BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2889
(163 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q223D2|ATPF1_RHOFD ATP synthase subunit b 1 OS=Rhodoferax ferrireducens (strain DSM
15236 / ATCC BAA-621 / T118) GN=atpF1 PE=3 SV=1
Length = 156
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 95/147 (64%)
Query: 17 HGIRRTIKCCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATH 76
I I FT KF+WPP+ KALD+R +KIAD LAAA+ K ++S KR++ EL +
Sbjct: 10 QAIVFAILVWFTMKFVWPPITKALDERAQKIADGLAAADKAKSELSSANKRVEAELALSR 69
Query: 77 EENKNRINLTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAI 136
E R+ +++ + I+E++K KATEEAN I+ A+VE +Q N ARE L ++ LA+
Sbjct: 70 TETTARLADADRRGQSIVEEAKSKATEEANKIIAAAKVEAEQQSNKAREVLREQVAALAV 129
Query: 137 KSAEKILNNKITIEVNSSLLNQLKIEL 163
K AE+IL ++ V++ LL +LK+EL
Sbjct: 130 KGAEQILRKEVNASVHADLLGRLKLEL 156
>sp|Q12GQ4|ATPF_POLSJ ATP synthase subunit b OS=Polaromonas sp. (strain JS666 / ATCC
BAA-500) GN=atpF PE=3 SV=1
Length = 156
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 94/142 (66%)
Query: 22 TIKCCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKN 81
I FT KF+WPP++KALD+R +KIAD LAAA+ K ++S KR+++EL + E+
Sbjct: 15 AILVWFTMKFVWPPIMKALDERAQKIADGLAAADKAKSELSVANKRVEEELAKSRGESAV 74
Query: 82 RINLTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEK 141
R+ E++ + +IE++K KATEE + I+ A+VE +Q ARE L ++ LA+K AE+
Sbjct: 75 RLAEAERRAQALIEEAKAKATEEGSKIIAAAKVEAEQQTVKARETLREQVAALAVKGAEQ 134
Query: 142 ILNNKITIEVNSSLLNQLKIEL 163
IL ++ V++ LL +LK EL
Sbjct: 135 ILRKEVNAGVHADLLGRLKTEL 156
>sp|A2SC66|ATPF_METPP ATP synthase subunit b OS=Methylibium petroleiphilum (strain PM1)
GN=atpF PE=3 SV=1
Length = 156
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 94/141 (66%)
Query: 23 IKCCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNR 82
I FT KF+WPP+ KALD+R KIAD LAAA+ K +++ KR++++L + +EN R
Sbjct: 16 ILAWFTMKFVWPPITKALDERASKIADGLAAADRAKTELASANKRVEEQLASVRDENARR 75
Query: 83 INLTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKI 142
+ EK+ I+E +KK+ATEE + I+ A+ E +Q+ ARE+L ++ LA+K AE+I
Sbjct: 76 LADAEKRALAIVEDAKKRATEEGSKIVAAAKSEAEQQLVQARESLREQVAALAVKGAEQI 135
Query: 143 LNNKITIEVNSSLLNQLKIEL 163
L ++ V++ LL++LK EL
Sbjct: 136 LKREVNAGVHADLLSRLKTEL 156
>sp|Q0BJL9|ATPF_BURCM ATP synthase subunit b OS=Burkholderia ambifaria (strain ATCC
BAA-244 / AMMD) GN=atpF PE=3 SV=1
Length = 156
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 84/139 (60%)
Query: 25 CCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRIN 84
FT KF+WPPLI ALD+R KKIAD LAAA K ++ KR+ +EL + + RI
Sbjct: 18 AWFTMKFVWPPLINALDERSKKIADGLAAAEKGKAELDAAHKRVDQELAQARNDGQQRIA 77
Query: 85 LTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILN 144
EK+ + + E+ K A EA I+ A+ E +QI ARE L E+ +LA+K AE+IL
Sbjct: 78 DAEKRAQAVAEEIKANAQAEAARIVAQAKAEAEQQIVKAREALRGEVASLAVKGAEQILK 137
Query: 145 NKITIEVNSSLLNQLKIEL 163
++ ++ LLNQLK EL
Sbjct: 138 REVDQTAHAQLLNQLKAEL 156
>sp|B1YQL0|ATPF_BURA4 ATP synthase subunit b OS=Burkholderia ambifaria (strain MC40-6)
GN=atpF PE=3 SV=1
Length = 156
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 84/139 (60%)
Query: 25 CCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRIN 84
FT KF+WPPLI ALD+R KKIAD LAAA K ++ KR+ +EL + + RI
Sbjct: 18 AWFTMKFVWPPLINALDERSKKIADGLAAAEKGKAELDAAHKRVDQELAQARNDGQQRIA 77
Query: 85 LTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILN 144
EK+ + + E+ K A EA I+ A+ E +QI ARE L E+ +LA+K AE+IL
Sbjct: 78 DAEKRAQAVAEEIKANAQAEAARIVAQAKAEAEQQIVKAREALRGEVASLAVKGAEQILK 137
Query: 145 NKITIEVNSSLLNQLKIEL 163
++ ++ LLNQLK EL
Sbjct: 138 REVDQTAHAQLLNQLKAEL 156
>sp|Q39KY0|ATPF_BURS3 ATP synthase subunit b OS=Burkholderia sp. (strain 383) GN=atpF
PE=3 SV=1
Length = 156
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 83/139 (59%)
Query: 25 CCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRIN 84
FT KF+WPPLI ALD+R KKIAD LAAA K ++ KR+ +EL + + RI
Sbjct: 18 AWFTMKFVWPPLINALDERSKKIADGLAAAEKGKAELDAAHKRVDQELAQARNDGQQRIA 77
Query: 85 LTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILN 144
EK+ + + E+ K A EA I+ A+ E +QI ARE L E+ LA+K AE+IL
Sbjct: 78 DAEKRAQAVAEEIKSNAQAEAARIIAQAKAEAEQQIVKAREALRGEVATLAVKGAEQILK 137
Query: 145 NKITIEVNSSLLNQLKIEL 163
++ ++ LLNQLK EL
Sbjct: 138 REVDQTAHAQLLNQLKAEL 156
>sp|A4JA31|ATPF_BURVG ATP synthase subunit b OS=Burkholderia vietnamiensis (strain G4 /
LMG 22486) GN=atpF PE=3 SV=1
Length = 156
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 83/139 (59%)
Query: 25 CCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRIN 84
FT KF+WPPLI ALD+R KKIAD LAAA K ++ KR+ +EL + + RI
Sbjct: 18 AWFTMKFVWPPLINALDERSKKIADGLAAAEKGKAELDAAHKRVDQELAQARNDGQQRIA 77
Query: 85 LTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILN 144
EK+ + + E+ K A EA I+ A+ E +QI ARE L E+ LA+K AE+IL
Sbjct: 78 DAEKRAQAVAEEIKANAQAEAARIVAQAKAEAEQQIVKARETLRGEVAALAVKGAEQILK 137
Query: 145 NKITIEVNSSLLNQLKIEL 163
++ ++ LLNQLK EL
Sbjct: 138 REVDQTAHAQLLNQLKAEL 156
>sp|B4EEY5|ATPF_BURCJ ATP synthase subunit b OS=Burkholderia cepacia (strain J2315 / LMG
16656) GN=atpF PE=3 SV=1
Length = 156
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 83/139 (59%)
Query: 25 CCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRIN 84
FT KF+WPPLI ALD+R KKIAD LAAA K ++ KR+ +EL + + RI
Sbjct: 18 AWFTMKFVWPPLINALDERSKKIADGLAAAEKGKAELDAAHKRVDQELAQARNDGQQRIA 77
Query: 85 LTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILN 144
EK+ + + E+ K A EA I+ A+ E +QI ARE L E+ LA+K AE+IL
Sbjct: 78 DAEKRAQAVAEEIKANAQAEAARIVAQAKAEAEQQIVKAREALRGEVAALAVKGAEQILK 137
Query: 145 NKITIEVNSSLLNQLKIEL 163
++ ++ LLNQLK EL
Sbjct: 138 REVDQTAHAQLLNQLKAEL 156
>sp|A0K2X9|ATPF_BURCH ATP synthase subunit b OS=Burkholderia cenocepacia (strain HI2424)
GN=atpF PE=3 SV=1
Length = 156
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 83/139 (59%)
Query: 25 CCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRIN 84
FT KF+WPPLI ALD+R KKIAD LAAA K ++ KR+ +EL + + RI
Sbjct: 18 AWFTMKFVWPPLINALDERSKKIADGLAAAEKGKAELDAAHKRVDQELAQARNDGQQRIA 77
Query: 85 LTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILN 144
EK+ + + E+ K A EA I+ A+ E +QI ARE L E+ LA+K AE+IL
Sbjct: 78 DAEKRAQAVAEEIKANAQAEAARIVAQAKAEAEQQIVKAREALRGEVAALAVKGAEQILK 137
Query: 145 NKITIEVNSSLLNQLKIEL 163
++ ++ LLNQLK EL
Sbjct: 138 REVDQTAHAQLLNQLKAEL 156
>sp|B1JSV3|ATPF_BURCC ATP synthase subunit b OS=Burkholderia cenocepacia (strain MC0-3)
GN=atpF PE=3 SV=1
Length = 156
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 83/139 (59%)
Query: 25 CCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRIN 84
FT KF+WPPLI ALD+R KKIAD LAAA K ++ KR+ +EL + + RI
Sbjct: 18 AWFTMKFVWPPLINALDERSKKIADGLAAAEKGKAELDAAHKRVDQELAQARNDGQQRIA 77
Query: 85 LTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILN 144
EK+ + + E+ K A EA I+ A+ E +QI ARE L E+ LA+K AE+IL
Sbjct: 78 DAEKRAQAVAEEIKANAQAEAARIVAQAKAEAEQQIVKAREALRGEVAALAVKGAEQILK 137
Query: 145 NKITIEVNSSLLNQLKIEL 163
++ ++ LLNQLK EL
Sbjct: 138 REVDQTAHAQLLNQLKAEL 156
>sp|Q1BRA6|ATPF_BURCA ATP synthase subunit b OS=Burkholderia cenocepacia (strain AU 1054)
GN=atpF PE=3 SV=1
Length = 156
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 83/139 (59%)
Query: 25 CCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRIN 84
FT KF+WPPLI ALD+R KKIAD LAAA K ++ KR+ +EL + + RI
Sbjct: 18 AWFTMKFVWPPLINALDERSKKIADGLAAAEKGKAELDAAHKRVDQELAQARNDGQQRIA 77
Query: 85 LTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILN 144
EK+ + + E+ K A EA I+ A+ E +QI ARE L E+ LA+K AE+IL
Sbjct: 78 DAEKRAQAVAEEIKANAQAEAARIVAQAKAEAEQQIVKAREALRGEVAALAVKGAEQILK 137
Query: 145 NKITIEVNSSLLNQLKIEL 163
++ ++ LLNQLK EL
Sbjct: 138 REVDQTAHAQLLNQLKAEL 156
>sp|A9AJG0|ATPF_BURM1 ATP synthase subunit b OS=Burkholderia multivorans (strain ATCC
17616 / 249) GN=atpF PE=3 SV=1
Length = 156
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 61/139 (43%), Positives = 83/139 (59%)
Query: 25 CCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRIN 84
FT KF+WPPLI ALD+R KKIAD LAAA K ++ KR+ +EL + + RI
Sbjct: 18 AWFTMKFVWPPLINALDERSKKIADGLAAAEKGKAELEAAHKRVDQELAQARNDGQQRIA 77
Query: 85 LTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILN 144
EK+ + + E+ K A EA I+ A+ E +QI ARE L E+ LA+K AE+IL
Sbjct: 78 DAEKRAQAVAEEIKANAQAEAARIVAQAKAEAEQQIVKAREALRGEVAALAVKGAEQILK 137
Query: 145 NKITIEVNSSLLNQLKIEL 163
++ ++ LLNQLK EL
Sbjct: 138 REVDQTAHAQLLNQLKAEL 156
>sp|Q46VX6|ATPF_CUPPJ ATP synthase subunit b OS=Cupriavidus pinatubonensis (strain JMP134
/ LMG 1197) GN=atpF PE=3 SV=1
Length = 156
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 86/141 (60%)
Query: 23 IKCCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNR 82
I KFIWPPL+KALD+R KKIAD LAAA K ++ KR+ + + E R
Sbjct: 16 ILWWVVAKFIWPPLVKALDERAKKIADGLAAAEKGKAELELANKRVDQAMAEARTEGAQR 75
Query: 83 INLTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKI 142
+ EK+ +L E+ K+ A EA I+ A+ E +Q+ ARE+L +++ LA+K AE+I
Sbjct: 76 VADAEKRAQLTAEEIKQNAQAEAARIIAQAKAEAEQQVTRARESLRDQVAVLAVKGAEQI 135
Query: 143 LNNKITIEVNSSLLNQLKIEL 163
L ++ +V+S LLNQLK EL
Sbjct: 136 LKREVNAQVHSDLLNQLKAEL 156
>sp|Q1LHK6|ATPF_RALME ATP synthase subunit b OS=Ralstonia metallidurans (strain CH34 /
ATCC 43123 / DSM 2839) GN=atpF PE=3 SV=1
Length = 156
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 86/141 (60%)
Query: 23 IKCCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNR 82
I KFIWPPL+KALD+R KKIAD LAAA K ++ KR+ + + E R
Sbjct: 16 ILWWVVAKFIWPPLVKALDERAKKIADGLAAAEKGKAELELANKRVDQAMAEARTEGAQR 75
Query: 83 INLTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKI 142
+ EK+ +L ++ K+ A EA I+ A+ E +Q+ ARE+L +++ LA+K AE+I
Sbjct: 76 VADAEKRAQLTADEIKQNAQAEAARIIAQAKAEAEQQVTRARESLRDQVAVLAVKGAEQI 135
Query: 143 LNNKITIEVNSSLLNQLKIEL 163
L ++ +V++ LLNQLK EL
Sbjct: 136 LKREVNAQVHADLLNQLKAEL 156
>sp|A9BPU3|ATPF_DELAS ATP synthase subunit b OS=Delftia acidovorans (strain DSM 14801 /
SPH-1) GN=atpF PE=3 SV=1
Length = 156
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/141 (43%), Positives = 91/141 (64%)
Query: 23 IKCCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNR 82
I FT KF+WPP+ KALD+R KIAD LAAA+ K ++ KR+++EL T E +R
Sbjct: 16 ILVLFTMKFVWPPIAKALDERALKIADGLAAADKAKTDLAAANKRVEQELAQTRNETASR 75
Query: 83 INLTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKI 142
+ E++ + IIE++K +A+EE N I+ AR E +Q ARE L ++ LA+K AE+I
Sbjct: 76 LADAERRAQAIIEEAKARASEEGNKIVAAARAEAEQQTVQAREALREQVAALAVKGAEQI 135
Query: 143 LNNKITIEVNSSLLNQLKIEL 163
L ++ V++ LLN+LK EL
Sbjct: 136 LRKEVDAGVHADLLNRLKTEL 156
>sp|Q2STE5|ATPF_BURTA ATP synthase subunit b OS=Burkholderia thailandensis (strain E264 /
ATCC 700388 / DSM 13276 / CIP 106301) GN=atpF PE=3 SV=1
Length = 156
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 82/139 (58%)
Query: 25 CCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRIN 84
FT KF+WPPLI ALD+R KKIAD LAAA K ++ KR+ +EL + + RI
Sbjct: 18 AWFTMKFVWPPLINALDERSKKIADGLAAAEKGKAELEAAHKRVDQELAQARNDGQQRIA 77
Query: 85 LTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILN 144
EK+ + ++ K A EA I+ A+ E +QI ARE L E+ LA+K AE+IL
Sbjct: 78 DAEKRALAVADEIKTNAQAEAARIIAQAKAEAEQQIVKARETLRGEVAALAVKGAEQILK 137
Query: 145 NKITIEVNSSLLNQLKIEL 163
++ ++ LLNQLK EL
Sbjct: 138 REVDQTAHAELLNQLKAEL 156
>sp|Q63PH6|ATPF_BURPS ATP synthase subunit b OS=Burkholderia pseudomallei (strain K96243)
GN=atpF PE=3 SV=2
Length = 156
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 82/139 (58%)
Query: 25 CCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRIN 84
FT KF+WPPLI ALD+R KKIAD LAAA K ++ KR+ +EL + + RI
Sbjct: 18 AWFTMKFVWPPLINALDERSKKIADGLAAAEKGKAELEAAHKRVDQELAQARNDGQQRIA 77
Query: 85 LTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILN 144
EK+ + ++ K A EA I+ A+ E +QI ARE L E+ LA+K AE+IL
Sbjct: 78 DAEKRALAVADEIKTNAQAEAARIIAQAKAEAEQQIVKARETLRGEVAALAVKGAEQILK 137
Query: 145 NKITIEVNSSLLNQLKIEL 163
++ ++ LLNQLK EL
Sbjct: 138 REVDQTAHAELLNQLKAEL 156
>sp|A3NF44|ATPF_BURP6 ATP synthase subunit b OS=Burkholderia pseudomallei (strain 668)
GN=atpF PE=3 SV=1
Length = 156
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 82/139 (58%)
Query: 25 CCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRIN 84
FT KF+WPPLI ALD+R KKIAD LAAA K ++ KR+ +EL + + RI
Sbjct: 18 AWFTMKFVWPPLINALDERSKKIADGLAAAEKGKAELEAAHKRVDQELAQARNDGQQRIA 77
Query: 85 LTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILN 144
EK+ + ++ K A EA I+ A+ E +QI ARE L E+ LA+K AE+IL
Sbjct: 78 DAEKRALAVADEIKTNAQAEAARIIAQAKAEAEQQIVKARETLRGEVAALAVKGAEQILK 137
Query: 145 NKITIEVNSSLLNQLKIEL 163
++ ++ LLNQLK EL
Sbjct: 138 REVDQTAHAELLNQLKAEL 156
>sp|Q3JXV4|ATPF_BURP1 ATP synthase subunit b OS=Burkholderia pseudomallei (strain 1710b)
GN=atpF PE=3 SV=1
Length = 156
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 82/139 (58%)
Query: 25 CCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRIN 84
FT KF+WPPLI ALD+R KKIAD LAAA K ++ KR+ +EL + + RI
Sbjct: 18 AWFTMKFVWPPLINALDERSKKIADGLAAAEKGKAELEAAHKRVDQELAQARNDGQQRIA 77
Query: 85 LTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILN 144
EK+ + ++ K A EA I+ A+ E +QI ARE L E+ LA+K AE+IL
Sbjct: 78 DAEKRALAVADEIKTNAQAEAARIIAQAKAEAEQQIVKARETLRGEVAALAVKGAEQILK 137
Query: 145 NKITIEVNSSLLNQLKIEL 163
++ ++ LLNQLK EL
Sbjct: 138 REVDQTAHAELLNQLKAEL 156
>sp|A3P0Z4|ATPF_BURP0 ATP synthase subunit b OS=Burkholderia pseudomallei (strain 1106a)
GN=atpF PE=3 SV=1
Length = 156
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 82/139 (58%)
Query: 25 CCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRIN 84
FT KF+WPPLI ALD+R KKIAD LAAA K ++ KR+ +EL + + RI
Sbjct: 18 AWFTMKFVWPPLINALDERSKKIADGLAAAEKGKAELEAAHKRVDQELAQARNDGQQRIA 77
Query: 85 LTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILN 144
EK+ + ++ K A EA I+ A+ E +QI ARE L E+ LA+K AE+IL
Sbjct: 78 DAEKRALAVADEIKTNAQAEAARIIAQAKAEAEQQIVKARETLRGEVAALAVKGAEQILK 137
Query: 145 NKITIEVNSSLLNQLKIEL 163
++ ++ LLNQLK EL
Sbjct: 138 REVDQTAHAELLNQLKAEL 156
>sp|A1V8T5|ATPF_BURMS ATP synthase subunit b OS=Burkholderia mallei (strain SAVP1)
GN=atpF PE=3 SV=1
Length = 156
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 82/139 (58%)
Query: 25 CCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRIN 84
FT KF+WPPLI ALD+R KKIAD LAAA K ++ KR+ +EL + + RI
Sbjct: 18 AWFTMKFVWPPLINALDERSKKIADGLAAAEKGKAELEAAHKRVDQELAQARNDGQQRIA 77
Query: 85 LTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILN 144
EK+ + ++ K A EA I+ A+ E +QI ARE L E+ LA+K AE+IL
Sbjct: 78 DAEKRALAVADEIKTNAQAEAARIIAQAKAEAEQQIVKARETLRGEVAALAVKGAEQILK 137
Query: 145 NKITIEVNSSLLNQLKIEL 163
++ ++ LLNQLK EL
Sbjct: 138 REVDQTAHAELLNQLKAEL 156
>sp|Q62FR9|ATPF_BURMA ATP synthase subunit b OS=Burkholderia mallei (strain ATCC 23344)
GN=atpF PE=3 SV=1
Length = 156
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 82/139 (58%)
Query: 25 CCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRIN 84
FT KF+WPPLI ALD+R KKIAD LAAA K ++ KR+ +EL + + RI
Sbjct: 18 AWFTMKFVWPPLINALDERSKKIADGLAAAEKGKAELEAAHKRVDQELAQARNDGQQRIA 77
Query: 85 LTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILN 144
EK+ + ++ K A EA I+ A+ E +QI ARE L E+ LA+K AE+IL
Sbjct: 78 DAEKRALAVADEIKTNAQAEAARIIAQAKAEAEQQIVKARETLRGEVAALAVKGAEQILK 137
Query: 145 NKITIEVNSSLLNQLKIEL 163
++ ++ LLNQLK EL
Sbjct: 138 REVDQTAHAELLNQLKAEL 156
>sp|A2S6K2|ATPF_BURM9 ATP synthase subunit b OS=Burkholderia mallei (strain NCTC 10229)
GN=atpF PE=3 SV=1
Length = 156
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 82/139 (58%)
Query: 25 CCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRIN 84
FT KF+WPPLI ALD+R KKIAD LAAA K ++ KR+ +EL + + RI
Sbjct: 18 AWFTMKFVWPPLINALDERSKKIADGLAAAEKGKAELEAAHKRVDQELAQARNDGQQRIA 77
Query: 85 LTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILN 144
EK+ + ++ K A EA I+ A+ E +QI ARE L E+ LA+K AE+IL
Sbjct: 78 DAEKRALAVADEIKTNAQAEAARIIAQAKAEAEQQIVKARETLRGEVAALAVKGAEQILK 137
Query: 145 NKITIEVNSSLLNQLKIEL 163
++ ++ LLNQLK EL
Sbjct: 138 REVDQTAHAELLNQLKAEL 156
>sp|A3MQJ5|ATPF_BURM7 ATP synthase subunit b OS=Burkholderia mallei (strain NCTC 10247)
GN=atpF PE=3 SV=1
Length = 156
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 82/139 (58%)
Query: 25 CCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRIN 84
FT KF+WPPLI ALD+R KKIAD LAAA K ++ KR+ +EL + + RI
Sbjct: 18 AWFTMKFVWPPLINALDERSKKIADGLAAAEKGKAELEAAHKRVDQELAQARNDGQQRIA 77
Query: 85 LTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILN 144
EK+ + ++ K A EA I+ A+ E +QI ARE L E+ LA+K AE+IL
Sbjct: 78 DAEKRALAVADEIKTNAQAEAARIIAQAKAEAEQQIVKARETLRGEVAALAVKGAEQILK 137
Query: 145 NKITIEVNSSLLNQLKIEL 163
++ ++ LLNQLK EL
Sbjct: 138 REVDQTAHAELLNQLKAEL 156
>sp|Q0K5M3|ATPF_CUPNH ATP synthase subunit b OS=Cupriavidus necator (strain ATCC 17699 /
H16 / DSM 428 / Stanier 337) GN=atpF PE=3 SV=1
Length = 156
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 85/141 (60%)
Query: 23 IKCCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNR 82
I KFIWPPL+KALD+R KKIAD LAAA K ++ KR+ + + E R
Sbjct: 16 ILWWVVAKFIWPPLVKALDERAKKIADGLAAAEKGKAELELANKRVDQAMAEARTEGAQR 75
Query: 83 INLTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKI 142
+ EK+ +L ++ K+ A EA I+ A+ E +Q+ ARE L +++ LA+K AE+I
Sbjct: 76 VADAEKRAQLTADEIKQNAQAEAARIIAQAKAEAEQQVTRAREALRDQVAVLAVKGAEQI 135
Query: 143 LNNKITIEVNSSLLNQLKIEL 163
L ++ +V++ LLNQLK EL
Sbjct: 136 LKREVNAQVHTDLLNQLKAEL 156
>sp|B2T7K4|ATPF_BURPP ATP synthase subunit b OS=Burkholderia phytofirmans (strain DSM
17436 / PsJN) GN=atpF PE=3 SV=1
Length = 156
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 84/141 (59%)
Query: 23 IKCCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNR 82
I FT KF+WPPLI ALD+R KKIAD L+AA K ++ KR+ +EL + + R
Sbjct: 16 ILAWFTMKFVWPPLINALDERSKKIADGLSAAEKGKAELEAAHKRVDQELAQARNDGQQR 75
Query: 83 INLTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKI 142
I EK+ + ++ K +A EA I+ A+ + +Q+ ARE L E+ LA+K AE+I
Sbjct: 76 IADAEKRAVAVADEIKAQAQAEAARIIAQAKADAEQQVVKARETLRGEVAALAVKGAEQI 135
Query: 143 LNNKITIEVNSSLLNQLKIEL 163
L ++ ++ LLNQLK EL
Sbjct: 136 LKREVDQAAHADLLNQLKAEL 156
>sp|A4GAH3|ATPF_HERAR ATP synthase subunit b OS=Herminiimonas arsenicoxydans GN=atpF PE=3
SV=1
Length = 156
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/141 (44%), Positives = 89/141 (63%)
Query: 23 IKCCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNR 82
I FT KF+WPPL+ ALD+R KKIAD LAAA K ++ KR Q EL + E + R
Sbjct: 16 ILAGFTMKFVWPPLMNALDERAKKIADGLAAAERGKSDLAAAEKRAQAELTSAQEAGQKR 75
Query: 83 INLTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKI 142
I EK+ + II+++KK A EEA I+ A+ + +Q+ RE L +++ LA+K AE+I
Sbjct: 76 IGDAEKRGQSIIDEAKKTAAEEAARIIATAKADADQQVTQVREALRDQVATLAVKGAEQI 135
Query: 143 LNNKITIEVNSSLLNQLKIEL 163
L ++ V++ LLNQLK EL
Sbjct: 136 LKREVNAAVHADLLNQLKAEL 156
>sp|Q13SP8|ATPF_BURXL ATP synthase subunit b OS=Burkholderia xenovorans (strain LB400)
GN=atpF PE=3 SV=1
Length = 156
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 84/141 (59%)
Query: 23 IKCCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNR 82
I FT KF+WPPLI ALD+R KKIAD L+AA K ++ KR+ +EL + + R
Sbjct: 16 ILAWFTMKFVWPPLINALDERSKKIADGLSAAEKGKAELEAAHKRVDQELAQARNDGQQR 75
Query: 83 INLTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKI 142
+ EK+ + ++ K +A EA I+ A+ + +Q+ ARE L E+ LA+K AE+I
Sbjct: 76 VADAEKRAVAVADEIKAQAQAEAARIIAQAKADAEQQVVKARETLRGEVAALAVKGAEQI 135
Query: 143 LNNKITIEVNSSLLNQLKIEL 163
L ++ ++ LLNQLK EL
Sbjct: 136 LKREVDQAAHADLLNQLKAEL 156
>sp|B2UGV3|ATPF_RALPJ ATP synthase subunit b OS=Ralstonia pickettii (strain 12J) GN=atpF
PE=3 SV=1
Length = 156
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 86/141 (60%)
Query: 23 IKCCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNR 82
I KFIWPPL+KALD+R KKIAD LAAA+ K ++ KR+ + L E R
Sbjct: 16 ILWWVVAKFIWPPLVKALDERAKKIADGLAAADKGKAELELANKRVDQALTEARNEGAQR 75
Query: 83 INLTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKI 142
I EK+ ++ ++ K+ A EA I+ A+ E +Q ARE+L +++ LA+K AE+I
Sbjct: 76 IADAEKRAQMTADEIKQNAQAEAARIIAQAKAEAEQQTVRARESLRDQVAVLAVKGAEQI 135
Query: 143 LNNKITIEVNSSLLNQLKIEL 163
L ++ +V++ LLNQLK EL
Sbjct: 136 LKREVNAQVHADLLNQLKAEL 156
>sp|B2JJK3|ATPF_BURP8 ATP synthase subunit b OS=Burkholderia phymatum (strain DSM 17167 /
STM815) GN=atpF PE=3 SV=1
Length = 156
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 84/141 (59%)
Query: 23 IKCCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNR 82
I FT KF+WPPLI ALD+R KKIAD L+AA K ++ KR+ +EL E + R
Sbjct: 16 ILAWFTMKFVWPPLINALDERSKKIADGLSAAEKGKLELEAAHKRVDQELSQARNEGQQR 75
Query: 83 INLTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKI 142
I EK+ + ++ K +A EA I+ A+ + +QI ARE L E+ LA+K AE+I
Sbjct: 76 IADAEKRAVAVADEIKAQAQAEAARIIAQAKADADQQIVKAREALRGEVAALAVKGAEQI 135
Query: 143 LNNKITIEVNSSLLNQLKIEL 163
L ++ ++ LLNQLK EL
Sbjct: 136 LKREVDQAAHADLLNQLKAEL 156
>sp|B3R7L9|ATPF_CUPTR ATP synthase subunit b OS=Cupriavidus taiwanensis (strain R1 / LMG
19424) GN=atpF PE=3 SV=1
Length = 156
Score = 106 bits (264), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 84/141 (59%)
Query: 23 IKCCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNR 82
I KFIWPPL+KALD+R KKIAD LAAA K ++ KR+ + + E R
Sbjct: 16 ILWWVVAKFIWPPLVKALDERAKKIADGLAAAEKGKAELELANKRVDQAMAEARTEGAQR 75
Query: 83 INLTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKI 142
+ EK+ +L ++ K+ A EA I+ A+ E +Q ARE L +++ LA+K AE+I
Sbjct: 76 VADAEKRAQLTADEIKQNAQAEAARIIAQAKAEAEQQATRAREALRDQVAVLAVKGAEQI 135
Query: 143 LNNKITIEVNSSLLNQLKIEL 163
L ++ +V++ LLNQLK EL
Sbjct: 136 LKREVNAQVHADLLNQLKAEL 156
>sp|A1WF54|ATPF_VEREI ATP synthase subunit b OS=Verminephrobacter eiseniae (strain
EF01-2) GN=atpF PE=3 SV=1
Length = 156
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 91/141 (64%)
Query: 23 IKCCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNR 82
I FT +F+WPP+ KALD+R +KIAD LAAA+ K ++S +R++KEL E R
Sbjct: 16 ILVWFTMQFVWPPIAKALDERAQKIADGLAAADRAKSELSAANQRVEKELSQARNETAAR 75
Query: 83 INLTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKI 142
+ E++ + IIE++K +ATEE N ++ AR E +Q+ ARE L ++ LA+K AE+I
Sbjct: 76 LADAERRAQAIIEEAKARATEEGNKLVAAARAEAEQQMVQAREALRAQVAVLAVKGAEQI 135
Query: 143 LNNKITIEVNSSLLNQLKIEL 163
L ++ V++ LL +L+ EL
Sbjct: 136 LRKEVDAGVHAGLLRRLQTEL 156
>sp|A1TJ37|ATPF_ACIAC ATP synthase subunit b OS=Acidovorax citrulli (strain AAC00-1)
GN=atpF PE=3 SV=1
Length = 156
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/141 (43%), Positives = 91/141 (64%)
Query: 23 IKCCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNR 82
I FT KF+WPP+ KALD+R +KIA+ LAAA+ K ++ +R++ EL T E +R
Sbjct: 16 ILVLFTMKFVWPPIAKALDERAQKIAEGLAAADRAKSELVAVNQRVETELAQTRNETASR 75
Query: 83 INLTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKI 142
+ E++ + IIE++K +ATEE N I+ AR E +Q ARE L ++ LA+K AE+I
Sbjct: 76 LADAERRAQAIIEEAKARATEEGNKIVAAARAEAEQQTIQAREALREQVAALAVKGAEQI 135
Query: 143 LNNKITIEVNSSLLNQLKIEL 163
L ++ V++ LLN+LK EL
Sbjct: 136 LRKEVNAGVHADLLNRLKTEL 156
>sp|A1VIU8|ATPF_POLNA ATP synthase subunit b OS=Polaromonas naphthalenivorans (strain
CJ2) GN=atpF PE=3 SV=1
Length = 156
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 90/141 (63%)
Query: 23 IKCCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNR 82
I FT KF+WPP+ KALD+R +KIAD LAAA+ K ++S KR++ EL + E R
Sbjct: 16 ILVWFTMKFVWPPITKALDERAQKIADGLAAADKAKSELSSANKRVEAELATSRTETATR 75
Query: 83 INLTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKI 142
+ +++ + IIE +K +A EEAN I+ A+ E +Q ARE L ++ LA+K AE+I
Sbjct: 76 LADADRRGQGIIEDAKARAVEEANKIIAAAQAEAAQQSVKAREALREQVALLAVKGAEQI 135
Query: 143 LNNKITIEVNSSLLNQLKIEL 163
L ++ V++ LL++LK EL
Sbjct: 136 LRKEVNAGVHADLLSRLKTEL 156
>sp|A1W2T3|ATPF_ACISJ ATP synthase subunit b OS=Acidovorax sp. (strain JS42) GN=atpF PE=3
SV=1
Length = 156
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 91/141 (64%)
Query: 23 IKCCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNR 82
I FT KF+WPP+ KALD+R +KIAD LAAA+ K +++ +R+++EL A E R
Sbjct: 16 ILVLFTMKFVWPPITKALDERAQKIADGLAAADRAKTELAAADQRVKQELAAASNEIATR 75
Query: 83 INLTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKI 142
+ E++ + IIE++K +A +E N I+ AR E +Q ARE L ++ LA+K AE+I
Sbjct: 76 LADAERRAQAIIEEAKARANDEGNKIVAAARAEAEQQAIQAREALREQVAALAVKGAEQI 135
Query: 143 LNNKITIEVNSSLLNQLKIEL 163
L ++ V++ LLN+LK EL
Sbjct: 136 LRKEVNAGVHADLLNRLKTEL 156
>sp|Q8XU72|ATPF_RALSO ATP synthase subunit b 1 OS=Ralstonia solanacearum (strain GMI1000)
GN=atpF PE=3 SV=1
Length = 156
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/141 (40%), Positives = 85/141 (60%)
Query: 23 IKCCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNR 82
I KFIWPPL+KALD+R KKIAD LAAA+ K ++ KR+++ L E R
Sbjct: 16 ILWWVVAKFIWPPLVKALDERAKKIADGLAAADKGKAELELANKRVEQALTEARTEGAQR 75
Query: 83 INLTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKI 142
I EK+ ++ ++ K+ A EA I+ A+ E +Q RE+L +++ LA+K AE+I
Sbjct: 76 IADAEKRAQMTADEIKQNAQAEAARIVAQAKAEAEQQAVRVRESLRDQVAVLAVKGAEQI 135
Query: 143 LNNKITIEVNSSLLNQLKIEL 163
L ++ +V++ LL QLK EL
Sbjct: 136 LKREVNAQVHADLLTQLKAEL 156
>sp|A6T474|ATPF_JANMA ATP synthase subunit b OS=Janthinobacterium sp. (strain Marseille)
GN=atpF PE=3 SV=1
Length = 156
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 90/141 (63%)
Query: 23 IKCCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNR 82
I FT KF+WPPL+ ALD+R KKIAD LAAA K ++ KR Q EL + E + R
Sbjct: 16 ILAGFTMKFVWPPLMNALDERAKKIADGLAAAERGKSDLAVAEKRAQAELASAQEAGQKR 75
Query: 83 INLTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKI 142
I+ EK+ + IIE++KK A EEA IL A+ + +Q+ RE L +++ LA+K AE+I
Sbjct: 76 ISDAEKRGQSIIEEAKKTAAEEAARILAAAKADADQQVTQVREALRDQVATLAVKGAEQI 135
Query: 143 LNNKITIEVNSSLLNQLKIEL 163
L ++ V++ LLNQLK EL
Sbjct: 136 LKREVNATVHADLLNQLKAEL 156
>sp|A4SUT0|ATPF_POLSQ ATP synthase subunit b OS=Polynucleobacter necessarius subsp.
asymbioticus (strain DSM 18221 / CIP 109841 /
QLW-P1DMWA-1) GN=atpF PE=3 SV=1
Length = 156
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 80/134 (59%)
Query: 30 KFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRINLTEKQ 89
+F+WPPL+KALD+R KIAD LAAA KE ++ ++EL +E R+ EK+
Sbjct: 23 RFVWPPLVKALDERSSKIADGLAAAERGKEALALASNEAEQELTKARQEGVQRVAEAEKR 82
Query: 90 CKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILNNKITI 149
++ ++ + A EA I+ A+ + +Q+ ARE L E+ LA+K AE+IL ++
Sbjct: 83 AQMSADEIRANAQAEAARIITQAKQDADQQVTSAREVLRAEVAVLAVKGAEQILRREVDA 142
Query: 150 EVNSSLLNQLKIEL 163
+ + LL+QLK EL
Sbjct: 143 KAHGQLLDQLKAEL 156
>sp|Q3SF62|ATPF_THIDA ATP synthase subunit b OS=Thiobacillus denitrificans (strain ATCC
25259) GN=atpF PE=3 SV=1
Length = 156
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 80/139 (57%)
Query: 25 CCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRIN 84
F+ KF+WPP++ AL+ RKK+IAD LAAA+ K ++ K+ + + I
Sbjct: 18 VWFSMKFVWPPIMNALETRKKQIADGLAAADRGKHELELAAKKAGDNMRDAKAQAAEVIA 77
Query: 85 LTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILN 144
EK+ I+E++K A EE + L A+ I ++ N ARE L ++ LA+ AEKIL
Sbjct: 78 QAEKRAAQIVEEAKLAAKEEGDRQLAAAQANIEQEANRAREGLREQVAALAVAGAEKILR 137
Query: 145 NKITIEVNSSLLNQLKIEL 163
++ + ++ LL+QLK EL
Sbjct: 138 REVNAQTHADLLSQLKAEL 156
>sp|Q6FFK4|ATPF_ACIAD ATP synthase subunit b OS=Acinetobacter sp. (strain ADP1) GN=atpF
PE=3 SV=1
Length = 156
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 84/148 (56%)
Query: 16 SHGIRRTIKCCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIAT 75
I I F KF+WPPLI A+ +R++KIAD L AA K ++ + ++++EL A
Sbjct: 9 GQAIAFAIFVAFCMKFVWPPLINAISERQRKIADGLNAAEKAKADLADAQAQVKQELDAA 68
Query: 76 HEENKNRINLTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLA 135
+ I ++ +IE+++ +AT E I ++ + ++IN ARE L ++ LA
Sbjct: 69 KAQAAQLIEQANRRAAQLIEEARTQATAEGERIRQQSKETVDQEINAAREELRQQVAALA 128
Query: 136 IKSAEKILNNKITIEVNSSLLNQLKIEL 163
+ AEKILN ++ + ++++L QL +L
Sbjct: 129 VDGAEKILNQQVDQQAHAAMLEQLAAKL 156
>sp|Q1Q895|ATPF_PSYCK ATP synthase subunit b OS=Psychrobacter cryohalolentis (strain K5)
GN=atpF PE=3 SV=1
Length = 156
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 83/148 (56%)
Query: 16 SHGIRRTIKCCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIAT 75
I I F KF+WPPLI A++DR++KIA+ L AA K ++ + +Q+EL
Sbjct: 9 GQAIAFAIFVMFCMKFVWPPLIGAINDRQRKIAEGLNAAEKAKADLATAERDVQQELDLA 68
Query: 76 HEENKNRINLTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLA 135
+ I K ++E +K +A E I A+ I ++IN ARE+L ++ LA
Sbjct: 69 KTKAAALIEQANKSANQLVEDAKSQAQVEGERIRQQAQASIDQEINQARESLRAQVAELA 128
Query: 136 IKSAEKILNNKITIEVNSSLLNQLKIEL 163
+ AEKIL +K+ ++ ++S+L+QL +L
Sbjct: 129 VLGAEKILQDKVDVQKHASMLDQLAAKL 156
>sp|Q4FQ33|ATPF_PSYA2 ATP synthase subunit b OS=Psychrobacter arcticus (strain DSM 17307
/ 273-4) GN=atpF PE=3 SV=1
Length = 156
Score = 90.9 bits (224), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 83/148 (56%)
Query: 16 SHGIRRTIKCCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIAT 75
I I F KF+WPPLI A++DR++KIA+ L AA K ++ + +Q+EL
Sbjct: 9 GQAIAFAIFVMFCMKFVWPPLIGAINDRQRKIAEGLNAAEKAKADLATAERDVQQELDLA 68
Query: 76 HEENKNRINLTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLA 135
+ I K ++E +K +A E I A+ I ++IN ARE+L ++ LA
Sbjct: 69 KTKAAALIEQANKSANQLVEDAKSQAQVEGERIRQQAQAAIDQEINQARESLRAQVAELA 128
Query: 136 IKSAEKILNNKITIEVNSSLLNQLKIEL 163
+ AEKIL +K+ ++ ++S+L+QL +L
Sbjct: 129 VLGAEKILQDKVDVQKHASMLDQLAAKL 156
>sp|B1XSD0|ATPF_POLNS ATP synthase subunit b OS=Polynucleobacter necessarius subsp.
necessarius (strain STIR1) GN=atpF PE=3 SV=1
Length = 156
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 80/134 (59%)
Query: 30 KFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRINLTEKQ 89
+F+WPPL+KALD+R KIAD LAAA KE ++ ++EL +E R+ EK+
Sbjct: 23 RFVWPPLVKALDERSSKIADGLAAAERGKEALALASNEAEQELNKARQEGVQRVAEAEKR 82
Query: 90 CKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILNNKITI 149
++ E+ + A EA ++ A+ + +Q+ ARE L E+ LA+K AE+IL ++
Sbjct: 83 AQMSAEEIRANAQAEAARVISQAQQDAAQQVTRAREVLRAEVAVLAVKGAEQILRREVDA 142
Query: 150 EVNSSLLNQLKIEL 163
+ + LL+QLK EL
Sbjct: 143 KAHGQLLDQLKAEL 156
>sp|A1WZT5|ATPF_HALHL ATP synthase subunit b OS=Halorhodospira halophila (strain DSM 244
/ SL1) GN=atpF PE=3 SV=2
Length = 156
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 90/153 (58%), Gaps = 2/153 (1%)
Query: 13 GAHSHG--IRRTIKCCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQK 70
GA G I + FT KF+WPP+ +AL DR+K+IAD LAA KE++ + ++
Sbjct: 4 GATFWGPMISFALFVWFTMKFVWPPIQQALADRQKQIADGLAAGERGKEELDKAQAEVEA 63
Query: 71 ELIATHEENKNRINLTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNE 130
L E+ IN K+ +IE+++ +A EA+ IL +AR EI ++I ARE+L +
Sbjct: 64 MLRDAREQASQIINQANKRQAEMIEEARAEARSEADRILASAREEIDQEIQRAREDLRKQ 123
Query: 131 IVNLAIKSAEKILNNKITIEVNSSLLNQLKIEL 163
+ +A++++ +IL ++ + + L+++L ++
Sbjct: 124 VSTIAVQASSQILKREVDAKAHKDLIDELATQI 156
>sp|B0VBP7|ATPF_ACIBY ATP synthase subunit b OS=Acinetobacter baumannii (strain AYE)
GN=atpF PE=3 SV=1
Length = 156
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 81/134 (60%)
Query: 30 KFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRINLTEKQ 89
KF+WPPLI A+ +R++KIAD L AA K ++ + ++++EL A + I ++
Sbjct: 23 KFVWPPLINAISERQRKIADGLNAAEKAKADLADAQAQVKQELDAAKAQAAQLIEQANRR 82
Query: 90 CKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILNNKITI 149
+IE+++ +A E I A+ + ++IN ARE L ++ LA+ AEKILN ++
Sbjct: 83 AAQLIEEARTQAAAEGERIRQQAKEAVDQEINSAREELRQQVAALAVTGAEKILNQQVDA 142
Query: 150 EVNSSLLNQLKIEL 163
E ++++L+QL +L
Sbjct: 143 EAHNAMLSQLAAKL 156
>sp|A3M140|ATPF_ACIBT ATP synthase subunit b OS=Acinetobacter baumannii (strain ATCC
17978 / NCDC KC 755) GN=atpF PE=3 SV=2
Length = 156
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 81/134 (60%)
Query: 30 KFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRINLTEKQ 89
KF+WPPLI A+ +R++KIAD L AA K ++ + ++++EL A + I ++
Sbjct: 23 KFVWPPLINAISERQRKIADGLNAAEKAKADLADAQAQVKQELDAAKAQAAQLIEQANRR 82
Query: 90 CKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILNNKITI 149
+IE+++ +A E I A+ + ++IN ARE L ++ LA+ AEKILN ++
Sbjct: 83 AAQLIEEARTQAAAEGERIRQQAKEAVDQEINSAREELRQQVAALAVTGAEKILNQQVDA 142
Query: 150 EVNSSLLNQLKIEL 163
E ++++L+QL +L
Sbjct: 143 EAHNAMLSQLAAKL 156
>sp|B2I0Z8|ATPF_ACIBC ATP synthase subunit b OS=Acinetobacter baumannii (strain ACICU)
GN=atpF PE=3 SV=1
Length = 156
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 81/134 (60%)
Query: 30 KFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRINLTEKQ 89
KF+WPPLI A+ +R++KIAD L AA K ++ + ++++EL A + I ++
Sbjct: 23 KFVWPPLINAISERQRKIADGLNAAEKAKADLADAQAQVKQELDAAKAQAAQLIEQANRR 82
Query: 90 CKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILNNKITI 149
+IE+++ +A E I A+ + ++IN ARE L ++ LA+ AEKILN ++
Sbjct: 83 AAQLIEEARTQAAAEGERIRQQAKEAVDQEINSAREELRQQVAALAVTGAEKILNQQVDA 142
Query: 150 EVNSSLLNQLKIEL 163
E ++++L+QL +L
Sbjct: 143 EAHNAMLSQLAAKL 156
>sp|B7I1W0|ATPF_ACIB5 ATP synthase subunit b OS=Acinetobacter baumannii (strain AB0057)
GN=atpF PE=3 SV=1
Length = 156
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 81/134 (60%)
Query: 30 KFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRINLTEKQ 89
KF+WPPLI A+ +R++KIAD L AA K ++ + ++++EL A + I ++
Sbjct: 23 KFVWPPLINAISERQRKIADGLNAAEKAKADLADAQAQVKQELDAAKAQAAQLIEQANRR 82
Query: 90 CKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILNNKITI 149
+IE+++ +A E I A+ + ++IN ARE L ++ LA+ AEKILN ++
Sbjct: 83 AAQLIEEARTQAAAEGERIRQQAKEAVDQEINSAREELRQQVAALAVTGAEKILNQQVDA 142
Query: 150 EVNSSLLNQLKIEL 163
E ++++L+QL +L
Sbjct: 143 EAHNAMLSQLAAKL 156
>sp|B7H298|ATPF_ACIB3 ATP synthase subunit b OS=Acinetobacter baumannii (strain
AB307-0294) GN=atpF PE=3 SV=1
Length = 156
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 81/134 (60%)
Query: 30 KFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRINLTEKQ 89
KF+WPPLI A+ +R++KIAD L AA K ++ + ++++EL A + I ++
Sbjct: 23 KFVWPPLINAISERQRKIADGLNAAEKAKADLADAQAQVKQELDAAKAQAAQLIEQANRR 82
Query: 90 CKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILNNKITI 149
+IE+++ +A E I A+ + ++IN ARE L ++ LA+ AEKILN ++
Sbjct: 83 AAQLIEEARTQAAAEGERIRQQAKEAVDQEINSAREELRQQVAALAVTGAEKILNQQVDA 142
Query: 150 EVNSSLLNQLKIEL 163
E ++++L+QL +L
Sbjct: 143 EAHNAMLSQLAAKL 156
>sp|A9HY36|ATPF_BORPD ATP synthase subunit b OS=Bordetella petrii (strain ATCC BAA-461 /
DSM 12804 / CCUG 43448) GN=atpF PE=3 SV=1
Length = 156
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 84/138 (60%)
Query: 26 CFTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRINL 85
FT KF+WPPL KA+D+R++KIAD LAAA K ++ + R+ + EN RI
Sbjct: 19 WFTMKFVWPPLTKAMDERRQKIADGLAAAEKGKADLAQAQARVSLIEASAKSENHARIIE 78
Query: 86 TEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILNN 145
EKQ +IE+++++A E I+ A + +++ AR+ L +++ LA+K AE+IL
Sbjct: 79 AEKQAASLIEQARREAEAERARIVAQAAQDAAQEVQRARDALRDDVAALAVKGAEQILKR 138
Query: 146 KITIEVNSSLLNQLKIEL 163
++ ++ LLNQLK +L
Sbjct: 139 EVDARAHAELLNQLKAQL 156
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.353
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,287,404
Number of Sequences: 539616
Number of extensions: 1841969
Number of successful extensions: 12284
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 456
Number of HSP's successfully gapped in prelim test: 321
Number of HSP's that attempted gapping in prelim test: 11376
Number of HSP's gapped (non-prelim): 1037
length of query: 163
length of database: 191,569,459
effective HSP length: 108
effective length of query: 55
effective length of database: 133,290,931
effective search space: 7331001205
effective search space used: 7331001205
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)