159932|dbj|GAC35456.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
           polaris LMG 21857]
          Length = 858

 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/662 (57%), Positives = 524/662 (79%), Gaps = 13/662 (1%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIG PGVGKTAI EGLAQRIIN EVP  L +K++L LD+  L+AG KYRGEFE+RLK
Sbjct: 201 NPVLIGAPGVGKTAIAEGLAQRIINSEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L E++  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 261 AVLNELAKEEGRVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           Q+IEKDAA ERRFQK+LVEEP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY
Sbjct: 321 QFIEKDAALERRFQKVLVEEPSVEDTVAILRGLKERYELHHSVEITDPAIVAAASLSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           ISDR +PDKAIDLIDEAA+ I++++DSKPE MD+LERR+IQLK+E +A+ +E D++S KR
Sbjct: 381 ISDRQLPDKAIDLIDEAASSIRMQMDSKPEDMDRLERRIIQLKLEEQALAKEKDDASHKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L LI+ E  + E K++ LE IWK EK  ++ +Q I+ E+E+ +L +  A R SD   +S+
Sbjct: 441 LELIEIEREQAEFKFSELETIWKAEKQAMQGTQNIRAELEQAKLDLEIARRASDLSRMSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG + +LE  L+  ++ + Q    + +  LLK++V   EIA+++SR TGIPVSK+++ 
Sbjct: 501 LQYGRIPELESKLEIATESESQ----SVEHQLLKSRVTENEIADVLSRWTGIPVSKMLEG 556

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           E++KL+++E+ L +RVVGQ EA++AVSNAIRRSR+GL+D  +P GSF+FLGPTGVGKTEL
Sbjct: 557 EKDKLMSMESALHERVVGQSEAVNAVSNAIRRSRAGLADPNKPIGSFLFLGPTGVGKTEL 616

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CKTL+  +F+ E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+I
Sbjct: 617 CKTLAHFLFDTEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVI 676

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGDK 553
           LLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E   + D 
Sbjct: 677 LLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQHSENDY 736

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K +V++ +  +FRPEF+NR+D+ +VF  L  + I SIA+ QL  L+ +L +  + L+
Sbjct: 737 EKMKQSVLDVLSTHFRPEFLNRVDETVVFHPLGLEQITSIASKQLQFLRKRLEEKGIGLE 796

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
           ++ AAL+K++  GFD +YGAR +   K+++ + +     ++P A  I  G LI     S+
Sbjct: 797 LTDAALQKLAEAGFDPVYGARPL---KRAIQMEI-----ENPLAQKILSGKLIADSVVSI 848

Query: 674 DT 675
           D 
Sbjct: 849 DA 850


>gi|422016627|ref|ZP_16363208.1| protein disaggregation chaperone [Providencia burhodogranariea DSM
           19968]
 gi|414092612|gb|EKT54287.1| protein disaggregation chaperone [Providencia burhodogranariea DSM
           19968]
          Length = 857

 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/664 (58%), Positives = 519/664 (78%), Gaps = 17/664 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKK
Sbjct: 380 YISDRMLPDKAIDLIDEAGASLRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ E+ + E +Y++LE+ WK EK  +  +Q IK E+E  R +I KA R  D   +S
Sbjct: 440 RLEMLEGELAEKEREYSSLEEEWKAEKASLTGTQHIKAELENARYEIEKARRSGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L+  ++ +           LL+ KV   EIAEI++R TGIPVS++++
Sbjct: 500 ELQYGRIPELEKQLEAATKAE------GKSMKLLRNKVTDVEIAEILARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQQLHRRVIGQDEAVVAVSNAIRRSRAGLSDPNRPIGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--G 551
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E     G
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQERFGVIG 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E +K  VM  V   FRPEFINRID+++VF  L +++I++IANIQL  L  +L +   +
Sbjct: 734 YSE-MKDMVMEVVAHSFRPEFINRIDEVVVFHPLGKEHIMNIANIQLARLYKRLEEHGYE 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           +  + AAL+KI   GFD I+GAR +   K+++   +     ++P A  I  G LI   P 
Sbjct: 793 VSATPAALEKIGEAGFDPIFGARPL---KRAIQQEI-----ENPLAQEILSGKLIPGKPV 844

Query: 672 SLDT 675
           +LD 
Sbjct: 845 TLDV 848


>gi|333907083|ref|YP_004480669.1| ATP-dependent chaperone ClpB [Marinomonas posidonica IVIA-Po-181]
 gi|333477089|gb|AEF53750.1| ATP-dependent chaperone ClpB [Marinomonas posidonica IVIA-Po-181]
          Length = 859

 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/622 (60%), Positives = 506/622 (81%), Gaps = 6/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKKKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+GTGK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KALLNELSKQEGQVILFIDEIHTMVGTGKSEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP + ++I+ILRGL+++YEVHHGV+ITD AI+A+++LS R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVLDSIAILRGLKERYEVHHGVDITDSAIIASAKLSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++E+DSKPE MD+LERRLIQLKIE EA+K+E D++SK 
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEMDSKPEDMDRLERRLIQLKIEKEALKKEKDKASKL 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +  EI++L+ ++++L++IW  EK  +  +Q++KEE+E VR ++ +A R  +   +S
Sbjct: 440 RLDELGSEIDRLQKEFSDLDEIWNAEKAAVHGAQKLKEELESVRHEMEEARRNGNLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE  +++  Q++        +  LLK  V  EEIA +VSR TGIPV K+++
Sbjct: 500 ELQYGVIPMLEAEIEKAGQEE-----ENTETRLLKRHVSEEEIATVVSRWTGIPVDKMLE 554

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L + V+GQ+EA+SAVSNA+RRSRSGL+D  +P GSF+FLGPTGVGKTE
Sbjct: 555 GERDKLLRMEEALHESVMGQNEAVSAVSNAVRRSRSGLADPNKPNGSFLFLGPTGVGKTE 614

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+ E++++R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 615 LCKSLAKFLFDTEQAMVRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSV 674

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+E +  D+
Sbjct: 675 LLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIQEYQSDDQ 734

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM+ V  +FRPEFINRID+ +VF  L R  I  IA IQL  L N+L +M M L
Sbjct: 735 YDEIKAKVMSVVGTHFRPEFINRIDETVVFHPLMRSQIKGIAAIQLAHLNNRLEEMGMSL 794

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +S AA ++++ +G+D +YGAR
Sbjct: 795 IMSDAAQERLAEVGYDPVYGAR 816


>gi|254375107|ref|ZP_04990587.1| hypothetical protein FTDG_01296 [Francisella novicida GA99-3548]
 gi|151572825|gb|EDN38479.1| hypothetical protein FTDG_01296 [Francisella novicida GA99-3548]
          Length = 859

 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/621 (59%), Positives = 509/621 (81%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP  +  KK+L LD+  LLAG K+RG+FE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNNEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 260 KSVLKELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+R
Sbjct: 320 REYVEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++++EI  L+ +Y  LE++WK EK  ++ + ++KEE+EK + ++ K  R  D   ++
Sbjct: 440 RLEILEQEIKGLDSEYKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE  +K+  + + +   N     L++T V   EIA++VS+ TGIPVSK+++
Sbjct: 500 ELQYGKIPELEAQIKQIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD  RP GSFMFLGPTGVGKTE
Sbjct: 556 GEKDKLLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+
Sbjct: 616 LTKALAEFLFDDEDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+  D 
Sbjct: 676 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AVM  V  +FRPEF+NR+DD IVF  LN++ I  IA IQ+  L+ +L  +++ L+
Sbjct: 736 ETVKSAVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLE 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++  A+ K+++ GFD ++GAR
Sbjct: 796 VTTEAMDKLADAGFDPVFGAR 816


>gi|418464566|ref|ZP_13035505.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
           RhAA1]
 gi|359756521|gb|EHK90678.1| ATP-dependent chaperone ClpB [Aggregatibacter actinomycetemcomitans
           RhAA1]
          Length = 856

 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/621 (59%), Positives = 501/621 (80%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNSEVPEGLKNKRVLSLDMGTLIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
            QYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 HQYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKP+ +D+L+RR+IQLK+E +A+++E D++S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE++WK EK  +  +Q IK E+E  R ++ +A R  D   +S
Sbjct: 440 RLEMLEKELAEKEREYAELEEVWKAEKAALSGTQHIKAELENARTQMEQARRAGDLSKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L +    +        + +LL+ +V  EEIAE++SR TGIPV+K+++
Sbjct: 500 ELQYGKIPELEKQLAQAEGAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVAKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEFLHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALASFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E  +   
Sbjct: 674 ILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHAQEGD 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K  VM  V  YFRPEFINRID+ ++F  LN++NI  IA+IQL  L  ++      L 
Sbjct: 734 DAVKSMVMEVVGRYFRPEFINRIDETVMFHPLNKENIRQIADIQLRRLTRRMEIHGYVLN 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  IS+IG+D I+GAR
Sbjct: 794 FTDATLDFISDIGYDPIFGAR 814


>gi|332535268|ref|ZP_08411070.1| protein ClpB [Pseudoalteromonas haloplanktis ANT/505]
 gi|332035299|gb|EGI71803.1| protein ClpB [Pseudoalteromonas haloplanktis ANT/505]
          Length = 858

 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/622 (61%), Positives = 503/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+R
Sbjct: 320 RKYIEKDAALERRFQKVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLK+E  A+ +E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R   +++ I  L+ +Y  L++IW  EK  ++ +Q IK E+E+ RL ++ A R SD Q +S
Sbjct: 440 RRTEMQELITDLDGQYRELDEIWNAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L   SQ ++Q      + TLLK +VG +EIAEI+SR TGIPV++++Q
Sbjct: 500 ELQYGRIPELERKLDLASQAEMQ------EMTLLKNQVGEDEIAEILSRWTGIPVARMLQ 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L  +V+GQDEA+ AV+NAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEDKLHSKVIGQDEAVVAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LTKALAGFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E     D
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGNND 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  +   FRPEFINRID+ +VF  L  ++I  IA+IQL  L+ +L +M   L
Sbjct: 734 YTTLKAKVMEVLINEFRPEFINRIDETVVFHPLANEHIKEIADIQLMKLRERLTEMGYLL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +IS AAL++I+  GFD +YGAR
Sbjct: 794 EISDAALERIAASGFDPVYGAR 815


>gi|387825396|ref|YP_005824867.1| ClpB protein [Francisella cf. novicida 3523]
 gi|332184862|gb|AEE27116.1| ClpB protein [Francisella cf. novicida 3523]
          Length = 859

 Score =  797 bits (2058), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/621 (59%), Positives = 507/621 (81%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP  +  KK+L LD+  LLAG K+RG+FE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNNEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 260 KSVLKELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+R
Sbjct: 320 REYVEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDEATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ EI  LE +Y   E++WK EK  ++ + ++KE++EK + ++ K  R  D   ++
Sbjct: 440 RLEILETEIKGLESEYQGFEELWKAEKLKMQGASKLKEQLEKTKFELEKYQRAGDLSKMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE  +K+    + +   N     L++T V   EIA++VS+ TGIPVSK+++
Sbjct: 500 ELQYGKIPELEAQIKQIENTEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD  RP GSFMFLGPTGVGKTE
Sbjct: 556 GEKDKLLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE +RRKPYS+
Sbjct: 616 LTKALAEFLFDDEDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHIRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+  D 
Sbjct: 676 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           +I+K AVM  V  +FRPEF+NR+DD IVF  LN++ I  IA IQ+  L+ +L  +N+ L+
Sbjct: 736 DIVKDAVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLRDLNIGLE 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++  A+ K+++ GFD ++GAR
Sbjct: 796 VTAKAMDKLADAGFDPVFGAR 816


>gi|149190363|ref|ZP_01868636.1| ClpB protein [Vibrio shilonii AK1]
 gi|148835852|gb|EDL52816.1| ClpB protein [Vibrio shilonii AK1]
          Length = 857

 Score =  796 bits (2057), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/622 (60%), Positives = 502/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGSLVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNIILFIDELHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+K E D +S+K
Sbjct: 380 YITDRQLPDKAIDLIDEAASSIRLQIDSKPESLDKLERKIIQLKIEQQALKNESDNASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RLL + +E+   E  YA LE++W  EK  +  +Q IK E+E+ RL ++ A R  D   +S
Sbjct: 440 RLLALNEELESKERDYAELEEVWNAEKAALSGTQHIKSELEQARLDMDVARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + +LL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMSLLRNKVTDAEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +E++L KRV+GQ EA+  VS+AIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 AEKDKLLKMEDVLHKRVIGQAEAVEVVSDAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E  +  D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFQVLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E IK  VM+ V  +F+PEF+NR+D+ +VF  L  ++I SIA IQL  L  ++      L
Sbjct: 734 YEGIKREVMDVVTSHFKPEFLNRVDESVVFHPLGAEHIKSIAGIQLQRLGKRMEDNGYHL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            ++ AAL  I+ +G+D +YGAR
Sbjct: 794 VVADAALDYIAKVGYDPVYGAR 815


>gi|198283746|ref|YP_002220067.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218665588|ref|YP_002426377.1| clpB protein [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198248267|gb|ACH83860.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218517801|gb|ACK78387.1| clpB protein [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 866

 Score =  796 bits (2057), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 511/622 (82%), Gaps = 2/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLA R+INGEVP SL  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLALRLINGEVPESLRDKRLLGLDLGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++  ++  II+FIDE+HT++G GK EGS+DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KSLLNDLEKSEGKIILFIDEIHTLVGAGKAEGSMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQ++LV+EP +E+ I+ILRGL+++YE HHGV ITDPA+VAA +LS+R
Sbjct: 320 RKYIEKDAALERRFQRVLVDEPSVEDAIAILRGLKERYEAHHGVRITDPALVAAVQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++IK+EIDSKP+ +D+LERR+IQL IE  A+++E DE+S+K
Sbjct: 380 YITDRNLPDKAIDLMDEAASRIKMEIDSKPQELDELERRIIQLNIERVALEKEKDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ +I + + KY  LE++WK EK  I+ + QI++E+++ R++++ A R +D + ++
Sbjct: 440 RLDILQAQIKESDRKYQELEEVWKGEKLAIEGTSQIQKELDRKRVELDTARRANDLERMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+Y  +  LE  L   ++   Q   +  K TLL+T+VG EEIAE+V+R TGIPVSK+++
Sbjct: 500 ELQYSSIPALEAQL-HAAEIHAQSAGSGAKPTLLRTEVGEEEIAEVVARWTGIPVSKMLE 558

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L  RVVGQ EA++AVSNAIRRSR+GLSD KRP GSF+FLGPTGVGKTE
Sbjct: 559 GEKEKLLKMEERLQARVVGQSEAVAAVSNAIRRSRAGLSDPKRPNGSFLFLGPTGVGKTE 618

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E+ ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 619 LTKALAEFLFDSEDHLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 678

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           +LLDE+EKA+ +VFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD+I+E   KG+
Sbjct: 679 VLLDEVEKAHPEVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDRIQEFSRKGE 738

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +++AV++ V+ +FRPEF+NRID++++FR L    +  I  IQ+  L+++L + +MDL
Sbjct: 739 YDSMRVAVLDVVQDHFRPEFLNRIDELVIFRPLTAVQLREITGIQMGFLRSRLRERDMDL 798

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +S  AL  ++ +G+D +YGAR
Sbjct: 799 VLSDGALDHLAEVGYDPVYGAR 820


>gi|386312799|ref|YP_006008964.1| ATP-dependent chaperone ClpB [Shewanella putrefaciens 200]
 gi|319425424|gb|ADV53498.1| ATP-dependent chaperone ClpB [Shewanella putrefaciens 200]
          Length = 857

 Score =  796 bits (2057), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/661 (57%), Positives = 518/661 (78%), Gaps = 21/661 (3%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  + +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGSLIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 260 KAVLNELSQEEGQVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATMSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR IQLK+E +A+ +E DE+S++
Sbjct: 380 YVSDRKLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRAIQLKLEEQALAKENDEASRR 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++E+  +E K + L +IW+ EK  +  +Q IK ++E+ R+ +  A R  D   +S
Sbjct: 440 RLDHLQEELRDVEAKASELNEIWRTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   SQ ++Q        TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLASQAEMQ------DMTLLRNKVTEFEIAEVLSKATGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQ+EA+ AV+NAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEVALHERVIGQNEAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+ E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKSLARFLFDTESALVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++I+MTSNLGSD I+E   G  
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVIIMTSNLGSDIIQE---GFG 730

Query: 554 EI----IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
           ++    +K AVMN V   FRPEF+NRID+ +VF  L+  NI  IA+IQ+  L+ +L + +
Sbjct: 731 QVTYAEMKAAVMNVVTHSFRPEFLNRIDESVVFHPLDAANIKRIASIQIASLRQRLAEKD 790

Query: 610 MDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKG 669
             L+I+  AL  I+ IGFD +YGAR +   K++L     +   ++P A  +  GDL+   
Sbjct: 791 YTLEITDDALSLIAEIGFDPVYGARPL---KRAL-----QQEVENPLAQKLLRGDLLPGK 842

Query: 670 P 670
           P
Sbjct: 843 P 843


>gi|126173263|ref|YP_001049412.1| ATPase [Shewanella baltica OS155]
 gi|152999622|ref|YP_001365303.1| ATPase [Shewanella baltica OS185]
 gi|160874241|ref|YP_001553557.1| ATPase AAA-2 domain-containing protein [Shewanella baltica OS195]
 gi|217974426|ref|YP_002359177.1| ATP-dependent chaperone ClpB [Shewanella baltica OS223]
 gi|373948486|ref|ZP_09608447.1| ATP-dependent chaperone ClpB [Shewanella baltica OS183]
 gi|378707486|ref|YP_005272380.1| ATP-dependent chaperone ClpB [Shewanella baltica OS678]
 gi|386325670|ref|YP_006021787.1| ATP-dependent chaperone ClpB [Shewanella baltica BA175]
 gi|386340025|ref|YP_006036391.1| ATP-dependent chaperone ClpB [Shewanella baltica OS117]
 gi|418024125|ref|ZP_12663108.1| ATP-dependent chaperone ClpB [Shewanella baltica OS625]
 gi|125996468|gb|ABN60543.1| ATPase AAA-2 domain protein [Shewanella baltica OS155]
 gi|151364240|gb|ABS07240.1| ATPase AAA-2 domain protein [Shewanella baltica OS185]
 gi|160859763|gb|ABX48297.1| ATP-dependent chaperone ClpB [Shewanella baltica OS195]
 gi|217499561|gb|ACK47754.1| ATP-dependent chaperone ClpB [Shewanella baltica OS223]
 gi|315266475|gb|ADT93328.1| ATP-dependent chaperone ClpB [Shewanella baltica OS678]
 gi|333819815|gb|AEG12481.1| ATP-dependent chaperone ClpB [Shewanella baltica BA175]
 gi|334862426|gb|AEH12897.1| ATP-dependent chaperone ClpB [Shewanella baltica OS117]
 gi|353536085|gb|EHC05644.1| ATP-dependent chaperone ClpB [Shewanella baltica OS625]
 gi|373885086|gb|EHQ13978.1| ATP-dependent chaperone ClpB [Shewanella baltica OS183]
          Length = 857

 Score =  796 bits (2057), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/661 (57%), Positives = 518/661 (78%), Gaps = 21/661 (3%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  + +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGSLIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 260 KAVLNELAQEEGQVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATMSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR IQLK+E +A+ +E DE+S++
Sbjct: 380 YVSDRKLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRAIQLKLEEQALAKENDEASRR 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++E+  +E K + L +IW+ EK  +  +Q IK ++E+ R+ +  A R  D   +S
Sbjct: 440 RLDHLQEELRDVEAKASELNEIWRTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   SQ ++Q        TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLASQAEMQ------DMTLLRNKVTEFEIAEVLSKATGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQ+EA+ AV+NAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEVALHERVIGQNEAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+ E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKSLARFLFDTESALVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E   G  
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDIIQE---GFG 730

Query: 554 EI----IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
           ++    +K AVMN V   FRPEF+NRID+ +VF  L+  NI  IA+IQ+  L+ +L + +
Sbjct: 731 QVTYAEMKAAVMNVVTHSFRPEFLNRIDESVVFHPLDAANIKRIASIQIASLRQRLAEKD 790

Query: 610 MDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKG 669
             L+I+  AL  I+ IGFD +YGAR +   K++L     +   ++P A  +  GDL+   
Sbjct: 791 YTLEITDDALSLIAEIGFDPVYGARPL---KRAL-----QQEVENPLAQKLLRGDLLPGK 842

Query: 670 P 670
           P
Sbjct: 843 P 843


>gi|56708764|ref|YP_170660.1| ClpB protein [Francisella tularensis subsp. tularensis SCHU S4]
 gi|110671236|ref|YP_667793.1| ClpB protein [Francisella tularensis subsp. tularensis FSC198]
 gi|254371373|ref|ZP_04987374.1| ClpB protein [Francisella tularensis subsp. tularensis FSC033]
 gi|254875628|ref|ZP_05248338.1| clpB protein [Francisella tularensis subsp. tularensis MA00-2987]
 gi|379717990|ref|YP_005306326.1| ClpB protein [Francisella tularensis subsp. tularensis TIGB03]
 gi|379726593|ref|YP_005318779.1| ClpB protein [Francisella tularensis subsp. tularensis TI0902]
 gi|385795553|ref|YP_005831959.1| ClpB protein [Francisella tularensis subsp. tularensis NE061598]
 gi|421756433|ref|ZP_16193345.1| ClpB protein [Francisella tularensis subsp. tularensis 80700075]
 gi|56605256|emb|CAG46402.1| ClpB protein [Francisella tularensis subsp. tularensis SCHU S4]
 gi|110321569|emb|CAL09785.1| ClpB protein [Francisella tularensis subsp. tularensis FSC198]
 gi|151569612|gb|EDN35266.1| ClpB protein [Francisella tularensis subsp. tularensis FSC033]
 gi|254841627|gb|EET20063.1| clpB protein [Francisella tularensis subsp. tularensis MA00-2987]
 gi|282160088|gb|ADA79479.1| ClpB protein [Francisella tularensis subsp. tularensis NE061598]
 gi|377828042|gb|AFB81290.1| ClpB protein [Francisella tularensis subsp. tularensis TI0902]
 gi|377829667|gb|AFB79746.1| ClpB protein [Francisella tularensis subsp. tularensis TIGB03]
 gi|409084423|gb|EKM84599.1| ClpB protein [Francisella tularensis subsp. tularensis 80700075]
          Length = 859

 Score =  796 bits (2057), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/621 (59%), Positives = 509/621 (81%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP  +  KK+L LD+  LLAG K+RG+FE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 260 KSVLKELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+R
Sbjct: 320 REYVEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++++EI  L+ +Y  LE++WK EK  ++ + ++KEE+EK + ++ K  R  D   ++
Sbjct: 440 RLEILEQEIKGLDSEYKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE  +K+  + + +   N     L++T V   EIA++VS+ TGIPVSK+++
Sbjct: 500 ELQYGKIPELEAQIKQIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD  RP GSFMFLGPTGVGKTE
Sbjct: 556 GEKDKLLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+
Sbjct: 616 LTKALAEFLFDDEDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++D+FNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+  D 
Sbjct: 676 ILLDEVEKAHADIFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AVM  V  +FRPEF+NR+DD IVF  LN++ I  IA IQ+  L+ +L  +++ L+
Sbjct: 736 ETVKSAVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLE 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++  A+ K+++ GFD ++GAR
Sbjct: 796 VTTGAMDKLADAGFDPVFGAR 816


>gi|119470043|ref|ZP_01612848.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Alteromonadales bacterium
           TW-7]
 gi|392537038|ref|ZP_10284175.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Pseudoalteromonas marina
           mano4]
 gi|119446753|gb|EAW28026.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Alteromonadales bacterium
           TW-7]
          Length = 858

 Score =  796 bits (2057), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/622 (61%), Positives = 501/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP  L +K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+R
Sbjct: 320 RKYIEKDAALERRFQKVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLK+E  A+ +E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R   +++ I  L+ +Y  L++IW  EK  ++ +Q IK E+E+ RL ++ A R SD Q +S
Sbjct: 440 RRSEMQELITDLDGQYRELDEIWNAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L   SQ ++Q        TLLK +VG +EIAEI+SR TGIPVS+++Q
Sbjct: 500 ELQYGRIPELERKLDLASQAEMQ------DMTLLKNQVGEDEIAEILSRWTGIPVSRMLQ 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L  +V+GQDEA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEDRLHSKVIGQDEAVVAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LTKALAGFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E     D
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGNND 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM+ +   FRPEFINRID+ +VF  L  ++I  IA+IQL  L+ +L +M   L
Sbjct: 734 YATLKSKVMDVLISEFRPEFINRIDETVVFHPLANQHIKEIADIQLMKLRERLTEMGYLL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +IS AAL  I+  GFD +YGAR
Sbjct: 794 EISDAALDTIAASGFDPVYGAR 815


>gi|134301181|ref|YP_001121149.1| AAA ATPase [Francisella tularensis subsp. tularensis WY96-3418]
 gi|421750900|ref|ZP_16187962.1| AAA ATPase [Francisella tularensis subsp. tularensis AS_713]
 gi|421752757|ref|ZP_16189771.1| AAA ATPase [Francisella tularensis subsp. tularensis 831]
 gi|421756486|ref|ZP_16193394.1| AAA ATPase [Francisella tularensis subsp. tularensis 80700103]
 gi|421758352|ref|ZP_16195202.1| AAA ATPase [Francisella tularensis subsp. tularensis 70102010]
 gi|424673593|ref|ZP_18110529.1| AAA ATPase [Francisella tularensis subsp. tularensis 70001275]
 gi|134048958|gb|ABO46029.1| AAA superfamily ATPase clpB [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|409089432|gb|EKM89475.1| AAA ATPase [Francisella tularensis subsp. tularensis 831]
 gi|409089461|gb|EKM89503.1| AAA ATPase [Francisella tularensis subsp. tularensis AS_713]
 gi|409092604|gb|EKM92574.1| AAA ATPase [Francisella tularensis subsp. tularensis 70102010]
 gi|409093527|gb|EKM93468.1| AAA ATPase [Francisella tularensis subsp. tularensis 80700103]
 gi|417435757|gb|EKT90630.1| AAA ATPase [Francisella tularensis subsp. tularensis 70001275]
          Length = 859

 Score =  796 bits (2057), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/621 (59%), Positives = 509/621 (81%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP  +  KK+L LD+  LLAG K+RG+FE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 260 KSVLKELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+R
Sbjct: 320 REYVEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++++EI  L+ +Y  LE++WK EK  ++ + ++KEE+EK + ++ K  R  D   ++
Sbjct: 440 RLEILEQEIKGLDSEYKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE  +K+  + + +   N     L++T V   EIA++VS+ TGIPVSK+++
Sbjct: 500 ELQYGKIPELEAQIKQIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD  RP GSFMFLGPTGVGKTE
Sbjct: 556 GEKDKLLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+
Sbjct: 616 LTKALAEFLFDDEDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA++D+FNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+  D 
Sbjct: 676 ILLDEIEKAHADIFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AVM  V  +FRPEF+NR+DD IVF  LN++ I  IA IQ+  L+ +L  +++ L+
Sbjct: 736 ETVKSAVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLE 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++  A+ K+++ GFD ++GAR
Sbjct: 796 VTTEAMDKLADAGFDPVFGAR 816


>gi|187930962|ref|YP_001890946.1| chaperone ClpB [Francisella tularensis subsp. mediasiatica FSC147]
 gi|187711871|gb|ACD30168.1| chaperone ClpB [Francisella tularensis subsp. mediasiatica FSC147]
          Length = 859

 Score =  796 bits (2057), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/621 (59%), Positives = 509/621 (81%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP  +  KK+L LD+  LLAG K+RG+FE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 260 KSVLKELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+R
Sbjct: 320 REYVEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++++EI  L+ +Y  LE++WK EK  ++ + ++KEE+EK + ++ K  R  D   ++
Sbjct: 440 RLEILEQEIKGLDSEYKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE  +K+  + + +   N     L++T V   EIA++VS+ TGIPVSK+++
Sbjct: 500 ELQYGKIPELEAQIKQIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD  RP GSFMFLGPTGVGKTE
Sbjct: 556 GEKDKLLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+
Sbjct: 616 LTKALAEFLFDDEDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++D+FNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+  D 
Sbjct: 676 ILLDEVEKAHADIFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AVM  V  +FRPEF+NR+DD IVF  LN++ I  IA IQ+  L+ +L  +++ L+
Sbjct: 736 ETVKSAVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLE 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++  A+ K+++ GFD ++GAR
Sbjct: 796 VTTEAMDKLADAGFDPVFGAR 816


>gi|254371967|ref|ZP_04987460.1| ClpB protein [Francisella tularensis subsp. novicida GA99-3549]
 gi|151569698|gb|EDN35352.1| ClpB protein [Francisella novicida GA99-3549]
          Length = 859

 Score =  796 bits (2056), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/621 (59%), Positives = 509/621 (81%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP  +  KK+L LD+  LLAG K+RG+FE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 260 KSVLKELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+R
Sbjct: 320 REYVEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++++EI  L+ +Y  LE++WK EK  ++ + ++KEE+EK + ++ K  R  D   ++
Sbjct: 440 RLEILEQEIKGLDSEYKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE  +K+  + + +   N     L++T V   EIA++VS+ TGIPVSK+++
Sbjct: 500 ELQYGKIPELEAQIKQIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD  RP GSFMFLGPTGVGKTE
Sbjct: 556 GEKDKLLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+
Sbjct: 616 LTKALAEFLFDDEDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+  D 
Sbjct: 676 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AVM  V  +FRPEF+NR+DD IVF  LN++ I  IA IQ+  L+ +L  +++ L+
Sbjct: 736 ETVKSAVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLE 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++  A+ K+++ GFD ++GAR
Sbjct: 796 VTTDAMDKLADAGFDPVFGAR 816


>gi|208780138|ref|ZP_03247481.1| ATPase family associated with various cellular activities (AAA)
           protein [Francisella novicida FTG]
 gi|208744142|gb|EDZ90443.1| ATPase family associated with various cellular activities (AAA)
           protein [Francisella novicida FTG]
          Length = 859

 Score =  796 bits (2056), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/621 (59%), Positives = 509/621 (81%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP  +  KK+L LD+  LLAG K+RG+FE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 260 KSVLKELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+R
Sbjct: 320 REYVEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++++EI  L+ +Y  LE++WK EK  ++ + ++KEE+EK + ++ K  R  D   ++
Sbjct: 440 RLEILEQEIKGLDSEYKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE  +K+  + + +   N     L++T V   EIA++VS+ TGIPVSK+++
Sbjct: 500 ELQYGKIPELEAQIKQIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD  RP GSFMFLGPTGVGKTE
Sbjct: 556 GEKDKLLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+
Sbjct: 616 LTKALAEFLFDDEDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+  D 
Sbjct: 676 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AVM  V  +FRPEF+NR+DD IVF  LN++ I  IA IQ+  L+ +L  +++ L+
Sbjct: 736 ETVKSAVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLE 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++  A+ K+++ GFD ++GAR
Sbjct: 796 VTTDAMDKLADAGFDPVFGAR 816


>gi|89255534|ref|YP_512895.1| ClpB protein [Francisella tularensis subsp. holarctica LVS]
 gi|115314050|ref|YP_762773.1| endopeptidase Clp [Francisella tularensis subsp. holarctica OSU18]
 gi|156501472|ref|YP_001427537.1| AAA ATPase [Francisella tularensis subsp. holarctica FTNF002-00]
 gi|254366960|ref|ZP_04982997.1| clpB protein [Francisella tularensis subsp. holarctica 257]
 gi|290954297|ref|ZP_06558918.1| AAA family ATPase [Francisella tularensis subsp. holarctica URFT1]
 gi|422938054|ref|YP_007011201.1| chaperone clpB [Francisella tularensis subsp. holarctica FSC200]
 gi|423049840|ref|YP_007008274.1| AAA ATPase [Francisella tularensis subsp. holarctica F92]
 gi|89143365|emb|CAJ78535.1| ClpB protein [Francisella tularensis subsp. holarctica LVS]
 gi|115128949|gb|ABI82136.1| endopeptidase Clp [Francisella tularensis subsp. holarctica OSU18]
 gi|134252787|gb|EBA51881.1| clpB protein [Francisella tularensis subsp. holarctica 257]
 gi|156252075|gb|ABU60581.1| ATPase, AAA family [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|407293205|gb|AFT92111.1| chaperone clpB [Francisella tularensis subsp. holarctica FSC200]
 gi|421950562|gb|AFX69811.1| AAA ATPase [Francisella tularensis subsp. holarctica F92]
          Length = 859

 Score =  796 bits (2056), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/621 (59%), Positives = 509/621 (81%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP  +  KK+L LD+  LLAG K+RG+FE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 260 KSVLKELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+R
Sbjct: 320 REYVEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++++EI  L+ +Y  LE++WK EK  ++ + ++KEE+EK + ++ K  R  D   ++
Sbjct: 440 RLEILEQEIKGLDSEYKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE  +K+  + + +   N     L++T V   EIA++VS+ TGIPVSK+++
Sbjct: 500 ELQYGKIPELEAQIKQIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD  RP GSFMFLGPTGVGKTE
Sbjct: 556 GEKDKLLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+
Sbjct: 616 LTKALAEFLFDDEDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++D+FNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+  D 
Sbjct: 676 ILLDEVEKAHADIFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AVM  V  +FRPEF+NR+DD IVF  LN++ I  IA IQ+  L+ +L  +++ L+
Sbjct: 736 ETVKSAVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLE 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++  A+ K+++ GFD ++GAR
Sbjct: 796 VTTEAMDKLADAGFDPVFGAR 816


>gi|378775645|ref|YP_005177888.1| chaperone protein ClpB [Pasteurella multocida 36950]
 gi|356598193|gb|AET16919.1| chaperone protein ClpB [Pasteurella multocida 36950]
          Length = 855

 Score =  796 bits (2056), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/621 (59%), Positives = 495/621 (79%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 259 KAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 319 RQYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I++EIDSKP+ +D+LERR+IQLK+E +A+++E D++S+K
Sbjct: 379 YVSDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDDASRK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE +WK EK  +  +Q IK E++  + ++ +A R SD+  +S
Sbjct: 439 RLAMLEKELGEKEREYAELEDVWKAEKAALSGTQHIKAELDSAKTQMEQARRASDFAKMS 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L +    +        + TLL+ +V  EEIAE++SR TGIPV+K+++
Sbjct: 499 ELQYGVIPALEKQLAQAESAE------GKEMTLLRYRVTDEEIAEVLSRATGIPVAKMME 552

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRV+GQ EAI AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 553 GEKEKLLRMEEELHKRVIGQHEAIEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 612

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 613 LCKTLANFLFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 672

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+E    D 
Sbjct: 673 ILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENSTLDY 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI  IA IQL  L  ++      L 
Sbjct: 733 SSMKELVMSVVGQHFRPEFINRIDETVVFHPLGKENIREIATIQLARLIKRMESHGYQLH 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D +YGAR
Sbjct: 793 FTDACLDFIGEVGYDPVYGAR 813


>gi|254368513|ref|ZP_04984530.1| ClpB protein [Francisella tularensis subsp. holarctica FSC022]
 gi|157121407|gb|EDO65608.1| ClpB protein [Francisella tularensis subsp. holarctica FSC022]
          Length = 859

 Score =  796 bits (2055), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/621 (59%), Positives = 509/621 (81%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP  +  KK+L LD+  LLAG K+RG+FE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 260 KSVLKELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+R
Sbjct: 320 REYVEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++++EI  L+ +Y  LE++WK EK  ++ + ++KEE+EK + ++ K  R  D   ++
Sbjct: 440 RLEILEQEIKGLDSEYKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE  +K+  + + +   N     L++T V   EIA++VS+ TGIPVSK+++
Sbjct: 500 ELQYGKIPELEAQIKQIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD  RP GSFMFLGPTGVGKTE
Sbjct: 556 GEKDKLLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+
Sbjct: 616 LTKALAEFLFDDEDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++D+FNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+  D 
Sbjct: 676 ILLDEVEKAHADIFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AVM  V  +FRPEF+NR+DD IVF  LN++ I  IA IQ+  L+ +L  +++ L+
Sbjct: 736 ETVKSAVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLE 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++  A+ K+++ GFD ++GAR
Sbjct: 796 VTTEAMDKLADAGFDPVFGAR 816


>gi|359453754|ref|ZP_09243059.1| ATP-dependent Clp protease ATP-binding subunit ClpB
           [Pseudoalteromonas sp. BSi20495]
 gi|358049188|dbj|GAA79308.1| ATP-dependent Clp protease ATP-binding subunit ClpB
           [Pseudoalteromonas sp. BSi20495]
          Length = 858

 Score =  796 bits (2055), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/622 (61%), Positives = 502/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+R
Sbjct: 320 RKYIEKDAALERRFQKVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLK+E  A+ +E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRLQIDSKPESLDKLERRIIQLKLEDNALAKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R   +++ I  L+ +Y  L++IW  EK  ++ +Q IK E+E+ RL ++ A R SD Q +S
Sbjct: 440 RRAEMQELITDLDGQYRELDEIWNAEKASLQGTQVIKAELEQARLDLDVARRASDLQRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L   SQ ++Q      + TLLK +VG +EIAEI+SR TGIPVS+++Q
Sbjct: 500 ELQYGRIPELERKLDLASQAEMQ------EMTLLKNQVGEDEIAEILSRWTGIPVSRMLQ 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  +V+GQDEA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEEKLHGKVIGQDEAVVAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LTKALAGFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E     D
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAGNND 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM+ +   FRPEFINRID+ +VF  L  ++I  IA+IQL  L+ +L +M   L
Sbjct: 734 YTTLKAKVMDVLINEFRPEFINRIDETVVFHPLANEHIKEIADIQLMKLRERLTEMGYLL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +I+  AL++I+  GFD +YGAR
Sbjct: 794 EITDTALERIAASGFDPVYGAR 815


>gi|254876196|ref|ZP_05248906.1| chaperone clpB [Francisella philomiragia subsp. philomiragia ATCC
           25015]
 gi|254842217|gb|EET20631.1| chaperone clpB [Francisella philomiragia subsp. philomiragia ATCC
           25015]
          Length = 859

 Score =  796 bits (2055), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/621 (59%), Positives = 506/621 (81%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP  +  KK+L LD+  LLAG K+RG+FE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 260 KSVLKELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+R
Sbjct: 320 REYVEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ EI  LE +Y   E++WK EK  ++ + ++KEE+EK + ++ K  R  D   ++
Sbjct: 440 RLEILEAEIKGLESEYQGFEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRAGDLSKMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE  +K+    + +   N     L++T V   EIA++VS+ TGIPVSK+++
Sbjct: 500 ELQYGKIPELEAQIKQIENTEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD  RP GSFMFLGPTGVGKTE
Sbjct: 556 GEKDKLLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+
Sbjct: 616 LTKALAEFLFDDEDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+  D 
Sbjct: 676 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K AVM  V  +FRPEF+NRIDD IVF  LN++ I  IA IQ+  L+ +L  +N+ L+
Sbjct: 736 DTVKDAVMEMVLSHFRPEFVNRIDDAIVFEPLNKEMITEIAKIQIKRLEKRLRDLNIGLE 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++  A+ K+++ GFD ++GAR
Sbjct: 796 VTAKAMDKLADAGFDPVFGAR 816


>gi|383311735|ref|YP_005364545.1| chaperone protein ClpB [Pasteurella multocida subsp. multocida str.
           HN06]
 gi|386835582|ref|YP_006240901.1| chaperone ClpB [Pasteurella multocida subsp. multocida str. 3480]
 gi|380873007|gb|AFF25374.1| chaperone protein ClpB [Pasteurella multocida subsp. multocida str.
           HN06]
 gi|385202287|gb|AFI47142.1| chaperone ClpB [Pasteurella multocida subsp. multocida str. 3480]
          Length = 855

 Score =  796 bits (2055), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/621 (59%), Positives = 495/621 (79%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 259 KAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 319 RQYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I++EIDSKP+ +D+LERR+IQLK+E +A+++E D++S+K
Sbjct: 379 YVSDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDDASRK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE +WK EK  +  +Q IK E++  + ++ +A R SD+  +S
Sbjct: 439 RLAMLEKELGEKEREYAELEDVWKAEKAALSGTQHIKAELDSAKTQMEQARRASDFAKMS 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L +    +        + TLL+ +V  EEIAE++SR TGIPV+K+++
Sbjct: 499 ELQYGVIPALEKQLAQAESAE------GKEMTLLRYRVTDEEIAEVLSRATGIPVAKMME 552

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRV+GQ EAI AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 553 GEKEKLLRMEEELHKRVIGQHEAIEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 612

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 613 LCKTLANFLFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 672

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+E    D 
Sbjct: 673 ILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENSTLDY 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI  IA IQL  L  ++      L 
Sbjct: 733 PSMKELVMSVVGQHFRPEFINRIDETVVFHPLGKENIREIATIQLARLIKRMESHGYQLH 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D +YGAR
Sbjct: 793 FTDACLDFIGEVGYDPVYGAR 813


>gi|386022308|ref|YP_005940333.1| ClpB protein [Pseudomonas stutzeri DSM 4166]
 gi|327482281|gb|AEA85591.1| ClpB protein [Pseudomonas stutzeri DSM 4166]
          Length = 854

 Score =  796 bits (2055), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/621 (61%), Positives = 509/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLALDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I KLE +Y++LE+IWK EK  ++ S QI+++IE+ +  +  A RK D   ++
Sbjct: 440 RLAKLEDDIAKLEKEYSDLEEIWKSEKAEVQGSAQIQQKIEQAKADLEAARRKGDLARMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLEMVDQ------HGKKENQLLRNKVTDEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E++L  RV+GQ EA+ AV+NA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEDMLHTRVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L+DE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GD 
Sbjct: 674 VLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQEL-VGDP 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           +  + AVM+ V  +FRPEFINRID+++VF  L R+ I  IA IQL  L+ +L +  + L+
Sbjct: 733 DAQRAAVMDAVAHHFRPEFINRIDEVVVFDPLGREQIAGIAEIQLGRLRKRLAERELSLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ A+ K+  +G+D +YGAR
Sbjct: 793 LSQEAMDKLIAVGYDPVYGAR 813


>gi|15603569|ref|NP_246643.1| chaperone ClpB [Pasteurella multocida subsp. multocida str. Pm70]
 gi|425064424|ref|ZP_18467549.1| ClpB protein [Pasteurella multocida subsp. gallicida X73]
 gi|54035898|sp|Q9CKC0.1|CLPB_PASMU RecName: Full=Chaperone protein ClpB
 gi|12722113|gb|AAK03788.1| ClpB [Pasteurella multocida subsp. multocida str. Pm70]
 gi|404381174|gb|EJZ77657.1| ClpB protein [Pasteurella multocida subsp. gallicida X73]
          Length = 855

 Score =  796 bits (2055), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/621 (59%), Positives = 495/621 (79%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 259 KAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 319 RQYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I++EIDSKP+ +D+LERR+IQLK+E +A+++E D++S+K
Sbjct: 379 YVSDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDDASRK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE +WK EK  +  +Q IK E++  + ++ +A R SD+  +S
Sbjct: 439 RLAMLEKELGEKEREYAELEDVWKAEKAALSGTQHIKAELDSAKTQMEQARRASDFAKMS 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L +    +        + TLL+ +V  EEIAE++SR TGIPV+K+++
Sbjct: 499 ELQYGVIPALEKQLAQAESAE------GKEMTLLRYRVTDEEIAEVLSRATGIPVAKMME 552

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRV+GQ EAI AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 553 GEKEKLLRMEEELHKRVIGQHEAIEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 612

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 613 LCKTLANFLFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 672

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+E    D 
Sbjct: 673 ILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENSTLDY 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI  IA IQL  L  ++      L 
Sbjct: 733 PSMKELVMSVVGQHFRPEFINRIDETVVFHPLGKENIREIATIQLARLIKRMESHGYQLH 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D +YGAR
Sbjct: 793 FTDACLDFIGEVGYDPVYGAR 813


>gi|24375079|ref|NP_719122.1| stress-induced multi-chaperone system component ClpB [Shewanella
           oneidensis MR-1]
 gi|54035853|sp|Q8EBE6.1|CLPB_SHEON RecName: Full=Chaperone protein ClpB
 gi|24349835|gb|AAN56566.1| stress-induced multi-chaperone system component ClpB [Shewanella
           oneidensis MR-1]
          Length = 857

 Score =  795 bits (2054), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/661 (57%), Positives = 519/661 (78%), Gaps = 21/661 (3%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  + +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 260 KAVLNELAQEEGQVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGDLHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATMSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR IQLK+E +A+ +E DE+S++
Sbjct: 380 YVSDRKLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRAIQLKLEEQALAKENDEASRR 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++E+  +E K + L +IW+ EK  +  +Q IK ++E+ RL +  A R  D   +S
Sbjct: 440 RLDHLQEELRDVEAKASELSEIWRTEKAALAGTQHIKADLEQARLDLEVARRAGDLTRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   SQ ++Q        TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLASQAEMQ------DMTLLRNKVTDLEIAEVLSKATGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQ+EA+ AV+NAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEVALHERVIGQNEAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F++E +++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKSLARFLFDSESALVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E   G  
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDIIQE---GFG 730

Query: 554 EI----IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
            +    +K AVMN V   FRPEF+NRID+ +VF  L+ +NI  IA+IQ+  L+ +L + +
Sbjct: 731 HLSYSEMKSAVMNVVTHSFRPEFLNRIDESVVFHPLDAENIKHIASIQIASLRKRLAEKD 790

Query: 610 MDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKG 669
             L+I+  AL  I+ IGFD +YGAR +   K++L     +   ++P A  +  GDL+   
Sbjct: 791 YTLEITDEALSLIAEIGFDPVYGARPL---KRAL-----QQEMENPLAQKLLRGDLLPGK 842

Query: 670 P 670
           P
Sbjct: 843 P 843


>gi|307246005|ref|ZP_07528087.1| hypothetical protein appser1_12060 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|306852940|gb|EFM85163.1| hypothetical protein appser1_12060 [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
          Length = 857

 Score =  795 bits (2054), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/661 (56%), Positives = 524/661 (79%), Gaps = 12/661 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 258 KAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+I DPAIVAA+ LS+R
Sbjct: 318 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQIIDPAIVAAATLSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++
Sbjct: 378 YISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+   E +Y+ LE++WK EK+ +  +Q IK E+E  R+++++A R+++++ +S
Sbjct: 438 RLAKLDEELTAREREYSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L E  +++ +   N     LL+ KV  EEIAE++S+ TGIPVSK+++
Sbjct: 498 ELQYGKIPALEKQLHEAVKREEEGSEN----QLLRAKVTEEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L  RV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+E  + D 
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L + +I +IA IQL  L  +L +   ++ 
Sbjct: 734 AGMKEVVMSVVGQHFRPEFINRIDETVVFHPLGQAHIRAIARIQLQRLIARLAERGYEVT 793

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
           ++ AAL  I   GFD ++GAR +   K+++   L     ++P +  I  G L+   P  +
Sbjct: 794 VTDAALDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLSQQILSGKLLPNSPVVV 845

Query: 674 D 674
           D
Sbjct: 846 D 846


>gi|407070078|ref|ZP_11100916.1| chaperone ClpB protein [Vibrio cyclitrophicus ZF14]
          Length = 857

 Score =  795 bits (2054), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/622 (60%), Positives = 502/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGSLIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  + +II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELSKEEGNIILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK++V+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVIVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E DE+S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALTNENDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ E++  E  +A LE++W  EK  +  +Q IK E+E+ R+ ++ A R  D   +S
Sbjct: 440 RLRTLQSELSDKERDFAELEEVWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIA+++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDAEIADVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  VSNAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLKMEGVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+++++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFMFDSDDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFNTLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM  V  +FRPEF+NR+D+ +VF  L + +I SIA+IQL  LK ++ +   +L
Sbjct: 734 YQGIKNEVMEVVSKHFRPEFLNRVDESVVFHPLGQDHIQSIASIQLEHLKKRMEENGYEL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S  ALK IS +GFD +YGAR
Sbjct: 794 EVSDKALKLISQVGFDPVYGAR 815


>gi|387774041|ref|ZP_10129321.1| ATP-dependent chaperone protein ClpB [Haemophilus parahaemolyticus
           HK385]
 gi|386903128|gb|EIJ67948.1| ATP-dependent chaperone protein ClpB [Haemophilus parahaemolyticus
           HK385]
          Length = 857

 Score =  795 bits (2054), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/661 (57%), Positives = 525/661 (79%), Gaps = 12/661 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 258 KAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 318 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAAVLSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++
Sbjct: 378 YISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+   E +Y+ LE++WK EK+ +  +Q IK E+E  R+ + +A R+++ + +S
Sbjct: 438 RLAKLDEELTAKEREYSELEEVWKAEKSALLGTQHIKTELENARIAMEQARRENNLEKMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L+E  +++ +   N     LL+TKV  EEIAE++S+ TGIPVSK+++
Sbjct: 498 ELQYGKIPALEKQLQEAVKREEEGGEN----HLLRTKVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +E++L  RV+GQ+EA+ AVSNAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 GEKDKLLRMESVLHARVIGQNEAVEAVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++ ++++RIDMSEF+EKHS+SRL+GA PGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFLFDDPDAMVRIDMSEFMEKHSVSRLVGASPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+EM +   
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQEMPEATY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L +++I SIA IQL  L  ++ +   ++ 
Sbjct: 734 GELKEVVMSVVSQHFRPEFINRIDETVVFHSLGQEHIRSIARIQLERLIKRIAERGYEVT 793

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
           I+ AA+  I   GFD ++GAR +   K+++   L     ++P A  I  G L+   P  +
Sbjct: 794 ITDAAIDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLAQQILGGKLLPNRPVVV 845

Query: 674 D 674
           D
Sbjct: 846 D 846


>gi|330446996|ref|ZP_08310647.1| ATP-dependent chaperone ClpB [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491187|dbj|GAA05144.1| ATP-dependent chaperone ClpB [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 858

 Score =  795 bits (2054), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/622 (60%), Positives = 503/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIVNGEVPEGLRDKRVLSLDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S     +I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSQEDGRVILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLKIE +A+++E D++S K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKIEQQALEKEDDDASHK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E++  E +YA LE++W  EK  +  +Q IK E+E+ R  +  A R  D   +S
Sbjct: 440 RLSDLLEELDLKEREYAELEEVWNAEKAALSGTQHIKAELEQARTDVEIARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLLK KV   EIA+++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLKNKVTDTEIADVLSKATGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L  RV+GQDEA+ AV+NAIRRSR+GL+D +RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEDELHHRVIGQDEAVEAVANAIRRSRAGLADPQRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F++EE+++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKSLANFMFDSEEAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD+I+E     D
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDRIQEHFGNLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM  V  +FRPEFINR+D+ +VF  L ++NI +IA+IQ+  LK +L + +  L
Sbjct: 734 YDGIKALVMEVVGQHFRPEFINRVDETVVFHPLGKENIKNIASIQIERLKKRLAEKDYRL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            I  +AL  I+  GFD +YGAR
Sbjct: 794 DIDDSALDLIAEAGFDPVYGAR 815


>gi|418293836|ref|ZP_12905738.1| ClpB protein [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
 gi|379065221|gb|EHY77964.1| ClpB protein [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
          Length = 854

 Score =  795 bits (2054), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/621 (61%), Positives = 509/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLALDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQKI V+EP  E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKIQVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEA ++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAGSRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I KLE +YA+LE+IWK EK  ++ S QI+++IE+ + ++  A RK D   ++
Sbjct: 440 RLAKLEDDIAKLEREYADLEEIWKSEKAEVQGSAQIQQKIEQAKAELEAARRKGDLARMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLEMVDQ------HGKKENQLLRNKVTDEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E++L  RV+GQ EA+ AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEDMLHTRVIGQHEAVVAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L+DE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GD 
Sbjct: 674 VLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSTQIQEL-VGDP 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           +  + AVM+ V  +FRPEFINRID+++VF  L R+ I  IA IQL  L+ +L++  + L+
Sbjct: 733 DAQRAAVMDAVAHHFRPEFINRIDEVVVFDPLAREQIAGIAEIQLGRLRKRLVERELSLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ A+ K+  +G+D +YGAR
Sbjct: 793 LSQEAMDKLIAVGYDPVYGAR 813


>gi|417854553|ref|ZP_12499843.1| ClpB [Pasteurella multocida subsp. multocida str. Anand1_goat]
 gi|338217755|gb|EGP03595.1| ClpB [Pasteurella multocida subsp. multocida str. Anand1_goat]
          Length = 855

 Score =  795 bits (2053), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/621 (59%), Positives = 495/621 (79%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 259 KAVLNELSKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 319 RQYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I++EIDSKP+ +D+LERR+IQLK+E +A+++E D++S+K
Sbjct: 379 YVSDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDDASRK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +YA LE +WK EK  +  +Q IK E++  + ++ +A R SD+  +S
Sbjct: 439 RLAMLEKELGEKEREYAELEDVWKAEKAALSGTQHIKAELDSAKTQMEQARRASDFAKMS 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L +    +        + TLL+ +V  EEIAE++SR TGIPV+K+++
Sbjct: 499 ELQYGVIPALEKQLAQAESAE------GKEMTLLRYRVTDEEIAEVLSRATGIPVAKMME 552

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRV+GQ EAI AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 553 GEKEKLLRMEEELHKRVIGQHEAIEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 612

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 613 LCKTLANFLFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 672

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+E    D 
Sbjct: 673 ILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENSTLDY 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI  IA IQL  L  ++      L 
Sbjct: 733 PNMKELVMSVVGQHFRPEFINRIDETVVFHPLGKENIREIATIQLARLIKRMESHGYQLH 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D +YGAR
Sbjct: 793 FTDACLDFIGEVGYDPVYGAR 813


>gi|269101906|ref|ZP_06154603.1| ClpB protein [Photobacterium damselae subsp. damselae CIP 102761]
 gi|268161804|gb|EEZ40300.1| ClpB protein [Photobacterium damselae subsp. damselae CIP 102761]
          Length = 857

 Score =  795 bits (2053), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 502/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLA RI+NGEVP  L +K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLALRIVNGEVPEGLRNKRVLSLDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S     +I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSQEDGSVILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQY+EKD A ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYVEKDPALERRFQKVLVEEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLKIE +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKIEQQALEKESDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E++  E +YA LE++W  EK  +  +Q IK E+E+ R  +  A R  D   +S
Sbjct: 440 RLSDLLEELDLKEREYAELEEVWNAEKAALSGTQHIKAELEQARTDVEIARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLLK KV   EIA+++S+ TGIPV+K+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLKNKVTDTEIADVLSKATGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQ+EA+ AV+NAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEEELHRRVIGQNEAVEAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKSLANFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD+I+E     D
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDRIQEHFGSLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E +K  VM+ V  +FRPEFINR+D+ +VF  L + NI  IANIQL  L+ +L + +  L
Sbjct: 734 YEGLKALVMDVVGQHFRPEFINRVDETVVFHPLGQDNIKHIANIQLARLQKRLAEKDYRL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            + ++AL  I+  GFD +YGAR
Sbjct: 794 DVDESALDLIAEAGFDPVYGAR 815


>gi|359299621|ref|ZP_09185460.1| ATP-dependent Clp protease subunit B [Haemophilus [parainfluenzae]
           CCUG 13788]
          Length = 858

 Score =  795 bits (2053), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/661 (56%), Positives = 526/661 (79%), Gaps = 12/661 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 259 KAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 319 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++
Sbjct: 379 YISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQ 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+   E +Y+ LE++WK EK+ +  +Q IK E+E  R+ +++A R+++++ +S
Sbjct: 439 RLAKLDEELAAKEREYSELEEVWKAEKSALLGTQHIKTELENARIAMDQARRENNFEKMS 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L+E  +++ +   N     LL+TKV  EEIAE++S+ TGIPVSK+++
Sbjct: 499 ELQYGKIPALEKQLQEAVKREEEGSEN----HLLRTKVTDEEIAEVLSKATGIPVSKMME 554

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L  RV+GQ+EA+ AV+NAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 555 GEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 614

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 615 LCKTLASFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 674

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+E  +   
Sbjct: 675 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQEAPEASY 734

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L +++I +IA IQL  L  ++ +   ++ 
Sbjct: 735 AEMKALVMSVVGQHFRPEFINRIDETVVFHPLGQEHIRAIALIQLERLIKRMAERGYEVT 794

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
           ++  A+  I   GFD ++GAR +   K+++   L     ++P A  I  G L+   P  +
Sbjct: 795 VTDNAIDHIGKAGFDPLFGARPL---KRAIQQEL-----ENPLAQQILGGKLLPNRPVVV 846

Query: 674 D 674
           D
Sbjct: 847 D 847


>gi|359439012|ref|ZP_09228992.1| ATP-dependent Clp protease ATP-binding subunit ClpB
           [Pseudoalteromonas sp. BSi20311]
 gi|359444692|ref|ZP_09234463.1| ATP-dependent Clp protease ATP-binding subunit ClpB
           [Pseudoalteromonas sp. BSi20439]
 gi|358026246|dbj|GAA65241.1| ATP-dependent Clp protease ATP-binding subunit ClpB
           [Pseudoalteromonas sp. BSi20311]
 gi|358041528|dbj|GAA70712.1| ATP-dependent Clp protease ATP-binding subunit ClpB
           [Pseudoalteromonas sp. BSi20439]
          Length = 858

 Score =  795 bits (2053), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/622 (60%), Positives = 502/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGQVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+L+EEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA++LS+R
Sbjct: 320 RKYIEKDAALERRFQKVLIEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAAQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLKIE  A+ +E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRLQIDSKPEALDKLERRIIQLKIEDNALAKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R   + + I +LE++Y  L+++W  EK  ++ +Q IK E+E+ RL +  A R SD Q +S
Sbjct: 440 RRAEMVELITELEVQYRELDEVWNAEKASLQGTQVIKAELEQARLDLEVARRASDLQRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L   SQ ++Q      + +LLK +VG +EIAEI+SR TGIPV++++Q
Sbjct: 500 ELQYGRIPELERKLDLASQAEMQ------EMSLLKNQVGEDEIAEILSRWTGIPVARMLQ 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  +V+GQDEA+ AV+NAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEEQLHNKVIGQDEAVVAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ E +++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LTKALAGYMFDTESAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++F+N++I+MTSNLGSD I+E     D
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNSVIIMTSNLGSDIIQEQAGNND 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  VM  +   FRPEFINRID+ +VF  L   +I  IA+IQL+ L+ +L +M   L
Sbjct: 734 YDELKNKVMGVLHNEFRPEFINRIDETVVFHPLAHSHIKEIADIQLSKLRERLTEMGYLL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +++ AAL++I+  GFD +YGAR
Sbjct: 794 ELTDAALERIAASGFDPVYGAR 815


>gi|392545971|ref|ZP_10293108.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Pseudoalteromonas rubra ATCC
           29570]
          Length = 857

 Score =  795 bits (2053), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/622 (60%), Positives = 497/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKDKRVLSLDLGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+   +  +I+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELGKEEGRVILFIDEIHTMVGAGKTDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHSVDITDPAIVAAAQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLK+E  A+ +E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRLQIDSKPEQLDKLERRIIQLKLEDNALAKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R   ++  I +LE +Y  L+++W  EK  ++ +Q IK E+E+ RL +  A R SD Q +S
Sbjct: 440 RRSEMQTLIQQLETEYRELDEVWNAEKASLQGTQVIKAELEQARLDLEVARRASDLQRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L   SQ ++Q      + +LLK +VG +EIAEI+SR TGIPV+K++Q
Sbjct: 500 ELQYGRIPELERKLDLASQAEMQ------EMSLLKNQVGEDEIAEILSRWTGIPVAKMLQ 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L K+V+GQDEA+SAV+NAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLQMEDELHKKVIGQDEAVSAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LTKALAGFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+N +I+MTSNLGSD I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNAVIIMTSNLGSDVIQEQAGSND 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM+ +   FRPEFINRID+ +VF  L  ++I  IA+IQL  L+ +L       
Sbjct: 734 YATLKKRVMDVLVTQFRPEFINRIDETVVFHPLINEHIKQIADIQLAKLRQRLHDKGFGF 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +++ AAL KI+  GFD +YGAR
Sbjct: 794 ELTDAALDKIAASGFDPVYGAR 815


>gi|113971326|ref|YP_735119.1| ATPase [Shewanella sp. MR-4]
 gi|114048563|ref|YP_739113.1| ATPase [Shewanella sp. MR-7]
 gi|117921607|ref|YP_870799.1| ATPase [Shewanella sp. ANA-3]
 gi|113886010|gb|ABI40062.1| ATPase AAA-2 domain protein [Shewanella sp. MR-4]
 gi|113890005|gb|ABI44056.1| ATPase AAA-2 domain protein [Shewanella sp. MR-7]
 gi|117613939|gb|ABK49393.1| ATPase AAA-2 domain protein [Shewanella sp. ANA-3]
          Length = 857

 Score =  795 bits (2053), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/661 (57%), Positives = 519/661 (78%), Gaps = 21/661 (3%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  + +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 260 KAVLNELAQEEGQVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGDLHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATMSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR IQLK+E +A+ +E DE+S++
Sbjct: 380 YVSDRKLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRAIQLKLEEQALAKENDEASRR 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ E++++E K + L +IW+ EK  +  +Q IK ++E+ R+ +  A R  D   +S
Sbjct: 440 RLEHLRVELHEVEAKASELNEIWRTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   SQ ++Q        TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLASQAEMQ------DMTLLRNKVTDLEIAEVLSKATGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQ+EA+ AV+NAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEVALHERVIGQNEAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+ E +++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKSLAKFLFDTESALVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E   G  
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDIIQE---GFG 730

Query: 554 EI----IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
            +    +K AVMN V   FRPEF+NRID+ +VF  L+ +NI  IA+IQ+  L+ +L + +
Sbjct: 731 HLSYSEMKSAVMNVVTHSFRPEFLNRIDESVVFHPLDAENIKHIASIQIASLRKRLAEKD 790

Query: 610 MDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKG 669
             L+I+  AL  I+ IGFD +YGAR +   K++L     +   ++P A  +  GDL+   
Sbjct: 791 YTLEITDEALSLIAEIGFDPVYGARPL---KRAL-----QQEMENPLAQKLLRGDLLPGK 842

Query: 670 P 670
           P
Sbjct: 843 P 843


>gi|333367821|ref|ZP_08460054.1| chaperone protein ClpB [Psychrobacter sp. 1501(2011)]
 gi|332978323|gb|EGK15049.1| chaperone protein ClpB [Psychrobacter sp. 1501(2011)]
          Length = 862

 Score =  795 bits (2053), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/622 (58%), Positives = 505/622 (81%), Gaps = 1/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQ+I+NG+VP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQKIVNGDVPEGLRRKEVLSLDLGALIAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 257 KNVLNDLAKQEGNVILFIDELHTMVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+ +S+R
Sbjct: 317 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVDIQDSAIIAAARMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA+++++E+DSKPE + KL+ RLIQLK++ E +K E D  ++ 
Sbjct: 377 YITDRKLPDKAIDLVDEAASRLRMEMDSKPEALGKLDSRLIQLKMQREVLKNEEDAGAQA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
              ++ ++I +LE +YA+L +IW+ EK L+K SQQ+K+E++K R+  +KA+R+ D++T+S
Sbjct: 437 ERKVLDEQIEELEKEYADLNEIWQAEKALVKGSQQLKDELDKARIAYDKASREGDYETMS 496

Query: 314 KLKYGELNKLE-RILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIV 372
           KL+Y  + +LE RI +    +  +     ++  LL+ KV   EIAE+V+  TGIPV++++
Sbjct: 497 KLQYETIPQLEKRITESDLAEQKEQAGEGDRIKLLRNKVTDNEIAEVVAAATGIPVNRML 556

Query: 373 QVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKT 432
           Q EREK+L +E  L +RVVGQDEA+ +V+NA+RRSR+GLSD  RP GSF+FLGPTGVGKT
Sbjct: 557 QGEREKMLAMEERLHERVVGQDEAVQSVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKT 616

Query: 433 ELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYS 492
           EL K+L+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS
Sbjct: 617 ELTKSLANFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYS 676

Query: 493 LILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGD 552
           +IL DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+I+MTSNLGS KI+EM   D
Sbjct: 677 VILFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIIMTSNLGSHKIQEMAGDD 736

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E IK AVM  V  +FRPEF+NRID+I+VF  L    +  IA+IQLN L+++L +  MD+
Sbjct: 737 YEEIKSAVMESVGQHFRPEFVNRIDEIVVFHPLGMSQMAGIADIQLNRLRDRLKEREMDI 796

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           K+S  A+  +  +G+D +YGAR
Sbjct: 797 KLSPDAMHMLVAVGYDPVYGAR 818


>gi|88800775|ref|ZP_01116332.1| ATPase with chaperone activity, ATP-binding subunit [Reinekea
           blandensis MED297]
 gi|88776481|gb|EAR07699.1| ATPase with chaperone activity, ATP-binding subunit [Reinekea sp.
           MED297]
          Length = 858

 Score =  795 bits (2053), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/622 (61%), Positives = 491/622 (78%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP +L +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPENLKNKRVLSLDLGALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KAVLNELAKQEGQIILFIDELHTMVGAGKTDGAMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+ V EP+ E++I+ILRGL+++YEVHHGV ITD AI+AA  LS R
Sbjct: 320 RQYIEKDGALERRFQKVQVSEPNEEDSIAILRGLKERYEVHHGVTITDAAIIAAVRLSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDE+A++I++EIDSKPE MD+LERRLIQLKIE EA+K+E D  +K 
Sbjct: 380 YITDRQLPDKAIDLIDESASRIRMEIDSKPESMDRLERRLIQLKIEAEALKKESDPQAKS 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++  I   E +YA+LE+IW  EK  ++ SQ +KE++E+ R+ +  A R  D   +S
Sbjct: 440 RLEKLQVSIKDAEREYASLEEIWNTEKAAVQGSQHVKEQLEQARVDLEAARRAGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   SQ ++          LL  KV  E IA ++SR TGIPV K+++
Sbjct: 500 ELQYGRIPELEKQLDMASQAEMM------DMQLLHNKVTDESIANVISRWTGIPVDKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L  R+VGQ EA+ AVSNAIRRSRSGLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEEVLHSRLVGQHEAVVAVSNAIRRSRSGLSDPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+  E+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKSLAQFLFDTTEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD+I+ +  +  
Sbjct: 674 ILLDEVEKAHTDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDQIQNLAGEAH 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K AVM+ V  YFRPEFINR+D+++VF  L  + I  IA IQL  L  +L +  + L
Sbjct: 734 YDEMKAAVMDVVGGYFRPEFINRLDEVVVFHPLGSEQIRGIARIQLQYLHERLSEQELGL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +I ++ + K+   GFD +YGAR
Sbjct: 794 EIRESVMDKLCEAGFDPVYGAR 815


>gi|269140172|ref|YP_003296873.1| protein disaggregation chaperone [Edwardsiella tarda EIB202]
 gi|267985833|gb|ACY85662.1| protein disaggregation chaperone [Edwardsiella tarda EIB202]
          Length = 857

 Score =  795 bits (2053), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/625 (59%), Positives = 502/625 (80%), Gaps = 13/625 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDLAKQEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVYVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEALDRLERRIIQLKLEQQALKKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E  YA+LE+ WK EK  +  +Q IK EIE+ ++ + +A R  D   +S
Sbjct: 440 RLEILNTELEEKERDYASLEEEWKAEKAALTGTQNIKAEIEQAKIALEQARRSGDLAQMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG+L  LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 EIQYGKLPDLEKQLQAATQAE------GKSMKLLRNKVTDVEIAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L +RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEDELHRRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK----EME 549
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+    ++ 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQDRFGDLS 733

Query: 550 KGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
            G+   +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA IQL  L  +L +  
Sbjct: 734 YGE---MKELVMSVVTHHFRPEFINRIDETVVFHPLGQENIKAIARIQLQRLYQRLEEKG 790

Query: 610 MDLKISKAALKKISNIGFDLIYGAR 634
             + +S AAL+++S  GFD +YGAR
Sbjct: 791 YSISMSDAALEQLSQAGFDPVYGAR 815


>gi|261250366|ref|ZP_05942942.1| ClpB protein [Vibrio orientalis CIP 102891 = ATCC 33934]
 gi|417954665|ref|ZP_12597697.1| hypothetical protein VIOR3934_12715 [Vibrio orientalis CIP 102891 =
           ATCC 33934]
 gi|260939482|gb|EEX95468.1| ClpB protein [Vibrio orientalis CIP 102891 = ATCC 33934]
 gi|342814941|gb|EGU49872.1| hypothetical protein VIOR3934_12715 [Vibrio orientalis CIP 102891 =
           ATCC 33934]
          Length = 857

 Score =  795 bits (2052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/662 (57%), Positives = 516/662 (77%), Gaps = 17/662 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  + ++I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELSKEEGNVILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK++V+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVIVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALTNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+N  E  +A LE++W  EK  +  +Q IK E+E+ R+ +  A R  D   +S
Sbjct: 440 RLTILNDELNDKERAFAELEEVWNAEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIA+++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIADVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  V+NAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEEVLHKRVIGQTEAVEVVANAIRRSRAGLSDPNQPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFATLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  VM+ V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L  ++ +    L
Sbjct: 734 YQGMKEQVMDVVSKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLLRLSKRMEEKGYSL 793

Query: 613 KISKAALKKISNIGFDLIYGARDV-HGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
            +S+ AL  I+ +GFD +YGAR +    ++S+         ++P A  I  G +I   P 
Sbjct: 794 DVSEKALDLIAQVGFDPVYGARPLKRAIQQSV---------ENPLAKAILAGKVIPDKPV 844

Query: 672 SL 673
            L
Sbjct: 845 KL 846


>gi|343517922|ref|ZP_08754918.1| ATP-dependent chaperone protein ClpB [Haemophilus pittmaniae HK 85]
 gi|343394773|gb|EGV07320.1| ATP-dependent chaperone protein ClpB [Haemophilus pittmaniae HK 85]
          Length = 856

 Score =  795 bits (2052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/621 (59%), Positives = 499/621 (80%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVDEPSVEDTIAILRGLKERYEIHHHVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPEPLDRLERRIIQLKLEQQALQKEEDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE++  E +YA LE++WK EK  +  SQ IK+ ++  + ++ +A R  D   +S
Sbjct: 440 RLEMLEKELSDKEREYAELEEVWKSEKAALSGSQHIKQALDAAKTEMEQARRAGDLSKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L               + +LL+ +V  EEIAE++S+ TGIPV K+++
Sbjct: 500 ELQYGRIPELEKQLAAAE------TGEGKEMSLLRYRVTDEEIAEVLSKATGIPVFKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEELHKRVIGQEEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAKFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  +    
Sbjct: 674 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGSKDESY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L + NI +IA+IQL  L  ++     +L 
Sbjct: 734 GEMKALVMSVVSQHFRPEFINRIDETVVFHPLGKDNIRAIASIQLERLAKRMETRGYELV 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            ++A L  I  +G+D IYGAR
Sbjct: 794 FTEALLDFIGEVGYDPIYGAR 814


>gi|339495683|ref|YP_004715976.1| ClpB protein [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
 gi|338803055|gb|AEJ06887.1| ClpB protein [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
          Length = 854

 Score =  795 bits (2052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/621 (61%), Positives = 508/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLALDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I KLE +Y++LE+IWK EK  ++ S QI+++IE+ +  +  A RK D   ++
Sbjct: 440 RLAKLEDDIAKLEKEYSDLEEIWKSEKAEVQGSAQIQQKIEQAKADLEAARRKGDLARMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLEMVDQ------HGKKENQLLRNKVTDEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E++L  RV+GQ EA+ AV+NA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEDMLHTRVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L+DE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GD 
Sbjct: 674 VLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQEL-VGDP 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           +  + AVM+ V  +FRPEFINRID+++VF  L R+ I  IA IQL  L+ +L +  + L+
Sbjct: 733 DAQRAAVMDAVAHHFRPEFINRIDEVVVFDPLGREQIAGIAEIQLGRLRKRLAERELSLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ A+ K+  +G+D +YGAR
Sbjct: 793 LSQEAMDKLIAVGYDPVYGAR 813


>gi|387887315|ref|YP_006317614.1| chaperone ClpB [Francisella noatunensis subsp. orientalis str. Toba
           04]
 gi|386872131|gb|AFJ44138.1| chaperone ClpB [Francisella noatunensis subsp. orientalis str. Toba
           04]
          Length = 859

 Score =  795 bits (2052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/621 (59%), Positives = 505/621 (81%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP  +  KK+L LD+  LLAG K+RG+FE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S  + +II+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 260 KSVLKELSKQEGNIILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+R
Sbjct: 320 REYVEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDEATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ EI  LE +Y   E++WK EK  ++ + ++KEE+EK + ++ K  R  D   ++
Sbjct: 440 RLEILETEIKGLESEYQGFEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRAGDLSKMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE  +K+    + +   N     L++T V   EIA++VS+ TGIPVSK+++
Sbjct: 500 ELQYGKIPELEAQIKQIENTEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD  RP GSFMFLGPTGVGKTE
Sbjct: 556 GEKDKLLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E++++R+DMSEF+EKHS+++LIGAPPGY+GYE+GGYLTE VRRKPYS+
Sbjct: 616 LTKALAEFLFDDEDAMLRVDMSEFMEKHSVAKLIGAPPGYVGYEQGGYLTEHVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+  D 
Sbjct: 676 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K AVM  V  +FRPEF+NR+DD IVF  LN++ I  IA IQ+  L+ +L  +N+ L+
Sbjct: 736 NTVKDAVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLKDLNIGLE 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++  A+ K+++ GFD ++GAR
Sbjct: 796 VTAKAMDKLADAGFDPVFGAR 816


>gi|118498299|ref|YP_899349.1| chaperone clpB [Francisella novicida U112]
 gi|194323883|ref|ZP_03057658.1| ATPase, AAA family protein [Francisella novicida FTE]
 gi|118424205|gb|ABK90595.1| chaperone clpB [Francisella novicida U112]
 gi|194321780|gb|EDX19263.1| ATPase, AAA family protein [Francisella tularensis subsp. novicida
           FTE]
          Length = 859

 Score =  795 bits (2052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/621 (59%), Positives = 509/621 (81%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP  +  KK+L LD+  LLAG K+RG+FE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+S  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 260 KSVLKELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+R
Sbjct: 320 REYVEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++++EI  L+ +Y  LE++WK EK  ++ + ++KEE+EK + ++ K  R  D   ++
Sbjct: 440 RLEILEQEIKGLDSEYKGLEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRVGDLSKMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE  +K+  + + +   N     L++T V   EIA++VS+ TGIPVSK+++
Sbjct: 500 ELQYGKIPELEAQIKQIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD  RP GSFMFLGPTGVGKTE
Sbjct: 556 GEKDKLLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+
Sbjct: 616 LTKALAEFLFDDEDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+  D 
Sbjct: 676 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K AVM  V  +FRPEF+NR+DD IVF  LN++ I  IA IQ+  L+ +L  +++ L+
Sbjct: 736 DTVKDAVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLE 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++  A+ K+++ GFD ++GAR
Sbjct: 796 VTTEAMDKLADAGFDPVFGAR 816


>gi|385793710|ref|YP_005826686.1| hypothetical protein [Francisella cf. novicida Fx1]
 gi|332679035|gb|AEE88164.1| ClpB protein [Francisella cf. novicida Fx1]
          Length = 859

 Score =  795 bits (2052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/621 (59%), Positives = 507/621 (81%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP  +  KK+L LD+  LLAG K+RG+FE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 260 KSVLKELAKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+R
Sbjct: 320 REYVEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDEATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++++EI  LE +Y   E++WK EK  ++ + ++KEE+EK + ++ K  R  D   ++
Sbjct: 440 RLEILEEEIKGLESEYKGFEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRAGDLSKMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE  +K+    + +   N     L++T V   EIA++VS+ TGIPVSK+++
Sbjct: 500 ELQYGKIPELEAQIKQIENTEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD  RP GSFMFLGPTGVGKTE
Sbjct: 556 GEKDKLLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+
Sbjct: 616 LTKALAEFLFDDEDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+  D 
Sbjct: 676 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K AVM  V  +FRPEF+NR+DD IVF  LN++ I  IA IQ+  L+ +L  +++ L+
Sbjct: 736 DTVKDAVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLADLSIGLE 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++  A+ K+++ GFD ++GAR
Sbjct: 796 VTTEAMDKLADAGFDPVFGAR 816


>gi|83648559|ref|YP_436994.1| chaperone activity ATPase ATP-binding subunit [Hahella chejuensis
           KCTC 2396]
 gi|83636602|gb|ABC32569.1| ATPase with chaperone activity, ATP-binding subunit [Hahella
           chejuensis KCTC 2396]
          Length = 859

 Score =  795 bits (2052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/623 (60%), Positives = 510/623 (81%), Gaps = 8/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLALDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNELAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R++IEKDAA ERRFQK+LV+EP++E+TI+ILRGL+++YEVHHGVEITD AI+AA++LS+R
Sbjct: 320 REFIEKDAALERRFQKVLVDEPNVEDTIAILRGLKERYEVHHGVEITDSAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLK++ EA+K+E D +SKK
Sbjct: 380 YITDRQLPDKAIDLVDEAASQIRMEIDSKPEPLDRLERRLIQLKMQREALKKEKDAASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  +  +I+++E ++A+LE++W  EK  ++ +QQIK ++E+ R+ +  A R+ D   +S
Sbjct: 440 SVDELNTQIDEMEKEFADLEEVWSSEKAALQGTQQIKSQLEQARVDLENARRQGDLTRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   SQ ++       +  LL+ KV  EEIAEIVS+ TGIPV+K+++
Sbjct: 500 ELQYGRIPELEKQLDMASQAEML------EMRLLRNKVSEEEIAEIVSKWTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQDEA+ AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEEALHQRVIGQDEAVVAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKSLAGFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGSD I+ M   D+
Sbjct: 674 LLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIQAMGGQDE 733

Query: 554 EI--IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
               IK AV+  V  +FRPEFINRID+++VF  L  + I  IA IQL IL  +L + ++ 
Sbjct: 734 NYNEIKDAVLEVVGRHFRPEFINRIDEVVVFHPLTAEQIRGIALIQLEILNRRLQEQDLK 793

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           +++S  A+  ++ +GFD IYGAR
Sbjct: 794 VELSAEAMATLAEVGFDPIYGAR 816


>gi|146283954|ref|YP_001174107.1| ClpB protein [Pseudomonas stutzeri A1501]
 gi|145572159|gb|ABP81265.1| ClpB protein [Pseudomonas stutzeri A1501]
          Length = 854

 Score =  795 bits (2052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/621 (61%), Positives = 509/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLALDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I KLE +Y++LE+IWK EK  ++ S QI+++IE+ +  +  A RK D   ++
Sbjct: 440 RLAKLEDDIAKLEKEYSDLEEIWKSEKAEVQGSAQIQQKIEQAKADLEAARRKGDLARMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLEMVDQ------HGKKENQLLRNKVTDEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E++L  RV+GQ EA+ AV+NA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEDMLHTRVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L+DE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+++  GD 
Sbjct: 674 VLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSAQIQDL-VGDP 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           +  + AVM+ V  +FRPEFINRID+++VF  L R+ I  IA IQL  L+ +L +  + L+
Sbjct: 733 DAQRAAVMDAVAHHFRPEFINRIDEVVVFDPLGREQIAGIAEIQLGRLRKRLAERELSLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ A+ K+  +G+D +YGAR
Sbjct: 793 LSQEAMDKLIAVGYDPVYGAR 813


>gi|152997611|ref|YP_001342446.1| ATPase [Marinomonas sp. MWYL1]
 gi|150838535|gb|ABR72511.1| ATPase AAA-2 domain protein [Marinomonas sp. MWYL1]
          Length = 860

 Score =  795 bits (2052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 505/622 (81%), Gaps = 6/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L +K++L LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KALLNELAKQEGQVILFIDEIHTMVGAGKSEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LVEEP + ++I+ILRGL+++YEVHHGV+ITD AI+AA++LS R
Sbjct: 320 RQFIEKDAALERRFQKVLVEEPSVLDSIAILRGLKERYEVHHGVDITDSAIIAAAKLSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEA ++I++E+DSKPE MD+LERRLIQLKIE EA+K+E D++SK 
Sbjct: 380 YITDRQLPDKAIDLIDEAGSRIRMEMDSKPEDMDRLERRLIQLKIEKEALKKEKDKASKL 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +  EI+ L+ ++++LE+IW  EK  ++ +Q++KE++E VR ++ +A R  +   +S
Sbjct: 440 RLEELDVEIDNLQKQFSDLEEIWNAEKAAVQGAQKLKEDLETVRHEMEEARRSGNLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE  +++ S+ +        +  LLK +V  EEIA +VSR TGIP+ K+++
Sbjct: 500 ELQYGVIPMLEAEIEKASKAE-----ETTETRLLKRRVTEEEIATVVSRWTGIPIDKMLE 554

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L + V+GQDEA+ AVSNA+RRSRSGL+D  RP GSF+FLGPTGVGKTE
Sbjct: 555 GERDKLLRMEDALHESVMGQDEAVLAVSNAVRRSRSGLADPNRPNGSFLFLGPTGVGKTE 614

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+ E++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 615 LCKSLARFLFDTEQAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSV 674

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+E    D+
Sbjct: 675 LLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIQEYRSADQ 734

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E IK  VM  V ++FRPEFINRID+ +VF  L +  I  IA +QL+ L ++L +M M L
Sbjct: 735 YEEIKAKVMEVVGMHFRPEFINRIDETVVFHPLMKSQIKGIATVQLSHLNDRLAEMGMSL 794

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            ++ AA  ++  +G+D +YGAR
Sbjct: 795 VLTDAASDQLVEVGYDPVYGAR 816


>gi|218708596|ref|YP_002416217.1| chaperone ClpB protein [Vibrio splendidus LGP32]
 gi|218321615|emb|CAV17567.1| Chaperone clpB protein [Vibrio splendidus LGP32]
          Length = 857

 Score =  795 bits (2052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/622 (59%), Positives = 503/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IG+PGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGQPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGSLVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  + ++I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELSKEEGNVILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK++V+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVIVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E DE+S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALTNENDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ E+++ E  +A LE++W  EK  +  +Q IK E+E+ R+ ++ A R  D   +S
Sbjct: 440 RLRTLQSELSEKERDFAELEEVWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIA+++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDAEIADVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  VSNAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLKMEGVLHKRVIGQGEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSTRIQENFNTLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM  V  +FRPEF+NR+D+ +VF  L +++I SIA IQL  LK ++     +L
Sbjct: 734 YQGIKNEVMEVVGKHFRPEFLNRVDESVVFHPLGQEHIESIAAIQLEHLKMRMEDNGYEL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S+ ALK IS +GFD +YGAR
Sbjct: 794 EVSEKALKLISQVGFDPVYGAR 815


>gi|149907606|ref|ZP_01896353.1| clpB protein [Moritella sp. PE36]
 gi|149809276|gb|EDM69205.1| clpB protein [Moritella sp. PE36]
          Length = 857

 Score =  795 bits (2052), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/657 (58%), Positives = 514/657 (78%), Gaps = 21/657 (3%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K ++KE++  +   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVIKELAQTEGQTILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCMGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+L+EEP++E+TI+ILRGL+ +YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RKYIEKDAALERRFQKVLIEEPNVEDTIAILRGLKSRYELHHNVDITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++++DSKPE +DKLERR+IQLKIE +A+++E D +S K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRLQMDSKPEALDKLERRIIQLKIERQALEKEDDSASIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  I +E+ + + K+  L++IW+ EK  +  ++ IK  ++K R++++ A R SD   +S
Sbjct: 440 RLSTIAEELAEKQDKFNELDEIWRTEKAALSGTKHIKSALDKARVELDMARRASDLNKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L   +Q ++Q        TLLK KVG  EIA+I+SR TGIPV ++++
Sbjct: 500 ELQYGTIPMLEKQLDLAAQAEMQ------DMTLLKHKVGEAEIADILSRWTGIPVHRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L +RV+GQ EAIS VSNAIRRSR+GL+D  RP GSF+F+GPTGVGKTE
Sbjct: 554 GEKEKLLAMEDNLHQRVIGQAEAISVVSNAIRRSRAGLADPNRPMGSFLFMGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           +CK L+  IF++++++IR+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 VCKALADFIFDSDQAMIRLDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK-EMEKGD 552
           ILLDEIEKA+ D+FNILLQ+LDDGRLTD +GRT+NFRNT+I+MTSNLGSD I+ E  K D
Sbjct: 674 ILLDEIEKAHPDIFNILLQVLDDGRLTDGQGRTVNFRNTVIIMTSNLGSDIIQEEYGKHD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +KL ++  +   FRPEFINRIDD +VF  L R +I  IA IQL  L+ +L ++   L
Sbjct: 734 YNTVKLRLLELLGQSFRPEFINRIDDTVVFHPLGRSHIEKIAVIQLKSLEARLKQLGYSL 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPE---ANFIFLGDLI 666
            I+  AL K+++ GFD ++GAR            LK++ +K  E   AN I  GD++
Sbjct: 794 SITAGALAKLADAGFDPLFGARP-----------LKRVLQKQVENRLANAILAGDVV 839


>gi|167627089|ref|YP_001677589.1| chaperone ClpB [Francisella philomiragia subsp. philomiragia ATCC
           25017]
 gi|167597090|gb|ABZ87088.1| chaperone ClpB [Francisella philomiragia subsp. philomiragia ATCC
           25017]
          Length = 859

 Score =  794 bits (2051), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/621 (59%), Positives = 505/621 (81%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP  +  KK+L LD+  LLAG K+RG+FE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNDEVPEGVKGKKVLSLDMGALLAGAKFRGDFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K  LKE+S  + ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 260 KSALKELSKQEGNVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELKCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+R
Sbjct: 320 REYVEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE M+ L RR+IQLK++ E +K+E D+++KK
Sbjct: 380 YITDRQLPDKAIDLVDEAASQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDDATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ EI  LE +Y   E++WK EK  ++ + ++KEE+EK + ++ K  R  D   ++
Sbjct: 440 RLEILEAEIKGLESEYQGFEELWKAEKLKMQGTSKLKEELEKAKFELEKYQRAGDLSKMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE  +K+    + +   N     L++T V   EIA++VS+ TGIPVSK+++
Sbjct: 500 ELQYGKIPELEAQIKQIENTEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD  RP GSFMFLGPTGVGKTE
Sbjct: 556 GEKDKLLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+
Sbjct: 616 LTKALAEFLFDDEDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS +I+EM+  D 
Sbjct: 676 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHRIQEMQGQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K AVM  V  +FRPEF+NRIDD IVF  LN++ I  IA IQ+  L+ +L  +N+ L+
Sbjct: 736 DTVKDAVMEMVLSHFRPEFVNRIDDAIVFEPLNKEMITEIAKIQIKRLEKRLRDLNIGLE 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++  A+ K+++ GFD ++GAR
Sbjct: 796 VTAKAMDKLADAGFDPVFGAR 816


>gi|90580379|ref|ZP_01236186.1| putative clpB, ATPase with chaperone activity [Photobacterium
           angustum S14]
 gi|90438681|gb|EAS63865.1| putative clpB, ATPase with chaperone activity [Vibrio angustum S14]
          Length = 858

 Score =  794 bits (2051), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/622 (60%), Positives = 501/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIVNGEVPEGLRDKRVLSLDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S     +I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSQEDGRVILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLKIE +A+++E D +S K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKIEQQALEKEDDAASNK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            L  + +E++  E +YA LE++W  EK  +  +Q IK E+E+ R  +  A R  D   +S
Sbjct: 440 HLSDLLEELDLKEREYAELEEVWNAEKAALSGTQHIKAELEQARTDVEIARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLLK KV   EIA+++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLKNKVTDTEIADVLSKATGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L  RV+GQDEA+ AV+NAIRRSR+GL+D +RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEDELHHRVIGQDEAVVAVANAIRRSRAGLADPQRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F++EE+++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKSLANFMFDSEEAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD+I+E     D
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDRIQEHFGNLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E IK  VM  V  +FRPEFINR+D+ +VF  L ++NI +IA+IQL  LK +L + +  L
Sbjct: 734 YEGIKALVMEVVGQHFRPEFINRVDETVVFHPLGKENIKNIASIQLERLKKRLAEKDFRL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +  +AL  I+  GFD +YGAR
Sbjct: 794 DVGDSALDMIAEAGFDPVYGAR 815


>gi|387868692|ref|YP_005700161.1| chaperone ClpB [Edwardsiella tarda FL6-60]
 gi|304560005|gb|ADM42669.1| ClpB [Edwardsiella tarda FL6-60]
          Length = 809

 Score =  794 bits (2051), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/625 (59%), Positives = 502/625 (80%), Gaps = 13/625 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 152 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLSLDMGALIAGAKFRGEFEERL 211

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 212 KAVLNDLAKQEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 271

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 272 RQYIEKDAALERRFQKVYVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 331

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E DE+SKK
Sbjct: 332 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEALDRLERRIIQLKLEQQALKKESDEASKK 391

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E  YA+LE+ WK EK  +  +Q IK EIE+ ++ + +A R  D   +S
Sbjct: 392 RLEILNTELEEKERDYASLEEEWKAEKAALTGTQNIKAEIEQAKIALEQARRSGDLAQMS 451

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG+L  LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 452 EIQYGKLPDLEKQLQAATQAE------GKSMKLLRNKVTDVEIAEVLARWTGIPVSRMLE 505

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L +RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 506 GEREKLLRMEDELHRRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 565

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 566 LCKALANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 625

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK----EME 549
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+    ++ 
Sbjct: 626 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQDRFGDLS 685

Query: 550 KGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
            G+   +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA IQL  L  +L +  
Sbjct: 686 YGE---MKELVMSVVTHHFRPEFINRIDETVVFHPLGQENIKAIARIQLQRLYQRLEEKG 742

Query: 610 MDLKISKAALKKISNIGFDLIYGAR 634
             + +S AAL+++S  GFD +YGAR
Sbjct: 743 YSISMSDAALEQLSQAGFDPVYGAR 767


>gi|148652685|ref|YP_001279778.1| ATPase [Psychrobacter sp. PRwf-1]
 gi|148571769|gb|ABQ93828.1| ATPase AAA-2 domain protein [Psychrobacter sp. PRwf-1]
          Length = 862

 Score =  794 bits (2051), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 363/622 (58%), Positives = 504/622 (81%), Gaps = 1/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQ+I+NG+VP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQKIVNGDVPEGLRRKEVLSLDLGALIAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 257 KSVLNDLAKQEGNVILFIDELHTMVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+ +S+R
Sbjct: 317 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVDIQDSAIIAAARMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA+++++E+DSKPE + KL+ RLIQLK++ E +K E D  ++ 
Sbjct: 377 YITDRKLPDKAIDLVDEAASRLRMEMDSKPEALGKLDSRLIQLKMQREVLKNEEDAGAQA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
              ++ ++I +LE +YA+L +IW+ EK L+K SQQ+K+E++K R+  +KA+R+ D++T+S
Sbjct: 437 ERKVLDEQIEELEKEYADLNEIWQAEKALVKGSQQLKDELDKARIAYDKASREGDYETMS 496

Query: 314 KLKYGELNKLE-RILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIV 372
           KL+Y  + +LE RI +    +  +     N   LL+ KV   EIAE+V+  TGIPV++++
Sbjct: 497 KLQYETIPQLEKRITESDLAEQKEQTGEGNGIKLLRNKVTDNEIAEVVAAATGIPVNRML 556

Query: 373 QVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKT 432
           Q EREK+L +E  L +RVVGQDEA+ +V+NA+RRSR+GLSD  RP GSF+FLGPTGVGKT
Sbjct: 557 QGEREKMLTMEERLHERVVGQDEAVQSVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKT 616

Query: 433 ELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYS 492
           EL K+L+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS
Sbjct: 617 ELTKSLANFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYS 676

Query: 493 LILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGD 552
           +IL DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+I+MTSNLGS KI+EM   D
Sbjct: 677 VILFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIIMTSNLGSHKIQEMAGDD 736

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E IK +VM  V  +FRPEF+NRID+I+VF  L    +  IA+IQL+ L+++L +  MD+
Sbjct: 737 YEEIKASVMESVGQHFRPEFVNRIDEIVVFHPLGMSQMAGIADIQLDRLRSRLKEREMDI 796

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           K+S  A+  +  +G+D +YGAR
Sbjct: 797 KLSADAMHMLVAVGYDPVYGAR 818


>gi|85711023|ref|ZP_01042083.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
           [Idiomarina baltica OS145]
 gi|85694936|gb|EAQ32874.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
           [Idiomarina baltica OS145]
          Length = 856

 Score =  794 bits (2050), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/622 (59%), Positives = 501/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIG+PGVGKTAIVEGLAQRIIN EVP  L +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGDPGVGKTAIVEGLAQRIINAEVPEGLKNKRVLSLDLGALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKEEGRVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHSVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+++E D++SKK
Sbjct: 380 YISDRKLPDKAIDLIDEAASSIRMQIDSKPEDLDRLERRIIQLKLERQALQKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +  E+++LE KY  LE++W  EK  ++ +Q IK ++++VR +++ A R  D   +S
Sbjct: 440 RLEHLHDELDELEKKYGELEEVWNSEKAAVQGTQHIKSQLDQVRTEMDIARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER      Q D+ L       +LLK +V  EEIA+++SR TGIPVSK+++
Sbjct: 500 ELQYGRIPELER------QLDLALQAEMQDMSLLKNRVTDEEIADVLSRWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKL+ +E+LL KRVVGQ+EA+ AV+NAIRRSR+GL D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLVQMESLLHKRVVGQNEAVDAVANAIRRSRAGLGDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ +++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LSKALANFMFDTDDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+     + 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDLIQAHASDNS 733

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  VM+ +  +FRPEF+NR+D+ +VF  L R+ I SIA  QL  L  +L   +M +
Sbjct: 734 YDEMKAMVMDVLAGHFRPEFLNRVDETVVFHPLGREEIRSIAEAQLQRLYARLEDRDMSI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S  AL  I++ GFD ++GAR
Sbjct: 794 ELSVEALDFIASAGFDPVFGAR 815


>gi|392541242|ref|ZP_10288379.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Pseudoalteromonas piscicida
           JCM 20779]
          Length = 857

 Score =  794 bits (2050), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/622 (60%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L SK++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKSKRVLSLDVGALVAGVKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+ TM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGQVILFIDEIRTMVGAGKTDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHSVDITDPAIVAAANLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I+++IDSKPE +D+LERR+IQLK+E  A+ +E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRLQIDSKPEQLDRLERRIIQLKLEDNALAKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R   ++  IN+LE +Y  L+++W  EK  ++ +Q IK E+E+ RL +  A R SD Q +S
Sbjct: 440 RRTEMQTLINELEAEYRELDEVWNAEKASLQGTQVIKAELEQARLDLEVARRASDLQRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L   SQ ++Q      + +LLK +VG +EIAEI+SR TGIPV+K++Q
Sbjct: 500 ELQYGRIPELERKLDLASQAEMQ------EMSLLKNQVGEDEIAEILSRWTGIPVAKMLQ 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L K+V+GQDEA++AV+NAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEDELHKKVIGQDEAVNAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ E +++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LTKALANFMFDTEGAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+N +I+MTSNLGSD I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNAVIIMTSNLGSDVIQEQAGNND 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  +   FRPEFINRID+ +VF  L  ++I  IA+IQL+ L  +L +    L
Sbjct: 734 YATLKERVMGVLASQFRPEFINRIDETVVFHPLINEHIKEIASIQLDRLSKRLTEKGFAL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S AAL KI+  GFD +YGAR
Sbjct: 794 ELSDAALDKIAASGFDPVYGAR 815


>gi|344199838|ref|YP_004784164.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrivorans SS3]
 gi|343775282|gb|AEM47838.1| ATP-dependent chaperone ClpB [Acidithiobacillus ferrivorans SS3]
          Length = 866

 Score =  794 bits (2050), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 511/622 (82%), Gaps = 2/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLA R+INGEVP SL  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLALRLINGEVPESLRDKRLLGLDLGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++  ++  II+FIDE+H ++G GK EGS+DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KSLLNDLEKSEGKIILFIDEIHMLVGAGKAEGSMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R++IEKDAA ERRFQ++LV+EP +E+TI+ILRGL+++YE HHGV ITDPA+VAA++LS+R
Sbjct: 320 RKHIEKDAALERRFQRVLVDEPSVEDTIAILRGLKERYEAHHGVRITDPALVAAAQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++IK+EIDSKP+ +D+LERR+IQL IE  A+++E DE+S+K
Sbjct: 380 YITDRNLPDKAIDLMDEAASRIKMEIDSKPQELDELERRIIQLNIERVALEKEKDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ +I++L  KY  LE++WK EK  I+ + QI++E+++ R++++ A R +D + ++
Sbjct: 440 RLGILQTQISELGRKYQELEEVWKGEKLAIEGTSQIQKELDRKRVELDTARRANDLERMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+Y  +  LE  L+  ++   +   +  K TLL+T+VG EEIAE+V+R TGIPVSK+++
Sbjct: 500 ELQYSSIPALEAQLR-NAEIHAESAGSGAKPTLLRTEVGEEEIAEVVARWTGIPVSKMLE 558

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L  RVVGQ EA++AVSNAIRRSR+GLSD +RP GSF+FLGPTGVGKTE
Sbjct: 559 GEKEKLLKMEERLQARVVGQSEAVAAVSNAIRRSRAGLSDPRRPNGSFLFLGPTGVGKTE 618

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E+ ++R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 619 LSKALAEFLFDSEDHLVRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 678

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD+I+E   KGD
Sbjct: 679 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDRIQEFGRKGD 738

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +++AVM+ V+ +FRPEF+NRID++++F  L    +  I  IQ+  L+ +L + +M L
Sbjct: 739 YDGMRVAVMDVVQDHFRPEFLNRIDELVIFHPLTAVQLREITEIQMGFLRARLRERDMGL 798

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +S  AL +++ +G+D  YGAR
Sbjct: 799 VLSDGALDRLAEVGYDPAYGAR 820


>gi|254281898|ref|ZP_04956866.1| ATP-dependent chaperone ClpB [gamma proteobacterium NOR51-B]
 gi|219678101|gb|EED34450.1| ATP-dependent chaperone ClpB [gamma proteobacterium NOR51-B]
          Length = 860

 Score =  794 bits (2050), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/622 (61%), Positives = 503/622 (80%), Gaps = 9/622 (1%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAI+EGLAQR+INGEVP  L  K+IL LD+  LLAG K+RG+FE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIIEGLAQRVINGEVPEGLKDKRILSLDLGALLAGAKFRGDFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L E+S  +  +I+F+DELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYR
Sbjct: 261 AVLNELSKEEGRVILFVDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLNEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           QY+EKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V+ITD AI+AA+ LS RY
Sbjct: 321 QYVEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHSVDITDSAIIAAARLSQRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DR +PDKAIDLIDEAA++I++EIDSKPE MD+LERRLIQLKIE EA+K++  +++KK+
Sbjct: 381 ITDRQLPDKAIDLIDEAASRIRMEIDSKPESMDRLERRLIQLKIEREAVKKDVTDAAKKQ 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L L+ ++I  ++ +Y++LE++WK EK  ++ + Q+K +IE  ++ +  A R  D   +S+
Sbjct: 441 LELLDEQIELVQREYSDLEEVWKSEKAQVQGAAQVKADIESAKVDLEAARRAGDLTRMSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           ++YG + +LE+ L+     D   P      TLLK++V  EE+AE+VSR TGIPVSK+++ 
Sbjct: 501 IQYGVMPELEKRLQLADSSDAPEP------TLLKSRVTEEEVAEVVSRWTGIPVSKMLEG 554

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           +REKLL +E  L +RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTEL
Sbjct: 555 DREKLLRMELSLHERVVGQDEAVVAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTEL 614

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK+L+  +F++E++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL+
Sbjct: 615 CKSLAEYLFDSEQAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLL 674

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK- 553
           LLDE+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGSD I+EM  GD+ 
Sbjct: 675 LLDEVEKAHLDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIQEM-AGDEN 733

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E IK AVM  V  +FRPEFINR+D+ +VF  L  + I  IA IQL+ L+ +L   ++ L
Sbjct: 734 YEAIKAAVMGVVGTHFRPEFINRVDETVVFHPLKAEEIRGIAVIQLDSLRQRLADRDLGL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +S   L  +++ GFD +YGAR
Sbjct: 794 DLSPEVLDHLASAGFDPVYGAR 815


>gi|91794212|ref|YP_563863.1| ATPase AAA-2 [Shewanella denitrificans OS217]
 gi|91716214|gb|ABE56140.1| ATPase AAA-2 [Shewanella denitrificans OS217]
          Length = 862

 Score =  794 bits (2050), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/653 (58%), Positives = 515/653 (78%), Gaps = 15/653 (2%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIG+PGVGKTAIVEGLAQRI+NGEVP  + +K++L LD+  L+AG KYRGEFE+RLK
Sbjct: 201 NPVLIGDPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGALIAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L E+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EYR
Sbjct: 261 AVLNELSQEEGQVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           QYIEKDAA ERRFQK+LV EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RY
Sbjct: 321 QYIEKDAALERRFQKVLVNEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAASMSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           ISDR +PDKAIDLIDEAA+ I+++IDSKPE++D+LERR IQLK+E +A+ +E D++S+KR
Sbjct: 381 ISDRKLPDKAIDLIDEAASSIRMQIDSKPEVLDRLERRAIQLKLEEQALSKETDDASRKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L  ++ E+  +  K + L +IW  EK  +  +Q IK ++E+ R+ ++ A R  D   +S+
Sbjct: 441 LEHLQLELKDVSAKASELNEIWHTEKAALAGTQHIKADLEQARMDLDVARRAGDLTRMSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG + +LE+ L   SQ ++Q        TLL+ KV   EIAE++S+ TGIPVSK+++ 
Sbjct: 501 LQYGRIPELEKQLDLASQAEMQ------DMTLLRNKVTDIEIAEVLSKATGIPVSKMLEG 554

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           EREKLL +E+ L +RV+GQ EA+ AVSNAIRRSR+GL+D +RP GSF+FLGPTGVGKTEL
Sbjct: 555 EREKLLQMESALHERVIGQSEAVEAVSNAIRRSRAGLADPQRPIGSFLFLGPTGVGKTEL 614

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK+L+  +F+ E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+I
Sbjct: 615 CKSLAKFLFDTEAALVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTESVRRKPYSVI 674

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDK 553
           LLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E       
Sbjct: 675 LLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEGFGTLSY 734

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + +K AVMN V   FRPEF+NR+D+ +VF  L++++I  IA IQ+  L+ +L + + +L 
Sbjct: 735 QEMKAAVMNVVTHSFRPEFLNRVDESVVFHPLDKEDIKHIAGIQIGSLRKRLQEKDYELL 794

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
           ++ AAL  I+  GFD +YGAR +   K++L     +   ++P A+ +  G+L+
Sbjct: 795 VTDAALSLIAAAGFDPVYGARPL---KRAL-----QQQVENPLAHKLLRGELV 839


>gi|127513876|ref|YP_001095073.1| ATPase [Shewanella loihica PV-4]
 gi|126639171|gb|ABO24814.1| ATPase AAA-2 domain protein [Shewanella loihica PV-4]
          Length = 857

 Score =  794 bits (2050), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/662 (57%), Positives = 513/662 (77%), Gaps = 15/662 (2%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRIINGEVP  + +K++L LD+  L+AG KYRGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIINGEVPEGIKNKRVLSLDLGALVAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L E++  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EYR
Sbjct: 261 AVLNELAQEEGQVILFIDELHTMVGAGKSDGAMDAGNMLKPALARGDLHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           QYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+RY
Sbjct: 321 QYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAASMSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           ISDR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR IQLK+E +A+ +E DE+S +R
Sbjct: 381 ISDRKLPDKAIDLIDEAASSIRMQIDSKPEPLDRLERRTIQLKLEEQALSKESDEASLRR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L  ++ E+ ++E K A L ++W  EK  +  +Q IK ++E+ R+ +  A R  D   +S+
Sbjct: 441 LSTLRSELAEVEAKAAELNEVWHTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG + +LE+ L   +Q ++Q        TLL+ KV   EIAE++S+ TGIPVSK+++ 
Sbjct: 501 LQYGRIPELEKQLDLAAQAEMQ------DMTLLRNKVSDVEIAEVLSKATGIPVSKMLEG 554

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           E+EKLL++E  L  RV+GQ+EA+ AV+NAIRRSR+GL+D  RP GSF+FLGPTGVGKTEL
Sbjct: 555 EKEKLLHMEEALHTRVIGQNEAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTEL 614

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK+L+  +F+ E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+I
Sbjct: 615 CKSLAKFLFDTEAAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSVI 674

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDK 553
           LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E       
Sbjct: 675 LLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDVIQERFGIASY 734

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VMN V   FRPEF+NRID+ +VF  L  ++I  IA IQ++ LK +L + + +L+
Sbjct: 735 AEMKSEVMNVVTHSFRPEFLNRIDESVVFHPLESEHIAHIAQIQIDNLKARLAEKDFELE 794

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
           +S  AL  I+  GFD +YGAR +   K++L     +   ++P A  +  G+L+   P  +
Sbjct: 795 VSDDALALIAQAGFDPVYGARPL---KRAL-----QQEVENPLAQKLLSGELLPGAPIKV 846

Query: 674 DT 675
           D 
Sbjct: 847 DA 848


>gi|421618247|ref|ZP_16059225.1| ClpB protein [Pseudomonas stutzeri KOS6]
 gi|409779801|gb|EKN59452.1| ClpB protein [Pseudomonas stutzeri KOS6]
          Length = 854

 Score =  793 bits (2049), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/621 (60%), Positives = 509/621 (81%), Gaps = 7/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP+ L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPDGLKDKRLLALDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKQEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVTITDGAIIAAAKLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEA ++I++EIDSKPE +D+L+RRLIQLKIE EA+K+E DE+++K
Sbjct: 380 YITDRQLPDKAIDLIDEAGSRIRMEIDSKPEELDRLDRRLIQLKIEREALKKEDDEATRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I +LE +YA+LE+IWK EK  ++ S QI+++IE+ + ++  A RK D   ++
Sbjct: 440 RLAKLEDDIARLEREYADLEEIWKSEKAEVQGSAQIQQKIEQAKAELEAARRKGDLARMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER L+   Q      +   +  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLERSLEMVDQ------HGKKENQLLRNKVTDEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E++L  RV+GQ EA+ AV+NA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEDMLHTRVIGQHEAVVAVANAVRRSRAGLADPNRPSGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTEEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L+DE+EKA+ DVFN+LLQ+L+DGRLTD+ GRT++F+NT+IVMTSNLGS +I+E+  GD 
Sbjct: 674 VLMDEVEKAHPDVFNVLLQVLEDGRLTDSHGRTVDFKNTVIVMTSNLGSTQIQEL-VGDP 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           +  + AVM+ V  +FRPEFINRID+++VF  L R+ I  IA IQL  L+ +L +  + L+
Sbjct: 733 DAQRAAVMDAVAHHFRPEFINRIDEVVVFDPLAREQIAGIAEIQLGRLRKRLAERELSLE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S+ A+ K+  +G+D +YGAR
Sbjct: 793 LSQEAMDKLVAVGYDPVYGAR 813


>gi|260775122|ref|ZP_05884020.1| ClpB protein [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608823|gb|EEX34985.1| ClpB protein [Vibrio coralliilyticus ATCC BAA-450]
          Length = 857

 Score =  793 bits (2049), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 500/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRNKRVLSLDMGTLVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  + ++I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELSKEEGNVILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALTNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+   E  +A LE++W  EK  +  +Q IK E+E+ R+ +  A R  D   +S
Sbjct: 440 RLSNLNEELEDKERAFAELEEVWNAEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIA+++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIADVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L  RV+GQ EA+  VSNAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEEVLHARVIGQSEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFGSLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  VM  V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L  ++ +    L
Sbjct: 734 YQGMKEQVMEVVNKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLQRLSKRMEERGYAL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S  AL  I+ +GFD +YGAR
Sbjct: 794 EVSDKALDLIAQVGFDPVYGAR 815


>gi|157376629|ref|YP_001475229.1| ATPase [Shewanella sediminis HAW-EB3]
 gi|157319003|gb|ABV38101.1| ATPase AAA-2 domain protein [Shewanella sediminis HAW-EB3]
          Length = 857

 Score =  793 bits (2048), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 387/665 (58%), Positives = 514/665 (77%), Gaps = 21/665 (3%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  + +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGSLVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+   +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 260 KAVLNELYQEEGQVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGDLHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP++E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPNVEDTIAILRGLKERYELHHHVEITDPAIVAAASMSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+I+IDSKPE +DKLERR IQLK+E +A+ +E DE+S +
Sbjct: 380 YVSDRKLPDKAIDLIDEAASSIRIQIDSKPEPLDKLERRSIQLKLEEQALSKETDEASLR 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  I+KE+  ++ K + L +IW  EK  +  +Q IK ++E+ RL ++ A R SD   +S
Sbjct: 440 RLYSIRKELRSVDAKASELNEIWHTEKASLAGTQHIKADLEQARLDLDVARRASDLTRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   SQ ++Q        TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLASQAEMQ------DMTLLRNKVTDVEIAEVLSKATGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL++E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLHMEEALHSRVIGQNEAVDAVSNAIRRSRAGLSDPDRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ E +++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAKFLFDTESALVRIDMSEFMEKHSVARLLGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK----EME 549
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+    E+ 
Sbjct: 674 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDVIQDRFTELS 733

Query: 550 KGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
            G+   +K  VMN V   FRPEF+NRID+ +VF  L+ K+I  IA IQ+  L+ +L +  
Sbjct: 734 YGE---MKSEVMNVVVHSFRPEFLNRIDETVVFHPLDEKHIKHIAGIQIESLRQRLAEKE 790

Query: 610 MDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKG 669
            +L +S  AL  I+  GFD IYGAR +   K++L     +   ++P A  I  G L+   
Sbjct: 791 FELILSDEALALIARAGFDPIYGARPL---KRAL-----QQEVENPLAQKILSGSLVPGK 842

Query: 670 PQSLD 674
           P  +D
Sbjct: 843 PIKID 847


>gi|343498451|ref|ZP_08736487.1| hypothetical protein VITU9109_14823 [Vibrio tubiashii ATCC 19109]
 gi|418477074|ref|ZP_13046210.1| hypothetical protein VT1337_01810 [Vibrio tubiashii NCIMB 1337 =
           ATCC 19106]
 gi|342824423|gb|EGU58968.1| hypothetical protein VITU9109_14823 [Vibrio tubiashii ATCC 19109]
 gi|384575269|gb|EIF05720.1| hypothetical protein VT1337_01810 [Vibrio tubiashii NCIMB 1337 =
           ATCC 19106]
          Length = 857

 Score =  793 bits (2048), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/662 (56%), Positives = 516/662 (77%), Gaps = 17/662 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  + ++I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELSKEEGNVILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK++V+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVIVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+D++S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALTNEHDDASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E  +A LE++W  EK  +  +Q IK E+E+ R+ +  A R  D   +S
Sbjct: 440 RLTILNDELAEKERAFAELEEVWNAEKAALSGTQHIKSELEQARMDMEFARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIA+++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIADVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E++L KRV+GQ EA+  V+NAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEDVLHKRVIGQTEAVEVVANAIRRSRAGLSDPNQPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLASFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSTRIQENFGSLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  VM+ V  +FRPEF+NR+D+ +VF  L + +I SIA+IQL  L  ++ +    L
Sbjct: 734 YQGMKEQVMDVVGKHFRPEFLNRVDESVVFHPLGQDHIKSIASIQLERLSKRMEEKGYSL 793

Query: 613 KISKAALKKISNIGFDLIYGARDV-HGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
            +S  AL  I+ +GFD +YGAR +    ++S+         ++P A  I  G +I   P 
Sbjct: 794 DVSDKALDLIAQVGFDPVYGARPLKRAIQQSV---------ENPLAKAILAGKVIPDKPV 844

Query: 672 SL 673
            L
Sbjct: 845 KL 846


>gi|331006072|ref|ZP_08329408.1| ClpB protein [gamma proteobacterium IMCC1989]
 gi|330420109|gb|EGG94439.1| ClpB protein [gamma proteobacterium IMCC1989]
          Length = 887

 Score =  793 bits (2048), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/651 (58%), Positives = 507/651 (77%), Gaps = 36/651 (5%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI+EGLAQRI+NGEVP+ L  K++L LD+  LLAG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIIEGLAQRIVNGEVPDGLKDKRVLSLDLGSLLAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K ++ E+S  +  IIIFIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KAVINELSKQEGRIIIFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKD A ERRFQK+LVEEP   +TI+ILRGL+++YEVHHGV+ITD AI+AA++LS R
Sbjct: 320 RQFIEKDTALERRFQKVLVEEPSETDTIAILRGLKERYEVHHGVDITDSAIIAAAKLSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE +D+LERRLIQLKIE EA+K++ D++S+ 
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEALDRLERRLIQLKIEREAVKKDDDDASRL 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + K I  LE +Y +LE+IW  EK  +  + +IK  +E+ R+ ++ A R SD + +S
Sbjct: 440 RLASMDKSIVVLEKEYIDLEEIWNTEKVALHGTVEIKATLEQARVDMDAARRASDLERIS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   SQ D+       + TLL+ KV  EEIA++VS+ TGIPVSK+++
Sbjct: 500 QLQYGVIPELEKQLNAASQADVI------EMTLLRNKVTEEEIADVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E  L +RV+GQ++AI AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLSMETELHRRVIGQEQAIVAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++ ++++R+DMSEF+EKH+++RL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAEFLFDSPDAMVRLDMSEFMEKHAVARLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--- 550
           +LLDEIEKA+ DVFNILLQ+LDDGRLTD++GRT++FRNT+IVMTSNLGSD I+E+ +   
Sbjct: 674 LLLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVDFRNTVIVMTSNLGSDAIQEIGQNRS 733

Query: 551 ------------GDK---------------EIIKLAVMNEVKIYFRPEFINRIDDIIVFR 583
                       G+                + +K AVM  V  +FRPEFINRID+ +VF 
Sbjct: 734 FDNVSFDLPDLAGESTGSDGATDSANQHKYDAMKAAVMEVVVKHFRPEFINRIDEAVVFH 793

Query: 584 YLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 634
            L +  I  IA+IQL  LKN+L    +D+ ++   L K+S+ GFD +YGAR
Sbjct: 794 PLAKDQIRGIADIQLAGLKNRLADREIDITLTDQVLDKLSDAGFDPVYGAR 844


>gi|87122250|ref|ZP_01078133.1| endopeptidase Clp ATP-binding chain B (ClpB) [Marinomonas sp.
           MED121]
 gi|86162570|gb|EAQ63852.1| endopeptidase Clp ATP-binding chain B (ClpB) [Marinomonas sp.
           MED121]
          Length = 859

 Score =  793 bits (2047), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/622 (60%), Positives = 500/622 (80%), Gaps = 6/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRI+NGEVP  L +K++L LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIVNGEVPEGLKNKRVLSLDMAALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDE+HTM+G GK EGS+DAGNMLKP LSRGELHC+GATTL+EY
Sbjct: 260 KSLLTELSKQEGQIILFIDEIHTMVGAGKSEGSMDAGNMLKPALSRGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LVEEP + +TI+ILRGL+++YE+HHGV+ITD AI+AA++LS R
Sbjct: 320 RQFIEKDAALERRFQKVLVEEPSVADTIAILRGLKERYEIHHGVDITDSAIIAAAKLSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEA ++I++E+DSKPE MD+LERRLIQLKIE EA+K+E D +SK+
Sbjct: 380 YITDRQLPDKAIDLIDEAGSRIRMEMDSKPEDMDRLERRLIQLKIEKEALKKEKDRASKQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I   E ++++LE+IW  EK  ++ +Q++KEE+E VR ++ +A R  +   +S
Sbjct: 440 RLSKLEADIAIAEKQFSDLEEIWNAEKAQLQGAQKLKEELESVRQEMEEARRDGNLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE  +++ S     +    ++  LL+ +V  EE+A +VSR TGIPV K++Q
Sbjct: 500 ELQYGVIPMLEAEIEKAS-----MAEELDQTQLLRNRVSEEEVATVVSRWTGIPVDKMLQ 554

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +EN L   V+GQ+EA++AV+NA+RRSRSGL+D  RP GSF+FLGPTGVGKTE
Sbjct: 555 GEREKLLTMENELHASVIGQEEAVTAVANAVRRSRSGLADPNRPNGSFLFLGPTGVGKTE 614

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+ E S++R+DMSEF+EKHS++RLIG+PPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 615 LCKSLATFLFDTEASMVRVDMSEFMEKHSVARLIGSPPGYVGYEEGGYLTEAVRRRPYSV 674

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I+     ++
Sbjct: 675 LLLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDLIQNYRSNEQ 734

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E IK  V+  V  +FRPEFINRID+ +VF  L +  I  IA IQ+  L  +L +M M L
Sbjct: 735 YEEIKHDVLAVVGNHFRPEFINRIDETVVFHPLMQSQIHGIARIQMTHLNGRLQEMGMTL 794

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +S+ AL +++ +G+D +YGAR
Sbjct: 795 ALSEQALDRLAEVGYDPVYGAR 816


>gi|212558156|gb|ACJ30610.1| AAA ATPase, central region:Clp, N terminal [Shewanella
           piezotolerans WP3]
          Length = 857

 Score =  793 bits (2047), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/622 (60%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIIN EVP  + +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINNEVPEGIKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 260 KAVLNELSQEEGQVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGDLHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP++E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPNVEDTIAILRGLKERYELHHHVEITDPAIVAAASMSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+I+IDSKPE +DKLERR IQLK+E +A+ +E DE+S +
Sbjct: 380 YISDRKLPDKAIDLIDEAASSIRIQIDSKPESLDKLERRAIQLKLEEQAVSKEEDEASLR 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ E+ ++E K   L +IW  EK  +  +Q IK ++E+ R+ +  A R  D   +S
Sbjct: 440 RLDVLRSELKEVEGKAGELNEIWHTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q        TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------DMTLLRNKVTDIEIAEVLSKATGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L +RV+GQ+EA+ +VSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEDALHERVIGQNEAVDSVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+ E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKSLAKFLFDTESALVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+      +
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDAIQAGFGSQN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  VM  V  +FRPEF+NR+D+ +VF  LN++NI  IA+IQ++ LK +L   + +L
Sbjct: 734 YDEMKSNVMQVVTQHFRPEFLNRVDESVVFHPLNKENIAHIASIQIDGLKQRLADKDYEL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  AL  I+  G+D IYGAR
Sbjct: 794 SISDDALAIIAEAGYDPIYGAR 815


>gi|86148867|ref|ZP_01067123.1| ClpB protein, partial [Vibrio sp. MED222]
 gi|85833345|gb|EAQ51547.1| ClpB protein [Vibrio sp. MED222]
          Length = 757

 Score =  793 bits (2047), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 502/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IG+PGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 100 NNPVIIGQPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGSLVAGAKYRGEFEERL 159

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  + ++I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 160 KSVLNELSKEEGNVILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 219

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK++V+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 220 RQYIEKDPALERRFQKVIVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSHR 279

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E DE+S+K
Sbjct: 280 YVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALTNENDEASEK 339

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ E+++ E  +A LE++W  EK  +  +Q IK E+E+ R+ ++ A R  D   +S
Sbjct: 340 RLRTLQSELSEKERDFAELEEVWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMS 399

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIA+++S+ TGIPVSK+++
Sbjct: 400 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDAEIADVLSKQTGIPVSKMLE 453

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  VSNAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 454 AEKEKLLKMEGVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 513

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 514 LCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 573

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 574 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSTRIQENFNTLD 633

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM  V  +FRPEF+NR+D+ +VF  L +++I SIA IQL  LK ++     +L
Sbjct: 634 YQGIKNEVMEVVGKHFRPEFLNRVDESVVFHPLGQEHIESIAAIQLEHLKKRMEDNGYEL 693

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S  AL+ IS +GFD +YGAR
Sbjct: 694 EVSDKALRLISKVGFDPVYGAR 715


>gi|365539747|ref|ZP_09364922.1| ClpV protein [Vibrio ordalii ATCC 33509]
          Length = 858

 Score =  793 bits (2047), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 503/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGSLVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + ++I+FIDELHTM+G G+ EG++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGNVILFIDELHTMVGAGRGEGAMDAGNMLKPALARGDLHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALTNEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+   E ++A LE++W  EK  +  +Q IK E+E+ R+ ++ A R  D   +S
Sbjct: 440 RLQVLNEELKVKEREFAELEEVWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDVEIAEVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L +RV+GQ EA+  VSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 EEKEKLLQMEDALHQRVIGQVEAVEVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE +RRKPYS+
Sbjct: 614 LCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAIRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSQIQEKFASLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E IK  VM  V  +FRPEF+NR+D+ +VF  L ++ I SIA+IQL  L  ++ +    L
Sbjct: 734 YEGIKKEVMEIVGKHFRPEFLNRVDESVVFHPLAQEQIKSIASIQLARLGKRMEEKGYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S+ AL+ IS +GFD +YGAR
Sbjct: 794 EVSEKALELISQVGFDPVYGAR 815


>gi|421494136|ref|ZP_15941488.1| CLPB [Morganella morganii subsp. morganii KT]
 gi|455738463|ref|YP_007504729.1| ClpB protein [Morganella morganii subsp. morganii KT]
 gi|400191693|gb|EJO24837.1| CLPB [Morganella morganii subsp. morganii KT]
 gi|455420026|gb|AGG30356.1| ClpB protein [Morganella morganii subsp. morganii KT]
          Length = 857

 Score =  792 bits (2046), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/622 (59%), Positives = 503/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  LLAG KYRG+FE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGALLAGAKYRGDFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEA A +++++DSKPE +D+L+RR+IQLK+E +A+K+E D++SKK
Sbjct: 380 YITDRMLPDKAIDLIDEAGASLRMQMDSKPESLDRLDRRIIQLKLEQQALKKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++++E+ + E +YA+LE+ WK EK  +  +Q IK E+E+ +  + +A R  D   +S
Sbjct: 440 RLDMLEQELTEKEREYASLEEEWKAEKATLSGTQHIKAELEQAKTALEQARRTGDLTKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +  +        +  LL+ KV   EIAEI++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAANAAE------DKEMKLLRNKVTDVEIAEILARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E ++  RV+GQDEA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQVMHSRVIGQDEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALADFLFDSDDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD+I+E   + +
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDRIQEHFGELN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K AVM  V  +FRPEFINRID+++VF  L ++ I +IA IQL  L  +L +    +
Sbjct: 734 YDAMKGAVMEVVSHHFRPEFINRIDEVVVFHPLAKEQIHAIAKIQLKRLYKRLEEHGYQV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            I+ +AL K++  GFD ++GAR
Sbjct: 794 TITDSALDKLAEAGFDPVFGAR 815


>gi|253689510|ref|YP_003018700.1| ATP-dependent chaperone ClpB [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251756088|gb|ACT14164.1| ATP-dependent chaperone ClpB [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 857

 Score =  792 bits (2046), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/663 (57%), Positives = 521/663 (78%), Gaps = 17/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E DE+S+K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRIQIDSKPEPLDRLERRIIQLKLEQQALKKESDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L+  E+++ E +Y+  E+ WK EK  +  +Q IK  +E+ ++ + +A R+ D   +S
Sbjct: 440 RLELLSAELDQKEREYSQQEEEWKAEKASLTGTQNIKASLEQAKIALEQARRQGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q++           LL+ +V   EIA++++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATQQE------GKTMHLLRNRVTDVEIADVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L +RV+GQ+EA+ AV+N+IRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEKEKLLRMEDELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   E+ 
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERS 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E+  + V+  V   FRPEFINRID+++VF  L R +I SIA IQL  L  +L +    
Sbjct: 734 YTEMRDM-VLEVVSHNFRPEFINRIDEVVVFHPLGRAHITSIAKIQLQRLYKRLEERGYS 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           + I+ AAL  +  +GFD +YGAR +   K+++  L+     ++P A  I  G LI   P 
Sbjct: 793 VTITDAALDMLGEVGFDPVYGARPL---KRAIQQLI-----ENPLAQQILGGKLIPGKPI 844

Query: 672 SLD 674
           +LD
Sbjct: 845 TLD 847


>gi|336124918|ref|YP_004566966.1| ClpV protein [Vibrio anguillarum 775]
 gi|335342641|gb|AEH33924.1| ClpV protein [Vibrio anguillarum 775]
          Length = 863

 Score =  792 bits (2045), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 502/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 205 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGSLVAGAKYRGEFEERL 264

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + ++I+FIDELHTM+G G+ EG++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 265 KSVLNELAKEEGNVILFIDELHTMVGAGRGEGAMDAGNMLKPALARGDLHCVGATTLDEY 324

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 325 RQYIEKDPALERRFQKVLVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHR 384

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 385 YISDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALTNEHDEASEK 444

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+   E ++A LE++W  EK  +  +Q IK E+E+ R+ ++ A R  D   +S
Sbjct: 445 RLQVLNEELKVKEREFAELEEVWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMS 504

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+  V   EIAE++S+ TGIPVSK+++
Sbjct: 505 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNNVTDVEIAEVLSKQTGIPVSKMLE 558

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L +RV+GQ EA+  VSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 559 AEKEKLLQMEDALHQRVIGQVEAVEVVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 618

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE +RRKPYS+
Sbjct: 619 LCKTLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAIRRKPYSV 678

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 679 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSQIQEKFASLD 738

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E IK  VM  V  +FRPEF+NR+D+ +VF  L ++ I SIA+IQL  L  ++ +    L
Sbjct: 739 YEGIKKEVMEIVGKHFRPEFLNRVDESVVFHPLAQEQIKSIASIQLARLGKRMEEKGYQL 798

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S+ AL+ IS +GFD +YGAR
Sbjct: 799 EVSEKALELISQVGFDPVYGAR 820


>gi|294142195|ref|YP_003558173.1| clpB protein [Shewanella violacea DSS12]
 gi|293328664|dbj|BAJ03395.1| clpB protein [Shewanella violacea DSS12]
          Length = 857

 Score =  792 bits (2045), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/662 (58%), Positives = 514/662 (77%), Gaps = 15/662 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  + +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGSLVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+   +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 260 KAVLNELYQEEGQVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGDLHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LVEEP++E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S R
Sbjct: 320 RKYIEKDAALERRFQKVLVEEPNVEDTIAILRGLKERYELHHHVEITDPAIVAAASMSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+I+IDSKPE++DKLERR IQLKIE +A+ +E DE+S +
Sbjct: 380 YVSDRKLPDKAIDLIDEAASSIRIQIDSKPEVLDKLERRSIQLKIEEQALAKETDEASIR 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++KE+  ++ K A L +IW  EK  +  +Q IK ++E+ RL ++ A R SD   +S
Sbjct: 440 RLYSLRKELKDVDAKAAELNEIWHTEKAALAGTQHIKADLEQARLNLDVARRASDLTRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L   +Q ++Q        TLL+ KV   EIAE++SR TGIPV+K+++
Sbjct: 500 ELQYGRIPALEKQLDLAAQAEMQ------DMTLLRHKVTDVEIAEVLSRATGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLLN+E  L + V+GQ+EA+ AVSNAIRRSR+GL+D +RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLNMEEALHQTVIGQNEAVDAVSNAIRRSRAGLADPERPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+ E +++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE +RRKPYS+
Sbjct: 614 LCKSLAKFLFDTEAAMVRIDMSEFMEKHSVARLLGAPPGYVGYEEGGYLTEAIRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+       
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDIIQTRCGSLS 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VMN V   FRPEF+NRID+ +VF  L+ K+I  IANIQ+  L+ +L + + +L
Sbjct: 734 YSEMKAEVMNVVVHSFRPEFLNRIDETVVFHPLDEKHIEYIANIQIQALQQRLTEKDFEL 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
            IS+ AL  I+  GFD +YGAR +   K++L     +    +P A  I  G L+   P  
Sbjct: 794 IISEDALALIAKAGFDPVYGARPL---KRAL-----QQEVANPLAQRILSGSLVPGKPIK 845

Query: 673 LD 674
           L+
Sbjct: 846 LE 847


>gi|417949670|ref|ZP_12592802.1| chaperone ClpB protein [Vibrio splendidus ATCC 33789]
 gi|342807810|gb|EGU42988.1| chaperone ClpB protein [Vibrio splendidus ATCC 33789]
          Length = 857

 Score =  792 bits (2045), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/622 (59%), Positives = 501/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  + +II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELSKEEGNIILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKD A ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQHIEKDPALERRFQKVLVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E DE+S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALTNENDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ E++  E  +A LE++W  EK  +  +Q IK E+E+ R+ ++ A R  D   +S
Sbjct: 440 RLRTLQAELSDKERDFAELEEVWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIA+++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDAEIADVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  VSNAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLKMEGVLHKRVIGQGEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+++++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFMFDSDDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS KI+E     D
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSKIQENFNTLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM  V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L  ++     +L
Sbjct: 734 YQGIKNEVMEVVGKHFRPEFLNRVDESVVFHPLGQEHIKSIASIQLQHLSKRMEDNGYEL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S+ AL  I+ +GFD +YGAR
Sbjct: 794 EVSEKALDLIAQVGFDPVYGAR 815


>gi|374619251|ref|ZP_09691785.1| ATP-dependent chaperone ClpB [gamma proteobacterium HIMB55]
 gi|374302478|gb|EHQ56662.1| ATP-dependent chaperone ClpB [gamma proteobacterium HIMB55]
          Length = 873

 Score =  792 bits (2045), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/620 (60%), Positives = 499/620 (80%), Gaps = 6/620 (0%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAI+EGLAQR++NGEVP  L  K+IL LD+  LLAG K+RG+FE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIIEGLAQRVVNGEVPEGLKGKRILALDLGSLLAGAKFRGDFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L E+      +I+FIDELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 261 AVLNELGKEDGRVILFIDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           QY+EKDAA ERRFQ++LV+EP+ E+TI+ILRGL+++YEVHH V ITD AI+AA+ LS RY
Sbjct: 321 QYVEKDAALERRFQRVLVDEPNEEDTIAILRGLKERYEVHHSVAITDSAIIAAARLSQRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DR +PDKAIDLIDEAA++I++EIDSKPE MDKLERRLIQLKIE EA+K++  E++ K+
Sbjct: 381 ITDRQLPDKAIDLIDEAASRIRMEIDSKPESMDKLERRLIQLKIEREAVKKDTTEAAVKQ 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           + L+ ++I++++ ++A+LE++W  EK +++ S QIK +IE+ +  +  A R  D   +S+
Sbjct: 441 VELLDEQIDQVQREFADLEEVWTAEKAVVQGSAQIKSDIEQAKQDLEAAHRTGDLARMSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           ++YG + +LE+ L+     D   P      TLL+++V  +E+AE+VSR TGIPVSK+++ 
Sbjct: 501 IQYGVIPELEKRLEAAEGADQPEP------TLLRSRVTEDEVAEVVSRWTGIPVSKMLEG 554

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           +R +LL +E  L +RVVGQDEA++ V+NAIRRSR+GLSD KRP GSF+FLGPTGVGKTEL
Sbjct: 555 DRSRLLRMEASLKERVVGQDEAVTVVANAIRRSRAGLSDPKRPNGSFLFLGPTGVGKTEL 614

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK+L+  +F++++S++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS++
Sbjct: 615 CKSLAEFLFDSDQSMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSVL 674

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD I++M   D +
Sbjct: 675 LLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDIIQDMADDDYD 734

Query: 555 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 614
            +K  VM  V   FRPEFINRID+ +VF  L   +I +IA IQL  L  +L    + L+I
Sbjct: 735 DMKREVMGAVAENFRPEFINRIDESVVFHPLGADHIRAIAKIQLQGLAERLEDRELTLEI 794

Query: 615 SKAALKKISNIGFDLIYGAR 634
           S A  +++S +GFD ++GAR
Sbjct: 795 SDAVFEQLSRVGFDPVFGAR 814


>gi|392552078|ref|ZP_10299215.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Pseudoalteromonas spongiae
           UST010723-006]
          Length = 858

 Score =  792 bits (2045), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/622 (60%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGQVILFIDEIHTMVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHTVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I+++IDSKPE +D+LER++IQLK+E  A+ +E D++SK 
Sbjct: 380 YISDRQLPDKAIDLIDEAGSHIRMQIDSKPEELDRLERKIIQLKLEDNALAKETDDASKS 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R   I+ +I +L+ +Y  L+++W  EK  ++ +Q IK E+E+ RL +  A R  D Q +S
Sbjct: 440 RQADIQAQIKQLDSQYNELDEVWNAEKASLQGTQVIKTELEQARLDLEVARRAGDLQRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L   SQ ++Q        +LL  KVG  EIAEI+SR TGIPV+K++Q
Sbjct: 500 ELQYGRIPELERKLDLASQAEMQ------DMSLLVNKVGENEIAEILSRWTGIPVAKMLQ 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL++E  L ++VVGQDEA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLSMEAKLHEKVVGQDEAVVAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ EE+++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LTKALANFMFDTEEAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK-GD 552
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRTI+F+NT+I+MTSNLGSD I+E     D
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTIDFKNTVIIMTSNLGSDVIQEQASNND 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  +M+ +  +FRPEFINRID+ +VF  L + +I +IA IQL  L+ +L      L
Sbjct: 734 YQGLKNTLMSVIGQHFRPEFINRIDETVVFHPLAQAHIENIAKIQLQRLEQRLQDNGYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +++ AAL KI+  GFD ++GAR
Sbjct: 794 ELTDAALAKIAEAGFDPVFGAR 815


>gi|381402590|ref|ZP_09927274.1| protein disaggregation chaperone [Pantoea sp. Sc1]
 gi|380735789|gb|EIB96852.1| protein disaggregation chaperone [Pantoea sp. Sc1]
          Length = 857

 Score =  792 bits (2045), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/623 (59%), Positives = 502/623 (80%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLSDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALKKEADDASIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ E+N+ E +YA LE  WK EK  +  +Q IK E+E+ RL + +A R+ D   +S
Sbjct: 440 RLEMLESELNQKEREYAELEDEWKTEKASLSGTQNIKAELEQARLNLEQARRQGDLAQMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L   +Q +           LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGKIPALEKQLAAATQAE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEQELHGRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKSLANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E   + G
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQERFGDLG 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E +K  VM  V  +FRPEFINRID+++VF  L  K+I SIA IQL  L ++L +    
Sbjct: 734 YPE-MKEIVMGVVGQHFRPEFINRIDEVVVFHPLAEKHIASIAQIQLQRLYHRLEERGYQ 792

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L+IS+ AL+ ++  G+D +YGAR
Sbjct: 793 LQISEEALRLLAENGYDPVYGAR 815


>gi|410084770|ref|ZP_11281491.1| ClpB protein [Morganella morganii SC01]
 gi|409768415|gb|EKN52475.1| ClpB protein [Morganella morganii SC01]
          Length = 812

 Score =  791 bits (2044), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/622 (59%), Positives = 504/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  LLAG KYRG+FE+RL
Sbjct: 155 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGALLAGAKYRGDFEERL 214

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 215 KAVLNELSKEEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 274

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 275 RQYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 334

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEA A +++++DSKPE +D+L+RR+IQLK+E +A+K+E D++SKK
Sbjct: 335 YITDRMLPDKAIDLIDEAGASLRMQMDSKPESLDRLDRRIIQLKLEQQALKKESDDASKK 394

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++++E+ + E +YA+LE+ WK EK  +  +Q IK E+E+ +  + +A R  D   +S
Sbjct: 395 RLDMLEQELTEKEREYASLEEEWKAEKATLSGTQHIKAELEQAKTALEQARRTGDLTKMS 454

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +  + +      +  LL+ KV   EIAEI++R TGIPVS++++
Sbjct: 455 ELQYGKIPELEKQLAAANAAEDK------EMKLLRNKVTDVEIAEILARWTGIPVSRMLE 508

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E ++  RV+GQDEA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 509 GEREKLLRMEQVMHSRVIGQDEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 568

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 569 LCKALADFLFDSDDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSV 628

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD+I+E   + +
Sbjct: 629 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDRIQEHFGELN 688

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K AVM  V  +FRPEFINRID+++VF  L ++ I +IA IQL  L  +L +    +
Sbjct: 689 YDAMKGAVMEVVSHHFRPEFINRIDEVVVFHPLAKEQIHAIAKIQLKRLYKRLEEHGYQV 748

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            I+ +AL K++  GFD ++GAR
Sbjct: 749 TITDSALDKLAEAGFDPVFGAR 770


>gi|384085053|ref|ZP_09996228.1| clpB protein [Acidithiobacillus thiooxidans ATCC 19377]
          Length = 865

 Score =  791 bits (2044), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/622 (58%), Positives = 511/622 (82%), Gaps = 3/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLA R++NGEVP SL  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLALRMVNGEVPESLRDKRLLGLDLGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++  ++  II+FIDE+HT++G GK EGS+DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KALLTDLEKSEGKIILFIDEIHTLVGAGKAEGSMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQ++LV+EP +E++I+ILRGL+++YE HHGV ITDPA+VAA++LS+R
Sbjct: 320 RKYIEKDAALERRFQRVLVDEPSVEDSIAILRGLKERYEAHHGVRITDPALVAAAQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI DR +PDKAIDL+DEAA++IK+EIDSKP+ +D+LERR+IQL IE  A+++E DE+S K
Sbjct: 380 YIPDRNLPDKAIDLMDEAASRIKMEIDSKPQELDELERRIIQLNIERVALEKEKDEASLK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ +I  L+ KY +LE++WK EK  I+ + QI++E+++ R+ ++ A R +D + ++
Sbjct: 440 RLDILQSQIKDLDKKYQDLEEVWKGEKLTIEGTSQIQKELDRKRVDLDTARRANDLERMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+Y  +  LE  +K    +         K TLL+T+VG EEIAE+V+R TGIPVSK+++
Sbjct: 500 ELQYSVIPALEAQIKAAETQG--EGAKQTKLTLLRTEVGEEEIAEVVARWTGIPVSKMLE 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L  RVVGQ EA++AV+NAIRRSR+GLSD +RP GSF+FLGPTGVGKTE
Sbjct: 558 GEKEKLLKMEERLQARVVGQSEAVAAVANAIRRSRAGLSDPRRPNGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E+ ++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 618 LTKALAEFLFDSEDLLVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK-GD 552
           +LLDE+EKA++DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD+I+E  + G+
Sbjct: 678 VLLDEVEKAHADVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDRIQEFSRSGN 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +++AVM+ V+ +FRPEF+NRID++++F  L    +  I ++Q+  L+ +L + +MDL
Sbjct: 738 YDAMRVAVMDVVQDHFRPEFLNRIDEMVIFHPLTAVQLREITSLQMGALRARLKERDMDL 797

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +S+ AL +++ +G+D +YGAR
Sbjct: 798 LLSEGALDRLAEVGYDPVYGAR 819


>gi|374334801|ref|YP_005091488.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Oceanimonas
           sp. GK1]
 gi|372984488|gb|AEY00738.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Oceanimonas
           sp. GK1]
          Length = 857

 Score =  791 bits (2044), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/622 (59%), Positives = 503/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KALLNELAKEEGRVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQY+EKDAA ERRFQK+LV++P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYVEKDAALERRFQKVLVDQPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE S+K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRLQIDSKPEPLDRLDRRIIQLKLEEQALLKEDDEGSRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI+ E+ + E +YA LE++WK EK  +  +Q IK E+E+VR ++  A R SD   +S
Sbjct: 440 RLQLIRDELAEKEKEYAELEEVWKSEKAALAGTQHIKAELEQVRQELEVARRASDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      +  LLK +V  EEIA+++SR TGIPV+K+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EQHLLKNRVTDEEIADVLSRWTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L ++V+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+F+GPTGVGKTE
Sbjct: 554 GEKEKLLRMEDSLHEQVIGQNEAVDAVANAIRRSRAGLSDPNRPVGSFLFMGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALADFLFDSRDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSN+GSD I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNIGSDLIQEHSASKD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  +M  +   FRPEFINRID+I+VF  L +  I +IA IQL  L  +L  M+  +
Sbjct: 734 YDQMKAMLMEVLGHQFRPEFINRIDEIVVFHPLAQDQIKAIARIQLQGLVERLESMDYQV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS A L+K++  GFD ++GAR
Sbjct: 794 SISDALLEKLATAGFDPLFGAR 815


>gi|421080487|ref|ZP_15541408.1| Protein disaggregation chaperone [Pectobacterium wasabiae CFBP
           3304]
 gi|401704776|gb|EJS94978.1| Protein disaggregation chaperone [Pectobacterium wasabiae CFBP
           3304]
          Length = 858

 Score =  791 bits (2044), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/663 (57%), Positives = 522/663 (78%), Gaps = 17/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E DE+S+K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRIQIDSKPEPLDRLERRIIQLKLEQQALKKESDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L+  E+++ E +Y+  ++ WK EK  +  +Q IK  +E+ ++ + +A R+ D   +S
Sbjct: 440 RLELLSAELDQKEREYSQQDEEWKAEKASLTGTQNIKASLEQAKIVLEQARRQGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q++           LL+ +V   EIA++++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATQQE------GKTVHLLRNRVTDAEIADVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L +RV+GQ+EA+ AV+N+IRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEKEKLLRMEDELHRRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   E+ 
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERS 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E+  + V++ V   FRPEFINRID+++VF  L R +I SIA IQL  L  +L +    
Sbjct: 734 YTEMRDM-VLDVVSHSFRPEFINRIDEVVVFHPLGRAHITSIAQIQLQRLYKRLEERGYS 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           + I+ +AL  +  +GFD +YGAR +   K+++  L+     ++P A  I  G LI   P 
Sbjct: 793 VTIADSALDMLGEVGFDPVYGARPL---KRAIQQLI-----ENPLAQQILGGKLIPGKPI 844

Query: 672 SLD 674
           +LD
Sbjct: 845 TLD 847


>gi|119775735|ref|YP_928475.1| clpB protein [Shewanella amazonensis SB2B]
 gi|119768235|gb|ABM00806.1| clpB protein [Shewanella amazonensis SB2B]
          Length = 857

 Score =  791 bits (2044), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/662 (57%), Positives = 517/662 (78%), Gaps = 15/662 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  + +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAQEEGQVILFIDELHTMVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQY+EKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+R
Sbjct: 320 RQYVEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHHVEITDPAIVAAASMSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR IQLK+E +A+ +E DE+S+K
Sbjct: 380 YVSDRKLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRAIQLKLEEQALAKENDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ E+ ++E K   L +IW+ EK  +  +Q IK ++E+ R+ +  A R SD   +S
Sbjct: 440 RLEHLRHELKEVEAKANELNEIWRTEKAALAGTQHIKADLEQARMDLEVARRASDLTRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q         LL+ KV   EIAE++S+ TGIPV+K+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------DMKLLRNKVTDVEIAEVLSKATGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L +RV+GQ+EA+ AV+NAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEHALHERVIGQNEAVDAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+ E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKSLAKFLFDTESALVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDIIQERFGTLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VMN V   FRPEF+NRID+ +VF  L+ ++I +IA+IQ+  L+ +L +   +L
Sbjct: 734 YAQMKQEVMNVVVHSFRPEFLNRIDETVVFHPLDAEHIKNIASIQIESLRKRLAEREFEL 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
           ++S  AL  I+  GFD +YGAR +   K++L     +   ++P A  +  G+ I   P  
Sbjct: 794 ELSDEALAFIARAGFDPVYGARPL---KRAL-----QQEVENPLAQKLLRGEFIPGKPIR 845

Query: 673 LD 674
           +D
Sbjct: 846 VD 847


>gi|227329202|ref|ZP_03833226.1| protein disaggregation chaperone [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 858

 Score =  791 bits (2044), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/663 (57%), Positives = 520/663 (78%), Gaps = 17/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E DE+S+K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRIQIDSKPEPLDRLERRIIQLKLEQQALKKESDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L+  E+++ E +Y+  E+ WK EK  +  +Q IK  +E+ ++ + +A R+ D   +S
Sbjct: 440 RLELLSAELDQKEREYSQQEEEWKAEKASLTGTQNIKASLEQAKIALEQARRQGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q++           LL+ +V   EIA++++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATQQE------GKTMHLLRNRVTDVEIADVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L +RV+GQ+EA+ AV+N+IRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEKEKLLRMEDELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   E+ 
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERS 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E+  + V+  V   FRPEFINRID+++VF  L R +I SIA IQL  L  +L +    
Sbjct: 734 YTEMRDM-VLEVVSHNFRPEFINRIDEVVVFHPLGRAHITSIAQIQLQRLYKRLEERGYS 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           + I+ AAL  +  +GFD +YGAR +   K+++  L+     ++P A  I  G LI   P 
Sbjct: 793 VTITDAALDMLGEVGFDPVYGARPL---KRAIQQLI-----ENPLAQQILGGKLIPGKPI 844

Query: 672 SLD 674
           +LD
Sbjct: 845 TLD 847


>gi|192359582|ref|YP_001983648.1| chaperone ClpB [Cellvibrio japonicus Ueda107]
 gi|190685747|gb|ACE83425.1| ClpB [Cellvibrio japonicus Ueda107]
          Length = 892

 Score =  791 bits (2043), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/646 (59%), Positives = 514/646 (79%), Gaps = 32/646 (4%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  LLAG K+RGEFE+RL
Sbjct: 208 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKDKRLLALDLGALLAGAKFRGEFEERL 267

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K ++ E++  +  II+F+DELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 268 KSVINELAKQEGRIILFVDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 327

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV+ITD AI+AA++LS R
Sbjct: 328 RKYVEKDAALERRFQKVLVDEPGEEDTIAILRGLKERYEVHHGVDITDSAIIAAAKLSQR 387

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE MD+LERRLIQLKIE EA+K++ DE+SKK
Sbjct: 388 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEEMDRLERRLIQLKIEREAVKKDEDEASKK 447

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  I ++I+K+E +Y +LE+IW+ EK  ++ S +IK ++E+ RL++ +  RK D   +S
Sbjct: 448 RLAKIDQDIDKIEREYGDLEEIWRAEKAALQGSHEIKSQLEQARLELEEKRRKGDLARMS 507

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   SQ ++       +  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 508 ELQYGIIPQLEKQLDMASQAEMM------EMKLLRNKVTDEEIAEVVSKWTGIPVSKMLE 561

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L KRV+GQ EA+ AVSNA+RR+R+GLSDA RP GSF+FLGPTGVGKTE
Sbjct: 562 GEREKLLRMEEALHKRVIGQHEAVVAVSNAVRRARAGLSDANRPNGSFLFLGPTGVGKTE 621

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+  ++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 622 LCKALAEFLFDTSDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTESVRRKPYSV 681

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGSD+I+E+ + DK
Sbjct: 682 VLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSDRIQELAE-DK 740

Query: 554 EI-------------------------IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRK 588
                                      +K AVM  V  +FRPEFINRID+++VF  L R+
Sbjct: 741 SFDTVNFDFGVTDSMNSSLNNENRYNAMKDAVMEVVAGHFRPEFINRIDEVVVFHPLGRE 800

Query: 589 NILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 634
            I  IA+IQL  L+ +L + ++ L++  A +++++++GFD +YGAR
Sbjct: 801 QIRGIADIQLAQLRKRLAERDLGLELDAAVMERLASVGFDPVYGAR 846


>gi|262279691|ref|ZP_06057476.1| ATP-dependent chaperone ClpB [Acinetobacter calcoaceticus RUH2202]
 gi|262260042|gb|EEY78775.1| ATP-dependent chaperone ClpB [Acinetobacter calcoaceticus RUH2202]
          Length = 859

 Score =  791 bits (2043), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/623 (59%), Positives = 505/623 (81%), Gaps = 8/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L SK++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKSKRVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY  HHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D  SK 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDVGSKA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++K+I ++E +Y +LE+IWK EKTL++ ++Q + E++K R+   KA R+ D    +
Sbjct: 437 EVTHLEKQIAEVEKEYNDLEEIWKSEKTLVEGTKQAQVELDKARIAFEKAQREGDLAEAA 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ L+   Q ++   N   K  L++TKV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 RLQYGVIPELQKQLE---QDEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMLQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLLN+E  L  RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GEREKLLNMEGFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-- 551
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS  ++E+ +G  
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGAT 731

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E ++  VMN V  +FRPEFINRID++++F  L +  I  IA+IQL+ L+++L+  +M 
Sbjct: 732 DDE-VRTIVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMS 790

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +   A   + + GFD +YGAR
Sbjct: 791 LTVDDTAFDLLIDAGFDPVYGAR 813


>gi|429093582|ref|ZP_19156164.1| ClpB protein [Cronobacter dublinensis 1210]
 gi|426741478|emb|CCJ82277.1| ClpB protein [Cronobacter dublinensis 1210]
          Length = 861

 Score =  791 bits (2043), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 495/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 264 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 324 RQYIEKDAALERRFQKVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+ +E DE+SKK
Sbjct: 384 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLERRIIQLKLEQQALMKESDEASKK 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+N  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 444 RLDMLNDELNDKERQYSTLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 504 ELQYGKIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 558 SERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 618 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     D
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALD 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V   FRPEFINRID+++VF  L +++I SIA IQL  L  +L      +
Sbjct: 738 YASMKELVMGVVGQSFRPEFINRIDEVVVFHPLGQQHIASIAQIQLQRLYQRLEDRGYAV 797

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +IS  AL+ +   G+D +YGAR
Sbjct: 798 RISDEALQLLGENGYDPVYGAR 819


>gi|227115221|ref|ZP_03828877.1| protein disaggregation chaperone [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 858

 Score =  791 bits (2042), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/663 (57%), Positives = 520/663 (78%), Gaps = 17/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E DE+S+K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRIQIDSKPEPLDRLERRIIQLKLEQQALKKESDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L+  E+++ E +Y+  E+ WK EK  +  +Q IK  +E+ ++ + +A R+ D   +S
Sbjct: 440 RLELLSAELDQKEREYSQQEEEWKAEKASLTGTQNIKASLEQAKIALEQARRQGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q++           LL+ +V   EIA++++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATQQE------GKTMHLLRNRVTDVEIADVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L +RV+GQ+EA+ AV+N+IRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEKEKLLRMEDELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   E+ 
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERS 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E+  + V+  V   FRPEFINRID+++VF  L R +I SIA IQL  L  +L +    
Sbjct: 734 YTEMRDM-VLEVVSHSFRPEFINRIDEVVVFHPLGRAHITSIAQIQLQRLYKRLEERGYS 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           + I+ AAL  +  +GFD +YGAR +   K+++  L+     ++P A  +  G LI   P 
Sbjct: 793 VTITDAALDMLGEVGFDPVYGARPL---KRAIQQLI-----ENPLAQQMLGGKLIPGKPI 844

Query: 672 SLD 674
           +LD
Sbjct: 845 TLD 847


>gi|329895231|ref|ZP_08270895.1| ClpB protein [gamma proteobacterium IMCC3088]
 gi|328922469|gb|EGG29811.1| ClpB protein [gamma proteobacterium IMCC3088]
          Length = 856

 Score =  791 bits (2042), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/621 (60%), Positives = 502/621 (80%), Gaps = 7/621 (1%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  LLAG K+RG+FE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKDKRLLSLDLGALLAGAKFRGDFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L E+S  +  +I+F+DELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 261 SVLNELSKEEGRVILFVDELHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           QYIEKDAA ERRFQK+LV EP  ++TI+ILRGL+++YEVHH V+ITD AI+AA++LS RY
Sbjct: 321 QYIEKDAALERRFQKVLVNEPSEQDTIAILRGLKERYEVHHSVQITDSAIIAAAKLSQRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DR +PDKAIDLIDEAA++I++EIDSKPE MDKLERRLIQLKIE EA+KR+ D  +KK+
Sbjct: 381 ITDRQLPDKAIDLIDEAASRIRMEIDSKPESMDKLERRLIQLKIEREAVKRDTDAGAKKQ 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L  + K+I+++  +Y++LE+IWK EK  ++ + QIK +IE+ +L++  A R  D   +S+
Sbjct: 441 LEQLNKDIDQVGREYSDLEEIWKAEKAALQGAAQIKSDIEQAKLELESARRAGDLSRMSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG+L +LE++L +  Q +        +  LL+  V  EE+AE+VSR TGIPV+K+++ 
Sbjct: 501 LQYGKLPELEKLLTQAEQSE------QTERQLLRNNVTDEEVAEVVSRWTGIPVAKMLEG 554

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           +R+KLL +E+ L  RVVGQDEA+ AVS+A+RR+R+GLSD  RP GSF+FLGPTGVGKTEL
Sbjct: 555 DRDKLLRMEDALHDRVVGQDEAVRAVSDAVRRARAGLSDPNRPNGSFLFLGPTGVGKTEL 614

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK+L+  +F++E++++RIDMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRR+PYSL+
Sbjct: 615 CKSLANFLFDSEQAMVRIDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEAVRRRPYSLL 674

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK- 553
           LLDE+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT++VMTSNLGSD I+EM   +  
Sbjct: 675 LLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVVVMTSNLGSDVIQEMAGEENY 734

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K AVM  V  +FRPEFINR+D+ +VF  L +  I  IA IQL+ L+ +L   ++ L+
Sbjct: 735 AAMKQAVMAIVGNHFRPEFINRVDESVVFHPLAQAQIRGIAEIQLSGLRARLQAQDIQLE 794

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S A L  ++  GFD +YGAR
Sbjct: 795 VSVALLDHLATAGFDPVYGAR 815


>gi|254482819|ref|ZP_05096056.1| ATP-dependent chaperone ClpB [marine gamma proteobacterium
           HTCC2148]
 gi|214036900|gb|EEB77570.1| ATP-dependent chaperone ClpB [marine gamma proteobacterium
           HTCC2148]
          Length = 854

 Score =  791 bits (2042), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/622 (61%), Positives = 513/622 (82%), Gaps = 9/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI+EGLAQR+INGEVP  L  K+IL LD+  LLAG K+RGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIIEGLAQRVINGEVPEGLKDKRILSLDLGSLLAGAKFRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 258 KSVLNELSKEEGRVILFIDEMHTMVGAGKAEGSMDAGNMLKPALARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQY+EKDAA ERRFQK+LVEEP+ E+TI+ILRGL+++YEVHHGV+ITD AI+AA++LS R
Sbjct: 318 RQYVEKDAALERRFQKVLVEEPNEEDTIAILRGLKERYEVHHGVDITDSAIIAAAKLSQR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE MDKLERRLIQLKIE EA+K+  DE++K+
Sbjct: 378 YITDRQLPDKAIDLVDEAASRIRMEIDSKPEAMDKLERRLIQLKIEREAVKK--DETAKE 435

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           ++  + ++I  +E ++++LE++WK EK  ++ S Q+K ++E+V+L++  A R  D   +S
Sbjct: 436 QVKHLDEQIEVVEREFSDLEEVWKAEKASLQGSAQVKSDLEQVKLEMESARRAGDLTKMS 495

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE+ L+E      Q+     + TLL+ KV  EE+AE+VSR TGIP+SK+++
Sbjct: 496 ELQYGKLPELEKQLEEA-----QVAETV-EHTLLRNKVTEEEVAEVVSRWTGIPISKMLE 549

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            +REKLL +E+ L  RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 550 GDREKLLRMEDELHSRVVGQDEAVVAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 609

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E++++R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL
Sbjct: 610 LCKALAEFLFDSEQAMVRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSL 669

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGS  I+EM   D 
Sbjct: 670 LLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSHLIQEMASEDN 729

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E +K AVM+ V  +FRPEFINR+D+ +VF  L +  I  IA+IQL  L+++L +  ++L
Sbjct: 730 YEKMKSAVMDVVGTHFRPEFINRVDESVVFHPLLQSQIRGIADIQLRGLESRLAERELNL 789

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +IS+A ++ ++  GFD +YGAR
Sbjct: 790 EISEAFMEHLTVAGFDPVYGAR 811


>gi|401764807|ref|YP_006579814.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
           cloacae ENHKU01]
 gi|400176341|gb|AFP71190.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
           cloacae ENHKU01]
          Length = 857

 Score =  790 bits (2041), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/654 (57%), Positives = 514/654 (78%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+      Q +I   +      LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEK------QLEIATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 734 YGHMKDLVMGVVSHSFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            IS  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+LI
Sbjct: 794 HISDDALKLLSENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839


>gi|299770934|ref|YP_003732960.1| ATP-dependent chaperone ClpB [Acinetobacter oleivorans DR1]
 gi|298701022|gb|ADI91587.1| ATP-dependent chaperone ClpB [Acinetobacter oleivorans DR1]
          Length = 859

 Score =  790 bits (2041), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/623 (59%), Positives = 505/623 (81%), Gaps = 8/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L SK++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKSKRVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY  HHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D  SK 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDVGSKA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++K+I ++E +Y +LE+IWK EKTL++ ++Q + E++K R+   KA R+ D    +
Sbjct: 437 EVNHLEKQIAEVEKEYNDLEEIWKSEKTLVEGTKQAQVELDKARIAFEKAQREGDLAEAA 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ L+   Q ++   N   K  L++TKV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 RLQYGVIPELQKQLE---QDEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMMQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLLN+E  L  RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GEREKLLNMEEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-- 551
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS  ++E+ +G  
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGAT 731

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E ++  VMN V  +FRPEFINRID++++F  L +  I  IA+IQL+ L+++L+  +M 
Sbjct: 732 DDE-VRTIVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMS 790

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +   A   + + GFD +YGAR
Sbjct: 791 LTVDDTAFDLLIDAGFDPVYGAR 813


>gi|261820453|ref|YP_003258559.1| protein disaggregation chaperone [Pectobacterium wasabiae WPP163]
 gi|261604466|gb|ACX86952.1| ATP-dependent chaperone ClpB [Pectobacterium wasabiae WPP163]
          Length = 858

 Score =  790 bits (2041), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/663 (57%), Positives = 521/663 (78%), Gaps = 17/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E DE+S+K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRIQIDSKPEPLDRLERRIIQLKLEQQALKKESDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L+  E+++ E +Y+  ++ WK EK  +  +Q +K  +E+ ++ + +A R+ D   +S
Sbjct: 440 RLELLSAELDQKEREYSQQDEEWKAEKASLTGTQNVKASLEQAKIALEQARRQGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q++           LL+ +V   EIA++++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATQQE------GKTVHLLRNRVTDAEIADVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L +RV+GQ+EA+ AV+N+IRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEKEKLLRMEDELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   E+ 
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERS 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E+  + V++ V   FRPEFINRID+++VF  L R +I SIA IQL  L  +L +    
Sbjct: 734 YTEMRDM-VLDVVSHSFRPEFINRIDEVVVFHPLGRGHITSIAQIQLQRLYKRLEERGYS 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           + I+ AAL  +  +GFD +YGAR +   K+++  L+     ++P A  I  G LI   P 
Sbjct: 793 VTITNAALDMLGEVGFDPVYGARPL---KRAIQQLI-----ENPLAQQILGGKLIPGKPI 844

Query: 672 SLD 674
            LD
Sbjct: 845 ILD 847


>gi|33151758|ref|NP_873111.1| ATP-dependent Clp protease subunit B [Haemophilus ducreyi 35000HP]
 gi|54035812|sp|Q7VNH1.1|CLPB_HAEDU RecName: Full=Chaperone protein ClpB
 gi|33147979|gb|AAP95500.1| ATP-dependant Clp protease chain B [Haemophilus ducreyi 35000HP]
          Length = 856

 Score =  790 bits (2041), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/665 (56%), Positives = 520/665 (78%), Gaps = 20/665 (3%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 258 KAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 318 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++
Sbjct: 378 YISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEKDEASRQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+     +Y+ LE++WK EK+ +  +Q +K E+E  R+ +++A R  +++ +S
Sbjct: 438 RLAKLDEEMTAKAQEYSALEEVWKAEKSALLGTQHLKTELENARIAMDQAKRADNFEKMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L    Q  I+     N   LL+TKV  EEIAE++S+ TGIP++K+++
Sbjct: 498 ELQYGTIPALEKQL----QDAIKREEENNDHHLLRTKVTEEEIAEVLSKATGIPITKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L  RV+GQ+EA+ AV+NAI RSR+GL+D  +P GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEQVLHSRVIGQNEAVEAVANAILRSRAGLADPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L KTL+  +F++E +I+RIDMSEF+EKHS+SRL+GAPPGY+GYE+GGYLTE VRR+PYS+
Sbjct: 614 LSKTLANFLFDDENAIVRIDMSEFMEKHSVSRLVGAPPGYVGYEQGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLG+  I+E    + 
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGAHLIQE----NA 729

Query: 554 EIIKLA----VMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
           EI  LA    VM+ V  +FRPEFINRID+ +VF  L++++I +IANIQL  L  +L +  
Sbjct: 730 EITYLAMKEMVMSVVSQHFRPEFINRIDETVVFHPLDQQHIRAIANIQLQRLIRRLAERG 789

Query: 610 MDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKG 669
             + IS  AL  IS  GFD ++GAR +   K+++   L     ++P A  I  G L+   
Sbjct: 790 YQVTISDTALDHISQAGFDSLFGARPL---KRAIQQEL-----ENPLAQQILSGKLLPNN 841

Query: 670 PQSLD 674
           P  +D
Sbjct: 842 PVIID 846


>gi|308048519|ref|YP_003912085.1| ATP-dependent chaperone ClpB [Ferrimonas balearica DSM 9799]
 gi|307630709|gb|ADN75011.1| ATP-dependent chaperone ClpB [Ferrimonas balearica DSM 9799]
          Length = 857

 Score =  790 bits (2041), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/661 (57%), Positives = 510/661 (77%), Gaps = 21/661 (3%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKDKRVLSLDMGALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGRVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQY+EKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYVEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+S+R +PDKAIDLIDEAA+ I++EIDSKPE +DKLERR+IQLK+E +A+ +E DE+S K
Sbjct: 380 YLSERKLPDKAIDLIDEAASSIRLEIDSKPEPLDKLERRIIQLKLEEQALSKETDEASHK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L+K++++ LE ++  L++IW  EK  +  +Q IK  +E+ R  +  A R SD   +S
Sbjct: 440 RLELLKEQLSDLEQQFRELDEIWNTEKAALAGTQHIKAALEQARQDLEVARRASDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLLK +V   EIAE++++ TGIPV+K+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMTLLKNRVTDAEIAEVLAKATGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RVVGQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEEALHRRVVGQDEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++ ++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LSKALAHFMFDSADAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD+I++   E  
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDQIQQHFGELA 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E+ +L V   +   FRPEF+NR+D+ +VF  L ++ I  IA IQL  L+ +L +   +
Sbjct: 734 YPELKEL-VYGVLLQSFRPEFLNRVDETVVFHPLAQEQIAEIARIQLKGLEKRLAEKEYE 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKK--SPEANFIFLGDLINKG 669
           L+IS   L  ++  GFD ++GAR           L + I +K  +P A  I  G L+   
Sbjct: 793 LRISDEVLASLATAGFDPVFGARP----------LKRAIQQKLENPLAQQILAGKLLPGQ 842

Query: 670 P 670
           P
Sbjct: 843 P 843


>gi|403059616|ref|YP_006647833.1| endopeptidase Clp ATP-binding subunit ClpB [Pectobacterium
           carotovorum subsp. carotovorum PCC21]
 gi|402806942|gb|AFR04580.1| endopeptidase Clp ATP-binding chain B (ClpB) [Pectobacterium
           carotovorum subsp. carotovorum PCC21]
          Length = 858

 Score =  790 bits (2041), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/663 (57%), Positives = 520/663 (78%), Gaps = 17/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E DE+S+K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRIQIDSKPEPLDRLERRIIQLKLEQQALKKESDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L+  E+++ E +Y+  E+ WK EK  +  +Q IK  +E+ ++ + +A R+ D   +S
Sbjct: 440 RLELLSAELDQKEREYSQQEEEWKAEKASLTGTQNIKASLEQAKIALEQARRQGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q++           LL+ +V   EIA++++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATQQE------GKTMHLLRNRVTDVEIADVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L +RV+GQ+EA+ AV+N+IRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEKEKLLRMEDELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   E+ 
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERS 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E+  + V+  V   FRPEFINRID+++VF  L R +I SIA IQL  L  +L +    
Sbjct: 734 YTEMRDM-VLEVVSHSFRPEFINRIDEVVVFHPLGRAHITSIAQIQLQRLYKRLEERGYS 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           + I+ AAL  +  +GFD +YGAR +   K+++  L+     ++P A  +  G LI   P 
Sbjct: 793 VTITDAALDVLGEVGFDPVYGARPL---KRAIQQLI-----ENPLAQQMLGGKLIPGKPI 844

Query: 672 SLD 674
           +LD
Sbjct: 845 TLD 847


>gi|385870630|gb|AFI89150.1| ATP-dependent chaperone ClpB [Pectobacterium sp. SCC3193]
          Length = 858

 Score =  790 bits (2040), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/663 (57%), Positives = 521/663 (78%), Gaps = 17/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E DE+S+K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRIQIDSKPEPLDRLERRIIQLKLEQQALKKESDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L+  E+++ E +Y+  ++ WK EK  +  +Q +K  +E+ ++ + +A R+ D   +S
Sbjct: 440 RLELLSAELDQKEREYSQQDEEWKAEKASLTGTQNVKASLEQAKIALEQARRQGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q++           LL+ +V   EIA++++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATQQE------GKTVHLLRNRVTDAEIADVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L +RV+GQ+EA+ AV+N+IRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEKEKLLRMEDELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   E+ 
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERS 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E+  + V++ V   FRPEFINRID+++VF  L R +I SIA IQL  L  +L +    
Sbjct: 734 YTEMRDM-VLDVVSHSFRPEFINRIDEVVVFHPLGRGHITSIAQIQLQRLYKRLEERGYS 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           + I+ AAL  +  +GFD +YGAR +   K+++  L+     ++P A  I  G LI   P 
Sbjct: 793 VTITNAALDMLGEVGFDPVYGARPL---KRAIQQLI-----ENPLAQQILGGKLIPGKPI 844

Query: 672 SLD 674
            LD
Sbjct: 845 ILD 847


>gi|84393598|ref|ZP_00992351.1| ClpB protein [Vibrio splendidus 12B01]
 gi|84375807|gb|EAP92701.1| ClpB protein [Vibrio splendidus 12B01]
          Length = 857

 Score =  790 bits (2040), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 500/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGSLIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  + +II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+E+
Sbjct: 260 KSVLNELSKEEGNIILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEH 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK++V+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVIVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E DE+S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALTNENDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ E+++ E  +A LE++W  EK  +  +Q IK E+E+ R+ ++ A R  D   +S
Sbjct: 440 RLRTLQSELSEKERDFAELEEVWNAEKAALSGTQHIKSELEQARMDMDFARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIA+++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDAEIADVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  VSNAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLKMEGVLHKRVIGQAEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+++++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFMFDSDDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQENFNTLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM  V  +FRPEF+NR+D+ +VF  L + +I SIA IQL  LK ++     +L
Sbjct: 734 YQGIKNEVMEVVGKHFRPEFLNRVDESVVFHPLGQAHIESIAAIQLEHLKKRMEDNGYEL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   ALK IS +GFD +YGAR
Sbjct: 794 EVLDKALKLISQVGFDPVYGAR 815


>gi|392307907|ref|ZP_10270441.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Pseudoalteromonas citrea
           NCIMB 1889]
          Length = 857

 Score =  790 bits (2040), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/622 (60%), Positives = 495/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGKRVLSLDLGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELSKEEGQVILFIDEIHTMVGAGKTDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVSEPSVEDTIAILRGLKERYELHHSVDITDPAIVAAANLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLK+E  A+ +E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRLQIDSKPEQLDKLERRIIQLKLEDNALAKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R   ++  IN+LE +Y  L+++W  EK  ++ +Q IK E+E+ RL +  A R SD Q +S
Sbjct: 440 RRAEMQALINELEGEYRELDEVWNAEKASLQGTQVIKAELEQSRLDLEVARRASDLQRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L   SQ ++Q      +  LLK +VG +EIAEI+SR TGIPV+K++Q
Sbjct: 500 ELQYGRIPELERKLDLASQAEMQ------EMNLLKNQVGEDEIAEILSRWTGIPVAKMLQ 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L  +V+GQDEA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLAMEDELHNKVIGQDEAVHAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LTKALAHFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK-GD 552
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD ++E     D
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIVQEQASNND 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  +   FRPEFINRID+ +VF  L  ++I  IA+IQL+ L  +L +     
Sbjct: 734 YAGLKERVMGVLATQFRPEFINRIDETVVFHPLVTEHIKEIASIQLDKLTTRLHEKGFQF 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            ++  AL+KI+  GFD ++GAR
Sbjct: 794 GLTSDALEKIAQSGFDPVFGAR 815


>gi|442611509|ref|ZP_21026215.1| ClpB protein [Pseudoalteromonas luteoviolacea B = ATCC 29581]
 gi|441747437|emb|CCQ12277.1| ClpB protein [Pseudoalteromonas luteoviolacea B = ATCC 29581]
          Length = 857

 Score =  790 bits (2040), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RHYIEKDAALERRFQKVFVSEPSVEDTIAILRGLKERYELHHSVQITDPAIVAAAHLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I+++IDSKPE +DKLERR+IQLK+E  A+ +E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRLQIDSKPEPLDKLERRIIQLKLEDNALAKEKDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R   ++  I++LE +Y  L+++W  EK  ++ +Q IK E+E+ RL +  A R SD Q +S
Sbjct: 440 RRDEMQALISELEAEYKELDEVWNAEKASLQGTQAIKAELEQARLDMEVARRASDLQRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L   SQ ++Q      + +LL+ +V  +EIAEI+SR TGIPVSK++Q
Sbjct: 500 ELQYGRIPELERKLDLASQAEMQ------EMSLLRNQVSEDEIAEILSRWTGIPVSKMLQ 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L K+V+GQDEA+ AV+NAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEDELHKKVIGQDEAVVAVANAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L++ +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LTKALASFMFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGD 552
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E  +  D
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDIIQEQAQNND 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  VM  +   FRPEFINRID+ +VF  L  ++I  IA IQL  L+ +L +     
Sbjct: 734 YKTLKEKVMTVLTTQFRPEFINRIDETVVFHPLITEHIKHIAKIQLTRLEKRLTEKGFKF 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S  AL KI+  GFD ++GAR
Sbjct: 794 ELSDGALDKIAASGFDPVFGAR 815


>gi|345300451|ref|YP_004829809.1| ATP-dependent chaperone ClpB [Enterobacter asburiae LF7a]
 gi|345094388|gb|AEN66024.1| ATP-dependent chaperone ClpB [Enterobacter asburiae LF7a]
          Length = 857

 Score =  790 bits (2039), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/654 (58%), Positives = 514/654 (78%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLEAATQAE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQDLHHRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 734 YGHMKELVLGVVSHSFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            IS  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+LI
Sbjct: 794 HISDEALKLLSENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839


>gi|163750160|ref|ZP_02157403.1| clpB protein [Shewanella benthica KT99]
 gi|161330217|gb|EDQ01199.1| clpB protein [Shewanella benthica KT99]
          Length = 857

 Score =  790 bits (2039), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/662 (58%), Positives = 514/662 (77%), Gaps = 15/662 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  + +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGIKNKRVLSLDMGSLVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSQEEGQVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKD A ERRFQK+LVEEP++E+TI+ILRGL+ +YE+HH VEITDPAIVAA+ +S R
Sbjct: 320 RKYIEKDGALERRFQKVLVEEPNVEDTIAILRGLKDRYELHHHVEITDPAIVAAASMSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+I+IDSKPE++DKLERR IQLKIE +A+ +E DE+S +
Sbjct: 380 YISDRKLPDKAIDLIDEAASSIRIQIDSKPEVLDKLERRSIQLKIEEQALAKETDEASIR 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++KE+  ++ K A L +IW  EK  +  +Q IK ++E+ RL ++ A R SD   +S
Sbjct: 440 RLDSLRKELQDVDAKAAELNEIWHTEKAALAGTQHIKADLEQARLNLDVARRASDLTRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L   +Q ++Q        TLL+ KV   EIAE++SR TGIPV+K+++
Sbjct: 500 ELQYGRIPALEKQLDLAAQAEMQ------DMTLLRHKVTDVEIAEVLSRVTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L + V+GQ+EA+ AVSNAIRRSR+GL+D +RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLQMEKALHESVIGQNEAVDAVSNAIRRSRAGLADPERPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+ E +++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE +RRKPYS+
Sbjct: 614 LCKSLAKFLFDTEAAMVRIDMSEFMEKHSVARLLGAPPGYVGYEEGGYLTEAIRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I++      
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDIIQDRCGSLS 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VMN V   FRPEF+NRID+ +VF  L+ K+I  IA+IQ+ +L+ +L + + +L
Sbjct: 734 YSEMKAEVMNVVVHSFRPEFLNRIDETVVFHPLDEKHIEYIAHIQIKLLQQRLAEKDYEL 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
            ISK AL  I+  GFD  YGAR +   K++L     +   ++P A  I  G ++   P  
Sbjct: 794 IISKDALAFIAKAGFDPAYGARPL---KRAL-----QQEVENPLAQRILSGSIVPGKPIK 845

Query: 673 LD 674
           L+
Sbjct: 846 LE 847


>gi|375134056|ref|YP_004994706.1| ATP-dependent protease [Acinetobacter calcoaceticus PHEA-2]
 gi|325121501|gb|ADY81024.1| ATP-dependent protease [Acinetobacter calcoaceticus PHEA-2]
          Length = 859

 Score =  790 bits (2039), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/623 (59%), Positives = 505/623 (81%), Gaps = 8/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY  HHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D  SK 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDVGSKA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++K+I ++E +Y +LE+IWK EKTL++ ++Q + E++K R+   KA R+ D    +
Sbjct: 437 EVTHLEKQIAEVEKEYNDLEEIWKSEKTLVEGTKQAQVELDKARIAFEKAQREGDLAEAA 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ L+   Q ++   N   K  L++TKV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 RLQYGVIPELQKQLE---QDEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMMQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLLN+E  L  RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GEREKLLNMEEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-- 551
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS  ++E+ +G  
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGAT 731

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E ++  VMN V  +FRPEFINRID++++F  L +  I  IA+IQL+ L+++L+  +M 
Sbjct: 732 DDE-VRTIVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMS 790

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +   A   + + GFD +YGAR
Sbjct: 791 LTVDDTAFDLLIDAGFDPVYGAR 813


>gi|427426223|ref|ZP_18916287.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           WC-136]
 gi|425697009|gb|EKU66701.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           WC-136]
          Length = 859

 Score =  790 bits (2039), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/623 (59%), Positives = 505/623 (81%), Gaps = 8/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY  HHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D  SK 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDVGSKA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++K+I ++E +Y +LE+IWK EKTL++ ++Q + E++K R+   KA R+ D    +
Sbjct: 437 EVTHLEKQIAEVEKEYNDLEEIWKSEKTLVEGTKQAQVELDKARIAFEKAQREGDLAEAA 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ L+   Q ++   N   K  L++TKV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 RLQYGVIPELQKQLE---QDEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMMQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLLN+E  L  RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GEREKLLNMEEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-- 551
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS  ++E+ +G  
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGAT 731

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E ++  VMN V  +FRPEFINRID++++F  L +  I  IA+IQL+ L+++L+  +M 
Sbjct: 732 DDE-VRTIVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMS 790

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +   A   + + GFD +YGAR
Sbjct: 791 LTVDDTAFDLLIDAGFDPVYGAR 813


>gi|297182614|gb|ADI18773.1| hypothetical protein [uncultured gamma proteobacterium
           HF4000_36I10]
          Length = 870

 Score =  789 bits (2038), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/623 (61%), Positives = 513/623 (82%), Gaps = 4/623 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  LLAG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRLLSLDLGSLLAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KAVLNELSKEEGRVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQY+EKDAA ERRFQK+LV EP  E+TI+ILRGL+++YEVHHGV+ITD AI+AA+ LS R
Sbjct: 320 RQYLEKDAALERRFQKVLVGEPSEEDTIAILRGLKERYEVHHGVDITDSAIIAATRLSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDE+A++I++EIDSKPE MD+LERRLIQLKI+ EA+K++ DES++K
Sbjct: 380 YITDRQLPDKAIDLIDESASRIRMEIDSKPEEMDRLERRLIQLKIQREAVKKDEDESARK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           +L  +  +I+K+  +YA+LE+IW  EK  ++ + QIK E+EK +L++  A R SD   +S
Sbjct: 440 QLEKLNADIDKVGKEYADLEEIWLAEKASLQGANQIKSELEKAKLELESARRASDLTRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L    ++     N+A K  LL+ KV  EE+AE+VSR TGIPV+K+++
Sbjct: 500 ELQYGVIPELEKRLASAGEEANNPENDARK--LLRNKVTEEEVAEVVSRWTGIPVNKMLE 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L +RVVGQDEA+ AVS+A+RRSR+GLSD  RP GSF+F+GPTGVGKTE
Sbjct: 558 GEREKLLRMEDELHRRVVGQDEAVVAVSHAVRRSRAGLSDPNRPNGSFLFMGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  ++++EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL
Sbjct: 618 LCKALATFLYDSEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSL 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--G 551
           +LLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD+I+E+ +  G
Sbjct: 678 LLLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDRIQELARNEG 737

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             + IK AV+  V  +FRPEFINR+D+++VFR L +  + +IA+IQL  L  +L +  + 
Sbjct: 738 GYDAIKDAVLEVVSTHFRPEFINRLDEMVVFRPLEQDQVRAIADIQLAYLDKRLAERELK 797

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +S AA+ K++ +GFD ++GAR
Sbjct: 798 LSLSDAAMDKLTAVGFDPVFGAR 820


>gi|288550291|ref|ZP_06390995.1| ATP-dependent chaperone protein ClpB [Enterobacter cancerogenus
           ATCC 35316]
 gi|288315678|gb|EFC54616.1| ATP-dependent chaperone protein ClpB [Enterobacter cancerogenus
           ATCC 35316]
          Length = 861

 Score =  789 bits (2038), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/654 (57%), Positives = 514/654 (78%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 264 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 324 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+SKK
Sbjct: 384 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASKK 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+++ E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 444 RLDMLNEELDEKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+      Q +I   +      LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 504 ELQYGKIPELEK------QLEIATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 558 SEREKLLRMEQDLHHRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 618 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 738 YGHMKELVMGVVSHSFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEI 797

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            IS  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+LI
Sbjct: 798 HISDDALKLLSENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 843


>gi|393764456|ref|ZP_10353066.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Alishewanella agri BL06]
 gi|392604585|gb|EIW87486.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Alishewanella agri BL06]
          Length = 859

 Score =  789 bits (2038), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/654 (57%), Positives = 519/654 (79%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP  L  K++L LD+  LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNKEVPEGLKDKRVLSLDMGALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  II+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNEVAKEEGQIILFIDEIHTMVGAGKADGAMDAGNMLKPALARGELHCLGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHSVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E  A+ +E D++SKK
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRMQMDSKPEELDRLERRIIQLKLEDNALAKETDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R   I+++I++LE +Y  L+++W+ EK  ++ +Q IK E+E+ RL +  A R SD Q +S
Sbjct: 440 RRDTIREQIDELEQRYNELDEVWESEKAALQGTQNIKAELEQARLDLEVARRASDLQRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   SQ ++Q      + TLL+ KV  +EIA+++S+ TGIPV+K+++
Sbjct: 500 ELQYGRIPELEKKLDLASQAEMQ------EMTLLRHKVTDQEIADVLSKATGIPVNKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L  +VVGQ EA+SAV+NAIRRSR+GL+D  +P GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEDALHAKVVGQQEAVSAVANAIRRSRAGLADPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++ ++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LTKALAQFLFDSPDAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+N +I+MTSNLGSD I+E   +  
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNAVIIMTSNLGSDLIQEHYREFS 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  +M  +   FRPEF+NR+D+ +VF  L+ + I  IA+IQL  L+ +L + +  L
Sbjct: 734 YTEMKEMLMGVLSKQFRPEFLNRLDEAVVFHPLDDRQIKQIASIQLARLEQRLQQRDYQL 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            +S AAL+K++ +GFD +YGAR +   K+++     + H ++P A  +  G+++
Sbjct: 794 SVSDAALEKLAEVGFDPLYGARPL---KRAI-----QQHLENPLAQALLQGEIL 839


>gi|350552065|ref|ZP_08921273.1| ATP-dependent chaperone ClpB [Thiorhodospira sibirica ATCC 700588]
 gi|349795393|gb|EGZ49193.1| ATP-dependent chaperone ClpB [Thiorhodospira sibirica ATCC 700588]
          Length = 1221

 Score =  789 bits (2038), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/628 (61%), Positives = 503/628 (80%), Gaps = 12/628 (1%)

Query: 8    ENFYFTSNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRG 67
            E+ Y T N V+        TAIVEGLAQRIINGEVP  L  K++L LD+  L+AG K+RG
Sbjct: 557  EHLYITDNYVV-----THNTAIVEGLAQRIINGEVPEGLKEKRLLSLDMGALIAGAKFRG 611

Query: 68   EFEDRLKKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGA 127
            +FE+R+K ++ +++  +  +I+FIDE+HT++G GK EGS+DAGNMLKP L+RGELHCIGA
Sbjct: 612  DFEERMKAVINDLAKQEGRVILFIDEIHTVVGAGKAEGSMDAGNMLKPALARGELHCIGA 671

Query: 128  TTLNEYRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAA 187
            TTL+EYRQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGVEITDPA+VAA
Sbjct: 672  TTLDEYRQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEVHHGVEITDPALVAA 731

Query: 188  SELSYRYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREY 247
            + LS RYISDR +PDKAIDL+DEAAA+I++EIDSKPE+MD+LERRLIQLKIE EA+K+E 
Sbjct: 732  AVLSQRYISDRQLPDKAIDLMDEAAARIRMEIDSKPEMMDRLERRLIQLKIEREALKKES 791

Query: 248  DESSKKRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKS 307
            DE+SKKR   ++ EI +LE++Y  LE+IW  EK  +  +  IKEE+E+ RL+++ A R  
Sbjct: 792  DEASKKRFGALEAEIVRLELEYRELEEIWHAEKAALSGTASIKEELERARLELDTARRAG 851

Query: 308  DWQTVSKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIP 367
            D   +S+L+YG + +LER L   +Q ++      ++  LL+++V  EEIAE+VSR TGIP
Sbjct: 852  DLARMSELQYGRIPELERQLDMAAQAEM------HEMKLLRSRVSDEEIAEVVSRWTGIP 905

Query: 368  VSKIVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPT 427
            VSK+++ EREKLL +E+ L  RV+GQDEA+S VS+AIRRSR+GLSD  RP GSF+FLGPT
Sbjct: 906  VSKMLEGEREKLLRMESALSTRVIGQDEAVSVVSHAIRRSRAGLSDPNRPNGSFLFLGPT 965

Query: 428  GVGKTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVR 487
            GVGKTEL KTL+A +F+ EE+++R+DMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VR
Sbjct: 966  GVGKTELTKTLAAFLFDTEEAMVRVDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVR 1025

Query: 488  RKPYSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE 547
            RKPYS+ILLDEIEKA+ DVFNILLQ+LDDGRLTD  GRT++FRNT+IVMTSNLGS  I+E
Sbjct: 1026 RKPYSVILLDEIEKAHPDVFNILLQVLDDGRLTDGHGRTVDFRNTVIVMTSNLGSQLIQE 1085

Query: 548  MEKGDK-EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLL 606
            M   +  + +K AVM  V  +FRPEF+NRIDD++VF  L +  I +I +IQL  L+ +L 
Sbjct: 1086 MVGEEHYQAMKQAVMEVVATHFRPEFVNRIDDVVVFHPLGQAQIRAITDIQLGYLRARLK 1145

Query: 607  KMNMDLKISKAALKKISNIGFDLIYGAR 634
            + ++ L IS+AAL ++   GFD +YGAR
Sbjct: 1146 ERDLHLHISEAALDRLGEAGFDPVYGAR 1173


>gi|417879013|ref|ZP_12523600.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ABNIH3]
 gi|342230396|gb|EGT95235.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ABNIH3]
          Length = 859

 Score =  789 bits (2038), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/623 (59%), Positives = 506/623 (81%), Gaps = 8/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY  HHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D  SK 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++K+I ++E +Y +LE++WK EKTL++ ++Q + E++K R+   KA R+ D    +
Sbjct: 437 EVTHLEKQITEVEKEYNDLEEVWKAEKTLVEGTKQAQVELDKARIAFEKAQREGDLAEAA 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ L+   Q ++   N   K  L++TKV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 RLQYGVIPELQKQLE---QDEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMMQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E  L  RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GEREKLLHMEEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-- 551
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS  ++E+ +G  
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGAT 731

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E ++  VMN V  +FRPEFINRID++++F  L +  I  IA+IQL+ L+++L+  +M 
Sbjct: 732 DDE-VRTIVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMS 790

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +  +A   + + GFD +YGAR
Sbjct: 791 LTVDDSAFDLLIDAGFDPVYGAR 813


>gi|354596494|ref|ZP_09014511.1| ATP-dependent chaperone ClpB [Brenneria sp. EniD312]
 gi|353674429|gb|EHD20462.1| ATP-dependent chaperone ClpB [Brenneria sp. EniD312]
          Length = 857

 Score =  789 bits (2038), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/664 (57%), Positives = 522/664 (78%), Gaps = 17/664 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLA RI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLALRIVNGEVPEGLKNKRVLSLDMGSLVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLTDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+I+IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S+K
Sbjct: 380 YIADRKLPDKAIDLIDEAASSIRIQIDSKPEPLDRLDRRIIQLKLEQQALKKESDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L+  E+ + E +Y+ LE+ WK EK  +  +Q IK  +E+ ++ + +A R+ D   +S
Sbjct: 440 RLELLSSELEEKEREYSKLEEEWKAEKASLTGTQNIKAALEQAKISLEQARRQGDLGQMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ +V   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATQLE------GKTMHLLRNRVTDTEIAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQDEA+ AV+N+IRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEEALHQRVIGQDEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLASFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   E+ 
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERS 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E+  + V+  V   FRPEFINRID+++VF  L R++I SIA IQL  L  +L +    
Sbjct: 734 YAEMRGM-VLEVVSHSFRPEFINRIDEVVVFHPLGRQHIASIAKIQLQRLYKRLEERGYT 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           + I+ AAL+++  IGFD +YGAR +   K+++  L+     ++P A  I  G LI   P 
Sbjct: 793 VTITDAALERLGEIGFDPVYGARPL---KRAIQQLI-----ENPLAQQILSGKLIPGKPV 844

Query: 672 SLDT 675
           +LD 
Sbjct: 845 TLDA 848


>gi|365971689|ref|YP_004953250.1| chaperone protein ClpB [Enterobacter cloacae EcWSU1]
 gi|365750602|gb|AEW74829.1| Chaperone protein ClpB [Enterobacter cloacae EcWSU1]
          Length = 861

 Score =  789 bits (2037), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/654 (57%), Positives = 515/654 (78%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 264 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 324 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+SKK
Sbjct: 384 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASKK 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 444 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+      Q +I   +      LL+ KV  EEIAE+++R TGIPV+++++
Sbjct: 504 ELQYGKIPELEK------QLEIATQSEGKTMRLLRNKVTDEEIAEVLARWTGIPVARMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 558 SERDKLLRMEQDLHQRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 618 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 738 YGHMKDLVMGVVSHSFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEI 797

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            IS  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+LI
Sbjct: 798 HISDDALKLLSANGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 843


>gi|50122267|ref|YP_051434.1| protein disaggregation chaperone [Pectobacterium atrosepticum
           SCRI1043]
 gi|49612793|emb|CAG76243.1| ClpB protein (heat shock protein f84.1) [Pectobacterium
           atrosepticum SCRI1043]
          Length = 858

 Score =  789 bits (2037), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/655 (57%), Positives = 519/655 (79%), Gaps = 17/655 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E DE+S+K
Sbjct: 380 YISDRKLPDKAIDLIDEAASSIRIQIDSKPEPLDRLERRIIQLKLEQQALKKESDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L+  E+++ E +Y+  ++ WK EK  +  +Q IK  +E+ ++ + +A R+ D   +S
Sbjct: 440 RLELLSTELDQKEREYSRQDEEWKAEKASLTGTQNIKASLEQAKISLEQARRQGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q++           LL+ +V   EIA++++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATQQE------GKTVHLLRNRVTDVEIADVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L +RV+GQ+EA+ AV+N+IRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEDELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   E+ 
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERS 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E+  + V++ V   FRPEFINRID+++VF  L R +I SIA IQL  L  +L +    
Sbjct: 734 YTEMRDM-VLDVVSHSFRPEFINRIDEVVVFHPLGRAHITSIAQIQLQRLYKRLEERGYS 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
           + I+ AAL  +  +GFD +YGAR +   K+++  L+     ++P A  I  G+LI
Sbjct: 793 VTITDAALDMLGEVGFDPVYGARPL---KRAIQQLI-----ENPLAQQILGGELI 839


>gi|296104261|ref|YP_003614407.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|392980273|ref|YP_006478861.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
           dissolvens SDM]
 gi|295058720|gb|ADF63458.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|392326206|gb|AFM61159.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
           dissolvens SDM]
          Length = 857

 Score =  789 bits (2037), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 499/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+      Q +I   +      LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEK------QLEIATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 734 YSHMKDLVLGVVSHNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDDALKLLSENGYDPVYGAR 815


>gi|169796605|ref|YP_001714398.1| ATP-dependent protease [Acinetobacter baumannii AYE]
 gi|184157485|ref|YP_001845824.1| ATPase [Acinetobacter baumannii ACICU]
 gi|213156282|ref|YP_002318702.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii AB0057]
 gi|215484066|ref|YP_002326291.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii AB307-0294]
 gi|239503505|ref|ZP_04662815.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii AB900]
 gi|260557553|ref|ZP_05829768.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ATCC 19606 =
           CIP 70.34]
 gi|301346300|ref|ZP_07227041.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii AB056]
 gi|301510716|ref|ZP_07235953.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii AB058]
 gi|301597427|ref|ZP_07242435.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii AB059]
 gi|332853545|ref|ZP_08434809.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           6013150]
 gi|332868410|ref|ZP_08438141.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           6013113]
 gi|332872452|ref|ZP_08440423.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           6014059]
 gi|384131580|ref|YP_005514192.1| clpB [Acinetobacter baumannii 1656-2]
 gi|384142570|ref|YP_005525280.1| ATP-dependent protease [Acinetobacter baumannii MDR-ZJ06]
 gi|385236903|ref|YP_005798242.1| chaperone ATPase [Acinetobacter baumannii TCDC-AB0715]
 gi|387124549|ref|YP_006290431.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii MDR-TJ]
 gi|403675029|ref|ZP_10937230.1| clpB [Acinetobacter sp. NCTC 10304]
 gi|407932224|ref|YP_006847867.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii TYTH-1]
 gi|416148412|ref|ZP_11602323.1| ATPase with chaperone activity, ATP-binding subunit [Acinetobacter
           baumannii AB210]
 gi|417543969|ref|ZP_12195055.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC032]
 gi|417551549|ref|ZP_12202627.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Naval-18]
 gi|417552182|ref|ZP_12203252.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Naval-81]
 gi|417562555|ref|ZP_12213434.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC137]
 gi|417565785|ref|ZP_12216659.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC143]
 gi|417568293|ref|ZP_12219156.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC189]
 gi|417572053|ref|ZP_12222907.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Canada BC-5]
 gi|417579119|ref|ZP_12229952.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Naval-17]
 gi|417869415|ref|ZP_12514402.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ABNIH1]
 gi|417872866|ref|ZP_12517752.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ABNIH2]
 gi|417883709|ref|ZP_12527933.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ABNIH4]
 gi|421199178|ref|ZP_15656342.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC109]
 gi|421205359|ref|ZP_15662450.1| ATP-dependent protease [Acinetobacter baumannii AC12]
 gi|421455087|ref|ZP_15904434.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           IS-123]
 gi|421536750|ref|ZP_15982981.1| ATP-dependent protease [Acinetobacter baumannii AC30]
 gi|421621489|ref|ZP_16062408.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC074]
 gi|421625407|ref|ZP_16066259.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC098]
 gi|421628517|ref|ZP_16069287.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC180]
 gi|421632625|ref|ZP_16073273.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Naval-13]
 gi|421644563|ref|ZP_16085041.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           IS-235]
 gi|421646324|ref|ZP_16086776.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           IS-251]
 gi|421652335|ref|ZP_16092694.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC0162]
 gi|421654307|ref|ZP_16094637.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Naval-72]
 gi|421657285|ref|ZP_16097558.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Naval-83]
 gi|421661648|ref|ZP_16101821.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC110]
 gi|421665248|ref|ZP_16105370.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC087]
 gi|421672478|ref|ZP_16112434.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC099]
 gi|421674167|ref|ZP_16114102.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC065]
 gi|421679164|ref|ZP_16119043.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC111]
 gi|421686917|ref|ZP_16126654.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           IS-143]
 gi|421690662|ref|ZP_16130330.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           IS-116]
 gi|421696636|ref|ZP_16136218.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           WC-692]
 gi|421700351|ref|ZP_16139868.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           IS-58]
 gi|421703022|ref|ZP_16142490.1| clpB [Acinetobacter baumannii ZWS1122]
 gi|421706742|ref|ZP_16146146.1| clpB [Acinetobacter baumannii ZWS1219]
 gi|421790248|ref|ZP_16226474.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Naval-82]
 gi|421790785|ref|ZP_16226979.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Naval-2]
 gi|421798163|ref|ZP_16234191.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Naval-21]
 gi|421800821|ref|ZP_16236790.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Canada BC1]
 gi|421804761|ref|ZP_16240664.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           WC-A-694]
 gi|421806445|ref|ZP_16242309.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC035]
 gi|424052980|ref|ZP_17790512.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii Ab11111]
 gi|424060511|ref|ZP_17798002.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii Ab33333]
 gi|424064469|ref|ZP_17801954.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii Ab44444]
 gi|425747416|ref|ZP_18865424.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           WC-348]
 gi|425754539|ref|ZP_18872400.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Naval-113]
 gi|445408747|ref|ZP_21432647.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Naval-57]
 gi|445452387|ref|ZP_21444918.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           WC-A-92]
 gi|445459136|ref|ZP_21447476.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC047]
 gi|445467392|ref|ZP_21450716.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC338]
 gi|445476784|ref|ZP_21453971.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Naval-78]
 gi|445486448|ref|ZP_21457452.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           AA-014]
 gi|169149532|emb|CAM87421.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Acinetobacter baumannii AYE]
 gi|183209079|gb|ACC56477.1| ATPase with chaperone activity, ATP-binding subunit [Acinetobacter
           baumannii ACICU]
 gi|193076896|gb|ABO11616.2| ATP-dependent protease Hsp 100 [Acinetobacter baumannii ATCC 17978]
 gi|213055442|gb|ACJ40344.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii AB0057]
 gi|213987437|gb|ACJ57736.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii AB307-0294]
 gi|260409179|gb|EEX02482.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ATCC 19606 =
           CIP 70.34]
 gi|322507800|gb|ADX03254.1| clpB [Acinetobacter baumannii 1656-2]
 gi|323517400|gb|ADX91781.1| ATPase with chaperone activity, ATP-binding subunit [Acinetobacter
           baumannii TCDC-AB0715]
 gi|332728578|gb|EGJ59950.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           6013150]
 gi|332733409|gb|EGJ64592.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           6013113]
 gi|332739338|gb|EGJ70194.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           6014059]
 gi|333364933|gb|EGK46947.1| ATPase with chaperone activity, ATP-binding subunit [Acinetobacter
           baumannii AB210]
 gi|342230540|gb|EGT95373.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ABNIH1]
 gi|342232941|gb|EGT97704.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ABNIH2]
 gi|342235364|gb|EGT99968.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii ABNIH4]
 gi|347593063|gb|AEP05784.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Acinetobacter baumannii
           MDR-ZJ06]
 gi|385879041|gb|AFI96136.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii MDR-TJ]
 gi|395525137|gb|EJG13226.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC137]
 gi|395554588|gb|EJG20590.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC189]
 gi|395557541|gb|EJG23542.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC143]
 gi|395565145|gb|EJG26793.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC109]
 gi|395568257|gb|EJG28931.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Naval-17]
 gi|398325140|gb|EJN41327.1| ATP-dependent protease [Acinetobacter baumannii AC12]
 gi|400207621|gb|EJO38591.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Canada BC-5]
 gi|400212877|gb|EJO43836.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           IS-123]
 gi|400381857|gb|EJP40535.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC032]
 gi|400386004|gb|EJP49079.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Naval-18]
 gi|400392441|gb|EJP59487.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Naval-81]
 gi|404561397|gb|EKA66632.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           WC-692]
 gi|404564040|gb|EKA69232.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           IS-116]
 gi|404566527|gb|EKA71670.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           IS-143]
 gi|404570733|gb|EKA75806.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           IS-58]
 gi|404668463|gb|EKB36372.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii Ab33333]
 gi|404671058|gb|EKB38927.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii Ab11111]
 gi|404673205|gb|EKB41004.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii Ab44444]
 gi|407193008|gb|EKE64180.1| clpB [Acinetobacter baumannii ZWS1122]
 gi|407193360|gb|EKE64526.1| clpB [Acinetobacter baumannii ZWS1219]
 gi|407900805|gb|AFU37636.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii TYTH-1]
 gi|408504704|gb|EKK06439.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           IS-235]
 gi|408505461|gb|EKK07182.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC0162]
 gi|408511074|gb|EKK12728.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Naval-72]
 gi|408517711|gb|EKK19249.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           IS-251]
 gi|408697909|gb|EKL43411.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC074]
 gi|408698708|gb|EKL44196.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC098]
 gi|408706349|gb|EKL51671.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC180]
 gi|408708733|gb|EKL54003.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Naval-13]
 gi|408713861|gb|EKL59017.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Naval-83]
 gi|408715654|gb|EKL60779.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC110]
 gi|409985317|gb|EKO41539.1| ATP-dependent protease [Acinetobacter baumannii AC30]
 gi|410379109|gb|EKP31716.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC099]
 gi|410384928|gb|EKP37426.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC065]
 gi|410390712|gb|EKP43094.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC087]
 gi|410391656|gb|EKP44023.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC111]
 gi|410395066|gb|EKP47381.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Naval-21]
 gi|410395333|gb|EKP47639.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Naval-82]
 gi|410404813|gb|EKP56871.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Naval-2]
 gi|410406692|gb|EKP58695.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Canada BC1]
 gi|410410778|gb|EKP62670.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           WC-A-694]
 gi|410417789|gb|EKP69557.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC035]
 gi|425493990|gb|EKU60212.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           WC-348]
 gi|425496768|gb|EKU62885.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Naval-113]
 gi|444754396|gb|ELW79013.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           WC-A-92]
 gi|444769521|gb|ELW93699.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           AA-014]
 gi|444774489|gb|ELW98571.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC047]
 gi|444776558|gb|ELX00599.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC338]
 gi|444777310|gb|ELX01341.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Naval-78]
 gi|444780683|gb|ELX04619.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           Naval-57]
 gi|452951611|gb|EME57057.1| ATP-dependent chaperone ClpB [Acinetobacter baumannii MSP4-16]
          Length = 859

 Score =  789 bits (2037), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/623 (59%), Positives = 506/623 (81%), Gaps = 8/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY  HHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D  SK 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++K+I ++E +Y +LE++WK EKTL++ ++Q + E++K R+   KA R+ D    +
Sbjct: 437 EVTHLEKQIAEVEKEYNDLEEVWKAEKTLVEGTKQAQVELDKARIAFEKAQREGDLAEAA 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ L+   Q ++   N   K  L++TKV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 RLQYGVIPELQKQLE---QDEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMMQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E  L  RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GEREKLLHMEEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-- 551
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS  ++E+ +G  
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGAT 731

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E ++  VMN V  +FRPEFINRID++++F  L +  I  IA+IQL+ L+++L+  +M 
Sbjct: 732 DDE-VRTIVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMS 790

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +  +A   + + GFD +YGAR
Sbjct: 791 LTVDDSAFDLLIDAGFDPVYGAR 813


>gi|424741779|ref|ZP_18170120.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           WC-141]
 gi|422944552|gb|EKU39543.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           WC-141]
          Length = 859

 Score =  789 bits (2037), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/623 (59%), Positives = 505/623 (81%), Gaps = 8/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L SK++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKSKRVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY  HHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D  SK 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDVGSKA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++K+I ++E +Y +LE+IWK EKTL++ ++Q + E++K R+   KA R+ D    +
Sbjct: 437 EVTHLEKQIAEVEKEYNDLEEIWKSEKTLVEGTKQAQVELDKARIAFEKAQREGDLAEAA 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ L+   Q ++   N   K  L++TKV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 RLQYGVIPELQKQLE---QDEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMLQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLLN+E  L  RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GEREKLLNMEGFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-- 551
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS  ++E+ +G  
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGAT 731

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E ++  VM+ V  +FRPEFINRID++++F  L +  I  IA+IQL+ L+++L+  +M 
Sbjct: 732 DDE-VRAIVMSAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMS 790

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +   A   + + GFD +YGAR
Sbjct: 791 LNVDDTAFDLLIDAGFDPVYGAR 813


>gi|422022041|ref|ZP_16368550.1| protein disaggregation chaperone [Providencia sneebia DSM 19967]
 gi|414097791|gb|EKT59444.1| protein disaggregation chaperone [Providencia sneebia DSM 19967]
          Length = 857

 Score =  789 bits (2037), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 381/662 (57%), Positives = 517/662 (78%), Gaps = 15/662 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKK
Sbjct: 380 YISDRMLPDKAIDLIDEAGASLRMQMDSKPEALDRLERRIIQLKLEQQALKKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ E+ + E +YA+LE+ WK EK  +  +Q IK E+E  R ++ KA R  D   +S
Sbjct: 440 RLEMLEDELAEKEREYASLEEEWKAEKASLTGTQHIKTELEHARYEMEKARRGGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L+  ++ +           LL+ KV   EIAEI++R TGIPVS++++
Sbjct: 500 ELQYGRIPELEKQLESATKAE------GKNMKLLRNKVTDSEIAEILARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L KRV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEHQLHKRVIGQNEAVVAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++++++IRIDMSEF+EKH+++RL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMIRIDMSEFMEKHAVARLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           IL DEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E   +  
Sbjct: 674 ILFDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQESFGRIS 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  +   FRPEFINRID+++VF  L++ NI +IANIQL+ L  +L +   ++
Sbjct: 734 YPEMKDMVMEVLTRSFRPEFINRIDEVVVFHPLDKANIANIANIQLSRLYKRLEEHGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
             + AAL+KI   G+D I+GAR +   K+++   +     ++P A  I  G LI   P  
Sbjct: 794 SATPAALEKIGEAGYDPIFGARPL---KRAIQQEI-----ENPLAQEILSGKLIPGKPVV 845

Query: 673 LD 674
           LD
Sbjct: 846 LD 847


>gi|126641234|ref|YP_001084218.1| ATP-dependent protease Hsp 100 [Acinetobacter baumannii ATCC 17978]
          Length = 838

 Score =  788 bits (2036), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/623 (59%), Positives = 506/623 (81%), Gaps = 8/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 176 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAGAKYRGEFEERL 235

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 236 KAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEY 295

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY  HHGV+I D AI+AA+++S+R
Sbjct: 296 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHR 355

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D  SK 
Sbjct: 356 YITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKA 415

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++K+I ++E +Y +LE++WK EKTL++ ++Q + E++K R+   KA R+ D    +
Sbjct: 416 EVTHLEKQIAEVEKEYNDLEEVWKAEKTLVEGTKQAQVELDKARIAFEKAQREGDLAEAA 475

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ L+   Q ++   N   K  L++TKV   EIAE+VS  TGIPV+K++Q
Sbjct: 476 RLQYGVIPELQKQLE---QDEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMMQ 530

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E  L  RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 531 GEREKLLHMEEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 590

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 591 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 650

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-- 551
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS  ++E+ +G  
Sbjct: 651 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGAT 710

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E ++  VMN V  +FRPEFINRID++++F  L +  I  IA+IQL+ L+++L+  +M 
Sbjct: 711 DDE-VRTIVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMS 769

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +  +A   + + GFD +YGAR
Sbjct: 770 LTVDDSAFDLLIDAGFDPVYGAR 792


>gi|293608681|ref|ZP_06690984.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829254|gb|EFF87616.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 838

 Score =  788 bits (2036), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/623 (59%), Positives = 505/623 (81%), Gaps = 8/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 176 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAGAKYRGEFEERL 235

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 236 KAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEY 295

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY  HHGV+I D AI+AA+++S+R
Sbjct: 296 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHR 355

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D  SK 
Sbjct: 356 YITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDVGSKA 415

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++K+I ++E +Y +LE+IWK EKTL++ ++Q + E++K R+   KA R+ D    +
Sbjct: 416 EVTHLEKQIAEVEKEYNDLEEIWKSEKTLVEGTKQAQVELDKARIAFEKAQREGDLAEAA 475

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ L+   Q ++   N   K  L++TKV   EIAE+VS  TGIPV+K++Q
Sbjct: 476 RLQYGVIPELQKQLE---QDEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMMQ 530

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLLN+E  L  RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 531 GEREKLLNMEEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 590

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 591 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 650

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-- 551
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS  ++E+ +G  
Sbjct: 651 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGAT 710

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E ++  VMN V  +FRPEFINRID++++F  L +  I  IA+IQL+ L+++L+  +M 
Sbjct: 711 DDE-VRTIVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMS 769

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +   A   + + GFD +YGAR
Sbjct: 770 LTVDDTAFDLLIDAGFDPVYGAR 792


>gi|260549974|ref|ZP_05824189.1| ATPase with chaperone activity [Acinetobacter sp. RUH2624]
 gi|424056249|ref|ZP_17793770.1| ATP-dependent chaperone ClpB [Acinetobacter nosocomialis Ab22222]
 gi|425741319|ref|ZP_18859469.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           WC-487]
 gi|445434253|ref|ZP_21439946.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC021]
 gi|260406966|gb|EEX00444.1| ATPase with chaperone activity [Acinetobacter sp. RUH2624]
 gi|407441289|gb|EKF47795.1| ATP-dependent chaperone ClpB [Acinetobacter nosocomialis Ab22222]
 gi|425492625|gb|EKU58879.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           WC-487]
 gi|444756658|gb|ELW81198.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           OIFC021]
          Length = 859

 Score =  788 bits (2036), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/623 (59%), Positives = 506/623 (81%), Gaps = 8/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY  HHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D  SK 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++K+I +++ +Y +LE++WK EKTL++ ++Q + E++K R+   KA R+ D    +
Sbjct: 437 EVTHLEKQIAEVQKEYNDLEEVWKSEKTLVEGTKQAQVELDKARIAFEKAQREGDLAEAA 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ L+   Q ++   N   K  L++TKV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 RLQYGVIPELQKQLE---QDEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMMQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E  L  RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GEREKLLHMEEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-- 551
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS  ++E+ +G  
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGAT 731

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E ++  VMN V  +FRPEFINRID++++F  L +  I  IA+IQL+ L+++L+  +M 
Sbjct: 732 DDE-VRTVVMNAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLVDRDMS 790

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +  +A   + + GFD +YGAR
Sbjct: 791 LTVDDSAFDLLIDAGFDPVYGAR 813


>gi|113460345|ref|YP_718406.1| ATP-dependent Clp protease subunit B [Haemophilus somnus 129PT]
 gi|112822388|gb|ABI24477.1| ATP-dependent Clp protease, subunit B [Haemophilus somnus 129PT]
          Length = 856

 Score =  788 bits (2035), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/621 (60%), Positives = 503/621 (80%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLKELAQEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKP+ +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L+++E+ + E +YA LE +WK EK  +  +Q IK E++  ++++ +A R SD+  +S
Sbjct: 440 RLDLLEEELGEKEREYAELEDVWKAEKAALSGAQHIKAELDNAKIQMEQARRISDFAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L +    +        + TLL+ +V  EEIAE++SR TGIPV+K+++
Sbjct: 500 ELQYGRIPELEKQLAQAESAE------GKEMTLLRNRVTDEEIAEVLSRATGIPVAKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +E  L KRVVGQ EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKDKLLRMEQELHKRVVGQSEAVVAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFMFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  ++ D 
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKELDY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA IQL  L  ++      L+
Sbjct: 734 NAMKEIVMSVVGQHFRPEFINRIDETVVFHPLAKENIRAIATIQLQRLVKRMETHGYQLE 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D+IYGAR
Sbjct: 794 FTDATLDFIGEVGYDVIYGAR 814


>gi|170718829|ref|YP_001783422.1| ATPase [Haemophilus somnus 2336]
 gi|168826958|gb|ACA32329.1| ATPase AAA-2 domain protein [Haemophilus somnus 2336]
          Length = 856

 Score =  788 bits (2035), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/621 (60%), Positives = 503/621 (80%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLKELAQEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKP+ +D+LERR+IQLK+E +A+++E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDRLERRIIQLKLEQQALQKEDDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L+++E+ + E +YA LE +WK EK  +  +Q IK E++  ++++ +A R SD+  +S
Sbjct: 440 RLDLLEEELGEKEREYAELEDVWKAEKAALSGAQHIKAELDNAKIQMEQARRISDFAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L +    +        + TLL+ +V  EEIAE++SR TGIPV+K+++
Sbjct: 500 ELQYGRIPELEKQLAQAESAE------GKEMTLLRNRVTDEEIAEVLSRATGIPVAKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +E  L KRVVGQ EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKDKLLRMEQELHKRVVGQSEAVVAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E +++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFMFDDENAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  ++ D 
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQGNKELDY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA IQL  L  ++      L+
Sbjct: 734 NAMKEVVMSVVGQHFRPEFINRIDETVVFHPLAKENIRAIATIQLQRLVKRMETHGYQLE 793

Query: 614 ISKAALKKISNIGFDLIYGAR 634
            + A L  I  +G+D+IYGAR
Sbjct: 794 FTDATLDFIGEVGYDVIYGAR 814


>gi|56460289|ref|YP_155570.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
           [Idiomarina loihiensis L2TR]
 gi|56179299|gb|AAV82021.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
           [Idiomarina loihiensis L2TR]
          Length = 857

 Score =  788 bits (2035), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 493/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIG+PGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  LLAG K+RGEFE+RL
Sbjct: 200 NNPVLIGDPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDLGALLAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLTELSKEEGRIILFIDEMHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP++E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPNVEDTIAILRGLKERYELHHSVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+++E D++SKK
Sbjct: 380 YISDRKLPDKAIDLIDEAASSIRMQIDSKPEDLDRLERRIIQLKLERQALQKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+++ E KY  LE++W  EK  ++ +Q IK ++E+ R  ++ A R  D   +S
Sbjct: 440 RLEILHDELDEQERKYEELEEVWNTEKAAVQGTQHIKAQLEQARTDMDIARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER      Q D+ L       +LLK +V  EEIA+++SR TGIPV+++++
Sbjct: 500 ELQYGRIPELER------QLDLALQAEMQDMSLLKNRVTEEEIADVLSRWTGIPVNRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E  +  RVVGQ+EA+ AVSNAIRRSR+GL D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLHMEEQIHSRVVGQNEAVEAVSNAIRRSRAGLGDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ + +++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LSKALANFMFDTDHAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E  K   
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDLIQEHAKEHT 733

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E +K  VM  +  +FRPEFINR+D+ +VF  L    I SIA  QL +L  +L   +  L
Sbjct: 734 YEQMKAEVMEVLAHHFRPEFINRVDETVVFHPLGESEIRSIAQFQLQLLYKRLEDKDYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++   AL  ++  GFD ++GAR
Sbjct: 794 ELDDKALSHLARTGFDPVFGAR 815


>gi|389839942|ref|YP_006342026.1| protein disaggregation chaperone ClpB [Cronobacter sakazakii ES15]
 gi|387850418|gb|AFJ98515.1| protein disaggregation chaperone ClpB [Cronobacter sakazakii ES15]
          Length = 857

 Score =  788 bits (2035), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 495/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNDELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE++L   +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKLLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V   FRPEFINRID+++VF  L +K+I SIA IQL  L  +L      +
Sbjct: 734 YASMKELVMGVVGQSFRPEFINRIDEVVVFHPLGQKHIASIAQIQLQRLYQRLEDRGYAV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  AL+ +   G+D +YGAR
Sbjct: 794 HISDDALQLLGENGYDPVYGAR 815


>gi|209694256|ref|YP_002262184.1| chaperone ClpB (heat-shock protein) [Aliivibrio salmonicida
           LFI1238]
 gi|208008207|emb|CAQ78351.1| chaperone ClpB (heat-shock protein) [Aliivibrio salmonicida
           LFI1238]
          Length = 861

 Score =  788 bits (2035), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/625 (60%), Positives = 503/625 (80%), Gaps = 13/625 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IG+PGVGKTAIVEGLAQRIINGEVP  L  K++L LDI  L+AG K+RGEFE+RL
Sbjct: 200 NNPVIIGQPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLSLDIGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + +II+FIDE+HTM+G GK EGS+DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 260 KAVLNELAKEEGNIILFIDEVHTMVGAGKGEGSMDAGNMLKPALARGDLHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKD A ERRFQK++V+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RKYIEKDPALERRFQKVIVDEPTVEDTIAILRGLKERYEIHHHVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +DKLER++IQLKIE +A+ +E D++S K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPESLDKLERKIIQLKIEQQALVKESDDASLK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +  E+ + E  Y+ LE+IWK EK  +  +Q IK E++  R  ++ A R  D   +S
Sbjct: 440 RLDSLNLELREKERDYSELEEIWKAEKAALSGTQHIKTELDIARSNMDIARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + +LLK KV   EIAE++SR TGIPV+K+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMSLLKNKVTDAEIAEVLSRQTGIPVNKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L  RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLKMEAMLHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKSLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK----EME 549
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGS+KI+    E++
Sbjct: 674 LLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSEKIQQHFGELD 733

Query: 550 KGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
            G    IK  VM+ V  +FRPEF+NR+D+ +VF  L ++NI SIA IQL  L+ +L + +
Sbjct: 734 YGG---IKELVMDVVGQHFRPEFLNRVDEAVVFHPLGQENIKSIAKIQLQRLEKRLNEKD 790

Query: 610 MDLKISKAALKKISNIGFDLIYGAR 634
             LK+S  AL  IS  GFD +YGAR
Sbjct: 791 YQLKVSNEALTLISEAGFDPVYGAR 815


>gi|429087804|ref|ZP_19150536.1| ClpB protein [Cronobacter universalis NCTC 9529]
 gi|426507607|emb|CCK15648.1| ClpB protein [Cronobacter universalis NCTC 9529]
          Length = 857

 Score =  788 bits (2035), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 495/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNDELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V   FRPEFINRID+++VF  L +++I SIA IQL  L  +L      +
Sbjct: 734 YASMKELVMGVVGQSFRPEFINRIDEVVVFHPLGQQHIASIAQIQLQRLYQRLEDRGYAV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  AL+ +   G+D +YGAR
Sbjct: 794 HISDDALQLLGENGYDPVYGAR 815


>gi|169633163|ref|YP_001706899.1| ATP-dependent protease [Acinetobacter baumannii SDF]
 gi|169151955|emb|CAP00815.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Acinetobacter baumannii]
          Length = 859

 Score =  788 bits (2034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/623 (59%), Positives = 506/623 (81%), Gaps = 8/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY  HHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D  SK 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++K+I ++E +Y +LE++WK EKTL++ ++Q + E++K R+   KA R+ D    +
Sbjct: 437 EVTHLEKQIAEVEKEYNDLEEVWKAEKTLVEGTKQAQVELDKARIAFEKAQREGDLAEAA 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ L+   Q ++   N   K  L++TKV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 RLQYGVIPELQKQLE---QDEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMMQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E  L  RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GEREKLLHMEEFLHDRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-- 551
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS  ++E+ +G  
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGAT 731

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E ++  VMN V  +FRPEFINRID++++F  L +  I  IA+IQL+ L+++L+  +M 
Sbjct: 732 DDE-VRTIVMNAVSQHFRPEFINRIDELVIFHSLKKVQIRGIADIQLDRLRSRLVDRDMS 790

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +  +A   + + GFD +YGAR
Sbjct: 791 LTVDDSAFDLLIDAGFDPVYGAR 813


>gi|377579335|ref|ZP_09808305.1| chaperone protein ClpB [Escherichia hermannii NBRC 105704]
 gi|377539445|dbj|GAB53470.1| chaperone protein ClpB [Escherichia hermannii NBRC 105704]
          Length = 857

 Score =  788 bits (2034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/654 (57%), Positives = 512/654 (78%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLSDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALLKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGDLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L +K+I SIA IQL  L  +L +    +
Sbjct: 734 YSHMKDMVLTVVSQNFRPEFINRIDEVVVFHPLGQKHIASIAQIQLQRLYKRLEERGYQV 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
           ++S  AL+ +   G+D +YGAR +   K+++   +     ++P A  I  G+LI
Sbjct: 794 QMSDEALRLLGENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839


>gi|283786204|ref|YP_003366069.1| chaperone (heat-shock protein F84.1) [Citrobacter rodentium ICC168]
 gi|282949658|emb|CBG89277.1| chaperone (heat-shock protein F84.1) [Citrobacter rodentium ICC168]
          Length = 857

 Score =  788 bits (2034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/654 (57%), Positives = 513/654 (78%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+N  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELNDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YSHMKEMVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAKIQLQRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            IS  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+LI
Sbjct: 794 HISDEALKLLSANGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839


>gi|401677935|ref|ZP_10809906.1| protein disaggregation chaperone [Enterobacter sp. SST3]
 gi|400214706|gb|EJO45621.1| protein disaggregation chaperone [Enterobacter sp. SST3]
          Length = 857

 Score =  788 bits (2034), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 500/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLEIATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +EN L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMENDLHNRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 734 YSHMKDLVLGVVSHNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDDALKLLSKNGYDPVYGAR 815


>gi|78484759|ref|YP_390684.1| ATPase AAA [Thiomicrospira crunogena XCL-2]
 gi|78363045|gb|ABB41010.1| ATPase family associated with various cellular activities
           [Thiomicrospira crunogena XCL-2]
          Length = 854

 Score =  787 bits (2033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/622 (61%), Positives = 508/622 (81%), Gaps = 4/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+A LLAG KYRGEFE+RL
Sbjct: 195 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRLLSLDLAGLLAGAKYRGEFEERL 254

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK++   +  +I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 255 KALLKDLEKQEGSVILFIDEIHTMVGAGKTEGSMDAGNMLKPALARGELHCIGATTLDEY 314

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+ IEKDAA ERRFQK++V+EP  E+TI+ILRGL+++YEVHHGV ITDPAI+AA+ LS R
Sbjct: 315 RENIEKDAALERRFQKVIVDEPSEEDTIAILRGLKERYEVHHGVAITDPAIIAAAHLSQR 374

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE MD+L+RRLIQLKIE EA+K+E DE+SKK
Sbjct: 375 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEEMDRLDRRLIQLKIEREALKKEKDEASKK 434

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++++ I+++E +YA+LE+IWK +K  ++ ++Q KEE++K R+++  A R+ +   +S
Sbjct: 435 RLGVLQESIDEMEKEYADLEEIWKKDKAALQGAKQYKEELDKARIEMEAAHREGNLGKMS 494

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE  +K   + + +      +  LL+ KV  EEIAE+V+R TGIP+S++++
Sbjct: 495 ELQYGVIPDLEAKIKAAEEAEGEED---GQMHLLRNKVTEEEIAEVVARWTGIPISRMLE 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  +  +V+GQ EA+SAVS+AIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GERDKLLRMEEAIGAKVIGQSEAVSAVSDAIRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ +++I+R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+
Sbjct: 612 LTKALADFLFDTQDAIVRLDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS  I+E   +  
Sbjct: 672 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSQIIQEKTGQAT 731

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E +K  VM+ V  +FRPEFINRIDDI+VF  L++  I SIA+IQLN L+ +L    + L
Sbjct: 732 YEEMKRDVMDVVGSHFRPEFINRIDDIVVFHPLDKAQIRSIADIQLNHLRQRLADNELSL 791

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S A L KI+  GFD +YGAR
Sbjct: 792 ELSDAVLDKIAEAGFDPVYGAR 813


>gi|242240264|ref|YP_002988445.1| protein disaggregation chaperone [Dickeya dadantii Ech703]
 gi|242132321|gb|ACS86623.1| ATP-dependent chaperone ClpB [Dickeya dadantii Ech703]
          Length = 857

 Score =  787 bits (2033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/663 (56%), Positives = 519/663 (78%), Gaps = 17/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAQPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E D++S K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEPLDRLDRRIIQLKLEQQALKKESDDASLK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E +Y+ LE+ WK EK  +  +Q IK  +E+ +L + +A R+ D   +S
Sbjct: 440 RLEILNAELEQKEREYSKLEEEWKAEKASLTGTQNIKAALEQAKLALEQARRQGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ +V   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKELAAANQVE------GKTMHLLRNRVTDAEIAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  + +RV+GQ+EA+ AV+N+IRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEQEMHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+A +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLAAFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++   GD 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQD-RFGDM 732

Query: 554 EIIKL--AVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
              ++   V+N V  +FRPEFINRID+++VF  L R +I SIA IQL  L  +L +    
Sbjct: 733 NYGQMRDMVLNVVSHHFRPEFINRIDEVVVFHPLARNHIASIAQIQLQRLYKRLEERGYS 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           + IS AAL+ +   GFD +YGAR +   K+++  ++     ++P A  I  G+L+   P 
Sbjct: 793 VSISDAALELLGKSGFDPVYGARPL---KRAIQQMI-----ENPLAQRILSGELLPGKPI 844

Query: 672 SLD 674
            LD
Sbjct: 845 VLD 847


>gi|197284295|ref|YP_002150167.1| protein disaggregation chaperone [Proteus mirabilis HI4320]
 gi|227357800|ref|ZP_03842148.1| chaperone ClpB [Proteus mirabilis ATCC 29906]
 gi|425067193|ref|ZP_18470309.1| chaperone ClpB [Proteus mirabilis WGLW6]
 gi|425073294|ref|ZP_18476400.1| chaperone ClpB [Proteus mirabilis WGLW4]
 gi|194681782|emb|CAR41000.1| chaperone ClpB (heat-shock protein F84.1) [Proteus mirabilis
           HI4320]
 gi|227161910|gb|EEI46928.1| chaperone ClpB [Proteus mirabilis ATCC 29906]
 gi|404595272|gb|EKA95817.1| chaperone ClpB [Proteus mirabilis WGLW4]
 gi|404601488|gb|EKB01897.1| chaperone ClpB [Proteus mirabilis WGLW6]
          Length = 858

 Score =  787 bits (2033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/622 (60%), Positives = 504/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGSLLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDLSKQEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA A +++++DSKPE +D+L+RR+IQLK+E +A+++E D++SKK
Sbjct: 380 YISDRMLPDKAIDLIDEAGASLRMQMDSKPEALDRLDRRIIQLKLEQQALQKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+ + E +Y++LE+ WK EK  +  +Q IK E+E+ R+ + +A R  D   +S
Sbjct: 440 RLAMLNEELAEKEKEYSSLEEEWKAEKAELTGTQHIKAELEQARIALEQARRSGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG++  LE+ L E ++ + +         LL+ KV   EIAEI++R TGIPVS++++
Sbjct: 500 EIQYGQIPTLEKQLAEANKTEDK------HMKLLRNKVTDAEIAEILARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQDEA++AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHRRVIGQDEAVNAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALADFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGTLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM+ V  +FRPEFINRID+++VF  L ++NI +IA IQL  L  +L +    +
Sbjct: 734 YPAMKTIVMDVVGHHFRPEFINRIDEVVVFHPLGKENIAAIAQIQLRRLYQRLEERGYHV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            I+ AAL+K+  +GFD IYGAR
Sbjct: 794 TITGAALEKLGEVGFDPIYGAR 815


>gi|378446075|ref|YP_005233707.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|261247854|emb|CBG25683.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
          Length = 857

 Score =  787 bits (2033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSANGYDPVYGAR 815


>gi|365139798|ref|ZP_09346062.1| chaperone ClpB [Klebsiella sp. 4_1_44FAA]
 gi|363654021|gb|EHL92952.1| chaperone ClpB [Klebsiella sp. 4_1_44FAA]
          Length = 857

 Score =  787 bits (2033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLTDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+   E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATQAE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEQELHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 734 YGHMKDLVLGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S  ALK +S  G+D +YGAR
Sbjct: 794 QMSDEALKLLSANGYDPVYGAR 815


>gi|411011697|ref|ZP_11388026.1| ATP-dependent chaperone protein ClpB [Aeromonas aquariorum AAK1]
          Length = 857

 Score =  787 bits (2033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/622 (59%), Positives = 503/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIG PGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGAPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDLAKEEGNVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+R
Sbjct: 320 RQFIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+K
Sbjct: 380 YIADRQLPDKAIDLIDEAAASIRLQIDSKPESLDRLERRIIQLKLEQQALMKEDDDASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI + + +Y  LE++WK EK  +  +Q IK  +E+ R  ++ A R  D   +S
Sbjct: 440 RLELINQEIGEKDREYNELEEVWKAEKAALAGTQHIKAALEQARQDLDVARRAGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + +LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEDQLHSRVIGQEEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ +++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALAEFLFDTQDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHHSEKD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  +M  +   FRPEFINRID+ +VF  L  ++I SIA IQL  L ++L     ++
Sbjct: 734 YDEMKAMLMEVLARSFRPEFINRIDETVVFHPLGEEHIKSIARIQLKSLMSRLEAQGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S+A L K+ + GFD +YGAR
Sbjct: 794 EVSEALLNKLVHAGFDPVYGAR 815


>gi|332289023|ref|YP_004419875.1| protein disaggregation chaperone [Gallibacterium anatis UMN179]
 gi|330431919|gb|AEC16978.1| protein disaggregation chaperone [Gallibacterium anatis UMN179]
          Length = 857

 Score =  787 bits (2033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/623 (60%), Positives = 504/623 (80%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLRHKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L EI+  +  II+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNEIAKEEGRIILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKP+ +DKLERR+IQLK+E +A+++E D++S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPQPLDKLERRIIQLKLEQQALQKEEDDASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++KE+ + E +Y+ LE++WK EK  +  +Q IK E++  + K+ +A R  D   +S
Sbjct: 440 RLEMLEKELAEKEKEYSELEEVWKSEKAALSGAQHIKAELDNAKTKMEQAYRAGDIAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +LKY  +  LE+ L++    +        + +LL+ +V  EEIAE++SR TGIPV+K+++
Sbjct: 500 ELKYSTIPALEKQLEQAENAE------GKEMSLLRYRVTDEEIAEVLSRATGIPVAKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E  L KRV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEELHKRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E+++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFLFDSEDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+  + GD 
Sbjct: 674 VLLDEVEKAHRDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQS-QAGDL 732

Query: 554 EI--IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
               +K  VM+ V  +FRPEFINRID+ +VF  L ++NI +IA+IQL  L N++ +    
Sbjct: 733 SYGEMKELVMSVVGQHFRPEFINRIDETVVFHPLAKENIRAIASIQLQRLINRMKERGYL 792

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L  S+ AL  +  +G+D +YGAR
Sbjct: 793 LHFSEQALDYLGQVGYDPVYGAR 815


>gi|238896038|ref|YP_002920774.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|238548356|dbj|BAH64707.1| ATP-dependent protease [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 861

 Score =  787 bits (2033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 264 KGVLTDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 324 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S K
Sbjct: 384 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLK 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+   E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 444 RLDMLNEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 504 ELQYGKIPELEKQLAAATQAE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 558 SERDKLLRMEQELHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 618 LCKTLANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 738 YGHMKDLVLGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEV 797

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S  ALK +S  G+D +YGAR
Sbjct: 798 QMSDEALKLLSANGYDPVYGAR 819


>gi|378985221|ref|YP_005248377.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|312913650|dbj|BAJ37624.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
          Length = 857

 Score =  787 bits (2033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LDI  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDIGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSANGYDPVYGAR 815


>gi|156932865|ref|YP_001436781.1| protein disaggregation chaperone [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156531119|gb|ABU75945.1| hypothetical protein ESA_00662 [Cronobacter sakazakii ATCC BAA-894]
          Length = 861

 Score =  787 bits (2033), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 494/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 264 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 324 RQYIEKDAALERRFQKVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 384 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 444 RLDMLNDELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 504 ELQYGKIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 558 SERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 618 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     D
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALD 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V   FRPEFINRID+++VF  L +K+I SIA IQL  L  +L      +
Sbjct: 738 YASMKELVMGVVGQSFRPEFINRIDEVVVFHPLGQKHIASIAQIQLQRLYQRLEDRGYAV 797

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  AL+ +   G+D +YGAR
Sbjct: 798 HISDDALQLLGENGYDPVYGAR 819


>gi|378980143|ref|YP_005228284.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae HS11286]
 gi|364519555|gb|AEW62683.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae HS11286]
          Length = 823

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 166 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 225

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 226 KGVLTDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 285

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 286 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 345

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S K
Sbjct: 346 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLK 405

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+   E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 406 RLDMLNEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 465

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q      +      LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 466 ELQYGKIPELEKQLAAATQ------SEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 519

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 520 SERDKLLRMEQELHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 579

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 580 LCKTLANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 639

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 640 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 699

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 700 YGHMKDLVLGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEV 759

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S  ALK +S  G+D +YGAR
Sbjct: 760 QMSDEALKLLSANGYDPVYGAR 781


>gi|152971442|ref|YP_001336551.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|386036065|ref|YP_005955978.1| protein disaggregation chaperone [Klebsiella pneumoniae KCTC 2242]
 gi|419972349|ref|ZP_14487777.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH1]
 gi|419980701|ref|ZP_14495983.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH2]
 gi|419983727|ref|ZP_14498877.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH4]
 gi|419991779|ref|ZP_14506742.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH5]
 gi|419997789|ref|ZP_14512583.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH6]
 gi|420000915|ref|ZP_14515572.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH7]
 gi|420010860|ref|ZP_14525327.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH8]
 gi|420013477|ref|ZP_14527787.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH9]
 gi|420022400|ref|ZP_14536569.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH10]
 gi|420028218|ref|ZP_14542200.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH11]
 gi|420030071|ref|ZP_14543899.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH12]
 gi|420035798|ref|ZP_14549461.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH14]
 gi|420045302|ref|ZP_14558771.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH16]
 gi|420047908|ref|ZP_14561223.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH17]
 gi|420052980|ref|ZP_14566159.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH18]
 gi|420061850|ref|ZP_14574832.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH19]
 gi|420068245|ref|ZP_14581027.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH20]
 gi|420071034|ref|ZP_14583683.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH21]
 gi|420075822|ref|ZP_14588297.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH22]
 gi|420081380|ref|ZP_14593689.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH23]
 gi|421912823|ref|ZP_16342531.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO]
 gi|421916255|ref|ZP_16345837.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO]
 gi|424831907|ref|ZP_18256635.1| ATP-dependent chaperone ClpB [Klebsiella pneumoniae subsp.
           pneumoniae Ecl8]
 gi|424932241|ref|ZP_18350613.1| Protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KpQ3]
 gi|425075406|ref|ZP_18478509.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
 gi|425082745|ref|ZP_18485842.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
 gi|425086042|ref|ZP_18489135.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
 gi|425092829|ref|ZP_18495913.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
 gi|428151942|ref|ZP_18999645.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO]
 gi|428936035|ref|ZP_19009472.1| protein disaggregation chaperone [Klebsiella pneumoniae JHCK1]
 gi|428942574|ref|ZP_19015558.1| protein disaggregation chaperone [Klebsiella pneumoniae VA360]
 gi|449059107|ref|ZP_21736868.1| protein disaggregation chaperone [Klebsiella pneumoniae hvKP1]
 gi|150956291|gb|ABR78321.1| ATP-dependent protease, Hsp 100 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|339763193|gb|AEJ99413.1| protein disaggregation chaperone [Klebsiella pneumoniae KCTC 2242]
 gi|397344921|gb|EJJ38049.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH2]
 gi|397350758|gb|EJJ43844.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH1]
 gi|397355359|gb|EJJ48369.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH4]
 gi|397362187|gb|EJJ54841.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH6]
 gi|397363043|gb|EJJ55687.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH5]
 gi|397372440|gb|EJJ64924.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH7]
 gi|397377610|gb|EJJ69837.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH8]
 gi|397379560|gb|EJJ71751.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH9]
 gi|397384640|gb|EJJ76753.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH10]
 gi|397392066|gb|EJJ83880.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH11]
 gi|397402530|gb|EJJ94133.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH12]
 gi|397407815|gb|EJJ99200.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH14]
 gi|397409878|gb|EJK01175.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH16]
 gi|397415852|gb|EJK07031.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH17]
 gi|397424397|gb|EJK15295.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH18]
 gi|397426653|gb|EJK17461.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH20]
 gi|397429599|gb|EJK20309.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH19]
 gi|397441120|gb|EJK31508.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH21]
 gi|397448321|gb|EJK38500.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH22]
 gi|397453389|gb|EJK43450.1| protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KPNIH23]
 gi|405594595|gb|EKB68005.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
 gi|405600997|gb|EKB74162.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
 gi|405605974|gb|EKB78974.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
 gi|405611171|gb|EKB83939.1| chaperone ClpB [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
 gi|407806428|gb|EKF77679.1| Protein disaggregation chaperone [Klebsiella pneumoniae subsp.
           pneumoniae KpQ3]
 gi|410113258|emb|CCM85156.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae ST258-K26BO]
 gi|410121488|emb|CCM88462.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae ST258-K28BO]
 gi|414709345|emb|CCN31049.1| ATP-dependent chaperone ClpB [Klebsiella pneumoniae subsp.
           pneumoniae Ecl8]
 gi|426298379|gb|EKV60788.1| protein disaggregation chaperone [Klebsiella pneumoniae VA360]
 gi|426299164|gb|EKV61518.1| protein disaggregation chaperone [Klebsiella pneumoniae JHCK1]
 gi|427538084|emb|CCM95783.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae ST512-K30BO]
 gi|448875203|gb|EMB10228.1| protein disaggregation chaperone [Klebsiella pneumoniae hvKP1]
          Length = 857

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLTDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+   E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q      +      LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATQ------SEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEQELHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 734 YGHMKDLVLGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S  ALK +S  G+D +YGAR
Sbjct: 794 QMSDEALKLLSANGYDPVYGAR 815


>gi|330012953|ref|ZP_08307535.1| ATP-dependent chaperone protein ClpB [Klebsiella sp. MS 92-3]
 gi|419764286|ref|ZP_14290526.1| ATP-dependent chaperone protein ClpB [Klebsiella pneumoniae subsp.
           pneumoniae DSM 30104]
 gi|328533637|gb|EGF60348.1| ATP-dependent chaperone protein ClpB [Klebsiella sp. MS 92-3]
 gi|397742869|gb|EJK90087.1| ATP-dependent chaperone protein ClpB [Klebsiella pneumoniae subsp.
           pneumoniae DSM 30104]
          Length = 861

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 264 KGVLTDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 324 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S K
Sbjct: 384 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLK 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+   E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 444 RLDMLNEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q      +      LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 504 ELQYGKIPELEKQLAAATQ------SEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 558 SERDKLLRMEQELHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 618 LCKTLANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 738 YGHMKDLVLGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEV 797

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S  ALK +S  G+D +YGAR
Sbjct: 798 QMSDEALKLLSANGYDPVYGAR 819


>gi|402779464|ref|YP_006635010.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae 1084]
 gi|402540404|gb|AFQ64553.1| ClpB protein [Klebsiella pneumoniae subsp. pneumoniae 1084]
          Length = 857

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLTDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+   E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLNMLNEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATQAE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEQELHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 734 YGHMKDLVLGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S  ALK +S  G+D +YGAR
Sbjct: 794 QMSDEALKLLSANGYDPVYGAR 815


>gi|340000316|ref|YP_004731200.1| ClpB protein [Salmonella bongori NCTC 12419]
 gi|339513678|emb|CCC31433.1| ClpB protein (heat shock protein f84.1) [Salmonella bongori NCTC
           12419]
          Length = 857

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+N  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELNDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YGRMKEMVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIARIQLQRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSANGYDPVYGAR 815


>gi|421450965|ref|ZP_15900333.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 58-6482]
 gi|396064558|gb|EJI72943.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 58-6482]
          Length = 857

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLAMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSANGYDPVYGAR 815


>gi|424800712|ref|ZP_18226254.1| ClpB protein [Cronobacter sakazakii 696]
 gi|429120813|ref|ZP_19181474.1| ClpB protein [Cronobacter sakazakii 680]
 gi|423236433|emb|CCK08124.1| ClpB protein [Cronobacter sakazakii 696]
 gi|426324731|emb|CCK12211.1| ClpB protein [Cronobacter sakazakii 680]
          Length = 857

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 494/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNDELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V   FRPEFINRID+++VF  L +K+I SIA IQL  L  +L      +
Sbjct: 734 YASMKELVMGVVGQSFRPEFINRIDEVVVFHPLGQKHIASIAQIQLQRLYQRLEDRGYAV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  AL+ +   G+D +YGAR
Sbjct: 794 HISDDALQLLGENGYDPVYGAR 815


>gi|88857985|ref|ZP_01132627.1| ATP-dependent protease, Hsp 100 [Pseudoalteromonas tunicata D2]
 gi|88819602|gb|EAR29415.1| ATP-dependent protease, Hsp 100 [Pseudoalteromonas tunicata D2]
          Length = 860

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/622 (60%), Positives = 497/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKDKRVLSLDLGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HT++G GK +G++DAGNMLKP LSRGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKEEGRVILFIDEIHTIVGAGKSDGAMDAGNMLKPALSRGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPTVEDTIAILRGLKERYELHHSVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + ++++IDSKPE++DKLER++IQLK+E  A+ +E DE+S +
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSLRMQIDSKPEVLDKLERKIIQLKLEDNALAKEKDEASLQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R   IK++I  L+ +Y  L+++W  EK  ++ +Q IK E+E+ RL +  A R SD Q +S
Sbjct: 440 RQQDIKQQILVLDKQYNELDEVWIAEKASLQGTQVIKTELEQARLDLEIARRASDLQRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L   SQ ++Q         LL+ KVG  EIAEI+SR TGIPV+K++Q
Sbjct: 500 ELQYGRIPELERKLDLASQVEMQ------DMRLLRNKVGENEIAEILSRWTGIPVTKMLQ 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER KLL +E  L  +V+GQDEA++AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERSKLLKMEENLHTQVIGQDEAVTAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LTKALATFLFDTEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E     D
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDVIQEHAVNSD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E +K  +M+ +   FRPEFINRIDD +VF  L+ ++I  IA+IQL  LK +L+     +
Sbjct: 734 YERLKAMLMDVLTTQFRPEFINRIDDTVVFHPLSTEHIKHIADIQLAKLKQRLVDNGYTM 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +++  AL +++  GFD ++GAR
Sbjct: 794 RLTDEALSQLALAGFDPVFGAR 815


>gi|400287671|ref|ZP_10789703.1| chaperonin clpA/B [Psychrobacter sp. PAMC 21119]
          Length = 865

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/622 (58%), Positives = 500/622 (80%), Gaps = 1/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQ+IING+VP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQKIINGDVPEGLRRKEVLSLDLGALIAGAKFRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 257 KSVLSDLAKQEGNVILFIDELHTMVGAGKSEGAMDAGNMLKPALARGELHCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+ +S+R
Sbjct: 317 RKYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVDIQDSAIIAAARMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+++++E+DSKPE + KL+ RLIQLK++ E +K E D  ++ 
Sbjct: 377 YITDRKLPDKAIDLIDEAASRLRMEMDSKPESLGKLDSRLIQLKMQREVLKNEEDAGAQA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
               +  +I +LE +YA+L +IW+ EK L+K SQQ+K+E++K R+  +KA+R+ D++T+S
Sbjct: 437 ERKALNAQIEELEKEYADLNEIWQAEKALVKGSQQLKDELDKARIAYDKASREGDYETMS 496

Query: 314 KLKYGELNKLERILKEKS-QKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIV 372
           KL+Y  + +LER + E    +  +     +   LL+ KV   EIAE+V+  TGIPV+K++
Sbjct: 497 KLQYETIPQLERRITESDLAEQKEQTGEGSGVKLLRNKVTDNEIAEVVAAATGIPVNKMM 556

Query: 373 QVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKT 432
           Q EREK+L +E  L +RV+GQDEA+ AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKT
Sbjct: 557 QGEREKMLAMEEKLHERVIGQDEAVEAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKT 616

Query: 433 ELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYS 492
           EL K+L+  +F++E+SI+RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS
Sbjct: 617 ELTKSLANFLFDSEDSIVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGALTEAVRRKPYS 676

Query: 493 LILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGD 552
           +IL DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+I+MTSNLGS KI+EM    
Sbjct: 677 VILFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIIMTSNLGSHKIQEMVGES 736

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E IK  VM+ V  +FRPEF+NRID+I+VF  L    +  IA IQL+ L+ +L +  MD+
Sbjct: 737 YEDIKAEVMDSVGQHFRPEFVNRIDEIVVFHPLGMSQMAGIATIQLDRLRQRLHEREMDI 796

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S  A+ K+  +G+D +YGAR
Sbjct: 797 ELSADAMNKLVAVGYDPVYGAR 818


>gi|334706239|ref|ZP_08522105.1| ATP-dependent chaperone protein ClpB [Aeromonas caviae Ae398]
          Length = 857

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/622 (59%), Positives = 500/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIG PGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGAPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  +I+F+DELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDLAKEEGSVILFVDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQY+EKDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+R
Sbjct: 320 RQYVEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+K
Sbjct: 380 YIADRQLPDKAIDLIDEAAASIRLQIDSKPESLDRLERRIIQLKLEQQALMKEDDDASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L+ +E+ + E +Y  LE++WK EK  +  +Q IK  +E+ R  +  A R  D   +S
Sbjct: 440 RLDLLNQELTEKEREYNELEEVWKAEKAALAGTQHIKAALEQARQDLEVARRAGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + +LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEDQLHSRVIGQEEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ +++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALAEFLFDTQDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHHSEKD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  +M  +   FRPEFINRID+ +VF  L  ++I SIA IQL  L N+L     ++
Sbjct: 734 YDEMKAMLMEVLTRSFRPEFINRIDETVVFHPLGEEHIKSIARIQLKSLMNRLESQGFEV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S+  L K+ + GFD +YGAR
Sbjct: 794 EVSEELLTKLVHAGFDPVYGAR 815


>gi|291086328|ref|ZP_06355437.2| ATP-dependent chaperone protein ClpB [Citrobacter youngae ATCC
           29220]
 gi|291068913|gb|EFE07022.1| ATP-dependent chaperone protein ClpB [Citrobacter youngae ATCC
           29220]
          Length = 861

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 264 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 324 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 384 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 444 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 504 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 558 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 618 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 738 YSHMKDMVLGVVSHNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEI 797

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 798 HISDEALKLLSANGYDPVYGAR 819


>gi|206578585|ref|YP_002237070.1| protein disaggregation chaperone [Klebsiella pneumoniae 342]
 gi|288934032|ref|YP_003438091.1| ATP-dependent chaperone ClpB [Klebsiella variicola At-22]
 gi|290510908|ref|ZP_06550277.1| ATP-dependent chaperone ClpB [Klebsiella sp. 1_1_55]
 gi|206567643|gb|ACI09419.1| ATP-dependent chaperone ClpB [Klebsiella pneumoniae 342]
 gi|288888761|gb|ADC57079.1| ATP-dependent chaperone ClpB [Klebsiella variicola At-22]
 gi|289775901|gb|EFD83900.1| ATP-dependent chaperone ClpB [Klebsiella sp. 1_1_55]
          Length = 857

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLTDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+   E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q      +      LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATQ------SEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEQELHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 734 YGHMKDLVLGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S  ALK +S  G+D +YGAR
Sbjct: 794 RMSDEALKLLSANGYDPVYGAR 815


>gi|336246710|ref|YP_004590420.1| protein disaggregation chaperone [Enterobacter aerogenes KCTC 2190]
 gi|334732766|gb|AEG95141.1| protein disaggregation chaperone [Enterobacter aerogenes KCTC 2190]
          Length = 857

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 497/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKEADEASLK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+   E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELADKESQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRLGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q      +      LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLAAATQ------SEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQDLHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 734 YGHMKDLVLGVVSQRFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +S  ALK +S  G+D +YGAR
Sbjct: 794 HMSDEALKLLSENGYDPVYGAR 815


>gi|71065383|ref|YP_264110.1| chaperonin clpA/B [Psychrobacter arcticus 273-4]
 gi|71038368|gb|AAZ18676.1| putative chaperonin clpA/B [Psychrobacter arcticus 273-4]
          Length = 865

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/624 (58%), Positives = 504/624 (80%), Gaps = 5/624 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQ+IING+VP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQKIINGDVPEGLRRKEVLSLDLGALIAGAKFRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 257 KAVLSDLSKQEGNVILFIDELHTLVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+ +S+R
Sbjct: 317 RKYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVDIQDSAIIAAARMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+++++E+DSKPE + KL+ RLIQLK++ E +K E D  ++ 
Sbjct: 377 YITDRKLPDKAIDLIDEAASRLRMEMDSKPESLGKLDSRLIQLKMQREVLKNEEDAGAQA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
              ++  +I +LE +YA+L +IW+ EK L+K SQQ+K+E++K R+  +KA+R+ D++T+S
Sbjct: 437 ERKVLDAQIEELEKEYADLNEIWQAEKALVKGSQQLKDELDKARIAYDKASREGDYETMS 496

Query: 314 KLKYGELNKLERILKEKS---QKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSK 370
           KL+Y  + +LER + E     QK+    N+  K  LL+ KV   EIAE+V+  TGIPVSK
Sbjct: 497 KLQYETIPQLERRIHESDLAEQKEQTGENSGVK--LLRNKVTDNEIAEVVAAATGIPVSK 554

Query: 371 IVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVG 430
           ++Q ER+K+L +E  L +RV+GQDEA+ AV+NA+RRSR+GLSD  RP GSF+FLGPTGVG
Sbjct: 555 MLQGERDKMLAMEENLHERVIGQDEAVEAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVG 614

Query: 431 KTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKP 490
           KTEL K+L+  +F++E++I+RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKP
Sbjct: 615 KTELTKSLANFLFDSEDAIVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGALTEAVRRKP 674

Query: 491 YSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK 550
           YS+IL DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+I+MTSNLGS KI+EM  
Sbjct: 675 YSVILFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIIMTSNLGSHKIQEMVG 734

Query: 551 GDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNM 610
              E IK  VM+ V  +FRPEF+NRID+I+VF  L    +  IA IQLN L+ +L +  +
Sbjct: 735 ESYEDIKAEVMDSVGQHFRPEFVNRIDEIVVFHPLGMSQMAGIAAIQLNRLRQRLYEREL 794

Query: 611 DLKISKAALKKISNIGFDLIYGAR 634
           D+++S  A+ K+  +G+D +YGAR
Sbjct: 795 DIELSADAMNKLVAVGYDPVYGAR 818


>gi|395234382|ref|ZP_10412606.1| protein disaggregation chaperone [Enterobacter sp. Ag1]
 gi|394730828|gb|EJF30655.1| protein disaggregation chaperone [Enterobacter sp. Ag1]
          Length = 857

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/654 (57%), Positives = 512/654 (78%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S+K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+   E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLSMLNEELEDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEKELHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +    +
Sbjct: 734 YGHMKDLVLGVVSQSFRPEFINRIDEVVVFHPLGERHIASIAQIQLQRLYKRLEERGYGV 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            IS  ALK IS  G+D +YGAR +   K+++   +     ++P A  I  G+LI
Sbjct: 794 SISDDALKLISENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839


>gi|432802779|ref|ZP_20036748.1| chaperone ClpB [Escherichia coli KTE84]
 gi|431347921|gb|ELG34798.1| chaperone ClpB [Escherichia coli KTE84]
          Length = 857

 Score =  787 bits (2032), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 499/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK++S  G+D +YGAR
Sbjct: 794 HISDEALKQLSENGYDPVYGAR 815


>gi|308187863|ref|YP_003931994.1| chaperone protein clpB [Pantoea vagans C9-1]
 gi|308058373|gb|ADO10545.1| Chaperone protein clpB [Pantoea vagans C9-1]
          Length = 857

 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLSDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALKKEADDASIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ E+N+ E +YA LE  WK EK  +  +Q IK E+E+ RL + +A R+ D   +S
Sbjct: 440 RLEMLETELNQKEREYAELEDEWKTEKASLSGTQNIKAELEQARLNLEQARRQGDLAQMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLAAATQAE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEQDLHGRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKSLANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E      
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQERFGNLS 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V  +FRPEF+NRID+++VF  L  K+I SIA IQL  L  +L +    L
Sbjct: 734 YPEMKDIVMGVVGQHFRPEFVNRIDEVVVFHPLAEKHIASIAQIQLQRLYKRLDERGYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS+ A+K ++  G+D +YGAR
Sbjct: 794 HISEDAIKLLAENGYDPVYGAR 815


>gi|421856930|ref|ZP_16289288.1| chaperone protein ClpB [Acinetobacter radioresistens DSM 6976 =
           NBRC 102413]
 gi|403187677|dbj|GAB75489.1| chaperone protein ClpB [Acinetobacter radioresistens DSM 6976 =
           NBRC 102413]
          Length = 859

 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/622 (59%), Positives = 503/622 (80%), Gaps = 6/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL  K++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKDKQVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  +I+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLNDLAKQEGRVILFIDELHTLVGAGKTDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVKILDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+E+DSKPE +DKL+RRLIQLK++ EA+K++ D  SK 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMELDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKS 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++K+I +++ +Y +LE++WK EKTL++ +++ + E+++ R+ + KA R+ DW   S
Sbjct: 437 EVNYLEKQIEEVQKEYNDLEEVWKAEKTLVEGTKKAQVELDQARVALEKAQREGDWAEAS 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ L++      ++  +  +  LL+ KV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 RLQYGVIPELQKQLEQD-----EVIEDHEEPKLLRNKVTDNEIAEVVSAATGIPVAKMLQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E  L  RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GEREKLLHMEEFLHNRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           IL DE+EKA+ DVFNILLQ+LDDGRLTD++GR I+F+NT+IVMTSNLGS  ++E+ +G  
Sbjct: 672 ILFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVIDFKNTVIVMTSNLGSQDVRELGEGAS 731

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E ++  VMN V  +FRPEFINRID++++F  L +  I  IA+IQL  L+++L + +M L
Sbjct: 732 DEEMRSVVMNAVSHHFRPEFINRIDELVIFHSLKKSQIRGIADIQLERLRSRLAERDMSL 791

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            I   A   + + GFD +YGAR
Sbjct: 792 TIDDTAFDLLIDAGFDPVYGAR 813


>gi|153871333|ref|ZP_02000531.1| ClpB protein [Beggiatoa sp. PS]
 gi|152072199|gb|EDN69467.1| ClpB protein [Beggiatoa sp. PS]
          Length = 826

 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/654 (58%), Positives = 511/654 (78%), Gaps = 9/654 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGE G GKTAIVEGLAQRIINGEVP SL +K +L LD+  L+AG K+RGEFE+RL
Sbjct: 169 NNPVLIGEAGTGKTAIVEGLAQRIINGEVPESLKNKHLLSLDMGALIAGAKFRGEFEERL 228

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 229 KAVLSDLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCIGATTLDEY 288

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKDAA ERRFQK+LV EP++E+TI+ILRGL+++YEVHHGV+ITDPAIVAA+ LS+R
Sbjct: 289 RKYVEKDAALERRFQKVLVNEPNVEDTIAILRGLKERYEVHHGVDITDPAIVAAATLSHR 348

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEA ++I++EIDSKPE +DKL+RRLIQLKIE EA+K+E D +SK 
Sbjct: 349 YITDRQLPDKAIDLVDEAGSRIRMEIDSKPERIDKLDRRLIQLKIEREAMKKEKDRASKL 408

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +  EI +LE + A+L +IW+ EK  ++D  ++KEE+E+  L +  A R +D + ++
Sbjct: 409 RLEKLHDEIEQLEKELADLMEIWRTEKASVQDVSKVKEELEQAHLALETAGRANDLEQMA 468

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+Y ++  L++ L   SQ +           LL+  V  EEIA++VS+ TGIPVSK+++
Sbjct: 469 QLQYEKIPSLKKQLVIASQVE-----QKGNMQLLRNAVTEEEIADVVSKWTGIPVSKMLE 523

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  + +RVVGQDEA+  V+NAIRRSR+GL+D  +P GSF+FLGPTGVGKTE
Sbjct: 524 GERDKLLRMEEAVHQRVVGQDEAVHTVANAIRRSRAGLADPNKPNGSFLFLGPTGVGKTE 583

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ +E+++R+DMSEF+EKHS++RLIGAPPGYIGY+EGGYLTE VRRKPYS+
Sbjct: 584 LCKALANFLFDTDEAMVRLDMSEFMEKHSVARLIGAPPGYIGYDEGGYLTEAVRRKPYSV 643

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVF +LLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I+EM   + 
Sbjct: 644 ILLDEVEKAHPDVFGVLLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQFIQEMAGEEN 703

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E +K AVM  V  +FRPEFINR+DDI+VF  L R +I +IA++Q++ L+ +L   +M+L
Sbjct: 704 YETMKTAVMEIVGQHFRPEFINRVDDIVVFHPLGRTHIRAIADLQIDYLRKRLQAQHMNL 763

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            +   AL+ +   GFD +YGAR +   K+++  LL+    +   A     GD I
Sbjct: 764 VVDDIALEHLGEAGFDPVYGARPL---KRAIQQLLENSLAQEILAGQFMPGDTI 814


>gi|213424878|ref|ZP_03357628.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|417424063|ref|ZP_12160358.1| ClpB protein [Salmonella enterica subsp. enterica serovar
           Mississippi str. A4-633]
 gi|353617828|gb|EHC68696.1| ClpB protein [Salmonella enterica subsp. enterica serovar
           Mississippi str. A4-633]
          Length = 798

 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 141 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 200

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 201 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 260

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 261 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 320

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 321 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 380

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 381 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 440

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 441 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLE 494

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 495 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 554

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 555 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 614

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 615 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 674

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 675 YGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEI 734

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 735 HISDEALKLLSANGYDPVYGAR 756


>gi|157962981|ref|YP_001503015.1| ATPase [Shewanella pealeana ATCC 700345]
 gi|157847981|gb|ABV88480.1| ATPase AAA-2 domain protein [Shewanella pealeana ATCC 700345]
          Length = 857

 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/623 (59%), Positives = 495/623 (79%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIIN EVP  + +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINNEVPEGIKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 260 KAVLNELSQEEGQVILFIDELHTMVGAGKSDGAMDAGNMLKPALARGDLHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ +S+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHHVEITDPAIVAAASMSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR IQLK+E +A+ +E DE+S +
Sbjct: 380 YISDRKLPDKAIDLIDEAASSIRIQIDSKPESLDRLERRAIQLKLEEQALSKEADEASLR 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ E+  +E K A L +IW  EK  +  +Q IK ++E+ R+ +  A R  D   +S
Sbjct: 440 RLDTLRAELKDVEAKGAELNEIWHTEKAALAGTQHIKADLEQARMDLEVARRAGDLTRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q        TLL+ KV   EIAE++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------DMTLLRNKVTDVEIAEVLSKATGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RV+GQ+EA+ +VSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLKMEDALHERVIGQNEAVDSVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+ E +++R+DMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKSLAKFLFDTESALVRVDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I ++  G +
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLI-QLGFGTQ 732

Query: 554 --EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             + +K  VM  V   FRPEF+NR+D+ +VF  L+ KNI  IA IQ+  LK +L   +  
Sbjct: 733 SYDEMKSDVMQVVMQNFRPEFLNRVDEAVVFHPLDEKNIAHIAKIQIEGLKKRLADKDYG 792

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L++S  AL  I+  GFD +YGAR
Sbjct: 793 LEMSDDALALIARAGFDPVYGAR 815


>gi|421846352|ref|ZP_16279501.1| protein disaggregation chaperone [Citrobacter freundii ATCC 8090 =
           MTCC 1658]
 gi|411772505|gb|EKS56120.1| protein disaggregation chaperone [Citrobacter freundii ATCC 8090 =
           MTCC 1658]
          Length = 857

 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/654 (57%), Positives = 513/654 (78%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YGHMKDMVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            IS  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+LI
Sbjct: 794 HISDEALKLLSANGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839


>gi|237729507|ref|ZP_04559988.1| disaggregation chaperone [Citrobacter sp. 30_2]
 gi|226908113|gb|EEH94031.1| disaggregation chaperone [Citrobacter sp. 30_2]
          Length = 861

 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/654 (57%), Positives = 513/654 (78%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 264 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 324 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 384 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 444 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 504 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 558 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 618 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 738 YGHMKDMVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEI 797

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            IS  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+LI
Sbjct: 798 HISDEALKLLSANGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 843


>gi|455643273|gb|EMF22401.1| protein disaggregation chaperone [Citrobacter freundii GTC 09479]
          Length = 857

 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/654 (57%), Positives = 513/654 (78%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YGHMKDMVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            IS  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+LI
Sbjct: 794 HISDEALKLLSANGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839


>gi|417789785|ref|ZP_12437399.1| protein disaggregation chaperone [Cronobacter sakazakii E899]
 gi|429115632|ref|ZP_19176550.1| ClpB protein [Cronobacter sakazakii 701]
 gi|449307191|ref|YP_007439547.1| protein disaggregation chaperone [Cronobacter sakazakii SP291]
 gi|333956142|gb|EGL73831.1| protein disaggregation chaperone [Cronobacter sakazakii E899]
 gi|426318761|emb|CCK02663.1| ClpB protein [Cronobacter sakazakii 701]
 gi|449097224|gb|AGE85258.1| protein disaggregation chaperone [Cronobacter sakazakii SP291]
          Length = 857

 Score =  786 bits (2031), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 493/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+   E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNDELADKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V   FRPEFINRID+++VF  L +K+I SIA IQL  L  +L      +
Sbjct: 734 YASMKELVMGVVGQSFRPEFINRIDEVVVFHPLGQKHIASIAQIQLQRLYQRLEDRGYAV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  AL+ +   G+D +YGAR
Sbjct: 794 HISDDALQLLGENGYDPVYGAR 815


>gi|16761514|ref|NP_457131.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|16765976|ref|NP_461591.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|29142985|ref|NP_806327.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|167992437|ref|ZP_02573535.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168244680|ref|ZP_02669612.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|194448814|ref|YP_002046666.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|197265769|ref|ZP_03165843.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|213051813|ref|ZP_03344691.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213649749|ref|ZP_03379802.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213850142|ref|ZP_03381040.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|289824160|ref|ZP_06543755.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|374981290|ref|ZP_09722618.1| ClpB protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. TN061786]
 gi|378451422|ref|YP_005238782.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|378700559|ref|YP_005182516.1| ClpB protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|378960787|ref|YP_005218273.1| hypothetical protein STBHUCCB_27630 [Salmonella enterica subsp.
           enterica serovar Typhi str. P-stx-12]
 gi|378990038|ref|YP_005253202.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
 gi|379701895|ref|YP_005243623.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. ST4/74]
 gi|383497334|ref|YP_005398023.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 798]
 gi|386592406|ref|YP_006088806.1| ClpB protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. B182]
 gi|419728971|ref|ZP_14255933.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41579]
 gi|419734207|ref|ZP_14261101.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41563]
 gi|419739788|ref|ZP_14266531.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41573]
 gi|419745026|ref|ZP_14271670.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41566]
 gi|419749085|ref|ZP_14275574.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41565]
 gi|421569097|ref|ZP_16014803.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Heidelberg str. CFSAN00322]
 gi|421576391|ref|ZP_16021991.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Heidelberg str. CFSAN00325]
 gi|421580578|ref|ZP_16026133.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Heidelberg str. CFSAN00326]
 gi|421585217|ref|ZP_16030718.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Heidelberg str. CFSAN00328]
 gi|422029085|ref|ZP_16375372.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm1]
 gi|422034033|ref|ZP_16380081.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm2]
 gi|427559032|ref|ZP_18930585.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm8]
 gi|427577459|ref|ZP_18935334.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm9]
 gi|427580449|ref|ZP_18935833.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm3]
 gi|427614308|ref|ZP_18942999.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm4]
 gi|427647668|ref|ZP_18949985.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm6]
 gi|427659054|ref|ZP_18954643.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm10]
 gi|427664422|ref|ZP_18959627.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm11]
 gi|427683412|ref|ZP_18964451.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm12]
 gi|427802802|ref|ZP_18970120.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm5]
 gi|54035784|sp|Q7AMH5.1|CLPB_SALTI RecName: Full=Chaperone protein ClpB
 gi|54035786|sp|Q7CQ01.1|CLPB_SALTY RecName: Full=Chaperone protein ClpB
 gi|25289914|pir||AI0831 ClpB protein (heat shock protein f84.1) [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16421207|gb|AAL21550.1| ATP-dependent protease [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|16503815|emb|CAD05840.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29138617|gb|AAO70187.1| ClpB protein [Salmonella enterica subsp. enterica serovar Typhi
           str. Ty2]
 gi|194407118|gb|ACF67337.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|197244024|gb|EDY26644.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|205329269|gb|EDZ16033.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205336469|gb|EDZ23233.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|267994801|gb|ACY89686.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301159207|emb|CBW18722.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|321223454|gb|EFX48519.1| ClpB protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. TN061786]
 gi|323130994|gb|ADX18424.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. ST4/74]
 gi|332989585|gb|AEF08568.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
 gi|374354659|gb|AEZ46420.1| hypothetical protein STBHUCCB_27630 [Salmonella enterica subsp.
           enterica serovar Typhi str. P-stx-12]
 gi|380464155|gb|AFD59558.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 798]
 gi|381297674|gb|EIC38761.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41573]
 gi|381298111|gb|EIC39193.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41579]
 gi|381298283|gb|EIC39363.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41563]
 gi|381306782|gb|EIC47652.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41566]
 gi|381312527|gb|EIC53325.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Heidelberg str. 41565]
 gi|383799450|gb|AFH46532.1| ClpB protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. B182]
 gi|402518796|gb|EJW26167.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Heidelberg str. CFSAN00325]
 gi|402519783|gb|EJW27143.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Heidelberg str. CFSAN00326]
 gi|402528382|gb|EJW35638.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Heidelberg str. CFSAN00322]
 gi|402530399|gb|EJW37619.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Heidelberg str. CFSAN00328]
 gi|414010482|gb|EKS94492.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm1]
 gi|414010674|gb|EKS94670.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm8]
 gi|414011341|gb|EKS95305.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm2]
 gi|414025628|gb|EKT08946.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm9]
 gi|414035015|gb|EKT17919.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm4]
 gi|414038868|gb|EKT21570.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm3]
 gi|414039633|gb|EKT22303.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm6]
 gi|414040024|gb|EKT22662.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm10]
 gi|414044093|gb|EKT26555.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm11]
 gi|414053652|gb|EKT35638.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm12]
 gi|414055415|gb|EKT37309.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Typhimurium str. STm5]
          Length = 857

 Score =  786 bits (2030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSANGYDPVYGAR 815


>gi|422369617|ref|ZP_16450017.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 16-3]
 gi|315298640|gb|EFU57895.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 16-3]
          Length = 861

 Score =  786 bits (2030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 499/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 264 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 324 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 384 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 444 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 504 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 558 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 618 LCKALANFMFDSDEAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V++ V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 738 YAHMKELVLDVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 797

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 798 HISDEALKLLSENGYDPVYGAR 819


>gi|449473904|ref|XP_004154017.1| PREDICTED: chaperone protein ClpB-like [Cucumis sativus]
          Length = 861

 Score =  786 bits (2030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 499/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 264 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 324 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 384 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALNKESDEASKK 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+++ E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 444 RLDMLNEELDEKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+      Q +I   +      LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 504 ELQYGKIPELEK------QLEIATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 558 SEREKLLRMEQDLHQRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 618 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 738 YSHMKDLVLGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEI 797

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 798 HISDDALKLLSENGYDPVYGAR 819


>gi|395231533|ref|ZP_10409821.1| disaggregation chaperone [Citrobacter sp. A1]
 gi|424734303|ref|ZP_18162842.1| protein disaggregation chaperone [Citrobacter sp. L17]
 gi|394714742|gb|EJF20646.1| disaggregation chaperone [Citrobacter sp. A1]
 gi|422891883|gb|EKU31894.1| protein disaggregation chaperone [Citrobacter sp. L17]
          Length = 857

 Score =  786 bits (2030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/654 (57%), Positives = 513/654 (78%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELDDKECQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YGHMKDMVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            IS  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+LI
Sbjct: 794 HISDEALKLLSANGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839


>gi|420374600|ref|ZP_14874564.1| ATP-dependent chaperone ClpB [Shigella flexneri 1235-66]
 gi|391316060|gb|EIQ73544.1| ATP-dependent chaperone ClpB [Shigella flexneri 1235-66]
          Length = 820

 Score =  786 bits (2030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/654 (57%), Positives = 513/654 (78%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 163 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 222

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 223 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 282

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 283 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 342

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 343 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 402

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 403 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 462

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 463 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 516

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 517 GEREKLLRMEQDLHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 576

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 577 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 636

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 637 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 696

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 697 YSHMKDMVLGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIATIQLQRLYKRLEERGYEI 756

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            IS  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+LI
Sbjct: 757 HISDEALKLLSVNGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 802


>gi|334125226|ref|ZP_08499217.1| chaperone protein ClpB [Enterobacter hormaechei ATCC 49162]
 gi|333387301|gb|EGK58501.1| chaperone protein ClpB [Enterobacter hormaechei ATCC 49162]
          Length = 861

 Score =  786 bits (2030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 499/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 264 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 324 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 384 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALNKESDEASKK 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+++ E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 444 RLDMLNEELDEKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+      Q +I   +      LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 504 ELQYGKIPELEK------QLEIATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 558 SEREKLLRMEQDLHQRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 618 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 738 YSHMKDLVLGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEI 797

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 798 HISDDALKLLSANGYDPVYGAR 819


>gi|365101806|ref|ZP_09332436.1| chaperone ClpB [Citrobacter freundii 4_7_47CFAA]
 gi|363647356|gb|EHL86585.1| chaperone ClpB [Citrobacter freundii 4_7_47CFAA]
          Length = 857

 Score =  786 bits (2030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/654 (57%), Positives = 513/654 (78%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YGHMKDMVLGVVSNNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            IS  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+LI
Sbjct: 794 HISDEALKLLSANGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839


>gi|205353699|ref|YP_002227500.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|375124555|ref|ZP_09769719.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Gallinarum str. SG9]
 gi|205273480|emb|CAR38457.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|326628805|gb|EGE35148.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Gallinarum str. SG9]
          Length = 857

 Score =  786 bits (2030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSANGYDPVYGAR 815


>gi|260598973|ref|YP_003211544.1| protein disaggregation chaperone [Cronobacter turicensis z3032]
 gi|260218150|emb|CBA32972.1| Chaperone protein clpB [Cronobacter turicensis z3032]
          Length = 857

 Score =  786 bits (2030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/622 (59%), Positives = 494/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNDELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEEDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V   FRPEFINRID+++VF  L +++I SIA IQL  L  +L      +
Sbjct: 734 YASMKELVMGVVGQSFRPEFINRIDEVVVFHPLGQQHIASIAQIQLQRLYQRLEDRGYAM 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  AL+ +   G+D +YGAR
Sbjct: 794 HISDDALQLLGENGYDPVYGAR 815


>gi|157148104|ref|YP_001455423.1| protein disaggregation chaperone [Citrobacter koseri ATCC BAA-895]
 gi|157085309|gb|ABV14987.1| hypothetical protein CKO_03914 [Citrobacter koseri ATCC BAA-895]
          Length = 861

 Score =  786 bits (2030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/654 (57%), Positives = 513/654 (78%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 264 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 324 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 384 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 444 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 504 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 558 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 618 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 738 YGHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEI 797

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            IS  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+LI
Sbjct: 798 HISDDALKLLSANGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 843


>gi|311278478|ref|YP_003940709.1| ATP-dependent chaperone ClpB [Enterobacter cloacae SCF1]
 gi|308747673|gb|ADO47425.1| ATP-dependent chaperone ClpB [Enterobacter cloacae SCF1]
          Length = 857

 Score =  786 bits (2030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLSLDMGSLVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S+K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELDDKERQYSALEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 734 YGHMKDLVLGVVSHSFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSENGYDPVYGAR 815


>gi|375002451|ref|ZP_09726791.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
           enterica serovar Infantis str. SARB27]
 gi|353077139|gb|EHB42899.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
           enterica serovar Infantis str. SARB27]
          Length = 861

 Score =  786 bits (2030), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 264 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 324 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 384 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 444 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 504 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 558 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 618 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 738 YGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEI 797

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 798 HISDEALKLLSANGYDPVYGAR 819


>gi|444355311|ref|YP_007391455.1| ClpB protein [Enterobacter aerogenes EA1509E]
 gi|443906141|emb|CCG33915.1| ClpB protein [Enterobacter aerogenes EA1509E]
          Length = 812

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 497/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 155 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 214

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 215 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 274

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 275 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 334

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S K
Sbjct: 335 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKEADEASLK 394

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+   E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 395 RLDMLNEELADKESQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRLGDLARMS 454

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q      +      LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 455 ELQYGKIPELEKQLAAATQ------SEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMME 508

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 509 SEREKLLRMEQDLHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 568

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 569 LCKTLANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 628

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 629 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 688

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 689 YGHMKDLVLGVVSQRFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEV 748

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +S  ALK +S  G+D +YGAR
Sbjct: 749 HMSDEALKLLSENGYDPVYGAR 770


>gi|56414627|ref|YP_151702.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62181233|ref|YP_217650.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|168262170|ref|ZP_02684143.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|168464169|ref|ZP_02698086.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168822477|ref|ZP_02834477.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|194443281|ref|YP_002041924.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194472869|ref|ZP_03078853.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194736447|ref|YP_002115671.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197248685|ref|YP_002147563.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197363554|ref|YP_002143191.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|198243260|ref|YP_002216671.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200388055|ref|ZP_03214667.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|204929414|ref|ZP_03220488.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|224584513|ref|YP_002638311.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238909506|ref|ZP_04653343.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|375115573|ref|ZP_09760743.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SCSA50]
 gi|375120160|ref|ZP_09765327.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Dublin str. SD3246]
 gi|409246359|ref|YP_006887066.1| Chaperone protein clpB 2 [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|416425230|ref|ZP_11692265.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|416428136|ref|ZP_11693636.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|416438592|ref|ZP_11699571.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|416444260|ref|ZP_11703575.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|416451863|ref|ZP_11708613.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|416457253|ref|ZP_11712041.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|416471313|ref|ZP_11719159.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|416474725|ref|ZP_11720290.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|416489037|ref|ZP_11726006.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|416497226|ref|ZP_11729608.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|416507694|ref|ZP_11735638.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. SARB31]
 gi|416515027|ref|ZP_11738438.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. ATCC BAA710]
 gi|416527361|ref|ZP_11743196.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. LQC 10]
 gi|416532861|ref|ZP_11745893.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. SARB30]
 gi|416540936|ref|ZP_11750686.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|416549265|ref|ZP_11755302.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 29N]
 gi|416563432|ref|ZP_11762785.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 42N]
 gi|416573080|ref|ZP_11767664.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 4441 H]
 gi|416579681|ref|ZP_11771475.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|416587188|ref|ZP_11775896.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|416594256|ref|ZP_11780337.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|416597887|ref|ZP_11782274.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|416606432|ref|ZP_11787774.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|416616636|ref|ZP_11794260.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|416619236|ref|ZP_11794996.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|416632441|ref|ZP_11801430.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|416640766|ref|ZP_11805195.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|416647656|ref|ZP_11808528.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|416661132|ref|ZP_11815354.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|416665644|ref|ZP_11816879.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|416677945|ref|ZP_11822385.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|416706416|ref|ZP_11831675.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|416711904|ref|ZP_11835615.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|416718100|ref|ZP_11840208.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|416726683|ref|ZP_11846728.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|416733321|ref|ZP_11850397.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|416737812|ref|ZP_11852954.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|416747220|ref|ZP_11858196.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|416758177|ref|ZP_11863529.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|416765406|ref|ZP_11868787.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|416771063|ref|ZP_11872368.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|418482222|ref|ZP_13051245.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 80959-06]
 gi|418492655|ref|ZP_13059136.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. CT_02035278]
 gi|418497418|ref|ZP_13063838.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. CT_02035318]
 gi|418500676|ref|ZP_13067070.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. CT_02035320]
 gi|418504930|ref|ZP_13071283.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. CT_02035321]
 gi|418510546|ref|ZP_13076826.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. CT_02035327]
 gi|418524997|ref|ZP_13090981.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008286]
 gi|418760238|ref|ZP_13316395.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 35185]
 gi|418766415|ref|ZP_13322491.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 35199]
 gi|418773353|ref|ZP_13329340.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 21539]
 gi|418774360|ref|ZP_13330329.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 33953]
 gi|418780080|ref|ZP_13335973.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 35188]
 gi|418782674|ref|ZP_13338535.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 21559]
 gi|418790107|ref|ZP_13345887.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 19447]
 gi|418791658|ref|ZP_13347413.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 19449]
 gi|418797885|ref|ZP_13353567.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 19567]
 gi|418803885|ref|ZP_13359501.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 35202]
 gi|418805630|ref|ZP_13361212.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 21550]
 gi|418809792|ref|ZP_13365341.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 22513]
 gi|418817880|ref|ZP_13373362.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 21538]
 gi|418823718|ref|ZP_13379125.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 22425]
 gi|418833712|ref|ZP_13388630.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM N18486]
 gi|418838050|ref|ZP_13392905.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM N1543]
 gi|418841636|ref|ZP_13396454.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 21554]
 gi|418846612|ref|ZP_13401380.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 19443]
 gi|418851349|ref|ZP_13406062.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 37978]
 gi|418856356|ref|ZP_13411002.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 19593]
 gi|418865541|ref|ZP_13420018.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 19536]
 gi|418865981|ref|ZP_13420446.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 4176]
 gi|419786445|ref|ZP_14312172.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. Levine 1]
 gi|419792847|ref|ZP_14318477.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. Levine 15]
 gi|421887443|ref|ZP_16318600.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Senftenberg str. SS209]
 gi|437829716|ref|ZP_20844238.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. SARB17]
 gi|440766164|ref|ZP_20945163.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Agona str. SH08SF124]
 gi|445141004|ref|ZP_21385209.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Dublin str. SL1438]
 gi|445157178|ref|ZP_21392909.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Dublin str. HWS51]
 gi|452123537|ref|YP_007473785.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Javiana str. CFSAN001992]
 gi|56128884|gb|AAV78390.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|62128866|gb|AAX66569.1| ATP-dependent protease, Hsp 100, part of novel multi-chaperone
           system with DnaK, DnaJ, and GrpE [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|194401944|gb|ACF62166.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194459233|gb|EDX48072.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194711949|gb|ACF91170.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195633279|gb|EDX51693.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197095031|emb|CAR60577.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|197212388|gb|ACH49785.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197937776|gb|ACH75109.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|199605153|gb|EDZ03698.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|204321133|gb|EDZ06333.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|205341135|gb|EDZ27899.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|205349068|gb|EDZ35699.1| chaperone protein clpB [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|224469040|gb|ACN46870.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|320087093|emb|CBY96861.1| Chaperone protein clpB 2 [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|322614490|gb|EFY11421.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322621445|gb|EFY18298.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322624306|gb|EFY21139.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629395|gb|EFY26173.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322633635|gb|EFY30377.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322638322|gb|EFY35020.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322639760|gb|EFY36443.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322647378|gb|EFY43874.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650452|gb|EFY46862.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322656055|gb|EFY52355.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322661449|gb|EFY57674.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322662649|gb|EFY58857.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322667022|gb|EFY63197.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322671391|gb|EFY67514.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322677602|gb|EFY73665.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322681572|gb|EFY77602.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322683972|gb|EFY79982.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|322715719|gb|EFZ07290.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SCSA50]
 gi|323195541|gb|EFZ80719.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323197914|gb|EFZ83037.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323203092|gb|EFZ88124.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323210517|gb|EFZ95401.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323218202|gb|EGA02914.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323221532|gb|EGA05945.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323230965|gb|EGA15083.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323234683|gb|EGA18769.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323238722|gb|EGA22772.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323241421|gb|EGA25452.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323246881|gb|EGA30848.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323253280|gb|EGA37110.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323257076|gb|EGA40785.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323260451|gb|EGA44062.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323264492|gb|EGA47998.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269627|gb|EGA53080.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|326624427|gb|EGE30772.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Dublin str. SD3246]
 gi|363553272|gb|EHL37528.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. SARB31]
 gi|363556032|gb|EHL40250.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. LQC 10]
 gi|363564474|gb|EHL48522.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. ATCC BAA710]
 gi|363569331|gb|EHL53293.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. SARB30]
 gi|363569941|gb|EHL53886.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 29N]
 gi|363571863|gb|EHL55763.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 42N]
 gi|363572447|gb|EHL56339.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 4441 H]
 gi|366054678|gb|EHN19026.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. CT_02035318]
 gi|366055874|gb|EHN20208.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. CT_02035278]
 gi|366064955|gb|EHN29152.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 80959-06]
 gi|366068546|gb|EHN32686.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. CT_02035320]
 gi|366069829|gb|EHN33950.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. CT_02035321]
 gi|366076744|gb|EHN40780.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. CT_02035327]
 gi|366830316|gb|EHN57188.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|372207197|gb|EHP20697.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008286]
 gi|379982933|emb|CCF90873.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Senftenberg str. SS209]
 gi|392618124|gb|EIX00536.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. Levine 15]
 gi|392621684|gb|EIX04034.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. Levine 1]
 gi|392730160|gb|EIZ87410.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 21539]
 gi|392738004|gb|EIZ95154.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 35199]
 gi|392742866|gb|EIZ99943.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 35185]
 gi|392750562|gb|EJA07524.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 35188]
 gi|392751172|gb|EJA08127.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 33953]
 gi|392759168|gb|EJA16024.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 19447]
 gi|392759665|gb|EJA16513.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 21559]
 gi|392767929|gb|EJA24689.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 19567]
 gi|392770497|gb|EJA27223.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 19449]
 gi|392772233|gb|EJA28936.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 35202]
 gi|392783589|gb|EJA40207.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 22513]
 gi|392784383|gb|EJA40984.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 21550]
 gi|392785709|gb|EJA42280.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 22425]
 gi|392786838|gb|EJA43387.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 21538]
 gi|392794914|gb|EJA51300.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM N18486]
 gi|392797356|gb|EJA53673.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM N1543]
 gi|392808313|gb|EJA64364.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 21554]
 gi|392810065|gb|EJA66091.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 19443]
 gi|392817795|gb|EJA73699.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 37978]
 gi|392819681|gb|EJA75539.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 19593]
 gi|392827764|gb|EJA83465.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 19536]
 gi|392840829|gb|EJA96363.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Newport str. CVM 4176]
 gi|435303916|gb|ELO79738.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. SARB17]
 gi|436423564|gb|ELP21374.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Agona str. SH08SF124]
 gi|444846612|gb|ELX71773.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Dublin str. HWS51]
 gi|444851725|gb|ELX76812.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Dublin str. SL1438]
 gi|451912541|gb|AGF84347.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Javiana str. CFSAN001992]
          Length = 857

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSANGYDPVYGAR 815


>gi|343506630|ref|ZP_08744105.1| hypothetical protein VII00023_03653 [Vibrio ichthyoenteri ATCC
           700023]
 gi|342802147|gb|EGU37589.1| hypothetical protein VII00023_03653 [Vibrio ichthyoenteri ATCC
           700023]
          Length = 857

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/622 (58%), Positives = 500/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  + ++I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELSKEEGNVILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKD A ERRFQK++V+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RKYMEKDPALERRFQKVIVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALINEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E  +A L+++W  EK  +  +Q IK E+E+ R+ +  A R  D   +S
Sbjct: 440 RLEMLNNELQEKERDFAELDEVWNAEKAALSGTQHIKSELEQARMDMEFARRAGDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIA+++S+ TGIPV+K+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDVEIADVLSKQTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  VSNAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEQVLHKRVIGQKEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLATFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFNTLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM  V  +FRPEF+NR+D+ +VF  L +++I SIA IQL  L  ++ +    +
Sbjct: 734 YQGIKHEVMEVVNKHFRPEFLNRVDESVVFHPLGQEHIKSIAAIQLLRLAKRMEERGYHM 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S+ AL  I+ +GFD +YGAR
Sbjct: 794 EVSEKALDLIAQVGFDPVYGAR 815


>gi|293411983|ref|ZP_06654706.1| ATP-dependent chaperone ClpB [Escherichia coli B354]
 gi|291468754|gb|EFF11245.1| ATP-dependent chaperone ClpB [Escherichia coli B354]
          Length = 861

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 264 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 324 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 384 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 444 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 504 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 558 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 618 LCKALANFMFDSDEAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 738 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 797

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 798 HISDEALKLLSENGYDPVYGAR 819


>gi|440771618|ref|ZP_20950532.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Agona str. SH10GFN094]
 gi|436420859|gb|ELP18714.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Agona str. SH10GFN094]
          Length = 857

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D IYGAR
Sbjct: 794 HISDEALKLLSANGYDPIYGAR 815


>gi|15803116|ref|NP_289147.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
           EDL933]
 gi|26248955|ref|NP_754995.1| protein disaggregation chaperone [Escherichia coli CFT073]
 gi|227888159|ref|ZP_04005964.1| endopeptidase Clp [Escherichia coli 83972]
 gi|291283865|ref|YP_003500683.1| heat shock protein [Escherichia coli O55:H7 str. CB9615]
 gi|293406102|ref|ZP_06650028.1| disaggregation chaperone [Escherichia coli FVEC1412]
 gi|293415865|ref|ZP_06658505.1| ATP-dependent chaperone ClpB [Escherichia coli B185]
 gi|293448944|ref|ZP_06663365.1| ATP-dependent chaperone ClpB [Escherichia coli B088]
 gi|298381834|ref|ZP_06991431.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Escherichia
           coli FVEC1302]
 gi|300819934|ref|ZP_07100117.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 107-1]
 gi|300900222|ref|ZP_07118408.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 198-1]
 gi|300905088|ref|ZP_07122895.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 84-1]
 gi|300921136|ref|ZP_07137517.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 115-1]
 gi|300922524|ref|ZP_07138633.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 182-1]
 gi|300930683|ref|ZP_07146067.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 187-1]
 gi|300940371|ref|ZP_07154959.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 21-1]
 gi|300948986|ref|ZP_07163042.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 116-1]
 gi|300957375|ref|ZP_07169592.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 175-1]
 gi|300976570|ref|ZP_07173522.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 200-1]
 gi|300986851|ref|ZP_07177834.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 45-1]
 gi|301026352|ref|ZP_07189800.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 69-1]
 gi|301050461|ref|ZP_07197343.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 185-1]
 gi|301305762|ref|ZP_07211849.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 124-1]
 gi|301326708|ref|ZP_07220026.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 78-1]
 gi|301644034|ref|ZP_07244052.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 146-1]
 gi|309794105|ref|ZP_07688529.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 145-7]
 gi|331643309|ref|ZP_08344440.1| ATP-dependent chaperone protein ClpB [Escherichia coli H736]
 gi|331648336|ref|ZP_08349424.1| ATP-dependent chaperone protein ClpB [Escherichia coli M605]
 gi|331678586|ref|ZP_08379260.1| ATP-dependent chaperone protein ClpB [Escherichia coli H591]
 gi|332280712|ref|ZP_08393125.1| heat shock protein [Shigella sp. D9]
 gi|386630361|ref|YP_006150081.1| protein disaggregation chaperone [Escherichia coli str. 'clone D
           i2']
 gi|386635281|ref|YP_006155000.1| protein disaggregation chaperone [Escherichia coli str. 'clone D
           i14']
 gi|387883785|ref|YP_006314087.1| protein disaggregation chaperone [Escherichia coli Xuzhou21]
 gi|415866944|ref|ZP_11539240.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 85-1]
 gi|415877635|ref|ZP_11543747.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 79-10]
 gi|422355470|ref|ZP_16436185.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 117-3]
 gi|422366379|ref|ZP_16446851.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 153-1]
 gi|422376237|ref|ZP_16456489.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 60-1]
 gi|422382964|ref|ZP_16463116.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 57-2]
 gi|25289895|pir||E85905 heat shock protein [imported] - Escherichia coli (strain O157:H7,
           substrain EDL933)
 gi|12517013|gb|AAG57705.1|AE005489_4 heat shock protein [Escherichia coli O157:H7 str. EDL933]
 gi|26109361|gb|AAN81563.1|AE016764_245 ClpB protein [Escherichia coli CFT073]
 gi|209762698|gb|ACI79661.1| heat shock protein [Escherichia coli]
 gi|209762700|gb|ACI79662.1| heat shock protein [Escherichia coli]
 gi|209762702|gb|ACI79663.1| heat shock protein [Escherichia coli]
 gi|209762704|gb|ACI79664.1| heat shock protein [Escherichia coli]
 gi|209762706|gb|ACI79665.1| heat shock protein [Escherichia coli]
 gi|227834799|gb|EEJ45265.1| endopeptidase Clp [Escherichia coli 83972]
 gi|290763738|gb|ADD57699.1| Heat shock protein [Escherichia coli O55:H7 str. CB9615]
 gi|291322034|gb|EFE61463.1| ATP-dependent chaperone ClpB [Escherichia coli B088]
 gi|291426108|gb|EFE99140.1| disaggregation chaperone [Escherichia coli FVEC1412]
 gi|291432054|gb|EFF05036.1| ATP-dependent chaperone ClpB [Escherichia coli B185]
 gi|298276974|gb|EFI18490.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Escherichia
           coli FVEC1302]
 gi|300297832|gb|EFJ54217.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 185-1]
 gi|300308512|gb|EFJ63032.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 200-1]
 gi|300315878|gb|EFJ65662.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 175-1]
 gi|300356257|gb|EFJ72127.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 198-1]
 gi|300395567|gb|EFJ79105.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 69-1]
 gi|300403015|gb|EFJ86553.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 84-1]
 gi|300407861|gb|EFJ91399.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 45-1]
 gi|300411909|gb|EFJ95219.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 115-1]
 gi|300421136|gb|EFK04447.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 182-1]
 gi|300451543|gb|EFK15163.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 116-1]
 gi|300454825|gb|EFK18318.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 21-1]
 gi|300461457|gb|EFK24950.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 187-1]
 gi|300527522|gb|EFK48584.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 107-1]
 gi|300839016|gb|EFK66776.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 124-1]
 gi|300846631|gb|EFK74391.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 78-1]
 gi|301077608|gb|EFK92414.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 146-1]
 gi|308122010|gb|EFO59272.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 145-7]
 gi|315253120|gb|EFU33088.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 85-1]
 gi|315290939|gb|EFU50304.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 153-1]
 gi|324005832|gb|EGB75051.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 57-2]
 gi|324012458|gb|EGB81677.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 60-1]
 gi|324016581|gb|EGB85800.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 117-3]
 gi|331036780|gb|EGI09004.1| ATP-dependent chaperone protein ClpB [Escherichia coli H736]
 gi|331042083|gb|EGI14225.1| ATP-dependent chaperone protein ClpB [Escherichia coli M605]
 gi|331073416|gb|EGI44737.1| ATP-dependent chaperone protein ClpB [Escherichia coli H591]
 gi|332103064|gb|EGJ06410.1| heat shock protein [Shigella sp. D9]
 gi|342927877|gb|EGU96599.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 79-10]
 gi|355421260|gb|AER85457.1| protein disaggregation chaperone [Escherichia coli str. 'clone D
           i2']
 gi|355426180|gb|AER90376.1| protein disaggregation chaperone [Escherichia coli str. 'clone D
           i14']
 gi|386797243|gb|AFJ30277.1| protein disaggregation chaperone [Escherichia coli Xuzhou21]
          Length = 861

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 264 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 324 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 384 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 444 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 504 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 558 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 618 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 738 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 797

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 798 HISDEALKLLSENGYDPVYGAR 819


>gi|406941815|gb|EKD74201.1| hypothetical protein ACD_45C00035G0005 [uncultured bacterium]
          Length = 862

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/622 (59%), Positives = 503/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLQDKRLLALDLGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQY+EKDAA ERRFQ+ILV+EP + +TI+ILRGL+++YE+HHGVE+TD A+VAA+ LS+R
Sbjct: 320 RQYVEKDAALERRFQRILVDEPSVPDTIAILRGLKERYELHHGVEMTDSALVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D L+R+++QLKIE EA+K+E D++SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAASNIRMEIDSKPEELDNLDRKIVQLKIEREALKKETDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++K++ K + +   LE IWK EK+ ++ +Q IK E+E+ RL+   A R  D   ++
Sbjct: 440 RLEKLEKDLQKWQSESDKLESIWKSEKSALQGAQTIKGELERARLEFETARRAGDLTRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   S  + Q      +  LL++KV  EEIAE+VS+ T IPV+K+++
Sbjct: 500 ELQYGQIPELEKKLATASLAEKQ------ETQLLRSKVTEEEIAEVVSKWTHIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E+ L KR++GQ +A++A+ NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEKEKLLKMEDALHKRIIGQSQAVTAICNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+A +F+ EE+++RIDMSEF+EKH+++RL+GAPPGY+GYEEGGYLTE+VRRKPYS+
Sbjct: 614 LCKALAAFLFDTEEAVVRIDMSEFMEKHAVARLVGAPPGYVGYEEGGYLTELVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGD 552
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD+ GRT++FRNTIIVMTSNLGS+ I+++ + GD
Sbjct: 674 VLLDEMEKAHHDVFNILLQVLDDGRLTDSHGRTVDFRNTIIVMTSNLGSELIQDIAQHGD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K AV+  V  +FRPEF+NRID+ +VF  L+++ I  IA+IQ   L+ +L +    L
Sbjct: 734 YFEMKNAVLKVVGQHFRPEFMNRIDETVVFHPLDKEQIKDIADIQFQRLRMRLAEKEYGL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            ++  AL  +++ G+D +YGAR
Sbjct: 794 TVTNEALDYLASTGYDPVYGAR 815


>gi|207858010|ref|YP_002244661.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|378956364|ref|YP_005213851.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
           enterica serovar Gallinarum/pullorum str. RKS5078]
 gi|421360375|ref|ZP_15810657.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 622731-39]
 gi|421361704|ref|ZP_15811961.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 639016-6]
 gi|421369377|ref|ZP_15819552.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 640631]
 gi|421370962|ref|ZP_15821123.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 77-0424]
 gi|421378529|ref|ZP_15828613.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 607307-6]
 gi|421383159|ref|ZP_15833201.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 485549-17]
 gi|421386614|ref|ZP_15836625.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 596866-22]
 gi|421389951|ref|ZP_15839927.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 596866-70]
 gi|421394229|ref|ZP_15844171.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 629164-26]
 gi|421400925|ref|ZP_15850806.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 629164-37]
 gi|421403251|ref|ZP_15853104.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 639672-46]
 gi|421410027|ref|ZP_15859812.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 639672-50]
 gi|421412138|ref|ZP_15861900.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 77-1427]
 gi|421415313|ref|ZP_15865041.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 77-2659]
 gi|421423252|ref|ZP_15872912.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 78-1757]
 gi|421427902|ref|ZP_15877520.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 22510-1]
 gi|421430574|ref|ZP_15880160.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 8b-1]
 gi|421433808|ref|ZP_15883365.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648905 5-18]
 gi|421440416|ref|ZP_15889896.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648901 6-18]
 gi|421444185|ref|ZP_15893623.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 50-3079]
 gi|436611647|ref|ZP_20513921.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 22704]
 gi|436798555|ref|ZP_20523439.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CHS44]
 gi|436810228|ref|ZP_20529335.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1882]
 gi|436812334|ref|ZP_20530913.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1884]
 gi|436832908|ref|ZP_20537198.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1594]
 gi|436852710|ref|ZP_20542768.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1566]
 gi|436861467|ref|ZP_20548651.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1580]
 gi|436862274|ref|ZP_20549069.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1543]
 gi|436872649|ref|ZP_20555531.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1441]
 gi|436882986|ref|ZP_20561570.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1810]
 gi|436891271|ref|ZP_20565971.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1558]
 gi|436897935|ref|ZP_20570103.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1018]
 gi|436903329|ref|ZP_20573793.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1010]
 gi|436914583|ref|ZP_20579430.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1729]
 gi|436919284|ref|ZP_20582065.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_0895]
 gi|436923294|ref|ZP_20585134.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_0899]
 gi|436938811|ref|ZP_20593598.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1457]
 gi|436944521|ref|ZP_20596968.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1747]
 gi|436948206|ref|ZP_20598478.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_0968]
 gi|436960075|ref|ZP_20604146.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1444]
 gi|436973706|ref|ZP_20610830.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1445]
 gi|436985723|ref|ZP_20615173.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1559]
 gi|436998540|ref|ZP_20620023.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1565]
 gi|437010458|ref|ZP_20624268.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1808]
 gi|437015822|ref|ZP_20625967.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1811]
 gi|437027158|ref|ZP_20630047.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_0956]
 gi|437043329|ref|ZP_20636842.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1455]
 gi|437053314|ref|ZP_20642429.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1575]
 gi|437062236|ref|ZP_20647602.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1725]
 gi|437067153|ref|ZP_20650215.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1745]
 gi|437078303|ref|ZP_20656000.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1791]
 gi|437085710|ref|ZP_20660261.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1795]
 gi|437096519|ref|ZP_20664876.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 576709]
 gi|437115753|ref|ZP_20669509.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 635290-58]
 gi|437118290|ref|ZP_20670257.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 607308-16]
 gi|437132350|ref|ZP_20677874.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 607308-19]
 gi|437140770|ref|ZP_20682744.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 607307-2]
 gi|437148596|ref|ZP_20687651.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 607308-9]
 gi|437155766|ref|ZP_20691984.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 629163]
 gi|437163186|ref|ZP_20696495.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. SE15-1]
 gi|437168948|ref|ZP_20699386.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CVM_N202]
 gi|437179490|ref|ZP_20705405.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CVM_56-3991]
 gi|437188751|ref|ZP_20710546.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CVM_76-3618]
 gi|437263399|ref|ZP_20719573.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CVM_81-2490]
 gi|437269919|ref|ZP_20723088.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. SL909]
 gi|437273894|ref|ZP_20724987.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. SL913]
 gi|437302718|ref|ZP_20733644.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CVM_69-4941]
 gi|437315526|ref|ZP_20737214.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 638970-15]
 gi|437327398|ref|ZP_20740340.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 17927]
 gi|437342506|ref|ZP_20745414.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CHS4]
 gi|437411738|ref|ZP_20752916.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 543463 22-17]
 gi|437443261|ref|ZP_20758006.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 543463 40-18]
 gi|437467132|ref|ZP_20764352.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 561362 1-1]
 gi|437475832|ref|ZP_20766909.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 642044 4-1]
 gi|437495015|ref|ZP_20772615.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 642046 4-7]
 gi|437503209|ref|ZP_20774826.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648898 4-5]
 gi|437542120|ref|ZP_20782544.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648899 3-17]
 gi|437555930|ref|ZP_20784897.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648900 1-16]
 gi|437579134|ref|ZP_20791659.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648901 1-17]
 gi|437586610|ref|ZP_20793465.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648901 39-2]
 gi|437608524|ref|ZP_20800713.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648902 6-8]
 gi|437624017|ref|ZP_20805185.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648903 1-6]
 gi|437650000|ref|ZP_20809637.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648904 3-6]
 gi|437662975|ref|ZP_20813696.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 653049 13-19]
 gi|437677959|ref|ZP_20817450.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 642044 8-1]
 gi|437690912|ref|ZP_20820543.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 561362 9-7]
 gi|437714417|ref|ZP_20827651.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 543463 42-20]
 gi|437794804|ref|ZP_20837444.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 76-2651]
 gi|437801405|ref|ZP_20838137.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 33944]
 gi|437965280|ref|ZP_20852572.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 50-5646]
 gi|438094745|ref|ZP_20861700.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 81-2625]
 gi|438104522|ref|ZP_20865879.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 62-1976]
 gi|438111003|ref|ZP_20868291.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 53-407]
 gi|438148248|ref|ZP_20876294.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Pullorum str. ATCC 9120]
 gi|445171861|ref|ZP_21396270.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. SE8a]
 gi|445183346|ref|ZP_21398674.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 20037]
 gi|445228312|ref|ZP_21404655.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. SE10]
 gi|445327269|ref|ZP_21412731.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 18569]
 gi|445348332|ref|ZP_21419617.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 13-1]
 gi|445354827|ref|ZP_21421632.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. PT23]
 gi|206709813|emb|CAR34165.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|357206975|gb|AET55021.1| ClpB protein (heat shock protein f84.1) [Salmonella enterica subsp.
           enterica serovar Gallinarum/pullorum str. RKS5078]
 gi|395981500|gb|EJH90721.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 640631]
 gi|395982460|gb|EJH91668.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 622731-39]
 gi|395992138|gb|EJI01257.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 639016-6]
 gi|395996258|gb|EJI05310.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 607307-6]
 gi|395996388|gb|EJI05439.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 485549-17]
 gi|396005582|gb|EJI14560.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 77-0424]
 gi|396012437|gb|EJI21334.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 596866-22]
 gi|396015010|gb|EJI23893.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 596866-70]
 gi|396015555|gb|EJI24429.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 629164-26]
 gi|396021759|gb|EJI30574.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 629164-37]
 gi|396022904|gb|EJI31707.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 639672-50]
 gi|396029199|gb|EJI37937.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 639672-46]
 gi|396037731|gb|EJI46377.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 78-1757]
 gi|396043381|gb|EJI51984.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 77-1427]
 gi|396048102|gb|EJI56664.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 77-2659]
 gi|396050475|gb|EJI58999.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 22510-1]
 gi|396054400|gb|EJI62892.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 8b-1]
 gi|396061471|gb|EJI69896.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648905 5-18]
 gi|396068551|gb|EJI76899.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648901 6-18]
 gi|396068934|gb|EJI77279.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 50-3079]
 gi|434938293|gb|ELL45288.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Pullorum str. ATCC 9120]
 gi|434960435|gb|ELL53814.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CHS44]
 gi|434965476|gb|ELL58417.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1882]
 gi|434969476|gb|ELL62180.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 22704]
 gi|434976430|gb|ELL68666.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1884]
 gi|434981507|gb|ELL73394.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1594]
 gi|434984643|gb|ELL76371.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1566]
 gi|434985911|gb|ELL77598.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1580]
 gi|434999274|gb|ELL90471.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1543]
 gi|434999506|gb|ELL90680.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1441]
 gi|435002972|gb|ELL94017.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1810]
 gi|435005400|gb|ELL96320.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1558]
 gi|435014066|gb|ELM04676.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1018]
 gi|435019759|gb|ELM10203.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1010]
 gi|435022665|gb|ELM12961.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1729]
 gi|435029119|gb|ELM19177.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_0895]
 gi|435034335|gb|ELM24225.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1457]
 gi|435039526|gb|ELM29296.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1747]
 gi|435041922|gb|ELM31655.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_0899]
 gi|435053115|gb|ELM42569.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1444]
 gi|435053339|gb|ELM42791.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1445]
 gi|435056264|gb|ELM45655.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_0968]
 gi|435061294|gb|ELM50523.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1565]
 gi|435061936|gb|ELM51132.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1559]
 gi|435066629|gb|ELM55708.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1808]
 gi|435083249|gb|ELM71854.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1811]
 gi|435083979|gb|ELM72580.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1455]
 gi|435085217|gb|ELM73770.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_0956]
 gi|435088720|gb|ELM77177.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1725]
 gi|435089445|gb|ELM77878.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1575]
 gi|435097959|gb|ELM86218.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1745]
 gi|435101703|gb|ELM89836.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1791]
 gi|435104396|gb|ELM92451.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CDC_2010K_1795]
 gi|435107420|gb|ELM95404.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 576709]
 gi|435114647|gb|ELN02440.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 635290-58]
 gi|435122620|gb|ELN10135.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 607308-19]
 gi|435129687|gb|ELN16975.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 607307-2]
 gi|435132008|gb|ELN19212.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 607308-9]
 gi|435133227|gb|ELN20407.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 607308-16]
 gi|435137798|gb|ELN24836.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 629163]
 gi|435142129|gb|ELN29046.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. SE15-1]
 gi|435149425|gb|ELN36121.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CVM_N202]
 gi|435150574|gb|ELN37239.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CVM_56-3991]
 gi|435155353|gb|ELN41901.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CVM_76-3618]
 gi|435160853|gb|ELN47097.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CVM_81-2490]
 gi|435171755|gb|ELN57318.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. SL909]
 gi|435177017|gb|ELN62364.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. SL913]
 gi|435177884|gb|ELN63148.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CVM_69-4941]
 gi|435180002|gb|ELN65110.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 638970-15]
 gi|435191579|gb|ELN76135.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 17927]
 gi|435192908|gb|ELN77417.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. CHS4]
 gi|435204076|gb|ELN87791.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 543463 22-17]
 gi|435211052|gb|ELN94264.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 543463 40-18]
 gi|435215781|gb|ELN98265.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 561362 1-1]
 gi|435222977|gb|ELO05024.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 642044 4-1]
 gi|435226964|gb|ELO08501.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 642046 4-7]
 gi|435235713|gb|ELO16496.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648899 3-17]
 gi|435237204|gb|ELO17903.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648898 4-5]
 gi|435241583|gb|ELO21929.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648901 1-17]
 gi|435242380|gb|ELO22691.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648900 1-16]
 gi|435252808|gb|ELO32316.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648902 6-8]
 gi|435254698|gb|ELO34082.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648903 1-6]
 gi|435259776|gb|ELO38990.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648901 39-2]
 gi|435267027|gb|ELO45751.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 653049 13-19]
 gi|435268272|gb|ELO46866.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 648904 3-6]
 gi|435274339|gb|ELO52455.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 642044 8-1]
 gi|435281395|gb|ELO59069.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 561362 9-7]
 gi|435286019|gb|ELO63360.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 543463 42-20]
 gi|435291842|gb|ELO68638.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 76-2651]
 gi|435304065|gb|ELO79876.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 33944]
 gi|435314312|gb|ELO87737.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 81-2625]
 gi|435322168|gb|ELO94486.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 62-1976]
 gi|435331518|gb|ELP02669.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 53-407]
 gi|435339920|gb|ELP08612.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 50-5646]
 gi|444861013|gb|ELX85908.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. SE8a]
 gi|444866249|gb|ELX90987.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. SE10]
 gi|444870831|gb|ELX95302.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 20037]
 gi|444876273|gb|ELY00452.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 13-1]
 gi|444880864|gb|ELY04927.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. 18569]
 gi|444887448|gb|ELY11148.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Enteritidis str. PT23]
          Length = 857

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSANGYDPVYGAR 815


>gi|418514455|ref|ZP_13080660.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Pomona str. ATCC 10729]
 gi|366079129|gb|EHN43118.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Pomona str. ATCC 10729]
          Length = 857

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHSRVIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSANGYDPVYGAR 815


>gi|323491099|ref|ZP_08096289.1| hypothetical protein VIBR0546_19649 [Vibrio brasiliensis LMG 20546]
 gi|323314646|gb|EGA67720.1| hypothetical protein VIBR0546_19649 [Vibrio brasiliensis LMG 20546]
          Length = 857

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRI+N EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIVNNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  + +II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELSKEEGNIILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK++V+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVIVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+D++S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALINEHDDASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+   E ++A LE++W  EK  +  +Q IK  +E+ R+ +  A R  D   +S
Sbjct: 440 RLTILNDELADKEREFAELEEVWNAEKAALSGTQHIKSALEQARMDMEFARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIA+++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIADVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E++L K V+GQ EA+  VSNAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEDVLHKCVIGQTEAVEVVSNAIRRSRAGLSDPNQPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLAKFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSTRIQENFGTVD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  VM+ V  +FRPEF+NR+D+ +VF  L + +I SIA+IQL  L  ++ +    L
Sbjct: 734 YQGMKDQVMDVVSKHFRPEFLNRVDESVVFHPLGKDHIKSIASIQLERLSKRMEEKGYSL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +S  AL  I+ +GFD +YGAR
Sbjct: 794 DVSDKALDLIAQVGFDPVYGAR 815


>gi|384082013|ref|ZP_09993188.1| ATP-dependent protease [gamma proteobacterium HIMB30]
          Length = 857

 Score =  786 bits (2029), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/634 (57%), Positives = 502/634 (79%), Gaps = 8/634 (1%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLA RI+NGEVP  L  K++L LD+  L+AG K+RGEFE+RLK
Sbjct: 200 NPVLIGEPGVGKTAIVEGLAARIVNGEVPEGLKGKRVLSLDMGSLIAGAKFRGEFEERLK 259

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +LKE++  +  II+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 260 AVLKELAQQEGQIILFIDEIHTMVGAGKSEGAMDAGNMLKPALARGELHCVGATTLDEYR 319

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           QY EKDAA ERRFQK+LV EP   +TI+ILRGL+ KYEVHHGVEI+D AI+AA++LS RY
Sbjct: 320 QYFEKDAALERRFQKVLVGEPTETDTIAILRGLKPKYEVHHGVEISDSAIIAAAKLSSRY 379

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DR +PDKAIDL+DEAA++I++E+DSKPE +D+L+RRLIQLKIE EA+K+E DE+SK R
Sbjct: 380 ITDRQLPDKAIDLMDEAASRIRLEMDSKPEELDRLDRRLIQLKIEREALKKEKDEASKAR 439

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L+ +++ I ++  + + LE++W  EK      Q IKEE+++  + + +A R  D   +S+
Sbjct: 440 LIELEETIAEVAKEASGLEEVWASEKAQTHGVQAIKEELDRAEIDLEQARRAGDLARMSE 499

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           ++YG +  L     EK   D Q  N +++  L++++V  EEIAE+VSR TGIPV+K+++ 
Sbjct: 500 IQYGVIPSL-----EKRMADAQEANESDEGKLVRSRVTEEEIAEVVSRWTGIPVAKMLEG 554

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           E++KLL +E+ L  RVVGQD A++AV+NA+RRSRSGLSD KRP GSF+FLGPTGVGKTEL
Sbjct: 555 EKDKLLQMEDALHARVVGQDTAVTAVANAVRRSRSGLSDPKRPNGSFLFLGPTGVGKTEL 614

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK+L+  +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYE+GGYLTE VRR+PY+++
Sbjct: 615 CKSLAEFLFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEQGGYLTEAVRRRPYAVV 674

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKE 554
           LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F N+++VMTSNLGSD I+ M     E
Sbjct: 675 LLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFSNSVVVMTSNLGSDLIQSMVGESHE 734

Query: 555 IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKI 614
            I+ AVM  V  +F+PEFINRIDD +VF  L R++I  I ++QL+ L+ +L ++    ++
Sbjct: 735 TIRDAVMGVVSTHFQPEFINRIDDAVVFHALGREHIRGILDVQLSYLRARLDELEYGFEL 794

Query: 615 SKAALKKISNIGFDLIYGARDVHGCKKSLSILLK 648
           +    +K+   G+D +YGAR +   K+++ + L+
Sbjct: 795 TDEVAEKLCEAGYDPVYGARPL---KRAIQVYLE 825


>gi|436751232|ref|ZP_20520160.1| protein disaggregation chaperone, partial [Salmonella enterica
           subsp. enterica serovar Enteritidis str. SE30663]
 gi|434970226|gb|ELL62855.1| protein disaggregation chaperone, partial [Salmonella enterica
           subsp. enterica serovar Enteritidis str. SE30663]
          Length = 855

 Score =  785 bits (2028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSANGYDPVYGAR 815


>gi|417541083|ref|ZP_12192911.1| ClpB protein [Salmonella enterica subsp. enterica serovar
           Wandsworth str. A4-580]
 gi|353661451|gb|EHD00773.1| ClpB protein [Salmonella enterica subsp. enterica serovar
           Wandsworth str. A4-580]
          Length = 820

 Score =  785 bits (2028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 163 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 222

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 223 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 282

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 283 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 342

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 343 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 402

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 403 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 462

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 463 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLE 516

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 517 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 576

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 577 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 636

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 637 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 696

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 697 YGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEI 756

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 757 HISDEALKLLSANGYDPVYGAR 778


>gi|423198677|ref|ZP_17185260.1| chaperone ClpB [Aeromonas hydrophila SSU]
 gi|404629867|gb|EKB26592.1| chaperone ClpB [Aeromonas hydrophila SSU]
          Length = 857

 Score =  785 bits (2028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/622 (59%), Positives = 502/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIG PGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGAPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDLAKEEGNVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+R
Sbjct: 320 RQFIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+K
Sbjct: 380 YIADRQLPDKAIDLIDEAAASIRLQIDSKPESLDRLERRIIQLKLEQQALMKEDDDASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI + + +Y  LE++WK EK  +  +Q IK  +E+ R  ++ A R  D   +S
Sbjct: 440 RLELINQEIGEKDREYNELEEVWKAEKAALAGTQHIKAALEQARQDLDVARRAGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + +LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEDQLHSRVIGQEEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ +++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALAEFLFDTQDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHHSEKD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  +M  +   FRPEFINRID+ +VF  L  ++I SIA IQL  L ++L     ++
Sbjct: 734 YNEMKAMLMEVLARSFRPEFINRIDETVVFHPLGEEHIKSIARIQLKSLMSRLEAQGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S+A L K+ + GFD +YGAR
Sbjct: 794 EVSEALLNKLVHAGFDPVYGAR 815


>gi|331658742|ref|ZP_08359684.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA206]
 gi|419912524|ref|ZP_14430975.1| protein disaggregation chaperone [Escherichia coli KD1]
 gi|432899701|ref|ZP_20110253.1| chaperone ClpB [Escherichia coli KTE192]
 gi|433029525|ref|ZP_20217380.1| chaperone ClpB [Escherichia coli KTE109]
 gi|331053324|gb|EGI25353.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA206]
 gi|388391521|gb|EIL52984.1| protein disaggregation chaperone [Escherichia coli KD1]
 gi|431425234|gb|ELH07305.1| chaperone ClpB [Escherichia coli KTE192]
 gi|431542333|gb|ELI17504.1| chaperone ClpB [Escherichia coli KTE109]
          Length = 857

 Score =  785 bits (2028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 499/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDEAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V++ V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YAHMKELVLDVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSENGYDPVYGAR 815


>gi|331654052|ref|ZP_08355052.1| ATP-dependent chaperone protein ClpB [Escherichia coli M718]
 gi|331047434|gb|EGI19511.1| ATP-dependent chaperone protein ClpB [Escherichia coli M718]
          Length = 861

 Score =  785 bits (2028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 264 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 324 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 384 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 444 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 504 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 558 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 618 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 738 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 797

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 798 HISDEALKLLSENGYDPVYGAR 819


>gi|300825131|ref|ZP_07105224.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 119-7]
 gi|300522403|gb|EFK43472.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 119-7]
          Length = 861

 Score =  785 bits (2028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 264 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 324 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 384 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 444 RLDMLNEELSDKEHQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 504 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 558 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 618 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 738 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 797

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 798 HISDEALKLLSENGYDPVYGAR 819


>gi|397164282|ref|ZP_10487739.1| ATP-dependent chaperone protein ClpB [Enterobacter radicincitans
           DSM 16656]
 gi|396094128|gb|EJI91681.1| ATP-dependent chaperone protein ClpB [Enterobacter radicincitans
           DSM 16656]
          Length = 857

 Score =  785 bits (2028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/655 (57%), Positives = 513/655 (78%), Gaps = 17/655 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E  A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQRALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+   E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ + +A R  D   +S
Sbjct: 440 RLEMLNEELEDKERQYSALEEEWKAEKASLSGTQTIKAELEQAKIAMEQARRNGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ +V   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQAE------GKTMRLLRNRVTDIEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L  RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEHDLHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKSLANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   GD 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQE-RFGDL 732

Query: 554 EI--IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           +   +K  VM  V   FRPEFINRID+++VF  L  K+I +IA IQL  L  +L +    
Sbjct: 733 DYGHMKELVMGVVSQSFRPEFINRIDEVVVFHPLGEKHIAAIAQIQLQRLYKRLEERGYA 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
           + IS  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+LI
Sbjct: 793 VTISDEALKLLSANGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839


>gi|410666026|ref|YP_006918397.1| ATP-dependent chaperone ClpB [Simiduia agarivorans SA1 = DSM 21679]
 gi|409028383|gb|AFV00668.1| ATP-dependent chaperone ClpB [Simiduia agarivorans SA1 = DSM 21679]
          Length = 858

 Score =  785 bits (2028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/624 (61%), Positives = 505/624 (80%), Gaps = 9/624 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  LLAG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRLLSLDLGSLLAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  II+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KNVLNELAKQEGRIILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV+ITD AI+AA++LS R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVDITDSAIIAAAKLSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE MD+LERRLIQLKIE EA+K++  E++KK
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEEMDRLERRLIQLKIEREAVKKDETEAAKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           +L L+  EI K+E +YA+LE+IW+ EK  +  SQ IK  +E+ RL +  A R  D   +S
Sbjct: 440 QLNLLDGEIEKVEREYADLEEIWRTEKAALSGSQDIKSSLEQARLDMEAARRAGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   SQ ++       +  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPELEKQLDMASQAEMM------EMKLLRNKVSDEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L K+V+GQ EA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMESALHKKVIGQTEAVIAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+  E+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTPEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGD 552
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT++VMTSNLGSD+I+++ E GD
Sbjct: 674 LLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVVMTSNLGSDRIQQLSEGGD 733

Query: 553 K--EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNM 610
              + IK +VM+ V  +FRPEFINRID+ +VF  L R+ I  IA +QL +L+ +L +  +
Sbjct: 734 ANYDAIKASVMDVVGQHFRPEFINRIDESVVFHPLGREQIRGIAELQLALLQRRLKEREL 793

Query: 611 DLKISKAALKKISNIGFDLIYGAR 634
            L +  A + K+   G+D +YGAR
Sbjct: 794 SLTLEDAVMDKVLAAGYDPVYGAR 817


>gi|304399169|ref|ZP_07381036.1| ATP-dependent chaperone ClpB [Pantoea sp. aB]
 gi|304353223|gb|EFM17603.1| ATP-dependent chaperone ClpB [Pantoea sp. aB]
          Length = 857

 Score =  785 bits (2028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/622 (59%), Positives = 496/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLSDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPGVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALKKEADDASIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ E+N+ E +YA LE  WK EK  +  +Q IK E+E+ RL + +A R+ D   +S
Sbjct: 440 RLEMLETELNQKEREYAELEDEWKTEKASLSGTQNIKAELEQARLNLEQARRQGDLAQMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L   +Q +           LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGKIPALEKQLAAATQAE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEQDLHGRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKSLANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E      
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQERFGNLS 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V  +FRPEF+NRID+++VF  L  K+I SIA IQL  L  +L +    L
Sbjct: 734 YPEMKDIVMGVVGQHFRPEFVNRIDEVVVFHPLAEKHIASIAQIQLQRLYKRLDERGYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  A+K ++  G+D +YGAR
Sbjct: 794 HISDDAIKLLAENGYDPVYGAR 815


>gi|429101412|ref|ZP_19163386.1| ClpB protein [Cronobacter turicensis 564]
 gi|426288061|emb|CCJ89499.1| ClpB protein [Cronobacter turicensis 564]
          Length = 857

 Score =  785 bits (2028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/622 (59%), Positives = 493/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNDELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L   +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPDLEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEEDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V   FRPEFINRID+++VF  L +++I SIA IQL  L  +L      +
Sbjct: 734 YASMKELVMGVVGQSFRPEFINRIDEVVVFHPLGQQHIASIAQIQLQRLYQRLEDRGYAM 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  AL+ +   G+D +YGAR
Sbjct: 794 HISDDALQLLGENGYDPVYGAR 815


>gi|415811834|ref|ZP_11504147.1| ATP-dependent chaperone ClpB [Escherichia coli LT-68]
 gi|417239377|ref|ZP_12036393.1| ATP-dependent chaperone protein ClpB [Escherichia coli 9.0111]
 gi|417278141|ref|ZP_12065457.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.2303]
 gi|417624590|ref|ZP_12274887.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_H.1.8]
 gi|417673475|ref|ZP_12322927.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 155-74]
 gi|417683458|ref|ZP_12332805.1| ATP-dependent chaperone ClpB [Shigella boydii 3594-74]
 gi|417829028|ref|ZP_12475576.1| ATP-dependent chaperone ClpB [Shigella flexneri J1713]
 gi|419166727|ref|ZP_13711175.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6E]
 gi|419216869|ref|ZP_13759866.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8D]
 gi|419224608|ref|ZP_13767506.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9A]
 gi|419266272|ref|ZP_13808641.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10C]
 gi|419303539|ref|ZP_13845514.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11C]
 gi|419350701|ref|ZP_13892036.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13B]
 gi|419356154|ref|ZP_13897407.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13C]
 gi|419361218|ref|ZP_13902434.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13D]
 gi|419366349|ref|ZP_13907507.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13E]
 gi|419813247|ref|ZP_14338100.1| protein disaggregation chaperone [Escherichia coli O32:H37 str. P4]
 gi|420348871|ref|ZP_14850253.1| ATP-dependent chaperone ClpB [Shigella boydii 965-58]
 gi|420361393|ref|ZP_14862332.1| ATP-dependent chaperone ClpB [Shigella sonnei 3226-85]
 gi|420381868|ref|ZP_14881308.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 225-75]
 gi|421683751|ref|ZP_16123542.1| ATP-dependent chaperone ClpB [Shigella flexneri 1485-80]
 gi|424533509|ref|ZP_17976866.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4422]
 gi|424540920|ref|ZP_17983849.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4013]
 gi|425111332|ref|ZP_18513257.1| ATP-dependent chaperone protein ClpB [Escherichia coli 6.0172]
 gi|425157267|ref|ZP_18556537.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA34]
 gi|425175429|ref|ZP_18573554.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA504]
 gi|425200975|ref|ZP_18597189.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE037]
 gi|425289734|ref|ZP_18680570.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3006]
 gi|425301446|ref|ZP_18691335.1| ATP-dependent chaperone protein ClpB [Escherichia coli 07798]
 gi|425318562|ref|ZP_18707358.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1736]
 gi|429015806|ref|ZP_19082708.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0943]
 gi|429027740|ref|ZP_19093752.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0427]
 gi|323173093|gb|EFZ58724.1| ATP-dependent chaperone ClpB [Escherichia coli LT-68]
 gi|332089246|gb|EGI94353.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 155-74]
 gi|332091986|gb|EGI97064.1| ATP-dependent chaperone ClpB [Shigella boydii 3594-74]
 gi|335574327|gb|EGM60653.1| ATP-dependent chaperone ClpB [Shigella flexneri J1713]
 gi|345376356|gb|EGX08294.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_H.1.8]
 gi|378006469|gb|EHV69452.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6E]
 gi|378060300|gb|EHW22496.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8D]
 gi|378084050|gb|EHW45977.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9A]
 gi|378115045|gb|EHW76594.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10C]
 gi|378143617|gb|EHX04808.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11C]
 gi|378199027|gb|EHX59495.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13C]
 gi|378199229|gb|EHX59695.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13B]
 gi|378202339|gb|EHX62777.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13D]
 gi|378211840|gb|EHX72173.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13E]
 gi|385153935|gb|EIF15958.1| protein disaggregation chaperone [Escherichia coli O32:H37 str. P4]
 gi|386213111|gb|EII23544.1| ATP-dependent chaperone protein ClpB [Escherichia coli 9.0111]
 gi|386239109|gb|EII76043.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.2303]
 gi|390860758|gb|EIP23050.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4422]
 gi|390862609|gb|EIP24785.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4013]
 gi|391267912|gb|EIQ26843.1| ATP-dependent chaperone ClpB [Shigella boydii 965-58]
 gi|391277116|gb|EIQ35872.1| ATP-dependent chaperone ClpB [Shigella sonnei 3226-85]
 gi|391299375|gb|EIQ57339.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 225-75]
 gi|404337631|gb|EJZ64082.1| ATP-dependent chaperone ClpB [Shigella flexneri 1485-80]
 gi|408069291|gb|EKH03682.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA34]
 gi|408090876|gb|EKH24129.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA504]
 gi|408114538|gb|EKH46076.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE037]
 gi|408212539|gb|EKI37061.1| ATP-dependent chaperone protein ClpB [Escherichia coli 07798]
 gi|408212633|gb|EKI37150.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3006]
 gi|408237828|gb|EKI60673.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1736]
 gi|408550250|gb|EKK27588.1| ATP-dependent chaperone protein ClpB [Escherichia coli 6.0172]
 gi|427260741|gb|EKW26705.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0943]
 gi|427278327|gb|EKW42792.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0427]
          Length = 798

 Score =  785 bits (2028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/654 (57%), Positives = 513/654 (78%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 141 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 200

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 201 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 260

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 261 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 320

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 321 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 380

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 381 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 440

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 441 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 494

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 495 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 554

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 555 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 614

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 615 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 674

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 675 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 734

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            IS  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+L+
Sbjct: 735 HISDEALKLLSENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELV 780


>gi|90022193|ref|YP_528020.1| ClpB protein [Saccharophagus degradans 2-40]
 gi|89951793|gb|ABD81808.1| ATPase AAA-2 [Saccharophagus degradans 2-40]
          Length = 876

 Score =  785 bits (2028), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 390/673 (57%), Positives = 521/673 (77%), Gaps = 34/673 (5%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  LLAG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRLLSLDLGSLLAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+F+DELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKQEGRIILFVDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V+EP+ E+TI+ILRGL+++YEVHHGV ITD AI+AA++LS R
Sbjct: 320 RQYIEKDAALERRFQKVQVDEPNEEDTIAILRGLKERYEVHHGVNITDSAIIAAAKLSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDE+A++I++EIDSKPE MDKLERRLIQLKIE EA+K++ D +SK+
Sbjct: 380 YITDRQLPDKAIDLIDESASRIRMEIDSKPEEMDKLERRLIQLKIEREAVKKDEDIASKE 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  I  +IN++E  +A+L++IW+ EK  ++ SQ+IK  +EK RL +  A R  D   +S
Sbjct: 440 RLKKIDSQINEIEKSFADLDEIWRAEKAALQGSQEIKSHLEKARLDLEAARRAGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L   +Q D+      ++  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPDLEKQLDMAAQADM------HEMKLLRNKVTEEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L KRV+GQ E++ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEDDLHKRVIGQHESVVAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSL
Sbjct: 614 LCKALAEFLFDSQDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM----- 548
           +LLDEIEKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT++VMTSNLGS  I+++     
Sbjct: 674 VLLDEIEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVVVMTSNLGSSAIQDIAQNKS 733

Query: 549 --------EKGDKE-------IIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSI 593
                   E G +E        +K AVM  V  +FRPEFINRID+ +VF  L ++ I  I
Sbjct: 734 FDTISFDNESGAEEQNQYRYQAMKDAVMEVVTGHFRPEFINRIDEAVVFHPLAQQQIAGI 793

Query: 594 ANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKK 653
           A+IQL  L+ +L + ++ L ++   + K++  GFD +YGAR +   K+++  L+     +
Sbjct: 794 ADIQLETLRKRLAERDLRLNVTPEVMAKLAEAGFDPVYGARPL---KRAIQQLV-----E 845

Query: 654 SPEANFIFLGDLI 666
           +P A  I  G+ I
Sbjct: 846 NPLAQHILKGEFI 858


>gi|419960229|ref|ZP_14476273.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
           cloacae GS1]
 gi|388604901|gb|EIM34127.1| protein disaggregation chaperone [Enterobacter cloacae subsp.
           cloacae GS1]
          Length = 857

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/622 (59%), Positives = 499/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALNKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+++ E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELDEKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+      Q +I   +      LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEK------QLEIATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQDLHQRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 734 YSHMKDLVLGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDDALKLLSENGYDPVYGAR 815


>gi|432466777|ref|ZP_19708864.1| chaperone ClpB [Escherichia coli KTE205]
 gi|432582290|ref|ZP_19818703.1| chaperone ClpB [Escherichia coli KTE57]
 gi|433073818|ref|ZP_20260468.1| chaperone ClpB [Escherichia coli KTE129]
 gi|433121149|ref|ZP_20306817.1| chaperone ClpB [Escherichia coli KTE157]
 gi|433184293|ref|ZP_20368537.1| chaperone ClpB [Escherichia coli KTE85]
 gi|430993060|gb|ELD09419.1| chaperone ClpB [Escherichia coli KTE205]
 gi|431121701|gb|ELE24580.1| chaperone ClpB [Escherichia coli KTE57]
 gi|431586710|gb|ELI58097.1| chaperone ClpB [Escherichia coli KTE129]
 gi|431641475|gb|ELJ09213.1| chaperone ClpB [Escherichia coli KTE157]
 gi|431705027|gb|ELJ69647.1| chaperone ClpB [Escherichia coli KTE85]
          Length = 857

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 499/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V++ V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YAHMKELVLDVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSENGYDPVYGAR 815


>gi|390437342|ref|ZP_10225880.1| protein disaggregation chaperone [Pantoea agglomerans IG1]
          Length = 857

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/622 (59%), Positives = 495/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLSDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALKKEADDASIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ E+N+ E +YA LE  WK EK  +  +Q IK E+E+ RL + +A R+ D   +S
Sbjct: 440 RLEMLETELNQKEREYAELEDEWKTEKASLSGTQNIKAELEQARLNLEQARRQGDLAQMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L   +Q +           LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGKIPALEKQLAAATQAE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEQDLHGRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E      
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQERFGNLS 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V  +FRPEF+NRID+++VF  L  K+I SIA IQL  L  +L +    L
Sbjct: 734 YPEMKDIVMGVVGQHFRPEFVNRIDEVVVFHPLAEKHIASIAQIQLQRLYKRLDERGYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  A+K ++  G+D +YGAR
Sbjct: 794 HISDDAIKLLAENGYDPVYGAR 815


>gi|417744471|ref|ZP_12392995.1| ATP-dependent chaperone ClpB [Shigella flexneri 2930-71]
 gi|420342987|ref|ZP_14844456.1| ATP-dependent chaperone ClpB [Shigella flexneri K-404]
 gi|420374583|ref|ZP_14874550.1| ATP-dependent chaperone ClpB [Shigella flexneri 1235-66]
 gi|332765573|gb|EGJ95786.1| ATP-dependent chaperone ClpB [Shigella flexneri 2930-71]
 gi|391264802|gb|EIQ23787.1| ATP-dependent chaperone ClpB [Shigella flexneri K-404]
 gi|391316101|gb|EIQ73582.1| ATP-dependent chaperone ClpB [Shigella flexneri 1235-66]
          Length = 798

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/654 (57%), Positives = 513/654 (78%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 141 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 200

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 201 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 260

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 261 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 320

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 321 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 380

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 381 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 440

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 441 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 494

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 495 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 554

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 555 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 614

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 615 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 674

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 675 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 734

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            IS  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+L+
Sbjct: 735 HISDEALKLLSENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELV 780


>gi|372275030|ref|ZP_09511066.1| protein disaggregation chaperone [Pantoea sp. SL1_M5]
          Length = 857

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/622 (59%), Positives = 495/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLSDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALKKEADDASIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ E+N+ E +YA LE  WK EK  +  +Q IK E+E+ RL + +A R+ D   +S
Sbjct: 440 RLEMLETELNQKEREYAELEDEWKTEKASLSGTQNIKAELEQARLNLEQARRQGDLAQMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L   +Q +           LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGKIPALEKQLAAATQAE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEQDLHGRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E      
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQERFGNLS 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V  +FRPEF+NRID+++VF  L  K+I SIA IQL  L  +L +    L
Sbjct: 734 YPEMKDIVMGVVGQHFRPEFVNRIDEVVVFHPLAEKHIASIAQIQLQRLYKRLDERGYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  A+K ++  G+D +YGAR
Sbjct: 794 HISDDAIKLLAENGYDPVYGAR 815


>gi|222157291|ref|YP_002557430.1| chaperone clpB [Escherichia coli LF82]
 gi|222034296|emb|CAP77037.1| chaperone clpB [Escherichia coli LF82]
          Length = 823

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 166 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 225

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 226 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 285

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 286 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 345

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 346 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 405

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 406 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 465

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 466 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 519

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 520 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 579

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 580 LCKALANFMFDSDEAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 639

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 640 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 699

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 700 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 759

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 760 HISDEALKLLSENGYDPVYGAR 781


>gi|422792066|ref|ZP_16844768.1| ATP-dependent chaperone ClpB [Escherichia coli TA007]
 gi|323971463|gb|EGB66699.1| ATP-dependent chaperone ClpB [Escherichia coli TA007]
          Length = 809

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/654 (57%), Positives = 513/654 (78%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 152 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 211

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 212 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 271

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 272 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 331

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 332 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 391

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 392 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 451

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 452 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 505

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 506 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 565

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 566 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 625

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 626 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 685

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 686 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 745

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            IS  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+L+
Sbjct: 746 HISDEALKLLSENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELV 791


>gi|312973164|ref|ZP_07787337.1| ATP-dependent chaperone ClpB [Escherichia coli 1827-70]
 gi|310333106|gb|EFQ00320.1| ATP-dependent chaperone ClpB [Escherichia coli 1827-70]
          Length = 798

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/654 (57%), Positives = 513/654 (78%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 141 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 200

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 201 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 260

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 261 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 320

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 321 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 380

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 381 RLDMLNEELSDKERQYSELEEEWKTEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 440

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 441 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 494

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 495 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 554

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 555 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 614

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 615 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 674

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 675 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 734

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            IS  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+L+
Sbjct: 735 HISDEALKLLSENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELV 780


>gi|417385010|ref|ZP_12150193.1| ClpB protein [Salmonella enterica subsp. enterica serovar
           Johannesburg str. S5-703]
 gi|353607067|gb|EHC61103.1| ClpB protein [Salmonella enterica subsp. enterica serovar
           Johannesburg str. S5-703]
          Length = 798

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 141 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 200

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 201 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 260

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 261 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 320

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 321 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 380

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 381 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 440

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 441 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 494

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 495 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 554

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 555 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 614

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 615 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 674

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 675 YGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEI 734

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 735 HISDEALKLLSANGYDPVYGAR 756


>gi|422970256|ref|ZP_16974049.1| chaperone ClpB [Escherichia coli TA124]
 gi|371600634|gb|EHN89406.1| chaperone ClpB [Escherichia coli TA124]
          Length = 857

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSENGYDPVYGAR 815


>gi|330831466|ref|YP_004394418.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Aeromonas
           veronii B565]
 gi|423211882|ref|ZP_17198415.1| chaperone ClpB [Aeromonas veronii AER397]
 gi|328806602|gb|AEB51801.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Aeromonas
           veronii B565]
 gi|404612683|gb|EKB09741.1| chaperone ClpB [Aeromonas veronii AER397]
          Length = 857

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/622 (58%), Positives = 504/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIG PGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGAPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 260 KAVLTDLAKEEGNVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+K
Sbjct: 380 YIADRQLPDKAIDLIDEAAASIRLQIDSKPEALDRLERRIIQLKLEQQALMKEDDDASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI + + +Y  L+++WK EK  +  +Q IK  +E+ R  ++ A R  D   +S
Sbjct: 440 RLELINQEIGEKDREYNELDEVWKAEKAALAGTQHIKAALEQARQDLDVARRAGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + +LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEDQLHSRVIGQEEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ +++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALAEFLFDTQDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQEHHSEKD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  +M+ +   FRPEFINRID+ +VF  L  ++I SIA IQL  L  +L     ++
Sbjct: 734 YDEMKAMLMDVLTRSFRPEFINRIDETVVFHPLGEEHIKSIARIQLKSLMGRLEAQGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S+A L+K+ + GFD +YGAR
Sbjct: 794 EVSEALLEKLVHAGFDPVYGAR 815


>gi|147365|gb|AAA24422.1| ATP-dependent protease binding subunit [Escherichia coli]
          Length = 857

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSENGYDPVYGAR 815


>gi|429105773|ref|ZP_19167642.1| ClpB protein [Cronobacter malonaticus 681]
 gi|429111337|ref|ZP_19173107.1| ClpB protein [Cronobacter malonaticus 507]
 gi|426292496|emb|CCJ93755.1| ClpB protein [Cronobacter malonaticus 681]
 gi|426312494|emb|CCJ99220.1| ClpB protein [Cronobacter malonaticus 507]
          Length = 857

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/622 (59%), Positives = 493/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+   E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNDELADKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V   FRPEFINRID+++VF  L +++I SIA IQL  L  +L      +
Sbjct: 734 YASMKELVMGVVGQSFRPEFINRIDEVVVFHPLGQQHIASIAQIQLQRLYQRLEDRGYAV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  AL+ +   G+D +YGAR
Sbjct: 794 HISDDALQLLGENGYDPVYGAR 815


>gi|423141231|ref|ZP_17128869.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
           houtenae str. ATCC BAA-1581]
 gi|379050403|gb|EHY68295.1| ATP-dependent chaperone protein ClpB [Salmonella enterica subsp.
           houtenae str. ATCC BAA-1581]
          Length = 823

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 166 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 225

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 226 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 285

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 286 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 345

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 346 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 405

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 406 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 465

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 466 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 519

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 520 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 579

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 580 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 639

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 640 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 699

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 700 YGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEI 759

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 760 HISDEALKLLSANGYDPVYGAR 781


>gi|432889814|ref|ZP_20102920.1| chaperone ClpB [Escherichia coli KTE165]
 gi|431433011|gb|ELH14685.1| chaperone ClpB [Escherichia coli KTE165]
          Length = 857

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSENGYDPVYGAR 815


>gi|366161829|ref|ZP_09461691.1| protein disaggregation chaperone [Escherichia sp. TW09308]
 gi|432373208|ref|ZP_19616246.1| chaperone ClpB [Escherichia coli KTE11]
 gi|430895214|gb|ELC17485.1| chaperone ClpB [Escherichia coli KTE11]
          Length = 857

 Score =  785 bits (2027), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YARMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSENGYDPVYGAR 815


>gi|432481938|ref|ZP_19723893.1| chaperone ClpB [Escherichia coli KTE210]
 gi|431006460|gb|ELD21466.1| chaperone ClpB [Escherichia coli KTE210]
          Length = 857

 Score =  785 bits (2026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSENGYDPVYGAR 815


>gi|432432832|ref|ZP_19675258.1| chaperone ClpB [Escherichia coli KTE187]
 gi|432845561|ref|ZP_20078344.1| chaperone ClpB [Escherichia coli KTE141]
 gi|433208716|ref|ZP_20392389.1| chaperone ClpB [Escherichia coli KTE97]
 gi|430951678|gb|ELC70893.1| chaperone ClpB [Escherichia coli KTE187]
 gi|431394006|gb|ELG77549.1| chaperone ClpB [Escherichia coli KTE141]
 gi|431729349|gb|ELJ92981.1| chaperone ClpB [Escherichia coli KTE97]
          Length = 857

 Score =  785 bits (2026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRMGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSENGYDPVYGAR 815


>gi|161615589|ref|YP_001589554.1| protein disaggregation chaperone [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161364953|gb|ABX68721.1| hypothetical protein SPAB_03370 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 820

 Score =  785 bits (2026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 163 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 222

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 223 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 282

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 283 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 342

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 343 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 402

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 403 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 462

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 463 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 516

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 517 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 576

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 577 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 636

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 637 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 696

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 697 YGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEI 756

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 757 HISDEALKLLSANGYDPVYGAR 778


>gi|331684248|ref|ZP_08384840.1| ATP-dependent chaperone protein ClpB [Escherichia coli H299]
 gi|387617905|ref|YP_006120927.1| protein disaggregation chaperone [Escherichia coli O83:H1 str. NRG
           857C]
 gi|450191583|ref|ZP_21891282.1| protein disaggregation chaperone [Escherichia coli SEPT362]
 gi|312947166|gb|ADR27993.1| protein disaggregation chaperone [Escherichia coli O83:H1 str. NRG
           857C]
 gi|331077863|gb|EGI49069.1| ATP-dependent chaperone protein ClpB [Escherichia coli H299]
 gi|449319227|gb|EMD09281.1| protein disaggregation chaperone [Escherichia coli SEPT362]
          Length = 857

 Score =  785 bits (2026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDEAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSENGYDPVYGAR 815


>gi|300718033|ref|YP_003742836.1| Chaperone protein [Erwinia billingiae Eb661]
 gi|299063869|emb|CAX60989.1| Chaperone protein [Erwinia billingiae Eb661]
          Length = 857

 Score =  785 bits (2026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/622 (59%), Positives = 496/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEA + I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S K
Sbjct: 380 YIADRQLPDKAIDLIDEAGSSIRMQIDSKPESLDRLERRIIQLKLEQQALKKETDDASIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ E+N+ E  Y+ LE+ WK EK  +  +Q IK E+E+ +L + +A R  D   +S
Sbjct: 440 RLSMLEDELNQKERDYSELEEEWKSEKASLSGTQTIKAELEQAKLAMEQARRLGDLAQMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q      +      LL+ +V   EIA++++R TGIPV ++++
Sbjct: 500 ELQYGKIPELEKQLALATQ------SEGKTMRLLRNRVTEVEIADVLARWTGIPVDRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEQDLHQRVIGQNEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++R+DMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRLDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E      
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALS 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V  +FRPEFINRID+++VF  L  ++I SIA IQL  L ++L     DL
Sbjct: 734 YPEMKDVVMTVVGQHFRPEFINRIDELVVFHPLGEQHIASIAKIQLQRLYDRLADRGYDL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS AAL K++  G+D +YGAR
Sbjct: 794 HISDAALHKLAENGYDPVYGAR 815


>gi|423204378|ref|ZP_17190934.1| chaperone ClpB [Aeromonas veronii AMC34]
 gi|404627243|gb|EKB24048.1| chaperone ClpB [Aeromonas veronii AMC34]
          Length = 857

 Score =  785 bits (2026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/622 (59%), Positives = 503/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIG PGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGAPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDLAKEEGNVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+R
Sbjct: 320 RQFIEKDAALERRFQKVLVEEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+K
Sbjct: 380 YIADRQLPDKAIDLIDEAAASIRLQIDSKPEALDRLERRIIQLKLEQQALMKEDDDASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI + + +Y  L+++WK EK  +  +Q IK  +E+ R  ++ A R  D   +S
Sbjct: 440 RLELINQEIGEKDREYNELDEVWKAEKAALAGTQHIKAALEQARQDLDVARRAGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + +LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEEQLHSRVIGQEEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ +++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALAEFLFDTQDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHHSEKD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  +M+ +   FRPEFINRID+ +VF  L  ++I SIA IQL  L  +L     ++
Sbjct: 734 YDEMKAMLMDVLTRSFRPEFINRIDETVVFHPLGEEHIKSIARIQLKSLMGRLEAQGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S+A L+K+ + GFD +YGAR
Sbjct: 794 EVSEALLEKLVHAGFDPVYGAR 815


>gi|420321790|ref|ZP_14823615.1| ATP-dependent chaperone ClpB [Shigella flexneri 2850-71]
 gi|391247097|gb|EIQ06353.1| ATP-dependent chaperone ClpB [Shigella flexneri 2850-71]
          Length = 857

 Score =  785 bits (2026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSENGYDPVYGAR 815


>gi|417286004|ref|ZP_12073295.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW07793]
 gi|386251245|gb|EII97412.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW07793]
          Length = 857

 Score =  785 bits (2026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSENGYDPVYGAR 815


>gi|415845853|ref|ZP_11525254.1| ATP-dependent chaperone ClpB [Shigella sonnei 53G]
 gi|417582098|ref|ZP_12232899.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_B2F1]
 gi|417756847|ref|ZP_12404920.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2B]
 gi|418041510|ref|ZP_12679732.1| protein disaggregation chaperone [Escherichia coli W26]
 gi|419019520|ref|ZP_13566825.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1E]
 gi|419035734|ref|ZP_13582819.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2D]
 gi|419115980|ref|ZP_13660995.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5A]
 gi|419403099|ref|ZP_13943819.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15C]
 gi|420327113|ref|ZP_14828859.1| ATP-dependent chaperone ClpB [Shigella flexneri CCH060]
 gi|420354031|ref|ZP_14855128.1| ATP-dependent chaperone ClpB [Shigella boydii 4444-74]
 gi|420364479|ref|ZP_14865357.1| ATP-dependent chaperone ClpB [Shigella sonnei 4822-66]
 gi|420392397|ref|ZP_14891648.1| ATP-dependent chaperone ClpB [Escherichia coli EPEC C342-62]
 gi|323167772|gb|EFZ53467.1| ATP-dependent chaperone ClpB [Shigella sonnei 53G]
 gi|345335555|gb|EGW67992.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_B2F1]
 gi|377859211|gb|EHU24045.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1E]
 gi|377873032|gb|EHU37672.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2B]
 gi|377878905|gb|EHU43484.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2D]
 gi|377959332|gb|EHV22828.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5A]
 gi|378245354|gb|EHY05291.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15C]
 gi|383475594|gb|EID67551.1| protein disaggregation chaperone [Escherichia coli W26]
 gi|391248417|gb|EIQ07658.1| ATP-dependent chaperone ClpB [Shigella flexneri CCH060]
 gi|391277052|gb|EIQ35812.1| ATP-dependent chaperone ClpB [Shigella boydii 4444-74]
 gi|391293394|gb|EIQ51676.1| ATP-dependent chaperone ClpB [Shigella sonnei 4822-66]
 gi|391312164|gb|EIQ69787.1| ATP-dependent chaperone ClpB [Escherichia coli EPEC C342-62]
          Length = 823

 Score =  785 bits (2026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 166 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 225

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 226 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 285

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 286 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 345

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 346 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 405

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 406 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 465

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 466 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 519

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 520 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 579

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 580 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 639

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 640 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 699

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 700 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 759

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 760 HISDEALKLLSENGYDPVYGAR 781


>gi|93005671|ref|YP_580108.1| ATPase AAA-2 [Psychrobacter cryohalolentis K5]
 gi|92393349|gb|ABE74624.1| ATPase AAA-2 [Psychrobacter cryohalolentis K5]
          Length = 865

 Score =  785 bits (2026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/624 (58%), Positives = 503/624 (80%), Gaps = 5/624 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQ+IING+VP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQKIINGDVPEGLRRKEVLSLDLGALIAGAKFRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 257 KAVLSDLSKQEGNVILFIDELHTLVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+ +S+R
Sbjct: 317 RKYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVDIQDSAIIAAARMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+++++E+DSKPE + KL+ RLIQLK++ E +K E D  ++ 
Sbjct: 377 YITDRKLPDKAIDLIDEAASRLRMEMDSKPESLGKLDSRLIQLKMQREVLKNEEDAGAQA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
              ++  +I +LE +YA+L +IW+ EK L+K SQQ+K+E++K R+  +KA+R+ D++ +S
Sbjct: 437 ERKVLDAQIEELEKEYADLNEIWQAEKALVKGSQQLKDELDKARIAYDKASREGDYEIMS 496

Query: 314 KLKYGELNKLERILKEKS---QKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSK 370
           KL+Y  + +LER + E     QK+    N+  K  LL+ KV   EIAE+V+  TGIPVSK
Sbjct: 497 KLQYETIPQLERRIHESDLAEQKEQTGENSGVK--LLRNKVTDNEIAEVVAAATGIPVSK 554

Query: 371 IVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVG 430
           ++Q ER+K+L +E  L +RV+GQDEA+ AV+NA+RRSR+GLSD  RP GSF+FLGPTGVG
Sbjct: 555 MMQGERDKMLAMEEKLHERVIGQDEAVEAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVG 614

Query: 431 KTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKP 490
           KTEL K+L+  +F++E++I+RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKP
Sbjct: 615 KTELTKSLANFLFDSEDAIVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGALTEAVRRKP 674

Query: 491 YSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK 550
           YS+IL DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+I+MTSNLGS KI+EM  
Sbjct: 675 YSVILFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIIMTSNLGSHKIQEMVG 734

Query: 551 GDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNM 610
              E IK  VM+ V  +FRPEF+NRID+I+VF  L    +  IA IQLN L+ +L +  +
Sbjct: 735 ESYEDIKAEVMDSVGQHFRPEFVNRIDEIVVFHPLGMSQMAGIAAIQLNRLRQRLYEREL 794

Query: 611 DLKISKAALKKISNIGFDLIYGAR 634
           D+++S  A+ K+  +G+D +YGAR
Sbjct: 795 DIELSAEAMNKLVAVGYDPVYGAR 818


>gi|445275841|ref|ZP_21410580.1| protein disaggregation chaperone, partial [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 436]
 gi|444887455|gb|ELY11153.1| protein disaggregation chaperone, partial [Salmonella enterica
           subsp. enterica serovar Enteritidis str. 436]
          Length = 832

 Score =  785 bits (2026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 175 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 234

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 235 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 294

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 295 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 354

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 355 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 414

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 415 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 474

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 475 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 528

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 529 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 588

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 589 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 648

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 649 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 708

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 709 YGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEI 768

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 769 HISDEALKLLSANGYDPVYGAR 790


>gi|418257812|ref|ZP_12881289.1| ATP-dependent chaperone ClpB [Shigella flexneri 6603-63]
 gi|397896131|gb|EJL12551.1| ATP-dependent chaperone ClpB [Shigella flexneri 6603-63]
          Length = 823

 Score =  785 bits (2026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 166 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 225

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 226 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 285

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 286 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 345

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 346 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 405

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 406 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 465

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 466 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 519

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 520 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 579

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 580 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 639

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 640 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 699

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 700 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 759

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 760 HISDEALKLLSENGYDPVYGAR 781


>gi|161502241|ref|YP_001569353.1| protein disaggregation chaperone [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:- str. RSK2980]
 gi|160863588|gb|ABX20211.1| hypothetical protein SARI_00266 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-]
          Length = 861

 Score =  785 bits (2026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 264 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 324 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 384 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 444 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 504 ELQYGKIPELEKQLEAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 558 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 618 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I +IA IQL  L  +L +   ++
Sbjct: 738 YGRMKEMVLGVVGHNFRPEFINRIDEVVVFHPLGEQHIAAIAQIQLQRLYKRLEERGYEI 797

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 798 HISDEALKLLSANGYDPVYGAR 819


>gi|419244574|ref|ZP_13787210.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9D]
 gi|378089111|gb|EHW50958.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9D]
          Length = 857

 Score =  785 bits (2026), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSENGYDPVYGAR 815


>gi|59711173|ref|YP_203949.1| protein disaggregation chaperone [Vibrio fischeri ES114]
 gi|59479274|gb|AAW85061.1| protein disaggregation chaperone [Vibrio fischeri ES114]
          Length = 861

 Score =  784 bits (2025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 502/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IG+PGVGKTAIVEGLAQRIINGEVP  L +K++L LDI  L+AG K+RGEFE+RL
Sbjct: 200 NNPVIIGQPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDIGALVAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKEEGSVILFIDEVHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPTVEDTVAILRGLKERYEIHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +DKL+R++IQLKIE +A+ +E D++S K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPESLDKLDRKIIQLKIEQQALVKESDDASLK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +  E+ + E +YA LE++WK EK  +  +Q IK E+E  R  +  A R  D   +S
Sbjct: 440 RLDSLNLELMQKEREYAELEEVWKAEKAALSGTQHIKTELETARSNMEIARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + +LLK KV   EIAE++SR TGIPV+K+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMSLLKNKVTDAEIAEVLSRQTGIPVNKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L  RV+GQ EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLKMEEVLHHRVIGQAEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKSLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGS+KI++   + +
Sbjct: 674 LLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSEKIQQHFGELN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I +IA+IQL  L+ +L + +  L
Sbjct: 734 YAGIKEVVMDVVSQHFRPEFLNRVDETVVFHPLAQEHIKNIASIQLQRLEKRLNEKDYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +++  AL  I+  GFD +YGAR
Sbjct: 794 QVTDEALNLIAEAGFDPVYGAR 815


>gi|421464124|ref|ZP_15912817.1| ATP-dependent chaperone protein ClpB [Acinetobacter radioresistens
           WC-A-157]
 gi|400206498|gb|EJO37475.1| ATP-dependent chaperone protein ClpB [Acinetobacter radioresistens
           WC-A-157]
          Length = 859

 Score =  784 bits (2025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/622 (58%), Positives = 503/622 (80%), Gaps = 6/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL  K++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKDKQVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  +I+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLNDLAKQEGRVILFIDELHTLVGAGKTDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVKILDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+E+DSKPE +DKL+RRLIQLK++ EA+K++ D  SK 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMELDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKS 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++K+I +++ +Y +LE++WK EKTL++ +++ + E+++ R+ + KA R+ DW   S
Sbjct: 437 EVNYLEKQIEEVQKEYNDLEEVWKAEKTLVEGTKKAQVELDQARVALEKAQREGDWAEAS 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ L++      ++  +  +  LL+ KV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 RLQYGVIPELQKQLEQD-----EVIEDHEEPKLLRNKVTDNEIAEVVSAATGIPVAKMLQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E  L  RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GEREKLLHMEEFLHNRVVGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           IL DE+EKA+ DVFNILLQ+LDDGRLTD++GR I+F+NT+IVMTSNLGS  ++E+ +G  
Sbjct: 672 ILFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVIDFKNTVIVMTSNLGSQDVRELGEGAS 731

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E ++  VM+ V  +FRPEFINRID++++F  L +  I  IA+IQL  L+++L + +M L
Sbjct: 732 DEEMRSVVMSAVSHHFRPEFINRIDELVIFHSLKKSQIRGIADIQLERLRSRLAERDMSL 791

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            I   A   + + GFD +YGAR
Sbjct: 792 TIDDTAFDLLIDAGFDPVYGAR 813


>gi|423203218|ref|ZP_17189796.1| chaperone ClpB [Aeromonas veronii AER39]
 gi|404613447|gb|EKB10469.1| chaperone ClpB [Aeromonas veronii AER39]
          Length = 857

 Score =  784 bits (2025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/622 (58%), Positives = 503/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIG PGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGAPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 260 KAVLTDLAKEEGNVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+K
Sbjct: 380 YIADRQLPDKAIDLIDEAAASIRLQIDSKPEALDRLERRIIQLKLEQQALMKEDDDASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI + + +Y  L+++WK EK  +  +Q IK  +E+ R  ++ A R  D   +S
Sbjct: 440 RLELINQEIGEKDREYNELDEVWKAEKAALAGTQHIKAALEQARQDLDVARRAGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + +LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEDQLHSRVIGQEEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ +++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALAEFLFDTQDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQEHHSEKD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  +M+ +   FRPEFINRID+ +VF  L   +I SIA IQL  L  +L     ++
Sbjct: 734 YDEMKAMLMDVLTRSFRPEFINRIDETVVFHPLGEDHIKSIARIQLKSLMGRLEAQGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S+A L+K+ + GFD +YGAR
Sbjct: 794 EVSEALLEKLVHAGFDPVYGAR 815


>gi|15832709|ref|NP_311482.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
           Sakai]
 gi|16130513|ref|NP_417083.1| protein disaggregation chaperone [Escherichia coli str. K-12
           substr. MG1655]
 gi|74313151|ref|YP_311570.1| protein disaggregation chaperone [Shigella sonnei Ss046]
 gi|82545045|ref|YP_408992.1| protein disaggregation chaperone [Shigella boydii Sb227]
 gi|110642755|ref|YP_670485.1| protein disaggregation chaperone [Escherichia coli 536]
 gi|157158232|ref|YP_001463913.1| protein disaggregation chaperone [Escherichia coli E24377A]
 gi|157162068|ref|YP_001459386.1| protein disaggregation chaperone [Escherichia coli HS]
 gi|168752067|ref|ZP_02777089.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4113]
 gi|168758662|ref|ZP_02783669.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4401]
 gi|168762385|ref|ZP_02787392.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4501]
 gi|168771698|ref|ZP_02796705.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4486]
 gi|168773480|ref|ZP_02798487.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4196]
 gi|168778570|ref|ZP_02803577.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4076]
 gi|168789495|ref|ZP_02814502.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC869]
 gi|168801710|ref|ZP_02826717.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC508]
 gi|170019129|ref|YP_001724083.1| protein disaggregation chaperone [Escherichia coli ATCC 8739]
 gi|170082197|ref|YP_001731517.1| protein disaggregation chaperone [Escherichia coli str. K-12
           substr. DH10B]
 gi|170683980|ref|YP_001744777.1| protein disaggregation chaperone [Escherichia coli SMS-3-5]
 gi|188492624|ref|ZP_02999894.1| ATP-dependent chaperone protein ClpB [Escherichia coli 53638]
 gi|191169051|ref|ZP_03030814.1| ATP-dependent chaperone protein ClpB [Escherichia coli B7A]
 gi|191174569|ref|ZP_03036064.1| ATP-dependent chaperone protein ClpB [Escherichia coli F11]
 gi|193064051|ref|ZP_03045136.1| ATP-dependent chaperone protein ClpB [Escherichia coli E22]
 gi|194430164|ref|ZP_03062665.1| ATP-dependent chaperone protein ClpB [Escherichia coli B171]
 gi|194439334|ref|ZP_03071412.1| ATP-dependent chaperone protein ClpB [Escherichia coli 101-1]
 gi|195940187|ref|ZP_03085569.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
           EC4024]
 gi|208805997|ref|ZP_03248334.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4206]
 gi|208813052|ref|ZP_03254381.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4045]
 gi|208819305|ref|ZP_03259625.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4042]
 gi|209397795|ref|YP_002272065.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
           EC4115]
 gi|209920069|ref|YP_002294153.1| protein disaggregation chaperone [Escherichia coli SE11]
 gi|215487931|ref|YP_002330362.1| protein disaggregation chaperone [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217326744|ref|ZP_03442827.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str.
           TW14588]
 gi|218555172|ref|YP_002388085.1| protein disaggregation chaperone [Escherichia coli IAI1]
 gi|218690711|ref|YP_002398923.1| protein disaggregation chaperone [Escherichia coli ED1a]
 gi|218696217|ref|YP_002403884.1| protein disaggregation chaperone [Escherichia coli 55989]
 gi|218701104|ref|YP_002408733.1| protein disaggregation chaperone [Escherichia coli IAI39]
 gi|218706094|ref|YP_002413613.1| protein disaggregation chaperone [Escherichia coli UMN026]
 gi|238901753|ref|YP_002927549.1| protein disaggregation chaperone [Escherichia coli BW2952]
 gi|251785915|ref|YP_003000219.1| ClpB chaperone [Escherichia coli BL21(DE3)]
 gi|253772512|ref|YP_003035343.1| protein disaggregation chaperone [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254162563|ref|YP_003045671.1| protein disaggregation chaperone [Escherichia coli B str. REL606]
 gi|254289324|ref|YP_003055072.1| protein disaggregation chaperone [Escherichia coli BL21(DE3)]
 gi|254794540|ref|YP_003079377.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
           TW14359]
 gi|260845274|ref|YP_003223052.1| protein disaggregation chaperone ClpB [Escherichia coli O103:H2
           str. 12009]
 gi|260856682|ref|YP_003230573.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
           11368]
 gi|260869274|ref|YP_003235676.1| protein disaggregation chaperone ClpB [Escherichia coli O111:H-
           str. 11128]
 gi|261227477|ref|ZP_05941758.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261255671|ref|ZP_05948204.1| protein disaggregation chaperone ClpB [Escherichia coli O157:H7
           str. FRIK966]
 gi|297516260|ref|ZP_06934646.1| protein disaggregation chaperone [Escherichia coli OP50]
 gi|301024190|ref|ZP_07187897.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 196-1]
 gi|306812488|ref|ZP_07446686.1| protein disaggregation chaperone [Escherichia coli NC101]
 gi|307315094|ref|ZP_07594678.1| ATP-dependent chaperone ClpB [Escherichia coli W]
 gi|312965507|ref|ZP_07779739.1| ATP-dependent chaperone ClpB [Escherichia coli 2362-75]
 gi|331664159|ref|ZP_08365068.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA143]
 gi|331669344|ref|ZP_08370190.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA271]
 gi|331674036|ref|ZP_08374798.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA280]
 gi|378711951|ref|YP_005276844.1| ATP-dependent chaperone ClpB [Escherichia coli KO11FL]
 gi|383179715|ref|YP_005457720.1| protein disaggregation chaperone [Shigella sonnei 53G]
 gi|386281657|ref|ZP_10059317.1| chaperone ClpB [Escherichia sp. 4_1_40B]
 gi|386594643|ref|YP_006091043.1| ATP-dependent chaperone ClpB [Escherichia coli DH1]
 gi|386609990|ref|YP_006125476.1| protein disaggregation chaperone [Escherichia coli W]
 gi|386615294|ref|YP_006134960.1| ATP-dependent chaperone ClpB [Escherichia coli UMNK88]
 gi|386620191|ref|YP_006139771.1| ClpB protein [Escherichia coli NA114]
 gi|386625329|ref|YP_006145057.1| protein disaggregation chaperone [Escherichia coli O7:K1 str. CE10]
 gi|386640115|ref|YP_006106913.1| ATP-dependent chaperone protein ClpB [Escherichia coli ABU 83972]
 gi|386700465|ref|YP_006164302.1| protein disaggregation chaperone [Escherichia coli KO11FL]
 gi|386705853|ref|YP_006169700.1| Chaperone protein clpB [Escherichia coli P12b]
 gi|386710479|ref|YP_006174200.1| protein disaggregation chaperone [Escherichia coli W]
 gi|387507957|ref|YP_006160213.1| protein disaggregation chaperone [Escherichia coli O55:H7 str.
           RM12579]
 gi|387608240|ref|YP_006097096.1| chaperone (heat-shock protein F84.1) [Escherichia coli 042]
 gi|387613238|ref|YP_006116354.1| chaperone (heat-shock protein F84.1) [Escherichia coli ETEC H10407]
 gi|387622288|ref|YP_006129916.1| heat shock protein [Escherichia coli DH1]
 gi|387830483|ref|YP_003350420.1| ATP-dependent protease [Escherichia coli SE15]
 gi|388478624|ref|YP_490816.1| protein disaggregation chaperone [Escherichia coli str. K-12
           substr. W3110]
 gi|404375936|ref|ZP_10981112.1| chaperone ClpB [Escherichia sp. 1_1_43]
 gi|407470487|ref|YP_006783070.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
           2009EL-2071]
 gi|407480851|ref|YP_006778000.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
           2011C-3493]
 gi|410481417|ref|YP_006768963.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
           2009EL-2050]
 gi|414577322|ref|ZP_11434499.1| ATP-dependent chaperone ClpB [Shigella sonnei 3233-85]
 gi|415778701|ref|ZP_11489695.1| ATP-dependent chaperone ClpB [Escherichia coli 3431]
 gi|415784644|ref|ZP_11492465.1| ATP-dependent chaperone ClpB [Escherichia coli EPECa14]
 gi|415822347|ref|ZP_11510975.1| ATP-dependent chaperone ClpB [Escherichia coli OK1180]
 gi|415828630|ref|ZP_11515128.1| ATP-dependent chaperone ClpB [Escherichia coli OK1357]
 gi|416260475|ref|ZP_11640263.1| ClpB protein [Shigella dysenteriae CDC 74-1112]
 gi|416279141|ref|ZP_11644813.1| ClpB protein [Shigella boydii ATCC 9905]
 gi|416299381|ref|ZP_11652348.1| ClpB protein [Shigella flexneri CDC 796-83]
 gi|416307900|ref|ZP_11654808.1| ClpB protein [Escherichia coli O157:H7 str. 1044]
 gi|416321751|ref|ZP_11663599.1| ClpB protein [Escherichia coli O157:H7 str. EC1212]
 gi|416326811|ref|ZP_11666923.1| ClpB protein [Escherichia coli O157:H7 str. 1125]
 gi|416336625|ref|ZP_11673095.1| ClpB protein [Escherichia coli WV_060327]
 gi|416345929|ref|ZP_11679302.1| ClpB protein [Escherichia coli EC4100B]
 gi|416776084|ref|ZP_11874696.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
           G5101]
 gi|416787728|ref|ZP_11879610.1| protein disaggregation chaperone [Escherichia coli O157:H- str.
           493-89]
 gi|416799412|ref|ZP_11884525.1| protein disaggregation chaperone [Escherichia coli O157:H- str. H
           2687]
 gi|416809743|ref|ZP_11889208.1| protein disaggregation chaperone [Escherichia coli O55:H7 str.
           3256-97]
 gi|416820392|ref|ZP_11893767.1| protein disaggregation chaperone [Escherichia coli O55:H7 str. USDA
           5905]
 gi|416831290|ref|ZP_11899055.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
           LSU-61]
 gi|416898784|ref|ZP_11928330.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_7v]
 gi|417115524|ref|ZP_11966660.1| ATP-dependent chaperone protein ClpB [Escherichia coli 1.2741]
 gi|417122593|ref|ZP_11971851.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0246]
 gi|417135528|ref|ZP_11980313.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.0588]
 gi|417150815|ref|ZP_11990554.1| ATP-dependent chaperone protein ClpB [Escherichia coli 1.2264]
 gi|417154595|ref|ZP_11992724.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0497]
 gi|417166450|ref|ZP_11999806.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0741]
 gi|417174839|ref|ZP_12004635.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.2608]
 gi|417184955|ref|ZP_12010451.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0624]
 gi|417188936|ref|ZP_12012494.1| ATP-dependent chaperone protein ClpB [Escherichia coli 4.0522]
 gi|417214357|ref|ZP_12022904.1| ATP-dependent chaperone protein ClpB [Escherichia coli JB1-95]
 gi|417222149|ref|ZP_12025589.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.154]
 gi|417231520|ref|ZP_12032918.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.0959]
 gi|417251352|ref|ZP_12043117.1| ATP-dependent chaperone protein ClpB [Escherichia coli 4.0967]
 gi|417262165|ref|ZP_12049645.1| ATP-dependent chaperone protein ClpB [Escherichia coli 2.3916]
 gi|417268814|ref|ZP_12056174.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.3884]
 gi|417272803|ref|ZP_12060152.1| ATP-dependent chaperone protein ClpB [Escherichia coli 2.4168]
 gi|417292279|ref|ZP_12079560.1| ATP-dependent chaperone protein ClpB [Escherichia coli B41]
 gi|417299788|ref|ZP_12087015.1| ATP-dependent chaperone protein ClpB [Escherichia coli 900105
           (10e)]
 gi|417587600|ref|ZP_12238367.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_C165-02]
 gi|417592929|ref|ZP_12243624.1| ATP-dependent chaperone ClpB [Escherichia coli 2534-86]
 gi|417597900|ref|ZP_12248535.1| ATP-dependent chaperone ClpB [Escherichia coli 3030-1]
 gi|417603264|ref|ZP_12253832.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_94C]
 gi|417609221|ref|ZP_12259723.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_DG131-3]
 gi|417614061|ref|ZP_12264518.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_EH250]
 gi|417619179|ref|ZP_12269592.1| ATP-dependent chaperone ClpB [Escherichia coli G58-1]
 gi|417631236|ref|ZP_12281469.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_MHI813]
 gi|417635568|ref|ZP_12285779.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_S1191]
 gi|417640347|ref|ZP_12290487.1| ATP-dependent chaperone ClpB [Escherichia coli TX1999]
 gi|417663139|ref|ZP_12312720.1| ClpB protein [Escherichia coli AA86]
 gi|417667996|ref|ZP_12317540.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_O31]
 gi|417713893|ref|ZP_12362856.1| ATP-dependent chaperone ClpB [Shigella flexneri K-272]
 gi|417718518|ref|ZP_12367412.1| ATP-dependent chaperone ClpB [Shigella flexneri K-227]
 gi|417806140|ref|ZP_12453086.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
           LB226692]
 gi|417833888|ref|ZP_12480335.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
           01-09591]
 gi|417943982|ref|ZP_12587227.1| protein disaggregation chaperone [Escherichia coli XH140A]
 gi|417978062|ref|ZP_12618836.1| protein disaggregation chaperone [Escherichia coli XH001]
 gi|418267386|ref|ZP_12886607.1| ATP-dependent chaperone ClpB [Shigella sonnei str. Moseley]
 gi|418304087|ref|ZP_12915881.1| ATP-dependent chaperone ClpB [Escherichia coli UMNF18]
 gi|418944161|ref|ZP_13497263.1| protein disaggregation chaperone [Escherichia coli O157:H43 str.
           T22]
 gi|418957031|ref|ZP_13508956.1| ATP-dependent chaperone protein ClpB [Escherichia coli J53]
 gi|418998025|ref|ZP_13545616.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1A]
 gi|419003146|ref|ZP_13550669.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1B]
 gi|419008833|ref|ZP_13556262.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1C]
 gi|419014504|ref|ZP_13561851.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1D]
 gi|419025019|ref|ZP_13572244.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2A]
 gi|419030056|ref|ZP_13577216.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2C]
 gi|419040762|ref|ZP_13587786.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2E]
 gi|419045837|ref|ZP_13592780.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3A]
 gi|419048721|ref|ZP_13595643.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3B]
 gi|419056229|ref|ZP_13603069.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3C]
 gi|419065813|ref|ZP_13612510.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3D]
 gi|419070710|ref|ZP_13616330.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3E]
 gi|419074940|ref|ZP_13620486.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3F]
 gi|419081790|ref|ZP_13627237.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4A]
 gi|419085877|ref|ZP_13631255.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4B]
 gi|419094680|ref|ZP_13639956.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4C]
 gi|419099393|ref|ZP_13644589.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4D]
 gi|419105595|ref|ZP_13650721.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4E]
 gi|419112772|ref|ZP_13657812.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4F]
 gi|419121670|ref|ZP_13666618.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5B]
 gi|419127131|ref|ZP_13672012.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5C]
 gi|419132616|ref|ZP_13677451.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5D]
 gi|419137752|ref|ZP_13682543.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5E]
 gi|419143546|ref|ZP_13688283.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6A]
 gi|419149752|ref|ZP_13694404.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6B]
 gi|419155000|ref|ZP_13699560.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6C]
 gi|419160287|ref|ZP_13704791.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6D]
 gi|419171261|ref|ZP_13715147.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7A]
 gi|419175974|ref|ZP_13719790.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7B]
 gi|419181894|ref|ZP_13725506.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7C]
 gi|419187344|ref|ZP_13730855.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7D]
 gi|419200632|ref|ZP_13743898.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8A]
 gi|419203059|ref|ZP_13746263.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8B]
 gi|419210823|ref|ZP_13753899.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8C]
 gi|419219050|ref|ZP_13762016.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8E]
 gi|419233674|ref|ZP_13776447.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9B]
 gi|419238960|ref|ZP_13781674.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9C]
 gi|419250237|ref|ZP_13792815.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9E]
 gi|419256078|ref|ZP_13798590.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10A]
 gi|419262386|ref|ZP_13804799.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10B]
 gi|419273828|ref|ZP_13816122.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10D]
 gi|419278381|ref|ZP_13820632.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10E]
 gi|419285292|ref|ZP_13827462.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10F]
 gi|419290582|ref|ZP_13832671.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11A]
 gi|419295915|ref|ZP_13837958.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11B]
 gi|419307494|ref|ZP_13849392.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11D]
 gi|419312508|ref|ZP_13854369.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11E]
 gi|419317886|ref|ZP_13859688.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12A]
 gi|419324074|ref|ZP_13865766.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12B]
 gi|419330102|ref|ZP_13871703.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12C]
 gi|419335677|ref|ZP_13877199.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12D]
 gi|419341032|ref|ZP_13882495.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12E]
 gi|419346241|ref|ZP_13887613.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13A]
 gi|419371080|ref|ZP_13912196.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14A]
 gi|419376528|ref|ZP_13917551.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14B]
 gi|419381863|ref|ZP_13922812.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14C]
 gi|419387210|ref|ZP_13928085.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14D]
 gi|419392708|ref|ZP_13933514.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15A]
 gi|419397694|ref|ZP_13938462.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15B]
 gi|419408266|ref|ZP_13948952.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15D]
 gi|419413747|ref|ZP_13954398.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15E]
 gi|419701433|ref|ZP_14229033.1| protein disaggregation chaperone [Escherichia coli SCI-07]
 gi|419806263|ref|ZP_14331376.1| protein disaggregation chaperone [Escherichia coli AI27]
 gi|419865985|ref|ZP_14388357.1| protein disaggregation chaperone [Escherichia coli O103:H25 str.
           CVM9340]
 gi|419872055|ref|ZP_14394099.1| protein disaggregation chaperone [Escherichia coli O103:H2 str.
           CVM9450]
 gi|419878481|ref|ZP_14399948.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
           CVM9534]
 gi|419880948|ref|ZP_14402308.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
           CVM9545]
 gi|419887812|ref|ZP_14408365.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
           CVM9570]
 gi|419897690|ref|ZP_14417271.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
           CVM9574]
 gi|419904021|ref|ZP_14423031.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
           CVM9942]
 gi|419906107|ref|ZP_14425039.1| heat shock protein [Escherichia coli O26:H11 str. CVM10026]
 gi|419921252|ref|ZP_14439309.1| protein disaggregation chaperone [Escherichia coli 541-15]
 gi|419934375|ref|ZP_14451489.1| protein disaggregation chaperone [Escherichia coli 576-1]
 gi|419939900|ref|ZP_14456683.1| protein disaggregation chaperone [Escherichia coli 75]
 gi|419948570|ref|ZP_14464864.1| protein disaggregation chaperone [Escherichia coli CUMT8]
 gi|420091280|ref|ZP_14603031.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
           CVM9602]
 gi|420093021|ref|ZP_14604709.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
           CVM9634]
 gi|420103377|ref|ZP_14614257.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
           CVM9455]
 gi|420110872|ref|ZP_14620772.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
           CVM9553]
 gi|420116853|ref|ZP_14626228.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
           CVM10021]
 gi|420124515|ref|ZP_14633366.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
           CVM10030]
 gi|420128968|ref|ZP_14637514.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
           CVM10224]
 gi|420135381|ref|ZP_14643468.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
           CVM9952]
 gi|420270857|ref|ZP_14773214.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA22]
 gi|420276604|ref|ZP_14778887.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA40]
 gi|420281787|ref|ZP_14784022.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW06591]
 gi|420289382|ref|ZP_14791562.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW10246]
 gi|420290345|ref|ZP_14792512.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW11039]
 gi|420299471|ref|ZP_14801520.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09109]
 gi|420305417|ref|ZP_14807410.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW10119]
 gi|420312633|ref|ZP_14814551.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1738]
 gi|420316427|ref|ZP_14818301.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1734]
 gi|420386648|ref|ZP_14885996.1| ATP-dependent chaperone ClpB [Escherichia coli EPECa12]
 gi|421778297|ref|ZP_16214875.1| protein disaggregation chaperone [Escherichia coli AD30]
 gi|421813585|ref|ZP_16249302.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0416]
 gi|421819401|ref|ZP_16254896.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0821]
 gi|421825399|ref|ZP_16260756.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK920]
 gi|421831559|ref|ZP_16266849.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA7]
 gi|422760079|ref|ZP_16813839.1| ATP-dependent chaperone ClpB [Escherichia coli E1167]
 gi|422767878|ref|ZP_16821604.1| ATP-dependent chaperone ClpB [Escherichia coli E1520]
 gi|422771505|ref|ZP_16825195.1| ATP-dependent chaperone ClpB [Escherichia coli E482]
 gi|422776207|ref|ZP_16829862.1| ATP-dependent chaperone ClpB [Escherichia coli H120]
 gi|422787849|ref|ZP_16840587.1| ATP-dependent chaperone ClpB [Escherichia coli H489]
 gi|422803517|ref|ZP_16852003.1| ATP-dependent chaperone ClpB [Escherichia coli M863]
 gi|422819253|ref|ZP_16867464.1| chaperone ClpB [Escherichia coli M919]
 gi|422832204|ref|ZP_16880320.1| chaperone ClpB [Escherichia coli B093]
 gi|422836955|ref|ZP_16884987.1| chaperone ClpB [Escherichia coli E101]
 gi|422962607|ref|ZP_16972880.1| chaperone ClpB [Escherichia coli H494]
 gi|422988714|ref|ZP_16979487.1| chaperone ClpB [Escherichia coli O104:H4 str. C227-11]
 gi|422995606|ref|ZP_16986370.1| chaperone ClpB [Escherichia coli O104:H4 str. C236-11]
 gi|423000751|ref|ZP_16991505.1| chaperone ClpB [Escherichia coli O104:H4 str. 09-7901]
 gi|423004423|ref|ZP_16995169.1| chaperone ClpB [Escherichia coli O104:H4 str. 04-8351]
 gi|423010923|ref|ZP_17001657.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-3677]
 gi|423020151|ref|ZP_17010860.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4404]
 gi|423025317|ref|ZP_17016014.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4522]
 gi|423031138|ref|ZP_17021825.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4623]
 gi|423038963|ref|ZP_17029637.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C1]
 gi|423044083|ref|ZP_17034750.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C2]
 gi|423045811|ref|ZP_17036471.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C3]
 gi|423054350|ref|ZP_17043157.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C4]
 gi|423061325|ref|ZP_17050121.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C5]
 gi|423704031|ref|ZP_17678456.1| chaperone ClpB [Escherichia coli H730]
 gi|423706710|ref|ZP_17681093.1| chaperone ClpB [Escherichia coli B799]
 gi|423726319|ref|ZP_17700374.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA31]
 gi|424078689|ref|ZP_17815677.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA505]
 gi|424085155|ref|ZP_17821656.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA517]
 gi|424091567|ref|ZP_17827508.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1996]
 gi|424098188|ref|ZP_17833506.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1985]
 gi|424104420|ref|ZP_17839198.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1990]
 gi|424111092|ref|ZP_17845334.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93-001]
 gi|424117029|ref|ZP_17850875.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA3]
 gi|424123211|ref|ZP_17856539.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA5]
 gi|424129376|ref|ZP_17862289.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA9]
 gi|424135648|ref|ZP_17868118.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA10]
 gi|424142216|ref|ZP_17874109.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA14]
 gi|424148643|ref|ZP_17880025.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA15]
 gi|424154459|ref|ZP_17885421.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA24]
 gi|424251186|ref|ZP_17890985.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA25]
 gi|424329347|ref|ZP_17896896.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA28]
 gi|424450894|ref|ZP_17902607.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA32]
 gi|424457097|ref|ZP_17908240.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA33]
 gi|424463535|ref|ZP_17913979.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA39]
 gi|424469873|ref|ZP_17919703.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA41]
 gi|424476396|ref|ZP_17925719.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA42]
 gi|424482151|ref|ZP_17931138.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW07945]
 gi|424488309|ref|ZP_17936884.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09098]
 gi|424494886|ref|ZP_17942609.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09195]
 gi|424501680|ref|ZP_17948582.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4203]
 gi|424507926|ref|ZP_17954329.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4196]
 gi|424515247|ref|ZP_17959938.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW14313]
 gi|424521466|ref|ZP_17965601.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW14301]
 gi|424527359|ref|ZP_17971082.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4421]
 gi|424545659|ref|ZP_17988072.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4402]
 gi|424551901|ref|ZP_17993766.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4439]
 gi|424558086|ref|ZP_17999509.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4436]
 gi|424564431|ref|ZP_18005439.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4437]
 gi|424570565|ref|ZP_18011125.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4448]
 gi|424576712|ref|ZP_18016793.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1845]
 gi|424582550|ref|ZP_18022202.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1863]
 gi|424751118|ref|ZP_18179160.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
           CFSAN001629]
 gi|424761399|ref|ZP_18188980.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
           CFSAN001630]
 gi|424773376|ref|ZP_18200438.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
           CFSAN001632]
 gi|424815314|ref|ZP_18240465.1| protein disaggregation chaperone [Escherichia fergusonii ECD227]
 gi|425100569|ref|ZP_18503290.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.4870]
 gi|425105317|ref|ZP_18507640.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.2239]
 gi|425116070|ref|ZP_18517867.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0566]
 gi|425120835|ref|ZP_18522528.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0569]
 gi|425127258|ref|ZP_18528433.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0586]
 gi|425132990|ref|ZP_18533845.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.2524]
 gi|425139496|ref|ZP_18539883.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0833]
 gi|425145289|ref|ZP_18545289.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0869]
 gi|425151401|ref|ZP_18551020.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.0221]
 gi|425163622|ref|ZP_18562514.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA506]
 gi|425169365|ref|ZP_18567845.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA507]
 gi|425181458|ref|ZP_18579160.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1999]
 gi|425187724|ref|ZP_18585004.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1997]
 gi|425194498|ref|ZP_18591273.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE1487]
 gi|425207358|ref|ZP_18603162.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK2001]
 gi|425213113|ref|ZP_18608520.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA4]
 gi|425219234|ref|ZP_18614207.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA23]
 gi|425225784|ref|ZP_18620257.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA49]
 gi|425232047|ref|ZP_18626093.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA45]
 gi|425237966|ref|ZP_18631691.1| ATP-dependent chaperone protein ClpB [Escherichia coli TT12B]
 gi|425244183|ref|ZP_18637497.1| ATP-dependent chaperone protein ClpB [Escherichia coli MA6]
 gi|425250353|ref|ZP_18643295.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5905]
 gi|425256175|ref|ZP_18648701.1| ATP-dependent chaperone protein ClpB [Escherichia coli CB7326]
 gi|425262430|ref|ZP_18654445.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC96038]
 gi|425268429|ref|ZP_18660064.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5412]
 gi|425273745|ref|ZP_18665153.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW15901]
 gi|425284289|ref|ZP_18675324.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW00353]
 gi|425295864|ref|ZP_18686073.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA38]
 gi|425306330|ref|ZP_18696028.1| ATP-dependent chaperone protein ClpB [Escherichia coli N1]
 gi|425312568|ref|ZP_18701759.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1735]
 gi|425324632|ref|ZP_18713008.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1737]
 gi|425330997|ref|ZP_18718860.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1846]
 gi|425337173|ref|ZP_18724553.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1847]
 gi|425343514|ref|ZP_18730411.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1848]
 gi|425349324|ref|ZP_18735799.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1849]
 gi|425355619|ref|ZP_18741692.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1850]
 gi|425361583|ref|ZP_18747236.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1856]
 gi|425367763|ref|ZP_18752931.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1862]
 gi|425374112|ref|ZP_18758760.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1864]
 gi|425380770|ref|ZP_18764785.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1865]
 gi|425387002|ref|ZP_18770565.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1866]
 gi|425395081|ref|ZP_18778175.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1868]
 gi|425399791|ref|ZP_18782502.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1869]
 gi|425405876|ref|ZP_18788105.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1870]
 gi|425412267|ref|ZP_18794036.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE098]
 gi|425418589|ref|ZP_18799865.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK523]
 gi|425423439|ref|ZP_18804603.1| ATP-dependent chaperone protein ClpB [Escherichia coli 0.1288]
 gi|425429849|ref|ZP_18810467.1| ATP-dependent chaperone protein ClpB [Escherichia coli 0.1304]
 gi|427805771|ref|ZP_18972838.1| heat shock protein [Escherichia coli chi7122]
 gi|427810267|ref|ZP_18977332.1| heat shock protein [Escherichia coli]
 gi|428948274|ref|ZP_19020564.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.1467]
 gi|428954364|ref|ZP_19026171.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.1042]
 gi|428960336|ref|ZP_19031650.1| ATP-dependent chaperone protein ClpB [Escherichia coli 89.0511]
 gi|428966954|ref|ZP_19037681.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.0091]
 gi|428972670|ref|ZP_19043017.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.0039]
 gi|428979173|ref|ZP_19049007.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.2281]
 gi|428984924|ref|ZP_19054328.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0055]
 gi|428991079|ref|ZP_19060077.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0056]
 gi|428996949|ref|ZP_19065554.1| ATP-dependent chaperone protein ClpB [Escherichia coli 94.0618]
 gi|429003194|ref|ZP_19071327.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0183]
 gi|429009275|ref|ZP_19076800.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.1288]
 gi|429021689|ref|ZP_19088221.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0428]
 gi|429033930|ref|ZP_19099462.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0939]
 gi|429039986|ref|ZP_19105104.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0932]
 gi|429045892|ref|ZP_19110615.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0107]
 gi|429051310|ref|ZP_19115880.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0003]
 gi|429056686|ref|ZP_19121010.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.1742]
 gi|429062187|ref|ZP_19126210.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0007]
 gi|429068460|ref|ZP_19131935.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0672]
 gi|429074406|ref|ZP_19137661.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0678]
 gi|429079599|ref|ZP_19142738.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0713]
 gi|429720179|ref|ZP_19255107.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9450]
 gi|429772079|ref|ZP_19304100.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02030]
 gi|429777024|ref|ZP_19309000.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02033-1]
 gi|429785751|ref|ZP_19317647.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02092]
 gi|429791641|ref|ZP_19323496.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02093]
 gi|429792489|ref|ZP_19324339.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02281]
 gi|429799065|ref|ZP_19330864.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02318]
 gi|429807578|ref|ZP_19339303.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02913]
 gi|429812478|ref|ZP_19344162.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-03439]
 gi|429818000|ref|ZP_19349638.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-04080]
 gi|429823211|ref|ZP_19354806.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-03943]
 gi|429827622|ref|ZP_19358673.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0109]
 gi|429833979|ref|ZP_19364338.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0010]
 gi|429904586|ref|ZP_19370565.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9990]
 gi|429908724|ref|ZP_19374688.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9941]
 gi|429914596|ref|ZP_19380543.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4984]
 gi|429919626|ref|ZP_19385557.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-5604]
 gi|429925446|ref|ZP_19391359.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4986]
 gi|429929382|ref|ZP_19395284.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4987]
 gi|429935921|ref|ZP_19401807.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4988]
 gi|429941601|ref|ZP_19407475.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-5603]
 gi|429944282|ref|ZP_19410144.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-6006]
 gi|429951840|ref|ZP_19417686.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec12-0465]
 gi|429955189|ref|ZP_19421021.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec12-0466]
 gi|432354507|ref|ZP_19597777.1| chaperone ClpB [Escherichia coli KTE2]
 gi|432370814|ref|ZP_19613897.1| chaperone ClpB [Escherichia coli KTE10]
 gi|432377798|ref|ZP_19620787.1| chaperone ClpB [Escherichia coli KTE12]
 gi|432382286|ref|ZP_19625228.1| chaperone ClpB [Escherichia coli KTE15]
 gi|432388263|ref|ZP_19631146.1| chaperone ClpB [Escherichia coli KTE16]
 gi|432389693|ref|ZP_19632563.1| chaperone ClpB [Escherichia coli KTE21]
 gi|432398538|ref|ZP_19641317.1| chaperone ClpB [Escherichia coli KTE25]
 gi|432402856|ref|ZP_19645607.1| chaperone ClpB [Escherichia coli KTE26]
 gi|432407665|ref|ZP_19650372.1| chaperone ClpB [Escherichia coli KTE28]
 gi|432412756|ref|ZP_19655417.1| chaperone ClpB [Escherichia coli KTE39]
 gi|432418069|ref|ZP_19660667.1| chaperone ClpB [Escherichia coli KTE44]
 gi|432422935|ref|ZP_19665478.1| chaperone ClpB [Escherichia coli KTE178]
 gi|432427129|ref|ZP_19669624.1| chaperone ClpB [Escherichia coli KTE181]
 gi|432437314|ref|ZP_19679702.1| chaperone ClpB [Escherichia coli KTE188]
 gi|432442055|ref|ZP_19684394.1| chaperone ClpB [Escherichia coli KTE189]
 gi|432447160|ref|ZP_19689459.1| chaperone ClpB [Escherichia coli KTE191]
 gi|432450725|ref|ZP_19692987.1| chaperone ClpB [Escherichia coli KTE193]
 gi|432457655|ref|ZP_19699836.1| chaperone ClpB [Escherichia coli KTE201]
 gi|432461588|ref|ZP_19703734.1| chaperone ClpB [Escherichia coli KTE204]
 gi|432471922|ref|ZP_19713964.1| chaperone ClpB [Escherichia coli KTE206]
 gi|432476816|ref|ZP_19718811.1| chaperone ClpB [Escherichia coli KTE208]
 gi|432486371|ref|ZP_19728285.1| chaperone ClpB [Escherichia coli KTE212]
 gi|432490359|ref|ZP_19732227.1| chaperone ClpB [Escherichia coli KTE213]
 gi|432496650|ref|ZP_19738446.1| chaperone ClpB [Escherichia coli KTE214]
 gi|432501075|ref|ZP_19742831.1| chaperone ClpB [Escherichia coli KTE216]
 gi|432505394|ref|ZP_19747116.1| chaperone ClpB [Escherichia coli KTE220]
 gi|432514894|ref|ZP_19752116.1| chaperone ClpB [Escherichia coli KTE224]
 gi|432518691|ref|ZP_19755876.1| chaperone ClpB [Escherichia coli KTE228]
 gi|432524788|ref|ZP_19761914.1| chaperone ClpB [Escherichia coli KTE230]
 gi|432527353|ref|ZP_19764443.1| chaperone ClpB [Escherichia coli KTE233]
 gi|432534909|ref|ZP_19771880.1| chaperone ClpB [Escherichia coli KTE234]
 gi|432538812|ref|ZP_19775712.1| chaperone ClpB [Escherichia coli KTE235]
 gi|432544230|ref|ZP_19781071.1| chaperone ClpB [Escherichia coli KTE236]
 gi|432549721|ref|ZP_19786486.1| chaperone ClpB [Escherichia coli KTE237]
 gi|432554637|ref|ZP_19791357.1| chaperone ClpB [Escherichia coli KTE47]
 gi|432559798|ref|ZP_19796466.1| chaperone ClpB [Escherichia coli KTE49]
 gi|432564879|ref|ZP_19801458.1| chaperone ClpB [Escherichia coli KTE51]
 gi|432569677|ref|ZP_19806186.1| chaperone ClpB [Escherichia coli KTE53]
 gi|432576854|ref|ZP_19813309.1| chaperone ClpB [Escherichia coli KTE56]
 gi|432593809|ref|ZP_19830123.1| chaperone ClpB [Escherichia coli KTE60]
 gi|432603220|ref|ZP_19839463.1| chaperone ClpB [Escherichia coli KTE66]
 gi|432608476|ref|ZP_19844660.1| chaperone ClpB [Escherichia coli KTE67]
 gi|432612566|ref|ZP_19848726.1| chaperone ClpB [Escherichia coli KTE72]
 gi|432617786|ref|ZP_19853897.1| chaperone ClpB [Escherichia coli KTE75]
 gi|432622822|ref|ZP_19858849.1| chaperone ClpB [Escherichia coli KTE76]
 gi|432628214|ref|ZP_19864189.1| chaperone ClpB [Escherichia coli KTE77]
 gi|432632352|ref|ZP_19868276.1| chaperone ClpB [Escherichia coli KTE80]
 gi|432637831|ref|ZP_19873699.1| chaperone ClpB [Escherichia coli KTE81]
 gi|432642068|ref|ZP_19877899.1| chaperone ClpB [Escherichia coli KTE83]
 gi|432647119|ref|ZP_19882907.1| chaperone ClpB [Escherichia coli KTE86]
 gi|432652117|ref|ZP_19887869.1| chaperone ClpB [Escherichia coli KTE87]
 gi|432656755|ref|ZP_19892457.1| chaperone ClpB [Escherichia coli KTE93]
 gi|432661801|ref|ZP_19897441.1| chaperone ClpB [Escherichia coli KTE111]
 gi|432667016|ref|ZP_19902595.1| chaperone ClpB [Escherichia coli KTE116]
 gi|432671693|ref|ZP_19907221.1| chaperone ClpB [Escherichia coli KTE119]
 gi|432675714|ref|ZP_19911170.1| chaperone ClpB [Escherichia coli KTE142]
 gi|432681202|ref|ZP_19916574.1| chaperone ClpB [Escherichia coli KTE143]
 gi|432686415|ref|ZP_19921709.1| chaperone ClpB [Escherichia coli KTE156]
 gi|432687799|ref|ZP_19923081.1| chaperone ClpB [Escherichia coli KTE161]
 gi|432695402|ref|ZP_19930599.1| chaperone ClpB [Escherichia coli KTE162]
 gi|432700023|ref|ZP_19935175.1| chaperone ClpB [Escherichia coli KTE169]
 gi|432705369|ref|ZP_19940468.1| chaperone ClpB [Escherichia coli KTE171]
 gi|432706863|ref|ZP_19941944.1| chaperone ClpB [Escherichia coli KTE6]
 gi|432714328|ref|ZP_19949363.1| chaperone ClpB [Escherichia coli KTE8]
 gi|432719738|ref|ZP_19954705.1| chaperone ClpB [Escherichia coli KTE9]
 gi|432724058|ref|ZP_19958975.1| chaperone ClpB [Escherichia coli KTE17]
 gi|432728640|ref|ZP_19963517.1| chaperone ClpB [Escherichia coli KTE18]
 gi|432733331|ref|ZP_19968159.1| chaperone ClpB [Escherichia coli KTE45]
 gi|432738082|ref|ZP_19972837.1| chaperone ClpB [Escherichia coli KTE42]
 gi|432742324|ref|ZP_19977042.1| chaperone ClpB [Escherichia coli KTE23]
 gi|432746588|ref|ZP_19981252.1| chaperone ClpB [Escherichia coli KTE43]
 gi|432751038|ref|ZP_19985639.1| chaperone ClpB [Escherichia coli KTE29]
 gi|432760418|ref|ZP_19994910.1| chaperone ClpB [Escherichia coli KTE46]
 gi|432765952|ref|ZP_20000384.1| chaperone ClpB [Escherichia coli KTE48]
 gi|432771542|ref|ZP_20005867.1| chaperone ClpB [Escherichia coli KTE50]
 gi|432775671|ref|ZP_20009939.1| chaperone ClpB [Escherichia coli KTE54]
 gi|432784507|ref|ZP_20018686.1| chaperone ClpB [Escherichia coli KTE63]
 gi|432793784|ref|ZP_20027867.1| chaperone ClpB [Escherichia coli KTE78]
 gi|432795283|ref|ZP_20029345.1| chaperone ClpB [Escherichia coli KTE79]
 gi|432806777|ref|ZP_20040697.1| chaperone ClpB [Escherichia coli KTE91]
 gi|432810271|ref|ZP_20044150.1| chaperone ClpB [Escherichia coli KTE101]
 gi|432816317|ref|ZP_20050099.1| chaperone ClpB [Escherichia coli KTE115]
 gi|432828237|ref|ZP_20061859.1| chaperone ClpB [Escherichia coli KTE135]
 gi|432835543|ref|ZP_20069080.1| chaperone ClpB [Escherichia coli KTE136]
 gi|432840383|ref|ZP_20073847.1| chaperone ClpB [Escherichia coli KTE140]
 gi|432852575|ref|ZP_20082291.1| chaperone ClpB [Escherichia coli KTE144]
 gi|432863617|ref|ZP_20087499.1| chaperone ClpB [Escherichia coli KTE146]
 gi|432869988|ref|ZP_20090520.1| chaperone ClpB [Escherichia coli KTE147]
 gi|432876455|ref|ZP_20094373.1| chaperone ClpB [Escherichia coli KTE154]
 gi|432887649|ref|ZP_20101620.1| chaperone ClpB [Escherichia coli KTE158]
 gi|432905953|ref|ZP_20114717.1| chaperone ClpB [Escherichia coli KTE194]
 gi|432913821|ref|ZP_20119441.1| chaperone ClpB [Escherichia coli KTE190]
 gi|432920561|ref|ZP_20124196.1| chaperone ClpB [Escherichia coli KTE173]
 gi|432928158|ref|ZP_20129411.1| chaperone ClpB [Escherichia coli KTE175]
 gi|432935499|ref|ZP_20134840.1| chaperone ClpB [Escherichia coli KTE184]
 gi|432938973|ref|ZP_20137175.1| chaperone ClpB [Escherichia coli KTE183]
 gi|432948540|ref|ZP_20143591.1| chaperone ClpB [Escherichia coli KTE196]
 gi|432956173|ref|ZP_20147961.1| chaperone ClpB [Escherichia coli KTE197]
 gi|432962917|ref|ZP_20152387.1| chaperone ClpB [Escherichia coli KTE202]
 gi|432968667|ref|ZP_20157581.1| chaperone ClpB [Escherichia coli KTE203]
 gi|432972748|ref|ZP_20161613.1| chaperone ClpB [Escherichia coli KTE207]
 gi|432974744|ref|ZP_20163580.1| chaperone ClpB [Escherichia coli KTE209]
 gi|432981962|ref|ZP_20170736.1| chaperone ClpB [Escherichia coli KTE211]
 gi|432986307|ref|ZP_20175027.1| chaperone ClpB [Escherichia coli KTE215]
 gi|432991689|ref|ZP_20180353.1| chaperone ClpB [Escherichia coli KTE217]
 gi|432996299|ref|ZP_20184884.1| chaperone ClpB [Escherichia coli KTE218]
 gi|433000870|ref|ZP_20189393.1| chaperone ClpB [Escherichia coli KTE223]
 gi|433014869|ref|ZP_20203210.1| chaperone ClpB [Escherichia coli KTE104]
 gi|433019661|ref|ZP_20207852.1| chaperone ClpB [Escherichia coli KTE105]
 gi|433024443|ref|ZP_20212423.1| chaperone ClpB [Escherichia coli KTE106]
 gi|433034423|ref|ZP_20222130.1| chaperone ClpB [Escherichia coli KTE112]
 gi|433039594|ref|ZP_20227191.1| chaperone ClpB [Escherichia coli KTE113]
 gi|433044141|ref|ZP_20231634.1| chaperone ClpB [Escherichia coli KTE117]
 gi|433049008|ref|ZP_20236353.1| chaperone ClpB [Escherichia coli KTE120]
 gi|433054235|ref|ZP_20241407.1| chaperone ClpB [Escherichia coli KTE122]
 gi|433059078|ref|ZP_20246119.1| chaperone ClpB [Escherichia coli KTE124]
 gi|433064032|ref|ZP_20250948.1| chaperone ClpB [Escherichia coli KTE125]
 gi|433068881|ref|ZP_20255665.1| chaperone ClpB [Escherichia coli KTE128]
 gi|433078767|ref|ZP_20265293.1| chaperone ClpB [Escherichia coli KTE131]
 gi|433083503|ref|ZP_20269958.1| chaperone ClpB [Escherichia coli KTE133]
 gi|433088277|ref|ZP_20274645.1| chaperone ClpB [Escherichia coli KTE137]
 gi|433092963|ref|ZP_20279226.1| chaperone ClpB [Escherichia coli KTE138]
 gi|433097404|ref|ZP_20283586.1| chaperone ClpB [Escherichia coli KTE139]
 gi|433102131|ref|ZP_20288209.1| chaperone ClpB [Escherichia coli KTE145]
 gi|433106848|ref|ZP_20292819.1| chaperone ClpB [Escherichia coli KTE148]
 gi|433111824|ref|ZP_20297684.1| chaperone ClpB [Escherichia coli KTE150]
 gi|433116482|ref|ZP_20302270.1| chaperone ClpB [Escherichia coli KTE153]
 gi|433126152|ref|ZP_20311706.1| chaperone ClpB [Escherichia coli KTE160]
 gi|433131132|ref|ZP_20316565.1| chaperone ClpB [Escherichia coli KTE163]
 gi|433135799|ref|ZP_20321139.1| chaperone ClpB [Escherichia coli KTE166]
 gi|433140220|ref|ZP_20325472.1| chaperone ClpB [Escherichia coli KTE167]
 gi|433145192|ref|ZP_20330332.1| chaperone ClpB [Escherichia coli KTE168]
 gi|433150138|ref|ZP_20335154.1| chaperone ClpB [Escherichia coli KTE174]
 gi|433159637|ref|ZP_20344470.1| chaperone ClpB [Escherichia coli KTE177]
 gi|433174494|ref|ZP_20359012.1| chaperone ClpB [Escherichia coli KTE232]
 gi|433179426|ref|ZP_20363819.1| chaperone ClpB [Escherichia coli KTE82]
 gi|433189331|ref|ZP_20373426.1| chaperone ClpB [Escherichia coli KTE88]
 gi|433194648|ref|ZP_20378632.1| chaperone ClpB [Escherichia coli KTE90]
 gi|433199300|ref|ZP_20383194.1| chaperone ClpB [Escherichia coli KTE94]
 gi|433204261|ref|ZP_20388026.1| chaperone ClpB [Escherichia coli KTE95]
 gi|433213500|ref|ZP_20397089.1| chaperone ClpB [Escherichia coli KTE99]
 gi|433323021|ref|ZP_20400391.1| protein disaggregation chaperone [Escherichia coli J96]
 gi|433327005|ref|ZP_20403638.1| protein disaggregation chaperone [Escherichia coli J96]
 gi|442590621|ref|ZP_21009382.1| ClpB protein [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
 gi|442599575|ref|ZP_21017288.1| ClpB protein [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
 gi|442604746|ref|ZP_21019590.1| ClpB protein [Escherichia coli Nissle 1917]
 gi|443618647|ref|YP_007382503.1| protein disaggregation chaperone [Escherichia coli APEC O78]
 gi|444926153|ref|ZP_21245453.1| ATP-dependent chaperone protein ClpB [Escherichia coli 09BKT078844]
 gi|444931860|ref|ZP_21250904.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0814]
 gi|444937311|ref|ZP_21256091.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0815]
 gi|444942940|ref|ZP_21261461.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0816]
 gi|444948426|ref|ZP_21266740.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0839]
 gi|444953971|ref|ZP_21272070.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0848]
 gi|444959494|ref|ZP_21277350.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1753]
 gi|444964602|ref|ZP_21282213.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1775]
 gi|444970627|ref|ZP_21287993.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1793]
 gi|444975912|ref|ZP_21293039.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1805]
 gi|444981297|ref|ZP_21298211.1| ATP-dependent chaperone protein ClpB [Escherichia coli ATCC 700728]
 gi|444986692|ref|ZP_21303476.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA11]
 gi|444992006|ref|ZP_21308652.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA19]
 gi|444997317|ref|ZP_21313817.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA13]
 gi|445002889|ref|ZP_21319281.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA2]
 gi|445008328|ref|ZP_21324570.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA47]
 gi|445013419|ref|ZP_21329529.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA48]
 gi|445019288|ref|ZP_21335256.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA8]
 gi|445024702|ref|ZP_21340529.1| ATP-dependent chaperone protein ClpB [Escherichia coli 7.1982]
 gi|445030078|ref|ZP_21345756.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1781]
 gi|445035545|ref|ZP_21351080.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1762]
 gi|445041170|ref|ZP_21356546.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA35]
 gi|445046399|ref|ZP_21361652.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.4880]
 gi|445051913|ref|ZP_21366962.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0083]
 gi|445057684|ref|ZP_21372545.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0670]
 gi|450220041|ref|ZP_21896286.1| protein disaggregation chaperone [Escherichia coli O08]
 gi|450247072|ref|ZP_21901086.1| protein disaggregation chaperone [Escherichia coli S17]
 gi|452967749|ref|ZP_21965976.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
           EC4009]
 gi|54036848|sp|P63284.1|CLPB_ECOLI RecName: Full=Chaperone protein ClpB; AltName: Full=Heat shock
           protein F84.1
 gi|54036849|sp|P63285.1|CLPB_ECO57 RecName: Full=Chaperone protein ClpB
 gi|54036850|sp|P63286.1|CLPB_ECOL6 RecName: Full=Chaperone protein ClpB
 gi|1788943|gb|AAC75641.1| protein disaggregation chaperone [Escherichia coli str. K-12
           substr. MG1655]
 gi|1799995|dbj|BAA16476.1| protein disaggregation chaperone [Escherichia coli str. K12 substr.
           W3110]
 gi|13362926|dbj|BAB36878.1| heat shock protein [Escherichia coli O157:H7 str. Sakai]
 gi|73856628|gb|AAZ89335.1| heat shock protein [Shigella sonnei Ss046]
 gi|81246456|gb|ABB67164.1| heat shock protein [Shigella boydii Sb227]
 gi|110344347|gb|ABG70584.1| ClpB protein [Escherichia coli 536]
 gi|157067748|gb|ABV07003.1| ATP-dependent chaperone protein ClpB [Escherichia coli HS]
 gi|157080262|gb|ABV19970.1| ATP-dependent chaperone protein ClpB [Escherichia coli E24377A]
 gi|169754057|gb|ACA76756.1| ATP-dependent chaperone ClpB [Escherichia coli ATCC 8739]
 gi|169890032|gb|ACB03739.1| protein disaggregation chaperone [Escherichia coli str. K-12
           substr. DH10B]
 gi|170521698|gb|ACB19876.1| ATP-dependent chaperone protein ClpB [Escherichia coli SMS-3-5]
 gi|187770676|gb|EDU34520.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4196]
 gi|188014008|gb|EDU52130.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4113]
 gi|188487823|gb|EDU62926.1| ATP-dependent chaperone protein ClpB [Escherichia coli 53638]
 gi|189003333|gb|EDU72319.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4076]
 gi|189354548|gb|EDU72967.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4401]
 gi|189359601|gb|EDU78020.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4486]
 gi|189367288|gb|EDU85704.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4501]
 gi|189370894|gb|EDU89310.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC869]
 gi|189376181|gb|EDU94597.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC508]
 gi|190900892|gb|EDV60678.1| ATP-dependent chaperone protein ClpB [Escherichia coli B7A]
 gi|190905142|gb|EDV64786.1| ATP-dependent chaperone protein ClpB [Escherichia coli F11]
 gi|192929286|gb|EDV82895.1| ATP-dependent chaperone protein ClpB [Escherichia coli E22]
 gi|194411789|gb|EDX28110.1| ATP-dependent chaperone protein ClpB [Escherichia coli B171]
 gi|194421696|gb|EDX37705.1| ATP-dependent chaperone protein ClpB [Escherichia coli 101-1]
 gi|208725798|gb|EDZ75399.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4206]
 gi|208734329|gb|EDZ83016.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4045]
 gi|208739428|gb|EDZ87110.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4042]
 gi|209159195|gb|ACI36628.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str. EC4115]
 gi|209913328|dbj|BAG78402.1| ATP-dependent protease [Escherichia coli SE11]
 gi|215266003|emb|CAS10414.1| protein disaggregation chaperone [Escherichia coli O127:H6 str.
           E2348/69]
 gi|217319111|gb|EEC27536.1| ATP-dependent chaperone ClpB [Escherichia coli O157:H7 str.
           TW14588]
 gi|218352949|emb|CAU98748.1| protein disaggregation chaperone [Escherichia coli 55989]
 gi|218361940|emb|CAQ99542.1| protein disaggregation chaperone [Escherichia coli IAI1]
 gi|218371090|emb|CAR18919.1| protein disaggregation chaperone [Escherichia coli IAI39]
 gi|218428275|emb|CAR09200.2| protein disaggregation chaperone [Escherichia coli ED1a]
 gi|218433191|emb|CAR14090.1| protein disaggregation chaperone [Escherichia coli UMN026]
 gi|238863301|gb|ACR65299.1| protein disaggregation chaperone [Escherichia coli BW2952]
 gi|242378188|emb|CAQ32963.1| ClpB chaperone [Escherichia coli BL21(DE3)]
 gi|253323556|gb|ACT28158.1| ATP-dependent chaperone ClpB [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253974464|gb|ACT40135.1| protein disaggregation chaperone [Escherichia coli B str. REL606]
 gi|253978631|gb|ACT44301.1| protein disaggregation chaperone [Escherichia coli BL21(DE3)]
 gi|254593940|gb|ACT73301.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
           TW14359]
 gi|257755331|dbj|BAI26833.1| protein disaggregation chaperone ClpB [Escherichia coli O26:H11
           str. 11368]
 gi|257760421|dbj|BAI31918.1| protein disaggregation chaperone ClpB [Escherichia coli O103:H2
           str. 12009]
 gi|257765630|dbj|BAI37125.1| protein disaggregation chaperone ClpB [Escherichia coli O111:H-
           str. 11128]
 gi|260448332|gb|ACX38754.1| ATP-dependent chaperone ClpB [Escherichia coli DH1]
 gi|281179640|dbj|BAI55970.1| ATP-dependent protease [Escherichia coli SE15]
 gi|284922540|emb|CBG35627.1| chaperone (heat-shock protein F84.1) [Escherichia coli 042]
 gi|299880532|gb|EFI88743.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 196-1]
 gi|305854526|gb|EFM54964.1| protein disaggregation chaperone [Escherichia coli NC101]
 gi|306905523|gb|EFN36057.1| ATP-dependent chaperone ClpB [Escherichia coli W]
 gi|307554607|gb|ADN47382.1| ATP-dependent chaperone protein ClpB [Escherichia coli ABU 83972]
 gi|309702974|emb|CBJ02305.1| chaperone (heat-shock protein F84.1) [Escherichia coli ETEC H10407]
 gi|312289927|gb|EFR17815.1| ATP-dependent chaperone ClpB [Escherichia coli 2362-75]
 gi|315061907|gb|ADT76234.1| protein disaggregation chaperone [Escherichia coli W]
 gi|315137212|dbj|BAJ44371.1| heat shock protein [Escherichia coli DH1]
 gi|315615333|gb|EFU95967.1| ATP-dependent chaperone ClpB [Escherichia coli 3431]
 gi|320177085|gb|EFW52102.1| ClpB protein [Shigella dysenteriae CDC 74-1112]
 gi|320182491|gb|EFW57385.1| ClpB protein [Shigella boydii ATCC 9905]
 gi|320185012|gb|EFW59794.1| ClpB protein [Shigella flexneri CDC 796-83]
 gi|320188931|gb|EFW63590.1| ClpB protein [Escherichia coli O157:H7 str. EC1212]
 gi|320194759|gb|EFW69388.1| ClpB protein [Escherichia coli WV_060327]
 gi|320198369|gb|EFW72971.1| ClpB protein [Escherichia coli EC4100B]
 gi|320640776|gb|EFX10274.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
           G5101]
 gi|320646121|gb|EFX15066.1| protein disaggregation chaperone [Escherichia coli O157:H- str.
           493-89]
 gi|320651418|gb|EFX19819.1| protein disaggregation chaperone [Escherichia coli O157:H- str. H
           2687]
 gi|320657023|gb|EFX24846.1| protein disaggregation chaperone [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320662687|gb|EFX30031.1| protein disaggregation chaperone [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320667504|gb|EFX34428.1| protein disaggregation chaperone [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323156248|gb|EFZ42407.1| ATP-dependent chaperone ClpB [Escherichia coli EPECa14]
 gi|323177280|gb|EFZ62868.1| ATP-dependent chaperone ClpB [Escherichia coli OK1180]
 gi|323184531|gb|EFZ69905.1| ATP-dependent chaperone ClpB [Escherichia coli OK1357]
 gi|323377512|gb|ADX49780.1| ATP-dependent chaperone ClpB [Escherichia coli KO11FL]
 gi|323935612|gb|EGB31932.1| ATP-dependent chaperone ClpB [Escherichia coli E1520]
 gi|323941388|gb|EGB37572.1| ATP-dependent chaperone ClpB [Escherichia coli E482]
 gi|323946279|gb|EGB42312.1| ATP-dependent chaperone ClpB [Escherichia coli H120]
 gi|323960548|gb|EGB56177.1| ATP-dependent chaperone ClpB [Escherichia coli H489]
 gi|323963902|gb|EGB59395.1| ATP-dependent chaperone ClpB [Escherichia coli M863]
 gi|324120051|gb|EGC13927.1| ATP-dependent chaperone ClpB [Escherichia coli E1167]
 gi|325496334|gb|EGC94193.1| protein disaggregation chaperone [Escherichia fergusonii ECD227]
 gi|326344348|gb|EGD68106.1| ClpB protein [Escherichia coli O157:H7 str. 1125]
 gi|326347717|gb|EGD71434.1| ClpB protein [Escherichia coli O157:H7 str. 1044]
 gi|327252298|gb|EGE63970.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_7v]
 gi|330912357|gb|EGH40867.1| ClpB protein [Escherichia coli AA86]
 gi|331058616|gb|EGI30594.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA143]
 gi|331063012|gb|EGI34925.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA271]
 gi|331068775|gb|EGI40168.1| ATP-dependent chaperone protein ClpB [Escherichia coli TA280]
 gi|332344463|gb|AEE57797.1| ATP-dependent chaperone ClpB [Escherichia coli UMNK88]
 gi|333001158|gb|EGK20728.1| ATP-dependent chaperone ClpB [Shigella flexneri K-272]
 gi|333015796|gb|EGK35133.1| ATP-dependent chaperone ClpB [Shigella flexneri K-227]
 gi|333970692|gb|AEG37497.1| ClpB protein [Escherichia coli NA114]
 gi|339416185|gb|AEJ57857.1| ATP-dependent chaperone ClpB [Escherichia coli UMNF18]
 gi|340733532|gb|EGR62663.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
           01-09591]
 gi|340739435|gb|EGR73670.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
           LB226692]
 gi|342364116|gb|EGU28218.1| protein disaggregation chaperone [Escherichia coli XH140A]
 gi|344192237|gb|EGV46333.1| protein disaggregation chaperone [Escherichia coli XH001]
 gi|345334599|gb|EGW67041.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_C165-02]
 gi|345337104|gb|EGW69537.1| ATP-dependent chaperone ClpB [Escherichia coli 2534-86]
 gi|345349284|gb|EGW81571.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_94C]
 gi|345352423|gb|EGW84672.1| ATP-dependent chaperone ClpB [Escherichia coli 3030-1]
 gi|345357537|gb|EGW89731.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_DG131-3]
 gi|345361095|gb|EGW93256.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_EH250]
 gi|345369763|gb|EGX01744.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_MHI813]
 gi|345374492|gb|EGX06443.1| ATP-dependent chaperone ClpB [Escherichia coli G58-1]
 gi|345386438|gb|EGX16271.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_S1191]
 gi|345392748|gb|EGX22527.1| ATP-dependent chaperone ClpB [Escherichia coli TX1999]
 gi|349739066|gb|AEQ13772.1| protein disaggregation chaperone [Escherichia coli O7:K1 str. CE10]
 gi|354862441|gb|EHF22879.1| chaperone ClpB [Escherichia coli O104:H4 str. C236-11]
 gi|354867725|gb|EHF28147.1| chaperone ClpB [Escherichia coli O104:H4 str. C227-11]
 gi|354868123|gb|EHF28541.1| chaperone ClpB [Escherichia coli O104:H4 str. 04-8351]
 gi|354873722|gb|EHF34099.1| chaperone ClpB [Escherichia coli O104:H4 str. 09-7901]
 gi|354880406|gb|EHF40742.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-3677]
 gi|354888530|gb|EHF48786.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4404]
 gi|354892691|gb|EHF52897.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4522]
 gi|354893758|gb|EHF53957.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C1]
 gi|354896838|gb|EHF57005.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4623]
 gi|354898532|gb|EHF58686.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C2]
 gi|354912300|gb|EHF72301.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C5]
 gi|354915256|gb|EHF75236.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C3]
 gi|354917144|gb|EHF77113.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-4632 C4]
 gi|359332897|dbj|BAL39344.1| protein disaggregation chaperone [Escherichia coli str. K-12
           substr. MDS42]
 gi|371592087|gb|EHN81009.1| chaperone ClpB [Escherichia coli H494]
 gi|371606808|gb|EHN95399.1| chaperone ClpB [Escherichia coli E101]
 gi|371615394|gb|EHO03800.1| chaperone ClpB [Escherichia coli B093]
 gi|374359951|gb|AEZ41658.1| protein disaggregation chaperone [Escherichia coli O55:H7 str.
           RM12579]
 gi|375320531|gb|EHS66474.1| protein disaggregation chaperone [Escherichia coli O157:H43 str.
           T22]
 gi|377842710|gb|EHU07760.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1A]
 gi|377842992|gb|EHU08035.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1C]
 gi|377846545|gb|EHU11556.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1B]
 gi|377855963|gb|EHU20825.1| ATP-dependent chaperone ClpB [Escherichia coli DEC1D]
 gi|377862695|gb|EHU27503.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2A]
 gi|377876581|gb|EHU41181.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2C]
 gi|377889074|gb|EHU53541.1| ATP-dependent chaperone ClpB [Escherichia coli DEC2E]
 gi|377894379|gb|EHU58801.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3A]
 gi|377903360|gb|EHU67656.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3B]
 gi|377903368|gb|EHU67661.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3D]
 gi|377910932|gb|EHU75115.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3C]
 gi|377911230|gb|EHU75404.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3E]
 gi|377924761|gb|EHU88702.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4A]
 gi|377926892|gb|EHU90819.1| ATP-dependent chaperone ClpB [Escherichia coli DEC3F]
 gi|377935034|gb|EHU98857.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4B]
 gi|377938729|gb|EHV02494.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4C]
 gi|377941241|gb|EHV04985.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4D]
 gi|377946132|gb|EHV09819.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4E]
 gi|377952146|gb|EHV15747.1| ATP-dependent chaperone ClpB [Escherichia coli DEC4F]
 gi|377965090|gb|EHV28518.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5B]
 gi|377973637|gb|EHV36974.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5C]
 gi|377974765|gb|EHV38091.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5D]
 gi|377982172|gb|EHV45424.1| ATP-dependent chaperone ClpB [Escherichia coli DEC5E]
 gi|377991404|gb|EHV54555.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6B]
 gi|377993350|gb|EHV56487.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6A]
 gi|377995518|gb|EHV58634.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6C]
 gi|378006522|gb|EHV69500.1| ATP-dependent chaperone ClpB [Escherichia coli DEC6D]
 gi|378015305|gb|EHV78202.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7A]
 gi|378022804|gb|EHV85487.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7C]
 gi|378027627|gb|EHV90253.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7D]
 gi|378031946|gb|EHV94528.1| ATP-dependent chaperone ClpB [Escherichia coli DEC7B]
 gi|378039355|gb|EHW01848.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8A]
 gi|378052270|gb|EHW14579.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8C]
 gi|378052552|gb|EHW14856.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8B]
 gi|378074646|gb|EHW36679.1| ATP-dependent chaperone ClpB [Escherichia coli DEC8E]
 gi|378076171|gb|EHW38183.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9B]
 gi|378083065|gb|EHW45001.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9C]
 gi|378093516|gb|EHW55322.1| ATP-dependent chaperone ClpB [Escherichia coli DEC9E]
 gi|378099275|gb|EHW60983.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10A]
 gi|378104890|gb|EHW66542.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10B]
 gi|378115525|gb|EHW77064.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10D]
 gi|378128356|gb|EHW89738.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11A]
 gi|378129125|gb|EHW90501.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10E]
 gi|378130260|gb|EHW91628.1| ATP-dependent chaperone ClpB [Escherichia coli DEC10F]
 gi|378140640|gb|EHX01863.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11B]
 gi|378147456|gb|EHX08603.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11D]
 gi|378157016|gb|EHX18060.1| ATP-dependent chaperone ClpB [Escherichia coli DEC11E]
 gi|378164351|gb|EHX25297.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12B]
 gi|378168579|gb|EHX29483.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12A]
 gi|378168939|gb|EHX29840.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12C]
 gi|378180553|gb|EHX41234.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12D]
 gi|378185028|gb|EHX45660.1| ATP-dependent chaperone ClpB [Escherichia coli DEC13A]
 gi|378187001|gb|EHX47621.1| ATP-dependent chaperone ClpB [Escherichia coli DEC12E]
 gi|378215991|gb|EHX76281.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14A]
 gi|378218075|gb|EHX78347.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14B]
 gi|378227090|gb|EHX87267.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14C]
 gi|378230377|gb|EHX90496.1| ATP-dependent chaperone ClpB [Escherichia coli DEC14D]
 gi|378236556|gb|EHX96601.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15A]
 gi|378243815|gb|EHY03761.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15B]
 gi|378252827|gb|EHY12705.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15D]
 gi|378258568|gb|EHY18385.1| ATP-dependent chaperone ClpB [Escherichia coli DEC15E]
 gi|380347350|gb|EIA35638.1| protein disaggregation chaperone [Escherichia coli SCI-07]
 gi|383104021|gb|AFG41530.1| Chaperone protein clpB [Escherichia coli P12b]
 gi|383391992|gb|AFH16950.1| protein disaggregation chaperone [Escherichia coli KO11FL]
 gi|383406171|gb|AFH12414.1| protein disaggregation chaperone [Escherichia coli W]
 gi|384380825|gb|EIE38691.1| ATP-dependent chaperone protein ClpB [Escherichia coli J53]
 gi|384470764|gb|EIE54862.1| protein disaggregation chaperone [Escherichia coli AI27]
 gi|385537254|gb|EIF84136.1| chaperone ClpB [Escherichia coli M919]
 gi|385707147|gb|EIG44179.1| chaperone ClpB [Escherichia coli H730]
 gi|385711187|gb|EIG48147.1| chaperone ClpB [Escherichia coli B799]
 gi|386121213|gb|EIG69830.1| chaperone ClpB [Escherichia sp. 4_1_40B]
 gi|386140943|gb|EIG82095.1| ATP-dependent chaperone protein ClpB [Escherichia coli 1.2741]
 gi|386147873|gb|EIG94313.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0246]
 gi|386153382|gb|EIH04671.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.0588]
 gi|386160309|gb|EIH22120.1| ATP-dependent chaperone protein ClpB [Escherichia coli 1.2264]
 gi|386167684|gb|EIH34200.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0497]
 gi|386171607|gb|EIH43646.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0741]
 gi|386177531|gb|EIH55010.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.2608]
 gi|386183017|gb|EIH65768.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0624]
 gi|386192481|gb|EIH81205.1| ATP-dependent chaperone protein ClpB [Escherichia coli 4.0522]
 gi|386194077|gb|EIH88338.1| ATP-dependent chaperone protein ClpB [Escherichia coli JB1-95]
 gi|386201951|gb|EII00942.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.154]
 gi|386204519|gb|EII09030.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.0959]
 gi|386218201|gb|EII34684.1| ATP-dependent chaperone protein ClpB [Escherichia coli 4.0967]
 gi|386224215|gb|EII46558.1| ATP-dependent chaperone protein ClpB [Escherichia coli 2.3916]
 gi|386227619|gb|EII54975.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.3884]
 gi|386236503|gb|EII68479.1| ATP-dependent chaperone protein ClpB [Escherichia coli 2.4168]
 gi|386254601|gb|EIJ04291.1| ATP-dependent chaperone protein ClpB [Escherichia coli B41]
 gi|386256623|gb|EIJ12117.1| ATP-dependent chaperone protein ClpB [Escherichia coli 900105
           (10e)]
 gi|388334874|gb|EIL01454.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
           CVM9534]
 gi|388335556|gb|EIL02116.1| protein disaggregation chaperone [Escherichia coli O103:H2 str.
           CVM9450]
 gi|388336442|gb|EIL02985.1| protein disaggregation chaperone [Escherichia coli O103:H25 str.
           CVM9340]
 gi|388354959|gb|EIL19831.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
           CVM9574]
 gi|388361811|gb|EIL25885.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
           CVM9570]
 gi|388366891|gb|EIL30600.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
           CVM9545]
 gi|388368482|gb|EIL32113.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
           CVM9942]
 gi|388379915|gb|EIL42545.1| heat shock protein [Escherichia coli O26:H11 str. CVM10026]
 gi|388397947|gb|EIL58901.1| protein disaggregation chaperone [Escherichia coli 541-15]
 gi|388406100|gb|EIL66511.1| protein disaggregation chaperone [Escherichia coli 75]
 gi|388408493|gb|EIL68837.1| protein disaggregation chaperone [Escherichia coli 576-1]
 gi|388421160|gb|EIL80781.1| protein disaggregation chaperone [Escherichia coli CUMT8]
 gi|390640873|gb|EIN20317.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1996]
 gi|390642395|gb|EIN21793.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA517]
 gi|390643356|gb|EIN22710.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA505]
 gi|390659773|gb|EIN37521.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93-001]
 gi|390661066|gb|EIN38738.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1985]
 gi|390662860|gb|EIN40396.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1990]
 gi|390676582|gb|EIN52672.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA3]
 gi|390679827|gb|EIN55693.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA5]
 gi|390683118|gb|EIN58832.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA9]
 gi|390695597|gb|EIN70116.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA10]
 gi|390700139|gb|EIN74460.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA15]
 gi|390700597|gb|EIN74890.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA14]
 gi|390713745|gb|EIN86673.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA22]
 gi|390721880|gb|EIN94573.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA25]
 gi|390723387|gb|EIN95983.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA24]
 gi|390726355|gb|EIN98805.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA28]
 gi|390741481|gb|EIO12548.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA31]
 gi|390741941|gb|EIO12968.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA32]
 gi|390744542|gb|EIO15398.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA33]
 gi|390757407|gb|EIO26891.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA40]
 gi|390766404|gb|EIO35526.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA41]
 gi|390767719|gb|EIO36786.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA39]
 gi|390768138|gb|EIO37181.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA42]
 gi|390780798|gb|EIO48492.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW06591]
 gi|390786853|gb|EIO54355.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW10246]
 gi|390789740|gb|EIO57184.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW07945]
 gi|390802310|gb|EIO69351.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW11039]
 gi|390804600|gb|EIO71558.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09098]
 gi|390807166|gb|EIO74068.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09109]
 gi|390815319|gb|EIO81854.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW10119]
 gi|390825299|gb|EIO91234.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4203]
 gi|390829325|gb|EIO94927.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW09195]
 gi|390830191|gb|EIO95751.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4196]
 gi|390845553|gb|EIP09187.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW14301]
 gi|390845736|gb|EIP09363.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW14313]
 gi|390850018|gb|EIP13414.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4421]
 gi|390870013|gb|EIP31586.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4402]
 gi|390877881|gb|EIP38772.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4439]
 gi|390883127|gb|EIP43584.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4436]
 gi|390892599|gb|EIP52174.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4437]
 gi|390895117|gb|EIP54598.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC4448]
 gi|390897356|gb|EIP56691.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1738]
 gi|390907430|gb|EIP66293.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1734]
 gi|390918506|gb|EIP76903.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1863]
 gi|390919698|gb|EIP78023.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1845]
 gi|391283665|gb|EIQ42280.1| ATP-dependent chaperone ClpB [Shigella sonnei 3233-85]
 gi|391304571|gb|EIQ62380.1| ATP-dependent chaperone ClpB [Escherichia coli EPECa12]
 gi|394383682|gb|EJE61272.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
           CVM9602]
 gi|394384190|gb|EJE61757.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
           CVM10224]
 gi|394399883|gb|EJE75853.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
           CVM9634]
 gi|394400710|gb|EJE76622.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
           CVM9553]
 gi|394402890|gb|EJE78574.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
           CVM10021]
 gi|394408132|gb|EJE82854.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
           CVM9455]
 gi|394414750|gb|EJE88672.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
           CVM10030]
 gi|394420119|gb|EJE93671.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
           CVM9952]
 gi|397784398|gb|EJK95252.1| ATP-dependent chaperone ClpB [Escherichia coli STEC_O31]
 gi|397898400|gb|EJL14784.1| ATP-dependent chaperone ClpB [Shigella sonnei str. Moseley]
 gi|404290464|gb|EEH71314.2| chaperone ClpB [Escherichia sp. 1_1_43]
 gi|406776579|gb|AFS56003.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
           2009EL-2050]
 gi|407053148|gb|AFS73199.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
           2011C-3493]
 gi|407066522|gb|AFS87569.1| protein disaggregation chaperone [Escherichia coli O104:H4 str.
           2009EL-2071]
 gi|408065418|gb|EKG99892.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA7]
 gi|408066055|gb|EKH00519.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK920]
 gi|408078498|gb|EKH12650.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA506]
 gi|408082392|gb|EKH16375.1| ATP-dependent chaperone protein ClpB [Escherichia coli FDA507]
 gi|408096980|gb|EKH29894.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1999]
 gi|408103486|gb|EKH35832.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK1997]
 gi|408108044|gb|EKH40082.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE1487]
 gi|408120379|gb|EKH51376.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK2001]
 gi|408126922|gb|EKH57449.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA4]
 gi|408137165|gb|EKH66879.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA23]
 gi|408139500|gb|EKH69110.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA49]
 gi|408145583|gb|EKH74742.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA45]
 gi|408154477|gb|EKH82818.1| ATP-dependent chaperone protein ClpB [Escherichia coli TT12B]
 gi|408159346|gb|EKH87418.1| ATP-dependent chaperone protein ClpB [Escherichia coli MA6]
 gi|408163120|gb|EKH91000.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5905]
 gi|408172759|gb|EKH99813.1| ATP-dependent chaperone protein ClpB [Escherichia coli CB7326]
 gi|408179519|gb|EKI06179.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC96038]
 gi|408182301|gb|EKI08817.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5412]
 gi|408192674|gb|EKI18244.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW15901]
 gi|408201192|gb|EKI26354.1| ATP-dependent chaperone protein ClpB [Escherichia coli TW00353]
 gi|408217080|gb|EKI41366.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA38]
 gi|408226599|gb|EKI50233.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1735]
 gi|408227563|gb|EKI51146.1| ATP-dependent chaperone protein ClpB [Escherichia coli N1]
 gi|408241828|gb|EKI64439.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1737]
 gi|408246116|gb|EKI68425.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1846]
 gi|408254867|gb|EKI76335.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1847]
 gi|408258402|gb|EKI79668.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1848]
 gi|408264914|gb|EKI85679.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1849]
 gi|408273621|gb|EKI93673.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1850]
 gi|408276539|gb|EKI96438.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1856]
 gi|408285691|gb|EKJ04683.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1862]
 gi|408290482|gb|EKJ09195.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1864]
 gi|408295458|gb|EKJ13772.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1865]
 gi|408303668|gb|EKJ21122.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1868]
 gi|408307246|gb|EKJ24589.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1866]
 gi|408318093|gb|EKJ34309.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1869]
 gi|408324292|gb|EKJ40226.1| ATP-dependent chaperone protein ClpB [Escherichia coli EC1870]
 gi|408325685|gb|EKJ41541.1| ATP-dependent chaperone protein ClpB [Escherichia coli NE098]
 gi|408335945|gb|EKJ50755.1| ATP-dependent chaperone protein ClpB [Escherichia coli FRIK523]
 gi|408342856|gb|EKJ57270.1| ATP-dependent chaperone protein ClpB [Escherichia coli 0.1288]
 gi|408345643|gb|EKJ59958.1| ATP-dependent chaperone protein ClpB [Escherichia coli 0.1304]
 gi|408456596|gb|EKJ80409.1| protein disaggregation chaperone [Escherichia coli AD30]
 gi|408545467|gb|EKK22897.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.4870]
 gi|408549014|gb|EKK26382.1| ATP-dependent chaperone protein ClpB [Escherichia coli 5.2239]
 gi|408567358|gb|EKK43417.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0566]
 gi|408568063|gb|EKK44102.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0569]
 gi|408568197|gb|EKK44234.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0586]
 gi|408578176|gb|EKK53705.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0833]
 gi|408580682|gb|EKK56069.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.2524]
 gi|408590902|gb|EKK65363.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0869]
 gi|408595822|gb|EKK70028.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.0221]
 gi|408600548|gb|EKK74389.1| ATP-dependent chaperone protein ClpB [Escherichia coli 8.0416]
 gi|408612015|gb|EKK85363.1| ATP-dependent chaperone protein ClpB [Escherichia coli 10.0821]
 gi|412963953|emb|CCK47879.1| heat shock protein [Escherichia coli chi7122]
 gi|412970446|emb|CCJ45092.1| heat shock protein [Escherichia coli]
 gi|421936383|gb|EKT94047.1| protein disaggregation chaperone [Escherichia coli O111:H8 str.
           CFSAN001632]
 gi|421939968|gb|EKT97456.1| protein disaggregation chaperone [Escherichia coli O26:H11 str.
           CFSAN001629]
 gi|421944373|gb|EKU01633.1| protein disaggregation chaperone [Escherichia coli O111:H11 str.
           CFSAN001630]
 gi|427204151|gb|EKV74434.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.1042]
 gi|427206034|gb|EKV76261.1| ATP-dependent chaperone protein ClpB [Escherichia coli 89.0511]
 gi|427208023|gb|EKV78176.1| ATP-dependent chaperone protein ClpB [Escherichia coli 88.1467]
 gi|427220326|gb|EKV89252.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.0091]
 gi|427223700|gb|EKV92431.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.2281]
 gi|427227468|gb|EKV96019.1| ATP-dependent chaperone protein ClpB [Escherichia coli 90.0039]
 gi|427241215|gb|EKW08657.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0056]
 gi|427241593|gb|EKW09019.1| ATP-dependent chaperone protein ClpB [Escherichia coli 93.0055]
 gi|427245213|gb|EKW12509.1| ATP-dependent chaperone protein ClpB [Escherichia coli 94.0618]
 gi|427260080|gb|EKW26078.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0183]
 gi|427264041|gb|EKW29740.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.1288]
 gi|427275876|gb|EKW40469.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0428]
 gi|427282427|gb|EKW46677.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0939]
 gi|427291326|gb|EKW54740.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0932]
 gi|427298443|gb|EKW61445.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0107]
 gi|427299919|gb|EKW62880.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0003]
 gi|427311752|gb|EKW73928.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.1742]
 gi|427314740|gb|EKW76771.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0007]
 gi|427319003|gb|EKW80837.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0672]
 gi|427327344|gb|EKW88737.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0678]
 gi|427328670|gb|EKW90028.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0713]
 gi|429253084|gb|EKY37580.1| ATP-dependent chaperone protein ClpB [Escherichia coli 96.0109]
 gi|429254795|gb|EKY39162.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0010]
 gi|429348329|gb|EKY85099.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02092]
 gi|429359075|gb|EKY95741.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02030]
 gi|429361406|gb|EKY98061.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02093]
 gi|429361713|gb|EKY98366.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02033-1]
 gi|429364353|gb|EKZ00973.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02318]
 gi|429375202|gb|EKZ11740.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02913]
 gi|429376359|gb|EKZ12888.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-02281]
 gi|429378668|gb|EKZ15176.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-03439]
 gi|429379532|gb|EKZ16032.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-03943]
 gi|429390667|gb|EKZ27076.1| chaperone ClpB [Escherichia coli O104:H4 str. 11-04080]
 gi|429406135|gb|EKZ42396.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9990]
 gi|429409054|gb|EKZ45285.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9450]
 gi|429413384|gb|EKZ49571.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4987]
 gi|429416528|gb|EKZ52683.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4984]
 gi|429420238|gb|EKZ56368.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4986]
 gi|429428129|gb|EKZ64208.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-5604]
 gi|429431551|gb|EKZ67598.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-4988]
 gi|429436661|gb|EKZ72677.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-5603]
 gi|429437565|gb|EKZ73568.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-6006]
 gi|429447235|gb|EKZ83159.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec12-0465]
 gi|429451488|gb|EKZ87379.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec11-9941]
 gi|429456748|gb|EKZ92592.1| chaperone ClpB [Escherichia coli O104:H4 str. Ec12-0466]
 gi|430874323|gb|ELB97880.1| chaperone ClpB [Escherichia coli KTE2]
 gi|430883700|gb|ELC06674.1| chaperone ClpB [Escherichia coli KTE10]
 gi|430897818|gb|ELC20012.1| chaperone ClpB [Escherichia coli KTE12]
 gi|430905160|gb|ELC26835.1| chaperone ClpB [Escherichia coli KTE16]
 gi|430906999|gb|ELC28503.1| chaperone ClpB [Escherichia coli KTE15]
 gi|430914786|gb|ELC35881.1| chaperone ClpB [Escherichia coli KTE25]
 gi|430924187|gb|ELC44909.1| chaperone ClpB [Escherichia coli KTE21]
 gi|430924628|gb|ELC45313.1| chaperone ClpB [Escherichia coli KTE26]
 gi|430928806|gb|ELC49337.1| chaperone ClpB [Escherichia coli KTE28]
 gi|430934408|gb|ELC54770.1| chaperone ClpB [Escherichia coli KTE39]
 gi|430938174|gb|ELC58417.1| chaperone ClpB [Escherichia coli KTE44]
 gi|430943395|gb|ELC63508.1| chaperone ClpB [Escherichia coli KTE178]
 gi|430954358|gb|ELC73230.1| chaperone ClpB [Escherichia coli KTE181]
 gi|430962645|gb|ELC80502.1| chaperone ClpB [Escherichia coli KTE188]
 gi|430965485|gb|ELC82903.1| chaperone ClpB [Escherichia coli KTE189]
 gi|430973433|gb|ELC90401.1| chaperone ClpB [Escherichia coli KTE191]
 gi|430979217|gb|ELC96003.1| chaperone ClpB [Escherichia coli KTE193]
 gi|430981147|gb|ELC97879.1| chaperone ClpB [Escherichia coli KTE201]
 gi|430988061|gb|ELD04562.1| chaperone ClpB [Escherichia coli KTE204]
 gi|430996977|gb|ELD13245.1| chaperone ClpB [Escherichia coli KTE206]
 gi|431004123|gb|ELD19351.1| chaperone ClpB [Escherichia coli KTE208]
 gi|431015033|gb|ELD28592.1| chaperone ClpB [Escherichia coli KTE212]
 gi|431019262|gb|ELD32664.1| chaperone ClpB [Escherichia coli KTE213]
 gi|431023908|gb|ELD37103.1| chaperone ClpB [Escherichia coli KTE214]
 gi|431027660|gb|ELD40717.1| chaperone ClpB [Escherichia coli KTE216]
 gi|431037409|gb|ELD48392.1| chaperone ClpB [Escherichia coli KTE220]
 gi|431041280|gb|ELD51811.1| chaperone ClpB [Escherichia coli KTE224]
 gi|431050018|gb|ELD59777.1| chaperone ClpB [Escherichia coli KTE228]
 gi|431050645|gb|ELD60384.1| chaperone ClpB [Escherichia coli KTE230]
 gi|431059324|gb|ELD68682.1| chaperone ClpB [Escherichia coli KTE234]
 gi|431062621|gb|ELD71885.1| chaperone ClpB [Escherichia coli KTE233]
 gi|431068692|gb|ELD77166.1| chaperone ClpB [Escherichia coli KTE235]
 gi|431073596|gb|ELD81238.1| chaperone ClpB [Escherichia coli KTE236]
 gi|431078889|gb|ELD85868.1| chaperone ClpB [Escherichia coli KTE237]
 gi|431082715|gb|ELD89027.1| chaperone ClpB [Escherichia coli KTE47]
 gi|431090181|gb|ELD95951.1| chaperone ClpB [Escherichia coli KTE49]
 gi|431092570|gb|ELD98261.1| chaperone ClpB [Escherichia coli KTE51]
 gi|431098769|gb|ELE04075.1| chaperone ClpB [Escherichia coli KTE53]
 gi|431114090|gb|ELE17642.1| chaperone ClpB [Escherichia coli KTE56]
 gi|431126882|gb|ELE29223.1| chaperone ClpB [Escherichia coli KTE60]
 gi|431137420|gb|ELE39267.1| chaperone ClpB [Escherichia coli KTE67]
 gi|431140270|gb|ELE42044.1| chaperone ClpB [Escherichia coli KTE66]
 gi|431147630|gb|ELE48984.1| chaperone ClpB [Escherichia coli KTE72]
 gi|431152924|gb|ELE53844.1| chaperone ClpB [Escherichia coli KTE75]
 gi|431158219|gb|ELE58837.1| chaperone ClpB [Escherichia coli KTE76]
 gi|431162309|gb|ELE62759.1| chaperone ClpB [Escherichia coli KTE77]
 gi|431169228|gb|ELE69449.1| chaperone ClpB [Escherichia coli KTE80]
 gi|431169930|gb|ELE70144.1| chaperone ClpB [Escherichia coli KTE81]
 gi|431179497|gb|ELE79397.1| chaperone ClpB [Escherichia coli KTE86]
 gi|431180932|gb|ELE80808.1| chaperone ClpB [Escherichia coli KTE83]
 gi|431189556|gb|ELE88977.1| chaperone ClpB [Escherichia coli KTE87]
 gi|431189973|gb|ELE89389.1| chaperone ClpB [Escherichia coli KTE93]
 gi|431198760|gb|ELE97543.1| chaperone ClpB [Escherichia coli KTE111]
 gi|431199842|gb|ELE98569.1| chaperone ClpB [Escherichia coli KTE116]
 gi|431209975|gb|ELF08042.1| chaperone ClpB [Escherichia coli KTE119]
 gi|431213521|gb|ELF11395.1| chaperone ClpB [Escherichia coli KTE142]
 gi|431219520|gb|ELF16916.1| chaperone ClpB [Escherichia coli KTE143]
 gi|431220903|gb|ELF18232.1| chaperone ClpB [Escherichia coli KTE156]
 gi|431233024|gb|ELF28622.1| chaperone ClpB [Escherichia coli KTE162]
 gi|431238051|gb|ELF32991.1| chaperone ClpB [Escherichia coli KTE161]
 gi|431242251|gb|ELF36672.1| chaperone ClpB [Escherichia coli KTE171]
 gi|431242452|gb|ELF36869.1| chaperone ClpB [Escherichia coli KTE169]
 gi|431255423|gb|ELF48676.1| chaperone ClpB [Escherichia coli KTE8]
 gi|431256994|gb|ELF49924.1| chaperone ClpB [Escherichia coli KTE6]
 gi|431261505|gb|ELF53539.1| chaperone ClpB [Escherichia coli KTE9]
 gi|431264650|gb|ELF56355.1| chaperone ClpB [Escherichia coli KTE17]
 gi|431272401|gb|ELF63503.1| chaperone ClpB [Escherichia coli KTE18]
 gi|431274084|gb|ELF65148.1| chaperone ClpB [Escherichia coli KTE45]
 gi|431280926|gb|ELF71834.1| chaperone ClpB [Escherichia coli KTE42]
 gi|431282813|gb|ELF73687.1| chaperone ClpB [Escherichia coli KTE23]
 gi|431290737|gb|ELF81268.1| chaperone ClpB [Escherichia coli KTE43]
 gi|431295668|gb|ELF85401.1| chaperone ClpB [Escherichia coli KTE29]
 gi|431306883|gb|ELF95185.1| chaperone ClpB [Escherichia coli KTE46]
 gi|431309349|gb|ELF97549.1| chaperone ClpB [Escherichia coli KTE48]
 gi|431314008|gb|ELG01963.1| chaperone ClpB [Escherichia coli KTE50]
 gi|431317134|gb|ELG04916.1| chaperone ClpB [Escherichia coli KTE54]
 gi|431328930|gb|ELG16234.1| chaperone ClpB [Escherichia coli KTE63]
 gi|431338743|gb|ELG25819.1| chaperone ClpB [Escherichia coli KTE78]
 gi|431350931|gb|ELG37732.1| chaperone ClpB [Escherichia coli KTE79]
 gi|431354165|gb|ELG40904.1| chaperone ClpB [Escherichia coli KTE91]
 gi|431361324|gb|ELG47915.1| chaperone ClpB [Escherichia coli KTE101]
 gi|431363452|gb|ELG50013.1| chaperone ClpB [Escherichia coli KTE115]
 gi|431384371|gb|ELG68427.1| chaperone ClpB [Escherichia coli KTE135]
 gi|431384440|gb|ELG68492.1| chaperone ClpB [Escherichia coli KTE136]
 gi|431387893|gb|ELG71698.1| chaperone ClpB [Escherichia coli KTE140]
 gi|431399103|gb|ELG82515.1| chaperone ClpB [Escherichia coli KTE144]
 gi|431403787|gb|ELG87053.1| chaperone ClpB [Escherichia coli KTE146]
 gi|431409810|gb|ELG92980.1| chaperone ClpB [Escherichia coli KTE147]
 gi|431415458|gb|ELG98000.1| chaperone ClpB [Escherichia coli KTE158]
 gi|431419496|gb|ELH01845.1| chaperone ClpB [Escherichia coli KTE154]
 gi|431431290|gb|ELH13067.1| chaperone ClpB [Escherichia coli KTE194]
 gi|431438678|gb|ELH20051.1| chaperone ClpB [Escherichia coli KTE190]
 gi|431441763|gb|ELH22871.1| chaperone ClpB [Escherichia coli KTE173]
 gi|431443123|gb|ELH24201.1| chaperone ClpB [Escherichia coli KTE175]
 gi|431452017|gb|ELH32468.1| chaperone ClpB [Escherichia coli KTE184]
 gi|431456101|gb|ELH36446.1| chaperone ClpB [Escherichia coli KTE196]
 gi|431462584|gb|ELH42794.1| chaperone ClpB [Escherichia coli KTE183]
 gi|431466555|gb|ELH46574.1| chaperone ClpB [Escherichia coli KTE197]
 gi|431470083|gb|ELH50007.1| chaperone ClpB [Escherichia coli KTE203]
 gi|431472383|gb|ELH52272.1| chaperone ClpB [Escherichia coli KTE202]
 gi|431480655|gb|ELH60373.1| chaperone ClpB [Escherichia coli KTE207]
 gi|431487782|gb|ELH67425.1| chaperone ClpB [Escherichia coli KTE209]
 gi|431490475|gb|ELH70087.1| chaperone ClpB [Escherichia coli KTE211]
 gi|431495771|gb|ELH75357.1| chaperone ClpB [Escherichia coli KTE217]
 gi|431498854|gb|ELH78038.1| chaperone ClpB [Escherichia coli KTE215]
 gi|431504081|gb|ELH82811.1| chaperone ClpB [Escherichia coli KTE218]
 gi|431507559|gb|ELH85843.1| chaperone ClpB [Escherichia coli KTE223]
 gi|431529587|gb|ELI06285.1| chaperone ClpB [Escherichia coli KTE104]
 gi|431529629|gb|ELI06325.1| chaperone ClpB [Escherichia coli KTE105]
 gi|431534093|gb|ELI10582.1| chaperone ClpB [Escherichia coli KTE106]
 gi|431549278|gb|ELI23361.1| chaperone ClpB [Escherichia coli KTE112]
 gi|431550430|gb|ELI24422.1| chaperone ClpB [Escherichia coli KTE113]
 gi|431555156|gb|ELI29012.1| chaperone ClpB [Escherichia coli KTE117]
 gi|431563643|gb|ELI36847.1| chaperone ClpB [Escherichia coli KTE120]
 gi|431568097|gb|ELI41086.1| chaperone ClpB [Escherichia coli KTE124]
 gi|431569328|gb|ELI42282.1| chaperone ClpB [Escherichia coli KTE122]
 gi|431580227|gb|ELI52791.1| chaperone ClpB [Escherichia coli KTE125]
 gi|431582551|gb|ELI54569.1| chaperone ClpB [Escherichia coli KTE128]
 gi|431595513|gb|ELI65507.1| chaperone ClpB [Escherichia coli KTE131]
 gi|431600784|gb|ELI70450.1| chaperone ClpB [Escherichia coli KTE133]
 gi|431603838|gb|ELI73259.1| chaperone ClpB [Escherichia coli KTE137]
 gi|431609405|gb|ELI78727.1| chaperone ClpB [Escherichia coli KTE138]
 gi|431614621|gb|ELI83761.1| chaperone ClpB [Escherichia coli KTE139]
 gi|431617973|gb|ELI86956.1| chaperone ClpB [Escherichia coli KTE145]
 gi|431625959|gb|ELI94512.1| chaperone ClpB [Escherichia coli KTE148]
 gi|431627373|gb|ELI95780.1| chaperone ClpB [Escherichia coli KTE150]
 gi|431632983|gb|ELJ01266.1| chaperone ClpB [Escherichia coli KTE153]
 gi|431643348|gb|ELJ11045.1| chaperone ClpB [Escherichia coli KTE160]
 gi|431645363|gb|ELJ12919.1| chaperone ClpB [Escherichia coli KTE163]
 gi|431655297|gb|ELJ22331.1| chaperone ClpB [Escherichia coli KTE166]
 gi|431658892|gb|ELJ25800.1| chaperone ClpB [Escherichia coli KTE167]
 gi|431660628|gb|ELJ27496.1| chaperone ClpB [Escherichia coli KTE168]
 gi|431669569|gb|ELJ35988.1| chaperone ClpB [Escherichia coli KTE174]
 gi|431676528|gb|ELJ42645.1| chaperone ClpB [Escherichia coli KTE177]
 gi|431690895|gb|ELJ56363.1| chaperone ClpB [Escherichia coli KTE232]
 gi|431699970|gb|ELJ64958.1| chaperone ClpB [Escherichia coli KTE82]
 gi|431704983|gb|ELJ69606.1| chaperone ClpB [Escherichia coli KTE88]
 gi|431714776|gb|ELJ78953.1| chaperone ClpB [Escherichia coli KTE90]
 gi|431719711|gb|ELJ83762.1| chaperone ClpB [Escherichia coli KTE95]
 gi|431719928|gb|ELJ83964.1| chaperone ClpB [Escherichia coli KTE94]
 gi|431733804|gb|ELJ97209.1| chaperone ClpB [Escherichia coli KTE99]
 gi|432345136|gb|ELL39657.1| protein disaggregation chaperone [Escherichia coli J96]
 gi|432348189|gb|ELL42640.1| protein disaggregation chaperone [Escherichia coli J96]
 gi|441609076|emb|CCP95295.1| ClpB protein [Escherichia coli O10:K5(L):H4 str. ATCC 23506]
 gi|441651585|emb|CCQ02785.1| ClpB protein [Escherichia coli O5:K4(L):H4 str. ATCC 23502]
 gi|441714329|emb|CCQ05567.1| ClpB protein [Escherichia coli Nissle 1917]
 gi|443423155|gb|AGC88059.1| protein disaggregation chaperone [Escherichia coli APEC O78]
 gi|444537635|gb|ELV17552.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0814]
 gi|444539174|gb|ELV18955.1| ATP-dependent chaperone protein ClpB [Escherichia coli 09BKT078844]
 gi|444547063|gb|ELV25699.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0815]
 gi|444556894|gb|ELV34271.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0839]
 gi|444557506|gb|ELV34839.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0816]
 gi|444562805|gb|ELV39846.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0848]
 gi|444572407|gb|ELV48836.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1753]
 gi|444576359|gb|ELV52545.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1775]
 gi|444578805|gb|ELV54837.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1793]
 gi|444592734|gb|ELV67980.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA11]
 gi|444592782|gb|ELV68023.1| ATP-dependent chaperone protein ClpB [Escherichia coli ATCC 700728]
 gi|444594598|gb|ELV69763.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1805]
 gi|444605840|gb|ELV80470.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA13]
 gi|444606504|gb|ELV81116.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA19]
 gi|444615131|gb|ELV89343.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA2]
 gi|444622501|gb|ELV96453.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA47]
 gi|444623394|gb|ELV97316.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA48]
 gi|444629157|gb|ELW02870.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA8]
 gi|444637976|gb|ELW11332.1| ATP-dependent chaperone protein ClpB [Escherichia coli 7.1982]
 gi|444640430|gb|ELW13694.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1781]
 gi|444644716|gb|ELW17818.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.1762]
 gi|444653791|gb|ELW26495.1| ATP-dependent chaperone protein ClpB [Escherichia coli PA35]
 gi|444659179|gb|ELW31606.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3.4880]
 gi|444663627|gb|ELW35842.1| ATP-dependent chaperone protein ClpB [Escherichia coli 95.0083]
 gi|444669329|gb|ELW41316.1| ATP-dependent chaperone protein ClpB [Escherichia coli 99.0670]
 gi|449316769|gb|EMD06874.1| protein disaggregation chaperone [Escherichia coli O08]
 gi|449318506|gb|EMD08572.1| protein disaggregation chaperone [Escherichia coli S17]
          Length = 857

 Score =  784 bits (2025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSENGYDPVYGAR 815


>gi|354724735|ref|ZP_09038950.1| protein disaggregation chaperone [Enterobacter mori LMG 25706]
          Length = 857

 Score =  784 bits (2025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/654 (57%), Positives = 512/654 (78%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+ H V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELRHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+      Q +I   +      LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEK------QLEIATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQDLHNRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 734 YGHMKDLVLGVVSHSFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            IS  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+LI
Sbjct: 794 HISDEALKLLSENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839


>gi|417708677|ref|ZP_12357705.1| ATP-dependent chaperone ClpB [Shigella flexneri VA-6]
 gi|420332545|ref|ZP_14834195.1| ATP-dependent chaperone ClpB [Shigella flexneri K-1770]
 gi|332999364|gb|EGK18949.1| ATP-dependent chaperone ClpB [Shigella flexneri VA-6]
 gi|391249376|gb|EIQ08611.1| ATP-dependent chaperone ClpB [Shigella flexneri K-1770]
          Length = 857

 Score =  784 bits (2025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSENGYDPVYGAR 815


>gi|255319673|ref|ZP_05360882.1| ATP-dependent chaperone protein ClpB [Acinetobacter radioresistens
           SK82]
 gi|262378533|ref|ZP_06071690.1| ATP-dependent chaperone ClpB [Acinetobacter radioresistens SH164]
 gi|255303290|gb|EET82498.1| ATP-dependent chaperone protein ClpB [Acinetobacter radioresistens
           SK82]
 gi|262299818|gb|EEY87730.1| ATP-dependent chaperone ClpB [Acinetobacter radioresistens SH164]
          Length = 859

 Score =  784 bits (2025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/622 (58%), Positives = 503/622 (80%), Gaps = 6/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL  K++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKDKQVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  +I+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLNDLAKQEGRVILFIDELHTLVGAGKTDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVKILDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+E+DSKPE +DKL+RRLIQLK++ EA+K++ D  SK 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMELDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKS 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++K+I +++ +Y +LE++WK EKTL++ +++ + E+++ R+ + KA R+ DW   S
Sbjct: 437 EVNYLEKQIEEVQKEYNDLEEVWKAEKTLVEGTKKAQVELDQARVALEKAQREGDWAEAS 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ L++      ++  +  +  LL+ KV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 RLQYGVIPELQKQLEQD-----EVIEDHEEPKLLRNKVTDNEIAEVVSAATGIPVAKMLQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E  L  RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GEREKLLHMEEFLHNRVVGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           IL DE+EKA+ DVFNILLQ+LDDGRLTD++GR I+F+NT+IVMTSNLGS  ++E+ +G  
Sbjct: 672 ILFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVIDFKNTVIVMTSNLGSQDVRELGEGAS 731

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E ++  VM+ V  +FRPEFINRID++++F  L +  I  IA+IQL  L+++L + +M L
Sbjct: 732 DEEMRSVVMSAVSHHFRPEFINRIDELVIFHSLKKSQIRGIADIQLERLRSRLAERDMSL 791

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            I   A   + + GFD +YGAR
Sbjct: 792 TIDDTAFDLLIDAGFDPVYGAR 813


>gi|170765528|ref|ZP_02900339.1| ATP-dependent chaperone protein ClpB [Escherichia albertii TW07627]
 gi|170124674|gb|EDS93605.1| ATP-dependent chaperone protein ClpB [Escherichia albertii TW07627]
          Length = 857

 Score =  784 bits (2025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDEAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSENGYDPVYGAR 815


>gi|262369634|ref|ZP_06062962.1| ATP-dependent protease Hsp 100 [Acinetobacter johnsonii SH046]
 gi|262315702|gb|EEY96741.1| ATP-dependent protease Hsp 100 [Acinetobacter johnsonii SH046]
          Length = 859

 Score =  784 bits (2025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/624 (58%), Positives = 505/624 (80%), Gaps = 10/624 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIIN EVP SL  K++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIINREVPESLQGKRVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK++S    ++I+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLKDLSKQDGEVILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGV+I D AI+AA+++S+R
Sbjct: 317 RQFIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVKILDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+E+DSKPE +DKLERRLIQLK++ EA+K++ D  S+ 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMELDSKPEALDKLERRLIQLKLQLEAVKKDEDAGSRA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++K+I++++ +Y +LE++WK EKTL++ ++Q++ E+++ R+ + KA R++D   +S
Sbjct: 437 EVAHLEKQISEVQREYNDLEEVWKAEKTLVEGTKQVQAELDQARIALQKAQRENDLGEMS 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L E+            +  LL+ KV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 RLQYGVIPELEKRLNEEEVV-----EEKEEPKLLRNKVTDNEIAEVVSAATGIPVAKMMQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E  L  RVVGQD+A+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GEREKLLHMEEFLHNRVVGQDDAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS  ++E+  GD 
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSSDVREL--GDN 729

Query: 554 ---EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNM 610
              E ++  VMN V  +FRPEFINRID+++VF  L +  I  IA+IQL+ L+++L++ +M
Sbjct: 730 PLDEEVRAVVMNAVTQHFRPEFINRIDELVVFHSLKKAQIRGIADIQLDRLRDRLVEKDM 789

Query: 611 DLKISKAALKKISNIGFDLIYGAR 634
            L +   A   + + GFD +YGAR
Sbjct: 790 RLTVDDQAFDLLIDAGFDPVYGAR 813


>gi|381196637|ref|ZP_09903979.1| ATP-dependent chaperone ClpB [Acinetobacter lwoffii WJ10621]
          Length = 859

 Score =  784 bits (2025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/624 (58%), Positives = 505/624 (80%), Gaps = 10/624 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIIN EVP SL  K++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIINREVPESLQGKRVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK++S    ++I+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLKDLSKQDGEVILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGV+I D AI+AA+++S+R
Sbjct: 317 RQFIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVKILDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+E+DSKPE +DKLERRLIQLK++ EA+K++ D  S+ 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMELDSKPEALDKLERRLIQLKLQLEAVKKDEDAGSRA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++K+I++++ +Y +LE++WK EKTL++ ++Q++ E+++ R+ + KA R++D   +S
Sbjct: 437 EVAHLEKQISEVQHEYNDLEEVWKAEKTLVEGTKQVQAELDQARIALQKAQRENDLGEMS 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L E+            +  LL+ KV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 RLQYGVIPELEKRLNEEEVV-----EEKEEPKLLRNKVTDNEIAEVVSAATGIPVAKMMQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E  L  RVVGQD+A+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GEREKLLHMEEFLHNRVVGQDDAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS  ++E+  GD 
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSSDVREL--GDN 729

Query: 554 ---EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNM 610
              E ++  VMN V  +FRPEFINRID+++VF  L +  I  IA+IQL+ L+++L++ +M
Sbjct: 730 PLDEEVRAVVMNAVAQHFRPEFINRIDELVVFHSLKKAQIRGIADIQLDRLRDRLVEKDM 789

Query: 611 DLKISKAALKKISNIGFDLIYGAR 634
            L +   A   + + GFD +YGAR
Sbjct: 790 RLTVDDQAFDLLIDAGFDPVYGAR 813


>gi|359430144|ref|ZP_09221157.1| chaperone protein ClpB [Acinetobacter sp. NBRC 100985]
 gi|358234361|dbj|GAB02696.1| chaperone protein ClpB [Acinetobacter sp. NBRC 100985]
          Length = 859

 Score =  784 bits (2025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/623 (59%), Positives = 503/623 (80%), Gaps = 8/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP SL +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPESLKNKRVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY  HHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D  SK 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDSGSKA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++++I + + +Y +LE+IWK EKTL++  ++ + E+++ R  + KA R+ D    +
Sbjct: 437 EVNHLEQQIAEKQKEYNDLEEIWKAEKTLVEGDKKAQVELDQARSALEKAKREGDLAEAA 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ L+   Q ++   N   K  L++TKV   EIAE+VS  TGIPVSK++Q
Sbjct: 497 RLQYGVIPELQKRLE---QAEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVSKMLQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLLN+E  L  RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GEREKLLNMEEFLHNRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-- 551
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS  ++E+ +G  
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGAT 731

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E ++  VMN V  +FRPEFINRID+++VF  L +  I  IA+IQL+ L+++L   +M 
Sbjct: 732 DDE-VRAVVMNAVGQHFRPEFINRIDELVVFHSLQKAQIRGIADIQLDRLRSRLSDRDMG 790

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +   A   + + GFD +YGAR
Sbjct: 791 LTVDDTAFDLLIDAGFDPVYGAR 813


>gi|271501677|ref|YP_003334703.1| ATP-dependent chaperone ClpB [Dickeya dadantii Ech586]
 gi|270345232|gb|ACZ77997.1| ATP-dependent chaperone ClpB [Dickeya dadantii Ech586]
          Length = 857

 Score =  784 bits (2025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/662 (56%), Positives = 517/662 (78%), Gaps = 15/662 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQFIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S K
Sbjct: 380 YISDRKLPDKAIDLIDEAASSIRMQIDSKPEPLDRLDRRIIQLKLEQQALKKESDEASLK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E +Y+ LE+ WK EK  +  +Q IK  +E+ ++ + +A R+ D   +S
Sbjct: 440 RLEILNSELEQKEREYSKLEEEWKAEKASLTGTQNIKAALEQAKISLEQARRQGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ +V   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATQAE------GKTMHLLRNRVTDAEIAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQ+EA+ AV+N+IRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLASFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + +
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEMN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              ++  V+  V  +FRPEFINRID+++VF  L + +I SIA IQL  L  ++ +    +
Sbjct: 734 YAQMRDMVLGVVSHHFRPEFINRIDEVVVFHPLGQAHITSIAQIQLQRLYKRMEERGYTV 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
            IS AAL+ +   GFD +YGAR +   K+++  ++     ++P A  I  G L+     +
Sbjct: 794 SISDAALELLGKSGFDPVYGARPL---KRAIQQMI-----ENPLAQQILSGALVPGKAVT 845

Query: 673 LD 674
           LD
Sbjct: 846 LD 847


>gi|197335143|ref|YP_002155324.1| ATP-dependent chaperone ClpB [Vibrio fischeri MJ11]
 gi|423685282|ref|ZP_17660090.1| ATP-dependent chaperone ClpB [Vibrio fischeri SR5]
 gi|197316633|gb|ACH66080.1| ATP-dependent chaperone ClpB [Vibrio fischeri MJ11]
 gi|371495783|gb|EHN71378.1| ATP-dependent chaperone ClpB [Vibrio fischeri SR5]
          Length = 861

 Score =  784 bits (2025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/625 (59%), Positives = 502/625 (80%), Gaps = 13/625 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IG+PGVGKTAIVEGLAQRIINGEVP  L +K++L LDI  L+AG K+RGEFE+RL
Sbjct: 200 NNPVIIGQPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDIGALVAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKEEGSVILFIDEVHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVLVDEPTVEDTVAILRGLKERYEIHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +DKL+R++IQLKIE +A+ +E D++S K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMEIDSKPESLDKLDRKIIQLKIEQQALVKESDDASLK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +  E+ + E +YA LE++WK EK  +  +Q IK E+E  R  +  A R  D   +S
Sbjct: 440 RLDSLNLELMQKEREYAELEEVWKAEKAALSGTQHIKTELETARSNMEIARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + +LLK KV   EIAE++SR TGIPV+K+++
Sbjct: 500 ELQYGRIPELEKQLDLAAQAEMQ------EMSLLKNKVTDAEIAEVLSRQTGIPVNKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E +L  RV+GQ EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLKMEEVLHHRVIGQAEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKSLANFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK----EME 549
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGS+KI+    E+ 
Sbjct: 674 LLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSEKIQQHFGELN 733

Query: 550 KGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
            G    IK  VM+ V  +FRPEF+NR+D+ +VF  L +++I +IA+IQL  L+ +L + +
Sbjct: 734 YGG---IKEIVMDVVSQHFRPEFLNRVDETVVFHPLAQEHIKNIASIQLQRLEKRLNEKD 790

Query: 610 MDLKISKAALKKISNIGFDLIYGAR 634
             L+++  AL  I+  GFD +YGAR
Sbjct: 791 YQLQVTDEALNLIAEAGFDPVYGAR 815


>gi|251788635|ref|YP_003003356.1| protein disaggregation chaperone [Dickeya zeae Ech1591]
 gi|247537256|gb|ACT05877.1| ATP-dependent chaperone ClpB [Dickeya zeae Ech1591]
          Length = 857

 Score =  784 bits (2025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/662 (56%), Positives = 518/662 (78%), Gaps = 15/662 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQFIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S K
Sbjct: 380 YISDRKLPDKAIDLIDEAASSIRMQIDSKPEPLDRLDRRIIQLKLEQQALKKESDEASLK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E +Y+ LE+ WK EK  +  +Q IK  +E+ ++ + +A R+ D   +S
Sbjct: 440 RLEILNAELEQKEREYSKLEEEWKAEKASLTGTQNIKAALEQAKISLEQARRQGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ +V   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATQAE------GKTMHLLRNRVTDAEIAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQ+EA+ AV+N+IRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLASFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + +
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEMN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              ++  V+  V  +FRPEFINRID+++VF  L + +I SIA IQL  L  ++ +    +
Sbjct: 734 YSQMRDMVLGIVSHHFRPEFINRIDEVVVFHPLGQSHITSIAQIQLQRLYKRMEERGYTV 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
            IS AAL+ +   GFD +YGAR +   K+++  ++     ++P A  I  G L+     +
Sbjct: 794 SISDAALELLGKSGFDPVYGARPL---KRAIQQMI-----ENPLAQKILSGALVPGKSVT 845

Query: 673 LD 674
           LD
Sbjct: 846 LD 847


>gi|17864015|gb|AAL47016.1|AF449501_1 ClpB ATP protease [Paracoccidioides brasiliensis]
          Length = 792

 Score =  784 bits (2025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/624 (58%), Positives = 505/624 (80%), Gaps = 10/624 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL  K++L LD+  LLAG KYRGEFE+RL
Sbjct: 130 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKGKRVLSLDLGSLLAGAKYRGEFEERL 189

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 190 KAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEY 249

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGV+I D AI+AA+++S+R
Sbjct: 250 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVKILDSAIIAAAKMSHR 309

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+E+DSKPE +DKLERRLIQLK++ EA+K++ D  S+ 
Sbjct: 310 YITDRQLPDKAIDLIDEAASRIKMELDSKPEALDKLERRLIQLKLQLEAVKKDEDAGSRA 369

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++K+I  ++  Y +LE++WK EKTL++ ++QI+ ++++ R+ + KA R++D   +S
Sbjct: 370 EVSHLEKQIEDVQKDYNDLEEVWKSEKTLVEGTKQIQAQLDQARIALQKAQRENDLGEMS 429

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L +      +L     +  LL+ KV   EIAE+VS  TGIPV+K++Q
Sbjct: 430 RLQYGVIPELEKQLAQD-----ELVEEKEEPKLLRNKVTDNEIAEVVSAATGIPVAKMLQ 484

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L +RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 485 GEREKLLQMESFLHQRVVGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 544

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 545 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 604

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGD- 552
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS  ++E+  GD 
Sbjct: 605 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSSDVREL--GDN 662

Query: 553 --KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNM 610
             ++ ++  VM  V  +FRPEFINRID+++VF  L +  I  IA+IQL+ L+ +L   ++
Sbjct: 663 PSRDDVRNVVMAAVSEHFRPEFINRIDELVVFHALEKAQIRGIADIQLDRLRARLADRDI 722

Query: 611 DLKISKAALKKISNIGFDLIYGAR 634
            L +  +A  ++   GFD +YGAR
Sbjct: 723 KLTVDDSAFDQLIEAGFDPVYGAR 746


>gi|406675303|ref|ZP_11082492.1| chaperone ClpB [Aeromonas veronii AMC35]
 gi|404627635|gb|EKB24435.1| chaperone ClpB [Aeromonas veronii AMC35]
          Length = 857

 Score =  784 bits (2025), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/622 (58%), Positives = 503/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIG PGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGAPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 260 KAVLTDLAKEEGNVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+K
Sbjct: 380 YIADRQLPDKAIDLIDEAAASIRLQIDSKPEALDRLERRIIQLKLEQQALMKEDDDASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI + + +Y  L+++WK EK  +  +Q IK  +E+ R  ++ A R  D   +S
Sbjct: 440 RLELINQEIGEKDREYNELDEVWKAEKAALAGTQHIKAALEQARQDLDVARRAGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + +LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEDQLHSRVIGQEEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ +++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALAEFLFDTQDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQEHHSEKD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  +M+ +   FRPEFINRID+ +VF  L   +I SIA IQL  L  +L     ++
Sbjct: 734 YDEMKTMLMDVLTRSFRPEFINRIDETVVFHPLGEDHIKSIARIQLKSLMGRLEAQGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S+A L+K+ + GFD +YGAR
Sbjct: 794 EVSEALLEKLVHAGFDPVYGAR 815


>gi|30063993|ref|NP_838164.1| protein disaggregation chaperone [Shigella flexneri 2a str. 2457T]
 gi|110806537|ref|YP_690057.1| protein disaggregation chaperone [Shigella flexneri 5 str. 8401]
 gi|384544218|ref|YP_005728281.1| Chaperone protein clpB [Shigella flexneri 2002017]
 gi|415857540|ref|ZP_11532240.1| ATP-dependent chaperone ClpB [Shigella flexneri 2a str. 2457T]
 gi|417704449|ref|ZP_12353544.1| ATP-dependent chaperone ClpB [Shigella flexneri K-218]
 gi|417724281|ref|ZP_12373083.1| ATP-dependent chaperone ClpB [Shigella flexneri K-304]
 gi|417734715|ref|ZP_12383363.1| ATP-dependent chaperone ClpB [Shigella flexneri 2747-71]
 gi|417739488|ref|ZP_12388064.1| ATP-dependent chaperone ClpB [Shigella flexneri 4343-70]
 gi|424838928|ref|ZP_18263565.1| protein disaggregation chaperone [Shigella flexneri 5a str. M90T]
 gi|30042249|gb|AAP17974.1| heat shock protein [Shigella flexneri 2a str. 2457T]
 gi|110616085|gb|ABF04752.1| heat shock protein [Shigella flexneri 5 str. 8401]
 gi|281602004|gb|ADA74988.1| Chaperone protein clpB [Shigella flexneri 2002017]
 gi|313648272|gb|EFS12716.1| ATP-dependent chaperone ClpB [Shigella flexneri 2a str. 2457T]
 gi|332753866|gb|EGJ84243.1| ATP-dependent chaperone ClpB [Shigella flexneri 4343-70]
 gi|332755659|gb|EGJ86022.1| ATP-dependent chaperone ClpB [Shigella flexneri 2747-71]
 gi|332997821|gb|EGK17431.1| ATP-dependent chaperone ClpB [Shigella flexneri K-218]
 gi|333015833|gb|EGK35169.1| ATP-dependent chaperone ClpB [Shigella flexneri K-304]
 gi|383467980|gb|EID63001.1| protein disaggregation chaperone [Shigella flexneri 5a str. M90T]
          Length = 857

 Score =  784 bits (2024), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSENGYDPVYGAR 815


>gi|336451274|ref|ZP_08621714.1| ATP-dependent chaperone ClpB [Idiomarina sp. A28L]
 gi|336281891|gb|EGN75154.1| ATP-dependent chaperone ClpB [Idiomarina sp. A28L]
          Length = 857

 Score =  784 bits (2024), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/623 (59%), Positives = 498/623 (79%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  LLAG KYRG+FE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKRKRVLSLDLGSLLAGAKYRGDFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+   +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELHQEEGQVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP +E+TI+ILRGL++KYE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSVEDTIAILRGLKEKYELHHSVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLKIE +A+ +E D++SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQMDSKPEELDRLERRIIQLKIEQQALAKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +  E+++LE  YA LE +W  EK  ++  Q IKE +++ R  +  A R  D   ++
Sbjct: 440 RLETLSNELSELEGAYAELETVWNSEKMAVQGHQHIKELLDQARNDLEIANRARDLNRMA 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE  L+     ++Q      + TLL+ +V  EEIAE++SR TGIPVS++++
Sbjct: 500 ELQYGKIPELEHQLEAALSAEMQ------EMTLLRNRVTDEEIAEVLSRWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L +RVVGQ EA+ AV+N+IRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEDNLHQRVVGQHEAVVAVANSIRRSRAGLSDPDRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALARFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGS  I+E   G+ 
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSHLIQE-HAGEV 732

Query: 554 EIIKLAVM--NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           +  ++  M  + ++  F+PEF+NRID+ +VF  L   ++  IA IQL  L N+L   +  
Sbjct: 733 QYEEMKAMLGDVLRTAFKPEFLNRIDETVVFHPLADSDLNRIAKIQLQRLFNRLEGRDYK 792

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +S+AA+ +++ +GFD ++GAR
Sbjct: 793 LDVSEAAITQLAKVGFDPLFGAR 815


>gi|183597507|ref|ZP_02959000.1| hypothetical protein PROSTU_00781 [Providencia stuartii ATCC 25827]
 gi|188023153|gb|EDU61193.1| ATP-dependent chaperone protein ClpB [Providencia stuartii ATCC
           25827]
          Length = 857

 Score =  784 bits (2024), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/663 (57%), Positives = 518/663 (78%), Gaps = 17/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKK
Sbjct: 380 YITDRMLPDKAIDLIDEAGASLRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++++E+ + E +Y++LE+ WK EK  +  +Q IK E+E  R ++ KA R  D   +S
Sbjct: 440 RLDMLEEELAEKEREYSSLEEEWKAEKASLTGTQHIKAELENARYEMEKARRSGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L+  ++ +           LL+ KV   EIAEI++R TGIPVS++++
Sbjct: 500 ELQYGRIPELEKQLEAATKAE------GKNMKLLRNKVTDVEIAEILARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQQLHQRVIGQDEAVVAVSNAIRRSRAGLSDPNRPIGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E     G
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQERFGTIG 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E +K  VM  V   FRPEFINRID+++VF  L +++I +IANIQL  L  +L +   +
Sbjct: 734 YSE-MKDMVMEVVSHSFRPEFINRIDEVVVFHPLGKEHITNIANIQLGRLYKRLEEHGYE 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           +  + AAL+KI   GFD I+GAR +   K+++   +     ++P A  I  G LI   P 
Sbjct: 793 VSATPAALEKIGEAGFDPIFGARPL---KRAIQQEI-----ENPLAQEILSGKLIPGKPV 844

Query: 672 SLD 674
            LD
Sbjct: 845 VLD 847


>gi|237809508|ref|YP_002893948.1| ATP-dependent chaperone ClpB [Tolumonas auensis DSM 9187]
 gi|237501769|gb|ACQ94362.1| ATP-dependent chaperone ClpB [Tolumonas auensis DSM 9187]
          Length = 858

 Score =  784 bits (2024), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/625 (59%), Positives = 498/625 (79%), Gaps = 13/625 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLSLDMGSLLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKQEGNVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQY+EKDAA ERRFQK+LV++P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYVEKDAALERRFQKVLVDQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAAA I+++IDSKPE +D+LERR++QLK+E +A+ +E D +S +
Sbjct: 380 YISDRQLPDKAIDLIDEAAASIRLQIDSKPEQLDRLERRIVQLKMEQQALMKESDVASAQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I KEI + + +Y  LE+IWK EK  +  +Q IK E+E+ R +++ A R  D   +S
Sbjct: 440 RLGIINKEITEKDREYNELEEIWKAEKAALAGTQHIKSELEQARQELDVARRAGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L YG + +LE+ L   SQ ++Q      + TLL+ +V  EEIAE++SR TGIPV+++++
Sbjct: 500 ELHYGRIPELEKQLDLASQAEMQ------EQTLLRNRVTDEEIAEVLSRWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQDEA++AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEEKLHQRVIGQDEAVNAVANAIRRSRAGLSDPMRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ +++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTQDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE----ME 549
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN +I+MTSNLGSD I+E    ME
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNAVIIMTSNLGSDLIQEHHHLME 733

Query: 550 KGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
             +   +K  +M  +   FRPEF+NRID+ +VF  L  ++I SIA IQL  L  +L  + 
Sbjct: 734 YQE---MKSMLMEVLTRSFRPEFLNRIDETVVFHPLGAEHIQSIAKIQLQSLVKRLEDIG 790

Query: 610 MDLKISKAALKKISNIGFDLIYGAR 634
             +++  + L  ++  GFD +YGAR
Sbjct: 791 YKVELRDSLLSYLAQSGFDPVYGAR 815


>gi|423121670|ref|ZP_17109354.1| chaperone ClpB [Klebsiella oxytoca 10-5246]
 gi|376393762|gb|EHT06417.1| chaperone ClpB [Klebsiella oxytoca 10-5246]
          Length = 857

 Score =  784 bits (2024), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/654 (57%), Positives = 512/654 (78%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKEADEASLK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+   E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  ++  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 734 YSHMKDLILGVVSQNFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            +S  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+LI
Sbjct: 794 HMSDEALKLLSANGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839


>gi|372269569|ref|ZP_09505617.1| clpB protein [Marinobacterium stanieri S30]
          Length = 858

 Score =  784 bits (2024), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/622 (60%), Positives = 508/622 (81%), Gaps = 5/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  KK+L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKRKKVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKQEGQVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQY+EKDAA ERRFQK++V+EP  E+TI+ILRGL+++YE+HHGV+ITD AI+AA++LS R
Sbjct: 320 RQYVEKDAALERRFQKVIVDEPSEEDTIAILRGLKERYEIHHGVDITDSAIIAAAKLSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEA ++I++E+DSKPE MD+L+RRLIQLK+E EA+K+E DE+++K
Sbjct: 380 YITDRQLPDKAIDLVDEAGSRIRMEMDSKPEEMDRLDRRLIQLKMEREALKKEKDEATRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++ I+ LE +YA+ E++WK EK  ++ SQQIKE++++ R+++ +A R  D   +S
Sbjct: 440 RLAELEQTISTLEKEYADFEEVWKAEKASVQGSQQIKEQLDQARVEMEQARRAGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ ++       Q+     +  LL+ KV  EE+AE+VSR TGIPV+K+++
Sbjct: 500 ELQYGKIPELEKQVQAADSSAQQV----EEHQLLRNKVTEEEVAEVVSRWTGIPVNKMLE 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L KRVVGQ EA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 556 GEREKLLRMEEALHKRVVGQSEAVVAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 616 LCKTLASFLFDTEEALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGD 552
           +LLDE+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNTI+VMTSNLGSD I+   +  D
Sbjct: 676 LLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTIVVMTSNLGSDLIQNYSDDDD 735

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
             ++K AVM  V  +FRPE INRID+++VF  L ++ +  IA IQL  L+ +L +  + +
Sbjct: 736 YNLMKSAVMEAVGTHFRPEVINRIDEVVVFHSLRKEQVAGIAEIQLERLRRRLAERELTI 795

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           K++  A+ K+  +GF+ IYGAR
Sbjct: 796 KLTSTAMDKLVEVGFEPIYGAR 817


>gi|440229579|ref|YP_007343372.1| ATP-dependent chaperone ClpB [Serratia marcescens FGI94]
 gi|440051284|gb|AGB81187.1| ATP-dependent chaperone ClpB [Serratia marcescens FGI94]
          Length = 857

 Score =  783 bits (2023), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/662 (56%), Positives = 520/662 (78%), Gaps = 15/662 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ + +A R  D   +S
Sbjct: 440 RLEMLSTELEQKEREYSELEEEWKAEKASLSGTQTIKAELEQAKISLEQARRVGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L   +Q      +      LL+ +V   EIAE++++ TGIPV+++++
Sbjct: 500 ELQYGKIPDLEKQLAAATQ------SEGKTMKLLRNRVTDAEIAEVLAKATGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQDEA+SAVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRLEQELHSRVIGQDEAVSAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALASFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + +
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K +VM  V  +FRPEFINRID+++VF  L +K+I +IA IQL+ L  +L +   ++
Sbjct: 734 YAQMKESVMEMVGHHFRPEFINRIDEVVVFHPLGQKHIAAIAKIQLDRLYQRLEERGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
            I++ AL+ +   G+D +YGAR +   K+++   +     ++P A  I  G+L+   P +
Sbjct: 794 TITEPALELLGKTGYDPVYGARPL---KRAIQQEI-----ENPLAQQILSGELVPGKPVT 845

Query: 673 LD 674
           LD
Sbjct: 846 LD 847


>gi|218547885|ref|YP_002381676.1| protein disaggregation chaperone [Escherichia fergusonii ATCC
           35469]
 gi|422807810|ref|ZP_16856238.1| ATP-dependent chaperone ClpB [Escherichia fergusonii B253]
 gi|218355426|emb|CAQ88034.1| protein disaggregation chaperone [Escherichia fergusonii ATCC
           35469]
 gi|324111233|gb|EGC05215.1| ATP-dependent chaperone ClpB [Escherichia fergusonii B253]
          Length = 857

 Score =  783 bits (2023), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSENGYDPVYGAR 815


>gi|422780508|ref|ZP_16833293.1| ATP-dependent chaperone ClpB [Escherichia coli TW10509]
 gi|323978455|gb|EGB73539.1| ATP-dependent chaperone ClpB [Escherichia coli TW10509]
          Length = 857

 Score =  783 bits (2023), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHITSIAQIQLKRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSENGYDPVYGAR 815


>gi|415840105|ref|ZP_11521621.1| ATP-dependent chaperone ClpB [Escherichia coli RN587/1]
 gi|323188385|gb|EFZ73676.1| ATP-dependent chaperone ClpB [Escherichia coli RN587/1]
          Length = 823

 Score =  783 bits (2023), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 497/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  +  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 166 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGVKGRRVLALDMGALVAGAKYRGEFEERL 225

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 226 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 285

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 286 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 345

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L RR+IQLK+E +A+ +E DE+SKK
Sbjct: 346 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLARRIIQLKLEQQALMKESDEASKK 405

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 406 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 465

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 466 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 519

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 520 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 579

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 580 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 639

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 640 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 699

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 700 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 759

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 760 HISDEALKLLSENGYDPVYGAR 781


>gi|262043836|ref|ZP_06016926.1| chaperone ClpB [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|259038806|gb|EEW39987.1| chaperone ClpB [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
          Length = 861

 Score =  783 bits (2023), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 497/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 264 KGVLTDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 324 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S K
Sbjct: 384 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLK 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+   E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 444 RLDMLNEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 504 ELQYGKIPELEKQLAAATQAE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 558 SERDKLLRMEQELHHRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 618 LCKTLANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FR EFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 738 YGHMKDLVLGVVSQNFRLEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEV 797

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +IS  ALK +S  G+D +YGAR
Sbjct: 798 QISDEALKLLSANGYDPVYGAR 819


>gi|146312713|ref|YP_001177787.1| protein disaggregation chaperone [Enterobacter sp. 638]
 gi|145319589|gb|ABP61736.1| ATPase AAA-2 domain protein [Enterobacter sp. 638]
          Length = 857

 Score =  783 bits (2023), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGSLVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLERRIIQLKLEQQALKKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+      Q +  + +      LL+ KV   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEK------QLEFAMQSEGKTMRLLRNKVTDVEIADVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEHDLHHRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L     ++
Sbjct: 734 YGHMKDLVMGVVSHSFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEDRGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDDALKLLSENGYDPVYGAR 815


>gi|187733901|ref|YP_001881380.1| protein disaggregation chaperone [Shigella boydii CDC 3083-94]
 gi|187430893|gb|ACD10167.1| ATP-dependent chaperone protein ClpB [Shigella boydii CDC 3083-94]
          Length = 857

 Score =  783 bits (2023), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 YISDEALKLLSENGYDPVYGAR 815


>gi|254509456|ref|ZP_05121533.1| ATPase, AAA family [Vibrio parahaemolyticus 16]
 gi|219547618|gb|EED24666.1| ATPase, AAA family [Vibrio parahaemolyticus 16]
          Length = 655

 Score =  783 bits (2022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/659 (56%), Positives = 515/659 (78%), Gaps = 17/659 (2%)

Query: 17  VLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKI 76
           ++IGEPGVGKTAIVEGLAQRI+N EVP  L  +++L LD+  L+AG KYRGEFE+RLK +
Sbjct: 1   MIIGEPGVGKTAIVEGLAQRIVNNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERLKSV 60

Query: 77  LKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQY 136
           L E+S  + +II+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EYRQY
Sbjct: 61  LNELSKEEGNIILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYRQY 120

Query: 137 IEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYIS 196
           IEKD A ERRFQK++V+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+RY+S
Sbjct: 121 IEKDPALERRFQKVIVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHRYVS 180

Query: 197 DRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLL 256
           DR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+D++S+KRL 
Sbjct: 181 DRQLPDKAIDLIDEAASSIRMQIDSKPEALDKLERKIIQLKIEQQALTNEHDDASEKRLN 240

Query: 257 LIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLK 316
           ++ +E+ + E ++A L+++W  EK  +  +Q IK E+E+ RL +  A R  D   +S+L+
Sbjct: 241 ILNEELAEKEREFAELDEVWNAEKAALSGTQHIKSELEQARLDMEFARRAGDLNRMSELQ 300

Query: 317 YGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVER 376
           YG + +LE+ L   +Q ++Q      + TLL+ KV   EIAE++S+ TGIPVSK+++ E+
Sbjct: 301 YGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDNEIAEVLSKQTGIPVSKMLEAEK 354

Query: 377 EKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCK 436
           EKLL +E +L KRV+GQ EA+  VS+AIRRSR+GLSD  +P GSF+FLGPTGVGKTELCK
Sbjct: 355 EKLLQMEEVLHKRVIGQTEAVEVVSDAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTELCK 414

Query: 437 TLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILL 496
           TL+  +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+ILL
Sbjct: 415 TLAHFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVILL 474

Query: 497 DEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEI 555
           DE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D E 
Sbjct: 475 DEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFGALDYEG 534

Query: 556 IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKIS 615
           +K  VM  V  +FRPEF+NR+D+ +VF  L +++I SIA+IQL  L +++      L++S
Sbjct: 535 MKEQVMEVVSKHFRPEFLNRVDESVVFHPLAQEHIKSIASIQLKRLSDRMEDKGYVLEVS 594

Query: 616 KAALKKISNIGFDLIYGARDV-HGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
             AL  I+ +GFD ++GAR +    ++S+         ++P A  I  G +I + P  L
Sbjct: 595 DKALDLIAQVGFDPVFGARPLKRAIQQSV---------ENPLAKAILAGRVIPEKPVKL 644


>gi|417282105|ref|ZP_12069405.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3003]
 gi|386246434|gb|EII88164.1| ATP-dependent chaperone protein ClpB [Escherichia coli 3003]
          Length = 857

 Score =  783 bits (2022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 497/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  +  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGVKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLARRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSENGYDPVYGAR 815


>gi|417140198|ref|ZP_11983448.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0259]
 gi|417311067|ref|ZP_12097861.1| Chaperone protein ClpB [Escherichia coli PCN033]
 gi|417690778|ref|ZP_12339998.1| ATP-dependent chaperone ClpB [Shigella boydii 5216-82]
 gi|332088101|gb|EGI93226.1| ATP-dependent chaperone ClpB [Shigella boydii 5216-82]
 gi|338767303|gb|EGP22129.1| Chaperone protein ClpB [Escherichia coli PCN033]
 gi|386156321|gb|EIH12666.1| ATP-dependent chaperone protein ClpB [Escherichia coli 97.0259]
          Length = 857

 Score =  783 bits (2022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEVATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSENGYDPVYGAR 815


>gi|410611339|ref|ZP_11322438.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
           psychrophila 170]
 gi|410169190|dbj|GAC36327.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
           psychrophila 170]
          Length = 864

 Score =  783 bits (2022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/622 (60%), Positives = 497/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+A L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRLLSLDMAALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDE+HT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDVARQEGNVILFIDEIHTIVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKD A ERRFQK+LVEEP IE+TI+ILRGL++KYEVHHGV ITD AIVAA+ LS R
Sbjct: 320 RKYIEKDTALERRFQKVLVEEPSIEDTIAILRGLKEKYEVHHGVAITDSAIVAATLLSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEA ++I++EIDS PE MDKL+RRLIQLKIE EA+K+E D++SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAGSRIRMEIDSMPEEMDKLDRRLIQLKIEREALKKETDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+N LE+++++L++ W  EK  ++   Q+KEE+E+ R ++  A R SD   +S
Sbjct: 440 RLNNLDEEVNVLELEFSDLKETWISEKAYVQGETQVKEELEQARRELEAARRASDLTRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG + +LE  L   SQ      N   + TLL+ KV  EEIAE+VS+ TGIPVSK++ 
Sbjct: 500 EIQYGRIPELEAKLIVVSQ------NQTKEMTLLRNKVTDEEIAEVVSKWTGIPVSKMLS 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EAI+AVS++IR SR+GL+D +RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLKMEEALHSRVIGQEEAITAVSDSIRSSRAGLADPQRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ E+SI+RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PY++
Sbjct: 614 LTKALAEFLFDTEDSIVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYAV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I ++   + 
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHLILDVAGEEN 733

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E IK  V+  V  +FRPEFINR+D+I+VF  L +  +  IA IQLN L  +L + ++ L
Sbjct: 734 YEEIKKRVLEVVGQHFRPEFINRLDEIVVFHPLKKDQVRQIAKIQLNYLHKRLAEQDLSL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS   +  I++ GFD +YGAR
Sbjct: 794 DISDNVVDVIADAGFDPVYGAR 815


>gi|91211926|ref|YP_541912.1| protein disaggregation chaperone [Escherichia coli UTI89]
 gi|117624816|ref|YP_853729.1| protein disaggregation chaperone [Escherichia coli APEC O1]
 gi|237706819|ref|ZP_04537300.1| heat shock protein [Escherichia sp. 3_2_53FAA]
 gi|422361379|ref|ZP_16442005.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 110-3]
 gi|91073500|gb|ABE08381.1| heat shock protein [Escherichia coli UTI89]
 gi|115513940|gb|ABJ02015.1| heat shock protein [Escherichia coli APEC O1]
 gi|226899859|gb|EEH86118.1| heat shock protein [Escherichia sp. 3_2_53FAA]
 gi|315284809|gb|EFU44254.1| ATP-dependent chaperone protein ClpB [Escherichia coli MS 110-3]
          Length = 861

 Score =  783 bits (2022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 497/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 264 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 324 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 384 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 444 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 504 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 558 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 618 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 738 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 797

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS   LK +S  G+D +YGAR
Sbjct: 798 HISDEVLKLLSENGYDPVYGAR 819


>gi|417729516|ref|ZP_12378211.1| chaperone protein clpB [Shigella flexneri K-671]
 gi|419192641|ref|ZP_13736093.1| chaperone protein ClpB [Escherichia coli DEC7E]
 gi|332754018|gb|EGJ84390.1| chaperone protein clpB [Shigella flexneri K-671]
 gi|378037994|gb|EHW00516.1| chaperone protein ClpB [Escherichia coli DEC7E]
          Length = 678

 Score =  783 bits (2022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/654 (57%), Positives = 513/654 (78%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 21  NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 80

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 81  KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 140

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 141 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 200

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 201 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 260

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 261 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 320

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 321 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 374

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 375 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 434

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 435 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 494

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 495 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 554

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 555 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 614

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            IS  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+L+
Sbjct: 615 HISDEALKLLSENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELV 660


>gi|429097512|ref|ZP_19159618.1| ClpB protein [Cronobacter dublinensis 582]
 gi|426283852|emb|CCJ85731.1| ClpB protein [Cronobacter dublinensis 582]
          Length = 823

 Score =  783 bits (2022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/622 (59%), Positives = 491/622 (78%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 166 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 225

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 226 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 285

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 286 RQYIEKDAALERRFQKVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 345

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQL    +A+ +E DE+SKK
Sbjct: 346 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLERRIIQLGDRQQALMKESDEASKK 405

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+N  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 406 RLDMLNDELNDKERQYSTLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 465

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 466 ELQYGKIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 519

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 520 SERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 579

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 580 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 639

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     D
Sbjct: 640 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALD 699

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V   FRPEFINRID+++VF  L +++I SIA IQL  L  +L      +
Sbjct: 700 YASMKELVMGVVGQSFRPEFINRIDEVVVFHPLGQQHIASIAQIQLQRLYQRLEDRGYAV 759

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  AL+ +   G+D +YGAR
Sbjct: 760 HISDEALQLLGENGYDPVYGAR 781


>gi|343511111|ref|ZP_08748296.1| hypothetical protein VIS19158_01764 [Vibrio scophthalmi LMG 19158]
 gi|343514770|ref|ZP_08751838.1| hypothetical protein VIBRN418_00225 [Vibrio sp. N418]
 gi|342799458|gb|EGU35024.1| hypothetical protein VIS19158_01764 [Vibrio scophthalmi LMG 19158]
 gi|342799507|gb|EGU35071.1| hypothetical protein VIBRN418_00225 [Vibrio sp. N418]
          Length = 857

 Score =  783 bits (2022), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/622 (58%), Positives = 500/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIIN EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINNEVPEGLRGRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  + ++I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELSKEEGNVILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKD A ERRFQK++V+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RKYMEKDPALERRFQKVIVDEPSVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I+++IDSKPE +DKLER++IQLKIE +A+  E+DE+S+K
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRMQIDSKPESLDKLERKIIQLKIEQQALINEHDEASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E  +A L+++W  EK  +  +Q IK E+E+ R+ +  A R  D   +S
Sbjct: 440 RLEMLNNELLEKERDFAELDEVWNAEKAALSGTQHIKSELEQARMDMEFARRAGDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + TLL+ KV   EIA+++S+ TGIPV+K+++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------EMTLLRNKVTDVEIADVLSKQTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L KRV+GQ EA+  VSNAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 AEKEKLLRMEQVLHKRVIGQKEAVEVVSNAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLATFMFDSEDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSARIQENFNTLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  VM  V  +FRPEF+NR+D+ +VF  L +++I SIA IQL  L  ++ +    +
Sbjct: 734 YQGIKNEVMEVVNKHFRPEFLNRVDESVVFHPLGQEHIKSIAAIQLLRLAKRMEERGYHM 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S+ AL  I+ +GFD +YGAR
Sbjct: 794 EVSEKALDLIAQVGFDPVYGAR 815


>gi|425278990|ref|ZP_18670226.1| ATP-dependent chaperone protein ClpB [Escherichia coli ARS4.2123]
 gi|408200376|gb|EKI25558.1| ATP-dependent chaperone protein ClpB [Escherichia coli ARS4.2123]
          Length = 798

 Score =  783 bits (2021), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/654 (57%), Positives = 512/654 (78%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  +  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 141 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGVKGRRVLALDMGALVAGAKYRGEFEERL 200

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 201 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 260

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 261 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 320

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L RR+IQLK+E +A+ +E DE+SKK
Sbjct: 321 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLARRIIQLKLEQQALMKESDEASKK 380

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 381 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 440

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 441 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 494

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 495 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 554

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 555 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 614

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 615 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 674

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 675 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 734

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            IS  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+L+
Sbjct: 735 HISDEALKLLSENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELV 780


>gi|406979232|gb|EKE01059.1| hypothetical protein ACD_21C00227G0001 [uncultured bacterium]
          Length = 867

 Score =  783 bits (2021), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/621 (60%), Positives = 509/621 (81%), Gaps = 6/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI+EGLAQRIINGEVP+ L +K +L LD+  L+AGTK+RGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIIEGLAQRIINGEVPDGLKNKLVLALDMGTLIAGTKFRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K ++ EI   +  II+FIDELH ++G GK EGS+DAGNMLKP L+RGEL CIGATTL+EY
Sbjct: 259 KSVINEIVKAEGQIILFIDELHMVVGAGKAEGSMDAGNMLKPALARGELRCIGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP + +TI+ILRGL++KYEVHHGV+I+D AIVAA+ LS+R
Sbjct: 319 RKYIEKDAALERRFQKVLVDEPSVTDTIAILRGLKEKYEVHHGVDISDSAIVAAATLSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++E+DSKPE +D+L R++IQLKIE EA+K+E DE+SK+
Sbjct: 379 YITDRNLPDKAIDLIDEAASRIRMEMDSKPEDLDRLNRKIIQLKIEREALKKETDEASKQ 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL+ ++K+++ LE +Y++L+++WK EK  ++  Q+IKE++++ +L++  A RK D   +S
Sbjct: 439 RLVDLEKQLSGLEKEYSSLDEVWKKEKATVQSEQKIKEDLDQAKLELEAAQRKMDLAKMS 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L+   Q +       ++  L++ KV  EE+AE+VS+ T IPVSK+++
Sbjct: 499 ELQYGKIPALEKQLQAALQAE------KSEMHLVRNKVTEEEVAEVVSKWTHIPVSKMLE 552

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL++E+ L KRV+GQDEA+ AV++AIRRSR+GL+D  +P GSFMFLGPTGVGKTE
Sbjct: 553 GEKEKLLHMEDALHKRVIGQDEAVKAVADAIRRSRAGLADPNKPIGSFMFLGPTGVGKTE 612

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
            CKTL+  +F+ E+++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE +RRKPY++
Sbjct: 613 TCKTLAEFLFDTEDAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAIRRKPYAV 672

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRN +IVMTSNLGS  I+E  K   
Sbjct: 673 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNCVIVMTSNLGSQYIQEFAKDGY 732

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           + IK AVM  V  +FRPEFINR+DDI+VF  L+ K I  IANIQ+  L+ +L + ++ ++
Sbjct: 733 DKIKKAVMEAVSKHFRPEFINRVDDIVVFHGLDSKQIHKIANIQIERLQKRLAERDLQIE 792

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  AL  ++  GFD +YGAR
Sbjct: 793 VSDKALDYLAEAGFDPVYGAR 813


>gi|420338046|ref|ZP_14839608.1| ATP-dependent chaperone ClpB [Shigella flexneri K-315]
 gi|391259920|gb|EIQ18994.1| ATP-dependent chaperone ClpB [Shigella flexneri K-315]
          Length = 823

 Score =  783 bits (2021), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 497/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 166 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 225

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 226 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 285

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 286 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 345

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 346 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 405

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 406 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 465

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 466 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 519

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 520 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 579

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 580 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 639

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 640 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 699

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 700 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 759

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS   LK +S  G+D +YGAR
Sbjct: 760 HISDEVLKLLSENGYDPVYGAR 781


>gi|145297344|ref|YP_001140185.1| chaperone clpB [Aeromonas salmonicida subsp. salmonicida A449]
 gi|418362096|ref|ZP_12962740.1| chaperone clpB [Aeromonas salmonicida subsp. salmonicida 01-B526]
 gi|142850116|gb|ABO88437.1| chaperone clpB [Aeromonas salmonicida subsp. salmonicida A449]
 gi|356686731|gb|EHI51324.1| chaperone clpB [Aeromonas salmonicida subsp. salmonicida 01-B526]
          Length = 857

 Score =  783 bits (2021), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/622 (59%), Positives = 502/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIG PGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGAPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGSLVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 260 KAVLSDLAKEEGNVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+K
Sbjct: 380 YIADRQLPDKAIDLIDEAAASIRLQIDSKPESLDRLERRIIQLKLEQQALMKEDDDASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI KEI + + +Y  L+++WK EK  +  +Q IK  +E+ R  ++ A R  D   +S
Sbjct: 440 RLDLISKEIGEKDREYNELDEVWKAEKAALAGTQHIKAALEQARQDLDVARRAGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + +LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEDKLHSRVIGQEEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ +++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALAEFLFDTQDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQEHHSEKD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  +M  +   FRPEFINRID+ +VF  L   +I SIA IQL  L  +L     ++
Sbjct: 734 YDEMKALLMEVLTRSFRPEFINRIDETVVFHPLGEDHIKSIARIQLKSLMGRLEAQGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S+A L+K+ + GFD +YGAR
Sbjct: 794 EVSEALLEKLVHAGFDPVYGAR 815


>gi|117619764|ref|YP_858496.1| ATP-dependent chaperone protein ClpB [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117561171|gb|ABK38119.1| ATP-dependent chaperone protein ClpB [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 857

 Score =  783 bits (2021), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/622 (58%), Positives = 504/622 (81%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIG PGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGAPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 260 KAVLNDLAKEEGNVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGDLHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+K
Sbjct: 380 YIADRQLPDKAIDLIDEAAASIRLQIDSKPESLDRLERRIIQLKLEQQALMKEDDDASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI +EI++ + +Y  L+++WK EK  +  +Q IK  +E+ R  ++ A R  D   +S
Sbjct: 440 RLELINQEISEKDREYNELDEVWKAEKAALAGTQHIKAALEQARQDLDVARRAGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + +LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEDQLHSRVIGQEEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ +++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALAEFLFDTQDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQEHHSEKD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  +M  +   FRPEFINRID+ +VF  L  ++I SIA IQL  L  +L     ++
Sbjct: 734 YDEMKGMLMEVLTRSFRPEFINRIDETVVFHPLGEEHIKSIARIQLKSLMGRLEAQGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           ++S+A L+K+ + GFD +YGAR
Sbjct: 794 EVSEALLEKLVHAGFDPVYGAR 815


>gi|406914738|gb|EKD53889.1| hypothetical protein ACD_60C00143G0031 [uncultured bacterium]
          Length = 862

 Score =  782 bits (2020), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 386/625 (61%), Positives = 509/625 (81%), Gaps = 13/625 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP  L  K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNREVPEGLQDKRLLALDLGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDLAKQEGQIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQ+ILV+EP + +TI+ILRGL+++YE+HHGVEITD A+VAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQRILVDEPSVPDTIAILRGLKERYELHHGVEITDSALVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++EIDSKPE +D L+RR+IQLKIE EA+K+E DE+SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAASNIRMEIDSKPEELDTLDRRVIQLKIEREALKKETDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++KE+ KLE +   LE IWK EK+ ++ +Q IK ++E+ RL+   A R  D   ++
Sbjct: 440 RLEKLEKELKKLESESDKLENIWKNEKSTLQGAQTIKSDLERARLEFETARRAGDLTRMA 499

Query: 314 KLKYGELNKLERILKEKS---QKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSK 370
           +L+YG + +LE+ L E S   +K+ Q         LL++KV  EEIAE+VS+ T IPVSK
Sbjct: 500 ELQYGLIPELEKKLTEASLAEKKETQ---------LLRSKVTEEEIAEVVSKWTHIPVSK 550

Query: 371 IVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVG 430
           +++ E+EKLL++E+ L KR++GQ +A++AV NAIRRSR+GLSD KRP GSF+FLGPTGVG
Sbjct: 551 MLESEKEKLLHMEDALHKRIIGQSQAVNAVCNAIRRSRAGLSDPKRPIGSFLFLGPTGVG 610

Query: 431 KTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKP 490
           KTELCK L+A +F+ EE++IRIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE+VRRKP
Sbjct: 611 KTELCKALAAFLFDTEEAVIRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTELVRRKP 670

Query: 491 YSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK 550
           YS+ILLDE+EKA+ DVFNILLQ+LDDGRLTD+ GRT++FRNTIIVMTSNLGS+ I+++ K
Sbjct: 671 YSVILLDEMEKAHHDVFNILLQVLDDGRLTDSHGRTVDFRNTIIVMTSNLGSELIQDISK 730

Query: 551 -GDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
            GD   +K AV+  V  +FRPEF+NRID+ +VF  L+R+ I SIA IQ + L+ +L + +
Sbjct: 731 HGDYFEMKEAVLKVVGQHFRPEFLNRIDETVVFHPLDREQIKSIAEIQFDRLRARLAEKD 790

Query: 610 MDLKISKAALKKISNIGFDLIYGAR 634
             L ++  AL  +++IG+D +YGAR
Sbjct: 791 YSLSMTHEALDYLASIGYDPVYGAR 815


>gi|423109769|ref|ZP_17097464.1| chaperone ClpB [Klebsiella oxytoca 10-5243]
 gi|376381138|gb|EHS93877.1| chaperone ClpB [Klebsiella oxytoca 10-5243]
          Length = 857

 Score =  782 bits (2020), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/654 (57%), Positives = 510/654 (77%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E D++S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDDASIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+   E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELADKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQDLHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 734 YGHMKEMVLGVVSQSFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            +S  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+LI
Sbjct: 794 HMSDEALKLLSENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839


>gi|262372812|ref|ZP_06066091.1| ATP-dependent chaperone ClpB [Acinetobacter junii SH205]
 gi|262312837|gb|EEY93922.1| ATP-dependent chaperone ClpB [Acinetobacter junii SH205]
          Length = 859

 Score =  782 bits (2020), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/623 (59%), Positives = 504/623 (80%), Gaps = 8/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP SL +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPESLKNKRVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY  HHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D  SK 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++++I + + +Y +LE+IWK EKTL++  ++ + E+++ R+ + KA R+ D    +
Sbjct: 437 EVNHLEQQIAEKQKEYNDLEEIWKAEKTLVEGDKKAQVELDQARVALEKAKREGDLAEAA 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ L+   Q ++   N   K  L++TKV   EIAE+VS  TGIPVSK++Q
Sbjct: 497 RLQYGVIPELQKRLE---QAEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVSKMLQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLLN+E  L  RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GEREKLLNMEEFLHNRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-- 551
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS  ++E+ +G  
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGAT 731

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E ++  VM+ V  +FRPEFINRID++++F  L +  I  IA+IQL+ L+++L   +M 
Sbjct: 732 DDE-VRTVVMSAVSQHFRPEFINRIDELVIFHSLQKAQIRGIADIQLDRLRSRLSDRDMG 790

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +   A   + + GFD IYGAR
Sbjct: 791 LTVDDTAFDLLIDAGFDPIYGAR 813


>gi|82778016|ref|YP_404365.1| protein disaggregation chaperone [Shigella dysenteriae Sd197]
 gi|309789454|ref|ZP_07684040.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 1617]
 gi|81242164|gb|ABB62874.1| heat shock protein [Shigella dysenteriae Sd197]
 gi|308922697|gb|EFP68218.1| ATP-dependent chaperone ClpB [Shigella dysenteriae 1617]
          Length = 857

 Score =  782 bits (2019), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 497/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIV A+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVVAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSENGYDPVYGAR 815


>gi|419927010|ref|ZP_14444753.1| protein disaggregation chaperone [Escherichia coli 541-1]
 gi|388408436|gb|EIL68782.1| protein disaggregation chaperone [Escherichia coli 541-1]
          Length = 857

 Score =  782 bits (2019), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 497/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+  VSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHHRVIGQNEAVDVVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSENGYDPVYGAR 815


>gi|387888298|ref|YP_006318596.1| ATP-dependent chaperone protein ClpB [Escherichia blattae DSM 4481]
 gi|414595937|ref|ZP_11445541.1| chaperone protein ClpB [Escherichia blattae NBRC 105725]
 gi|386923131|gb|AFJ46085.1| ATP-dependent chaperone protein ClpB [Escherichia blattae DSM 4481]
 gi|403193094|dbj|GAB83193.1| chaperone protein ClpB [Escherichia blattae NBRC 105725]
          Length = 858

 Score =  782 bits (2019), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/625 (59%), Positives = 497/625 (79%), Gaps = 13/625 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+++E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALRKEADEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++++E+   E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLEEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRNGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEEQLHDRVIGQNEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIK----EME 549
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+    E+ 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELN 733

Query: 550 KGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
            G    +K  V+  V   FRPEFINRID+++VF  L +++I SIA IQL  L  +L +  
Sbjct: 734 YGS---MKDLVLEVVSHNFRPEFINRIDEVVVFHPLGQQHIASIAQIQLQRLYKRLEERG 790

Query: 610 MDLKISKAALKKISNIGFDLIYGAR 634
             + IS  AL  +S  GFD +YGAR
Sbjct: 791 YSVHISAEALNLLSENGFDPVYGAR 815


>gi|218559513|ref|YP_002392426.1| protein disaggregation chaperone [Escherichia coli S88]
 gi|386600563|ref|YP_006102069.1| ATP-dependent chaperone protein ClpB [Escherichia coli IHE3034]
 gi|386603372|ref|YP_006109672.1| protein disaggregation chaperone [Escherichia coli UM146]
 gi|417086020|ref|ZP_11953301.1| protein disaggregation chaperone [Escherichia coli cloneA_i1]
 gi|419944842|ref|ZP_14461312.1| protein disaggregation chaperone [Escherichia coli HM605]
 gi|422750407|ref|ZP_16804318.1| ATP-dependent chaperone ClpB [Escherichia coli H252]
 gi|422754665|ref|ZP_16808491.1| ATP-dependent chaperone ClpB [Escherichia coli H263]
 gi|422840557|ref|ZP_16888527.1| chaperone ClpB [Escherichia coli H397]
 gi|432358930|ref|ZP_19602149.1| chaperone ClpB [Escherichia coli KTE4]
 gi|432363690|ref|ZP_19606853.1| chaperone ClpB [Escherichia coli KTE5]
 gi|432575473|ref|ZP_19811946.1| chaperone ClpB [Escherichia coli KTE55]
 gi|432588871|ref|ZP_19825226.1| chaperone ClpB [Escherichia coli KTE58]
 gi|432598715|ref|ZP_19834988.1| chaperone ClpB [Escherichia coli KTE62]
 gi|432755423|ref|ZP_19989970.1| chaperone ClpB [Escherichia coli KTE22]
 gi|432779502|ref|ZP_20013725.1| chaperone ClpB [Escherichia coli KTE59]
 gi|432788495|ref|ZP_20022624.1| chaperone ClpB [Escherichia coli KTE65]
 gi|432821941|ref|ZP_20055631.1| chaperone ClpB [Escherichia coli KTE118]
 gi|432823429|ref|ZP_20057112.1| chaperone ClpB [Escherichia coli KTE123]
 gi|433006053|ref|ZP_20194480.1| chaperone ClpB [Escherichia coli KTE227]
 gi|433008648|ref|ZP_20197063.1| chaperone ClpB [Escherichia coli KTE229]
 gi|433154671|ref|ZP_20339608.1| chaperone ClpB [Escherichia coli KTE176]
 gi|433164483|ref|ZP_20349217.1| chaperone ClpB [Escherichia coli KTE179]
 gi|433169557|ref|ZP_20354181.1| chaperone ClpB [Escherichia coli KTE180]
 gi|218366282|emb|CAR04034.1| protein disaggregation chaperone [Escherichia coli S88]
 gi|294493689|gb|ADE92445.1| ATP-dependent chaperone protein ClpB [Escherichia coli IHE3034]
 gi|307625856|gb|ADN70160.1| protein disaggregation chaperone [Escherichia coli UM146]
 gi|323951207|gb|EGB47083.1| ATP-dependent chaperone ClpB [Escherichia coli H252]
 gi|323957039|gb|EGB52765.1| ATP-dependent chaperone ClpB [Escherichia coli H263]
 gi|355350857|gb|EHG00053.1| protein disaggregation chaperone [Escherichia coli cloneA_i1]
 gi|371605986|gb|EHN94588.1| chaperone ClpB [Escherichia coli H397]
 gi|388417427|gb|EIL77270.1| protein disaggregation chaperone [Escherichia coli HM605]
 gi|430875662|gb|ELB99184.1| chaperone ClpB [Escherichia coli KTE4]
 gi|430885121|gb|ELC08048.1| chaperone ClpB [Escherichia coli KTE5]
 gi|431105099|gb|ELE09445.1| chaperone ClpB [Escherichia coli KTE55]
 gi|431119264|gb|ELE22272.1| chaperone ClpB [Escherichia coli KTE58]
 gi|431129647|gb|ELE31760.1| chaperone ClpB [Escherichia coli KTE62]
 gi|431301516|gb|ELF90722.1| chaperone ClpB [Escherichia coli KTE22]
 gi|431325766|gb|ELG13144.1| chaperone ClpB [Escherichia coli KTE59]
 gi|431336292|gb|ELG23411.1| chaperone ClpB [Escherichia coli KTE65]
 gi|431367010|gb|ELG53496.1| chaperone ClpB [Escherichia coli KTE118]
 gi|431379087|gb|ELG64023.1| chaperone ClpB [Escherichia coli KTE123]
 gi|431513111|gb|ELH91196.1| chaperone ClpB [Escherichia coli KTE227]
 gi|431522833|gb|ELH99978.1| chaperone ClpB [Escherichia coli KTE229]
 gi|431672931|gb|ELJ39163.1| chaperone ClpB [Escherichia coli KTE176]
 gi|431685703|gb|ELJ51270.1| chaperone ClpB [Escherichia coli KTE179]
 gi|431686554|gb|ELJ52115.1| chaperone ClpB [Escherichia coli KTE180]
          Length = 857

 Score =  782 bits (2019), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 497/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS   LK +S  G+D +YGAR
Sbjct: 794 HISDEVLKLLSENGYDPVYGAR 815


>gi|365847002|ref|ZP_09387499.1| ATP-dependent chaperone protein ClpB [Yokenella regensburgei ATCC
           43003]
 gi|364573153|gb|EHM50666.1| ATP-dependent chaperone protein ClpB [Yokenella regensburgei ATCC
           43003]
          Length = 861

 Score =  782 bits (2019), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/622 (59%), Positives = 500/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLSLDMGALVAGAKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 264 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 324 RQFIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S+K
Sbjct: 384 YISDRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASRK 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 444 RLDMLNEELDDKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ +V   EIA++++R TGIPV+++++
Sbjct: 504 ELQYGKIPELEKQLASATQSE------GKTMRLLRNRVTDVEIADVLARWTGIPVARMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 558 SERDKLLRMEQDLHQRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 618 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA+IQL  L  +L +   ++
Sbjct: 738 YSHMKDLVLGVVSHSFRPEFINRIDEVVVFHPLGEKHIASIASIQLQRLYKRLEERGYEV 797

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 798 HISDDALKLLSENGYDPVYGAR 819


>gi|423125257|ref|ZP_17112936.1| chaperone ClpB [Klebsiella oxytoca 10-5250]
 gi|376399224|gb|EHT11842.1| chaperone ClpB [Klebsiella oxytoca 10-5250]
          Length = 857

 Score =  782 bits (2019), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/654 (57%), Positives = 510/654 (77%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+   E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 734 YSHMKDLVLGVVSQSFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            +S  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+LI
Sbjct: 794 HLSDEALKLLSENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839


>gi|402840625|ref|ZP_10889087.1| ATP-dependent chaperone protein ClpB [Klebsiella sp. OBRC7]
 gi|423104334|ref|ZP_17092036.1| chaperone ClpB [Klebsiella oxytoca 10-5242]
 gi|376382906|gb|EHS95635.1| chaperone ClpB [Klebsiella oxytoca 10-5242]
 gi|402285341|gb|EJU33827.1| ATP-dependent chaperone protein ClpB [Klebsiella sp. OBRC7]
          Length = 857

 Score =  782 bits (2019), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/654 (57%), Positives = 510/654 (77%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+   E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 734 YSHMKDLVLGVVSQSFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            +S  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+LI
Sbjct: 794 HLSDEALKLLSENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839


>gi|375256817|ref|YP_005015987.1| protein disaggregation chaperone [Klebsiella oxytoca KCTC 1686]
 gi|365906295|gb|AEX01748.1| protein disaggregation chaperone [Klebsiella oxytoca KCTC 1686]
          Length = 857

 Score =  782 bits (2019), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/654 (57%), Positives = 510/654 (77%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+   E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 734 YSHMKELVLGVVSQSFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            +S  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+LI
Sbjct: 794 HLSDEALKLLSENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839


>gi|421495516|ref|ZP_15942797.1| ATP-dependent chaperone protein ClpB [Aeromonas media WS]
 gi|407185455|gb|EKE59231.1| ATP-dependent chaperone protein ClpB [Aeromonas media WS]
          Length = 857

 Score =  782 bits (2019), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/623 (59%), Positives = 499/623 (80%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIG PGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGAPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+F+DELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLSDLAKEEGNVILFVDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQY+EKDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA++LS+R
Sbjct: 320 RQYVEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAQLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAAA I+++IDSKPE +D+LERR+IQLK+E +A+ +E D++S+K
Sbjct: 380 YIADRQLPDKAIDLIDEAAASIRLQIDSKPESLDRLERRIIQLKLEQQALMKEDDDASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L+  E+ + E +Y  LE++WK EK  +  +Q IK  +E+ R  +  A R  D   +S
Sbjct: 440 RLDLLNHELAEKEREYNELEEVWKAEKAALAGTQHIKAALEQARQDLEVARRAGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++Q      + +LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGRIPELEKQLDLATQAEMQ------ETSLLRNRVTDVEIADVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEDQLHSRVIGQEEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ +++++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALAEFLFDTQDAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE--MEKG 551
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   EK 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHYAEK- 732

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E +K  +M  +   FRPEFINRID+ +VF  L   +I SIA IQL  L  +L     +
Sbjct: 733 DYEEMKALLMELLTRSFRPEFINRIDETVVFHPLGEDHIKSIARIQLKSLMGRLEAQGYE 792

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           +++S+  L K+ + GFD +YGAR
Sbjct: 793 VEVSEELLTKLVHAGFDPVYGAR 815


>gi|397659422|ref|YP_006500124.1| clpB protein [Klebsiella oxytoca E718]
 gi|394347603|gb|AFN33724.1| ClpB protein [Klebsiella oxytoca E718]
          Length = 823

 Score =  781 bits (2018), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/654 (57%), Positives = 510/654 (77%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 166 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 225

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 226 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 285

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 286 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 345

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S K
Sbjct: 346 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASIK 405

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+   E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 406 RLDMLNEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 465

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 466 ELQYGKIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 519

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 520 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 579

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 580 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 639

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     D
Sbjct: 640 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALD 699

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 700 YSHMKELVLGVVSQSFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEV 759

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            +S  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+LI
Sbjct: 760 HLSDEALKLLSENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 805


>gi|383936980|ref|ZP_09990396.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Rheinheimera
           nanhaiensis E407-8]
 gi|383701961|dbj|GAB60487.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Rheinheimera
           nanhaiensis E407-8]
          Length = 858

 Score =  781 bits (2018), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/662 (56%), Positives = 518/662 (78%), Gaps = 15/662 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLA RI+N EVP  L  K++L LD+  LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLALRIVNKEVPEGLKDKRVLSLDMGSLLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELAKEEGQVILFIDEIHTMVGAGKADGAMDAGNMLKPALARGELHCLGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVEEPTVEDTIAILRGLKERYELHHAVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E  A+ +E DE++KK
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRMQMDSKPEELDRLERRIIQLKLEDNALAKETDEATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R  +I+++I +L+ KY  L+++W+ EK  ++ +Q IK E+E+ RL +  A R SD Q +S
Sbjct: 440 RRDMIQEQIRELDAKYNELDEVWESEKAALQGTQNIKTELEQARLDLEVARRASDLQRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   SQ ++      ++ TLL+ KV  +EIA+++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKKLDLASQAEM------HENTLLRNKVTEQEIADVLSKATGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  +V+GQDEA++AVS+AIRRSR+ L+D  +P GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEQALHDKVIGQDEAVTAVSHAIRRSRACLADPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K+L+  +F++ ++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LTKSLANFLFDSPDAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E  +   
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDLIQEHYREYS 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  +M  +   FRPEF+NR+D+ +VF  L+ + I SIA IQL  L+ +L +     
Sbjct: 734 YSQMKEMLMGVLSKQFRPEFLNRLDETVVFHPLDSRQIRSIARIQLARLEQRLAERQYQF 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
            IS AAL K++ +GFD +YGAR +   K+++     + H ++P A  +  GD+      +
Sbjct: 794 SISDAALDKLAEVGFDPLYGARPL---KRAI-----QQHLENPLAQALLQGDVPPGSTVA 845

Query: 673 LD 674
           LD
Sbjct: 846 LD 847


>gi|89093544|ref|ZP_01166492.1| ClpB protein [Neptuniibacter caesariensis]
 gi|89082234|gb|EAR61458.1| ClpB protein [Oceanospirillum sp. MED92]
          Length = 859

 Score =  781 bits (2018), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/622 (59%), Positives = 504/622 (81%), Gaps = 4/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K +L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKLVLSLDMGALIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKQEGQIILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQY+EKDAA ERRFQK+ V+EPD E TI+ILRGL+++YE+HH V+ITD AI+AA++LS R
Sbjct: 320 RQYVEKDAALERRFQKVQVDEPDEESTIAILRGLKERYEIHHSVDITDSAIIAAAKLSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++E+DSKPE MD+LERRLIQLK+E EA+K+E D ++K+
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEMDSKPEDMDRLERRLIQLKMEREALKKEKDAAAKQ 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++  I  +E ++++L+++WK EK  ++ SQQIKEE++  R+++ K TR  D Q +S
Sbjct: 440 RLAELESTIQSIEKEFSDLDEVWKAEKVALQGSQQIKEELDLARIELEKFTRAGDLQKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG   K+  + K+ +       +   +  LL+ KV  EE+AE+VSR TGIPVSK+++
Sbjct: 500 ELQYG---KIPELEKKLAAAAEAEESGQQEMKLLRNKVTEEEVAEVVSRWTGIPVSKMLE 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L  RVVGQ+EA++AVSNA+RRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 557 GERDKLLRMESTLHNRVVGQEEAVTAVSNAVRRSRAGLADPNRPNGSFLFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F+ EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 617 LCKALASFLFDTEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGD 552
           +LLDE+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNTI+VMTSNLGSD I+   +  D
Sbjct: 677 LLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTIVVMTSNLGSDLIQNFSDDDD 736

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            +++  AVM  V ++FRPE INRID+++VF  L +  +  IA IQL  L+++L +  + L
Sbjct: 737 YQLMHNAVMEAVGVHFRPEVINRIDEVVVFHSLQKSQVAGIAKIQLQRLQSRLAERELSL 796

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            ++  A+ K+ ++GF+ IYGAR
Sbjct: 797 TLTSTAMDKLVDVGFEPIYGAR 818


>gi|440757483|ref|ZP_20936668.1| ClpB protein [Pantoea agglomerans 299R]
 gi|436428729|gb|ELP26381.1| ClpB protein [Pantoea agglomerans 299R]
          Length = 857

 Score =  781 bits (2018), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/622 (59%), Positives = 495/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLSDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPGVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALKKEADDASIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ E+N+ E +YA LE  WK EK  +  +Q IK E+E+ RL + +A R+ D   +S
Sbjct: 440 RLEMLETELNQKEREYAELEDEWKTEKASLSGTQNIKAELEQARLNLEQARRQGDLAQMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L   +Q +           LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGKIPALEKQLAAATQAE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E +KLL +E  L  RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GELDKLLRMEQDLHGRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKSLANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRN++++MTSNLGSD I+E      
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNSVVIMTSNLGSDLIQERFGNLS 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V  +FRPEF+NRID+++VF  L  K+I SIA IQL  L  +L +    L
Sbjct: 734 YPEMKDIVMGVVGQHFRPEFVNRIDEVVVFHPLAEKHIASIAQIQLQRLYKRLDERGYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  A+K ++  G+D +YGAR
Sbjct: 794 HISDDAIKLLAENGYDPVYGAR 815


>gi|238897711|ref|YP_002923390.1| ATP-dependent protease, Hsp 100 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|229465468|gb|ACQ67242.1| ATP-dependent protease, Hsp 100 [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 857

 Score =  781 bits (2018), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/662 (56%), Positives = 514/662 (77%), Gaps = 15/662 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIG PGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGAPGVGKTAIVEGLAQRIVNGEVPEGLKKKRVLSLDMGALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK++S     +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLKDLSKQGGSVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS R
Sbjct: 320 RQYIEKDPALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAASLSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAAA I+++IDSKPE +DKLERR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAAASIRMQIDSKPEALDKLERRIIQLKLEQQALNKEQDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ K E +Y+ LE+ WK EK  +  +Q IK ++E+ ++ + +A R SD   +S
Sbjct: 440 RLKMLNDELEKKERQYSELEEEWKAEKASLTGTQNIKAQLEEAKITLEQARRVSDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG++  LE+ L+  ++K++      +   LL+ +V   EIAE+++R TGIPV ++++
Sbjct: 500 EMQYGKIPALEKQLQAATEKEM------SSMKLLRNRVTDIEIAEVLARWTGIPVDRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L ++V+GQ+EA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEENLHQQVIGQNEAVIAVSNALRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKH++SRL+GAPPGY+GYE+GGYLTE VRR+PYS+
Sbjct: 614 LCKALAYFLFSSKDAMVRIDMSEFMEKHTVSRLLGAPPGYVGYEQGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E   + D
Sbjct: 674 VLLDEVEKAHQDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQERFSQAD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K +VM  V+ YFRPEFINRID+++VF  L  +++ SIA IQL  L  +L +     
Sbjct: 734 YSDMKKSVMEVVRRYFRPEFINRIDEVVVFHPLEAQHLESIAQIQLKQLYQRLEEKGYTA 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
            I+ +AL  ++  G+D +YGAR +   K+++   +     ++P A  I  G LI   P  
Sbjct: 794 GITPSALGFLTKEGYDPVYGARPL---KRAIQQEI-----ENPLAQQILSGQLIPGMPIV 845

Query: 673 LD 674
           LD
Sbjct: 846 LD 847


>gi|410638111|ref|ZP_11348676.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
           lipolytica E3]
 gi|410142308|dbj|GAC15881.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Glaciecola
           lipolytica E3]
          Length = 856

 Score =  781 bits (2018), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/653 (58%), Positives = 518/653 (79%), Gaps = 15/653 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIIN EVP  L +K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINSEVPEGLKNKRVLSLDMGSLVAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGRVILFIDELHTMVGAGKGEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV++P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDQPSVEDTIAILRGLKERYELHHSVDITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++++DSKPE MD+LERR+IQLK+E +A+ +E DE+S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRLQMDSKPEDMDRLERRIIQLKLEEQALSKEKDEASQK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI+ E  + E K+A  E IW+ EK+ ++ +Q IK E+E+ +L +  A R SD   +S
Sbjct: 440 RLELIELEREQAENKFAEFEAIWQAEKSAMQGTQHIKSELEQAKLDMEIARRASDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE  L++ S+ +        +  LLK KV   EIA+++SR TGIPV+K+++
Sbjct: 500 ELQYGRIPELELKLEQASEAE------QTETQLLKNKVTEIEIADVLSRWTGIPVNKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +E  L  RV+GQ EA++AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKDKLLRMEESLQNRVIGQTEAVNAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ E++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAGFMFDTEQAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSN+GSD I++  ++  
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNIGSDVIQDKHQESQ 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E +K  VM  V+  FRPEFINRIDD++VF  L  + I +IA IQL  L+ +LL+    L
Sbjct: 734 YEEMKELVMRTVEQQFRPEFINRIDDVVVFHPLGLEQIKAIAKIQLLSLRQRLLEKGFKL 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDL 665
           ++S+AAL+KI+  GFD +YGAR +   K+++ + +     ++P A  +  GD+
Sbjct: 794 ELSQAALEKIALAGFDPVYGARPL---KRAIQMEI-----ENPLAQRLLAGDM 838


>gi|429085706|ref|ZP_19148669.1| ClpB protein [Cronobacter condimenti 1330]
 gi|426545026|emb|CCJ74710.1| ClpB protein [Cronobacter condimenti 1330]
          Length = 861

 Score =  781 bits (2017), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/622 (59%), Positives = 493/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGSLVAGAKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 264 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V +P +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 324 RQYIEKDAALERRFQKVFVAQPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 384 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+   E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 444 RLDMLNDELTDKERQYSALEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 504 ELQYGKIPELEKQLAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 558 SERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GA PGY+GYEEGGYLTE VRR+PYS+
Sbjct: 618 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGALPGYVGYEEGGYLTEAVRRRPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     D
Sbjct: 678 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALD 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V   FRPEFINRID+++VF  L +++I SIA IQL  L  +L      +
Sbjct: 738 YASMKELVMGVVGQSFRPEFINRIDEVVVFHPLGQQHIASIAQIQLQRLYQRLEDRGYAV 797

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +IS  AL+ +   G+D +YGAR
Sbjct: 798 RISDEALQLLGENGYDPVYGAR 819


>gi|397171671|ref|ZP_10495070.1| ATP-dependent protease [Alishewanella aestuarii B11]
 gi|396086679|gb|EJI84290.1| ATP-dependent protease [Alishewanella aestuarii B11]
          Length = 859

 Score =  781 bits (2017), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/623 (59%), Positives = 505/623 (81%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP  L  K++L LD+  LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNKEVPEGLKDKRVLSLDMGALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  II+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNEVAKEEGQIILFIDEIHTMVGAGKADGAMDAGNMLKPALARGELHCLGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVEEPTVEDTIAILRGLKERYELHHAVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E  A+ +E D++SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQMDSKPEELDRLERRIIQLKLEDNALAKETDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R   I+++I++LE +Y  L+++W+ EK  ++ +Q IK ++E+ RL +  A R SD Q +S
Sbjct: 440 RRDSIREQIDELEQRYNELDEVWESEKAALQGTQYIKADLEQARLDLEVARRASDLQRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   SQ ++Q      + TLL+ KV  +EIA++VS+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKKLDLASQAEMQ------EMTLLRHKVTDQEIADVVSKATGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  +VVGQ EA+SAV+NAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEEALHDKVVGQHEAVSAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++ ++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LTKALAQFLFDSPDAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE--MEKG 551
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+N +I+MTSNLGSD I+E   E  
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNAVIIMTSNLGSDLIQEHYREYS 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E +K  +M+ +   FRPEF+NR+D+ +VF  L+ + I  IA+IQL  L+ +L + +  
Sbjct: 734 YAE-MKTMLMDVLSRQFRPEFLNRLDESVVFHPLDDRQIKQIASIQLQRLRQRLQQRDFQ 792

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L++S AAL+K++ +GFD +YGAR
Sbjct: 793 LEVSDAALEKLAEVGFDTLYGAR 815


>gi|337755940|ref|YP_004648451.1| ClpB protein [Francisella sp. TX077308]
 gi|336447545|gb|AEI36851.1| ClpB protein [Francisella sp. TX077308]
          Length = 860

 Score =  781 bits (2016), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/621 (59%), Positives = 504/621 (81%), Gaps = 4/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIIN EVP  +  KK+L LD+  LLAG K+RG+FE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINNEVPEGIKGKKVLSLDMGALLAGAKFRGDFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE++    ++I+FIDELHTM+G GK EGS+DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 260 KSVLKELAKQDGNVILFIDELHTMVGAGKSEGSMDAGNMLKPALARGELKCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+Y+EKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV ITD AIV+A+ LS+R
Sbjct: 320 REYVEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVNITDSAIVSAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDL+DEA ++I++EIDSKPE M+ L RR+IQLK++ E +K+E DE++KK
Sbjct: 380 YISDRQLPDKAIDLVDEAGSQIRMEIDSKPEKMESLYRRIIQLKMQREQLKKEKDEATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++K+EI  LE +Y   E++WK EK  ++ + ++KE++EK + ++ K  R  D   +S
Sbjct: 440 RLEILKEEIKGLESEYKGFEELWKAEKLKMQGASKLKEKLEKAKFELEKYQRSGDLTKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE  +K+  + + +   N     L++T V   EIA++VS+ TGIPVSK+++
Sbjct: 500 ELQYGVIPELETQIKQIEETEAEPSEN----KLVRTSVTENEIADVVSKATGIPVSKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLLN+E+ L KRV+GQD+AI AVSNA+RRSRSGLSD  RP GSFMFLGPTGVGKTE
Sbjct: 556 EEKEKLLNMESFLHKRVIGQDQAIKAVSNAVRRSRSGLSDPNRPIGSFMFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+++++++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS+
Sbjct: 616 LTKALAEFLFDDQDAMLRVDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEHVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS KI+EM+  D 
Sbjct: 676 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHKIQEMQDQDY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AVM  V  +FRPEF+NR+DD IVF  LN++ I  IA IQ+  L+ +L  + + L+
Sbjct: 736 ETVKSAVMEMVLSHFRPEFVNRVDDAIVFEPLNKEMITEIAKIQIKRLEKRLTDLEIALE 795

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           ++  A+ K+++ GFD ++GAR
Sbjct: 796 VTPNAIDKLADAGFDPVFGAR 816


>gi|333925693|ref|YP_004499272.1| ATP-dependent chaperone ClpB [Serratia sp. AS12]
 gi|333930646|ref|YP_004504224.1| ATP-dependent chaperone ClpB [Serratia plymuthica AS9]
 gi|386327517|ref|YP_006023687.1| ATP-dependent chaperone ClpB [Serratia sp. AS13]
 gi|421781776|ref|ZP_16218240.1| ATP-dependent chaperone protein ClpB [Serratia plymuthica A30]
 gi|333472253|gb|AEF43963.1| ATP-dependent chaperone ClpB [Serratia plymuthica AS9]
 gi|333489753|gb|AEF48915.1| ATP-dependent chaperone ClpB [Serratia sp. AS12]
 gi|333959850|gb|AEG26623.1| ATP-dependent chaperone ClpB [Serratia sp. AS13]
 gi|407756109|gb|EKF66228.1| ATP-dependent chaperone protein ClpB [Serratia plymuthica A30]
          Length = 857

 Score =  781 bits (2016), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/621 (59%), Positives = 497/621 (80%), Gaps = 7/621 (1%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG KYRGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L ++S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEYR
Sbjct: 261 GVLSDLSKQEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           QYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RY
Sbjct: 321 QYIEKDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           ISDR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKKR
Sbjct: 381 ISDRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L ++  E+ + E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ + +A R  D   +S+
Sbjct: 441 LEMLSSELEQKEREYSELEEEWKAEKASLSGTQNIKAELEQAKITLEQARRVGDLGRMSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG++ +LE+ L   +Q +           LL+ +V   EIAE+++R TGIPV+++++ 
Sbjct: 501 LQYGKIPELEKQLAAATQAE------GKTMKLLRNRVTDAEIAEVLARATGIPVARMLEG 554

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           ER+KLL +E  L  RV+GQDEA++AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTEL
Sbjct: 555 ERDKLLRLEQELHSRVIGQDEAVTAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTEL 614

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L++ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+I
Sbjct: 615 CKALASFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVI 674

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDK 553
           LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + + 
Sbjct: 675 LLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNY 734

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K +VM  V  +FRPEFINRID+++VF  L +K+I  IA IQL  L  +L +   ++ 
Sbjct: 735 AQMKESVMEMVTHHFRPEFINRIDEVVVFHPLGQKHIAEIAKIQLARLYKRLEERGYEVT 794

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +++ AL  +   G+D +YGAR
Sbjct: 795 MTEPALALLGQTGYDPVYGAR 815


>gi|320539058|ref|ZP_08038732.1| protein disaggregation chaperone [Serratia symbiotica str. Tucson]
 gi|320030898|gb|EFW12903.1| protein disaggregation chaperone [Serratia symbiotica str. Tucson]
          Length = 859

 Score =  780 bits (2015), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  +I+FIDELH M+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLSDLAKQEGSVILFIDELHIMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ + +A R  D   +S
Sbjct: 440 RLEMLSSELEQKEREYSELEEEWKAEKASLSGTQNIKAELEQAKITLEQARRVGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE+ L   +Q +       N   LL+ +V   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKLPELEKQLAAATQAE------GNTMKLLRNRVTDAEIAEVLARATGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQDEA+SAVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRLEQELHSRVIGQDEAVSAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L++ +F+++E+I+RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALASFLFDSDEAIVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFN+LLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD ++E   +  
Sbjct: 674 ILLDEVEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLVQEHFGQMS 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E +K +VM  V  +FRPEFINRID+++VF  L++ +I  I  IQL  L  +L +   ++
Sbjct: 734 YEQMKESVMEMVSHHFRPEFINRIDEVVVFHPLSQNHIAEIVKIQLARLYKRLEERGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +++ AL+ +   GFD +YGAR
Sbjct: 794 TMTEPALELLGKTGFDPVYGAR 815


>gi|378581052|ref|ZP_09829702.1| protein disaggregation chaperone [Pantoea stewartii subsp.
           stewartii DC283]
 gi|377816131|gb|EHT99236.1| protein disaggregation chaperone [Pantoea stewartii subsp.
           stewartii DC283]
          Length = 857

 Score =  780 bits (2015), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 497/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLSDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEALDRLERRIIQLKLEQQALKKESDDASVK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ E+N+ E +YA LE+ WK EK  +  +Q IK E+E+ RL++ +A R  D   +S
Sbjct: 440 RLEMLEAELNQKEREYAELEEEWKAEKASLTGTQNIKAELEQARLQLEQARRSGDLAQMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L   +Q +           LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGKIPALEKQLASATQSE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQDEA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEQELHSRVIGQDEAVEAVSNAIRRSRAGLADPNRPVGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKSLANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     +
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGNLN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V  +FRPEF+NRID+++VF  L  K+I SIA IQL  L  +L      L
Sbjct: 734 YAEMKGVVMGVVGQHFRPEFVNRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEDRGYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS AA+K +   G+D +YGAR
Sbjct: 794 HISDAAIKLLGENGYDPVYGAR 815


>gi|402758389|ref|ZP_10860645.1| clpB [Acinetobacter sp. NCTC 7422]
          Length = 859

 Score =  780 bits (2015), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/623 (59%), Positives = 502/623 (80%), Gaps = 8/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY  HHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D  SK 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++++I + + +Y +LE+IWK EKTL++  ++ + E+++ R+ + KA R+ D    +
Sbjct: 437 EVNHLEQQIAEKQKEYNDLEEIWKAEKTLVEGDKKAQVELDQARVALEKAKREGDLAEAA 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ L+   Q ++   N   K  L++TKV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 RLQYGVIPELQKRLE---QAEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMLQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLLN+E  L  RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GEREKLLNMEEFLHNRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-- 551
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR I+F+NT+IVMTSNLGS  ++E+ +G  
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVIDFKNTVIVMTSNLGSQDVRELGEGAT 731

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E ++  VMN V  +FRPEFINRID++++F  L +  I  IA+IQL+ L+ +L   +M 
Sbjct: 732 DDE-VRTVVMNAVTQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRARLSDRDMG 790

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +   A   + + GFD +YGAR
Sbjct: 791 LTVDDTAFDILIDAGFDPVYGAR 813


>gi|407794890|ref|ZP_11141910.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
           [Idiomarina xiamenensis 10-D-4]
 gi|407210650|gb|EKE80528.1| ATP-binding subunit of Clp protease and DnaK/DnaJ chaperones
           [Idiomarina xiamenensis 10-D-4]
          Length = 857

 Score =  780 bits (2015), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/658 (58%), Positives = 515/658 (78%), Gaps = 15/658 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIG+PGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  LLAG K+RGEFE+RL
Sbjct: 200 NNPVLIGDPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGALLAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGQVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP + +TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVLVDEPTVADTIAILRGLKERYELHHAVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA ++I+++IDSKPE +D+LERR+IQLK+E +A+++E D++SKK
Sbjct: 380 YISDRKLPDKAIDLIDEAGSRIRMQIDSKPEDLDRLERRIIQLKLEQQALQKEKDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L+++E+++ E K+  LE++W  EK  ++ +Q IK ++E+ R  ++ A R  D   +S
Sbjct: 440 RLDLLQEELDEQERKFKELEEVWNTEKAAVQGTQNIKAQLEQARTDMDIARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LER      Q D+ L       +LLK +V  EE+AE++SR TGIPV+K+++
Sbjct: 500 ELQYGRIPALER------QLDLALQAEMQDMSLLKNRVTDEEVAEVLSRWTGIPVNKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RVVGQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEQQLHSRVVGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ + +++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LSKALAQFLFDTDSAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E   +  
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQEKANEHT 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E +K AVM+ +  +FRPEF+NR+D+ +VF  L++ NI  IA IQL  L  +L + +  L
Sbjct: 734 YEEMKAAVMDVLVHHFRPEFLNRVDETVVFHPLSKANIKHIAEIQLQNLLQRLQERDYQL 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGP 670
           ++  AAL  I++ GFD +YGAR +   K+++   L     ++P A  I  G+L    P
Sbjct: 794 QLDDAALALIADAGFDPVYGARPL---KRAIQQQL-----ENPLAQRILAGELTPDKP 843


>gi|261493173|ref|ZP_05989704.1| endopeptidase ClpA [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261495905|ref|ZP_05992327.1| endopeptidase ClpA [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261308426|gb|EEY09707.1| endopeptidase ClpA [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261311176|gb|EEY12348.1| endopeptidase ClpA [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 855

 Score =  780 bits (2015), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/623 (59%), Positives = 506/623 (81%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 258 KAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 318 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++
Sbjct: 378 YVSDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+   E +Y+ LE+IWK EK+ +  +Q IK E+E  R+ +++A R++D++ +S
Sbjct: 438 RLAKLDEEMAAKEREYSELEEIWKAEKSALLGTQHIKSELENARIAMDQARRENDFEKMS 497

Query: 314 KLKYGELNKLERILK--EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +L+YG +  LE+ L+  E  +K      NA+   LL+TKV  EEIAE++S+ TGIPV+K+
Sbjct: 498 ELQYGVIPNLEKQLQAVENGEK------NADA-QLLRTKVTEEEIAEVLSKATGIPVAKM 550

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ E+EKLL +E +L  RV+GQ+EA+ AV+NAIRRSR+GLSD  +P GSF+FLGPTGVGK
Sbjct: 551 MEGEKEKLLRMEEVLHARVIGQNEAVDAVTNAIRRSRAGLSDPNKPIGSFLFLGPTGVGK 610

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TEL KTL+  +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR PY
Sbjct: 611 TELSKTLANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRHPY 670

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           S++LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+E    
Sbjct: 671 SVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIRENAYK 730

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             +++K  VM  V  +FRPEFINRID+ ++F  L +++I SIA IQL  L  +L +   +
Sbjct: 731 GYDVVKEMVMEVVGQHFRPEFINRIDETVMFHSLGQEHIRSIAKIQLQRLIQRLAERGYE 790

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           + ++ AAL  I   GFD ++GAR
Sbjct: 791 VTVTDAALDHIGKAGFDPLFGAR 813


>gi|448240622|ref|YP_007404675.1| protein disaggregation chaperone [Serratia marcescens WW4]
 gi|445210986|gb|AGE16656.1| protein disaggregation chaperone [Serratia marcescens WW4]
 gi|453064614|gb|EMF05578.1| protein disaggregation chaperone [Serratia marcescens VGH107]
          Length = 857

 Score =  780 bits (2015), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/621 (58%), Positives = 499/621 (80%), Gaps = 7/621 (1%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG KYRGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L +++  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 261 GVLNDLAKQEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           QYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RY
Sbjct: 321 QYIEKDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKKR
Sbjct: 381 IADRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L ++  E+ + E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ + +A R  D   +S+
Sbjct: 441 LEMLSDELGQKEREYSELEEEWKAEKASLSGTQNIKAELEQAKITLEQARRVGDLGRMSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG++ +LE+ L   +Q +           LL+ +V   EIAE+++R TGIPV+++++ 
Sbjct: 501 LQYGKIPELEKQLAAATQAE------GKSMKLLRNRVTDAEIAEVLARATGIPVARMLEG 554

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           ER+KLL +E  L  RV+GQDEA+SAVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTEL
Sbjct: 555 ERDKLLRLEQELHSRVIGQDEAVSAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTEL 614

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L++ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+I
Sbjct: 615 CKALASFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVI 674

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDK 553
           LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + + 
Sbjct: 675 LLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNY 734

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K +VM  V  +FRPEFINRID+++VF  L  K+I +IA IQL+ L  +L +   ++ 
Sbjct: 735 AQMKESVMEMVSHHFRPEFINRIDEVVVFHPLGEKHIAAIAKIQLSRLYKRLEERGYEVT 794

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +++ AL  +S  G+D +YGAR
Sbjct: 795 MTEPALALLSKTGYDPVYGAR 815


>gi|375109099|ref|ZP_09755353.1| ATP-dependent protease [Alishewanella jeotgali KCTC 22429]
 gi|374571285|gb|EHR42414.1| ATP-dependent protease [Alishewanella jeotgali KCTC 22429]
          Length = 859

 Score =  780 bits (2014), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/623 (60%), Positives = 504/623 (80%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP  L  K++L LD+  LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNKEVPEGLKDKRVLSLDMGALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  II+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNEVAKEEGQIILFIDEIHTMVGAGKADGAMDAGNMLKPALARGELHCLGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVEEPTVEDTIAILRGLKERYELHHAVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E  A+ +E DE+SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQMDSKPEELDRLERRIIQLKLEDNALAKETDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R   I+++I++LE +Y  L+++W+ EK  ++ +Q IK ++E+ RL +  A R SD Q +S
Sbjct: 440 RRDSIREQIDELEQRYNELDEVWESEKAALQGTQYIKADLEQARLDLEVARRASDLQRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   SQ ++Q      + TLL+ KV  +EIA++VS+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKKLDLASQAEMQ------EMTLLRHKVTDQEIADVVSKATGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  +VVGQ EA+SAV+NAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEEALHDKVVGQHEAVSAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++ ++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LTKALAQFLFDSPDAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE--MEKG 551
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+N +I+MTSNLGSD I+E   E  
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNAVIIMTSNLGSDLIQEHYREYS 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E +K  +M+ +   FRPEF+NR+D+ +VF  L+ + I  IA IQL  L+ +L + +  
Sbjct: 734 YAE-MKTMLMDVLSRQFRPEFLNRLDESVVFHPLDDRQIKQIAGIQLQRLRQRLQQRDFL 792

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L++S AAL+K++ +GFD +YGAR
Sbjct: 793 LEVSDAALEKLAEVGFDPLYGAR 815


>gi|398801707|ref|ZP_10560945.1| ATP-dependent chaperone ClpB [Pantoea sp. GM01]
 gi|398091391|gb|EJL81836.1| ATP-dependent chaperone ClpB [Pantoea sp. GM01]
          Length = 857

 Score =  780 bits (2014), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/622 (59%), Positives = 498/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKGRRVLALDMGSLVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KGVLSDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQFIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRLQMDSKPESLDRLERRIIQLKLEQQALKKESDDASLK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ E+++ E +YA LE+ WK EK  +  +Q IK E+E+ RL + +A R  D   +S
Sbjct: 440 RLEMLESELDQKEREYAELEEEWKAEKASLTGTQNIKAELEQARLTMEQARRVGDLGQMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLAIATQSE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHARVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGSLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V  +FRPEFINRIDD++VF  L  K+I SIA IQL  L ++L +    L
Sbjct: 734 YPEMKEVVMTVVGQHFRPEFINRIDDMVVFHPLGEKHIASIAQIQLQRLYHRLEERGYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS+AALK +   G+D +YGAR
Sbjct: 794 HISEAALKLLGENGYDPVYGAR 815


>gi|425744089|ref|ZP_18862150.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           WC-323]
 gi|425491890|gb|EKU58167.1| ATP-dependent chaperone protein ClpB [Acinetobacter baumannii
           WC-323]
          Length = 859

 Score =  780 bits (2013), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/623 (59%), Positives = 503/623 (80%), Gaps = 8/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY  HHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D  SK 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++++I + + +Y +LE+IWK EKTL++  ++ + E+++ R  + KA R+ D    +
Sbjct: 437 EVNHLEQQIAEKQKEYNDLEEIWKAEKTLVEGDKKAQVELDQARSALEKAKREGDLAEAA 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ L+   Q ++   N   K  L++TKV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 RLQYGVIPELQKRLE---QAEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMLQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLLN+E  L  RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GEREKLLNMEEFLHNRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-- 551
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS  ++E+ +G  
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGAT 731

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E ++  VM+ V  +FRPEFINRID++++F  L +  I  IA+IQL+ L+ +L + +M 
Sbjct: 732 DDE-VRAVVMSAVTQHFRPEFINRIDELVIFHSLQKAQIRGIADIQLDRLRTRLSERDMG 790

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +   A   + + GFD +YGAR
Sbjct: 791 LTVDDTAFDLLIDAGFDPVYGAR 813


>gi|383817288|ref|ZP_09972664.1| protein disaggregation chaperone [Serratia sp. M24T3]
 gi|383293843|gb|EIC82201.1| protein disaggregation chaperone [Serratia sp. M24T3]
          Length = 857

 Score =  779 bits (2012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/662 (56%), Positives = 513/662 (77%), Gaps = 15/662 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQFIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++++DSKPE +D+L+RR+IQLK+E +A+K+E D++S K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLDRRIIQLKLEQQALKKESDDASIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E +Y+ L++ WK EK  +  +Q IK ++E+ ++ + +A R  D   +S
Sbjct: 440 RLEMLNTELEQKEREYSGLDEEWKAEKASLTGTQNIKADLEQAKITLEQARRVGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLAAATQAE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L KRV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEDDLHKRVIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +FN++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALATFLFNSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++   +  
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDVIQQHFGEAT 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K +VM  V   FRPEFINRID+++VF  L   +I  IA IQL  L  +L +     
Sbjct: 734 YAQMKESVMEVVTNNFRPEFINRIDEVVVFHPLGHAHIKHIAEIQLQRLYKRLEERGYSA 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
            ++ AAL+ + N GFD +YGAR +   K+++   +     ++P A  I  G LI   P +
Sbjct: 794 HLTDAALELLGNTGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGKPIT 845

Query: 673 LD 674
           +D
Sbjct: 846 ID 847


>gi|378765994|ref|YP_005194455.1| ATP-dependent chaperone ClpB [Pantoea ananatis LMG 5342]
 gi|386078251|ref|YP_005991776.1| Chaperone protein clpB [Pantoea ananatis PA13]
 gi|354987432|gb|AER31556.1| Chaperone protein clpB [Pantoea ananatis PA13]
 gi|365185468|emb|CCF08418.1| ATP-dependent chaperone ClpB [Pantoea ananatis LMG 5342]
          Length = 857

 Score =  779 bits (2012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 496/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLSDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEALDRLERRIIQLKLEQQALKKESDDASVK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ E+N+ E +YA LE+ WK EK  +  +Q IK E+E+ RL + +A R  D   +S
Sbjct: 440 RLDMLEAELNQKEREYAELEEEWKAEKASLTGTQNIKAELEQARLTLEQARRSGDLAQMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L   +Q +           LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGKIPALEKQLASATQSE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQDEA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEQELHSRVIGQDEAVEAVSNAIRRSRAGLADPNRPVGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKSLANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     +
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGNLN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V  +FRPEF+NRID+++VF  L  K+I SIA IQL  L  +L      L
Sbjct: 734 YPEMKNLVMGVVGQHFRPEFVNRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEDRGYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS AA+K +   G+D +YGAR
Sbjct: 794 HISDAAIKLLGENGYDPVYGAR 815


>gi|386016866|ref|YP_005935161.1| chaperone ClpB [Pantoea ananatis AJ13355]
 gi|327394943|dbj|BAK12365.1| chaperone ClpB [Pantoea ananatis AJ13355]
          Length = 861

 Score =  779 bits (2012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 496/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 264 KGVLSDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 324 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S K
Sbjct: 384 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEALDRLERRIIQLKLEQQALKKESDDASVK 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ E+N+ E +YA LE+ WK EK  +  +Q IK E+E+ RL + +A R  D   +S
Sbjct: 444 RLDMLEAELNQKEREYAELEEEWKAEKASLTGTQNIKAELEQARLTLEQARRSGDLAQMS 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L   +Q +           LL+ +V   EIA++++R TGIPV+++++
Sbjct: 504 ELQYGKIPALEKQLASATQSE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQDEA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLRMEQELHSRVIGQDEAVEAVSNAIRRSRAGLADPNRPVGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 618 LCKSLANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     +
Sbjct: 678 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGNLN 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V  +FRPEF+NRID+++VF  L  K+I SIA IQL  L  +L      L
Sbjct: 738 YPEMKNLVMGVVGQHFRPEFVNRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEDRGYQL 797

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS AA+K +   G+D +YGAR
Sbjct: 798 HISDAAIKLLGENGYDPVYGAR 819


>gi|291618563|ref|YP_003521305.1| ClpB [Pantoea ananatis LMG 20103]
 gi|291153593|gb|ADD78177.1| ClpB [Pantoea ananatis LMG 20103]
          Length = 861

 Score =  779 bits (2012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 496/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 264 KGVLSDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 324 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S K
Sbjct: 384 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEALDRLERRIIQLKLEQQALKKESDDASVK 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ E+N+ E +YA LE+ WK EK  +  +Q IK E+E+ RL + +A R  D   +S
Sbjct: 444 RLDMLEAELNQKEREYAELEEEWKAEKASLTGTQNIKAELEQARLTLEQARRSGDLAQMS 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L   +Q +           LL+ +V   EIA++++R TGIPV+++++
Sbjct: 504 ELQYGKIPALEKQLASATQSE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMME 557

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQDEA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 558 GERDKLLRMEQELHSRVIGQDEAVEAVSNAIRRSRAGLADPNRPVGSFLFLGPTGVGKTE 617

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 618 LCKSLANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 677

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     +
Sbjct: 678 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGNLN 737

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V  +FRPEF+NRID+++VF  L  K+I SIA IQL  L  +L      L
Sbjct: 738 YPEMKNLVMGVVGQHFRPEFVNRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEDRGYQL 797

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS AA+K +   G+D +YGAR
Sbjct: 798 HISDAAIKLLGENGYDPVYGAR 819


>gi|440286532|ref|YP_007339297.1| ATP-dependent chaperone ClpB [Enterobacteriaceae bacterium strain
           FGI 57]
 gi|440046054|gb|AGB77112.1| ATP-dependent chaperone ClpB [Enterobacteriaceae bacterium strain
           FGI 57]
          Length = 857

 Score =  779 bits (2012), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/622 (59%), Positives = 494/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASLK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+   E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELEDKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ +V   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLAAATQSE------GKTMRLLRNRVTDAEIAEVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQDLHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L   +I SIA IQL  L  +L +   + 
Sbjct: 734 YGHMKDLVLGVVSQSFRPEFINRIDEVVVFHPLGEAHIASIAQIQLQRLYKRLEERGYET 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +IS  AL  +S  G+D +YGAR
Sbjct: 794 QISDEALHLLSKNGYDPVYGAR 815


>gi|294650714|ref|ZP_06728066.1| ATP-dependent chaperone protein ClpB [Acinetobacter haemolyticus
           ATCC 19194]
 gi|292823398|gb|EFF82249.1| ATP-dependent chaperone protein ClpB [Acinetobacter haemolyticus
           ATCC 19194]
          Length = 859

 Score =  779 bits (2011), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/622 (58%), Positives = 504/622 (81%), Gaps = 6/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY  HHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D+ SK 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDQDDGSKA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++++I + + +Y +LE+IWK EKTL++  ++ + E+++ R+ + KA R+ D    +
Sbjct: 437 EVNHLEQQIAEKQKEYNDLEEIWKAEKTLVEGDKKAQVELDQARVALEKAKREGDLAEAA 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ L+   Q +I   N   K  L++TKV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 RLQYGVIPELQKRLE---QAEIAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMLQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E+ L  RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GEREKLLHMESFLHNRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGD 552
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS  ++E+ E   
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGETAT 731

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + ++  VM+ V  +FRPEFINRID++++F  L +  I  IA+IQL+ L+++L + +M L
Sbjct: 732 DDEVRAVVMSAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLAERDMRL 791

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +   A   + + GFD +YGAR
Sbjct: 792 TVDDTAFDLLIDAGFDPVYGAR 813


>gi|226953127|ref|ZP_03823591.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Acinetobacter sp. ATCC 27244]
 gi|226836125|gb|EEH68508.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Acinetobacter sp. ATCC 27244]
          Length = 859

 Score =  779 bits (2011), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/622 (58%), Positives = 504/622 (81%), Gaps = 6/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY  HHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D+ SK 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDQDDGSKA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++++I + + +Y +LE+IWK EKTL++  ++ + E+++ R+ + KA R+ D    +
Sbjct: 437 EVNHLEQQIAEKQKEYNDLEEIWKAEKTLVEGDKKAQVELDQARVALEKAKREGDLAEAA 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ L+   Q +I   N   K  L++TKV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 RLQYGVIPELQKRLE---QAEIAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMLQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E+ L  RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GEREKLLHMESFLHNRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-EKGD 552
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS  ++E+ E   
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGETAT 731

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + ++  VM+ V  +FRPEFINRID++++F  L +  I  IA+IQL+ L+++L + +M L
Sbjct: 732 DDEVRAVVMSAVSQHFRPEFINRIDELVIFHSLKKAQIRGIADIQLDRLRSRLAERDMRL 791

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +   A   + + GFD +YGAR
Sbjct: 792 TVDDTAFDLLIDAGFDPVYGAR 813


>gi|254362598|ref|ZP_04978693.1| endopeptidase ClpA [Mannheimia haemolytica PHL213]
 gi|452744796|ref|ZP_21944637.1| ATP-dependent Clp protease subunit B [Mannheimia haemolytica
           serotype 6 str. H23]
 gi|153094206|gb|EDN75089.1| endopeptidase ClpA [Mannheimia haemolytica PHL213]
 gi|452087214|gb|EME03596.1| ATP-dependent Clp protease subunit B [Mannheimia haemolytica
           serotype 6 str. H23]
          Length = 855

 Score =  778 bits (2010), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/623 (59%), Positives = 506/623 (81%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 258 KAVLNDLAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 318 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++
Sbjct: 378 YVSDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+   E +Y+ LE+IWK EK+ +  +Q IK E+E  R+ +++A R++D++ +S
Sbjct: 438 RLAKLDEEMAAKEREYSELEEIWKAEKSALLGTQHIKSELENARIAMDQARRENDFEKMS 497

Query: 314 KLKYGELNKLERILK--EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +L+YG +  LE+ L+  E  +K      NA+   LL+TKV  EEIAE++S+ TGIPV+K+
Sbjct: 498 ELQYGVIPNLEKQLQAVENGEK------NADA-QLLRTKVTEEEIAEVLSKATGIPVAKM 550

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           ++ E+EKLL +E +L  RV+GQ+EA+ AV+NAIRRSR+GLSD  +P GSF+FLGPTGVGK
Sbjct: 551 MEGEKEKLLRMEEVLHARVIGQNEAVDAVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGK 610

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TEL KTL+  +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR PY
Sbjct: 611 TELSKTLANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRHPY 670

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           S++LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+E    
Sbjct: 671 SVVLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIRENAYK 730

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             +++K  VM  V  +FRPEFINRID+ ++F  L +++I SIA IQL  L  +L +   +
Sbjct: 731 GYDVVKEMVMEVVGQHFRPEFINRIDETVMFHSLGQEHIRSIAKIQLQRLIQRLAERGYE 790

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           + ++ AAL  I   GFD ++GAR
Sbjct: 791 VTVTDAALDHIGKAGFDPLFGAR 813


>gi|312881919|ref|ZP_07741682.1| clpB protein [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309370437|gb|EFP97926.1| clpB protein [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 858

 Score =  778 bits (2010), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/622 (59%), Positives = 495/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRI+N EVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIVNDEVPEGLRRRRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  + ++I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLSELSKEEGNVILFIDEIHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK++V+EP +E+T++ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVIVDEPTVEDTVAILRGLKERYELHHHVEITDPAIVAAASLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++++DSKPE +DKLER++IQLKIE +A+  E+D +S+K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRLQMDSKPESLDKLERKIIQLKIEQQALTNEHDGASEK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL+ + +E+   E  ++ LE++WK EK  +  +Q IK E+E+ R+ +  A R  D   +S
Sbjct: 440 RLINLNQELVDKERAFSELEEVWKAEKAALSGTQHIKTELEQARMDMEFARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L   +Q ++Q      + TLLK KV   EIA+++S+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELERQLDLAAQAEMQ------EMTLLKNKVSDNEIADVLSKQTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+ KLL +E +L  RV+GQ EA+  V+NAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 AEKVKLLRMEEVLHDRVIGQSEAVEVVANAIRRSRAGLSDPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++E +++RIDMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKTLANFLFDSETAMVRIDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS +I+E     +
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSSRIQEGFATTN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  VM  V  +FRPEFINR+D+ +VF  L++ +I +IA IQL  L  ++      L
Sbjct: 734 YQQMKEKVMEVVGKHFRPEFINRVDESVVFHPLSQDDIKAIALIQLAKLSERMKDNGYVL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
           +IS+ A   I+ +GFD IYGAR
Sbjct: 794 EISEQASDLIAQVGFDPIYGAR 815


>gi|212712900|ref|ZP_03321028.1| hypothetical protein PROVALCAL_03997 [Providencia alcalifaciens DSM
           30120]
 gi|422019412|ref|ZP_16365960.1| protein disaggregation chaperone [Providencia alcalifaciens Dmel2]
 gi|212684445|gb|EEB43973.1| hypothetical protein PROVALCAL_03997 [Providencia alcalifaciens DSM
           30120]
 gi|414103251|gb|EKT64829.1| protein disaggregation chaperone [Providencia alcalifaciens Dmel2]
          Length = 857

 Score =  778 bits (2010), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/663 (58%), Positives = 518/663 (78%), Gaps = 17/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKK
Sbjct: 380 YITDRMLPDKAIDLIDEAGASLRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++++E+ + E +Y+ LE+ WK EK  +  +Q IK E+E  R+++ KA R  D   +S
Sbjct: 440 RLEMLEEELAEKEREYSALEEEWKAEKASLTGTQHIKAELENTRIEMEKARRNGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L+  ++ +           LL+ KV   EIAEI++R TGIPVS++++
Sbjct: 500 ELQYGRIPELEKQLEAATKAE------GKSMKLLRNKVTDVEIAEILARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQQLHQRVIGQDEAVVAVSNAIRRSRAGLSDPNRPIGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--G 551
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E     G
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQERFGMIG 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E +K  VM  V   FRPEFINRID+++VF  L ++ I +IANIQL  L  +L +   +
Sbjct: 734 YSE-MKDMVMEVVAHNFRPEFINRIDEVVVFHPLGKEQITNIANIQLARLYKRLEEHGYE 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           +  + AAL+KI   GFD I+GAR +   K+++   +     ++P A  I  G LI   P 
Sbjct: 793 VTATAAALEKIGEAGFDPIFGARPL---KRAIQQEI-----ENPLAQEILSGKLIPGKPI 844

Query: 672 SLD 674
           +LD
Sbjct: 845 TLD 847


>gi|218930300|ref|YP_002348175.1| protein disaggregation chaperone [Yersinia pestis CO92]
 gi|54035780|sp|Q74X11.2|CLPB_YERPE RecName: Full=Chaperone protein ClpB
 gi|115348911|emb|CAL21868.1| Clp ATPase [Yersinia pestis CO92]
          Length = 857

 Score =  778 bits (2010), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/662 (57%), Positives = 516/662 (77%), Gaps = 15/662 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGSLIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ + +A R  D   +S
Sbjct: 440 RLEMLNTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +  +           LL+ +V   E+AE+++R TGIPVS++++
Sbjct: 500 ELQYGTIPELEKQLAAATALE------GKTMKLLRNRVTEIEVAEVLARWTGIPVSRMLK 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + +
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM+ V  +FRPEFINRID+++VF  L R ++ SIANIQL  L  +L +   ++
Sbjct: 734 YSEMKTVVMDVVSHHFRPEFINRIDEVVVFHPLGRAHLASIANIQLERLYKRLEERGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
           KI++ AL+ +   GFD +YGAR +   K+++   +     ++P A  I  G LI   P +
Sbjct: 794 KITQPALEFLGEAGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGIPVT 845

Query: 673 LD 674
           LD
Sbjct: 846 LD 847


>gi|51595198|ref|YP_069389.1| protein disaggregation chaperone [Yersinia pseudotuberculosis IP
           32953]
 gi|108808757|ref|YP_652673.1| protein disaggregation chaperone [Yersinia pestis Antiqua]
 gi|108810986|ref|YP_646753.1| protein disaggregation chaperone [Yersinia pestis Nepal516]
 gi|145600170|ref|YP_001164246.1| protein disaggregation chaperone [Yersinia pestis Pestoides F]
 gi|153947726|ref|YP_001402169.1| protein disaggregation chaperone [Yersinia pseudotuberculosis IP
           31758]
 gi|153997675|ref|ZP_02022775.1| Clp ATPase [Yersinia pestis CA88-4125]
 gi|162419640|ref|YP_001607805.1| protein disaggregation chaperone [Yersinia pestis Angola]
 gi|165926588|ref|ZP_02222420.1| chaperone ClpB [Yersinia pestis biovar Orientalis str. F1991016]
 gi|166009977|ref|ZP_02230875.1| chaperone ClpB [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166213111|ref|ZP_02239146.1| chaperone ClpB [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167399363|ref|ZP_02304887.1| chaperone ClpB [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167421665|ref|ZP_02313418.1| chaperone ClpB [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167423529|ref|ZP_02315282.1| chaperone ClpB [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|167470275|ref|ZP_02334979.1| protein disaggregation chaperone [Yersinia pestis FV-1]
 gi|170025564|ref|YP_001722069.1| protein disaggregation chaperone [Yersinia pseudotuberculosis
           YPIII]
 gi|186894216|ref|YP_001871328.1| protein disaggregation chaperone [Yersinia pseudotuberculosis
           PB1/+]
 gi|229838891|ref|ZP_04459050.1| Clp ATPase [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229896559|ref|ZP_04511726.1| Clp ATPase [Yersinia pestis Pestoides A]
 gi|229899458|ref|ZP_04514601.1| Clp ATPase [Yersinia pestis biovar Orientalis str. India 195]
 gi|229901202|ref|ZP_04516325.1| Clp ATPase [Yersinia pestis Nepal516]
 gi|270489387|ref|ZP_06206461.1| ATP-dependent chaperone protein ClpB [Yersinia pestis KIM D27]
 gi|294504989|ref|YP_003569051.1| Clp ATPase [Yersinia pestis Z176003]
 gi|384127314|ref|YP_005509928.1| Clp ATPase [Yersinia pestis D182038]
 gi|384138885|ref|YP_005521587.1| protein disaggregation chaperone [Yersinia pestis A1122]
 gi|384415963|ref|YP_005625325.1| Clp ATPase [Yersinia pestis biovar Medievalis str. Harbin 35]
 gi|420548363|ref|ZP_15046177.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-01]
 gi|420553708|ref|ZP_15050949.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-02]
 gi|420559314|ref|ZP_15055821.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-03]
 gi|420564702|ref|ZP_15060658.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-04]
 gi|420569749|ref|ZP_15065242.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-05]
 gi|420575407|ref|ZP_15070361.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-06]
 gi|420580714|ref|ZP_15075187.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-07]
 gi|420586076|ref|ZP_15080044.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-08]
 gi|420591186|ref|ZP_15084638.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-09]
 gi|420596572|ref|ZP_15089481.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-10]
 gi|420607664|ref|ZP_15099430.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-12]
 gi|420613051|ref|ZP_15104260.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-13]
 gi|420618438|ref|ZP_15108953.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-14]
 gi|420623734|ref|ZP_15113729.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-15]
 gi|420628814|ref|ZP_15118338.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-16]
 gi|420633939|ref|ZP_15122930.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-19]
 gi|420639152|ref|ZP_15127623.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-25]
 gi|420644612|ref|ZP_15132606.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-29]
 gi|420649905|ref|ZP_15137388.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-32]
 gi|420655541|ref|ZP_15142452.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-34]
 gi|420661053|ref|ZP_15147383.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-36]
 gi|420666330|ref|ZP_15152136.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-42]
 gi|420671193|ref|ZP_15156570.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-45]
 gi|420676540|ref|ZP_15161430.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-46]
 gi|420682170|ref|ZP_15166514.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-47]
 gi|420687501|ref|ZP_15171252.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-48]
 gi|420692731|ref|ZP_15175841.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-52]
 gi|420698491|ref|ZP_15180908.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-53]
 gi|420704343|ref|ZP_15185556.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-54]
 gi|420709667|ref|ZP_15190294.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-55]
 gi|420715143|ref|ZP_15195157.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-56]
 gi|420720653|ref|ZP_15199880.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-58]
 gi|420726119|ref|ZP_15204693.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-59]
 gi|420731705|ref|ZP_15209713.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-60]
 gi|420736721|ref|ZP_15214245.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-61]
 gi|420742197|ref|ZP_15219166.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-63]
 gi|420753353|ref|ZP_15228856.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-65]
 gi|420759153|ref|ZP_15233516.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-66]
 gi|420764404|ref|ZP_15238135.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-71]
 gi|420769637|ref|ZP_15242829.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-72]
 gi|420774617|ref|ZP_15247339.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-76]
 gi|420780234|ref|ZP_15252283.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-88]
 gi|420785835|ref|ZP_15257175.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-89]
 gi|420790971|ref|ZP_15261792.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-90]
 gi|420796494|ref|ZP_15266757.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-91]
 gi|420801561|ref|ZP_15271310.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-92]
 gi|420806908|ref|ZP_15276153.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-93]
 gi|420817777|ref|ZP_15285946.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-95]
 gi|420823093|ref|ZP_15290713.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-96]
 gi|420828176|ref|ZP_15295282.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-98]
 gi|420833864|ref|ZP_15300421.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-99]
 gi|420838725|ref|ZP_15304812.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-100]
 gi|420843920|ref|ZP_15309529.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-101]
 gi|420849585|ref|ZP_15314612.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-102]
 gi|420855254|ref|ZP_15319408.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-103]
 gi|420860444|ref|ZP_15323983.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-113]
 gi|421764775|ref|ZP_16201563.1| protein disaggregation chaperone [Yersinia pestis INS]
 gi|51588480|emb|CAH20088.1| ATP-dependent protease, Hsp 100, part of novel multi-chaperone
           system with DnaK, DnaJ, and GrpE [Yersinia
           pseudotuberculosis IP 32953]
 gi|108774634|gb|ABG17153.1| Clp ATPase [Yersinia pestis Nepal516]
 gi|108780670|gb|ABG14728.1| Clp ATPase [Yersinia pestis Antiqua]
 gi|145211866|gb|ABP41273.1| Clp ATPase [Yersinia pestis Pestoides F]
 gi|149289312|gb|EDM39392.1| Clp ATPase [Yersinia pestis CA88-4125]
 gi|152959221|gb|ABS46682.1| chaperone ClpB [Yersinia pseudotuberculosis IP 31758]
 gi|162352455|gb|ABX86403.1| chaperone ClpB [Yersinia pestis Angola]
 gi|165921516|gb|EDR38713.1| chaperone ClpB [Yersinia pestis biovar Orientalis str. F1991016]
 gi|165990884|gb|EDR43185.1| chaperone ClpB [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166205898|gb|EDR50378.1| chaperone ClpB [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166960584|gb|EDR56605.1| chaperone ClpB [Yersinia pestis biovar Orientalis str. MG05-1020]
 gi|167051867|gb|EDR63275.1| chaperone ClpB [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167057699|gb|EDR67445.1| chaperone ClpB [Yersinia pestis biovar Mediaevalis str. K1973002]
 gi|169752098|gb|ACA69616.1| ATP-dependent chaperone ClpB [Yersinia pseudotuberculosis YPIII]
 gi|186697242|gb|ACC87871.1| ATP-dependent chaperone ClpB [Yersinia pseudotuberculosis PB1/+]
 gi|229681927|gb|EEO78020.1| Clp ATPase [Yersinia pestis Nepal516]
 gi|229687860|gb|EEO79933.1| Clp ATPase [Yersinia pestis biovar Orientalis str. India 195]
 gi|229695257|gb|EEO85304.1| Clp ATPase [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229700337|gb|EEO88369.1| Clp ATPase [Yersinia pestis Pestoides A]
 gi|262366978|gb|ACY63535.1| Clp ATPase [Yersinia pestis D182038]
 gi|270337891|gb|EFA48668.1| ATP-dependent chaperone protein ClpB [Yersinia pestis KIM D27]
 gi|294355448|gb|ADE65789.1| Clp ATPase [Yersinia pestis Z176003]
 gi|320016467|gb|ADW00039.1| Clp ATPase [Yersinia pestis biovar Medievalis str. Harbin 35]
 gi|342854014|gb|AEL72567.1| protein disaggregation chaperone [Yersinia pestis A1122]
 gi|391423090|gb|EIQ85605.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-01]
 gi|391423345|gb|EIQ85839.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-02]
 gi|391423480|gb|EIQ85958.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-03]
 gi|391438151|gb|EIQ98939.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-04]
 gi|391439203|gb|EIQ99882.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-05]
 gi|391443012|gb|EIR03370.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-06]
 gi|391454927|gb|EIR14087.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-07]
 gi|391455840|gb|EIR14924.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-08]
 gi|391457773|gb|EIR16690.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-09]
 gi|391470814|gb|EIR28445.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-10]
 gi|391473165|gb|EIR30566.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-12]
 gi|391486889|gb|EIR42879.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-13]
 gi|391488482|gb|EIR44325.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-15]
 gi|391488509|gb|EIR44344.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-14]
 gi|391502865|gb|EIR57119.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-16]
 gi|391503067|gb|EIR57296.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-19]
 gi|391508126|gb|EIR61897.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-25]
 gi|391518865|gb|EIR71549.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-29]
 gi|391520255|gb|EIR72819.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-34]
 gi|391521247|gb|EIR73729.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-32]
 gi|391533240|gb|EIR84536.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-36]
 gi|391536320|gb|EIR87315.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-42]
 gi|391538825|gb|EIR89599.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-45]
 gi|391551799|gb|EIS01281.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-46]
 gi|391551880|gb|EIS01352.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-47]
 gi|391552363|gb|EIS01793.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-48]
 gi|391566625|gb|EIS14594.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-52]
 gi|391567817|gb|EIS15635.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-53]
 gi|391572166|gb|EIS19427.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-54]
 gi|391581134|gb|EIS27050.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-55]
 gi|391583185|gb|EIS28870.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-56]
 gi|391593775|gb|EIS38035.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-58]
 gi|391596756|gb|EIS40654.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-60]
 gi|391597876|gb|EIS41656.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-59]
 gi|391611119|gb|EIS53327.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-61]
 gi|391611657|gb|EIS53811.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-63]
 gi|391624356|gb|EIS65004.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-65]
 gi|391628755|gb|EIS68776.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-66]
 gi|391635025|gb|EIS74231.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-71]
 gi|391637031|gb|EIS75996.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-72]
 gi|391647158|gb|EIS84820.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-76]
 gi|391650621|gb|EIS87885.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-88]
 gi|391655003|gb|EIS91787.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-89]
 gi|391659979|gb|EIS96191.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-90]
 gi|391667560|gb|EIT02880.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-91]
 gi|391677021|gb|EIT11368.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-93]
 gi|391677724|gb|EIT12005.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-92]
 gi|391691050|gb|EIT24012.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-95]
 gi|391694003|gb|EIT26705.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-96]
 gi|391695490|gb|EIT28056.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-98]
 gi|391707961|gb|EIT39259.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-99]
 gi|391711122|gb|EIT42111.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-100]
 gi|391712084|gb|EIT42995.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-101]
 gi|391723962|gb|EIT53588.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-102]
 gi|391724696|gb|EIT54249.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-103]
 gi|391727374|gb|EIT56603.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-113]
 gi|411174326|gb|EKS44359.1| protein disaggregation chaperone [Yersinia pestis INS]
          Length = 857

 Score =  778 bits (2010), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/662 (57%), Positives = 516/662 (77%), Gaps = 15/662 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGSLIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ + +A R  D   +S
Sbjct: 440 RLEMLNTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +  +           LL+ +V   E+AE+++R TGIPVS++++
Sbjct: 500 ELQYGTIPELEKQLAAATALE------GKTMKLLRNRVTEIEVAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + +
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM+ V  +FRPEFINRID+++VF  L R ++ SIANIQL  L  +L +   ++
Sbjct: 734 YSEMKTVVMDVVSHHFRPEFINRIDEVVVFHPLGRAHLASIANIQLERLYKRLEERGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
           KI++ AL+ +   GFD +YGAR +   K+++   +     ++P A  I  G LI   P +
Sbjct: 794 KITQPALEFLGEAGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGIPVT 845

Query: 673 LD 674
           LD
Sbjct: 846 LD 847


>gi|22124822|ref|NP_668245.1| protein disaggregation chaperone [Yersinia pestis KIM10+]
 gi|45440507|ref|NP_992046.1| protein disaggregation chaperone [Yersinia pestis biovar Microtus
           str. 91001]
 gi|21957649|gb|AAM84496.1|AE013694_1 heat shock protein [Yersinia pestis KIM10+]
 gi|45435364|gb|AAS60923.1| Clp ATPase [Yersinia pestis biovar Microtus str. 91001]
          Length = 864

 Score =  778 bits (2009), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/662 (57%), Positives = 518/662 (78%), Gaps = 15/662 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 207 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGSLIAGAKYRGEFEERL 266

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 267 KGVLNDLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEY 326

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 327 RQYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 386

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKK
Sbjct: 387 YISDRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKK 446

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ + +A R  D   +S
Sbjct: 447 RLEMLNTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMS 506

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +  +           LL+ +V   E+AE+++R TGIPVS++++
Sbjct: 507 ELQYGTIPELEKQLAAATALE------GKTMKLLRNRVTEIEVAEVLARWTGIPVSRMLE 560

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 561 SERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 620

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 621 LCKALATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 680

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + +
Sbjct: 681 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMN 740

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM+ V  +FRPEFINRID+++VF  L R ++ SIANIQL  L  +L +   ++
Sbjct: 741 YSEMKTVVMDVVSHHFRPEFINRIDEVVVFHPLGRAHLASIANIQLERLYKRLEERGYEV 800

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
           KI++ AL+ +   GFD +YGAR +   K+++    ++I  ++P A  I  G LI   P +
Sbjct: 801 KITQPALEFLGEAGFDPVYGARPL---KRAIQ---QEI--ENPLAQQILSGKLIPGIPVT 852

Query: 673 LD 674
           LD
Sbjct: 853 LD 854


>gi|406037410|ref|ZP_11044774.1| clpB [Acinetobacter parvus DSM 16617 = CIP 108168]
          Length = 859

 Score =  778 bits (2009), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/623 (59%), Positives = 503/623 (80%), Gaps = 8/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY  HHGV+I D AI+ A+++S+R
Sbjct: 317 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYATHHGVQILDSAIIGAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+EIDSKPE +DKL+RRLIQLK++ EA+K++ D  SK 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDKLDRRLIQLKMQLEAVKKDEDAGSKA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++++I + + +Y +LE+IWK EKTL++  ++ + E+++ R+ + KA R+ D    +
Sbjct: 437 EVNHLEQQIAEKQKEYNDLEEIWKAEKTLVEGDKKAQIELDQARVALEKAKREGDLAEAA 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ L+   Q ++   N   K  L++TKV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 RLQYGVIPELQKRLE---QAEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVTKMLQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L KRVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GEREKLLQMEEFLHKRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-- 551
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS  ++E+ +G  
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSQDVRELGEGAT 731

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E I+  VMN V  +FRPEFINRID++++F  L +  I +IA+IQL  L+++L + ++ 
Sbjct: 732 DDE-IRAVVMNAVSQHFRPEFINRIDEVVIFHPLQKDQIRAIADIQLERLRSRLNERDIG 790

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +   A   +   GFD +YGAR
Sbjct: 791 LTVDDTAFDLLIEAGFDPVYGAR 813


>gi|71281252|ref|YP_270571.1| ATP-dependent chaperone protein ClpB [Colwellia psychrerythraea
           34H]
 gi|71146992|gb|AAZ27465.1| ATP-dependent chaperone protein ClpB [Colwellia psychrerythraea
           34H]
          Length = 861

 Score =  778 bits (2009), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/623 (58%), Positives = 504/623 (80%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIG+PGVGKTAIVEGLAQRI+N EVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGQPGVGKTAIVEGLAQRIVNNEVPEGLKNKRVLSLDMGSLVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGQVILFIDELHTMVGAGKSDGAMDAGNMLKPALARGDLHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LVEEP +E+TI+ILRGL+++YE+HH V ITDPAIVAA+ LS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVEEPSVEDTIAILRGLKERYELHHSVNITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++++DSKPE +D+LERRLIQLK+E  A++++ DE++ K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRLQMDSKPEDLDRLERRLIQLKLEQRALEKDEDEATIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +I ++I++ + KY  L+++W  EK  +  +  IKEE+E+ R+++  A R  D   +S
Sbjct: 440 RLAIISQQISEKQKKYDELDEVWTTEKAALYGAHTIKEELEQARIELEAARRTGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE+ L   SQ ++Q      + TLL  KV   EIA+++SR TGIPV+K+++
Sbjct: 500 ELQYGKLPELEKQLDLASQAEMQ------EMTLLANKVTEVEIADVLSRATGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL++E+ L + V+GQ EA+++VSNAIRRSR+GLSD  +P GSF+FLGPTGVGKTE
Sbjct: 554 QERDKLLHMEDNLHQNVIGQHEAVTSVSNAIRRSRAGLSDPNQPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IR+DMSEF+EKHS++RL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LTKALAEFLFDSQDALIRVDMSEFMEKHSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSN+GSD I+E+  G+ 
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNIGSDIIQEL-AGES 732

Query: 554 EI--IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           +   +K  VMN +  +F+PEFINR+D+ +VF  L  + I  IA IQ+  L ++L++  ++
Sbjct: 733 QYHQMKEEVMNTLGQHFKPEFINRVDESVVFHPLVAEQIKKIAKIQIEALADRLIEQELN 792

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L I++ AL  IS  GFD I+GAR
Sbjct: 793 LTINEEALSLISAAGFDPIFGAR 815


>gi|254785223|ref|YP_003072651.1| ATP-dependent chaperone ClpB [Teredinibacter turnerae T7901]
 gi|237683583|gb|ACR10847.1| ATP-dependent chaperone ClpB [Teredinibacter turnerae T7901]
          Length = 879

 Score =  778 bits (2009), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/643 (58%), Positives = 504/643 (78%), Gaps = 28/643 (4%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI++GEVP  L ++++L LD+  LLAG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVDGEVPEGLKNRRLLSLDLGALLAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+   +  +++FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLNELGKQEGRVVLFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK++V+EP+ E+TI+ILRGL+++YE+HHGV I+D AI+AA++LS R
Sbjct: 320 RQYIEKDAALERRFQKVVVDEPNEEDTIAILRGLKERYELHHGVNISDSAIIAAAKLSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEA ++I++EIDSKPE MD+LERRLIQLKIE EA+K++ D +++K
Sbjct: 380 YITDRQLPDKAIDLIDEAGSRIRMEIDSKPEQMDRLERRLIQLKIEREAVKKDDDTAARK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI+ +I++ E  YA+L++IW+ EK  ++ SQQIK  +E+ RL +  A R  D   +S
Sbjct: 440 RLDLIESQIDEAERAYADLDEIWRAEKVSLQGSQQIKSNLEQARLDLEAARRAGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   SQ ++      ++  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGIIPELEKQLDMASQAEM------HEMKLLRNKVTDEEIAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E +L +RV+GQ EA+ AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEEVLHERVIGQSEAVIAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYSL
Sbjct: 614 LCKALAEFLFDSQDAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSL 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+L+DGRLTD +GRT++FRNT++VMTSNLGS  I+++ +   
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFRNTVVVMTSNLGSAAIQDIAQNRA 733

Query: 554 ----------------------EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNIL 591
                                   +K AVM  V  +FRPEFINRID+++VF  L +  I 
Sbjct: 734 YDSINFDESSSQDDSMQNEHKYAAMKDAVMEVVAGHFRPEFINRIDEVVVFHPLGKPQIR 793

Query: 592 SIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 634
            IA+IQL IL+ +L +  + L +S   + KI+  GFD +YGAR
Sbjct: 794 GIADIQLGILRKRLHERELKLDMSNEVMDKIAEAGFDPVYGAR 836


>gi|293392742|ref|ZP_06637060.1| chaperone protein ClpB [Serratia odorifera DSM 4582]
 gi|291424601|gb|EFE97812.1| chaperone protein ClpB [Serratia odorifera DSM 4582]
          Length = 857

 Score =  778 bits (2009), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/661 (56%), Positives = 514/661 (77%), Gaps = 15/661 (2%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG KYRGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L +++  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 261 GVLSDLAKQEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           QYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RY
Sbjct: 321 QYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           +SDR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+ +E D++S+KR
Sbjct: 381 VSDRQLPDKAIDLIDEAASSIRMQMDSKPEALDRLERRVIQLKLEQQALNKESDDASRKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L ++  E+ + E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ + +A R  D   +S+
Sbjct: 441 LEMLSSELEQKEREYSELEEEWKAEKASLSGTQNIKAELEQAKITLEQARRVGDLGRMSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG++ +LE+ L   +Q +           LL+ +V   EIAE++++ TGIPV+++++ 
Sbjct: 501 LQYGKIPELEKQLAAATQAE------GKTMKLLRNRVTDAEIAEVLAKATGIPVARMLEG 554

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           ER+KLL +E  L  RV+GQDEA++AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTEL
Sbjct: 555 ERDKLLRLEQELHSRVIGQDEAVTAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTEL 614

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L++ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+I
Sbjct: 615 CKALASFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVI 674

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDK 553
           LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + + 
Sbjct: 675 LLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNY 734

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K +VM  V  +FRPEFINRID+++VF  L +++I  IA IQL  L  +L +    + 
Sbjct: 735 AQMKESVMEMVSHHFRPEFINRIDEVVVFHPLGQQHIAEIAKIQLARLYQRLEERGYAVT 794

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
           I++ AL  +   G+D +YGAR +   K+++   +     ++P A  I  G L+   P +L
Sbjct: 795 ITEPALTLLGKTGYDPVYGARPL---KRAIQQEI-----ENPLAQQILSGALVPGKPVTL 846

Query: 674 D 674
           D
Sbjct: 847 D 847


>gi|157369131|ref|YP_001477120.1| protein disaggregation chaperone [Serratia proteamaculans 568]
 gi|157320895|gb|ABV39992.1| ATPase AAA-2 domain protein [Serratia proteamaculans 568]
          Length = 857

 Score =  778 bits (2008), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/621 (59%), Positives = 497/621 (80%), Gaps = 7/621 (1%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  L+AG KYRGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L ++S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 261 AVLSDLSKQEGSVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           QYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RY
Sbjct: 321 QYIEKDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           ISDR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKKR
Sbjct: 381 ISDRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALSKESDDASKKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L ++  E+ + E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ + +A R  D   +S+
Sbjct: 441 LEMLSGELEQKEREYSELEEEWKAEKASLSGTQNIKAELEQAKITLEQARRVGDLGRMSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG++ +LE+ L   +  +           LL+ +V   EIAE+++R TGIPV+++++ 
Sbjct: 501 LQYGKIPELEKQLAAATLAE------GKTMKLLRNRVTDAEIAEVLARATGIPVARMLEG 554

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           ER+KLL +E  L  RV+GQDEA+SAVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTEL
Sbjct: 555 ERDKLLRLEQELHSRVIGQDEAVSAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTEL 614

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L++ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+I
Sbjct: 615 CKALASFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVI 674

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDK 553
           LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + + 
Sbjct: 675 LLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMNY 734

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
             +K +VM  V  +FRPEFINRID+++VF  L +K+I  IA IQL  L  +L +   ++ 
Sbjct: 735 AQMKESVMEMVTHHFRPEFINRIDEVVVFHPLGQKHIAEIAKIQLARLYKRLEERGYEVT 794

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +++ AL+ +   GFD +YGAR
Sbjct: 795 MTEPALELLGKTGFDPVYGAR 815


>gi|123441247|ref|YP_001005234.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|420257395|ref|ZP_14760155.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
           enterocolitica WA-314]
 gi|122088208|emb|CAL10996.1| Clp ATPase [Yersinia enterocolitica subsp. enterocolitica 8081]
 gi|404515185|gb|EKA28960.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
           enterocolitica WA-314]
          Length = 857

 Score =  778 bits (2008), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/663 (57%), Positives = 515/663 (77%), Gaps = 17/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ + +A R  D   +S
Sbjct: 440 RLEMLNTELEQKEREYSELEEEWKAEKAALTGTQNIKTELEQAKISLEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +  +           LL+ +V   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATALE------GKTMKLLRNRVTEAEIAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L KRV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEQDLHKRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   E+ 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERS 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E +K  VM  V  +FRPEFINRID+++VF  L R ++ SIA+IQL  L  +L +    
Sbjct: 734 YSE-MKEMVMEVVTHHFRPEFINRIDEVVVFHPLGRAHLASIASIQLERLYKRLEERGYQ 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           + I++ AL+ +   GFD +YGAR +   K+++   +     ++P A  I  G LI   P 
Sbjct: 793 VTITQPALEFLGETGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGVPV 844

Query: 672 SLD 674
           +LD
Sbjct: 845 TLD 847


>gi|386309637|ref|YP_006005693.1| clpb protein [Yersinia enterocolitica subsp. palearctica Y11]
 gi|418243771|ref|ZP_12870225.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
           palearctica PhRBD_Ye1]
 gi|433551271|ref|ZP_20507314.1| ClpB protein [Yersinia enterocolitica IP 10393]
 gi|318604489|emb|CBY25987.1| clpb protein [Yersinia enterocolitica subsp. palearctica Y11]
 gi|330863598|emb|CBX73708.1| chaperone protein clpB [Yersinia enterocolitica W22703]
 gi|351776724|gb|EHB19022.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
           palearctica PhRBD_Ye1]
 gi|431788370|emb|CCO70354.1| ClpB protein [Yersinia enterocolitica IP 10393]
          Length = 857

 Score =  778 bits (2008), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/663 (57%), Positives = 515/663 (77%), Gaps = 17/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ + +A R  D   +S
Sbjct: 440 RLEMLNTELEQKEREYSELEEEWKAEKAALTGTQNIKTELEQAKISLEQARRVGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +  +           LL+ +V   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATALE------GKTMKLLRNRVTEAEIAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L KRV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEQDLHKRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   E+ 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERS 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E +K  VM  V  +FRPEFINRID+++VF  L R ++ SIA+IQL  L  +L +    
Sbjct: 734 YSE-MKEMVMEVVTHHFRPEFINRIDEVVVFHPLGRAHLASIASIQLERLYKRLEERGYQ 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           + I++ AL+ +   GFD +YGAR +   K+++   +     ++P A  I  G LI   P 
Sbjct: 793 VTITQPALEFLGETGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGVPV 844

Query: 672 SLD 674
           +LD
Sbjct: 845 TLD 847


>gi|384123457|ref|YP_005506077.1| Clp ATPase [Yersinia pestis D106004]
 gi|262363053|gb|ACY59774.1| Clp ATPase [Yersinia pestis D106004]
          Length = 733

 Score =  778 bits (2008), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/662 (57%), Positives = 516/662 (77%), Gaps = 15/662 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 76  NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGSLIAGAKYRGEFEERL 135

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 136 KGVLNDLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEY 195

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 196 RQYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 255

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKK
Sbjct: 256 YISDRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKK 315

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ + +A R  D   +S
Sbjct: 316 RLEMLNTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMS 375

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +  +           LL+ +V   E+AE+++R TGIPVS++++
Sbjct: 376 ELQYGTIPELEKQLAAATALE------GKTMKLLRNRVTEIEVAEVLARWTGIPVSRMLE 429

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 430 SERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 489

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 490 LCKALATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 549

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + +
Sbjct: 550 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMN 609

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM+ V  +FRPEFINRID+++VF  L R ++ SIANIQL  L  +L +   ++
Sbjct: 610 YSEMKTVVMDVVSHHFRPEFINRIDEVVVFHPLGRAHLASIANIQLERLYKRLEERGYEV 669

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
           KI++ AL+ +   GFD +YGAR +   K+++   +     ++P A  I  G LI   P +
Sbjct: 670 KITQPALEFLGEAGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGIPVT 721

Query: 673 LD 674
           LD
Sbjct: 722 LD 723


>gi|332160283|ref|YP_004296860.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325664513|gb|ADZ41157.1| protein disaggregation chaperone [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 857

 Score =  778 bits (2008), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/663 (57%), Positives = 515/663 (77%), Gaps = 17/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ + +A R  D   +S
Sbjct: 440 RLEMLNTELEQKEREYSELEEEWKAEKAALTGTQNIKTELEQAKISLEQARRVGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +  +           LL+ +V   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATALE------GKTMKLLRNRVTEAEIAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L KRV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEQDLHKRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   E+ 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERS 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E +K  VM  V  +FRPEFINRID+++VF  L R ++ SIA+IQL  L  +L +    
Sbjct: 734 YSE-MKEMVMEVVTRHFRPEFINRIDEVVVFHPLGRAHLASIASIQLERLYKRLEERGYQ 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           + I++ AL+ +   GFD +YGAR +   K+++   +     ++P A  I  G LI   P 
Sbjct: 793 VTITQPALEFLGETGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGVPV 844

Query: 672 SLD 674
           +LD
Sbjct: 845 TLD 847


>gi|329297088|ref|ZP_08254424.1| protein disaggregation chaperone [Plautia stali symbiont]
          Length = 857

 Score =  777 bits (2007), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 496/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRLQIDSKPEPLDRLERRIIQLKLEQQALKKESDDASVK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ E+ + E +YA LE+ WK EK  +  +Q IK E+E+ RL + +A R  D   +S
Sbjct: 440 RLEMLESELAQKEREYAELEEEWKAEKASLTGTQNIKAELEQARLAMEQARRVGDLGQMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLASATQAE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEQELHARVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGYIGYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYIGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           ILLDE+EKA++DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     D
Sbjct: 674 ILLDEVEKAHADVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V  +FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +    L
Sbjct: 734 YAEMKDVVITVVGHHFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYQRLEERGYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            I  AALK +   G+D +YGAR
Sbjct: 794 HICDAALKLLGENGYDPVYGAR 815


>gi|406039852|ref|ZP_11047207.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Acinetobacter ursingii DSM
           16037 = CIP 107286]
          Length = 859

 Score =  777 bits (2007), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/623 (58%), Positives = 501/623 (80%), Gaps = 8/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++    ++I+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLNDLAKQDGNVILFIDELHTLVGAGKTDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL++KY  HHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKEKYAAHHGVQILDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+EIDSKPE +D+LERR+IQLK++ EA+KR+ D  SK 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDRLERRIIQLKMQLEAVKRDEDAGSKA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++++I+ +E +Y ++E+IWK EKTL++  ++ + E+++ R+  +KA R+ D    +
Sbjct: 437 EINHLEEQISIIEKEYNDMEEIWKAEKTLVEGDKKAQIELDQARIAFDKAQREGDLAEAA 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ L+   Q ++   N   K  L++TKV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 RLQYGVIPELQKRLE---QAEVAEENEEPK--LIRTKVTENEIAEVVSAATGIPVAKMLQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E  L  RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GEREKLLHMEEFLHNRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-- 551
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR I+F+NT+IVMTSNLGS  ++E+ +G  
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVIDFKNTVIVMTSNLGSQDVRELGEGAT 731

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E ++  VM+ V  +FRPEFINRID+++VF  L +  I  IA+IQL+ L+++L    + 
Sbjct: 732 DDE-VRAVVMSAVSQHFRPEFINRIDELVVFHSLKKSQIRGIADIQLDRLRSRLADREIG 790

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +   A   + + GFD +YGAR
Sbjct: 791 LTVDDTAFDLLIDAGFDPVYGAR 813


>gi|261346206|ref|ZP_05973850.1| ATP-dependent chaperone protein ClpB [Providencia rustigianii DSM
           4541]
 gi|282565512|gb|EFB71047.1| ATP-dependent chaperone protein ClpB [Providencia rustigianii DSM
           4541]
          Length = 857

 Score =  776 bits (2005), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/662 (57%), Positives = 517/662 (78%), Gaps = 15/662 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKK
Sbjct: 380 YITDRMLPDKAIDLIDEAGASLRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++++E+ + E +Y+ L++ WK EK  +  +Q IK E+E  R+++ KA R  D   +S
Sbjct: 440 RLEMLEEELAEKEREYSALDEEWKAEKASLTGTQHIKAELENTRIEMEKARRMGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L+  ++ +           LL+ KV   EIAEI++R TGIPVS++++
Sbjct: 500 ELQYGRIPELEKQLEAATKAE------GKSMKLLRNKVTDVEIAEILARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQQLHQRVIGQDEAVVAVSNAIRRSRAGLSDPNRPIGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQERFGMID 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V   FRPEFINRID+++VF  L ++ I +IANIQL  L  +L +   ++
Sbjct: 734 YSEMKNMVMEVVSHNFRPEFINRIDEVVVFHPLGKEQIANIANIQLARLYKRLEEHGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
             + AAL+KI   GFD I+GAR +   K+++   +     ++P A  I  G LI   P +
Sbjct: 794 TATAAALEKIGEAGFDPIFGARPL---KRAIQQEI-----ENPLAQEILSGKLIPGKPIT 845

Query: 673 LD 674
           LD
Sbjct: 846 LD 847


>gi|188534765|ref|YP_001908562.1| protein disaggregation chaperone [Erwinia tasmaniensis Et1/99]
 gi|188029807|emb|CAO97688.1| Chaperone ClpB [Erwinia tasmaniensis Et1/99]
          Length = 859

 Score =  776 bits (2005), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/624 (59%), Positives = 500/624 (80%), Gaps = 13/624 (2%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLSLDMGALVAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 261 GVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           QYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RY
Sbjct: 321 QYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S KR
Sbjct: 381 IADRQLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKLEQQALKKESDDASIKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L +++ E+N+ E +Y+ LE+ WK EK  +  +Q IK E+E+ +L + +A R+ D   +S+
Sbjct: 441 LEMLEGELNQKEREYSELEEEWKAEKASLSGTQHIKAELEQAKLNMEQARRQGDLGQMSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG++ +LE+ L   +Q +           LL+ +V   EIA++++R TGIPV+++++ 
Sbjct: 501 LQYGKIPELEKQLAAATQSE------GKTMRLLRNRVTDVEIADVLARWTGIPVARMMEG 554

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           ER+KLL +E  L  RV+GQ EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTEL
Sbjct: 555 ERDKLLRMEQELHTRVIGQQEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTEL 614

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+I
Sbjct: 615 CKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVI 674

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE----MEK 550
           LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E    +  
Sbjct: 675 LLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALSY 734

Query: 551 GDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNM 610
           G+   +K  VM+ V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   
Sbjct: 735 GE---MKELVMSVVSHSFRPEFINRIDELVVFHPLGEQHIASIARIQLQRLYQRLEERGY 791

Query: 611 DLKISKAALKKISNIGFDLIYGAR 634
            L IS AAL++++  G+D +YGAR
Sbjct: 792 TLHISDAALQQLAENGYDPVYGAR 815


>gi|56480150|ref|NP_708444.2| protein disaggregation chaperone [Shigella flexneri 2a str. 301]
 gi|380865371|sp|Q7UBW5.2|CLPB_SHIFL RecName: Full=Chaperone protein ClpB
 gi|56383701|gb|AAN44151.2| heat shock protein [Shigella flexneri 2a str. 301]
          Length = 857

 Score =  776 bits (2005), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/622 (59%), Positives = 497/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +++TI+ILRG+++++E+ H V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVQDTIAILRGVKERFELLHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E++  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELSDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATQLE------GKTMRLLRNKVTDAEIAEVLARWTGIPVSRMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++E+++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++
Sbjct: 734 YAHMKELVLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEI 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +S  G+D +YGAR
Sbjct: 794 HISDEALKLLSENGYDPVYGAR 815


>gi|268593139|ref|ZP_06127360.1| ATP-dependent chaperone protein ClpB [Providencia rettgeri DSM
           1131]
 gi|291311412|gb|EFE51865.1| ATP-dependent chaperone protein ClpB [Providencia rettgeri DSM
           1131]
          Length = 857

 Score =  776 bits (2005), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/663 (57%), Positives = 518/663 (78%), Gaps = 17/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGE+P  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEIPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKK
Sbjct: 380 YITDRMLPDKAIDLIDEAGASLRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++++E+ + E +Y+ LE+ WK EK  +  +Q IK E+E  R+++ KA R  D   +S
Sbjct: 440 RLEMLEEELTEKEREYSALEEEWKAEKASLTGTQHIKAELENTRIEMEKARRMGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  ++ +           LL+ KV   EIAEI++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATKAE------GKSMKLLRNKVTDVEIAEILARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQQLHQRVIGQDEAVVAVSNAIRRSRAGLSDPNRPIGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--G 551
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E     G
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQERFGMIG 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E +K  VM  V   FRPEFINRID+++VF  L ++ I +IANIQL  L  +L +   +
Sbjct: 734 YSE-MKDMVMEVVSHSFRPEFINRIDEVVVFHPLGKEQITNIANIQLARLYKRLEEHGYE 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           +  + AAL+KI   GFD I+GAR +   K+++   +     ++P A  I  G L+   P 
Sbjct: 793 VSATPAALEKIGEAGFDPIFGARPL---KRAIQQEI-----ENPLAQEILSGKLLPGKPV 844

Query: 672 SLD 674
            LD
Sbjct: 845 VLD 847


>gi|317493980|ref|ZP_07952397.1| ATP-dependent chaperone ClpB [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316918307|gb|EFV39649.1| ATP-dependent chaperone ClpB [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 857

 Score =  776 bits (2005), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 501/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAANLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+   E +Y+ LE+ WK EK  +  +Q IK EIE+ ++ + +A R  D   +S
Sbjct: 440 RLEMLNEELEHKEREYSELEEEWKAEKASLSGTQNIKAEIEQAKISLEQARRVGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG+L  LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 EIQYGKLPDLEKQLEAATQSE------GKTMKLLRNKVTDVEIAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER KLL +E+ L +RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERAKLLRMEDDLHERVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQDRFGQLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM+ V  +FRPEFINRID+ +VF  L++KNI +IA IQL  L  +L +    +
Sbjct: 734 YGEMKELVMSVVSHHFRPEFINRIDETVVFHPLDQKNIKAIARIQLERLYQRLEEKGYSV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            I+ AAL+++S  GFD +YGAR
Sbjct: 794 TITDAALEQLSKAGFDPVYGAR 815


>gi|377555554|ref|ZP_09785282.1| ATPase [endosymbiont of Bathymodiolus sp.]
          Length = 852

 Score =  776 bits (2004), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/621 (59%), Positives = 497/621 (80%), Gaps = 9/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIIN EVP  +  K++L LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINNEVPEGVKGKRLLSLDMAALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+   Q  +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTLNEY
Sbjct: 260 KAVLKELEAEQGQVILFIDELHTMVGAGKADGAMDAGNMLKPALARGDLHCMGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP  ++TI+ILRGL++KYEVHHGVEITDPAI+AA   S R
Sbjct: 320 REYIEKDAALERRFQKVLVDEPSEQDTIAILRGLKEKYEVHHGVEITDPAIIAAVTYSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE MDKLER+LIQLKIE  A+K+E D++SK+
Sbjct: 380 YITDRQLPDKAIDLIDEAASQIRMEIDSKPESMDKLERKLIQLKIERMALKKEKDKASKE 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R   ++  I KLE +YA+ E+IWK EK++++ +Q +KEE+E+ +  +  A R ++   +S
Sbjct: 440 RFKELEAHIKKLEKEYADFEEIWKREKSVVQGAQHLKEELEQAKSDLELAHRDNNLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE  + E    D Q      + TLL+ KV   EIA IV+R TGIPV K+++
Sbjct: 500 ELQYGKIPELETKIAEAEAADTQ------EMTLLRNKVTEAEIAHIVARWTGIPVDKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +E+++ KR+VGQD+A++ +S+A+RRSR+GLSD  RP GSFMF+GPTGVGKTE
Sbjct: 554 GEKDKLLQMESIIHKRLVGQDKAVTVISDAVRRSRAGLSDPNRPDGSFMFMGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ E++I+RIDMSEF+EKHS++RLIGAPPGY+GYE+GG LTE VRRKPYS+
Sbjct: 614 LTKALADFLFDTEQAIVRIDMSEFMEKHSVARLIGAPPGYVGYEQGGVLTEAVRRKPYSI 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS  I+E    D 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSYLIQENPGKDM 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
                 ++ E   +FRPEF+NRID+I+VF  L +  I SIA +Q+ IL+++L K++++L+
Sbjct: 734 SAELTQIVAE---HFRPEFVNRIDEIVVFNNLEKSQIKSIAALQVEILQSRLAKIDLELE 790

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +   A+  I + G+D ++GAR
Sbjct: 791 LDDNAMTLIVDRGYDPVFGAR 811


>gi|421727045|ref|ZP_16166211.1| protein disaggregation chaperone [Klebsiella oxytoca M5al]
 gi|410372260|gb|EKP26975.1| protein disaggregation chaperone [Klebsiella oxytoca M5al]
          Length = 857

 Score =  776 bits (2004), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/654 (57%), Positives = 508/654 (77%), Gaps = 15/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  +++L LD+  L+AG KYRGEFE RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGRRVLALDMGALVAGAKYRGEFEVRL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIV A+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVEAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDEASIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+   E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S
Sbjct: 440 RLDMLNEELADKERQYSVLEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ +   +Q +           LL+ KV   EIAE+++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQMAAATQSE------GKTMRLLRNKVTDAEIAEVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+  V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   ++
Sbjct: 734 YSHMKDLVLGVVSQSFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
            +S  ALK +S  G+D +YGAR +   K+++   +     ++P A  I  G+LI
Sbjct: 794 HLSDEALKLLSENGYDPVYGARPL---KRAIQQQI-----ENPLAQQILSGELI 839


>gi|238765381|ref|ZP_04626305.1| Chaperone protein clpB 1 [Yersinia kristensenii ATCC 33638]
 gi|238696423|gb|EEP89216.1| Chaperone protein clpB 1 [Yersinia kristensenii ATCC 33638]
          Length = 857

 Score =  776 bits (2004), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/663 (57%), Positives = 515/663 (77%), Gaps = 17/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ + +A R  D   +S
Sbjct: 440 RLEMLNTELEQKEREYSELEEEWKAEKAALTGTQNIKTELEQAKITLEQARRVGDLAQMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +  +           LL+ +V   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATALE------GKTMKLLRNRVTEAEIAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L KRV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEEDLHKRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALAMFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   E+ 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERS 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E +K  VM  V  +FRPEFINRID+++VF  L R ++ SIA+IQL  L  +L +    
Sbjct: 734 YTE-MKEMVMEVVTHHFRPEFINRIDEVVVFHPLGRAHLASIASIQLARLYKRLEERGYQ 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           + I++ AL+ +   GFD +YGAR +   K+++   +     ++P A  I  G LI   P 
Sbjct: 793 VTITQPALEFLGETGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGVPV 844

Query: 672 SLD 674
           +LD
Sbjct: 845 TLD 847


>gi|365834579|ref|ZP_09376024.1| ATP-dependent chaperone protein ClpB [Hafnia alvei ATCC 51873]
 gi|364568968|gb|EHM46597.1| ATP-dependent chaperone protein ClpB [Hafnia alvei ATCC 51873]
          Length = 857

 Score =  776 bits (2004), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 501/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGSLIAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAANLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+   E +Y+ LE+ WK EK  +  +Q IK EIE+ ++ + +A R  D   +S
Sbjct: 440 RLEMLNEELEHKEREYSELEEEWKAEKASLSGTQNIKAEIEQAKISLEQARRVGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG+L  LE+ L+  +Q +           LL+ KV   EIAE+++R TGIPVS++++
Sbjct: 500 EIQYGKLPGLEKQLEAATQSE------GKTMKLLRNKVTDVEIAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER KLL +E+ L +RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERAKLLRMEDDLHERVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++   + D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQDRFGQLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM+ V  +FRPEFINRID+ +VF  L++KNI +IA IQL  L  +L +    +
Sbjct: 734 YGEMKELVMSVVSHHFRPEFINRIDETVVFHPLDQKNIKAIARIQLERLYQRLEEKGYSV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            I+ AAL+++S  GFD +YGAR
Sbjct: 794 TITDAALEQLSKAGFDPVYGAR 815


>gi|389720734|ref|ZP_10187553.1| chaperone ATPase [Acinetobacter sp. HA]
 gi|388609418|gb|EIM38590.1| chaperone ATPase [Acinetobacter sp. HA]
          Length = 859

 Score =  776 bits (2003), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 359/622 (57%), Positives = 498/622 (80%), Gaps = 6/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGKRVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLKDLAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+ +Y  HHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKDRYATHHGVQILDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+E+DSKPE +DKLERRLIQLK++ EA+K++ D  +K 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMELDSKPEALDKLERRLIQLKMQLEAVKKDEDSGAKS 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++ +I  +E +Y+ LE+IW+ +K L+  ++ I+ ++++ R+ + KA R+ D    +
Sbjct: 437 EVKYLEDQIATVEKEYSELEEIWRADKALVAGNKDIQVKLDQARIALEKAQREGDLAEAA 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           + +YG + +L++ L+      I+    +    LL+ KV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 RYQYGVIPELQKQLER-----IEAAEESEAPKLLRDKVTDNEIAEVVSAATGIPVAKMLQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL++E  L KRVVGQ+EA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GERDKLLHMEEFLHKRVVGQEEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+NT+IVMTSNLGS  ++E+  G  
Sbjct: 672 LLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNTVIVMTSNLGSSDVRELGGGAT 731

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
           ++ ++  VMN V  +FRPEFINRID+I+VF  L +  I  IA+IQLN L+ +L + ++ L
Sbjct: 732 RDEVRSVVMNAVSEHFRPEFINRIDEIVVFHSLEKAQIRGIADIQLNRLRQRLAERDLRL 791

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            +  +A  ++ ++GFD +YGAR
Sbjct: 792 SVEDSAFDQLIDVGFDPLYGAR 813


>gi|90417179|ref|ZP_01225106.1| ClpB protein [gamma proteobacterium HTCC2207]
 gi|90330955|gb|EAS46216.1| ClpB protein [marine gamma proteobacterium HTCC2207]
          Length = 855

 Score =  775 bits (2002), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/623 (59%), Positives = 510/623 (81%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  LLAG K+RG+FE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLTLDLGALLAGAKFRGDFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK++S  +  II+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 259 KAVLKDLSKQEGQIILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R++IEKDAA ERRFQK+LVEEP  E+T++ILRGL+++YEVHHGVEITD AIVAA++LS R
Sbjct: 319 RKFIEKDAALERRFQKVLVEEPSEEDTVAILRGLKERYEVHHGVEITDSAIVAAAKLSQR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDE+ ++I++EIDSKPE MD+LERRLIQLKIE EA+K++ DE+S+K
Sbjct: 379 YITDRQLPDKAIDLIDESGSRIRMEIDSKPEEMDRLERRLIQLKIEREAVKKDKDEASRK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R   ++ +I +L  +YA+LE+IWK EK  ++ S  IK E+E+ ++ +  A R  + + ++
Sbjct: 439 RQQKLEDDIAELGGEYADLEEIWKAEKASMQGSTHIKAELEQAKVNLEAAHRSGNLEKMA 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++Y  + +LE+ L   +  ++Q+        LL+ +V  EE+AE+V++ TGIPVSK+++
Sbjct: 499 QIQYSIIPELEKQLA-SANSEVQIEKR-----LLRNRVTEEEVAEVVAKWTGIPVSKMLE 552

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RV+GQ EA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 553 GERDKLLRMEDSLHRRVMGQSEAVVAVSNAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTE 612

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F++EE+++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 613 LCKSLAEFLFDSEEAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSV 672

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGSD I +M  G++
Sbjct: 673 LLLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSDVI-QMLAGEE 731

Query: 554 --EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             +++K AVM+ V  +FRPEFINR+D+++VF  L +  +  IA+IQL++L+ +L +  + 
Sbjct: 732 NYDVMKSAVMDVVSGHFRPEFINRVDEVVVFHPLTKDQLRGIASIQLDLLRKRLAEHELQ 791

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +S+  L K+   GFD +YGAR
Sbjct: 792 LSLSEEVLDKLLEAGFDPVYGAR 814


>gi|420747927|ref|ZP_15224009.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-64]
 gi|391614450|gb|EIS56315.1| ATP-dependent chaperone protein ClpB [Yersinia pestis PY-64]
          Length = 857

 Score =  775 bits (2002), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/662 (56%), Positives = 515/662 (77%), Gaps = 15/662 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGSLIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+IT PAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITAPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ + +A R  D   +S
Sbjct: 440 RLEMLNTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +  +           LL+ +V   E+AE+++R TGIPVS++++
Sbjct: 500 ELQYGTIPELEKQLAAATALE------GKTMKLLRNRVTEIEVAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L +RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEQDLHQRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + +
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQEHFGQMN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM+ V  +FRPEFINRID+++VF  L R ++ SIANIQL  L  +L +   ++
Sbjct: 734 YSEMKTVVMDVVSHHFRPEFINRIDEVVVFHPLGRAHLASIANIQLERLYKRLEERGYEV 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
           KI++ AL+ +   GFD +YGAR +   K+++   +     ++P A  I  G LI   P +
Sbjct: 794 KITQPALEFLGEAGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGIPVT 845

Query: 673 LD 674
           LD
Sbjct: 846 LD 847


>gi|398795524|ref|ZP_10555375.1| ATP-dependent chaperone ClpB [Pantoea sp. YR343]
 gi|398206177|gb|EJM92948.1| ATP-dependent chaperone ClpB [Pantoea sp. YR343]
          Length = 857

 Score =  775 bits (2002), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/622 (59%), Positives = 495/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKGRRVLALDMGSLVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KGVLSDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQFIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRLQMDSKPESLDRLERRIIQLKLEQQALKKESDDASVK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ E+++ E +YA LE+ WK EK  +  +Q IK E+E+ RL + +A R  D   +S
Sbjct: 440 RLEMLESELDQKEREYAELEEEWKAEKASLTGTQNIKAELEQARLTMEQARRVGDLGQMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q      +      LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLAIATQ------SEGKTMKLLRNRVTDVEIADVLARWTGIPVARMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGSLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V  +FRPEFINRIDD++VF  L  K+I SIA IQL  L  +L +    L
Sbjct: 734 YAEMKEVVMTVVGQHFRPEFINRIDDMVVFHPLGEKHIASIAQIQLQRLYKRLEERGYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  ALK +   G+D +YGAR
Sbjct: 794 HISDEALKLLGENGYDPVYGAR 815


>gi|37525237|ref|NP_928581.1| protein disaggregation chaperone [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|54035796|sp|Q7N788.1|CLPB_PHOLL RecName: Full=Chaperone protein ClpB
 gi|36784664|emb|CAE13564.1| heat shock protein F84.1 [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 857

 Score =  775 bits (2002), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/663 (56%), Positives = 518/663 (78%), Gaps = 15/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKK
Sbjct: 380 YISDRMLPDKAIDLIDEAGASLRMQMDSKPEALDRLERRVIQLKLEQQALKKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+   E +Y+ LE+ WK EK  +  +Q IK E+E  R+ + +A R  D   +S
Sbjct: 440 RLEMLNEELLVKEREYSELEEEWKAEKAALTGTQHIKAELENARISLEQARRSGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG++  LE+ L   +Q +      +    LL+ KV   EIA+I++R TGIPV+++++
Sbjct: 500 EIQYGKIPGLEKQLAAATQAE------SKHMKLLRNKVTDAEIADILARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +E  L KRV+GQDEA++A+SNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEKDKLLRMEQELHKRVIGQDEAVNAISNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFLFDSDDAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     +
Sbjct: 674 ILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDMIQERFGSLN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  VM  V   FRPEFINRID+ +VF  L R+++ +IA+IQL  L  +L +    +
Sbjct: 734 YDEMKDIVMGIVSHNFRPEFINRIDEAVVFHPLGRRHLSAIADIQLQRLYKRLEERGYQV 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
            I++ AL+ ++  GFD +YGAR +   K+++   +     ++P A  I  G L+   P +
Sbjct: 794 TITQQALEILAEAGFDPVYGARPL---KRAIQQEI-----ENPLAQKILSGQLLPGKPVT 845

Query: 673 LDT 675
           LD 
Sbjct: 846 LDV 848


>gi|375335749|ref|ZP_09777093.1| ATP-dependent chaperone protein ClpB [Succinivibrionaceae bacterium
           WG-1]
          Length = 862

 Score =  775 bits (2002), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/623 (59%), Positives = 492/623 (78%), Gaps = 8/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRI+ GEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAICEGLAQRIVKGEVPEGLKNKRVLALDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L  ++  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 260 KAVLNALAKEEGRVILFIDELHTMVGAGKADGAMDAGNMLKPALARGDLHCMGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E TI+ILRGL+++YE+HH V ITDPAIVAA+ LS R
Sbjct: 320 RKYIEKDAALERRFQKVFVGEPSVENTIAILRGLKERYELHHHVTITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAAA I++++DSKPE +DKLER+LIQLK+E EAI +E DE+SKK
Sbjct: 380 YITDRQLPDKAIDLIDEAAASIRLQMDSKPEALDKLERKLIQLKMEREAIAKENDEASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL LI  +I   E +Y NLE++WK EK  +  +Q IKEE+EK R   + A+R  D  T+S
Sbjct: 440 RLALIDIDIFDKEKEYKNLEELWKNEKAGLLGTQHIKEELEKARHDFDVASRSGDLATMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           K++YG + +L+  L+   +  +          LL+ KV   EIAE+VSR TGIPVSK+++
Sbjct: 500 KIQYGVIPQLQGQLESAEKNKVD-----ESKVLLRNKVTENEIAEVVSRATGIPVSKMLE 554

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER KLLN+EN L  RV+GQDEA+ A++N+IRRSR+GLSD  RP GSF+F+GPTGVGKTE
Sbjct: 555 GERAKLLNMENSLHSRVIGQDEAVVAIANSIRRSRAGLSDPNRPIGSFLFMGPTGVGKTE 614

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+  ++++RIDMSEF+EK S+SRL+GAPPGY+GY+EGGYLTE VRR+PYS+
Sbjct: 615 LCKSLAEFLFDTTDAMVRIDMSEFMEKFSVSRLVGAPPGYVGYDEGGYLTEAVRRRPYSV 674

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSN+GSD I+E E G K
Sbjct: 675 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNIGSDLIQE-ETGKK 733

Query: 554 EI--IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
               IK  ++ E+   F+PEF+NRID+ +VF  L++++I +IA IQL+ L  +L   N +
Sbjct: 734 SYNEIKSDLLQELSTRFKPEFLNRIDETVVFHPLSQEHIRNIAKIQLDTLTKRLSANNFN 793

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           ++I    L +I+ +GFD +YGAR
Sbjct: 794 VEIKDHMLSRIAELGFDPVYGAR 816


>gi|422009842|ref|ZP_16356824.1| protein disaggregation chaperone [Providencia rettgeri Dmel1]
 gi|414092015|gb|EKT53694.1| protein disaggregation chaperone [Providencia rettgeri Dmel1]
          Length = 857

 Score =  775 bits (2002), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 382/663 (57%), Positives = 518/663 (78%), Gaps = 17/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGE+P  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEIPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDPALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKK
Sbjct: 380 YITDRMLPDKAIDLIDEAGASLRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++++E+ + E +Y+ LE+ WK EK  +  +Q IK E+E  R+++ KA R  D   +S
Sbjct: 440 RLEMLEEELAEKEREYSALEEEWKAEKASLTGTQHIKAELENTRIEMEKARRMGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  ++ +           LL+ KV   EIAEI++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLEAATKAE------GKSMKLLRNKVTDVEIAEILARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQQLHQRVIGQDEAVVAVSNAIRRSRAGLSDPNRPIGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--G 551
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E     G
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDLIQERFGMIG 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E +K  VM  V   FRPEFINRID+++VF  L ++ I +IANIQL  L  +L +   +
Sbjct: 734 YSE-MKDMVMEVVSHSFRPEFINRIDEVVVFHPLGKEQITNIANIQLARLYKRLEEHGYE 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           +  + AAL+KI   GFD I+GAR +   K+++   +     ++P A  I  G L+   P 
Sbjct: 793 VSATPAALEKIGEAGFDPIFGARPL---KRAIQQEI-----ENPLAQEILSGKLLPGKPV 844

Query: 672 SLD 674
            LD
Sbjct: 845 ILD 847


>gi|383188698|ref|YP_005198826.1| ATP-dependent chaperone ClpB [Rahnella aquatilis CIP 78.65 = ATCC
           33071]
 gi|371586956|gb|AEX50686.1| ATP-dependent chaperone ClpB [Rahnella aquatilis CIP 78.65 = ATCC
           33071]
          Length = 857

 Score =  775 bits (2000), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/662 (56%), Positives = 514/662 (77%), Gaps = 15/662 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KGVLSDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQFIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E +A+K+E D++S K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASVK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ E+N+ E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ + +A R  D   +S
Sbjct: 440 RLEMLETELNQKEREYSELEEEWKAEKASLTGTQNIKAELEQAKITLEQARRVGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLAAATQAE------GKTMKLLRNRVTDVEIADVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEEELHNRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +FN++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALATFLFNSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++   +  
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDIIQQHFGEAS 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K +VM  V   FRPEFINRID+++VF  L   +I +IA IQL  L  +L +     
Sbjct: 734 YAQMKESVMEVVTHSFRPEFINRIDEVVVFHPLGHAHIKNIAKIQLERLYKRLEEHGYTA 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
            ++ AAL+ + N GFD +YGAR +   K+++   +     ++P A  I  G LI   P +
Sbjct: 794 TLTDAALELLGNTGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGKPIT 845

Query: 673 LD 674
           +D
Sbjct: 846 VD 847


>gi|238760706|ref|ZP_04621827.1| Chaperone protein clpB 1 [Yersinia aldovae ATCC 35236]
 gi|238701079|gb|EEP93675.1| Chaperone protein clpB 1 [Yersinia aldovae ATCC 35236]
          Length = 857

 Score =  775 bits (2000), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/663 (57%), Positives = 514/663 (77%), Gaps = 17/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGSLIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ + +A R  D   +S
Sbjct: 440 RLEMLNTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLTRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +  +           LL+ +V   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATALE------GKTMKLLRNRVTEAEIAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L KRV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEQDLHKRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   E+ 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERS 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E +K  VM  V  +FRPEFINRID+++VF  L R ++ SIA+IQL  L  +L +    
Sbjct: 734 YSE-MKEMVMEVVTHHFRPEFINRIDEVVVFHPLGRAHLASIASIQLERLYKRLEERGYQ 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           + I++ AL+ +   GFD +YGAR +   K+++   +     ++P A  I  G LI   P 
Sbjct: 793 VTITQPALEFLGETGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGVPV 844

Query: 672 SLD 674
           +LD
Sbjct: 845 TLD 847


>gi|259909394|ref|YP_002649750.1| protein disaggregation chaperone [Erwinia pyrifoliae Ep1/96]
 gi|387872373|ref|YP_005803754.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
           pyrifoliae DSM 12163]
 gi|224965016|emb|CAX56546.1| Chaperone protein [Erwinia pyrifoliae Ep1/96]
 gi|283479467|emb|CAY75383.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
           pyrifoliae DSM 12163]
          Length = 857

 Score =  774 bits (1999), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 368/624 (58%), Positives = 498/624 (79%), Gaps = 13/624 (2%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYR
Sbjct: 261 GVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           QYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RY
Sbjct: 321 QYIEKDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E DE+S KR
Sbjct: 381 IADRQLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKLEQQALKKESDEASIKR 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L +++ E+++ E +Y+ LE+ WK EK  +  +Q IK ++E+ +L + +A R+ D   +S+
Sbjct: 441 LKMLEGELSQKESEYSELEEEWKAEKASLSGTQHIKAQLEQAKLNMEQARRQGDLGQMSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           L+YG++  LE+ L   +Q +           LL+ +V   EIA++++R TGIPV+++++ 
Sbjct: 501 LQYGKIPDLEKQLAAATQSE------GKTMRLLRNRVTDVEIADVLARWTGIPVARMMEG 554

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           ER+KLL +E  L  RV+GQ EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTEL
Sbjct: 555 ERDKLLRMEQQLHTRVIGQHEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTEL 614

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+I
Sbjct: 615 CKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVI 674

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE----MEK 550
           LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E    +  
Sbjct: 675 LLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALSY 734

Query: 551 GDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNM 610
           G+   +K  VM+ V   FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +   
Sbjct: 735 GE---MKELVMSVVSHSFRPEFINRIDELVVFHPLGEKHIASIARIQLQRLYQRLEERGF 791

Query: 611 DLKISKAALKKISNIGFDLIYGAR 634
            L +S AAL+++   G+D +YGAR
Sbjct: 792 TLHVSDAALQQLGENGYDPVYGAR 815


>gi|262376331|ref|ZP_06069561.1| ATP-dependent chaperone ClpB [Acinetobacter lwoffii SH145]
 gi|262308932|gb|EEY90065.1| ATP-dependent chaperone ClpB [Acinetobacter lwoffii SH145]
 gi|407008463|gb|EKE23828.1| hypothetical protein ACD_6C00314G0001 [uncultured bacterium]
          Length = 859

 Score =  774 bits (1999), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/625 (57%), Positives = 495/625 (79%), Gaps = 12/625 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGKRVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+I+ ++ +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLKDIAKHEGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+ +Y  HHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKDRYATHHGVQILDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+E+DSKPE +DKLERRLIQLK++ EA+K++ D  +K 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMELDSKPEALDKLERRLIQLKMQLEAVKKDEDSGAKA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  +  +I  +E +Y +LE++W+ +K L++ ++ ++ ++++ R  + KA R+ D    +
Sbjct: 437 EIQYLSDQIATVEKEYHDLEEVWRADKALVEGNKDVQIKLDQARTALEKAQREGDLGEAA 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFT---LLKTKVGSEEIAEIVSRTTGIPVSK 370
           +L+YG + +L        QK ++L   A++     LL+ KV   EIAE+VS  TGIPV+K
Sbjct: 497 RLQYGVIPEL--------QKQLELAEKADESATPKLLRNKVTDNEIAEVVSAATGIPVAK 548

Query: 371 IVQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVG 430
           ++Q ER+KLL++E  L  RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVG
Sbjct: 549 MLQGERDKLLHMEEFLHNRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVG 608

Query: 431 KTELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKP 490
           KTEL K L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKP
Sbjct: 609 KTELTKALANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKP 668

Query: 491 YSLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM-E 549
           YS+IL DE+EKA+ DVFNILLQ+LDDGRLTD++GR ++F+N++IVMTSNLGS  ++E+  
Sbjct: 669 YSVILFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVDFKNSVIVMTSNLGSQDVRELGG 728

Query: 550 KGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
              KE ++  VMN V  +FRPEFINRID+++VF  L +  I  IA+IQL+ L+ +L + +
Sbjct: 729 NATKEEVRTVVMNAVSEHFRPEFINRIDELVVFHALEKDQIRGIADIQLDRLRQRLAERD 788

Query: 610 MDLKISKAALKKISNIGFDLIYGAR 634
           M L +  +A  ++   GFD +YGAR
Sbjct: 789 MRLSVDDSAFDQLIEAGFDPLYGAR 813


>gi|322831464|ref|YP_004211491.1| ATP-dependent chaperone ClpB [Rahnella sp. Y9602]
 gi|321166665|gb|ADW72364.1| ATP-dependent chaperone ClpB [Rahnella sp. Y9602]
          Length = 857

 Score =  774 bits (1999), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 374/662 (56%), Positives = 514/662 (77%), Gaps = 15/662 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIINGEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KGVLSDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQFIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I++++DSKPE +D+L+RR+IQLK+E +A+K+E D++S K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRMQMDSKPESLDRLDRRIIQLKLEQQALKKESDDASVK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ E+++ E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ + +A R  D   +S
Sbjct: 440 RLEMLETELSQKEREYSELEEEWKAEKASLTGTQNIKAELEQAKITLEQARRVGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q D           LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLAAATQAD------GKTMKLLRNRVTDVEIADVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEEELHNRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +FN++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALATFLFNSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I++   +  
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDIIQQHFGEAS 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K +VM  V   FRPEFINRID+++VF  L   +I +IA IQL  L  +L +     
Sbjct: 734 YAQMKASVMEVVTHSFRPEFINRIDEVVVFHPLGHAHIKNIAKIQLARLYKRLEEHGYTA 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
            ++ AAL+ + N GFD +YGAR +   K+++   +     ++P A  I  G LI   P +
Sbjct: 794 TLTDAALELLGNTGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGKPIT 845

Query: 673 LD 674
           +D
Sbjct: 846 VD 847


>gi|300722275|ref|YP_003711559.1| ATP-dependent protease [Xenorhabdus nematophila ATCC 19061]
 gi|297628776|emb|CBJ89354.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Xenorhabdus nematophila ATCC
           19061]
          Length = 857

 Score =  774 bits (1999), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/622 (60%), Positives = 500/622 (80%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGSIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKK
Sbjct: 380 YISDRMLPDKAIDLIDEAGASLRMQMDSKPEALDRLERRVIQLKLEQQALKKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E +Y+ LE+ WK EK  +  +Q IK E+E  R+++ +A R  D   +S
Sbjct: 440 RLEMLNAELTEKEREYSELEEEWKAEKAELSGTQNIKAELENARIELERARRSGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG++ +LE+ L   +  +       +   LL+ KV   EIAEI++R TGIPVS++++
Sbjct: 500 EIQYGKIPELEKRLATATASE------NHHMKLLRNKVTDSEIAEILARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +E  L KRV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 554 SEKDKLLRMEQELHKRVIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRTI+FRNT+++MTSNLGSD I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTIDFRNTVVIMTSNLGSDMIQERFGSLD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V  +FRPEFINRID+I+VF  L +++++SIANIQL  L  +L +    +
Sbjct: 734 YAGMKDMVMEVVGHHFRPEFINRIDEIVVFHPLGKEHLVSIANIQLQRLYQRLEERGYQV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            ++ +AL K+S  GFD +YGAR
Sbjct: 794 VMTPSALDKLSEAGFDPVYGAR 815


>gi|238756475|ref|ZP_04617782.1| Chaperone protein clpB 1 [Yersinia ruckeri ATCC 29473]
 gi|238705324|gb|EEP97734.1| Chaperone protein clpB 1 [Yersinia ruckeri ATCC 29473]
          Length = 857

 Score =  774 bits (1998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/665 (56%), Positives = 516/665 (77%), Gaps = 17/665 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ + +A R  D   +S
Sbjct: 440 RLEMLNTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKISLEQARRVGDLGKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +       N   LL+ +V   EIA++++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATQAE------GNTMKLLRNRVTETEIADVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L KRV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEQDLHKRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   E+ 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERS 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E +K  VM  V  +FRPEFINRID+++VF  L R  + SIA IQL  L  +L +   +
Sbjct: 734 YTE-MKNMVMEIVGHHFRPEFINRIDEVVVFHPLGRAQLASIAKIQLARLYKRLEERGYE 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           + I++ AL+ +   GFD +YGAR +   K+++   +     ++P A  I  G L+   P 
Sbjct: 793 VTITEPALEFLGEAGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLLPGIPV 844

Query: 672 SLDTL 676
           +LD +
Sbjct: 845 TLDVV 849


>gi|307132185|ref|YP_003884201.1| ClpB protein [Dickeya dadantii 3937]
 gi|306529714|gb|ADM99644.1| ClpB protein [Dickeya dadantii 3937]
          Length = 857

 Score =  774 bits (1998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/663 (55%), Positives = 516/663 (77%), Gaps = 15/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E DE+S K
Sbjct: 380 YISDRKLPDKAIDLIDEAASSIRMQIDSKPEPLDRLDRRIIQLKLEQQALKKESDEASLK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E +Y+ LE+ WK EK  +  +Q IK  +E+ ++ + +A R+ D   +S
Sbjct: 440 RLEILNAELEQKEREYSKLEEEWKAEKASLTGTQNIKAALEQAKISLEQARRQGDLGRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +Q +           LL+ +V   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATQVE------GKTMHLLRNRVTDAEIAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L +RV+GQ+EA+ AV+N+IRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQELHQRVIGQNEAVEAVANSIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL++ +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLASFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + +
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGEMN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              ++  V++ V  +F  EFI  ID+++VF  L + +I SIA IQL  L  ++ +    +
Sbjct: 734 YNQMRDMVLSVVSHHFCHEFIICIDEVVVFHPLGKSHITSIAQIQLQRLYKRMEERGYTV 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
            IS AAL+ +   GFD +YGAR +   K+++  ++     ++P A  I  G L+   P +
Sbjct: 794 TISDAALELLGKSGFDPVYGARPL---KRAIQQMI-----ENPLAQQILSGALVPGKPVT 845

Query: 673 LDT 675
           LD 
Sbjct: 846 LDA 848


>gi|317049247|ref|YP_004116895.1| ATP-dependent chaperone ClpB [Pantoea sp. At-9b]
 gi|316950864|gb|ADU70339.1| ATP-dependent chaperone ClpB [Pantoea sp. At-9b]
          Length = 857

 Score =  774 bits (1998), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 369/622 (59%), Positives = 496/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E D++S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRLQIDSKPEPLDRLDRRIIQLKLEQQALKKESDDASVK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ E+++ E +YA LE+ WK EK  +  +Q IK E+E+ RL + +A R  D   +S
Sbjct: 440 RLEMLETELDQKEREYAELEEEWKAEKASLTGTQNIKAELEQARLSLEQARRVGDLGQMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L   +Q      +      LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGKIPALEKQLAAATQ------SEGKTMKLLRNRVTDVEIADVLARWTGIPVARMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEQELHARVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM+ V  +FRPEFINRID+++VF  L  K+I SIA IQL  L  +L +    L
Sbjct: 734 YPEMKDLVMSVVGHHFRPEFINRIDEVVVFHPLGEKHIASIAQIQLQRLYKRLEERGYQL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  A++ +   G+D +YGAR
Sbjct: 794 HISDEAIRLLGENGYDPVYGAR 815


>gi|119505584|ref|ZP_01627655.1| ATPase with chaperone activity, ATP-binding subunit [marine gamma
           proteobacterium HTCC2080]
 gi|119458527|gb|EAW39631.1| ATPase with chaperone activity, ATP-binding subunit [marine gamma
           proteobacterium HTCC2080]
          Length = 859

 Score =  773 bits (1997), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/652 (57%), Positives = 518/652 (79%), Gaps = 17/652 (2%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAI+EGLAQR+INGEVP  L +K+IL LD+  LLAG K+RG+FE+RLK
Sbjct: 201 NPVLIGEPGVGKTAIIEGLAQRVINGEVPEGLKNKRILSLDLGALLAGAKFRGDFEERLK 260

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L E+S  +  II+F+DELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYR
Sbjct: 261 SVLNELSKEEGRIILFVDELHTMVGAGKSEGSMDAGNMLKPALARGELHCVGATTLNEYR 320

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           Q++EKDAA ERRFQK+LV+EP  E+TI+ILRGL+++YEVHHGV +TD AI+AA++LS RY
Sbjct: 321 QFVEKDAALERRFQKVLVDEPSEEDTIAILRGLKERYEVHHGVAVTDSAIIAAAKLSQRY 380

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DR +PDKAIDLIDEAA++I++EIDSKPE MD+LERRLIQLKIE EA+ ++  E+++K+
Sbjct: 381 ITDRQLPDKAIDLIDEAASRIRMEIDSKPESMDRLERRLIQLKIEREAVNKDQTEAAQKQ 440

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           + L+  ++ +L+ + ++L++I   EK  ++ + +IK  IE+ +L +  A R  D   +S+
Sbjct: 441 VALLDVQVAELDQELSDLDEILTAEKAAVQGAAKIKAAIEQAKLDLEMAQRAGDLTRMSE 500

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           ++YGEL +L++ L    Q + Q P       LL+ +V  EE+AE+VSR TGIP+SK+++ 
Sbjct: 501 IQYGELPELDKQLGIAEQVE-QGPTQ-----LLRNRVTEEEVAEVVSRWTGIPISKMLEG 554

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           +REKLL +E++L +RVVGQDEA+ AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTEL
Sbjct: 555 DREKLLRMESVLHERVVGQDEAVIAVANAVRRSRAGLSDPNRPNGSFLFLGPTGVGKTEL 614

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L++ +F+++++++R+DMSEF+EKHS++RLIGAPPGY+GYE GGYLTE VRR+PYSL+
Sbjct: 615 CKALASFVFDSDQAMVRLDMSEFMEKHSVARLIGAPPGYVGYEAGGYLTEAVRRRPYSLL 674

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK- 553
           LLDE+EKA+ DVFNILLQ+L+DGRLTD +GRT++F+NT+IVMTSNLGSD I+EM  GD+ 
Sbjct: 675 LLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFKNTVIVMTSNLGSDLIQEM-AGDER 733

Query: 554 -EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K AVM  V  +FRPEFINR+D+ +VF  L  + I  IANIQ+  L+++L + ++ L
Sbjct: 734 YDAMKAAVMGVVGRHFRPEFINRVDETVVFHPLAEEQIRGIANIQVESLRHRLAERDLAL 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGD 664
           ++S   L  ++  GFD ++GAR +   K+++  LL     ++P A  I  GD
Sbjct: 794 QLSDEVLDHLAEAGFDPVFGARPL---KRAIQQLL-----ENPLAQQILQGD 837


>gi|292487321|ref|YP_003530193.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
           amylovora CFBP1430]
 gi|291552740|emb|CBA19785.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
           amylovora CFBP1430]
 gi|312171427|emb|CBX79686.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
           amylovora ATCC BAA-2158]
          Length = 857

 Score =  773 bits (1996), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/625 (58%), Positives = 498/625 (79%), Gaps = 13/625 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKLEQQALKKESDDASIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ E+ + E +Y+ LE+ WK EK  +  +Q IK E+E+ +L + +A R+ D   +S
Sbjct: 440 RLEMLEGELGQKESEYSELEEEWKAEKASLSGTQHIKAELEQAKLNMEQARRQGDLGQMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L   +Q +           LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGKIPDLEKQLAAATQSE------GKTMRLLRNRVTDVEIADVLARWTGIPVARMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQ EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEQELHTRVIGQQEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE----ME 549
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E    + 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALN 733

Query: 550 KGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
            G+   +K  VM+ V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +  
Sbjct: 734 YGE---MKELVMSVVSQNFRPEFINRIDELVVFHPLGEEHIASIARIQLQRLYQRLEERG 790

Query: 610 MDLKISKAALKKISNIGFDLIYGAR 634
             L +S AAL+++   G+D +YGAR
Sbjct: 791 FTLHVSDAALQQLGENGYDPVYGAR 815


>gi|238752926|ref|ZP_04614388.1| Chaperone protein clpB 1 [Yersinia rohdei ATCC 43380]
 gi|238708834|gb|EEQ01090.1| Chaperone protein clpB 1 [Yersinia rohdei ATCC 43380]
          Length = 857

 Score =  773 bits (1995), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/663 (57%), Positives = 515/663 (77%), Gaps = 17/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ + +A R  D   +S
Sbjct: 440 RLEMLNTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +  + Q         LL+ +V   E+AE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATALEGQ------TMKLLRNRVTEVEVAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L KRV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEEDLHKRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALAMFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   E+ 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERS 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E +K  VM  V  +FRPEFINRID+++VF  L R ++ SIANIQL  L  +L +    
Sbjct: 734 YAE-MKDMVMEVVTHHFRPEFINRIDEVVVFHPLGRAHLASIANIQLERLYKRLEERGYQ 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           + I++ AL+ +   GFD +YGAR +   K+++   +     ++P A  I  G LI   P 
Sbjct: 793 VTITQPALEFLGEAGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGIPV 844

Query: 672 SLD 674
           +LD
Sbjct: 845 TLD 847


>gi|238798951|ref|ZP_04642414.1| Chaperone protein clpB 1 [Yersinia mollaretii ATCC 43969]
 gi|238717180|gb|EEQ09033.1| Chaperone protein clpB 1 [Yersinia mollaretii ATCC 43969]
          Length = 857

 Score =  773 bits (1995), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/663 (56%), Positives = 516/663 (77%), Gaps = 17/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ + +A R  D   +S
Sbjct: 440 RLEMLNTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +  +           LL+ +V   EIA++++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATALE------GKTMKLLRNRVTEVEIADVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L KRV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEQDLHKRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   E+ 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERS 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E +K  VM  V  +FRPEFINRID+++VF  L R ++ SIA+IQL  L  +L +    
Sbjct: 734 YTE-MKNMVMEVVTHHFRPEFINRIDEVVVFHPLGRAHLASIASIQLERLYKRLEERGYQ 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           + I+++AL+ +   GFD +YGAR +   K+++   +     ++P +  I  G LI   P 
Sbjct: 793 VTITQSALEFLGEAGFDPVYGARPL---KRAIQQEI-----ENPLSQQILSGKLIPGVPV 844

Query: 672 SLD 674
           +LD
Sbjct: 845 TLD 847


>gi|339477952|ref|YP_004706772.1| ATP-dependent chaperone protein ClpB [Candidatus Moranella endobia
           PCIT]
 gi|338172503|gb|AEI74904.1| ATP-dependent chaperone protein ClpB [Candidatus Moranella endobia
           PCIT]
          Length = 857

 Score =  773 bits (1995), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/664 (57%), Positives = 512/664 (77%), Gaps = 15/664 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRI+NGEVP  L + ++L LD+  L+AG KYRGEFE RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIVNGEVPEGLKNNRVLSLDMGSLVAGAKYRGEFEARL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + +II+FIDELHTM+G GK +G++DA NMLKP L+RGELHC+GATTLNEY
Sbjct: 260 KSVLHDLSKQEGNIILFIDELHTMVGAGKADGAMDASNMLKPMLARGELHCVGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R++IEKDAA ERRFQK+ + EP +E TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RKFIEKDAALERRFQKVFIAEPGVEATIAILRGLKERYELHHHVQITDPAIVAAANLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E D++S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRIQIDSKPEELDRLERRIIQLKLEQQALKKEMDDASVK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ K E  Y+ LE+ WK EK  +  +Q +K E+E+ ++ I +A R  D   +S
Sbjct: 440 RLTMLNNELTKKERDYSELEEEWKAEKASLSGTQNLKAELEQTKISIEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG+L +LE+ L+  SQ +      +    LL+ +V   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKLPELEKQLEAASQAE------SKGLRLLRNRVTDIEIAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER KL+ +E  L K V+GQ EA++AVSNAIRRSR+GL+D  RP GSFMFLGPTGVGKTE
Sbjct: 554 SERAKLVRMEQHLQKIVIGQHEAVAAVSNAIRRSRAGLADPNRPIGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++E++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE+VRR+PYS+
Sbjct: 614 LCKALATFLFDSEDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTELVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           +LLDEIEKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGS+ I+E  ++ +
Sbjct: 674 MLLDEIEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSEIIQERFDQIN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              IK  V+  V   FRPEFINR+D+++VF  LNR +I+ IA IQL  L  +L +     
Sbjct: 734 YLEIKDVVLEVVSHNFRPEFINRVDEVVVFHPLNRNHIIEIAQIQLRRLYQRLEERGYTA 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
            IS  AL  +   GFD +YGAR +   K+++    ++I  ++P A  I  G L+   P  
Sbjct: 794 NISDEALVLLGKSGFDPVYGARPM---KRAIQ---QEI--ENPLAQQILSGQLLPGKPVK 845

Query: 673 LDTL 676
           L+ L
Sbjct: 846 LEVL 849


>gi|146329388|ref|YP_001209038.1| ATP-dependent protease ClpB [Dichelobacter nodosus VCS1703A]
 gi|146232858|gb|ABQ13836.1| ATP-dependent protease ClpB [Dichelobacter nodosus VCS1703A]
          Length = 857

 Score =  773 bits (1995), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/663 (57%), Positives = 523/663 (78%), Gaps = 16/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI +  VP SL  K++L LD+A LLAGTKYRGEFE+RL
Sbjct: 201 NNPVLIGEPGVGKTAIVEGLAQRIADRAVPESLKGKRLLSLDLAALLAGTKYRGEFEERL 260

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L EI+     II+FIDE+HTM+G GK EGS+DAGNMLKP L+RG+LHCIGATTL+EY
Sbjct: 261 KAVLDEITKADGQIILFIDEIHTMVGAGKSEGSLDAGNMLKPALARGDLHCIGATTLDEY 320

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQY+EKDAA ERRFQK++V+EP +E+TI+ILRGLQ++YEVHHG+ ITDPA+VAA++LS+R
Sbjct: 321 RQYMEKDAALERRFQKVIVDEPSVEDTIAILRGLQERYEVHHGINITDPALVAAAQLSHR 380

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YIS R +PDKAIDL+DEAAA+I++E+DSKPE+MDK++RRLIQL+IE  A+++E D +SK+
Sbjct: 381 YISGRKLPDKAIDLMDEAAAQIRMELDSKPEVMDKIDRRLIQLQIERMALEKETDAASKR 440

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI   E +YA+LE+IW  EK   + + +IKE+++K+R+++  A R+ D+   S
Sbjct: 441 RLSDLEAEIAAQEKEYADLEEIWLAEKAGTQGAAEIKEQLDKLRVELEAAKRRGDFARAS 500

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG +   E+ L E  Q+  Q P+      L++ KV +EEIAEIVSR TGIPV+K+++
Sbjct: 501 EIQYGLIPAKEKQLLENEQQTEQRPHR-----LMRNKVTAEEIAEIVSRWTGIPVAKMME 555

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+E+LL++E +L +RVVGQ  A+ AV+NAIRR+R+GLSD KRP GSF+FLGPTGVGKTE
Sbjct: 556 GEKERLLHLETVLNERVVGQKTAVEAVANAIRRNRAGLSDPKRPIGSFLFLGPTGVGKTE 615

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LC+TL+  +F++EE+++RIDMSEF+EKHS++RLIGAPPGY+GY++GGYLTE VRRKPYS+
Sbjct: 616 LCRTLAQFLFDSEENMVRIDMSEFMEKHSVARLIGAPPGYVGYDQGGYLTEAVRRKPYSV 675

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L DE+EKA+SDVFN LLQ+LD+GRLTD +GRT++FR+T+I+MTSNLGSD I+ + +   
Sbjct: 676 VLFDEVEKAHSDVFNTLLQVLDEGRLTDGQGRTVDFRHTVIIMTSNLGSDMIQLLAEKSY 735

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AVM  V  +FRPEFINRID+ IVF  L + ++  IA IQL  L+ +L    + L 
Sbjct: 736 EEMKSAVMEIVMAHFRPEFINRIDEAIVFHGLAKTHMYRIAQIQLERLRQRLQTRELLLS 795

Query: 614 ISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQSL 673
           + + A+ ++  +G+D ++GAR +   K+++     + H ++P A  +  G  +   PQS 
Sbjct: 796 VEEDAINQLVELGYDPLFGARPL---KRAI-----QNHIENPLAQALLAGQYL---PQST 844

Query: 674 DTL 676
            T+
Sbjct: 845 ITI 847


>gi|238790743|ref|ZP_04634504.1| Chaperone protein clpB 1 [Yersinia frederiksenii ATCC 33641]
 gi|238721184|gb|EEQ12863.1| Chaperone protein clpB 1 [Yersinia frederiksenii ATCC 33641]
          Length = 857

 Score =  773 bits (1995), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/663 (57%), Positives = 516/663 (77%), Gaps = 17/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ E+ + E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ + +A R  D   +S
Sbjct: 440 RLEMLETELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +  +           LL+ +V   EIAE+++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAATALE------GKTMKLLRNRVTEAEIAEVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L KRV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEQDLHKRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   E+ 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERS 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E +K  VM+ V  +FRPEFINRID+++VF  L R ++ SIA IQL  L  +L +    
Sbjct: 734 YTE-MKNMVMDVVTHHFRPEFINRIDEVVVFHPLGRAHLASIARIQLERLYKRLEERGYQ 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           + I++ AL+ +   GFD +YGAR +   K+++   +     ++P +  I  G LI   P 
Sbjct: 793 VTITQPALEFLGETGFDPVYGARPL---KRAIQQEI-----ENPLSQQILSGKLIPGVPV 844

Query: 672 SLD 674
           +LD
Sbjct: 845 TLD 847


>gi|428784253|ref|ZP_19001745.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
           amylovora ACW56400]
 gi|426277392|gb|EKV55118.1| ATP-dependent Clp protease, ATP-binding subunit ClpB [Erwinia
           amylovora ACW56400]
          Length = 836

 Score =  773 bits (1995), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/625 (58%), Positives = 498/625 (79%), Gaps = 13/625 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 179 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 238

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 239 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 298

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 299 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 358

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S K
Sbjct: 359 YIADRQLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKLEQQALKKESDDASIK 418

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ E+ + E +Y+ LE+ WK EK  +  +Q IK E+E+ +L + +A R+ D   +S
Sbjct: 419 RLEMLEGELGQKESEYSELEEEWKAEKASLSGTQHIKAELEQAKLNMEQARRQGDLGQMS 478

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L   +Q +           LL+ +V   EIA++++R TGIPV+++++
Sbjct: 479 ELQYGKIPDLEKQLAAATQSE------GKTMRLLRNRVTDVEIADVLARWTGIPVARMME 532

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQ EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 533 GERDKLLRMEQELHTRVIGQQEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 592

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 593 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 652

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE----ME 549
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E    + 
Sbjct: 653 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALN 712

Query: 550 KGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
            G+   +K  VM+ V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +  
Sbjct: 713 YGE---MKELVMSVVSQNFRPEFINRIDELVVFHPLGEEHIASIARIQLQRLYQRLEERG 769

Query: 610 MDLKISKAALKKISNIGFDLIYGAR 634
             L +S AAL+++   G+D +YGAR
Sbjct: 770 FTLHVSDAALQQLGENGYDPVYGAR 794


>gi|385787426|ref|YP_005818535.1| protein disaggregation chaperone [Erwinia sp. Ejp617]
 gi|310766698|gb|ADP11648.1| protein disaggregation chaperone [Erwinia sp. Ejp617]
          Length = 857

 Score =  771 bits (1992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/625 (58%), Positives = 498/625 (79%), Gaps = 13/625 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E DE+S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKLEQQALKKESDEASIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ E+++ E +Y+ LE+ WK EK  +  +Q IK ++E+ +L + +A R+ D   +S
Sbjct: 440 RLKMLEGELSQKESEYSELEEEWKAEKASLSGTQHIKAQLEQAKLNMEQARRQGDLGQMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L   +Q +           LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGKIPDLEKQLAAATQSE------GKTMRLLRNRVTDVEIADVLARWTGIPVARMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQ EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEQQLHTRVIGQHEAVEAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE----ME 549
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E    + 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALS 733

Query: 550 KGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
            G+   +K  VM+ V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +  
Sbjct: 734 YGE---MKELVMSVVSQNFRPEFINRIDELVVFHPLGERHIASIARIQLQRLYQRLEERG 790

Query: 610 MDLKISKAALKKISNIGFDLIYGAR 634
             L +S AAL+ +   G+D +YGAR
Sbjct: 791 FTLHVSDAALQLLGENGYDPVYGAR 815


>gi|292900313|ref|YP_003539682.1| chaperone ClpB [Erwinia amylovora ATCC 49946]
 gi|291200161|emb|CBJ47287.1| chaperone ClpB (heat shock protein) [Erwinia amylovora ATCC 49946]
          Length = 857

 Score =  771 bits (1992), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 366/625 (58%), Positives = 498/625 (79%), Gaps = 13/625 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+K+E D++S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRMQIDSKPESLDRLERRIIQLKLEQQALKKESDDASIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL +++ E+ + E +Y+ LE+ WK EK  +  +Q IK E+E+ +L + +A R+ D   +S
Sbjct: 440 RLEMLEGELGQKESEYSELEEEWKAEKASLSGTQHIKAELEQAKLNMEQARRQGDLGQMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L   +Q      +      LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGKIPDLEKQLAAATQ------SEGKTMRLLRNRVTDVEIADVLARWTGIPVARMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQ EA+ AVS+AIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEQELHTRVIGQQEAVEAVSDAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE----ME 549
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E    + 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGALN 733

Query: 550 KGDKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
            G+   +K  VM+ V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +  
Sbjct: 734 YGE---MKELVMSVVSQNFRPEFINRIDELVVFHPLGEEHIASIARIQLQRLYQRLEERG 790

Query: 610 MDLKISKAALKKISNIGFDLIYGAR 634
             L +S AAL+++   G+D +YGAR
Sbjct: 791 FTLHVSDAALQQLGENGYDPVYGAR 815


>gi|445066521|gb|AGE14100.1| ATPase AAA-2 [uncultured prokaryote]
          Length = 594

 Score =  771 bits (1991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/555 (63%), Positives = 463/555 (83%), Gaps = 4/555 (0%)

Query: 80  ISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEK 139
           ++ ++   I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EYR+Y+EK
Sbjct: 1   MAQDEGQTIVFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEYRKYVEK 60

Query: 140 DAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRF 199
           DAA ERRFQK+LV EP +E+TI+ILRGLQ+KYE+HHGV+ITDPAIVAA+ELS RYI+DRF
Sbjct: 61  DAALERRFQKVLVGEPTVEDTIAILRGLQEKYELHHGVDITDPAIVAAAELSQRYITDRF 120

Query: 200 MPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIK 259
           +PDKAIDLIDEAAA++K+EIDSKPE MDKL RRLIQLKIE EA++RE DE+S+KRL L++
Sbjct: 121 LPDKAIDLIDEAAARLKMEIDSKPEAMDKLFRRLIQLKIEREAVRRETDEASQKRLALLE 180

Query: 260 KEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGE 319
           +EI+KLE +YA+LE++WK EK  ++ SQ +KE +++ R ++  A R+ D Q  S+LKY  
Sbjct: 181 EEIHKLEQEYADLEEVWKAEKAQVQGSQHVKEALDRARAEMETAQRQGDLQKASELKYAR 240

Query: 320 LNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKL 379
           + +LE  L++ ++             LL+T+VG+EEIAE+VSR TGIPVSK++Q EREKL
Sbjct: 241 IPQLEAQLRQTTETS----GKPQPLRLLRTQVGAEEIAEVVSRATGIPVSKMMQGEREKL 296

Query: 380 LNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLS 439
           L++E+ L +RVVGQDEA+  VS+AIRRSRSGLSD  RPYGSF+FLGPTGVGKTELCKTL+
Sbjct: 297 LHMEDYLHQRVVGQDEAVRLVSDAIRRSRSGLSDPNRPYGSFLFLGPTGVGKTELCKTLA 356

Query: 440 ACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEI 499
             +F++E+ +IRIDMSE++EKHS++RL+GAPPGY+G+EEGGYLTE VRRKPY++ILLDE+
Sbjct: 357 NFLFDSEDHLIRIDMSEYMEKHSVARLLGAPPGYVGFEEGGYLTEAVRRKPYAVILLDEV 416

Query: 500 EKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDKEIIKLA 559
           EKA+ DVFN+LLQ+LDDGR+TD +GRT++FRNT++VMTSNLGS  I++M + D+ +IKLA
Sbjct: 417 EKAHPDVFNVLLQVLDDGRMTDGQGRTVDFRNTVVVMTSNLGSQMIQQMAEDDQAVIKLA 476

Query: 560 VMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAAL 619
           VM EVK +FRPEF+NRID+I+VF  L    + SIA IQ+  L  +L KM + L++S  AL
Sbjct: 477 VMAEVKTHFRPEFVNRIDEIVVFHALGEAQVRSIARIQMAQLIRRLEKMELTLEVSDTAL 536

Query: 620 KKISNIGFDLIYGAR 634
            +++ +GFD +YGAR
Sbjct: 537 DQLAAVGFDPVYGAR 551


>gi|85058562|ref|YP_454264.1| protein disaggregation chaperone [Sodalis glossinidius str.
           'morsitans']
 gi|84779082|dbj|BAE73859.1| heat shock protein [Sodalis glossinidius str. 'morsitans']
          Length = 864

 Score =  771 bits (1991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/622 (58%), Positives = 496/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L + ++L LD+  L+AG+KYRGEFE+RL
Sbjct: 207 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNNRVLSLDMGSLVAGSKYRGEFEERL 266

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 267 KGVLSDLSKKEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 326

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R++IEKDAA ERRFQK+ V EP++E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 327 RKFIEKDAALERRFQKVFVAEPNVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 386

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+K+E D++S K
Sbjct: 387 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALKKESDDASLK 446

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E  Y+ LE+ WK EK  +  +Q +K E+E+ ++ I +A R  D   +S
Sbjct: 447 RLAMLNDELAQKERDYSELEEEWKAEKASLSGTQHLKAELEQAKISIEQARRVGDLARMS 506

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   SQ +           LL+ +V   EIAE+++R TGIPVS++++
Sbjct: 507 ELQYGKIPELEKQLAVASQAE------GKSMRLLRNRVTDIEIAEVLARWTGIPVSRMLE 560

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER KLL +E  L +RV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSFMFLGPTGVGKTE
Sbjct: 561 SERAKLLRMEQDLHQRVIGQNEAVEAVSNAIRRSRAGLADPNRPIGSFMFLGPTGVGKTE 620

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L   +F+++++++ IDMSEF+EKHS+S+L+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 621 LCKALGTFLFDSDDAMVCIDMSEFMEKHSVSQLVGAPPGYVGYEEGGYLTEAVRRRPYSV 680

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + +
Sbjct: 681 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDVIQERFGQMN 740

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  V++ V+ +FRPEFINR+D+++VF  L+R++I  IA IQL  +  +L +     
Sbjct: 741 YQEMKDMVLDVVRHHFRPEFINRVDEVVVFHPLSREHITEIAQIQLQRMYQRLEERGYTT 800

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS  AL  +   GFD +YGAR
Sbjct: 801 TISDEALALLGKSGFDPVYGAR 822


>gi|430376469|ref|ZP_19430872.1| ATPase [Moraxella macacae 0408225]
 gi|429541700|gb|ELA09728.1| ATPase [Moraxella macacae 0408225]
          Length = 860

 Score =  771 bits (1991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/623 (57%), Positives = 502/623 (80%), Gaps = 6/623 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQ+I+NG+VP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQKIVNGDVPEGLRNKRVLALDLGALIAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++ ++  I++FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 257 KAVLNDLAKSEGQIVLFIDEIHTMVGAGKSDGAMDAGNMLKPALARGELHCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LV+EP +E++I+ILRGL+++YE+HHGV+I D AI+AA+ +S+R
Sbjct: 317 RQFIEKDAALERRFQKVLVDEPTVEDSIAILRGLKERYELHHGVDIQDSAIIAAARMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+++K+E+DSKPE + KL+ RLI LK++ EA+K E D+ +  
Sbjct: 377 YITDRKLPDKAIDLIDEAASRLKMELDSKPEALGKLDSRLIGLKMQREALKNETDDGAIA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           +  L+  +I  LE +YA+L  IW+ EK L+K SQ +K+E++K R+   KA+R++D++T+S
Sbjct: 437 QRNLLHDQIADLEKQYADLNDIWQAEKALVKGSQVLKDELDKARIAYEKASRENDYETMS 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           KL+Y  +  LE+ L   ++ D+   + ++   LL+ KV   EIAE+VS +TGIPV+K++Q
Sbjct: 497 KLQYETIPDLEKRL---AKSDLAQRSGSDT-KLLRNKVTDNEIAEVVSASTGIPVAKMMQ 552

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREK+L +E+ L +RVVGQ EA++AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 553 GEREKMLAMEDKLHERVVGQTEAVTAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 612

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K+L+  +F++E ++IRIDMSEF+EKHS+SRL+GAPPGYIGYEEGG LTE VRRKPYS+
Sbjct: 613 LTKSLANFLFDDENAMIRIDMSEFMEKHSVSRLVGAPPGYIGYEEGGVLTEAVRRKPYSV 672

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L DE+EKA+ DVFNILLQ+LDDGR+TD++GR ++F+NT+I+MTSNLGS KI+EM    +
Sbjct: 673 VLFDEVEKAHPDVFNILLQVLDDGRMTDSQGRVVDFKNTVIIMTSNLGSHKIQEMTNDGE 732

Query: 554 --EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             + IK  VM  V  +FRPEFINRID+I+VF  L + ++  IA IQL  LK +L +  M 
Sbjct: 733 NYDNIKSTVMESVNTHFRPEFINRIDEIVVFHPLGQADMTGIAKIQLARLKQRLKEREMG 792

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L+++  A+  +  +G+D I+GAR
Sbjct: 793 LELTDNAMNTLIAVGYDPIFGAR 815


>gi|269468202|gb|EEZ79895.1| ATP-dependent Clp protease ATP-binding subunit ClpB [uncultured
           SUP05 cluster bacterium]
          Length = 852

 Score =  771 bits (1991), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/656 (56%), Positives = 510/656 (77%), Gaps = 16/656 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  +  K++L LD+A L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGIKGKRVLSLDMAALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK++   Q  +I+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 260 KAVLKDLEAEQGQVILFIDELHTMVGAGKSDGAMDAGNMLKPALARGDLHCMGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD+A ERRFQK+LV+EP  E+T++ILRGL++KYEVHHGVEITDPAI+AA   S R
Sbjct: 320 RQYIEKDSALERRFQKVLVDEPTEEDTVAILRGLKEKYEVHHGVEITDPAIIAAVTYSTR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE MDKL+R+L+QLKIE  A+K+E D++SK+
Sbjct: 380 YITDRQLPDKAIDLIDEAASQIRMEIDSKPESMDKLDRKLVQLKIERMALKKEKDKASKE 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R   ++  I KLE +Y +LE++WK EK++++ +Q +KEE+E+ ++ +  A R +D   +S
Sbjct: 440 RFKELENTIKKLEKEYGDLEEVWKKEKSIVQGAQHLKEELEQAKVDLESAHRNNDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE  + +    D          TLL+ KV  +EIA IV+R TGIPV K+++
Sbjct: 500 ELQYGVIPELEEKITQAENVD------GEDMTLLRNKVTEDEIAHIVARWTGIPVDKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +E ++ KR+VGQD+A+  +S+A+RRSR+GLSD  RP GSF+F+GPTGVGKTE
Sbjct: 554 GEKDKLLQMEEIIHKRLVGQDKAVKVISDAVRRSRAGLSDPNRPDGSFLFMGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ E++I+R+DMSEF+EKHS++RLIGAPPGY+GYE+GG LTE +RRKPYS+
Sbjct: 614 LTKALADFLFDTEQAIVRLDMSEFMEKHSVARLIGAPPGYVGYEQGGVLTEAIRRKPYSI 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGD- 552
           ILLDEIEKA+ DVFN+LLQ+LDDGRLTD +GRT++F+NT+IVMTSNLGS  I++    D 
Sbjct: 674 ILLDEIEKAHPDVFNVLLQVLDDGRLTDGQGRTVDFKNTVIVMTSNLGSHLIQDNPGKDI 733

Query: 553 -KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E+IKL     V  +FRPEF+NRID+I+VF  L +  I  IA +Q++ILK++L  +N+ 
Sbjct: 734 QSELIKL-----VGEHFRPEFVNRIDEIVVFNGLEKNQIKGIAVLQIDILKSRLEDLNLK 788

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 667
           L +S  A+  I + G+D ++GAR +   K+++  LL+    +   A     G  IN
Sbjct: 789 LNLSDVAMTLIVDRGYDPVFGARPL---KRTIQQLLENPLSQKILAGEFLPGSTIN 841


>gi|238785830|ref|ZP_04629799.1| Chaperone protein clpB 1 [Yersinia bercovieri ATCC 43970]
 gi|238713243|gb|EEQ05286.1| Chaperone protein clpB 1 [Yersinia bercovieri ATCC 43970]
          Length = 857

 Score =  771 bits (1990), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/663 (56%), Positives = 515/663 (77%), Gaps = 17/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKK
Sbjct: 380 YIADRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALKKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ + +A R  D   +S
Sbjct: 440 RLEMLNTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +  +           LL+ +V   EIA++++R TGIPV+++++
Sbjct: 500 ELQYGKIPELEKQLAAATALE------GKTMKLLRNRVTEVEIADVLARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L KRV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEQDLHKRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   E+ 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERS 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E +K  VM  V  +FRPEFINRID+++VF  L R ++ SIA+IQL  L  +L +    
Sbjct: 734 YAE-MKNMVMEVVSHHFRPEFINRIDEVVVFHPLGRAHLASIASIQLERLYKRLEERGYQ 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           + I++ AL+ +   GFD +YGAR +   K+++   +     ++P +  I  G LI   P 
Sbjct: 793 VTITQPALEFLGEAGFDPVYGARPL---KRAIQQEI-----ENPLSQQILSGKLIPGVPV 844

Query: 672 SLD 674
           +LD
Sbjct: 845 TLD 847


>gi|284007736|emb|CBA73548.1| protein disaggregation chaperone [Arsenophonus nasoniae]
          Length = 863

 Score =  770 bits (1989), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/623 (60%), Positives = 503/623 (80%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 206 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALLAGAKYRGEFEERL 265

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  + ++I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 266 KAVLNDLAKQEGNVILFIDELHTMVGAGKTEGAMDAGNMLKPALARGELHCVGATTLDEY 325

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS R
Sbjct: 326 RQYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAASLSNR 385

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E DE+SKK
Sbjct: 386 YISDRMLPDKAIDLIDEAGASLRMQMDSKPEALDRLERRVIQLKLEQQALKKESDEASKK 445

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++++E+ + E +Y+ LE+ WK EK  +  +Q IK E+E  R+ + +A R  D   +S
Sbjct: 446 RLKMLEEELTEKEREYSELEEEWKAEKAELTGTQHIKAELENARISLEQARRSGDLAKMS 505

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  ++ +      +    LL+ KV   EIAEI++R TGIPVS++++
Sbjct: 506 ELQYGKIPELEKQLEAATKAE------SKTMKLLRNKVTDAEIAEILARWTGIPVSRMLE 559

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E  L KRV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 560 SEREKLLHMEQDLHKRVIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 619

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE +RR+PYS+
Sbjct: 620 LCKALANFLFDSDDAMVRIDMSEFMEKHTVSRLVGAPPGYVGYEEGGYLTEAIRRRPYSV 679

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     G
Sbjct: 680 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGSLG 739

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E +K  VM  V   FRPEFINRID+++VF  LN++ I  IA IQL+ L  ++ +    
Sbjct: 740 YNE-MKEIVMEVVSRSFRPEFINRIDEVVVFHPLNKEQITDIAQIQLSRLYKRMEEQGYK 798

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           +KI  AAL+K+S  GFD ++GAR
Sbjct: 799 VKIKPAALEKLSEAGFDPVFGAR 821


>gi|358013344|ref|ZP_09145154.1| ATP-dependent chaperone ClpB [Acinetobacter sp. P8-3-8]
          Length = 859

 Score =  770 bits (1988), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/654 (56%), Positives = 509/654 (77%), Gaps = 14/654 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL  K++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKGKRVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++    +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLKDLAKYDGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LV+EP +E+TI+ILRGL+ KY  HHGV+I D AI+AA+++S+R
Sbjct: 317 RQFIEKDAALERRFQKVLVDEPSVEDTIAILRGLKDKYATHHGVQILDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+EIDSKPE +D+L+RRLIQLK++ EA+K++ D  SK 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMEIDSKPEPLDRLDRRLIQLKMQLEAVKKDADSVSKA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++K+I +++ +Y++LE++W  EK L+  + Q + E++K R    KA R+ D    S
Sbjct: 437 EVAHLEKQIEEVQKEYSDLEEVWIAEKRLVDGTNQAQVELDKARTAFEKAQREGDLAEAS 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ L E+            +  L++TKV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 RLQYGIIPELQKRLNEEEVA-----ETNEEPKLIRTKVTENEIAEVVSAATGIPVTKMLQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E  L  RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GEREKLLHMEEFLHNRVVGQDEAVVAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR I+F+NT+IVMTSNLGS+ ++E+ +G  
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVIDFKNTVIVMTSNLGSNDVRELGEGAS 731

Query: 554 EI-IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
           +  ++  ++N V  +FRPEFINRID+++VF  L +  I  IA+IQL+ L+++L   ++ L
Sbjct: 732 DAEVRATILNAVSQHFRPEFINRIDELVVFHSLKKSQIRGIADIQLDRLRSRLNDRDIGL 791

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLI 666
           K+   A   + + GFD +YGAR +   K+++   +     ++P A  I  GD I
Sbjct: 792 KVDDQAFDILIDAGFDPVYGARPL---KRAIQQQI-----ENPLAQKILAGDFI 837


>gi|50084451|ref|YP_045961.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Acinetobacter sp. ADP1]
 gi|49530427|emb|CAG68139.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Acinetobacter sp. ADP1]
          Length = 859

 Score =  770 bits (1988), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/623 (57%), Positives = 502/623 (80%), Gaps = 8/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP SL +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPESLKNKRVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++     +I+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLNDLAKQDGQVILFIDELHTLVGAGKSDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YEVHHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYEVHHGVKILDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+E+DSKPE +D+LERR+IQLK++ EA+K++ D  SK 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMELDSKPEALDRLERRIIQLKMQLEAVKKDEDLGSKA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++++I+ ++ +Y ++E++W+ EK L++ ++  + ++++ R+   KA R+ D    +
Sbjct: 437 EVKHLEEQISIVQKEYNDMEEVWRAEKALVEGTKDAQVKLDQARIAFEKAQREGDLAEAA 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +L++ L+   Q ++   N   K  LL+ KV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 RLQYGVIPELQKQLE---QDEVAEENEEPK--LLRNKVTDNEIAEVVSAATGIPVAKMLQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L  RVVGQDEA+ AVSNA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 552 GEREKLLQMESFLHNRVVGQDEAVIAVSNAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++++++IRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSDDAMIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-- 551
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR I+F+NT+IVMTSNLGS  ++E+ +G  
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVIDFKNTVIVMTSNLGSQDVRELGEGAT 731

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D E ++  VM+ V  +FRPEFINRID+++VF  L +  I  IA+IQL+ L+++L + ++ 
Sbjct: 732 DDE-VRAVVMSAVSQHFRPEFINRIDELVVFHSLQKSQIRGIADIQLDRLRSRLAERDIG 790

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L I  +A   + + GFD +YGAR
Sbjct: 791 LNIDDSAFDILIDAGFDPVYGAR 813


>gi|304413392|ref|ZP_07394865.1| ClpB molecular chaperone [Candidatus Regiella insecticola LSR1]
 gi|304284235|gb|EFL92628.1| ClpB molecular chaperone [Candidatus Regiella insecticola LSR1]
          Length = 857

 Score =  769 bits (1986), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/623 (60%), Positives = 491/623 (78%), Gaps = 8/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLA RIINGEVP  L  K++L LDI  LLAG K+RGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLALRIINGEVPEGLKGKRVLSLDIGALLAGAKFRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMI-GTGKVEGSIDAGNMLKPELSRGELHCIGATTLNE 132
           K +L E+   + ++I+FIDELHT++ G GK +G++DAGNMLKP L+RGELHC+GATTLNE
Sbjct: 259 KALLNELEKQKGNVILFIDELHTLVVGAGKSDGAMDAGNMLKPALARGELHCVGATTLNE 318

Query: 133 YRQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSY 192
           YRQYIEKDAA ERRFQ + V EP++E+ I+ILRGL+++YE+HH V+ITDPAIV A  LS+
Sbjct: 319 YRQYIEKDAALERRFQTVYVAEPNVEDAIAILRGLKERYELHHHVQITDPAIVEAVTLSH 378

Query: 193 RYISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSK 252
           RYISDR +PDKAIDLIDEA + I+++IDSKPE++D+L RR+IQLK+E +A+ +E D++SK
Sbjct: 379 RYISDRRLPDKAIDLIDEAGSSIRMQIDSKPELLDRLYRRIIQLKLEQQALNKESDDASK 438

Query: 253 KRLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTV 312
           KRL  +  E+ + E +Y+ LE+ WK EK  +K  Q+IK E+E+ ++ + +A R  D   +
Sbjct: 439 KRLQELNSELEQKEREYSTLEEKWKAEKAALKGIQKIKTELEQAKITLEQARRVGDLTKM 498

Query: 313 SKLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIV 372
           S+L+YG++ +LE+ L   +Q    L N   K  LL  +V  EEIA++V+R TGIPVSK++
Sbjct: 499 SELQYGKIPELEKELDTANQ----LENETMK--LLPNRVTEEEIAKVVARWTGIPVSKML 552

Query: 373 QVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKT 432
           + ER KLL IE  L  RV+GQDEAI AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKT
Sbjct: 553 EGERSKLLRIEQELHNRVIGQDEAIEAVSNAIRRSRAGLADDNRPTGSFLFLGPTGVGKT 612

Query: 433 ELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYS 492
           ELCK L+  +FN ++++IRIDMSEF+EKH++SRLIGAPPGY+GYEEGGYLTEIVRR+PYS
Sbjct: 613 ELCKALAVFLFNTDKAMIRIDMSEFMEKHAVSRLIGAPPGYVGYEEGGYLTEIVRRRPYS 672

Query: 493 LILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KG 551
           +IL DE+EKA+ DVFNILLQ+LD+GRLTD +GRT++FRNT+++MTSNLGS+ I E   + 
Sbjct: 673 VILFDEVEKAHPDVFNILLQVLDEGRLTDGQGRTVDFRNTVVIMTSNLGSELILEHSTET 732

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D   IK  VM  V  +FRPEFINRID+IIVF  L + +++SIA IQL  L+ +L   N  
Sbjct: 733 DFSKIKNKVMENVSNHFRPEFINRIDEIIVFHRLEQHHLISIAKIQLQRLQQRLAGRNYQ 792

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           +  ++A L+ +S  GFD +YGAR
Sbjct: 793 INATEAVLELLSQRGFDPVYGAR 815


>gi|440730877|ref|ZP_20910938.1| ATP-dependent clp protease subunit protein [Xanthomonas translucens
           DAR61454]
 gi|440376400|gb|ELQ13074.1| ATP-dependent clp protease subunit protein [Xanthomonas translucens
           DAR61454]
          Length = 897

 Score =  769 bits (1986), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/625 (58%), Positives = 496/625 (79%), Gaps = 10/625 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NP+L GE GVGKTA+VEGLA+RI   +VP+ L   ++ +LD+ LL AG   +GEFE+RL
Sbjct: 236 NNPILTGEAGVGKTAVVEGLARRIAEKDVPDVLQGVELHVLDMGLLQAGASVKGEFENRL 295

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K ++ E+  +   II+FIDE HTMIG G   G  DA N+LKP L+RGELHCIGATTL+EY
Sbjct: 296 KNVIDEVKKSPHPIILFIDEAHTMIGAGGTAGQNDAANLLKPALARGELHCIGATTLDEY 355

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++Y VHHGVEITDPAIVAA+ LS R
Sbjct: 356 RKYIEKDAALERRFQKVFVGEPTVEDTIAILRGLKERYAVHHGVEITDPAIVAAATLSNR 415

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDL+DEAA++I++EIDSKPE +D+LERRLIQLKI+ E +K+E DE+S++
Sbjct: 416 YIADRQLPDKAIDLMDEAASRIRMEIDSKPEELDRLERRLIQLKIQREMLKKEKDEASRQ 475

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ +I+KL+ ++++L+++W+ EK  ++ + +IKE+IE+ R+++  A R+ D+  +S
Sbjct: 476 RLADLESDIDKLQREFSDLDEVWRSEKATLQGATRIKEQIEQARVELEAAQRRQDYAKMS 535

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG L  LE+ L      +       + FTL++ +V +EEIAE+VSR TGIPV+++++
Sbjct: 536 EIQYGLLPNLEKQLAAAGDAE------HHDFTLVQDRVTAEEIAEVVSRWTGIPVNRMLE 589

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E+ L +RVVGQ EAI  VS+A+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 590 GERDKLLRMEDELHRRVVGQQEAIKVVSDAVRRSRAGLSDPNRPSGSFLFLGPTGVGKTE 649

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++ E++IRIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL
Sbjct: 650 LCKALAEFLFDSSEAMIRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSL 709

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           ILLDE+EKA+SDVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS +I+E+   G 
Sbjct: 710 ILLDEVEKAHSDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSHQIQELSGDGS 769

Query: 553 KEI---IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMN 609
            E    +K AVM  V+ +FRPEF+NR+DDI+VF  L++  I SIA IQL  L  +L +  
Sbjct: 770 AEAYTQMKAAVMGVVQAHFRPEFVNRLDDIVVFHPLDKAQIKSIARIQLGGLDKRLAERG 829

Query: 610 MDLKISKAALKKISNIGFDLIYGAR 634
           + +++S  AL+ + N+GFD +YGAR
Sbjct: 830 LKIELSDRALELLGNVGFDPVYGAR 854


>gi|238791396|ref|ZP_04635035.1| Chaperone protein clpB 1 [Yersinia intermedia ATCC 29909]
 gi|238729529|gb|EEQ21044.1| Chaperone protein clpB 1 [Yersinia intermedia ATCC 29909]
          Length = 857

 Score =  769 bits (1985), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/663 (57%), Positives = 513/663 (77%), Gaps = 17/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKHKRVLSLDMGSLIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  +  +I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLSKQEGSVILFIDELHTMVGAGKGDGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I++++DSKPE +D+LERR+IQLK+E +A+ +E D++SKK
Sbjct: 380 YISDRQLPDKAIDLIDEAGSSIRMQMDSKPESLDRLERRIIQLKLEQQALNKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ + +A R  D   +S
Sbjct: 440 RLEMLNTELEQKEREYSELEEEWKAEKASLTGTQNIKTELEQAKITLEQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +  +           LL+ +V   EIA++++R TGIPVS++++
Sbjct: 500 ELQYGKIPELEKQLAAANALE------GKTMKLLRNRVTEVEIADVLARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L KRV+GQDEA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SERDKLLRMEQDLHKRVIGQDEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALATFLFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   E+ 
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGERS 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E +K  VM  V  +FRPEFINRID+++VF  L R ++ SIA+IQL  L  +L +    
Sbjct: 734 YTE-MKNMVMEVVSHHFRPEFINRIDEVVVFHPLGRAHLASIASIQLERLYKRLEERGYQ 792

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQ 671
           + I++ AL+ +   GFD +YGAR +   K+++   +     ++P A  I  G LI   P 
Sbjct: 793 VTITQPALEFLGETGFDPVYGARPL---KRAIQQEI-----ENPLAQQILSGKLIPGVPV 844

Query: 672 SLD 674
            LD
Sbjct: 845 ILD 847


>gi|297183638|gb|ADI19764.1| hypothetical protein [uncultured gamma proteobacterium EB000_37F04]
          Length = 863

 Score =  768 bits (1984), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/653 (57%), Positives = 517/653 (79%), Gaps = 17/653 (2%)

Query: 15  NPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLK 74
           NPVLIGEPGVGKTAI+EGLAQR++NGEVP+SL  K+IL LD+A LLAG K+RG+FE+RLK
Sbjct: 199 NPVLIGEPGVGKTAIIEGLAQRVVNGEVPDSLRDKRILALDLAALLAGAKFRGDFEERLK 258

Query: 75  KILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYR 134
            +L  +S  +  II+F+DELHTM+G GK EGS+DAGNMLKP L+RGELHC+GATTLNEYR
Sbjct: 259 AVLNALSKEEGRIILFVDELHTMVGAGKAEGSLDAGNMLKPALARGELHCVGATTLNEYR 318

Query: 135 QYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRY 194
           Q +EKDAA ERRFQK+LVEEP  E+TI+ILRGL+++YEVHH V+ITD AI+AA++LS RY
Sbjct: 319 QSVEKDAALERRFQKVLVEEPSEEDTIAILRGLKERYEVHHSVDITDSAIIAAAKLSQRY 378

Query: 195 ISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKR 254
           I+DR +PDKAIDLIDEAA++I++EIDSKPE MD+LERRLIQLKIE EA+K++   ++   
Sbjct: 379 ITDRQLPDKAIDLIDEAASRIRMEIDSKPESMDRLERRLIQLKIEREAVKKDETAAAGSE 438

Query: 255 LLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSK 314
           L  +  +I+ +E +YA+LE+IW  EK +++ + QI+  IE+ +L ++ A R  D   +S+
Sbjct: 439 LEQLTHQIDSIEREYADLEEIWLAEKAVVQGAAQIRSLIEQTKLDLDVARRAGDLTAMSE 498

Query: 315 LKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQV 374
           +++G L +LER L   S  +++ P      TLL+++V  EE+AE+VSR TGIP++K+++ 
Sbjct: 499 IQHGVLPELERQL--ISAANVEAPEP----TLLRSRVTDEEVAEVVSRWTGIPIAKMLEG 552

Query: 375 EREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTEL 434
           +REKLL +E  L  RVVGQ+EA++AVSNA+RR+R+GL+D +RP GSF+FLGPTGVGKTEL
Sbjct: 553 DREKLLRMETTLHDRVVGQNEAVTAVSNAVRRARAGLADPQRPNGSFLFLGPTGVGKTEL 612

Query: 435 CKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLI 494
           CK L+  +F+++++++RIDMSEF+E+HS++RLIGAPPGY+GYEEGGYLTE VRR+PYSL+
Sbjct: 613 CKALATYLFDSDQALVRIDMSEFMEQHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSLL 672

Query: 495 LLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK--GD 552
           LLDE+EKA+  VF++LLQ+L+DGRLTD +GRT++FRNT+IVMTSNLGS+ I +     G 
Sbjct: 673 LLDEVEKAHPKVFDVLLQVLEDGRLTDGQGRTVDFRNTVIVMTSNLGSELIHDAGTRLGY 732

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E I+ AVM  V  +FRPEF+NRID+ +VF  L +++I  IA IQL +L ++L + ++ L
Sbjct: 733 DE-IQAAVMARVSEHFRPEFLNRIDESVVFHSLEQEHIRDIATIQLEVLTDRLAERSLRL 791

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDL 665
            +S   ++ +S +GFD +YGAR +   K+++  L+     ++P A+ +  GD 
Sbjct: 792 AVSDDVMEHLSEVGFDPVYGARPL---KRAIQQLI-----ENPLAHALLAGDF 836


>gi|88811113|ref|ZP_01126369.1| ClpB protein [Nitrococcus mobilis Nb-231]
 gi|88791652|gb|EAR22763.1| ClpB protein [Nitrococcus mobilis Nb-231]
          Length = 866

 Score =  768 bits (1983), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/623 (60%), Positives = 509/623 (81%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+N EVP +L  +++L+LD+  L+AG K+RG+FE+RL
Sbjct: 201 NNPVLIGEPGVGKTAIVEGLAQRIVNAEVPGALKGRRLLVLDMGALVAGAKFRGDFEERL 260

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L++++  +  II+FIDE+H ++G G+ EGS+DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 261 KAVLRDLAKQEGQIILFIDEIHNIVGAGRAEGSMDAGNMLKPALARGELHCIGATTLDEY 320

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ VEEP IE+TI+ILRGL+++YEVHHGVEITDPAIVAA+ +S R
Sbjct: 321 RQYIEKDAALERRFQKVTVEEPTIEDTIAILRGLKERYEVHHGVEITDPAIVAAATMSQR 380

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI++R +PDKAIDLIDEAA++I+IEIDSKPE MD+LERRLIQLKIE EA+ +E DE+SKK
Sbjct: 381 YITERKLPDKAIDLIDEAASRIRIEIDSKPEAMDRLERRLIQLKIEREALAKEADEASKK 440

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +++EI ++E +Y +LE+IW  EK  ++ +  IKE +E+ R ++  A R  D   +S
Sbjct: 441 RLQTVEREIEEVERQYQDLEQIWDSEKAAVEGTHAIKESLEQARKELETARRAGDLTRMS 500

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LER L+  S+ ++Q         LL+ KV  EE+AE+VS+ TGIPVSK+++
Sbjct: 501 ELQYGRIPELERRLEVASEAEMQ------DMQLLRNKVTEEEVAEVVSKWTGIPVSKMLE 554

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ERE+LL++E  L  RV+GQ+EA++AV+NAIRRSR+GL+D KRP GSF+FLGPTGVGKTE
Sbjct: 555 GERERLLHMEQALQGRVIGQEEAVAAVANAIRRSRAGLADPKRPNGSFLFLGPTGVGKTE 614

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ EE+++RIDMSEF+EKH+++RLIGAPPGY+GYE+GGYLTE +RR+PY++
Sbjct: 615 LCKALATFLFDTEEAMVRIDMSEFMEKHAVARLIGAPPGYVGYEQGGYLTEAIRRRPYAV 674

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDE+EKA++DVFN+LLQ+LDDGRLTD+ GRT +FRN +IVMTSNLGS  I+EM  G++
Sbjct: 675 ILLDEVEKAHADVFNVLLQVLDDGRLTDSHGRTADFRNAVIVMTSNLGSQVIQEM-AGEE 733

Query: 554 --EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             + ++ AVM  V   FRPEFINRIDD++VF  L+R+ I  IA IQ+  +  +L + +M 
Sbjct: 734 NYQAMRQAVMEIVSQQFRPEFINRIDDVVVFHSLDREQIQRIAEIQIAYVDRRLREQDMG 793

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           +++++ AL+ ++  GFD +YGAR
Sbjct: 794 IELTQEALEMLAQAGFDPVYGAR 816


>gi|297172751|gb|ADI23717.1| hypothetical protein [uncultured Oceanospirillales bacterium
           HF4000_21D01]
          Length = 889

 Score =  768 bits (1982), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/627 (60%), Positives = 494/627 (78%), Gaps = 12/627 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L  KKIL LD+  L+AG K+RGEFE+RL
Sbjct: 216 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKGKKILSLDMGSLIAGAKFRGEFEERL 275

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK EG++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 276 KAVLNELSKQEGSIILFIDELHTMVGAGKAEGAMDAGNMLKPALARGDLHCVGATTLDEY 335

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LVEEP+ E+TI+ILRGL+++YEVHHGV+I+D AI+AA++LS R
Sbjct: 336 RQFIEKDAALERRFQKVLVEEPNEEDTIAILRGLKERYEVHHGVDISDSAIIAAAKLSQR 395

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I++EIDSKPE MD LERRLIQLKIE EA+K++ D  + K
Sbjct: 396 YITDRQLPDKAIDLIDEAASMIRMEIDSKPEEMDMLERRLIQLKIEQEALKKDEDPPALK 455

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R   + ++I +LE +YA+LE+IWK EK  ++ +Q I+  +EK R  +  A R  D   +S
Sbjct: 456 RKAKLAEDIQELEKEYADLEEIWKAEKASLQGTQIIRSSLEKARSDMELARRAGDLARMS 515

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG +  LE  L   +  +           LL+ +V  EEIA++VSR TGIPVSK+++
Sbjct: 516 EIQYGIIPGLEEKLTTAAAAEAAEKQ------LLRNRVTEEEIADVVSRATGIPVSKMLE 569

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ++ KLL++E  L +RV+GQ EA+ AV+NA+RRSRSGLSD  RP GSFMFLGPTGVGKTE
Sbjct: 570 EDKLKLLDMEAALHRRVIGQHEAVVAVANAVRRSRSGLSDPNRPNGSFMFLGPTGVGKTE 629

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ E++++RIDMSEF+E+HS++RLIGAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 630 LCKALAEFLFDTEDAMVRIDMSEFMERHSVARLIGAPPGYVGYEEGGYLTEAVRRRPYSV 689

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD  GRT++FRNT+IVMTSNLGSD+I+E ME G 
Sbjct: 690 LLLDEVEKAHPDVFNILLQVLDDGRLTDGHGRTVDFRNTVIVMTSNLGSDRIQELMETGA 749

Query: 553 K-----EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLK 607
                 E +K  V++ V  +F PEF+NRID+ +VF  L ++ I +IA IQL +L  +L+ 
Sbjct: 750 DDEESYEAVKKIVLDVVAKHFSPEFVNRIDETVVFHPLGKEQIRAIAEIQLELLNQRLVN 809

Query: 608 MNMDLKISKAALKKISNIGFDLIYGAR 634
             + LK+S A L  I++ G+D +YGAR
Sbjct: 810 NELALKVSDAVLDHIASTGYDPVYGAR 836


>gi|323143510|ref|ZP_08078190.1| ATP-dependent chaperone protein ClpB [Succinatimonas hippei YIT
           12066]
 gi|322416704|gb|EFY07358.1| ATP-dependent chaperone protein ClpB [Succinatimonas hippei YIT
           12066]
          Length = 864

 Score =  767 bits (1981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/663 (56%), Positives = 511/663 (77%), Gaps = 16/663 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRII GEVP  L +KK+L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIIKGEVPEGLRNKKVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK EGS+DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KGVLNELAKLEGKVILFIDEIHTMVGAGKSEGSMDAGNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS R
Sbjct: 320 RQYIEKDAALERRFQKVFVGEPSVENTIAILRGLKERYEIHHHVQITDPAIVAAATLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAAA I+++IDSKPE +D+L+R++IQLK+E +A+ +E D++SKK
Sbjct: 380 YITDRQLPDKAIDLIDEAAASIRLQIDSKPEPLDRLDRKIIQLKMERQAVAKETDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  I +EI++ + +Y+ L++IWK EK  ++ +QQIK +++  R + + A R+ D   +S
Sbjct: 440 RLQAIDEEIDESQKEYSRLDEIWKKEKLSLEGTQQIKVKLDAARHEFDVAKRQGDLSRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ +KE      +       F LLK KV   EIAE+VS+ TGIPV+K+++
Sbjct: 500 ELQYGIIPSLEKQIKEAGDAPAE-----KSFQLLKNKVTDVEIAEVVSKATGIPVAKMLE 554

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER KLL++E+ L +RV+GQDEAI+A++N+IRRSR+GLSD  RP GSFMF+GPTGVGKTE
Sbjct: 555 GERAKLLHMEDNLHQRVIGQDEAINAIANSIRRSRAGLSDPNRPIGSFMFMGPTGVGKTE 614

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK ++  +F+ E++++RIDMSEF+EK S+SRL+GAPPGY+GYE+GGYLTE VRR+PYS+
Sbjct: 615 LCKAVAEFLFDTEKAMVRIDMSEFMEKFSVSRLVGAPPGYVGYEQGGYLTEAVRRRPYSV 674

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGS+ I+E E G K
Sbjct: 675 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSEMIQE-ETGKK 733

Query: 554 --EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             + IK  ++  ++ +F+PEF+NR+D+ +VF  L+   I  IA IQL  L  +L     +
Sbjct: 734 SYQEIKAQLLQILEKHFKPEFLNRVDETVVFHPLSHNEIKKIAKIQLEGLTKRLSAQGYE 793

Query: 612 LKISKAALKKISNIGFDLIYGARDVHGCKKSL-------SILLKKIHKKSP-EANFIFLG 663
           + +  A +  ++NIGFD ++GAR +    ++         IL  K+    P E NF   G
Sbjct: 794 VILPDALMDHVANIGFDPVFGARPLRRAIQNTIEDPLANMILSGKVKVGEPFELNFDASG 853

Query: 664 DLI 666
           +L+
Sbjct: 854 ELV 856


>gi|253990664|ref|YP_003042020.1| chaperone clpb [Photorhabdus asymbiotica]
 gi|253782114|emb|CAQ85278.1| chaperone clpb [Photorhabdus asymbiotica]
          Length = 857

 Score =  767 bits (1981), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 377/662 (56%), Positives = 517/662 (78%), Gaps = 15/662 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S  + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLSDLSKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVYVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D++SKK
Sbjct: 380 YISDRMLPDKAIDLIDEAGASLRMQMDSKPEALDRLERRVIQLKLERQALKKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ +E+   E +Y+ LE+ WK EK  +  +Q IK E+E  R+ + +A R  D   +S
Sbjct: 440 RLEMLNEELIVKEREYSELEEEWKAEKAELTGTQHIKAELENARISLEQARRSGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG++  LE+ L   +Q +           LL+ KV   EIAEI++R TGIPV+++++
Sbjct: 500 EIQYGKIPGLEKQLATATQAE------GKNMKLLRNKVTDTEIAEILARWTGIPVARMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +E  L KRV+GQ+EA+ AVSNAIRRSR+GL+D  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEKDKLLRMEQELHKRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALANFLFDSDDAMVRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           ILLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   G +
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDMIQERFGGLN 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V  +FRPEFINRID+++VF  L R+++ +IA+IQL  L  +L +    +
Sbjct: 734 YGEMKDMVMGIVSHHFRPEFINRIDEVVVFHPLGRRHLSAIADIQLQRLYKRLEERGYQV 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
            I++ AL+ ++  GFD +YGAR +   K+++   +     ++P A  I  G L+   P +
Sbjct: 794 AITQQALEMLAEAGFDPVYGARPL---KRAIQQEI-----ENPLAQKILSGQLLPGKPVT 845

Query: 673 LD 674
           LD
Sbjct: 846 LD 847


>gi|8575704|gb|AAF78058.1|AF263561_3 ClpB protease [secondary endosymbiont of Glycaspis brimblecombei]
          Length = 857

 Score =  767 bits (1980), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/623 (59%), Positives = 503/623 (80%), Gaps = 9/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KDVLNDLAKQEGSVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS R
Sbjct: 320 RQYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAASLSNR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA A +++++DSKPE +D+LERR+ QLK+E +A+K+E D++SKK
Sbjct: 380 YISDRMLPDKAIDLIDEAGASLRMQMDSKPEALDRLERRVTQLKLEQQALKKESDDASKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++++E+ + E +Y+ LE+ WK EK  +  +Q IK E+E  R+ + +A R  D   +S
Sbjct: 440 RLKMLEEELTEKEREYSELEEEWKAEKAELTGTQHIKAELENARISMEQARRSGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L+  ++ +      ++   LL+ KV   EIAEI++R TGIPVSK+++
Sbjct: 500 ELQYGKIPELEKQLEAATKAE------SHSMKLLRNKVTDAEIAEILARWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL++E  L KRV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 SEREKLLHMEQDLHKRVIGQNEAVDAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++RIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE +RR+PYS+
Sbjct: 614 LCKALANFLFDSDDAMVRIDMSEFMEKHTVSRLVGAPPGYVGYEEGGYLTEAIRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEM--EKG 551
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E     G
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGSLG 733

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E+ +L VM  V   FRPEFINRID+++VF  L+++ I  IA IQL+ L  ++ +    
Sbjct: 734 YDEMKEL-VMEVVSRSFRPEFINRIDEVVVFHPLDKEQITEIAQIQLSRLYKRMEEQGYK 792

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           +KI+ AAL+K+   GFD ++GAR
Sbjct: 793 VKITPAALEKLGEAGFDPVFGAR 815


>gi|319760324|ref|YP_004124262.1| chaperone protein ClpB [Candidatus Blochmannia vafer str. BVAF]
 gi|318039038|gb|ADV33588.1| chaperone protein ClpB [Candidatus Blochmannia vafer str. BVAF]
          Length = 862

 Score =  767 bits (1980), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 378/623 (60%), Positives = 496/623 (79%), Gaps = 8/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIG PGVGKTAIVEGLAQRIINGEVP+ L + +IL LDIA LLAGTKYRGEFE+R 
Sbjct: 201 NNPVLIGNPGVGKTAIVEGLAQRIINGEVPDGLKNSRILSLDIAALLAGTKYRGEFEERF 260

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           KK+L  + +   +II+FIDELH M+G GK +G++DA NM+KP+L+RGELHC+GATT +EY
Sbjct: 261 KKVLNSLVSKDSNIILFIDELHVMVGAGKTDGAMDASNMIKPKLARGELHCVGATTFDEY 320

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
            +YIEKDAA ERRFQKI + EP+I++TI+ILRGL+++YE+HH V ITDPAIVAA+ LS R
Sbjct: 321 SKYIEKDAALERRFQKIFIIEPNIKDTIAILRGLKERYELHHNVHITDPAIVAAATLSKR 380

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+I+IDSKPE +D+L+RR+IQLK+E +A+K+E D++SKK
Sbjct: 381 YISDRQLPDKAIDLIDEAASSIRIQIDSKPEDLDRLDRRIIQLKLEKQALKKESDKASKK 440

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++KKE+ + E  Y  LE  WK EK+ + D Q IK ++EK ++ + +A R  D   +S
Sbjct: 441 RLEILKKELMEQESAYLVLESEWKREKSSLSDIQNIKSDLEKAKIALEQARRFGDLDKMS 500

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L   +Q      +N  K  LL+  V   EIAE++S+ TGIP+S+I+ 
Sbjct: 501 ELQYGSIPSLEKKLLNATQ------SNNKKMRLLRNYVSETEIAEVLSKWTGIPISRILT 554

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+ KLLN+E +L + V+GQD+A+ +VSNAIRRSRSGLSD KRP GSFMFLGPTGVGKTE
Sbjct: 555 NEKCKLLNMEKILHQLVIGQDDAVQSVSNAIRRSRSGLSDPKRPIGSFMFLGPTGVGKTE 614

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+LS  +F+ + +++RIDMSEF+EKHS+S+L+GAPPGYIGYE GGYLTE VRR+PYS+
Sbjct: 615 LCKSLSYFLFDTDSAMVRIDMSEFMEKHSVSKLLGAPPGYIGYETGGYLTEAVRRRPYSI 674

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKI-KEMEKGD 552
           +LLDEIEKA+SD+FN+LLQ+LDDGRLTDN+GRTINF NT+++MTSNLGSD I K+ +  D
Sbjct: 675 VLLDEIEKAHSDIFNVLLQVLDDGRLTDNQGRTINFSNTVMIMTSNLGSDLIQKKFKSLD 734

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V+N V  YF+PEFINRID+I+VF  LN ++++ IANIQL  L ++L +     
Sbjct: 735 YFEMKTMVLNVVNQYFKPEFINRIDEIVVFHPLNIEHLIKIANIQLKELCHRLEEKGYPC 794

Query: 613 K-ISKAALKKISNIGFDLIYGAR 634
             I+K AL  +S IG+D +YGAR
Sbjct: 795 THITKEALLFLSKIGYDSVYGAR 817


>gi|304309993|ref|YP_003809591.1| Heat shock protein F84.1 [gamma proteobacterium HdN1]
 gi|301795726|emb|CBL43925.1| Heat shock protein F84.1 [gamma proteobacterium HdN1]
          Length = 857

 Score =  767 bits (1980), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 380/655 (58%), Positives = 518/655 (79%), Gaps = 10/655 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAI EGLAQRI+NGEVP  L +K++L LD+  LLAG K+RGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIAEGLAQRIVNGEVPEGLKNKRVLSLDMGSLLAGAKFRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDELHTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KSVLTELAKEEGAVILFIDELHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV++P +E+TI+ILRGL+++YEVHHGV+ITD AIV A++LS R
Sbjct: 320 RQYIEKDAALERRFQKVLVDQPSVEDTIAILRGLKERYEVHHGVDITDSAIVEAAKLSQR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++E+DSKPE +D+L+RRLIQ K+E EA+K+E DE+S+K
Sbjct: 380 YITDRQLPDKAIDLIDEAASRIRMEMDSKPEELDRLDRRLIQFKMEREALKKEDDEASRK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + ++I K E +YA+LE+IW  EK  ++ SQQIK E+E+ R+ ++ A R+ D   +S
Sbjct: 440 RLEKLNEDIAKNEREYADLEEIWNAEKAALQGSQQIKVELEQARIDMDGARRRGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L   +Q ++       +  LL+ +V  EE+AE+VS+ TGIPVSK+++
Sbjct: 500 ELQYGRIPELEKRLDMATQAEM------TEMKLLRNRVTEEEVAEVVSKWTGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E+ L KRVVGQ EAI AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEREKLLQMEDSLHKRVVGQHEAIVAVANAVRRSRAGLSDPHRPNGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ +++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LCKALAEFLFDTQDALVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTETVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEK-GD 552
           ILLDE+EKA+ DVFNILLQ+L+DGRLTD +GRT++F+NT++VMTSNLGSD I+ + +  D
Sbjct: 674 ILLDEVEKAHPDVFNILLQVLEDGRLTDGQGRTVDFKNTVVVMTSNLGSDMIQTLAREAD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              ++ AVM+ V  +FRPEFINRID+++VF  L    I  IA IQL  L+ +LL  ++ L
Sbjct: 734 YNSMRDAVMDVVGQHFRPEFINRIDEVVVFHPLADSQIRGIAEIQLANLRKRLLDRDLKL 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLIN 667
            +    + +I  +G+D ++GAR +   K+++  L++    +   A     GD+I+
Sbjct: 794 DLDAEVMNRIIEVGYDPVFGARPL---KRAIQRLIENPLAQDILAGRFMPGDVIH 845


>gi|94676876|ref|YP_588651.1| ATP-dependent chaperone protein ClpB [Baumannia cicadellinicola
           str. Hc (Homalodisca coagulata)]
 gi|94220026|gb|ABF14185.1| ATP-dependent chaperone protein ClpB [Baumannia cicadellinicola
           str. Hc (Homalodisca coagulata)]
          Length = 862

 Score =  766 bits (1978), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/622 (59%), Positives = 491/622 (78%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L + ++L LD+  L+AG+KYRGEFE+RL
Sbjct: 203 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNNRVLSLDMGALVAGSKYRGEFEERL 262

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  + +II+FIDELHTM+G GK +G++DAGNMLKP LSRGELHC+GATTLNEY
Sbjct: 263 KAVLNELSKLEGNIILFIDELHTMVGAGKADGAMDAGNMLKPALSRGELHCVGATTLNEY 322

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R +IEKDAA ERRFQK+ + EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS R
Sbjct: 323 RTFIEKDAALERRFQKVFIVEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAAMLSNR 382

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLK+E +A+++E D++S K
Sbjct: 383 YIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLERRMIQLKLEQQALQKELDDASLK 442

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++ KE+ + E  YA LEK W+ EK  +  +Q+IK E+E+ ++ + +A R  D   +S
Sbjct: 443 RLKILNKELAQKEHAYAKLEKEWQAEKVSLSGAQKIKSELEQTKIYLEQARRIGDLARMS 502

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L       + L +      LL+ +V   EI E+++R TGIPVS++++
Sbjct: 503 ELQYGKIPELEKKLA------VVLQSEGKNMRLLRNRVTEMEITEVLARWTGIPVSRMLE 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER K+L IE  L +RVVGQ+EA+ AVSNAIRRSR+G++D  RP GSFMFLGPTGVGKTE
Sbjct: 557 SERTKILRIEQYLHQRVVGQNEAVEAVSNAIRRSRAGIADPNRPIGSFMFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+A +F+++ +I+RIDMSEF+E+HS+SR++GAPPGYIGYEEGG LTE VRR+PYS+
Sbjct: 617 LCKALAAFVFDSDTAIVRIDMSEFMERHSVSRMVGAPPGYIGYEEGGSLTEAVRRRPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDEIEKA+ D+FN+LLQ+L+DGRLTD  GRT+NFRNTI++MTSNLGSD I E   + +
Sbjct: 677 ILLDEIEKAHIDIFNLLLQLLEDGRLTDGHGRTVNFRNTIVIMTSNLGSDVINERFHQIN 736

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  V++ V  +FRPEFINRID+I+VF  L  +++L IA IQL  L  +L +  + +
Sbjct: 737 YHDMKNIVVDVVCHHFRPEFINRIDEIVVFHPLGHEDMLKIAQIQLQRLSKRLEEQGISI 796

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            IS   L  +   GFD IYGAR
Sbjct: 797 TISDQVLTLLVKTGFDFIYGAR 818


>gi|388256844|ref|ZP_10134025.1| ClpB [Cellvibrio sp. BR]
 gi|387940544|gb|EIK47094.1| ClpB [Cellvibrio sp. BR]
          Length = 885

 Score =  766 bits (1978), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 379/645 (58%), Positives = 511/645 (79%), Gaps = 30/645 (4%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  LLAG K+RG+FE+RL
Sbjct: 201 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRLLSLDLGGLLAGAKFRGDFEERL 260

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K ++ E+S  +  +I+FIDE+HTM+G GK EG++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 261 KSVINELSKQEGRVILFIDEIHTMVGAGKAEGAMDAGNMLKPALARGELHCVGATTLDEY 320

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+ V+EP+  +TI+ILRGL+++YEVHHGV+ITD AI+AA++LS R
Sbjct: 321 RKYIEKDAALERRFQKVQVDEPNESDTIAILRGLKERYEVHHGVDITDSAIIAAAKLSQR 380

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE MD+LERRLIQ KIE EA++++ DE+SKK
Sbjct: 381 YITDRQLPDKAIDLIDEAASRIRMEIDSKPEEMDRLERRLIQFKIEREAVRKDEDEASKK 440

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + ++I+K E +  +LE+IW+ EK  ++ SQ+IK ++E+ RL++ +  RK D   +S
Sbjct: 441 RLAKLDQDIDKFERELNDLEEIWRAEKAALQGSQEIKSQLEQARLELEEKRRKGDLARMS 500

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L    Q ++       +  LL+ KV  EEIAE+VS+ TGIPVSK+++
Sbjct: 501 ELQYGIIPQLEKQLDMAGQAEMM------EMKLLRNKVTEEEIAEVVSKWTGIPVSKMLE 554

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L KRV+GQ EA+ AV+NA+RRSR+GLSDA RP GSF+FLGPTGVGKTE
Sbjct: 555 GERDKLLRMEEALHKRVIGQHEAVVAVANAVRRSRAGLSDANRPNGSFLFLGPTGVGKTE 614

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK+L+  +F+  ++++RIDMSEF+EKHS++RLIGAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 615 LCKSLAEFLFDTADAMVRIDMSEFMEKHSVARLIGAPPGYVGYEEGGYLTEAVRRKPYSV 674

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-- 551
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGSD+I+E+ +   
Sbjct: 675 LLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSDRIQELAEDRS 734

Query: 552 ------DKEI----------------IKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKN 589
                 D  +                +K AVM  V  +FRPEFINRID+++VF  L R+ 
Sbjct: 735 FDTVSFDTSVSEDMNNSLNNENRYNAMKDAVMEVVGSHFRPEFINRIDEVVVFHPLGREQ 794

Query: 590 ILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGFDLIYGAR 634
           I  IA+IQL +L+ +L +  + L++  A + K++N+GFD +YGAR
Sbjct: 795 IRGIADIQLELLRKRLGERELSLELDDAVMNKLANVGFDPVYGAR 839


>gi|440509763|ref|YP_007347199.1| Chaperone protein ClpB [Candidatus Blochmannia chromaiodes str.
           640]
 gi|440453976|gb|AGC03468.1| Chaperone protein ClpB [Candidatus Blochmannia chromaiodes str.
           640]
          Length = 858

 Score =  766 bits (1977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 375/623 (60%), Positives = 495/623 (79%), Gaps = 8/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIG+PGVGKTAIVEGLAQRIINGEVP  L   ++L LD+  LLAGTKYRGEFE+RL
Sbjct: 200 NNPVLIGQPGVGKTAIVEGLAQRIINGEVPEGLKHSRVLALDMGGLLAGTKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S    +II+FIDELHTM+G GK +G++DA NMLKP LSRGELHC+GATTL+EY
Sbjct: 260 KSVLSDVSKEDSNIILFIDELHTMVGAGKTDGAMDASNMLKPRLSRGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
            +YIEKDAA ERRFQKI V EP +E+TI+ILRGL+++YE+HH V ITDPAIVAA+ LS+R
Sbjct: 320 SKYIEKDAALERRFQKIFVSEPSVEDTIAILRGLKERYELHHNVHITDPAIVAAAILSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E D++S K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRIQIDSKPEELDRLERRIIQLKLEQQALKKESDDASMK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L+  E+ + E  Y NLEK WK EK  + ++Q IK ++E+ ++ I++A R  D   +S
Sbjct: 440 RLNLLTTELIQKEKNYINLEKEWKKEKVSLSNAQSIKSDLEQAKIAIDQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L         L +N  K  LL+ +V   EIA ++SR TGIPVS+++ 
Sbjct: 500 ELQYGKIPELEKKLS------TILQSNYKKIRLLRNRVTDIEIAAVLSRWTGIPVSRMLA 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL++E+ L + VVGQ EA+ A+S+AIRRSRSGLSD KRP GSFMFLGPTGVGKTE
Sbjct: 554 SEKDKLLDMEHSLHQLVVGQHEAVKAISHAIRRSRSGLSDLKRPIGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK LS  +F+  ++++RIDMSEF+EKHS+S+L+GAPPGYIGYE GGYLTE +RR+PYS+
Sbjct: 614 LCKALSIFLFDTNKAMVRIDMSEFMEKHSVSKLLGAPPGYIGYESGGYLTESIRRRPYSI 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKI-KEMEKGD 552
           ILLDEIEKA+S++FN+LLQ+LDDGRLTD  GRT++F NT+I+MTSNLGSD I K     D
Sbjct: 674 ILLDEIEKAHSEIFNVLLQVLDDGRLTDGHGRTVHFNNTVIIMTSNLGSDFIQKRFGIVD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNM-D 611
            + +K+AV+N V  +FRPEF+NRID+I+VF  L+ ++++ IA+IQL  L ++L +    +
Sbjct: 734 YQEVKVAVLNIVNQHFRPEFVNRIDEIVVFHPLSTEHLMKIASIQLQRLCDRLEEKGYPN 793

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
             I+ A L  +S IGFD +YGAR
Sbjct: 794 TNITNAVLVFLSKIGFDPVYGAR 816


>gi|418020213|ref|ZP_12659521.1| ATP-dependent chaperone ClpB [Candidatus Regiella insecticola
           R5.15]
 gi|347604417|gb|EGY29075.1| ATP-dependent chaperone ClpB [Candidatus Regiella insecticola
           R5.15]
          Length = 856

 Score =  766 bits (1977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/622 (59%), Positives = 491/622 (78%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLA RIINGEVP  L  K++L LDI  LLAG K+RGEFE+RL
Sbjct: 199 NNPVLIGEPGVGKTAIVEGLALRIINGEVPEGLKGKRVLSLDIGALLAGAKFRGEFEERL 258

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+   + ++I+FIDELHT++G GK +G++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 259 KALLSELEKQEGNVILFIDELHTLVGAGKSDGAMDAGNMLKPALARGKLHCVGATTLDEY 318

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQ + V EP+IE+ ++ILRGL+++YE+HH V+ITDPAIV A  LS+R
Sbjct: 319 RQYIEKDAALERRFQTVYVAEPNIEDAVAILRGLKERYELHHHVQITDPAIVEAVTLSHR 378

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA + I+++IDSKPE +D L RR+IQLK+E +A+ +E D++SKK
Sbjct: 379 YISDRRLPDKAIDLIDEAGSSIRMQIDSKPEPLDLLYRRIIQLKLEQQALNKESDDASKK 438

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +  E+ + E +Y+ LE+ WK EK  +K +Q+IK E+E+ ++ + +A R  D   +S
Sbjct: 439 RLQELNNELEQKEREYSTLEEEWKAEKAALKGTQKIKTELEQAKITLEQARRVGDLTKMS 498

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L   +    QL N   K  LL  +V  EEIA++V+R TGIPVSK+++
Sbjct: 499 ELQYGKIPELEKELDTAN----QLENKTMK--LLPNRVTEEEIAKVVARWTGIPVSKMLE 552

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER KLL IE  L  RV+GQDEAI AVSNAIRRSR+G++D  RP GSF+FLGPTGVGKTE
Sbjct: 553 GERSKLLRIEQELHNRVIGQDEAIEAVSNAIRRSRAGIADDNRPTGSFLFLGPTGVGKTE 612

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+ ++++IRIDMSEF+EKH++SRLIGAPPGY+GYEEGGYLTEIVRR+PYS+
Sbjct: 613 LCKALAVFLFDTDKAMIRIDMSEFMEKHTVSRLIGAPPGYVGYEEGGYLTEIVRRRPYSV 672

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGD 552
           ILLDE+EKA+ DVFNILLQ+LD+GRLTD +G+T++FRNT+I+MTSNLGS+ I+    + D
Sbjct: 673 ILLDEVEKAHPDVFNILLQVLDEGRLTDGQGKTVDFRNTVIIMTSNLGSELIQAHSTEVD 732

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              IK  VM  V  +FRPEFINRID+IIVF  L + +++SIA IQL  L+ +L + N  +
Sbjct: 733 FSKIKNKVMESVSNHFRPEFINRIDEIIVFHRLEQHHLISIAKIQLQRLQQRLAERNYQI 792

Query: 613 KISKAALKKISNIGFDLIYGAR 634
             ++A L  +S  GFD +YGAR
Sbjct: 793 SATEAVLDLLSQRGFDPVYGAR 814


>gi|399265|sp|P17422.2|CLPB_DICNO RecName: Full=Chaperone protein ClpB
          Length = 860

 Score =  766 bits (1977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/621 (59%), Positives = 502/621 (80%), Gaps = 5/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI +  VP SL  K++L LD+A LLAGTKYRGEFE+RL
Sbjct: 204 NNPVLIGEPGVGKTAIVEGLAQRIADRAVPESLKGKRLLSLDLAALLAGTKYRGEFEERL 263

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L EI+     II+FIDE+HTM+G GK EGS+DAGNMLKP L+RG+LHCIGATTL+EY
Sbjct: 264 KAVLDEITKADGQIILFIDEIHTMVGAGKSEGSLDAGNMLKPALARGDLHCIGATTLDEY 323

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQY+EKDAA ERRFQK++V+EP +E+TI+ILR LQ++YEVHHG+ ITDPA+VAA++LS+R
Sbjct: 324 RQYMEKDAALERRFQKVIVDEPSVEDTIAILRNLQERYEVHHGINITDPALVAAAQLSHR 383

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YIS R +PDKAIDL+DEAAA+I++E+DSKPE+MDK++RRLIQL+IE  A+++E D +SK+
Sbjct: 384 YISGRKLPDKAIDLMDEAAAQIRMELDSKPEVMDKIDRRLIQLQIERMALEKETDAASKR 443

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++ EI   E +YA+LE+IW  EK     + +IKE+++K+R+++  A R+ D+   S
Sbjct: 444 RLSDLEAEIAAQEKEYADLEEIWLAEKAGNAGAAEIKEQLDKLRVELEAAKRRGDFARAS 503

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG +   E+ L E  Q+  Q P+      L++ KV +EEIAEIVSR TGIPV+K+++
Sbjct: 504 EIQYGLIPAKEKQLLENEQQTEQRPHR-----LMRNKVTAEEIAEIVSRWTGIPVAKMME 558

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+E+LL++E +L +RVVGQ  A+ AV+NAIRR+R+GLSD KRP GSF+FLGPTGVGKTE
Sbjct: 559 GEKERLLHLETVLNERVVGQKTAVEAVANAIRRNRAGLSDPKRPIGSFLFLGPTGVGKTE 618

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LC+TL+  +F++EE+++RIDMSEF+EKHS++RLIGAPPGY+GY++GGYLTE VRRKPYS+
Sbjct: 619 LCRTLAQFLFDSEENMVRIDMSEFMEKHSVARLIGAPPGYVGYDQGGYLTEAVRRKPYSV 678

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L DE+EKA+SDVFN LLQ+LD+GRLTD +GRT++FR+T+I+MTSNLGSD I+ + +   
Sbjct: 679 VLFDEVEKAHSDVFNTLLQVLDEGRLTDGQGRTVDFRHTVIIMTSNLGSDMIQLLAEKSY 738

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E +K AVM  V  +FRPEFINRID+ IVF  L + ++  IA IQL  L+ +L    + L 
Sbjct: 739 EEMKSAVMEIVMAHFRPEFINRIDEAIVFHGLAKTHMYRIAQIQLERLRQRLQTRELLLS 798

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           + + A+ ++  +G+D ++GAR
Sbjct: 799 VEEDAINQLVELGYDPLFGAR 819


>gi|190150414|ref|YP_001968939.1| chaperone ClpB [Actinobacillus pleuropneumoniae serovar 7 str.
           AP76]
 gi|189915545|gb|ACE61797.1| chaperone ClpB [Actinobacillus pleuropneumoniae serovar 7 str.
           AP76]
          Length = 781

 Score =  766 bits (1977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/569 (61%), Positives = 479/569 (84%), Gaps = 4/569 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 198 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 257

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++  +  +I+FIDE+HTM+G GK +G++DAGN+LKP L+RGELHC+GATTL+EY
Sbjct: 258 KAVLNELAKEEGQVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEY 317

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 318 RQYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 377

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ +++EIDSKPE +DKLERR+IQLK+E +A+++E DE+S++
Sbjct: 378 YISDRQLPDKAIDLIDEAASSLRMEIDSKPEPLDKLERRIIQLKLERQALQKEEDEASRQ 437

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + +E+   E +Y+ LE++WK EK+ +  +Q IK E+E  R+++++A R+++++ +S
Sbjct: 438 RLAKLDEELTAREREYSELEEVWKAEKSALLGTQHIKTELENARIEMDQARRENNFEKMS 497

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++  LE+ L E  +++ +   N     LL+TKV  EEIAE++S+ TGIPVSK+++
Sbjct: 498 ELQYGKIPALEKQLAEAVKREEEGGEN----QLLRTKVTDEEIAEVLSKATGIPVSKMME 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+EKLL +E +L  RV+GQ+EA+ AV+NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GEKEKLLRMEEVLHSRVIGQNEAVEAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCKTL+  +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKTLANFLFDDPDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGS  I+E  + D 
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSHLIQENPELDY 733

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVF 582
             +K  VM+ V  +FRPEFINRID+ +VF
Sbjct: 734 AGMKEVVMSVVGQHFRPEFINRIDETVVF 762


>gi|418861151|ref|ZP_13415719.1| protein disaggregation chaperone, partial [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 19470]
 gi|392825185|gb|EJA80940.1| protein disaggregation chaperone, partial [Salmonella enterica
           subsp. enterica serovar Newport str. CVM 19470]
          Length = 649

 Score =  765 bits (1976), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/613 (59%), Positives = 489/613 (79%), Gaps = 7/613 (1%)

Query: 23  GVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISN 82
           GVGKTAIVEGLAQRIINGEVP  L  +++L LD+  L+AG KYRGEFE+RLK +L +++ 
Sbjct: 1   GVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAK 60

Query: 83  NQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAA 142
            + ++I+FIDELHTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EYRQYIEKDAA
Sbjct: 61  QEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAA 120

Query: 143 FERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPD 202
            ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+RYI+DR +PD
Sbjct: 121 LERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPD 180

Query: 203 KAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEI 262
           KAIDLIDEAA+ I+++IDSKPE +D+L+RR+IQLK+E +A+ +E DE+SKKRL ++ +E+
Sbjct: 181 KAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEEL 240

Query: 263 NKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNK 322
           +  E +Y+ LE+ WK EK  +  +Q IK E+E+ ++ I +A R  D   +S+L+YG++ +
Sbjct: 241 DDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPE 300

Query: 323 LERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNI 382
           LE+ L+  +Q      +      LL+ KV   EIAE+++R TGIPV+++++ EREKLL +
Sbjct: 301 LEKQLEAATQ------SEGKTMRLLRNKVTDAEIAEVLARWTGIPVARMLEGEREKLLRM 354

Query: 383 ENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACI 442
           E  L  RV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSF+FLGPTGVGKTELCK L+  +
Sbjct: 355 EQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFM 414

Query: 443 FNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKA 502
           F+++++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+ILLDE+EKA
Sbjct: 415 FDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKA 474

Query: 503 NSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGDKEIIKLAVM 561
           + DVFNILLQ+LDDGRLTD +GRT++FRNT+++MTSNLGSD I+E   + D   +K  V+
Sbjct: 475 HPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVL 534

Query: 562 NEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKK 621
             V   FRPEFINRID+++VF  L  ++I SIA IQL  L  +L +   ++ IS  ALK 
Sbjct: 535 GVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKL 594

Query: 622 ISNIGFDLIYGAR 634
           +S  G+D +YGAR
Sbjct: 595 LSANGYDPVYGAR 607


>gi|71891969|ref|YP_277699.1| ATP-dependent protease [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
 gi|71796075|gb|AAZ40826.1| ATP-dependent protease [Candidatus Blochmannia pennsylvanicus str.
           BPEN]
          Length = 858

 Score =  765 bits (1975), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/623 (60%), Positives = 494/623 (79%), Gaps = 8/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIG+PGVGKTAIVEGLAQRIINGEVP  L   +IL LD+  LLAGTKYRGEFE+RL
Sbjct: 200 NNPVLIGQPGVGKTAIVEGLAQRIINGEVPEGLKHSRILALDMGGLLAGTKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S    +II+FIDELHTM+G GK +G++DA NMLKP LSRGELHC+GATTL+EY
Sbjct: 260 KSVLSDVSKEDSNIILFIDELHTMVGAGKTDGAMDASNMLKPRLSRGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
            +YIEKDAA ERRFQKI V EP +E+TI+ILRGL+++YE+HH V ITDPAIVAA+ LS+R
Sbjct: 320 SKYIEKDAALERRFQKIFVSEPSVEDTIAILRGLKERYELHHNVHITDPAIVAAAILSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR+IQLK+E +A+K+E D++S K
Sbjct: 380 YISDRQLPDKAIDLIDEAASSIRIQIDSKPEELDRLERRIIQLKLEQQALKKESDDASMK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L+  E+ + E  Y NLEK WK EK  + ++Q IK ++E+ ++ I++A R  D   +S
Sbjct: 440 RLNLLTTELIQKEQNYINLEKEWKKEKVSLSNAQSIKSDLEQAKIAIDQARRVGDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG++ +LE+ L         L +N  K  LL+ +V   EIA ++SR TGIPVS+++ 
Sbjct: 500 ELQYGKIPELEKKLS------TILQSNYKKIRLLRNRVTDIEIAAVLSRWTGIPVSRMLA 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL++E+ L + VVGQ EA+ A+S+AIRRSRSGLSD KRP GSFMFLGPTGVGKTE
Sbjct: 554 SEKDKLLDMEHSLHQLVVGQHEAVKAISHAIRRSRSGLSDLKRPIGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK LS  +F+   +++RIDMSEF+EKHS+S+L+GAPPGYIGYE GGYLTE +RR+PYS+
Sbjct: 614 LCKALSIFLFDTNNAMVRIDMSEFMEKHSVSKLLGAPPGYIGYESGGYLTESIRRRPYSI 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKI-KEMEKGD 552
           ILLDEIEKA+S++FN+LLQ+LDDGRLTD  GRT++F NT+I+MTSNLGSD I K     D
Sbjct: 674 ILLDEIEKAHSEIFNVLLQVLDDGRLTDGHGRTVHFNNTVIIMTSNLGSDFIQKRFGIVD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNM-D 611
            + +K+AV+N V  +FRPEF+NRID+I+VF  L+ ++++ IA+IQL  L ++L +    +
Sbjct: 734 YQEVKVAVLNIVNQHFRPEFVNRIDEIVVFHPLSTEHLMKIASIQLQRLCDRLEEKGYPN 793

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
             I+ A L  +S IGFD +YGAR
Sbjct: 794 TNITNAVLVFLSKIGFDPVYGAR 816


>gi|290476239|ref|YP_003469139.1| ATP-dependent protease [Xenorhabdus bovienii SS-2004]
 gi|289175572|emb|CBJ82375.1| ATP-dependent protease, Hsp 100, part of multi-chaperone system
           with DnaK, DnaJ, and GrpE [Xenorhabdus bovienii SS-2004]
          Length = 860

 Score =  764 bits (1972), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/622 (59%), Positives = 501/622 (80%), Gaps = 4/622 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIIN EVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINAEVPEGLKNKRVLSLDMGALVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L +++  +  +I+FIDELHT++G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KGVLNDLAKQEGSVILFIDELHTVVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKDAA ERRFQK+ V EP +E+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RQYIEKDAALERRFQKVYVAEPTVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YISDR +PDKAIDLIDEA A +++++DSKPE +D+LERR+IQLK+E +A+K+E D+ SKK
Sbjct: 380 YISDRMLPDKAIDLIDEAGASLRMQMDSKPEALDRLERRVIQLKLEQQALKKESDDGSKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL ++  E+ + E +Y+ LE+ WK EK  +  +Q IK E+E  RL++ KA R  D   +S
Sbjct: 440 RLEMLNMELVEKEREYSELEEEWKAEKAELTGTQNIKAELENTRLELEKARRSGDLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +++YG++ +LE+ L   +         ++   LL+ KV   EIAEI++R TGIPVS++++
Sbjct: 500 EIQYGKIPELEKRLATAATAATA---ESHHMKLLRNKVTDAEIAEILARWTGIPVSRMLE 556

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL++E+ L KRV+GQ+EA+ AVSNAIRRSR+GLSD  RP GSFMFLGPTGVGKTE
Sbjct: 557 SEKDKLLSMEHELHKRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFMFLGPTGVGKTE 616

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+++++++R+DMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 617 LCKALANFLFDSDDAMVRLDMSEFMEKHTVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSV 676

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG-D 552
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSNLGSD I+E     D
Sbjct: 677 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVIIMTSNLGSDIIQERFGALD 736

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
              +K  VM  V  +FRPEFINR+D+++VF  L ++++ SIANIQL  L ++L +    +
Sbjct: 737 YTGMKDMVMEVVGHHFRPEFINRVDEVVVFHPLGKEHLTSIANIQLQRLYHRLEERGYQV 796

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            ++  AL+K+S+ GFD +YGAR
Sbjct: 797 TMTSTALEKLSDAGFDPVYGAR 818


>gi|407893750|ref|ZP_11152780.1| protein disaggregation chaperone [Diplorickettsia massiliensis 20B]
          Length = 648

 Score =  763 bits (1969), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 362/607 (59%), Positives = 494/607 (81%), Gaps = 7/607 (1%)

Query: 29  IVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRLKKILKEISNNQKDII 88
           +VEGLAQRI+N EVP  L +K++L LD+  L+AG KYRGEFE+RLK +L +++  +  II
Sbjct: 1   MVEGLAQRIVNREVPEGLKNKRLLALDMGALIAGAKYRGEFEERLKAVLNDLAKQEGQII 60

Query: 89  IFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEYRQYIEKDAAFERRFQ 148
           +FIDELHTM+G GK EG++DAGNMLKP L+RG+LHCIGATTLNEYRQY+EKDAA ERRFQ
Sbjct: 61  LFIDELHTMVGAGKAEGAMDAGNMLKPALARGQLHCIGATTLNEYRQYVEKDAALERRFQ 120

Query: 149 KILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYRYISDRFMPDKAIDLI 208
           KILVEEP++E+T++ILRGL+++YE+HHGV+ITD AI+AA+ LS+RYI+DR +PDKAIDLI
Sbjct: 121 KILVEEPNVEDTVAILRGLKQRYEIHHGVDITDSAILAAASLSHRYIADRKLPDKAIDLI 180

Query: 209 DEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKKRLLLIKKEINKLEIK 268
           DEAA++I+IEIDSKPE +D+L+RRLIQLK+E +A+K+E DE+S+KR   +++EI++LE +
Sbjct: 181 DEAASRIRIEIDSKPEALDRLDRRLIQLKMERQALKKETDEASQKRRQTLEEEISQLEKE 240

Query: 269 YANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVSKLKYGELNKLERILK 328
           YA+L +IWK EK  ++  Q+IK ++E+ + ++ KA R  D   +S+L+YG + KLE+ L+
Sbjct: 241 YADLNEIWKAEKATLQGEQKIKSDLEQAQFELEKARRSGDLNKMSELQYGTIPKLEKQLQ 300

Query: 329 EKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQVEREKLLNIENLLCK 388
              Q + Q  +      L++ KV  +EIAEIVS+ TGIPVSK+++ ER+KLLN+E  +  
Sbjct: 301 AVQQAEQQETH------LVRNKVTEKEIAEIVSKWTGIPVSKMLEGERKKLLNMEAEIHG 354

Query: 389 RVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTELCKTLSACIFNNEES 448
           RV+GQDEAI+ V+NAIRRSR+GLSD  RP GSF+F GPTGVGKTE+CK L+  +F++E +
Sbjct: 355 RVIGQDEAIAVVANAIRRSRAGLSDPARPIGSFIFSGPTGVGKTEVCKALAHFLFDSESA 414

Query: 449 IIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSLILLDEIEKANSDVFN 508
           ++R+DMSEF+EKHS++RLIGAPPGY+GYE+GGYLTE VRRKPYS++LLDEIEKA+ DVFN
Sbjct: 415 MVRLDMSEFMEKHSVARLIGAPPGYVGYEQGGYLTEAVRRKPYSVVLLDEIEKAHPDVFN 474

Query: 509 ILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEME-KGDKEIIKLAVMNEVKIY 567
           ILLQ+LDDGRLTD +GRT++FRNT+IVMTSNLGS  I+E+  K D   +K  VM  +  +
Sbjct: 475 ILLQVLDDGRLTDGQGRTVDFRNTVIVMTSNLGSQLIQELAPKEDYTTLKNTVMEVIAQH 534

Query: 568 FRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLKISKAALKKISNIGF 627
           FRPEFINR+D+++VF  L    I  IA+IQL  L+ +L +  + L++S+AAL +++ +G+
Sbjct: 535 FRPEFINRVDEVVVFHALTSTQIHKIASIQLEQLRKRLSEREIALEVSQAALNELAMLGY 594

Query: 628 DLIYGAR 634
           D +YGAR
Sbjct: 595 DPVYGAR 601


>gi|416247887|ref|ZP_11635979.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis BC8]
 gi|326568746|gb|EGE18816.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis BC8]
          Length = 858

 Score =  760 bits (1962), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/621 (58%), Positives = 496/621 (79%), Gaps = 5/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGE GVGKTAIVEGLAQRI+NGEVP SL +K +L LD+  L+AG KY GEFE+RL
Sbjct: 197 NNPVLIGEAGVGKTAIVEGLAQRIVNGEVPESLRNKSVLSLDMGSLIAGAKYHGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++    +II+FIDELHTM+G GK  G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLNELAKQDGNIILFIDELHTMVGAGKTSGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVKIMDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+E+DSKPE +DKL+RR+IQLK++ EA+K E D  +K 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMELDSKPESLDKLDRRIIQLKMQLEAVKNEEDAGAKS 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           ++  ++++I+  + +Y+ LE++WK EK  ++ S+Q++ +++  R+ + KA R+ D+   S
Sbjct: 437 QVKSLEQQIDDAQKQYSELEEVWKAEKVGVEKSKQLQAKLDTARITLEKALREGDYARAS 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGE+  LE+ L E+   +   P +A K  LL+ KV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 QLQYGEIIALEKQLAEEQTDE---PEHAPK--LLRNKVTDNEIAEVVSHATGIPVAKMLQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER KLL +E++L +RV+GQ+EA++AV+NA+RRSRSGLSD  +P GSF+FLGPTGVGKTE
Sbjct: 552 GERNKLLAMEDVLHERVIGQNEAVAAVANAVRRSRSGLSDPNKPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E++++RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSEDAMVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR +NF+NT+I+MTSNLGS  I EM     
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVNFKNTVIIMTSNLGSHAIHEMTDSPY 731

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AVM  V  +FRPEFINRID+I+VF  L    +  IA IQL+ L+ +L +  + L 
Sbjct: 732 EDIKTAVMTSVTGHFRPEFINRIDEIVVFHGLGADQMTGIAEIQLDRLRTRLKERELGLS 791

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+  + ++G+D ++GAR
Sbjct: 792 VSDEAMNHLVSVGYDPVFGAR 812


>gi|416218528|ref|ZP_11624942.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 7169]
 gi|326559576|gb|EGE09990.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 7169]
          Length = 858

 Score =  760 bits (1962), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/621 (58%), Positives = 496/621 (79%), Gaps = 5/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGE GVGKTAIVEGLAQRI+NGEVP SL +K +L LD+  L+AG KY GEFE+RL
Sbjct: 197 NNPVLIGEAGVGKTAIVEGLAQRIVNGEVPESLRNKSVLSLDMGSLIAGAKYHGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++    +II+FIDELHTM+G GK  G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLNELAKQDGNIILFIDELHTMVGAGKTSGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVKIMDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+E+DSKPE +DKL+RR+IQLK++ EA+K E D  +K 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMELDSKPESLDKLDRRIIQLKMQLEAVKNEEDAGAKS 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           ++  ++++I+  + +Y+ LE++WK EK  ++ S+Q++ +++  R+ + KA R+ D+   S
Sbjct: 437 QVKSLEQQIDDAQKQYSELEEVWKAEKVGVEKSKQLQAKLDTARITLEKALREGDYARAS 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGE+  LE+ L E+   +   P +A K  LL+ KV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 QLQYGEIIALEKQLAEEQTDE---PEHAPK--LLRNKVTDNEIAEVVSHATGIPVAKMLQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER KLL +E++L +RV+GQ+EA++AV+NA+RRSRSGLSD  +P GSF+FLGPTGVGKTE
Sbjct: 552 GERNKLLAMEDVLHERVIGQNEAVAAVANAVRRSRSGLSDPNKPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E++++RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSEDAMVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR +NF+NT+I+MTSNLGS  I EM     
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVNFKNTVIIMTSNLGSHAIHEMTDSSY 731

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AVM  V  +FRPEFINRID+I+VF  L    +  IA IQL+ L+ +L +  + L 
Sbjct: 732 EDIKTAVMASVTGHFRPEFINRIDEIVVFHGLGADQMTGIAEIQLDRLRTRLKERELGLS 791

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+  + ++G+D ++GAR
Sbjct: 792 VSDEAMNHLVSVGYDPVFGAR 812


>gi|416243668|ref|ZP_11634003.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis BC7]
 gi|326568620|gb|EGE18691.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis BC7]
          Length = 858

 Score =  760 bits (1962), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/621 (58%), Positives = 496/621 (79%), Gaps = 5/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGE GVGKTAIVEGLAQRI+NGEVP SL +K +L LD+  L+AG KY GEFE+RL
Sbjct: 197 NNPVLIGEAGVGKTAIVEGLAQRIVNGEVPESLRNKSVLSLDMGSLIAGAKYHGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++    +II+FIDELHTM+G GK  G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLNELAKQDGNIILFIDELHTMVGAGKTSGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVKIMDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+E+DSKPE +DKL+RR+IQLK++ EA+K E D  +K 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMELDSKPESLDKLDRRIIQLKMQLEAVKNEEDAGAKS 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           ++  ++++I+  + +Y+ LE++WK EK  ++ S+Q++ +++  R+ + KA R+ D+   S
Sbjct: 437 QVKSLEQQIDDAQKQYSELEEVWKAEKVGVEKSKQLQAKLDTARITLEKALREGDYARAS 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGE+  LE+ L E+   +   P +A K  LL+ KV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 QLQYGEIIALEKQLAEEQTDE---PEHAPK--LLRNKVTDNEIAEVVSHATGIPVAKMLQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER KLL +E++L +RV+GQ+EA++AV+NA+RRSRSGLSD  +P GSF+FLGPTGVGKTE
Sbjct: 552 GERNKLLAMEDVLHERVIGQNEAVAAVANAVRRSRSGLSDPNKPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E++++RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSEDAMVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR +NF+NT+I+MTSNLGS  I EM     
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVNFKNTVIIMTSNLGSHAIHEMTDSSY 731

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AVM  V  +FRPEFINRID+I+VF  L    +  IA IQL+ L+ +L +  + L 
Sbjct: 732 EDIKTAVMASVTGHFRPEFINRIDEIVVFHGLGADQMTGIAEIQLDRLRTRLKERELGLS 791

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+  + ++G+D ++GAR
Sbjct: 792 VSDEAMNHLVSVGYDPVFGAR 812


>gi|416234148|ref|ZP_11629697.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 12P80B1]
 gi|326565494|gb|EGE15665.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 12P80B1]
          Length = 858

 Score =  759 bits (1961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/621 (58%), Positives = 496/621 (79%), Gaps = 5/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGE GVGKTAIVEGLAQRI+NGEVP SL +K +L LD+  L+AG KY GEFE+RL
Sbjct: 197 NNPVLIGEAGVGKTAIVEGLAQRIVNGEVPESLRNKSVLSLDMGSLIAGAKYHGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++    +II+FIDELHTM+G GK  G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLNELAKQDGNIILFIDELHTMVGAGKTSGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVKIMDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+E+DSKPE +DKL+RR+IQLK++ EA+K E D  +K 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMELDSKPESLDKLDRRIIQLKMQLEAVKNEEDAGAKS 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           ++  ++++I+  + +Y+ LE++WK EK  ++ S+Q++ +++  R+ + KA R+ D+   S
Sbjct: 437 QVKSLEQQIDDAQKQYSELEEVWKAEKVGVEKSKQLQAKLDTARITLEKALREGDYARAS 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGE+  LE+ L E+   +   P +A K  LL+ KV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 QLQYGEIIALEKQLAEEQTDE---PEHAPK--LLRNKVTDNEIAEVVSHATGIPVAKMLQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER KLL +E++L +RV+GQ+EA++AV+NA+RRSRSGLSD  +P GSF+FLGPTGVGKTE
Sbjct: 552 GERNKLLAMEDVLHERVIGQNEAVAAVANAVRRSRSGLSDPNKPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E++++RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSEDAMVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR +NF+NT+I+MTSNLGS  I EM     
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVNFKNTVIIMTSNLGSHAIHEMTDSPY 731

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AVM  V  +FRPEFINRID+I+VF  L    +  IA IQL+ L+ +L +  + L 
Sbjct: 732 EDIKTAVMASVTGHFRPEFINRIDEIVVFHGLGADQMTGIAEIQLDRLRTRLKERELGLS 791

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+  + ++G+D ++GAR
Sbjct: 792 VSDEAMNHLVSVGYDPVFGAR 812


>gi|119946869|ref|YP_944549.1| chaperone ClpB [Psychromonas ingrahamii 37]
 gi|119865473|gb|ABM04950.1| chaperone ClpB containing ATPase AAA-2 domain [Psychromonas
           ingrahamii 37]
          Length = 857

 Score =  759 bits (1961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/622 (58%), Positives = 495/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPV+IGEPGVGKTAIVEGLAQRIINGEVP  L +K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVIIGEPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSLDMGALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  II+FIDELHTM+G GK +G++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 260 KAVLSELSKEEGKIILFIDELHTMVGAGKADGAMDAGNMLKPALARGDLHCVGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPTVEDTIAILRGLKERYELHHKVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I++++DSKPE +DKLER++IQLK+E +A++ + DE+S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRLQMDSKPEELDKLERKIIQLKLEEKALQNDTDEASIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  ++  + + E  +  L+K+W+ EK  +  +Q IK+ IE+ RL +  A+R  D   +S
Sbjct: 440 RLADLESALAEKEQAFLALDKVWRAEKAALSGTQNIKQSIEQARLDLEVASRAVDLTRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  LE+ L + +Q ++Q      + TLLK  V   EIAEI++  TGIPV+K+++
Sbjct: 500 ELQYGVIPALEKQLVQAAQAEMQ------ETTLLKHAVTENEIAEILAHWTGIPVAKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L  RV+GQ+EAI A++NAIRRSR+GLSD  RP GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLKMETHLHSRVIGQNEAIDAIANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
            CK L+  +F++E++++RIDMSEF+EK S+SRL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 SCKALANFLFDSEDNMVRIDMSEFMEKFSVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRT++FRNT+I+MTSN+GSD I+E  +K  
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVSFRNTVIIMTSNIGSDIIQEKFDKVS 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + IK  +++ +   F+PEF+NRID+ +VF  L R++I SIA IQL  L+ +L   +  +
Sbjct: 734 YDEIKSYLLDILASQFKPEFLNRIDETVVFHPLGREHIKSIAEIQLRSLQKRLTDKDYLV 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
             +  A++ + + G+D +YGAR
Sbjct: 794 TFTDQAIQLLVDAGYDPVYGAR 815


>gi|416227810|ref|ZP_11627294.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 46P47B1]
 gi|416252188|ref|ZP_11638023.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis CO72]
 gi|421780382|ref|ZP_16216871.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis RH4]
 gi|326564678|gb|EGE14896.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 46P47B1]
 gi|326572614|gb|EGE22603.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis CO72]
 gi|407812538|gb|EKF83323.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis RH4]
          Length = 858

 Score =  759 bits (1961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/621 (58%), Positives = 496/621 (79%), Gaps = 5/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGE GVGKTAIVEGLAQRI+NGEVP SL +K +L LD+  L+AG KY GEFE+RL
Sbjct: 197 NNPVLIGEAGVGKTAIVEGLAQRIVNGEVPESLRNKSVLSLDMGSLIAGAKYHGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++    +II+FIDELHTM+G GK  G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLNELAKQDGNIILFIDELHTMVGAGKTSGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVKIMDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+E+DSKPE +DKL+RR+IQLK++ EA+K E D  +K 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMELDSKPESLDKLDRRIIQLKMQLEAVKNEEDAGAKS 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           ++  ++++I+  + +Y+ LE++WK EK  ++ S+Q++ +++  R+ + KA R+ D+   S
Sbjct: 437 QVKSLEQQIDDAQKQYSELEEVWKAEKVGVEKSKQLQAKLDTARITLEKALREGDYARAS 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGE+  LE+ L E+   +   P +A K  LL+ KV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 QLQYGEIIALEKQLAEEQTDE---PEHAPK--LLRNKVTDNEIAEVVSHATGIPVAKMLQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER KLL +E++L +RV+GQ+EA++AV+NA+RRSRSGLSD  +P GSF+FLGPTGVGKTE
Sbjct: 552 GERNKLLAMEDVLHERVIGQNEAVAAVANAVRRSRSGLSDPNKPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E++++RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSEDAMVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR +NF+NT+I+MTSNLGS  I EM     
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVNFKNTVIIMTSNLGSHAIHEMTDSPY 731

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AVM  V  +FRPEFINRID+I+VF  L    +  IA IQL+ L+ +L +  + L 
Sbjct: 732 EDIKTAVMASVTGHFRPEFINRIDEIVVFHGLGADQMTGIAEIQLDRLRTRLKERELGLS 791

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+  + ++G+D ++GAR
Sbjct: 792 VSDEAMNHLVSVGYDPVFGAR 812


>gi|296113575|ref|YP_003627513.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis RH4]
 gi|295921269|gb|ADG61620.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis BBH18]
          Length = 858

 Score =  759 bits (1961), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/621 (58%), Positives = 496/621 (79%), Gaps = 5/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGE GVGKTAIVEGLAQRI+NGEVP SL +K +L LD+  L+AG KY GEFE+RL
Sbjct: 197 NNPVLIGEAGVGKTAIVEGLAQRIVNGEVPESLRNKSVLSLDMGSLIAGAKYHGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++    +II+FIDELHTM+G GK  G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLNELAKQDGNIILFIDELHTMVGAGKTSGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVKIMDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+E+DSKPE +DKL+RR+IQLK++ EA+K E D  +K 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMELDSKPESLDKLDRRIIQLKMQLEAVKNEEDAGAKS 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           ++  ++++I+  + +Y+ LE++WK EK  ++ S+Q++ +++  R+ + KA R+ D+   S
Sbjct: 437 QVKSLEQQIDDAQKQYSELEEVWKAEKVGVEKSKQLQAKLDTARITLEKALREGDYARAS 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGE+  LE+ L E+   +   P +A K  LL+ KV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 QLQYGEIIALEKQLAEEQTDE---PEHAPK--LLRNKVTDNEIAEVVSHATGIPVAKMLQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER KLL +E++L +RV+GQ+EA++AV+NA+RRSRSGLSD  +P GSF+FLGPTGVGKTE
Sbjct: 552 GERNKLLAMEDVLHERVIGQNEAVAAVANAVRRSRSGLSDPNKPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E++++RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSEDAMVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR +NF+NT+I+MTSNLGS  I EM     
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVNFKNTVIIMTSNLGSHAIHEMTDSPY 731

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AVM  V  +FRPEFINRID+I+VF  L    +  IA IQL+ L+ +L +  + L 
Sbjct: 732 EDIKTAVMASVTRHFRPEFINRIDEIVVFHGLGADQMTGIAEIQLDRLRTRLKERELGLS 791

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+  + ++G+D ++GAR
Sbjct: 792 VSDEAMNHLVSVGYDPVFGAR 812


>gi|416238939|ref|ZP_11631622.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis BC1]
 gi|326567744|gb|EGE17850.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis BC1]
          Length = 858

 Score =  759 bits (1959), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 361/621 (58%), Positives = 495/621 (79%), Gaps = 5/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGE GVGKTAIVEGLAQRI+NGEVP SL +K +L LD+  L+AG KY GEFE+RL
Sbjct: 197 NNPVLIGEAGVGKTAIVEGLAQRIVNGEVPESLRNKSVLSLDMGSLIAGAKYHGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++    +II+FIDELHTM+G GK  G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLNELAKQDGNIILFIDELHTMVGAGKTSGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVKIMDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+E+DSKPE +DKL+RR+IQLK++ EA+K E D  +K 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMELDSKPESLDKLDRRIIQLKMQLEAVKNEEDAGAKS 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           ++  ++++I+  + +Y+ LE++WK EK  ++ S+Q + +++  R+ + KA R+ D+   S
Sbjct: 437 QVKSLEQQIDDAQKQYSELEEVWKAEKVGVEKSKQFQAKLDTARITLEKALREGDYARAS 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGE+  LE+ L E+   +   P +A K  LL+ KV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 QLQYGEIIALEKQLAEEQTDE---PEHAPK--LLRNKVTDNEIAEVVSHATGIPVAKMLQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER KLL +E++L +RV+GQ+EA++AV+NA+RRSRSGLSD  +P GSF+FLGPTGVGKTE
Sbjct: 552 GERNKLLAMEDVLHERVIGQNEAVAAVANAVRRSRSGLSDPNKPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E++++RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSEDAMVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR +NF+NT+I+MTSNLGS  I EM     
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVNFKNTVIIMTSNLGSHAIHEMTDSSY 731

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AVM  V  +FRPEFINRID+I+VF  L    +  IA IQL+ L+ +L +  + L 
Sbjct: 732 EDIKTAVMASVTGHFRPEFINRIDEIVVFHGLGADQMTGIAEIQLDRLRTRLKERELGLS 791

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+  + ++G+D ++GAR
Sbjct: 792 VSDEAMNHLVSVGYDPVFGAR 812


>gi|416157355|ref|ZP_11605098.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 101P30B1]
 gi|416224348|ref|ZP_11626489.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 103P14B1]
 gi|416255816|ref|ZP_11639385.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis O35E]
 gi|326562685|gb|EGE12987.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 103P14B1]
 gi|326574211|gb|EGE24159.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis 101P30B1]
 gi|326574996|gb|EGE24925.1| ATP-dependent chaperone ClpB [Moraxella catarrhalis O35E]
          Length = 858

 Score =  758 bits (1958), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/621 (57%), Positives = 495/621 (79%), Gaps = 5/621 (0%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGE GVGKTAIVEGLAQRI+NGEVP SL +K +L LD+  L+AG KY GEFE+RL
Sbjct: 197 NNPVLIGEAGVGKTAIVEGLAQRIVNGEVPESLRNKSVLSLDMGSLIAGAKYHGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E++    +II+FIDELHTM+G GK  G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLNELAKQDGNIILFIDELHTMVGAGKTSGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD A ERRFQK+LV+EP +E+TI+ILRGL+++YE+HHGV+I D AI+AA+++S+R
Sbjct: 317 RQYIEKDPALERRFQKVLVDEPTVEDTIAILRGLKERYELHHGVKIMDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+E+DSKPE +DKL+RR+IQLK++ EA+K E D  +K 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMELDSKPESLDKLDRRIIQLKMQLEAVKNEEDAGAKS 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           ++  ++++I+  + +Y+ LE++WK EK  ++ S+Q++ +++  R+ + KA R+ D+   S
Sbjct: 437 QVKSLEQQIDDAQKQYSELEEVWKAEKVGVEKSKQLQAKLDTARITLEKALREGDYARAS 496

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YGE+  LE+ L E+   +   P +  K  LL+ KV   EIAE+VS  TGIPV+K++Q
Sbjct: 497 QLQYGEIIALEKQLAEEQTDE---PEHTPK--LLRNKVTDNEIAEVVSHATGIPVAKMLQ 551

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER KLL +E++L +RV+GQ+EA++AV+NA+RRSRSGLSD  +P GSF+FLGPTGVGKTE
Sbjct: 552 GERNKLLAMEDVLHERVIGQNEAVAAVANAVRRSRSGLSDPNKPSGSFLFLGPTGVGKTE 611

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F++E++++RIDMSE++EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS+
Sbjct: 612 LTKALANFLFDSEDAMVRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYSV 671

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           +L DE+EKA+ DVFNILLQ+LDDGRLTD++GR +NF+NT+I+MTSNLGS  I EM     
Sbjct: 672 VLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVVNFKNTVIIMTSNLGSHAIHEMTDSPY 731

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
           E IK AVM  V  +FRPEFINRID+I+VF  L    +  IA IQL+ L+ +L +  + L 
Sbjct: 732 EDIKTAVMTSVTGHFRPEFINRIDEIVVFHGLGADQMTGIAEIQLDRLRTRLKERELGLS 791

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+  + ++G+D ++GAR
Sbjct: 792 VSDEAMNHLVSVGYDPVFGAR 812


>gi|148244858|ref|YP_001219552.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
           Vesicomyosocius okutanii HA]
 gi|146326685|dbj|BAF61828.1| ATP-dependent Clp protease ATP-binding subunit ClpB [Candidatus
           Vesicomyosocius okutanii HA]
          Length = 852

 Score =  758 bits (1956), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 370/623 (59%), Positives = 492/623 (78%), Gaps = 13/623 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIIN EV   +  K++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIINHEVSEGIKGKRVLSLDMTALIAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+ + Q  II+FIDELHTM+G GK +GS+DAGN+LKP L+RG+LHCIGATTLNEY
Sbjct: 260 KVVLKELEDKQGQIILFIDELHTMVGIGKSDGSMDAGNILKPALARGDLHCIGATTLNEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD+A ERRFQK+LV+EP  ++TI+ILRGL++KYEVHHGVEITDPAI+ A   S R
Sbjct: 320 RQYIEKDSALERRFQKVLVDEPTEQDTIAILRGLKEKYEVHHGVEITDPAIIVAVTYSTR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE MDKL+R+L+QLKIE  A+K+E D++SK 
Sbjct: 380 YITDRQLPDKAIDLIDEAASQIRMEIDSKPESMDKLDRKLVQLKIERMALKKEKDKASKT 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  + K I  LE +YANLEKIWK EK +++ +  +KEE+E+ +  +  A R ++   +S
Sbjct: 440 RLEELVKLIKSLEKEYANLEKIWKKEKLVVQSAHHLKEELEQAKSDLENAHRNNNLAKMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNAN--KFTLLKTKVGSEEIAEIVSRTTGIPVSKI 371
           +L+YG       I+ E  QK I +  NA+  + TLL+ KV   EIA IV+R TGIPV K+
Sbjct: 500 ELQYG-------IIPELEQK-INMAENADTEQMTLLRNKVTENEIAHIVARWTGIPVDKM 551

Query: 372 VQVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGK 431
           +  E++KLL +E ++ KR+VGQD+A+  +S+A+RR+RSGLSD  RP GSF+F+GPTGVGK
Sbjct: 552 MAGEKDKLLQMETIIHKRLVGQDKAVKVISDAVRRARSGLSDPNRPDGSFLFMGPTGVGK 611

Query: 432 TELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPY 491
           TEL K L+  +F+ E++I+RIDMSEF+EKHS++RLIGAPPGY+GYE+GG LTE VRRKPY
Sbjct: 612 TELTKALADFLFDTEQAIVRIDMSEFMEKHSVARLIGAPPGYVGYEQGGVLTEAVRRKPY 671

Query: 492 SLILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG 551
           S+ILLDEIEKA+SD+FNILLQ+LDDGRLTD++GRT++F+NTII+MTSNLGS  I++    
Sbjct: 672 SIILLDEIEKAHSDLFNILLQVLDDGRLTDSQGRTVDFKNTIIIMTSNLGSHLIQQNPGK 731

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
           D  +    +++E   +FRPEF+NRID+I+ F+ L +  I  IA  Q+ IL ++L K+N+ 
Sbjct: 732 DMSVELTKIVSE---HFRPEFVNRIDEIVTFKTLEKSQIKGIALRQIEILSSRLSKLNLR 788

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           + +S  A+  I N G++ ++GAR
Sbjct: 789 ITLSDIAISMIVNKGYNPVFGAR 811


>gi|403053914|ref|ZP_10908398.1| clpB [Acinetobacter bereziniae LMG 1003]
 gi|445412446|ref|ZP_21433190.1| ATP-dependent chaperone protein ClpB [Acinetobacter sp. WC-743]
 gi|444767082|gb|ELW91335.1| ATP-dependent chaperone protein ClpB [Acinetobacter sp. WC-743]
          Length = 859

 Score =  756 bits (1953), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 367/623 (58%), Positives = 495/623 (79%), Gaps = 8/623 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIINGEVP  L  K++L LD+  LLAG KYRGEFE+RL
Sbjct: 197 NNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGKRVLSLDLGSLLAGAKYRGEFEERL 256

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LK+++    +II+FIDELHT++G GK +G++DAGNMLKP L+RGEL C+GATTL+EY
Sbjct: 257 KAVLKDLAKFDGEIILFIDELHTLVGAGKGDGAMDAGNMLKPALARGELRCVGATTLDEY 316

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQ+IEKDAA ERRFQK+LV+EP +E+TI+ILRGL+ KY  HHGV+I D AI+AA+++S+R
Sbjct: 317 RQFIEKDAALERRFQKVLVDEPSVEDTIAILRGLKDKYATHHGVQILDSAIIAAAKMSHR 376

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++IK+EIDSKPE +D+L+RRLIQLK++ EA+K++ D  SK 
Sbjct: 377 YITDRQLPDKAIDLIDEAASRIKMEIDSKPEALDRLDRRLIQLKMQLEAVKKDADSVSKA 436

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
            +  ++K+I +++ +Y++LE++W  EK L+  + Q + E++K R    KA R+ D    S
Sbjct: 437 EVEHLEKQIAEVQKEYSDLEEVWIAEKRLVDGTNQAQIELDKARTAFEKAQREGDLAEAS 496

Query: 314 KLKYGELNKLE-RILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIV 372
           +L+YG + +L+ R+ +E+  +  + P       L++TKV   EIAE+VS  TGIPVSK++
Sbjct: 497 RLQYGVIPELQKRLNEEEVAEVNEEPK------LIRTKVTENEIAEVVSAATGIPVSKML 550

Query: 373 QVEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKT 432
           Q EREKLL++E+ L  RVVGQDEA+ AV+NA+RRSR+GLSD  RP GSF+FLGPTGVGKT
Sbjct: 551 QGEREKLLHMEDFLHNRVVGQDEAVVAVANAVRRSRAGLSDPNRPSGSFLFLGPTGVGKT 610

Query: 433 ELCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYS 492
           EL K L   +F+++++IIRIDMSEF+EKHS+SRL+GAPPGY+GYEEGG LTE VRRKPYS
Sbjct: 611 ELTKALGNFLFDSDDAIIRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGVLTEAVRRKPYS 670

Query: 493 LILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKG- 551
           ++L DE+EKA+ DVFNILLQ+LDDGRLTD++GR I+F+NT+IVMTSNLGS  ++E+ +G 
Sbjct: 671 VVLFDEVEKAHPDVFNILLQVLDDGRLTDSQGRVIDFKNTVIVMTSNLGSSDVRELGEGA 730

Query: 552 DKEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMD 611
             E ++  VMN V  +FRPEFINRID+++VF  L +  I  IA+IQL+ L+ +L + ++ 
Sbjct: 731 SDEDVRATVMNAVSQHFRPEFINRIDELVVFHSLKKSQIRGIADIQLDRLRARLAERDIR 790

Query: 612 LKISKAALKKISNIGFDLIYGAR 634
           L +   A   + + GFD +YGAR
Sbjct: 791 LNVDDQAFDILIDAGFDPVYGAR 813


>gi|400405050|ref|YP_006587909.1| ATP-dependent chaperone ClpB [secondary endosymbiont of
           Ctenarytaina eucalypti]
 gi|400363413|gb|AFP84481.1| ATP-dependent chaperone ClpB [secondary endosymbiont of
           Ctenarytaina eucalypti]
          Length = 857

 Score =  756 bits (1953), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/664 (56%), Positives = 502/664 (75%), Gaps = 15/664 (2%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRI+NGEVP  L   ++L LD+  L+AG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKKNRVLSLDMGSLVAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++   + ++ +FIDELHTMIG G  EG+IDA NMLKP L+RGELHCIGATTL+EY
Sbjct: 260 KSVLNDLLKEEGNVTLFIDELHTMIGAGNAEGTIDACNMLKPALARGELHCIGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R++IEKDAA ERRFQK+ V EP++E TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 320 RKFIEKDAALERRFQKVFVVEPNVENTIAILRGLKERYELHHNVQITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+I+IDSKPE +D+LERR++QLK+E +A+K+E DE+S K
Sbjct: 380 YIADRQLPDKAIDLIDEAASSIRIQIDSKPEELDRLERRIMQLKLEQQALKKESDEASIK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL L+  E+ K E  Y+ LE+ WK EK  +  +Q +K  +E+ ++ I +A R  D   +S
Sbjct: 440 RLALLHDELAKKESDYSALEEKWKAEKASLSGTQYLKATLEQAKISIEQARRACDLARMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ L+  +            F LL+ +V   EIAE+V+R TGIPVS++++
Sbjct: 500 ELQYGTIPELEKKLEAAAT------FKEEGFCLLRNRVTDIEIAEVVARWTGIPVSRMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            EREKLL +E  L + V+GQ EA+ AVSNAIRRSR+GL+D  RP GSFMFLGPTGVGKTE
Sbjct: 554 SEREKLLRMEQDLHQWVIGQHEAVEAVSNAIRRSRAGLADPNRPIGSFMFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F++ ++++RIDMSEF+EKHS+SRL+GAPPGY+GYEEGGYLTE VRR+PYS+
Sbjct: 614 LCKALTTFLFDSYDAMLRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTETVRRRPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD++GRT++FRNT+++MTSNLGS+ I+E   +  
Sbjct: 674 ILLDEIEKAHPDVFNILLQVLDDGRLTDSQGRTVDFRNTVVIMTSNLGSELIQERFGQMS 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  V++ V  +FRPEF+NR+D+I+VF  L+R++I  I  IQL  L  +L +     
Sbjct: 734 YQEMKRIVLDVVSHHFRPEFLNRVDEIVVFHPLSREDISDIVQIQLQRLYQRLEERGYKT 793

Query: 613 KISKAALKKISNIGFDLIYGARDVHGCKKSLSILLKKIHKKSPEANFIFLGDLINKGPQS 672
            IS+  L  +   GFD +YGAR +   K+++   +     ++P +  I  G L+   P  
Sbjct: 794 TISEEVLALLEQSGFDPVYGARPL---KRTIQQAI-----ENPLSQQILSGQLLPGKPVH 845

Query: 673 LDTL 676
           L  L
Sbjct: 846 LQVL 849


>gi|336314900|ref|ZP_08569814.1| ATP-dependent chaperone ClpB [Rheinheimera sp. A13L]
 gi|335880727|gb|EGM78612.1| ATP-dependent chaperone ClpB [Rheinheimera sp. A13L]
          Length = 861

 Score =  755 bits (1950), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 365/622 (58%), Positives = 495/622 (79%), Gaps = 7/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLA RIIN EVP  L  K++L LD+  LLAG KYRGEFE+RL
Sbjct: 200 NNPVLIGEPGVGKTAIVEGLALRIINKEVPEGLKDKRVLSLDMGSLLAGAKYRGEFEERL 259

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L E+S  +  +I+FIDE+HTM+G GK +G++DAGNMLKP L+RGELHC+GATTL+EY
Sbjct: 260 KAVLNELSKEEGRVILFIDEIHTMVGAGKADGAMDAGNMLKPALARGELHCLGATTLDEY 319

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R+YIEKDAA ERRFQK+LV+EP +E+TI+ILRGL+++YE+HH VEITDPAIVAA+ LS+R
Sbjct: 320 RKYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELHHAVEITDPAIVAAATLSHR 379

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           Y+SDR +PDKAIDLIDEAA+ I++++DSKPE +D+LERR+IQLK+E  A+ +E DE++KK
Sbjct: 380 YVSDRQLPDKAIDLIDEAASSIRMQMDSKPEELDRLERRIIQLKLEDNALAKETDEATKK 439

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R  +I+++I +L++KY  L+++W  EK  ++ +Q IK ++E+ RL +  A R  D   +S
Sbjct: 440 RRDMIQEQIRELDLKYNELDEVWSSEKAALQGTQNIKADLEQARLDMEVARRAGDLNRMS 499

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +LKY  +  LE+ L   SQ ++      ++ TLL+ KV  +EIA+++S+ TGIPVSK+++
Sbjct: 500 QLKYERIPALEKRLDLASQVEM------HEMTLLRNKVTEQEIADVLSKATGIPVSKMLE 553

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            ER+KLL +E  L KRVVGQ EA+ AVSN+IRRSR+GL+D  +P GSF+FLGPTGVGKTE
Sbjct: 554 GERDKLLRMEQELQKRVVGQAEALEAVSNSIRRSRAGLADPNKPIGSFLFLGPTGVGKTE 613

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ E+++IRIDMSEF+EKH++SRL+GAPPGY+GYEEGGYLTE VRRKPYS+
Sbjct: 614 LTKALAQFLFDTEDALIRIDMSEFMEKHAVSRLVGAPPGYVGYEEGGYLTEAVRRKPYSV 673

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           +LLDE+EKA+ DVFNILLQ+LDDGRLTD +GRT++F+NT+I+MTSNLGSD I+E  +  D
Sbjct: 674 VLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNLGSDLIQEHYQHQD 733

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            + +K  +M  +   FRPEF+NR+D+ +VF  L+  +I  IA+IQL  L+ +L      L
Sbjct: 734 YQQMKDMLMEVLSKQFRPEFLNRLDETVVFHPLDSAHIRHIASIQLQRLRLRLQDKGFAL 793

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            ++ AAL  ++  GFD ++GAR
Sbjct: 794 SVTDAALDLLAAAGFDAVFGAR 815


>gi|244539339|dbj|BAH83382.1| protein disaggregation chaperone [Candidatus Ishikawaella capsulata
           Mpkobe]
          Length = 723

 Score =  754 bits (1948), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 358/622 (57%), Positives = 493/622 (79%), Gaps = 9/622 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIGEPGVGKTAIVEGLAQRIIN EVP  L + ++L LD+A L+AG K+RGEFE+RL
Sbjct: 68  NNPVLIGEPGVGKTAIVEGLAQRIINNEVPEGLKNNRVLSLDLASLVAGAKFRGEFEERL 127

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +L ++S    ++I+F+DELH M+GTGKV+GS+DAGNMLKP L+RGELHCIGATTL+EY
Sbjct: 128 KNLLNDLSKQDGNVILFVDELHNMVGTGKVDGSMDAGNMLKPALARGELHCIGATTLDEY 187

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           R YIEKDAA ERRFQK+++ EP+IE+TI+ILRGL+++YE+HH V+ITDPAIVAA+ LS+R
Sbjct: 188 RNYIEKDAALERRFQKVIIAEPNIEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHR 247

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA+ I+++IDSKPE +D+LERR+IQLKIEH+A+++E DE+S K
Sbjct: 248 YITDRQLPDKAIDLIDEAASNIRLQIDSKPEFLDRLERRIIQLKIEHQALQKESDEASVK 307

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           R  +++ E+ K E +Y  L + W+ EK  +  +Q IK ++E+ R+ + +A R  D   +S
Sbjct: 308 RFTMLESELKKKEQEYKKLVQEWQTEKESLDRAQHIKAKLEQARISLEQARRVGDLAKMS 367

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG +  +++ L   +Q         N   LL+ +V   EIAE+++++TGIPV+++++
Sbjct: 368 ELQYGTIPTIKKELARATQ--------GNTIKLLRNRVTDVEIAEVLAKSTGIPVARMME 419

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E+ KLL +E +L  RV+GQ+ A+ A+SNAIRRSR+GL+D KRP GSF+FLGPTGVGKTE
Sbjct: 420 EEKNKLLRMEQVLHTRVIGQNGAVEAISNAIRRSRTGLADPKRPVGSFLFLGPTGVGKTE 479

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           LCK L+  +F+N+++++RIDMSEF+EKHS++RLIGAPPGYIGYE+GGYLTE +RR PYS+
Sbjct: 480 LCKALANFLFDNDDAMVRIDMSEFMEKHSVARLIGAPPGYIGYEKGGYLTEAIRRHPYSV 539

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKE-MEKGD 552
           +LLDEIEKA+ DVFNILLQ+LDDGRLTD+ GRTI+FRNT+++MTSN+GS+ I++   K  
Sbjct: 540 VLLDEIEKAHFDVFNILLQVLDDGRLTDSHGRTIDFRNTVVIMTSNIGSEVIRDKFNKLH 599

Query: 553 KEIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDL 612
            E IK  +M+ +K +FRPEFINR+D++IVF  L+ ++I  I  IQL  L  +L K    +
Sbjct: 600 YEEIKKLIMDMLKNFFRPEFINRVDEVIVFHPLSEQHIKDIVKIQLQKLSKRLEKSGYKI 659

Query: 613 KISKAALKKISNIGFDLIYGAR 634
            I    ++ ++  G+D IYGAR
Sbjct: 660 HIFDNVIEFLAKQGYDPIYGAR 681


>gi|118602768|ref|YP_903983.1| ATPase [Candidatus Ruthia magnifica str. Cm (Calyptogena
           magnifica)]
 gi|118567707|gb|ABL02512.1| ATPase AAA-2 domain protein [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 859

 Score =  753 bits (1943), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 364/621 (58%), Positives = 486/621 (78%), Gaps = 9/621 (1%)

Query: 14  SNPVLIGEPGVGKTAIVEGLAQRIINGEVPNSLLSKKILLLDIALLLAGTKYRGEFEDRL 73
           +NPVLIG+PGVGKTAIVEGLAQRIIN EVP  +  K++L LD+A L+AG KYRGEFE+RL
Sbjct: 207 NNPVLIGKPGVGKTAIVEGLAQRIINNEVPEGIKGKRVLSLDMAALVAGAKYRGEFEERL 266

Query: 74  KKILKEISNNQKDIIIFIDELHTMIGTGKVEGSIDAGNMLKPELSRGELHCIGATTLNEY 133
           K +LKE+   Q  +I+FIDELHT++G+ K +G++DAGNMLKP L+RG+LHC+GATTL+EY
Sbjct: 267 KAVLKELEAEQGQVILFIDELHTVVGSSKSDGAMDAGNMLKPALARGDLHCMGATTLDEY 326

Query: 134 RQYIEKDAAFERRFQKILVEEPDIEETISILRGLQKKYEVHHGVEITDPAIVAASELSYR 193
           RQYIEKD+A ERRFQK+LV+E   ++TI+ILRGL++KYEVHHGVEITDPAI+AA   S R
Sbjct: 327 RQYIEKDSALERRFQKVLVDESTEQDTIAILRGLKEKYEVHHGVEITDPAIIAAVTYSTR 386

Query: 194 YISDRFMPDKAIDLIDEAAAKIKIEIDSKPEIMDKLERRLIQLKIEHEAIKREYDESSKK 253
           YI+DR +PDKAIDLIDEAA++I++EIDSKPE MDKL+R+L+QLKIE  A+K+E D++SK 
Sbjct: 387 YITDRQLPDKAIDLIDEAASQIRMEIDSKPESMDKLDRKLVQLKIERMALKKEKDKASKV 446

Query: 254 RLLLIKKEINKLEIKYANLEKIWKYEKTLIKDSQQIKEEIEKVRLKINKATRKSDWQTVS 313
           RL  +   I  LE +Y +LE+IWK EK +++D+  +KEE+E+ +     A R +D   +S
Sbjct: 447 RLKELVALIQSLEKEYTDLEEIWKKEKLVVQDAHHLKEELEQAKANFENAHRNNDLAKMS 506

Query: 314 KLKYGELNKLERILKEKSQKDIQLPNNANKFTLLKTKVGSEEIAEIVSRTTGIPVSKIVQ 373
           +L+YG + +LE+ +      D Q      + TLL+ KV  +EIA IV+R TGIP+ K++ 
Sbjct: 507 ELQYGIIPELEKKIGTTENADTQ------QMTLLRNKVTEDEIAHIVARWTGIPMDKMIA 560

Query: 374 VEREKLLNIENLLCKRVVGQDEAISAVSNAIRRSRSGLSDAKRPYGSFMFLGPTGVGKTE 433
            E++KLL +E ++ KR+VGQD+A+  +SNAIRR+RSGLSD  RP GSF+F+GPTGVGKTE
Sbjct: 561 GEKDKLLKMEAIIHKRLVGQDKAVKVISNAIRRARSGLSDPNRPDGSFLFMGPTGVGKTE 620

Query: 434 LCKTLSACIFNNEESIIRIDMSEFIEKHSISRLIGAPPGYIGYEEGGYLTEIVRRKPYSL 493
           L K L+  +F+ E++I+R+DMSEF+EKHS++RLIGAPPGY+GYE+GG LTE VRRKPYS+
Sbjct: 621 LTKALADFLFDTEQAIVRVDMSEFMEKHSVARLIGAPPGYVGYEQGGMLTEAVRRKPYSI 680

Query: 494 ILLDEIEKANSDVFNILLQILDDGRLTDNRGRTINFRNTIIVMTSNLGSDKIKEMEKGDK 553
           ILLDEIEKA+ DVFNILLQ+LDDGRLTD +GRTI+F+NT+I+MTSNLGS  I++    D 
Sbjct: 681 ILLDEIEKAHLDVFNILLQVLDDGRLTDGQGRTIDFKNTVIIMTSNLGSYLIQQNPGKDM 740

Query: 554 EIIKLAVMNEVKIYFRPEFINRIDDIIVFRYLNRKNILSIANIQLNILKNKLLKMNMDLK 613
                 ++NE   +FRPEF+NRID+II F+ L +  I  IA  Q+ IL  +L K+N+ L 
Sbjct: 741 SAELSKIVNE---HFRPEFVNRIDEIITFKMLEKYQIKDIALKQIEILSVRLAKLNLKLT 797

Query: 614 ISKAALKKISNIGFDLIYGAR 634
           +S  A+  I + G+D ++GAR
Sbjct: 798 LSNTAINMIVDRGYDPVFGAR 818


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.319    0.138    0.391 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,405,609,302
Number of Sequences: 23463169
Number of extensions: 571102973
Number of successful extensions: 2423383
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 14485
Number of HSP's successfully gapped in prelim test: 13990
Number of HSP's that attempted gapping in prelim test: 2333658
Number of HSP's gapped (non-prelim): 62603
length of query: 899
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 747
effective length of database: 8,792,793,679
effective search space: 6568216878213
effective search space used: 6568216878213
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 82 (36.2 bits)