Your job contains 1 sequence.
>psy2889
MGLIYAIQSADTGAHSHGIRRTIKCCFTKKFIWPPLIKALDDRKKKIADILAAANSEKEK
VSYDRKRIQKELIATHEENKNRINLTEKQCKLIIEKSKKKATEEANIILYNARVEIIKQI
NIARENLHNEIVNLAIKSAEKILNNKITIEVNSSLLNQLKIEL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2889
(163 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q9KNH1 - symbol:atpF "ATP synthase subunit b" s... 202 2.9e-16 1
TIGR_CMR|VC_2768 - symbol:VC_2768 "ATP synthase F0, B sub... 202 2.9e-16 1
TIGR_CMR|CBU_1941 - symbol:CBU_1941 "ATP synthase F0, B s... 199 6.0e-16 1
TIGR_CMR|CPS_0058 - symbol:CPS_0058 "ATP synthase F0, B s... 186 1.4e-14 1
UNIPROTKB|P0ABA0 - symbol:atpF species:83333 "Escherichia... 182 3.8e-14 1
TIGR_CMR|SO_4751 - symbol:SO_4751 "ATP synthase F0, B sub... 181 4.9e-14 1
TIGR_CMR|CHY_2549 - symbol:CHY_2549 "ATP synthase F0, B s... 145 3.2e-10 1
TIGR_CMR|DET_0560 - symbol:DET_0560 "ATP synthase F0, B s... 113 3.2e-06 1
TIGR_CMR|BA_5551 - symbol:BA_5551 "ATP synthase F0, B sub... 100 0.00048 1
UNIPROTKB|P07951 - symbol:TPM2 "Tropomyosin beta chain" s... 103 0.00089 1
ZFIN|ZDB-GENE-990415-269 - symbol:tpma "alpha-tropomyosin... 103 0.00089 1
>UNIPROTKB|Q9KNH1 [details] [associations]
symbol:atpF "ATP synthase subunit b" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0015986 "ATP synthesis
coupled proton transport" evidence=ISS] [GO:0045264 "plasma
membrane proton-transporting ATP synthase complex, coupling factor
F(o)" evidence=ISS] [GO:0046933 "proton-transporting ATP synthase
activity, rotational mechanism" evidence=ISS] HAMAP:MF_01398
InterPro:IPR002146 InterPro:IPR005864 Pfam:PF00430 GO:GO:0016021
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0046933 GO:GO:0015986
GO:GO:0045264 KO:K02109 TIGRFAMs:TIGR01144 eggNOG:COG0711
ProtClustDB:PRK05759 OMA:VLPKFQE PIR:B82037 RefSeq:NP_232394.1
ProteinModelPortal:Q9KNH1 SMR:Q9KNH1 DNASU:2614945 GeneID:2614945
KEGG:vch:VC2768 PATRIC:20084582 Uniprot:Q9KNH1
Length = 156
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 46/137 (33%), Positives = 73/137 (53%)
Query: 27 FTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRINLT 86
F K++WPP+IKA++DR+KKIAD L AA K+ + + +L I
Sbjct: 20 FCMKYVWPPIIKAIEDRQKKIADGLQAAERAKKDLDLAQANASDQLKEAKRTATELIEQA 79
Query: 87 EKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILNNK 146
K+ II++++++A E IL A EI + N AR+ L ++ LAI AEKIL
Sbjct: 80 NKRKAQIIDEAREEAQAERQKILTQAEAEIEAERNRARDELRKQVATLAIAGAEKILERS 139
Query: 147 ITIEVNSSLLNQLKIEL 163
I + + +L+ + +L
Sbjct: 140 IDKDTHKDILDNITAKL 156
>TIGR_CMR|VC_2768 [details] [associations]
symbol:VC_2768 "ATP synthase F0, B subunit" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0015986 "ATP synthesis
coupled proton transport" evidence=ISS] [GO:0045264 "plasma
membrane proton-transporting ATP synthase complex, coupling factor
F(o)" evidence=ISS] [GO:0046933 "proton-transporting ATP synthase
activity, rotational mechanism" evidence=ISS] HAMAP:MF_01398
InterPro:IPR002146 InterPro:IPR005864 Pfam:PF00430 GO:GO:0016021
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0046933 GO:GO:0015986
GO:GO:0045264 KO:K02109 TIGRFAMs:TIGR01144 eggNOG:COG0711
ProtClustDB:PRK05759 OMA:VLPKFQE PIR:B82037 RefSeq:NP_232394.1
ProteinModelPortal:Q9KNH1 SMR:Q9KNH1 DNASU:2614945 GeneID:2614945
KEGG:vch:VC2768 PATRIC:20084582 Uniprot:Q9KNH1
Length = 156
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 46/137 (33%), Positives = 73/137 (53%)
Query: 27 FTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRINLT 86
F K++WPP+IKA++DR+KKIAD L AA K+ + + +L I
Sbjct: 20 FCMKYVWPPIIKAIEDRQKKIADGLQAAERAKKDLDLAQANASDQLKEAKRTATELIEQA 79
Query: 87 EKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILNNK 146
K+ II++++++A E IL A EI + N AR+ L ++ LAI AEKIL
Sbjct: 80 NKRKAQIIDEAREEAQAERQKILTQAEAEIEAERNRARDELRKQVATLAIAGAEKILERS 139
Query: 147 ITIEVNSSLLNQLKIEL 163
I + + +L+ + +L
Sbjct: 140 IDKDTHKDILDNITAKL 156
>TIGR_CMR|CBU_1941 [details] [associations]
symbol:CBU_1941 "ATP synthase F0, B subunit"
species:227377 "Coxiella burnetii RSA 493" [GO:0015986 "ATP
synthesis coupled proton transport" evidence=ISS] [GO:0045264
"plasma membrane proton-transporting ATP synthase complex, coupling
factor F(o)" evidence=ISS] [GO:0046933 "proton-transporting ATP
synthase activity, rotational mechanism" evidence=ISS]
HAMAP:MF_01398 InterPro:IPR002146 InterPro:IPR005864 Pfam:PF00430
GO:GO:0016021 GO:GO:0005886 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0015986 GO:GO:0015078 GO:GO:0045263 KO:K02109
TIGRFAMs:TIGR01144 eggNOG:COG0711 OMA:NPGLIFW ProtClustDB:PRK05759
HOGENOM:HOG000015378 RefSeq:NP_820917.1 ProteinModelPortal:Q83AF9
GeneID:1209854 KEGG:cbu:CBU_1941 PATRIC:17932621
BioCyc:CBUR227377:GJ7S-1915-MONOMER Uniprot:Q83AF9
Length = 156
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 45/136 (33%), Positives = 78/136 (57%)
Query: 28 TKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRINLTE 87
T KFIWPPL KAL+ R+K IAD LAAA ++++ + +++L + + I
Sbjct: 21 TMKFIWPPLTKALEARRKNIADGLAAAEEGRKELELAEIKSKEQLTEAKTQAAHIIEQAN 80
Query: 88 KQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILNNKI 147
++ I+E++K KA EE ++ A+ EI ++ N A+ L +I +A+ A+KIL ++
Sbjct: 81 QRANHIVEEAKNKAREEGAHLIQLAKNEIEQEYNAAKTELLKQISTIAVAGAQKILQREV 140
Query: 148 TIEVNSSLLNQLKIEL 163
N L+++L E+
Sbjct: 141 DKASNDRLVDELVSEI 156
>TIGR_CMR|CPS_0058 [details] [associations]
symbol:CPS_0058 "ATP synthase F0, B subunit"
species:167879 "Colwellia psychrerythraea 34H" [GO:0015986 "ATP
synthesis coupled proton transport" evidence=ISS] [GO:0045264
"plasma membrane proton-transporting ATP synthase complex, coupling
factor F(o)" evidence=ISS] [GO:0046933 "proton-transporting ATP
synthase activity, rotational mechanism" evidence=ISS]
HAMAP:MF_01398 InterPro:IPR002146 InterPro:IPR005864 Pfam:PF00430
GO:GO:0016021 GO:GO:0005886 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0015986 GO:GO:0015078 GO:GO:0045263 KO:K02109
TIGRFAMs:TIGR01144 eggNOG:COG0711 OMA:NPGLIFW RefSeq:YP_266826.1
ProteinModelPortal:Q48AW4 SMR:Q48AW4 STRING:Q48AW4 GeneID:3520511
KEGG:cps:CPS_0058 PATRIC:21463541 HOGENOM:HOG000015378
BioCyc:CPSY167879:GI48-161-MONOMER Uniprot:Q48AW4
Length = 156
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 44/137 (32%), Positives = 75/137 (54%)
Query: 27 FTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRINLT 86
F K++WPP+I A++DR+ IAD LAA++ + + +++ +L + + ++
Sbjct: 20 FCMKYVWPPIIGAIEDRQATIADGLAASDRAAKDLELAQEKATAQLKEAKVQAASIVDAA 79
Query: 87 EKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILNNK 146
+K I++++ KA E IL + EI + N A+E L E+ LAI AEKIL
Sbjct: 80 KKHEAKIVDEAAGKAQVEKERILASGHAEIETERNRAKEELRKEVAVLAIAGAEKILERS 139
Query: 147 ITIEVNSSLLNQLKIEL 163
I +S +L++L EL
Sbjct: 140 IDAAAHSDILDKLVAEL 156
>UNIPROTKB|P0ABA0 [details] [associations]
symbol:atpF species:83333 "Escherichia coli K-12"
[GO:0031225 "anchored to membrane" evidence=IDA] [GO:0046961
"proton-transporting ATPase activity, rotational mechanism"
evidence=IMP] [GO:0045263 "proton-transporting ATP synthase
complex, coupling factor F(o)" evidence=IEA;IMP] [GO:0015992
"proton transport" evidence=IEA] [GO:0015986 "ATP synthesis coupled
proton transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0006754
"ATP biosynthetic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0046933 "proton-transporting ATP synthase
activity, rotational mechanism" evidence=IMP] HAMAP:MF_01398
InterPro:IPR002146 InterPro:IPR005864 Pfam:PF00430 GO:GO:0016021
GO:GO:0005886 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0031225 EMBL:L10328 GO:GO:0046933
GO:GO:0046961 GO:GO:0015986 GO:GO:0045263 EMBL:J01594 EMBL:X01631
EMBL:V00264 EMBL:V00266 EMBL:V00310 EMBL:M25464 TCDB:3.A.2.1.1
EMBL:M12212 KO:K02109 TIGRFAMs:TIGR01144 eggNOG:COG0711
ProtClustDB:PRK05759 HOGENOM:HOG000015378 EMBL:M10422 PIR:D93732
RefSeq:NP_418192.1 RefSeq:YP_491693.1 PDB:1B9U PDB:1L2P PDB:2KHK
PDBsum:1B9U PDBsum:1L2P PDBsum:2KHK ProteinModelPortal:P0ABA0
SMR:P0ABA0 DIP:DIP-35994N IntAct:P0ABA0 SWISS-2DPAGE:P0ABA0
PRIDE:P0ABA0 EnsemblBacteria:EBESCT00000005030
EnsemblBacteria:EBESCT00000005031 EnsemblBacteria:EBESCT00000005032
EnsemblBacteria:EBESCT00000017978 GeneID:12933115 GeneID:948247
KEGG:ecj:Y75_p3432 KEGG:eco:b3736 PATRIC:32122969 EchoBASE:EB0101
EcoGene:EG10103 OMA:VLPKFQE BioCyc:EcoCyc:ATPF-MONOMER
BioCyc:ECOL316407:JW3714-MONOMER BioCyc:MetaCyc:ATPF-MONOMER
EvolutionaryTrace:P0ABA0 Genevestigator:P0ABA0 Uniprot:P0ABA0
Length = 156
Score = 182 (69.1 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 42/137 (30%), Positives = 74/137 (54%)
Query: 27 FTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRINLT 86
F K++WPPL+ A++ R+K+IAD LA+A + + + +L E + I
Sbjct: 20 FCMKYVWPPLMAAIEKRQKEIADGLASAERAHKDLDLAKASATDQLKKAKAEAQVIIEQA 79
Query: 87 EKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILNNK 146
K+ I++++K +A +E I+ A+ EI + ARE L ++ LA+ AEKI+
Sbjct: 80 NKRRSQILDEAKAEAEQERTKIVAQAQAEIEAERKRAREELRKQVAILAVAGAEKIIERS 139
Query: 147 ITIEVNSSLLNQLKIEL 163
+ NS ++++L EL
Sbjct: 140 VDEAANSDIVDKLVAEL 156
>TIGR_CMR|SO_4751 [details] [associations]
symbol:SO_4751 "ATP synthase F0, B subunit" species:211586
"Shewanella oneidensis MR-1" [GO:0015986 "ATP synthesis coupled
proton transport" evidence=ISS] [GO:0045264 "plasma membrane
proton-transporting ATP synthase complex, coupling factor F(o)"
evidence=ISS] [GO:0046933 "proton-transporting ATP synthase
activity, rotational mechanism" evidence=ISS] HAMAP:MF_01398
InterPro:IPR002146 InterPro:IPR005864 Pfam:PF00430 GO:GO:0016021
GO:GO:0005886 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0015986
GO:GO:0015078 GO:GO:0045263 KO:K02109 TIGRFAMs:TIGR01144
eggNOG:COG0711 OMA:NPGLIFW ProtClustDB:PRK05759
HOGENOM:HOG000015378 RefSeq:NP_720267.1 ProteinModelPortal:Q8E8B6
SMR:Q8E8B6 GeneID:1172327 KEGG:son:SO_4751 PATRIC:23529171
Uniprot:Q8E8B6
Length = 156
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 43/137 (31%), Positives = 72/137 (52%)
Query: 27 FTKKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRINLT 86
F KF+WPPL+ A++ R+K+IAD LA A+ + + + + +L I
Sbjct: 20 FCMKFVWPPLMNAIEARQKRIADGLADADRAVKDLELAQAKATDQLKEAKVTANEIIEQA 79
Query: 87 EKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILNNK 146
K+ I+E++K +A E I+ + EI + N +E+L ++ LAI AEKIL
Sbjct: 80 NKRKAQIVEEAKTEADAERAKIIAQGKAEIEAERNRVKEDLRKQVATLAIMGAEKILERS 139
Query: 147 ITIEVNSSLLNQLKIEL 163
I +S ++N+L E+
Sbjct: 140 IDPAAHSDIVNKLVAEI 156
>TIGR_CMR|CHY_2549 [details] [associations]
symbol:CHY_2549 "ATP synthase F0, B subunit"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0015986 "ATP synthesis coupled proton transport" evidence=ISS]
[GO:0045264 "plasma membrane proton-transporting ATP synthase
complex, coupling factor F(o)" evidence=ISS] [GO:0046933
"proton-transporting ATP synthase activity, rotational mechanism"
evidence=ISS] HAMAP:MF_01398 InterPro:IPR002146 InterPro:IPR005864
Pfam:PF00430 GO:GO:0016021 GO:GO:0005886 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0015986 GO:GO:0015078 GO:GO:0045263
KO:K02109 TIGRFAMs:TIGR01144 eggNOG:COG0711 HOGENOM:HOG000015377
RefSeq:YP_361342.1 STRING:Q3A942 GeneID:3726953 KEGG:chy:CHY_2549
PATRIC:21278145 OMA:FVWPPIV ProtClustDB:CLSK741877
BioCyc:CHYD246194:GJCN-2548-MONOMER Uniprot:Q3A942
Length = 159
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 38/135 (28%), Positives = 67/135 (49%)
Query: 29 KKFIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRINLTEK 88
K ++ P++K ++DRKK I + L A +E+ + + EE + I +K
Sbjct: 23 KILLYKPVLKTIEDRKKSIEESLEKAAKAQEEAERIKAEYDGMIAKAREEAREIIAKAQK 82
Query: 89 QCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILNNKIT 148
+ E+ A EA +L +A+ I ++ A L EI NLA+ +A KILN +T
Sbjct: 83 TAQAEKEEIIATAQREAQSLLADAKATIAQEKEKALRELRQEIGNLAVLAAGKILNRAVT 142
Query: 149 IEVNSSLLNQLKIEL 163
+E + L+++ E+
Sbjct: 143 LEDHQKLVDEFLNEV 157
>TIGR_CMR|DET_0560 [details] [associations]
symbol:DET_0560 "ATP synthase F0, B subunit"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0015986 "ATP
synthesis coupled proton transport" evidence=ISS] [GO:0045264
"plasma membrane proton-transporting ATP synthase complex, coupling
factor F(o)" evidence=ISS] [GO:0046933 "proton-transporting ATP
synthase activity, rotational mechanism" evidence=ISS]
HAMAP:MF_01398 InterPro:IPR002146 InterPro:IPR005864 Pfam:PF00430
GO:GO:0016021 GO:GO:0005886 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0015986 GO:GO:0015078 GO:GO:0045263 KO:K02109
TIGRFAMs:TIGR01144 eggNOG:COG0711 HOGENOM:HOG000015377 OMA:NPGLIFW
RefSeq:YP_181303.1 ProteinModelPortal:Q3Z8Z6 STRING:Q3Z8Z6
GeneID:3230098 KEGG:det:DET0560 PATRIC:21608189
ProtClustDB:CLSK837399 BioCyc:DETH243164:GJNF-560-MONOMER
Uniprot:Q3Z8Z6
Length = 169
Score = 113 (44.8 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 28/129 (21%), Positives = 64/129 (49%)
Query: 31 FIWPPLIKALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEENKNRINLTEKQC 90
F + P++ LD+R +I + + + KE+ + +K++ ++ + I K
Sbjct: 31 FAYKPILAKLDERSARIKESMERTDQVKEQAQRAEEEFKKKIGEASQQGQLVIERAVKTG 90
Query: 91 KLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILNNKITIE 150
I +K+ ++A EA +L AR EI ++ + + L E L I +A K+++ + +
Sbjct: 91 DEIRQKAIEEARAEAEAMLSRARTEIRQERDEVVDQLRKEFAELTILAAGKVIDQSLDKK 150
Query: 151 VNSSLLNQL 159
+ +L++ +
Sbjct: 151 AHQALIDSV 159
>TIGR_CMR|BA_5551 [details] [associations]
symbol:BA_5551 "ATP synthase F0, B subunit" species:198094
"Bacillus anthracis str. Ames" [GO:0015986 "ATP synthesis coupled
proton transport" evidence=ISS] [GO:0045264 "plasma membrane
proton-transporting ATP synthase complex, coupling factor F(o)"
evidence=ISS] [GO:0046933 "proton-transporting ATP synthase
activity, rotational mechanism" evidence=ISS] HAMAP:MF_01398
InterPro:IPR002146 InterPro:IPR005864 Pfam:PF00430 GO:GO:0016021
GO:GO:0005886 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0015986 GO:GO:0015078 GO:GO:0045263
KO:K02109 TIGRFAMs:TIGR01144 RefSeq:NP_847709.1 RefSeq:YP_022220.1
RefSeq:YP_031398.1 ProteinModelPortal:Q81JZ1 DNASU:1085236
EnsemblBacteria:EBBACT00000010947 EnsemblBacteria:EBBACT00000015531
EnsemblBacteria:EBBACT00000020107 GeneID:1085236 GeneID:2819037
GeneID:2852657 KEGG:ban:BA_5551 KEGG:bar:GBAA_5551 KEGG:bat:BAS5159
eggNOG:COG0711 HOGENOM:HOG000015377 OMA:NPGLIFW
ProtClustDB:PRK05759 BioCyc:BANT260799:GJAJ-5234-MONOMER
BioCyc:BANT261594:GJ7F-5412-MONOMER Uniprot:Q81JZ1
Length = 168
Score = 100 (40.3 bits), Expect = 0.00048, P = 0.00048
Identities = 32/131 (24%), Positives = 67/131 (51%)
Query: 29 KKFIWPPLIKALDDRKKKIADILAAA---NSEKEKVSYDRKRIQKELIATHEENKNRINL 85
+KF W PL+ + +R++ +A+ + AA N+E +K+ +++ + K+ + E + I
Sbjct: 30 RKFAWGPLMGIMKEREEHVANEIDAAERNNAEAKKLVEEQREMLKQ---SRVEAQELIER 86
Query: 86 TEKQCKLIIEKSKKKATEEANIILYNARVEIIKQINIARENLHNEIVNLAIKSAEKILNN 145
+KQ + A EEA I +A EI ++ A L ++ +L+++ A K++
Sbjct: 87 AKKQAVDQKDVIVAAAKEEAESIKASAVQEIQREKEQAIAALQEQVASLSVQIASKVIEK 146
Query: 146 KITIEVNSSLL 156
++ E L+
Sbjct: 147 ELKEEDQVKLI 157
>UNIPROTKB|P07951 [details] [associations]
symbol:TPM2 "Tropomyosin beta chain" species:9606 "Homo
sapiens" [GO:0043462 "regulation of ATPase activity" evidence=IDA]
[GO:0003779 "actin binding" evidence=IDA] [GO:0005862 "muscle thin
filament tropomyosin" evidence=TAS] [GO:0008307 "structural
constituent of muscle" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006936 "muscle contraction" evidence=TAS]
[GO:0030049 "muscle filament sliding" evidence=TAS] GO:GO:0005829
GO:GO:0003779 EMBL:CH471071 Reactome:REACT_17044 GO:GO:0030049
GO:GO:0043462 GO:GO:0008307 Orphanet:171439 Orphanet:171436
EMBL:AL133410 Orphanet:1147 Orphanet:1146 GO:GO:0005862
InterPro:IPR000533 Pfam:PF00261 PRINTS:PR00194 PROSITE:PS00326
eggNOG:NOG304012 HOVERGEN:HBG107404 OrthoDB:EOG4TXBSM CTD:7169
KO:K10374 OMA:TEPTHEC EMBL:M12126 EMBL:M12125 EMBL:X06825
EMBL:M75165 EMBL:M74817 EMBL:AK223258 EMBL:BC011776 EMBL:AF209746
EMBL:J05247 IPI:IPI00013991 IPI:IPI00218820 IPI:IPI00220709
PIR:A23562 PIR:S00922 RefSeq:NP_003280.2 RefSeq:NP_998839.1
UniGene:Hs.300772 ProteinModelPortal:P07951 SMR:P07951
IntAct:P07951 MINT:MINT-94363 STRING:P07951 PhosphoSite:P07951
DMDM:136090 DOSAC-COBS-2DPAGE:P07951
REPRODUCTION-2DPAGE:IPI00220709 UCD-2DPAGE:P07951 PaxDb:P07951
PRIDE:P07951 DNASU:7169 Ensembl:ENST00000360958
Ensembl:ENST00000378292 GeneID:7169 KEGG:hsa:7169 UCSC:uc003zxq.3
UCSC:uc003zxs.3 GeneCards:GC09M035672 HGNC:HGNC:12011 MIM:108120
MIM:190990 MIM:609285 neXtProt:NX_P07951 Orphanet:171881
PharmGKB:PA36691 ChiTaRS:TPM2 GenomeRNAi:7169 NextBio:28086
ArrayExpress:P07951 Bgee:P07951 CleanEx:HS_TPM2
Genevestigator:P07951 GermOnline:ENSG00000198467 Uniprot:P07951
Length = 284
Score = 103 (41.3 bits), Expect = 0.00089, P = 0.00089
Identities = 38/130 (29%), Positives = 76/130 (58%)
Query: 39 ALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEE-NKNRINLTEKQCKLIIEKS 97
A+D ++ AD A + K+ + +++ +QK+L T +E K ++ E Q KL E++
Sbjct: 18 AIDRAEQAEADKKQAEDRCKQ-LEEEQQALQKKLKGTEDEVEKYSESVKEAQEKL--EQA 74
Query: 98 KKKATE-EANIILYNARVEIIKQ-INIARENLHNEIVNL--AIKSAEKILNNKITIEVNS 153
+KKAT+ EA++ N R++++++ ++ A+E L + L A K+A++ IE N
Sbjct: 75 EKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIE-NR 133
Query: 154 SLLNQLKIEL 163
++ ++ K+EL
Sbjct: 134 AMKDEEKMEL 143
>ZFIN|ZDB-GENE-990415-269 [details] [associations]
symbol:tpma "alpha-tropomyosin" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] ZFIN:ZDB-GENE-990415-269 EMBL:AL845510
InterPro:IPR000533 Pfam:PF00261 PRINTS:PR00194 PROSITE:PS00326
HOVERGEN:HBG107404 IPI:IPI00508152 UniGene:Dr.47559
ProteinModelPortal:Q5SPK6 SMR:Q5SPK6 STRING:Q5SPK6
InParanoid:Q5SPK6 ArrayExpress:Q5SPK6 Uniprot:Q5SPK6
Length = 284
Score = 103 (41.3 bits), Expect = 0.00089, P = 0.00089
Identities = 41/130 (31%), Positives = 72/130 (55%)
Query: 39 ALDDRKKKIADILAAANSEKEKVSYDRKRIQKELIATHEE-NKNRINLTEKQCKLIIEKS 97
ALD ++ D AA K+ + D +QK+L AT +E +K L + Q KL E +
Sbjct: 18 ALDRAEQAETDKKAAEERSKQ-LEDDLVALQKKLKATEDELDKYSEALKDAQEKL--ELA 74
Query: 98 KKKATE-EANIILYNARVEIIKQ-INIARENLHNEIVNL--AIKSAEKILNNKITIEVNS 153
+KKAT+ E ++ N R++++++ ++ A+E L + L A K+A++ IE N
Sbjct: 75 EKKATDAEGDVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAADESERGMKVIE-NR 133
Query: 154 SLLNQLKIEL 163
+L ++ K+EL
Sbjct: 134 ALKDEEKMEL 143
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.353 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 163 163 0.00084 107 3 11 22 0.39 32
30 0.44 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 558 (59 KB)
Total size of DFA: 123 KB (2079 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 22.57u 0.13s 22.70t Elapsed: 00:00:01
Total cpu time: 22.57u 0.13s 22.70t Elapsed: 00:00:01
Start: Thu Aug 15 15:13:05 2013 End: Thu Aug 15 15:13:06 2013