Query psy2895
Match_columns 293
No_of_seqs 234 out of 2142
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 20:21:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2895.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2895hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t7v_A Methylornithine synthas 100.0 4.7E-29 1.6E-33 227.1 20.3 209 27-244 23-241 (350)
2 3iix_A Biotin synthetase, puta 100.0 2.7E-27 9.3E-32 215.1 25.2 208 27-247 15-234 (348)
3 1r30_A Biotin synthase; SAM ra 100.0 9.7E-27 3.3E-31 213.3 24.7 230 27-270 30-275 (369)
4 2qgq_A Protein TM_1862; alpha- 100.0 5.5E-27 1.9E-31 209.5 21.7 187 60-250 3-200 (304)
5 1olt_A Oxygen-independent copr 99.9 1.4E-24 4.8E-29 204.1 21.8 218 61-287 53-296 (457)
6 1tv8_A MOAA, molybdenum cofact 99.9 3.3E-20 1.1E-24 167.9 19.5 185 53-248 5-201 (340)
7 3c8f_A Pyruvate formate-lyase 99.8 5.4E-19 1.8E-23 151.8 17.2 202 60-275 19-243 (245)
8 2yx0_A Radical SAM enzyme; pre 99.7 8.5E-17 2.9E-21 145.6 17.5 189 69-270 79-304 (342)
9 2z2u_A UPF0026 protein MJ0257; 99.7 6E-16 2.1E-20 138.1 13.3 194 64-275 54-288 (311)
10 3rfa_A Ribosomal RNA large sub 99.6 1.6E-14 5.3E-19 132.5 19.3 195 65-274 119-340 (404)
11 2a5h_A L-lysine 2,3-aminomutas 99.6 3.6E-14 1.2E-18 131.5 20.7 165 64-247 118-296 (416)
12 3can_A Pyruvate-formate lyase- 99.2 5.9E-10 2E-14 91.3 16.6 157 106-275 5-178 (182)
13 4fhd_A Spore photoproduct lyas 98.5 1.5E-06 5.2E-11 78.3 12.5 159 65-231 111-282 (368)
14 2cw6_A Hydroxymethylglutaryl-C 98.1 7.5E-05 2.5E-09 65.8 13.8 145 86-240 22-176 (298)
15 1ydn_A Hydroxymethylglutaryl-C 97.8 0.00027 9.4E-09 62.0 13.4 145 87-240 22-175 (295)
16 1ydo_A HMG-COA lyase; TIM-barr 97.7 0.00093 3.2E-08 58.9 15.0 145 86-240 23-177 (307)
17 2ftp_A Hydroxymethylglutaryl-C 97.7 0.0021 7.2E-08 56.5 16.6 145 86-240 25-179 (302)
18 3ewb_X 2-isopropylmalate synth 97.6 0.0017 5.8E-08 56.9 14.7 146 86-240 22-170 (293)
19 1nvm_A HOA, 4-hydroxy-2-oxoval 97.5 0.0017 5.9E-08 58.2 14.0 138 86-239 25-168 (345)
20 3eeg_A 2-isopropylmalate synth 97.3 0.0037 1.3E-07 55.5 13.4 145 87-240 24-171 (325)
21 3ble_A Citramalate synthase fr 97.2 0.0069 2.4E-07 54.0 14.0 144 87-240 37-189 (337)
22 3ivs_A Homocitrate synthase, m 97.2 0.012 4.1E-07 54.0 15.1 142 86-240 56-200 (423)
23 3rmj_A 2-isopropylmalate synth 97.1 0.0091 3.1E-07 53.9 13.7 145 87-240 30-177 (370)
24 2ztj_A Homocitrate synthase; ( 97.0 0.035 1.2E-06 50.3 16.3 139 86-240 20-164 (382)
25 1rqb_A Transcarboxylase 5S sub 96.7 0.019 6.6E-07 54.2 12.9 137 87-240 43-195 (539)
26 2nx9_A Oxaloacetate decarboxyl 96.5 0.03 1E-06 52.0 12.8 137 87-240 26-178 (464)
27 1eye_A DHPS 1, dihydropteroate 96.0 0.33 1.1E-05 41.9 15.4 138 86-232 24-199 (280)
28 2y7e_A 3-keto-5-aminohexanoate 95.8 0.18 6.1E-06 43.6 13.1 86 87-173 30-116 (282)
29 3chv_A Prokaryotic domain of u 95.4 0.099 3.4E-06 45.2 10.1 85 87-172 30-114 (284)
30 3no5_A Uncharacterized protein 95.2 0.12 4.2E-06 44.4 9.8 61 87-147 26-86 (275)
31 2yci_X 5-methyltetrahydrofolat 95.0 1.1 3.7E-05 38.4 15.2 135 87-232 30-192 (271)
32 3tr9_A Dihydropteroate synthas 94.9 0.9 3.1E-05 39.7 14.7 138 86-231 44-223 (314)
33 2vp8_A Dihydropteroate synthas 94.8 0.22 7.6E-06 43.8 10.6 139 86-231 60-238 (318)
34 1qwg_A PSL synthase;, (2R)-pho 94.7 1.1 3.7E-05 37.8 14.0 132 88-240 23-168 (251)
35 3c6c_A 3-keto-5-aminohexanoate 94.6 0.4 1.4E-05 42.0 11.8 118 87-207 44-183 (316)
36 1aj0_A DHPS, dihydropteroate s 94.6 0.68 2.3E-05 39.9 13.1 139 86-232 33-207 (282)
37 3lot_A Uncharacterized protein 94.4 1.1 3.9E-05 39.1 14.1 85 87-172 28-116 (314)
38 3fst_A 5,10-methylenetetrahydr 94.1 2.2 7.6E-05 37.1 15.4 121 87-224 93-222 (304)
39 4e38_A Keto-hydroxyglutarate-a 94.0 2.3 8E-05 35.4 14.8 114 87-241 42-155 (232)
40 2dqw_A Dihydropteroate synthas 94.0 0.87 3E-05 39.5 12.3 138 86-232 47-219 (294)
41 2y5s_A DHPS, dihydropteroate s 93.7 0.75 2.6E-05 39.9 11.5 139 86-233 41-217 (294)
42 3e49_A Uncharacterized protein 93.5 2 6.8E-05 37.5 13.9 84 87-171 28-113 (311)
43 3e02_A Uncharacterized protein 93.4 1.7 6E-05 37.9 13.4 84 87-171 28-113 (311)
44 3apt_A Methylenetetrahydrofola 93.0 1.4 4.8E-05 38.5 12.3 113 87-215 82-208 (310)
45 1vhc_A Putative KHG/KDPG aldol 92.6 3.8 0.00013 33.9 15.1 72 87-171 25-96 (224)
46 3bg3_A Pyruvate carboxylase, m 92.4 2.7 9.1E-05 41.1 14.4 136 88-240 122-281 (718)
47 1wbh_A KHG/KDPG aldolase; lyas 92.4 3.9 0.00013 33.5 15.1 113 87-240 24-136 (214)
48 1tx2_A DHPS, dihydropteroate s 92.1 1.4 4.8E-05 38.2 10.9 138 87-232 59-226 (297)
49 3lmz_A Putative sugar isomeras 92.0 3.9 0.00013 34.0 13.6 97 153-274 32-128 (257)
50 1mxs_A KDPG aldolase; 2-keto-3 91.8 4.8 0.00017 33.3 15.1 71 88-171 35-105 (225)
51 3vnd_A TSA, tryptophan synthas 91.7 1.8 6E-05 37.0 11.0 149 124-277 3-178 (267)
52 3mcm_A 2-amino-4-hydroxy-6-hyd 91.7 0.81 2.8E-05 42.0 9.3 136 88-230 209-386 (442)
53 3lab_A Putative KDPG (2-keto-3 91.5 5.1 0.00018 33.0 15.0 119 86-241 20-140 (217)
54 1twd_A Copper homeostasis prot 91.4 3.3 0.00011 35.0 12.1 125 90-240 72-198 (256)
55 4af0_A Inosine-5'-monophosphat 91.0 2.7 9.4E-05 39.4 12.2 133 91-243 280-416 (556)
56 3ewb_X 2-isopropylmalate synth 90.6 6.9 0.00024 33.7 13.8 123 88-232 147-277 (293)
57 2cw6_A Hydroxymethylglutaryl-C 90.1 3 0.0001 36.0 11.2 124 88-231 153-281 (298)
58 3dxi_A Putative aldolase; TIM 90.1 2 6.9E-05 37.6 10.0 138 86-240 19-163 (320)
59 3nav_A Tryptophan synthase alp 90.0 3 0.0001 35.7 10.8 117 125-245 6-136 (271)
60 3p6l_A Sugar phosphate isomera 89.8 6.6 0.00023 32.5 12.9 117 140-274 10-130 (262)
61 1ydo_A HMG-COA lyase; TIM-barr 89.7 2.2 7.5E-05 37.2 10.0 124 88-231 154-282 (307)
62 3ble_A Citramalate synthase fr 89.7 2.9 0.0001 36.9 10.9 120 88-231 166-289 (337)
63 3hq1_A 2-isopropylmalate synth 89.4 4.2 0.00014 39.1 12.3 140 86-235 88-244 (644)
64 2vef_A Dihydropteroate synthas 89.4 6.9 0.00024 34.1 12.9 139 86-232 28-223 (314)
65 3eeg_A 2-isopropylmalate synth 89.3 6.3 0.00022 34.5 12.6 124 88-231 148-277 (325)
66 1ydn_A Hydroxymethylglutaryl-C 89.0 8.7 0.0003 32.9 13.3 80 88-174 152-234 (295)
67 1f6y_A 5-methyltetrahydrofolat 88.7 10 0.00035 32.1 13.4 134 87-231 21-185 (262)
68 2bdq_A Copper homeostasis prot 88.4 7.9 0.00027 32.0 11.8 129 90-240 75-207 (224)
69 2r91_A 2-keto-3-deoxy-(6-phosp 88.3 4.6 0.00016 34.6 10.9 74 154-239 22-96 (286)
70 3b0p_A TRNA-dihydrouridine syn 88.1 13 0.00045 32.7 15.5 138 89-240 68-225 (350)
71 2ftp_A Hydroxymethylglutaryl-C 88.1 3.8 0.00013 35.5 10.3 80 88-174 156-238 (302)
72 3usb_A Inosine-5'-monophosphat 87.8 18 0.0006 33.8 17.0 131 91-242 255-390 (511)
73 4hb7_A Dihydropteroate synthas 86.9 4.8 0.00016 34.3 9.9 137 86-231 25-191 (270)
74 1w3i_A EDA, 2-keto-3-deoxy glu 86.9 5.3 0.00018 34.4 10.5 74 154-239 23-97 (293)
75 3vnd_A TSA, tryptophan synthas 86.7 8.6 0.00029 32.7 11.5 83 88-170 29-129 (267)
76 2y88_A Phosphoribosyl isomeras 86.5 2.9 9.9E-05 34.6 8.4 128 92-241 32-170 (244)
77 4avf_A Inosine-5'-monophosphat 86.4 16 0.00053 33.9 14.1 132 91-243 228-364 (490)
78 2nuw_A 2-keto-3-deoxygluconate 86.2 5 0.00017 34.4 9.9 74 154-239 23-97 (288)
79 1gte_A Dihydropyrimidine dehyd 85.9 22 0.00075 36.2 16.0 143 89-240 646-816 (1025)
80 3inp_A D-ribulose-phosphate 3- 85.8 7.6 0.00026 32.6 10.6 98 88-209 37-139 (246)
81 3rmj_A 2-isopropylmalate synth 85.8 7.2 0.00025 34.8 11.0 124 88-231 154-283 (370)
82 3iwp_A Copper homeostasis prot 85.7 12 0.0004 32.2 11.8 128 90-240 110-238 (287)
83 3k13_A 5-methyltetrahydrofolat 85.6 17 0.00058 31.4 15.2 78 87-173 33-116 (300)
84 1nvm_A HOA, 4-hydroxy-2-oxoval 85.5 6.7 0.00023 34.6 10.7 119 88-231 146-269 (345)
85 1thf_D HISF protein; thermophI 85.3 15 0.0005 30.4 12.5 75 91-172 30-104 (253)
86 1x7f_A Outer surface protein; 85.3 8.6 0.0003 34.5 11.2 182 89-280 39-251 (385)
87 1xky_A Dihydrodipicolinate syn 84.4 8.5 0.00029 33.2 10.6 77 154-239 36-113 (301)
88 4fxs_A Inosine-5'-monophosphat 84.3 26 0.00089 32.5 15.8 132 91-243 230-366 (496)
89 2ekc_A AQ_1548, tryptophan syn 84.3 17 0.0006 30.5 14.7 84 88-171 28-129 (262)
90 3a5f_A Dihydrodipicolinate syn 84.3 8.7 0.0003 32.9 10.6 77 154-239 25-102 (291)
91 1m5w_A Pyridoxal phosphate bio 83.9 1.9 6.7E-05 35.9 5.8 133 89-242 75-217 (243)
92 1qop_A Tryptophan synthase alp 83.9 18 0.00063 30.4 12.9 84 88-171 28-129 (268)
93 1ka9_F Imidazole glycerol phos 83.8 13 0.00045 30.6 11.4 76 90-172 30-105 (252)
94 3bg3_A Pyruvate carboxylase, m 83.6 7.4 0.00025 38.0 10.7 79 88-173 258-339 (718)
95 3flu_A DHDPS, dihydrodipicolin 83.5 9.7 0.00033 32.8 10.6 77 154-239 31-108 (297)
96 2ehh_A DHDPS, dihydrodipicolin 83.4 9.3 0.00032 32.8 10.4 77 154-239 24-101 (294)
97 3b0p_A TRNA-dihydrouridine syn 83.3 11 0.00038 33.3 11.1 87 154-241 73-165 (350)
98 1vzw_A Phosphoribosyl isomeras 83.0 6.8 0.00023 32.3 9.2 75 92-174 33-107 (244)
99 3noy_A 4-hydroxy-3-methylbut-2 82.9 25 0.00084 31.1 14.6 128 86-240 41-183 (366)
100 2yxg_A DHDPS, dihydrodipicolin 82.9 8.8 0.0003 32.9 10.0 77 154-239 24-101 (289)
101 3cpr_A Dihydrodipicolinate syn 82.8 9 0.00031 33.1 10.1 77 154-239 40-117 (304)
102 3b4u_A Dihydrodipicolinate syn 82.8 9.4 0.00032 32.8 10.2 77 154-239 27-104 (294)
103 3e96_A Dihydrodipicolinate syn 82.7 5.2 0.00018 34.9 8.6 77 154-239 36-112 (316)
104 3l21_A DHDPS, dihydrodipicolin 82.7 8.6 0.0003 33.2 9.9 77 154-239 39-116 (304)
105 3cqj_A L-ribulose-5-phosphate 82.6 14 0.00046 31.2 11.2 84 153-240 32-128 (295)
106 1f6k_A N-acetylneuraminate lya 82.4 9.8 0.00033 32.7 10.1 77 154-239 27-105 (293)
107 1tqj_A Ribulose-phosphate 3-ep 82.3 19 0.00067 29.5 12.7 124 89-240 15-141 (230)
108 3gnh_A L-lysine, L-arginine ca 82.2 21 0.00072 31.2 12.7 83 88-177 164-253 (403)
109 3hbl_A Pyruvate carboxylase; T 82.2 31 0.0011 35.6 15.2 137 88-231 552-732 (1150)
110 3tva_A Xylose isomerase domain 82.0 8.8 0.0003 32.2 9.7 15 156-170 26-40 (290)
111 2wkj_A N-acetylneuraminate lya 81.9 9.4 0.00032 33.0 9.9 77 154-239 35-112 (303)
112 3qze_A DHDPS, dihydrodipicolin 81.9 11 0.00038 32.7 10.4 77 154-239 47-124 (314)
113 3nav_A Tryptophan synthase alp 81.9 23 0.00078 30.1 12.7 141 89-233 32-207 (271)
114 2vc6_A MOSA, dihydrodipicolina 81.8 10 0.00034 32.6 10.0 77 154-239 24-101 (292)
115 1o5k_A DHDPS, dihydrodipicolin 81.8 10 0.00034 32.8 10.0 77 154-239 36-113 (306)
116 2bmb_A Folic acid synthesis pr 81.8 35 0.0012 32.1 14.4 141 87-234 244-460 (545)
117 2v9d_A YAGE; dihydrodipicolini 81.8 9.2 0.00031 33.7 9.9 77 154-239 55-132 (343)
118 3ovp_A Ribulose-phosphate 3-ep 81.8 10 0.00034 31.4 9.6 96 88-207 14-115 (228)
119 3gk0_A PNP synthase, pyridoxin 81.7 2.5 8.4E-05 35.9 5.7 131 89-242 103-245 (278)
120 3si9_A DHDPS, dihydrodipicolin 81.5 11 0.00036 32.9 10.1 77 154-239 46-123 (315)
121 2ojp_A DHDPS, dihydrodipicolin 81.3 8.6 0.00029 33.0 9.4 77 154-239 25-102 (292)
122 3na8_A Putative dihydrodipicol 81.3 9.3 0.00032 33.2 9.7 77 154-239 48-125 (315)
123 3dz1_A Dihydrodipicolinate syn 81.2 10 0.00034 33.0 9.9 76 154-239 32-108 (313)
124 1rqb_A Transcarboxylase 5S sub 81.0 8.1 0.00028 36.3 9.6 79 88-173 172-254 (539)
125 2e6f_A Dihydroorotate dehydrog 80.9 7.7 0.00026 33.5 9.0 80 154-240 109-195 (314)
126 3daq_A DHDPS, dihydrodipicolin 80.7 12 0.00041 32.1 10.1 77 154-239 26-103 (292)
127 2rfg_A Dihydrodipicolinate syn 80.6 8.4 0.00029 33.2 9.1 77 154-239 24-101 (297)
128 3m5v_A DHDPS, dihydrodipicolin 80.6 17 0.00057 31.3 11.0 78 154-239 31-109 (301)
129 4aie_A Glucan 1,6-alpha-glucos 80.4 5.5 0.00019 37.1 8.4 60 154-215 35-104 (549)
130 3tak_A DHDPS, dihydrodipicolin 80.3 11 0.00039 32.2 9.8 77 154-239 25-102 (291)
131 2p0o_A Hypothetical protein DU 80.2 25 0.00085 31.3 12.1 185 89-280 15-223 (372)
132 3s5o_A 4-hydroxy-2-oxoglutarat 80.1 12 0.0004 32.4 9.9 77 154-239 38-115 (307)
133 2r8w_A AGR_C_1641P; APC7498, d 79.6 9.5 0.00033 33.4 9.2 77 154-239 58-135 (332)
134 3fkr_A L-2-keto-3-deoxyarabona 79.6 12 0.00042 32.4 9.8 77 154-239 32-109 (309)
135 2ekc_A AQ_1548, tryptophan syn 79.3 27 0.00092 29.3 13.2 22 185-206 75-96 (262)
136 3d0c_A Dihydrodipicolinate syn 79.3 11 0.00036 32.8 9.3 77 154-239 36-112 (314)
137 2cc0_A Acetyl-xylan esterase; 79.3 19 0.00064 28.6 10.3 129 96-242 48-185 (195)
138 3ngj_A Deoxyribose-phosphate a 79.2 6.8 0.00023 32.7 7.6 139 75-240 82-229 (239)
139 1vli_A Spore coat polysacchari 79.1 14 0.00046 33.2 10.0 108 89-205 42-185 (385)
140 2qf7_A Pyruvate carboxylase pr 78.9 27 0.00094 36.1 13.5 137 87-240 569-729 (1165)
141 4dpp_A DHDPS 2, dihydrodipicol 78.5 17 0.00059 32.2 10.5 77 154-239 83-160 (360)
142 2wqp_A Polysialic acid capsule 78.5 19 0.00064 31.8 10.7 107 89-205 33-175 (349)
143 3g8r_A Probable spore coat pol 78.5 32 0.0011 30.4 12.1 122 128-266 126-250 (350)
144 1rpx_A Protein (ribulose-phosp 78.4 22 0.00075 28.9 10.7 80 88-173 20-100 (230)
145 2nx9_A Oxaloacetate decarboxyl 77.9 15 0.0005 33.9 10.2 78 88-173 155-235 (464)
146 2l82_A Designed protein OR32; 77.9 17 0.00059 26.2 11.8 98 123-240 12-110 (162)
147 2yw3_A 4-hydroxy-2-oxoglutarat 77.9 26 0.00088 28.3 14.5 110 88-240 22-131 (207)
148 1i60_A IOLI protein; beta barr 77.7 8.5 0.00029 31.9 8.1 73 126-206 16-99 (278)
149 1pii_A N-(5'phosphoribosyl)ant 77.7 21 0.00072 32.7 11.1 95 123-248 195-289 (452)
150 3h5d_A DHDPS, dihydrodipicolin 77.6 23 0.00079 30.6 11.0 78 153-239 30-109 (311)
151 1qop_A Tryptophan synthase alp 77.4 31 0.0011 28.9 12.1 48 154-201 34-91 (268)
152 3o6c_A PNP synthase, pyridoxin 77.2 5 0.00017 33.8 6.2 104 122-242 109-237 (260)
153 3nvt_A 3-deoxy-D-arabino-heptu 77.2 14 0.00047 33.2 9.6 121 89-235 154-278 (385)
154 3f4w_A Putative hexulose 6 pho 76.9 21 0.00072 28.5 10.0 123 88-240 10-134 (211)
155 3hgj_A Chromate reductase; TIM 76.8 9.5 0.00033 33.6 8.4 86 155-240 156-259 (349)
156 2dh2_A 4F2 cell-surface antige 76.6 4.9 0.00017 36.5 6.6 85 154-240 39-142 (424)
157 3qc0_A Sugar isomerase; TIM ba 76.6 16 0.00054 30.2 9.5 74 154-240 21-103 (275)
158 3otr_A Enolase; structural gen 76.5 34 0.0012 31.3 12.0 124 87-240 280-408 (452)
159 1jub_A Dihydroorotate dehydrog 76.4 18 0.00062 31.0 10.0 82 154-240 109-192 (311)
160 3gr7_A NADPH dehydrogenase; fl 76.4 14 0.00047 32.5 9.3 85 155-240 148-249 (340)
161 3eb2_A Putative dihydrodipicol 76.3 8.4 0.00029 33.2 7.8 77 154-239 28-105 (300)
162 1h1y_A D-ribulose-5-phosphate 76.0 30 0.001 28.1 13.5 128 89-242 17-147 (228)
163 3qfe_A Putative dihydrodipicol 76.0 13 0.00046 32.3 9.0 75 154-237 35-110 (318)
164 1u83_A Phosphosulfolactate syn 76.0 13 0.00046 31.5 8.6 74 88-171 50-130 (276)
165 3dx5_A Uncharacterized protein 75.8 14 0.00048 30.8 9.0 17 188-206 83-99 (286)
166 1geq_A Tryptophan synthase alp 75.5 32 0.0011 28.2 11.5 82 89-173 17-117 (248)
167 2p10_A MLL9387 protein; putati 75.4 38 0.0013 28.9 12.1 105 124-240 79-190 (286)
168 3qja_A IGPS, indole-3-glycerol 75.4 37 0.0013 28.7 13.9 120 90-241 71-190 (272)
169 4fo4_A Inosine 5'-monophosphat 75.3 44 0.0015 29.6 12.6 97 123-240 81-177 (366)
170 3tdn_A FLR symmetric alpha-bet 75.3 4.7 0.00016 33.5 5.7 74 91-172 35-109 (247)
171 3ffs_A Inosine-5-monophosphate 74.8 43 0.0015 30.1 12.2 130 94-243 146-278 (400)
172 1z41_A YQJM, probable NADH-dep 74.6 17 0.00057 31.9 9.4 78 88-171 226-307 (338)
173 2xwp_A Sirohydrochlorin cobalt 74.6 37 0.0013 28.4 11.7 110 125-234 21-167 (264)
174 3gr7_A NADPH dehydrogenase; fl 74.5 12 0.00041 32.9 8.4 79 88-171 226-307 (340)
175 3ih1_A Methylisocitrate lyase; 73.9 43 0.0015 28.9 14.4 135 98-239 43-194 (305)
176 1z41_A YQJM, probable NADH-dep 73.8 30 0.001 30.2 10.8 85 155-240 148-249 (338)
177 1hjs_A Beta-1,4-galactanase; 4 73.5 45 0.0016 29.0 15.3 140 99-244 35-215 (332)
178 4eiv_A Deoxyribose-phosphate a 73.0 41 0.0014 28.8 11.0 146 75-236 87-261 (297)
179 3ctl_A D-allulose-6-phosphate 72.7 39 0.0013 27.8 10.8 97 88-209 10-111 (231)
180 1h5y_A HISF; histidine biosynt 72.6 12 0.0004 30.7 7.5 77 89-172 31-107 (253)
181 2xwp_A Sirohydrochlorin cobalt 72.5 27 0.00091 29.3 9.9 138 89-243 61-201 (264)
182 1gcy_A Glucan 1,4-alpha-maltot 72.1 8.4 0.00029 36.0 7.2 35 179-215 80-117 (527)
183 1j93_A UROD, uroporphyrinogen 72.0 23 0.00078 31.0 9.7 71 96-171 198-274 (353)
184 3vni_A Xylose isomerase domain 72.0 26 0.00089 29.2 9.8 77 153-239 19-107 (294)
185 3hbl_A Pyruvate carboxylase; T 71.8 28 0.00096 35.9 11.4 79 88-174 689-770 (1150)
186 1lwj_A 4-alpha-glucanotransfer 71.8 6.1 0.00021 35.9 6.0 69 154-224 26-104 (441)
187 2h9a_B CO dehydrogenase/acetyl 71.5 50 0.0017 28.6 14.3 135 91-231 74-229 (310)
188 4fo4_A Inosine 5'-monophosphat 71.3 55 0.0019 29.0 15.4 130 93-243 109-243 (366)
189 1vrd_A Inosine-5'-monophosphat 71.3 63 0.0021 29.6 15.7 129 91-240 236-369 (494)
190 3dz1_A Dihydrodipicolinate syn 71.1 23 0.0008 30.6 9.4 82 86-170 24-108 (313)
191 3gka_A N-ethylmaleimide reduct 70.8 8.4 0.00029 34.3 6.5 133 85-240 148-316 (361)
192 4ab4_A Xenobiotic reductase B; 70.1 9 0.00031 34.1 6.5 87 85-171 140-262 (362)
193 3o63_A Probable thiamine-phosp 70.0 25 0.00084 29.3 8.9 74 91-174 43-122 (243)
194 2v82_A 2-dehydro-3-deoxy-6-pho 70.0 40 0.0014 26.9 12.2 71 88-171 16-87 (212)
195 3l5l_A Xenobiotic reductase A; 69.9 6.6 0.00023 34.9 5.6 86 155-240 162-266 (363)
196 3r2g_A Inosine 5'-monophosphat 69.8 34 0.0011 30.4 10.1 129 90-241 98-229 (361)
197 3obe_A Sugar phosphate isomera 69.1 11 0.00037 32.3 6.7 116 153-274 38-165 (305)
198 3a24_A Alpha-galactosidase; gl 68.9 40 0.0014 32.4 11.0 111 87-209 305-423 (641)
199 3apt_A Methylenetetrahydrofola 68.7 41 0.0014 29.0 10.3 102 124-240 29-145 (310)
200 2z1k_A (NEO)pullulanase; hydro 68.5 6.1 0.00021 36.2 5.3 38 186-225 94-132 (475)
201 2r8c_A Putative amidohydrolase 68.4 31 0.0011 30.5 10.0 85 88-179 172-263 (426)
202 1ur4_A Galactanase; hydrolase, 68.3 67 0.0023 28.8 13.3 140 98-244 55-235 (399)
203 3t7v_A Methylornithine synthas 68.2 36 0.0012 29.5 10.1 143 122-277 186-340 (350)
204 2q02_A Putative cytoplasmic pr 68.1 19 0.00067 29.6 8.0 44 126-170 21-70 (272)
205 4ef8_A Dihydroorotate dehydrog 67.8 64 0.0022 28.4 12.2 145 88-240 136-306 (354)
206 3tsm_A IGPS, indole-3-glycerol 67.8 56 0.0019 27.7 14.0 119 91-241 79-197 (272)
207 1ht6_A AMY1, alpha-amylase iso 67.6 7.9 0.00027 34.8 5.7 60 154-215 24-93 (405)
208 2d73_A Alpha-glucosidase SUSB; 67.6 53 0.0018 32.0 11.6 115 87-210 367-507 (738)
209 3ngf_A AP endonuclease, family 67.4 20 0.0007 29.6 8.0 42 126-169 25-66 (269)
210 3cpr_A Dihydrodipicolinate syn 67.2 42 0.0014 28.8 10.1 82 86-170 32-117 (304)
211 1zco_A 2-dehydro-3-deoxyphosph 66.7 50 0.0017 27.7 10.2 105 89-201 35-156 (262)
212 2zad_A Muconate cycloisomerase 66.7 64 0.0022 28.0 11.8 76 89-171 139-218 (345)
213 2ovl_A Putative racemase; stru 66.6 67 0.0023 28.2 13.0 76 88-169 145-223 (371)
214 3ivs_A Homocitrate synthase, m 66.6 44 0.0015 30.3 10.4 80 89-174 178-258 (423)
215 1zlp_A PSR132, petal death pro 66.6 36 0.0012 29.6 9.5 82 156-240 51-136 (318)
216 4gxw_A Adenosine deaminase; am 66.5 54 0.0019 29.2 10.9 82 87-174 161-245 (380)
217 3l21_A DHDPS, dihydrodipicolin 66.2 39 0.0013 29.0 9.7 84 86-170 31-116 (304)
218 2bdq_A Copper homeostasis prot 65.7 17 0.00059 29.9 6.8 72 91-171 133-207 (224)
219 2jbm_A Nicotinate-nucleotide p 65.5 15 0.0005 31.8 6.8 64 96-171 209-272 (299)
220 3hgj_A Chromate reductase; TIM 65.5 33 0.0011 30.1 9.3 78 88-171 236-318 (349)
221 1ka9_F Imidazole glycerol phos 65.2 29 0.00098 28.5 8.5 97 92-208 153-250 (252)
222 3l5a_A NADH/flavin oxidoreduct 65.2 79 0.0027 28.5 14.4 146 85-240 157-346 (419)
223 2b7n_A Probable nicotinate-nuc 65.0 15 0.00052 31.2 6.7 64 96-171 194-257 (273)
224 2nuw_A 2-keto-3-deoxygluconate 64.8 32 0.0011 29.3 8.8 82 86-170 15-97 (288)
225 3oix_A Putative dihydroorotate 64.6 73 0.0025 27.9 13.3 143 88-240 138-304 (345)
226 1r3s_A URO-D, uroporphyrinogen 64.2 70 0.0024 28.0 11.3 71 96-170 202-282 (367)
227 3dx5_A Uncharacterized protein 64.1 12 0.0004 31.3 5.9 78 88-170 15-103 (286)
228 1w3i_A EDA, 2-keto-3-deoxy glu 64.1 33 0.0011 29.2 8.8 82 86-170 15-97 (293)
229 2wc7_A Alpha amylase, catalyti 64.0 6.5 0.00022 36.3 4.5 42 182-225 95-138 (488)
230 1qpo_A Quinolinate acid phosph 63.9 21 0.00071 30.6 7.3 66 95-172 205-270 (284)
231 1wzl_A Alpha-amylase II; pullu 63.7 10 0.00035 35.9 6.0 71 154-226 176-256 (585)
232 3kws_A Putative sugar isomeras 63.7 46 0.0016 27.6 9.6 19 154-172 41-59 (287)
233 1j0h_A Neopullulanase; beta-al 63.7 11 0.00038 35.6 6.2 71 154-226 179-259 (588)
234 4exq_A UPD, URO-D, uroporphyri 63.5 52 0.0018 29.1 10.2 70 97-170 203-279 (368)
235 4a29_A Engineered retro-aldol 63.3 44 0.0015 28.1 9.0 61 102-171 171-233 (258)
236 3iix_A Biotin synthetase, puta 63.0 55 0.0019 28.2 10.3 82 122-206 176-264 (348)
237 2og9_A Mandelate racemase/muco 62.8 68 0.0023 28.4 11.0 76 88-169 161-239 (393)
238 1ps9_A 2,4-dienoyl-COA reducta 62.8 22 0.00076 34.1 8.2 86 155-240 145-248 (671)
239 1wa3_A 2-keto-3-deoxy-6-phosph 62.8 55 0.0019 25.8 13.8 113 87-240 18-131 (205)
240 3obk_A Delta-aminolevulinic ac 62.7 16 0.00053 32.1 6.2 57 87-143 69-132 (356)
241 1fob_A Beta-1,4-galactanase; B 62.7 42 0.0015 29.1 9.4 78 155-239 31-133 (334)
242 1mxg_A Alpha amylase; hyperthe 62.5 15 0.0005 33.3 6.6 33 181-215 78-111 (435)
243 2pgw_A Muconate cycloisomerase 62.5 82 0.0028 27.7 13.6 77 88-171 146-224 (384)
244 3sjn_A Mandelate racemase/muco 62.4 82 0.0028 27.7 11.8 77 89-169 146-226 (374)
245 2ztj_A Homocitrate synthase; ( 62.4 45 0.0015 29.7 9.6 81 88-174 142-224 (382)
246 1g94_A Alpha-amylase; beta-alp 62.3 15 0.0005 33.4 6.5 57 157-215 21-89 (448)
247 3l23_A Sugar phosphate isomera 62.2 27 0.00091 29.7 7.9 108 153-274 31-159 (303)
248 2wkj_A N-acetylneuraminate lya 62.1 51 0.0017 28.2 9.7 84 86-170 27-112 (303)
249 4hjf_A Ggdef family protein; s 62.1 46 0.0016 29.0 9.6 37 194-240 274-310 (340)
250 4aef_A Neopullulanase (alpha-a 62.0 9.2 0.00031 36.7 5.3 71 154-226 242-322 (645)
251 3u0h_A Xylose isomerase domain 62.0 26 0.00087 28.9 7.6 17 154-170 19-35 (281)
252 3dhu_A Alpha-amylase; structur 61.9 8 0.00027 35.2 4.7 60 154-215 33-108 (449)
253 3flu_A DHDPS, dihydrodipicolin 61.9 49 0.0017 28.2 9.5 84 86-170 23-108 (297)
254 3oa3_A Aldolase; structural ge 61.8 32 0.0011 29.4 8.1 142 77-240 115-263 (288)
255 1vp8_A Hypothetical protein AF 61.8 55 0.0019 26.2 8.8 97 88-196 26-133 (201)
256 3l5l_A Xenobiotic reductase A; 61.6 23 0.00079 31.3 7.5 78 88-171 243-325 (363)
257 2p10_A MLL9387 protein; putati 61.6 76 0.0026 27.1 11.2 124 88-228 108-249 (286)
258 3cu2_A Ribulose-5-phosphate 3- 61.5 25 0.00085 29.2 7.3 79 89-174 24-102 (237)
259 1ea9_C Cyclomaltodextrinase; h 61.3 12 0.0004 35.5 5.8 70 154-225 175-254 (583)
260 1vhn_A Putative flavin oxidore 61.2 17 0.00057 31.5 6.4 101 90-198 139-250 (318)
261 2r14_A Morphinone reductase; H 60.9 30 0.001 30.8 8.1 86 155-240 170-275 (377)
262 1jub_A Dihydroorotate dehydrog 60.8 52 0.0018 28.0 9.5 144 88-240 103-271 (311)
263 2hmc_A AGR_L_411P, dihydrodipi 60.7 49 0.0017 29.0 9.4 43 187-231 103-147 (344)
264 2r91_A 2-keto-3-deoxy-(6-phosp 60.6 39 0.0013 28.7 8.6 82 86-170 14-96 (286)
265 1xky_A Dihydrodipicolinate syn 60.5 52 0.0018 28.1 9.4 82 86-170 28-113 (301)
266 3rr1_A GALD, putative D-galact 60.4 28 0.00097 31.2 8.0 82 88-169 124-210 (405)
267 4gj1_A 1-(5-phosphoribosyl)-5- 60.4 11 0.00038 31.4 4.9 131 91-240 31-171 (243)
268 3o0f_A Putative metal-dependen 60.3 63 0.0022 27.7 9.9 16 25-40 26-41 (301)
269 3nl6_A Thiamine biosynthetic b 60.3 99 0.0034 28.9 11.9 114 91-244 25-142 (540)
270 1qwg_A PSL synthase;, (2R)-pho 60.2 47 0.0016 27.8 8.6 135 122-276 24-165 (251)
271 4djd_D C/Fe-SP, corrinoid/iron 60.2 86 0.0029 27.2 14.4 137 90-231 79-236 (323)
272 4f3h_A Fimxeal, putative uncha 60.1 57 0.002 26.6 9.4 41 190-240 200-241 (250)
273 2r8w_A AGR_C_1641P; APC7498, d 60.1 38 0.0013 29.5 8.6 84 86-170 50-135 (332)
274 1f76_A Dihydroorotate dehydrog 60.1 20 0.0007 31.1 6.9 81 88-171 222-318 (336)
275 1m53_A Isomaltulose synthase; 59.9 11 0.00039 35.5 5.4 69 154-224 48-127 (570)
276 3khj_A Inosine-5-monophosphate 59.8 92 0.0031 27.4 13.3 128 94-243 107-239 (361)
277 3bh4_A Alpha-amylase; calcium, 59.5 13 0.00045 34.1 5.7 34 182-217 71-106 (483)
278 1wpc_A Glucan 1,4-alpha-maltoh 59.4 13 0.00045 34.1 5.8 34 182-217 75-110 (485)
279 1rd5_A Tryptophan synthase alp 59.4 75 0.0026 26.3 10.4 78 89-171 30-125 (262)
280 1h7n_A 5-aminolaevulinic acid 59.4 25 0.00085 30.7 6.9 57 87-143 65-129 (342)
281 1zja_A Trehalulose synthase; s 59.3 14 0.00049 34.6 6.0 67 154-222 35-112 (557)
282 2p0o_A Hypothetical protein DU 59.3 26 0.0009 31.2 7.3 16 259-274 158-173 (372)
283 3iwp_A Copper homeostasis prot 59.2 16 0.00055 31.3 5.7 71 94-174 169-241 (287)
284 2qf7_A Pyruvate carboxylase pr 59.2 46 0.0016 34.4 10.2 105 88-200 706-827 (1165)
285 2gou_A Oxidoreductase, FMN-bin 59.2 28 0.00096 30.8 7.7 87 155-241 165-271 (365)
286 3edf_A FSPCMD, cyclomaltodextr 59.0 13 0.00044 35.3 5.7 60 154-215 151-223 (601)
287 1ny1_A Probable polysaccharide 58.9 41 0.0014 27.6 8.3 132 95-240 86-227 (240)
288 1g5a_A Amylosucrase; glycosylt 58.8 13 0.00043 35.7 5.6 63 154-218 116-191 (628)
289 3fkr_A L-2-keto-3-deoxyarabona 58.6 44 0.0015 28.7 8.7 82 86-170 24-109 (309)
290 1q7z_A 5-methyltetrahydrofolat 58.6 1.2E+02 0.0042 28.5 14.9 137 87-234 336-500 (566)
291 2wje_A CPS4B, tyrosine-protein 58.5 61 0.0021 26.5 9.3 48 87-134 20-67 (247)
292 1yx1_A Hypothetical protein PA 58.4 32 0.0011 28.3 7.6 43 189-234 84-126 (264)
293 1w5q_A Delta-aminolevulinic ac 58.3 16 0.00056 31.7 5.6 57 87-143 62-125 (337)
294 1ud2_A Amylase, alpha-amylase; 58.2 17 0.00057 33.3 6.2 34 182-217 73-108 (480)
295 3qze_A DHDPS, dihydrodipicolin 58.2 46 0.0016 28.7 8.7 82 86-170 39-124 (314)
296 2w6r_A Imidazole glycerol phos 58.2 36 0.0012 28.1 7.9 71 93-171 158-229 (266)
297 3s1x_A Probable transaldolase; 58.1 49 0.0017 27.1 8.3 84 88-183 113-196 (223)
298 3tak_A DHDPS, dihydrodipicolin 57.9 49 0.0017 28.1 8.7 84 86-170 17-102 (291)
299 3zss_A Putative glucanohydrola 57.8 13 0.00044 36.2 5.5 60 154-215 256-345 (695)
300 4aee_A Alpha amylase, catalyti 57.7 8.4 0.00029 37.4 4.2 70 154-225 268-347 (696)
301 2pp0_A L-talarate/galactarate 57.7 94 0.0032 27.6 11.0 78 88-171 174-254 (398)
302 2qde_A Mandelate racemase/muco 57.7 79 0.0027 28.0 10.5 78 88-172 144-224 (397)
303 3aty_A Tcoye, prostaglandin F2 57.3 27 0.00092 31.1 7.2 137 85-240 160-336 (379)
304 3czg_A Sucrose hydrolase; (alp 57.3 14 0.00047 35.6 5.6 63 154-218 109-184 (644)
305 1f6k_A N-acetylneuraminate lya 57.3 67 0.0023 27.3 9.6 82 86-170 19-105 (293)
306 4ef8_A Dihydroorotate dehydrog 57.2 58 0.002 28.7 9.3 81 154-239 142-227 (354)
307 2iw0_A Chitin deacetylase; hyd 57.1 42 0.0015 27.8 8.1 139 95-243 89-238 (254)
308 3m5v_A DHDPS, dihydrodipicolin 57.1 36 0.0012 29.1 7.8 84 86-170 23-109 (301)
309 3s5o_A 4-hydroxy-2-oxoglutarat 56.8 54 0.0018 28.1 8.9 82 86-170 30-115 (307)
310 3dg3_A Muconate cycloisomerase 56.8 1E+02 0.0035 27.0 11.9 76 88-169 138-217 (367)
311 3a5f_A Dihydrodipicolinate syn 56.7 48 0.0016 28.2 8.5 82 85-170 17-102 (291)
312 2ze0_A Alpha-glucosidase; TIM 56.6 16 0.00055 34.3 5.9 69 154-224 34-113 (555)
313 3k8k_A Alpha-amylase, SUSG; al 56.5 16 0.00055 35.3 6.0 71 154-226 63-143 (669)
314 2guy_A Alpha-amylase A; (beta- 56.5 11 0.00038 34.5 4.6 33 181-215 89-122 (478)
315 2zic_A Dextran glucosidase; TI 56.4 12 0.00043 34.9 5.1 69 154-224 34-113 (543)
316 3jva_A Dipeptide epimerase; en 56.3 1E+02 0.0035 26.8 13.0 75 88-169 138-215 (354)
317 3na8_A Putative dihydrodipicol 56.2 43 0.0015 28.9 8.2 82 86-170 40-125 (315)
318 3gka_A N-ethylmaleimide reduct 56.2 49 0.0017 29.2 8.6 86 155-240 165-270 (361)
319 1thf_D HISF protein; thermophI 56.2 41 0.0014 27.5 7.9 97 92-208 152-249 (253)
320 3go2_A Putative L-alanine-DL-g 56.1 1.1E+02 0.0038 27.3 11.5 86 87-173 141-249 (409)
321 1gte_A Dihydropyrimidine dehyd 56.0 52 0.0018 33.4 9.9 112 123-239 618-734 (1025)
322 1vrd_A Inosine-5'-monophosphat 56.0 53 0.0018 30.1 9.3 68 154-240 239-306 (494)
323 1vli_A Spore coat polysacchari 55.9 1.1E+02 0.0038 27.2 14.6 120 128-267 149-275 (385)
324 3fa4_A 2,3-dimethylmalate lyas 55.9 46 0.0016 28.7 8.2 84 156-240 30-115 (302)
325 1hjs_A Beta-1,4-galactanase; 4 55.8 19 0.00063 31.5 5.8 51 154-211 30-80 (332)
326 1ep3_A Dihydroorotate dehydrog 55.8 27 0.00091 29.8 6.8 111 123-240 81-196 (311)
327 2j13_A Polysaccharide deacetyl 55.7 42 0.0014 27.7 7.8 24 217-240 216-239 (247)
328 1fa2_A Beta-amylase; TIM barre 55.5 34 0.0012 31.5 7.5 71 139-213 12-93 (498)
329 2v5b_A Triosephosphate isomera 55.3 90 0.0031 25.9 10.8 69 141-222 60-128 (244)
330 2aaa_A Alpha-amylase; glycosid 55.3 10 0.00035 34.8 4.2 33 181-215 89-122 (484)
331 3rcy_A Mandelate racemase/muco 55.3 94 0.0032 28.1 10.6 85 88-172 145-238 (433)
332 1oy0_A Ketopantoate hydroxymet 55.1 98 0.0033 26.3 14.4 139 87-240 76-221 (281)
333 1vr6_A Phospho-2-dehydro-3-deo 54.9 1E+02 0.0036 27.0 10.4 105 89-201 118-239 (350)
334 3qy7_A Tyrosine-protein phosph 54.9 34 0.0012 28.7 7.1 50 86-135 15-64 (262)
335 3si9_A DHDPS, dihydrodipicolin 54.8 52 0.0018 28.4 8.4 84 86-170 38-123 (315)
336 2e6f_A Dihydroorotate dehydrog 54.8 99 0.0034 26.2 12.3 144 88-240 103-273 (314)
337 3r8r_A Transaldolase; pentose 54.8 40 0.0014 27.4 7.2 84 88-183 111-194 (212)
338 4dwd_A Mandelate racemase/muco 54.6 1.2E+02 0.004 27.0 13.1 84 88-171 138-225 (393)
339 2yxg_A DHDPS, dihydrodipicolin 54.6 49 0.0017 28.1 8.2 82 86-170 16-101 (289)
340 3lye_A Oxaloacetate acetyl hyd 54.5 55 0.0019 28.3 8.4 84 156-240 37-123 (307)
341 3feq_A Putative amidohydrolase 54.4 97 0.0033 27.0 10.5 78 88-172 169-253 (423)
342 3paj_A Nicotinate-nucleotide p 54.3 30 0.001 30.1 6.7 63 95-172 242-304 (320)
343 4dpp_A DHDPS 2, dihydrodipicol 54.2 87 0.003 27.7 9.9 82 86-170 75-160 (360)
344 3aj7_A Oligo-1,6-glucosidase; 54.2 19 0.00065 34.1 6.0 67 154-222 43-120 (589)
345 3lye_A Oxaloacetate acetyl hyd 54.2 1.1E+02 0.0036 26.4 14.1 16 155-170 107-122 (307)
346 2fli_A Ribulose-phosphate 3-ep 54.1 81 0.0028 25.0 9.8 80 88-173 13-93 (220)
347 3l0g_A Nicotinate-nucleotide p 54.0 20 0.00068 30.9 5.4 63 95-172 218-280 (300)
348 1h7n_A 5-aminolaevulinic acid 53.8 74 0.0025 27.7 9.0 70 90-169 242-327 (342)
349 1rvk_A Isomerase/lactonizing e 53.8 1.1E+02 0.0039 26.7 12.8 83 88-171 148-234 (382)
350 1vyr_A Pentaerythritol tetrani 53.8 55 0.0019 28.9 8.6 86 155-240 165-271 (364)
351 1wdp_A Beta-amylase; (beta/alp 53.8 71 0.0024 29.4 9.3 71 139-213 11-92 (495)
352 3bc9_A AMYB, alpha amylase, ca 53.7 18 0.00063 34.3 5.8 60 154-215 153-233 (599)
353 3toy_A Mandelate racemase/muco 53.7 1.2E+02 0.004 26.8 11.2 125 88-240 166-294 (383)
354 1vc4_A Indole-3-glycerol phosp 53.6 96 0.0033 25.7 12.7 119 91-242 65-183 (254)
355 2v9d_A YAGE; dihydrodipicolini 53.4 59 0.002 28.4 8.7 82 86-170 47-132 (343)
356 2yxb_A Coenzyme B12-dependent 53.3 74 0.0025 24.3 9.6 72 87-169 55-126 (161)
357 1hvx_A Alpha-amylase; hydrolas 53.3 20 0.0007 33.2 5.9 34 182-217 74-109 (515)
358 2ze3_A DFA0005; organic waste 53.3 32 0.0011 29.2 6.7 82 156-240 28-112 (275)
359 3bdk_A D-mannonate dehydratase 53.3 24 0.00083 31.6 6.2 82 154-243 33-126 (386)
360 3qn3_A Enolase; structural gen 53.0 75 0.0026 28.7 9.5 124 87-240 260-388 (417)
361 3gnn_A Nicotinate-nucleotide p 53.0 27 0.00093 30.1 6.2 62 96-172 221-282 (298)
362 1uok_A Oligo-1,6-glucosidase; 53.0 13 0.00044 34.9 4.6 68 154-223 34-112 (558)
363 1zlp_A PSR132, petal death pro 52.9 1.1E+02 0.0039 26.4 15.4 140 98-240 53-209 (318)
364 1pv8_A Delta-aminolevulinic ac 52.9 28 0.00097 30.2 6.2 55 87-142 55-117 (330)
365 1mdl_A Mandelate racemase; iso 52.8 1.1E+02 0.0039 26.4 12.3 76 88-169 143-221 (359)
366 1ua7_A Alpha-amylase; beta-alp 52.8 17 0.00059 32.7 5.2 30 186-217 72-102 (422)
367 2ehh_A DHDPS, dihydrodipicolin 52.7 52 0.0018 28.0 8.1 82 86-170 16-101 (294)
368 2qv5_A AGR_C_5032P, uncharacte 52.7 66 0.0023 27.0 8.5 131 87-240 106-245 (261)
369 1h5y_A HISF; histidine biosynt 52.6 64 0.0022 26.0 8.5 97 92-207 155-251 (253)
370 1rd5_A Tryptophan synthase alp 52.6 84 0.0029 25.9 9.3 81 154-240 35-125 (262)
371 1eep_A Inosine 5'-monophosphat 52.4 1.3E+02 0.0043 26.8 16.2 128 92-240 153-285 (404)
372 3oa3_A Aldolase; structural ge 52.4 1.1E+02 0.0038 26.1 10.7 89 87-183 184-273 (288)
373 3ozy_A Putative mandelate race 52.3 1.2E+02 0.0043 26.7 15.0 124 88-240 150-277 (389)
374 3s83_A Ggdef family protein; s 51.9 82 0.0028 25.7 9.1 41 190-240 196-237 (259)
375 2xfr_A Beta-amylase; hydrolase 51.9 40 0.0014 31.3 7.4 56 154-213 34-90 (535)
376 3f4w_A Putative hexulose 6 pho 51.8 86 0.0029 24.7 10.8 116 97-240 70-187 (211)
377 1ep3_A Dihydroorotate dehydrog 51.7 55 0.0019 27.7 8.2 141 89-240 109-270 (311)
378 2i5g_A Amidohydrolase; NYSGXRC 51.7 75 0.0026 27.6 9.0 130 95-240 103-247 (325)
379 3fst_A 5,10-methylenetetrahydr 51.4 97 0.0033 26.6 9.6 69 125-206 40-112 (304)
380 3ngj_A Deoxyribose-phosphate a 51.4 1E+02 0.0035 25.5 14.1 132 87-240 39-177 (239)
381 3daq_A DHDPS, dihydrodipicolin 51.3 58 0.002 27.7 8.1 81 87-170 19-103 (292)
382 1k77_A EC1530, hypothetical pr 51.2 45 0.0015 27.1 7.3 43 126-170 17-59 (260)
383 1twd_A Copper homeostasis prot 51.1 27 0.00093 29.3 5.7 68 94-172 131-199 (256)
384 2ojp_A DHDPS, dihydrodipicolin 50.9 42 0.0014 28.6 7.1 80 86-170 17-102 (292)
385 2wqp_A Polysialic acid capsule 50.8 1.3E+02 0.0044 26.4 14.5 122 128-268 139-264 (349)
386 3khj_A Inosine-5-monophosphate 50.8 1.1E+02 0.0039 26.8 10.2 93 123-240 80-173 (361)
387 1o4u_A Type II quinolic acid p 50.7 22 0.00075 30.4 5.2 67 94-172 203-269 (285)
388 2w6r_A Imidazole glycerol phos 50.7 33 0.0011 28.4 6.4 75 90-171 29-103 (266)
389 3tqv_A Nicotinate-nucleotide p 50.6 25 0.00084 30.2 5.5 67 90-172 205-271 (287)
390 3fa4_A 2,3-dimethylmalate lyas 50.5 1.2E+02 0.0041 26.0 13.2 138 100-239 34-189 (302)
391 2r14_A Morphinone reductase; H 50.5 69 0.0024 28.4 8.7 140 85-240 153-328 (377)
392 1pv8_A Delta-aminolevulinic ac 50.5 73 0.0025 27.6 8.4 70 90-169 231-316 (330)
393 1qho_A Alpha-amylase; glycosid 50.3 15 0.0005 35.6 4.6 35 179-215 97-132 (686)
394 2p8b_A Mandelate racemase/muco 50.2 1.3E+02 0.0044 26.2 11.6 74 89-169 141-218 (369)
395 2hsa_B 12-oxophytodienoate red 50.1 36 0.0012 30.6 6.8 86 155-240 175-286 (402)
396 1o66_A 3-methyl-2-oxobutanoate 50.1 1.2E+02 0.004 25.7 15.8 139 87-240 59-203 (275)
397 3sr7_A Isopentenyl-diphosphate 49.9 65 0.0022 28.5 8.4 78 154-240 158-237 (365)
398 2y8u_A Chitin deacetylase; hyd 49.8 74 0.0025 25.9 8.3 133 95-243 75-221 (230)
399 3usb_A Inosine-5'-monophosphat 49.8 1.4E+02 0.0046 27.7 10.9 123 94-239 196-324 (511)
400 3vav_A 3-methyl-2-oxobutanoate 49.7 1.2E+02 0.0041 25.7 11.3 82 156-239 41-125 (275)
401 1icp_A OPR1, 12-oxophytodienoa 49.7 51 0.0017 29.2 7.7 86 155-240 171-276 (376)
402 1d3c_A Cyclodextrin glycosyltr 49.7 13 0.00043 36.0 4.0 35 179-215 105-140 (686)
403 1m3u_A 3-methyl-2-oxobutanoate 49.5 1.2E+02 0.004 25.6 12.1 140 86-240 58-203 (264)
404 1vs1_A 3-deoxy-7-phosphoheptul 49.4 1E+02 0.0034 26.1 9.2 76 89-172 50-129 (276)
405 1ccw_A Protein (glutamate muta 49.4 52 0.0018 24.4 6.7 74 88-170 41-118 (137)
406 3stp_A Galactonate dehydratase 49.3 36 0.0012 30.6 6.8 83 89-171 179-264 (412)
407 3tsm_A IGPS, indole-3-glycerol 49.3 62 0.0021 27.4 7.8 26 144-171 224-249 (272)
408 3zwt_A Dihydroorotate dehydrog 49.3 45 0.0015 29.5 7.3 81 88-171 231-327 (367)
409 1vem_A Beta-amylase; beta-alph 49.1 53 0.0018 30.6 8.0 67 138-208 9-83 (516)
410 3qja_A IGPS, indole-3-glycerol 49.0 43 0.0015 28.3 6.8 63 101-171 179-242 (272)
411 4e4u_A Mandalate racemase/muco 48.8 90 0.0031 27.9 9.4 85 88-172 143-236 (412)
412 2hk0_A D-psicose 3-epimerase; 48.8 1.2E+02 0.004 25.4 9.8 76 153-239 39-126 (309)
413 3tha_A Tryptophan synthase alp 48.7 43 0.0015 28.0 6.6 120 89-227 26-162 (252)
414 4ab4_A Xenobiotic reductase B; 48.3 74 0.0025 28.1 8.5 86 155-240 157-262 (362)
415 3r12_A Deoxyribose-phosphate a 48.2 1.2E+02 0.0042 25.4 14.4 132 87-240 55-193 (260)
416 1cyg_A Cyclodextrin glucanotra 48.0 12 0.00042 36.1 3.6 35 179-215 101-136 (680)
417 4e5t_A Mandelate racemase / mu 48.0 51 0.0017 29.5 7.6 84 88-171 150-242 (404)
418 1jcn_A Inosine monophosphate d 47.8 1.7E+02 0.0058 26.9 15.9 132 91-241 254-388 (514)
419 3kru_A NADH:flavin oxidoreduct 47.7 1E+02 0.0034 27.0 9.2 85 155-240 147-249 (343)
420 1l6s_A Porphobilinogen synthas 47.4 28 0.00096 30.1 5.3 55 87-143 54-115 (323)
421 3ro6_B Putative chloromuconate 47.3 1.4E+02 0.0049 25.9 10.6 77 88-171 139-218 (356)
422 2hjp_A Phosphonopyruvate hydro 47.2 1.3E+02 0.0046 25.5 14.0 138 99-240 30-186 (290)
423 1q7z_A 5-methyltetrahydrofolat 47.2 84 0.0029 29.6 9.1 77 185-273 185-266 (566)
424 3h5d_A DHDPS, dihydrodipicolin 47.2 90 0.0031 26.8 8.7 84 86-170 23-109 (311)
425 3r2g_A Inosine 5'-monophosphat 47.2 1.5E+02 0.0051 26.1 10.3 68 154-240 102-169 (361)
426 3ijd_A Uncharacterized protein 47.1 1.2E+02 0.004 26.3 9.4 114 88-222 101-227 (315)
427 3q45_A Mandelate racemase/muco 46.9 1.5E+02 0.005 26.0 13.9 77 88-171 139-218 (368)
428 3tj4_A Mandelate racemase; eno 46.7 1.5E+02 0.0051 26.0 10.7 54 88-147 150-205 (372)
429 1w1z_A Delta-aminolevulinic ac 46.6 39 0.0013 29.3 6.0 55 87-143 60-121 (328)
430 3b4u_A Dihydrodipicolinate syn 46.4 1.3E+02 0.0046 25.4 14.2 114 86-207 19-136 (294)
431 3cyv_A URO-D, UPD, uroporphyri 46.4 1.2E+02 0.004 26.3 9.5 70 96-170 192-269 (354)
432 3qfe_A Putative dihydrodipicol 46.3 67 0.0023 27.7 7.8 82 86-170 27-112 (318)
433 2eja_A URO-D, UPD, uroporphyri 46.2 1.4E+02 0.0048 25.6 12.6 70 96-170 184-258 (338)
434 1tv5_A Dhodehase, dihydroorota 46.1 75 0.0026 28.9 8.3 81 88-171 308-402 (443)
435 1o5k_A DHDPS, dihydrodipicolin 46.1 76 0.0026 27.1 8.1 82 86-170 28-113 (306)
436 3p6l_A Sugar phosphate isomera 45.8 1.2E+02 0.0041 24.6 13.3 14 261-274 216-229 (262)
437 1wza_A Alpha-amylase A; hydrol 45.7 18 0.00061 33.2 4.2 68 154-223 30-115 (488)
438 3aie_A Glucosyltransferase-SI; 45.7 30 0.001 34.4 6.0 63 153-217 635-720 (844)
439 3klk_A Glucansucrase; native f 45.6 30 0.001 35.2 6.0 63 153-217 688-773 (1039)
440 2a4a_A Deoxyribose-phosphate a 45.5 1.4E+02 0.0048 25.3 12.5 147 74-237 92-256 (281)
441 3sbf_A Mandelate racemase / mu 45.5 1.5E+02 0.0051 26.3 10.2 84 88-171 132-235 (401)
442 1mzh_A Deoxyribose-phosphate a 45.4 1.2E+02 0.0041 24.5 12.3 131 87-240 16-152 (225)
443 2pgw_A Muconate cycloisomerase 45.3 1.1E+02 0.0037 27.0 9.2 70 155-238 153-222 (384)
444 3e96_A Dihydrodipicolinate syn 45.2 66 0.0022 27.7 7.6 82 86-170 28-112 (316)
445 2qw5_A Xylose isomerase-like T 45.2 1.4E+02 0.0048 25.3 10.9 78 155-240 35-128 (335)
446 3ttq_A Dextransucrase; (beta/a 45.2 29 0.00099 35.4 5.7 64 153-218 855-941 (1108)
447 2o9p_A Beta-glucosidase B; fam 45.1 50 0.0017 30.2 7.0 77 153-233 69-162 (454)
448 4dye_A Isomerase; enolase fami 45.1 1.6E+02 0.0054 26.2 10.3 77 88-171 167-246 (398)
449 2qul_A D-tagatose 3-epimerase; 45.0 1.3E+02 0.0043 24.7 10.9 77 153-239 19-107 (290)
450 1u83_A Phosphosulfolactate syn 44.9 98 0.0034 26.2 8.2 96 123-232 52-151 (276)
451 3d0c_A Dihydrodipicolinate syn 44.8 80 0.0027 27.1 8.1 81 86-170 28-112 (314)
452 2hmc_A AGR_L_411P, dihydrodipi 44.8 66 0.0022 28.2 7.5 103 86-200 42-147 (344)
453 1ccw_A Protein (glutamate muta 44.7 80 0.0028 23.3 7.1 71 154-237 44-116 (137)
454 2gou_A Oxidoreductase, FMN-bin 44.5 80 0.0027 27.8 8.2 74 88-171 247-322 (365)
455 2rfg_A Dihydrodipicolinate syn 44.4 48 0.0016 28.3 6.5 82 86-170 16-101 (297)
456 1nu5_A Chloromuconate cycloiso 44.4 1.6E+02 0.0054 25.6 11.4 77 89-171 142-222 (370)
457 2hzg_A Mandelate racemase/muco 44.3 1.7E+02 0.0057 25.9 10.8 80 89-172 145-230 (401)
458 3inp_A D-ribulose-phosphate 3- 44.3 28 0.00097 29.0 4.9 36 195-236 102-137 (246)
459 2qiw_A PEP phosphonomutase; st 44.3 1.4E+02 0.0047 24.9 12.9 134 99-240 35-188 (255)
460 2v5c_A O-GLCNACASE NAGJ; glyco 44.3 1.8E+02 0.0063 27.5 11.0 86 153-240 168-265 (594)
461 1ub3_A Aldolase protein; schif 44.2 98 0.0034 25.2 8.1 90 75-168 58-150 (220)
462 3qtp_A Enolase 1; glycolysis, 44.1 1.9E+02 0.0064 26.3 11.3 123 87-240 278-405 (441)
463 1tzz_A Hypothetical protein L1 44.1 1.5E+02 0.0052 26.1 10.0 76 88-169 164-242 (392)
464 3ndo_A Deoxyribose-phosphate a 44.1 1.3E+02 0.0045 24.6 12.5 131 87-240 25-166 (231)
465 2bhu_A Maltooligosyltrehalose 43.6 20 0.00068 34.1 4.2 61 153-215 146-217 (602)
466 1vhn_A Putative flavin oxidore 43.3 1.5E+02 0.0053 25.2 10.3 83 154-240 74-160 (318)
467 3vk5_A MOEO5; TIM barrel, tran 43.3 1.5E+02 0.0053 25.2 9.8 68 93-171 188-256 (286)
468 1lt8_A Betaine-homocysteine me 43.2 1E+02 0.0034 27.7 8.6 62 156-232 170-234 (406)
469 3tqp_A Enolase; energy metabol 43.0 1.3E+02 0.0045 27.1 9.5 124 87-240 262-390 (428)
470 1jae_A Alpha-amylase; glycosid 43.0 12 0.0004 34.3 2.5 33 181-215 66-99 (471)
471 2y88_A Phosphoribosyl isomeras 42.8 25 0.00085 28.7 4.3 72 92-171 150-225 (244)
472 3vav_A 3-methyl-2-oxobutanoate 42.7 1.5E+02 0.0053 25.0 13.4 139 87-240 71-215 (275)
473 3r0u_A Enzyme of enolase super 42.7 1.8E+02 0.006 25.6 12.1 75 88-169 141-220 (379)
474 1ji1_A Alpha-amylase I; beta/a 42.5 24 0.00081 33.7 4.6 62 154-217 194-270 (637)
475 1icp_A OPR1, 12-oxophytodienoa 42.4 1.1E+02 0.0039 27.0 8.8 141 85-240 154-330 (376)
476 2hjp_A Phosphonopyruvate hydro 42.3 83 0.0028 26.8 7.6 81 156-240 27-110 (290)
477 3mwc_A Mandelate racemase/muco 42.3 1.7E+02 0.0058 26.0 10.1 73 89-171 163-238 (400)
478 3m07_A Putative alpha amylase; 42.2 27 0.00093 33.3 5.0 61 153-215 156-227 (618)
479 1jvn_A Glutamine, bifunctional 42.1 63 0.0021 30.3 7.4 97 92-208 453-551 (555)
480 2nql_A AGR_PAT_674P, isomerase 42.0 1.3E+02 0.0044 26.5 9.2 77 89-172 164-243 (388)
481 2yc6_A Triosephosphate isomera 41.9 1.1E+02 0.0037 25.6 8.1 57 156-223 80-136 (257)
482 3r12_A Deoxyribose-phosphate a 41.8 1.5E+02 0.0053 24.7 10.0 76 87-170 169-244 (260)
483 1vyr_A Pentaerythritol tetrani 41.7 1.1E+02 0.0037 26.9 8.6 74 88-171 248-323 (364)
484 3ahx_A Beta-glucosidase A; cel 41.7 68 0.0023 29.3 7.3 56 153-211 61-119 (453)
485 3bmv_A Cyclomaltodextrin gluca 41.7 20 0.00068 34.6 4.0 34 180-215 107-141 (683)
486 2zvr_A Uncharacterized protein 41.6 76 0.0026 26.3 7.3 80 124-207 41-129 (290)
487 1r2r_A TIM, triosephosphate is 41.6 1.1E+02 0.0038 25.4 8.1 57 156-223 79-135 (248)
488 3oix_A Putative dihydroorotate 41.6 1.8E+02 0.0061 25.4 10.0 110 122-237 111-224 (345)
489 1xg4_A Probable methylisocitra 41.5 51 0.0018 28.2 6.2 52 187-239 62-113 (295)
490 1zfj_A Inosine monophosphate d 41.4 2E+02 0.007 26.0 15.4 127 93-240 234-365 (491)
491 3tva_A Xylose isomerase domain 41.4 49 0.0017 27.4 6.1 144 89-239 100-258 (290)
492 3m9y_A Triosephosphate isomera 41.4 1E+02 0.0036 25.7 7.9 57 156-223 82-138 (254)
493 3pao_A Adenosine deaminase; st 41.4 1.3E+02 0.0045 26.0 8.9 13 193-207 229-241 (326)
494 3ucq_A Amylosucrase; thermosta 41.2 22 0.00076 34.1 4.2 61 153-215 113-185 (655)
495 3g8r_A Probable spore coat pol 41.2 1.8E+02 0.0063 25.4 10.1 75 89-171 19-118 (350)
496 1s2w_A Phosphoenolpyruvate pho 41.2 1.7E+02 0.0057 25.0 13.5 137 100-240 35-190 (295)
497 3bjs_A Mandelate racemase/muco 41.0 2E+02 0.0068 25.8 14.9 74 88-168 183-260 (428)
498 3eoo_A Methylisocitrate lyase; 40.8 1.7E+02 0.0059 25.0 13.5 100 102-202 40-151 (298)
499 3qst_A Triosephosphate isomera 40.7 1E+02 0.0035 25.8 7.8 111 88-223 18-137 (255)
500 1o5x_A TIM, triosephosphate is 40.6 1.1E+02 0.0038 25.5 7.9 56 157-223 80-135 (248)
No 1
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=99.96 E-value=4.7e-29 Score=227.07 Aligned_cols=209 Identities=21% Similarity=0.347 Sum_probs=173.7
Q ss_pred hcHHHHHHHHHh---cCchhhhhhcCCCCcccc-ccCceeE--eeeeCcccCCCCcCcccCCCC--C-CCCChhHHHHHH
Q psy2895 27 DNFNKTKNILRA---NNLVTVCEEASCPNIGEC-FGRGVAT--FMIMGSICTRRCKFCNISHGR--P-DPLDIEEPKKIA 97 (293)
Q Consensus 27 ~~~~~~~~l~~~---~~~~~l~~~a~~~~~~~~-~~~~~~~--~~~~t~~C~~~C~fC~~~~~~--~-~~~~~eei~~~~ 97 (293)
-+.+++..|+.. .++..|+..|+ .++++ +++.+.+ .+.+|++|+.+|.||+++..+ . ..+++++|++.+
T Consensus 23 l~~~e~~~l~~~~~~~~~~~L~~~A~--~~r~~~~g~~v~~~~~i~~t~~C~~~C~fC~~~~~~~~~~~~ls~eei~~~~ 100 (350)
T 3t7v_A 23 LTDNDLRTLLSLESKEGLERLYSAAR--KVRDHYFGNRVFLNCFIYFSTYCKNQCSFCYYNCRNEINRYRLTMEEIKETC 100 (350)
T ss_dssp CCHHHHHHHHTCCSHHHHHHHHHHHH--HHHHHHHTTEEEEEEEEEEECCCCCCCTTCTTCTTSCCCCCBCCHHHHHHHH
T ss_pred CCHHHHHHHhcCCChhHHHHHHHHHH--HHHHHHCCCEEEEEEeeecCCCcCCCCCcCCCcCcCCCCceeCCHHHHHHHH
Confidence 568888888864 34566888888 77774 4555443 355799999999999997643 2 248999999999
Q ss_pred HHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeecccc-ch
Q psy2895 98 YTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIET-VP 176 (293)
Q Consensus 98 ~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~les-s~ 176 (293)
+++.+.|++.|+++||+.|.+. .+.+++.++++.+++.+ ++.+.+ +++..+ ++.++.|+++|++++.+++|+ ++
T Consensus 101 ~~~~~~G~~~i~l~gGe~p~~~-~~~~~~~~l~~~ik~~~-~i~i~~-s~g~~~--~e~l~~L~~aG~~~i~i~lEt~~~ 175 (350)
T 3t7v_A 101 KTLKGAGFHMVDLTMGEDPYYY-EDPNRFVELVQIVKEEL-GLPIMI-SPGLMD--NATLLKAREKGANFLALYQETYDT 175 (350)
T ss_dssp HHHTTSCCSEEEEEECCCHHHH-HSTHHHHHHHHHHHHHH-CSCEEE-ECSSCC--HHHHHHHHHTTEEEEECCCBCSCH
T ss_pred HHHHHCCCCEEEEeeCCCCccc-cCHHHHHHHHHHHHhhc-CceEEE-eCCCCC--HHHHHHHHHcCCCEEEEeeecCCH
Confidence 9999999999999999854321 12578999999999765 345543 346666 899999999999999999999 69
Q ss_pred HHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEeecCCC
Q psy2895 177 RLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYLM 244 (293)
Q Consensus 177 ~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~~~~~ 244 (293)
++|+.+++++++++++++++.++++ |+.+++++|+|+|||.+|+.++++++++++++.+++++|.+
T Consensus 176 ~~~~~i~~~~~~~~~l~~i~~a~~~--Gi~v~~~~i~Glget~e~~~~~l~~l~~l~~~~v~~~~f~p 241 (350)
T 3t7v_A 176 ELYRKLRVGQSFDGRVNARRFAKQQ--GYCVEDGILTGVGNDIESTILSLRGMSTNDPDMVRVMTFLP 241 (350)
T ss_dssp HHHHHHSTTCCHHHHHHHHHHHHHH--TCEEEEEEEESSSCCHHHHHHHHHHHHHTCCSEEEEEECCC
T ss_pred HHHHHhCCCCCHHHHHHHHHHHHHc--CCeEccceEeecCCCHHHHHHHHHHHHhCCCCEEEecceee
Confidence 9999999999999999999999999 99999999999999999999999999999999999986644
No 2
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=99.96 E-value=2.7e-27 Score=215.10 Aligned_cols=208 Identities=22% Similarity=0.334 Sum_probs=173.0
Q ss_pred hcHHHHHHHHHhcC---chhhhhhcCCCCcccc-ccCceeEe--eeeCcccCCCCcCcccCCCCC----CCCChhHHHHH
Q psy2895 27 DNFNKTKNILRANN---LVTVCEEASCPNIGEC-FGRGVATF--MIMGSICTRRCKFCNISHGRP----DPLDIEEPKKI 96 (293)
Q Consensus 27 ~~~~~~~~l~~~~~---~~~l~~~a~~~~~~~~-~~~~~~~~--~~~t~~C~~~C~fC~~~~~~~----~~~~~eei~~~ 96 (293)
-+.+++..|+...+ +..++..|+ .++++ +++.+.+. +.+|++|+++|.||+++.... ..+++++|.+.
T Consensus 15 l~~~e~~~ll~~~~~~~~~~l~~~A~--~ir~~~~g~~v~~~~~i~~t~~C~~~C~fC~~~~~~~~~~~~~ls~eei~~~ 92 (348)
T 3iix_A 15 FTREVLKEALSINDRGFNEALFKLAD--EIRRKYVGDEVHIRAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIVER 92 (348)
T ss_dssp CCHHHHHHHHHCCCHHHHHHHHHHHH--HHHHHHHCSEEEEEEEEEEECCCSCCCTTCTTCTTCCSSCCCBCCHHHHHHH
T ss_pred CCHHHHHHHHcCCCHHHHHHHHHHHH--HHHHHHcCCEEEEEEEeEecCCcCCcCccCCCCCCCCCcCceeCCHHHHHHH
Confidence 45788888886543 455777787 67764 55555433 567999999999999876432 24799999999
Q ss_pred HHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeecccc-c
Q psy2895 97 AYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIET-V 175 (293)
Q Consensus 97 ~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~les-s 175 (293)
++.+.+.|++.|+|+||++|.+ ..+++.++++.+++. ++.+.+ +++.++ ++.++.|+++|++++.+++|+ +
T Consensus 93 i~~~~~~g~~~i~~~gGe~p~~---~~~~~~~li~~i~~~--~~~i~~-s~g~l~--~e~l~~L~~ag~~~v~i~let~~ 164 (348)
T 3iix_A 93 ARLAVQFGAKTIVLQSGEDPYX---MPDVISDIVKEIKKM--GVAVTL-SLGEWP--REYYEKWKEAGADRYLLRHETAN 164 (348)
T ss_dssp HHHHHHTTCSEEEEEESCCGGG---TTHHHHHHHHHHHTT--SCEEEE-ECCCCC--HHHHHHHHHHTCCEEECCCBCSC
T ss_pred HHHHHHCCCCEEEEEeCCCCCc---cHHHHHHHHHHHHhc--CceEEE-ecCCCC--HHHHHHHHHhCCCEEeeeeeeCC
Confidence 9999999999999999995433 247899999999986 455653 345666 899999999999999999999 6
Q ss_pred hHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhCCCCEEEeecCCCCCC
Q psy2895 176 PRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNHNIDILTIGQYLMPSR 247 (293)
Q Consensus 176 ~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l~~~~i~i~~~~~p~~ 247 (293)
+++++.+++++++++++++++.++++ |+.+++++|+|+ |||.+++.++++++++++++.++++++. |.+
T Consensus 165 ~~~~~~i~~~~~~~~~~~~i~~~~~~--Gi~v~~~~i~G~p~et~e~~~~~~~~l~~l~~~~i~i~~~~-p~~ 234 (348)
T 3iix_A 165 PVLHRKLRPDTSFENRLNCLLTLKEL--GYETGAGSMVGLPGQTIDDLVDDLLFLKEHDFDMVGIGPFI-PHP 234 (348)
T ss_dssp HHHHHHHSTTSCHHHHHHHHHHHHHT--TCEEEECBEESCTTCCHHHHHHHHHHHHHHTCSEECCEECC-CCT
T ss_pred HHHHHHhCCCcCHHHHHHHHHHHHHh--CCeeccceEEeCCCCCHHHHHHHHHHHHhcCCCEEeeeeee-cCC
Confidence 99999999988999999999999999 999999999999 9999999999999999999999998554 433
No 3
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=99.95 E-value=9.7e-27 Score=213.27 Aligned_cols=230 Identities=17% Similarity=0.248 Sum_probs=177.4
Q ss_pred hcHHHHHHHHHhcCchhhhhhcCCCCccc-ccc-Ccee--Eeeee-CcccCCCCcCcccCCCC------CCCCChhHHHH
Q psy2895 27 DNFNKTKNILRANNLVTVCEEASCPNIGE-CFG-RGVA--TFMIM-GSICTRRCKFCNISHGR------PDPLDIEEPKK 95 (293)
Q Consensus 27 ~~~~~~~~l~~~~~~~~l~~~a~~~~~~~-~~~-~~~~--~~~~~-t~~C~~~C~fC~~~~~~------~~~~~~eei~~ 95 (293)
-+.+++..|++ .++.+|+..|+ .+++ +|+ +.+. ..+.+ |++|+.+|.||.++... ...+++++|.+
T Consensus 30 ls~~e~~~l~~-~~~~~L~~~A~--~~~~~~~~~~~v~~~~~i~i~t~~C~~~C~yC~~~~~~~~~~~~~~~~s~eei~~ 106 (369)
T 1r30_A 30 WTLSQVTELFE-KPLLDLLFEAQ--QVHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLE 106 (369)
T ss_dssp CCSTTTHHHHH-SCHHHHHHHHH--HHHHHHSCTTCCEEEEEEEEECSCBSSCCSSCSCBTTSCTTCCCCCCCCHHHHHH
T ss_pred CCHHHHHHHHh-ccHHHHHHHHH--HHHHHhcCCCEEEEEEEEEEECCCCcccCccCCCCCcCCCCCcccccCCHHHHHH
Confidence 44556666665 46777777777 6655 554 4332 23444 89999999999997631 23589999999
Q ss_pred HHHHHHHCCCcEEEEeeec--CCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeeccc
Q psy2895 96 IAYTINKLKLNYVVITSVN--RDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIE 173 (293)
Q Consensus 96 ~~~~~~~~G~~~i~l~gg~--~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~le 173 (293)
.++.+.+.|++.|+++||. +.. ...+++.++++.+++.+ ..+.+ +++.++ ++.++.|+++|++++++++|
T Consensus 107 ~~~~~~~~g~~~i~~~gg~~~p~~---~~~~~l~~ll~~ik~~g--~~i~~-t~G~l~--~e~l~~L~~aGvd~v~i~le 178 (369)
T 1r30_A 107 SARKAKAAGSTRFCMGAAWKNPHE---RDMPYLEQMVQGVKAMG--LEACM-TLGTLS--ESQAQRLANAGLDYYNHNLD 178 (369)
T ss_dssp HHHHHHHTTCSEEEEEECCSSCCT---TTHHHHHHHHHHHHHTT--SEEEE-ECSSCC--HHHHHHHHHHCCCEEECCCB
T ss_pred HHHHHHHcCCcEEEEEeCCCCCCc---CCHHHHHHHHHHHHHcC--CeEEE-ecCCCC--HHHHHHHHHCCCCEEeecCc
Confidence 9999999999999998874 322 34689999999999863 45543 567776 89999999999999999999
Q ss_pred cchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCC--CCEEEeecCCCCCCCccc
Q psy2895 174 TVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHN--IDILTIGQYLMPSRLHLP 251 (293)
Q Consensus 174 ss~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~--~~~i~i~~~~~p~~~~~a 251 (293)
+++++|+.+++++++++++++++.++++ |+.+++++|+|+|||.+|+.++++++++++ ++.++++ .+.|.+++.-
T Consensus 179 s~~e~~~~i~~~~~~~~~l~~i~~a~~~--Gi~v~~~~I~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~-~l~p~~gT~l 255 (369)
T 1r30_A 179 TSPEFYGNIITTRTYQERLDTLEKVRDA--GIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPIN-MLVKVKGTPL 255 (369)
T ss_dssp SCHHHHHHHCCSSCHHHHHHHHHHHHHH--HCEEECCEEECSSCCHHHHHHHHHHHHSSSSCCSEEEEE-ECCCCTTSTT
T ss_pred CCHHHHHHhCCCCCHHHHHHHHHHHHHc--CCeeeeeeEeeCCCCHHHHHHHHHHHHhhcCCCCEEEee-eeeecCCCcC
Confidence 9999999999989999999999999999 999999999999999999999999999998 8899998 4556554311
Q ss_pred -cccccChhHHHHHHHHHHH
Q psy2895 252 -VHRYLHPKFFEKFKKIAYK 270 (293)
Q Consensus 252 -~~r~~~p~~~~~~~~~~~~ 270 (293)
-.....++++.++.+.++.
T Consensus 256 ~~~~~~~~~~~~~~~~~~r~ 275 (369)
T 1r30_A 256 ADNDDVDAFDFIRTIAVARI 275 (369)
T ss_dssp SSCCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHH
Confidence 1122334444444444443
No 4
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=99.95 E-value=5.5e-27 Score=209.46 Aligned_cols=187 Identities=13% Similarity=0.257 Sum_probs=143.4
Q ss_pred ceeEeeeeCcccCCCCcCcccCCC--CCCCCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCC--ChhHHHHHHHHHHh
Q psy2895 60 GVATFMIMGSICTRRCKFCNISHG--RPDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDG--GSSHFVSCIKHIRK 135 (293)
Q Consensus 60 ~~~~~~~~t~~C~~~C~fC~~~~~--~~~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~--~~~~~~~ll~~i~~ 135 (293)
+..+++.+++|||++|+||.++.. +.+.+++++|+++++.+.+.|+++|.|+|++...+... +...+.++++.+++
T Consensus 3 ~~~~~v~is~GC~~~C~fC~~~~~~g~~r~r~~e~i~~ei~~l~~~G~~ei~l~g~~~~~yG~~~~~~~~l~~Ll~~l~~ 82 (304)
T 2qgq_A 3 RPYAYVKISDGCDRGCTFCSIPSFKGSLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPDLLRRLNS 82 (304)
T ss_dssp CSEEEEESBCCC-------------CCCCBCCHHHHHHHHHHHHHTTCCEEEEECTTGGGTTHHHHSSCCHHHHHHHHHT
T ss_pred CEEEEEEECCCCCCcCccCCccccCCCceeeCHHHHHHHHHHHHHCCCcEEEEEeEcccccCCCCCcHHHHHHHHHHHHh
Confidence 456677889999999999999874 34678999999999999999999999998764222100 12468899999987
Q ss_pred hCCCc-EEEEEc--CCCcCcHHHHHHHHHHcC--CCeeeecccc-chHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeE
Q psy2895 136 LSTKI-KIEILI--PDFRNQINHVLKIFKQAL--PDVLNHNIET-VPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKS 209 (293)
Q Consensus 136 ~~~~~-~i~~~~--~~~~~~~~e~l~~l~~aG--~~~i~~~les-s~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~ 209 (293)
. +++ ++++.+ |+.++ ++.++.|+++| ++++++++|| ++++++.|+|+++.+++++.++.+++++||+.+++
T Consensus 83 ~-~gi~~ir~~~~~p~~l~--~e~l~~l~~~g~~~~~l~i~lqs~s~~vl~~m~r~~t~e~~~~~i~~l~~~~~gi~i~~ 159 (304)
T 2qgq_A 83 L-NGEFWIRVMYLHPDHLT--EEIISAMLELDKVVKYFDVPVQHGSDKILKLMGRTKSSEELKKMLSSIRERFPDAVLRT 159 (304)
T ss_dssp S-SSSCEEEECCCCGGGCC--HHHHHHHHHCTTBCCEEECCCBCSCHHHHHHTTCCSCHHHHHHHHHHHHHHCTTCEEEE
T ss_pred c-CCCcEEEEeeeecccCC--HHHHHHHHhCCCCccEEEEecccCCHHHHHHhCCCCCHHHHHHHHHHHHhhCCCCEEEE
Confidence 5 333 677643 45566 89999999999 9999999999 89999999999999999999999999878999999
Q ss_pred eEEeec-CCCHHHHHHHHHHHHhCCCCEEEeecCCCCCCCcc
Q psy2895 210 GIMVGL-GENDEEILTVIHDMRNHNIDILTIGQYLMPSRLHL 250 (293)
Q Consensus 210 ~~ivG~-gEt~ed~~~~l~~l~~l~~~~i~i~~~~~p~~~~~ 250 (293)
++|+|+ |||.+|+.++++++++++++.+++++| .|.+++.
T Consensus 160 ~~IvG~PgEt~ed~~~t~~~l~~l~~~~v~~~~~-~p~pgT~ 200 (304)
T 2qgq_A 160 SIIVGFPGETEEDFEELKQFVEEIQFDKLGAFVY-SDEEGTV 200 (304)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHCCSEEEEEEC-CC-----
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEEe-eCCCCCh
Confidence 999999 999999999999999999999999855 5666554
No 5
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=99.93 E-value=1.4e-24 Score=204.10 Aligned_cols=218 Identities=14% Similarity=0.194 Sum_probs=170.0
Q ss_pred eeEeeeeCcccCCCCcCcccCCCC--CC---CCChhHHHHHHHHHHHC----CCcEEEEeeecCCCCCCCChhHHHHHHH
Q psy2895 61 VATFMIMGSICTRRCKFCNISHGR--PD---PLDIEEPKKIAYTINKL----KLNYVVITSVNRDDLHDGGSSHFVSCIK 131 (293)
Q Consensus 61 ~~~~~~~t~~C~~~C~fC~~~~~~--~~---~~~~eei~~~~~~~~~~----G~~~i~l~gg~~~~l~~~~~~~~~~ll~ 131 (293)
...|+.+. +|+.+|.||.++... .. ....+.+.++++.+.+. ++..|+|+||++..+ +.+.+.++++
T Consensus 53 ~~lYihIp-fC~~~C~yC~~~~~~~~~~~~~~~~~~~l~~Ei~~~~~~~~~~~i~~i~fgGGtpt~l---~~~~l~~ll~ 128 (457)
T 1olt_A 53 LSLYVHIP-FCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGGGTPTYL---NKAQISRLMK 128 (457)
T ss_dssp EEEEEEEC-EESSCCTTCCSSCEECSCTHHHHHHHHHHHHHHHHHGGGGTTCCEEEEEEEESCGGGS---CHHHHHHHHH
T ss_pred eEEEEEcC-CCCCCCCCCCCceeccCCcchHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCCcccC---CHHHHHHHHH
Confidence 45566654 799999999997632 11 12356777777766543 357889999885322 2578999999
Q ss_pred HHHhhCC---CcEEEEEc-CCCcCcHHHHHHHHHHcCCCeeeecccc-chHHHhhcCCCCCHHHHHHHHHHHHHhCCCce
Q psy2895 132 HIRKLST---KIKIEILI-PDFRNQINHVLKIFKQALPDVLNHNIET-VPRLYKKVRPGSDYKHSLNLLKNFKKLYPNIL 206 (293)
Q Consensus 132 ~i~~~~~---~~~i~~~~-~~~~~~~~e~l~~l~~aG~~~i~~~les-s~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~ 206 (293)
.+++.++ +..+++.+ |+.++ ++.++.|+++|++++++|+|| ++++++.|+|+++.++++++++.++++ |+.
T Consensus 129 ~i~~~~~~~~~~eitie~~p~~l~--~e~l~~L~~~G~~rislGvQS~~~~~l~~i~R~~~~~~~~~ai~~~r~~--G~~ 204 (457)
T 1olt_A 129 LLRENFQFNADAEISIEVDPREIE--LDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREI--GFT 204 (457)
T ss_dssp HHHHHSCEEEEEEEEEEECSSSCC--THHHHHHHHTTCCEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHT--TCC
T ss_pred HHHHhCCCCCCcEEEEEEccCcCC--HHHHHHHHHcCCCEEEEeeccCCHHHHHHhCCCCCHHHHHHHHHHHHHc--CCC
Confidence 9998653 24566655 57676 789999999999999999999 799999999999999999999999999 997
Q ss_pred -eeEeEEeec-CCCHHHHHHHHHHHHhCCCCEEEeecCCCCCCCcccccc----ccCh--hH----HHHHHHHHHHhccc
Q psy2895 207 -TKSGIMVGL-GENDEEILTVIHDMRNHNIDILTIGQYLMPSRLHLPVHR----YLHP--KF----FEKFKKIAYKLGFK 274 (293)
Q Consensus 207 -~~~~~ivG~-gEt~ed~~~~l~~l~~l~~~~i~i~~~~~p~~~~~a~~r----~~~p--~~----~~~~~~~~~~~G~~ 274 (293)
+++++|+|+ |||.+++.++++++.++++++++++++ .|.|.+.+..+ ...| ++ +..+.+...+.|+.
T Consensus 205 ~v~~dlI~GlPget~e~~~~tl~~~~~l~~~~i~~y~l-~~~p~t~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~~~Gy~ 283 (457)
T 1olt_A 205 STNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNY-AHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGYQ 283 (457)
T ss_dssp SCEEEEEESCTTCCHHHHHHHHHHHHHHCCSEEEEEEC-CCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHHTTCE
T ss_pred cEEEEEEcCCCCCCHHHHHHHHHHHHhcCcCEEEeecC-cCCcCchhHhhccccCCCcCHHHHHHHHHHHHHHHHHCCCe
Confidence 999999999 999999999999999999999999855 45554433221 1223 22 44556667778999
Q ss_pred chhcccccccccc
Q psy2895 275 NVLVGSMIRSSYM 287 (293)
Q Consensus 275 ~~~~~~~~~~~~~ 287 (293)
++++++|+++.+.
T Consensus 284 ~yeis~fa~~~~~ 296 (457)
T 1olt_A 284 FIGMDHFARPDDE 296 (457)
T ss_dssp EEETTEEECTTSH
T ss_pred EEEechhcCCCch
Confidence 9999999998764
No 6
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=99.85 E-value=3.3e-20 Score=167.88 Aligned_cols=185 Identities=15% Similarity=0.250 Sum_probs=146.9
Q ss_pred ccccccCce-eEeeeeCcccCCCCcCcccCC----CC-----CCCCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCC
Q psy2895 53 IGECFGRGV-ATFMIMGSICTRRCKFCNISH----GR-----PDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGG 122 (293)
Q Consensus 53 ~~~~~~~~~-~~~~~~t~~C~~~C~fC~~~~----~~-----~~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~ 122 (293)
+.+.|+... .+.+.+|++||++|.||.... +. ...++.|++.+.++.+.+.|++.|.|+||+| .+.
T Consensus 5 l~d~~gr~~~~l~i~~T~~CNl~C~yC~~~~~~~~~~~~~~~~~~ls~e~i~~~i~~~~~~g~~~i~~tGGEP-ll~--- 80 (340)
T 1tv8_A 5 IKDKLGRPIRDLRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP-LMR--- 80 (340)
T ss_dssp CBCTTSCBCCEEEEECCSCCSCCCTTTSCTTTSSTTCCCCCGGGSCCHHHHHHHHHHHHHTTCCEEEEESSCG-GGS---
T ss_pred CcCCCCCccCeEEEEeCCCcCCcCCCCCcCcccCCCcccCCccCCCCHHHHHHHHHHHHHCCCCEEEEeCCCc-cch---
Confidence 345566654 344667999999999998865 21 2358999999999999999999999999996 232
Q ss_pred hhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeecccc-chHHHhhcCCCC-CHHHHHHHHHHHHH
Q psy2895 123 SSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIET-VPRLYKKVRPGS-DYKHSLNLLKNFKK 200 (293)
Q Consensus 123 ~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~les-s~~~~~~i~~~~-~~e~~l~~i~~~~~ 200 (293)
..+.++++.+++......+.+.|++..- .+.++.|+++|++++.+++++ +++.++.+++.. +++++++.++.+++
T Consensus 81 -~~l~~li~~~~~~~~~~~i~i~TNG~ll--~~~~~~L~~~g~~~v~iSld~~~~~~~~~i~~~~~~~~~v~~~i~~l~~ 157 (340)
T 1tv8_A 81 -RDLDVLIAKLNQIDGIEDIGLTTNGLLL--KKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATS 157 (340)
T ss_dssp -TTHHHHHHHHTTCTTCCEEEEEECSTTH--HHHHHHHHHHTCCEEEEECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHH
T ss_pred -hhHHHHHHHHHhCCCCCeEEEEeCccch--HHHHHHHHHCCCCEEEEecCCCCHHHHHHhhCCCCCHHHHHHHHHHHHH
Confidence 2467899998876432267787876543 568999999999999999999 689999998777 99999999999999
Q ss_pred hCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEeecCCCCCCC
Q psy2895 201 LYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYLMPSRL 248 (293)
Q Consensus 201 ~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~~~~~p~~~ 248 (293)
+ |+.+...+++.-|++.+++.++++++++++++ +.+.++ .|.++
T Consensus 158 ~--g~~v~i~~vv~~g~n~~ei~~~~~~~~~~g~~-~~~i~~-~p~~~ 201 (340)
T 1tv8_A 158 I--GLNVKVNVVIQKGINDDQIIPMLEYFKDKHIE-IRFIEF-MDVGN 201 (340)
T ss_dssp T--TCEEEEEEEECTTTTGGGHHHHHHHHHHTTCC-EEEEEC-CCBCS
T ss_pred C--CCCEEEEEEEeCCCCHHHHHHHHHHHHhcCCe-EEEEEe-eEcCC
Confidence 9 99888887774488999999999999999998 444324 45543
No 7
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=99.81 E-value=5.4e-19 Score=151.85 Aligned_cols=202 Identities=14% Similarity=0.161 Sum_probs=149.7
Q ss_pred ceeEeeeeCcccCCCCcCcccCCC----CCCCCChhHHHHHHHHHHHC---CCcEEEEeeecCCCCCCCChhHHHHHHHH
Q psy2895 60 GVATFMIMGSICTRRCKFCNISHG----RPDPLDIEEPKKIAYTINKL---KLNYVVITSVNRDDLHDGGSSHFVSCIKH 132 (293)
Q Consensus 60 ~~~~~~~~t~~C~~~C~fC~~~~~----~~~~~~~eei~~~~~~~~~~---G~~~i~l~gg~~~~l~~~~~~~~~~ll~~ 132 (293)
+..++ ++|++||.+|.||..+.. ..+.++++++.+.++.+.+. ++..|.|+||+| .+ ..+.+.++++.
T Consensus 19 g~~~~-i~t~~Cn~~C~~C~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~i~~~GGEP-~l---~~~~l~~l~~~ 93 (245)
T 3c8f_A 19 GIRFI-TFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMNASGGGVTASGGEA-IL---QAEFVRDWFRA 93 (245)
T ss_dssp SEEEE-EEESCCSCCCTTCSCGGGCCTTCSEEECHHHHHHHHGGGHHHHTSTTCEEEEEESCG-GG---GHHHHHHHHHH
T ss_pred CcEEE-EEeCCCCCCCCCCCCchhcccccCccCCHHHHHHHHHHhhhhhcCCCCeEEEECCCc-CC---CHHHHHHHHHH
Confidence 34444 468899999999998642 12457899999998877654 468999999985 23 13457899999
Q ss_pred HHhhCCCcEEEEEcCCCc--CcHHHHHHHHHHcCCCeeeecccc-chHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeE
Q psy2895 133 IRKLSTKIKIEILIPDFR--NQINHVLKIFKQALPDVLNHNIET-VPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKS 209 (293)
Q Consensus 133 i~~~~~~~~i~~~~~~~~--~~~~e~l~~l~~aG~~~i~~~les-s~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~ 209 (293)
+++. ++.+.+.|+++. . .+.++.|.++ ++.+.+++++ ++++++.+++. +++++++.++.++++ |+.+..
T Consensus 94 ~~~~--~~~i~i~Tng~~~~~--~~~~~~l~~~-~~~v~isld~~~~~~~~~~~~~-~~~~~~~~i~~l~~~--g~~v~i 165 (245)
T 3c8f_A 94 CKKE--GIHTCLDTNGFVRRY--DPVIDELLEV-TDLVMLDLKQMNDEIHQNLVGV-SNHRTLEFAKYLANK--NVKVWI 165 (245)
T ss_dssp HHTT--TCCEEEEECCCCCCC--CHHHHHHHHT-CSEEEEECCCSSHHHHHHHHSS-CSHHHHHHHHHHHHH--TCCEEE
T ss_pred HHHc--CCcEEEEeCCCcCcC--HHHHHHHHHh-CCEEEEeCCCCCHHHhhhccCC-CHHHHHHHHHHHHhc--CCEEEE
Confidence 9886 456778777655 4 5678888887 8999999999 79999999754 579999999999999 887665
Q ss_pred eEE--eecCCCHHHHHHHHHHHHhCCC-CEEEeecCCCCCCCc--------ccc--ccccChhHHHHHHHHHHHhcccc
Q psy2895 210 GIM--VGLGENDEEILTVIHDMRNHNI-DILTIGQYLMPSRLH--------LPV--HRYLHPKFFEKFKKIAYKLGFKN 275 (293)
Q Consensus 210 ~~i--vG~gEt~ed~~~~l~~l~~l~~-~~i~i~~~~~p~~~~--------~a~--~r~~~p~~~~~~~~~~~~~G~~~ 275 (293)
.++ .|.+++.+++.+++++++++++ ..+.+.++. |.+.. .+. .....++++.++.+.+++.|+..
T Consensus 166 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v 243 (245)
T 3c8f_A 166 RYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYH-ELGKHKWVAMGEEYKLDGVKPPKKETMERVKGILEQYGHKV 243 (245)
T ss_dssp EEEECTTTTCCHHHHHHHHHHHHHHCCEEEEEEEECC-CCSHHHHHHTTCCCTTTTCCCCCHHHHHHHHHHHHTTTCCB
T ss_pred EEeecCCCCCCHHHHHHHHHHHHhcCCCceeEEEecc-ccChhHHHhhCcccccccCCCCCHHHHHHHHHHHHhcCCee
Confidence 544 3446889999999999999996 777777554 32211 111 12234566778888888888764
No 8
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=99.73 E-value=8.5e-17 Score=145.64 Aligned_cols=189 Identities=14% Similarity=0.084 Sum_probs=140.4
Q ss_pred cccCCCCcCcccCCC-------CCCCCChhHHHHHHHHHHHC--------------------CCcEEEEe-eecCCCCCC
Q psy2895 69 SICTRRCKFCNISHG-------RPDPLDIEEPKKIAYTINKL--------------------KLNYVVIT-SVNRDDLHD 120 (293)
Q Consensus 69 ~~C~~~C~fC~~~~~-------~~~~~~~eei~~~~~~~~~~--------------------G~~~i~l~-gg~~~~l~~ 120 (293)
++||++|.||..+.. ..+.+++++|++.+..+... .++.|+|+ ||+| .+.
T Consensus 79 ~gCnl~C~fC~~~~~~~~~~~~~~~~~~~eei~~~i~~~~~~~~~~~~g~~~v~~~~~~e~~~~~~v~~sggGEP-ll~- 156 (342)
T 2yx0_A 79 AWCTHNCIFCWRPMENFLGTELPQPWDDPAFIVEESIKAQRKLLIGYKGNPKVDKKKFEEAWNPTHAAISLSGEP-MLY- 156 (342)
T ss_dssp SCCSBCCTTCCCSSSSCSCSSCCSSCCCHHHHHHHHHHHHHHHHTTCC--CCSCHHHHHHHTSCCEEEECSSSCG-GGS-
T ss_pred hhhhCcCcccCCCCCCCcccccccCcCCHHHHHHHHHHHHHHHhhccCCCcccchhhhhhccCCCEEEEcCCCcc-cch-
Confidence 799999999998642 22457889998877665321 25679997 7774 332
Q ss_pred CChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcC--CCeeeecccc-chHHHhhcCC---CCCHHHHHHH
Q psy2895 121 GGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQAL--PDVLNHNIET-VPRLYKKVRP---GSDYKHSLNL 194 (293)
Q Consensus 121 ~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG--~~~i~~~les-s~~~~~~i~~---~~~~e~~l~~ 194 (293)
..+.++++.+++. ++.+.+.|++.. ++.++.|+++| ++.+.+++++ ++++++.+++ +++++++++.
T Consensus 157 ---~~l~~ll~~~~~~--g~~i~l~TNG~~---~e~l~~L~~~g~~~~~l~isld~~~~e~~~~i~~~~~~~~~~~~~~~ 228 (342)
T 2yx0_A 157 ---PYMGDLVEEFHKR--GFTTFIVTNGTI---PERLEEMIKEDKLPTQLYVSITAPDIETYNSVNIPMIPDGWERILRF 228 (342)
T ss_dssp ---TTHHHHHHHHHHT--TCEEEEEECSCC---HHHHHHHHHTTCCCSEEEEEECCSSHHHHHHHHCBSSSCHHHHHHHH
T ss_pred ---hhHHHHHHHHHHC--CCcEEEEcCCCc---HHHHHHHHhcCCCCCEEEEEccCCCHHHHHHHhCCCcccHHHHHHHH
Confidence 2688899988876 567888887655 67899999988 9999999999 6999999986 4579999999
Q ss_pred HHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEeecCCCCCCCc-ccc--ccccChhHHHHHHHHHHH
Q psy2895 195 LKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYLMPSRLH-LPV--HRYLHPKFFEKFKKIAYK 270 (293)
Q Consensus 195 i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~~~~~p~~~~-~a~--~r~~~p~~~~~~~~~~~~ 270 (293)
++.+++. |+.+...+++.-|+|.+++.++++++++++++.+.+.+|. |.+.. .+. .....++++.++.+.+.+
T Consensus 229 i~~l~~~--g~~v~i~~~l~~g~n~~~~~~l~~~l~~~~~~~i~l~~~~-~~~~~~~~l~~~~~~~~e~~~~~~~~l~~ 304 (342)
T 2yx0_A 229 LELMRDL--PTRTVVRLTLVKGENMHSPEKYAKLILKARPMFVEAKAYM-FVGYSRNRLTINNMPSHQDIREFAEALVK 304 (342)
T ss_dssp HHHHTTC--SSEEEEEEEECTTTTCCCHHHHHHHHHHHCCSEEEEEECC-------CCCCGGGSCCHHHHHHHHHHHHT
T ss_pred HHHHHhC--CCCEEEEEEEECCccHHHHHHHHHHHHHcCCCEEEEEeee-ecCCCcccccccCCCCHHHHHHHHHHHHH
Confidence 9999998 9988888877558888889999999999999998876554 32211 111 122345556666666554
No 9
>2z2u_A UPF0026 protein MJ0257; metal binding protein; 2.40A {Methanocaldococcus jannaschii}
Probab=99.66 E-value=6e-16 Score=138.14 Aligned_cols=194 Identities=18% Similarity=0.200 Sum_probs=124.7
Q ss_pred eeeeC-cccCCCCcCcccCCC-----------CCCCCChhHHHHHHHHHHH---------------------CCCcEEEE
Q psy2895 64 FMIMG-SICTRRCKFCNISHG-----------RPDPLDIEEPKKIAYTINK---------------------LKLNYVVI 110 (293)
Q Consensus 64 ~~~~t-~~C~~~C~fC~~~~~-----------~~~~~~~eei~~~~~~~~~---------------------~G~~~i~l 110 (293)
.+.+| .+||++|.||..+.. ..+.++++++++.+.+..+ ...+.|.|
T Consensus 54 ~i~~t~~~Cn~~C~fC~~~~~~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~~~~~~~g~~~v~~~~r~~~~~~~~~i~~ 133 (311)
T 2z2u_A 54 QCTPSVIWCQQNCIFCWRVLPRDIGIDISQIKEPKWEEPEVVYEKILAMHKRIIMGYAGVLDRVGEKKFKEALEPKHVAI 133 (311)
T ss_dssp EEESCSSCCSCC----------------CCSCCCCCCCHHHHHHHHHHHHHHHHHGGGGGHHHHCHHHHHHHTSCCEEEE
T ss_pred EeccChhHHhCcCcccCCCCCCcccccccccCccccCCHHHHHHHHHHHHHHHhhccCCCcCcchhhhhhhccCCCEEEE
Confidence 34457 799999999996631 1256889999877655422 12467899
Q ss_pred e-eecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeecccc-chHHHhhcCCC--C
Q psy2895 111 T-SVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIET-VPRLYKKVRPG--S 186 (293)
Q Consensus 111 ~-gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~les-s~~~~~~i~~~--~ 186 (293)
+ ||+| .+. +.+.++++.+++. ++.+.+.|+++. ++.++.| |++.+.+++++ ++++++++++. +
T Consensus 134 s~gGEP-ll~----~~l~~li~~~~~~--g~~~~l~TNG~~---~~~l~~L---~~~~v~isld~~~~~~~~~i~~~~~~ 200 (311)
T 2z2u_A 134 SLSGEP-TLY----PYLDELIKIFHKN--GFTTFVVSNGIL---TDVIEKI---EPTQLYISLDAYDLDSYRRICGGKKE 200 (311)
T ss_dssp CSSSCG-GGS----TTHHHHHHHHHHT--TCEEEEEECSCC---HHHHHHC---CCSEEEEECCCSSTTTC----CCCHH
T ss_pred eCCcCc-cch----hhHHHHHHHHHHC--CCcEEEECCCCC---HHHHHhC---CCCEEEEEeecCCHHHHHHHhCCccc
Confidence 8 7775 331 3588999999886 567888787665 4556655 78999999999 69999999876 6
Q ss_pred CHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEeecCCCCCCCcc---ccccccChhHHHH
Q psy2895 187 DYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYLMPSRLHL---PVHRYLHPKFFEK 263 (293)
Q Consensus 187 ~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~~~~~p~~~~~---a~~r~~~p~~~~~ 263 (293)
+++++++.++.+++. | .+...+++.-|.+. ++.++++++++++++.+.+.+|. |.+... .......+++..+
T Consensus 201 ~~~~v~~~i~~l~~~--g-~v~i~~~~~~g~n~-~~~~~~~~~~~~~~~~i~l~~~~-p~g~~~~~~~~~~~~~~~e~~~ 275 (311)
T 2z2u_A 201 YWESILNTLDILKEK--K-RTCIRTTLIRGYND-DILKFVELYERADVHFIELKSYM-HVGYSQKRLKKEDMLQHDEILK 275 (311)
T ss_dssp HHHHHHHHHHHHTTS--S-SEEEEEEECTTTTC-CGGGTHHHHHHHTCSEEEEEECC-------------CCCCHHHHHH
T ss_pred hHHHHHHHHHHHHhc--C-CEEEEEEEECCcch-hHHHHHHHHHHcCCCEEEEEeeE-EccccccccccccCCCHHHHHH
Confidence 899999999999988 7 65555544336666 89999999999999999987554 433211 1112345566666
Q ss_pred HHHHHHH-hcccc
Q psy2895 264 FKKIAYK-LGFKN 275 (293)
Q Consensus 264 ~~~~~~~-~G~~~ 275 (293)
+.+...+ .|+..
T Consensus 276 ~~~~l~~~~g~~~ 288 (311)
T 2z2u_A 276 LAKMLDENSSYKL 288 (311)
T ss_dssp HHHHHHTSSSEEE
T ss_pred HHHHHHHhcCceE
Confidence 6666665 67654
No 10
>3rfa_A Ribosomal RNA large subunit methyltransferase N; radical SAM, S-adenosylmethionine, iron sulfur cluster, oxidoreductase; HET: SAM; 2.05A {Escherichia coli} PDB: 3rf9_A*
Probab=99.63 E-value=1.6e-14 Score=132.47 Aligned_cols=195 Identities=12% Similarity=0.180 Sum_probs=140.3
Q ss_pred eeeCcccCCCCcCcccCCC-CCCCCChhHHHHHHHHHHH----------CCCcEEEEee-ecCCCCCCCChhHHHHHHHH
Q psy2895 65 MIMGSICTRRCKFCNISHG-RPDPLDIEEPKKIAYTINK----------LKLNYVVITS-VNRDDLHDGGSSHFVSCIKH 132 (293)
Q Consensus 65 ~~~t~~C~~~C~fC~~~~~-~~~~~~~eei~~~~~~~~~----------~G~~~i~l~g-g~~~~l~~~~~~~~~~ll~~ 132 (293)
+..+.|||.+|.||..... ..+.++++||++.+..+.. .+++.|+|+| |+| .+ ..+.+.++++.
T Consensus 119 VSsq~GCnl~C~fC~tg~~g~~r~Lt~eEIv~qv~~~~~~~~~~g~~gg~~i~~Ivf~GgGEP-Ll---n~d~v~~~i~~ 194 (404)
T 3rfa_A 119 VSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEP-LL---NLNNVVPAMEI 194 (404)
T ss_dssp CCCEEECSSCCTTCGGGTTCEEEECCHHHHHHHHHHHHHHHCCHHHHSSCSCSEEEECSSSCG-GG---CHHHHHHHHHH
T ss_pred EEeCCCCCCcCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHhhhcccccCCCccEEEEeCCCCc-cc---CHHHHHHHHHH
Confidence 3345899999999998753 3457999999998876643 2478899995 664 23 25788999999
Q ss_pred HHhhCCCc-----EEEEEcCCCcCcHHHHHHHHHHcCCCeeeecccc-chHHHhhcCC---CCCHHHHHHHHHHH-HHhC
Q psy2895 133 IRKLSTKI-----KIEILIPDFRNQINHVLKIFKQALPDVLNHNIET-VPRLYKKVRP---GSDYKHSLNLLKNF-KKLY 202 (293)
Q Consensus 133 i~~~~~~~-----~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~les-s~~~~~~i~~---~~~~e~~l~~i~~~-~~~~ 202 (293)
+++.. ++ .+.+.|+|+.. .+++|.+.+...+.+++.+ +++.++++.+ +++.+++++.++.. .+.
T Consensus 195 lk~~~-Gl~~s~r~itlsTnG~~p----~i~~L~~~~d~~LaiSLka~d~e~~~~i~pv~~~~~le~vl~ai~~~~~~~- 268 (404)
T 3rfa_A 195 MLDDF-GFGLSKRRVTLSTSGVVP----ALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKS- 268 (404)
T ss_dssp HHSTT-TTCCCGGGEEEEESCCHH----HHHHHHHHCCCEEEEECCCSSHHHHHHHSGGGGTSCHHHHHHHHHHHHHHC-
T ss_pred HHhhc-CcCcCCCceEEECCCcHH----HHHHHHHhhcceEEecccCCCHHHHHHhcCCccCCCHHHHHHHHHHHHHHh-
Confidence 98742 34 67888877652 4677777765667899999 6899999874 67899999999654 444
Q ss_pred CCc-----eeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEeecCCCCCCCccccccccChhHHHHHHHHHHHhccc
Q psy2895 203 PNI-----LTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYLMPSRLHLPVHRYLHPKFFEKFKKIAYKLGFK 274 (293)
Q Consensus 203 pgi-----~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~~~~~p~~~~~a~~r~~~p~~~~~~~~~~~~~G~~ 274 (293)
|. .+...+|-|++++++|+.+++++++.++. .+.+-+|. |.+.. -++-..++.+.++.+.+.+.|+.
T Consensus 269 -g~~~~~V~ie~vLI~GvNDs~e~~~~La~ll~~l~~-~VnLIpyn-P~~~~--~~~~ps~e~i~~f~~iL~~~Gi~ 340 (404)
T 3rfa_A 269 -NANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC-KINLIPWN-PFPGA--PYGRSSNSRIDRFSKVLMSYGFT 340 (404)
T ss_dssp -TTTTTCEEEEEEEBTTTTCSHHHHHHHHHHTTTSCE-EEEEEECC-CCTTC--CCCBCCHHHHHHHHHHHHHTTCE
T ss_pred -CCCcccEEEEEEEecCCCCCHHHHHHHHHHHHcCCC-cEEEEecc-CCCCC--CCCCCCHHHHHHHHHHHHHcCCc
Confidence 44 45555666889999999999999999875 45554443 43321 12224567788888888888875
No 11
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=99.62 E-value=3.6e-14 Score=131.49 Aligned_cols=165 Identities=12% Similarity=0.180 Sum_probs=125.7
Q ss_pred eeeeCcccCCCCcCcccCCCC--C-CCCChhHHHHHHHHHHH-CCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCC
Q psy2895 64 FMIMGSICTRRCKFCNISHGR--P-DPLDIEEPKKIAYTINK-LKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTK 139 (293)
Q Consensus 64 ~~~~t~~C~~~C~fC~~~~~~--~-~~~~~eei~~~~~~~~~-~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~ 139 (293)
.+.+|++||.+|.||...... . ..++.+++.+.++.+.+ .|++.|.|+||+|- +. ..+.+.++++.+++. ++
T Consensus 118 ~l~vT~~Cnl~C~yC~~~~~~~~~~~~ls~eei~~~i~~i~~~~gi~~V~ltGGEPl-l~--~d~~L~~il~~l~~~-~~ 193 (416)
T 2a5h_A 118 LLLITDMCSMYCRHCTRRRFAGQSDDSMPMERIDKAIDYIRNTPQVRDVLLSGGDAL-LV--SDETLEYIIAKLREI-PH 193 (416)
T ss_dssp EEEEESCCSSCCTTCTTTTTTTSSSSBCCHHHHHHHHHHHHTCTTCCEEEEEESCTT-SS--CHHHHHHHHHHHHTS-TT
T ss_pred EEecCCCccccCcCCCCcccCCCccCCCCHHHHHHHHHHHHhcCCCcEEEEECCCCC-CC--CHHHHHHHHHHHHhc-CC
Confidence 445699999999999876532 2 46899999999998887 69999999999962 21 123588899999875 33
Q ss_pred c-EEEEEcCC------CcCcHHHHHHHHHHcCCCeeeecccc-chHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeE
Q psy2895 140 I-KIEILIPD------FRNQINHVLKIFKQALPDVLNHNIET-VPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGI 211 (293)
Q Consensus 140 ~-~i~~~~~~------~~~~~~e~l~~l~~aG~~~i~~~les-s~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ 211 (293)
+ .+++.|++ .++ ++.++.|+++ +.+.+++++ .+ +.+. ++++++++.++++ |+.+....
T Consensus 194 v~~i~i~Tng~~~~p~~it--~e~l~~L~~~--~~v~Isl~~~~~---~ei~-----~~v~~ai~~L~~a--Gi~v~i~~ 259 (416)
T 2a5h_A 194 VEIVRIGSRTPVVLPQRIT--PELVNMLKKY--HPVWLNTHFNHP---NEIT-----EESTRACQLLADA--GVPLGNQS 259 (416)
T ss_dssp CCEEEEECSHHHHCGGGCC--HHHHHHHGGG--CSEEEEECCCSG---GGCC-----HHHHHHHHHHHHT--TCCEEEEE
T ss_pred ccEEEEEecccccccccCC--HHHHHHHHhc--CcEEEEEecCCH---HHHh-----HHHHHHHHHHHHc--CCEEEEEE
Confidence 3 67777654 234 7899999987 778888887 34 2332 8899999999999 99766554
Q ss_pred Ee--ecCCCHHHHHHHHHHHHhCCCCEEEeecCCCCCC
Q psy2895 212 MV--GLGENDEEILTVIHDMRNHNIDILTIGQYLMPSR 247 (293)
Q Consensus 212 iv--G~gEt~ed~~~~l~~l~~l~~~~i~i~~~~~p~~ 247 (293)
++ |++++.+++.++++++.++|++...++ ++++.+
T Consensus 260 vll~GvNd~~e~l~~l~~~l~~lgv~~~~i~-~~~~~~ 296 (416)
T 2a5h_A 260 VLLRGVNDCVHVMKELVNKLVKIRVRPYYIY-QCDLSL 296 (416)
T ss_dssp ECCTTTTCSHHHHHHHHHHHHHTTEEEEEEE-CCCCBT
T ss_pred EEECCCCCCHHHHHHHHHHHHHcCCceEEEe-ecCCCC
Confidence 44 788999999999999999999877775 555433
No 12
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.22 E-value=5.9e-10 Score=91.34 Aligned_cols=157 Identities=10% Similarity=0.091 Sum_probs=115.6
Q ss_pred cEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeecccc-chHHHhhcCC
Q psy2895 106 NYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIET-VPRLYKKVRP 184 (293)
Q Consensus 106 ~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~les-s~~~~~~i~~ 184 (293)
..|.|+||+| .+. .+.+.++++.+++. ++.+.+.|+|++. ++.++.|.+. ++.+.+++++ +++.|+++++
T Consensus 5 ~~v~~tGGEP-ll~---~~~~~~l~~~~~~~--g~~~~l~TNG~l~--~~~~~~l~~~-~d~v~isld~~~~~~~~~~~g 75 (182)
T 3can_A 5 GGVTFCGGEP-LLH---PEFLIDILKRCGQQ--GIHRAVDTTLLAR--KETVDEVMRN-CELLLIDLKSMDSTVHQTFCD 75 (182)
T ss_dssp CCEEECSSTG-GGS---HHHHHHHHHHHHHT--TCCEEEECTTCCC--HHHHHHHHHT-CSEEEEECCCSCHHHHHHHHS
T ss_pred CEEEEEcccc-cCC---HHHHHHHHHHHHHC--CCcEEEECCCCCC--HHHHHHHHhh-CCEEEEECCCCCHHHHHHHhC
Confidence 4588999996 231 33346999999886 5678888887765 7888999877 8999999999 6899999874
Q ss_pred CCCHHHHHHHHHHHHHhCCCceeeE--eEEeecCCCHHHHHHHHHHHHhC-CC-CEEEeecCCCCCCCc--------ccc
Q psy2895 185 GSDYKHSLNLLKNFKKLYPNILTKS--GIMVGLGENDEEILTVIHDMRNH-NI-DILTIGQYLMPSRLH--------LPV 252 (293)
Q Consensus 185 ~~~~e~~l~~i~~~~~~~pgi~~~~--~~ivG~gEt~ed~~~~l~~l~~l-~~-~~i~i~~~~~p~~~~--------~a~ 252 (293)
.+++.+++.++.+++. |+.+.. .++-|+.++.+++.+.+++++++ |+ ..+.+.+|. |..+. .+.
T Consensus 76 -~~~~~i~~~i~~l~~~--g~~v~i~~~v~~~~n~n~~~~~~~~~~~~~~~g~~~~~~l~~~~-p~g~~~~~~l~~~y~~ 151 (182)
T 3can_A 76 -VPNELILKNIRRVAEA--DFPYYIRIPLIEGVNADEKNIKLSAEFLASLPRHPEIINLLPYH-DIGKGKHAKLGSIYNP 151 (182)
T ss_dssp -SCSHHHHHHHHHHHHT--TCCEEEEEEECBTTTCSHHHHHHHHHHHHHSSSCCSEEEEEECC-C---------------
T ss_pred -CCHHHHHHHHHHHHhC--CCeEEEEEEEECCCCCCHHHHHHHHHHHHhCcCccceEEEecCc-ccCHHHHHHhCCcCcc
Confidence 4579999999999998 875544 44446678999999999999999 98 888887554 43321 111
Q ss_pred --ccccChhH--HHHHHHHHHHhcccc
Q psy2895 253 --HRYLHPKF--FEKFKKIAYKLGFKN 275 (293)
Q Consensus 253 --~r~~~p~~--~~~~~~~~~~~G~~~ 275 (293)
.....+++ +.++.+.+++.|+..
T Consensus 152 ~~~~~~~~e~~~l~~~~~~~~~~g~~~ 178 (182)
T 3can_A 152 KGYKMQTPSEEVQQQCIQILTDYGLKA 178 (182)
T ss_dssp ---CCBCCCHHHHHHHHHHHHHTTCCE
T ss_pred cCCCCCCHHHHHHHHHHHHHHHcCCce
Confidence 11233456 788888888888764
No 13
>4fhd_A Spore photoproduct lyase; partial TIM-barrel, DNA repair, damaged DNA; HET: EEM 0TT; 2.00A {Geobacillus thermodenitrificans} PDB: 4fhc_A* 4fhg_A* 4fhe_A* 4fhf_A*
Probab=98.47 E-value=1.5e-06 Score=78.28 Aligned_cols=159 Identities=11% Similarity=0.139 Sum_probs=97.5
Q ss_pred eeeCcccCCCCcCcccCC--CCCC----CCChhHHHHHHHH-HHHCCCc-EEEEeeecCCCCCC-CChhHHHHHHHHHHh
Q psy2895 65 MIMGSICTRRCKFCNISH--GRPD----PLDIEEPKKIAYT-INKLKLN-YVVITSVNRDDLHD-GGSSHFVSCIKHIRK 135 (293)
Q Consensus 65 ~~~t~~C~~~C~fC~~~~--~~~~----~~~~eei~~~~~~-~~~~G~~-~i~l~gg~~~~l~~-~~~~~~~~ll~~i~~ 135 (293)
+....||+++|.||+... +... ....+++++.++. +.+.+-+ ..+-.|...+.++- .......++++.+.+
T Consensus 111 ln~y~GC~~~C~YCYl~~~~~~~~~I~v~vN~~eiL~~l~~~l~~~~~~~~~i~~g~~TDpyp~E~~~~ltr~~le~l~~ 190 (368)
T 4fhd_A 111 IPLATGCMGHCHYCYLQTTLGSKPYIRVYVNLDDIFAQAQKYINERAPEITRFEAACTSDIVGIDHLTHSLKKAIEFIGA 190 (368)
T ss_dssp CCSEEBCSCCCTTCTHHHHTTTCCSEEEECCHHHHHHHHHHHHHHHTTSCEEEESCSSBCHHHHHTTTCHHHHHHHHHHH
T ss_pred eCCccCCCCCCceEeccccCCCCCeEEEecCHHHHHHHHHHHHhhcCCCceEEEEEcCCCcchhhHHHhHHHHHHHHHHh
Confidence 334599999999998653 2221 3568888887665 3333443 33334444333321 112345567777766
Q ss_pred hCCCcEEEEEc-CCCcCcHHHHHHHHHHcCCCeeeeccccchHHHhhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEe
Q psy2895 136 LSTKIKIEILI-PDFRNQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMV 213 (293)
Q Consensus 136 ~~~~~~i~~~~-~~~~~~~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~iv 213 (293)
. ++..+++.| +..++ .|..++..|.-.+.+++.+ +++.+.+-++ -+.++++++++.++++ |+++...+.-
T Consensus 191 ~-~~~~v~i~TKs~lid----~L~~l~~~~~v~V~~Sitt-~~l~r~~EP~aps~~~RL~Ai~~l~~a--Gipv~v~iaP 262 (368)
T 4fhd_A 191 T-DYGRLRFVTKYEHVD----HLLDARHNGKTRFRFSINS-RYVINHFEPGTSSFDGRLAAARKVAGA--GYKLGFVVAP 262 (368)
T ss_dssp C-SSEEEEEEESCCCCG----GGTTCCCTTCEEEEEEECC-HHHHHHHCTTSCCHHHHHHHHHHHHHT--TCEEEEEEEE
T ss_pred C-CCceEEEEeCCcCHH----HHHhcCcCCceEEEEEEcC-HHHHHHcCCCCCCHHHHHHHHHHHHHC--CCeEEEEEeC
Confidence 4 344688877 33332 2333433444445556543 7788888764 4899999999999999 9988766544
Q ss_pred ec-CCCH-HHHHHHHHHHHh
Q psy2895 214 GL-GEND-EEILTVIHDMRN 231 (293)
Q Consensus 214 G~-gEt~-ed~~~~l~~l~~ 231 (293)
=+ +++. ++..+.++.+.+
T Consensus 263 IiP~~~~~e~y~~lle~l~~ 282 (368)
T 4fhd_A 263 IYRHEGWERGYFELFQELAR 282 (368)
T ss_dssp ECCCTTHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHH
Confidence 44 5554 678888876654
No 14
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=98.06 E-value=7.5e-05 Score=65.75 Aligned_cols=145 Identities=14% Similarity=0.109 Sum_probs=103.2
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecCCC-CCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcC
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNRDD-LHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQAL 164 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~-l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG 164 (293)
..++.++.+++++.+.+.|++.|-++++..+. .+. .....++++.+++ .++..+.+..+ . .+.++...++|
T Consensus 22 ~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~--~~d~~~~~~~~~~-~~~~~~~~l~~---~--~~~i~~a~~ag 93 (298)
T 2cw6_A 22 NIVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQ--MGDHTEVLKGIQK-FPGINYPVLTP---N--LKGFEAAVAAG 93 (298)
T ss_dssp SCCCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGG--GTTHHHHHHHSCC-CTTCBCCEECC---S--HHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHcCcCEEEECCCcCcccccc--cCCHHHHHHHHhh-CCCCEEEEEcC---C--HHhHHHHHHCC
Confidence 35899999999999999999998777654321 111 1233456666655 34544444432 2 56688888999
Q ss_pred CCeeeeccccchH-HHhhcCCC--CCHHHHHHHHHHHHHhCCCceeeEeEEeec------CCCHHHHHHHHHHHHhCCCC
Q psy2895 165 PDVLNHNIETVPR-LYKKVRPG--SDYKHSLNLLKNFKKLYPNILTKSGIMVGL------GENDEEILTVIHDMRNHNID 235 (293)
Q Consensus 165 ~~~i~~~less~~-~~~~i~~~--~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~------gEt~ed~~~~l~~l~~l~~~ 235 (293)
++.+.+..-+++. ..+.++++ ..++...+.++.+++. |+.+..+++..+ .-+.+.+.+.++.+.++|++
T Consensus 94 ~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~--G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~ 171 (298)
T 2cw6_A 94 AKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSA--NISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCY 171 (298)
T ss_dssp CSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHT--TCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCS
T ss_pred CCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC--CCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCC
Confidence 9999986655543 33445543 3667788888999999 999887777544 23789999999999999999
Q ss_pred EEEee
Q psy2895 236 ILTIG 240 (293)
Q Consensus 236 ~i~i~ 240 (293)
.+.+.
T Consensus 172 ~i~l~ 176 (298)
T 2cw6_A 172 EISLG 176 (298)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 98885
No 15
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=97.83 E-value=0.00027 Score=61.98 Aligned_cols=145 Identities=10% Similarity=0.082 Sum_probs=100.1
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCC
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPD 166 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~ 166 (293)
.++.++.+++++.+.+.|+..|-+++...+.+.. ......++++.+++. +++.+.+..+ + .+.+++..++|++
T Consensus 22 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p-~~~~~~e~~~~i~~~-~~~~v~~l~~---n--~~~i~~a~~~G~~ 94 (295)
T 1ydn_A 22 FVPTADKIALINRLSDCGYARIEATSFVSPKWVP-QLADSREVMAGIRRA-DGVRYSVLVP---N--MKGYEAAAAAHAD 94 (295)
T ss_dssp CCCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCG-GGTTHHHHHHHSCCC-SSSEEEEECS---S--HHHHHHHHHTTCS
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEccCcCccccc-cccCHHHHHHHHHhC-CCCEEEEEeC---C--HHHHHHHHHCCCC
Confidence 5899999999999999999998776533221100 012445777777664 5566655542 2 5678888899999
Q ss_pred eeeeccccchHHHh-hcCCC--CCHHHHHHHHHHHHHhCCCceeeEeEE--eec----CCCHHHHHHHHHHHHhCCCCEE
Q psy2895 167 VLNHNIETVPRLYK-KVRPG--SDYKHSLNLLKNFKKLYPNILTKSGIM--VGL----GENDEEILTVIHDMRNHNIDIL 237 (293)
Q Consensus 167 ~i~~~less~~~~~-~i~~~--~~~e~~l~~i~~~~~~~pgi~~~~~~i--vG~----gEt~ed~~~~l~~l~~l~~~~i 237 (293)
.+.+..-+|+...+ +++++ .+.+...+.++.+++. |+.+...+. +|- .-+++++.+.++.+.+.|++.+
T Consensus 95 ~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~--G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i 172 (295)
T 1ydn_A 95 EIAVFISASEGFSKANINCTIAESIERLSPVIGAAIND--GLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEV 172 (295)
T ss_dssp EEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHT--TCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEE
T ss_pred EEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHc--CCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEE
Confidence 99886544543332 23322 2455566778999999 998875554 332 3478899999999999999998
Q ss_pred Eee
Q psy2895 238 TIG 240 (293)
Q Consensus 238 ~i~ 240 (293)
.+.
T Consensus 173 ~l~ 175 (295)
T 1ydn_A 173 SLG 175 (295)
T ss_dssp EEE
T ss_pred Eec
Confidence 885
No 16
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=97.73 E-value=0.00093 Score=58.94 Aligned_cols=145 Identities=14% Similarity=0.155 Sum_probs=100.8
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecCCC-CCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcC
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNRDD-LHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQAL 164 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~-l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG 164 (293)
..++.++.+++++.+.+.|++.|-+++...|. .+. .....++++.+.+. ++..+....+ . .+-++...++|
T Consensus 23 ~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~--~~d~~~~~~~~~~~-~~~~~~~l~~---~--~~~i~~a~~~g 94 (307)
T 1ydo_A 23 VWIATEDKITWINQLSRTGLSYIEITSFVHPKWIPA--LRDAIDVAKGIDRE-KGVTYAALVP---N--QRGLENALEGG 94 (307)
T ss_dssp SCCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGG--GTTHHHHHHHSCCC-TTCEEEEECC---S--HHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECCCcCcccccc--cCCHHHHHHHhhhc-CCCeEEEEeC---C--HHhHHHHHhCC
Confidence 35899999999999999999998876654321 111 12333556666554 5666666553 2 45678888899
Q ss_pred CCeeeeccccchHH-HhhcCCC--CCHHHHHHHHHHHHHhCCCceeeEeEEeecC------CCHHHHHHHHHHHHhCCCC
Q psy2895 165 PDVLNHNIETVPRL-YKKVRPG--SDYKHSLNLLKNFKKLYPNILTKSGIMVGLG------ENDEEILTVIHDMRNHNID 235 (293)
Q Consensus 165 ~~~i~~~less~~~-~~~i~~~--~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~g------Et~ed~~~~l~~l~~l~~~ 235 (293)
++.+.+..-+|+-. .+.+++. ...+...+.++.+++. |+.+...+..-++ -+++.+.+.++.+.+.|++
T Consensus 95 ~~~v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~--G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~ 172 (307)
T 1ydo_A 95 INEACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKA--NLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGIS 172 (307)
T ss_dssp CSEEEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHT--TCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCS
T ss_pred cCEEEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC--CCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCC
Confidence 99998876445432 2334432 1345667788889999 9988777766542 4688999999999999999
Q ss_pred EEEee
Q psy2895 236 ILTIG 240 (293)
Q Consensus 236 ~i~i~ 240 (293)
.+.+.
T Consensus 173 ~i~l~ 177 (307)
T 1ydo_A 173 ELSLG 177 (307)
T ss_dssp CEEEE
T ss_pred EEEEc
Confidence 88774
No 17
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=97.68 E-value=0.0021 Score=56.51 Aligned_cols=145 Identities=10% Similarity=0.159 Sum_probs=99.6
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecCC-CCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcC
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNRD-DLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQAL 164 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~-~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG 164 (293)
..++.|+.+++++.+.+.|+..|-.++...+ ..+. .....++++.+.+. ++..+.+..+ + .+.+++..++|
T Consensus 25 ~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~--~~d~~~~~~~~~~~-~~~~~~~l~~---~--~~~i~~a~~aG 96 (302)
T 2ftp_A 25 QPIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQ--MAGSAEVFAGIRQR-PGVTYAALAP---N--LKGFEAALESG 96 (302)
T ss_dssp SCCCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGG--GTTHHHHHHHSCCC-TTSEEEEECC---S--HHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHcCcCEEEECCCcCcccccc--ccCHHHHHHHhhhc-CCCEEEEEeC---C--HHHHHHHHhCC
Confidence 3589999999999999999999877654322 1221 12344566666543 4556665543 2 56788888899
Q ss_pred CCeeeeccccchH-HHhhcCCC--CCHHHHHHHHHHHHHhCCCceeeEeEEeecC------CCHHHHHHHHHHHHhCCCC
Q psy2895 165 PDVLNHNIETVPR-LYKKVRPG--SDYKHSLNLLKNFKKLYPNILTKSGIMVGLG------ENDEEILTVIHDMRNHNID 235 (293)
Q Consensus 165 ~~~i~~~less~~-~~~~i~~~--~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~g------Et~ed~~~~l~~l~~l~~~ 235 (293)
++.+.+..-+|+- ..+.++.+ .+.+...+.++.+++. |+.+...+..-++ -+++++.+.++.+.+.|++
T Consensus 97 ~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~--G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d 174 (302)
T 2ftp_A 97 VKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQH--QVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCY 174 (302)
T ss_dssp CCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHT--TCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCS
T ss_pred cCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC--CCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCC
Confidence 9999876544442 23345432 2556677778889999 9988766554332 3678888999999999999
Q ss_pred EEEee
Q psy2895 236 ILTIG 240 (293)
Q Consensus 236 ~i~i~ 240 (293)
.+.+.
T Consensus 175 ~i~l~ 179 (302)
T 2ftp_A 175 EVSLG 179 (302)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 98874
No 18
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=97.60 E-value=0.0017 Score=56.85 Aligned_cols=146 Identities=12% Similarity=0.122 Sum_probs=94.2
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCC
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALP 165 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~ 165 (293)
..++.++.+++++.+.+.|++.|-+++.. .. ...+ +.++.+.+..++..+..+.+....+++..++.++++|+
T Consensus 22 ~~~~~~~K~~i~~~L~~~Gv~~IE~g~p~---~~---~~d~-e~v~~i~~~~~~~~i~~l~~~~~~di~~a~~~~~~ag~ 94 (293)
T 3ewb_X 22 VNFDVKEKIQIALQLEKLGIDVIEAGFPI---SS---PGDF-ECVKAIAKAIKHCSVTGLARCVEGDIDRAEEALKDAVS 94 (293)
T ss_dssp -CCCHHHHHHHHHHHHHHTCSEEEEECGG---GC---HHHH-HHHHHHHHHCCSSEEEEEEESSHHHHHHHHHHHTTCSS
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCC---CC---ccHH-HHHHHHHHhcCCCEEEEEecCCHHHHHHHHHHHhhcCC
Confidence 35899999999999999999988765421 11 2222 33555655556667766654221112345555666899
Q ss_pred CeeeeccccchHH-HhhcCCC--CCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 166 DVLNHNIETVPRL-YKKVRPG--SDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 166 ~~i~~~less~~~-~~~i~~~--~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
+.+++..-+|+-. ...++.. ...+...+.++.+++. |+.+..+...+..-+++.+.+.++.+.+.|++.+.+.
T Consensus 95 ~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~--g~~v~~~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~ 170 (293)
T 3ewb_X 95 PQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQK--FDVVQFSPEDATRSDRAFLIEAVQTAIDAGATVINIP 170 (293)
T ss_dssp EEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTT--CSCEEEEEETGGGSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhC--CCEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEEec
Confidence 9988766455432 2234322 1344456666777888 8876655443334677888999999999999998774
No 19
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=97.52 E-value=0.0017 Score=58.19 Aligned_cols=138 Identities=15% Similarity=0.125 Sum_probs=88.3
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEe-----eecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEE-cCCCcCcHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVIT-----SVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEIL-IPDFRNQINHVLKI 159 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~-----gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~-~~~~~~~~~e~l~~ 159 (293)
..++.++.+++++.+.+.|++.|-++ ++..+.. ......-.+.++.+++..++..+.++ .|+... .+.++.
T Consensus 25 ~~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~-g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~--~~~i~~ 101 (345)
T 1nvm_A 25 HQYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNY-GFGRHTDLEYIEAVAGEISHAQIATLLLPGIGS--VHDLKN 101 (345)
T ss_dssp TCCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTT-BCCSSCHHHHHHHHHTTCSSSEEEEEECBTTBC--HHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcc-cCCCCCHHHHHHHHHhhCCCCEEEEEecCCccc--HHHHHH
Confidence 35899999999999999999998774 2211111 00112244677778776677777776 454333 667888
Q ss_pred HHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEe
Q psy2895 160 FKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTI 239 (293)
Q Consensus 160 l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i 239 (293)
..++|++.+.+..-.++ .+...+.++.+++. |+.+...+.-...-+++.+.+.++.+.+.|++.+.+
T Consensus 102 a~~aGvd~v~I~~~~s~-----------~~~~~~~i~~ak~~--G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l 168 (345)
T 1nvm_A 102 AYQAGARVVRVATHCTE-----------ADVSKQHIEYARNL--GMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYM 168 (345)
T ss_dssp HHHHTCCEEEEEEETTC-----------GGGGHHHHHHHHHH--TCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHhCCcCEEEEEEeccH-----------HHHHHHHHHHHHHC--CCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 88999999887532121 13345556666666 766554443344555666777777777777776655
No 20
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=97.31 E-value=0.0037 Score=55.47 Aligned_cols=145 Identities=15% Similarity=0.105 Sum_probs=94.8
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCC
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPD 166 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~ 166 (293)
.++.++.+++++.+.+.|++.|-++ .+ ... ...+ +.++.+.+..++..+..+.+.....++..++.++.+|++
T Consensus 24 ~~~~~~Kl~ia~~L~~~Gv~~IE~g--~p-~~~---~~d~-e~v~~i~~~~~~~~i~~l~r~~~~~i~~a~~al~~ag~~ 96 (325)
T 3eeg_A 24 QLNTEEKIIVAKALDELGVDVIEAG--FP-VSS---PGDF-NSVVEITKAVTRPTICALTRAKEADINIAGEALRFAKRS 96 (325)
T ss_dssp -CCTTHHHHHHHHHHHHTCSEEEEE--CT-TSC---HHHH-HHHHHHHHHCCSSEEEEECCSCHHHHHHHHHHHTTCSSE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEe--CC-CCC---HhHH-HHHHHHHHhCCCCEEEEeecCCHHHHHHHHHhhcccCCC
Confidence 5899999999999999999987654 22 121 2333 344666666666677766531111123345555556999
Q ss_pred eeeeccccchHH-HhhcC--CCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 167 VLNHNIETVPRL-YKKVR--PGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 167 ~i~~~less~~~-~~~i~--~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
.+.+..-+|+-. .+.++ +....+...+.++.+++. |+.+..+...+..-+++.+.+.++.+.+.|++.+.+.
T Consensus 97 ~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~--g~~v~f~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l~ 171 (325)
T 3eeg_A 97 RIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKV--VHEVEFFCEDAGRADQAFLARMVEAVIEAGADVVNIP 171 (325)
T ss_dssp EEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTT--SSEEEEEEETGGGSCHHHHHHHHHHHHHHTCSEEECC
T ss_pred EEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHC--CCEEEEEccccccchHHHHHHHHHHHHhcCCCEEEec
Confidence 998765455432 23344 344677888899999999 9877655554445677788899999999999987763
No 21
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=97.21 E-value=0.0069 Score=54.03 Aligned_cols=144 Identities=15% Similarity=0.186 Sum_probs=95.6
Q ss_pred CCChhHHHHHHH-HHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHh--hCCCcEEEEEcCCCcCcHHHHHHHHHHc
Q psy2895 87 PLDIEEPKKIAY-TINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRK--LSTKIKIEILIPDFRNQINHVLKIFKQA 163 (293)
Q Consensus 87 ~~~~eei~~~~~-~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~--~~~~~~i~~~~~~~~~~~~e~l~~l~~a 163 (293)
.++.++.+++++ .+.+.|++.|-+.++-. ...+++.+.++.+.... ..++..+..+.+. . + -++...++
T Consensus 37 ~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~---~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~~--~--~-~i~~a~~~ 108 (337)
T 3ble_A 37 SFSTSEKLNIAKFLLQKLNVDRVEIASARV---SKGELETVQKIMEWAATEQLTERIEILGFVDG--N--K-TVDWIKDS 108 (337)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSEEEEEETTS---CTTHHHHHHHHHHHHHHTTCGGGEEEEEESST--T--H-HHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHcCCCEEEEeCCCC---ChhHHHHHHHHHhhhhhhccCCCCeEEEEccc--h--h-hHHHHHHC
Confidence 589999999999 99999999987655432 11123344433332110 2344455555442 1 2 57777789
Q ss_pred CCCeeeeccccchH-HHhhcCCC--CCHHHHHHHHHHHHHhCCCceeeEeEEe---ecCCCHHHHHHHHHHHHhCCCCEE
Q psy2895 164 LPDVLNHNIETVPR-LYKKVRPG--SDYKHSLNLLKNFKKLYPNILTKSGIMV---GLGENDEEILTVIHDMRNHNIDIL 237 (293)
Q Consensus 164 G~~~i~~~less~~-~~~~i~~~--~~~e~~l~~i~~~~~~~pgi~~~~~~iv---G~gEt~ed~~~~l~~l~~l~~~~i 237 (293)
|++.+.+..-+|+. ..+.++.. ...+...+.++.+++. |+.+..++.- +..-+.+.+.+.++.+.+.|++.+
T Consensus 109 g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~--G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i 186 (337)
T 3ble_A 109 GAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKS--GLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEHIERI 186 (337)
T ss_dssp TCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHT--TCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSCCSEE
T ss_pred CCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHC--CCEEEEEEEECCCCCcCCHHHHHHHHHHHHHcCCCEE
Confidence 99999987655543 33445532 2456677778888999 9987766554 334467888999999999999998
Q ss_pred Eee
Q psy2895 238 TIG 240 (293)
Q Consensus 238 ~i~ 240 (293)
.+.
T Consensus 187 ~l~ 189 (337)
T 3ble_A 187 FLP 189 (337)
T ss_dssp EEE
T ss_pred EEe
Confidence 874
No 22
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=97.15 E-value=0.012 Score=53.96 Aligned_cols=142 Identities=18% Similarity=0.135 Sum_probs=94.0
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCC
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALP 165 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~ 165 (293)
..++.++-+++++.|.+.|++.|-++. | .. .+.-.+.++.+.+......+-... ..+ .+-++...++|+
T Consensus 56 ~~~s~eeKl~Ia~~L~~~Gv~~IEvG~--P-~a----sp~d~~~~~~i~~~~~~~~v~~~~---r~~-~~di~~A~~aG~ 124 (423)
T 3ivs_A 56 AFFDTEKKIQIAKALDNFGVDYIELTS--P-VA----SEQSRQDCEAICKLGLKCKILTHI---RCH-MDDARVAVETGV 124 (423)
T ss_dssp CCCCHHHHHHHHHHHHHHTCSEEEECC--T-TS----CHHHHHHHHHHHTSCCSSEEEEEE---ESC-HHHHHHHHHTTC
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEEee--c-cc----CHHHHHHHHHHHhcCCCCEEEEee---ccC-hhhHHHHHHcCC
Confidence 358999999999999999999986642 2 12 123345566666643332332211 111 344677778999
Q ss_pred CeeeeccccchHHHh-hcCC--CCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 166 DVLNHNIETVPRLYK-KVRP--GSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 166 ~~i~~~less~~~~~-~i~~--~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
+.+++.+-+|+-..+ .++. ....+...+.++.+++. |+.+..+..-++.-+++.+.+.++.+.+.|++.+.+.
T Consensus 125 ~~V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~--G~~V~~~~eda~r~d~~~~~~v~~~~~~~Ga~~i~l~ 200 (423)
T 3ivs_A 125 DGVDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSK--GIEVRFSSEDSFRSDLVDLLSLYKAVDKIGVNRVGIA 200 (423)
T ss_dssp SEEEEEEEC-------------CHHHHHHHHHHHHHHTT--TCEEEEEEESGGGSCHHHHHHHHHHHHHHCCSEEEEE
T ss_pred CEEEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHC--CCEEEEEEccCcCCCHHHHHHHHHHHHHhCCCccccC
Confidence 999987655643322 1222 22356777789999999 9988777666667788999999999999999988774
No 23
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=97.10 E-value=0.0091 Score=53.90 Aligned_cols=145 Identities=14% Similarity=0.100 Sum_probs=91.5
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCC
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPD 166 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~ 166 (293)
.++.++-+++++.+.+.|++.|-.+. + ... ...+ +.++.+.+..++..+..+......+++..++.++.+|++
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~--p-~~~---~~d~-e~v~~i~~~~~~~~i~~l~r~~~~di~~a~~al~~ag~~ 102 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVDIIEAGF--A-AAS---PGDF-EAVNAIAKTITKSTVCSLSRAIERDIRQAGEAVAPAPKK 102 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEE--G-GGC---HHHH-HHHHHHHTTCSSSEEEEEEESSHHHHHHHHHHHTTSSSE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeC--C-CCC---HHHH-HHHHHHHHhCCCCeEEEEecCCHHHHHHHHHHHhhCCCC
Confidence 58999999999999999999876543 2 121 2233 334555555556666655421111124455566669999
Q ss_pred eeeeccccchHH-HhhcCCC--CCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 167 VLNHNIETVPRL-YKKVRPG--SDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 167 ~i~~~less~~~-~~~i~~~--~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
.+++..-+|+-. ..+++.. ...+...+.++.++++ |..+..+...+..-+++.+.+.++.+.+.|.+.+.+.
T Consensus 103 ~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~--g~~v~~~~ed~~r~~~~~~~~~~~~~~~~Ga~~i~l~ 177 (370)
T 3rmj_A 103 RIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREY--TDDVEFSCEDALRSEIDFLAEICGAVIEAGATTINIP 177 (370)
T ss_dssp EEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTT--CSCEEEEEETGGGSCHHHHHHHHHHHHHHTCCEEEEE
T ss_pred EEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHc--CCEEEEecCCCCccCHHHHHHHHHHHHHcCCCEEEec
Confidence 998876555433 2334422 1334444556677777 7765544444445677888899999999999988774
No 24
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=96.95 E-value=0.035 Score=50.27 Aligned_cols=139 Identities=12% Similarity=0.160 Sum_probs=93.8
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCC
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALP 165 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~ 165 (293)
..++.++.+++++.+.+.|++.|-+++ + .. .+...+.++.+++..+...+-...-. . .+-++...++|+
T Consensus 20 ~~~~~~~k~~ia~~L~~~Gv~~IE~g~--p-~~----~~~~~~~~~~i~~~~~~~~v~~~~r~--~--~~di~~a~~~g~ 88 (382)
T 2ztj_A 20 ANFSTQDKVEIAKALDEFGIEYIEVTT--P-VA----SPQSRKDAEVLASLGLKAKVVTHIQC--R--LDAAKVAVETGV 88 (382)
T ss_dssp CCCCHHHHHHHHHHHHHHTCSEEEECC--T-TS----CHHHHHHHHHHHTSCCSSEEEEEEES--C--HHHHHHHHHTTC
T ss_pred CCcCHHHHHHHHHHHHHcCcCEEEEcC--C-cC----CHHHHHHHHHHHhcCCCcEEEEEccc--C--hhhHHHHHHcCC
Confidence 358999999999999999999887643 2 11 23455777888776544433332211 1 344778888999
Q ss_pred CeeeeccccchHHHhhcCCCCCH----HHHHHHHHHHHHhCCC--ceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEe
Q psy2895 166 DVLNHNIETVPRLYKKVRPGSDY----KHSLNLLKNFKKLYPN--ILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTI 239 (293)
Q Consensus 166 ~~i~~~less~~~~~~i~~~~~~----e~~l~~i~~~~~~~pg--i~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i 239 (293)
+.+++..-+|+-.. + .-+.+. +...+.++.+++. | +.+..++.-+..-+.+.+.+.++.+.+. ++.+.+
T Consensus 89 ~~v~i~~~~s~~~~-~-~~~~s~~e~l~~~~~~v~~ak~~--g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~-a~~i~l 163 (382)
T 2ztj_A 89 QGIDLLFGTSKYLR-A-PHGRDIPRIIEEAKEVIAYIREA--APHVEVRFSAEDTFRSEEQDLLAVYEAVAPY-VDRVGL 163 (382)
T ss_dssp SEEEEEECC----------CCCHHHHHHHHHHHHHHHHHH--CTTSEEEEEETTTTTSCHHHHHHHHHHHGGG-CSEEEE
T ss_pred CEEEEEeccCHHHH-H-HhCCCHHHHHHHHHHHHHHHHHc--CCCEEEEEEEEeCCCCCHHHHHHHHHHHHHh-cCEEEe
Confidence 99988654454333 3 323344 5577788889999 8 8777666655577788999999999999 998877
Q ss_pred e
Q psy2895 240 G 240 (293)
Q Consensus 240 ~ 240 (293)
.
T Consensus 164 ~ 164 (382)
T 2ztj_A 164 A 164 (382)
T ss_dssp E
T ss_pred c
Confidence 4
No 25
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=96.72 E-value=0.019 Score=54.22 Aligned_cols=137 Identities=12% Similarity=0.114 Sum_probs=93.6
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecC-----CCCCCCChhHHHHHHHHHHhhCCCcEEEEEc--C---CCcC---c-
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNR-----DDLHDGGSSHFVSCIKHIRKLSTKIKIEILI--P---DFRN---Q- 152 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~-----~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~--~---~~~~---~- 152 (293)
.++.++.+++++.+.+.|+..|-+.++.. ..+.. .=.+.++.+++..|+..+.++. + |+.. +
T Consensus 43 ~~~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~----d~~e~lr~l~~~~~~~~l~~L~R~~N~~G~~~ypddv 118 (539)
T 1rqb_A 43 RMAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFLNE----DPWERLRTFRKLMPNSRLQMLLRGQNLLGYRHYNDEV 118 (539)
T ss_dssp CCCGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCC----CHHHHHHHHHHHCTTSCEEEEECGGGTTSSSCCCHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcccccccchhccCC----CHHHHHHHHHHhCCCCEEEEEeccccccCcccCcccc
Confidence 48899999999999999999987776431 00111 1234556666655666676654 1 3211 1
Q ss_pred HHHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeE--EeecCCCHHHHHHHHHHHH
Q psy2895 153 INHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGI--MVGLGENDEEILTVIHDMR 230 (293)
Q Consensus 153 ~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~--ivG~gEt~ed~~~~l~~l~ 230 (293)
.+..++...++|++.+.+-.-+++ .+.+.+.++.+++. |..+...+ ..|..-+.+.+.+.++.+.
T Consensus 119 ~~~~ve~a~~aGvd~vrIf~s~sd-----------~~ni~~~i~~ak~~--G~~v~~~i~~~~~~~~~~e~~~~~a~~l~ 185 (539)
T 1rqb_A 119 VDRFVDKSAENGMDVFRVFDAMND-----------PRNMAHAMAAVKKA--GKHAQGTICYTISPVHTVEGYVKLAGQLL 185 (539)
T ss_dssp HHHHHHHHHHTTCCEEEECCTTCC-----------THHHHHHHHHHHHT--TCEEEEEEECCCSTTCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHhCCCCEEEEEEehhH-----------HHHHHHHHHHHHHC--CCeEEEEEEeeeCCCCCHHHHHHHHHHHH
Confidence 256788888999999887532222 24567888889998 88765444 4444568888999999999
Q ss_pred hCCCCEEEee
Q psy2895 231 NHNIDILTIG 240 (293)
Q Consensus 231 ~l~~~~i~i~ 240 (293)
+.|++.|.+.
T Consensus 186 ~~Gad~I~L~ 195 (539)
T 1rqb_A 186 DMGADSIALK 195 (539)
T ss_dssp HTTCSEEEEE
T ss_pred HcCCCEEEeC
Confidence 9999988774
No 26
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=96.55 E-value=0.03 Score=52.02 Aligned_cols=137 Identities=11% Similarity=0.137 Sum_probs=92.9
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecC-----CCCCCCChhHHHHHHHHHHhhCCCcEEEEEc--C---CCcC---c-
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNR-----DDLHDGGSSHFVSCIKHIRKLSTKIKIEILI--P---DFRN---Q- 152 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~-----~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~--~---~~~~---~- 152 (293)
.++.++.+++++.+.+.|+..|-..++.. ..+.. .-.+.++.+++..|+..+.+++ + |+.. +
T Consensus 26 ~~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~----d~~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~ddv 101 (464)
T 2nx9_A 26 RLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGE----DPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDV 101 (464)
T ss_dssp CCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCC----CHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccCC----CHHHHHHHHHHhCCCCeEEEEeccccccCcccccchh
Confidence 47899999999999999999987766431 00111 1234556666655666666654 2 3211 1
Q ss_pred HHHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeE--EeecCCCHHHHHHHHHHHH
Q psy2895 153 INHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGI--MVGLGENDEEILTVIHDMR 230 (293)
Q Consensus 153 ~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~--ivG~gEt~ed~~~~l~~l~ 230 (293)
++..++...++|++.+.+-.-.++ .+...+.++.+++. |..+...+ ..|..-+.+.+.+.++.+.
T Consensus 102 ~~~~v~~a~~~Gvd~i~if~~~sd-----------~~ni~~~i~~ak~~--G~~v~~~i~~~~~~~~~~e~~~~~a~~l~ 168 (464)
T 2nx9_A 102 VDTFVERAVKNGMDVFRVFDAMND-----------VRNMQQALQAVKKM--GAHAQGTLCYTTSPVHNLQTWVDVAQQLA 168 (464)
T ss_dssp HHHHHHHHHHTTCCEEEECCTTCC-----------THHHHHHHHHHHHT--TCEEEEEEECCCCTTCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHhCCcCEEEEEEecCH-----------HHHHHHHHHHHHHC--CCEEEEEEEeeeCCCCCHHHHHHHHHHHH
Confidence 145678888899999887532222 24567888899998 98775544 3344568888999999999
Q ss_pred hCCCCEEEee
Q psy2895 231 NHNIDILTIG 240 (293)
Q Consensus 231 ~l~~~~i~i~ 240 (293)
+.|++.+.+.
T Consensus 169 ~~Gad~I~l~ 178 (464)
T 2nx9_A 169 ELGVDSIALK 178 (464)
T ss_dssp HTTCSEEEEE
T ss_pred HCCCCEEEEc
Confidence 9999988774
No 27
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=95.97 E-value=0.33 Score=41.92 Aligned_cols=138 Identities=12% Similarity=0.101 Sum_probs=85.3
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeec-CCC---C-CCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVN-RDD---L-HDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIF 160 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~-~~~---l-~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l 160 (293)
+..+.+.+++.++++.+.|+.-|-+.|.. .|. . ...+.+++..+++.+++. ++.|.+-| .. .+.++.-
T Consensus 24 ~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~--~~piSIDT---~~--~~va~aA 96 (280)
T 1eye_A 24 CYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ--GITVSIDT---MR--ADVARAA 96 (280)
T ss_dssp CCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT--TCCEEEEC---SC--HHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC--CCEEEEeC---CC--HHHHHHH
Confidence 45789999999999999999988877622 111 1 123467788888888764 44565533 22 5566665
Q ss_pred HHcCCCeee-ecccc-chHHHhh----------cC-CC-----------C-C-----HHHHHHHHHHHHHhCCCce---e
Q psy2895 161 KQALPDVLN-HNIET-VPRLYKK----------VR-PG-----------S-D-----YKHSLNLLKNFKKLYPNIL---T 207 (293)
Q Consensus 161 ~~aG~~~i~-~~les-s~~~~~~----------i~-~~-----------~-~-----~e~~l~~i~~~~~~~pgi~---~ 207 (293)
-++|.+.++ ++... .+++++. |+ ++ + + .+...+.++.+.++ |+. +
T Consensus 97 l~aGa~iINdvsg~~~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~~~--Gi~~~~I 174 (280)
T 1eye_A 97 LQNGAQMVNDVSGGRADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAA--GVDPARL 174 (280)
T ss_dssp HHTTCCEEEETTTTSSCTTHHHHHHHHTCCEEEECCCCSCTTCTTSCCCCSSHHHHHHHHHHHHHHHHHHT--TCCGGGE
T ss_pred HHcCCCEEEECCCCCCCHHHHHHHHHhCCeEEEEcCCCCCcchhhcCcchhHHHHHHHHHHHHHHHHHHHc--CCChhhE
Confidence 567777764 33221 2333322 11 11 1 1 44455778888888 995 6
Q ss_pred eEeEEeecCCCHHHHHHHHHHHHhC
Q psy2895 208 KSGIMVGLGENDEEILTVIHDMRNH 232 (293)
Q Consensus 208 ~~~~ivG~gEt~ed~~~~l~~l~~l 232 (293)
-.+=-+||+.|.++=.++++.+.++
T Consensus 175 ilDPg~Gf~k~~~~n~~ll~~l~~~ 199 (280)
T 1eye_A 175 VLDPGLGFAKTAQHNWAILHALPEL 199 (280)
T ss_dssp EEECCTTSSCCHHHHHHHHHTHHHH
T ss_pred EEECCCCcccCHHHHHHHHHHHHHh
Confidence 6776678888888877777766554
No 28
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=95.81 E-value=0.18 Score=43.56 Aligned_cols=86 Identities=19% Similarity=0.186 Sum_probs=60.9
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCC-cCcHHHHHHHHHHcCC
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDF-RNQINHVLKIFKQALP 165 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~-~~~~~e~l~~l~~aG~ 165 (293)
.++++||.+.+.++.+.|+.-+++-.=+.+.-+..+.+.|.++++.|++..|++-|.+.|.+. ....++.+.-+ +...
T Consensus 30 PvTpeEia~~A~~a~~AGAaivHlHvRd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTg~~~~~~~eeR~~~~-~~~P 108 (282)
T 2y7e_A 30 PITPEEQAKEAKACFEAGARVIHLHIREDDGRPSQRLDRFQEAISAIREVVPEIIIQISTGGAVGESFDKRLAPL-ALKP 108 (282)
T ss_dssp CCSHHHHHHHHHHHHHHTEEEEEECEECTTSCEECCHHHHHHHHHHHHHHCTTSEEEECSSCSTTCCHHHHHGGG-GGCC
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCHHHHHHHh-hcCC
Confidence 488999999999999999998877654421112235789999999999988888888877422 11225566666 5667
Q ss_pred Ceeeeccc
Q psy2895 166 DVLNHNIE 173 (293)
Q Consensus 166 ~~i~~~le 173 (293)
+..++++-
T Consensus 109 e~asl~~g 116 (282)
T 2y7e_A 109 EMATLNAG 116 (282)
T ss_dssp SEEEEECC
T ss_pred CEEEeccc
Confidence 77765543
No 29
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=95.44 E-value=0.099 Score=45.22 Aligned_cols=85 Identities=8% Similarity=0.070 Sum_probs=60.0
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCC
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPD 166 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~ 166 (293)
.++++||.+.+.++.+.|+.-+++-.=+++.-+..+.+.|.++++.|++..|++-|.+.|.+-....++.+.-+ +...+
T Consensus 30 PvTpeEia~~A~~~~~AGAaivHlH~Rd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTgg~~~~~eeR~~~~-~~~Pe 108 (284)
T 3chv_A 30 PITVSEQVESTQEAFEAGAAIAHCHVRNDDGTPSSDPDRFARLTEGLHTHCPGMIVQFSTGGRSGAGQARGGML-PLKPD 108 (284)
T ss_dssp CCSHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCTTTCCGGGGGTTG-GGCCS
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEeeecCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCCCCCCCHHHHHHhh-hcCCC
Confidence 48899999999999999999888866553211234578999999999998888878887642111114455555 45667
Q ss_pred eeeecc
Q psy2895 167 VLNHNI 172 (293)
Q Consensus 167 ~i~~~l 172 (293)
..+++.
T Consensus 109 ~aSl~~ 114 (284)
T 3chv_A 109 MASLSV 114 (284)
T ss_dssp EEEECC
T ss_pred EEEecC
Confidence 766655
No 30
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=95.17 E-value=0.12 Score=44.44 Aligned_cols=61 Identities=15% Similarity=0.211 Sum_probs=48.3
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcC
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIP 147 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~ 147 (293)
.++++||.+.+.++.+.|+.-+++-.=+++.-+..+.+.|.++++.|++..|++-|.+++.
T Consensus 26 PvTpeEia~~A~~~~~AGAaivHlHvRd~~G~~s~d~~~~~e~~~~IR~~~pd~ii~~Ttg 86 (275)
T 3no5_A 26 PITVSEQVESTQAAFEAGATLVHLHVRNDDETPTSNPDRFALVLEGIRKHAPGMITQVSTG 86 (275)
T ss_dssp CCSHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCC
T ss_pred CCCHHHHHHHHHHHHHccCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCC
Confidence 4889999999999999999988886554321122357899999999999888887777664
No 31
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=94.96 E-value=1.1 Score=38.43 Aligned_cols=135 Identities=11% Similarity=0.071 Sum_probs=89.7
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHc--C
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQA--L 164 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~a--G 164 (293)
..+.+.+++.++++.+.|+.-|-+.|+.. ...+.+++..+++.+++.. ++.+.+=| .. .+.++.--++ |
T Consensus 30 ~~~~~~a~~~a~~~v~~GAdiIDIg~~s~---~~eE~~rv~~vi~~l~~~~-~~pisIDT---~~--~~v~~aal~a~~G 100 (271)
T 2yci_X 30 NKDPRPIQEWARRQAEKGAHYLDVNTGPT---ADDPVRVMEWLVKTIQEVV-DLPCCLDS---TN--PDAIEAGLKVHRG 100 (271)
T ss_dssp TTCCHHHHHHHHHHHHTTCSEEEEECCSC---SSCHHHHHHHHHHHHHHHC-CCCEEEEC---SC--HHHHHHHHHHCCS
T ss_pred hCCHHHHHHHHHHHHHCCCCEEEEcCCcC---chhHHHHHHHHHHHHHHhC-CCeEEEeC---CC--HHHHHHHHHhCCC
Confidence 46789999999999999999988877653 1234688889999998764 44555533 23 6677766667 8
Q ss_pred CCeee-eccccc--hHHHhh----------cCC-----CCCHH----HHHHHHHHHHHhCCCce---eeEeEEeec-CCC
Q psy2895 165 PDVLN-HNIETV--PRLYKK----------VRP-----GSDYK----HSLNLLKNFKKLYPNIL---TKSGIMVGL-GEN 218 (293)
Q Consensus 165 ~~~i~-~~less--~~~~~~----------i~~-----~~~~e----~~l~~i~~~~~~~pgi~---~~~~~ivG~-gEt 218 (293)
.+.++ ++.+.. ++++.. |+- ..+.+ ...+.++.+.++ |+. +-.+-.+|+ |-+
T Consensus 101 a~iINdvs~~~d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~~--Gi~~~~IilDPg~gfigk~ 178 (271)
T 2yci_X 101 HAMINSTSADQWKMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMELVANADAH--GIPMTELYIDPLILPVNVA 178 (271)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHHT--TCCGGGEEEECCCCCTTTS
T ss_pred CCEEEECCCCccccHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHC--CCCcccEEEecCCCccccC
Confidence 88876 554322 334332 121 12333 344556677888 995 778888888 888
Q ss_pred HHHHHHHHHHHHhC
Q psy2895 219 DEEILTVIHDMRNH 232 (293)
Q Consensus 219 ~ed~~~~l~~l~~l 232 (293)
.++-.++++.++.+
T Consensus 179 ~~~~~~~l~~l~~~ 192 (271)
T 2yci_X 179 QEHAVEVLETIRQI 192 (271)
T ss_dssp THHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 87766666666554
No 32
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=94.92 E-value=0.9 Score=39.74 Aligned_cols=138 Identities=15% Similarity=0.136 Sum_probs=84.5
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecC-CCCC--------CCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNR-DDLH--------DGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHV 156 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~-~~l~--------~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~ 156 (293)
+..+.+++++.++++.+.|+.-|-+.|... |... ..+.+++..+++.+++.. ++.|.+=| .. .++
T Consensus 44 ~~~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~-~vpISIDT---~~--~~V 117 (314)
T 3tr9_A 44 PHLDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRF-PQLISVDT---SR--PRV 117 (314)
T ss_dssp BCCSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHC-CSEEEEEC---SC--HHH
T ss_pred ccCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhC-CCeEEEeC---CC--HHH
Confidence 557899999999999999999887765321 1110 012345777788887753 45566533 33 566
Q ss_pred HHHHHHcCCCeee-eccccchHHHhhc----------C-CC--CC-------------HHHHHHHHHHHHHhCCCce---
Q psy2895 157 LKIFKQALPDVLN-HNIETVPRLYKKV----------R-PG--SD-------------YKHSLNLLKNFKKLYPNIL--- 206 (293)
Q Consensus 157 l~~l~~aG~~~i~-~~less~~~~~~i----------~-~~--~~-------------~e~~l~~i~~~~~~~pgi~--- 206 (293)
+++--++|.+.++ ++....+++++.+ + ++ .+ .+...+.++.+.++ |+.
T Consensus 118 a~aAl~aGa~iINDVsg~~~~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~--GI~~~~ 195 (314)
T 3tr9_A 118 MREAVNTGADMINDQRALQLDDALTTVSALKTPVCLMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKA--GISEDR 195 (314)
T ss_dssp HHHHHHHTCCEEEETTTTCSTTHHHHHHHHTCCEEEECCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHT--TCCGGG
T ss_pred HHHHHHcCCCEEEECCCCCchHHHHHHHHhCCeEEEECCCCCCcccccccccchHHHHHHHHHHHHHHHHHc--CCCHhH
Confidence 6666667888775 3332223333321 2 11 11 33455667788888 994
Q ss_pred eeEeEEee---cCCCHHHHHHHHHHHHh
Q psy2895 207 TKSGIMVG---LGENDEEILTVIHDMRN 231 (293)
Q Consensus 207 ~~~~~ivG---~gEt~ed~~~~l~~l~~ 231 (293)
+-.+=-+| ||.|.++=.++++.+..
T Consensus 196 IilDPG~G~~~F~Kt~~~n~~lL~~l~~ 223 (314)
T 3tr9_A 196 IIIDPGFGQGNYGKNVSENFYLLNKLPE 223 (314)
T ss_dssp EEEECCCCSGGGCCCHHHHHHHHHTTHH
T ss_pred EEEeCCCCchhhcCCHHHHHHHHHHHHH
Confidence 65665578 88898876666665544
No 33
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=94.84 E-value=0.22 Score=43.75 Aligned_cols=139 Identities=12% Similarity=0.086 Sum_probs=79.6
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecC-CC--CC-CCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNR-DD--LH-DGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFK 161 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~-~~--l~-~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~ 161 (293)
+..+.+.+++.++++.+.|+.-|-+.|... |. .+ ..+.+++..+++.+++..+++.|.+=| .. .+.+++--
T Consensus 60 ~~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpISIDT---~~--~~VaeaAl 134 (318)
T 2vp8_A 60 ATFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISVDT---WR--AQVAKAAC 134 (318)
T ss_dssp ----CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEEEEEC---SC--HHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEEeC---CC--HHHHHHHH
Confidence 457899999999999999999888765321 11 11 122356677788888776666676633 22 55666655
Q ss_pred HcCCCeee-eccccchHHHhh----------cC-CCC---C------H------------HHHHHHHHHHHHhCCCce--
Q psy2895 162 QALPDVLN-HNIETVPRLYKK----------VR-PGS---D------Y------------KHSLNLLKNFKKLYPNIL-- 206 (293)
Q Consensus 162 ~aG~~~i~-~~less~~~~~~----------i~-~~~---~------~------------e~~l~~i~~~~~~~pgi~-- 206 (293)
++|.+.++ ++....+++++. |+ ++. + + +...+.++.+.++ |+.
T Consensus 135 ~aGa~iINDVsg~~d~~m~~vaa~~g~~vVlmh~~G~~p~tmq~~~~y~~~~~dv~~ev~~~l~~~i~~a~~a--GI~~~ 212 (318)
T 2vp8_A 135 AAGADLINDTWGGVDPAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVAA--GVARE 212 (318)
T ss_dssp HHTCCEEEETTSSSSTTHHHHHHHHTCEEEEECC-------------CCSCHHHHHHHHHHHHHHHHHHHHHT--TCCGG
T ss_pred HhCCCEEEECCCCCchHHHHHHHHhCCCEEEECCCCCCccccccccccccccccHHHHHHHHHHHHHHHHHHc--CCChh
Confidence 66877664 322112333322 22 111 1 1 3344557778888 994
Q ss_pred -eeEeEEeecCCCHHHHHHHHHHHHh
Q psy2895 207 -TKSGIMVGLGENDEEILTVIHDMRN 231 (293)
Q Consensus 207 -~~~~~ivG~gEt~ed~~~~l~~l~~ 231 (293)
+-.|=-+||+-|.++-.++++.+.+
T Consensus 213 ~IilDPG~GF~Kt~~~nl~ll~~l~~ 238 (318)
T 2vp8_A 213 KVLIDPAHDFGKNTFHGLLLLRHVAD 238 (318)
T ss_dssp GEEEETTTTCCTTSHHHHHHHHTHHH
T ss_pred hEEEcCCCCcccCHHHHHHHHHHHHH
Confidence 6666666787777776666666654
No 34
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=94.69 E-value=1.1 Score=37.78 Aligned_cols=132 Identities=9% Similarity=0.056 Sum_probs=94.2
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCC-------cCcHHHHHHHH
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDF-------RNQINHVLKIF 160 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~-------~~~~~e~l~~l 160 (293)
+++..+.+..+.+.++ +..+-|.+|... +. +.+.+.+.++..++. +|.+++.|+ -+..++.++..
T Consensus 23 lg~~~~~d~Le~~g~y-ID~lKfg~Gt~~-l~--~~~~l~eki~l~~~~----gV~v~~GGTl~E~~~~qg~~~~yl~~~ 94 (251)
T 1qwg_A 23 LPPKFVEDYLKVCGDY-IDFVKFGWGTSA-VI--DRDVVKEKINYYKDW----GIKVYPGGTLFEYAYSKGKFDEFLNEC 94 (251)
T ss_dssp CCHHHHHHHHHHHGGG-CSEEEECTTGGG-GS--CHHHHHHHHHHHHTT----TCEEEECHHHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHhhhh-cceEEecCceee-ec--CHHHHHHHHHHHHHc----CCeEECCcHHHHHHHHcCcHHHHHHHH
Confidence 6677776666655454 788888888742 31 245688888877775 466666542 12358899999
Q ss_pred HHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-------CCCHHHHHHHHHHHHhCC
Q psy2895 161 KQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-------GENDEEILTVIHDMRNHN 233 (293)
Q Consensus 161 ~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-------gEt~ed~~~~l~~l~~l~ 233 (293)
++.|++.+-++--+. .-+.+++++.|+.+++. |+.+-+-+ |- -.+++++++.++.-.+.|
T Consensus 95 k~lGf~~iEiS~G~i---------~l~~~~~~~~I~~~~~~--G~~v~~Ev--G~k~~~~~~~~~~~~~I~~~~~~LeAG 161 (251)
T 1qwg_A 95 EKLGFEAVEISDGSS---------DISLEERNNAIKRAKDN--GFMVLTEV--GKKMPDKDKQLTIDDRIKLINFDLDAG 161 (251)
T ss_dssp HHHTCCEEEECCSSS---------CCCHHHHHHHHHHHHHT--TCEEEEEE--CCSSHHHHTTCCHHHHHHHHHHHHHHT
T ss_pred HHcCCCEEEECCCcc---------cCCHHHHHHHHHHHHHC--CCEEeeec--cccCCcccCCCCHHHHHHHHHHHHHCC
Confidence 999999988763221 34688899999999999 99764432 43 257788999988888899
Q ss_pred CCEEEee
Q psy2895 234 IDILTIG 240 (293)
Q Consensus 234 ~~~i~i~ 240 (293)
.+.|-+-
T Consensus 162 A~~ViiE 168 (251)
T 1qwg_A 162 ADYVIIE 168 (251)
T ss_dssp CSEEEEC
T ss_pred CcEEEEe
Confidence 9988774
No 35
>3c6c_A 3-keto-5-aminohexanoate cleavage enzyme; DUF849 family protein, TIM beta/alpha-barrel fold, structura genomics; HET: MSE; 1.72A {Ralstonia eutropha}
Probab=94.65 E-value=0.4 Score=41.99 Aligned_cols=118 Identities=14% Similarity=0.153 Sum_probs=74.8
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCC-CCCCChhHHHHHHHHHHhhCCCcEEEEEcC------CCc--C------
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDD-LHDGGSSHFVSCIKHIRKLSTKIKIEILIP------DFR--N------ 151 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~-l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~------~~~--~------ 151 (293)
.++++||.+.+.++.+.|+.-+++-.=++.+ -+..+.+.|.++++.|++..+++-|.++|. +-. .
T Consensus 44 PvTpeEIa~~A~~a~~AGAaivHlHvRd~~~G~ps~d~~~y~e~~~~IR~~~~d~ii~~TTg~gg~~~g~~~~p~~~~~~ 123 (316)
T 3c6c_A 44 PITPAQIADACVEAAKAGASVAHIHVRDPKTGGGSRDPVLFKEVVDRVRSSGTDIVLNLTCGLGAFLLPDPEDESKALPE 123 (316)
T ss_dssp CCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHTTTCCCEEEEECCCSEEECEETTEEEEECTT
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHHCCCeEEEeCCCccccccCcccCccccccc
Confidence 4889999999999999999988886655311 123457899999999998877877777664 110 0
Q ss_pred ----cHHHHHHHHHHcCCCeeeecccc-ch--HHHhhcCCCCCHHHHHHHHHHHHHhCCCcee
Q psy2895 152 ----QINHVLKIFKQALPDVLNHNIET-VP--RLYKKVRPGSDYKHSLNLLKNFKKLYPNILT 207 (293)
Q Consensus 152 ----~~~e~l~~l~~aG~~~i~~~les-s~--~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~ 207 (293)
..++.+.-+.+...+..+++.-| +- ..-+.+- ..+++...+.++.+++. |+..
T Consensus 124 ~~l~~~eeR~~~~~~~~Pe~aSl~~Gs~Nf~~~~~~~v~-~n~~~~i~~~~~~~~e~--Gv~p 183 (316)
T 3c6c_A 124 SDVVPVAERVKHLEDCLPEIASLDITTGNQVEGKLEFVY-LNTTRTLRAMARRFQEL--GIKP 183 (316)
T ss_dssp CEECCHHHHTHHHHHHCCSEEEEECCCEEEEETTEEEEE-CCCHHHHHHHHHHHHHH--TCEE
T ss_pred cccCCHHHHHHHHHhcCCCeEEeccccccccCCCCceee-cCCHHHHHHHHHHHHHc--CCeE
Confidence 22566666655567777554433 10 0000010 13556666666666666 6644
No 36
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=94.61 E-value=0.68 Score=39.92 Aligned_cols=139 Identities=9% Similarity=0.108 Sum_probs=87.3
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEee-ecCCCCC----CCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITS-VNRDDLH----DGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIF 160 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~g-g~~~~l~----~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l 160 (293)
+..+.+++++.++++.+.|+.-|-+.| +..|.-. ..+.+++..+++.+++.. ++.|.+-| .. .+.++.-
T Consensus 33 ~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~-~~piSIDT---~~--~~va~aA 106 (282)
T 1aj0_A 33 THNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF-EVWISVDT---SK--PEVIRES 106 (282)
T ss_dssp CCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC-CCEEEEEC---CC--HHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc-CCeEEEeC---CC--HHHHHHH
Confidence 457899999999999999999988876 3222211 123466777888887654 44555533 22 5566665
Q ss_pred HHcCCCeee-eccccchHHHhh----------cC-CC--CC--------------HHHHHHHHHHHHHhCCCce---eeE
Q psy2895 161 KQALPDVLN-HNIETVPRLYKK----------VR-PG--SD--------------YKHSLNLLKNFKKLYPNIL---TKS 209 (293)
Q Consensus 161 ~~aG~~~i~-~~less~~~~~~----------i~-~~--~~--------------~e~~l~~i~~~~~~~pgi~---~~~ 209 (293)
-++|.+.++ ++....+++++. |+ ++ .+ .+...+.++.+.++ |+. +-.
T Consensus 107 l~aGa~iINdvsg~~d~~~~~~~a~~~~~vVlmh~~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~~--Gi~~~~Iil 184 (282)
T 1aj0_A 107 AKVGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQA--GIAKEKLLL 184 (282)
T ss_dssp HHTTCCEEEETTTTCSTTHHHHHHHHTCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHT--TCCGGGEEE
T ss_pred HHcCCCEEEECCCCCCHHHHHHHHHhCCeEEEEccCCCCccccccCccchHHHHHHHHHHHHHHHHHHc--CCChhhEEE
Confidence 566777764 232122222221 11 11 11 45566778888888 995 667
Q ss_pred eEEeecCCCHHHHHHHHHHHHhC
Q psy2895 210 GIMVGLGENDEEILTVIHDMRNH 232 (293)
Q Consensus 210 ~~ivG~gEt~ed~~~~l~~l~~l 232 (293)
|--+|++.|.++-.++++.++.+
T Consensus 185 DPg~gf~k~~~~n~~ll~~l~~~ 207 (282)
T 1aj0_A 185 DPGFGFGKNLSHNYSLLARLAEF 207 (282)
T ss_dssp ECCTTSSCCHHHHHHHHHTGGGG
T ss_pred eCCCCcccCHHHHHHHHHHHHHH
Confidence 76677888888877777777654
No 37
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint CENT structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=94.40 E-value=1.1 Score=39.13 Aligned_cols=85 Identities=13% Similarity=0.143 Sum_probs=59.3
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCC-CCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCc-C--cHHHHHHHHHH
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRD-DLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFR-N--QINHVLKIFKQ 162 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~-~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~-~--~~~e~l~~l~~ 162 (293)
.++++||.+.+.++.+.|+.-+++-.=++. .-+..+.+.|.++++.|++. +++-|.++|.+.. - ..++.+..+.+
T Consensus 28 PvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~y~e~i~~IR~~-~d~iI~~TTgg~~~~~~~~eeR~~~~~~ 106 (314)
T 3lot_A 28 PVTPDQIVEEAVKAAEAGAGMVHIHARDPKDGRPTTDVEVFRYICREIKKQ-SDVVINVTTGGGGTLGIPVEERAKVVPA 106 (314)
T ss_dssp CCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHHH-CCCEEEECSSTTGGGTCCHHHHTTHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeecCCCCCCcCCCHHHHHHHHHHHHhc-CCeEEEeCCCCcCCCCCCHHHHHHHHHh
Confidence 588999999999999999998888765531 11234578999999999987 4666777664211 1 12566666655
Q ss_pred cCCCeeeecc
Q psy2895 163 ALPDVLNHNI 172 (293)
Q Consensus 163 aG~~~i~~~l 172 (293)
...+..+++.
T Consensus 107 ~~Pe~aSln~ 116 (314)
T 3lot_A 107 LKPEIATFNM 116 (314)
T ss_dssp HCCSEEEEEC
T ss_pred cCCceeeecC
Confidence 5666666544
No 38
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=94.12 E-value=2.2 Score=37.11 Aligned_cols=121 Identities=12% Similarity=0.036 Sum_probs=73.3
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEE-cCC-C--cCcHHHHHHHHH-
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEIL-IPD-F--RNQINHVLKIFK- 161 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~-~~~-~--~~~~~e~l~~l~- 161 (293)
..+.+++.+.+..+.+.|++.|+...|+++.-.+....+-.+|++.|++.. ++.|.+. .|. . ..+.+..++.|+
T Consensus 93 ~~~~~~l~~~L~~~~~~GI~nILaLrGDpp~~~~~~~~~A~dLv~~ir~~~-~f~IgvA~yPE~Hp~a~~~~~d~~~Lk~ 171 (304)
T 3fst_A 93 DATPDELRTIARDYWNNGIRHIVALRGDLPPGSGKPEMYASDLVTLLKEVA-DFDISVAAYPEVHPEAKSAQADLLNLKR 171 (304)
T ss_dssp TSCHHHHHHHHHHHHHTTCCEEEEECCCCC------CCCHHHHHHHHHHHC-CCEEEEEECTTCCTTCSCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEecCCCCCCCCCCCCCHHHHHHHHHHcC-CCeEEEEeCCCcCCCCCCHHHHHHHHHH
Confidence 368899999999999999999998888864322223456778888888763 5666653 341 1 111122344443
Q ss_pred --HcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec--CCCHHHHHH
Q psy2895 162 --QALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL--GENDEEILT 224 (293)
Q Consensus 162 --~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~--gEt~ed~~~ 224 (293)
+||.+.+-= | .-++.+.+.+.++.+++. |+. .-++.|+ -.+...+..
T Consensus 172 KvdAGAdf~iT--Q----------~ffD~~~~~~f~~~~r~~--Gi~--vPIi~GImPi~s~~~~~~ 222 (304)
T 3fst_A 172 KVDAGANRAIT--Q----------FFFDVESYLRFRDRCVSA--GID--VEIIPGILPVSNFKQAKK 222 (304)
T ss_dssp HHHHTCCEEEE--C----------CCSCHHHHHHHHHHHHHT--TCC--SCEECEECCCSCHHHHHH
T ss_pred HHHcCCCEEEe--C----------ccCCHHHHHHHHHHHHhc--CCC--CcEEEEecccCCHHHHHH
Confidence 578886421 0 133666667777777777 763 3566676 344444433
No 39
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=93.99 E-value=2.3 Score=35.44 Aligned_cols=114 Identities=14% Similarity=0.075 Sum_probs=78.2
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCC
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPD 166 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~ 166 (293)
..++++..+.++.+.+.|++-|-++--.+ .-.+.++.+++.+|+.-+-.-+ .++ .+.++...++|.+
T Consensus 42 ~~~~~~a~~~a~al~~gGi~~iEvt~~t~---------~a~e~I~~l~~~~~~~~iGaGT--Vlt--~~~a~~Ai~AGA~ 108 (232)
T 4e38_A 42 IDNAEDIIPLGKVLAENGLPAAEITFRSD---------AAVEAIRLLRQAQPEMLIGAGT--ILN--GEQALAAKEAGAT 108 (232)
T ss_dssp CSSGGGHHHHHHHHHHTTCCEEEEETTST---------THHHHHHHHHHHCTTCEEEEEC--CCS--HHHHHHHHHHTCS
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEeCCCC---------CHHHHHHHHHHhCCCCEEeECC--cCC--HHHHHHHHHcCCC
Confidence 35789999999999999999888764332 2347888888877765444432 344 7788998999999
Q ss_pred eeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEeec
Q psy2895 167 VLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQ 241 (293)
Q Consensus 167 ~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~~ 241 (293)
.+..+- .+ .+.++.+++. |+.+ |.|. -|+.|+... .++|.+.+.++|
T Consensus 109 fIvsP~-------------~~----~~vi~~~~~~--gi~~----ipGv-~TptEi~~A----~~~Gad~vK~FP 155 (232)
T 4e38_A 109 FVVSPG-------------FN----PNTVRACQEI--GIDI----VPGV-NNPSTVEAA----LEMGLTTLKFFP 155 (232)
T ss_dssp EEECSS-------------CC----HHHHHHHHHH--TCEE----ECEE-CSHHHHHHH----HHTTCCEEEECS
T ss_pred EEEeCC-------------CC----HHHHHHHHHc--CCCE----EcCC-CCHHHHHHH----HHcCCCEEEECc
Confidence 886431 11 2455667777 7755 3343 277776555 468888888864
No 40
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=93.96 E-value=0.87 Score=39.50 Aligned_cols=138 Identities=12% Similarity=0.075 Sum_probs=75.3
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeec-CCC---C-CCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVN-RDD---L-HDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIF 160 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~-~~~---l-~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l 160 (293)
+..+.+.+++.++++.+.|+.-|-+.|.. .|. . ...+.+++..+++.+++. ++.|.+=| .. .+.+++-
T Consensus 47 ~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~--~vpiSIDT---~~--~~Va~aA 119 (294)
T 2dqw_A 47 RYLDPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSL--GVPVSVDT---RK--PEVAEEA 119 (294)
T ss_dssp ------CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTT--CSCEEEEC---SC--HHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhC--CCeEEEEC---CC--HHHHHHH
Confidence 45688999999999999999988876622 111 1 123457788888888764 44555533 22 4444444
Q ss_pred HHcCCCeee-eccccchHHHhh----------cC-C-C--CC--------------HHHHHHHHHHHHHhCCCce-eeEe
Q psy2895 161 KQALPDVLN-HNIETVPRLYKK----------VR-P-G--SD--------------YKHSLNLLKNFKKLYPNIL-TKSG 210 (293)
Q Consensus 161 ~~aG~~~i~-~~less~~~~~~----------i~-~-~--~~--------------~e~~l~~i~~~~~~~pgi~-~~~~ 210 (293)
-++|.+.++ ++....+++++. |+ + + .+ .+...+.++.+.++ |+. +-.+
T Consensus 120 l~aGa~iINdVsg~~d~~m~~v~a~~~~~vVlmh~~eG~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~~~--Gi~~IilD 197 (294)
T 2dqw_A 120 LKLGAHLLNDVTGLRDERMVALAARHGVAAVVMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRALSA--GVPQVVLD 197 (294)
T ss_dssp HHHTCSEEECSSCSCCHHHHHHHHHHTCEEEEECCSSSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHHHT--TCSCEEEE
T ss_pred HHhCCCEEEECCCCCChHHHHHHHHhCCCEEEEcCCCCCCccccccCccccHHHHHHHHHHHHHHHHHHC--CCCcEEEc
Confidence 445655543 222111222221 11 1 0 11 23455567778888 985 4444
Q ss_pred EEeecCCCHHHHHHHHHHHHhC
Q psy2895 211 IMVGLGENDEEILTVIHDMRNH 232 (293)
Q Consensus 211 ~ivG~gEt~ed~~~~l~~l~~l 232 (293)
--+|||.|.++-.++++.++++
T Consensus 198 PG~Gf~kt~~~n~~ll~~l~~~ 219 (294)
T 2dqw_A 198 PGFGFGKLLEHNLALLRRLDEI 219 (294)
T ss_dssp CCTTSSCCHHHHHHHHHTHHHH
T ss_pred CCCCcccCHHHHHHHHHHHHHH
Confidence 4447789988777777776554
No 41
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=93.73 E-value=0.75 Score=39.91 Aligned_cols=139 Identities=12% Similarity=0.095 Sum_probs=84.6
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeec-CCCCC----CCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVN-RDDLH----DGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIF 160 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~-~~~l~----~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l 160 (293)
+..+.+.+++.++++.+.|+.-|-+.|.. .|... ..+.+++..+++.+++. ++.|.+=| .. .++++.-
T Consensus 41 ~~~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~--~vpiSIDT---~~--~~Va~aA 113 (294)
T 2y5s_A 41 RFLARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPL--NVPLSIDT---YK--PAVMRAA 113 (294)
T ss_dssp ---CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGG--CSCEEEEC---CC--HHHHHHH
T ss_pred CcCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhC--CCeEEEEC---CC--HHHHHHH
Confidence 45789999999999999999988876632 12111 12245677777777654 44565533 33 5666665
Q ss_pred HHcCCCeee-eccccchHHHhhc----------C-C--CCC---------------HHHHHHHHHHHHHhCCCce---ee
Q psy2895 161 KQALPDVLN-HNIETVPRLYKKV----------R-P--GSD---------------YKHSLNLLKNFKKLYPNIL---TK 208 (293)
Q Consensus 161 ~~aG~~~i~-~~less~~~~~~i----------~-~--~~~---------------~e~~l~~i~~~~~~~pgi~---~~ 208 (293)
-++|.+.++ ++....+++++.+ + + +.+ .+...+.++.+.++ |+. +-
T Consensus 114 l~aGa~iINdVsg~~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~ev~~~l~~~i~~a~~~--Gi~~~~Ii 191 (294)
T 2y5s_A 114 LAAGADLINDIWGFRQPGAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRDA--GVAAERIC 191 (294)
T ss_dssp HHHTCSEEEETTTTCSTTHHHHHSSSSCEEEEECCCEETTTTEECCCCCSSHHHHHHHHHHHHHHHHHHT--TCCGGGEE
T ss_pred HHcCCCEEEECCCCCchHHHHHHHHhCCCEEEECCCCCCccccccCCccccHHHHHHHHHHHHHHHHHHc--CCChhhEE
Confidence 567877764 3322123333321 1 1 001 33455567778888 995 66
Q ss_pred EeEEeecCCCH-HHHHHHHHHHHhCC
Q psy2895 209 SGIMVGLGEND-EEILTVIHDMRNHN 233 (293)
Q Consensus 209 ~~~ivG~gEt~-ed~~~~l~~l~~l~ 233 (293)
.+--+|++.|. ++-.++++.+.++.
T Consensus 192 lDPG~Gf~kt~~~~n~~ll~~l~~l~ 217 (294)
T 2y5s_A 192 VDPGFGFGKAVVDDNYALLAALPDTA 217 (294)
T ss_dssp EECCTTSSSCTTHHHHHHHHTGGGGS
T ss_pred EeCCCcccccchHHHHHHHHHHHHHH
Confidence 77667787777 77778888777665
No 42
>3e49_A Uncharacterized protein DUF849 with A TIM barrel; structural genomics, joint center for structural genomics; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=93.47 E-value=2 Score=37.52 Aligned_cols=84 Identities=10% Similarity=0.154 Sum_probs=58.3
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCC-CCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCC-cCcHHHHHHHHHHcC
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRD-DLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDF-RNQINHVLKIFKQAL 164 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~-~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~-~~~~~e~l~~l~~aG 164 (293)
.++++||.+.+.++.+.|+.-+++-.=++. --+..+.+.|.++++.|++..+ .-|.+.|.+. .-..++.++.+.+..
T Consensus 28 PvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d-~iI~~TTgg~~~~~~eerla~~~~~~ 106 (311)
T 3e49_A 28 PVTPDEVAQASIGAAEAGAAVIHLHARDPRDGRPTQDPAAFAEFLPRIKSNTD-AVINLTTGGSPHMTVEERLRPATHYM 106 (311)
T ss_dssp CCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTHHHHHHHHCC-CEEEECSCSCTTSCHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCC-cEEEECCCCCCCCCHHHHHHHHHhcC
Confidence 488999999999999999998888765531 1123457899999999998864 4465555321 111266777776656
Q ss_pred CCeeeec
Q psy2895 165 PDVLNHN 171 (293)
Q Consensus 165 ~~~i~~~ 171 (293)
.+..+++
T Consensus 107 Pe~aSln 113 (311)
T 3e49_A 107 PELASLN 113 (311)
T ss_dssp CSEEEEE
T ss_pred CCeeeec
Confidence 7766554
No 43
>3e02_A Uncharacterized protein DUF849; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia xenovorans LB400}
Probab=93.40 E-value=1.7 Score=37.89 Aligned_cols=84 Identities=13% Similarity=0.130 Sum_probs=58.2
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCC-CCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCC-cCcHHHHHHHHHHcC
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRD-DLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDF-RNQINHVLKIFKQAL 164 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~-~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~-~~~~~e~l~~l~~aG 164 (293)
.++++||.+.+.++.+.|+.-+++-.=++. .-+..+.+.|.++++.|++..+ .-|.+.|.+. .-..++.+..+.+..
T Consensus 28 PvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~d-~iI~~TTgg~~~~~~eerla~~~~~~ 106 (311)
T 3e02_A 28 PITPEEIVKEGVAAAEAGAAMLHLHARDPLNGRPSQDPDLFMRFLPQLKERTD-AILNITTGGGLGMSLDERLAPARAAR 106 (311)
T ss_dssp CCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTTHHHHHHHCC-CEEEECSSCSTTCCHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhCC-cEEEECCCCCCCCCHHHHHHHHHhcC
Confidence 488999999999999999998888765531 1123457889999999998864 4465555321 111266777776656
Q ss_pred CCeeeec
Q psy2895 165 PDVLNHN 171 (293)
Q Consensus 165 ~~~i~~~ 171 (293)
.+..+++
T Consensus 107 Pe~aSln 113 (311)
T 3e02_A 107 PEVASMN 113 (311)
T ss_dssp CSEEEEE
T ss_pred CCeeeec
Confidence 6666554
No 44
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=93.04 E-value=1.4 Score=38.50 Aligned_cols=113 Identities=13% Similarity=0.099 Sum_probs=69.1
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCC-C---C--CChhHHHHHHHHHHhhCCC-cEEEEE-cC-CC--cCcHHH
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDL-H---D--GGSSHFVSCIKHIRKLSTK-IKIEIL-IP-DF--RNQINH 155 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l-~---~--~~~~~~~~ll~~i~~~~~~-~~i~~~-~~-~~--~~~~~e 155 (293)
..+.+++.+.+..+.+.|++.|....|+++.. . + .++++-.+|++.|++..++ +.|-+. .| +. ..+.+.
T Consensus 82 ~~~~~~l~~~L~~~~~~GI~niLaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~~g~~f~igvA~yPE~Hp~~~~~~~ 161 (310)
T 3apt_A 82 GQSRKEVAEVLHRFVESGVENLLALRGDPPRGERVFRPHPEGFRYAAELVALIRERYGDRVSVGGAAYPEGHPESESLEA 161 (310)
T ss_dssp TSCHHHHHHHHHHHHHTTCCEEEEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHHHGGGSEEEEEECTTCCTTSSCHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCCeEEEEEeCCCcCCCCCCHHH
Confidence 47889999999999999999998888886432 1 1 1245778899988887334 666663 35 21 112122
Q ss_pred HHHHHH---HcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec
Q psy2895 156 VLKIFK---QALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL 215 (293)
Q Consensus 156 ~l~~l~---~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~ 215 (293)
.++.|+ ++|.+.+- . | .-++.+.+.+.++.+++. |+. .-++.|+
T Consensus 162 d~~~Lk~Kv~aGAdf~i-T-Q----------~ffD~~~~~~f~~~~r~~--Gi~--vPIi~GI 208 (310)
T 3apt_A 162 DLRHFKAKVEAGLDFAI-T-Q----------LFFNNAHYFGFLERARRA--GIG--IPILPGI 208 (310)
T ss_dssp HHHHHHHHHHHHCSEEE-E-C----------CCSCHHHHHHHHHHHHHT--TCC--SCEECEE
T ss_pred HHHHHHHHHHcCCCEEE-e-c----------ccCCHHHHHHHHHHHHHc--CCC--CeEEEEe
Confidence 333333 47887542 1 0 123566666667777777 753 3444554
No 45
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=92.64 E-value=3.8 Score=33.90 Aligned_cols=72 Identities=15% Similarity=0.058 Sum_probs=52.2
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCC
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPD 166 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~ 166 (293)
..+.++..+.++.+.+.|++-+-++--. ..-.+.++.+++.+|+..+..-+ .+. .+.++...++|.|
T Consensus 25 ~~~~~~~~~~~~al~~gGv~~iel~~k~---------~~~~~~i~~l~~~~~~l~vgaGt--vl~--~d~~~~A~~aGAd 91 (224)
T 1vhc_A 25 LDNADDILPLADTLAKNGLSVAEITFRS---------EAAADAIRLLRANRPDFLIAAGT--VLT--AEQVVLAKSSGAD 91 (224)
T ss_dssp CSSGGGHHHHHHHHHHTTCCEEEEETTS---------TTHHHHHHHHHHHCTTCEEEEES--CCS--HHHHHHHHHHTCS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeccC---------chHHHHHHHHHHhCcCcEEeeCc--Eee--HHHHHHHHHCCCC
Confidence 3678899999999999999988776211 12346778888887765554433 233 5778888889999
Q ss_pred eeeec
Q psy2895 167 VLNHN 171 (293)
Q Consensus 167 ~i~~~ 171 (293)
.++.+
T Consensus 92 ~v~~p 96 (224)
T 1vhc_A 92 FVVTP 96 (224)
T ss_dssp EEECS
T ss_pred EEEEC
Confidence 99766
No 46
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=92.44 E-value=2.7 Score=41.09 Aligned_cols=136 Identities=14% Similarity=0.078 Sum_probs=84.5
Q ss_pred CChhHHHHHHHHHHHC--CCcEEEEeeecC-----CCCCCCChhHHHHHHHHHHhhCCCcEEEEEc---C--CCc---Cc
Q psy2895 88 LDIEEPKKIAYTINKL--KLNYVVITSVNR-----DDLHDGGSSHFVSCIKHIRKLSTKIKIEILI---P--DFR---NQ 152 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~--G~~~i~l~gg~~-----~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~---~--~~~---~~ 152 (293)
++.++.+++++.+.+. |+..|-..||.. +.+...++ +.++.+++..|+..+.... + ++. .+
T Consensus 122 ~~~edkl~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~e~p~----e~l~~l~~~~~~~~l~~l~R~~n~vgy~~~p~~ 197 (718)
T 3bg3_A 122 VRTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAMRFLYECPW----RRLQELRELIPNIPFQMLLRGANAVGYTNYPDN 197 (718)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHTSCCCHH----HHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHH
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEecCCcchhhccccCCCCHH----HHHHHHHHHcccchHHHHhcccccccccccCCc
Confidence 8899999999999998 566787765542 11111122 3445555555665555432 1 211 11
Q ss_pred -HHHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEee---c-C--C--CHHHHH
Q psy2895 153 -INHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVG---L-G--E--NDEEIL 223 (293)
Q Consensus 153 -~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG---~-g--E--t~ed~~ 223 (293)
..+.++...++|++.+.+..-.+ ..+.....++.+++. |..+...+.+. . . . +.+.+.
T Consensus 198 ~~~~~i~~a~~~Gvd~irIf~s~n-----------~l~~l~~~i~~ak~~--G~~v~~~i~~~~d~~dp~r~~~~~e~~~ 264 (718)
T 3bg3_A 198 VVFKFCEVAKENGMDVFRVFDSLN-----------YLPNMLLGMEAAGSA--GGVVEAAISYTGDVADPSRTKYSLQYYM 264 (718)
T ss_dssp HHHHHHHHHHHHTCCEEEEECSSC-----------CHHHHHHHHHHHHTT--TSEEEEEEECCSCTTCTTCCTTCHHHHH
T ss_pred chHHHHHHHHhcCcCEEEEEecHH-----------HHHHHHHHHHHHHHc--CCeEEEEEEeeccccCCCCCCCCHHHHH
Confidence 25677888889999988753111 345566777777777 77665544443 1 1 1 667777
Q ss_pred HHHHHHHhCCCCEEEee
Q psy2895 224 TVIHDMRNHNIDILTIG 240 (293)
Q Consensus 224 ~~l~~l~~l~~~~i~i~ 240 (293)
+.++.+.+.|++.|.+.
T Consensus 265 ~~a~~l~~~Ga~~I~l~ 281 (718)
T 3bg3_A 265 GLAEELVRAGTHILCIK 281 (718)
T ss_dssp HHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHcCCCEEEEc
Confidence 88888888888877663
No 47
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=92.39 E-value=3.9 Score=33.51 Aligned_cols=113 Identities=14% Similarity=0.045 Sum_probs=72.0
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCC
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPD 166 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~ 166 (293)
..+.++..+.++.+.+.|++-+-++--. ..-.+.++.+++.+|+..+..-+ ++. .+.++...++|.|
T Consensus 24 ~~~~~~~~~~~~al~~gGv~~iel~~k~---------~~~~~~i~~l~~~~~~~~vgagt--vi~--~d~~~~A~~aGAd 90 (214)
T 1wbh_A 24 VKKLEHAVPMAKALVAGGVRVLNVTLRT---------ECAVDAIRAIAKEVPEAIVGAGT--VLN--PQQLAEVTEAGAQ 90 (214)
T ss_dssp CSSGGGHHHHHHHHHHTTCCEEEEESCS---------TTHHHHHHHHHHHCTTSEEEEES--CCS--HHHHHHHHHHTCS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCC---------hhHHHHHHHHHHHCcCCEEeeCE--EEE--HHHHHHHHHcCCC
Confidence 4678999999999999999988776221 12346778787777765544433 444 5778888889999
Q ss_pred eeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 167 VLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 167 ~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
.++.+ +++. +.++.+++. |. .+|.| -.|.+|+.. ..+.|.+.+.+|
T Consensus 91 ~v~~p-~~d~----------------~v~~~~~~~--g~----~~i~G-~~t~~e~~~----A~~~Gad~v~~F 136 (214)
T 1wbh_A 91 FAISP-GLTE----------------PLLKAATEG--TI----PLIPG-ISTVSELML----GMDYGLKEFKFF 136 (214)
T ss_dssp CEEES-SCCH----------------HHHHHHHHS--SS----CEEEE-ESSHHHHHH----HHHTTCCEEEET
T ss_pred EEEcC-CCCH----------------HHHHHHHHh--CC----CEEEe-cCCHHHHHH----HHHCCCCEEEEe
Confidence 99876 2221 344455555 43 33445 344555433 235677776664
No 48
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=92.14 E-value=1.4 Score=38.24 Aligned_cols=138 Identities=14% Similarity=0.130 Sum_probs=85.1
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeec-CCCCCC----CChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHH
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVN-RDDLHD----GGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFK 161 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~-~~~l~~----~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~ 161 (293)
..+.+.+++.++++.+.|+.-|-+.|.. .|.... .+.+++..+++.+++.. ++.|.+-| .. .+.+++--
T Consensus 59 ~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~-~vpiSIDT---~~--~~V~~aAl 132 (297)
T 1tx2_A 59 YNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV-KLPISIDT---YK--AEVAKQAI 132 (297)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS-CSCEEEEC---SC--HHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC-CceEEEeC---CC--HHHHHHHH
Confidence 4568999999999999999988876533 121111 12345666678877653 44565533 23 56666666
Q ss_pred HcCCCeee-ecccc-chHHHhhc----------C-CCC-C--------HHHHHHHHHHHHHhCCCce---eeEeEEeecC
Q psy2895 162 QALPDVLN-HNIET-VPRLYKKV----------R-PGS-D--------YKHSLNLLKNFKKLYPNIL---TKSGIMVGLG 216 (293)
Q Consensus 162 ~aG~~~i~-~~les-s~~~~~~i----------~-~~~-~--------~e~~l~~i~~~~~~~pgi~---~~~~~ivG~g 216 (293)
++|.+.++ ++... .+++++.+ + ++. . .+...+.++.+.++ |+. +-.|--+|+|
T Consensus 133 ~aGa~iINdvsg~~~d~~m~~~aa~~g~~vVlmh~~G~p~y~d~v~ev~~~l~~~i~~a~~~--GI~~~~IilDPg~Gfg 210 (297)
T 1tx2_A 133 EAGAHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNMNYRNLMADMIADLYDSIKIAKDA--GVRDENIILDPGIGFA 210 (297)
T ss_dssp HHTCCEEEETTTTSSCTHHHHHHHHHTCCEEEECCCSCCCCSSHHHHHHHHHHHHHHHHHHT--TCCGGGEEEECCTTSS
T ss_pred HcCCCEEEECCCCCCCHHHHHHHHHhCCcEEEEeCCCCCCcchHHHHHHHHHHHHHHHHHHc--CCChhcEEEeCCCCcC
Confidence 67888875 33332 34443321 1 111 1 24455567778888 996 6677777788
Q ss_pred CCHHHHHHHHHHHHhC
Q psy2895 217 ENDEEILTVIHDMRNH 232 (293)
Q Consensus 217 Et~ed~~~~l~~l~~l 232 (293)
-|.++-.++++.++.+
T Consensus 211 k~~~~n~~ll~~l~~l 226 (297)
T 1tx2_A 211 KTPEQNLEAMRNLEQL 226 (297)
T ss_dssp CCHHHHHHHHHTGGGG
T ss_pred CCHHHHHHHHHHHHHH
Confidence 8888777777766554
No 49
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=92.01 E-value=3.9 Score=33.97 Aligned_cols=97 Identities=10% Similarity=0.024 Sum_probs=60.7
Q ss_pred HHHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhC
Q psy2895 153 INHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNH 232 (293)
Q Consensus 153 ~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l 232 (293)
+++.++.++++|.+.+.+.... +....+.+++-+..+.+.+. |+.+.+.-. ...++.+.+.+.++.+.++
T Consensus 32 ~~~~l~~~~~~G~~~vEl~~~~-------~~~~~~~~~~~~~~~~l~~~--gl~i~~~~~-~~~~~~~~~~~~i~~A~~l 101 (257)
T 3lmz_A 32 LDTTLKTLERLDIHYLCIKDFH-------LPLNSTDEQIRAFHDKCAAH--KVTGYAVGP-IYMKSEEEIDRAFDYAKRV 101 (257)
T ss_dssp HHHHHHHHHHTTCCEEEECTTT-------SCTTCCHHHHHHHHHHHHHT--TCEEEEEEE-EEECSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEeccc-------CCCCCCHHHHHHHHHHHHHc--CCeEEEEec-cccCCHHHHHHHHHHHHHh
Confidence 3778888888888887765431 11123455555656666777 886543221 1247788888888888888
Q ss_pred CCCEEEeecCCCCCCCccccccccChhHHHHHHHHHHHhccc
Q psy2895 233 NIDILTIGQYLMPSRLHLPVHRYLHPKFFEKFKKIAYKLGFK 274 (293)
Q Consensus 233 ~~~~i~i~~~~~p~~~~~a~~r~~~p~~~~~~~~~~~~~G~~ 274 (293)
|...+.+. |. .+.+.++.+.+.+.|++
T Consensus 102 Ga~~v~~~----p~-----------~~~l~~l~~~a~~~gv~ 128 (257)
T 3lmz_A 102 GVKLIVGV----PN-----------YELLPYVDKKVKEYDFH 128 (257)
T ss_dssp TCSEEEEE----EC-----------GGGHHHHHHHHHHHTCE
T ss_pred CCCEEEec----CC-----------HHHHHHHHHHHHHcCCE
Confidence 88877764 11 13355666666666665
No 50
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=91.79 E-value=4.8 Score=33.26 Aligned_cols=71 Identities=10% Similarity=0.063 Sum_probs=52.3
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCe
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDV 167 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~ 167 (293)
.+.++..+.++.+.+.|++-+-++--. ..-.+.++.+++.+|+..+..-+ .+. .+.++...++|.+.
T Consensus 35 ~~~~~~~~~~~al~~gGv~~iel~~k~---------~~~~~~i~~l~~~~~~~~igagt--vl~--~d~~~~A~~aGAd~ 101 (225)
T 1mxs_A 35 AREEDILPLADALAAGGIRTLEVTLRS---------QHGLKAIQVLREQRPELCVGAGT--VLD--RSMFAAVEAAGAQF 101 (225)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEESSS---------THHHHHHHHHHHHCTTSEEEEEC--CCS--HHHHHHHHHHTCSS
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCC---------ccHHHHHHHHHHhCcccEEeeCe--Eee--HHHHHHHHHCCCCE
Confidence 578889999999999999988776211 23456788888887776555544 233 56788888899999
Q ss_pred eeec
Q psy2895 168 LNHN 171 (293)
Q Consensus 168 i~~~ 171 (293)
++.+
T Consensus 102 v~~p 105 (225)
T 1mxs_A 102 VVTP 105 (225)
T ss_dssp EECS
T ss_pred EEeC
Confidence 9876
No 51
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=91.73 E-value=1.8 Score=37.01 Aligned_cols=149 Identities=9% Similarity=0.123 Sum_probs=82.3
Q ss_pred hHHHHHHHHHHhhCCCcEEEEEcCCCc--CcHHHHHHHHHHcCCCeeeeccccc---------hH-HHhhcCCCCCHHHH
Q psy2895 124 SHFVSCIKHIRKLSTKIKIEILIPDFR--NQINHVLKIFKQALPDVLNHNIETV---------PR-LYKKVRPGSDYKHS 191 (293)
Q Consensus 124 ~~~~~ll~~i~~~~~~~~i~~~~~~~~--~~~~e~l~~l~~aG~~~i~~~less---------~~-~~~~i~~~~~~e~~ 191 (293)
.++.+.++.+++.....-+-..+.+.. ....+.++.|.++|+|.+.+++.-| ++ ..+.+..+.+.++.
T Consensus 3 ~ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~ 82 (267)
T 3vnd_A 3 NRYQAKFAALKAQDKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDC 82 (267)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHH
T ss_pred hHHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHH
Confidence 356777777776543322333333322 2236788888889999998873221 11 22233457789999
Q ss_pred HHHHHHHHHhCCCceeeEeEEeecCCCH-H--HHHHHHHHHHhCCCCEEEeecCCCCCC----------CccccccccCh
Q psy2895 192 LNLLKNFKKLYPNILTKSGIMVGLGEND-E--EILTVIHDMRNHNIDILTIGQYLMPSR----------LHLPVHRYLHP 258 (293)
Q Consensus 192 l~~i~~~~~~~pgi~~~~~~ivG~gEt~-e--d~~~~l~~l~~l~~~~i~i~~~~~p~~----------~~~a~~r~~~p 258 (293)
++.++.+|+..+.+++ .+| |. -++ . -+.+.++.+.+.|++.+.+. -+++.. .-+..-.++.|
T Consensus 83 ~~~v~~ir~~~~~~Pi--vlm-~Y-~npv~~~g~e~f~~~~~~aGvdgvii~-Dlp~ee~~~~~~~~~~~gl~~i~liaP 157 (267)
T 3vnd_A 83 FDIITKVRAQHPDMPI--GLL-LY-ANLVFANGIDEFYTKAQAAGVDSVLIA-DVPVEESAPFSKAAKAHGIAPIFIAPP 157 (267)
T ss_dssp HHHHHHHHHHCTTCCE--EEE-EC-HHHHHHHCHHHHHHHHHHHTCCEEEET-TSCGGGCHHHHHHHHHTTCEEECEECT
T ss_pred HHHHHHHHhcCCCCCE--EEE-ec-CcHHHHhhHHHHHHHHHHcCCCEEEeC-CCCHhhHHHHHHHHHHcCCeEEEEECC
Confidence 9999999987334442 122 21 111 0 13566777788899988773 554421 11111223344
Q ss_pred hH-HHHHHHHHHH-hcccchh
Q psy2895 259 KF-FEKFKKIAYK-LGFKNVL 277 (293)
Q Consensus 259 ~~-~~~~~~~~~~-~G~~~~~ 277 (293)
.. .++++..+.. -||-++.
T Consensus 158 ~t~~eri~~i~~~~~gfvY~v 178 (267)
T 3vnd_A 158 NADADTLKMVSEQGEGYTYLL 178 (267)
T ss_dssp TCCHHHHHHHHHHCCSCEEES
T ss_pred CCCHHHHHHHHHhCCCcEEEE
Confidence 32 4566655554 3676653
No 52
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=91.71 E-value=0.81 Score=41.97 Aligned_cols=136 Identities=11% Similarity=0.052 Sum_probs=70.9
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecC-CC---CC-CCChhHHHHHHHHHHhh---CC-CcEEEEEcCCCcCcHHHHHH
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNR-DD---LH-DGGSSHFVSCIKHIRKL---ST-KIKIEILIPDFRNQINHVLK 158 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~-~~---l~-~~~~~~~~~ll~~i~~~---~~-~~~i~~~~~~~~~~~~e~l~ 158 (293)
.+.+++++.++++.+.|+.-|-+.|... |. .+ ..+..++..+++.+++. .+ ++.|.+=| .. .++++
T Consensus 209 ~~~~~al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT---~~--~~Vae 283 (442)
T 3mcm_A 209 FDDNQRKLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANLIYKPLVSIDT---RK--LEVMQ 283 (442)
T ss_dssp SCCCHHHHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEEEEC---CC--HHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeC---CC--HHHHH
Confidence 6789999999999999999887765321 11 10 01245566678888762 22 44555533 33 55666
Q ss_pred HHHH--cCCCe-ee-eccccchHHHhhc----------C-CCC--C-------------HHHHHHHHHHHHHhCCCc---
Q psy2895 159 IFKQ--ALPDV-LN-HNIETVPRLYKKV----------R-PGS--D-------------YKHSLNLLKNFKKLYPNI--- 205 (293)
Q Consensus 159 ~l~~--aG~~~-i~-~~less~~~~~~i----------~-~~~--~-------------~e~~l~~i~~~~~~~pgi--- 205 (293)
+--+ +|.+. |+ ++....+++++.+ + ++. + .+...+.++.+.++ |+
T Consensus 284 aAL~~~aGa~i~INDVsg~~d~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~y~dvv~ev~~~l~~~i~~a~~a--GI~~~ 361 (442)
T 3mcm_A 284 KILAKHHDIIWMINDVECNNIEQKAQLIAKYNKKYVIIHNLGITDRNQYLDKENAIDNVCDYIEQKKQILLKH--GIAQQ 361 (442)
T ss_dssp HHHHHHGGGCCEEEECCCTTHHHHHHHHHHHTCEEEEECC----------------CTHHHHHHHHHHHHHHH--TCCGG
T ss_pred HHHhhCCCCCEEEEcCCCCCChHHHHHHHHhCCeEEEECCCCCCccccccCcccHHHHHHHHHHHHHHHHHHc--CCCHH
Confidence 6555 78777 53 3332234444322 1 111 1 23345667888888 98
Q ss_pred eeeEeEEeecCCCHHHHHHHHHHHH
Q psy2895 206 LTKSGIMVGLGENDEEILTVIHDMR 230 (293)
Q Consensus 206 ~~~~~~ivG~gEt~ed~~~~l~~l~ 230 (293)
.+-.|=-+|||.|.++=.++++.+.
T Consensus 362 ~IilDPGiGF~Kt~~~nl~lL~~l~ 386 (442)
T 3mcm_A 362 NIYFDIGFGFGKKSDTARYLLENII 386 (442)
T ss_dssp GEEEECCCC------------CCHH
T ss_pred HEEEeCCCCCCCCHHHHHHHHHHHH
Confidence 3555655677777666555554443
No 53
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=91.48 E-value=5.1 Score=32.95 Aligned_cols=119 Identities=12% Similarity=0.071 Sum_probs=79.0
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCC
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALP 165 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~ 165 (293)
+..++++....++.+.+-|++-+-++.-.+ .-.+.++.+++.+|+.-|-.-| .++ .+.++...++|.
T Consensus 20 r~~~~~~a~~~a~al~~gGi~~iEvt~~t~---------~a~~~I~~l~~~~p~~~IGAGT--Vlt--~~~a~~ai~AGA 86 (217)
T 3lab_A 20 VIDDLVHAIPMAKALVAGGVHLLEVTLRTE---------AGLAAISAIKKAVPEAIVGAGT--VCT--ADDFQKAIDAGA 86 (217)
T ss_dssp CCSCGGGHHHHHHHHHHTTCCEEEEETTST---------THHHHHHHHHHHCTTSEEEEEC--CCS--HHHHHHHHHHTC
T ss_pred EcCCHHHHHHHHHHHHHcCCCEEEEeCCCc---------cHHHHHHHHHHHCCCCeEeecc--ccC--HHHHHHHHHcCC
Confidence 346799999999999999999887764321 3457888898888875444432 344 788999999999
Q ss_pred CeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCc--eeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEeec
Q psy2895 166 DVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNI--LTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQ 241 (293)
Q Consensus 166 ~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi--~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~~ 241 (293)
+.+--+ +.+. +.++.+++. |+ +-..-+|.|. -|++|+... .+.|.+.+.++|
T Consensus 87 ~fivsP-------------~~~~----evi~~~~~~--~v~~~~~~~~~PG~-~TptE~~~A----~~~Gad~vK~FP 140 (217)
T 3lab_A 87 QFIVSP-------------GLTP----ELIEKAKQV--KLDGQWQGVFLPGV-ATASEVMIA----AQAGITQLKCFP 140 (217)
T ss_dssp SEEEES-------------SCCH----HHHHHHHHH--HHHCSCCCEEEEEE-CSHHHHHHH----HHTTCCEEEETT
T ss_pred CEEEeC-------------CCcH----HHHHHHHHc--CCCccCCCeEeCCC-CCHHHHHHH----HHcCCCEEEECc
Confidence 876432 2122 455667776 66 0011234453 577776554 568999887753
No 54
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=91.44 E-value=3.3 Score=34.96 Aligned_cols=125 Identities=10% Similarity=0.061 Sum_probs=79.1
Q ss_pred hhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcCcHHHHHHHHHHcCCCee
Q psy2895 90 IEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRNQINHVLKIFKQALPDVL 168 (293)
Q Consensus 90 ~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~~~~e~l~~l~~aG~~~i 168 (293)
.+.+.+.++.+.+.|+..++|..-+++ ...+.+...++++... +..+++... |...+..+.++.|.+.|+++|
T Consensus 72 ~~~M~~Di~~~~~~GadGvV~G~Lt~d--g~iD~~~~~~Li~~a~----~~~vTFHRAfD~~~d~~~ale~L~~lG~~rI 145 (256)
T 1twd_A 72 FAAILEDVRTVRELGFPGLVTGVLDVD--GNVDMPRMEKIMAAAG----PLAVTFHRAFDMCANPLYTLNNLAELGIARV 145 (256)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCBCTT--SSBCHHHHHHHHHHHT----TSEEEECGGGGGCSCHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeECCC--CCcCHHHHHHHHHHhC----CCcEEEECchhccCCHHHHHHHHHHcCCCEE
Confidence 344566777788899999988665532 1234567777776554 357777654 555555778999999999997
Q ss_pred ee-ccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 169 NH-NIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 169 ~~-~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
-= |.+. +..+-++.++.+.+.. + ...+|.|-|=+.+.+.+.+ +.|+..++.+
T Consensus 146 LTSG~~~------------~a~~g~~~L~~Lv~~a-~---~i~Im~GgGv~~~Ni~~l~----~tGv~e~H~S 198 (256)
T 1twd_A 146 LTSGQKS------------DALQGLSKIMELIAHR-D---APIIMAGAGVRAENLHHFL----DAGVLEVHSS 198 (256)
T ss_dssp EECTTSS------------STTTTHHHHHHHHTSS-S---CCEEEEESSCCTTTHHHHH----HHTCSEEEEC
T ss_pred ECCCCCC------------CHHHHHHHHHHHHHhh-C---CcEEEecCCcCHHHHHHHH----HcCCCeEeEC
Confidence 53 2211 2222334455554431 3 4578888877777666543 5788887764
No 55
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=91.03 E-value=2.7 Score=39.39 Aligned_cols=133 Identities=15% Similarity=0.030 Sum_probs=89.4
Q ss_pred hHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeee
Q psy2895 91 EEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNH 170 (293)
Q Consensus 91 eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~ 170 (293)
++-.+.+..|.+.|+..|++-.-+. ....+.+.++.|++.+|++.|-.-. ..+ .+..+.|.++|+|.+.+
T Consensus 280 ~d~~eR~~aLv~AGvD~iviD~ahG------hs~~v~~~i~~ik~~~p~~~viaGN--VaT--~e~a~~Li~aGAD~vkV 349 (556)
T 4af0_A 280 PGDKDRLKLLAEAGLDVVVLDSSQG------NSVYQIEFIKWIKQTYPKIDVIAGN--VVT--REQAAQLIAAGADGLRI 349 (556)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCSCC------CSHHHHHHHHHHHHHCTTSEEEEEE--ECS--HHHHHHHHHHTCSEEEE
T ss_pred ccHHHHHHHHHhcCCcEEEEecccc------ccHHHHHHHHHHHhhCCcceEEecc--ccC--HHHHHHHHHcCCCEEee
Confidence 4567788899999999988865443 2468899999999999876654422 233 77888999999999998
Q ss_pred cccc-c---hHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEeecCC
Q psy2895 171 NIET-V---PRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYL 243 (293)
Q Consensus 171 ~les-s---~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~~~~ 243 (293)
++-. | -++-..+..+ ..--+.++.+.+++. |+++.++-= -.+..|+... -..|.+.+-+..++
T Consensus 350 GiGpGSiCtTr~v~GvG~P-Q~tAi~~~a~~a~~~--~vpvIADGG---I~~sGDi~KA----laaGAd~VMlGsll 416 (556)
T 4af0_A 350 GMGSGSICITQEVMAVGRP-QGTAVYAVAEFASRF--GIPCIADGG---IGNIGHIAKA----LALGASAVMMGGLL 416 (556)
T ss_dssp CSSCSTTBCCTTTCCSCCC-HHHHHHHHHHHHGGG--TCCEEEESC---CCSHHHHHHH----HHTTCSEEEESTTT
T ss_pred cCCCCcccccccccCCCCc-HHHHHHHHHHHHHHc--CCCEEecCC---cCcchHHHHH----hhcCCCEEEEchhh
Confidence 7644 3 1222122211 355677888888888 887655421 2455555444 44788888776444
No 56
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=90.56 E-value=6.9 Score=33.71 Aligned_cols=123 Identities=9% Similarity=-0.053 Sum_probs=72.6
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCC---cEEEEEc-C--CCcCcHHHHHHHHH
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTK---IKIEILI-P--DFRNQINHVLKIFK 161 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~---~~i~~~~-~--~~~~~~~e~l~~l~ 161 (293)
.+++.+.+.++.+.+.|+..|.|.--.. ...+..+.++++.+++..|+ +.+.+.. + |+.. .-.+..+
T Consensus 147 ~~~~~~~~~~~~~~~~G~~~i~l~DT~G----~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~--AN~laA~- 219 (293)
T 3ewb_X 147 SDRAFLIEAVQTAIDAGATVINIPDTVG----YTNPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMAT--ANALAAI- 219 (293)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECSSS----CCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCHH--HHHHHHH-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCC----CCCHHHHHHHHHHHHHhcCCccCceEEEEeCCCcChHH--HHHHHHH-
Confidence 5678888888888888888877743221 12256788888888887764 3455543 2 3322 4456666
Q ss_pred HcCCCeeeecccc-chHHHhhcCCCCCHHHHHHHHHHHH-HhCCCceeeEeEEeecCCCHHHHHHHHHHHHhC
Q psy2895 162 QALPDVLNHNIET-VPRLYKKVRPGSDYKHSLNLLKNFK-KLYPNILTKSGIMVGLGENDEEILTVIHDMRNH 232 (293)
Q Consensus 162 ~aG~~~i~~~les-s~~~~~~i~~~~~~e~~l~~i~~~~-~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l 232 (293)
++|++.+..++-+ .+ -..+-+.++++-.++.-. .. |+.+ |-..+.+.++.+++.++
T Consensus 220 ~aGa~~vd~sv~GlGe-----raGN~~~E~vv~~L~~~~~~~--g~~t--------gidl~~L~~~s~~v~~~ 277 (293)
T 3ewb_X 220 ENGARRVEGTINGIGE-----RAGNTALEEVAVALHIRKDFY--QAET--------NIVLNQFKNSSDLISRL 277 (293)
T ss_dssp HTTCCEEEEBGGGCCT-----TTCBCBHHHHHHHHHHTHHHH--CEEE--------CCCGGGHHHHHHHHHHC
T ss_pred HhCCCEEEeecccccc-----ccccHhHHHHHHHHHhhhhhc--CCCC--------CCCHHHHHHHHHHHHHH
Confidence 4799888877655 22 011235666666554321 23 5433 23345566666666553
No 57
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=90.08 E-value=3 Score=35.98 Aligned_cols=124 Identities=10% Similarity=0.070 Sum_probs=78.3
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEc-C--CCcCcHHHHHHHHHHcC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILI-P--DFRNQINHVLKIFKQAL 164 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~-~--~~~~~~~e~l~~l~~aG 164 (293)
.+++.+.+.++.+.+.|+..|.|.--.. ...+..+.++++.+++..|++.+.+.. + |+.. ...+..+ ++|
T Consensus 153 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G----~~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~--An~laA~-~aG 225 (298)
T 2cw6_A 153 ISPAKVAEVTKKFYSMGCYEISLGDTIG----VGTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQAL--ANTLMAL-QMG 225 (298)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEETTS----CCCHHHHHHHHHHHHHHSCGGGEEEEEBCTTSCHH--HHHHHHH-HTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCC----CcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHH--HHHHHHH-HhC
Confidence 5789999999999999999988752221 123578999999999888765565543 2 3322 3456666 589
Q ss_pred CCeeeeccccc-hHHHhhcCC-CCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHh
Q psy2895 165 PDVLNHNIETV-PRLYKKVRP-GSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRN 231 (293)
Q Consensus 165 ~~~i~~~less-~~~~~~i~~-~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~ 231 (293)
++.+...+-+. +-=|..-+. +-..|+.+..++ .. |+.+ |-..+.+.+..+++.+
T Consensus 226 a~~vd~tv~GlG~cp~a~g~aGN~~~E~lv~~l~---~~--g~~~--------~idl~~l~~~~~~~~~ 281 (298)
T 2cw6_A 226 VSVVDSSVAGLGGCPYAQGASGNLATEDLVYMLE---GL--GIHT--------GVNLQKLLEAGNFICQ 281 (298)
T ss_dssp CCEEEEBTTSCCCCTTSCSSCCBCBHHHHHHHHH---HH--TCBC--------CCCHHHHHHHHHHHHH
T ss_pred CCEEEeecccccCCCCCCCCcCChhHHHHHHHHH---hc--CCCC--------CcCHHHHHHHHHHHHH
Confidence 99998766552 211111111 225566666554 34 6543 3355677777777655
No 58
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=90.06 E-value=2 Score=37.64 Aligned_cols=138 Identities=18% Similarity=0.265 Sum_probs=76.7
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecCC-CCCCCChhHH--HHHHHHHHhhCCCcEEEEEcCCCc---CcHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNRD-DLHDGGSSHF--VSCIKHIRKLSTKIKIEILIPDFR---NQINHVLKI 159 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~-~l~~~~~~~~--~~ll~~i~~~~~~~~i~~~~~~~~---~~~~e~l~~ 159 (293)
..++.++.+++++.+.+.|+..|-++....| ...+. ...+ .+.++.|++ .|+..+.++.++.. .++.+....
T Consensus 19 ~~~~~~~k~~ia~~L~~aGv~~IEvg~~~~p~~~f~~-~~~~~~~e~l~~i~~-~~~~~~~~L~r~~~~~~~dv~~~~~a 96 (320)
T 3dxi_A 19 WDFNSKIVDAYILAMNELPIDYLEVGYRNKPSKEYMG-KFGYTPVSVLKHLRN-ISTKKIAIMLNEKNTTPEDLNHLLLP 96 (320)
T ss_dssp TCCCHHHHHHHHHHHHTTTCCEEEEEECCSCCSSCCC-HHHHCCHHHHHHHHH-HCCSEEEEEEEGGGCCGGGHHHHHGG
T ss_pred CcCCHHHHHHHHHHHHHhCCCEEEEecccCCcccccc-ccccChHHHHHHHhh-ccCCeEEEEecCCCCChhhHHHHHHh
Confidence 3589999999999999999998866643211 10010 0111 245566655 36777777664211 122222222
Q ss_pred HHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCC-CHHHHHHHHHHHHhCCCCEEE
Q psy2895 160 FKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGE-NDEEILTVIHDMRNHNIDILT 238 (293)
Q Consensus 160 l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gE-t~ed~~~~l~~l~~l~~~~i~ 238 (293)
.++|++.+.+... .++.+...+.++.+++. |+.+...+...-+- +.+++.+.+..+ +.|++.+.
T Consensus 97 -~~~Gvd~~ri~~~-----------~~nle~~~~~v~~ak~~--G~~v~~~~~~~~~~~~~~~~l~~~~~~-~~G~~~i~ 161 (320)
T 3dxi_A 97 -IIGLVDMIRIAID-----------PQNIDRAIVLAKAIKTM--GFEVGFNVMYMSKWAEMNGFLSKLKAI-DKIADLFC 161 (320)
T ss_dssp -GTTTCSEEEEEEC-----------GGGHHHHHHHHHHHHTT--TCEEEEEECCTTTGGGSTTSGGGGGGG-TTTCSEEE
T ss_pred -hhcCCCEEEEEec-----------HHHHHHHHHHHHHHHHC--CCEEEEEEEeCCCCCCHHHHHHHHHHh-hCCCCEEE
Confidence 3478888776521 11477778888888888 88765544432122 122233333222 45777776
Q ss_pred ee
Q psy2895 239 IG 240 (293)
Q Consensus 239 i~ 240 (293)
+.
T Consensus 162 l~ 163 (320)
T 3dxi_A 162 MV 163 (320)
T ss_dssp EE
T ss_pred EC
Confidence 63
No 59
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=89.97 E-value=3 Score=35.67 Aligned_cols=117 Identities=8% Similarity=0.061 Sum_probs=66.5
Q ss_pred HHHHHHHHHHhhCCCcEEEEEcCCCc--CcHHHHHHHHHHcCCCeeeeccccc----------hHHHhhcCCCCCHHHHH
Q psy2895 125 HFVSCIKHIRKLSTKIKIEILIPDFR--NQINHVLKIFKQALPDVLNHNIETV----------PRLYKKVRPGSDYKHSL 192 (293)
Q Consensus 125 ~~~~ll~~i~~~~~~~~i~~~~~~~~--~~~~e~l~~l~~aG~~~i~~~less----------~~~~~~i~~~~~~e~~l 192 (293)
++.+.++.+++.....-+-..+.|.. +...+.++.|.++|+|.+.+++.-| ....+.+..+.+.++.+
T Consensus 6 ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~ 85 (271)
T 3nav_A 6 RYQALFQRLSAAQQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICF 85 (271)
T ss_dssp HHHHHHHHHHHTTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHH
Confidence 56677777766542222333343322 1125677778888888887764321 11222344567888999
Q ss_pred HHHHHHHHhCCCceeeEeEEeecCCCHH--HHHHHHHHHHhCCCCEEEeecCCCC
Q psy2895 193 NLLKNFKKLYPNILTKSGIMVGLGENDE--EILTVIHDMRNHNIDILTIGQYLMP 245 (293)
Q Consensus 193 ~~i~~~~~~~pgi~~~~~~ivG~gEt~e--d~~~~l~~l~~l~~~~i~i~~~~~p 245 (293)
+.++.+|+..+.+++. + .|.-.... -+.+.++.+.+.|++.+-+. =+++
T Consensus 86 ~~v~~~r~~~~~~Piv--l-m~Y~n~v~~~g~~~f~~~~~~aGvdGvIip-Dlp~ 136 (271)
T 3nav_A 86 ELIAQIRARNPETPIG--L-LMYANLVYARGIDDFYQRCQKAGVDSVLIA-DVPT 136 (271)
T ss_dssp HHHHHHHHHCTTSCEE--E-EECHHHHHHTCHHHHHHHHHHHTCCEEEET-TSCG
T ss_pred HHHHHHHhcCCCCCEE--E-EecCcHHHHHhHHHHHHHHHHCCCCEEEEC-CCCH
Confidence 9999998873455442 1 12211011 13556777788899987663 4444
No 60
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=89.82 E-value=6.6 Score=32.53 Aligned_cols=117 Identities=10% Similarity=0.067 Sum_probs=74.4
Q ss_pred cEEEEEcCCCc-CcHHHHHHHHHHcCCCeeeeccccc-hHHHh-hc-CCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec
Q psy2895 140 IKIEILIPDFR-NQINHVLKIFKQALPDVLNHNIETV-PRLYK-KV-RPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL 215 (293)
Q Consensus 140 ~~i~~~~~~~~-~~~~e~l~~l~~aG~~~i~~~less-~~~~~-~i-~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~ 215 (293)
+.+.+.+-.+. ..+.+.++.++++|.+.+.+..... ..-+. .. ....+.++..+.-+.+.+. |+.+.+.- ...
T Consensus 10 mklg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~i~~~~-~~~ 86 (262)
T 3p6l_A 10 WRLGMQSYSFHLFPLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASK--GIKIVGTG-VYV 86 (262)
T ss_dssp EEEEEEGGGGTTSCHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHT--TCEEEEEE-EEC
T ss_pred cEEEEEecccCCCCHHHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHc--CCeEEEEe-ccC
Confidence 45555442111 1247899999999999998865431 11111 01 1233566666777778888 99765432 223
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEEeecCCCCCCCccccccccChhHHHHHHHHHHHhccc
Q psy2895 216 GENDEEILTVIHDMRNHNIDILTIGQYLMPSRLHLPVHRYLHPKFFEKFKKIAYKLGFK 274 (293)
Q Consensus 216 gEt~ed~~~~l~~l~~l~~~~i~i~~~~~p~~~~~a~~r~~~p~~~~~~~~~~~~~G~~ 274 (293)
..+.+++...++.+.++|...+.+. |. .+.+..+.+.+.+.|++
T Consensus 87 ~~~~~~~~~~i~~A~~lGa~~v~~~----~~-----------~~~~~~l~~~a~~~gv~ 130 (262)
T 3p6l_A 87 AEKSSDWEKMFKFAKAMDLEFITCE----PA-----------LSDWDLVEKLSKQYNIK 130 (262)
T ss_dssp CSSTTHHHHHHHHHHHTTCSEEEEC----CC-----------GGGHHHHHHHHHHHTCE
T ss_pred CccHHHHHHHHHHHHHcCCCEEEec----CC-----------HHHHHHHHHHHHHhCCE
Confidence 5677889999999999999998874 21 13356667777777775
No 61
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=89.75 E-value=2.2 Score=37.17 Aligned_cols=124 Identities=9% Similarity=0.096 Sum_probs=74.3
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEc-C--CCcCcHHHHHHHHHHcC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILI-P--DFRNQINHVLKIFKQAL 164 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~-~--~~~~~~~e~l~~l~~aG 164 (293)
.+++.+.+.++.+.+.|+..|.|.--.. ...+..+.++++.+++..|++.+.+.. + |+.. ...+..+ ++|
T Consensus 154 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G----~~~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~Gla~--AN~laAv-~aG 226 (307)
T 1ydo_A 154 VPIEQVIRLSEALFEFGISELSLGDTIG----AANPAQVETVLEALLARFPANQIALHFHDTRGTAL--ANMVTAL-QMG 226 (307)
T ss_dssp CCHHHHHHHHHHHHHHTCSCEEEECSSC----CCCHHHHHHHHHHHHTTSCGGGEEEECBGGGSCHH--HHHHHHH-HHT
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEcCCCC----CcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHH--HHHHHHH-HhC
Confidence 5788999999999999999887752211 123578889999998887766666654 2 3332 4466666 579
Q ss_pred CCeeeecccc-chHHHhhcC-CCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHh
Q psy2895 165 PDVLNHNIET-VPRLYKKVR-PGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRN 231 (293)
Q Consensus 165 ~~~i~~~les-s~~~~~~i~-~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~ 231 (293)
++.+...+-+ -+--|..=+ .+-+.|+.+..++ .. |+.+ |-..+.+.+..+++.+
T Consensus 227 a~~vd~tv~GlGecp~a~graGN~~~E~lv~~L~---~~--g~~t--------~idl~~L~~~~~~v~~ 282 (307)
T 1ydo_A 227 ITVFDGSAGGLGGCPYAPGSSGNAATEDIVYMLE---QM--DIKT--------NVKLEKLLSAAKWIEE 282 (307)
T ss_dssp CCEEEEBGGGCCEETTEEEEECBCBHHHHHHHHH---HT--TCBC--------CCCHHHHHHHHHHHHH
T ss_pred CCEEEEcccccCCCCCCCCCCCChhHHHHHHHHH---hc--CCCC--------CcCHHHHHHHHHHHHH
Confidence 9998876654 120111001 1224555554443 34 5543 3345666666666654
No 62
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=89.70 E-value=2.9 Score=36.85 Aligned_cols=120 Identities=11% Similarity=0.026 Sum_probs=75.7
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEc-C--CCcCcHHHHHHHHHHcC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILI-P--DFRNQINHVLKIFKQAL 164 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~-~--~~~~~~~e~l~~l~~aG 164 (293)
.+++.+.+.++.+.+.|+..|.|.--.. ...+..+.++++.+++..|++.|.+.. + |+.. .-.+..+ ++|
T Consensus 166 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G----~~~P~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~--AN~laAv-~aG 238 (337)
T 3ble_A 166 NSPDYVKSLVEHLSKEHIERIFLPDTLG----VLSPEETFQGVDSLIQKYPDIHFEFHGHNDYDLSV--ANSLQAI-RAG 238 (337)
T ss_dssp HCHHHHHHHHHHHHTSCCSEEEEECTTC----CCCHHHHHHHHHHHHHHCTTSCEEEECBCTTSCHH--HHHHHHH-HTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCC----CcCHHHHHHHHHHHHHhcCCCeEEEEecCCcchHH--HHHHHHH-HhC
Confidence 4688899999999999999888742111 112578889999999888766677654 2 3322 4566666 589
Q ss_pred CCeeeecccc-chHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHh
Q psy2895 165 PDVLNHNIET-VPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRN 231 (293)
Q Consensus 165 ~~~i~~~les-s~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~ 231 (293)
++.+..++-+ .+ -...-+.++.+-.++.. . |+.+ |-..+.+.+..+++.+
T Consensus 239 a~~vd~tv~GlG~-----~aGN~~~E~lv~~L~~~--~--g~~t--------gidl~~L~~~~~~v~~ 289 (337)
T 3ble_A 239 VKGLHASINGLGE-----RAGNTPLEALVTTIHDK--S--NSKT--------NINEIAITEASRLVEV 289 (337)
T ss_dssp CSEEEEBGGGCSS-----TTCBCBHHHHHHHHHHH--S--SCCC--------CCCGGGHHHHHHHHHH
T ss_pred CCEEEEecccccc-----cccchhHHHHHHHHHHh--c--CCCC--------CcCHHHHHHHHHHHHH
Confidence 9999877655 22 01123667766665543 2 4322 2244556666666655
No 63
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=89.44 E-value=4.2 Score=39.09 Aligned_cols=140 Identities=9% Similarity=0.079 Sum_probs=81.6
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhC---CCcEEEEEcCCCcCcHHHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLS---TKIKIEILIPDFRNQINHVLKIFKQ 162 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~---~~~~i~~~~~~~~~~~~e~l~~l~~ 162 (293)
..++.++-+++++.|.+.|+++|-.+ .| ... ...+ +.++.|.+.. ++..+.++++....+++..++.++.
T Consensus 88 ~~~s~eeKl~Ia~~L~~lGVd~IEaG--fP-~as---p~D~-e~v~~i~~~~l~~~~~~i~aL~r~~~~did~a~eal~~ 160 (644)
T 3hq1_A 88 DPMSPARKRRMFDLLVRMGYKEIEVG--FP-SAS---QTDF-DFVREIIEQGAIPDDVTIQVLTQCRPELIERTFQACSG 160 (644)
T ss_dssp SCCCHHHHHHHHHHHHHHTCSEEEEE--CT-TTC---HHHH-HHHHHHHHTTCSCTTCEEEEEEESCHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEe--CC-CCC---hhHH-HHHHHHHhcCCCCCCeEEEEEecCCHhhHHHHHHHHhc
Confidence 36899999999999999999987643 33 221 2232 3455565542 2556666654211112445667778
Q ss_pred cCCCeeeeccccchHHHhhcCCCCCHHHHHHHH----HHHHHhCCCce---eeEeEEeec----CCCHHHHHHHHHHHHh
Q psy2895 163 ALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLL----KNFKKLYPNIL---TKSGIMVGL----GENDEEILTVIHDMRN 231 (293)
Q Consensus 163 aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i----~~~~~~~pgi~---~~~~~ivG~----gEt~ed~~~~l~~l~~ 231 (293)
++.+.+++.+-+|+-..+. .-+.+.++.++.+ +.+++. +-. +..++.++- .-..+.+.+.++.+.+
T Consensus 161 a~~~~Vhif~stSd~h~~~-~l~~s~eevle~~~~~v~~a~~~--~~~~~~~~~~v~fs~Edasrtd~dfl~ev~~aa~e 237 (644)
T 3hq1_A 161 APRAIVHFYNSTSILQRRV-VFRANRAEVQAIATDGARKCVEQ--AAKYPGTQWRFEYSPESYTGTELEYAKQVCDAVGE 237 (644)
T ss_dssp CSEEEEEEEEECCHHHHHH-TTCCCHHHHHHHHHHHHHHHHHH--HHHSCSSEEEEEEEEETGGGSCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEecCCHHHHHH-HhCCCHHHHHHHHHHHHHHHHHH--hhhccCceEEEEEcCcccCCCCHHHHHHHHHHHHH
Confidence 8988898876666543332 2244666666544 444454 321 122233321 2356667788888877
Q ss_pred C---CCC
Q psy2895 232 H---NID 235 (293)
Q Consensus 232 l---~~~ 235 (293)
. |++
T Consensus 238 aG~~Gad 244 (644)
T 3hq1_A 238 VIAPTPE 244 (644)
T ss_dssp HHCCCSS
T ss_pred hcCCCCC
Confidence 5 455
No 64
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=89.38 E-value=6.9 Score=34.13 Aligned_cols=139 Identities=18% Similarity=0.131 Sum_probs=83.0
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeec-CCCCC----CCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVN-RDDLH----DGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIF 160 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~-~~~l~----~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l 160 (293)
+..+.+.+++.++++.+.|+.-|-+.|.. .|... ..+.+++..+++.|++.. ++.|.+=| .. .++++.-
T Consensus 28 ~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~-~vpiSIDT---~~--~~Va~aA 101 (314)
T 2vef_A 28 QFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKES-DVLISIDT---WK--SQVAEAA 101 (314)
T ss_dssp --CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHC-CCEEEEEC---SC--HHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhC-CceEEEeC---CC--HHHHHHH
Confidence 45689999999999999999988876632 11110 123567788888888753 44555533 33 5666666
Q ss_pred HHcCCCeee-ecccc-chHHHhh----------cC-C----CCC---------------------------HHH-----H
Q psy2895 161 KQALPDVLN-HNIET-VPRLYKK----------VR-P----GSD---------------------------YKH-----S 191 (293)
Q Consensus 161 ~~aG~~~i~-~~les-s~~~~~~----------i~-~----~~~---------------------------~e~-----~ 191 (293)
-++|.+.|+ ++... .+++++. |+ + +.+ .++ .
T Consensus 102 l~aGa~iINDVsg~~~d~~m~~v~a~~~~~vvlmh~~~~g~p~~~~~~~~~~~~~g~~~~~~~~~~y~d~~v~e~v~~~l 181 (314)
T 2vef_A 102 LAAGADLVNDITGLMGDEKMPHVVAEARAQVVIMFNPVMARPQHPSSLIFPHFGFGQAFTEEELADFETLPIEELMEAFF 181 (314)
T ss_dssp HHTTCCEEEETTTTCSCTTHHHHHHHHTCEEEEECCHHHHCTTSTTTTTSCCCCC--CCCC--CHHHHHSCHHHHHHHHH
T ss_pred HHcCCCEEEECCCCCCChHHHHHHHHcCCCEEEEecCCCCCCCCcccccccccccccccccccccccccchHHHHHHHHH
Confidence 667887775 43321 1222221 11 0 001 222 2
Q ss_pred HHHHHHHHHhCCCce---eeEeEEeecCCCHHHHHHHHHHHHhC
Q psy2895 192 LNLLKNFKKLYPNIL---TKSGIMVGLGENDEEILTVIHDMRNH 232 (293)
Q Consensus 192 l~~i~~~~~~~pgi~---~~~~~ivG~gEt~ed~~~~l~~l~~l 232 (293)
.+.++.+.++ |+. +-.+=-+|||-|.++-.++++.++++
T Consensus 182 ~~~i~~a~~~--GI~~~~IilDPGiGF~kt~~~nl~ll~~l~~l 223 (314)
T 2vef_A 182 ERALARAAEA--GIAPENILLDPGIGFGLTKKENLLLLRDLDKL 223 (314)
T ss_dssp HHHHHHHHHH--TCCGGGEEEECCTTSSCCHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHc--CCChhhEEEeCCCCcccchHHHHHHHHHHHHh
Confidence 3456778888 983 55665567888888777777766654
No 65
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=89.25 E-value=6.3 Score=34.52 Aligned_cols=124 Identities=12% Similarity=0.071 Sum_probs=77.7
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCC---cEEEEEc-CCCcCcHHHHHHHHHHc
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTK---IKIEILI-PDFRNQINHVLKIFKQA 163 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~---~~i~~~~-~~~~~~~~e~l~~l~~a 163 (293)
.+++.+.+.++.+.+.|+..|.|..-.. ...+..+.++++.+++..|+ +.+.+.. +++.--+.-.+..+ ++
T Consensus 148 ~~~~~~~~~~~~~~~~G~~~i~l~DT~G----~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA~-~a 222 (325)
T 3eeg_A 148 ADQAFLARMVEAVIEAGADVVNIPDTTG----YMLPWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAAL-QN 222 (325)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEECCBSSS----CCCHHHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHHH-HH
T ss_pred chHHHHHHHHHHHHhcCCCEEEecCccC----CcCHHHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHHH-Hh
Confidence 5788899999999999999887742221 12256788999999988775 5676654 22211114466666 47
Q ss_pred CCCeeeecccc-chHHHhhcCCCCCHHHHHHHHHHHHH-hCCCceeeEeEEeecCCCHHHHHHHHHHHHh
Q psy2895 164 LPDVLNHNIET-VPRLYKKVRPGSDYKHSLNLLKNFKK-LYPNILTKSGIMVGLGENDEEILTVIHDMRN 231 (293)
Q Consensus 164 G~~~i~~~les-s~~~~~~i~~~~~~e~~l~~i~~~~~-~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~ 231 (293)
|++.+...+-+ .+ -...-+.++.+-.++.... . |+.+ |-..+.+.+..+++.+
T Consensus 223 Ga~~vd~tv~GlGe-----r~GN~~lE~vv~~L~~~~~~~--g~~t--------gidl~~L~~~s~~v~~ 277 (325)
T 3eeg_A 223 GARQVECTINGIGE-----RAGNTALEEVVMAMECHKETL--GLET--------GINHKKLVPISHLVST 277 (325)
T ss_dssp TCCEEEEBGGGCCS-----TTCCCBHHHHHHHHHHTHHHH--CEEC--------CCCGGGHHHHHHHHHH
T ss_pred CCCEEEEecccccc-----cccchhHHHHHHHHHhhhhcc--CCCC--------CcCHHHHHHHHHHHHH
Confidence 99999887765 23 1123367777776654332 4 5433 3344566677776655
No 66
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=89.00 E-value=8.7 Score=32.90 Aligned_cols=80 Identities=5% Similarity=0.025 Sum_probs=38.0
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEc-C--CCcCcHHHHHHHHHHcC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILI-P--DFRNQINHVLKIFKQAL 164 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~-~--~~~~~~~e~l~~l~~aG 164 (293)
.+++++.+.++.+.+.|+..+.+.--.. ...+..+.++++.+++..|++.+.+.. + |+.. ...+..+ ++|
T Consensus 152 ~~~~~~~~~~~~~~~~G~d~i~l~Dt~G----~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~--an~l~Ai-~aG 224 (295)
T 1ydn_A 152 VTPQAVASVTEQLFSLGCHEVSLGDTIG----RGTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRAL--DNIRVSL-EKG 224 (295)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEETTS----CCCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHH--HHHHHHH-HHT
T ss_pred CCHHHHHHHHHHHHhcCCCEEEecCCCC----CcCHHHHHHHHHHHHHhCCCCeEEEEECCCcchHH--HHHHHHH-HhC
Confidence 3466666666666666666655541111 112345566666666555433333322 1 2221 2333333 356
Q ss_pred CCeeeecccc
Q psy2895 165 PDVLNHNIET 174 (293)
Q Consensus 165 ~~~i~~~les 174 (293)
++.+..++-+
T Consensus 225 ~~~vd~sv~G 234 (295)
T 1ydn_A 225 LRVFDASVGG 234 (295)
T ss_dssp CCEEEEBTTC
T ss_pred CCEEEecccc
Confidence 6666655433
No 67
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=88.72 E-value=10 Score=32.09 Aligned_cols=134 Identities=10% Similarity=0.065 Sum_probs=78.7
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHc--C
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQA--L 164 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~a--G 164 (293)
..+.+.+++.++++.+.|+.-|-+.||..+ . ...+.+..++..+.+.. ++.+.+=| .. .+.++.--++ |
T Consensus 21 ~~~~~~a~~~a~~~v~~GAdiIDIg~g~~~-v--~~~ee~~rvv~~i~~~~-~~pisIDT---~~--~~v~~aAl~a~~G 91 (262)
T 1f6y_A 21 ERDPAPVQEWARRQEEGGARALDLNVGPAV-Q--DKVSAMEWLVEVTQEVS-NLTLCLDS---TN--IKAIEAGLKKCKN 91 (262)
T ss_dssp HTCHHHHHHHHHHHHHHTCSEEEEBCC-------CHHHHHHHHHHHHHTTC-CSEEEEEC---SC--HHHHHHHHHHCSS
T ss_pred cCCHHHHHHHHHHHHHCCCcEEEECCCCCC-C--ChHHHHHHHHHHHHHhC-CCeEEEeC---CC--HHHHHHHHhhCCC
Confidence 467899999999999999999988876431 1 23466777777777642 44555533 23 5566655555 7
Q ss_pred CCeee-eccccc--hHHHhh----------cCC-----CCCHHHH----HHHHHHHHHhCCCce---eeEeEEee-cCCC
Q psy2895 165 PDVLN-HNIETV--PRLYKK----------VRP-----GSDYKHS----LNLLKNFKKLYPNIL---TKSGIMVG-LGEN 218 (293)
Q Consensus 165 ~~~i~-~~less--~~~~~~----------i~~-----~~~~e~~----l~~i~~~~~~~pgi~---~~~~~ivG-~gEt 218 (293)
.+.++ ++.... +++++. |+- +.+.++. .+.++.+.++ |+. +-.+-.+| +|-+
T Consensus 92 a~iINdvs~~~d~~~~~~~~~a~~~~~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~--Gi~~~~IilDPg~g~~g~~ 169 (262)
T 1f6y_A 92 RAMINSTNAEREKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMELVAAADEF--GLPMEDLYIDPLILPANVA 169 (262)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHHTTCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHH--TCCGGGEEEECCCCCTTTC
T ss_pred CCEEEECCCCcccHHHHHHHHHHhCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHC--CCCcccEEEeCCCCcCCCC
Confidence 77665 443221 133322 221 1233333 4556678888 984 66665555 4444
Q ss_pred HH---HHHHHHHHHHh
Q psy2895 219 DE---EILTVIHDMRN 231 (293)
Q Consensus 219 ~e---d~~~~l~~l~~ 231 (293)
.+ +..+.+..+++
T Consensus 170 ~~~~~~~l~~l~~l~~ 185 (262)
T 1f6y_A 170 QDHAPEVLKTLQQIKM 185 (262)
T ss_dssp TTHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHH
Confidence 43 55556666666
No 68
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=88.41 E-value=7.9 Score=31.97 Aligned_cols=129 Identities=9% Similarity=0.052 Sum_probs=78.1
Q ss_pred hhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCc--CcHHHHHHHHHHcCCC
Q psy2895 90 IEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFR--NQINHVLKIFKQALPD 166 (293)
Q Consensus 90 ~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~--~~~~e~l~~l~~aG~~ 166 (293)
.+.+.+.++.+.+.|+..++|..-+++ ...+.+...++++... +..+++... |.. .+..+.++.|.+.|++
T Consensus 75 ~~~M~~Di~~~~~~GadGvV~G~Lt~d--g~iD~~~~~~Li~~a~----~~~vTFHRAFD~~~~~d~~~ale~L~~lGv~ 148 (224)
T 2bdq_A 75 LRIMEEDILRAVELESDALVLGILTSN--NHIDTEAIEQLLPATQ----GLPLVFHMAFDVIPKSDQKKSIDQLVALGFT 148 (224)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCBCTT--SSBCHHHHHHHHHHHT----TCCEEECGGGGGSCTTTHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeECCC--CCcCHHHHHHHHHHhC----CCeEEEECchhccCCcCHHHHHHHHHHcCCC
Confidence 344566677788899999988665532 1234667777776554 346777554 544 4446789999999999
Q ss_pred eeee-ccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 167 VLNH-NIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 167 ~i~~-~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
+|-= +.+.+ .+..+-++.++.+.+.. +- ...+|.|-|=|.+.+.+. +++.|+..++.+
T Consensus 149 rILTSG~~~~----------~~a~~g~~~L~~Lv~~a-~~--ri~Im~GgGV~~~Ni~~l---~~~tGv~e~H~s 207 (224)
T 2bdq_A 149 RILLHGSSNG----------EPIIENIKHIKALVEYA-NN--RIEIMVGGGVTAENYQYI---CQETGVKQAHGT 207 (224)
T ss_dssp EEEECSCSSC----------CCGGGGHHHHHHHHHHH-TT--SSEEEECSSCCTTTHHHH---HHHHTCCEEEET
T ss_pred EEECCCCCCC----------CcHHHHHHHHHHHHHhh-CC--CeEEEeCCCCCHHHHHHH---HHhhCCCEEccc
Confidence 9853 22111 11333334444443321 21 235788877776666654 345688888775
No 69
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=88.27 E-value=4.6 Score=34.61 Aligned_cols=74 Identities=11% Similarity=0.059 Sum_probs=53.2
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.|-. .-+.+++.+.++.+.+...| +|+|. +.+.++..+..+.+++.
T Consensus 22 ~~lv~~li~~Gv~gl~v~GttGE~~------~Ls~~Er~~v~~~~~~~~~g------vi~Gvg~~~t~~ai~la~~A~~~ 89 (286)
T 2r91_A 22 ANHVKNITSKGVDVVFVAGTTGLGP------ALSLQEKMELTDAATSAARR------VIVQVASLNADEAIALAKYAESR 89 (286)
T ss_dssp HHHHHHHHHTTCCEEEETSTTTTGG------GSCHHHHHHHHHHHHHHCSS------EEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCEEEECccccChh------hCCHHHHHHHHHHHHHHhCC------EEEeeCCCCHHHHHHHHHHHHhc
Confidence 5667777788998876532221211 23788888999888887444 78888 56888888888989999
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++.+-+
T Consensus 90 Gadavlv 96 (286)
T 2r91_A 90 GAEAVAS 96 (286)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9987655
No 70
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=88.14 E-value=13 Score=32.73 Aligned_cols=138 Identities=11% Similarity=0.080 Sum_probs=82.0
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCC----------CCCCCChhHHHHHHHHHHhhCCCcEEEE--EcC--CCcC--c
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRD----------DLHDGGSSHFVSCIKHIRKLSTKIKIEI--LIP--DFRN--Q 152 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~----------~l~~~~~~~~~~ll~~i~~~~~~~~i~~--~~~--~~~~--~ 152 (293)
+++...+.++.+.+.|+..|-|.+|.|. .+ ..+.+.+.++++.+++.. ++.|.+ -.. +... +
T Consensus 68 ~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l-~~~~~~~~eiv~av~~~v-~~PV~vKiR~g~~~~~~~~~ 145 (350)
T 3b0p_A 68 DPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACL-LLDLARVREILKAMGEAV-RVPVTVKMRLGLEGKETYRG 145 (350)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGG-GGCHHHHHHHHHHHHHHC-SSCEEEEEESCBTTCCCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhH-HhCHHHHHHHHHHHHHHh-CCceEEEEecCcCccccHHH
Confidence 4788888888888999999999887531 11 123567888999998754 333333 221 1111 2
Q ss_pred HHHHHHHHHHcCCCeeeeccccchHHHhh----cCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHH
Q psy2895 153 INHVLKIFKQALPDVLNHNIETVPRLYKK----VRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHD 228 (293)
Q Consensus 153 ~~e~l~~l~~aG~~~i~~~less~~~~~~----i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~ 228 (293)
..+.++.+.++|++.+.+.--+...-+.- -.++.+ ++.++.+++..|++++ +..|=-.|.++..+.+.
T Consensus 146 ~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~----~~~i~~ik~~~~~iPV---ianGgI~s~eda~~~l~- 217 (350)
T 3b0p_A 146 LAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLR----HDWVHRLKGDFPQLTF---VTNGGIRSLEEALFHLK- 217 (350)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCBC----------CCCCC----HHHHHHHHHHCTTSEE---EEESSCCSHHHHHHHHT-
T ss_pred HHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCccc----HHHHHHHHHhCCCCeE---EEECCcCCHHHHHHHHh-
Confidence 25677889999999998742111111100 011122 3556677777555543 12222368888877653
Q ss_pred HHhCCCCEEEee
Q psy2895 229 MRNHNIDILTIG 240 (293)
Q Consensus 229 l~~l~~~~i~i~ 240 (293)
|.|.+.+.
T Consensus 218 ----GaD~V~iG 225 (350)
T 3b0p_A 218 ----RVDGVMLG 225 (350)
T ss_dssp ----TSSEEEEC
T ss_pred ----CCCEEEEC
Confidence 79988775
No 71
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=88.06 E-value=3.8 Score=35.46 Aligned_cols=80 Identities=8% Similarity=0.043 Sum_probs=50.9
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEc-C--CCcCcHHHHHHHHHHcC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILI-P--DFRNQINHVLKIFKQAL 164 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~-~--~~~~~~~e~l~~l~~aG 164 (293)
.+++.+.+.++.+.+.|+..|.+.--.. + ..+..+.++++.+++..|++.+.+.. + |+.. ...+..+ ++|
T Consensus 156 ~~~~~~~~~~~~~~~~G~d~i~l~DT~G--~--~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~--An~laAv-~aG 228 (302)
T 2ftp_A 156 VDPRQVAWVARELQQMGCYEVSLGDTIG--V--GTAGATRRLIEAVASEVPRERLAGHFHDTYGQAL--ANIYASL-LEG 228 (302)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEESSS--C--CCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHH--HHHHHHH-HTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCC--C--cCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHH--HHHHHHH-HhC
Confidence 5678888888888888888777752211 1 12466778888888776655555543 2 3332 4455555 578
Q ss_pred CCeeeecccc
Q psy2895 165 PDVLNHNIET 174 (293)
Q Consensus 165 ~~~i~~~les 174 (293)
++.+..++.+
T Consensus 229 a~~vd~tv~G 238 (302)
T 2ftp_A 229 IAVFDSSVAG 238 (302)
T ss_dssp CCEEEEBGGG
T ss_pred CCEEEecccc
Confidence 8888776654
No 72
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=87.82 E-value=18 Score=33.79 Aligned_cols=131 Identities=11% Similarity=0.149 Sum_probs=84.2
Q ss_pred hHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeee
Q psy2895 91 EEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNH 170 (293)
Q Consensus 91 eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~ 170 (293)
++..+.++.+.+.|+..|.+.+.++ ....+.++++.+++.+|+..+-+. +..+ .+..+.+.++|+|.+.+
T Consensus 255 ~d~~era~aLveaGvd~I~Id~a~g------~~~~v~~~i~~i~~~~~~~~vi~g--~v~t--~e~a~~~~~aGad~i~v 324 (511)
T 3usb_A 255 ADAMTRIDALVKASVDAIVLDTAHG------HSQGVIDKVKEVRAKYPSLNIIAG--NVAT--AEATKALIEAGANVVKV 324 (511)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCT------TSHHHHHHHHHHHHHCTTSEEEEE--EECS--HHHHHHHHHHTCSEEEE
T ss_pred cchHHHHHHHHhhccceEEeccccc------chhhhhhHHHHHHHhCCCceEEee--eecc--HHHHHHHHHhCCCEEEE
Confidence 4456778888899999998876653 135788999999998876544432 1233 67788889999999987
Q ss_pred cccc-c---hHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhCCCCEEEeecC
Q psy2895 171 NIET-V---PRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNHNIDILTIGQY 242 (293)
Q Consensus 171 ~les-s---~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l~~~~i~i~~~ 242 (293)
+... + .+...... .-++..+.++.+.+++. ++++ |..- --+.+|+.+.+ .+|.+.+.+...
T Consensus 325 g~g~gsi~~~~~~~g~g-~p~~~~l~~v~~~~~~~--~iPV----Ia~GGI~~~~di~kal----a~GA~~V~vGs~ 390 (511)
T 3usb_A 325 GIGPGSICTTRVVAGVG-VPQLTAVYDCATEARKH--GIPV----IADGGIKYSGDMVKAL----AAGAHVVMLGSM 390 (511)
T ss_dssp CSSCSTTCCHHHHHCCC-CCHHHHHHHHHHHHHTT--TCCE----EEESCCCSHHHHHHHH----HTTCSEEEESTT
T ss_pred CCCCccccccccccCCC-CCcHHHHHHHHHHHHhC--CCcE----EEeCCCCCHHHHHHHH----HhCchhheecHH
Confidence 6543 2 23332222 12344455555555555 6654 3322 35777776664 479998888643
No 73
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=86.90 E-value=4.8 Score=34.29 Aligned_cols=137 Identities=11% Similarity=0.049 Sum_probs=82.0
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecC-CCCCC----CChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNR-DDLHD----GGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIF 160 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~-~~l~~----~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l 160 (293)
+..+.+..++.++++.+.|+.-|-+.|... |.... .+.+++..+++.+++ +++.|.+=| .. .+++++-
T Consensus 25 ~~~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~--~~v~iSIDT---~~--~~Va~~a 97 (270)
T 4hb7_A 25 KFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVG--FDVKISVDT---FR--SEVAEAC 97 (270)
T ss_dssp --CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTT--SSSEEEEEC---SC--HHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhc--CCCeEEEEC---CC--HHHHHHH
Confidence 456889999999999999999887755421 11111 224567778888865 355666532 33 5677776
Q ss_pred HHcCCCeee-ec-cccchHHHhh----------cC----CCC-C-----HHHHHHHHHHHHHhCCCce---eeEeEEeec
Q psy2895 161 KQALPDVLN-HN-IETVPRLYKK----------VR----PGS-D-----YKHSLNLLKNFKKLYPNIL---TKSGIMVGL 215 (293)
Q Consensus 161 ~~aG~~~i~-~~-less~~~~~~----------i~----~~~-~-----~e~~l~~i~~~~~~~pgi~---~~~~~ivG~ 215 (293)
-++|++.++ ++ ....+++++. |+ +.+ + .+...+.++.+.++ |+. +-.+==+||
T Consensus 98 l~aGa~iINDVs~g~~d~~m~~~va~~~~~~vlMH~~~~p~~~~vv~ev~~~l~~~i~~a~~a--GI~~~~IilDPGiGF 175 (270)
T 4hb7_A 98 LKLGVDMINDQWAGLYDHRMFQIVAKYDAEIILMHNGNGNRDEPVVEEMLTSLLAQAHQAKIA--GIPSNKIWLDPGIGF 175 (270)
T ss_dssp HHHTCCEEEETTTTSSCTHHHHHHHHTTCEEEEECCCSSCCSSCHHHHHHHHHHHHHHHHHHT--TCCGGGEEEECCTTS
T ss_pred HHhccceeccccccccchhHHHHHHHcCCCeEEeccccCCccccchhHHHHHHHHHHHHHHHc--CCCCceEEEeCCCCc
Confidence 678888876 32 2222333332 22 111 1 23344556778888 983 445555577
Q ss_pred CCCHHHHHHHHHHHHh
Q psy2895 216 GENDEEILTVIHDMRN 231 (293)
Q Consensus 216 gEt~ed~~~~l~~l~~ 231 (293)
|-|.++=.+++..+.+
T Consensus 176 gKt~~~N~~ll~~l~~ 191 (270)
T 4hb7_A 176 AKTRNEEAEVMARLDE 191 (270)
T ss_dssp SCCHHHHHHHHTCHHH
T ss_pred ccccccHHHHHhhHHH
Confidence 8888886666655544
No 74
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=86.89 E-value=5.3 Score=34.36 Aligned_cols=74 Identities=15% Similarity=0.032 Sum_probs=51.4
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.+-. .-+.+++.+.++.+.+...| +|+|. +.+.++..+..+.+++.
T Consensus 23 ~~lv~~li~~Gv~gl~~~GttGE~~------~Ls~eEr~~v~~~~~~~~~g------viaGvg~~~t~~ai~la~~A~~~ 90 (293)
T 1w3i_A 23 KIHAENLIRKGIDKLFVNGTTGLGP------SLSPEEKLENLKAVYDVTNK------IIFQVGGLNLDDAIRLAKLSKDF 90 (293)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTTGG------GSCHHHHHHHHHHHHTTCSC------EEEECCCSCHHHHHHHHHHGGGS
T ss_pred HHHHHHHHHcCCCEEEECccccChh------hCCHHHHHHHHHHHHHHcCC------EEEecCCCCHHHHHHHHHHHHhc
Confidence 5666777778888876532121111 23778888888888877444 78888 56778888888888888
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++.+-+
T Consensus 91 Gadavlv 97 (293)
T 1w3i_A 91 DIVGIAS 97 (293)
T ss_dssp CCSEEEE
T ss_pred CCCEEEE
Confidence 8887654
No 75
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=86.65 E-value=8.6 Score=32.66 Aligned_cols=83 Identities=23% Similarity=0.171 Sum_probs=52.5
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCC---------------ChhHHHHHHHHHHhhCCCcEEEEEc---CCC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDG---------------GSSHFVSCIKHIRKLSTKIKIEILI---PDF 149 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~---------------~~~~~~~ll~~i~~~~~~~~i~~~~---~~~ 149 (293)
.+.+...+.++.+.+.|+.-|-+.--..+++-+. +.+.+.++++.+++..+++.+.+++ |-+
T Consensus 29 P~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~ 108 (267)
T 3vnd_A 29 PSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVF 108 (267)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHH
Confidence 3577888889999999999777652221112111 1235678888888764455566643 211
Q ss_pred cCcHHHHHHHHHHcCCCeeee
Q psy2895 150 RNQINHVLKIFKQALPDVLNH 170 (293)
Q Consensus 150 ~~~~~e~l~~l~~aG~~~i~~ 170 (293)
.--++..++.++++|+|.+-+
T Consensus 109 ~~g~e~f~~~~~~aGvdgvii 129 (267)
T 3vnd_A 109 ANGIDEFYTKAQAAGVDSVLI 129 (267)
T ss_dssp HHCHHHHHHHHHHHTCCEEEE
T ss_pred HhhHHHHHHHHHHcCCCEEEe
Confidence 101266889999999999765
No 76
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=86.49 E-value=2.9 Score=34.60 Aligned_cols=128 Identities=5% Similarity=0.126 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeec
Q psy2895 92 EPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHN 171 (293)
Q Consensus 92 ei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~ 171 (293)
+..+.++.+.+.|++.+++..-+.. . .. .... +.++.+++.. ++.+.+ .+.+.+ .+.++.+.++|++.+.++
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~-~-~~-~~~~-~~i~~i~~~~-~ipv~v--~ggi~~-~~~~~~~l~~Gad~V~lg 103 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAA-F-GR-GSNH-ELLAEVVGKL-DVQVEL--SGGIRD-DESLAAALATGCARVNVG 103 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHH-T-TS-CCCH-HHHHHHHHHC-SSEEEE--ESSCCS-HHHHHHHHHTTCSEEEEC
T ss_pred CHHHHHHHHHHcCCCEEEEEcCccc-c-cC-CChH-HHHHHHHHhc-CCcEEE--ECCCCC-HHHHHHHHHcCCCEEEEC
Confidence 6677788888899999988753321 1 11 1123 7788887754 333333 333333 677888889999999987
Q ss_pred cccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEE-------e---ecC-CCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 172 IETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIM-------V---GLG-ENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 172 less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~i-------v---G~g-Et~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
.+.. . +++...+.++.+.. .+.+..+.- + |.. .+. +..+.++.+.+.|++.+.++
T Consensus 104 ~~~l----~------~p~~~~~~~~~~g~---~~~~~ld~~~~~~~~~v~~~g~~~~~~-~~~e~~~~~~~~G~~~i~~~ 169 (244)
T 2y88_A 104 TAAL----E------NPQWCARVIGEHGD---QVAVGLDVQIIDGEHRLRGRGWETDGG-DLWDVLERLDSEGCSRFVVT 169 (244)
T ss_dssp HHHH----H------CHHHHHHHHHHHGG---GEEEEEEEEEETTEEEEEEGGGTEEEE-EHHHHHHHHHHTTCCCEEEE
T ss_pred chHh----h------ChHHHHHHHHHcCC---CEEEEEeccccCCCCEEEECCccCCCC-CHHHHHHHHHhCCCCEEEEE
Confidence 5431 1 12333333333321 122222222 1 111 111 45566677788899988776
Q ss_pred c
Q psy2895 241 Q 241 (293)
Q Consensus 241 ~ 241 (293)
.
T Consensus 170 ~ 170 (244)
T 2y88_A 170 D 170 (244)
T ss_dssp E
T ss_pred e
Confidence 3
No 77
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=86.41 E-value=16 Score=33.94 Aligned_cols=132 Identities=8% Similarity=0.096 Sum_probs=81.7
Q ss_pred hHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeee
Q psy2895 91 EEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNH 170 (293)
Q Consensus 91 eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~ 170 (293)
++..+.++.+.+.|+..|.+....+ ....+.+.++.+++.+|+..+-+. +..+ .+.++.+.++|+|.+.+
T Consensus 228 ~~~~~~a~~l~~aG~d~I~id~a~g------~~~~~~~~v~~i~~~~p~~~Vi~g--~v~t--~e~a~~l~~aGaD~I~v 297 (490)
T 4avf_A 228 ADTGERVAALVAAGVDVVVVDTAHG------HSKGVIERVRWVKQTFPDVQVIGG--NIAT--AEAAKALAEAGADAVKV 297 (490)
T ss_dssp TTHHHHHHHHHHTTCSEEEEECSCC------SBHHHHHHHHHHHHHCTTSEEEEE--EECS--HHHHHHHHHTTCSEEEE
T ss_pred cchHHHHHHHhhcccceEEecccCC------cchhHHHHHHHHHHHCCCceEEEe--eeCc--HHHHHHHHHcCCCEEEE
Confidence 4556778888889999988876543 135788999999998876555442 1233 67788889999999988
Q ss_pred cccc-ch---HHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhCCCCEEEeecCC
Q psy2895 171 NIET-VP---RLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNHNIDILTIGQYL 243 (293)
Q Consensus 171 ~les-s~---~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l~~~~i~i~~~~ 243 (293)
+... +. +...... .-+++-+.++.+.+++. ++++ |..- -.|.+|+.+.+. +|.+.+.+...+
T Consensus 298 g~g~Gs~~~t~~~~g~g-~p~~~~l~~v~~~~~~~--~iPV----Ia~GGI~~~~di~kal~----~GAd~V~vGs~~ 364 (490)
T 4avf_A 298 GIGPGSICTTRIVAGVG-VPQISAIANVAAALEGT--GVPL----IADGGIRFSGDLAKAMV----AGAYCVMMGSMF 364 (490)
T ss_dssp CSSCSTTCHHHHHTCBC-CCHHHHHHHHHHHHTTT--TCCE----EEESCCCSHHHHHHHHH----HTCSEEEECTTT
T ss_pred CCCCCcCCCccccCCCC-ccHHHHHHHHHHHhccC--CCcE----EEeCCCCCHHHHHHHHH----cCCCeeeecHHH
Confidence 5432 31 2111121 11344444444444444 5543 3322 357788777654 588888876443
No 78
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=86.16 E-value=5 Score=34.44 Aligned_cols=74 Identities=9% Similarity=-0.012 Sum_probs=47.7
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.|-. .-+.+++.+.++.+.+...| +|+|. +.+.++..+..+.+++.
T Consensus 23 ~~lv~~li~~Gv~gl~v~GtTGE~~------~Ls~eEr~~v~~~~~~~~~g------ViaGvg~~~t~~ai~la~~A~~~ 90 (288)
T 2nuw_A 23 KTHAKNLLEKGIDAIFVNGTTGLGP------ALSKDEKRQNLNALYDVTHK------LIFQVGSLNLNDVMELVKFSNEM 90 (288)
T ss_dssp HHHHHHHHHTTCCEEEETSTTTTGG------GSCHHHHHHHHHHHTTTCSC------EEEECCCSCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHcCCCEEEECccccChh------hCCHHHHHHHHHHHHHHhCC------eEEeeCCCCHHHHHHHHHHHHhc
Confidence 4566666677888766532111111 22677788888877776333 67777 55777777778888888
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|+|-+-+
T Consensus 91 Gadavlv 97 (288)
T 2nuw_A 91 DILGVSS 97 (288)
T ss_dssp CCSEEEE
T ss_pred CCCEEEE
Confidence 8886544
No 79
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=85.86 E-value=22 Score=36.16 Aligned_cols=143 Identities=10% Similarity=0.142 Sum_probs=86.7
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCCCCC--------CCChhHHHHHHHHHHhhCC-CcEEEEEcCCCcCcHHHHHHH
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRDDLH--------DGGSSHFVSCIKHIRKLST-KIKIEILIPDFRNQINHVLKI 159 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~--------~~~~~~~~~ll~~i~~~~~-~~~i~~~~~~~~~~~~e~l~~ 159 (293)
++++..+.++.+.+.|+..|.+..+.|.... ..+.+.+.++++.+++... .+.+++ +++.. ++.+.++.
T Consensus 646 ~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~-~~~~~-~~~~~a~~ 723 (1025)
T 1gte_A 646 NKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKL-TPNVT-DIVSIARA 723 (1025)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEE-CSCSS-CHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEe-CCChH-HHHHHHHH
Confidence 4788888888888889999988776542210 0235678889999987631 133444 34433 23678888
Q ss_pred HHHcCCCeeeec--------ccc---c-hHH--Hh-hcCCCC----CHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHH
Q psy2895 160 FKQALPDVLNHN--------IET---V-PRL--YK-KVRPGS----DYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDE 220 (293)
Q Consensus 160 l~~aG~~~i~~~--------les---s-~~~--~~-~i~~~~----~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~e 220 (293)
+.++|+|.+.+. ++. . +.+ +. .-..++ .+...++.+..+++..|++++ +..|=-.|.+
T Consensus 724 ~~~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipv---i~~GGI~s~~ 800 (1025)
T 1gte_A 724 AKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPI---LATGGIDSAE 800 (1025)
T ss_dssp HHHHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCE---EEESSCCSHH
T ss_pred HHHcCCCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCE---EEecCcCCHH
Confidence 899999998872 110 0 000 00 000111 122236778888887656643 2233357888
Q ss_pred HHHHHHHHHHhCCCCEEEee
Q psy2895 221 EILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 221 d~~~~l~~l~~l~~~~i~i~ 240 (293)
|..+.+. +|.+.+.+.
T Consensus 801 da~~~l~----~Ga~~v~vg 816 (1025)
T 1gte_A 801 SGLQFLH----SGASVLQVC 816 (1025)
T ss_dssp HHHHHHH----TTCSEEEES
T ss_pred HHHHHHH----cCCCEEEEe
Confidence 8877764 699988875
No 80
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=85.84 E-value=7.6 Score=32.59 Aligned_cols=98 Identities=11% Similarity=0.150 Sum_probs=63.7
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecC---CCCCCCChhHHHHHHHHHHhhCCC--cEEEEEcCCCcCcHHHHHHHHHH
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNR---DDLHDGGSSHFVSCIKHIRKLSTK--IKIEILIPDFRNQINHVLKIFKQ 162 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~---~~l~~~~~~~~~~ll~~i~~~~~~--~~i~~~~~~~~~~~~e~l~~l~~ 162 (293)
.+...+.++++.+.+.|++.+++-=.+. |.+. .+ .++++.+++..|+ +.++++..+ . ...++.+.+
T Consensus 37 aD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit-~G----~~~v~~lr~~~p~~~ldvHLmv~~--p--~~~i~~~~~ 107 (246)
T 3inp_A 37 ADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLT-FG----PMVLKALRDYGITAGMDVHLMVKP--V--DALIESFAK 107 (246)
T ss_dssp SCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBC-CC----HHHHHHHHHHTCCSCEEEEEECSS--C--HHHHHHHHH
T ss_pred CChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchh-cC----HHHHHHHHHhCCCCeEEEEEeeCC--H--HHHHHHHHH
Confidence 4567788888888889998776644432 2232 12 2566777766533 356665421 1 457888999
Q ss_pred cCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeE
Q psy2895 163 ALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKS 209 (293)
Q Consensus 163 aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~ 209 (293)
+|.|.+++..|+.+ + ..+.++.+++. |+.+..
T Consensus 108 aGAd~itvH~Ea~~----------~---~~~~i~~ir~~--G~k~Gv 139 (246)
T 3inp_A 108 AGATSIVFHPEASE----------H---IDRSLQLIKSF--GIQAGL 139 (246)
T ss_dssp HTCSEEEECGGGCS----------C---HHHHHHHHHTT--TSEEEE
T ss_pred cCCCEEEEccccch----------h---HHHHHHHHHHc--CCeEEE
Confidence 99999999877531 1 34667777888 886543
No 81
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=85.79 E-value=7.2 Score=34.84 Aligned_cols=124 Identities=9% Similarity=0.036 Sum_probs=76.4
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCC---cEEEEEc-CCCcCcHHHHHHHHHHc
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTK---IKIEILI-PDFRNQINHVLKIFKQA 163 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~---~~i~~~~-~~~~~~~~e~l~~l~~a 163 (293)
.+++.+.+.++.+.+.|+..|.|.--.. ...+..+.++++.+++..|+ ..+.+.. +++.--+.-.+..+ ++
T Consensus 154 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G----~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laAv-~a 228 (370)
T 3rmj_A 154 SEIDFLAEICGAVIEAGATTINIPDTVG----YSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAAL-KG 228 (370)
T ss_dssp SCHHHHHHHHHHHHHHTCCEEEEECSSS----CCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHHH-HT
T ss_pred cCHHHHHHHHHHHHHcCCCEEEecCccC----CcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHHHH-Hh
Confidence 5788899999999999999888742221 12256888999999988875 5666654 32221124466666 58
Q ss_pred CCCeeeecccc-chHHHhhcCCCCCHHHHHHHHHHHH-HhCCCceeeEeEEeecCCCHHHHHHHHHHHHh
Q psy2895 164 LPDVLNHNIET-VPRLYKKVRPGSDYKHSLNLLKNFK-KLYPNILTKSGIMVGLGENDEEILTVIHDMRN 231 (293)
Q Consensus 164 G~~~i~~~les-s~~~~~~i~~~~~~e~~l~~i~~~~-~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~ 231 (293)
|++.+...+.+ .++ ..+-+.++++-.++.-. .. |+.+ |-..+.+.++.+++.+
T Consensus 229 Ga~~vd~tv~GlGer-----aGN~~lE~vv~~L~~~~~~~--g~~t--------gidl~~L~~~s~~v~~ 283 (370)
T 3rmj_A 229 GARQVECTVNGLGER-----AGNASVEEIVMALKVRHDLF--GLET--------GIDTTQIVPSSKLVST 283 (370)
T ss_dssp TCCEEEEBGGGCSST-----TCBCBHHHHHHHHHHTHHHH--CCBC--------CCCGGGHHHHHHHHHH
T ss_pred CCCEEEEeccccCcc-----cccccHHHHHHHHHhhhhcc--CCCC--------CcCHHHHHHHHHHHHH
Confidence 99999887766 231 11236676665554321 23 4433 2233456666666654
No 82
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=85.69 E-value=12 Score=32.15 Aligned_cols=128 Identities=13% Similarity=0.042 Sum_probs=75.3
Q ss_pred hhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcCcHHHHHHHHHHcCCCee
Q psy2895 90 IEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRNQINHVLKIFKQALPDVL 168 (293)
Q Consensus 90 ~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~~~~e~l~~l~~aG~~~i 168 (293)
.+.+.+.++.+.+.|+..|+|..-++ +- ..+.+...++++... ...+++... |...+..+.++.|.+.|+++|
T Consensus 110 ~~~M~~dI~~~~~~GAdGvVfG~L~~-dg-~iD~~~~~~Li~~a~----~l~vTFHRAFD~~~d~~~Ale~Li~lGvdrI 183 (287)
T 3iwp_A 110 IEVMKADIRLAKLYGADGLVFGALTE-DG-HIDKELCMSLMAICR----PLPVTFHRAFDMVHDPMAALETLLTLGFERV 183 (287)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCBCT-TS-CBCHHHHHHHHHHHT----TSCEEECGGGGGCSCHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeeCC-CC-CcCHHHHHHHHHHcC----CCcEEEECchhccCCHHHHHHHHHHcCCCEE
Confidence 44456677788889999998765332 11 224566777776554 246777554 544444778999999999998
Q ss_pred eeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 169 NHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 169 ~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
--+-+.. +..+-++.++.+.+.. +- ...+++|=|=+.+.+.+.+ +..|++.++.+
T Consensus 184 LTSG~~~-----------~a~~Gl~~Lk~Lv~~a-~~--rI~ImaGGGV~~~Ni~~l~---~~tG~~~~H~S 238 (287)
T 3iwp_A 184 LTSGCDS-----------SALEGLPLIKRLIEQA-KG--RIVVMPGGGITDRNLQRIL---EGSGATEFHCS 238 (287)
T ss_dssp EECTTSS-----------STTTTHHHHHHHHHHH-TT--SSEEEECTTCCTTTHHHHH---HHHCCSEEEEC
T ss_pred ECCCCCC-----------ChHHhHHHHHHHHHHh-CC--CCEEEECCCcCHHHHHHHH---HhhCCCEEeEC
Confidence 6542210 1111223333433321 21 2356777776666665544 34788877764
No 83
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=85.64 E-value=17 Score=31.42 Aligned_cols=78 Identities=10% Similarity=0.074 Sum_probs=47.0
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHH---hhCCCcEEEEEcCCCcCcHHHHHHHHHH-
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIR---KLSTKIKIEILIPDFRNQINHVLKIFKQ- 162 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~---~~~~~~~i~~~~~~~~~~~~e~l~~l~~- 162 (293)
..+.+.+++.+++..+.|+.-|-+.+|..+ .. ..+.+..++..|. +. .++.|.+=| .. .++++.--+
T Consensus 33 ~~~~~~a~~~A~~~v~~GAdiIDIg~g~~~-v~--~~eem~rvv~~i~~~~~~-~~vpisIDT---~~--~~V~eaaL~~ 103 (300)
T 3k13_A 33 EKKYDEALSIARQQVEDGALVIDVNMDDGL-LD--ARTEMTTFLNLIMSEPEI-ARVPVMIDS---SK--WEVIEAGLKC 103 (300)
T ss_dssp TTCHHHHHHHHHHHHHTTCSEEEEECCCTT-SC--HHHHHHHHHHHHHTCHHH-HTSCEEEEC---SC--HHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCCCC-CC--HHHHHHHHHHHHHHhhhc-CCCeEEEeC---CC--HHHHHHHHHh
Confidence 467899999999999999999988876532 21 1234444444443 22 134455533 22 555555444
Q ss_pred -cCCCeee-eccc
Q psy2895 163 -ALPDVLN-HNIE 173 (293)
Q Consensus 163 -aG~~~i~-~~le 173 (293)
+|.+.++ ++.+
T Consensus 104 ~~Ga~iINdIs~~ 116 (300)
T 3k13_A 104 LQGKSIVNSISLK 116 (300)
T ss_dssp CSSCCEEEEECST
T ss_pred cCCCCEEEeCCcc
Confidence 5877664 4443
No 84
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=85.46 E-value=6.7 Score=34.56 Aligned_cols=119 Identities=4% Similarity=0.061 Sum_probs=76.1
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCC-CcEEEEEc-C--CCcCcHHHHHHHHHHc
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLST-KIKIEILI-P--DFRNQINHVLKIFKQA 163 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~-~~~i~~~~-~--~~~~~~~e~l~~l~~a 163 (293)
.+++.+.+.++.+.+.|+..|.+.+-.. . ..+..+.++++.+++..| ++.+.+.+ + |+.- ...+..+ ++
T Consensus 146 ~~~e~~~~ia~~~~~~Ga~~i~l~DT~G--~--~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~av--An~laA~-~a 218 (345)
T 1nvm_A 146 IPAEKLAEQGKLMESYGATCIYMADSGG--A--MSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGV--ANSIVAV-EE 218 (345)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECTTC--C--CCHHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHH--HHHHHHH-HT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcC--c--cCHHHHHHHHHHHHHhcCCCceEEEEECCCccHHH--HHHHHHH-Hc
Confidence 4688999999999999999888865433 1 125788999999998875 66777755 2 3322 4455555 58
Q ss_pred CCCeeeecccc-chHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHh
Q psy2895 164 LPDVLNHNIET-VPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRN 231 (293)
Q Consensus 164 G~~~i~~~les-s~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~ 231 (293)
|++.+...+-+ .+. ..+-+.++.+-.++ .. |+.+ |-..+.+.+..+.+.+
T Consensus 219 Ga~~vd~tv~GlG~~-----aGN~~le~lv~~L~---~~--g~~~--------~idl~~l~~~~~~~~~ 269 (345)
T 1nvm_A 219 GCDRVDASLAGMGAG-----AGNAPLEVFIAVAE---RL--GWNH--------GTDLYTLMDAADDIVR 269 (345)
T ss_dssp TCCEEEEBGGGCSST-----TCBCBHHHHHHHHH---HH--TCBC--------CSCHHHHHHHHHHTTG
T ss_pred CCCEEEecchhccCC-----ccCcCHHHHHHHHH---hc--CCCC--------CCCHHHHHHHHHHHHH
Confidence 99999877665 321 12235666655544 34 6543 2345566666655533
No 85
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=85.32 E-value=15 Score=30.39 Aligned_cols=75 Identities=7% Similarity=0.130 Sum_probs=48.8
Q ss_pred hHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeee
Q psy2895 91 EEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNH 170 (293)
Q Consensus 91 eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~ 170 (293)
.+..+.++.+.+.|++.+.+...+.. . .......+.++.+++.. ++.+-+. .++.+ .+.++.+.++|+|.+.+
T Consensus 30 ~d~~~~a~~~~~~Gad~i~v~d~~~~-~--~~~~~~~~~i~~i~~~~-~ipvi~~-ggI~~--~~~~~~~~~~Gad~V~l 102 (253)
T 1thf_D 30 GDPVELGKFYSEIGIDELVFLDITAS-V--EKRKTMLELVEKVAEQI-DIPFTVG-GGIHD--FETASELILRGADKVSI 102 (253)
T ss_dssp TCHHHHHHHHHHTTCCEEEEEESSCS-S--SHHHHHHHHHHHHHTTC-CSCEEEE-SSCCS--HHHHHHHHHTTCSEEEE
T ss_pred cCHHHHHHHHHHcCCCEEEEECCchh-h--cCCcccHHHHHHHHHhC-CCCEEEe-CCCCC--HHHHHHHHHcCCCEEEE
Confidence 45677778888899999988754421 1 12334567778887753 2333332 13333 67788888899999988
Q ss_pred cc
Q psy2895 171 NI 172 (293)
Q Consensus 171 ~l 172 (293)
+-
T Consensus 103 g~ 104 (253)
T 1thf_D 103 NT 104 (253)
T ss_dssp SH
T ss_pred Ch
Confidence 74
No 86
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=85.26 E-value=8.6 Score=34.47 Aligned_cols=182 Identities=14% Similarity=0.155 Sum_probs=96.1
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEE-EcCCCcCcH---HHHHHHHHHcC
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEI-LIPDFRNQI---NHVLKIFKQAL 164 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~-~~~~~~~~~---~e~l~~l~~aG 164 (293)
+.++..+.++.+.+.|++.|+-+=..+.+-...-.+.+.++++..++. ++.+-+ .+|..+..+ .+.++.|++.|
T Consensus 39 ~~~~~~~Yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~--g~~vi~DVsp~~~~~Lg~s~~dl~~f~~lG 116 (385)
T 1x7f_A 39 TKEKDMAYISAAARHGFSRIFTCLLSVNRPKEEIVAEFKEIINHAKDN--NMEVILDVAPAVFDQLGISYSDLSFFAELG 116 (385)
T ss_dssp CHHHHHHHHHHHHTTTEEEEEEEECCC--------HHHHHHHHHHHHT--TCEEEEEECTTCC------CCCTHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHC--CCEEEEECCHHHHHHcCCCHHHHHHHHHcC
Confidence 467777888999999999886433222111112247788888888886 445544 345433221 24577888899
Q ss_pred CCeeee--ccccchHHHhhcCCC---------C-CHHHHHHHHHHHHHhCCCc---eeeEeEEee--cCCCHHHHHHHHH
Q psy2895 165 PDVLNH--NIETVPRLYKKVRPG---------S-DYKHSLNLLKNFKKLYPNI---LTKSGIMVG--LGENDEEILTVIH 227 (293)
Q Consensus 165 ~~~i~~--~less~~~~~~i~~~---------~-~~e~~l~~i~~~~~~~pgi---~~~~~~ivG--~gEt~ed~~~~l~ 227 (293)
++.+-+ ++.. +++-+ |... - +..+.+ ..+.+.-|.. ..+-++-.= -|=+.+.+.+.-+
T Consensus 117 i~gLRLD~Gf~~-~eia~-ls~n~~glkIeLNASt~~~~l---~~l~~~~~n~~~l~acHNFYPr~~TGLs~~~f~~~n~ 191 (385)
T 1x7f_A 117 ADGIRLDVGFDG-LTEAK-MTNNPYGLKIELNVSNDIAYL---ENILSHQANKSALIGCHNFYPQKFTGLPYDYFIRCSE 191 (385)
T ss_dssp CSEEEESSCCSS-HHHHH-HTTCTTCCEEEEETTSCSSHH---HHHTTSSCCGGGEEEECCCBCSTTCSBCHHHHHHHHH
T ss_pred CCEEEEcCCCCH-HHHHH-HhcCCCCCEEEEeCcCCHHHH---HHHHHcCCChHHeEEeeccCCCCCCCCCHHHHHHHHH
Confidence 998876 4433 22211 2111 0 122233 3444442222 122222211 1678899999999
Q ss_pred HHHhCCCCEEEeecC----CCCCC-----CccccccccChhHHHHHHHHHHHhc-ccchhccc
Q psy2895 228 DMRNHNIDILTIGQY----LMPSR-----LHLPVHRYLHPKFFEKFKKIAYKLG-FKNVLVGS 280 (293)
Q Consensus 228 ~l~~l~~~~i~i~~~----~~p~~-----~~~a~~r~~~p~~~~~~~~~~~~~G-~~~~~~~~ 280 (293)
++++.|+...-+-+- ..|.| -++-..|.+.|.. .+.... ..| +..+.+|+
T Consensus 192 ~~k~~Gi~t~AFI~g~~~~rGPwpl~eGLPTLE~HR~~~~~~--~a~~L~-~~g~iD~ViIGd 251 (385)
T 1x7f_A 192 RFKKHGIRSAAFITSHVANIGPWDINDGLCTLEEHRNLPIEV--QAKHLW-ATGLIDDVIIGN 251 (385)
T ss_dssp HHHHTTCCCEEEECCSSCCBCSSSCCSCCBSBGGGTTSCHHH--HHHHHH-HTTSCCEEEECS
T ss_pred HHHHCCCcEEEEecCCccccCCccccCCCCchHHHCCCCHHH--HHHHHH-hcCCCCEEEECC
Confidence 999999875432111 01311 2444556666643 222232 336 77777776
No 87
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=84.43 E-value=8.5 Score=33.23 Aligned_cols=77 Identities=6% Similarity=0.104 Sum_probs=51.3
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.| .. .-+.+++.+.++.+.+...| ...+|+|. +.+.++..+..+.+++.
T Consensus 36 ~~lv~~li~~Gv~gl~v~GtTGE-~~-----~Ls~eEr~~v~~~~~~~~~g---rvpViaGvg~~~t~~ai~la~~A~~~ 106 (301)
T 1xky_A 36 TKLVNYLIDNGTTAIVVGGTTGE-SP-----TLTSEEKVALYRHVVSVVDK---RVPVIAGTGSNNTHASIDLTKKATEV 106 (301)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTT-GG-----GSCHHHHHHHHHHHHHHHTT---SSCEEEECCCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEECccccC-hh-----hCCHHHHHHHHHHHHHHhCC---CceEEeCCCCCCHHHHHHHHHHHHhc
Confidence 56667777788888765321211 11 23678888888887776333 23567888 56778888888888888
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+-+
T Consensus 107 Gadavlv 113 (301)
T 1xky_A 107 GVDAVML 113 (301)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8887644
No 88
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=84.30 E-value=26 Score=32.47 Aligned_cols=132 Identities=11% Similarity=0.047 Sum_probs=83.2
Q ss_pred hHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeee
Q psy2895 91 EEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNH 170 (293)
Q Consensus 91 eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~ 170 (293)
++..+.++.+.+.|+..|.+....+ ....+.+.++.+++.+|+..+-+.. ..+ .+.++.+.++|+|.+.+
T Consensus 230 ~d~~~~a~~l~~aG~d~I~id~a~g------~~~~~~~~i~~ir~~~p~~~Vi~g~--v~t--~e~a~~l~~aGaD~I~V 299 (496)
T 4fxs_A 230 PGNEERVKALVEAGVDVLLIDSSHG------HSEGVLQRIRETRAAYPHLEIIGGN--VAT--AEGARALIEAGVSAVKV 299 (496)
T ss_dssp SCCHHHHHHHHHTTCSEEEEECSCT------TSHHHHHHHHHHHHHCTTCCEEEEE--ECS--HHHHHHHHHHTCSEEEE
T ss_pred cchHHHHHHHHhccCceEEeccccc------cchHHHHHHHHHHHHCCCceEEEcc--cCc--HHHHHHHHHhCCCEEEE
Confidence 3446677888888999998876653 1357889999999988765554421 223 67788889999999987
Q ss_pred ccc-cc---hHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhCCCCEEEeecCC
Q psy2895 171 NIE-TV---PRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNHNIDILTIGQYL 243 (293)
Q Consensus 171 ~le-ss---~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l~~~~i~i~~~~ 243 (293)
+.- ++ .+...... .-.+.-+.++.+.+++. ++++ |..- --|.+|+.+.+ .+|.+.+-+...+
T Consensus 300 g~g~Gs~~~tr~~~g~g-~p~~~~i~~v~~~~~~~--~iPV----Ia~GGI~~~~di~kal----a~GAd~V~iGs~f 366 (496)
T 4fxs_A 300 GIGPGSICTTRIVTGVG-VPQITAIADAAGVANEY--GIPV----IADGGIRFSGDISKAI----AAGASCVMVGSMF 366 (496)
T ss_dssp CSSCCTTBCHHHHHCCC-CCHHHHHHHHHHHHGGG--TCCE----EEESCCCSHHHHHHHH----HTTCSEEEESTTT
T ss_pred CCCCCcCcccccccCCC-ccHHHHHHHHHHHhccC--CCeE----EEeCCCCCHHHHHHHH----HcCCCeEEecHHH
Confidence 531 12 22222222 12445555556666565 6653 3322 35777876664 4699988886443
No 89
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=84.30 E-value=17 Score=30.47 Aligned_cols=84 Identities=15% Similarity=0.067 Sum_probs=53.0
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCC---------------CChhHHHHHHHHHHhhCCCcEEEEEc--CC-C
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHD---------------GGSSHFVSCIKHIRKLSTKIKIEILI--PD-F 149 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~---------------~~~~~~~~ll~~i~~~~~~~~i~~~~--~~-~ 149 (293)
.+.++..+.++.+.+.|+..|-+..-..+++.+ ...+.+.++++.+++..|++.+-+++ +- +
T Consensus 28 p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m~y~n~v~ 107 (262)
T 2ekc_A 28 PDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLMTYYNPIF 107 (262)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEECCHHHHH
T ss_pred CChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEEecCcHHH
Confidence 356788999999999999988773221111111 11245668899998876566666642 10 1
Q ss_pred cCcHHHHHHHHHHcCCCeeeec
Q psy2895 150 RNQINHVLKIFKQALPDVLNHN 171 (293)
Q Consensus 150 ~~~~~e~l~~l~~aG~~~i~~~ 171 (293)
...++..++.++++|++.+.++
T Consensus 108 ~~g~~~f~~~~~~aG~dgvii~ 129 (262)
T 2ekc_A 108 RIGLEKFCRLSREKGIDGFIVP 129 (262)
T ss_dssp HHCHHHHHHHHHHTTCCEEECT
T ss_pred HhhHHHHHHHHHHcCCCEEEEC
Confidence 1011567888999999988764
No 90
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=84.30 E-value=8.7 Score=32.94 Aligned_cols=77 Identities=9% Similarity=0.031 Sum_probs=54.4
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.| .. .-+.+++.+.++.+.+...| ...+|+|. +.+.++..+..+.+++.
T Consensus 25 ~~lv~~li~~Gv~gl~~~GttGE-~~-----~Ls~~Er~~v~~~~~~~~~g---r~pvi~Gvg~~~t~~ai~la~~a~~~ 95 (291)
T 3a5f_A 25 SELIEWHIKSKTDAIIVCGTTGE-AT-----TMTETERKETIKFVIDKVNK---RIPVIAGTGSNNTAASIAMSKWAESI 95 (291)
T ss_dssp HHHHHHHHHTTCCEEEESSGGGT-GG-----GSCHHHHHHHHHHHHHHHTT---SSCEEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEECccccC-hh-----hCCHHHHHHHHHHHHHHhCC---CCcEEEeCCcccHHHHHHHHHHHHhc
Confidence 55667777789998765322212 11 23788888999888876434 23578898 56888888999999999
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+-+
T Consensus 96 Gadavlv 102 (291)
T 3a5f_A 96 GVDGLLV 102 (291)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9997644
No 91
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=83.89 E-value=1.9 Score=35.90 Aligned_cols=133 Identities=13% Similarity=0.166 Sum_probs=78.2
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeee--------cCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEc-CCCcCcHHHHHHH
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSV--------NRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILI-PDFRNQINHVLKI 159 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg--------~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~-~~~~~~~~e~l~~ 159 (293)
..+++++++.+.. -..++|.=- ..-|+ ....+.+.++++.+++. +++++++. |+ .+.++.
T Consensus 75 ~t~emi~ia~~~k---P~~vtLVPE~r~e~TTegGldv-~~~~~~l~~~i~~L~~~--GIrVSLFIDpd-----~~qi~a 143 (243)
T 1m5w_A 75 VTEEMLAIAVETK---PHFCCLVPEKRQEVTTEGGLDV-AGQRDKMRDACKRLADA--GIQVSLFIDAD-----EEQIKA 143 (243)
T ss_dssp SSHHHHHHHHHHC---CSEEEECCCCSSCSSCCSCCCS-GGGHHHHHHHHHHHHHT--TCEEEEEECSC-----HHHHHH
T ss_pred CCHHHHHHHHHcC---CCEEEECCCCCCCcCCCcchhH-HhhHHHHHHHHHHHHHC--CCEEEEEeCCC-----HHHHHH
Confidence 3567777766552 234444311 01112 13467889999999886 67888876 32 778999
Q ss_pred HHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhC-CCCEEE
Q psy2895 160 FKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNH-NIDILT 238 (293)
Q Consensus 160 l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l-~~~~i~ 238 (293)
-++.|.+++-+.-..--+.+....+...++.+.++.+.+++. |+.+++ |+|=|.+.+... ..+ ++..++
T Consensus 144 A~~~GA~~IELhTG~Ya~a~~~~~~~~el~~i~~aa~~A~~l--GL~VnA----GHgL~y~Nv~~i----a~ip~i~Eln 213 (243)
T 1m5w_A 144 AAEVGAPFIEIHTGCYADAKTDAEQAQELARIAKAATFAASL--GLKVNA----GHGLTYHNVKAI----AAIPEMHELN 213 (243)
T ss_dssp HHHTTCSEEEEECHHHHHCCSHHHHHHHHHHHHHHHHHHHHT--TCEEEE----ESSCCTTTHHHH----HTCTTEEEEE
T ss_pred HHHhCcCEEEEechhhhcCCCchhHHHHHHHHHHHHHHHHHc--CCEEec----CCCCCHHHHHHH----hhCCCCeEEc
Confidence 999999998764322111111000112466777888888888 987765 566555544333 233 455666
Q ss_pred eecC
Q psy2895 239 IGQY 242 (293)
Q Consensus 239 i~~~ 242 (293)
|..+
T Consensus 214 IGHa 217 (243)
T 1m5w_A 214 IGHA 217 (243)
T ss_dssp ECHH
T ss_pred cCHH
Confidence 6533
No 92
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=83.87 E-value=18 Score=30.40 Aligned_cols=84 Identities=23% Similarity=0.211 Sum_probs=52.6
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCC---------------ChhHHHHHHHHHHhhCCCcEEEEEc--C-CC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDG---------------GSSHFVSCIKHIRKLSTKIKIEILI--P-DF 149 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~---------------~~~~~~~ll~~i~~~~~~~~i~~~~--~-~~ 149 (293)
.+.++..+.++.+.+.|+..|.+..-..+++-+. ......++++.+++.++++.+.+++ + -+
T Consensus 28 p~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~ 107 (268)
T 1qop_A 28 PGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVF 107 (268)
T ss_dssp SCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHH
Confidence 4567888999999999999887743211111111 0233457889998874455566543 2 11
Q ss_pred cCcHHHHHHHHHHcCCCeeeec
Q psy2895 150 RNQINHVLKIFKQALPDVLNHN 171 (293)
Q Consensus 150 ~~~~~e~l~~l~~aG~~~i~~~ 171 (293)
..-.+..++.+.++|++.+.+.
T Consensus 108 ~~g~~~~~~~~~~aGadgii~~ 129 (268)
T 1qop_A 108 NNGIDAFYARCEQVGVDSVLVA 129 (268)
T ss_dssp TTCHHHHHHHHHHHTCCEEEET
T ss_pred HhhHHHHHHHHHHcCCCEEEEc
Confidence 1112578889999999988764
No 93
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=83.80 E-value=13 Score=30.64 Aligned_cols=76 Identities=9% Similarity=0.100 Sum_probs=49.7
Q ss_pred hhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeee
Q psy2895 90 IEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLN 169 (293)
Q Consensus 90 ~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~ 169 (293)
.++..+.++.+.+.|++.+.+...+.. ........++++.+++.. ++.+-+. .++.+ .+.++.+.++|+|.+.
T Consensus 30 ~~d~~~~a~~~~~~Gad~i~v~d~~~~---~~~~~~~~~~i~~i~~~~-~iPvi~~-Ggi~~--~~~~~~~~~~Gad~V~ 102 (252)
T 1ka9_F 30 AGDPVEAARAYDEAGADELVFLDISAT---HEERAILLDVVARVAERV-FIPLTVG-GGVRS--LEDARKLLLSGADKVS 102 (252)
T ss_dssp TTCHHHHHHHHHHHTCSCEEEEECCSS---TTCHHHHHHHHHHHHTTC-CSCEEEE-SSCCS--HHHHHHHHHHTCSEEE
T ss_pred cCCHHHHHHHHHHcCCCEEEEEcCCcc---ccCccccHHHHHHHHHhC-CCCEEEE-CCcCC--HHHHHHHHHcCCCEEE
Confidence 346777788888889998888754321 112345567788888753 3333332 24444 6778888889999999
Q ss_pred ecc
Q psy2895 170 HNI 172 (293)
Q Consensus 170 ~~l 172 (293)
++-
T Consensus 103 lg~ 105 (252)
T 1ka9_F 103 VNS 105 (252)
T ss_dssp ECH
T ss_pred ECh
Confidence 873
No 94
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=83.60 E-value=7.4 Score=38.00 Aligned_cols=79 Identities=11% Similarity=0.064 Sum_probs=57.5
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEc-C--CCcCcHHHHHHHHHHcC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILI-P--DFRNQINHVLKIFKQAL 164 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~-~--~~~~~~~e~l~~l~~aG 164 (293)
.+++.+++.++.+.+.|+..|.|.--.. ......+.++++.+++..|++.|.+.+ + |+.. .-.+..+ ++|
T Consensus 258 ~~~e~~~~~a~~l~~~Ga~~I~l~DT~G----~~~P~~v~~lV~~lk~~~p~~~I~~H~Hnd~GlAv--ANslaAv-eAG 330 (718)
T 3bg3_A 258 YSLQYYMGLAEELVRAGTHILCIKDMAG----LLKPTACTMLVSSLRDRFPDLPLHIHTHDTSGAGV--AAMLACA-QAG 330 (718)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEECTTS----CCCHHHHHHHHHHHHHHSTTCCEEEECCCTTSCHH--HHHHHHH-HTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCcCC----CcCHHHHHHHHHHHHHhCCCCeEEEEECCCccHHH--HHHHHHH-HhC
Confidence 5789999999999999999988853221 112578899999999988777777765 2 3322 4566666 589
Q ss_pred CCeeeeccc
Q psy2895 165 PDVLNHNIE 173 (293)
Q Consensus 165 ~~~i~~~le 173 (293)
++.+...+.
T Consensus 331 a~~VD~ti~ 339 (718)
T 3bg3_A 331 ADVVDVAAD 339 (718)
T ss_dssp CSEEEEBCG
T ss_pred CCEEEecCc
Confidence 999976543
No 95
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=83.47 E-value=9.7 Score=32.76 Aligned_cols=77 Identities=9% Similarity=0.043 Sum_probs=51.9
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.| .. .-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+++.
T Consensus 31 ~~lv~~li~~Gv~gl~~~GttGE-~~-----~Ls~~Er~~v~~~~~~~~~g---rvpviaGvg~~~t~~ai~la~~a~~~ 101 (297)
T 3flu_A 31 RDLIDWHIENGTDGIVAVGTTGE-SA-----TLSVEEHTAVIEAVVKHVAK---RVPVIAGTGANNTVEAIALSQAAEKA 101 (297)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTT-GG-----GSCHHHHHHHHHHHHHHHTT---SSCEEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEeCccccC-cc-----cCCHHHHHHHHHHHHHHhCC---CCcEEEeCCCcCHHHHHHHHHHHHHc
Confidence 55666777788888765322222 11 23678888888888776323 24567888 56888888888888888
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+-+
T Consensus 102 Gadavlv 108 (297)
T 3flu_A 102 GADYTLS 108 (297)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8887654
No 96
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=83.40 E-value=9.3 Score=32.83 Aligned_cols=77 Identities=9% Similarity=0.075 Sum_probs=49.3
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.| .. .-+.+++.+.++.+.+...| ...+|+|. +.+.++..+..+.+.+.
T Consensus 24 ~~lv~~li~~Gv~gl~~~GttGE-~~-----~Ls~~Er~~v~~~~~~~~~g---rvpviaGvg~~~t~~ai~la~~A~~~ 94 (294)
T 2ehh_A 24 GNLIEFHVDNGTDAILVCGTTGE-SP-----TLTFEEHEKVIEFAVKRAAG---RIKVIAGTGGNATHEAVHLTAHAKEV 94 (294)
T ss_dssp HHHHHHHHTTTCCEEEESSTTTT-GG-----GSCHHHHHHHHHHHHHHHTT---SSEEEEECCCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCEEEECccccC-hh-----hCCHHHHHHHHHHHHHHhCC---CCcEEEecCCCCHHHHHHHHHHHHhc
Confidence 55666667778888765321111 11 22677788888877765333 23467888 55777778888888888
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+-+
T Consensus 95 Gadavlv 101 (294)
T 2ehh_A 95 GADGALV 101 (294)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8886544
No 97
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=83.31 E-value=11 Score=33.25 Aligned_cols=87 Identities=13% Similarity=0.142 Sum_probs=59.8
Q ss_pred HHHHHHHHHcCCCeeeecccc-chHHHhh-cCC--CCCHHHHHHHHHHHHHhCCCceeeEeEEeec--CCCHHHHHHHHH
Q psy2895 154 NHVLKIFKQALPDVLNHNIET-VPRLYKK-VRP--GSDYKHSLNLLKNFKKLYPNILTKSGIMVGL--GENDEEILTVIH 227 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~les-s~~~~~~-i~~--~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~--gEt~ed~~~~l~ 227 (293)
.+.++.+.++|+|.|.++.-+ ...+.+. ... ....+...++++.+++.. ++++..-+-+|. ..+.++..+.++
T Consensus 73 ~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v-~~PV~vKiR~g~~~~~~~~~~~~~a~ 151 (350)
T 3b0p_A 73 AEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV-RVPVTVKMRLGLEGKETYRGLAQSVE 151 (350)
T ss_dssp HHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC-SSCEEEEEESCBTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh-CCceEEEEecCcCccccHHHHHHHHH
Confidence 456677778899998887644 3333322 111 125777888888888864 666655445566 346678888899
Q ss_pred HHHhCCCCEEEeec
Q psy2895 228 DMRNHNIDILTIGQ 241 (293)
Q Consensus 228 ~l~~l~~~~i~i~~ 241 (293)
.+.+.|++.+.++.
T Consensus 152 ~l~~aG~d~I~V~~ 165 (350)
T 3b0p_A 152 AMAEAGVKVFVVHA 165 (350)
T ss_dssp HHHHTTCCEEEEEC
T ss_pred HHHHcCCCEEEEec
Confidence 99999999998863
No 98
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=82.97 E-value=6.8 Score=32.33 Aligned_cols=75 Identities=11% Similarity=0.132 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeec
Q psy2895 92 EPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHN 171 (293)
Q Consensus 92 ei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~ 171 (293)
+..+.++.+.+.|++.+++..-+.. ... .... +.++.+++.. ++.+.+ .+.+.+ .+.++.+.++|+|.+.++
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~-~~~--~~~~-~~i~~i~~~~-~ipv~v--~ggI~~-~~~~~~~l~~Gad~V~lg 104 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAA-FGT--GDNR-ALIAEVAQAM-DIKVEL--SGGIRD-DDTLAAALATGCTRVNLG 104 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHH-HTS--CCCH-HHHHHHHHHC-SSEEEE--ESSCCS-HHHHHHHHHTTCSEEEEC
T ss_pred CHHHHHHHHHHcCCCEEEEecCchh-hcC--CChH-HHHHHHHHhc-CCcEEE--ECCcCC-HHHHHHHHHcCCCEEEEC
Confidence 6777788888899999988753211 000 1123 7788887754 333333 332333 677888889999999987
Q ss_pred ccc
Q psy2895 172 IET 174 (293)
Q Consensus 172 les 174 (293)
.+.
T Consensus 105 ~~~ 107 (244)
T 1vzw_A 105 TAA 107 (244)
T ss_dssp HHH
T ss_pred chH
Confidence 543
No 99
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=82.94 E-value=25 Score=31.15 Aligned_cols=128 Identities=10% Similarity=0.068 Sum_probs=80.4
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCC-cCcHHHHHHHHHHcC
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDF-RNQINHVLKIFKQAL 164 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~-~~~~~e~l~~l~~aG 164 (293)
...+.+..++.+.++.+.|+.-|-++-.+ +.-.+.+..|++..+ +.+-. |+ .+ ...+..-.++|
T Consensus 41 ~T~D~~atv~Qi~~l~~aG~diVRvavp~---------~~~a~al~~I~~~~~-vPlva---DiHf~--~~lal~a~e~G 105 (366)
T 3noy_A 41 KTHDVEATLNQIKRLYEAGCEIVRVAVPH---------KEDVEALEEIVKKSP-MPVIA---DIHFA--PSYAFLSMEKG 105 (366)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCEEEEECCS---------HHHHHHHHHHHHHCS-SCEEE---ECCSC--HHHHHHHHHTT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCCCC---------hHHHHHHHHHHhcCC-CCEEE---eCCCC--HHHHHHHHHhC
Confidence 35788999999999999999988875321 234577788887642 23322 32 22 33444445688
Q ss_pred CCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEee---------c-CCCHHHHH----HHHHHHH
Q psy2895 165 PDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVG---------L-GENDEEIL----TVIHDMR 230 (293)
Q Consensus 165 ~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG---------~-gEt~ed~~----~~l~~l~ 230 (293)
++.+.++.- - +. +.+++.+.++.++++ |+++..++=-| + +.|.+.+. ++++.++
T Consensus 106 ~dklRINPG----N---ig---~~~~~~~vv~~ak~~--~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e 173 (366)
T 3noy_A 106 VHGIRINPG----N---IG---KEEIVREIVEEAKRR--GVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFE 173 (366)
T ss_dssp CSEEEECHH----H---HS---CHHHHHHHHHHHHHH--TCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred CCeEEECCc----c---cC---chhHHHHHHHHHHHc--CCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 888776521 1 11 345567788888888 88776665544 2 25655544 4456677
Q ss_pred hCCCCEEEee
Q psy2895 231 NHNIDILTIG 240 (293)
Q Consensus 231 ~l~~~~i~i~ 240 (293)
+++++.+-++
T Consensus 174 ~~gf~~iviS 183 (366)
T 3noy_A 174 KWGFTNYKVS 183 (366)
T ss_dssp HTTCCCEEEE
T ss_pred hCCCCeEEEe
Confidence 8888755443
No 100
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=82.91 E-value=8.8 Score=32.88 Aligned_cols=77 Identities=6% Similarity=0.012 Sum_probs=49.1
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.|-. .-+.+++.+.++.+.+...| ...+|+|. +.+.++..+..+.+++.
T Consensus 24 ~~lv~~li~~Gv~gl~~~GttGE~~------~Ls~~Er~~v~~~~~~~~~g---r~pviaGvg~~~t~~ai~la~~a~~~ 94 (289)
T 2yxg_A 24 EENINFLIENGVSGIVAVGTTGESP------TLSHEEHKKVIEKVVDVVNG---RVQVIAGAGSNCTEEAIELSVFAEDV 94 (289)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTTGG------GSCHHHHHHHHHHHHHHHTT---SSEEEEECCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECccccChh------hCCHHHHHHHHHHHHHHhCC---CCcEEEeCCCCCHHHHHHHHHHHHhc
Confidence 5566667777888876532111111 22677788888777765333 23467788 55777778888888888
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+-+
T Consensus 95 Gadavlv 101 (289)
T 2yxg_A 95 GADAVLS 101 (289)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8886544
No 101
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=82.82 E-value=9 Score=33.12 Aligned_cols=77 Identities=17% Similarity=0.173 Sum_probs=51.6
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.| . ..-+.+++.+.++.+.+...| ...+|+|. +.+.++..+..+.+.+.
T Consensus 40 ~~lv~~li~~Gv~gl~v~GttGE-~-----~~Ls~~Er~~v~~~~~~~~~g---rvpviaGvg~~st~~ai~la~~A~~~ 110 (304)
T 3cpr_A 40 REVAAYLVDKGLDSLVLAGTTGE-S-----PTTTAAEKLELLKAVREEVGD---RAKLIAGVGTNNTRTSVELAEAAASA 110 (304)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTT-T-----TTSCHHHHHHHHHHHHHHHTT---TSEEEEECCCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEECccccC-h-----hhCCHHHHHHHHHHHHHHhCC---CCcEEecCCCCCHHHHHHHHHHHHhc
Confidence 56667777788888765321111 1 133778888888887775333 13467888 56778888888888888
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+-+
T Consensus 111 Gadavlv 117 (304)
T 3cpr_A 111 GADGLLV 117 (304)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8887644
No 102
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=82.81 E-value=9.4 Score=32.81 Aligned_cols=77 Identities=12% Similarity=-0.037 Sum_probs=43.3
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.| .. .-+.+++.+.++.+.+...| ...+|+|. +.+.++..+..+.+.++
T Consensus 27 ~~lv~~li~~Gv~gl~~~GttGE-~~-----~Ls~~Er~~v~~~~~~~~~g---r~pviaGvg~~~t~~ai~la~~A~~~ 97 (294)
T 3b4u_A 27 IAHARRCLSNGCDSVTLFGTTGE-GC-----SVGSRERQAILSSFIAAGIA---PSRIVTGVLVDSIEDAADQSAEALNA 97 (294)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTT-GG-----GSCHHHHHHHHHHHHHTTCC---GGGEEEEECCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEECccccC-hh-----hCCHHHHHHHHHHHHHHhCC---CCcEEEeCCCccHHHHHHHHHHHHhc
Confidence 45555566667777654221111 11 22566777777776665322 23456666 45666667777777777
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+-+
T Consensus 98 Gadavlv 104 (294)
T 3b4u_A 98 GARNILL 104 (294)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 7776543
No 103
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=82.67 E-value=5.2 Score=34.86 Aligned_cols=77 Identities=10% Similarity=0.140 Sum_probs=51.7
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHN 233 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~ 233 (293)
...++.+.+.|++.+.+.--+.| .. .-+.+++.+.++.+.+...| ..-+|+|.|.+.++..+..+.+.++|
T Consensus 36 ~~lv~~li~~Gv~Gl~v~GtTGE-~~-----~Ls~eEr~~v~~~~v~~~~g---rvpViaGvg~~t~~ai~la~~A~~~G 106 (316)
T 3e96_A 36 KETVDRIVDNGIDVIVPCGNTSE-FY-----ALSLEEAKEEVRRTVEYVHG---RALVVAGIGYATSTAIELGNAAKAAG 106 (316)
T ss_dssp HHHHHHHHTTTCCEECTTSGGGT-GG-----GSCHHHHHHHHHHHHHHHTT---SSEEEEEECSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEeCccccC-cc-----cCCHHHHHHHHHHHHHHhCC---CCcEEEEeCcCHHHHHHHHHHHHhcC
Confidence 56677777788888765322212 11 23788888888887776333 13467777558888888888888888
Q ss_pred CCEEEe
Q psy2895 234 IDILTI 239 (293)
Q Consensus 234 ~~~i~i 239 (293)
++-+-+
T Consensus 107 adavlv 112 (316)
T 3e96_A 107 ADAVMI 112 (316)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 887655
No 104
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=82.66 E-value=8.6 Score=33.24 Aligned_cols=77 Identities=9% Similarity=0.034 Sum_probs=54.1
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.| .. .-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.++++
T Consensus 39 ~~lv~~li~~Gv~gi~v~GttGE-~~-----~Lt~~Er~~v~~~~~~~~~g---rvpviaGvg~~~t~~ai~la~~a~~~ 109 (304)
T 3l21_A 39 ARLANHLVDQGCDGLVVSGTTGE-SP-----TTTDGEKIELLRAVLEAVGD---RARVIAGAGTYDTAHSIRLAKACAAE 109 (304)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTT-GG-----GSCHHHHHHHHHHHHHHHTT---TSEEEEECCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeCccccc-hh-----hCCHHHHHHHHHHHHHHhCC---CCeEEEeCCCCCHHHHHHHHHHHHHc
Confidence 56777777889998765322222 11 23788888888888776333 23568888 67888888999999999
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+-+
T Consensus 110 Gadavlv 116 (304)
T 3l21_A 110 GAHGLLV 116 (304)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9987655
No 105
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=82.57 E-value=14 Score=31.16 Aligned_cols=84 Identities=13% Similarity=0.141 Sum_probs=43.4
Q ss_pred HHHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEe-----ecCC-C-------H
Q psy2895 153 INHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMV-----GLGE-N-------D 219 (293)
Q Consensus 153 ~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~iv-----G~gE-t-------~ 219 (293)
+++.++.++++|++.+.+........... ...+.++..+.-+.+.+. |+.+.+.-.. .++. . .
T Consensus 32 ~~~~l~~~~~~G~~~iEl~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~--gl~i~~~~~~~~~~~~l~~~d~~~r~~~~ 107 (295)
T 3cqj_A 32 WLERLQLAKTLGFDFVEMSVDETDERLSR--LDWSREQRLALVNAIVET--GVRVPSMCLSAHRRFPLGSEDDAVRAQGL 107 (295)
T ss_dssp HHHHHHHHHHTTCSEEEEECCSSHHHHGG--GGCCHHHHHHHHHHHHHH--CCEEEEEEEGGGGTSCTTCSSHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEecCCcccccCc--ccCCHHHHHHHHHHHHHc--CCeEEEEecCcccCCCCCCCCHHHHHHHH
Confidence 36677777777777776654332111100 122344455555566666 7765432111 1211 1 2
Q ss_pred HHHHHHHHHHHhCCCCEEEee
Q psy2895 220 EEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 220 ed~~~~l~~l~~l~~~~i~i~ 240 (293)
+.+.+.++.+.++|...+.+.
T Consensus 108 ~~~~~~i~~A~~lG~~~v~~~ 128 (295)
T 3cqj_A 108 EIMRKAIQFAQDVGIRVIQLA 128 (295)
T ss_dssp HHHHHHHHHHHHHTCCEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEC
Confidence 446666666777777776553
No 106
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=82.41 E-value=9.8 Score=32.66 Aligned_cols=77 Identities=10% Similarity=0.027 Sum_probs=49.3
Q ss_pred HHHHHHHHH-cCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHh
Q psy2895 154 NHVLKIFKQ-ALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRN 231 (293)
Q Consensus 154 ~e~l~~l~~-aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~ 231 (293)
...++.+.+ .|++.+.+.--+.| .. .-+.+++.+.++.+.+...| ...+|+|. +.+.++..+..+.+.+
T Consensus 27 ~~lv~~li~~~Gv~gl~~~GttGE-~~-----~Ls~~Er~~v~~~~~~~~~g---rvpviaGvg~~~t~~ai~la~~a~~ 97 (293)
T 1f6k_A 27 RQIIRHNIDKMKVDGLYVGGSTGE-NF-----MLSTEEKKEIFRIAKDEAKD---QIALIAQVGSVNLKEAVELGKYATE 97 (293)
T ss_dssp HHHHHHHHHTSCCSEEEESSGGGT-GG-----GSCHHHHHHHHHHHHHHHTT---SSEEEEECCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCcEEEeCccccc-hh-----hCCHHHHHHHHHHHHHHhCC---CCeEEEecCCCCHHHHHHHHHHHHh
Confidence 556666777 78888765321111 11 22677788888777765333 23467788 5577777888888888
Q ss_pred CCCCEEEe
Q psy2895 232 HNIDILTI 239 (293)
Q Consensus 232 l~~~~i~i 239 (293)
+|++-+-+
T Consensus 98 ~Gadavlv 105 (293)
T 1f6k_A 98 LGYDCLSA 105 (293)
T ss_dssp HTCSEEEE
T ss_pred cCCCEEEE
Confidence 88886544
No 107
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=82.28 E-value=19 Score=29.51 Aligned_cols=124 Identities=13% Similarity=0.212 Sum_probs=71.8
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCC-CcEEEEEcCCCcCcHHHHHHHHHHcCCCe
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLST-KIKIEILIPDFRNQINHVLKIFKQALPDV 167 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~-~~~i~~~~~~~~~~~~e~l~~l~~aG~~~ 167 (293)
+...+.+.++.+.+.|++.+.+---+.+..+. ...-.++++.+++... .+.+++++.+- +..++.+.++|.|.
T Consensus 15 D~~~l~~~i~~~~~~Gad~ihldi~DG~fvp~--~~~g~~~v~~lr~~~~~~~~vhlmv~dp----~~~i~~~~~aGadg 88 (230)
T 1tqj_A 15 DFSRLGEEIKAVDEAGADWIHVDVMDGRFVPN--ITIGPLIVDAIRPLTKKTLDVHLMIVEP----EKYVEDFAKAGADI 88 (230)
T ss_dssp CGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSC--BCBCHHHHHHHGGGCCSEEEEEEESSSG----GGTHHHHHHHTCSE
T ss_pred CHhHHHHHHHHHHHcCCCEEEEEEEecCCCcc--hhhhHHHHHHHHhhcCCcEEEEEEccCH----HHHHHHHHHcCCCE
Confidence 45667778888888899977664433221222 1122377888887642 24555665321 33578888899999
Q ss_pred eeeccc--cchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 168 LNHNIE--TVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 168 i~~~le--ss~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
+++..+ ..+ ...+.++.+++. |+.+.. .+. ..|..+..+ .+.+ ++|++.+.
T Consensus 89 v~vh~e~~~~~-------------~~~~~~~~i~~~--g~~~gv--~~~-p~t~~e~~~---~~~~-~~D~v~~m 141 (230)
T 1tqj_A 89 ISVHVEHNASP-------------HLHRTLCQIREL--GKKAGA--VLN-PSTPLDFLE---YVLP-VCDLILIM 141 (230)
T ss_dssp EEEECSTTTCT-------------THHHHHHHHHHT--TCEEEE--EEC-TTCCGGGGT---TTGG-GCSEEEEE
T ss_pred EEECcccccch-------------hHHHHHHHHHHc--CCcEEE--EEe-CCCcHHHHH---HHHh-cCCEEEEE
Confidence 998876 321 233566677777 775432 222 234433322 1122 57788776
No 108
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=82.23 E-value=21 Score=31.23 Aligned_cols=83 Identities=13% Similarity=0.053 Sum_probs=52.1
Q ss_pred CChhHHHHHHHHHHHCCCcEEEE--eeec-----CCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHH
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVI--TSVN-----RDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIF 160 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l--~gg~-----~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l 160 (293)
-+.+++.+.++++.+.|...|-+ .|+- ++..+..+.+.+.++++..++. ++.+.+...+ .+.++..
T Consensus 164 ~~~~~~~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~--g~~v~~H~~~-----~~~i~~~ 236 (403)
T 3gnh_A 164 DSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMA--GIKVAAHAHG-----ASGIREA 236 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHT--TCEEEEEECS-----HHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEeCC-----HHHHHHH
Confidence 45789999999999989886644 3331 1111223467888888888876 4455554321 3345666
Q ss_pred HHcCCCeeeeccccchH
Q psy2895 161 KQALPDVLNHNIETVPR 177 (293)
Q Consensus 161 ~~aG~~~i~~~less~~ 177 (293)
.++|++.+.|..-.+++
T Consensus 237 ~~~g~~~i~H~~~~~~~ 253 (403)
T 3gnh_A 237 VRAGVDTIEHASLVDDE 253 (403)
T ss_dssp HHTTCSEEEECTTCCHH
T ss_pred HHhCCCEEecCCcCCHH
Confidence 67898888776533333
No 109
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=82.17 E-value=31 Score=35.64 Aligned_cols=137 Identities=11% Similarity=0.096 Sum_probs=81.5
Q ss_pred CChhHHHHHHHHHHHC--CCcEEEEeeecC-----CCCCCCChhHHHHHHHHHHhhCCCcEEEEEc---C--CCc---Cc
Q psy2895 88 LDIEEPKKIAYTINKL--KLNYVVITSVNR-----DDLHDGGSSHFVSCIKHIRKLSTKIKIEILI---P--DFR---NQ 152 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~--G~~~i~l~gg~~-----~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~---~--~~~---~~ 152 (293)
++.++.+++++.+.+. |+..+-..||.. +.+.. .=.+.++.+++..|+..+.+.. + ++. ++
T Consensus 552 ~~~~~kl~ia~~L~~~~~G~~~lE~~Gga~~e~~~~~~~e----~~~e~l~~l~~~~~~~~~~~l~R~~n~vgy~~~pd~ 627 (1150)
T 3hbl_A 552 VRTKDMINIASKTADVFKDGFSLEMWGGATFDVAYNFLKE----NPWERLERLRKAIPNVLFQMLLRASNAVGYKNYPDN 627 (1150)
T ss_dssp CCHHHHHHHHHHHHHHTTTCSEEEEEETTHHHHHHHTSCC----CHHHHHHHHHHHCCSSEEEEEEETTTBTCSSCCCHH
T ss_pred CCHHHHHHHHHHHHHhhCCCcEEeecCCceEEecccccCC----CHHHHHHHHHHhCCCCeEEEEeccccccccccCCch
Confidence 7899999999999987 999887777652 11211 1225567777777777766644 1 221 11
Q ss_pred -HHHHHHHHHHcCCCeeeeccccc--hHHHhh---------------------cC----CCCCHHHHHHHHHHHHHhCCC
Q psy2895 153 -INHVLKIFKQALPDVLNHNIETV--PRLYKK---------------------VR----PGSDYKHSLNLLKNFKKLYPN 204 (293)
Q Consensus 153 -~~e~l~~l~~aG~~~i~~~less--~~~~~~---------------------i~----~~~~~e~~l~~i~~~~~~~pg 204 (293)
+.+.++...++|++.+.+..-.+ ....+. +. +.++.+.+++.++.+.++ |
T Consensus 628 v~~~~v~~a~~~Gvd~irif~~~sd~~~~~~~~~~~~e~g~~~~~~i~~~~~~~~pe~~~~~~~~~~~~~a~~~~~~--G 705 (1150)
T 3hbl_A 628 VIHKFVQESAKAGIDVFRIFDSLNWVDQMKVANEAVQEAGKISEGTICYTGDILNPERSNIYTLEYYVKLAKELERE--G 705 (1150)
T ss_dssp HHHHHHHHHHHTTCCEEEEECTTCCGGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTTCSSSSHHHHHHHHHHHHHT--T
T ss_pred hHHHHHHHHHhCCcCEEEEEeeCCHHHHHHHHHHHHHHHhhheeEEEeecccccChhhcCCCCHHHHHHHHHHHHHc--C
Confidence 25567888889999987743222 111100 00 114566677777777777 6
Q ss_pred ce-eeEeEEeecCCCHHHHHHHHHHHHh
Q psy2895 205 IL-TKSGIMVGLGENDEEILTVIHDMRN 231 (293)
Q Consensus 205 i~-~~~~~ivG~gEt~ed~~~~l~~l~~ 231 (293)
.. ++.-=++| .-++.++.+.+..+++
T Consensus 706 a~~i~l~Dt~G-~~~P~~~~~lv~~l~~ 732 (1150)
T 3hbl_A 706 FHILAIKDMAG-LLKPKAAYELIGELKS 732 (1150)
T ss_dssp CSEEEEEETTC-CCCHHHHHHHHHHHHH
T ss_pred CCeeeEcCccC-CCCHHHHHHHHHHHHH
Confidence 63 33222344 3456666677666654
No 110
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=81.97 E-value=8.8 Score=32.24 Aligned_cols=15 Identities=7% Similarity=0.027 Sum_probs=6.7
Q ss_pred HHHHHHHcCCCeeee
Q psy2895 156 VLKIFKQALPDVLNH 170 (293)
Q Consensus 156 ~l~~l~~aG~~~i~~ 170 (293)
.++.++++|.+.+.+
T Consensus 26 ~l~~~~~~G~~~vEl 40 (290)
T 3tva_A 26 HLEVAQDLKVPTVQV 40 (290)
T ss_dssp CHHHHHHTTCSEEEE
T ss_pred HHHHHHHcCCCEEEe
Confidence 344444444444443
No 111
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=81.87 E-value=9.4 Score=32.96 Aligned_cols=77 Identities=10% Similarity=0.028 Sum_probs=49.7
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.|- . .-+.+++.+.++.+.+...| ..-+|+|. ..+.++..+..+.+.+.
T Consensus 35 ~~lv~~li~~Gv~Gl~v~GtTGE~-~-----~Ls~eEr~~v~~~~~~~~~g---rvpViaGvg~~~t~~ai~la~~A~~~ 105 (303)
T 2wkj_A 35 RRLVQFNIQQGIDGLYVGGSTGEA-F-----VQSLSEREQVLEIVAEEAKG---KIKLIAHVGCVSTAESQQLAASAKRY 105 (303)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTTG-G-----GSCHHHHHHHHHHHHHHHTT---TSEEEEECCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECeeccCh-h-----hCCHHHHHHHHHHHHHHhCC---CCcEEEecCCCCHHHHHHHHHHHHhC
Confidence 556666777888887653211111 1 22677888888877765323 23467788 45777778888888888
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+-+
T Consensus 106 Gadavlv 112 (303)
T 2wkj_A 106 GFDAVSA 112 (303)
T ss_dssp TCSEEEE
T ss_pred CCCEEEe
Confidence 8886544
No 112
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=81.86 E-value=11 Score=32.71 Aligned_cols=77 Identities=8% Similarity=0.109 Sum_probs=54.6
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.| .. .-+.+++.+.++.+.+...| ..-+|+|. ..+.++..+..+.+++.
T Consensus 47 ~~lv~~li~~Gv~Gl~v~GtTGE-~~-----~Ls~~Er~~v~~~~v~~~~g---rvpViaGvg~~st~eai~la~~A~~~ 117 (314)
T 3qze_A 47 AKLVDFHLQEGTNAIVAVGTTGE-SA-----TLDVEEHIQVIRRVVDQVKG---RIPVIAGTGANSTREAVALTEAAKSG 117 (314)
T ss_dssp HHHHHHHHHHTCCEEEESSGGGT-GG-----GCCHHHHHHHHHHHHHHHTT---SSCEEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEECccccC-hh-----hCCHHHHHHHHHHHHHHhCC---CCcEEEeCCCcCHHHHHHHHHHHHHc
Confidence 56677777889998766322222 11 23788888888888776333 24578888 56888888999999999
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+-+
T Consensus 118 Gadavlv 124 (314)
T 3qze_A 118 GADACLL 124 (314)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9997655
No 113
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=81.86 E-value=23 Score=30.05 Aligned_cols=141 Identities=14% Similarity=0.158 Sum_probs=76.1
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCC---------------ChhHHHHHHHHHHhhCCCcEEEEEc---CCCc
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRDDLHDG---------------GSSHFVSCIKHIRKLSTKIKIEILI---PDFR 150 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~---------------~~~~~~~ll~~i~~~~~~~~i~~~~---~~~~ 150 (293)
+.+.-.+.++.+.+.|+.-|-|.--..+++.+. +.+.+.++++++++.++++.+-+++ |-+.
T Consensus 32 ~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~ 111 (271)
T 3nav_A 32 NPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYA 111 (271)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHH
Confidence 677888888999999998766542211111111 1235677888888765555555543 2111
Q ss_pred CcHHHHHHHHHHcCCCeeee---ccccchHHHhhcC----------CCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-C
Q psy2895 151 NQINHVLKIFKQALPDVLNH---NIETVPRLYKKVR----------PGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-G 216 (293)
Q Consensus 151 ~~~~e~l~~l~~aG~~~i~~---~less~~~~~~i~----------~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-g 216 (293)
--++..++.++++|+|.+-+ ++|..+++.+..+ ...+.+++++.+. +.-+|+-. .--..|. |
T Consensus 112 ~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~---~~~~gfiY-~vs~~GvTG 187 (271)
T 3nav_A 112 RGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVA---QLGKGYTY-LLSRAGVTG 187 (271)
T ss_dssp TCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHH---HHCCSCEE-ECCCC----
T ss_pred HhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHH---HHCCCeEE-EEeccCCCC
Confidence 11267899999999999755 3443333332221 1223444444333 33336622 1112333 3
Q ss_pred C---CHHHHHHHHHHHHhCC
Q psy2895 217 E---NDEEILTVIHDMRNHN 233 (293)
Q Consensus 217 E---t~ed~~~~l~~l~~l~ 233 (293)
. ..+++.+.++.+++..
T Consensus 188 ~~~~~~~~~~~~v~~vr~~~ 207 (271)
T 3nav_A 188 AETKANMPVHALLERLQQFD 207 (271)
T ss_dssp ----CCHHHHHHHHHHHHTT
T ss_pred cccCCchhHHHHHHHHHHhc
Confidence 2 3456778888888764
No 114
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=81.80 E-value=10 Score=32.58 Aligned_cols=77 Identities=10% Similarity=0.002 Sum_probs=50.9
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.| .. .-+.+++.+.++.+.+...| ...+|+|. +.+.++..+..+.+.+.
T Consensus 24 ~~lv~~li~~Gv~gl~~~GttGE-~~-----~Ls~~Er~~v~~~~~~~~~g---r~pviaGvg~~~t~~ai~la~~A~~~ 94 (292)
T 2vc6_A 24 HDLVEWQIEEGSFGLVPCGTTGE-SP-----TLSKSEHEQVVEITIKTANG---RVPVIAGAGSNSTAEAIAFVRHAQNA 94 (292)
T ss_dssp HHHHHHHHHTTCSEEETTSGGGT-GG-----GSCHHHHHHHHHHHHHHHTT---SSCBEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEECccccC-hh-----hCCHHHHHHHHHHHHHHhCC---CCcEEEecCCccHHHHHHHHHHHHHc
Confidence 56667777788888764321111 11 23778888888887775333 23467888 56778888888888888
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+-+
T Consensus 95 Gadavlv 101 (292)
T 2vc6_A 95 GADGVLI 101 (292)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8887644
No 115
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=81.80 E-value=10 Score=32.84 Aligned_cols=77 Identities=10% Similarity=0.066 Sum_probs=50.7
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.| .. .-+.+++.+.++.+.+...| ...+|+|. +.+.++..+..+.+++.
T Consensus 36 ~~lv~~li~~Gv~gl~v~GtTGE-~~-----~Ls~eEr~~vi~~~~~~~~g---rvpViaGvg~~st~~ai~la~~A~~~ 106 (306)
T 1o5k_A 36 ERLVRYQLENGVNALIVLGTTGE-SP-----TVNEDEREKLVSRTLEIVDG---KIPVIVGAGTNSTEKTLKLVKQAEKL 106 (306)
T ss_dssp HHHHHHHHHTTCCEEEESSGGGT-GG-----GCCHHHHHHHHHHHHHHHTT---SSCEEEECCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeCccccc-hh-----hCCHHHHHHHHHHHHHHhCC---CCeEEEcCCCccHHHHHHHHHHHHhc
Confidence 56667777788888765321111 11 23677888888887765333 23567888 55778888888888888
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+-+
T Consensus 107 Gadavlv 113 (306)
T 1o5k_A 107 GANGVLV 113 (306)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8886544
No 116
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=81.79 E-value=35 Score=32.07 Aligned_cols=141 Identities=15% Similarity=0.101 Sum_probs=84.0
Q ss_pred CC-ChhHHHHHHHHHHHCC-----CcEEEEeeec-CCCCCC----CChhHHHHHHHHHHhh----CCCcEEEEEcCCCcC
Q psy2895 87 PL-DIEEPKKIAYTINKLK-----LNYVVITSVN-RDDLHD----GGSSHFVSCIKHIRKL----STKIKIEILIPDFRN 151 (293)
Q Consensus 87 ~~-~~eei~~~~~~~~~~G-----~~~i~l~gg~-~~~l~~----~~~~~~~~ll~~i~~~----~~~~~i~~~~~~~~~ 151 (293)
.. +.+.+++.++++.+.| +.-|-+.|.. .|.... .+.+++..+++.+++. ..++.|.+ |+..
T Consensus 244 ~~~~~~~al~~a~~mv~~G~~~~~AdIIDIGgeSTRPGa~~vs~eEEl~RvvpvI~~i~~~~~~~~~~vpISI---DT~~ 320 (545)
T 2bmb_A 244 HFADIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIRRSIPLIKAIRESTELPQDKVILSI---DTYR 320 (545)
T ss_dssp TTTCHHHHHHHHHHHHHHHHTTCSCEEEEEECSCCSTTCCCCCHHHHHHHHHHHHHHHHHCSSSCGGGEEEEE---ECCC
T ss_pred CcCCHHHHHHHHHHHHHcCCCCCCceEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEE---eCCc
Confidence 45 8999999999999999 8877765532 121111 1245677777887651 12334444 3233
Q ss_pred cHHHHHHHHHHcCCCeee-ecccc-chHHHhh-----------cC-CCC--C------H---------------------
Q psy2895 152 QINHVLKIFKQALPDVLN-HNIET-VPRLYKK-----------VR-PGS--D------Y--------------------- 188 (293)
Q Consensus 152 ~~~e~l~~l~~aG~~~i~-~~les-s~~~~~~-----------i~-~~~--~------~--------------------- 188 (293)
.+++++--++|.+.|+ ++... .+++++. |+ ++. + +
T Consensus 321 --a~VaeaAl~aGadIINDVsg~~~d~~m~~vva~~~~~~vVlmH~rG~p~tm~~~~~y~~~~~~~~~~~e~~~~~~~~~ 398 (545)
T 2bmb_A 321 --SNVAKEAIKVGVDIINDISGGLFDSNMFAVIAENPEICYILSHTRGDISTMNRLAHYENFALGDSIQQEFVHNTDIQQ 398 (545)
T ss_dssp --HHHHHHHHHTTCCEEEETTTTSSCTTHHHHHHTCTTSEEEEECCCSCTTTGGGCCCCSSCTTTTTEEEEEETTEEGGG
T ss_pred --HHHHHHHHHcCCCEEEeCCCCcCChHHHHHHHHhCCCeEEEECCCCCCCCccccccccccccccccchhccccccccc
Confidence 5666666667888775 33221 2222221 11 110 0 1
Q ss_pred ---------------HHHHHHHHHHHHhCCCce---eeEeEEeecCCCHHHHHHHHHHHHhCCC
Q psy2895 189 ---------------KHSLNLLKNFKKLYPNIL---TKSGIMVGLGENDEEILTVIHDMRNHNI 234 (293)
Q Consensus 189 ---------------e~~l~~i~~~~~~~pgi~---~~~~~ivG~gEt~ed~~~~l~~l~~l~~ 234 (293)
+...+.++.+.++ |+. +-.|=-+||+-|.++=.++++.++.+.-
T Consensus 399 ~~~~~~~~~vv~~v~~~l~~~i~~a~~~--GI~~~~IilDPGiGF~Kt~~~nl~lL~~l~~l~~ 460 (545)
T 2bmb_A 399 LDDLKDKTVLIRNVGQEIGERYIKAIDN--GVKRWQILIDPGLGFAKTWKQNLQIIRHIPILKN 460 (545)
T ss_dssp STTHHHHCHHHHHHHHHHHHHHHHHHHT--TCCGGGEEEECCTTSSCCHHHHHHHHHTHHHHTT
T ss_pred cccccccchHHHHHHHHHHHHHHHHHHc--CCCHHHEEEeCCCCcccChHHHHHHHHHHHHHHh
Confidence 1223467778888 994 6677777888898887888877777654
No 117
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=81.78 E-value=9.2 Score=33.73 Aligned_cols=77 Identities=10% Similarity=0.040 Sum_probs=53.7
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.|-. .-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.++
T Consensus 55 ~~lv~~li~~Gv~Gl~v~GtTGE~~------~Ls~eEr~~vi~~~ve~~~g---rvpViaGvg~~st~eai~la~~A~~~ 125 (343)
T 2v9d_A 55 AALIDDLIKAGVDGLFFLGSGGEFS------QLGAEERKAIARFAIDHVDR---RVPVLIGTGGTNARETIELSQHAQQA 125 (343)
T ss_dssp HHHHHHHHHTTCSCEEESSTTTTGG------GSCHHHHHHHHHHHHHHHTT---SSCEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeCccccChh------hCCHHHHHHHHHHHHHHhCC---CCcEEEecCCCCHHHHHHHHHHHHhc
Confidence 5667777788998876532221211 23788888888888876333 23578888 57888888888999999
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+-+
T Consensus 126 Gadavlv 132 (343)
T 2v9d_A 126 GADGIVV 132 (343)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9987654
No 118
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=81.77 E-value=10 Score=31.37 Aligned_cols=96 Identities=10% Similarity=0.199 Sum_probs=60.1
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecC---CCCCCCChhHHHHHHHHHHhhC-CC--cEEEEEcCCCcCcHHHHHHHHH
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNR---DDLHDGGSSHFVSCIKHIRKLS-TK--IKIEILIPDFRNQINHVLKIFK 161 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~---~~l~~~~~~~~~~ll~~i~~~~-~~--~~i~~~~~~~~~~~~e~l~~l~ 161 (293)
.+...+.+.++.+.+.|++.+++-=.+. |.+. .+ .++++.+++.. ++ +.++++..+. ...++.+.
T Consensus 14 ~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~-~G----~~~v~~ir~~~~~~~~~dvhLmv~~p----~~~i~~~~ 84 (228)
T 3ovp_A 14 SDLANLGAECLRMLDSGADYLHLDVMDGHFVPNIT-FG----HPVVESLRKQLGQDPFFDMHMMVSKP----EQWVKPMA 84 (228)
T ss_dssp SCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBC-BC----HHHHHHHHHHHCSSSCEEEEEECSCG----GGGHHHHH
T ss_pred CCchhHHHHHHHHHHcCCCEEEEEecCCCcCcccc-cC----HHHHHHHHHhhCCCCcEEEEEEeCCH----HHHHHHHH
Confidence 4566778888888889999777744443 2232 12 24566666652 33 4566665311 23577788
Q ss_pred HcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCcee
Q psy2895 162 QALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILT 207 (293)
Q Consensus 162 ~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~ 207 (293)
++|+|.+++..|+.+ + ..+.++.+++. |+.+
T Consensus 85 ~aGad~itvH~Ea~~----------~---~~~~i~~i~~~--G~k~ 115 (228)
T 3ovp_A 85 VAGANQYTFHLEATE----------N---PGALIKDIREN--GMKV 115 (228)
T ss_dssp HHTCSEEEEEGGGCS----------C---HHHHHHHHHHT--TCEE
T ss_pred HcCCCEEEEccCCch----------h---HHHHHHHHHHc--CCCE
Confidence 899999999876521 1 34556677777 7754
No 119
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=81.70 E-value=2.5 Score=35.91 Aligned_cols=131 Identities=14% Similarity=0.171 Sum_probs=77.2
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEe----------eecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEc-CCCcCcHHHHH
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVIT----------SVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILI-PDFRNQINHVL 157 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~----------gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~-~~~~~~~~e~l 157 (293)
..+++++++.++. -..++|. ||- |. ....+.+.++++.+++. +++++++. |+ .+.+
T Consensus 103 ~t~emi~ial~~k---P~~vtLVPEkreE~TTegGl--Dv-~~~~~~L~~~i~~L~~~--GIrVSLFIDpd-----~~qI 169 (278)
T 3gk0_A 103 VTPEMLDIACEIR---PHDACLVPEKRSELTTEGGL--DV-VGHFDAVRAACKQLADA--GVRVSLFIDPD-----EAQI 169 (278)
T ss_dssp SSHHHHHHHHHHC---CSEEEECCCSGGGBCSSSSB--CT-TTTHHHHHHHHHHHHHT--TCEEEEEECSC-----HHHH
T ss_pred CCHHHHHHHHHcC---CCEEEECCCCCCCcCCCcch--hh-hccHHHHHHHHHHHHHC--CCEEEEEeCCC-----HHHH
Confidence 3677777776553 2344443 111 12 23467899999999986 67888876 32 6789
Q ss_pred HHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhC-CCCE
Q psy2895 158 KIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNH-NIDI 236 (293)
Q Consensus 158 ~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l-~~~~ 236 (293)
+.-++.|.++|-+.-..--+.+..-.+...++.+.++.+.+++. |+.+++ |+|=|.+.+... ..+ ++..
T Consensus 170 ~aA~~~GAd~IELhTG~YA~a~~~~~~~~el~rl~~aA~~A~~l--GL~VnA----GHGL~y~Nv~~i----a~ip~i~E 239 (278)
T 3gk0_A 170 RAAHETGAPVIELHTGRYADAHDAAEQQREFERIATGVDAGIAL--GLKVNA----GHGLHYTNVQAI----AALPGIAE 239 (278)
T ss_dssp HHHHHHTCSEEEECCHHHHTCSSHHHHHHHHHHHHHHHHHHHHT--TCEEEE----CTTCCTTTHHHH----HTCTTEEE
T ss_pred HHHHHhCcCEEEEecchhhccCCchhHHHHHHHHHHHHHHHHHc--CCEEec----CCCCCHHHHHHH----HhCCCCeE
Confidence 99999999998774221000010000112456677778888888 887765 565555444322 233 3556
Q ss_pred EEeecC
Q psy2895 237 LTIGQY 242 (293)
Q Consensus 237 i~i~~~ 242 (293)
++|..+
T Consensus 240 lnIGHa 245 (278)
T 3gk0_A 240 LNIGHA 245 (278)
T ss_dssp EEECHH
T ss_pred EecCHH
Confidence 677533
No 120
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=81.55 E-value=11 Score=32.87 Aligned_cols=77 Identities=5% Similarity=-0.010 Sum_probs=54.5
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.| .. .-+.+++.+.++.+.+...| ...+|+|. +.+.++..+..+.+.++
T Consensus 46 ~~li~~li~~Gv~Gl~v~GtTGE-~~-----~Ls~~Er~~v~~~~v~~~~g---rvpViaGvg~~st~~ai~la~~A~~~ 116 (315)
T 3si9_A 46 CNFVEWQITQGINGVSPVGTTGE-SP-----TLTHEEHKRIIELCVEQVAK---RVPVVAGAGSNSTSEAVELAKHAEKA 116 (315)
T ss_dssp HHHHHHHHHTTCSEEECSSTTTT-GG-----GSCHHHHHHHHHHHHHHHTT---SSCBEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEeCccccC-cc-----ccCHHHHHHHHHHHHHHhCC---CCcEEEeCCCCCHHHHHHHHHHHHhc
Confidence 56677777889998765322212 11 23788888888888776333 24578888 57888888999999999
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+-+
T Consensus 117 Gadavlv 123 (315)
T 3si9_A 117 GADAVLV 123 (315)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9987654
No 121
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=81.34 E-value=8.6 Score=33.01 Aligned_cols=77 Identities=6% Similarity=0.026 Sum_probs=50.3
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.|- . .-+.+++.+.++.+.+...| ...+|+|. +.+.++..+..+.+.+.
T Consensus 25 ~~lv~~li~~Gv~gl~~~GttGE~-~-----~Ls~~Er~~v~~~~~~~~~g---r~pviaGvg~~~t~~ai~la~~a~~~ 95 (292)
T 2ojp_A 25 KKLIDYHVASGTSAIVSVGTTGES-A-----TLNHDEHADVVMMTLDLADG---RIPVIAGTGANATAEAISLTQRFNDS 95 (292)
T ss_dssp HHHHHHHHHHTCCEEEESSTTTTG-G-----GSCHHHHHHHHHHHHHHHTT---SSCEEEECCCSSHHHHHHHHHHTTTS
T ss_pred HHHHHHHHHcCCCEEEECccccch-h-----hCCHHHHHHHHHHHHHHhCC---CCcEEEecCCccHHHHHHHHHHHHhc
Confidence 556666777888887653212111 1 23677888888887765333 23467888 55777888888888888
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+-+
T Consensus 96 Gadavlv 102 (292)
T 2ojp_A 96 GIVGCLT 102 (292)
T ss_dssp SCSEEEE
T ss_pred CCCEEEE
Confidence 8886544
No 122
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=81.27 E-value=9.3 Score=33.23 Aligned_cols=77 Identities=4% Similarity=-0.112 Sum_probs=55.3
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.| .. .-+.+++.+.++.+.+...| ..-+|+|. ..+.++..+..+.++++
T Consensus 48 ~~lv~~li~~Gv~Gi~v~GtTGE-~~-----~Ls~~Er~~v~~~~v~~~~g---rvpViaGvg~~~t~~ai~la~~A~~~ 118 (315)
T 3na8_A 48 GRSIERLIDGGVHAIAPLGSTGE-GA-----YLSDPEWDEVVDFTLKTVAH---RVPTIVSVSDLTTAKTVRRAQFAESL 118 (315)
T ss_dssp HHHHHHHHHTTCSEEECSSGGGT-GG-----GSCHHHHHHHHHHHHHHHTT---SSCBEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEECccccC-hh-----hCCHHHHHHHHHHHHHHhCC---CCcEEEecCCCCHHHHHHHHHHHHhc
Confidence 56777777889998775422222 11 23788888999888876333 24578888 57888889999999999
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+-+
T Consensus 119 Gadavlv 125 (315)
T 3na8_A 119 GAEAVMV 125 (315)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9997655
No 123
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=81.25 E-value=10 Score=32.96 Aligned_cols=76 Identities=8% Similarity=-0.025 Sum_probs=51.2
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.| .. .-+.+++.+.++.+.+.. | ...+|+|. ..+.++..+..+.++++
T Consensus 32 ~~lv~~li~~Gv~Gl~v~GtTGE-~~-----~Lt~~Er~~v~~~~v~~~-g---rvpViaGvg~~~t~~ai~la~~A~~~ 101 (313)
T 3dz1_A 32 DRLTDFYAEVGCEGVTVLGILGE-AP-----KLDAAEAEAVATRFIKRA-K---SMQVIVGVSAPGFAAMRRLARLSMDA 101 (313)
T ss_dssp HHHHHHHHHTTCSEEEESTGGGT-GG-----GSCHHHHHHHHHHHHHHC-T---TSEEEEECCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEeCccCcC-hh-----hCCHHHHHHHHHHHHHHc-C---CCcEEEecCCCCHHHHHHHHHHHHHc
Confidence 55666777788888765322222 11 236788888888887773 2 34567888 56778888888888888
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+-+
T Consensus 102 Gadavlv 108 (313)
T 3dz1_A 102 GAAGVMI 108 (313)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8887654
No 124
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=81.04 E-value=8.1 Score=36.34 Aligned_cols=79 Identities=18% Similarity=0.190 Sum_probs=55.3
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCC-CcEEEEEc-C--CCcCcHHHHHHHHHHc
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLST-KIKIEILI-P--DFRNQINHVLKIFKQA 163 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~-~~~i~~~~-~--~~~~~~~e~l~~l~~a 163 (293)
.+++.+++.++.+.+.|+..|.|.--.. + .....+.++++.+++..| ++.|.+.+ + |+.. .-.+..+ ++
T Consensus 172 ~~~e~~~~~a~~l~~~Gad~I~L~DT~G--~--~~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlAv--AN~laAv-eA 244 (539)
T 1rqb_A 172 HTVEGYVKLAGQLLDMGADSIALKDMAA--L--LKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTE--VSLMKAI-EA 244 (539)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEETTC--C--CCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHH--HHHHHHH-HT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCC--C--cCHHHHHHHHHHHHHhcCCCceEEEEeCCCCChHH--HHHHHHH-Hh
Confidence 4789999999999999999888842221 1 124688899999988776 55666654 2 3322 4456666 58
Q ss_pred CCCeeeeccc
Q psy2895 164 LPDVLNHNIE 173 (293)
Q Consensus 164 G~~~i~~~le 173 (293)
|++.+...+.
T Consensus 245 Ga~~VD~ti~ 254 (539)
T 1rqb_A 245 GVDVVDTAIS 254 (539)
T ss_dssp TCSEEEEBCG
T ss_pred CCCEEEEecc
Confidence 9999876553
No 125
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=80.89 E-value=7.7 Score=33.46 Aligned_cols=80 Identities=11% Similarity=0.121 Sum_probs=54.4
Q ss_pred HHHHHHHHHcCCC---eeeeccccchHHHhhcC-CCCCHHHHHHHHHHHHHhCCCceeeEeEEeec--CCCHHHHHHHHH
Q psy2895 154 NHVLKIFKQALPD---VLNHNIETVPRLYKKVR-PGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL--GENDEEILTVIH 227 (293)
Q Consensus 154 ~e~l~~l~~aG~~---~i~~~less~~~~~~i~-~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~--gEt~ed~~~~l~ 227 (293)
.+.++.+.++|+| .+.+++-+ +.. +.-. -+.+++...+.++.+++.. ++++ ++.+ +-+.+++.+.++
T Consensus 109 ~~~a~~~~~~g~d~~~~iein~~~-P~~-~g~~~~g~~~~~~~~ii~~vr~~~-~~Pv----~vK~~~~~~~~~~~~~a~ 181 (314)
T 2e6f_A 109 VAMVRRLAPVAQEKGVLLELNLSC-PNV-PGKPQVAYDFEAMRTYLQQVSLAY-GLPF----GVKMPPYFDIAHFDTAAA 181 (314)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECCC-CCS-TTCCCGGGSHHHHHHHHHHHHHHH-CSCE----EEEECCCCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcCceEEEEcCC-CCC-CCchhhcCCHHHHHHHHHHHHHhc-CCCE----EEEECCCCCHHHHHHHHH
Confidence 5677778888999 88887633 222 1111 0337788888898888763 3433 3333 457888888899
Q ss_pred HHHhCC-CCEEEee
Q psy2895 228 DMRNHN-IDILTIG 240 (293)
Q Consensus 228 ~l~~l~-~~~i~i~ 240 (293)
.+.+.| ++.+.+.
T Consensus 182 ~~~~aG~~d~i~v~ 195 (314)
T 2e6f_A 182 VLNEFPLVKFVTCV 195 (314)
T ss_dssp HHHTCTTEEEEEEC
T ss_pred HHHhcCCceEEEEe
Confidence 999999 9988764
No 126
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=80.74 E-value=12 Score=32.11 Aligned_cols=77 Identities=10% Similarity=0.096 Sum_probs=50.0
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.| .. .-+.+++.+.++.+.+...| ..-+|+|. ..+.++..+..+.++++
T Consensus 26 ~~lv~~li~~Gv~gl~v~GttGE-~~-----~Lt~~Er~~v~~~~~~~~~g---rvpviaGvg~~~t~~ai~la~~a~~~ 96 (292)
T 3daq_A 26 KAHVNFLLENNAQAIIVNGTTAE-SP-----TLTTDEKELILKTVIDLVDK---RVPVIAGTGTNDTEKSIQASIQAKAL 96 (292)
T ss_dssp HHHHHHHHHTTCCEEEESSGGGT-GG-----GSCHHHHHHHHHHHHHHHTT---SSCEEEECCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECccccc-cc-----cCCHHHHHHHHHHHHHHhCC---CCcEEEeCCcccHHHHHHHHHHHHHc
Confidence 55666777788888765322222 11 22677788888777765322 23467788 56777788888888888
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+-+
T Consensus 97 Gadavlv 103 (292)
T 3daq_A 97 GADAIML 103 (292)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8886654
No 127
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=80.63 E-value=8.4 Score=33.19 Aligned_cols=77 Identities=8% Similarity=-0.042 Sum_probs=48.0
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.| .. .-+.+++.+.++.+.+...| ...+|+|. +.+.++..+..+.+.+.
T Consensus 24 ~~lv~~li~~Gv~gi~v~GttGE-~~-----~Ls~~Er~~v~~~~~~~~~g---rvpviaGvg~~~t~~ai~la~~A~~~ 94 (297)
T 2rfg_A 24 AGLVDWQIKHGAHGLVPVGTTGE-SP-----TLTEEEHKRVVALVAEQAQG---RVPVIAGAGSNNPVEAVRYAQHAQQA 94 (297)
T ss_dssp HHHHHHHHHTTCSEEECSSGGGT-GG-----GSCHHHHHHHHHHHHHHHTT---SSCBEEECCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECccccc-hh-----hCCHHHHHHHHHHHHHHhCC---CCeEEEccCCCCHHHHHHHHHHHHhc
Confidence 45666667778887654321111 11 22677777777777765333 23467777 55777777778888888
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+-+
T Consensus 95 Gadavlv 101 (297)
T 2rfg_A 95 GADAVLC 101 (297)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8876544
No 128
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=80.56 E-value=17 Score=31.31 Aligned_cols=78 Identities=10% Similarity=0.006 Sum_probs=54.8
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.|-. .-+.+++.+.++.+.+...|- ..-+|+|. +.+.++..+..+.+.+.
T Consensus 31 ~~lv~~li~~Gv~gl~v~GttGE~~------~Ls~~Er~~v~~~~~~~~~g~--rvpviaGvg~~~t~~ai~la~~a~~~ 102 (301)
T 3m5v_A 31 ARLIKRQIENGIDAVVPVGTTGESA------TLTHEEHRTCIEIAVETCKGT--KVKVLAGAGSNATHEAVGLAKFAKEH 102 (301)
T ss_dssp HHHHHHHHHTTCCEEECSSTTTTGG------GSCHHHHHHHHHHHHHHHTTS--SCEEEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEECccccChh------hCCHHHHHHHHHHHHHHhCCC--CCeEEEeCCCCCHHHHHHHHHHHHHc
Confidence 5677777788999876532222211 237888888888888764441 23568888 56888888999999999
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+-+
T Consensus 103 Gadavlv 109 (301)
T 3m5v_A 103 GADGILS 109 (301)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9987655
No 129
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=80.42 E-value=5.5 Score=37.07 Aligned_cols=60 Identities=13% Similarity=0.101 Sum_probs=41.9
Q ss_pred HHHHHHHHHcCCCeeee-cc-cc-c------hHHHhhcCCCC-CHHHHHHHHHHHHHhCCCceeeEeEEeec
Q psy2895 154 NHVLKIFKQALPDVLNH-NI-ET-V------PRLYKKVRPGS-DYKHSLNLLKNFKKLYPNILTKSGIMVGL 215 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~-~l-es-s------~~~~~~i~~~~-~~e~~l~~i~~~~~~~pgi~~~~~~ivG~ 215 (293)
.+.|+.|++.|++.|.+ ++ ++ + ..-|..+.+.. +.+++.+.++.+|+. ||.|-.++++.+
T Consensus 35 ~~kLdYLk~LGvt~I~L~Pi~~~~~~~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~~--Gi~VilD~V~NH 104 (549)
T 4aie_A 35 ISRLDYLEKLGIDAIWLSPVYQSPGVDNGYDISDYEAIDPQYGTMADMDELISKAKEH--HIKIVMDLVVNH 104 (549)
T ss_dssp HTTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHT--TCEEEEEECCSB
T ss_pred HHhhHHHHHCCCCEEEeCCCcCCCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHHC--CCEEEEEECccC
Confidence 34566677777777665 22 22 1 11233455543 899999999999999 999999999977
No 130
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=80.28 E-value=11 Score=32.20 Aligned_cols=77 Identities=8% Similarity=0.106 Sum_probs=45.2
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.+ .. .-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.++++
T Consensus 25 ~~lv~~li~~Gv~gl~~~GttGE-~~-----~Ls~~Er~~v~~~~~~~~~g---r~pviaGvg~~~t~~ai~la~~a~~~ 95 (291)
T 3tak_A 25 EKLVEWHIEQGTNSIVAVGTTGE-AS-----TLSMEEHTQVIKEIIRVANK---RIPIIAGTGANSTREAIELTKAAKDL 95 (291)
T ss_dssp HHHHHHHHHHTCCEEEESSTTTT-GG-----GSCHHHHHHHHHHHHHHHTT---SSCEEEECCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECccccc-cc-----cCCHHHHHHHHHHHHHHhCC---CCeEEEeCCCCCHHHHHHHHHHHHhc
Confidence 45556666677777654321111 11 22667777777777665322 13456777 45677777777777777
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+-+
T Consensus 96 Gadavlv 102 (291)
T 3tak_A 96 GADAALL 102 (291)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 7776544
No 131
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=80.23 E-value=25 Score=31.32 Aligned_cols=185 Identities=10% Similarity=-0.022 Sum_probs=95.7
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEE-EcCCCcCc---HHHHHHHHHHcC
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEI-LIPDFRNQ---INHVLKIFKQAL 164 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~-~~~~~~~~---~~e~l~~l~~aG 164 (293)
+.++..+.++.+.+.|++.|+-+-..+.+-...-.+.+.++++..++. ++.+-+ .+|..+.. ..+.++.|++.|
T Consensus 15 ~~~~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~--g~~vi~DIsp~~l~~Lg~s~~dl~~~~~lG 92 (372)
T 2p0o_A 15 ITNDTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIAKAE--KMKIMVDISGEALKRAGFSFDELEPLIELG 92 (372)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHHHHH--TCEEEEEECHHHHHTTTCBTTBCHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHC--CCEEEEECCHHHHHHcCCCHHHHHHHHHcC
Confidence 456777888999999999886433322111111246788888888887 344444 23421110 034577888889
Q ss_pred CCeeee--ccccc--hHHHhhcC----CCCCHHHHHHHHHHHHHhCCCc---eeeEeEEee--cCCCHHHHHHHHHHHHh
Q psy2895 165 PDVLNH--NIETV--PRLYKKVR----PGSDYKHSLNLLKNFKKLYPNI---LTKSGIMVG--LGENDEEILTVIHDMRN 231 (293)
Q Consensus 165 ~~~i~~--~less--~~~~~~i~----~~~~~e~~l~~i~~~~~~~pgi---~~~~~~ivG--~gEt~ed~~~~l~~l~~ 231 (293)
++.+-+ ++... -.+-+.|. -+.-.++.++. +.+.-|.. ..+-++-.= -|=+.+.+.+.-+++++
T Consensus 93 i~glRLD~Gf~~~eia~ls~nlkIeLNASti~~~~l~~---l~~~~~n~~~l~a~HNFYPr~~TGLs~~~f~~~n~~~k~ 169 (372)
T 2p0o_A 93 VTGLRMDYGITIEQMAHASHKIDIGLNASTITLEEVAE---LKAHQADFSRLEAWHNYYPRPETGIGTTFFNEKNRWLKE 169 (372)
T ss_dssp CCEEEECSSCCHHHHHHHHTTSEEEEETTTCCHHHHHH---HHHTTCCGGGEEEECCCCCSTTCSBCHHHHHHHHHHHHH
T ss_pred CCEEEEcCCCCHHHHHHHhcCCEEEEECccCCHHHHHH---HHHcCCChHHeEEeeccCCCCCCCCCHHHHHHHHHHHHH
Confidence 998876 44321 12222222 12102334443 34441222 222222221 16788999999999999
Q ss_pred CCCCEEEeecC----CCCCC---CccccccccChhHHHHHHHHHHHhcccchhccc
Q psy2895 232 HNIDILTIGQY----LMPSR---LHLPVHRYLHPKFFEKFKKIAYKLGFKNVLVGS 280 (293)
Q Consensus 232 l~~~~i~i~~~----~~p~~---~~~a~~r~~~p~~~~~~~~~~~~~G~~~~~~~~ 280 (293)
.|+...-+-+- ..|.- -++-..|.+.|.. .+......-|+..+.+|+
T Consensus 170 ~Gi~t~AFI~g~~~~rGPl~eGLPTLE~HR~~~~~~--~a~~L~~~~~iD~V~IGd 223 (372)
T 2p0o_A 170 LGLQVFTFVPGDGQTRGPIFAGLPTLEKHRGQNPFA--AAVGLMADPYVDAVYIGD 223 (372)
T ss_dssp TTCEEEEEECCSSSCCTTTCSCCCSBGGGTTSCHHH--HHHHHHHSTTCCEEEECS
T ss_pred CCCcEEEEecCCCccCCCccCCCCchHHhCCCCHHH--HHHHHHhcCCCCEEEECC
Confidence 99875433111 01211 2444456555542 222232333566666665
No 132
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=80.05 E-value=12 Score=32.42 Aligned_cols=77 Identities=9% Similarity=0.046 Sum_probs=46.8
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.| .. .-+.+++.+.++.+.+...| ..-+|+|. ..+.++..+..+.+++.
T Consensus 38 ~~lv~~li~~Gv~Gl~v~GtTGE-~~-----~Ls~~Er~~v~~~~~~~~~g---r~pviaGvg~~~t~~ai~la~~A~~~ 108 (307)
T 3s5o_A 38 EENLHKLGTFPFRGFVVQGSNGE-FP-----FLTSSERLEVVSRVRQAMPK---NRLLLAGSGCESTQATVEMTVSMAQV 108 (307)
T ss_dssp HHHHHHHTTSCCSEEEESSGGGT-GG-----GSCHHHHHHHHHHHHHTSCT---TSEEEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEECccccc-hh-----hCCHHHHHHHHHHHHHHcCC---CCcEEEecCCCCHHHHHHHHHHHHHc
Confidence 44555666677777655322211 11 22677777777777775332 23456777 46777777777777788
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+-+
T Consensus 109 Gadavlv 115 (307)
T 3s5o_A 109 GADAAMV 115 (307)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8776544
No 133
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=79.62 E-value=9.5 Score=33.45 Aligned_cols=77 Identities=12% Similarity=0.116 Sum_probs=53.5
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.+ .. .-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.++
T Consensus 58 ~~lv~~li~~Gv~Gl~v~GtTGE-~~-----~Ls~eEr~~vi~~~ve~~~g---rvpViaGvg~~st~eai~la~~A~~~ 128 (332)
T 2r8w_A 58 SALIARLDAAEVDSVGILGSTGI-YM-----YLTREERRRAIEAAATILRG---RRTLMAGIGALRTDEAVALAKDAEAA 128 (332)
T ss_dssp HHHHHHHHHHTCSEEEESSTTTT-GG-----GSCHHHHHHHHHHHHHHHTT---SSEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECccccC-hh-----hCCHHHHHHHHHHHHHHhCC---CCcEEEecCCCCHHHHHHHHHHHHhc
Confidence 56677777789998765322212 11 23788888888888876433 23578888 56888888888999999
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+-+
T Consensus 129 Gadavlv 135 (332)
T 2r8w_A 129 GADALLL 135 (332)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9987654
No 134
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=79.57 E-value=12 Score=32.37 Aligned_cols=77 Identities=6% Similarity=-0.026 Sum_probs=42.2
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.| .. .-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.+.
T Consensus 32 ~~lv~~li~~Gv~gl~v~GtTGE-~~-----~Ls~~Er~~v~~~~~~~~~g---rvpviaGvg~~~t~~ai~la~~A~~~ 102 (309)
T 3fkr_A 32 KRAVDFMIDAGSDGLCILANFSE-QF-----AITDDERDVLTRTILEHVAG---RVPVIVTTSHYSTQVCAARSLRAQQL 102 (309)
T ss_dssp HHHHHHHHHTTCSCEEESSGGGT-GG-----GSCHHHHHHHHHHHHHHHTT---SSCEEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEECccccC-cc-----cCCHHHHHHHHHHHHHHhCC---CCcEEEecCCchHHHHHHHHHHHHHc
Confidence 44555566667776654321111 11 22566666666666654222 13456666 45666666777777777
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+-+
T Consensus 103 Gadavlv 109 (309)
T 3fkr_A 103 GAAMVMA 109 (309)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 7765533
No 135
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=79.34 E-value=27 Score=29.28 Aligned_cols=22 Identities=27% Similarity=0.613 Sum_probs=11.5
Q ss_pred CCCHHHHHHHHHHHHHhCCCce
Q psy2895 185 GSDYKHSLNLLKNFKKLYPNIL 206 (293)
Q Consensus 185 ~~~~e~~l~~i~~~~~~~pgi~ 206 (293)
+.+.++.++.++.+++..|+++
T Consensus 75 G~~~~~~~~~v~~ir~~~~~~P 96 (262)
T 2ekc_A 75 GIRFEDVLELSETLRKEFPDIP 96 (262)
T ss_dssp TCCHHHHHHHHHHHHHHCTTSC
T ss_pred CCCHHHHHHHHHHHHhhcCCCC
Confidence 4455555555655555543443
No 136
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=79.28 E-value=11 Score=32.83 Aligned_cols=77 Identities=13% Similarity=0.204 Sum_probs=53.2
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHN 233 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~ 233 (293)
...++.+.+.|++.+.+.--+.| .. .-+.+++.+.++.+.+...| ...+|+|.|.+.++..+..+.+++.|
T Consensus 36 ~~lv~~li~~Gv~gl~v~GtTGE-~~-----~Ls~eEr~~vi~~~~~~~~g---rvpViaGvg~st~~ai~la~~A~~~G 106 (314)
T 3d0c_A 36 DDNVEFLLQNGIEVIVPNGNTGE-FY-----ALTIEEAKQVATRVTELVNG---RATVVAGIGYSVDTAIELGKSAIDSG 106 (314)
T ss_dssp HHHHHHHHHTTCSEECTTSGGGT-GG-----GSCHHHHHHHHHHHHHHHTT---SSEEEEEECSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEECcccCC-hh-----hCCHHHHHHHHHHHHHHhCC---CCeEEecCCcCHHHHHHHHHHHHHcC
Confidence 56777777889988765321112 11 23788888888888776333 23578888338888888899999999
Q ss_pred CCEEEe
Q psy2895 234 IDILTI 239 (293)
Q Consensus 234 ~~~i~i 239 (293)
++-+-+
T Consensus 107 adavlv 112 (314)
T 3d0c_A 107 ADCVMI 112 (314)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 987655
No 137
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=79.26 E-value=19 Score=28.58 Aligned_cols=129 Identities=7% Similarity=0.018 Sum_probs=72.3
Q ss_pred HHHHHHHCCCcEEEEeeecCCCCCCCChhHH----HHHHHHHHhhCCCcEEEEEc-C-CCcCcHHHHHHHHHHcCCCeee
Q psy2895 96 IAYTINKLKLNYVVITSVNRDDLHDGGSSHF----VSCIKHIRKLSTKIKIEILI-P-DFRNQINHVLKIFKQALPDVLN 169 (293)
Q Consensus 96 ~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~----~~ll~~i~~~~~~~~i~~~~-~-~~~~~~~e~l~~l~~aG~~~i~ 169 (293)
.++++.+.| .+|-.-+-.++.+...+.+.+ ....+.|.+.. +...+.+. | +..+ ...++.+++.|...+.
T Consensus 48 ~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~-G~~~~~fr~P~G~~~--~~~~~~~~~~G~~~v~ 123 (195)
T 2cc0_A 48 LVRAQVDAG-MWVANHSYTHPHMTQLGQAQMDSEISRTQQAIAGAG-GGTPKLFRPPYGETN--ATLRSVEAKYGLTEVI 123 (195)
T ss_dssp HHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHTT-SCCCSEECCGGGCCC--HHHHHHHHHTTCEECC
T ss_pred HHHHHHHCC-CEEEcCCCCccccccCCHHHHHHHHHHHHHHHHHHh-CCCCCEEECCCCCcC--HHHHHHHHHCCCeEEE
Confidence 445566778 455444444443432223332 22333444432 23444554 5 5444 6788889999987766
Q ss_pred eccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec---CCCHHHHHHHHHHHHhCCCCEEEeecC
Q psy2895 170 HNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL---GENDEEILTVIHDMRNHNIDILTIGQY 242 (293)
Q Consensus 170 ~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~---gEt~ed~~~~l~~l~~l~~~~i~i~~~ 242 (293)
-++++.+-. ..+.+++.+.+ .+..||- +|+-+ ..|.+.+...+..+++-|..++++.+.
T Consensus 124 w~~d~~Dw~------~~~~~~i~~~~---~~~~~g~-----IiL~Hd~~~~t~~al~~ii~~l~~~Gy~~v~l~~~ 185 (195)
T 2cc0_A 124 WDVDSQDWN------NASTDAIVQAV---SRLGNGQ-----VILMHDWPANTLAAIPRIAQTLAGKGLCSGMISPQ 185 (195)
T ss_dssp CSEECCGGG------TCCHHHHHHHH---HTCCTTC-----EEEEESSCHHHHHHHHHHHHHHHHTTEEECEECTT
T ss_pred eccCCCccC------CCCHHHHHHHH---hCcCcCe-----EEEECCCchhHHHHHHHHHHHHHHCCCEEEEeCcc
Confidence 566552211 12566665554 3333442 33333 247788888999999999988888633
No 138
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=79.18 E-value=6.8 Score=32.74 Aligned_cols=139 Identities=12% Similarity=0.054 Sum_probs=79.5
Q ss_pred CcCcccCCCCCCCCChhHHHHHHHHHHHCCCcEEEEe--eecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcC
Q psy2895 75 CKFCNISHGRPDPLDIEEPKKIAYTINKLKLNYVVIT--SVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRN 151 (293)
Q Consensus 75 C~fC~~~~~~~~~~~~eei~~~~~~~~~~G~~~i~l~--gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~ 151 (293)
|+-..||.|. .+.+.-..+++++.+.|+.+|-+. -|. +...+.+++.+-++.+++..++..+++... ++++
T Consensus 82 ~tVigFP~G~---~~~~~Kv~Ea~~Ai~~GAdEIDmViNig~---lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt 155 (239)
T 3ngj_A 82 CTVIGFPLGA---TPSEVKAYETKVAVEQGAEEVDMVINIGM---VKAKKYDDVEKDVKAVVDASGKALTKVIIECCYLT 155 (239)
T ss_dssp EEEESTTTCC---SCHHHHHHHHHHHHHTTCSEEEEECCHHH---HHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGSC
T ss_pred EEEeccCCCC---CchHHHHHHHHHHHHcCCCEEEEEeehHH---hccccHHHHHHHHHHHHHHhcCCceEEEEecCCCC
Confidence 3344566553 356777888899999999987443 222 223345677777777777654556777654 5665
Q ss_pred cHHHHHHHH----HHcCCCeeeec--cccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHH
Q psy2895 152 QINHVLKIF----KQALPDVLNHN--IETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTV 225 (293)
Q Consensus 152 ~~~e~l~~l----~~aG~~~i~~~--less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~ 225 (293)
++.+... .++|.|.+.-+ .. ..+-+++++.- ++....- .+.+.+ -|=--|.+|..+.
T Consensus 156 --~eei~~a~~ia~~aGADfVKTSTGf~---------~ggAt~~dv~l-mr~~vg~--~v~VKa---sGGIrt~~da~~~ 218 (239)
T 3ngj_A 156 --NEEKVEVCKRCVAAGAEYVKTSTGFG---------THGATPEDVKL-MKDTVGD--KALVKA---AGGIRTFDDAMKM 218 (239)
T ss_dssp --HHHHHHHHHHHHHHTCSEEECCCSSS---------SCCCCHHHHHH-HHHHHGG--GSEEEE---ESSCCSHHHHHHH
T ss_pred --HHHHHHHHHHHHHHCcCEEECCCCCC---------CCCCCHHHHHH-HHHhhCC--CceEEE---eCCCCCHHHHHHH
Confidence 4555554 67899998754 11 12346655433 3332222 232221 2223466665555
Q ss_pred HHHHHhCCCCEEEee
Q psy2895 226 IHDMRNHNIDILTIG 240 (293)
Q Consensus 226 l~~l~~l~~~~i~i~ 240 (293)
+ ++|.+.+..+
T Consensus 219 i----~aGA~riGtS 229 (239)
T 3ngj_A 219 I----NNGASRIGAS 229 (239)
T ss_dssp H----HTTEEEEEES
T ss_pred H----Hhcccceecc
Confidence 4 6788877664
No 139
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=79.10 E-value=14 Score=33.21 Aligned_cols=108 Identities=8% Similarity=0.110 Sum_probs=72.3
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCCCC--C----------------------CCChhHHHHHHHHHHhhCCCcEEEE
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRDDL--H----------------------DGGSSHFVSCIKHIRKLSTKIKIEI 144 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~l--~----------------------~~~~~~~~~ll~~i~~~~~~~~i~~ 144 (293)
+.|...+.++.+.+.|+.-|-++.-.+..+ + ..+.+.+..|.+..++. ++.+
T Consensus 42 sle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~----Gi~~ 117 (385)
T 1vli_A 42 KLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREK----QVIF 117 (385)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHT----TCEE
T ss_pred cHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHc----CCcE
Confidence 688899999999999999887765543221 0 12345666666666654 4666
Q ss_pred EcCCCcCcHHHHHHHHHHcCCCeeeecc-cc-chHHHhhcC---------CCC-CHHHHHHHHHHHHHhCCCc
Q psy2895 145 LIPDFRNQINHVLKIFKQALPDVLNHNI-ET-VPRLYKKVR---------PGS-DYKHSLNLLKNFKKLYPNI 205 (293)
Q Consensus 145 ~~~~~~~~~~e~l~~l~~aG~~~i~~~l-es-s~~~~~~i~---------~~~-~~e~~l~~i~~~~~~~pgi 205 (293)
++. ..+ .+.++.|.+.|++.+.++- +. .-.+++.+. ++. +.++|..+++.+++. |-
T Consensus 118 ~st-pfD--~~svd~l~~~~vd~~KIgS~~~~N~pLL~~va~~gKPViLStGmaTl~Ei~~Ave~i~~~--Gn 185 (385)
T 1vli_A 118 LST-VCD--EGSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMIFSTAGAEISDVHEAWRTIRAE--GN 185 (385)
T ss_dssp ECB-CCS--HHHHHHHHTTCCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHTT--TC
T ss_pred EEc-cCC--HHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHC--CC
Confidence 542 133 6678888888899999853 33 345666553 222 688999999888877 54
No 140
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=78.89 E-value=27 Score=36.06 Aligned_cols=137 Identities=11% Similarity=0.079 Sum_probs=79.2
Q ss_pred CCChhHHHHHHHHHHHCC--CcEEEEeeecC-C----CCCCCChhHHHHHHHHHHhhCCCcEEEEEc---C--CCcC---
Q psy2895 87 PLDIEEPKKIAYTINKLK--LNYVVITSVNR-D----DLHDGGSSHFVSCIKHIRKLSTKIKIEILI---P--DFRN--- 151 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G--~~~i~l~gg~~-~----~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~---~--~~~~--- 151 (293)
.++.++.+++++.+.+.| +..|-+.||.. + .+...++ +.++.+++..|+..+..+. + ++..
T Consensus 569 ~~~~~dkl~ia~~L~~~gv~~~~iE~~gga~f~~~~~f~~~~p~----e~l~~~~~~~~~~~~~~l~R~~n~vg~~~~~~ 644 (1165)
T 2qf7_A 569 RMRTYDIARIAGTYSHALPNLLSLECWGGATFDVSMRFLTEDPW----ERLALIREGAPNLLLQMLLRGANGVGYTNYPD 644 (1165)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHHHCCCHH----HHHHHHHHHCTTSEEEEEEETTTBTCSSCCCH
T ss_pred cCCHHHHHHHHHHHHHhCCCceEEEeCCCCccHHHHhhcCCCHH----HHHHHHHHHchhhHHHHHhccccccccccCCc
Confidence 388999999999999985 55565544432 1 0111112 3445555555666665542 1 2211
Q ss_pred c-HHHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEee--c----C--CCHHHH
Q psy2895 152 Q-INHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVG--L----G--ENDEEI 222 (293)
Q Consensus 152 ~-~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG--~----g--Et~ed~ 222 (293)
+ ..+.++...++|++.+.+-. + + .+.+.....++.+++. |..+...+.++ + . -+.+.+
T Consensus 645 ~~~~~~i~~a~~~g~d~irif~-s-------l---~~~~~~~~~i~~~~~~--g~~v~~~i~~~~~~~d~~r~~~~~~~~ 711 (1165)
T 2qf7_A 645 NVVKYFVRQAAKGGIDLFRVFD-C-------L---NWVENMRVSMDAIAEE--NKLCEAAICYTGDILNSARPKYDLKYY 711 (1165)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEC-T-------T---CCGGGGHHHHHHHHHT--TCEEEEEEECCSCTTCTTSGGGCHHHH
T ss_pred hhHHHHHHHHHhcCcCEEEEEe-e-------H---HHHHHHHHHHHHHHhc--cceEEEEEEEeccccCCCCCCCCHHHH
Confidence 1 14678888889999987632 1 0 1234455666677777 76554444332 1 0 356667
Q ss_pred HHHHHHHHhCCCCEEEee
Q psy2895 223 LTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 223 ~~~l~~l~~l~~~~i~i~ 240 (293)
.+.++.+.+.|++.+.+.
T Consensus 712 ~~~~~~~~~~Ga~~i~l~ 729 (1165)
T 2qf7_A 712 TNLAVELEKAGAHIIAVK 729 (1165)
T ss_dssp HHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEe
Confidence 777777777777776663
No 141
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=78.53 E-value=17 Score=32.24 Aligned_cols=77 Identities=6% Similarity=-0.018 Sum_probs=53.8
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.++|++.+.+.--+.|-. .-+.+++.+.++.+.+...| ...+|+|. +.+.++..+..+.+.+.
T Consensus 83 ~~lv~~li~~Gv~Gl~v~GTTGE~~------~Ls~eEr~~vi~~~ve~~~g---rvpViaGvg~~st~eai~la~~A~~~ 153 (360)
T 4dpp_A 83 DDLVNIQIQNGAEGVIVGGTTGEGQ------LMSWDEHIMLIGHTVNCFGG---SIKVIGNTGSNSTREAIHATEQGFAV 153 (360)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTTGG------GSCHHHHHHHHHHHHHHHTT---TSEEEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEecccccChh------hCCHHHHHHHHHHHHHHhCC---CCeEEEecCCCCHHHHHHHHHHHHHc
Confidence 5667777788999877642222211 23788888888888776333 23468888 56888888999999999
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+-+
T Consensus 154 Gadavlv 160 (360)
T 4dpp_A 154 GMHAALH 160 (360)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9987654
No 142
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=78.49 E-value=19 Score=31.84 Aligned_cols=107 Identities=7% Similarity=-0.033 Sum_probs=72.4
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCCC--------CC---------------CCChhHHHHHHHHHHhhCCCcEEEEE
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRDD--------LH---------------DGGSSHFVSCIKHIRKLSTKIKIEIL 145 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~--------l~---------------~~~~~~~~~ll~~i~~~~~~~~i~~~ 145 (293)
+.|...+.++.+.+.|++-+-++.-.+.. +. ..+.+.+..|.+..++. ++.++
T Consensus 33 s~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~----Gi~~~ 108 (349)
T 2wqp_A 33 SLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESK----GMIFI 108 (349)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHT----TCEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHh----CCeEE
Confidence 68889999999999999988776332211 10 12346666666666664 45554
Q ss_pred c-CCCcCcHHHHHHHHHHcCCCeeeecc-cc-chHHHhhcC---------CCC-CHHHHHHHHHHHHHhCCCc
Q psy2895 146 I-PDFRNQINHVLKIFKQALPDVLNHNI-ET-VPRLYKKVR---------PGS-DYKHSLNLLKNFKKLYPNI 205 (293)
Q Consensus 146 ~-~~~~~~~~e~l~~l~~aG~~~i~~~l-es-s~~~~~~i~---------~~~-~~e~~l~~i~~~~~~~pgi 205 (293)
+ | .+ .+.++.|.+.|++.+.++- +. .-.+++.+. ++. +.++|..+++.+++. |-
T Consensus 109 st~--~d--~~svd~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkPviLstGmat~~Ei~~Ave~i~~~--G~ 175 (349)
T 2wqp_A 109 STL--FS--RAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMNSIESIKKSVEIIREA--GV 175 (349)
T ss_dssp EEE--CS--HHHHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHHH--TC
T ss_pred Eee--CC--HHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHc--CC
Confidence 4 4 33 5678888888999999853 33 346666653 222 789999999999988 65
No 143
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=78.48 E-value=32 Score=30.38 Aligned_cols=122 Identities=10% Similarity=0.120 Sum_probs=58.4
Q ss_pred HHHHHHHhhCCCcEEEEEcC-CCcCcHHHHHHHHHHcCCCeeeecccc-chHHHhhcCCCCCHHHHHHHHHHHHHhCCCc
Q psy2895 128 SCIKHIRKLSTKIKIEILIP-DFRNQINHVLKIFKQALPDVLNHNIET-VPRLYKKVRPGSDYKHSLNLLKNFKKLYPNI 205 (293)
Q Consensus 128 ~ll~~i~~~~~~~~i~~~~~-~~~~~~~e~l~~l~~aG~~~i~~~les-s~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi 205 (293)
.+|+++.+. +..|-+.+. ..+.++...++.+.+.|.+.+-+--.+ -+.-.+.+ =+.++..+++.+|++
T Consensus 126 pLL~~va~~--gKPviLstGmstl~Ei~~Ave~i~~~g~~viLlhC~s~YPt~~~~~--------nL~aI~~Lk~~fp~l 195 (350)
T 3g8r_A 126 PLLERIARS--DKPVVASTAGARREDIDKVVSFMLHRGKDLTIMHCVAEYPTPDDHL--------HLARIKTLRQQYAGV 195 (350)
T ss_dssp HHHHHHHTS--CSCEEEECTTCCHHHHHHHHHHHHTTTCCEEEEECCCCSSCCGGGC--------CTTHHHHHHHHCTTS
T ss_pred HHHHHHHhh--CCcEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCcccC--------CHHHHHHHHHHCCCC
Confidence 466777654 334555553 223223445566666675432221122 12111222 256788889988888
Q ss_pred eeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEeecCCCCCCCcccc-ccccChhHHHHHHH
Q psy2895 206 LTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYLMPSRLHLPV-HRYLHPKFFEKFKK 266 (293)
Q Consensus 206 ~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~~~~~p~~~~~a~-~r~~~p~~~~~~~~ 266 (293)
++. .-++ |...........-.+|...|-.+ +- |.....+. ..-+.|+++..+.+
T Consensus 196 pVG---~SdH--t~g~~~~~~~AAvAlGA~vIEkH-~t-ldr~~g~D~~~Sl~P~ef~~lv~ 250 (350)
T 3g8r_A 196 RIG---YSTH--EDPDLMEPIMLAVAQGATVFEKH-VG-LPTDQYGINNYSANPEQVRRWLA 250 (350)
T ss_dssp EEE---EEEC--CCSSCCHHHHHHHHTTCCEEEEE-BC-CCBTTBCCCTTCBCHHHHHHHHH
T ss_pred CEE---cCCC--CCCCccHHHHHHHHcCCCEEEEe-cC-cccCCCCcccccCCHHHHHHHHH
Confidence 652 1222 21100122234557999888776 43 32211111 12257888765543
No 144
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=78.37 E-value=22 Score=28.90 Aligned_cols=80 Identities=9% Similarity=0.180 Sum_probs=49.9
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCC-CcEEEEEcCCCcCcHHHHHHHHHHcCCC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLST-KIKIEILIPDFRNQINHVLKIFKQALPD 166 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~-~~~i~~~~~~~~~~~~e~l~~l~~aG~~ 166 (293)
.+++...+.++.+.+.|++.+.+.-.+.+..+.. ..-.++++.+++..+ .+.+.++.++ . .+.++.+.++|+|
T Consensus 20 ~d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~~--~~~~~~i~~l~~~~~~~~~v~l~vnd--~--~~~v~~~~~~Gad 93 (230)
T 1rpx_A 20 ANFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPNI--TIGPLVVDSLRPITDLPLDVHLMIVE--P--DQRVPDFIKAGAD 93 (230)
T ss_dssp SCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCB--CCCHHHHHHHGGGCCSCEEEEEESSS--H--HHHHHHHHHTTCS
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeeccCCccccc--ccCHHHHHHHHhccCCcEEEEEEecC--H--HHHHHHHHHcCCC
Confidence 3456778888888888999777753332211211 112477788877642 2345555432 1 4578888889999
Q ss_pred eeeeccc
Q psy2895 167 VLNHNIE 173 (293)
Q Consensus 167 ~i~~~le 173 (293)
.+++..+
T Consensus 94 ~v~vh~~ 100 (230)
T 1rpx_A 94 IVSVHCE 100 (230)
T ss_dssp EEEEECS
T ss_pred EEEEEec
Confidence 9987654
No 145
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=77.86 E-value=15 Score=33.89 Aligned_cols=78 Identities=10% Similarity=0.187 Sum_probs=54.6
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEc-C--CCcCcHHHHHHHHHHcC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILI-P--DFRNQINHVLKIFKQAL 164 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~-~--~~~~~~~e~l~~l~~aG 164 (293)
.+++.+++.++++.+.|+..|.|.--.. + .....+.++++.+++.. ++.|.+.+ + |+.. .-.+..+ ++|
T Consensus 155 ~~~e~~~~~a~~l~~~Gad~I~l~DT~G--~--~~P~~v~~lv~~l~~~~-~~~i~~H~Hnd~GlAv--AN~laAv-~AG 226 (464)
T 2nx9_A 155 HNLQTWVDVAQQLAELGVDSIALKDMAG--I--LTPYAAEELVSTLKKQV-DVELHLHCHSTAGLAD--MTLLKAI-EAG 226 (464)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEETTS--C--CCHHHHHHHHHHHHHHC-CSCEEEEECCTTSCHH--HHHHHHH-HTT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCCC--C--cCHHHHHHHHHHHHHhc-CCeEEEEECCCCChHH--HHHHHHH-HhC
Confidence 4789999999999999999988842221 1 12468889999998876 45566644 2 3322 4466666 589
Q ss_pred CCeeeeccc
Q psy2895 165 PDVLNHNIE 173 (293)
Q Consensus 165 ~~~i~~~le 173 (293)
++.+...+.
T Consensus 227 a~~VD~ti~ 235 (464)
T 2nx9_A 227 VDRVDTAIS 235 (464)
T ss_dssp CSEEEEBCG
T ss_pred CCEEEEecc
Confidence 999876553
No 146
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=77.85 E-value=17 Score=26.21 Aligned_cols=98 Identities=14% Similarity=0.273 Sum_probs=65.2
Q ss_pred hhHHHHHHHHHHhhCCCcEEEEEcCCCcCc-HHHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHh
Q psy2895 123 SSHFVSCIKHIRKLSTKIKIEILIPDFRNQ-INHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKL 201 (293)
Q Consensus 123 ~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~-~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~ 201 (293)
.+-+.+++++|++. ++++-+..++-..+ -.+.++.+...|+|.-. -.+.+++.+.++.+-+.
T Consensus 12 peilkeivreikrq--gvrvvllysdqdekrrrerleefekqgvdvrt---------------vedkedfrenireiwer 74 (162)
T 2l82_A 12 PEILKEIVREIKRQ--GVRVVLLYSDQDEKRRRERLEEFEKQGVDVRT---------------VEDKEDFRENIREIWER 74 (162)
T ss_dssp HHHHHHHHHHHHHT--TCEEEEEECCSCHHHHHHHHHHHHTTTCEEEE---------------CCSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC--CeEEEEEecCchHHHHHHHHHHHHHcCCceee---------------eccHHHHHHHHHHHHHh
Confidence 35688899999886 45665544322111 16778888777776432 22667788888888888
Q ss_pred CCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 202 YPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 202 ~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
+|.+.+ -+|+. .+..+-+.+.++..++-|++...++
T Consensus 75 ypqldv--vvivt-tddkewikdfieeakergvevfvvy 110 (162)
T 2l82_A 75 YPQLDV--VVIVT-TDDKEWIKDFIEEAKERGVEVFVVY 110 (162)
T ss_dssp CTTCCE--EEEEE-CCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCCcE--EEEEe-cCcHHHHHHHHHHHHhcCcEEEEEe
Confidence 888754 23332 6667777778888888999865553
No 147
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=77.85 E-value=26 Score=28.26 Aligned_cols=110 Identities=12% Similarity=0.031 Sum_probs=68.0
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCe
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDV 167 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~ 167 (293)
.+.++..+.++.+.+.|++-|-++--. ..-.+.++.+++ ++..+..-+ ++. .+.++...++|.+.
T Consensus 22 ~~~~~~~~~~~~l~~gGv~~iel~~k~---------~~~~~~i~~~~~--~~~~~gag~--vl~--~d~~~~A~~~GAd~ 86 (207)
T 2yw3_A 22 RGGEDLLGLARVLEEEGVGALEITLRT---------EKGLEALKALRK--SGLLLGAGT--VRS--PKEAEAALEAGAAF 86 (207)
T ss_dssp CSCCCHHHHHHHHHHTTCCEEEEECSS---------THHHHHHHHHTT--SSCEEEEES--CCS--HHHHHHHHHHTCSE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCC---------hHHHHHHHHHhC--CCCEEEeCe--Eee--HHHHHHHHHcCCCE
Confidence 467788899999999999987775211 133477777777 555544433 344 57788888899999
Q ss_pred eeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 168 LNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 168 i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
++.+ +.+. +.++.+++. |+. ++.| -.|.+|.... .+.|.|.+.++
T Consensus 87 v~~~-~~d~----------------~v~~~~~~~--g~~----~i~G-~~t~~e~~~A----~~~Gad~v~~f 131 (207)
T 2yw3_A 87 LVSP-GLLE----------------EVAALAQAR--GVP----YLPG-VLTPTEVERA----LALGLSALKFF 131 (207)
T ss_dssp EEES-SCCH----------------HHHHHHHHH--TCC----EEEE-ECSHHHHHHH----HHTTCCEEEET
T ss_pred EEcC-CCCH----------------HHHHHHHHh--CCC----EEec-CCCHHHHHHH----HHCCCCEEEEe
Confidence 8865 2211 344455555 543 3445 2355554332 34577777664
No 148
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=77.73 E-value=8.5 Score=31.90 Aligned_cols=73 Identities=12% Similarity=0.112 Sum_probs=37.5
Q ss_pred HHHHHHHHHhhCCCcEEEEE-cCCC-----cCcHHHHHHHHHHcCCCeeeecc----cc-chHHHhhcCCCCCHHHHHHH
Q psy2895 126 FVSCIKHIRKLSTKIKIEIL-IPDF-----RNQINHVLKIFKQALPDVLNHNI----ET-VPRLYKKVRPGSDYKHSLNL 194 (293)
Q Consensus 126 ~~~ll~~i~~~~~~~~i~~~-~~~~-----~~~~~e~l~~l~~aG~~~i~~~l----es-s~~~~~~i~~~~~~e~~l~~ 194 (293)
+.+.++.+++.+-+ .|++. .... .....+..+.++++|+....+.. .+ .+... ....+...+.
T Consensus 16 ~~~~l~~~~~~G~~-~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 89 (278)
T 1i60_A 16 LKLDLELCEKHGYD-YIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGH-----NEIITEFKGM 89 (278)
T ss_dssp HHHHHHHHHHTTCS-EEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHH-----HHHHHHHHHH
T ss_pred HHHHHHHHHHhCCC-EEEEccHHHHHHHhccCCHHHHHHHHHHcCCCeeeeccccccccCCHHHH-----HHHHHHHHHH
Confidence 55666777665322 56666 3211 12235566667777776433321 11 11211 1134556677
Q ss_pred HHHHHHhCCCce
Q psy2895 195 LKNFKKLYPNIL 206 (293)
Q Consensus 195 i~~~~~~~pgi~ 206 (293)
++.+++. |..
T Consensus 90 i~~a~~l--G~~ 99 (278)
T 1i60_A 90 METCKTL--GVK 99 (278)
T ss_dssp HHHHHHH--TCC
T ss_pred HHHHHHc--CCC
Confidence 7777777 774
No 149
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=77.66 E-value=21 Score=32.72 Aligned_cols=95 Identities=6% Similarity=-0.013 Sum_probs=52.9
Q ss_pred hhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhC
Q psy2895 123 SSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLY 202 (293)
Q Consensus 123 ~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~ 202 (293)
.+...+++..+.. + .+.+.-+|+.+ .+.+.++.++ ++.+-+| +.+ |+ ..+....++ .+...
T Consensus 195 l~~~~~L~~~ip~---~-~~vIaEsGI~t--~edv~~~~~~-a~avLVG----eal---mr-~~d~~~~~~---~l~~~- 255 (452)
T 1pii_A 195 LNRTRELAPKLGH---N-VTVISESGINT--YAQVRELSHF-ANGFLIG----SAL---MA-HDDLHAAVR---RVLLG- 255 (452)
T ss_dssp THHHHHHHHHHCT---T-SEEEEESCCCC--HHHHHHHTTT-CSEEEEC----HHH---HT-CSCHHHHHH---HHHHC-
T ss_pred HHHHHHHHHhCCC---C-CeEEEECCCCC--HHHHHHHHHh-CCEEEEc----HHH---cC-CcCHHHHHH---HHHHH-
Confidence 4455555554432 2 23344356666 8889999988 9998887 222 33 334444443 33322
Q ss_pred CCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEeecCCCCCCC
Q psy2895 203 PNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYLMPSRL 248 (293)
Q Consensus 203 pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~~~~~p~~~ 248 (293)
.+++ -|+ -+.+| +..+.++|++.+.+- |.+++||
T Consensus 256 -~~KI-----CGi-t~~ed----a~~a~~~Gad~iGfI-f~~~SpR 289 (452)
T 1pii_A 256 -ENKV-----CGL-TRGQD----AKAAYDAGAIYGGLI-FVATSPR 289 (452)
T ss_dssp -SCEE-----CCC-CSHHH----HHHHHHHTCSEEEEE-CCTTCTT
T ss_pred -hccc-----cCC-CcHHH----HHHHHhcCCCEEEee-cCCCCCC
Confidence 2332 333 23334 455567899999886 6665554
No 150
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=77.56 E-value=23 Score=30.62 Aligned_cols=78 Identities=9% Similarity=0.095 Sum_probs=53.1
Q ss_pred HHHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHh
Q psy2895 153 INHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRN 231 (293)
Q Consensus 153 ~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~ 231 (293)
+...++.+.+.|++.+.+.--+.| .. .-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.+
T Consensus 30 l~~lv~~li~~Gv~Gl~v~GtTGE-~~-----~Ls~~Er~~v~~~~~~~~~g---rvpViaGvg~~~t~~ai~la~~A~~ 100 (311)
T 3h5d_A 30 IPALIEHLLAHHTDGILLAGTTAE-SP-----TLTHDEELELFAAVQKVVNG---RVPLIAGVGTNDTRDSIEFVKEVAE 100 (311)
T ss_dssp HHHHHHHHHHTTCCCEEESSTTTT-GG-----GSCHHHHHHHHHHHHHHSCS---SSCEEEECCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECccccC-hh-----hCCHHHHHHHHHHHHHHhCC---CCcEEEeCCCcCHHHHHHHHHHHHh
Confidence 366777777888888765422221 11 23788888888888877433 24568888 5678888888888888
Q ss_pred CCC-CEEEe
Q psy2895 232 HNI-DILTI 239 (293)
Q Consensus 232 l~~-~~i~i 239 (293)
+|. +-+-+
T Consensus 101 ~Ga~davlv 109 (311)
T 3h5d_A 101 FGGFAAGLA 109 (311)
T ss_dssp SCCCSEEEE
T ss_pred cCCCcEEEE
Confidence 885 76544
No 151
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=77.37 E-value=31 Score=28.94 Aligned_cols=48 Identities=13% Similarity=0.245 Sum_probs=23.0
Q ss_pred HHHHHHHHHcCCCeeeeccccc------hHH----HhhcCCCCCHHHHHHHHHHHHHh
Q psy2895 154 NHVLKIFKQALPDVLNHNIETV------PRL----YKKVRPGSDYKHSLNLLKNFKKL 201 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less------~~~----~~~i~~~~~~e~~l~~i~~~~~~ 201 (293)
.+.++.|.++|+|.+.+++--+ +.+ .+.+..+.+.+..++.++.+++.
T Consensus 34 ~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~ 91 (268)
T 1qop_A 34 LKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREK 91 (268)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc
Confidence 4455556666666666554111 111 11122344555566666666655
No 152
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=77.19 E-value=5 Score=33.77 Aligned_cols=104 Identities=16% Similarity=0.203 Sum_probs=62.1
Q ss_pred ChhHHHHHHHHHHhhCCCcEEEEEc-CCCcCcHHHHHHHHHHcCCCeeeeccccchHHHh----hcCC------------
Q psy2895 122 GSSHFVSCIKHIRKLSTKIKIEILI-PDFRNQINHVLKIFKQALPDVLNHNIETVPRLYK----KVRP------------ 184 (293)
Q Consensus 122 ~~~~~~~ll~~i~~~~~~~~i~~~~-~~~~~~~~e~l~~l~~aG~~~i~~~less~~~~~----~i~~------------ 184 (293)
..+.+.++++.+++. ++.++++. |+ .+.++.-++.|.++|-+.-..--+.+. .+.+
T Consensus 109 ~~~~L~~~i~~L~~~--GIrVSLFIDpd-----~~qi~aA~~~GAd~IELhTG~YA~a~~~~~sn~~~~~~~~~~l~~~~ 181 (260)
T 3o6c_A 109 NHAKLKQSIEKLQNA--NIEVSLFINPS-----LEDIEKSKILKAQFIELHTGHYANLHNALFSNISHTAFALKELDQDK 181 (260)
T ss_dssp TCTTHHHHHHHHHHT--TCEEEEEECSC-----HHHHHHHHHTTCSEEEECCHHHHHHHHHHHSSGGGSTTCCGGGCSCH
T ss_pred CHHHHHHHHHHHHHC--CCEEEEEeCCC-----HHHHHHHHHhCCCEEEEechHhhhhhhcccccccccccccccccccc
Confidence 356788999999886 67888876 32 678899899999998764322111111 1110
Q ss_pred -------CCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhC-CCCEEEeecC
Q psy2895 185 -------GSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNH-NIDILTIGQY 242 (293)
Q Consensus 185 -------~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l-~~~~i~i~~~ 242 (293)
...++.+.++.+.+++. |+.+++ |+|=|.+.+... ..+ ++..++|...
T Consensus 182 ~~~~~~~~~el~~l~~aA~~A~~l--GL~VnA----GHGL~y~Nv~~i----a~ip~i~ElnIGHa 237 (260)
T 3o6c_A 182 KTLQAQFEKELQNLELCAKKGLEL--GLKVAA----GHGLNYKNVKPV----VKIKEICELNIGQS 237 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT--TCEEEE----CTTCCTTTTHHH----HTCTTCCEEEECHH
T ss_pred chhhHHHHHHHHHHHHHHHHHHHc--CCEEec----CCCCCHHHHHHH----HhCCCCeEEecCHH
Confidence 11234455556667777 886654 565555444322 233 4666777633
No 153
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=77.19 E-value=14 Score=33.21 Aligned_cols=121 Identities=12% Similarity=0.131 Sum_probs=66.1
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCCC----CCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcC
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRDD----LHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQAL 164 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~----l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG 164 (293)
+.+...+.++.+.+.|+..|.++.-.+.+ +...+.+.+..+.+..++. ++.+.+. ..+ .+.++.+.+.
T Consensus 154 s~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~----Gl~~~te-~~d--~~~~~~l~~~- 225 (385)
T 3nvt_A 154 SYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEY----GLGVISE-IVT--PADIEVALDY- 225 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH----TCEEEEE-CCS--GGGHHHHTTT-
T ss_pred CHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHc----CCEEEEe-cCC--HHHHHHHHhh-
Confidence 78899999999999999987766544321 1112345554444443333 4555441 233 4456777666
Q ss_pred CCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCC
Q psy2895 165 PDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNID 235 (293)
Q Consensus 165 ~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~ 235 (293)
++.+.++--. + . ++ ..++.+.+. |.++ .+=-|..-|.+|+...++.+.+-|-+
T Consensus 226 vd~lkIgs~~---~----~---n~----~LL~~~a~~--gkPV--ilk~G~~~t~~e~~~Ave~i~~~Gn~ 278 (385)
T 3nvt_A 226 VDVIQIGARN---M----Q---NF----ELLKAAGRV--DKPI--LLKRGLSATIEEFIGAAEYIMSQGNG 278 (385)
T ss_dssp CSEEEECGGG---T----T---CH----HHHHHHHTS--SSCE--EEECCTTCCHHHHHHHHHHHHTTTCC
T ss_pred CCEEEECccc---c----c---CH----HHHHHHHcc--CCcE--EEecCCCCCHHHHHHHHHHHHHcCCC
Confidence 8998886321 0 0 11 223333333 4432 11123334677777777777666543
No 154
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=76.91 E-value=21 Score=28.49 Aligned_cols=123 Identities=11% Similarity=0.057 Sum_probs=67.1
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEE--EcCCCcCcHHHHHHHHHHcCC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEI--LIPDFRNQINHVLKIFKQALP 165 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~--~~~~~~~~~~e~l~~l~~aG~ 165 (293)
.+.++-++.++.+. .|+.-+-++- + +. ...=.++++.+++.+++..+-+ ...+ .. ...++.+.++|+
T Consensus 10 ~~~~~~~~~~~~~~-~~~diie~G~--p--~~---~~~g~~~i~~ir~~~~~~~i~~~~~~~~-~~--~~~~~~~~~~Ga 78 (211)
T 3f4w_A 10 LTLPEAMVFMDKVV-DDVDIIEVGT--P--FL---IREGVNAIKAIKEKYPHKEVLADAKIMD-GG--HFESQLLFDAGA 78 (211)
T ss_dssp CCHHHHHHHHHHHG-GGCSEEEECH--H--HH---HHHTTHHHHHHHHHCTTSEEEEEEEECS-CH--HHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHhh-cCccEEEeCc--H--HH---HhccHHHHHHHHHhCCCCEEEEEEEecc-ch--HHHHHHHHhcCC
Confidence 45778888888774 4666544431 1 10 1112367788887755554422 2211 11 234888899999
Q ss_pred CeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 166 DVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 166 ~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
|.+.+..... .+...+.++.+++. |+.+...+ .+ .+|. .+.++.+.+.|++.+.++
T Consensus 79 d~v~v~~~~~------------~~~~~~~~~~~~~~--g~~~~v~~-~~-~~t~---~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 79 DYVTVLGVTD------------VLTIQSCIRAAKEA--GKQVVVDM-IC-VDDL---PARVRLLEEAGADMLAVH 134 (211)
T ss_dssp SEEEEETTSC------------HHHHHHHHHHHHHH--TCEEEEEC-TT-CSSH---HHHHHHHHHHTCCEEEEE
T ss_pred CEEEEeCCCC------------hhHHHHHHHHHHHc--CCeEEEEe-cC-CCCH---HHHHHHHHHcCCCEEEEc
Confidence 9998864431 23344566667777 76542211 11 2332 334455566777776654
No 155
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=76.81 E-value=9.5 Score=33.63 Aligned_cols=86 Identities=12% Similarity=0.193 Sum_probs=53.0
Q ss_pred HHHHHHHHcCCCeeeeccc-c--chHHHhhc-C-C----CCCHHH----HHHHHHHHHHhCC-CceeeEeEEe----ecC
Q psy2895 155 HVLKIFKQALPDVLNHNIE-T--VPRLYKKV-R-P----GSDYKH----SLNLLKNFKKLYP-NILTKSGIMV----GLG 216 (293)
Q Consensus 155 e~l~~l~~aG~~~i~~~le-s--s~~~~~~i-~-~----~~~~e~----~l~~i~~~~~~~p-gi~~~~~~iv----G~g 216 (293)
+..++.+++|+|.|.+..- + ....+.-. + | +.+.+. .+++++.++++.+ ++.+..-+=. .-|
T Consensus 156 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g 235 (349)
T 3hgj_A 156 EGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGG 235 (349)
T ss_dssp HHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTS
T ss_pred HHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCC
Confidence 4455667789999876432 2 13333221 1 1 235655 4677788888753 3333222211 015
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 217 ENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 217 Et~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
.+.++..+.++.+.+.|++.+.+.
T Consensus 236 ~~~~~~~~la~~L~~~Gvd~i~vs 259 (349)
T 3hgj_A 236 WSLEDTLAFARRLKELGVDLLDCS 259 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEe
Confidence 688999999999999999999886
No 156
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=76.61 E-value=4.9 Score=36.49 Aligned_cols=85 Identities=15% Similarity=0.122 Sum_probs=60.1
Q ss_pred HHHHHHHHHcCCCeeeec-c-cc-ch----HHHhhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCC------
Q psy2895 154 NHVLKIFKQALPDVLNHN-I-ET-VP----RLYKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GEN------ 218 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~-l-es-s~----~~~~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt------ 218 (293)
.+.|+.|++.|++.|.++ + ++ +. .-|..+.+. .+.+++.+.++.+|+. ||.+-.++++.+ ++.
T Consensus 39 ~~~Ldyl~~LGv~~i~l~Pi~~~~~~~y~~~dy~~idp~~Gt~~d~~~lv~~ah~~--Gi~vilD~V~NH~s~~~wF~~q 116 (424)
T 2dh2_A 39 KGRLDYLSSLKVKGLVLGPIHKNQKDDVAQTDLLQIDPNFGSKEDFDSLLQSAKKK--SIRVILDLTPNYRGENSWFSTQ 116 (424)
T ss_dssp HTTHHHHHHTTCSEEEECCCEEECTTCSTTEEEEEECGGGCCHHHHHHHHHHHHHT--TCEEEEECCTTTTSSSTTCSSC
T ss_pred HHHHHHHHHcCCCEEEECCCCCCCCCCCCcccccccCccCCCHHHHHHHHHHHHHC--CCEEEEEECCCcCCCccccccc
Confidence 456777888888887663 2 22 11 122345543 3899999999999999 999999999988 632
Q ss_pred ----HHHHHHHHHHHHhCCCCEEEee
Q psy2895 219 ----DEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 219 ----~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
.+.+.+.+.+-.+.|+|-+.+-
T Consensus 117 ~~~Vr~~~~~~~~~Wl~~gvDGfRlD 142 (424)
T 2dh2_A 117 VDTVATKVKDALEFWLQAGVDGFQVR 142 (424)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEEC
T ss_pred CHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 3556677776667899988773
No 157
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=76.59 E-value=16 Score=30.16 Aligned_cols=74 Identities=5% Similarity=-0.057 Sum_probs=38.9
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEee-c-CCC-------HHHHHH
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVG-L-GEN-------DEEILT 224 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG-~-gEt-------~ed~~~ 224 (293)
++.++.++++|++.+.+... ... ..+.-+..+.+.+. |+.+.+....+ + ... .+.+.+
T Consensus 21 ~~~l~~~~~~G~~~vEl~~~---~~~--------~~~~~~~~~~l~~~--gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~ 87 (275)
T 3qc0_A 21 AEAVDICLKHGITAIAPWRD---QVA--------AIGLGEAGRIVRAN--GLKLTGLCRGGFFPAPDASGREKAIDDNRR 87 (275)
T ss_dssp HHHHHHHHHTTCCEEECBHH---HHH--------HHCHHHHHHHHHHH--TCEESCEEEEECCCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeccc---ccc--------ccCHHHHHHHHHHc--CCceEEeecCCCcCCCCHHHHHHHHHHHHH
Confidence 66777777777777665431 110 11223334455566 77654322222 1 212 245666
Q ss_pred HHHHHHhCCCCEEEee
Q psy2895 225 VIHDMRNHNIDILTIG 240 (293)
Q Consensus 225 ~l~~l~~l~~~~i~i~ 240 (293)
.++...++|...+.+.
T Consensus 88 ~i~~a~~lG~~~v~~~ 103 (275)
T 3qc0_A 88 AVDEAAELGADCLVLV 103 (275)
T ss_dssp HHHHHHHTTCSCEEEE
T ss_pred HHHHHHHhCCCEEEEe
Confidence 6677777777776664
No 158
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=76.49 E-value=34 Score=31.26 Aligned_cols=124 Identities=14% Similarity=0.104 Sum_probs=75.7
Q ss_pred CCChhHHHHHHHHHHH-CCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCC-cCcHHHHHHHH-HHc
Q psy2895 87 PLDIEEPKKIAYTINK-LKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDF-RNQINHVLKIF-KQA 163 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~-~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~-~~~~~e~l~~l-~~a 163 (293)
.++++|.++..+++.+ +++ ..-+.| +...+++.+..+-+.+.. . +.++..++ .++ .+.++.. ..-
T Consensus 280 ~~t~~Elid~y~~lle~ypI-----v~IEDP-l~~dD~eg~a~Lt~~lg~---~--iqIvGDDl~vTn-~~~i~~~Ie~~ 347 (452)
T 3otr_A 280 HLTGEKLKEVYEGWLKKYPI-----ISVEDP-FDQDDFASFSAFTKDVGE---K--TQVIGDDILVTN-ILRIEKALKDK 347 (452)
T ss_dssp EECHHHHHHHHHHHHHHSCE-----EEEECC-SCTTCHHHHHHHHHHHTT---T--SEEEESTTTTTC-HHHHHHHHHHT
T ss_pred cccHHHHHHHHHHHHhhhCc-----eEEecC-CChhhHHHHHHHHHhhCC---C--eEEEeCccccCC-HHHHHHHHhcC
Confidence 4789999999888644 442 222322 444456667666655532 1 33333332 333 4444443 333
Q ss_pred CCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec--CCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 164 LPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL--GENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 164 G~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~--gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
-++.+.+.+ ++-.+.-+.+++++.++++ |+. .|+|+ |||++.+... +.-.++...|-..
T Consensus 348 a~n~IlIKv----------nQIGgITEalka~~lA~~~--G~~----vmvshrSGETeD~~iAd--LaVgl~~gqIKtG 408 (452)
T 3otr_A 348 ACNCLLLKV----------NQIGSVTEAIEACLLAQKS--GWG----VQVSHRSGETEDSFIAD--LVVGLRCGQIKSG 408 (452)
T ss_dssp CCSEEEECH----------HHHCCHHHHHHHHHHHHHT--TCE----EEEECCSSCCSCCHHHH--HHHHTTCCEEECC
T ss_pred CCCEEEeec----------cccccHHHHHHHHHHHHHc--CCe----EEEeCCCCCCchhHHHH--HHHHcCCCccccC
Confidence 466666542 2223788899999999999 874 47888 9999887644 4566777776664
No 159
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=76.36 E-value=18 Score=31.00 Aligned_cols=82 Identities=10% Similarity=0.054 Sum_probs=54.2
Q ss_pred HHHHHHHHHcCCC-eeeeccccchHHHhhcCC-CCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHh
Q psy2895 154 NHVLKIFKQALPD-VLNHNIETVPRLYKKVRP-GSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRN 231 (293)
Q Consensus 154 ~e~l~~l~~aG~~-~i~~~less~~~~~~i~~-~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~ 231 (293)
.+.++.+.++|+| .+.+++-+ +.. +.-.. +.+++...+.++.+++.. ++++..-+ ..+-+.+++.+.++.+.+
T Consensus 109 ~~~a~~~~~~g~d~~iein~~~-P~~-~g~~~~g~~~e~~~~iv~~vr~~~-~~Pv~vKi--~~~~~~~~~~~~a~~~~~ 183 (311)
T 1jub_A 109 IAMLKKIQESDFSGITELNLSC-PNV-PGEPQLAYDFEATEKLLKEVFTFF-TKPLGVKL--PPYFDLVHFDIMAEILNQ 183 (311)
T ss_dssp HHHHHHHHHSCCCSEEEEESCC-CCS-SSCCCGGGCHHHHHHHHHHHTTTC-CSCEEEEE--CCCCSHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCeEEEEeccC-CCC-CCcccccCCHHHHHHHHHHHHHhc-CCCEEEEE--CCCCCHHHHHHHHHHHHH
Confidence 5677788889999 88887643 222 11110 237788888888888763 34332221 123477888888999999
Q ss_pred CCCCEEEee
Q psy2895 232 HNIDILTIG 240 (293)
Q Consensus 232 l~~~~i~i~ 240 (293)
.|++.+.+.
T Consensus 184 ~G~d~i~v~ 192 (311)
T 1jub_A 184 FPLTYVNSV 192 (311)
T ss_dssp SCCCEEEEC
T ss_pred cCCcEEEec
Confidence 999988775
No 160
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=76.36 E-value=14 Score=32.50 Aligned_cols=85 Identities=11% Similarity=0.185 Sum_probs=53.2
Q ss_pred HHHHHHHHcCCCeeeeccc-c--chHHHhhc-C-C----CCCHHHH----HHHHHHHHHhCCCceeeEeEEee----cCC
Q psy2895 155 HVLKIFKQALPDVLNHNIE-T--VPRLYKKV-R-P----GSDYKHS----LNLLKNFKKLYPNILTKSGIMVG----LGE 217 (293)
Q Consensus 155 e~l~~l~~aG~~~i~~~le-s--s~~~~~~i-~-~----~~~~e~~----l~~i~~~~~~~pgi~~~~~~ivG----~gE 217 (293)
+..++.+++|.|.|.+..- + ....+.-. + | +.+++.+ +++++.++++. ++++..-+=.+ -|.
T Consensus 148 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~pv~vRls~~~~~~~g~ 226 (340)
T 3gr7_A 148 NGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGPLFVRISASDYHPDGL 226 (340)
T ss_dssp HHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEESCCCSTTSC
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCceEEEeccccccCCCC
Confidence 4455567789999876432 1 12332221 1 1 3466654 67788888875 44433322211 146
Q ss_pred CHHHHHHHHHHHHhCCCCEEEee
Q psy2895 218 NDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 218 t~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
+.++..+.++.+.+.|++.+.++
T Consensus 227 ~~~~~~~la~~L~~~Gvd~i~vs 249 (340)
T 3gr7_A 227 TAKDYVPYAKRMKEQGVDLVDVS 249 (340)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEe
Confidence 78899999999999999999986
No 161
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=76.34 E-value=8.4 Score=33.25 Aligned_cols=77 Identities=8% Similarity=-0.051 Sum_probs=41.6
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.| .. .-+.+++.+.++.+.+...| ...+|+|. +.+.++..+..+.++++
T Consensus 28 ~~lv~~li~~Gv~gl~v~GttGE-~~-----~Ls~~Er~~v~~~~~~~~~g---rvpviaGvg~~~t~~ai~la~~a~~~ 98 (300)
T 3eb2_A 28 GRLCDDLIQAGVHGLTPLGSTGE-FA-----YLGTAQREAVVRATIEAAQR---RVPVVAGVASTSVADAVAQAKLYEKL 98 (300)
T ss_dssp HHHHHHHHHTTCSCBBTTSGGGT-GG-----GCCHHHHHHHHHHHHHHHTT---SSCBEEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECccccC-cc-----ccCHHHHHHHHHHHHHHhCC---CCcEEEeCCCCCHHHHHHHHHHHHHc
Confidence 44555566667776654211111 11 22566666666666654222 12356666 45666666666777777
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+-+
T Consensus 99 Gadavlv 105 (300)
T 3eb2_A 99 GADGILA 105 (300)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 7765433
No 162
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=76.01 E-value=30 Score=28.13 Aligned_cols=128 Identities=9% Similarity=0.139 Sum_probs=73.2
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCC-CcEEEEEcCCCcCcHHHHHHHHHHcCCCe
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLST-KIKIEILIPDFRNQINHVLKIFKQALPDV 167 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~-~~~i~~~~~~~~~~~~e~l~~l~~aG~~~ 167 (293)
+...+.+.++.+.+.|++.+.+---+.+..+.. ..-.+.++.+++... ...+.+++++- .+.++.+.++|+|.
T Consensus 17 d~~~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~~--~~~~~~~~~lr~~~~~~~~v~lmv~d~----~~~i~~~~~agad~ 90 (228)
T 1h1y_A 17 DFANLAAEADRMVRLGADWLHMDIMDGHFVPNL--TIGAPVIQSLRKHTKAYLDCHLMVTNP----SDYVEPLAKAGASG 90 (228)
T ss_dssp CGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCB--CBCHHHHHHHHTTCCSEEEEEEESSCG----GGGHHHHHHHTCSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEEecCCcCcch--hhCHHHHHHHHhhcCCcEEEEEEecCH----HHHHHHHHHcCCCE
Confidence 466677788888888999876653332212211 112367777877642 23555666421 33577777899999
Q ss_pred eeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhC--CCCEEEeecC
Q psy2895 168 LNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNH--NIDILTIGQY 242 (293)
Q Consensus 168 i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l--~~~~i~i~~~ 242 (293)
+++..+..+. . +.+.++.+++. |+.+. +.+. ..|+.+. ++.+.+. +++++.+.+.
T Consensus 91 v~vH~~~~~~---------~---~~~~~~~i~~~--g~~ig--v~~~-p~t~~e~---~~~~~~~~~~~d~vl~~sv 147 (228)
T 1h1y_A 91 FTFHIEVSRD---------N---WQELIQSIKAK--GMRPG--VSLR-PGTPVEE---VFPLVEAENPVELVLVMTV 147 (228)
T ss_dssp EEEEGGGCTT---------T---HHHHHHHHHHT--TCEEE--EEEC-TTSCGGG---GHHHHHSSSCCSEEEEESS
T ss_pred EEECCCCccc---------H---HHHHHHHHHHc--CCCEE--EEEe-CCCCHHH---HHHHHhcCCCCCEEEEEee
Confidence 9876543211 1 13556677777 87553 2222 2343332 3334455 7898888633
No 163
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=76.00 E-value=13 Score=32.26 Aligned_cols=75 Identities=12% Similarity=0.084 Sum_probs=37.7
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
...++.+.+.|++.+.+.--+.| .. .-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.+.
T Consensus 35 ~~lv~~li~~Gv~gl~v~GtTGE-~~-----~Ls~~Er~~v~~~~~~~~~g---rvpviaGvg~~~t~~ai~la~~a~~~ 105 (318)
T 3qfe_A 35 ERYYAYLARSGLTGLVILGTNAE-AF-----LLTREERAQLIATARKAVGP---DFPIMAGVGAHSTRQVLEHINDASVA 105 (318)
T ss_dssp HHHHHHHHTTTCSEEEESSGGGT-GG-----GSCHHHHHHHHHHHHHHHCT---TSCEEEECCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeCccccC-hh-----hCCHHHHHHHHHHHHHHhCC---CCcEEEeCCCCCHHHHHHHHHHHHHc
Confidence 44555555566666544221111 11 12556666666665554212 12345566 45666666666666666
Q ss_pred CCCEE
Q psy2895 233 NIDIL 237 (293)
Q Consensus 233 ~~~~i 237 (293)
|+|-+
T Consensus 106 Gadav 110 (318)
T 3qfe_A 106 GANYV 110 (318)
T ss_dssp TCSEE
T ss_pred CCCEE
Confidence 66654
No 164
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=75.96 E-value=13 Score=31.53 Aligned_cols=74 Identities=8% Similarity=0.068 Sum_probs=48.3
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCC-Cc------CcHHHHHHHH
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPD-FR------NQINHVLKIF 160 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~-~~------~~~~e~l~~l 160 (293)
+++..+.+..+.+.++ +..+-|.+|... +. +.+.+.++..++. +|.+++.| +. +..++.++..
T Consensus 50 lg~~~~~DlLe~ag~y-ID~lKfg~GTs~-l~----~~l~ekI~l~~~~----gV~v~~GGTlfE~~l~qg~~~~yl~~~ 119 (276)
T 1u83_A 50 YPLQFFKDAIAGASDY-IDFVKFGWGTSL-LT----KDLEEKISTLKEH----DITFFFGGTLFEKYVSQKKVNEFHRYC 119 (276)
T ss_dssp CCHHHHHHHHHHHGGG-CCEEEECTTGGG-GC----TTHHHHHHHHHHT----TCEEEECHHHHHHHHHTTCHHHHHHHH
T ss_pred CCHHHHHHHHHHhhhh-cceEEecCcchh-hh----HHHHHHHHHHHHc----CCeEeCCcHHHHHHHHcCcHHHHHHHH
Confidence 5666666665555444 677778887742 32 1277777777765 46666544 21 2347888999
Q ss_pred HHcCCCeeeec
Q psy2895 161 KQALPDVLNHN 171 (293)
Q Consensus 161 ~~aG~~~i~~~ 171 (293)
++.|++.+-++
T Consensus 120 k~lGF~~IEIS 130 (276)
T 1u83_A 120 TYFGCEYIEIS 130 (276)
T ss_dssp HHTTCSEEEEC
T ss_pred HHcCCCEEEEC
Confidence 99999988775
No 165
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=75.76 E-value=14 Score=30.84 Aligned_cols=17 Identities=6% Similarity=-0.173 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHhCCCce
Q psy2895 188 YKHSLNLLKNFKKLYPNIL 206 (293)
Q Consensus 188 ~e~~l~~i~~~~~~~pgi~ 206 (293)
.+...+.++.+++. |..
T Consensus 83 ~~~~~~~i~~A~~l--G~~ 99 (286)
T 3dx5_A 83 IEKCEQLAILANWF--KTN 99 (286)
T ss_dssp HHHHHHHHHHHHHH--TCC
T ss_pred HHHHHHHHHHHHHh--CCC
Confidence 34455566666666 653
No 166
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=75.49 E-value=32 Score=28.17 Aligned_cols=82 Identities=13% Similarity=0.066 Sum_probs=50.9
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecC-CCCCCC---------------ChhHHHHHHHHHHhhCCCcEEEEEc--C-CC
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNR-DDLHDG---------------GSSHFVSCIKHIRKLSTKIKIEILI--P-DF 149 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~-~~l~~~---------------~~~~~~~ll~~i~~~~~~~~i~~~~--~-~~ 149 (293)
+.++..+.++.+.+. ++.+.+.--.. |.+ +. +.....++++.+++.. +..+.+.+ + -+
T Consensus 17 ~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~-DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~-~~pv~~~~~~~~~~ 93 (248)
T 1geq_A 17 DKQSTLNFLLALDEY-AGAIELGIPFSDPIA-DGKTIQESHYRALKNGFKLREAFWIVKEFRRHS-STPIVLMTYYNPIY 93 (248)
T ss_dssp CHHHHHHHHHHHGGG-BSCEEEECCCSCCTT-SCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTC-CCCEEEEECHHHHH
T ss_pred CHHHHHHHHHHHHHc-CCEEEECCCCCCCCC-CCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhC-CCCEEEEeccchhh
Confidence 447888888888887 88777652110 111 11 2345578888888764 34566543 1 11
Q ss_pred cCcHHHHHHHHHHcCCCeeeeccc
Q psy2895 150 RNQINHVLKIFKQALPDVLNHNIE 173 (293)
Q Consensus 150 ~~~~~e~l~~l~~aG~~~i~~~le 173 (293)
.....+.++.+.++|++.+.++-.
T Consensus 94 ~~~~~~~~~~~~~~Gad~v~~~~~ 117 (248)
T 1geq_A 94 RAGVRNFLAEAKASGVDGILVVDL 117 (248)
T ss_dssp HHCHHHHHHHHHHHTCCEEEETTC
T ss_pred hcCHHHHHHHHHHCCCCEEEECCC
Confidence 111146888899999999998743
No 167
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=75.44 E-value=38 Score=28.94 Aligned_cols=105 Identities=17% Similarity=0.219 Sum_probs=67.3
Q ss_pred hHHHHHHHHHHhhCCCcEEEEEc-C-CCcCcHHHHHHHHHHcCCCeeeecccc---chHHHh-hcC-CCCCHHHHHHHHH
Q psy2895 124 SHFVSCIKHIRKLSTKIKIEILI-P-DFRNQINHVLKIFKQALPDVLNHNIET---VPRLYK-KVR-PGSDYKHSLNLLK 196 (293)
Q Consensus 124 ~~~~~ll~~i~~~~~~~~i~~~~-~-~~~~~~~e~l~~l~~aG~~~i~~~les---s~~~~~-~i~-~~~~~e~~l~~i~ 196 (293)
+-+.++.+++--...++.+-.-. + +-.......++.|+++|+..+ ++.-| .+-.++ .+- .+.++++..+.++
T Consensus 79 ~iv~e~~~evlp~v~~iPV~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~ 157 (286)
T 2p10_A 79 QIVVDMAREVLPVVRHTPVLAGVNGTDPFMVMSTFLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIA 157 (286)
T ss_dssp HHHHHHHHHHGGGCSSSCEEEEECTTCTTCCHHHHHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHhhhccCCCCCEEEEECCcCCCcCHHHHHHHHHHhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHH
Confidence 34556666655444444444422 1 322233778899999999998 66554 143333 343 5679999999999
Q ss_pred HHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 197 NFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 197 ~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
.+++. |+.+... -.|+++- ..+.++|+|.+-++
T Consensus 158 ~A~~~--gL~Ti~~-----v~~~eeA----~amA~agpDiI~~h 190 (286)
T 2p10_A 158 EAHKL--DLLTTPY-----VFSPEDA----VAMAKAGADILVCH 190 (286)
T ss_dssp HHHHT--TCEECCE-----ECSHHHH----HHHHHHTCSEEEEE
T ss_pred HHHHC--CCeEEEe-----cCCHHHH----HHHHHcCCCEEEEC
Confidence 99999 9954222 2355554 34567999998886
No 168
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=75.36 E-value=37 Score=28.75 Aligned_cols=120 Identities=14% Similarity=0.159 Sum_probs=71.3
Q ss_pred hhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeee
Q psy2895 90 IEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLN 169 (293)
Q Consensus 90 ~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~ 169 (293)
...+.+.++.+.+.|+..|.+..-+. + +..-.+.++.+++.. ++.+- .-+++-+ +..++..+++|.|.+.
T Consensus 71 ~~~p~~~A~~y~~~GA~~isvltd~~--~----f~Gs~~~l~~ir~~v-~lPvl--~kdfiid-~~qv~~A~~~GAD~Vl 140 (272)
T 3qja_A 71 IADPAKLAQAYQDGGARIVSVVTEQR--R----FQGSLDDLDAVRASV-SIPVL--RKDFVVQ-PYQIHEARAHGADMLL 140 (272)
T ss_dssp --CHHHHHHHHHHTTCSEEEEECCGG--G----HHHHHHHHHHHHHHC-SSCEE--EESCCCS-HHHHHHHHHTTCSEEE
T ss_pred CCCHHHHHHHHHHcCCCEEEEecChh--h----cCCCHHHHHHHHHhC-CCCEE--ECccccC-HHHHHHHHHcCCCEEE
Confidence 34566777888888999886653221 2 222234556666543 22332 2244432 5567888889999999
Q ss_pred eccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEeec
Q psy2895 170 HNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQ 241 (293)
Q Consensus 170 ~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~~ 241 (293)
++.... +.++..+.++.+++. |+.+ ++. -.|.+++.. +.++|++.+.+++
T Consensus 141 Li~a~l-----------~~~~l~~l~~~a~~l--Gl~~----lve-v~t~ee~~~----A~~~Gad~IGv~~ 190 (272)
T 3qja_A 141 LIVAAL-----------EQSVLVSMLDRTESL--GMTA----LVE-VHTEQEADR----ALKAGAKVIGVNA 190 (272)
T ss_dssp EEGGGS-----------CHHHHHHHHHHHHHT--TCEE----EEE-ESSHHHHHH----HHHHTCSEEEEES
T ss_pred EecccC-----------CHHHHHHHHHHHHHC--CCcE----EEE-cCCHHHHHH----HHHCCCCEEEECC
Confidence 864321 244555667778888 8864 222 245565433 3467999999874
No 169
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=75.27 E-value=44 Score=29.63 Aligned_cols=97 Identities=12% Similarity=0.185 Sum_probs=63.1
Q ss_pred hhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhC
Q psy2895 123 SSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLY 202 (293)
Q Consensus 123 ~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~ 202 (293)
.+.+.+.++.+++..+ +.+.+.+. ......+.++.+.++|++.+.+.. + .+ ..+.+++.++.+++.+
T Consensus 81 ~e~~~~~i~~vk~~~~-l~vga~vg-~~~~~~~~~~~lieaGvd~I~idt--a--------~G-~~~~~~~~I~~ik~~~ 147 (366)
T 4fo4_A 81 IEQQAAQVHQVKISGG-LRVGAAVG-AAPGNEERVKALVEAGVDVLLIDS--S--------HG-HSEGVLQRIRETRAAY 147 (366)
T ss_dssp HHHHHHHHHHHHTTTS-CCCEEECC-SCTTCHHHHHHHHHTTCSEEEEEC--S--------CT-TSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCc-eeEEEEec-cChhHHHHHHHHHhCCCCEEEEeC--C--------CC-CCHHHHHHHHHHHHhc
Confidence 5678888888887532 33444331 111126789999999999887642 1 12 3457888999999997
Q ss_pred CCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 203 PNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 203 pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
|++.+ ++|..-|.++. +.+.+.|+|.+.+.
T Consensus 148 p~v~V----i~G~v~t~e~A----~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 148 PHLEI----IGGNVATAEGA----RALIEAGVSAVKVG 177 (366)
T ss_dssp TTCEE----EEEEECSHHHH----HHHHHHTCSEEEEC
T ss_pred CCCce----EeeeeCCHHHH----HHHHHcCCCEEEEe
Confidence 77654 34544566664 44456799998873
No 170
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=75.26 E-value=4.7 Score=33.53 Aligned_cols=74 Identities=15% Similarity=0.122 Sum_probs=48.5
Q ss_pred hHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcCcHHHHHHHHHHcCCCeee
Q psy2895 91 EEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRNQINHVLKIFKQALPDVLN 169 (293)
Q Consensus 91 eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~~~~e~l~~l~~aG~~~i~ 169 (293)
.+..+.++.+.+.|++.++++..+.... .. ..-.++++.+++.. .+.+... ++.+ .+.++.+.++|++.+.
T Consensus 35 ~~~~~~a~~~~~~G~~~i~v~d~~~~~~-~~--~~~~~~i~~i~~~~---~ipvi~~Ggi~~--~~~~~~~l~~Gad~V~ 106 (247)
T 3tdn_A 35 ILLRDWVVEVEKRGAGEILLTSIDRDGT-KS--GYDTEMIRFVRPLT---TLPIIASGGAGK--MEHFLEAFLRGADKVS 106 (247)
T ss_dssp EEHHHHHHHHHHTTCSEEEEEETTTTTC-SS--CCCHHHHHHHGGGC---CSCEEEESCCCS--HHHHHHHHHTTCSEEC
T ss_pred CCHHHHHHHHHHcCCCEEEEEecCcccC-CC--cccHHHHHHHHHhC---CCCEEEeCCCCC--HHHHHHHHHcCCCeee
Confidence 3567788888899999999887653211 11 12246778887753 2333333 4444 6778888889999998
Q ss_pred ecc
Q psy2895 170 HNI 172 (293)
Q Consensus 170 ~~l 172 (293)
++-
T Consensus 107 ig~ 109 (247)
T 3tdn_A 107 INT 109 (247)
T ss_dssp CSH
T ss_pred hhh
Confidence 874
No 171
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=74.76 E-value=43 Score=30.09 Aligned_cols=130 Identities=15% Similarity=0.096 Sum_probs=70.1
Q ss_pred HHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeeccc
Q psy2895 94 KKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIE 173 (293)
Q Consensus 94 ~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~le 173 (293)
.+.++.+.+.|++.|++..... . ...+.+.++.+++.. +..+-+ ....+ .+.++.+.++|+|.+.++.+
T Consensus 146 ~e~~~~lveaGvdvIvldta~G--~----~~~~~e~I~~ik~~~-~i~Vi~--g~V~t--~e~A~~a~~aGAD~I~vG~g 214 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHG--H----SLNIIRTLKEIKSKM-NIDVIV--GNVVT--EEATKELIENGADGIKVGIG 214 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCC--S----BHHHHHHHHHHHTTC-CCEEEE--EEECS--HHHHHHHHHTTCSEEEECC-
T ss_pred HHHHHHHHHcCCCEEEEeCCCC--C----cccHHHHHHHHHhcC-CCeEEE--eecCC--HHHHHHHHHcCCCEEEEeCC
Confidence 5667777888999888743322 1 246788899998865 333332 11223 66788888999999988654
Q ss_pred c-chHHHhhcC-CCC-CHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEeecCC
Q psy2895 174 T-VPRLYKKVR-PGS-DYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYL 243 (293)
Q Consensus 174 s-s~~~~~~i~-~~~-~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~~~~ 243 (293)
. +-...+.+. .+. ++.-+.++.+.+++. ++++-+ -|=--|.+|+.+.+ .+|.+.+.+...+
T Consensus 215 ~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~--~IPVIA---~GGI~~~~di~kal----alGAd~V~vGt~f 278 (400)
T 3ffs_A 215 PGSICTTRIVAGVGVPQITAIEKCSSVASKF--GIPIIA---DGGIRYSGDIGKAL----AVGASSVMIGSIL 278 (400)
T ss_dssp --------CCSCBCCCHHHHHHHHHHHHTTT--TCCEEE---ESCCCSHHHHHHHH----TTTCSEEEECGGG
T ss_pred CCcCcccccccccchhHHHHHHHHHHHHHhc--CCCEEe---cCCCCCHHHHHHHH----HcCCCEEEEChHH
Confidence 3 211111111 111 232233333333333 554321 12124667766654 4799988876443
No 172
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=74.63 E-value=17 Score=31.85 Aligned_cols=78 Identities=14% Similarity=0.052 Sum_probs=51.9
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCC-C-CCCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcCcHHHHHHHHHHcC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRD-D-LHDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRNQINHVLKIFKQAL 164 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~-~-l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~~~~e~l~~l~~aG 164 (293)
.+.++..+.++.+.+.|+..|.++++... . .+. ......+.++.+++.. .+-+... ++.+ .+.++.+-+.|
T Consensus 226 ~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~-~~~~~~~~~~~ir~~~---~iPVi~~Ggi~s--~~~a~~~l~~G 299 (338)
T 1z41_A 226 LDIADHIGFAKWMKEQGVDLIDCSSGALVHADINV-FPGYQVSFAEKIREQA---DMATGAVGMITD--GSMAEEILQNG 299 (338)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCC-CTTTTHHHHHHHHHHH---CCEEEECSSCCS--HHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCC-CccchHHHHHHHHHHC---CCCEEEECCCCC--HHHHHHHHHcC
Confidence 57889999999999999999999887421 0 111 1112346677777753 3455544 5545 66666666777
Q ss_pred -CCeeeec
Q psy2895 165 -PDVLNHN 171 (293)
Q Consensus 165 -~~~i~~~ 171 (293)
+|.+.++
T Consensus 300 ~aD~V~iG 307 (338)
T 1z41_A 300 RADLIFIG 307 (338)
T ss_dssp SCSEEEEC
T ss_pred CceEEeec
Confidence 9999886
No 173
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=74.57 E-value=37 Score=28.39 Aligned_cols=110 Identities=10% Similarity=0.140 Sum_probs=57.9
Q ss_pred HHHHHHHHHHhhCCCcEEEEE-cC-----------CC-cCcHHHHHHHHHHcCCCeeee-cc---ccc--hHH---Hhh-
Q psy2895 125 HFVSCIKHIRKLSTKIKIEIL-IP-----------DF-RNQINHVLKIFKQALPDVLNH-NI---ETV--PRL---YKK- 181 (293)
Q Consensus 125 ~~~~ll~~i~~~~~~~~i~~~-~~-----------~~-~~~~~e~l~~l~~aG~~~i~~-~l---ess--~~~---~~~- 181 (293)
.+..+.+.+++.+|+..++.. ++ +. ...+.+.++.|.+.|++.+.+ ++ .+. +++ .+.
T Consensus 21 ~~~~~~~~v~~~~p~~~V~~af~s~~i~~~l~~~~g~~~psi~~aL~~l~~~G~~~vvV~Pl~l~~G~~~~di~~~v~~~ 100 (264)
T 2xwp_A 21 NIVACERDLAASCPDRDLFRAFTSGMIIRKLRQRDGIDIDTPLQALQKLAAQGYQDVAIQSLHIINGDEYEKIVREVQLL 100 (264)
T ss_dssp HHHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHCCCCCCHHHHHHHHHHHTCCEEEEEECCSSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCeEEeehhhHHHHHHHHHhcCCCCCCHHHHHHHHHhCCCCEEEEEeCcccCcHHHHHHHHHHHHH
Confidence 555666777777777777663 31 11 123467788888888887542 22 111 121 111
Q ss_pred ------cC--C--CCCHHHHHHHHHHHHHhCCCce-eeEeEEeecCCC---HHHHHHHHHHHHhCCC
Q psy2895 182 ------VR--P--GSDYKHSLNLLKNFKKLYPNIL-TKSGIMVGLGEN---DEEILTVIHDMRNHNI 234 (293)
Q Consensus 182 ------i~--~--~~~~e~~l~~i~~~~~~~pgi~-~~~~~ivG~gEt---~ed~~~~l~~l~~l~~ 234 (293)
+. + ..+.+++-...+.+.+..+... -..-+++|+|-. ..++..+...+++.+.
T Consensus 101 ~~~~~~i~~~~pl~~~~~~~~~l~~~l~~~~~~~~~~~~lvl~gHGs~~~~~~~~~~~a~~l~~~~~ 167 (264)
T 2xwp_A 101 RPLFTRLTLGVPLLSSHNDYVQLMQALRQQMPSLRQTEKVVFMGHGASHHAFAAYACLDHMMTAQRF 167 (264)
T ss_dssp GGGCSEEEEECCSSCSHHHHHHHHHHHHTTSCCCCTTEEEEEEECCCSSGGGHHHHHHHHHHHHTTC
T ss_pred HhhCCceEEecCCCCCHHHHHHHHHHHHHhccccCCCCeEEEEECCCCchhhHHHHHHHHHHHhhCC
Confidence 11 1 2245555555555555443321 224567777533 3455556566677764
No 174
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=74.45 E-value=12 Score=32.87 Aligned_cols=79 Identities=13% Similarity=-0.012 Sum_probs=51.2
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCC-CCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcCcHHHHHHHHHHcC-
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLH-DGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRNQINHVLKIFKQAL- 164 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~-~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~~~~e~l~~l~~aG- 164 (293)
.+.++..+.++.+.+.|+..|.++.|....-. ........++++.+++.. .+-+... ++.+ .+.++.+-+.|
T Consensus 226 ~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~---~iPVi~~GgI~s--~e~a~~~L~~G~ 300 (340)
T 3gr7_A 226 LTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA---DIPTGAVGLITS--GWQAEEILQNGR 300 (340)
T ss_dssp CCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT---TCCEEEESSCCC--HHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc---CCcEEeeCCCCC--HHHHHHHHHCCC
Confidence 57889999999999999999999865321100 001123456777887764 2334333 4444 66666666777
Q ss_pred CCeeeec
Q psy2895 165 PDVLNHN 171 (293)
Q Consensus 165 ~~~i~~~ 171 (293)
+|.+.++
T Consensus 301 aD~V~iG 307 (340)
T 3gr7_A 301 ADLVFLG 307 (340)
T ss_dssp CSEEEEC
T ss_pred eeEEEec
Confidence 9998886
No 175
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=73.86 E-value=43 Score=28.89 Aligned_cols=135 Identities=9% Similarity=0.057 Sum_probs=75.2
Q ss_pred HHHHHCCCcEEEEee-------ecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcC--cHHHHHHHHHHcCCCe
Q psy2895 98 YTINKLKLNYVVITS-------VNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRN--QINHVLKIFKQALPDV 167 (293)
Q Consensus 98 ~~~~~~G~~~i~l~g-------g~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~--~~~e~l~~l~~aG~~~ 167 (293)
+.+.+.|++-|.++| |. ||....+.+.+...++.|.+.. +..|-+=.+ |+.+ +..+.++.+.++|+..
T Consensus 43 ~l~e~aG~dai~vs~~s~a~~~G~-pD~~~vt~~em~~~~~~I~r~~-~~pviaD~d~Gyg~~~~v~~~v~~l~~aGaag 120 (305)
T 3ih1_A 43 LVARNTGFLALYLSGAAYTASKGL-PDLGIVTSTEVAERARDLVRAT-DLPVLVDIDTGFGGVLNVARTAVEMVEAKVAA 120 (305)
T ss_dssp HHHHHTTCSCEEECHHHHHHHHTC-CSSSCSCHHHHHHHHHHHHHHH-CCCEEEECTTCSSSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHcCCCEEEECcHHHHHhCCC-CCCCcCCHHHHHHHHHHHHHhc-CCCEEEECCCCCCCHHHHHHHHHHHHHhCCcE
Confidence 334456888887776 33 3332234566666666665542 223333223 4433 1245677788899988
Q ss_pred eeeccccchHHHhhcCC--CCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCC-----HHHHHHHHHHHHhCCCCEEEe
Q psy2895 168 LNHNIETVPRLYKKVRP--GSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGEN-----DEEILTVIHDMRNHNIDILTI 239 (293)
Q Consensus 168 i~~~less~~~~~~i~~--~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt-----~ed~~~~l~~l~~l~~~~i~i 239 (293)
+++-=+..++..-.+.. -.+.++..+.|+.++++ |.. .+|++-.+. .++..+-.....+.|.+.+.+
T Consensus 121 v~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A--~~~---~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~ 194 (305)
T 3ih1_A 121 VQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV--APS---LYIVARTDARGVEGLDEAIERANAYVKAGADAIFP 194 (305)
T ss_dssp EEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH--CTT---SEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEE
T ss_pred EEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc--CCC---eEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEE
Confidence 77532222221111111 12678888888888888 542 134443333 455666666667788888776
No 176
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=73.83 E-value=30 Score=30.19 Aligned_cols=85 Identities=11% Similarity=0.149 Sum_probs=53.0
Q ss_pred HHHHHHHHcCCCeeeeccc-c--chHHHhhc-C-C----CCCHHH----HHHHHHHHHHhCCCceeeEeEEee---c-CC
Q psy2895 155 HVLKIFKQALPDVLNHNIE-T--VPRLYKKV-R-P----GSDYKH----SLNLLKNFKKLYPNILTKSGIMVG---L-GE 217 (293)
Q Consensus 155 e~l~~l~~aG~~~i~~~le-s--s~~~~~~i-~-~----~~~~e~----~l~~i~~~~~~~pgi~~~~~~ivG---~-gE 217 (293)
+..++.+++|.|.|.+..- + ....+.-. + | +.+.+. .+++++.++++. ++++..-+-.. - |.
T Consensus 148 ~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~pv~vris~~~~~~~g~ 226 (338)
T 1z41_A 148 QAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGPLFVRVSASDYTDKGL 226 (338)
T ss_dssp HHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEECCCCSTTSC
T ss_pred HHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCcEEEEecCcccCCCCC
Confidence 4456667889999876431 1 12222111 1 1 234544 477788888875 45444333221 1 56
Q ss_pred CHHHHHHHHHHHHhCCCCEEEee
Q psy2895 218 NDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 218 t~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
+.++..+.++.+.+.|++.+.+.
T Consensus 227 ~~~~~~~~a~~l~~~Gvd~i~v~ 249 (338)
T 1z41_A 227 DIADHIGFAKWMKEQGVDLIDCS 249 (338)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEe
Confidence 78899999999999999999986
No 177
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=73.48 E-value=45 Score=28.96 Aligned_cols=140 Identities=13% Similarity=0.095 Sum_probs=72.1
Q ss_pred HHHHCCCcEEEEe-eecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEc------CC-------CcCc-----------H
Q psy2895 99 TINKLKLNYVVIT-SVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILI------PD-------FRNQ-----------I 153 (293)
Q Consensus 99 ~~~~~G~~~i~l~-gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~------~~-------~~~~-----------~ 153 (293)
.+.+.|++.|.+- -++| .-...+.+++.++++.+++.+-.+-+.+.. |+ .... .
T Consensus 35 ilk~~G~N~VRi~~w~~P-~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd~WadPg~Q~~p~~W~~~~~~~~~~~~~yt 113 (332)
T 1hjs_A 35 ILAANGVNTVRQRVWVNP-ADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSDTWADPAHQTMPAGWPSDIDNLSWKLYNYT 113 (332)
T ss_dssp HHHHTTCCEEEEEECSSC-TTCTTSHHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBCBCCTTCCCSHHHHHHHHHHHH
T ss_pred HHHHCCCCEEEEeeeeCC-CCCcCCHHHHHHHHHHHHHCCCEEEEEeccCCCcCCccccCCccccccchHHHHHHHHHHH
Confidence 3456788887764 2222 101124677888888888874222333322 21 1100 1
Q ss_pred HHHHHHHHHcC--CCeeeeccccchHHHhhcCCCCCHHHHH----HHHHHHHHhC--CCceeeEeEEeec--CCCHHHHH
Q psy2895 154 NHVLKIFKQAL--PDVLNHNIETVPRLYKKVRPGSDYKHSL----NLLKNFKKLY--PNILTKSGIMVGL--GENDEEIL 223 (293)
Q Consensus 154 ~e~l~~l~~aG--~~~i~~~less~~~~~~i~~~~~~e~~l----~~i~~~~~~~--pgi~~~~~~ivG~--gEt~ed~~ 223 (293)
.+.++.|++.| ++.+.++-|.+..++--.....+.+... +.++.+|+.. |+.. +++.+ +.+.+.+.
T Consensus 114 ~~vl~~l~~~g~~~~~v~vGNEi~~g~~w~~g~~~~~~~~~~l~~~~~~avR~~~~~p~~~----v~ih~~~~~~~~~~~ 189 (332)
T 1hjs_A 114 LDAANKLQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIARLLHSAAWGIKDSSLSPKPK----IMIHLDNGWDWGTQN 189 (332)
T ss_dssp HHHHHHHHHTTCCCSEEEESSSGGGEETBTTEETTCHHHHHHHHHHHHHHHHTSCCSSCCE----EEEEESCTTCHHHHH
T ss_pred HHHHHHHHHcCCCCCEEEEeecccccccCcCCCccCHHHHHHHHHHHHHHHHHhccCCCCe----EEEEeCCccchHHHH
Confidence 47788888876 5556666665221110000011333333 3344566664 4443 34444 55666666
Q ss_pred HHHHHHHhCC------CCEEEeecCCC
Q psy2895 224 TVIHDMRNHN------IDILTIGQYLM 244 (293)
Q Consensus 224 ~~l~~l~~l~------~~~i~i~~~~~ 244 (293)
.-++.+.+.+ +|.|.++ |.+
T Consensus 190 ~~~d~~~~~g~~~~~~~DvIG~s-yYp 215 (332)
T 1hjs_A 190 WWYTNVLKQGTLELSDFDMMGVS-FYP 215 (332)
T ss_dssp HHHHHHHTTSSSCGGGCCEEEEE-CCS
T ss_pred HHHHHHHhcCCCCCCCcCEEEEe-cCc
Confidence 6667666555 6889887 554
No 178
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=72.98 E-value=41 Score=28.85 Aligned_cols=146 Identities=10% Similarity=0.025 Sum_probs=82.8
Q ss_pred CcCcccCCCCCCCCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCC---CChhHHHHHHHHHHhhCCCcEEEEEc-CCCc
Q psy2895 75 CKFCNISHGRPDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHD---GGSSHFVSCIKHIRKLSTKIKIEILI-PDFR 150 (293)
Q Consensus 75 C~fC~~~~~~~~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~---~~~~~~~~ll~~i~~~~~~~~i~~~~-~~~~ 150 (293)
|+-+.||.|. .+.+.-..+++.+.+.|+.+|-+.-.- ..+.. .+.+.+.+-++.+++...+..+++.. .+.+
T Consensus 87 ~tVigFP~G~---~~~e~K~~Ea~~Av~~GAdEIDmVini-g~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt~~L 162 (297)
T 4eiv_A 87 CAAVNFPEGT---GTPDTVSLEAVGALKDGADEIECLIDW-RRMNENVADGESRIRLLVSEVKKVVGPKTLKVVLSGGEL 162 (297)
T ss_dssp EEEESTTTCC---CCHHHHHHHHHHHHHTTCSEEEEECCT-HHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEECCSSCC
T ss_pred EEEecCCCCC---CCHHHHHHHHHHHHHcCCCEEEeeeeH-HHHhcccCCcHHHHHHHHHHHHHHhcCCceEEEEecccC
Confidence 4445677653 567888888999999999998443111 00112 23566777777777765556788765 3555
Q ss_pred CcHHHH----HHHHHHcCCCeeeec--cccchHHHhhcCCCCCHHHHHHHHHHHHHhC-------------------CCc
Q psy2895 151 NQINHV----LKIFKQALPDVLNHN--IETVPRLYKKVRPGSDYKHSLNLLKNFKKLY-------------------PNI 205 (293)
Q Consensus 151 ~~~~e~----l~~l~~aG~~~i~~~--less~~~~~~i~~~~~~e~~l~~i~~~~~~~-------------------pgi 205 (293)
++ ++. .+...++|.|.+.-+ .. ..+-+.+++.-..+.+++.+ +.+
T Consensus 163 t~-~e~i~~A~~ia~~AGADFVKTSTGf~---------~~gAT~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~v 232 (297)
T 4eiv_A 163 QG-GDIISRAAVAALEGGADFLQTSSGLG---------ATHATMFTVHLISIALREYMVRENERIRVEGINREGAAVRCI 232 (297)
T ss_dssp CC-HHHHHHHHHHHHHHTCSEEECCCSSS---------SCCCCHHHHHHHHHHHHHHHCC------------------CC
T ss_pred Cc-HHHHHHHHHHHHHhCCCEEEcCCCCC---------CCCCCHHHHHHHHHHHHHHhccccccccccccccccccCCce
Confidence 43 342 233456899988532 11 11234444433333332110 112
Q ss_pred eeeEeEEeecCCCHHHHHHHHHHHHhCCCCE
Q psy2895 206 LTKSGIMVGLGENDEEILTVIHDMRNHNIDI 236 (293)
Q Consensus 206 ~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~ 236 (293)
.+.+ -+|=--|.++..+.++.++++|.++
T Consensus 233 gvKA--s~GGIrt~e~A~~~i~~~~elG~~w 261 (297)
T 4eiv_A 233 GIKI--EVGDVHMAETADFLMQMIFENGPRS 261 (297)
T ss_dssp EEEE--ECTTCCHHHHHHHHHHHHHHHCGGG
T ss_pred eEEe--cCCCCCCHHHHHHHHHHHHHhCccc
Confidence 2211 1132478899999999998888874
No 179
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=72.67 E-value=39 Score=27.81 Aligned_cols=97 Identities=13% Similarity=0.223 Sum_probs=58.8
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeec---CCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcCCCcCcHHHHHHHHHHc
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVN---RDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIPDFRNQINHVLKIFKQA 163 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~---~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~~~~~~~~e~l~~l~~a 163 (293)
.+.-.+.+.++.+ +.|++.+++---+ .|.+. .=..+++.+++.. ..+.+++++.+ . ...++.+.++
T Consensus 10 ~D~~~l~~~i~~~-~~gad~lHvDvmDG~fvpn~t-----~G~~~v~~lr~~~~~~~dvhLmv~d-p---~~~i~~~~~a 79 (231)
T 3ctl_A 10 MDLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLT-----LSPFFVSQVKKLATKPLDCHLMVTR-P---QDYIAQLARA 79 (231)
T ss_dssp SCGGGHHHHHHHH-HTTCSCEEEEEECSSSSSCCC-----BCHHHHHHHHTTCCSCEEEEEESSC-G---GGTHHHHHHH
T ss_pred CChhhHHHHHHHH-HcCCCEEEEEEEeCccCccch-----hcHHHHHHHHhccCCcEEEEEEecC-H---HHHHHHHHHc
Confidence 3455677777888 8898876554222 22221 1235777777753 12467776632 1 3357888899
Q ss_pred CCCeeeecccc-chHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeE
Q psy2895 164 LPDVLNHNIET-VPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKS 209 (293)
Q Consensus 164 G~~~i~~~les-s~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~ 209 (293)
|.|.+.+..|+ .+ + ..+.++.+++. |+.+..
T Consensus 80 GAd~itvh~Ea~~~----------~---~~~~i~~i~~~--G~k~gv 111 (231)
T 3ctl_A 80 GADFITLHPETING----------Q---AFRLIDEIRRH--DMKVGL 111 (231)
T ss_dssp TCSEEEECGGGCTT----------T---HHHHHHHHHHT--TCEEEE
T ss_pred CCCEEEECcccCCc----------c---HHHHHHHHHHc--CCeEEE
Confidence 99999987665 21 1 23566777777 876533
No 180
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=72.57 E-value=12 Score=30.70 Aligned_cols=77 Identities=14% Similarity=0.224 Sum_probs=50.7
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCee
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVL 168 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i 168 (293)
..++..+.++.+.+.|++.+.++..... . .......++++.+++.. ++.+-+. .+..+ .+.++.+.++|++.+
T Consensus 31 ~~~~~~~~a~~~~~~G~d~i~v~~~~~~-~--~~~~~~~~~i~~i~~~~-~ipvi~~-g~i~~--~~~~~~~~~~Gad~V 103 (253)
T 1h5y_A 31 EVGDPVEMAVRYEEEGADEIAILDITAA-P--EGRATFIDSVKRVAEAV-SIPVLVG-GGVRS--LEDATTLFRAGADKV 103 (253)
T ss_dssp EEECHHHHHHHHHHTTCSCEEEEECCCC-T--TTHHHHHHHHHHHHHHC-SSCEEEE-SSCCS--HHHHHHHHHHTCSEE
T ss_pred ecccHHHHHHHHHHcCCCEEEEEeCCcc-c--cCCcccHHHHHHHHHhc-CCCEEEE-CCCCC--HHHHHHHHHcCCCEE
Confidence 3567888889999999998888754321 1 12334567788888754 2333332 13333 667788888999999
Q ss_pred eecc
Q psy2895 169 NHNI 172 (293)
Q Consensus 169 ~~~l 172 (293)
.++.
T Consensus 104 ~i~~ 107 (253)
T 1h5y_A 104 SVNT 107 (253)
T ss_dssp EESH
T ss_pred EECh
Confidence 9874
No 181
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=72.52 E-value=27 Score=29.28 Aligned_cols=138 Identities=13% Similarity=0.153 Sum_probs=65.7
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCee
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVL 168 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i 168 (293)
++++.+ +++.+.|++.|++.--.. .+.....++.+.++..+..+| .+++..|-..+ ++.++.+.++-.+.+
T Consensus 61 si~~aL---~~l~~~G~~~vvV~Pl~l--~~G~~~~di~~~v~~~~~~~~--~i~~~~pl~~~--~~~~~~l~~~l~~~~ 131 (264)
T 2xwp_A 61 TPLQAL---QKLAAQGYQDVAIQSLHI--INGDEYEKIVREVQLLRPLFT--RLTLGVPLLSS--HNDYVQLMQALRQQM 131 (264)
T ss_dssp CHHHHH---HHHHHHTCCEEEEEECCS--SSSHHHHHHHHHHHHHGGGCS--EEEEECCSSCS--HHHHHHHHHHHHTTS
T ss_pred CHHHHH---HHHHhCCCCEEEEEeCcc--cCcHHHHHHHHHHHHHHhhCC--ceEEecCCCCC--HHHHHHHHHHHHHhc
Confidence 445444 667778999998875442 122122344444455555555 56665551122 333333322210111
Q ss_pred eeccccchHHHhhcCC--CCC-HHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEeecCC
Q psy2895 169 NHNIETVPRLYKKVRP--GSD-YKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYL 243 (293)
Q Consensus 169 ~~~less~~~~~~i~~--~~~-~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~~~~ 243 (293)
. .....+.+. .+.. ++. -..+...-+.+++. |. .+-+|+-|..-.+.+.++.+.+.|...|.+.|++
T Consensus 132 ~-~~~~~~~lv-l~gHGs~~~~~~~~~~~a~~l~~~--~~----~v~~g~~e~~P~~~~~l~~l~~~G~~~v~v~P~~ 201 (264)
T 2xwp_A 132 P-SLRQTEKVV-FMGHGASHHAFAAYACLDHMMTAQ--RF----PARVGAVESYPEVDILIDSLRDEGVTGVHLMPLM 201 (264)
T ss_dssp C-CCCTTEEEE-EEECCCSSGGGHHHHHHHHHHHHT--TC----SEEEEESSSSSCHHHHHHHHHHHTCCEEEEEECS
T ss_pred c-ccCCCCeEE-EEECCCCchhhHHHHHHHHHHHhh--CC----CEEEEEeCCCCCHHHHHHHHHHCCCCEEEEEeee
Confidence 0 000000011 1111 111 12233333345555 43 3456663445567788888899999988887654
No 182
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=72.07 E-value=8.4 Score=35.97 Aligned_cols=35 Identities=0% Similarity=-0.084 Sum_probs=30.4
Q ss_pred HhhcC--CCC-CHHHHHHHHHHHHHhCCCceeeEeEEeec
Q psy2895 179 YKKVR--PGS-DYKHSLNLLKNFKKLYPNILTKSGIMVGL 215 (293)
Q Consensus 179 ~~~i~--~~~-~~e~~l~~i~~~~~~~pgi~~~~~~ivG~ 215 (293)
+..+. +.. +.++..+.++.+|++ ||.|-.++++.+
T Consensus 80 ~~~id~~p~~Gt~~dfk~Lv~~aH~~--GI~VilD~V~NH 117 (527)
T 1gcy_A 80 WHDFNKNGRYGSDAQLRQAASALGGA--GVKVLYDVVPNH 117 (527)
T ss_dssp CSSSCSCSSSCCHHHHHHHHHHHHHT--TCEEEEEECCSB
T ss_pred cccCCCCCCCCCHHHHHHHHHHHHHC--CCEEEEEEeecC
Confidence 45566 653 899999999999999 999999999988
No 183
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=72.01 E-value=23 Score=30.99 Aligned_cols=71 Identities=10% Similarity=-0.034 Sum_probs=38.9
Q ss_pred HHHHHHHCCCcEEEEeeecCCCCCC-----CChhHHHHHHHHHHhhCCCc-EEEEEcCCCcCcHHHHHHHHHHcCCCeee
Q psy2895 96 IAYTINKLKLNYVVITSVNRDDLHD-----GGSSHFVSCIKHIRKLSTKI-KIEILIPDFRNQINHVLKIFKQALPDVLN 169 (293)
Q Consensus 96 ~~~~~~~~G~~~i~l~gg~~~~l~~-----~~~~~~~~ll~~i~~~~~~~-~i~~~~~~~~~~~~e~l~~l~~aG~~~i~ 169 (293)
.++...+.|+..|.+.-.-...++. ...+++.++++.+++..|+. .++++. +.. ..++.|.+.|+|.++
T Consensus 198 ~~~~~~~aGad~iqi~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~~~~~~~ih~c~-g~~----~~l~~l~~~g~d~~~ 272 (353)
T 1j93_A 198 YIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKLTHPNLPLILYAS-GSG----GLLERLPLTGVDVVS 272 (353)
T ss_dssp HHHHHHHTTCSEEEEECGGGGGSCHHHHHHHTHHHHHHHHHHHHHHSTTCCEEEECS-SCT----TTGGGGGGGCCSEEE
T ss_pred HHHHHHHhCCCEEEEeCcccccCCHHHHHHHhHHHHHHHHHHHHHhCCCCCEEEECC-ChH----HHHHHHHhcCCCEEE
Confidence 3444456799877653211111211 12466778888888764333 344432 222 246667788999876
Q ss_pred ec
Q psy2895 170 HN 171 (293)
Q Consensus 170 ~~ 171 (293)
+.
T Consensus 273 ~d 274 (353)
T 1j93_A 273 LD 274 (353)
T ss_dssp CC
T ss_pred eC
Confidence 53
No 184
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=71.99 E-value=26 Score=29.24 Aligned_cols=77 Identities=9% Similarity=-0.001 Sum_probs=49.2
Q ss_pred HHHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEe----ec-CCC-------HH
Q psy2895 153 INHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMV----GL-GEN-------DE 220 (293)
Q Consensus 153 ~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~iv----G~-gEt-------~e 220 (293)
+++.++.++++|++.+.+.... + +..+.++.-+.-+.+++. |+.+.+.... .+ ... .+
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~----~----~~~~~~~~~~~~~~l~~~--gl~i~~~~~~~~~~~l~~~d~~~r~~~~~ 88 (294)
T 3vni_A 19 YKYYIEKVAKLGFDILEIAASP----L----PFYSDIQINELKACAHGN--GITLTVGHGPSAEQNLSSPDPDIRKNAKA 88 (294)
T ss_dssp HHHHHHHHHHHTCSEEEEESTT----G----GGCCHHHHHHHHHHHHHT--TCEEEEEECCCGGGCTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEecCcc----c----CCcCHHHHHHHHHHHHHc--CCeEEEeecCCCCcCCCCCCHHHHHHHHH
Confidence 4788899999999988876432 1 122455566666677777 8877652111 12 222 24
Q ss_pred HHHHHHHHHHhCCCCEEEe
Q psy2895 221 EILTVIHDMRNHNIDILTI 239 (293)
Q Consensus 221 d~~~~l~~l~~l~~~~i~i 239 (293)
.+.+.++.+.++|...+.+
T Consensus 89 ~~~~~i~~a~~lG~~~v~~ 107 (294)
T 3vni_A 89 FYTDLLKRLYKLDVHLIGG 107 (294)
T ss_dssp HHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHhCCCeeec
Confidence 5666778888899988764
No 185
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=71.81 E-value=28 Score=35.92 Aligned_cols=79 Identities=11% Similarity=0.110 Sum_probs=55.9
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcC---CCcCcHHHHHHHHHHcC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIP---DFRNQINHVLKIFKQAL 164 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~---~~~~~~~e~l~~l~~aG 164 (293)
.+++.+++.++.+.+.|+..|.|.--.. + .....+.++++.+++.. ++.|.+.+. |+.. .-.+..+ ++|
T Consensus 689 ~~~~~~~~~a~~~~~~Ga~~i~l~Dt~G--~--~~P~~~~~lv~~l~~~~-~~~i~~H~Hnt~G~a~--An~laA~-~aG 760 (1150)
T 3hbl_A 689 YTLEYYVKLAKELEREGFHILAIKDMAG--L--LKPKAAYELIGELKSAV-DLPIHLHTHDTSGNGL--LTYKQAI-DAG 760 (1150)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEETTC--C--CCHHHHHHHHHHHHHHC-CSCEEEEECBTTSCHH--HHHHHHH-HTT
T ss_pred CCHHHHHHHHHHHHHcCCCeeeEcCccC--C--CCHHHHHHHHHHHHHhc-CCeEEEEeCCCCcHHH--HHHHHHH-HhC
Confidence 5688899999999999999888743221 1 12568889999998875 556666542 3322 4456666 589
Q ss_pred CCeeeecccc
Q psy2895 165 PDVLNHNIET 174 (293)
Q Consensus 165 ~~~i~~~les 174 (293)
++.+...+.+
T Consensus 761 a~~vD~ai~G 770 (1150)
T 3hbl_A 761 VDIIDTAVAS 770 (1150)
T ss_dssp CSEEEEBCGG
T ss_pred CCEEEEeccc
Confidence 9999887765
No 186
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=71.80 E-value=6.1 Score=35.87 Aligned_cols=69 Identities=7% Similarity=0.032 Sum_probs=46.7
Q ss_pred HHHHHHHHHcCCCeeeec-c-cc-c-----hHHHhhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHH
Q psy2895 154 NHVLKIFKQALPDVLNHN-I-ET-V-----PRLYKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEIL 223 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~-l-es-s-----~~~~~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~ 223 (293)
.+.|+.|++.|++.|.++ + ++ + ..-|..+.+. .+.++..+.++.+|+. ||.|-.++++.+ +..-.-+.
T Consensus 26 ~~~LdyL~~LGv~~I~L~Pi~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~aH~~--Gi~VilD~V~NH~~~~~~~f~ 103 (441)
T 1lwj_A 26 KNAVSYLKELGIDFVWLMPVFSSISFHGYDVVDFYSFKAEYGSEREFKEMIEAFHDS--GIKVVLDLPIHHTGFLHTWFQ 103 (441)
T ss_dssp HHTHHHHHHTTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHT--TCEEEEEECTTBCCTTCHHHH
T ss_pred HHhhHHHHHcCCCEEEeCCCcCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHC--CCEEEEEeCCCcccCchHHHH
Confidence 455677777777777652 2 22 1 1223345554 3899999999999999 999999999998 54433343
Q ss_pred H
Q psy2895 224 T 224 (293)
Q Consensus 224 ~ 224 (293)
+
T Consensus 104 ~ 104 (441)
T 1lwj_A 104 K 104 (441)
T ss_dssp H
T ss_pred H
Confidence 3
No 187
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=71.46 E-value=50 Score=28.56 Aligned_cols=135 Identities=15% Similarity=0.186 Sum_probs=83.0
Q ss_pred hHHHHHHHHHHHCCCcEEEEeeec-CCCCCCCChhHHHHHHHHHHhhCCCcEEEE-EcC--CCcCcHHHHHHHHHHcCCC
Q psy2895 91 EEPKKIAYTINKLKLNYVVITSVN-RDDLHDGGSSHFVSCIKHIRKLSTKIKIEI-LIP--DFRNQINHVLKIFKQALPD 166 (293)
Q Consensus 91 eei~~~~~~~~~~G~~~i~l~gg~-~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~-~~~--~~~~~~~e~l~~l~~aG~~ 166 (293)
+.+.+.+++..+.|+.-|-+.+.. .|.-...+.+...++++.+++.. ++.+.+ -|. + .. .+.++.--++|.+
T Consensus 74 ~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~-~vplsI~DT~~~~-~~--~~V~eaal~aga~ 149 (310)
T 2h9a_B 74 NDPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAI-DVPLMIIGCGVEE-KD--AEIFPVIGEALSG 149 (310)
T ss_dssp TCHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHC-SSCEEEECCSCHH-HH--HHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhC-CceEEEECCCCCC-CC--HHHHHHHHHhCCC
Confidence 789999999999999999887743 23222334566677888888764 455666 331 1 12 5677776677776
Q ss_pred ---eee-eccccchHHHhhcC---------CCCCHHHHHHHHHHHHHhCCCc---eeeEeEEeec-CCCHHHHHHHHHHH
Q psy2895 167 ---VLN-HNIETVPRLYKKVR---------PGSDYKHSLNLLKNFKKLYPNI---LTKSGIMVGL-GENDEEILTVIHDM 229 (293)
Q Consensus 167 ---~i~-~~less~~~~~~i~---------~~~~~e~~l~~i~~~~~~~pgi---~~~~~~ivG~-gEt~ed~~~~l~~l 229 (293)
.++ ++.+..+++..... ...+.+...+.++.+.++ |+ .+-.|-.+|+ |-+.+.-...++.+
T Consensus 150 ~k~iINdvs~~~~~~~~~~aa~~g~~vv~m~~~dv~~l~~~~~~a~~~--Gi~~e~IilDPg~g~~g~~~e~~~~~l~~i 227 (310)
T 2h9a_B 150 RNCLLSSATKDNYKPIVATCMVHGHSVVASAPLDINLSKQLNIMIMEM--NLAPNRIIMDPLIGALGYGIEYSYSIIERM 227 (310)
T ss_dssp SCCEEEEECTTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHHTT--TCCGGGEEEECCCCCTTTTHHHHHHHHHHH
T ss_pred CCCEEEECCCCccHHHHHHHHHhCCCEEEEChhHHHHHHHHHHHHHHC--CCChhhEEEeCCCccccCchHhHHHHHHHH
Confidence 332 33322244443211 111456677777888888 88 3666767774 75555554566666
Q ss_pred Hh
Q psy2895 230 RN 231 (293)
Q Consensus 230 ~~ 231 (293)
+.
T Consensus 228 r~ 229 (310)
T 2h9a_B 228 RL 229 (310)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 188
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=71.33 E-value=55 Score=28.99 Aligned_cols=130 Identities=12% Similarity=0.090 Sum_probs=73.9
Q ss_pred HHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeecc
Q psy2895 93 PKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNI 172 (293)
Q Consensus 93 i~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~l 172 (293)
..+.++.+.+.|+..|++...... .+.+.+.++.+++.+|++.+-+-+ ..+ .+.++.+.++|+|.+.++.
T Consensus 109 ~~~~~~~lieaGvd~I~idta~G~------~~~~~~~I~~ik~~~p~v~Vi~G~--v~t--~e~A~~a~~aGAD~I~vG~ 178 (366)
T 4fo4_A 109 NEERVKALVEAGVDVLLIDSSHGH------SEGVLQRIRETRAAYPHLEIIGGN--VAT--AEGARALIEAGVSAVKVGI 178 (366)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTT------SHHHHHHHHHHHHHCTTCEEEEEE--ECS--HHHHHHHHHHTCSEEEECS
T ss_pred HHHHHHHHHhCCCCEEEEeCCCCC------CHHHHHHHHHHHHhcCCCceEeee--eCC--HHHHHHHHHcCCCEEEEec
Confidence 455667778889998887432211 246778899999887765443311 123 6678888899999998864
Q ss_pred cc-c---hHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecC-CCHHHHHHHHHHHHhCCCCEEEeecCC
Q psy2895 173 ET-V---PRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLG-ENDEEILTVIHDMRNHNIDILTIGQYL 243 (293)
Q Consensus 173 es-s---~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~g-Et~ed~~~~l~~l~~l~~~~i~i~~~~ 243 (293)
.. + -+....... -..+-+.++.+.+++. ++++ |..=| -+.+|+.+.+ .+|.+.+.+...+
T Consensus 179 gpGs~~~tr~~~g~g~-p~~~~l~~v~~~~~~~--~iPV----IA~GGI~~~~di~kal----a~GAd~V~vGs~f 243 (366)
T 4fo4_A 179 GPGSICTTRIVTGVGV-PQITAIADAAGVANEY--GIPV----IADGGIRFSGDISKAI----AAGASCVMVGSMF 243 (366)
T ss_dssp SCSTTBCHHHHHCCCC-CHHHHHHHHHHHHGGG--TCCE----EEESCCCSHHHHHHHH----HTTCSEEEESTTT
T ss_pred CCCCCCCcccccCccc-chHHHHHHHHHHHhhc--CCeE----EEeCCCCCHHHHHHHH----HcCCCEEEEChHh
Confidence 43 2 121111111 1233333333333344 5543 33112 3666765554 4799988876433
No 189
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=71.31 E-value=63 Score=29.64 Aligned_cols=129 Identities=12% Similarity=0.135 Sum_probs=75.6
Q ss_pred hHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeee
Q psy2895 91 EEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNH 170 (293)
Q Consensus 91 eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~ 170 (293)
++..+.++.+.+.|+..+.+..... . .....+.++.+++..|++.+-+ .+..+ .+.++.+.++|+|.+.+
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~G--~----~~~~~e~i~~i~~~~p~~pvi~--g~~~t--~e~a~~l~~~G~d~I~v 305 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAHG--H----SRRVIETLEMIKADYPDLPVVA--GNVAT--PEGTEALIKAGADAVKV 305 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCC--S----SHHHHHHHHHHHHHCTTSCEEE--EEECS--HHHHHHHHHTTCSEEEE
T ss_pred HhHHHHHHHHHHhCCCEEEEEecCC--c----hHHHHHHHHHHHHHCCCceEEe--CCcCC--HHHHHHHHHcCCCEEEE
Confidence 5567788888899999888754432 1 2467788999998876554433 22233 56778888999999988
Q ss_pred cccc-c---hHHHhhcCCCCCHHHHHHHHHH-HHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 171 NIET-V---PRLYKKVRPGSDYKHSLNLLKN-FKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 171 ~les-s---~~~~~~i~~~~~~e~~l~~i~~-~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
+... + ....... +...-..+..+.. +++. ++++- ..|=-.+.+|+.+.+ .+|.+.+.+.
T Consensus 306 ~~~~G~~~~~~~~~~~--g~p~~~~l~~v~~~~~~~--~ipvi---a~GGI~~~~di~kal----a~GAd~V~iG 369 (494)
T 1vrd_A 306 GVGPGSICTTRVVAGV--GVPQLTAVMECSEVARKY--DVPII---ADGGIRYSGDIVKAL----AAGAESVMVG 369 (494)
T ss_dssp CSSCSTTCHHHHHHCC--CCCHHHHHHHHHHHHHTT--TCCEE---EESCCCSHHHHHHHH----HTTCSEEEES
T ss_pred cCCCCccccccccCCC--CccHHHHHHHHHHHHhhc--CCCEE---EECCcCCHHHHHHHH----HcCCCEEEEC
Confidence 6543 2 1222222 2222222333333 3333 45431 122235777776665 3789888764
No 190
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=71.15 E-value=23 Score=30.56 Aligned_cols=82 Identities=6% Similarity=0.024 Sum_probs=53.4
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeec--CCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCc-CcHHHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVN--RDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFR-NQINHVLKIFKQ 162 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~--~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~-~~~~e~l~~l~~ 162 (293)
..++.+.+.+.++.+.+.|+..+++.|.. .+.+ +.+.-.++++.+.+....+.|-+.+.+.. .+..+..+...+
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~L---t~~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~ 100 (313)
T 3dz1_A 24 GKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKL---DAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMD 100 (313)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGS---CHHHHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhC---CHHHHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999886644 3333 35666677777766543344444332111 112445566667
Q ss_pred cCCCeeee
Q psy2895 163 ALPDVLNH 170 (293)
Q Consensus 163 aG~~~i~~ 170 (293)
+|+|.+.+
T Consensus 101 ~Gadavlv 108 (313)
T 3dz1_A 101 AGAAGVMI 108 (313)
T ss_dssp HTCSEEEE
T ss_pred cCCCEEEE
Confidence 89998765
No 191
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=70.82 E-value=8.4 Score=34.26 Aligned_cols=133 Identities=11% Similarity=0.163 Sum_probs=75.6
Q ss_pred CCCCChhHHHHHHHHH-------HHCCCcEEEEeeecC--------CCCC------CCC----hhHHHHHHHHHHhhCC-
Q psy2895 85 PDPLDIEEPKKIAYTI-------NKLKLNYVVITSVNR--------DDLH------DGG----SSHFVSCIKHIRKLST- 138 (293)
Q Consensus 85 ~~~~~~eei~~~~~~~-------~~~G~~~i~l~gg~~--------~~l~------~~~----~~~~~~ll~~i~~~~~- 138 (293)
++.++.+||.+.+++. .+.|+..|-|.++.. |... ..+ ...+.++++.+++..+
T Consensus 148 pr~mt~~eI~~ii~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~ 227 (361)
T 3gka_A 148 PRALELDEIPGVVAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSA 227 (361)
T ss_dssp CEECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCG
T ss_pred CccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCC
Confidence 4568888888776554 457999998988861 1110 011 2357789999987643
Q ss_pred -CcEEEEEcCC----Cc-----CcHHHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceee
Q psy2895 139 -KIKIEILIPD----FR-----NQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTK 208 (293)
Q Consensus 139 -~~~i~~~~~~----~~-----~~~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~ 208 (293)
.+.+++...+ +. .+..+.++.|.++|++.++++.-++ +. +.++.+++.. ++++
T Consensus 228 ~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~---------~~------~~~~~ik~~~-~iPv- 290 (361)
T 3gka_A 228 ARVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESFG---------GD------AIGQQLKAAF-GGPF- 290 (361)
T ss_dssp GGEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCS---------TT------CCHHHHHHHH-CSCE-
T ss_pred CeEEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCC---------CH------HHHHHHHHHc-CCCE-
Confidence 2566664322 11 1124577888899999998753211 10 2244555542 2222
Q ss_pred EeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 209 SGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 209 ~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
+..| |-|.++..+.+ .+=+.|.|.+.
T Consensus 291 --i~~G-git~e~a~~~l---~~G~aD~V~iG 316 (361)
T 3gka_A 291 --IVNE-NFTLDSAQAAL---DAGQADAVAWG 316 (361)
T ss_dssp --EEES-SCCHHHHHHHH---HTTSCSEEEES
T ss_pred --EEeC-CCCHHHHHHHH---HcCCccEEEEC
Confidence 1222 33666654443 44458888775
No 192
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=70.13 E-value=9 Score=34.07 Aligned_cols=87 Identities=11% Similarity=0.147 Sum_probs=55.3
Q ss_pred CCCCChhHHHHHHHHH-------HHCCCcEEEEeeecC--------CCCC------CCC----hhHHHHHHHHHHhhCC-
Q psy2895 85 PDPLDIEEPKKIAYTI-------NKLKLNYVVITSVNR--------DDLH------DGG----SSHFVSCIKHIRKLST- 138 (293)
Q Consensus 85 ~~~~~~eei~~~~~~~-------~~~G~~~i~l~gg~~--------~~l~------~~~----~~~~~~ll~~i~~~~~- 138 (293)
++.++.+||.+.+++. .+.|+..|-|.++.. |... ..+ ...+.++++.+++..+
T Consensus 140 pr~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~ 219 (362)
T 4ab4_A 140 PRALETEEINDIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGA 219 (362)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCG
T ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCC
Confidence 4568989988776554 457999998988861 1110 011 2357788999987643
Q ss_pred -CcEEEEEcCC----Cc-----CcHHHHHHHHHHcCCCeeeec
Q psy2895 139 -KIKIEILIPD----FR-----NQINHVLKIFKQALPDVLNHN 171 (293)
Q Consensus 139 -~~~i~~~~~~----~~-----~~~~e~l~~l~~aG~~~i~~~ 171 (293)
.+.+++...+ .. .+..+.++.|.++|++.++++
T Consensus 220 ~~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~ 262 (362)
T 4ab4_A 220 QRVGVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSR 262 (362)
T ss_dssp GGEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CceEEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEEC
Confidence 2566664322 11 112456788889999999875
No 193
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=70.05 E-value=25 Score=29.29 Aligned_cols=74 Identities=9% Similarity=0.066 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHHCCCcEEEEeeecCC------CCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcC
Q psy2895 91 EEPKKIAYTINKLKLNYVVITSVNRD------DLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQAL 164 (293)
Q Consensus 91 eei~~~~~~~~~~G~~~i~l~gg~~~------~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG 164 (293)
+.+.+.++++.+.|++.|.+---+.+ .+ +...+.++.+.+++.....++.+..++. .+. ..++|
T Consensus 43 ~~~~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l---~~~~~~~~a~~l~~l~~~~~~~liInd~----~~l---A~~~g 112 (243)
T 3o63_A 43 GDLAQFAEAALAGGVDIIQLRDKGSPGELRFGPL---QARDELAACEILADAAHRYGALFAVNDR----ADI---ARAAG 112 (243)
T ss_dssp CCHHHHHHHHHHTTCSEEEECCTTCHHHHHHCSC---CHHHHHHHHHHHHHHHHHTTCEEEEESC----HHH---HHHHT
T ss_pred chHHHHHHHHHHCCCCEEEEccCCCCccccccCC---CHHHHHHHHHHHHHHHHhhCCEEEEeCH----HHH---HHHhC
Confidence 34677777778889998877422100 02 1345555556555432222455544321 222 34579
Q ss_pred CCeeeecccc
Q psy2895 165 PDVLNHNIET 174 (293)
Q Consensus 165 ~~~i~~~les 174 (293)
.|.++++.+.
T Consensus 113 AdGVHLg~~d 122 (243)
T 3o63_A 113 ADVLHLGQRD 122 (243)
T ss_dssp CSEEEECTTS
T ss_pred CCEEEecCCc
Confidence 9999998643
No 194
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=70.01 E-value=40 Score=26.85 Aligned_cols=71 Identities=10% Similarity=-0.031 Sum_probs=45.3
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCC-CcEEEEEcCCCcCcHHHHHHHHHHcCCC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLST-KIKIEILIPDFRNQINHVLKIFKQALPD 166 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~-~~~i~~~~~~~~~~~~e~l~~l~~aG~~ 166 (293)
.+.+++.+.++.+.+.|++.|.+.-.++ .. .+.++.+.+.++ .+-+... ...+ .+.++...++|.+
T Consensus 16 ~d~~~~~~~~~~~~~~G~~~i~l~~~~~--------~~-~~~i~~i~~~~~~~l~vg~g--~~~~--~~~i~~a~~~Gad 82 (212)
T 2v82_A 16 ITPDEALAHVGAVIDAGFDAVEIPLNSP--------QW-EQSIPAIVDAYGDKALIGAG--TVLK--PEQVDALARMGCQ 82 (212)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEETTST--------TH-HHHHHHHHHHHTTTSEEEEE--CCCS--HHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCCh--------hH-HHHHHHHHHhCCCCeEEEec--cccC--HHHHHHHHHcCCC
Confidence 5688899999999999999888753321 11 244555554332 2223221 2233 5678888899999
Q ss_pred eeeec
Q psy2895 167 VLNHN 171 (293)
Q Consensus 167 ~i~~~ 171 (293)
.++++
T Consensus 83 ~V~~~ 87 (212)
T 2v82_A 83 LIVTP 87 (212)
T ss_dssp EEECS
T ss_pred EEEeC
Confidence 99854
No 195
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=69.90 E-value=6.6 Score=34.91 Aligned_cols=86 Identities=13% Similarity=0.268 Sum_probs=51.9
Q ss_pred HHHHHHHHcCCCeeeecc-cc--chHHHhhc-C-C----CCCHHHH----HHHHHHHHHhCC-CceeeEeEEee-c---C
Q psy2895 155 HVLKIFKQALPDVLNHNI-ET--VPRLYKKV-R-P----GSDYKHS----LNLLKNFKKLYP-NILTKSGIMVG-L---G 216 (293)
Q Consensus 155 e~l~~l~~aG~~~i~~~l-es--s~~~~~~i-~-~----~~~~e~~----l~~i~~~~~~~p-gi~~~~~~ivG-~---g 216 (293)
+..++.+++|.|.|.+.. .+ ....+.-. + | +.+++.+ +++++.++++.+ ++.+..-+=.. + |
T Consensus 162 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G 241 (363)
T 3l5l_A 162 DAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRD 241 (363)
T ss_dssp HHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCH
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCC
Confidence 345556678999987643 22 12332221 1 1 3366654 677778887753 34333222111 1 3
Q ss_pred -CCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 217 -ENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 217 -Et~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
.+.++..+.++.+.+.|++.+.+.
T Consensus 242 ~~~~~~~~~la~~L~~~Gvd~i~vs 266 (363)
T 3l5l_A 242 EQTLEESIELARRFKAGGLDLLSVS 266 (363)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 567888889999999999999886
No 196
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=69.75 E-value=34 Score=30.35 Aligned_cols=129 Identities=13% Similarity=0.129 Sum_probs=75.8
Q ss_pred hhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeee
Q psy2895 90 IEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLN 169 (293)
Q Consensus 90 ~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~ 169 (293)
.+...+.++.+.+.|++.|.+..... . ...+.+.++.+++..|+..|-.- +..+ .+.+..+.++|+|.+.
T Consensus 98 ~~~~~e~~~~a~~aGvdvI~id~a~G--~----~~~~~e~I~~ir~~~~~~~Vi~G--~V~T--~e~A~~a~~aGaD~I~ 167 (361)
T 3r2g_A 98 TENELQRAEALRDAGADFFCVDVAHA--H----AKYVGKTLKSLRQLLGSRCIMAG--NVAT--YAGADYLASCGADIIK 167 (361)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECSCC--S----SHHHHHHHHHHHHHHTTCEEEEE--EECS--HHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHHHHcCCCEEEEeCCCC--C----cHhHHHHHHHHHHhcCCCeEEEc--CcCC--HHHHHHHHHcCCCEEE
Confidence 35667788888899999777643221 1 24677889999987665544431 1223 6678888899999999
Q ss_pred ecccc-c-hHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEe-ecCCCHHHHHHHHHHHHhCCCCEEEeec
Q psy2895 170 HNIET-V-PRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMV-GLGENDEEILTVIHDMRNHNIDILTIGQ 241 (293)
Q Consensus 170 ~~les-s-~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~iv-G~gEt~ed~~~~l~~l~~l~~~~i~i~~ 241 (293)
++... + -........+.. .+..+..+.+... .+|. |=-.+.+|+...+. +|.+.+.+..
T Consensus 168 Vg~g~G~~~~tr~~~g~g~p---~l~aI~~~~~~~~------PVIAdGGI~~~~di~kALa----~GAd~V~iGr 229 (361)
T 3r2g_A 168 AGIGGGSVCSTRIKTGFGVP---MLTCIQDCSRADR------SIVADGGIKTSGDIVKALA----FGADFVMIGG 229 (361)
T ss_dssp ECCSSSSCHHHHHHHCCCCC---HHHHHHHHTTSSS------EEEEESCCCSHHHHHHHHH----TTCSEEEESG
T ss_pred EcCCCCcCccccccCCccHH---HHHHHHHHHHhCC------CEEEECCCCCHHHHHHHHH----cCCCEEEECh
Confidence 86543 2 111111111212 3455555544411 2222 32356777766554 7999888763
No 197
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=69.14 E-value=11 Score=32.31 Aligned_cols=116 Identities=13% Similarity=0.043 Sum_probs=62.3
Q ss_pred HHHHHHHHHHcCCCeeeecccc-ch-HHHhhcCCC-CCHHHHHHHHHHHHHhCCCceeeEe-EEeecC--------CCHH
Q psy2895 153 INHVLKIFKQALPDVLNHNIET-VP-RLYKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSG-IMVGLG--------ENDE 220 (293)
Q Consensus 153 ~~e~l~~l~~aG~~~i~~~les-s~-~~~~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~-~ivG~g--------Et~e 220 (293)
+++.++.++++|.+.+.+.... .. ..+ .+.+. .+.++.-+.-+.+.+. |+.+.+. .-..+. +..+
T Consensus 38 l~~~l~~aa~~G~~~VEl~~~~~~~~~~~-~~~p~~~~~~~~~~l~~~l~~~--GL~i~~~~~~~~~~~~~~~~~~~~~~ 114 (305)
T 3obe_A 38 MPNGLNRLAKAGYTDLEIFGYREDTGKFG-DYNPKNTTFIASKDYKKMVDDA--GLRISSSHLTPSLREYTKENMPKFDE 114 (305)
T ss_dssp HHHHHHHHHHHTCCEEEECCBCTTTCCBC-CC----CCCBCHHHHHHHHHHT--TCEEEEEBCCCSCCCCCGGGHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeccccccccccc-CcCcccccccCHHHHHHHHHHC--CCeEEEeeccccccccchhhHHHHHH
Confidence 4789999999999999876431 00 001 01110 1111334444566777 9976432 111111 2256
Q ss_pred HHHHHHHHHHhCCCCEEEeecCCCCCCCccccccccChhHHHHHHHHHHHhccc
Q psy2895 221 EILTVIHDMRNHNIDILTIGQYLMPSRLHLPVHRYLHPKFFEKFKKIAYKLGFK 274 (293)
Q Consensus 221 d~~~~l~~l~~l~~~~i~i~~~~~p~~~~~a~~r~~~p~~~~~~~~~~~~~G~~ 274 (293)
.+.+.++.+.++|...+.+. ..++.. .-...+ ..-+.+.++.+.+.+.|++
T Consensus 115 ~~~~~i~~A~~lG~~~v~~~-~~~~~~-~~~~~~-~~~~~l~~l~~~a~~~Gv~ 165 (305)
T 3obe_A 115 FWKKATDIHAELGVSCMVQP-SLPRIE-NEDDAK-VVSEIFNRAGEITKKAGIL 165 (305)
T ss_dssp HHHHHHHHHHHHTCSEEEEC-CCCCCS-SHHHHH-HHHHHHHHHHHHHHTTTCE
T ss_pred HHHHHHHHHHHcCCCEEEeC-CCCCCC-CHHHHH-HHHHHHHHHHHHHHHcCCE
Confidence 68888888999999998873 433211 000000 0112355666677777876
No 198
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=68.86 E-value=40 Score=32.35 Aligned_cols=111 Identities=8% Similarity=0.053 Sum_probs=74.4
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecC----CCCCC-CChhHHHHHHHHHHhhCCCcEEEEEc--CCCcCcHHHHHHH
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNR----DDLHD-GGSSHFVSCIKHIRKLSTKIKIEILI--PDFRNQINHVLKI 159 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~----~~l~~-~~~~~~~~ll~~i~~~~~~~~i~~~~--~~~~~~~~e~l~~ 159 (293)
..+.+...+.++-+++.|+..|.+-.|-. .++.. .....+.+|++..+++ ++.+-+.. .++-...++.++.
T Consensus 305 g~n~~~~k~yIDfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~k--gV~i~lw~~~~~~~~~~~~~~~~ 382 (641)
T 3a24_A 305 GVNNPTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASK--NVGIILWAGYHAFERDMENVCRH 382 (641)
T ss_dssp SSSHHHHHHHHHHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHHT--TCEEEEEEEHHHHHTSHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHhc--CCEEEEEeeCcchHHHHHHHHHH
Confidence 36899999999999999999998854421 11100 0113688999999987 45555543 3443334778999
Q ss_pred HHHcCCCeeeecc-ccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeE
Q psy2895 160 FKQALPDVLNHNI-ETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKS 209 (293)
Q Consensus 160 l~~aG~~~i~~~l-ess~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~ 209 (293)
+++-|++.+.++. +..+ ....+.+.++++.|.+. ++-++.
T Consensus 383 ~~~~Gv~gvK~Df~~~~~--------Q~~v~~y~~i~~~aA~~--~l~V~f 423 (641)
T 3a24_A 383 YAEMGVKGFKVDFMDRDD--------QEMTAFNYRAAEMCAKY--KLILDL 423 (641)
T ss_dssp HHHHTCCEEEEECCCCCS--------HHHHHHHHHHHHHHHHT--TCEEEE
T ss_pred HHHcCCCEEEECCCCCCc--------HHHHHHHHHHHHHHHHc--CCEEEc
Confidence 9999999998764 3321 11345567778888888 775543
No 199
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=68.66 E-value=41 Score=29.03 Aligned_cols=102 Identities=11% Similarity=0.119 Sum_probs=56.9
Q ss_pred hHHHHHHHHHHhhCCCcEEEEEc-C-CCc-CcHHHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHH
Q psy2895 124 SHFVSCIKHIRKLSTKIKIEILI-P-DFR-NQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKK 200 (293)
Q Consensus 124 ~~~~~ll~~i~~~~~~~~i~~~~-~-~~~-~~~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~ 200 (293)
+.+.+.++.++...|+ .+.+.. + +.. ...-+....+++.|+..+.+= -+++.+.++..+.+..+++
T Consensus 29 ~~l~~~~~~L~~~~pd-~vsVT~~~~g~~r~~t~~~a~~i~~~g~~~i~Hl----------tc~~~~~~~l~~~L~~~~~ 97 (310)
T 3apt_A 29 EALFRTLEELKAFRPA-FVSITYGAMGSTRERSVAWAQRIQSLGLNPLAHL----------TVAGQSRKEVAEVLHRFVE 97 (310)
T ss_dssp HHHHHHHHHHGGGCCS-EEEECCCSTTCSHHHHHHHHHHHHHTTCCBCEEE----------ECTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCC-EEEEecCCCCCcchhHHHHHHHHHHhCCCeEEEe----------ecCCCCHHHHHHHHHHHHH
Confidence 4456666667665554 366643 2 221 112445566666677665431 2456788888888888888
Q ss_pred hCCCceeeEeEEeec-----C---CC---HHHHHHHHHHHHhC-CCCEEEee
Q psy2895 201 LYPNILTKSGIMVGL-----G---EN---DEEILTVIHDMRNH-NIDILTIG 240 (293)
Q Consensus 201 ~~pgi~~~~~~ivG~-----g---Et---~ed~~~~l~~l~~l-~~~~i~i~ 240 (293)
. |+.= .-.+-|= | .. .++-.++++++++. | +.+.+.
T Consensus 98 ~--GI~n-iLaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~~g-~~f~ig 145 (310)
T 3apt_A 98 S--GVEN-LLALRGDPPRGERVFRPHPEGFRYAAELVALIRERYG-DRVSVG 145 (310)
T ss_dssp T--TCCE-EEEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHHHG-GGSEEE
T ss_pred C--CCCE-EEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCC-CCeEEE
Confidence 8 8831 1122221 1 11 23567777888887 6 434553
No 200
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=68.55 E-value=6.1 Score=36.22 Aligned_cols=38 Identities=8% Similarity=-0.066 Sum_probs=31.1
Q ss_pred CCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHH
Q psy2895 186 SDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTV 225 (293)
Q Consensus 186 ~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~ 225 (293)
.+.++..+.++.+|+. ||.|-.++++.+ +..-..+.+.
T Consensus 94 Gt~~df~~lv~~~h~~--Gi~VilD~V~NH~~~~~~~f~~~ 132 (475)
T 2z1k_A 94 GGNEALRHLLEVAHAH--GVRVILDGVFNHTGRGFFAFQHL 132 (475)
T ss_dssp TCHHHHHHHHHHHHHT--TCEEEEEECCSBCCTTSHHHHHH
T ss_pred CCHHHHHHHHHHHHHC--CCEEEEEEecccccCCCHHHHHH
Confidence 3789999999999999 999999999998 6544444444
No 201
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=68.45 E-value=31 Score=30.54 Aligned_cols=85 Identities=4% Similarity=-0.078 Sum_probs=49.5
Q ss_pred CChhHHHHHHHHHHHCCCcEEEE--eeecC-----CCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHH
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVI--TSVNR-----DDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIF 160 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l--~gg~~-----~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l 160 (293)
-+.+++.+.+++..+.|+..+-+ .|+-. ......+.+.+.++++..++.. +.+.+... . .+.++..
T Consensus 172 ~~~~~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g--~~v~~H~~---~--~~~i~~a 244 (426)
T 2r8c_A 172 DGVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGRG--TYVLAHAY---T--PAAIARA 244 (426)
T ss_dssp CSHHHHHHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHTT--CCEEEEEC---S--HHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHcC--CEEEEEeC---C--hHHHHHH
Confidence 35788888888888788876533 33321 1111234677888888888864 44444332 1 3344555
Q ss_pred HHcCCCeeeeccccchHHH
Q psy2895 161 KQALPDVLNHNIETVPRLY 179 (293)
Q Consensus 161 ~~aG~~~i~~~less~~~~ 179 (293)
.++|++.+.+..-.+++..
T Consensus 245 l~~G~~~i~H~~~~~~~~~ 263 (426)
T 2r8c_A 245 VRCGVRTIEHGNLIDDETA 263 (426)
T ss_dssp HHTTCSEEEECTTCCHHHH
T ss_pred HHcCCCEEecCCcCCHHHH
Confidence 5678888776543334333
No 202
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=68.29 E-value=67 Score=28.79 Aligned_cols=140 Identities=18% Similarity=0.177 Sum_probs=71.1
Q ss_pred HHHHHCCCcEEEEee-ecCCC-----C--CCCChhHHHHHHHHHHhhCCCcEEEEEcCCC-------------c--C---
Q psy2895 98 YTINKLKLNYVVITS-VNRDD-----L--HDGGSSHFVSCIKHIRKLSTKIKIEILIPDF-------------R--N--- 151 (293)
Q Consensus 98 ~~~~~~G~~~i~l~g-g~~~~-----l--~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~-------------~--~--- 151 (293)
+.+.+.|++.|.+-- .++.+ + -..+.+++..+++..++.+-.+-+.+..+++ . +
T Consensus 55 ~ilk~~G~N~VRlrvwv~p~~~~g~~y~~g~~d~~~~~~~a~~Ak~~GLkVlldfHysD~WadPg~Q~~P~aW~~~~~~~ 134 (399)
T 1ur4_A 55 KTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLADFHYSDFWADPAKQKAPKAWANLNFED 134 (399)
T ss_dssp HHHHHTTCCEEEEEECSCCBCTTCCBCSTTCCCHHHHHHHHHHHHHTTCEEEEEECSSSSCCSSSCCCCCGGGTTCCHHH
T ss_pred HHHHHCCCCEEEEeeecCCcccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEeccCCccCCcccccCccccccCCHHH
Confidence 334567888876521 22110 1 0124678888888888764222233322111 0 0
Q ss_pred -------cHHHHHHHHHHcCCC--eeeeccccchHHHhhcCCCCCHHH----HHHHHHHHHHhCCCceeeEeEEeecCCC
Q psy2895 152 -------QINHVLKIFKQALPD--VLNHNIETVPRLYKKVRPGSDYKH----SLNLLKNFKKLYPNILTKSGIMVGLGEN 218 (293)
Q Consensus 152 -------~~~e~l~~l~~aG~~--~i~~~less~~~~~~i~~~~~~e~----~l~~i~~~~~~~pgi~~~~~~ivG~gEt 218 (293)
-..+.++.|++.|.. .+.++=|.+- .+..+..++. +...++.+|+..|+..+.+++-- +..
T Consensus 135 l~~~~~~yt~~~l~~l~~~g~~~~~vqvGNEi~~----g~~~~~~~~~la~ll~ag~~aVR~v~p~~~V~ih~~~--~~~ 208 (399)
T 1ur4_A 135 KKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNG----GLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTN--PET 208 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSS----CBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEECC--TTS
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcEEEEcccccc----ccCCcccHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC--Ccc
Confidence 014667778887753 4555544421 1222234544 33445667888788766433322 333
Q ss_pred HHHHHHHHHHHHhCC--CCEEEeecCCC
Q psy2895 219 DEEILTVIHDMRNHN--IDILTIGQYLM 244 (293)
Q Consensus 219 ~ed~~~~l~~l~~l~--~~~i~i~~~~~ 244 (293)
.+.+...++.+...+ +|.|.++ |++
T Consensus 209 ~~~~~~~~d~l~~~g~d~DvIG~s-yYp 235 (399)
T 1ur4_A 209 SGRYAWIAETLHRHHVDYDVFASS-YYP 235 (399)
T ss_dssp TTHHHHHHHHHHHTTCCCSEEEEE-ECT
T ss_pred hHHHHHHHHHHHHcCCCcCeEeEe-cCc
Confidence 334444445555544 6778887 544
No 203
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=68.20 E-value=36 Score=29.54 Aligned_cols=143 Identities=13% Similarity=0.070 Sum_probs=76.8
Q ss_pred ChhHHHHHHHHHHhhCCCcEEEEEc-CCCcCc---HHHHHHHHHHcCCCeeeecccc-chHH-HhhcCCCCCHHHHHHHH
Q psy2895 122 GSSHFVSCIKHIRKLSTKIKIEILI-PDFRNQ---INHVLKIFKQALPDVLNHNIET-VPRL-YKKVRPGSDYKHSLNLL 195 (293)
Q Consensus 122 ~~~~~~~ll~~i~~~~~~~~i~~~~-~~~~~~---~~e~l~~l~~aG~~~i~~~les-s~~~-~~~i~~~~~~e~~l~~i 195 (293)
+.+...+.++.+++.+ +.+.... .|+..+ ..+.++.+++.+++.+.+..=. .+.. +... +..+.++.++.+
T Consensus 186 ~~~~~l~~i~~a~~~G--i~v~~~~i~Glget~e~~~~~l~~l~~l~~~~v~~~~f~p~~gT~l~~~-~~~~~~e~l~~i 262 (350)
T 3t7v_A 186 SFDGRVNARRFAKQQG--YCVEDGILTGVGNDIESTILSLRGMSTNDPDMVRVMTFLPQEGTPLEGF-RDKSNLSELKII 262 (350)
T ss_dssp CHHHHHHHHHHHHHHT--CEEEEEEEESSSCCHHHHHHHHHHHHHTCCSEEEEEECCCCTTSTTTTC-CCCCCCCHHHHH
T ss_pred CHHHHHHHHHHHHHcC--CeEccceEeecCCCHHHHHHHHHHHHhCCCCEEEecceeeCCCCcCccC-CCCChHHHHHHH
Confidence 4567778888888763 3443321 244222 3567788888898877653211 1111 1111 234667788888
Q ss_pred HHHHHhCCCceeeEeEE-eecCCCHHHHHHHHHHHHhCCCCEEEeecCCCCCC---Ccc-ccccccC-hhHHHHHHHHHH
Q psy2895 196 KNFKKLYPNILTKSGIM-VGLGENDEEILTVIHDMRNHNIDILTIGQYLMPSR---LHL-PVHRYLH-PKFFEKFKKIAY 269 (293)
Q Consensus 196 ~~~~~~~pgi~~~~~~i-vG~gEt~ed~~~~l~~l~~l~~~~i~i~~~~~p~~---~~~-a~~r~~~-p~~~~~~~~~~~ 269 (293)
..+|-..|+..+.+... .| .+..+..-..|.+.+.= .++|.. +.. +...+-. .-..+.+.+..+
T Consensus 263 a~~Rl~lp~~~I~a~~~~~g--------~~~~~~~l~~Gan~~~~--~~~~~~~~ag~~~~~~~~~~~~~~~~~~~~~i~ 332 (350)
T 3t7v_A 263 SVLRLMFPKRLIPASLDLEG--------IDGMVLRLNAGANIVTS--ILPPDSQLEGVANYDRDLEERDRDIKSVVRRLE 332 (350)
T ss_dssp HHHHHHSTTSBCEEEHHHHH--------HHHHHHHHHTTCCEEEE--ECCSSCCCCCSSCTTTTCSSCCCCHHHHHHHHH
T ss_pred HHHHHhCCCcCccccccccC--------hhHHHHHHhcCCceecC--CCCCCCCCCCCCCCcccchhccCCHHHHHHHHH
Confidence 88888888875554321 11 13455666788875543 234432 111 0000000 013566777777
Q ss_pred Hhcccchh
Q psy2895 270 KLGFKNVL 277 (293)
Q Consensus 270 ~~G~~~~~ 277 (293)
+.|+...+
T Consensus 333 ~~G~~~~~ 340 (350)
T 3t7v_A 333 IMGMKPAR 340 (350)
T ss_dssp HHTCEECC
T ss_pred HcCCcccc
Confidence 88887543
No 204
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=68.09 E-value=19 Score=29.57 Aligned_cols=44 Identities=14% Similarity=0.246 Sum_probs=21.6
Q ss_pred HHHHHHHHHhhCCCcEEEEEc--CC--C--cCcHHHHHHHHHHcCCCeeee
Q psy2895 126 FVSCIKHIRKLSTKIKIEILI--PD--F--RNQINHVLKIFKQALPDVLNH 170 (293)
Q Consensus 126 ~~~ll~~i~~~~~~~~i~~~~--~~--~--~~~~~e~l~~l~~aG~~~i~~ 170 (293)
+.+.++.+++.+-+ .|++.. +. . .....+..+.++++|+....+
T Consensus 21 ~~~~l~~~~~~G~~-~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~ 70 (272)
T 2q02_A 21 IEAFFRLVKRLEFN-KVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTI 70 (272)
T ss_dssp HHHHHHHHHHTTCC-EEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHcCCC-EEEeeccccccccccccCHHHHHHHHHHcCCeEEec
Confidence 45666666665322 466542 11 1 112345556666677654333
No 205
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=67.85 E-value=64 Score=28.40 Aligned_cols=145 Identities=11% Similarity=0.151 Sum_probs=82.1
Q ss_pred CChhHHHHHHHHHH---HCCCcEEEEeeecCC--CCCC--CChhHHHHHHHHHHhhCCCcEEEE-EcCCCcC-cHHHHHH
Q psy2895 88 LDIEEPKKIAYTIN---KLKLNYVVITSVNRD--DLHD--GGSSHFVSCIKHIRKLSTKIKIEI-LIPDFRN-QINHVLK 158 (293)
Q Consensus 88 ~~~eei~~~~~~~~---~~G~~~i~l~gg~~~--~l~~--~~~~~~~~ll~~i~~~~~~~~i~~-~~~~~~~-~~~e~l~ 158 (293)
.++++..+.++.+. +.|+..|.|.-+.|. .... .+.+.+.++++.+++.. +..|.+ .+|++.. ++.+.++
T Consensus 136 ~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~-~~PV~vKi~p~~d~~~~~~~a~ 214 (354)
T 4ef8_A 136 LSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVY-PHSFGVKMPPYFDFAHFDAAAE 214 (354)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHC-CSCEEEEECCCCSHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhh-CCCeEEEecCCCCHHHHHHHHH
Confidence 36888888888887 457888777655431 1111 24578899999998864 233444 3454421 1234455
Q ss_pred HHHHcC-CCeeee----------cccc-chHH-----HhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHH
Q psy2895 159 IFKQAL-PDVLNH----------NIET-VPRL-----YKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEE 221 (293)
Q Consensus 159 ~l~~aG-~~~i~~----------~les-s~~~-----~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed 221 (293)
.+.++| ++.+.+ .+++ .... +.-+....-..-.++.+..+++..+.+++ +..|=-.|.+|
T Consensus 215 ~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~~~~ipI---I~~GGI~s~~d 291 (354)
T 4ef8_A 215 ILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRRCPGKLI---FGCGGVYTGED 291 (354)
T ss_dssp HHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHHCTTSEE---EEESCCCSHHH
T ss_pred HHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHhCCCCCE---EEECCcCCHHH
Confidence 565787 888753 1111 1000 01111111124467888888887445653 22232478888
Q ss_pred HHHHHHHHHhCCCCEEEee
Q psy2895 222 ILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 222 ~~~~l~~l~~l~~~~i~i~ 240 (293)
..+.+. .|.+.+.+.
T Consensus 292 a~~~l~----aGAd~V~vg 306 (354)
T 4ef8_A 292 AFLHVL----AGASMVQVG 306 (354)
T ss_dssp HHHHHH----HTEEEEEEC
T ss_pred HHHHHH----cCCCEEEEh
Confidence 877753 688888775
No 206
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=67.76 E-value=56 Score=27.66 Aligned_cols=119 Identities=11% Similarity=0.080 Sum_probs=72.2
Q ss_pred hHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeee
Q psy2895 91 EEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNH 170 (293)
Q Consensus 91 eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~ 170 (293)
.++.+.++.+.+.|+..|.+..- +.+...+.+++ +.+++.. ++.| ..-+++.+ ...+...+.+|.|.+.+
T Consensus 79 ~dp~~~A~~y~~~GA~~IsVltd--~~~f~Gs~~~L----~~ir~~v-~lPV--l~Kdfi~d-~~qi~ea~~~GAD~VlL 148 (272)
T 3tsm_A 79 FDPPALAKAYEEGGAACLSVLTD--TPSFQGAPEFL----TAARQAC-SLPA--LRKDFLFD-PYQVYEARSWGADCILI 148 (272)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECC--STTTCCCHHHH----HHHHHTS-SSCE--EEESCCCS-THHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHCCCCEEEEecc--ccccCCCHHHH----HHHHHhc-CCCE--EECCccCC-HHHHHHHHHcCCCEEEE
Confidence 35667778888889998865432 22333334333 4555532 2222 22244333 55677788999999988
Q ss_pred ccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEeec
Q psy2895 171 NIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQ 241 (293)
Q Consensus 171 ~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~~ 241 (293)
..-. .+.++..+.++.+++. |+.+-+.+ .|.+|+ +.+.++|++.|.+++
T Consensus 149 i~a~-----------L~~~~l~~l~~~a~~l--Gl~~lvev-----h~~eEl----~~A~~~ga~iIGinn 197 (272)
T 3tsm_A 149 IMAS-----------VDDDLAKELEDTAFAL--GMDALIEV-----HDEAEM----ERALKLSSRLLGVNN 197 (272)
T ss_dssp ETTT-----------SCHHHHHHHHHHHHHT--TCEEEEEE-----CSHHHH----HHHTTSCCSEEEEEC
T ss_pred cccc-----------cCHHHHHHHHHHHHHc--CCeEEEEe-----CCHHHH----HHHHhcCCCEEEECC
Confidence 6421 1345666777888888 88543222 455654 444578999999974
No 207
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=67.60 E-value=7.9 Score=34.76 Aligned_cols=60 Identities=7% Similarity=-0.013 Sum_probs=42.7
Q ss_pred HHHHHHHHHcCCCeeeec-c-cc-c-----hHHHhhcC-CC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec
Q psy2895 154 NHVLKIFKQALPDVLNHN-I-ET-V-----PRLYKKVR-PG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL 215 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~-l-es-s-----~~~~~~i~-~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~ 215 (293)
.+.|+.|++.|++.|.++ + ++ + ..-|..+. +. .+.++..+.++.+|+. ||.|-.++++.+
T Consensus 24 ~~~ldyl~~lGv~~i~l~Pi~~~~~~~gY~~~d~~~id~~~~Gt~~d~~~lv~~~h~~--Gi~VilD~V~NH 93 (405)
T 1ht6_A 24 MGKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGK--GVQAIADIVINH 93 (405)
T ss_dssp HTTHHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHT--TCEEEEEECCSB
T ss_pred HHHHHHHHHcCCCEEEeCCCccCCCCCCCCccccccCCCccCCCHHHHHHHHHHHHHC--CCEEEEEECcCc
Confidence 345667777777777652 2 22 1 22334455 54 3899999999999999 999999999988
No 208
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=67.58 E-value=53 Score=32.00 Aligned_cols=115 Identities=10% Similarity=0.101 Sum_probs=73.5
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecC----------C---CCCC-CChhHHHHHHHHHHhhCCCcEEEEE--cCC--
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNR----------D---DLHD-GGSSHFVSCIKHIRKLSTKIKIEIL--IPD-- 148 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~----------~---~l~~-~~~~~~~~ll~~i~~~~~~~~i~~~--~~~-- 148 (293)
..+.+...+.++-+++.|+..|.+-|-+. . ++.. ..--++.+|++..+++ ++.|-+. +.+
T Consensus 367 g~nte~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sK--GV~iilw~~t~~~~ 444 (738)
T 2d73_A 367 SANTANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARK--GIKMMMHHETSASV 444 (738)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHT--TCEEEEEEECTTBH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhC--CCEEEEEEcCCCch
Confidence 37899999999999999999999832221 0 1100 0001388999999987 4555543 333
Q ss_pred --CcCcHHHHHHHHHHcCCCeeeeccccchHHHhhcCCC------CCHHHHHHHHHHHHHhCCCceeeEe
Q psy2895 149 --FRNQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPG------SDYKHSLNLLKNFKKLYPNILTKSG 210 (293)
Q Consensus 149 --~~~~~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~------~~~e~~l~~i~~~~~~~pgi~~~~~ 210 (293)
+-..+++.++.+++.|+..|.++.=+. .+.++ .....+.++++.|.++ ++-|..+
T Consensus 445 ~n~e~~~d~~f~~~~~~Gv~GVKvdF~g~-----~~~r~~~h~~Q~~v~~Y~~i~~~AA~~--~LmVnfH 507 (738)
T 2d73_A 445 RNYERHMDKAYQFMADNGYNSVKSGYVGN-----IIPRGEHHYGQWMNNHYLYAVKKAADY--KIMVNAH 507 (738)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEECCSS-----CBSTTCCTTSHHHHHHHHHHHHHHHHT--TCEEEET
T ss_pred hhHHHHHHHHHHHHHHcCCCEEEeCcccc-----CcCCcccccchHHHHHHHHHHHHHHHc--CcEEEcc
Confidence 222246788899999999998764210 11111 1356678888888888 7755543
No 209
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=67.40 E-value=20 Score=29.63 Aligned_cols=42 Identities=14% Similarity=0.116 Sum_probs=22.2
Q ss_pred HHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeee
Q psy2895 126 FVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLN 169 (293)
Q Consensus 126 ~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~ 169 (293)
+.+.++.+++.+-+ .|++..|.-. +..+..+.+++.|+....
T Consensus 25 ~~~~l~~~~~~G~~-~vEl~~~~~~-~~~~~~~~l~~~gl~~~~ 66 (269)
T 3ngf_A 25 FLERFRLAAEAGFG-GVEFLFPYDF-DADVIARELKQHNLTQVL 66 (269)
T ss_dssp HHHHHHHHHHTTCS-EEECSCCTTS-CHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCC-EEEecCCccC-CHHHHHHHHHHcCCcEEE
Confidence 55666666665322 5666554211 225555566666765543
No 210
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=67.22 E-value=42 Score=28.79 Aligned_cols=82 Identities=13% Similarity=0.108 Sum_probs=51.5
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeec--CCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcCCCcC-cHHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVN--RDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIPDFRN-QINHVLKIFK 161 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~--~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~~~~~-~~~e~l~~l~ 161 (293)
..++.+.+.+.++.+.+.|+..+++.|.. .+.+ +.+.-.++++.+.+.. ..+.+-+.+.+... +..+..+..+
T Consensus 32 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~L---s~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~ 108 (304)
T 3cpr_A 32 GDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTT---TAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAA 108 (304)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTS---CHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhC---CHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHH
Confidence 46899999999999999999998887654 3333 3455666777665542 23344333322111 1234555566
Q ss_pred HcCCCeeee
Q psy2895 162 QALPDVLNH 170 (293)
Q Consensus 162 ~aG~~~i~~ 170 (293)
++|+|.+.+
T Consensus 109 ~~Gadavlv 117 (304)
T 3cpr_A 109 SAGADGLLV 117 (304)
T ss_dssp HTTCSEEEE
T ss_pred hcCCCEEEE
Confidence 789998754
No 211
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=66.72 E-value=50 Score=27.74 Aligned_cols=105 Identities=10% Similarity=0.073 Sum_probs=62.6
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCCCCC----CCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcC
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRDDLH----DGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQAL 164 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~----~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG 164 (293)
+.+...+.++.+.+.|+.-|.++.-.+.+-+ ....+.+..+.+..++. ++.+.+. ..+ .+.++.+.+.
T Consensus 35 ~~e~a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~----Gl~~~te-~~d--~~~~~~l~~~- 106 (262)
T 1zco_A 35 SREQIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEY----GLVTVTE-VMD--TRHVELVAKY- 106 (262)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH----TCEEEEE-CCC--GGGHHHHHHH-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHc----CCcEEEe-eCC--HHhHHHHHhh-
Confidence 6899999999999999987776654432111 01134454444443333 4555441 222 3446777777
Q ss_pred CCeeeeccc-c-chHHHhhcC---------CC--CCHHHHHHHHHHHHHh
Q psy2895 165 PDVLNHNIE-T-VPRLYKKVR---------PG--SDYKHSLNLLKNFKKL 201 (293)
Q Consensus 165 ~~~i~~~le-s-s~~~~~~i~---------~~--~~~e~~l~~i~~~~~~ 201 (293)
++.+.++.- . +..+++.+. ++ .+.++++++++.++..
T Consensus 107 vd~~kIga~~~~n~~ll~~~a~~~kPV~lk~G~~~t~~e~~~Av~~i~~~ 156 (262)
T 1zco_A 107 SDILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAEYIMAQ 156 (262)
T ss_dssp CSEEEECGGGTTCHHHHHHHTTSSSCEEEECCTTCCHHHHHHHHHHHHTT
T ss_pred CCEEEECcccccCHHHHHHHHhcCCcEEEecCCCCCHHHHHHHHHHHHHC
Confidence 899998643 3 345555554 12 1567777777777766
No 212
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=66.67 E-value=64 Score=27.95 Aligned_cols=76 Identities=14% Similarity=0.104 Sum_probs=52.3
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcC-cHHHHHHHHHHcCCC
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRN-QINHVLKIFKQALPD 166 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~-~~~e~l~~l~~aG~~ 166 (293)
+++++.+.++++.+.|++.+-+-.|.. .+.-.+.++.+++.++++.+.+-.+ ++.. +..+.++.|.+.|++
T Consensus 139 ~~~~~~~~a~~~~~~Gf~~iKik~g~~-------~~~d~~~v~avr~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~i~ 211 (345)
T 2zad_A 139 TVENRVKEAKKIFEEGFRVIKIKVGEN-------LKEDIEAVEEIAKVTRGAKYIVDANMGYTQKEAVEFARAVYQKGID 211 (345)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSC-------HHHHHHHHHHHHHHSTTCEEEEECTTCSCHHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHcCcCEEEEeecCC-------HHHHHHHHHHHHhhCCCCeEEEECCCCCCHHHHHHHHHHHHhcCCC
Confidence 688899999999999999888765531 3445677888888766777776444 3321 113566777778888
Q ss_pred --eeeec
Q psy2895 167 --VLNHN 171 (293)
Q Consensus 167 --~i~~~ 171 (293)
.+.=+
T Consensus 212 ~~~iE~P 218 (345)
T 2zad_A 212 IAVYEQP 218 (345)
T ss_dssp CSEEECC
T ss_pred eeeeeCC
Confidence 76533
No 213
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=66.63 E-value=67 Score=28.17 Aligned_cols=76 Identities=7% Similarity=-0.027 Sum_probs=51.7
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcC-CCcC-cHHHHHHHHHHcC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIP-DFRN-QINHVLKIFKQAL 164 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~-~~~~-~~~e~l~~l~~aG 164 (293)
.+++++.+.++.+.+.|++.+-+-.|.. +.+.-.+.++.+++.. +++.+.+=.+ ++.. +..+.++.|.+.|
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~------~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~a~~~~~~l~~~~ 218 (371)
T 2ovl_A 145 LPVADLKTQADRFLAGGFRAIKMKVGRP------DLKEDVDRVSALREHLGDSFPLMVDANMKWTVDGAIRAARALAPFD 218 (371)
T ss_dssp SCHHHHHHHHHHHHHTTCSCEEEECCCS------SHHHHHHHHHHHHHHHCTTSCEEEECTTCSCHHHHHHHHHHHGGGC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCC------CHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhcC
Confidence 4789999999999999999887766642 1345668888888764 5666766444 3321 1135666677778
Q ss_pred CCeee
Q psy2895 165 PDVLN 169 (293)
Q Consensus 165 ~~~i~ 169 (293)
++.+.
T Consensus 219 i~~iE 223 (371)
T 2ovl_A 219 LHWIE 223 (371)
T ss_dssp CSEEE
T ss_pred CCEEE
Confidence 87764
No 214
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=66.57 E-value=44 Score=30.29 Aligned_cols=80 Identities=16% Similarity=0.163 Sum_probs=39.4
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEc-CCCcCcHHHHHHHHHHcCCCe
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILI-PDFRNQINHVLKIFKQALPDV 167 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~-~~~~~~~~e~l~~l~~aG~~~ 167 (293)
+++.+++.++.+.+.|+..|.|.--.. ...+..+.++++.+++.. +..+.+.. +++..-+.-.+..+ ++|++.
T Consensus 178 d~~~~~~v~~~~~~~Ga~~i~l~DTvG----~~~P~~v~~lv~~l~~~~-~~~i~~H~Hnd~GlAvAN~laAv-~aGa~~ 251 (423)
T 3ivs_A 178 DLVDLLSLYKAVDKIGVNRVGIADTVG----CATPRQVYDLIRTLRGVV-SCDIECHFHNDTGMAIANAYCAL-EAGATH 251 (423)
T ss_dssp CHHHHHHHHHHHHHHCCSEEEEEETTS----CCCHHHHHHHHHHHHHHC-SSEEEEEEBCTTSCHHHHHHHHH-HTTCCE
T ss_pred CHHHHHHHHHHHHHhCCCccccCCccC----cCCHHHHHHHHHHHHhhc-CCeEEEEECCCCchHHHHHHHHH-HhCCCE
Confidence 456666666666666666655532111 112345666666666553 33444433 22111113344444 367777
Q ss_pred eeecccc
Q psy2895 168 LNHNIET 174 (293)
Q Consensus 168 i~~~les 174 (293)
+...+-+
T Consensus 252 vd~ti~G 258 (423)
T 3ivs_A 252 IDTSILG 258 (423)
T ss_dssp EEEBGGG
T ss_pred EEEeccc
Confidence 6665543
No 215
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=66.56 E-value=36 Score=29.57 Aligned_cols=82 Identities=7% Similarity=-0.014 Sum_probs=63.3
Q ss_pred HHHHHHHcCCCeeeecccc-chHHHhhcCC---CCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHh
Q psy2895 156 VLKIFKQALPDVLNHNIET-VPRLYKKVRP---GSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRN 231 (293)
Q Consensus 156 ~l~~l~~aG~~~i~~~les-s~~~~~~i~~---~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~ 231 (293)
....+.++|++.+.++=-+ +-..+ -.+ ..+.++.+..++.+.+..|.+++.+|+=.|+| +.+++.+++..+.+
T Consensus 51 sA~i~e~aGfdai~vs~~~~a~~~l--G~pD~~~vt~~em~~~~~~I~r~~~~~PviaD~d~Gyg-~~~~v~~tv~~l~~ 127 (318)
T 1zlp_A 51 SAAVVEKTGFHAAFVSGYSVSAAML--GLPDFGLLTTTEVVEATRRITAAAPNLCVVVDGDTGGG-GPLNVQRFIRELIS 127 (318)
T ss_dssp HHHHHHHTTCSEEEECHHHHHHHHH--CCCSSSCSCHHHHHHHHHHHHHHSSSSEEEEECTTCSS-SHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEECcHHHhhHhc--CCCCCCCCCHHHHHHHHHHHHhhccCCCEEEeCCCCCC-CHHHHHHHHHHHHH
Confidence 4555667899998875211 11111 112 34899999999999998778999999999988 89999999999999
Q ss_pred CCCCEEEee
Q psy2895 232 HNIDILTIG 240 (293)
Q Consensus 232 l~~~~i~i~ 240 (293)
.|+.-+.|-
T Consensus 128 aGaagv~iE 136 (318)
T 1zlp_A 128 AGAKGVFLE 136 (318)
T ss_dssp TTCCEEEEE
T ss_pred cCCcEEEEC
Confidence 999988884
No 216
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=66.46 E-value=54 Score=29.16 Aligned_cols=82 Identities=13% Similarity=0.083 Sum_probs=35.5
Q ss_pred CCChhHHHHHHHHHHHC---CCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHc
Q psy2895 87 PLDIEEPKKIAYTINKL---KLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQA 163 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~---G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~a 163 (293)
..++++..+.++.+.+. |+-.+-|.|.+. .. ....+.+.++..++. ++.+++...+...-....-+.+...
T Consensus 161 ~~~~e~a~~~~~~a~~~~~~~VvG~dL~g~E~-~~---p~~~f~~~f~~ar~~--Gl~~t~HAGE~~~p~~~i~~al~~l 234 (380)
T 4gxw_A 161 EQDPDEAVAIVDWMKANRADEVAGIGIDYREN-DR---PPELFWKAYRDARAA--GFRTTAHAGEFGMPWRNVETAVDLL 234 (380)
T ss_dssp TSCHHHHHHHHHHHHHTCCTTBCEEEEESCCT-TC---CGGGGHHHHHHHHHT--TCEEEEEESCTTCCHHHHHHHHHTS
T ss_pred CCCHHHHHHHHHHHHHhCCCCEEEEeecCCCC-CC---CHHHHHHHHHHHHHc--CCCeeeeccccCCchHHHHHHHHHc
Confidence 34555555555544433 333444444432 11 134455556666554 3444443332111001122233234
Q ss_pred CCCeeeecccc
Q psy2895 164 LPDVLNHNIET 174 (293)
Q Consensus 164 G~~~i~~~les 174 (293)
|+++|.+|+..
T Consensus 235 ga~RIgHG~~~ 245 (380)
T 4gxw_A 235 HVDRVDHGYTI 245 (380)
T ss_dssp CCSEEEECGGG
T ss_pred CCcccccceee
Confidence 66666666544
No 217
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=66.20 E-value=39 Score=29.01 Aligned_cols=84 Identities=7% Similarity=0.058 Sum_probs=52.6
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcCCC-cCcHHHHHHHHHHc
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIPDF-RNQINHVLKIFKQA 163 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~~~-~~~~~e~l~~l~~a 163 (293)
..++.+.+.+.++.+.+.|+..+++.|.... ....+.+.-.++++.+.+.. ..+.+-+.+.+. ..+..+..+...++
T Consensus 31 g~iD~~~l~~lv~~li~~Gv~gi~v~GttGE-~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~ 109 (304)
T 3l21_A 31 GSLDTATAARLANHLVDQGCDGLVVSGTTGE-SPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAE 109 (304)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEEESSTTTT-GGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccc-hhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHc
Confidence 4689999999999999999999888765431 11223556667777665542 234444433211 11124555666778
Q ss_pred CCCeeee
Q psy2895 164 LPDVLNH 170 (293)
Q Consensus 164 G~~~i~~ 170 (293)
|+|.+.+
T Consensus 110 Gadavlv 116 (304)
T 3l21_A 110 GAHGLLV 116 (304)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9998765
No 218
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=65.70 E-value=17 Score=29.94 Aligned_cols=72 Identities=10% Similarity=0.113 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHCCCcEEEEeeecCCCC-CCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcCcHHHHHHHHH-HcCCCe
Q psy2895 91 EEPKKIAYTINKLKLNYVVITSVNRDDL-HDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRNQINHVLKIFK-QALPDV 167 (293)
Q Consensus 91 eei~~~~~~~~~~G~~~i~l~gg~~~~l-~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~~~~e~l~~l~-~aG~~~ 167 (293)
.+..+.++.+.++|++.|.-+||. +.. -..+.+.+.++++.. .+ ++.++.. |... +-+..+. +.|++.
T Consensus 133 ~d~~~ale~L~~lGv~rILTSG~~-~~~~a~~g~~~L~~Lv~~a---~~--ri~Im~GgGV~~---~Ni~~l~~~tGv~e 203 (224)
T 2bdq_A 133 SDQKKSIDQLVALGFTRILLHGSS-NGEPIIENIKHIKALVEYA---NN--RIEIMVGGGVTA---ENYQYICQETGVKQ 203 (224)
T ss_dssp TTHHHHHHHHHHTTCCEEEECSCS-SCCCGGGGHHHHHHHHHHH---TT--SSEEEECSSCCT---TTHHHHHHHHTCCE
T ss_pred cCHHHHHHHHHHcCCCEEECCCCC-CCCcHHHHHHHHHHHHHhh---CC--CeEEEeCCCCCH---HHHHHHHHhhCCCE
Confidence 334555677888999998744444 321 112345555555432 11 4666653 5443 2334443 579999
Q ss_pred eeec
Q psy2895 168 LNHN 171 (293)
Q Consensus 168 i~~~ 171 (293)
++.+
T Consensus 204 ~H~s 207 (224)
T 2bdq_A 204 AHGT 207 (224)
T ss_dssp EEET
T ss_pred Eccc
Confidence 9974
No 219
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=65.49 E-value=15 Score=31.77 Aligned_cols=64 Identities=11% Similarity=0.093 Sum_probs=44.2
Q ss_pred HHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeec
Q psy2895 96 IAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHN 171 (293)
Q Consensus 96 ~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~ 171 (293)
+++++.+.|+..|.+..+ +.+.+.++++.++..+|++.|.+. .|+ + .+.+..+.++|+|.+.++
T Consensus 209 e~~~A~~aGaD~I~ld~~--------~~~~l~~~v~~l~~~~~~~~I~AS-GGI-t--~~ni~~~~~aGaD~i~vG 272 (299)
T 2jbm_A 209 EAVQAAEAGADLVLLDNF--------KPEELHPTATVLKAQFPSVAVEAS-GGI-T--LDNLPQFCGPHIDVISMG 272 (299)
T ss_dssp HHHHHHHTTCSEEEEESC--------CHHHHHHHHHHHHHHCTTSEEEEE-SSC-C--TTTHHHHCCTTCCEEECT
T ss_pred HHHHHHHcCCCEEEECCC--------CHHHHHHHHHHhhccCCCeeEEEE-CCC-C--HHHHHHHHHCCCCEEEEC
Confidence 344555678888876432 246788888877776676666653 344 3 567888899999998875
No 220
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=65.47 E-value=33 Score=30.06 Aligned_cols=78 Identities=13% Similarity=0.053 Sum_probs=50.3
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecC-CC--CCCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcCcHHHHHHHHHHc
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNR-DD--LHDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRNQINHVLKIFKQA 163 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~-~~--l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~~~~e~l~~l~~a 163 (293)
.+.++..+.++.+.+.|+..|.++.|.. +. .+. ......+.++.+++.. .+-+... ++.+ .+.++.+-+.
T Consensus 236 ~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~-~~~~~~~~~~~ir~~~---~iPVi~~Ggi~t--~e~a~~~l~~ 309 (349)
T 3hgj_A 236 WSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPL-APGFQVPFADAVRKRV---GLRTGAVGLITT--PEQAETLLQA 309 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCC-CTTTTHHHHHHHHHHH---CCEEEECSSCCC--HHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCC-CccccHHHHHHHHHHc---CceEEEECCCCC--HHHHHHHHHC
Confidence 5788999999999999999999885421 11 110 1123346677777753 3444444 4444 5666666677
Q ss_pred C-CCeeeec
Q psy2895 164 L-PDVLNHN 171 (293)
Q Consensus 164 G-~~~i~~~ 171 (293)
| +|.+.++
T Consensus 310 G~aD~V~iG 318 (349)
T 3hgj_A 310 GSADLVLLG 318 (349)
T ss_dssp TSCSEEEES
T ss_pred CCceEEEec
Confidence 7 8998876
No 221
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=65.20 E-value=29 Score=28.51 Aligned_cols=97 Identities=9% Similarity=0.000 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEc-CCCcCcHHHHHHHHHHcCCCeeee
Q psy2895 92 EPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILI-PDFRNQINHVLKIFKQALPDVLNH 170 (293)
Q Consensus 92 ei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~-~~~~~~~~e~l~~l~~aG~~~i~~ 170 (293)
...+.++.+.+.|+..+++++...+ ....+.+ .++++.+++.. + +-+.. .|..+ .+.+..+.++|++.+.+
T Consensus 153 ~~~e~~~~~~~~G~~~i~~~~~~~~-g~~~g~~--~~~i~~l~~~~-~--ipvia~GGI~~--~~d~~~~~~~Gadgv~v 224 (252)
T 1ka9_F 153 HAVEWAVKGVELGAGEILLTSMDRD-GTKEGYD--LRLTRMVAEAV-G--VPVIASGGAGR--MEHFLEAFQAGAEAALA 224 (252)
T ss_dssp EHHHHHHHHHHHTCCEEEEEETTTT-TTCSCCC--HHHHHHHHHHC-S--SCEEEESCCCS--HHHHHHHHHTTCSEEEE
T ss_pred cHHHHHHHHHHcCCCEEEEecccCC-CCcCCCC--HHHHHHHHHHc-C--CCEEEeCCCCC--HHHHHHHHHCCCHHHHH
Confidence 3455666677789999988864432 1111111 35666666643 2 23333 35555 67778888899999887
Q ss_pred ccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceee
Q psy2895 171 NIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTK 208 (293)
Q Consensus 171 ~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~ 208 (293)
+ ..++ ....++++..+ .+.+. |+.+.
T Consensus 225 g----sal~---~~~~~~~~~~~---~l~~~--~~~~~ 250 (252)
T 1ka9_F 225 A----SVFH---FGEIPIPKLKR---YLAEK--GVHVR 250 (252)
T ss_dssp S----HHHH---TTSSCHHHHHH---HHHHT--TCCBC
T ss_pred H----HHHH---cCCCCHHHHHH---HHHHC--CCCcC
Confidence 6 2232 22336655544 45666 77654
No 222
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=65.16 E-value=79 Score=28.49 Aligned_cols=146 Identities=12% Similarity=0.089 Sum_probs=79.5
Q ss_pred CCCCChhHHHHHHHHH-------HHCCCcEEEEeeecC--------CCCC------CCCh-----hHHHHHHHHHHhhC-
Q psy2895 85 PDPLDIEEPKKIAYTI-------NKLKLNYVVITSVNR--------DDLH------DGGS-----SHFVSCIKHIRKLS- 137 (293)
Q Consensus 85 ~~~~~~eei~~~~~~~-------~~~G~~~i~l~gg~~--------~~l~------~~~~-----~~~~~ll~~i~~~~- 137 (293)
++.++.+||.+.+++. .+.|+..|-|.+++. |... ..+. .-+.++++.+++..
T Consensus 157 pr~mt~~eI~~ii~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~ 236 (419)
T 3l5a_A 157 VIAMSHEKINSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVID 236 (419)
T ss_dssp EEECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHh
Confidence 3579999988876554 457999999988861 1110 1112 45778888888753
Q ss_pred ----CCc--EEEEEcCCC--------cCcHHHHHHHHHH-cCCCeeeeccccc-hHHHhhcCCCCCHHHHHHHHHHHHHh
Q psy2895 138 ----TKI--KIEILIPDF--------RNQINHVLKIFKQ-ALPDVLNHNIETV-PRLYKKVRPGSDYKHSLNLLKNFKKL 201 (293)
Q Consensus 138 ----~~~--~i~~~~~~~--------~~~~~e~l~~l~~-aG~~~i~~~less-~~~~~~i~~~~~~e~~l~~i~~~~~~ 201 (293)
+++ .+++...++ .++..+.++.|.+ +|+|.++++.-+. ...+.....+..+ ..+.++.+++.
T Consensus 237 ~~~~~~f~v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~--~~~~a~~Ik~~ 314 (419)
T 3l5a_A 237 KEAPDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHF--GRPVNQIVYEH 314 (419)
T ss_dssp HHCCTTCEEEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTT--TSBHHHHHHHH
T ss_pred hhcCCCeeEEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccc--cHHHHHHHHHH
Confidence 333 455532111 1122567888888 9999999864221 1111111111111 11334455554
Q ss_pred CC-CceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 202 YP-NILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 202 ~p-gi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
.+ .+++ +.+|--.|.++..+.++ + .|.|.+.
T Consensus 315 v~~~iPV---I~~GgI~t~e~Ae~~L~---~--aDlVaiG 346 (419)
T 3l5a_A 315 LAGRIPL---IASGGINSPESALDALQ---H--ADMVGMS 346 (419)
T ss_dssp HTTSSCE---EECSSCCSHHHHHHHGG---G--CSEEEES
T ss_pred cCCCCeE---EEECCCCCHHHHHHHHH---h--CCcHHHH
Confidence 33 2433 23343367777766554 3 8888775
No 223
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=65.04 E-value=15 Score=31.16 Aligned_cols=64 Identities=6% Similarity=-0.028 Sum_probs=43.6
Q ss_pred HHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeec
Q psy2895 96 IAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHN 171 (293)
Q Consensus 96 ~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~ 171 (293)
+++++.+.|+..|.+... +.+.+.++++.++..+|++.+.+. .|+ + .+.+..+.++|+|.+.++
T Consensus 194 e~~~A~~aGaD~I~ld~~--------~~~~l~~~v~~l~~~~~~~~i~As-GGI-~--~~ni~~~~~aGaD~i~vG 257 (273)
T 2b7n_A 194 EAKNAMNAGADIVMCDNL--------SVLETKEIAAYRDAHYPFVLLEAS-GNI-S--LESINAYAKSGVDAISVG 257 (273)
T ss_dssp HHHHHHHHTCSEEEEETC--------CHHHHHHHHHHHHHHCTTCEEEEE-SSC-C--TTTHHHHHTTTCSEEECT
T ss_pred HHHHHHHcCCCEEEECCC--------CHHHHHHHHHHhhccCCCcEEEEE-CCC-C--HHHHHHHHHcCCcEEEEc
Confidence 344445568888876422 246788888877776676666553 344 3 567888889999998875
No 224
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=64.79 E-value=32 Score=29.28 Aligned_cols=82 Identities=5% Similarity=0.024 Sum_probs=50.7
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcC-cHHHHHHHHHHcC
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRN-QINHVLKIFKQAL 164 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~-~~~e~l~~l~~aG 164 (293)
..++.+.+.+.++.+.+.|+..+++.|.... .+..+.+.-.++++.+.+...+ +-+.+.+... +..+..+...++|
T Consensus 15 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE-~~~Ls~eEr~~v~~~~~~~~~g--ViaGvg~~~t~~ai~la~~A~~~G 91 (288)
T 2nuw_A 15 GKVNVDALKTHAKNLLEKGIDAIFVNGTTGL-GPALSKDEKRQNLNALYDVTHK--LIFQVGSLNLNDVMELVKFSNEMD 91 (288)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEETSTTTT-GGGSCHHHHHHHHHHHTTTCSC--EEEECCCSCHHHHHHHHHHHHTSC
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccC-hhhCCHHHHHHHHHHHHHHhCC--eEEeeCCCCHHHHHHHHHHHHhcC
Confidence 4688899999999999999998887665421 1122356677888877766444 3232221111 1134455556678
Q ss_pred CCeeee
Q psy2895 165 PDVLNH 170 (293)
Q Consensus 165 ~~~i~~ 170 (293)
+|.+.+
T Consensus 92 adavlv 97 (288)
T 2nuw_A 92 ILGVSS 97 (288)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 888765
No 225
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=64.59 E-value=73 Score=27.90 Aligned_cols=143 Identities=16% Similarity=0.108 Sum_probs=81.9
Q ss_pred CChhHHHHHHHHHHHCCCc-EEEEeeecC--CCCC--CCChhHHHHHHHHHHhhCCCcEEEE-EcCCCcCcHHHHHHHHH
Q psy2895 88 LDIEEPKKIAYTINKLKLN-YVVITSVNR--DDLH--DGGSSHFVSCIKHIRKLSTKIKIEI-LIPDFRNQINHVLKIFK 161 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~-~i~l~gg~~--~~l~--~~~~~~~~~ll~~i~~~~~~~~i~~-~~~~~~~~~~e~l~~l~ 161 (293)
-++++..+.++.+.+.|+. .|.|.-+.| +... ..+.+.+.++++.+++.. +..|.+ .+|++ + ..+..+.+.
T Consensus 138 ~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~-~~PV~vKi~p~~-~-~~~~a~~~~ 214 (345)
T 3oix_A 138 MSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYF-TKPLGIKLPPYF-D-IVHFDQAAA 214 (345)
T ss_dssp SSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTC-CSCEEEEECCCC-C-HHHHHHHHH
T ss_pred CCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHh-CCCeEEEECCCC-C-HHHHHHHHH
Confidence 4689999999998888876 776665532 1111 124577899999998763 233333 24553 2 255666666
Q ss_pred HcCCCeeee-----------cccc-chHH-----HhhcCCCCCHHHHHHHHHHHHHhCC-CceeeEeEEeecCCCHHHHH
Q psy2895 162 QALPDVLNH-----------NIET-VPRL-----YKKVRPGSDYKHSLNLLKNFKKLYP-NILTKSGIMVGLGENDEEIL 223 (293)
Q Consensus 162 ~aG~~~i~~-----------~les-s~~~-----~~~i~~~~~~e~~l~~i~~~~~~~p-gi~~~~~~ivG~gEt~ed~~ 223 (293)
++|.+.+.+ .+++ ...+ +.-+.....+...++.+..+++..+ .+++ +..|=-.|.+|..
T Consensus 215 ~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipI---Ig~GGI~s~~da~ 291 (345)
T 3oix_A 215 IFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQI---IGTGGVXTGRDAF 291 (345)
T ss_dssp HHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEE---EEESSCCSHHHHH
T ss_pred HhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcE---EEECCCCChHHHH
Confidence 666655431 1111 0100 0001111123445788888888754 3543 2233357888887
Q ss_pred HHHHHHHhCCCCEEEee
Q psy2895 224 TVIHDMRNHNIDILTIG 240 (293)
Q Consensus 224 ~~l~~l~~l~~~~i~i~ 240 (293)
+.+. .|.+.+.+.
T Consensus 292 ~~l~----aGAd~V~ig 304 (345)
T 3oix_A 292 EHIL----CGASMVQIG 304 (345)
T ss_dssp HHHH----HTCSEEEES
T ss_pred HHHH----hCCCEEEEC
Confidence 7764 589988885
No 226
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=64.20 E-value=70 Score=28.01 Aligned_cols=71 Identities=13% Similarity=0.049 Sum_probs=39.6
Q ss_pred HHHHHHHCCCcEEEEeeecCCCCCC-----CChhHHHHHHHHHH-hhCC----CcEEEEEcCCCcCcHHHHHHHHHHcCC
Q psy2895 96 IAYTINKLKLNYVVITSVNRDDLHD-----GGSSHFVSCIKHIR-KLST----KIKIEILIPDFRNQINHVLKIFKQALP 165 (293)
Q Consensus 96 ~~~~~~~~G~~~i~l~gg~~~~l~~-----~~~~~~~~ll~~i~-~~~~----~~~i~~~~~~~~~~~~e~l~~l~~aG~ 165 (293)
.++...+.|+.-|.+.-.....++. ...+++..+++.++ +..| +..+-++.-+. ...++.+.+.|+
T Consensus 202 ~~~~~i~aGad~i~i~D~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~G~----~~~l~~l~~~g~ 277 (367)
T 1r3s_A 202 YLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDG----HFALEELAQAGY 277 (367)
T ss_dssp HHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEEEEETTC----GGGHHHHTTSSC
T ss_pred HHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeEEEcCCc----HHHHHHHHhcCC
Confidence 3444456799877653221111221 12467788888888 6522 23333333232 236788889999
Q ss_pred Ceeee
Q psy2895 166 DVLNH 170 (293)
Q Consensus 166 ~~i~~ 170 (293)
|.+++
T Consensus 278 d~i~~ 282 (367)
T 1r3s_A 278 EVVGL 282 (367)
T ss_dssp SEEEC
T ss_pred CEEEe
Confidence 98765
No 227
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=64.14 E-value=12 Score=31.35 Aligned_cols=78 Identities=3% Similarity=-0.010 Sum_probs=36.5
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCC---c-C-------cHHHH
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDF---R-N-------QINHV 156 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~---~-~-------~~~e~ 156 (293)
++.++.+ +.+.+.|++.|-+.+...+.+...+...+.++-+.+++. ++.+...++.+ . . .+.+.
T Consensus 15 ~~~~~~l---~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (286)
T 3dx5_A 15 ISFTDIV---QFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDK--TLEITMISDYLDISLSADFEKTIEKCEQL 89 (286)
T ss_dssp CCHHHHH---HHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGG--TCCEEEEECCCCCSTTSCHHHHHHHHHHH
T ss_pred CCHHHHH---HHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHc--CCeEEEEecCCCCCCchhHHHHHHHHHHH
Confidence 4555555 445567888887654311101001123344444444444 34444333211 1 1 12445
Q ss_pred HHHHHHcCCCeeee
Q psy2895 157 LKIFKQALPDVLNH 170 (293)
Q Consensus 157 l~~l~~aG~~~i~~ 170 (293)
++..++.|+..+.+
T Consensus 90 i~~A~~lG~~~v~~ 103 (286)
T 3dx5_A 90 AILANWFKTNKIRT 103 (286)
T ss_dssp HHHHHHHTCCEEEE
T ss_pred HHHHHHhCCCEEEE
Confidence 66666678888754
No 228
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=64.09 E-value=33 Score=29.25 Aligned_cols=82 Identities=11% Similarity=0.041 Sum_probs=50.5
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcC-cHHHHHHHHHHcC
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRN-QINHVLKIFKQAL 164 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~-~~~e~l~~l~~aG 164 (293)
..++.+.+.+.++.+.+.|+..+++.|.... .+..+.+.-.++++.+.+...+ +-+.+.+... +..+..+..+++|
T Consensus 15 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE-~~~Ls~eEr~~v~~~~~~~~~g--viaGvg~~~t~~ai~la~~A~~~G 91 (293)
T 1w3i_A 15 NRIDKEKLKIHAENLIRKGIDKLFVNGTTGL-GPSLSPEEKLENLKAVYDVTNK--IIFQVGGLNLDDAIRLAKLSKDFD 91 (293)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESSTTTT-GGGSCHHHHHHHHHHHHTTCSC--EEEECCCSCHHHHHHHHHHGGGSC
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccC-hhhCCHHHHHHHHHHHHHHcCC--EEEecCCCCHHHHHHHHHHHHhcC
Confidence 4688899999999999999998887665421 1122356677888887776444 3232321111 1133444455578
Q ss_pred CCeeee
Q psy2895 165 PDVLNH 170 (293)
Q Consensus 165 ~~~i~~ 170 (293)
+|.+.+
T Consensus 92 adavlv 97 (293)
T 1w3i_A 92 IVGIAS 97 (293)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 888754
No 229
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=64.04 E-value=6.5 Score=36.26 Aligned_cols=42 Identities=17% Similarity=-0.016 Sum_probs=32.4
Q ss_pred cCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHH
Q psy2895 182 VRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTV 225 (293)
Q Consensus 182 i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~ 225 (293)
+.+. .+.++..+.++.+|+. ||.|-.++++.+ +..-.-+.+.
T Consensus 95 idp~~Gt~~df~~Lv~~aH~~--Gi~VilD~V~NH~s~~~~~f~~~ 138 (488)
T 2wc7_A 95 VDPMLGGNEAFKELLDAAHQR--NIKVVLDGVFNHSSRGFFFFHDV 138 (488)
T ss_dssp ECGGGTHHHHHHHHHHHHHHT--TCEEEEEECCSBCCSSSHHHHHH
T ss_pred cCcccCCHHHHHHHHHHHHHC--CCEEEEEeCCCcCCCcCHHHHHH
Confidence 4443 3789999999999999 999999999998 6544444444
No 230
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=63.91 E-value=21 Score=30.58 Aligned_cols=66 Identities=6% Similarity=0.043 Sum_probs=43.9
Q ss_pred HHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeecc
Q psy2895 95 KIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNI 172 (293)
Q Consensus 95 ~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~l 172 (293)
++++++.+.|+..|.+- + + +.+.+.+.++.++..++++.+.+. .|+. .+.+..+.+.|+|.+.+|-
T Consensus 205 eea~eal~aGaD~I~LD---n--~---~~~~~~~~v~~l~~~~~~v~ieaS-GGIt---~~~i~~~a~tGVD~isvG~ 270 (284)
T 1qpo_A 205 EQLDAVLPEKPELILLD---N--F---AVWQTQTAVQRRDSRAPTVMLESS-GGLS---LQTAATYAETGVDYLAVGA 270 (284)
T ss_dssp HHHHHHGGGCCSEEEEE---T--C---CHHHHHHHHHHHHHHCTTCEEEEE-SSCC---TTTHHHHHHTTCSEEECGG
T ss_pred HHHHHHHHcCCCEEEEC---C--C---CHHHHHHHHHHhhccCCCeEEEEE-CCCC---HHHHHHHHhcCCCEEEECH
Confidence 55566666788866652 1 2 246788888888875555444443 2433 5678888999999998763
No 231
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=63.71 E-value=10 Score=35.88 Aligned_cols=71 Identities=14% Similarity=0.109 Sum_probs=51.1
Q ss_pred HHHHHHHHHcCCCeeeec-c-cc-c-----hHHHhhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHH
Q psy2895 154 NHVLKIFKQALPDVLNHN-I-ET-V-----PRLYKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEIL 223 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~-l-es-s-----~~~~~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~ 223 (293)
.+.|+.|++.|++.|.+. + ++ + ..-|..+.+. .+.++..+.++.+|+. ||.|-.++++.+ +..-..+.
T Consensus 176 ~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~--Gi~VilD~V~NH~~~~~~~f~ 253 (585)
T 1wzl_A 176 IDRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRR--GIKIILDAVFNHAGDQFFAFR 253 (585)
T ss_dssp HHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTT--TCEEEEEECCSBCCTTSHHHH
T ss_pred HHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHC--CCEEEEEEcCCcCCCccHHHH
Confidence 456888999999998763 2 32 1 1223345554 3889999999999999 999999999999 65544454
Q ss_pred HHH
Q psy2895 224 TVI 226 (293)
Q Consensus 224 ~~l 226 (293)
+.+
T Consensus 254 ~~~ 256 (585)
T 1wzl_A 254 DVL 256 (585)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 232
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=63.68 E-value=46 Score=27.61 Aligned_cols=19 Identities=11% Similarity=-0.060 Sum_probs=11.8
Q ss_pred HHHHHHHHHcCCCeeeecc
Q psy2895 154 NHVLKIFKQALPDVLNHNI 172 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~l 172 (293)
++.++.++++|++.+.+..
T Consensus 41 ~~~l~~~~~~G~~~vEl~~ 59 (287)
T 3kws_A 41 NEKLDFMEKLGVVGFEPGG 59 (287)
T ss_dssp HHHHHHHHHTTCCEEECBS
T ss_pred HHHHHHHHHcCCCEEEecC
Confidence 5666666666666665543
No 233
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=63.65 E-value=11 Score=35.64 Aligned_cols=71 Identities=14% Similarity=0.050 Sum_probs=50.6
Q ss_pred HHHHHHHHHcCCCeeeec-c-cc-c-----hHHHhhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHH
Q psy2895 154 NHVLKIFKQALPDVLNHN-I-ET-V-----PRLYKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEIL 223 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~-l-es-s-----~~~~~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~ 223 (293)
.+.|+.|++.|++.|.+. + ++ + ..-|-.+.+. .+.++..+.++.+|+. ||.|-.++++.+ +..-..+.
T Consensus 179 ~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~--Gi~VilD~V~NH~~~~~~~f~ 256 (588)
T 1j0h_A 179 IDHLDYLVDLGITGIYLTPIFRSPSNHKYDTADYFEVDPHFGDKETLKTLIDRCHEK--GIRVMLDAVFNHCGYEFAPFQ 256 (588)
T ss_dssp HHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHHT--TCEEEEEECCSBCCTTCHHHH
T ss_pred HHHHHHHHHcCCCEEEECCcccCCCCCCcCccccCccCccCCCHHHHHHHHHHHHHC--CCEEEEEECcCcCcccchhHH
Confidence 456788888999998763 2 22 1 1222345554 3789999999999999 999999999998 65544454
Q ss_pred HHH
Q psy2895 224 TVI 226 (293)
Q Consensus 224 ~~l 226 (293)
+.+
T Consensus 257 ~~~ 259 (588)
T 1j0h_A 257 DVW 259 (588)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 234
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=63.46 E-value=52 Score=29.05 Aligned_cols=70 Identities=10% Similarity=0.012 Sum_probs=37.1
Q ss_pred HHHHHHCCCcEEEEeeecCCCCCCC-----ChhHHHHHHHHHHhhCCC--cEEEEEcCCCcCcHHHHHHHHHHcCCCeee
Q psy2895 97 AYTINKLKLNYVVITSVNRDDLHDG-----GSSHFVSCIKHIRKLSTK--IKIEILIPDFRNQINHVLKIFKQALPDVLN 169 (293)
Q Consensus 97 ~~~~~~~G~~~i~l~gg~~~~l~~~-----~~~~~~~ll~~i~~~~~~--~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~ 169 (293)
++...+.|+.-|.+.-.....++.. ..+++.++++.+++..|+ +.+-.+..+. ...++.+++.|++.++
T Consensus 203 ~~~qi~aGad~i~ifDs~~~~Lsp~~f~ef~~Py~k~i~~~l~~~~~g~~~pvi~f~~g~----~~~l~~l~~~g~d~i~ 278 (368)
T 4exq_A 203 LNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQLKREHDGARVPAIAFTKGG----GLWLEDLAATGVDAVG 278 (368)
T ss_dssp HHHHHHHTCSEEEEEETTGGGSCTTHHHHHTHHHHHHHHHTSCCEETTEECCEEEEETTC----GGGHHHHHTSSCSEEE
T ss_pred HHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCcEEEEcCCc----HHHHHHHHHhCCCEEe
Confidence 3333466998876532211122221 235566677777654331 3333333232 2357778889999876
Q ss_pred e
Q psy2895 170 H 170 (293)
Q Consensus 170 ~ 170 (293)
+
T Consensus 279 ~ 279 (368)
T 4exq_A 279 L 279 (368)
T ss_dssp C
T ss_pred e
Confidence 5
No 235
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=63.31 E-value=44 Score=28.08 Aligned_cols=61 Identities=2% Similarity=0.031 Sum_probs=36.5
Q ss_pred HCCCcEEEEeeecCCCCCC--CChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeec
Q psy2895 102 KLKLNYVVITSVNRDDLHD--GGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHN 171 (293)
Q Consensus 102 ~~G~~~i~l~gg~~~~l~~--~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~ 171 (293)
+.|.+ +.|.++.++.+ .+.+...+ +....|.-.+.+.-+|+.+ .+.+..++++|++.+-+|
T Consensus 171 ~~~a~---iIGINNRnL~tf~vdl~~t~~----L~~~ip~~~~~VsESGI~t--~~dv~~l~~~G~~a~LVG 233 (258)
T 4a29_A 171 RIGAR---FIGIMSRDFETGEINKENQRK----LISMIPSNVVKVAKLGISE--RNEIEELRKLGVNAFLIS 233 (258)
T ss_dssp HTTCS---EEEECSBCTTTCCBCHHHHHH----HHTTSCTTSEEEEEESSCC--HHHHHHHHHTTCCEEEEC
T ss_pred cCCCc---EEEEeCCCccccccCHHHHHH----HHhhCCCCCEEEEcCCCCC--HHHHHHHHHCCCCEEEEC
Confidence 44555 33656545532 22333333 3344443334454457766 888999999999999987
No 236
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=63.04 E-value=55 Score=28.17 Aligned_cols=82 Identities=12% Similarity=0.164 Sum_probs=46.6
Q ss_pred ChhHHHHHHHHHHhhCCCcEEEEEc-CCC----cCcHHHHHHHHHHcCCCeeeecccc-chHH-HhhcCCCCCHHHHHHH
Q psy2895 122 GSSHFVSCIKHIRKLSTKIKIEILI-PDF----RNQINHVLKIFKQALPDVLNHNIET-VPRL-YKKVRPGSDYKHSLNL 194 (293)
Q Consensus 122 ~~~~~~~ll~~i~~~~~~~~i~~~~-~~~----~~~~~e~l~~l~~aG~~~i~~~les-s~~~-~~~i~~~~~~e~~l~~ 194 (293)
+.+...+.++.+++.+ +.+.... .++ ..++.+.++.+++.|++.+.+..=. .+.. +.. .+..+.++.++.
T Consensus 176 ~~~~~~~~i~~~~~~G--i~v~~~~i~G~p~et~e~~~~~~~~l~~l~~~~i~i~~~~p~~gt~l~~-~~~~~~~e~~~~ 252 (348)
T 3iix_A 176 SFENRLNCLLTLKELG--YETGAGSMVGLPGQTIDDLVDDLLFLKEHDFDMVGIGPFIPHPDTPLAN-EKKGDFTLTLKM 252 (348)
T ss_dssp CHHHHHHHHHHHHHTT--CEEEECBEESCTTCCHHHHHHHHHHHHHHTCSEECCEECCCCTTSTTTT-SCCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHhC--CeeccceEEeCCCCCHHHHHHHHHHHHhcCCCEEeeeeeecCCCCCccc-CCCCCHHHHHHH
Confidence 4566777777777753 3443321 133 1223556777777888876553211 1111 111 234578888898
Q ss_pred HHHHHHhCCCce
Q psy2895 195 LKNFKKLYPNIL 206 (293)
Q Consensus 195 i~~~~~~~pgi~ 206 (293)
+..++-..|+..
T Consensus 253 ~a~~R~~lp~~~ 264 (348)
T 3iix_A 253 VALTRILLPDSN 264 (348)
T ss_dssp HHHHHHHSTTSB
T ss_pred HHHHHHHCCCCC
Confidence 888888877753
No 237
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=62.84 E-value=68 Score=28.42 Aligned_cols=76 Identities=8% Similarity=0.052 Sum_probs=51.6
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhh-CCCcEEEEEcC-CCcC-cHHHHHHHHHHcC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKL-STKIKIEILIP-DFRN-QINHVLKIFKQAL 164 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~-~~~~~i~~~~~-~~~~-~~~e~l~~l~~aG 164 (293)
.++++..+.++.+.+.|++.+-+-.|.. +.+.-.+.++.+++. .+++.+.+=.+ ++.. +..+.++.|.+.|
T Consensus 161 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~------~~~~~~e~v~avR~avg~d~~l~vDan~~~~~~~a~~~~~~l~~~~ 234 (393)
T 2og9_A 161 TPIDQLMVNASASIERGIGGIKLKVGQP------DGALDIARVTAVRKHLGDAVPLMVDANQQWDRPTAQRMCRIFEPFN 234 (393)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEECCCS------CHHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCC------CHHHHHHHHHHHHHHcCCCCEEEEECCCCCCHHHHHHHHHHHHhhC
Confidence 4789999999999999999887765542 135667888888886 46666766444 3321 1134566677778
Q ss_pred CCeee
Q psy2895 165 PDVLN 169 (293)
Q Consensus 165 ~~~i~ 169 (293)
++.+.
T Consensus 235 i~~iE 239 (393)
T 2og9_A 235 LVWIE 239 (393)
T ss_dssp CSCEE
T ss_pred CCEEE
Confidence 87765
No 238
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=62.77 E-value=22 Score=34.08 Aligned_cols=86 Identities=13% Similarity=0.190 Sum_probs=51.2
Q ss_pred HHHHHHHHcCCCeeeecc-cc--chHHHhhc-C-C----CCCHHH----HHHHHHHHHHhCC-CceeeE----eEEeecC
Q psy2895 155 HVLKIFKQALPDVLNHNI-ET--VPRLYKKV-R-P----GSDYKH----SLNLLKNFKKLYP-NILTKS----GIMVGLG 216 (293)
Q Consensus 155 e~l~~l~~aG~~~i~~~l-es--s~~~~~~i-~-~----~~~~e~----~l~~i~~~~~~~p-gi~~~~----~~ivG~g 216 (293)
+..++.+++|.|.+.+.. .+ .+..+.-. + | +.+++. .+++++.++++.+ ++.+.. .-.+.-|
T Consensus 145 ~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g 224 (671)
T 1ps9_A 145 RCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDG 224 (671)
T ss_dssp HHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTC
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCC
Confidence 445566778999987643 21 12222211 1 1 234554 4777777777642 333221 1111116
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 217 ENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 217 Et~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
.+.++..+.++.+.+.|++.+.++
T Consensus 225 ~~~~~~~~~a~~l~~~g~d~i~v~ 248 (671)
T 1ps9_A 225 GTFAETVELAQAIEAAGATIINTG 248 (671)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEcC
Confidence 788999999999999999999875
No 239
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=62.76 E-value=55 Score=25.81 Aligned_cols=113 Identities=14% Similarity=0.067 Sum_probs=68.9
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCC-CcEEEEEcCCCcCcHHHHHHHHHHcCC
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLST-KIKIEILIPDFRNQINHVLKIFKQALP 165 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~-~~~i~~~~~~~~~~~~e~l~~l~~aG~ 165 (293)
..+.++..+.++.+.+.|+..+.++...+ ...+.++.+++..| +..+.+.+ ..+ .+.++...++|.
T Consensus 18 ~~~~~~~~~~~~~~~~~G~~~iev~~~~~---------~~~~~i~~ir~~~~~~~~ig~~~--v~~--~~~~~~a~~~Ga 84 (205)
T 1wa3_A 18 ANSVEEAKEKALAVFEGGVHLIEITFTVP---------DADTVIKELSFLKEKGAIIGAGT--VTS--VEQCRKAVESGA 84 (205)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEEEETTST---------THHHHHHHTHHHHHTTCEEEEES--CCS--HHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEEeCCCh---------hHHHHHHHHHHHCCCCcEEEecc--cCC--HHHHHHHHHcCC
Confidence 46789999999999999999887654321 23456777776643 44444422 122 556777778999
Q ss_pred CeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 166 DVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 166 ~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
|.+ ++.- .+ -+.++.+++. |+.+- .|. .|.+++ ....++|++.+.++
T Consensus 85 d~i-v~~~------------~~----~~~~~~~~~~--g~~vi----~g~-~t~~e~----~~a~~~Gad~vk~~ 131 (205)
T 1wa3_A 85 EFI-VSPH------------LD----EEISQFCKEK--GVFYM----PGV-MTPTEL----VKAMKLGHTILKLF 131 (205)
T ss_dssp SEE-ECSS------------CC----HHHHHHHHHH--TCEEE----CEE-CSHHHH----HHHHHTTCCEEEET
T ss_pred CEE-EcCC------------CC----HHHHHHHHHc--CCcEE----CCc-CCHHHH----HHHHHcCCCEEEEc
Confidence 998 4321 11 1355566777 77653 343 245543 33456788777654
No 240
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=62.69 E-value=16 Score=32.08 Aligned_cols=57 Identities=11% Similarity=0.130 Sum_probs=41.4
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCC--C----C-hhHHHHHHHHHHhhCCCcEEE
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHD--G----G-SSHFVSCIKHIRKLSTKIKIE 143 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~--~----~-~~~~~~ll~~i~~~~~~~~i~ 143 (293)
.++.+.+.++++++.++|++.|.|.|.-++...+ . + ---+...++.||+.+|++.|-
T Consensus 69 r~sid~l~~~~~~~~~lGi~av~LFgv~~p~~KD~~gs~A~~~~g~v~rAir~iK~~~P~l~Vi 132 (356)
T 3obk_A 69 RLSMEDLLKEVGEARSYGIKAFMLFPKVDDELKSVMAEESYNPDGLLPRAIMALKEAFPDVLLL 132 (356)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEEEEECCGGGCBSSCGGGGCTTSHHHHHHHHHHHHSTTCEEE
T ss_pred EECHHHHHHHHHHHHHCCCCEEEEecCCCcccCCcccccccCCCChHHHHHHHHHHHCCCCEEE
Confidence 3789999999999999999999888873221211 0 1 123667889999999986443
No 241
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=62.68 E-value=42 Score=29.14 Aligned_cols=78 Identities=17% Similarity=0.212 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEe--------------ec-CCCH
Q psy2895 155 HVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMV--------------GL-GEND 219 (293)
Q Consensus 155 e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~iv--------------G~-gEt~ 219 (293)
+.++.|++.|++.+.+.+...+. ....+.+.+++.++.++++ |+.+-.++-+ +. +.+.
T Consensus 31 ~~~~ilk~~G~n~vRlri~v~P~-----~g~~d~~~~~~~~~~ak~~--Gl~v~ld~hysd~wadP~~q~~p~~W~~~~~ 103 (334)
T 1fob_A 31 ALETILADAGINSIRQRVWVNPS-----DGSYDLDYNLELAKRVKAA--GMSLYLDLHLSDTWADPSDQTTPSGWSTTDL 103 (334)
T ss_dssp CHHHHHHHHTCCEEEEEECSCCT-----TCTTCHHHHHHHHHHHHHT--TCEEEEEECCSSSCCBTTBCBCCTTSCSSCH
T ss_pred hHHHHHHHcCCCEEEEEEEECCC-----CCccCHHHHHHHHHHHHHC--CCEEEEEeccCCCCCCcccccCccccccCCh
Q ss_pred HHHH--------HHHHHHHh--CCCCEEEe
Q psy2895 220 EEIL--------TVIHDMRN--HNIDILTI 239 (293)
Q Consensus 220 ed~~--------~~l~~l~~--l~~~~i~i 239 (293)
+++. +.+..+++ ..++.+.+
T Consensus 104 ~~~~~~~~~yt~~v~~~l~~~g~~v~~v~v 133 (334)
T 1fob_A 104 GTLKWQLYNYTLEVCNTFAENDIDIEIISI 133 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCEEEE
No 242
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=62.50 E-value=15 Score=33.35 Aligned_cols=33 Identities=9% Similarity=0.182 Sum_probs=28.8
Q ss_pred hcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec
Q psy2895 181 KVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL 215 (293)
Q Consensus 181 ~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~ 215 (293)
.+.+. .+.++..+.++.+|+. ||.|-.++++.+
T Consensus 78 ~id~~~Gt~~df~~lv~~~H~~--Gi~VilD~V~NH 111 (435)
T 1mxg_A 78 TVETRFGSKEELVRLIQTAHAY--GIKVIADVVINH 111 (435)
T ss_dssp BSSCSSCCHHHHHHHHHHHHHT--TCEEEEEECCSB
T ss_pred cCCCCCCCHHHHHHHHHHHHHC--CCEEEEEECccc
Confidence 35543 4899999999999999 999999999988
No 243
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=62.49 E-value=82 Score=27.74 Aligned_cols=77 Identities=6% Similarity=-0.022 Sum_probs=52.8
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcC-cHHHHHHHHHHcCC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRN-QINHVLKIFKQALP 165 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~-~~~e~l~~l~~aG~ 165 (293)
.++++..+.++.+.+.|++.+-+-.|. +.+...++++.+++..+++.+.+=.+ ++.. +..+.++.|.+.|+
T Consensus 146 ~~~e~~~~~a~~~~~~Gf~~iKik~g~-------~~~~~~e~v~avr~a~gd~~l~vD~n~~~~~~~a~~~~~~l~~~~i 218 (384)
T 2pgw_A 146 ETAEELARDAAVGHAQGERVFYLKVGR-------GEKLDLEITAAVRGEIGDARLRLDANEGWSVHDAINMCRKLEKYDI 218 (384)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEECCS-------CHHHHHHHHHHHHTTSTTCEEEEECTTCCCHHHHHHHHHHHGGGCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECcCC-------CHHHHHHHHHHHHHHcCCcEEEEecCCCCCHHHHHHHHHHHHhcCC
Confidence 468889999999999999988776553 13556788999998765566666334 3321 11346677777888
Q ss_pred Ceeeec
Q psy2895 166 DVLNHN 171 (293)
Q Consensus 166 ~~i~~~ 171 (293)
+.+.-+
T Consensus 219 ~~iEqP 224 (384)
T 2pgw_A 219 EFIEQP 224 (384)
T ss_dssp SEEECC
T ss_pred CEEeCC
Confidence 877533
No 244
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=62.43 E-value=82 Score=27.72 Aligned_cols=77 Identities=8% Similarity=0.105 Sum_probs=51.1
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhh-CCCcEEEEEcC-CCc-C-cHHHHHHHHHHcC
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKL-STKIKIEILIP-DFR-N-QINHVLKIFKQAL 164 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~-~~~~~i~~~~~-~~~-~-~~~e~l~~l~~aG 164 (293)
+++++.+.++.+.+.|++.+-+-.|.. ..+.+.-.+.++.+++. ++++.+.+=.+ ++. . +..+.++.|.+.|
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~----g~~~~~d~~~v~avR~a~g~~~~l~vDan~~~~d~~~A~~~~~~l~~~~ 221 (374)
T 3sjn_A 146 KPEDNVAIVQGLKDQGFSSIKFGGGVM----GDDPDTDYAIVKAVREAAGPEMEVQIDLASKWHTCGHSAMMAKRLEEFN 221 (374)
T ss_dssp SGGGGHHHHHHHHTTTCSEEEEECTTT----TSCHHHHHHHHHHHHHHHCSSSEEEEECTTTTCSHHHHHHHHHHSGGGC
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCC----CCCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCHHHHHHHHHHhhhcC
Confidence 358999999999999999988766532 11245667888889886 56777776444 333 2 1123456666677
Q ss_pred CCeee
Q psy2895 165 PDVLN 169 (293)
Q Consensus 165 ~~~i~ 169 (293)
+..+.
T Consensus 222 i~~iE 226 (374)
T 3sjn_A 222 LNWIE 226 (374)
T ss_dssp CSEEE
T ss_pred ceEEE
Confidence 77765
No 245
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=62.35 E-value=45 Score=29.69 Aligned_cols=81 Identities=10% Similarity=0.131 Sum_probs=46.0
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEc-CCCcCcHHHHHHHHHHcCC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILI-PDFRNQINHVLKIFKQALP 165 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~-~~~~~~~~e~l~~l~~aG~ 165 (293)
.+++.+.+.++.+.+. +..|.|.--.. ...+..+.++++.+++.. +++.|.+.+ +++.--+.-.+..+ ++|+
T Consensus 142 ~~~~~~~~~~~~~~~~-a~~i~l~DT~G----~~~P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAvAN~laAv-~aGa 215 (382)
T 2ztj_A 142 SEEQDLLAVYEAVAPY-VDRVGLADTVG----VATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIANAYEAI-EAGA 215 (382)
T ss_dssp SCHHHHHHHHHHHGGG-CSEEEEEETTS----CCCHHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHHHHHHHHH-HTTC
T ss_pred CCHHHHHHHHHHHHHh-cCEEEecCCCC----CCCHHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHH-HhCC
Confidence 4567777777777777 77766632111 112456777777777652 455566544 22211114455555 4788
Q ss_pred Ceeeecccc
Q psy2895 166 DVLNHNIET 174 (293)
Q Consensus 166 ~~i~~~les 174 (293)
+.+...+.+
T Consensus 216 ~~vd~tv~G 224 (382)
T 2ztj_A 216 THVDTTILG 224 (382)
T ss_dssp CEEEEBGGG
T ss_pred CEEEEcccc
Confidence 887765543
No 246
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=62.29 E-value=15 Score=33.45 Aligned_cols=57 Identities=4% Similarity=0.033 Sum_probs=40.0
Q ss_pred HHHHHHcCCCeeeec-c-cc-ch----HHH----hhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec
Q psy2895 157 LKIFKQALPDVLNHN-I-ET-VP----RLY----KKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL 215 (293)
Q Consensus 157 l~~l~~aG~~~i~~~-l-es-s~----~~~----~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~ 215 (293)
++.|++.|++.|.++ + ++ +. .-| -.+.+. .+.++..+.++.||+. ||.|-.++++.+
T Consensus 21 ldyL~~LGv~~I~l~Pi~~~~~~~~~~~gY~~~~y~idp~~Gt~~dfk~Lv~~aH~~--Gi~VilD~V~NH 89 (448)
T 1g94_A 21 EQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSYELQSRGGNRAQFIDMVNRCSAA--GVDIYVDTLINH 89 (448)
T ss_dssp HHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCSCSCBTTBCHHHHHHHHHHHHHT--TCEEEEEEECSE
T ss_pred HHHHHHcCCCEEEECCccccCCCCCCcccccccccccCCCCCCHHHHHHHHHHHHHC--CCEEEEEEeecc
Confidence 466677777776652 2 22 11 011 135554 3899999999999999 999999999988
No 247
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=62.25 E-value=27 Score=29.69 Aligned_cols=108 Identities=12% Similarity=-0.028 Sum_probs=61.7
Q ss_pred HHHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-----------------
Q psy2895 153 INHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL----------------- 215 (293)
Q Consensus 153 ~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~----------------- 215 (293)
+++.++.++++|.+.+.+.... +. ... +.+.+++ -+.+.+. |+.+.+.- .+.
T Consensus 31 ~~~~l~~~a~~G~~~VEl~~~~-~~---~~~-~~~~~~~---~~~l~~~--GL~v~~~~-~~~~~~~~~~p~~~~~~~~~ 99 (303)
T 3l23_A 31 VAANLRKVKDMGYSKLELAGYG-KG---AIG-GVPMMDF---KKMAEDA--GLKIISSH-VNPVDTSISDPFKAMIFKYS 99 (303)
T ss_dssp HHHHHHHHHHTTCCEEEECCEE-TT---EET-TEEHHHH---HHHHHHT--TCEEEEEE-CCCBCTTCSSTTTTBCCSCC
T ss_pred HHHHHHHHHHcCCCEEEecccc-Cc---ccC-CCCHHHH---HHHHHHc--CCeEEEEe-cccccccccCcccccccccc
Confidence 5789999999999999876421 11 011 2233333 3455667 99764321 121
Q ss_pred ----CCCHHHHHHHHHHHHhCCCCEEEeecCCCCCCCccccccccChhHHHHHHHHHHHhccc
Q psy2895 216 ----GENDEEILTVIHDMRNHNIDILTIGQYLMPSRLHLPVHRYLHPKFFEKFKKIAYKLGFK 274 (293)
Q Consensus 216 ----gEt~ed~~~~l~~l~~l~~~~i~i~~~~~p~~~~~a~~r~~~p~~~~~~~~~~~~~G~~ 274 (293)
.+..+.+.+.++.++++|...+.+. ..++.. .-...+ ..-+.+.++.+.+.+.|++
T Consensus 100 ~~~~~~~~~~~~~~i~~A~~lG~~~v~~~-~~~~~~-~~~~~~-~~~~~l~~l~~~a~~~Gv~ 159 (303)
T 3l23_A 100 KEVTPKIMEYWKATAADHAKLGCKYLIQP-MMPTIT-THDEAK-LVCDIFNQASDVIKAEGIA 159 (303)
T ss_dssp TTTHHHHHHHHHHHHHHHHHTTCSEEEEC-SCCCCC-SHHHHH-HHHHHHHHHHHHHHHTTCT
T ss_pred hhhHHHHHHHHHHHHHHHHHcCCCEEEEC-CCCCCC-CHHHHH-HHHHHHHHHHHHHHHCCCc
Confidence 0124567888888999999998874 432211 000000 0112355667777777887
No 248
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=62.14 E-value=51 Score=28.22 Aligned_cols=84 Identities=10% Similarity=0.032 Sum_probs=51.9
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcCCCcC-cHHHHHHHHHHc
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIPDFRN-QINHVLKIFKQA 163 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~~~~~-~~~e~l~~l~~a 163 (293)
..++.+.+.+.++.+.+.|+..+++.|.... .+..+.+.-.++++.+.+.. ..+.|-+.+.+... +..+..+...++
T Consensus 27 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE-~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~ 105 (303)
T 2wkj_A 27 QALDKASLRRLVQFNIQQGIDGLYVGGSTGE-AFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRY 105 (303)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESSTTTT-GGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECeeccC-hhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhC
Confidence 4689999999999999999999988765431 11223456667777665542 23444443322111 123455556678
Q ss_pred CCCeeee
Q psy2895 164 LPDVLNH 170 (293)
Q Consensus 164 G~~~i~~ 170 (293)
|+|.+.+
T Consensus 106 Gadavlv 112 (303)
T 2wkj_A 106 GFDAVSA 112 (303)
T ss_dssp TCSEEEE
T ss_pred CCCEEEe
Confidence 9998765
No 249
>4hjf_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, EAL domain, signaling protein; HET: MSE C2E; 1.75A {Caulobacter crescentus}
Probab=62.09 E-value=46 Score=28.95 Aligned_cols=37 Identities=22% Similarity=0.126 Sum_probs=25.4
Q ss_pred HHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 194 LLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 194 ~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
.+..+++. |+.+.+ -| -||.++ ++.++++|++.+.=+
T Consensus 274 ii~la~~l--g~~vvA---EG-VEt~~q----~~~L~~lG~d~~QGy 310 (340)
T 4hjf_A 274 VVKLGQDL--DLEVVA---EG-VENAEM----AHALQSLGCDYGQGF 310 (340)
T ss_dssp HHHHHHHH--TCEEEE---EC-CCSHHH----HHHHHHTTCCEEEST
T ss_pred HHHHHHHc--CCEEEE---Ee-CCcHHH----HHHHHHcCCCEeecC
Confidence 45667888 886532 23 477666 477799999987654
No 250
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=62.01 E-value=9.2 Score=36.69 Aligned_cols=71 Identities=11% Similarity=0.042 Sum_probs=51.2
Q ss_pred HHHHHHHHHcCCCeeeec-c-cc-ch-----HHHhhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHH
Q psy2895 154 NHVLKIFKQALPDVLNHN-I-ET-VP-----RLYKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEIL 223 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~-l-es-s~-----~~~~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~ 223 (293)
.+.|..|++.|++.|.+. + ++ +. .-|..+.+. .+.++..+.++.||+. ||.|-.++++.+ +..-.-+.
T Consensus 242 ~~kLdYLk~LGvt~I~L~Pif~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~--GI~VIlD~V~NHts~~h~wf~ 319 (645)
T 4aef_A 242 KEKIDHLVNLGINAIYLTPIFSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRF--DIKVILDGVFHHTSFFHPYFQ 319 (645)
T ss_dssp HHTHHHHHHHTCCEEEECCCEEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHT--TCEEEEEECCSBCCTTSHHHH
T ss_pred HHhhHHHHHcCCCEEEECCCCCCCCCCCcCccCCCccCcccCCHHHHHHHHHHhhhc--CCEEEEEecccccccCCchhh
Confidence 567888999999998763 2 22 11 123345543 3899999999999999 999999999998 65545555
Q ss_pred HHH
Q psy2895 224 TVI 226 (293)
Q Consensus 224 ~~l 226 (293)
+.+
T Consensus 320 ~~~ 322 (645)
T 4aef_A 320 DVV 322 (645)
T ss_dssp HHH
T ss_pred hHh
Confidence 444
No 251
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=61.96 E-value=26 Score=28.94 Aligned_cols=17 Identities=6% Similarity=-0.039 Sum_probs=8.4
Q ss_pred HHHHHHHHHcCCCeeee
Q psy2895 154 NHVLKIFKQALPDVLNH 170 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~ 170 (293)
++.++.++++|.+.+.+
T Consensus 19 ~~~l~~~~~~G~~~vEl 35 (281)
T 3u0h_A 19 VLYLDLARETGYRYVDV 35 (281)
T ss_dssp HHHHHHHHHTTCSEECC
T ss_pred HHHHHHHHHcCCCEEEe
Confidence 44555555555554444
No 252
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=61.95 E-value=8 Score=35.16 Aligned_cols=60 Identities=17% Similarity=0.116 Sum_probs=42.7
Q ss_pred HHHHHHHHHcCCCeeeec-c-cc-chH------------HHhhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec
Q psy2895 154 NHVLKIFKQALPDVLNHN-I-ET-VPR------------LYKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL 215 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~-l-es-s~~------------~~~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~ 215 (293)
.+.|+.|++.|++.|.++ + ++ +.. -|..+.+. .+.+++.+.++.+++. |+.+-.++++.+
T Consensus 33 ~~~l~yl~~lG~~~i~l~Pi~~~~~~~~~~~~~~gY~~~dy~~i~~~~Gt~~~~~~lv~~~h~~--Gi~vi~D~V~NH 108 (449)
T 3dhu_A 33 TADLQRIKDLGTDILWLLPINPIGEVNRKGTLGSPYAIKDYRGINPEYGTLADFKALTDRAHEL--GMKVMLDIVYNH 108 (449)
T ss_dssp HTTHHHHHHHTCSEEEECCCSCBCSTTCCTTTCCTTSBSCTTSCCGGGCCHHHHHHHHHHHHHT--TCEEEEEECCSE
T ss_pred HHhHHHHHHcCCCEEEECCcccccccCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHC--CCEEEEEEccCc
Confidence 456777888888887763 2 22 111 12234432 3789999999999999 999999999877
No 253
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=61.92 E-value=49 Score=28.22 Aligned_cols=84 Identities=7% Similarity=-0.038 Sum_probs=51.8
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcCCC-cCcHHHHHHHHHHc
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIPDF-RNQINHVLKIFKQA 163 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~~~-~~~~~e~l~~l~~a 163 (293)
..++.+.+.+.++.+.+.|+..+++.|.... .+..+.+.-.++++.+.+.. ..+.+-+.+.+. ..+..+..+...++
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE-~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~ 101 (297)
T 3flu_A 23 GSIHYEQLRDLIDWHIENGTDGIVAVGTTGE-SATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKA 101 (297)
T ss_dssp SCBCHHHHHHHHHHHHHTTCCEEEESSTTTT-GGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccC-cccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHc
Confidence 4689999999999999999999888665431 11223456666777665542 233343333211 11124455666778
Q ss_pred CCCeeee
Q psy2895 164 LPDVLNH 170 (293)
Q Consensus 164 G~~~i~~ 170 (293)
|+|.+.+
T Consensus 102 Gadavlv 108 (297)
T 3flu_A 102 GADYTLS 108 (297)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9998764
No 254
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=61.80 E-value=32 Score=29.43 Aligned_cols=142 Identities=10% Similarity=0.084 Sum_probs=81.1
Q ss_pred CcccCCCCCCCCChhHHHHHHHHHHHCCCcEEEE--eeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcCcH
Q psy2895 77 FCNISHGRPDPLDIEEPKKIAYTINKLKLNYVVI--TSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRNQI 153 (293)
Q Consensus 77 fC~~~~~~~~~~~~eei~~~~~~~~~~G~~~i~l--~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~~~ 153 (293)
-..||.+. .+.+.-..+++++.+.|+.+|-+ .-|. +...+.+.+.+-++.+++...+..+++... +.+++
T Consensus 115 VigFP~G~---~~~~~Kv~Ea~~Ai~~GAdEIDmVINig~---lk~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~Lt~- 187 (288)
T 3oa3_A 115 VIGFHEGT---YSTDQKVSEAKRAMQNGASELDMVMNYPW---LSEKRYTDVFQDIRAVRLAAKDAILKVILETSQLTA- 187 (288)
T ss_dssp EESTTTSC---SCHHHHHHHHHHHHHTTCSEEEEECCHHH---HHTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCH-
T ss_pred EeCCCCCC---CcHHHHHHHHHHHHHcCCCEEEEEeehhh---hcCCcHHHHHHHHHHHHHHhcCCCceEEEECCCCCH-
Confidence 34565543 34566788889999999998743 3222 222346778888888887754445777653 55552
Q ss_pred HH---HHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhC-CCceeeEeEEeecCCCHHHHHHHHHHH
Q psy2895 154 NH---VLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLY-PNILTKSGIMVGLGENDEEILTVIHDM 229 (293)
Q Consensus 154 ~e---~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~-pgi~~~~~~ivG~gEt~ed~~~~l~~l 229 (293)
++ ..+.-.++|.|.+.-+- +. -..+-+.+++ +.++...+.. +.+.+. .-|=--|.++..+.++
T Consensus 188 eei~~A~~ia~eaGADfVKTST-Gf------~~~GAT~edv-~lmr~~v~~~g~~v~VK---AAGGIrt~edAl~mi~-- 254 (288)
T 3oa3_A 188 DEIIAGCVLSSLAGADYVKTST-GF------NGPGASIENV-SLMSAVCDSLQSETRVK---ASGGIRTIEDCVKMVR-- 254 (288)
T ss_dssp HHHHHHHHHHHHTTCSEEECCC-SS------SSCCCCHHHH-HHHHHHHHHSSSCCEEE---EESSCCSHHHHHHHHH--
T ss_pred HHHHHHHHHHHHcCCCEEEcCC-CC------CCCCCCHHHH-HHHHHHHHHhCCCceEE---EeCCCCCHHHHHHHHH--
Confidence 22 23344568999886440 11 0134577764 5555554321 123322 1232356666655544
Q ss_pred HhCCCCEEEee
Q psy2895 230 RNHNIDILTIG 240 (293)
Q Consensus 230 ~~l~~~~i~i~ 240 (293)
.|.+.+..+
T Consensus 255 --aGA~RiGtS 263 (288)
T 3oa3_A 255 --AGAERLGAS 263 (288)
T ss_dssp --TTCSEEEES
T ss_pred --cCCceeehh
Confidence 899988775
No 255
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=61.79 E-value=55 Score=26.25 Aligned_cols=97 Identities=11% Similarity=0.177 Sum_probs=54.7
Q ss_pred CChhHHHHHHH-HHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEc-C-CCcCc-----HHHHHHH
Q psy2895 88 LDIEEPKKIAY-TINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILI-P-DFRNQ-----INHVLKI 159 (293)
Q Consensus 88 ~~~eei~~~~~-~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~-~-~~~~~-----~~e~l~~ 159 (293)
-..++.++.+. .+.+.|++.|++.+-.. +.-..+++.+ .++.+-+.+ . ||... .+|..+.
T Consensus 26 eNT~~tl~la~era~e~~Ik~iVVAS~sG--------~TA~k~~e~~----~~i~lVvVTh~~GF~~pg~~e~~~e~~~~ 93 (201)
T 1vp8_A 26 ENTEETLRLAVERAKELGIKHLVVASSYG--------DTAMKALEMA----EGLEVVVVTYHTGFVREGENTMPPEVEEE 93 (201)
T ss_dssp GGHHHHHHHHHHHHHHHTCCEEEEECSSS--------HHHHHHHHHC----TTCEEEEEECCTTSSSTTCCSSCHHHHHH
T ss_pred ccHHHHHHHHHHHHHHcCCCEEEEEeCCC--------hHHHHHHHHh----cCCeEEEEeCcCCCCCCCCCcCCHHHHHH
Confidence 44666666654 44567999999876543 1222333333 245555544 1 33210 1889999
Q ss_pred HHHcCCCeeee--ccccc-hHHHhhcCCCCCHHHHHHHHH
Q psy2895 160 FKQALPDVLNH--NIETV-PRLYKKVRPGSDYKHSLNLLK 196 (293)
Q Consensus 160 l~~aG~~~i~~--~less-~~~~~~i~~~~~~e~~l~~i~ 196 (293)
|.+.|+..+.. .+-+. ..+.++...-+..+-+-++++
T Consensus 94 L~~~G~~V~t~tH~lsgveR~is~kfGG~~p~eiiA~tLR 133 (201)
T 1vp8_A 94 LRKRGAKIVRQSHILSGLERSISRKLGGVSRTEAIAEALR 133 (201)
T ss_dssp HHHTTCEEEECCCTTTTTHHHHHHHTCCCCHHHHHHHHHH
T ss_pred HHhCCCEEEEEeccccchhHHHHHhcCCCCHHHHHHHHHH
Confidence 99999988764 33333 345555553334444445555
No 256
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=61.64 E-value=23 Score=31.33 Aligned_cols=78 Identities=15% Similarity=0.175 Sum_probs=50.0
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCC-C--CCCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcCcHHHHHHHHHHc
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRD-D--LHDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRNQINHVLKIFKQA 163 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~-~--l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~~~~e~l~~l~~a 163 (293)
.+.++..+.++.+.+.|+..|.+++|... . .+. ...+..++++.+++.. .+-+... ++.+ .+.++.+-+.
T Consensus 243 ~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~-~~~~~~~~~~~ir~~~---~iPVi~~GgI~s--~e~a~~~l~~ 316 (363)
T 3l5l_A 243 QTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPW-GPAFMGPIAERVRREA---KLPVTSAWGFGT--PQLAEAALQA 316 (363)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCC-CTTTTHHHHHHHHHHH---TCCEEECSSTTS--HHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCccccccccCC-CcchhHHHHHHHHHHc---CCcEEEeCCCCC--HHHHHHHHHC
Confidence 45778888999999999999999876421 1 110 1122346667777653 2334443 4444 6666666677
Q ss_pred C-CCeeeec
Q psy2895 164 L-PDVLNHN 171 (293)
Q Consensus 164 G-~~~i~~~ 171 (293)
| +|.+.++
T Consensus 317 G~aD~V~iG 325 (363)
T 3l5l_A 317 NQLDLVSVG 325 (363)
T ss_dssp TSCSEEECC
T ss_pred CCccEEEec
Confidence 7 8998875
No 257
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=61.59 E-value=76 Score=27.06 Aligned_cols=124 Identities=13% Similarity=0.097 Sum_probs=64.9
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeec---C-----CCC--CCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHH
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVN---R-----DDL--HDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVL 157 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~---~-----~~l--~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l 157 (293)
...+.++ +.+.+.|+.-+ +.--. - ..+ ....++...++++..++. ++---+|. .+ .+..
T Consensus 108 ~~~g~~L---e~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~--gL~Ti~~v---~~--~eeA 176 (286)
T 2p10_A 108 MVMSTFL---RELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKL--DLLTTPYV---FS--PEDA 176 (286)
T ss_dssp CCHHHHH---HHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHT--TCEECCEE---CS--HHHH
T ss_pred cCHHHHH---HHHHHhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHC--CCeEEEec---CC--HHHH
Confidence 4566666 55566788876 32110 0 000 122356777788887776 33211233 22 7788
Q ss_pred HHHHHcCCCeeeeccc--cchHHHhhcCCCCCHHH----HHHHHHHHHHhCCCceeeEeEEeec--CCCHHHHHHHHHH
Q psy2895 158 KIFKQALPDVLNHNIE--TVPRLYKKVRPGSDYKH----SLNLLKNFKKLYPNILTKSGIMVGL--GENDEEILTVIHD 228 (293)
Q Consensus 158 ~~l~~aG~~~i~~~le--ss~~~~~~i~~~~~~e~----~l~~i~~~~~~~pgi~~~~~~ivG~--gEt~ed~~~~l~~ 228 (293)
+.+.++|.|.+.+..- +.+.+=- ....+.++ +.+.++.+++..|++. ++.|- -.|.+|+...++.
T Consensus 177 ~amA~agpDiI~~h~glT~gglIG~--~~avs~~~~~e~i~~i~~a~~~vnpdvi----vLc~gGpIstpeDv~~~l~~ 249 (286)
T 2p10_A 177 VAMAKAGADILVCHMGLTTGGAIGA--RSGKSMDDCVSLINECIEAARTIRDDII----ILSHGGPIANPEDARFILDS 249 (286)
T ss_dssp HHHHHHTCSEEEEECSCC-----------CCCHHHHHHHHHHHHHHHHHHCSCCE----EEEESTTCCSHHHHHHHHHH
T ss_pred HHHHHcCCCEEEECCCCCCCCcccC--CCcccHHHhHHHHHHHHHHHHHhCCCcE----EEecCCCCCCHHHHHHHHhc
Confidence 8999999999765332 1111110 11234444 4455556666655542 23332 3789998877753
No 258
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=61.54 E-value=25 Score=29.16 Aligned_cols=79 Identities=10% Similarity=0.022 Sum_probs=49.5
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCee
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVL 168 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i 168 (293)
+...+.+.++.+.+.|++.+++---+....+. ...=..+++.+++..+. .++++.. .. +..++.+.++|.|.+
T Consensus 24 D~~~l~~~i~~~~~~gad~lhvDvmDG~fvpn--~t~G~~~v~~lr~~~~~-DvhLMv~--~p--~~~i~~~~~aGAd~i 96 (237)
T 3cu2_A 24 NWLQLNEEVTTLLENQINVLHFDIADGQFSSL--FTVGAIGIKYFPTHCFK-DVHLMVR--NQ--LEVAKAVVANGANLV 96 (237)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSC--BCBCTHHHHTSCTTSEE-EEEEECS--CH--HHHHHHHHHTTCSEE
T ss_pred CcccHHHHHHHHHHcCCCEEEEEEecCccccc--hhhhHHHHHHHhhhCCC-CeEEEEE--CH--HHHHHHHHHcCCCEE
Confidence 45567777788888899976654323211111 11112667777776543 7777642 11 567888999999998
Q ss_pred eecccc
Q psy2895 169 NHNIET 174 (293)
Q Consensus 169 ~~~les 174 (293)
.+..|+
T Consensus 97 tvH~ea 102 (237)
T 3cu2_A 97 TLQLEQ 102 (237)
T ss_dssp EEETTC
T ss_pred EEecCC
Confidence 877665
No 259
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=61.28 E-value=12 Score=35.53 Aligned_cols=70 Identities=11% Similarity=0.104 Sum_probs=50.2
Q ss_pred HHHHHHHHHcCCCeeeec-c-cc-c-----hHHHhhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHH
Q psy2895 154 NHVLKIFKQALPDVLNHN-I-ET-V-----PRLYKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEIL 223 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~-l-es-s-----~~~~~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~ 223 (293)
.+.|+.|++.|++.|.+. + ++ + ..-|-.+.+. .+.++..+.++.+|++ ||.|-.++++.+ +..-..+.
T Consensus 175 ~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~--Gi~VilD~V~NH~~~~~~~f~ 252 (583)
T 1ea9_C 175 IDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHER--GIRVLLDAVFNHSGRTFPPFV 252 (583)
T ss_dssp HHTHHHHHHHTCSEEEECCCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTT--TCEEEEECCCSBCCTTTHHHH
T ss_pred HHhhHHHHHcCCCEEEECCCccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHC--CCEEEEEEccccCCCccHHHH
Confidence 456888999999998763 2 32 1 1223344544 3889999999999999 999999999998 65544444
Q ss_pred HH
Q psy2895 224 TV 225 (293)
Q Consensus 224 ~~ 225 (293)
+.
T Consensus 253 ~~ 254 (583)
T 1ea9_C 253 DV 254 (583)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 260
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=61.17 E-value=17 Score=31.49 Aligned_cols=101 Identities=13% Similarity=0.188 Sum_probs=54.5
Q ss_pred hhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcCcHHHHHHHHHHcCCCee
Q psy2895 90 IEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRNQINHVLKIFKQALPDVL 168 (293)
Q Consensus 90 ~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~~~~e~l~~l~~aG~~~i 168 (293)
.++..+.++.+.+.|+..|.+.|+...+.... ...+ +++..+++ .+.+..+ ++.+ .++..+.+.+.|+|.+
T Consensus 139 ~~~~~~~a~~l~~~G~d~i~v~g~~~~~~~~~-~~~~-~~i~~i~~-----~ipVi~~GgI~s-~~da~~~l~~~gad~V 210 (318)
T 1vhn_A 139 KNEVEEIYRILVEEGVDEVFIHTRTVVQSFTG-RAEW-KALSVLEK-----RIPTFVSGDIFT-PEDAKRALEESGCDGL 210 (318)
T ss_dssp SCCHHHHHHHHHHTTCCEEEEESSCTTTTTSS-CCCG-GGGGGSCC-----SSCEEEESSCCS-HHHHHHHHHHHCCSEE
T ss_pred hHHHHHHHHHHHHhCCCEEEEcCCCccccCCC-CcCH-HHHHHHHc-----CCeEEEECCcCC-HHHHHHHHHcCCCCEE
Confidence 34445788888899999999988764221111 1112 44555554 2334333 5444 1444455544799999
Q ss_pred eeccc--cchHHHhhcC--------CCCCHHHHHHHHHHH
Q psy2895 169 NHNIE--TVPRLYKKVR--------PGSDYKHSLNLLKNF 198 (293)
Q Consensus 169 ~~~le--ss~~~~~~i~--------~~~~~e~~l~~i~~~ 198 (293)
.++=- ..+.++.++. +..+.+++++.+..-
T Consensus 211 ~iGR~~l~~P~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 250 (318)
T 1vhn_A 211 LVARGAIGRPWIFKQIKDFLRSGKYSEPSREEILRTFERH 250 (318)
T ss_dssp EESGGGTTCTTHHHHHHHHHHHSCCCCCCHHHHHHHHHHH
T ss_pred EECHHHHhCcchHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 88522 2344444432 123566666655443
No 261
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=60.91 E-value=30 Score=30.82 Aligned_cols=86 Identities=10% Similarity=0.185 Sum_probs=50.4
Q ss_pred HHHHHHHHcCCCeeeeccc-c--chHHHhhc-C-C----CCCHHH----HHHHHHHHHHhCCCceeeEeE-----Eeec-
Q psy2895 155 HVLKIFKQALPDVLNHNIE-T--VPRLYKKV-R-P----GSDYKH----SLNLLKNFKKLYPNILTKSGI-----MVGL- 215 (293)
Q Consensus 155 e~l~~l~~aG~~~i~~~le-s--s~~~~~~i-~-~----~~~~e~----~l~~i~~~~~~~pgi~~~~~~-----ivG~- 215 (293)
+..++.+++|.|.|.+..- + ....+.-. + | +.+.+. .+++++.++++.+.-.+..-+ .-|.
T Consensus 170 ~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~v~vrls~~~~~~~~~ 249 (377)
T 2r14_A 170 QAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGPERVGIRLTPFLELFGLT 249 (377)
T ss_dssp HHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCCTTCC
T ss_pred HHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCCCcEEEEeccccccCCCC
Confidence 3444556789999987532 2 13333221 1 1 234444 456677777764311333222 1111
Q ss_pred -CCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 216 -GENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 216 -gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
|.+.++..+.++.+.+.|++.+.++
T Consensus 250 ~~~~~~~~~~la~~le~~Gvd~i~v~ 275 (377)
T 2r14_A 250 DDEPEAMAFYLAGELDRRGLAYLHFN 275 (377)
T ss_dssp CSCHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 4567888999999999999999886
No 262
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=60.79 E-value=52 Score=28.02 Aligned_cols=144 Identities=15% Similarity=0.140 Sum_probs=82.8
Q ss_pred CChhHHHHHHHHHHHCCCc-EEEEeeecCC-----CCCCCChhHHHHHHHHHHhhCCCcEEEE-EcCCCcC-cHHHHHHH
Q psy2895 88 LDIEEPKKIAYTINKLKLN-YVVITSVNRD-----DLHDGGSSHFVSCIKHIRKLSTKIKIEI-LIPDFRN-QINHVLKI 159 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~-~i~l~gg~~~-----~l~~~~~~~~~~ll~~i~~~~~~~~i~~-~~~~~~~-~~~e~l~~ 159 (293)
.++++..+.++.+.+.|+. .|.+..+.|. .+ ..+.+.+.++++.+++.. ++.+.+ .++++.. +..+.++.
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~-g~~~e~~~~iv~~vr~~~-~~Pv~vKi~~~~~~~~~~~~a~~ 180 (311)
T 1jub_A 103 MSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQL-AYDFEATEKLLKEVFTFF-TKPLGVKLPPYFDLVHFDIMAEI 180 (311)
T ss_dssp SSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCG-GGCHHHHHHHHHHHTTTC-CSCEEEEECCCCSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccc-cCCHHHHHHHHHHHHHhc-CCCEEEEECCCCCHHHHHHHHHH
Confidence 4678899999999999998 8877655431 11 124567889999998763 223333 2344321 12344778
Q ss_pred HHHcCCCeeeec--------ccc-chHH-Hh---h---cCCCCCHHHHHHHHHHHHHhCC-CceeeEeEEeecCCCHHHH
Q psy2895 160 FKQALPDVLNHN--------IET-VPRL-YK---K---VRPGSDYKHSLNLLKNFKKLYP-NILTKSGIMVGLGENDEEI 222 (293)
Q Consensus 160 l~~aG~~~i~~~--------les-s~~~-~~---~---i~~~~~~e~~l~~i~~~~~~~p-gi~~~~~~ivG~gEt~ed~ 222 (293)
+.++|+|.+.+. ++. .... .. . +.........++.++.+++..+ ++++ +..|=-.|.+|.
T Consensus 181 ~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipv---i~~GGI~~~~da 257 (311)
T 1jub_A 181 LNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQI---IGTGGIETGQDA 257 (311)
T ss_dssp HTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEE---EEESSCCSHHHH
T ss_pred HHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCE---EEECCCCCHHHH
Confidence 888999998652 110 0000 00 0 0000012334677888877643 4433 112224688888
Q ss_pred HHHHHHHHhCCCCEEEee
Q psy2895 223 LTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 223 ~~~l~~l~~l~~~~i~i~ 240 (293)
.+.+. .|.+.+.+.
T Consensus 258 ~~~l~----~GAd~V~vg 271 (311)
T 1jub_A 258 FEHLL----CGATMLQIG 271 (311)
T ss_dssp HHHHH----HTCSEEEEC
T ss_pred HHHHH----cCCCEEEEc
Confidence 77763 589998885
No 263
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=60.67 E-value=49 Score=29.00 Aligned_cols=43 Identities=7% Similarity=-0.128 Sum_probs=21.0
Q ss_pred CHHHHHHHHHHHHHhCCCceeeEeEEeec-C-CCHHHHHHHHHHHHh
Q psy2895 187 DYKHSLNLLKNFKKLYPNILTKSGIMVGL-G-ENDEEILTVIHDMRN 231 (293)
Q Consensus 187 ~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-g-Et~ed~~~~l~~l~~ 231 (293)
+.++.++..+.+.+. |..-..-+---+ . -|.+++.++.+.+.+
T Consensus 103 st~eai~la~~A~~~--Gadavlv~~P~y~~~~s~~~l~~~f~~IA~ 147 (344)
T 2hmc_A 103 NTASAVAHAVHAQKV--GAKGLMVIPRVLSRGSVIAAQKAHFKAILS 147 (344)
T ss_dssp SHHHHHHHHHHHHHH--TCSEEEECCCCSSSTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhc--CCCEEEECCCccCCCCCHHHHHHHHHHHHh
Confidence 555566666666666 552111111111 3 466666666665554
No 264
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=60.59 E-value=39 Score=28.67 Aligned_cols=82 Identities=7% Similarity=0.000 Sum_probs=50.1
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcC-cHHHHHHHHHHcC
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRN-QINHVLKIFKQAL 164 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~-~~~e~l~~l~~aG 164 (293)
..++.+.+.+.++.+.+.|+..+++.|.... .+..+.+.-.++++.+.+...+ +-+.+.+... +..+..+..+++|
T Consensus 14 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE-~~~Ls~~Er~~v~~~~~~~~~g--vi~Gvg~~~t~~ai~la~~A~~~G 90 (286)
T 2r91_A 14 GRLDPELFANHVKNITSKGVDVVFVAGTTGL-GPALSLQEKMELTDAATSAARR--VIVQVASLNADEAIALAKYAESRG 90 (286)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEEETSTTTT-GGGSCHHHHHHHHHHHHHHCSS--EEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CccCHHHHHHHHHHHHHCCCCEEEECccccC-hhhCCHHHHHHHHHHHHHHhCC--EEEeeCCCCHHHHHHHHHHHHhcC
Confidence 4578888889999888899998887664421 1122356667778877766544 3232221111 1134555566679
Q ss_pred CCeeee
Q psy2895 165 PDVLNH 170 (293)
Q Consensus 165 ~~~i~~ 170 (293)
+|.+.+
T Consensus 91 adavlv 96 (286)
T 2r91_A 91 AEAVAS 96 (286)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 888765
No 265
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=60.46 E-value=52 Score=28.12 Aligned_cols=82 Identities=11% Similarity=0.079 Sum_probs=51.6
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeec--CCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcCCCcC-cHHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVN--RDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIPDFRN-QINHVLKIFK 161 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~--~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~~~~~-~~~e~l~~l~ 161 (293)
..++.+.+.+.++.+.+.|+..+++.|.. .+.+ +.+.-.++++.+.+.. ..+.|-+.+.+... +..+..+...
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~L---s~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~ 104 (301)
T 1xky_A 28 GNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTL---TSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKAT 104 (301)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGS---CHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhC---CHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHH
Confidence 46899999999999999999998887654 3333 3456666777665542 22334333321111 1244555666
Q ss_pred HcCCCeeee
Q psy2895 162 QALPDVLNH 170 (293)
Q Consensus 162 ~aG~~~i~~ 170 (293)
++|+|.+.+
T Consensus 105 ~~Gadavlv 113 (301)
T 1xky_A 105 EVGVDAVML 113 (301)
T ss_dssp HTTCSEEEE
T ss_pred hcCCCEEEE
Confidence 789998754
No 266
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=60.40 E-value=28 Score=31.24 Aligned_cols=82 Identities=7% Similarity=0.033 Sum_probs=50.4
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCC--CChhHHHHHHHHHHhhC-CCcEEEEEcC-CCcC-cHHHHHHHHHH
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHD--GGSSHFVSCIKHIRKLS-TKIKIEILIP-DFRN-QINHVLKIFKQ 162 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~--~~~~~~~~ll~~i~~~~-~~~~i~~~~~-~~~~-~~~e~l~~l~~ 162 (293)
.+++++.+.++++.+.|++.+-+.|........ .+.+.-.+.++.+++.. |++.+.+=.+ ++.. +..+.++.|.+
T Consensus 124 ~~~e~~~~~a~~~~~~G~~~iKl~G~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~~~~~~~A~~~~~~L~~ 203 (405)
T 3rr1_A 124 DRPADVIAGMKALQAGGFDHFKLNGCEEMGIIDTSRAVDAAVARVAEIRSAFGNTVEFGLDFHGRVSAPMAKVLIKELEP 203 (405)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEESCCSSSCBCSHHHHHHHHHHHHHHHHTTGGGSEEEEECCSCBCHHHHHHHHHHHGG
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCcccccccchhHHHHHHHHHHHHHHhCCCceEEEECCCCCCHHHHHHHHHHHHh
Confidence 578999999999999999999884443211100 11344567788888765 5666666444 3321 11334566777
Q ss_pred cCCCeee
Q psy2895 163 ALPDVLN 169 (293)
Q Consensus 163 aG~~~i~ 169 (293)
.|+..+.
T Consensus 204 ~~i~~iE 210 (405)
T 3rr1_A 204 YRPLFIE 210 (405)
T ss_dssp GCCSCEE
T ss_pred cCCCEEE
Confidence 7776653
No 267
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=60.38 E-value=11 Score=31.39 Aligned_cols=131 Identities=15% Similarity=0.172 Sum_probs=72.1
Q ss_pred hHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeee
Q psy2895 91 EEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNH 170 (293)
Q Consensus 91 eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~ 170 (293)
.+.++.++...+.|++++++.--+.. . . +.....++++.+.+.. .+.+.+- .|..+ .+.++.+-++|++++.+
T Consensus 31 ~dP~~~a~~~~~~gad~lhvvDld~a-~-~-~~~~~~~~i~~i~~~~-~~pl~vG-GGIrs--~e~~~~~l~~GadkVii 103 (243)
T 4gj1_A 31 YNPLKKFKEYEKAGAKELHLVDLTGA-K-D-PSKRQFALIEKLAKEV-SVNLQVG-GGIRS--KEEVKALLDCGVKRVVI 103 (243)
T ss_dssp CCHHHHHHHHHHHTCCEEEEEEHHHH-H-C-GGGCCHHHHHHHHHHC-CSEEEEE-SSCCC--HHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHCCCCEEEEEecCcc-c-c-cchhHHHHHHHHHHhc-CCCeEec-ccccc--HHHHHHHHHcCCCEEEE
Confidence 45677788888899999988643310 0 0 0112346777777653 2344442 25555 67888888899999998
Q ss_pred ccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEE------eec----CCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 171 NIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIM------VGL----GENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 171 ~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~i------vG~----gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
+-... .+++-..+..+..-.. -+.++.+.. +-. ..|.-+..+.++.+.++++..+-++
T Consensus 104 ~t~a~----------~~p~li~e~~~~~g~q--~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~~g~~eil~t 171 (243)
T 4gj1_A 104 GSMAI----------KDATLCLEILKEFGSE--AIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNKGLKHILCT 171 (243)
T ss_dssp CTTTT----------TCHHHHHHHHHHHCTT--TEEEEEEEEESSSEEEC--------CCBHHHHHHHHHTTTCCEEEEE
T ss_pred ccccc----------cCCchHHHHHhcccCc--eEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhhcCCcEEEee
Confidence 74331 1222222322222111 233344432 211 1233446677777888888887665
No 268
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=60.33 E-value=63 Score=27.74 Aligned_cols=16 Identities=6% Similarity=-0.078 Sum_probs=8.8
Q ss_pred ChhcHHHHHHHHHhcC
Q psy2895 25 NIDNFNKTKNILRANN 40 (293)
Q Consensus 25 g~~~~~~~~~l~~~~~ 40 (293)
|..+.+++.+......
T Consensus 26 G~~~~~elv~~A~~~G 41 (301)
T 3o0f_A 26 GTETPRTLVEQARKLG 41 (301)
T ss_dssp CSSCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHcC
Confidence 4456666666554433
No 269
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=60.27 E-value=99 Score=28.91 Aligned_cols=114 Identities=14% Similarity=0.181 Sum_probs=64.1
Q ss_pred hHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeee
Q psy2895 91 EEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNH 170 (293)
Q Consensus 91 eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~ 170 (293)
+.+.+.++++.+.|++.|.+-- ++.. ...+.++++.+++.....++.+..++.. +...+.|.|.+|+
T Consensus 25 ~~l~~~ve~al~~Gv~~vQlR~---K~~~---~~~~~~~a~~l~~l~~~~~v~liIND~~-------dlA~~~gAdGVHL 91 (540)
T 3nl6_A 25 KTLYGQVEAGLQNGVTLVQIRE---KDAD---TKFFIEEALQIKELCHAHNVPLIINDRI-------DVAMAIGADGIHV 91 (540)
T ss_dssp CCHHHHHHHHHHTTCSEEEECC---SSSC---TTHHHHHHHHHHHHHHHTTCCEEECSCS-------HHHHHTTCSEEEE
T ss_pred chHHHHHHHHHHCCCCEEEEec---CCCC---HHHHHHHHHHHHHHHHhcCCEEEEeCcH-------HHHHHcCCCEEEE
Confidence 4567777888889999888742 2222 2355566665554321224555554322 2233579999999
Q ss_pred ccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhCC---CCEEEeecCCC
Q psy2895 171 NIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNHN---IDILTIGQYLM 244 (293)
Q Consensus 171 ~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l~---~~~i~i~~~~~ 244 (293)
+.+.. .. ..+|+.. | .+.++|. -.|.++... ..+.| +|++.+.+.++
T Consensus 92 gq~dl-----------~~-------~~ar~~l-g----~~~iiG~S~ht~eea~~----A~~~G~~~aDYv~~Gpvf~ 142 (540)
T 3nl6_A 92 GQDDM-----------PI-------PMIRKLV-G----PDMVIGWSVGFPEEVDE----LSKMGPDMVDYIGVGTLFP 142 (540)
T ss_dssp CTTSS-----------CH-------HHHHHHH-C----TTSEEEEEECSHHHHHH----HHHTCC--CCEEEESCCSC
T ss_pred Chhhc-----------CH-------HHHHHHh-C----CCCEEEEECCCHHHHHH----HHHcCCCCCCEEEEcCCCC
Confidence 85431 11 1222221 1 1345666 557776543 45678 89998876554
No 270
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=60.21 E-value=47 Score=27.80 Aligned_cols=135 Identities=16% Similarity=0.126 Sum_probs=82.5
Q ss_pred ChhHHHHHHHHHHhhCCCcEEEEEc--CCCcCc--HHHHHHHHHHcCCCeeeecccc-chHHHhhcCCCCCHHHHHHHHH
Q psy2895 122 GSSHFVSCIKHIRKLSTKIKIEILI--PDFRNQ--INHVLKIFKQALPDVLNHNIET-VPRLYKKVRPGSDYKHSLNLLK 196 (293)
Q Consensus 122 ~~~~~~~ll~~i~~~~~~~~i~~~~--~~~~~~--~~e~l~~l~~aG~~~i~~~les-s~~~~~~i~~~~~~e~~l~~i~ 196 (293)
+..++.++++..-... + .+++.. ..+..+ +++.++..+++|+..++.+ + .+..+. ...++++++
T Consensus 24 g~~~~~d~Le~~g~yI-D-~lKfg~Gt~~l~~~~~l~eki~l~~~~gV~v~~GG--Tl~E~~~~----qg~~~~yl~--- 92 (251)
T 1qwg_A 24 PPKFVEDYLKVCGDYI-D-FVKFGWGTSAVIDRDVVKEKINYYKDWGIKVYPGG--TLFEYAYS----KGKFDEFLN--- 92 (251)
T ss_dssp CHHHHHHHHHHHGGGC-S-EEEECTTGGGGSCHHHHHHHHHHHHTTTCEEEECH--HHHHHHHH----TTCHHHHHH---
T ss_pred CHHHHHHHHHHhhhhc-c-eEEecCceeeecCHHHHHHHHHHHHHcCCeEECCc--HHHHHHHH----cCcHHHHHH---
Confidence 3678889998777653 3 466643 233333 4788888999999877776 2 233332 236777766
Q ss_pred HHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhCCCCEEE-eecCCCCCCCccccccccChhHHHHHHHHHHHhccc
Q psy2895 197 NFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNHNIDILT-IGQYLMPSRLHLPVHRYLHPKFFEKFKKIAYKLGFK 274 (293)
Q Consensus 197 ~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l~~~~i~-i~~~~~p~~~~~a~~r~~~p~~~~~~~~~~~~~G~~ 274 (293)
.+++. |+.. +-+--|+ .-+.++..+.++.+++.|+..++ +... ..+......|..+.+..+...+.|-.
T Consensus 93 ~~k~l--Gf~~-iEiS~G~i~l~~~~~~~~I~~~~~~G~~v~~EvG~k------~~~~~~~~~~~~~I~~~~~~LeAGA~ 163 (251)
T 1qwg_A 93 ECEKL--GFEA-VEISDGSSDISLEERNNAIKRAKDNGFMVLTEVGKK------MPDKDKQLTIDDRIKLINFDLDAGAD 163 (251)
T ss_dssp HHHHH--TCCE-EEECCSSSCCCHHHHHHHHHHHHHTTCEEEEEECCS------SHHHHTTCCHHHHHHHHHHHHHHTCS
T ss_pred HHHHc--CCCE-EEECCCcccCCHHHHHHHHHHHHHCCCEEeeecccc------CCcccCCCCHHHHHHHHHHHHHCCCc
Confidence 66677 8842 3344566 78899999999999999986532 1101 11112334556665555555555655
Q ss_pred ch
Q psy2895 275 NV 276 (293)
Q Consensus 275 ~~ 276 (293)
.+
T Consensus 164 ~V 165 (251)
T 1qwg_A 164 YV 165 (251)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 271
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=60.19 E-value=86 Score=27.24 Aligned_cols=137 Identities=15% Similarity=0.168 Sum_probs=83.4
Q ss_pred hhHHHHHHHHHH-HCCCcEEEEeeec-CCCCCCCChhHHHHHHHHHHhhCCCcEEEEE-c-CCCcCcHHHHHHHHHHcCC
Q psy2895 90 IEEPKKIAYTIN-KLKLNYVVITSVN-RDDLHDGGSSHFVSCIKHIRKLSTKIKIEIL-I-PDFRNQINHVLKIFKQALP 165 (293)
Q Consensus 90 ~eei~~~~~~~~-~~G~~~i~l~gg~-~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~-~-~~~~~~~~e~l~~l~~aG~ 165 (293)
.+++.+.+++.. +.|+..|-+.+.. .|...+.+.+....+++.+.+.. ++.|.+- + +.... .+++++--++|.
T Consensus 79 ~~~~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~-~vPlsIDg~~~~T~~--~eV~eaAleaga 155 (323)
T 4djd_D 79 INEPGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAV-GVPLVVVGCGDVEKD--HEVLEAVAEAAA 155 (323)
T ss_dssp TTCHHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHC-CSCEEEECCSCHHHH--HHHHHHHHHHTT
T ss_pred HHhHHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhC-CceEEEECCCCCCCC--HHHHHHHHHhcC
Confidence 456888899888 8899988876432 23222334567778888887753 4556664 1 00122 567777666775
Q ss_pred C---eee-eccccchHHHhhcC---------CCCCHHHHHHHHHHHHHhCCCce---eeEeEEee-cCCCHHHHHHHHHH
Q psy2895 166 D---VLN-HNIETVPRLYKKVR---------PGSDYKHSLNLLKNFKKLYPNIL---TKSGIMVG-LGENDEEILTVIHD 228 (293)
Q Consensus 166 ~---~i~-~~less~~~~~~i~---------~~~~~e~~l~~i~~~~~~~pgi~---~~~~~ivG-~gEt~ed~~~~l~~ 228 (293)
+ -++ ++.+..+++...+. ...+.+-..+.++.+.++ |+. +-.|-.+| +|-+.++-.++++.
T Consensus 156 g~~~lINsv~~~~~~~m~~laa~~g~~vVlmh~~d~~~~~~l~~~a~~~--GI~~e~IIlDPg~g~fgk~~e~~l~~l~~ 233 (323)
T 4djd_D 156 GENLLLGNAEQENYKSLTAACMVHKHNIIARSPLDINICKQLNILINEM--NLPLDHIVIDPSIGGLGYGIEYSFSIMER 233 (323)
T ss_dssp TSCCEEEEEBTTBCHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHHTT--TCCGGGEEEECCCCCTTTTHHHHHHHHHH
T ss_pred CCCCeEEECCcccHHHHHHHHHHhCCeEEEEccchHHHHHHHHHHHHHc--CCCHHHEEEeCCCccccCCHHHHHHHHHH
Confidence 4 222 23222244443222 112445555666778888 982 55666667 58899998888888
Q ss_pred HHh
Q psy2895 229 MRN 231 (293)
Q Consensus 229 l~~ 231 (293)
++.
T Consensus 234 ir~ 236 (323)
T 4djd_D 234 IRL 236 (323)
T ss_dssp HHH
T ss_pred HHH
Confidence 875
No 272
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=60.13 E-value=57 Score=26.60 Aligned_cols=41 Identities=10% Similarity=0.143 Sum_probs=25.5
Q ss_pred HHHHH-HHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 190 HSLNL-LKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 190 ~~l~~-i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
..++. +..+++. |+.+ ++---||.+++ +.++++|++.+.=+
T Consensus 200 ~~l~~i~~~a~~l--~~~v----iaeGVEt~~~~----~~l~~~G~~~~QG~ 241 (250)
T 4f3h_A 200 EKIREITSRAQPT--GILT----VAEFVADAQSM----SSFFTAGVDYVQGD 241 (250)
T ss_dssp HHHHHTHHHHHHH--TCEE----EECCCCCHHHH----HHHHHHTCSEECST
T ss_pred HHHHHHHHHHHHc--CCEE----EEeccCCHHHH----HHHHHcCCCEEeec
Confidence 33443 5567777 7755 22224777764 66788999987543
No 273
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=60.11 E-value=38 Score=29.50 Aligned_cols=84 Identities=14% Similarity=0.037 Sum_probs=52.0
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCC-CcEEEEEcCCCc-CcHHHHHHHHHHc
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLST-KIKIEILIPDFR-NQINHVLKIFKQA 163 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~-~~~i~~~~~~~~-~~~~e~l~~l~~a 163 (293)
..++.+.+.+.++.+.+.|+..+++.|.... .+..+.+.-.++++.+.+... .+.|-+.+.+.. .+..+..+...++
T Consensus 50 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE-~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~ 128 (332)
T 2r8w_A 50 GRVDIEAFSALIARLDAAEVDSVGILGSTGI-YMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAA 128 (332)
T ss_dssp CCBCHHHHHHHHHHHHHHTCSEEEESSTTTT-GGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccC-hhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhc
Confidence 4689999999999999999999988765431 112235566677776665432 334433332111 1123455566678
Q ss_pred CCCeeee
Q psy2895 164 LPDVLNH 170 (293)
Q Consensus 164 G~~~i~~ 170 (293)
|+|.+.+
T Consensus 129 Gadavlv 135 (332)
T 2r8w_A 129 GADALLL 135 (332)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9998765
No 274
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=60.06 E-value=20 Score=31.08 Aligned_cols=81 Identities=14% Similarity=0.112 Sum_probs=48.7
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecC--CCC-------CCC---C---hhHHHHHHHHHHhhCCCcEEEEEc-CCCcC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNR--DDL-------HDG---G---SSHFVSCIKHIRKLSTKIKIEILI-PDFRN 151 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~--~~l-------~~~---~---~~~~~~ll~~i~~~~~~~~i~~~~-~~~~~ 151 (293)
++.+++.+.++.+.+.|+..|.++++.. .++ ... + .....+.++.+++..++ .+.+.. .++.+
T Consensus 222 ~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~-~ipVi~~GGI~~ 300 (336)
T 1f76_A 222 LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNG-RLPIIGVGGIDS 300 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTT-SSCEEEESSCCS
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCC-CCCEEEECCCCC
Confidence 5567889999999999999999876531 000 000 0 12344677777775321 233433 35554
Q ss_pred cHHHHHHHHHHcCCCeeeec
Q psy2895 152 QINHVLKIFKQALPDVLNHN 171 (293)
Q Consensus 152 ~~~e~l~~l~~aG~~~i~~~ 171 (293)
.+.+.++-++|.|.+.++
T Consensus 301 --~~da~~~l~~GAd~V~ig 318 (336)
T 1f76_A 301 --VIAAREKIAAGASLVQIY 318 (336)
T ss_dssp --HHHHHHHHHHTCSEEEES
T ss_pred --HHHHHHHHHCCCCEEEee
Confidence 444444445899999875
No 275
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=59.90 E-value=11 Score=35.48 Aligned_cols=69 Identities=13% Similarity=0.126 Sum_probs=46.5
Q ss_pred HHHHHHHHHcCCCeeeec-c-cc-c------hHHHhhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHH
Q psy2895 154 NHVLKIFKQALPDVLNHN-I-ET-V------PRLYKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEI 222 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~-l-es-s------~~~~~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~ 222 (293)
.+.|..|++.|++.|.++ + ++ . ..-|..+.+. .+.++..+.++.+|+. ||.|-.++++.+ +..-.-+
T Consensus 48 ~~~LdyL~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~aH~~--Gi~VilD~V~NH~s~~~~wf 125 (570)
T 1m53_A 48 IEKLDYLKSLGIDAIWINPHYDSPNTDNGYDISNYRQIMKEYGTMEDFDSLVAEMKKR--NMRLMIDVVINHTSDQHPWF 125 (570)
T ss_dssp HHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHT--TCEEEEEECCSBCCTTSHHH
T ss_pred HHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHC--CCEEEEEEeccccccccHHH
Confidence 455677777787777653 2 22 1 1112234443 3899999999999999 999999999998 5543344
Q ss_pred HH
Q psy2895 223 LT 224 (293)
Q Consensus 223 ~~ 224 (293)
.+
T Consensus 126 ~~ 127 (570)
T 1m53_A 126 IQ 127 (570)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 276
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=59.82 E-value=92 Score=27.43 Aligned_cols=128 Identities=15% Similarity=0.133 Sum_probs=73.7
Q ss_pred HHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeeccc
Q psy2895 94 KKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIE 173 (293)
Q Consensus 94 ~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~le 173 (293)
.+.++.+.+.|+..|++..... +...+.+.++.+++.. +..+-+. ...+ .+.++.+.++|+|.+.++..
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G------~~~~~~~~i~~i~~~~-~~~Vivg--~v~t--~e~A~~l~~aGaD~I~VG~~ 175 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHG------HSLNIIRTLKEIKSKM-NIDVIVG--NVVT--EEATKELIENGADGIKVGIG 175 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCC------SBHHHHHHHHHHHHHC-CCEEEEE--EECS--HHHHHHHHHTTCSEEEECSS
T ss_pred HHHHHHHHHcCcCeEEEeCCCC------CcHHHHHHHHHHHHhc-CCcEEEc--cCCC--HHHHHHHHHcCcCEEEEecC
Confidence 5566777788999888743332 1356778888888875 3333331 1123 67788888999999988653
Q ss_pred c-c---hHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecC-CCHHHHHHHHHHHHhCCCCEEEeecCC
Q psy2895 174 T-V---PRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLG-ENDEEILTVIHDMRNHNIDILTIGQYL 243 (293)
Q Consensus 174 s-s---~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~g-Et~ed~~~~l~~l~~l~~~~i~i~~~~ 243 (293)
. + .+...... .-+.+-+.++.+.+++. ++++ |..-| .+.+|+.+.+. +|.+.+.+...+
T Consensus 176 ~Gs~~~tr~~~g~g-~p~~~~i~~v~~~~~~~--~iPV----IA~GGI~~~~di~kala----~GAd~V~vGs~~ 239 (361)
T 3khj_A 176 PGSICTTRIVAGVG-VPQITAIEKCSSVASKF--GIPI----IADGGIRYSGDIGKALA----VGASSVMIGSIL 239 (361)
T ss_dssp CCTTCCHHHHTCBC-CCHHHHHHHHHHHHHHH--TCCE----EEESCCCSHHHHHHHHH----HTCSEEEESTTT
T ss_pred CCcCCCcccccCCC-CCcHHHHHHHHHHHhhc--CCeE----EEECCCCCHHHHHHHHH----cCCCEEEEChhh
Confidence 3 2 12111111 11333344443444445 6543 33223 46777766654 588888776433
No 277
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=59.45 E-value=13 Score=34.10 Aligned_cols=34 Identities=9% Similarity=0.146 Sum_probs=29.4
Q ss_pred cCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec-CC
Q psy2895 182 VRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GE 217 (293)
Q Consensus 182 i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gE 217 (293)
+.+. .+.++..+.++.||+. ||.|-.++++.+ +.
T Consensus 71 id~~~Gt~~df~~lv~~aH~~--Gi~VilD~V~NH~~~ 106 (483)
T 3bh4_A 71 VRTKYGTKSELQDAIGSLHSR--NVQVYGDVVLNHKAG 106 (483)
T ss_dssp SSCSSCCHHHHHHHHHHHHHT--TCEEEEEECCSEECC
T ss_pred cCCCCCCHHHHHHHHHHHHHC--CCEEEEEEccCcccC
Confidence 5554 3899999999999999 999999999988 53
No 278
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=59.45 E-value=13 Score=34.08 Aligned_cols=34 Identities=15% Similarity=0.192 Sum_probs=29.5
Q ss_pred cCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec-CC
Q psy2895 182 VRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GE 217 (293)
Q Consensus 182 i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gE 217 (293)
+.+. .+.++..+.++.||+. ||.|-.++++.+ +.
T Consensus 75 idp~~Gt~~df~~Lv~~aH~~--Gi~VilD~V~NH~~~ 110 (485)
T 1wpc_A 75 VRTKYGTRSQLQAAVTSLKNN--GIQVYGDVVMNHKGG 110 (485)
T ss_dssp SSCSSCCHHHHHHHHHHHHHT--TCEEEEEECCSEECS
T ss_pred cCCCCCCHHHHHHHHHHHHHC--CCEEEEEEeccccCC
Confidence 5654 3899999999999999 999999999988 53
No 279
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=59.36 E-value=75 Score=26.26 Aligned_cols=78 Identities=12% Similarity=0.071 Sum_probs=47.5
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCCCCCC---------------CChhHHHHHHHHHHhhCCCcEEEEEc---CCCc
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRDDLHD---------------GGSSHFVSCIKHIRKLSTKIKIEILI---PDFR 150 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~---------------~~~~~~~~ll~~i~~~~~~~~i~~~~---~~~~ 150 (293)
+.++..+.++.+.+.|++.|.+..-..+++-+ .+.+...++++.+++. .++.+.++. +.+.
T Consensus 30 ~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~-~~~Pv~~m~~~~~~~~ 108 (262)
T 1rd5_A 30 DLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE-LSCPVVLLSYYKPIMF 108 (262)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG-CSSCEEEECCSHHHHS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCEEEEecCcHHHH
Confidence 35788889999999999988774221110101 1245567888888876 345565542 1111
Q ss_pred CcHHHHHHHHHHcCCCeeeec
Q psy2895 151 NQINHVLKIFKQALPDVLNHN 171 (293)
Q Consensus 151 ~~~~e~l~~l~~aG~~~i~~~ 171 (293)
. .++.+.++|++.+.++
T Consensus 109 ~----~~~~a~~aGadgv~v~ 125 (262)
T 1rd5_A 109 R----SLAKMKEAGVHGLIVP 125 (262)
T ss_dssp C----CTHHHHHTTCCEEECT
T ss_pred H----HHHHHHHcCCCEEEEc
Confidence 1 1234778999998874
No 280
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=59.36 E-value=25 Score=30.69 Aligned_cols=57 Identities=18% Similarity=0.168 Sum_probs=41.8
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCC-CCC-------CChhHHHHHHHHHHhhCCCcEEE
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDD-LHD-------GGSSHFVSCIKHIRKLSTKIKIE 143 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~-l~~-------~~~~~~~~ll~~i~~~~~~~~i~ 143 (293)
.++.+.+.++++++.++|++.|.|.|.-+.. ..+ .+---+...++.||+.+|++.|-
T Consensus 65 r~sid~l~~~~~~~~~lGi~~v~LFgv~~~~~~KD~~gs~A~~~~g~v~rair~iK~~~pdl~Vi 129 (342)
T 1h7n_A 65 RIGVNRLKDYLKPLVAKGLRSVILFGVPLIPGTKDPVGTAADDPAGPVIQGIKFIREYFPELYII 129 (342)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEEEEECCSTTCCBTTCGGGGCTTSHHHHHHHHHHHHCTTSEEE
T ss_pred eeCHHHHHHHHHHHHHCCCCEEEEecccCccCCCCccccccCCCCChHHHHHHHHHHHCCCeEEE
Confidence 3689999999999999999999988873210 110 01124778899999999986543
No 281
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=59.29 E-value=14 Score=34.62 Aligned_cols=67 Identities=15% Similarity=0.120 Sum_probs=45.9
Q ss_pred HHHHHHHHHcCCCeeeec-c-cc-c------hHHHhhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHH
Q psy2895 154 NHVLKIFKQALPDVLNHN-I-ET-V------PRLYKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEI 222 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~-l-es-s------~~~~~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~ 222 (293)
.+.|..|++.|++.|.+. + ++ . ..-|..+.+. .+.++..+.++.+|+. ||.|-.++++.+ +..-.-+
T Consensus 35 ~~~Ldyl~~LGv~~I~L~Pi~~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~--Gi~VilD~V~NHts~~~~wf 112 (557)
T 1zja_A 35 TEKLDYLKGLGIDAIWINPHYASPNTDNGYDISDYREVMKEYGTMEDFDRLMAELKKR--GMRLMVDVVINHSSDQHEWF 112 (557)
T ss_dssp HHTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHT--TCEEEEEECCSBCCTTSHHH
T ss_pred HHHHHHHHHcCCCEEEECCCccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHC--CCEEEEEEeccccccchhHH
Confidence 455677777777777652 2 22 1 1122345554 3899999999999999 999999999998 5543333
No 282
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=59.28 E-value=26 Score=31.16 Aligned_cols=16 Identities=25% Similarity=0.555 Sum_probs=10.4
Q ss_pred hHHHHHHHHHHHhccc
Q psy2895 259 KFFEKFKKIAYKLGFK 274 (293)
Q Consensus 259 ~~~~~~~~~~~~~G~~ 274 (293)
+.+.+..++.++.|++
T Consensus 158 ~~f~~~n~~~k~~Gi~ 173 (372)
T 2p0o_A 158 TFFNEKNRWLKELGLQ 173 (372)
T ss_dssp HHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHHCCCc
Confidence 3356666677777766
No 283
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=59.21 E-value=16 Score=31.30 Aligned_cols=71 Identities=10% Similarity=0.090 Sum_probs=41.3
Q ss_pred HHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcCcHHHHHHHHH-HcCCCeeeec
Q psy2895 94 KKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRNQINHVLKIFK-QALPDVLNHN 171 (293)
Q Consensus 94 ~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~~~~e~l~~l~-~aG~~~i~~~ 171 (293)
.+.++.+.++|+..|..+|+.+. - ..+.+.+.++++.... +|.+... |... +-+..+. .+|++.++.+
T Consensus 169 ~~Ale~Li~lGvdrILTSG~~~~-a-~~Gl~~Lk~Lv~~a~~-----rI~ImaGGGV~~---~Ni~~l~~~tG~~~~H~S 238 (287)
T 3iwp_A 169 MAALETLLTLGFERVLTSGCDSS-A-LEGLPLIKRLIEQAKG-----RIVVMPGGGITD---RNLQRILEGSGATEFHCS 238 (287)
T ss_dssp HHHHHHHHHHTCSEEEECTTSSS-T-TTTHHHHHHHHHHHTT-----SSEEEECTTCCT---TTHHHHHHHHCCSEEEEC
T ss_pred HHHHHHHHHcCCCEEECCCCCCC-h-HHhHHHHHHHHHHhCC-----CCEEEECCCcCH---HHHHHHHHhhCCCEEeEC
Confidence 44456666779999876666543 2 2335566665554322 4556553 4442 3344443 4899999987
Q ss_pred ccc
Q psy2895 172 IET 174 (293)
Q Consensus 172 les 174 (293)
.-+
T Consensus 239 ~~~ 241 (287)
T 3iwp_A 239 ARS 241 (287)
T ss_dssp CEE
T ss_pred cCc
Confidence 543
No 284
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=59.21 E-value=46 Score=34.36 Aligned_cols=105 Identities=13% Similarity=0.177 Sum_probs=67.0
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEc-C--CCcCcHHHHHHHHHHcC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILI-P--DFRNQINHVLKIFKQAL 164 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~-~--~~~~~~~e~l~~l~~aG 164 (293)
.+++.+++.++++.+.|+..|.|.--.. + .....+.++++.+++.. ++.|.+.+ + |+.. .-.+..+ ++|
T Consensus 706 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G--~--~~P~~~~~lv~~l~~~~-~~~i~~H~Hnd~GlAv--An~laAv-~aG 777 (1165)
T 2qf7_A 706 YDLKYYTNLAVELEKAGAHIIAVKDMAG--L--LKPAAAKVLFKALREAT-GLPIHFHTHDTSGIAA--ATVLAAV-EAG 777 (1165)
T ss_dssp GCHHHHHHHHHHHHHTTCSEEEEEETTC--C--CCHHHHHHHHHHHHHHC-SSCEEEEECBTTSCHH--HHHHHHH-HTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCccC--C--cCHHHHHHHHHHHHHhc-CCeEEEEECCCCCHHH--HHHHHHH-HhC
Confidence 5788899999999999999988753222 1 12567889999998876 45566654 2 3322 4566666 589
Q ss_pred CCeeeecccc-c--------hHHHhhcC-----CCCCHHHHHHHHHHHHH
Q psy2895 165 PDVLNHNIET-V--------PRLYKKVR-----PGSDYKHSLNLLKNFKK 200 (293)
Q Consensus 165 ~~~i~~~les-s--------~~~~~~i~-----~~~~~e~~l~~i~~~~~ 200 (293)
++.+...+.+ . +.+...+. .+.+.+...++-+.+.+
T Consensus 778 a~~vd~ti~GlGe~~Gn~~le~vv~~L~~~g~~tgidl~~L~~~s~~~~~ 827 (1165)
T 2qf7_A 778 VDAVDAAMDALSGNTSQPCLGSIVEALSGSERDPGLDPAWIRRISFYWEA 827 (1165)
T ss_dssp CSEEEEBCGGGCSBTSCCBHHHHHHHHTTSTTCCCCCHHHHHHHHHHHHH
T ss_pred CCEEEecccccCCCccchhHHHHHHHHHhcCCCccccHHHHHHHHHHHHH
Confidence 9998765432 1 33333322 24466666666555533
No 285
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=59.21 E-value=28 Score=30.79 Aligned_cols=87 Identities=9% Similarity=0.031 Sum_probs=48.9
Q ss_pred HHHHHHHHcCCCeeeeccc-c--chHHHhhc-C-C----CCCHHH----HHHHHHHHHHhCCCceeeEeE-----Eeec-
Q psy2895 155 HVLKIFKQALPDVLNHNIE-T--VPRLYKKV-R-P----GSDYKH----SLNLLKNFKKLYPNILTKSGI-----MVGL- 215 (293)
Q Consensus 155 e~l~~l~~aG~~~i~~~le-s--s~~~~~~i-~-~----~~~~e~----~l~~i~~~~~~~pgi~~~~~~-----ivG~- 215 (293)
+..++.+++|.|.|.++.- + ....+.-. + | +.+.+. .+++++.+++..+.-.+..-+ .-|.
T Consensus 165 ~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~pv~vris~~~~~~~~~ 244 (365)
T 2gou_A 165 QAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAIGAERVGVRLAPLTTLNGTV 244 (365)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHHCGGGEEEEECSSCCTTSCC
T ss_pred HHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHcCCCcEEEEEccccccCCCC
Confidence 4445567799999987531 1 01211111 1 1 235543 456666776654211222211 1111
Q ss_pred -CCCHHHHHHHHHHHHhCCCCEEEeec
Q psy2895 216 -GENDEEILTVIHDMRNHNIDILTIGQ 241 (293)
Q Consensus 216 -gEt~ed~~~~l~~l~~l~~~~i~i~~ 241 (293)
+.+.++..+.++.+.+.|++.+.++.
T Consensus 245 ~~~~~~~~~~~a~~l~~~G~d~i~v~~ 271 (365)
T 2gou_A 245 DADPILTYTAAAALLNKHRIVYLHIAE 271 (365)
T ss_dssp CSSHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 45778889999999999999999873
No 286
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=59.02 E-value=13 Score=35.32 Aligned_cols=60 Identities=10% Similarity=0.008 Sum_probs=42.1
Q ss_pred HHHHHHHHHcCCCeeeec-c-ccc----------hHHHhhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec
Q psy2895 154 NHVLKIFKQALPDVLNHN-I-ETV----------PRLYKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL 215 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~-l-ess----------~~~~~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~ 215 (293)
.+.|..|++.|++.|.++ + ++. ..-|..+.+. .+.+++.+.++.+|+. ||.|-.++++.+
T Consensus 151 ~~~Ldyl~~LGv~aI~l~Pi~~~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~--Gi~VilD~V~NH 223 (601)
T 3edf_A 151 IDHLDYIAGLGFTQLWPTPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKR--GMGLIQDVVLSH 223 (601)
T ss_dssp HHTHHHHHHTTCCEEEESCCEECCCSSSGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHT--TCEEEEEECCSB
T ss_pred HHHHHHHHHcCCCEEEECccccCCCCCCCCCCcCccccccccccCCCHHHHHHHHHHHHHc--CCEEEEEECCcc
Confidence 455667777777776652 2 210 1123345554 3899999999999999 999999999987
No 287
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=58.88 E-value=41 Score=27.58 Aligned_cols=132 Identities=16% Similarity=0.131 Sum_probs=65.0
Q ss_pred HHHHHHHHCCCcEEEEeeecCCCCCCCChhHHH----HHHHHHHhhCCCcE-EEEEc-C-CCcCcHHHHHHHHHHcCCCe
Q psy2895 95 KIAYTINKLKLNYVVITSVNRDDLHDGGSSHFV----SCIKHIRKLSTKIK-IEILI-P-DFRNQINHVLKIFKQALPDV 167 (293)
Q Consensus 95 ~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~----~ll~~i~~~~~~~~-i~~~~-~-~~~~~~~e~l~~l~~aG~~~ 167 (293)
+.++++.+.|. +|-.-+-.++.+...+.+.+. ...+.|.+.. +.. ...+. | +..+ ...++.++++|...
T Consensus 86 ~~~~~~~~~Gh-eIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~-G~~~~~~fr~P~G~~~--~~~~~~l~~~G~~~ 161 (240)
T 1ny1_A 86 QLIKRMSDEGH-IIGNHSFHHPDLTTKTADQIQDELDSVNEEVYKIT-GKQDNLYLRPPRGVFS--EYVLKETKRLGYQT 161 (240)
T ss_dssp HHHHHHHHTTC-EEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHH-SCCCCCEECCGGGEEC--HHHHHHHHHTTCEE
T ss_pred HHHHHHHHCcC-ChhcCCccccccccCCHHHHHHHHHHHHHHHHHHh-CCCCCcEEeCCCCCCC--HHHHHHHHHcCCEE
Confidence 34556666673 444444444333222222222 2223333332 222 34444 4 4444 67788888888776
Q ss_pred eeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec---CCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 168 LNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL---GENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 168 i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~---gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
+.-++++.+-... ...+.+.+.+.+. ....||- +|+-+ ..|.+.+...+..+++-|..++++.
T Consensus 162 v~w~~d~~Dw~~~---~~~~~~~~~~~v~--~~~~~g~-----Iil~Hd~~~~t~~aL~~ii~~l~~~Gy~fvtl~ 227 (240)
T 1ny1_A 162 VFWSVAFVDWKIN---NQKGKKYAYDHMI--KQAHPGA-----IYLLHTVSRDNAEALDDAITDLKKQGYTFKSID 227 (240)
T ss_dssp BCCSBCCSCCCGG---GCCCHHHHHHHHH--HTCCTTE-----EEEECSCSTTHHHHHHHHHHHHHHHTCEEECHH
T ss_pred EECcccccccCCc---CCCCHHHHHHHHH--hCCCCCe-----EEEEcCCChhHHHHHHHHHHHHHHCCCEEEEhH
Confidence 6555554211110 1123444433322 1122342 33333 3577788888888888888877664
No 288
>1g5a_A Amylosucrase; glycosyltransferase, glycoside hydrolase, (beta-alpha)8 barrel; HET: EPE; 1.40A {Neisseria polysaccharea} SCOP: b.71.1.1 c.1.8.1 PDB: 1jg9_A* 1mw1_A* 1mw2_A* 1mw3_A* 3ueq_A* 1jgi_A* 1mvy_A* 1mw0_A* 1s46_A* 1zs2_A*
Probab=58.80 E-value=13 Score=35.70 Aligned_cols=63 Identities=10% Similarity=0.163 Sum_probs=47.0
Q ss_pred HHHHHHHHHcCCCeeeec-c-ccc---------hHHHhhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCC
Q psy2895 154 NHVLKIFKQALPDVLNHN-I-ETV---------PRLYKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GEN 218 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~-l-ess---------~~~~~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt 218 (293)
.+.|+.|++.|++.|.+. + ++. ..-|..+.+. .+.+++.+.++.+|+. ||.|-.++++.+ +..
T Consensus 116 ~~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~v~dy~~vdp~~Gt~~d~~~Lv~~ah~~--GI~VilD~V~NH~s~~ 191 (628)
T 1g5a_A 116 KDKIPYFQELGLTYLHLMPLFKCPEGKSDGGYAVSSYRDVNPALGTIGDLREVIAALHEA--GISAVVDFIFNHTSNE 191 (628)
T ss_dssp HTTHHHHHHHTCSEEEECCCBCCCSSCSTTTTSCSCSSSBCTTTCCHHHHHHHHHHHHHT--TCEEEEEECCSEEETT
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCCCCCCCCCcCCcccCCcCccCCCHHHHHHHHHHHHHC--CCEEEEEEecCccccc
Confidence 556788999999998763 2 221 1123345554 3899999999999999 999999999998 543
No 289
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=58.62 E-value=44 Score=28.72 Aligned_cols=82 Identities=7% Similarity=-0.019 Sum_probs=51.6
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeec--CCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcCCCcC-cHHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVN--RDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIPDFRN-QINHVLKIFK 161 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~--~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~~~~~-~~~e~l~~l~ 161 (293)
..++.+.+.+.++.+.+.|+..+++.|.. .+.+ +.+.-.++++.+.+.. ..+.|-+.+.+... +..+..+...
T Consensus 24 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~L---s~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~ 100 (309)
T 3fkr_A 24 GDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAI---TDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQ 100 (309)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGS---CHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccCcccC---CHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHH
Confidence 46889999999999999999988886644 3333 3455666777665542 23344443321111 1244556666
Q ss_pred HcCCCeeee
Q psy2895 162 QALPDVLNH 170 (293)
Q Consensus 162 ~aG~~~i~~ 170 (293)
++|+|.+.+
T Consensus 101 ~~Gadavlv 109 (309)
T 3fkr_A 101 QLGAAMVMA 109 (309)
T ss_dssp HTTCSEEEE
T ss_pred HcCCCEEEE
Confidence 789998754
No 290
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=58.60 E-value=1.2e+02 Score=28.47 Aligned_cols=137 Identities=12% Similarity=0.021 Sum_probs=78.8
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHc--C
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQA--L 164 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~a--G 164 (293)
..+.+++++.+++..+.|+.-|-+.-|..+ . ...+.+..++..|++.. ++.+.+-| .. .++++.--++ |
T Consensus 336 ~~~~~~a~~~A~~~v~~GAdiIDIgpg~~~-v--~~~ee~~rvv~~i~~~~-~vpisIDT---~~--~~v~eaal~~~~G 406 (566)
T 1q7z_A 336 KGNEEIVIKEAKTQVEKGAEVLDVNFGIES-Q--IDVRYVEKIVQTLPYVS-NVPLSLDI---QN--VDLTERALRAYPG 406 (566)
T ss_dssp TTCCHHHHHHHHHHHHTTCSEEEEECSSGG-G--SCHHHHHHHHHHHHHHT-CSCEEEEC---CC--HHHHHHHHHHCSS
T ss_pred cCCHHHHHHHHHHHHHCCCCEEEECCCCCC-C--CHHHHHHHHHHHHHhhC-CceEEEeC---CC--HHHHHHHHHhcCC
Confidence 357899999999999999998877633211 1 23566777777776643 44555533 22 5666665556 7
Q ss_pred CCeee-eccccc--hHHHhhc----------C-CC---CCHHH----HHHHHHHHHHhCCCce--eeEeEEe---ecCCC
Q psy2895 165 PDVLN-HNIETV--PRLYKKV----------R-PG---SDYKH----SLNLLKNFKKLYPNIL--TKSGIMV---GLGEN 218 (293)
Q Consensus 165 ~~~i~-~~less--~~~~~~i----------~-~~---~~~e~----~l~~i~~~~~~~pgi~--~~~~~iv---G~gEt 218 (293)
.+.++ ++.+.. +++.+.+ + ++ .++++ ..+.++.+.++ |+. +-.|-.+ |+|..
T Consensus 407 ~~iINdis~~~~~~~~~~~~~~~~g~~vV~m~~~~~~p~t~~~~~~~l~~~~~~a~~~--Gi~~~IilDPg~~~igfgk~ 484 (566)
T 1q7z_A 407 RSLFNSAKVDEEELEMKINLLKKYGGTLIVLLMGKDVPKSFEERKEYFEKALKILERH--DFSDRVIFDPGVLPLGAEGK 484 (566)
T ss_dssp CCEEEEEESCHHHHHHHHHHHHHHCCEEEEESCSSSCCCSHHHHHHHHHHHHHHHHHT--TCGGGEEEECCCCCTTTTCC
T ss_pred CCEEEECCcchhhHHHHHHHHHHhCCeEEEEeCCCCCcCCHHHHHHHHHHHHHHHHHC--CCCCcEEEeCCCCcccCcHH
Confidence 77664 333221 3333221 1 11 13333 33455667777 884 5555555 66554
Q ss_pred HHHHHHHHHHHHhCCC
Q psy2895 219 DEEILTVIHDMRNHNI 234 (293)
Q Consensus 219 ~ed~~~~l~~l~~l~~ 234 (293)
.-++.+.+..++++|.
T Consensus 485 ~~~~l~~~~~~~~~g~ 500 (566)
T 1q7z_A 485 PVEVLKTIEFISSKGF 500 (566)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCC
Confidence 4555666677777654
No 291
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=58.50 E-value=61 Score=26.54 Aligned_cols=48 Identities=19% Similarity=0.241 Sum_probs=31.2
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHH
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIR 134 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~ 134 (293)
..++++..+.++.+.+.|++.|.+|-=.++..+..+.+.+.+-++.++
T Consensus 20 ~~~~e~~~e~i~~A~~~Gi~~i~~TdH~~~~~~~~~~~~~~~~~~~l~ 67 (247)
T 2wje_A 20 PKSREESKALLAESYRQGVRTIVSTSHRRKGMFETPEEKIAENFLQVR 67 (247)
T ss_dssp CSSHHHHHHHHHHHHHTTEEEEECCCEEBTTTBCCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHH
Confidence 467899999999999999999988753322222223444444444444
No 292
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=58.41 E-value=32 Score=28.30 Aligned_cols=43 Identities=9% Similarity=0.079 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCC
Q psy2895 189 KHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNI 234 (293)
Q Consensus 189 e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~ 234 (293)
+.+.+.++.+++. |.+.- .+..|.....+.+.+..+.+++.|+
T Consensus 84 ~~~~~~i~~A~~l--Ga~~v-~~~~g~~~~~~~l~~l~~~a~~~Gv 126 (264)
T 1yx1_A 84 PELEPTLRRAEAC--GAGWL-KVSLGLLPEQPDLAALGRRLARHGL 126 (264)
T ss_dssp TTHHHHHHHHHHT--TCSEE-EEEEECCCSSCCHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHc--CCCEE-EEecCCCCcHHHHHHHHHHHHhcCC
Confidence 4455556666666 65321 1122321111134444555555555
No 293
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=58.32 E-value=16 Score=31.72 Aligned_cols=57 Identities=12% Similarity=0.051 Sum_probs=41.8
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCC-------CChhHHHHHHHHHHhhCCCcEEE
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHD-------GGSSHFVSCIKHIRKLSTKIKIE 143 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~-------~~~~~~~~ll~~i~~~~~~~~i~ 143 (293)
.++.+.+.++++++.++|++.|.|.|.-+..+.+ .+---+...++.||+.+|++.|-
T Consensus 62 r~sid~l~~~~~~~~~lGi~~v~LFgv~~~~~KD~~gs~A~~~~g~v~rair~iK~~~pdl~vi 125 (337)
T 1w5q_A 62 RLSIDQLLIEAEEWVALGIPALALFPVTPVEKKSLDAAEAYNPEGIAQRATRALRERFPELGII 125 (337)
T ss_dssp EEEHHHHHHHHHHHHHTTCCEEEEEECCCGGGCBSSCGGGGCTTSHHHHHHHHHHHHCTTSEEE
T ss_pred eeCHHHHHHHHHHHHHCCCCEEEEecCCCcccCCcccCccCCCCChHHHHHHHHHHHCCCeEEE
Confidence 3689999999999999999999988873211111 01124778899999999986443
No 294
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=58.24 E-value=17 Score=33.34 Aligned_cols=34 Identities=12% Similarity=0.075 Sum_probs=29.5
Q ss_pred cCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec-CC
Q psy2895 182 VRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GE 217 (293)
Q Consensus 182 i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gE 217 (293)
+.+. .+.++..+.++.+|+. ||.|-.++++.+ +.
T Consensus 73 idp~~Gt~~df~~lv~~aH~~--Gi~VilD~V~NH~~~ 108 (480)
T 1ud2_A 73 VRTKYGTKAQLERAIGSLKSN--DINVYGDVVMNHKMG 108 (480)
T ss_dssp SSCSSCCHHHHHHHHHHHHHT--TCEEEEEECCSEECC
T ss_pred cCCCCCCHHHHHHHHHHHHHC--CCEEEEEEccCcccc
Confidence 6654 4899999999999999 999999999988 53
No 295
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=58.18 E-value=46 Score=28.73 Aligned_cols=82 Identities=12% Similarity=0.038 Sum_probs=51.8
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeec--CCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcCCC-cCcHHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVN--RDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIPDF-RNQINHVLKIFK 161 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~--~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~~~-~~~~~e~l~~l~ 161 (293)
..++.+.+.+.++.+.+.|+..+++.|.. .+.+ +.+.-.++++.+.+.. ..+.|-+.+... ..+..+..+...
T Consensus 39 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~L---s~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~ 115 (314)
T 3qze_A 39 GRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATL---DVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAK 115 (314)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGC---CHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhC---CHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHH
Confidence 46899999999999999999999886644 3333 3455666776665542 223343333211 111245566677
Q ss_pred HcCCCeeee
Q psy2895 162 QALPDVLNH 170 (293)
Q Consensus 162 ~aG~~~i~~ 170 (293)
++|+|.+.+
T Consensus 116 ~~Gadavlv 124 (314)
T 3qze_A 116 SGGADACLL 124 (314)
T ss_dssp HTTCSEEEE
T ss_pred HcCCCEEEE
Confidence 789999764
No 296
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=58.17 E-value=36 Score=28.15 Aligned_cols=71 Identities=17% Similarity=0.178 Sum_probs=44.4
Q ss_pred HHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEc-CCCcCcHHHHHHHHHHcCCCeeeec
Q psy2895 93 PKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILI-PDFRNQINHVLKIFKQALPDVLNHN 171 (293)
Q Consensus 93 i~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~-~~~~~~~~e~l~~l~~aG~~~i~~~ 171 (293)
..+.++.+.+.|+..|++++...+.. ..+.+ .++++.+++.. .+-+.. .|..+ .+.+..+.++|++.+.++
T Consensus 158 ~~e~~~~~~~~G~~~i~~t~~~~~g~-~~g~~--~~~i~~l~~~~---~ipvia~GGI~~--~ed~~~~~~~Gadgv~vg 229 (266)
T 2w6r_A 158 LRDWVVEVEKRGAGEILLTSIDRDGT-KSGYD--TEMIRFVRPLT---TLPIIASGGAGK--MEHFLEAFLAGADAALAA 229 (266)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTT-CSCCC--HHHHHHHGGGC---CSCEEEESCCCS--HHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHHHcCCCEEEEEeecCCCC-cCCCC--HHHHHHHHHHc---CCCEEEeCCCCC--HHHHHHHHHcCCHHHHcc
Confidence 45556677788999999987543211 11111 35667777653 233333 36555 677777778999998876
No 297
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=58.11 E-value=49 Score=27.15 Aligned_cols=84 Identities=17% Similarity=0.093 Sum_probs=47.5
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCe
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDV 167 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~ 167 (293)
.|..+.+. +.+.|+..|.---|.-++....+.+.+.++.+.++....... +....+.+ ...+.....+|+|.
T Consensus 113 fS~~QA~~----Aa~AGa~yISPfvgRi~d~g~dG~~~v~~i~~~~~~~~~~T~--IlaAS~Rn--~~~v~~aa~~G~d~ 184 (223)
T 3s1x_A 113 FNPIQALL----AAKAGVTYVSPFVGRLDDIGEDGMQIIDMIRTIFNNYIIKTQ--ILVASIRN--PIHVLRSAVIGADV 184 (223)
T ss_dssp CSHHHHHH----HHHTTCSEEEEBSHHHHHTTSCTHHHHHHHHHHHHHTTCCSE--EEEBSCCS--HHHHHHHHHHTCSE
T ss_pred CCHHHHHH----HHHcCCeEEEeecchHhhcCCCHHHHHHHHHHHHHHcCCCCE--EEEEeCCC--HHHHHHHHHcCCCE
Confidence 45555543 234577776443333223323345667777777776544433 43333444 44455545689999
Q ss_pred eeeccccchHHHhhcC
Q psy2895 168 LNHNIETVPRLYKKVR 183 (293)
Q Consensus 168 i~~~less~~~~~~i~ 183 (293)
+.++ +++++++-
T Consensus 185 ~Tip----~~vl~~l~ 196 (223)
T 3s1x_A 185 VTVP----FNVLKSLM 196 (223)
T ss_dssp EEEC----HHHHHHTT
T ss_pred EEeC----HHHHHHHH
Confidence 8887 56777765
No 298
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=57.87 E-value=49 Score=28.14 Aligned_cols=84 Identities=14% Similarity=0.034 Sum_probs=49.8
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcCCC-cCcHHHHHHHHHHc
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIPDF-RNQINHVLKIFKQA 163 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~~~-~~~~~e~l~~l~~a 163 (293)
..++.+.+.+.++.+.+.|+..+++.|.... .+..+.+.-.++++.+.+.. ..+.+-+.+... ..+..+..+...++
T Consensus 17 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE-~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~ 95 (291)
T 3tak_A 17 GGVDWKSLEKLVEWHIEQGTNSIVAVGTTGE-ASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDL 95 (291)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSTTTT-GGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccc-cccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhc
Confidence 4688899999999998889998887665431 11223455666776665542 223333333211 11124455566677
Q ss_pred CCCeeee
Q psy2895 164 LPDVLNH 170 (293)
Q Consensus 164 G~~~i~~ 170 (293)
|+|.+.+
T Consensus 96 Gadavlv 102 (291)
T 3tak_A 96 GADAALL 102 (291)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9888754
No 299
>3zss_A Putative glucanohydrolase PEP1A; alpha-glucan biosynthesis, glycoside hydrolase FA; 1.80A {Streptomyces coelicolor} PDB: 3zst_A* 3zt5_A* 3zt6_A* 3zt7_A*
Probab=57.77 E-value=13 Score=36.18 Aligned_cols=60 Identities=13% Similarity=0.094 Sum_probs=45.4
Q ss_pred HHHHHHHHHcCCCeeeec-c-cc-ch-H-----------------H--------HhhcCCC-CCHHHHHHHHHHHHHhCC
Q psy2895 154 NHVLKIFKQALPDVLNHN-I-ET-VP-R-----------------L--------YKKVRPG-SDYKHSLNLLKNFKKLYP 203 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~-l-es-s~-~-----------------~--------~~~i~~~-~~~e~~l~~i~~~~~~~p 203 (293)
.+.|..|++.|++.|.+. + ++ +. + . |..+.+. .+.+++.+.++.+++.
T Consensus 256 ~~~LdyLk~LGvt~I~L~Pi~~~~~~~~~g~~n~~~~~~~d~GspY~i~d~~~~y~~idp~~Gt~edfk~LV~~aH~~-- 333 (695)
T 3zss_A 256 ARRLPAIAAMGFDVVYLPPIHPIGTTHRKGRNNTLSATGDDVGVPWAIGSPEGGHDSIHPALGTLDDFDHFVTEAGKL-- 333 (695)
T ss_dssp GGGHHHHHHTTCCEEEECCCSCBCCTTCCCGGGCSSCCTTCCCCTTSBCBTTBCTTSCCTTTCCHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHhCCCCEEEECCcccCCccccccccccccccccCCCCcccccCCCCCccccCcccCCHHHHHHHHHHHHHC--
Confidence 567899999999999873 3 22 11 0 0 4566654 3889999999999999
Q ss_pred CceeeEeEEeec
Q psy2895 204 NILTKSGIMVGL 215 (293)
Q Consensus 204 gi~~~~~~ivG~ 215 (293)
||.|-.++++..
T Consensus 334 GI~VilD~V~Nh 345 (695)
T 3zss_A 334 GLEIALDFALQC 345 (695)
T ss_dssp TCEEEEEECCEE
T ss_pred CCEEEEEeeccC
Confidence 999999988753
No 300
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=57.71 E-value=8.4 Score=37.40 Aligned_cols=70 Identities=10% Similarity=0.057 Sum_probs=50.7
Q ss_pred HHHHHHHHHcCCCeeeec-c-cc-c-----hHHHhhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHH
Q psy2895 154 NHVLKIFKQALPDVLNHN-I-ET-V-----PRLYKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEIL 223 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~-l-es-s-----~~~~~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~ 223 (293)
.+.|..|++.|++.|.++ + ++ + ..-|..+.+. .+.++..+.++.||+. ||.|-.++++.+ +..-.-+.
T Consensus 268 ~~kLdyLk~LGvt~IwL~Pi~~s~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~--GikVilD~V~NHts~~~~~f~ 345 (696)
T 4aee_A 268 MKHIDHLEDLGVETIYLTPIFSSTSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSR--KIKIVLDITMHHTNPCNELFV 345 (696)
T ss_dssp HTTHHHHHHHTCCEEEECCCEEESSSSCCSEEEEEEECGGGCCHHHHHHHHHHHHHT--TCEEEEEECSSEECTTSHHHH
T ss_pred HHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHC--CCEEEEeccccccCccCHHHH
Confidence 567889999999998763 2 33 1 1223345543 3899999999999999 999999999998 65444444
Q ss_pred HH
Q psy2895 224 TV 225 (293)
Q Consensus 224 ~~ 225 (293)
+.
T Consensus 346 ~~ 347 (696)
T 4aee_A 346 KA 347 (696)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 301
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=57.71 E-value=94 Score=27.56 Aligned_cols=78 Identities=4% Similarity=-0.010 Sum_probs=52.1
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhh-CCCcEEEEEcC-CCcC-cHHHHHHHHHHcC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKL-STKIKIEILIP-DFRN-QINHVLKIFKQAL 164 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~-~~~~~i~~~~~-~~~~-~~~e~l~~l~~aG 164 (293)
.++++..+.++.+.+.|++.+-+-.|.+ +.+.-.+.++.+++. .+++.+.+=.+ ++.. +..+.++.|.+.|
T Consensus 174 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~------~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~~ai~~~~~l~~~~ 247 (398)
T 2pp0_A 174 TPLDQVLKNVVISRENGIGGIKLKVGQP------NCAEDIRRLTAVREALGDEFPLMVDANQQWDRETAIRMGRKMEQFN 247 (398)
T ss_dssp SCHHHHHHHHHHHHHTTCSCEEEECCCS------CHHHHHHHHHHHHHHHCSSSCEEEECTTCSCHHHHHHHHHHHGGGT
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEecCCC------CHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHHcC
Confidence 4789999999999999999887765542 135567888888886 46666766444 3321 1134566677778
Q ss_pred CCeeeec
Q psy2895 165 PDVLNHN 171 (293)
Q Consensus 165 ~~~i~~~ 171 (293)
++.+.-+
T Consensus 248 i~~iEqP 254 (398)
T 2pp0_A 248 LIWIEEP 254 (398)
T ss_dssp CSCEECC
T ss_pred CceeeCC
Confidence 8766533
No 302
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=57.70 E-value=79 Score=28.02 Aligned_cols=78 Identities=9% Similarity=0.132 Sum_probs=52.3
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhh-CCCcEEEEEcC-CCcC-cHHHHHHHHHHcC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKL-STKIKIEILIP-DFRN-QINHVLKIFKQAL 164 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~-~~~~~i~~~~~-~~~~-~~~e~l~~l~~aG 164 (293)
.+++++.+.++.+.+.|++.+-+-.|.. .+.-.+.++.+++. .+++.+.+=.+ ++.. +..+.++.|.+.|
T Consensus 144 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~-------~~~~~e~v~avR~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~ 216 (397)
T 2qde_A 144 GEPEAVAEEALAVLREGFHFVKLKAGGP-------LKADIAMVAEVRRAVGDDVDLFIDINGAWTYDQALTTIRALEKYN 216 (397)
T ss_dssp SCHHHHHHHHHHHHHHTCSCEEEECCSC-------HHHHHHHHHHHHHHHCTTSCEEEECTTCCCHHHHHHHHHHHGGGC
T ss_pred CCHHHHHHHHHHHHHhhhhheeecccCC-------HHHHHHHHHHHHHhhCCCCEEEEECCCCCCHHHHHHHHHHHHhCC
Confidence 3688899999988888999887765531 34556888888876 46677766444 3321 1134666777788
Q ss_pred CCeeeecc
Q psy2895 165 PDVLNHNI 172 (293)
Q Consensus 165 ~~~i~~~l 172 (293)
++.+.-++
T Consensus 217 i~~iEqP~ 224 (397)
T 2qde_A 217 LSKIEQPL 224 (397)
T ss_dssp CSCEECCS
T ss_pred CCEEECCC
Confidence 88775443
No 303
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=57.35 E-value=27 Score=31.13 Aligned_cols=137 Identities=16% Similarity=0.097 Sum_probs=76.7
Q ss_pred CCCCChhHHH-HH-------HHHHH-HCCCcEEEEeeecC--------CCC--C-----CC-C----hhHHHHHHHHHHh
Q psy2895 85 PDPLDIEEPK-KI-------AYTIN-KLKLNYVVITSVNR--------DDL--H-----DG-G----SSHFVSCIKHIRK 135 (293)
Q Consensus 85 ~~~~~~eei~-~~-------~~~~~-~~G~~~i~l~gg~~--------~~l--~-----~~-~----~~~~~~ll~~i~~ 135 (293)
++.++.+||. +. ++.+. +.|++.|-|.++.. |.. . .. + ...+.++++.+++
T Consensus 160 pr~lt~~eI~~~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~ 239 (379)
T 3aty_A 160 PEELTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCD 239 (379)
T ss_dssp CEECCHHHHHHTHHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHH
T ss_pred CccCCHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHH
Confidence 4568888888 54 44445 67999998887751 110 0 11 2 2357788888887
Q ss_pred hCC-C-cEEEEEcCCC----c-----CcHHHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCC
Q psy2895 136 LST-K-IKIEILIPDF----R-----NQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPN 204 (293)
Q Consensus 136 ~~~-~-~~i~~~~~~~----~-----~~~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pg 204 (293)
..+ + +.+++...+. . .+..+.++.|.++|++.++++.-+.+. +.... + ++.+++.. +
T Consensus 240 avg~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~------~~~~~----~-~~~ir~~~-~ 307 (379)
T 3aty_A 240 AVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVN------QQIGD----V-VAWVRGSY-S 307 (379)
T ss_dssp HHCGGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTS------CCCCC----H-HHHHHTTC-C
T ss_pred hcCCCeEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCC------CCccH----H-HHHHHHHC-C
Confidence 643 2 5566543221 1 112467788888999999886422110 12221 4 56666653 2
Q ss_pred ceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 205 ILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 205 i~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
+++ +..| |=|.++..+. +++=+.|.|.+.
T Consensus 308 iPv---i~~G-~it~~~a~~~---l~~g~aD~V~ig 336 (379)
T 3aty_A 308 GVK---ISNL-RYDFEEADQQ---IREGKVDAVAFG 336 (379)
T ss_dssp SCE---EEES-SCCHHHHHHH---HHTTSCSEEEES
T ss_pred CcE---EEEC-CCCHHHHHHH---HHcCCCeEEEec
Confidence 322 2222 3366665444 344458988875
No 304
>3czg_A Sucrose hydrolase; (alpha/beta)8-barrel; HET: GLC; 1.80A {Xanthomonas axonopodis PV} PDB: 3cze_A* 3czl_A* 3czk_A* 2wpg_A
Probab=57.34 E-value=14 Score=35.56 Aligned_cols=63 Identities=10% Similarity=0.132 Sum_probs=47.0
Q ss_pred HHHHHHHHHcCCCeeeec-c-ccc---------hHHHhhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCC
Q psy2895 154 NHVLKIFKQALPDVLNHN-I-ETV---------PRLYKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GEN 218 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~-l-ess---------~~~~~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt 218 (293)
.+.|..|++.|++.|.+. + ++. ..-|..+.+. .+.+++.+.++.+|+. ||.|-.++++.+ +..
T Consensus 109 ~~~LdyL~~LGv~~I~L~Pi~~~~~~~~~~GY~~~dy~~vdp~~Gt~~df~~Lv~~aH~~--GI~VilD~V~NH~s~~ 184 (644)
T 3czg_A 109 AERVPYLQELGVRYLHLLPFLRARAGDNDGGFAVSDYGQVEPSLGSNDDLVALTSRLREA--GISLCADFVLNHTADD 184 (644)
T ss_dssp HHTHHHHHHHTCCEEEECCCBCBCSSCCTTTTSBSCTTSBCGGGCCHHHHHHHHHHHHHT--TCEEEEEECCSEEETT
T ss_pred HHHHHHHHHcCCCEEEeCCCCcCCCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHC--CCEEEEEEecCCcccc
Confidence 567789999999998763 2 211 1223345543 3899999999999999 999999999988 443
No 305
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=57.31 E-value=67 Score=27.26 Aligned_cols=82 Identities=9% Similarity=0.026 Sum_probs=51.5
Q ss_pred CCCChhHHHHHHHHHHH-CCCcEEEEeeec--CCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcCCCcC-cHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINK-LKLNYVVITSVN--RDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIPDFRN-QINHVLKIF 160 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~-~G~~~i~l~gg~--~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~~~~~-~~~e~l~~l 160 (293)
..++.+.+.+.++.+.+ .|+..+++.|.. ...+ +.+.-.++++.+.+.. ..+.+-+.+.+... +..+..+..
T Consensus 19 g~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~L---s~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a 95 (293)
T 1f6k_A 19 GTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFML---STEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYA 95 (293)
T ss_dssp SCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGS---CHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhC---CHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHH
Confidence 46899999999999999 999998886644 3333 3456667777666542 23344333322111 113455556
Q ss_pred HHcCCCeeee
Q psy2895 161 KQALPDVLNH 170 (293)
Q Consensus 161 ~~aG~~~i~~ 170 (293)
.++|+|.+.+
T Consensus 96 ~~~Gadavlv 105 (293)
T 1f6k_A 96 TELGYDCLSA 105 (293)
T ss_dssp HHHTCSEEEE
T ss_pred HhcCCCEEEE
Confidence 6689998754
No 306
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=57.25 E-value=58 Score=28.67 Aligned_cols=81 Identities=9% Similarity=-0.013 Sum_probs=51.8
Q ss_pred HHHHHHHH---HcCCCeeeecccc-chHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHH
Q psy2895 154 NHVLKIFK---QALPDVLNHNIET-VPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDM 229 (293)
Q Consensus 154 ~e~l~~l~---~aG~~~i~~~les-s~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l 229 (293)
.+.++.+. ++|+|.+.+++-+ ...-... -..+++...+.++.+++.. .+++.+-+-. +-+.+++.+.++.+
T Consensus 142 ~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~--l~~~~e~~~~il~av~~~~-~~PV~vKi~p--~~d~~~~~~~a~~~ 216 (354)
T 4ef8_A 142 VEMCKRLAAVATEKGVILELNLSCPNVPGKPQ--VAYDFDAMRQCLTAVSEVY-PHSFGVKMPP--YFDFAHFDAAAEIL 216 (354)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECSSCCSTTSCC--GGGSHHHHHHHHHHHHHHC-CSCEEEEECC--CCSHHHHHHHHHHH
T ss_pred HHHHHHHhhhhhcCCCEEEEeCCCCCCCCchh--hccCHHHHHHHHHHHHHhh-CCCeEEEecC--CCCHHHHHHHHHHH
Confidence 34555555 5689999888754 2211111 1236788888888888863 3444333333 45788888888888
Q ss_pred HhCC-CCEEEe
Q psy2895 230 RNHN-IDILTI 239 (293)
Q Consensus 230 ~~l~-~~~i~i 239 (293)
.+.+ ++.+.+
T Consensus 217 ~~~Gg~d~I~~ 227 (354)
T 4ef8_A 217 NEFPKVQFITC 227 (354)
T ss_dssp HTCTTEEEEEE
T ss_pred HhCCCccEEEE
Confidence 8998 888765
No 307
>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate ESTE; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3
Probab=57.12 E-value=42 Score=27.81 Aligned_cols=139 Identities=12% Similarity=0.054 Sum_probs=65.2
Q ss_pred HHHHHHHHCCCcEEEEeeecCCCCCCCChhHHH----HHHHHHHhhCCCcEEEEEc-C-CCcCcHHHHHHHHHHcCCCee
Q psy2895 95 KIAYTINKLKLNYVVITSVNRDDLHDGGSSHFV----SCIKHIRKLSTKIKIEILI-P-DFRNQINHVLKIFKQALPDVL 168 (293)
Q Consensus 95 ~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~----~ll~~i~~~~~~~~i~~~~-~-~~~~~~~e~l~~l~~aG~~~i 168 (293)
+.++++.+.|. +|-.-+-..+.+...+.+.+. ..-+.|.+.. +.....+. | +..+ +..++.+++.|...+
T Consensus 89 ~~lr~i~~~Gh-eIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~-G~~~~~fr~P~G~~~--~~~~~~l~~~G~~~v 164 (254)
T 2iw0_A 89 DTIRRMRADGH-LVGSHTYAHPDLNTLSSADRISQMRQLEEATRRID-GFAPKYMRAPYLSCD--AGCQGDLGGLGYHII 164 (254)
T ss_dssp HHHHHHHHTTC-EEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHH-SCEESEECCGGGCCC--HHHHHHHHHTTCEEE
T ss_pred HHHHHHHHCCC-EEEeeccCCCCcccCCHHHHHHHHHHHHHHHHHHh-CCCCCEEECCCCCCC--HHHHHHHHHcCCeEE
Confidence 44556666773 444444444333222222222 2223333322 23455554 4 4444 678888888888766
Q ss_pred eeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCce-eeEeEEeec-C--CCHHH-HHHHHHHHHhCCCCEEEeecCC
Q psy2895 169 NHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNIL-TKSGIMVGL-G--ENDEE-ILTVIHDMRNHNIDILTIGQYL 243 (293)
Q Consensus 169 ~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~-~~~~~ivG~-g--Et~ed-~~~~l~~l~~l~~~~i~i~~~~ 243 (293)
..++++.+-.. .........++.++.+.+ ... -...+|+-+ + .|.+. +...++.+++-|..++++.+.+
T Consensus 165 ~w~~d~~Dw~~---~~~~~i~~~~~~~~~~~~---~~~~~~g~IiL~Hd~~~~t~~~~l~~ii~~lk~~Gy~fvtl~ell 238 (254)
T 2iw0_A 165 DTNLDTKDYEN---NKPETTHLSAEKFNNELS---ADVGANSYIVLSHDVHEQTVVSLTQKLIDTLKSKGYRAVTVGECL 238 (254)
T ss_dssp CCSEECCTTTS---CSTTTHHHHHHHHHHHSC---SCGGGCCEEEEECTTSHHHHHTHHHHHHHHHHHTTCEECCHHHHT
T ss_pred EeCCCCcccCc---CChHHHHHHHHHHHHHHh---hcCCCCCEEEEEcCCCcccHHHHHHHHHHHHHHCCCEEEEHHHhh
Confidence 55655522111 111122222233322211 110 012234444 2 34443 5678888888888887775443
No 308
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=57.12 E-value=36 Score=29.13 Aligned_cols=84 Identities=12% Similarity=0.045 Sum_probs=50.9
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCC--CcEEEEEcCCC-cCcHHHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLST--KIKIEILIPDF-RNQINHVLKIFKQ 162 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~--~~~i~~~~~~~-~~~~~e~l~~l~~ 162 (293)
..++.+.+.+.++.+.+.|+..+++.|.... .+..+.+.-.++++.+.+... .+.+-+.+.+. ..+..+..+...+
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~gl~v~GttGE-~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~ 101 (301)
T 3m5v_A 23 GKVDEQSYARLIKRQIENGIDAVVPVGTTGE-SATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKE 101 (301)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEECSSTTTT-GGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECccccC-hhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHH
Confidence 3588899999999999999999887664431 112234566677776665432 23443333211 1112445556667
Q ss_pred cCCCeeee
Q psy2895 163 ALPDVLNH 170 (293)
Q Consensus 163 aG~~~i~~ 170 (293)
+|+|.+.+
T Consensus 102 ~Gadavlv 109 (301)
T 3m5v_A 102 HGADGILS 109 (301)
T ss_dssp TTCSEEEE
T ss_pred cCCCEEEE
Confidence 89998754
No 309
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=56.83 E-value=54 Score=28.12 Aligned_cols=82 Identities=11% Similarity=-0.017 Sum_probs=52.5
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeec--CCCCCCCChhHHHHHHHHHHhhCC-CcEEEEEcCCCcC-cHHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVN--RDDLHDGGSSHFVSCIKHIRKLST-KIKIEILIPDFRN-QINHVLKIFK 161 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~--~~~l~~~~~~~~~~ll~~i~~~~~-~~~i~~~~~~~~~-~~~e~l~~l~ 161 (293)
..++.+.+.+.++.+.+.|+..+++.|.. .+.+ +.+.-.++++.+.+... .+.+-+.+..... +..+..+..+
T Consensus 30 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~L---s~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~ 106 (307)
T 3s5o_A 30 AEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFL---TSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMA 106 (307)
T ss_dssp SCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGS---CHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhC---CHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHH
Confidence 46889999999999999999998887654 3333 35666777877766532 3333333321111 1134556667
Q ss_pred HcCCCeeee
Q psy2895 162 QALPDVLNH 170 (293)
Q Consensus 162 ~aG~~~i~~ 170 (293)
++|+|.+.+
T Consensus 107 ~~Gadavlv 115 (307)
T 3s5o_A 107 QVGADAAMV 115 (307)
T ss_dssp HTTCSEEEE
T ss_pred HcCCCEEEE
Confidence 789998765
No 310
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=56.81 E-value=1e+02 Score=27.00 Aligned_cols=76 Identities=9% Similarity=-0.022 Sum_probs=47.0
Q ss_pred CChhHHHHHHHHHHHC-CCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcC-CCcC-cHHHHHHHHHHc
Q psy2895 88 LDIEEPKKIAYTINKL-KLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIP-DFRN-QINHVLKIFKQA 163 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~-G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~-~~~~-~~~e~l~~l~~a 163 (293)
.+++++.+.++++.+. |++.+-+--|..+ ...=.+.++.+++.. |++.+.+=.+ ++.. +..+.++.|.+.
T Consensus 138 ~~~~~~~~~a~~~~~~~G~~~~K~K~g~~~------~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~ 211 (367)
T 3dg3_A 138 DDPVKMVAEAERIRETYGINTFKVKVGRRP------VQLDTAVVRALRERFGDAIELYVDGNRGWSAAESLRAMREMADL 211 (367)
T ss_dssp SCHHHHHHHHHHHHHHHCCCEEEEECCCSS------THHHHHHHHHHHHHHGGGSEEEEECTTCSCHHHHHHHHHHTTTS
T ss_pred CCHHHHHHHHHHHHHhcCccEEEEeeCCCh------hhhHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 4689999999999888 9998877544321 113346778887764 5667766444 3322 012344555556
Q ss_pred CCCeee
Q psy2895 164 LPDVLN 169 (293)
Q Consensus 164 G~~~i~ 169 (293)
|+..+.
T Consensus 212 ~i~~iE 217 (367)
T 3dg3_A 212 DLLFAE 217 (367)
T ss_dssp CCSCEE
T ss_pred CCCEEE
Confidence 666654
No 311
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=56.67 E-value=48 Score=28.19 Aligned_cols=82 Identities=11% Similarity=0.011 Sum_probs=50.9
Q ss_pred CCCCChhHHHHHHHHHHHCCCcEEEEeeec--CCCCCCCChhHHHHHHHHHHhhCC-CcEEEEEcCCCc-CcHHHHHHHH
Q psy2895 85 PDPLDIEEPKKIAYTINKLKLNYVVITSVN--RDDLHDGGSSHFVSCIKHIRKLST-KIKIEILIPDFR-NQINHVLKIF 160 (293)
Q Consensus 85 ~~~~~~eei~~~~~~~~~~G~~~i~l~gg~--~~~l~~~~~~~~~~ll~~i~~~~~-~~~i~~~~~~~~-~~~~e~l~~l 160 (293)
.. ++.+.+.+.++.+.+.|+..+++.|.. .+.+ +.+.-.++++.+.+... .+.+-+.+.+.. .+..+..+..
T Consensus 17 dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~L---s~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a 92 (291)
T 3a5f_A 17 TG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTM---TETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWA 92 (291)
T ss_dssp SS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGS---CHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHH
T ss_pred CC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhC---CHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHH
Confidence 35 899999999999999999998887643 3333 34556667776655422 233433332111 1124455566
Q ss_pred HHcCCCeeee
Q psy2895 161 KQALPDVLNH 170 (293)
Q Consensus 161 ~~aG~~~i~~ 170 (293)
+++|+|.+.+
T Consensus 93 ~~~Gadavlv 102 (291)
T 3a5f_A 93 ESIGVDGLLV 102 (291)
T ss_dssp HHTTCSEEEE
T ss_pred HhcCCCEEEE
Confidence 6789998754
No 312
>2ze0_A Alpha-glucosidase; TIM barrel, glucoside hydrolase, extremophIle, hydrolase; 2.00A {Geobacillus SP}
Probab=56.59 E-value=16 Score=34.26 Aligned_cols=69 Identities=9% Similarity=0.045 Sum_probs=45.3
Q ss_pred HHHHHHHHHcCCCeeeec-c-cc-c-h-----HHHhhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHH
Q psy2895 154 NHVLKIFKQALPDVLNHN-I-ET-V-P-----RLYKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEI 222 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~-l-es-s-~-----~~~~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~ 222 (293)
.+.|..|++.|++.|.++ + ++ . + .-|..+.+. .+.++..+.++.+|+. ||.|-.++++.+ +..-.-+
T Consensus 34 ~~~ldyl~~lGv~~i~l~Pi~~~~~~~~gY~~~dy~~id~~~Gt~~d~~~lv~~~h~~--Gi~vilD~V~NH~~~~~~~f 111 (555)
T 2ze0_A 34 IEKLDYLVELGVDIVWICPIYRSPNADNGYDISDYYAIMDEFGTMDDFDELLAQAHRR--GLKVILDLVINHTSDEHPWF 111 (555)
T ss_dssp HHTHHHHHHHTCCEEEECCCEECCCTTTTCSCSEEEEECGGGCCHHHHHHHHHHHHHT--TCEEEEEEECSBCCTTSHHH
T ss_pred HHHHHHHHHcCCCEEEeCCcccCCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHC--CCEEEEEEecccccchhhHH
Confidence 445667777777776652 2 22 1 1 112234443 3889999999999999 999999999998 5543334
Q ss_pred HH
Q psy2895 223 LT 224 (293)
Q Consensus 223 ~~ 224 (293)
.+
T Consensus 112 ~~ 113 (555)
T 2ze0_A 112 IE 113 (555)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 313
>3k8k_A Alpha-amylase, SUSG; alpha8/BETA8 barrel, CBM, beta-sandwich, membrane protein; 2.20A {Bacteroides thetaiotaomicron} PDB: 3k8m_A* 3k8l_A*
Probab=56.52 E-value=16 Score=35.27 Aligned_cols=71 Identities=15% Similarity=0.063 Sum_probs=48.4
Q ss_pred HHHHHHHHHcCCCeeeec-c-cc-c-----hHHHhhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHH
Q psy2895 154 NHVLKIFKQALPDVLNHN-I-ET-V-----PRLYKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEIL 223 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~-l-es-s-----~~~~~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~ 223 (293)
.+.|..|++.|++.|.++ + ++ + ..-|..+.+. .+.+++.+.++.+++. ||.+-.++++.+ +..-.-+.
T Consensus 63 ~~~l~yl~~lGv~~i~l~Pi~~~~~~~gY~~~dy~~i~~~~Gt~~d~~~lv~~~h~~--gi~vi~D~V~NH~~~~~~wf~ 140 (669)
T 3k8k_A 63 TQKLDYLNQLGVKALWLSPIHPCMSYHGYDVTDYTKVNPQLGTESDFDRLVTEAHNR--GIKIYLDYVMNHTGTAHPWFT 140 (669)
T ss_dssp HTTHHHHHTTTCSEEEECCCSSBSSTTCCSBSCTTSCCTTTCCHHHHHHHHHHHHHT--TCEEEEEECCSEEETTSHHHH
T ss_pred HHHHHHHHHcCCCEEEecccccCCCCCCCCcccccccccccCCHHHHHHHHHHHHHc--CCEEEEEECcccCCCcCHHHH
Confidence 455677777777777653 2 22 1 1223345544 3899999999999999 999999999998 55444444
Q ss_pred HHH
Q psy2895 224 TVI 226 (293)
Q Consensus 224 ~~l 226 (293)
+.+
T Consensus 141 ~~~ 143 (669)
T 3k8k_A 141 EAS 143 (669)
T ss_dssp HHH
T ss_pred HHh
Confidence 443
No 314
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=56.48 E-value=11 Score=34.53 Aligned_cols=33 Identities=3% Similarity=0.029 Sum_probs=28.7
Q ss_pred hcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec
Q psy2895 181 KVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL 215 (293)
Q Consensus 181 ~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~ 215 (293)
.+.+. .+.++..+.++.+|++ ||.|-.++++.+
T Consensus 89 ~idp~~Gt~~df~~lv~~~H~~--Gi~VilD~V~NH 122 (478)
T 2guy_A 89 SLNENYGTADDLKALSSALHER--GMYLMVDVVANH 122 (478)
T ss_dssp EECTTSCCHHHHHHHHHHHHHT--TCEEEEEECCSB
T ss_pred ccCccCCCHHHHHHHHHHHHHC--CCEEEEEECccc
Confidence 45554 3899999999999999 999999999987
No 315
>2zic_A Dextran glucosidase; TIM barrel, (beta/alpha)8-barrel, hydrolase; 2.20A {Streptococcus mutans} PDB: 2zid_A*
Probab=56.42 E-value=12 Score=34.93 Aligned_cols=69 Identities=12% Similarity=0.095 Sum_probs=45.1
Q ss_pred HHHHHHHHHcCCCeeeec-c-cc-c------hHHHhhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHH
Q psy2895 154 NHVLKIFKQALPDVLNHN-I-ET-V------PRLYKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEI 222 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~-l-es-s------~~~~~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~ 222 (293)
.+.|+.|++.|++.|.++ + ++ + ..-|..+.+. .+.++..+.++.+++. ||.|-.++++.+ +..-.-+
T Consensus 34 ~~~Ldyl~~LGv~~I~l~Pi~~~~~~~~GY~~~dy~~idp~~Gt~~df~~lv~~~h~~--Gi~VilD~V~NH~s~~~~~f 111 (543)
T 2zic_A 34 TSKLDYLQKLGVMAIWLSPVYDSPMDDNGYDIANYEAIADIFGNMADMDNLLTQAKMR--GIKIIMDLVVNHTSDEHAWF 111 (543)
T ss_dssp HHTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHTT--TCEEEEEECCSBCCTTSHHH
T ss_pred HHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHC--CCEEEEEEecCcccccchhh
Confidence 345566666777776552 2 22 1 1112234443 3899999999999999 999999999998 5443334
Q ss_pred HH
Q psy2895 223 LT 224 (293)
Q Consensus 223 ~~ 224 (293)
.+
T Consensus 112 ~~ 113 (543)
T 2zic_A 112 IE 113 (543)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 316
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=56.31 E-value=1e+02 Score=26.85 Aligned_cols=75 Identities=12% Similarity=0.085 Sum_probs=47.0
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcC-CCcCc-HHHHHHHHHHcC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIP-DFRNQ-INHVLKIFKQAL 164 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~-~~~~~-~~e~l~~l~~aG 164 (293)
-+++++.+.++++.+.|++.+-+--|.. .+.-.+.++.+++.. +++.+.+=.+ ++... ..+.++.|.+.|
T Consensus 138 ~~~~~~~~~a~~~~~~G~~~~K~K~g~~-------~~~d~~~v~avR~a~g~~~~l~vDan~~~~~~~a~~~~~~L~~~~ 210 (354)
T 3jva_A 138 DEPNVMAQKAVEKVKLGFDTLKIKVGTG-------IEADIARVKAIREAVGFDIKLRLDANQAWTPKDAVKAIQALADYQ 210 (354)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSC-------HHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHTTTSC
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEEeCCC-------HHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHhcC
Confidence 4789999999999999999887755432 134457788888764 6777766444 33220 123444454455
Q ss_pred CCeee
Q psy2895 165 PDVLN 169 (293)
Q Consensus 165 ~~~i~ 169 (293)
+..+.
T Consensus 211 i~~iE 215 (354)
T 3jva_A 211 IELVE 215 (354)
T ss_dssp EEEEE
T ss_pred CCEEE
Confidence 54443
No 317
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=56.24 E-value=43 Score=28.92 Aligned_cols=82 Identities=6% Similarity=0.033 Sum_probs=52.1
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeec--CCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcCCC-cCcHHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVN--RDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIPDF-RNQINHVLKIFK 161 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~--~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~~~-~~~~~e~l~~l~ 161 (293)
..++.+.+.+.++.+.+.|+..+++.|.. .+.+ +.+.-.++++.+.+.. ..+.|-+.+... ..+..+..+...
T Consensus 40 g~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~L---s~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~ 116 (315)
T 3na8_A 40 GGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYL---SDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAE 116 (315)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGS---CHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccChhhC---CHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHH
Confidence 46899999999999999999998887644 3333 3456667777665542 223333333211 111245556677
Q ss_pred HcCCCeeee
Q psy2895 162 QALPDVLNH 170 (293)
Q Consensus 162 ~aG~~~i~~ 170 (293)
++|+|.+.+
T Consensus 117 ~~Gadavlv 125 (315)
T 3na8_A 117 SLGAEAVMV 125 (315)
T ss_dssp HTTCSEEEE
T ss_pred hcCCCEEEE
Confidence 789999765
No 318
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=56.21 E-value=49 Score=29.25 Aligned_cols=86 Identities=8% Similarity=0.070 Sum_probs=50.3
Q ss_pred HHHHHHHHcCCCeeeecc-cc--chHHHhhc-C-C----CCCHHH----HHHHHHHHHHhCCCceeeEeE-----Eeec-
Q psy2895 155 HVLKIFKQALPDVLNHNI-ET--VPRLYKKV-R-P----GSDYKH----SLNLLKNFKKLYPNILTKSGI-----MVGL- 215 (293)
Q Consensus 155 e~l~~l~~aG~~~i~~~l-es--s~~~~~~i-~-~----~~~~e~----~l~~i~~~~~~~pgi~~~~~~-----ivG~- 215 (293)
+..++.+++|.|.|.+.. -+ ....+.-. + | +.+++. .+++++.++++.+.-.+..-+ .-|+
T Consensus 165 ~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~ 244 (361)
T 3gka_A 165 RGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMG 244 (361)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCC
T ss_pred HHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCC
Confidence 445566778999998743 22 13333322 1 1 335554 456777777764311222111 1122
Q ss_pred -CCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 216 -GENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 216 -gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
+++.++..+.++.+.+.|++.+.+.
T Consensus 245 ~~~~~~~~~~la~~l~~~Gvd~i~v~ 270 (361)
T 3gka_A 245 DSDPAATFGHVARELGRRRIAFLFAR 270 (361)
T ss_dssp CSCHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEC
Confidence 2346788899999999999999886
No 319
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=56.17 E-value=41 Score=27.51 Aligned_cols=97 Identities=15% Similarity=0.104 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEc-CCCcCcHHHHHHHHHHcCCCeeee
Q psy2895 92 EPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILI-PDFRNQINHVLKIFKQALPDVLNH 170 (293)
Q Consensus 92 ei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~-~~~~~~~~e~l~~l~~aG~~~i~~ 170 (293)
...+.++.+.+.|+..|++++.+++ ....+. -.++++++++.. .+.+.. .|..+ .+.+..+.++|++.+.+
T Consensus 152 ~~~e~~~~~~~~G~~~i~~~~~~~~-g~~~g~--~~~~~~~l~~~~---~ipvia~GGI~~--~~d~~~~~~~Gadgv~v 223 (253)
T 1thf_D 152 LLRDWVVEVEKRGAGEILLTSIDRD-GTKSGY--DTEMIRFVRPLT---TLPIIASGGAGK--MEHFLEAFLAGADAALA 223 (253)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTT-TSCSCC--CHHHHHHHGGGC---CSCEEEESCCCS--HHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHCCCCEEEEEeccCC-CCCCCC--CHHHHHHHHHhc---CCCEEEECCCCC--HHHHHHHHHcCChHHHH
Confidence 3556667777889999998876532 111111 135667776643 233333 35555 67778888899999887
Q ss_pred ccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceee
Q psy2895 171 NIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTK 208 (293)
Q Consensus 171 ~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~ 208 (293)
+ ..+++ ...++++. ++.+++. |+.+.
T Consensus 224 G----sal~~---~~~~~~~~---~~~l~~~--g~~~~ 249 (253)
T 1thf_D 224 A----SVFHF---REIDVREL---KEYLKKH--GVNVR 249 (253)
T ss_dssp S----HHHHT---TCSCHHHH---HHHHHHT--TCCCC
T ss_pred H----HHHHc---CCCCHHHH---HHHHHHc--CCccc
Confidence 6 23332 22355544 4456677 87654
No 320
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=56.11 E-value=1.1e+02 Score=27.26 Aligned_cols=86 Identities=8% Similarity=0.030 Sum_probs=52.8
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEee-------------ecC----CCCCCCC---hhHHHHHHHHHHhhC-CCcEEEEE
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITS-------------VNR----DDLHDGG---SSHFVSCIKHIRKLS-TKIKIEIL 145 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~g-------------g~~----~~l~~~~---~~~~~~ll~~i~~~~-~~~~i~~~ 145 (293)
..+++++.+.++++.+.|++.+-+-- |.. ++. +.+ .+...+.++.+++.. |++.+.+=
T Consensus 141 ~~~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~-~~~~~~~~~~~e~v~avR~avG~d~~l~vD 219 (409)
T 3go2_A 141 VTDLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPAL-NVDRKVLRNLRAHLEALRDGAGPDVEILLD 219 (409)
T ss_dssp CCSHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTC-CCCHHHHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCccc-ccchHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 45799999999999999999886642 210 111 111 234467788888764 67777764
Q ss_pred cC-CCcC-cHHHHHHHHHHcCCCeeeeccc
Q psy2895 146 IP-DFRN-QINHVLKIFKQALPDVLNHNIE 173 (293)
Q Consensus 146 ~~-~~~~-~~~e~l~~l~~aG~~~i~~~le 173 (293)
.+ ++.. +..+.++.|.+.|++.+..+.+
T Consensus 220 aN~~~~~~~A~~~~~~L~~~~i~~iE~P~~ 249 (409)
T 3go2_A 220 LNFNAKPEGYLKILRELADFDLFWVEIDSY 249 (409)
T ss_dssp CTTCSCHHHHHHHHHHTTTSCCSEEECCCS
T ss_pred CCCCCCHHHHHHHHHHHhhcCCeEEEeCcC
Confidence 44 3322 1123556666678888876543
No 321
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=56.00 E-value=52 Score=33.38 Aligned_cols=112 Identities=13% Similarity=0.096 Sum_probs=64.8
Q ss_pred hhHHHHHHHHHHhhCCCcEEEEEcC-C-CcCcHHHHHHHHHHcCCCeeeecccc-chHHHhhcCC--CCCHHHHHHHHHH
Q psy2895 123 SSHFVSCIKHIRKLSTKIKIEILIP-D-FRNQINHVLKIFKQALPDVLNHNIET-VPRLYKKVRP--GSDYKHSLNLLKN 197 (293)
Q Consensus 123 ~~~~~~ll~~i~~~~~~~~i~~~~~-~-~~~~~~e~l~~l~~aG~~~i~~~les-s~~~~~~i~~--~~~~e~~l~~i~~ 197 (293)
.+.+.+-++.+++..|+..+-+... + ...+..+.++.+.++|+|.+.+++-+ .....+.+.. ..+++...+.++.
T Consensus 618 ~~~~~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~ 697 (1025)
T 1gte_A 618 AAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRW 697 (1025)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHH
Confidence 4555555666676555433333211 1 11122556777778899999988754 2100111110 1367788888999
Q ss_pred HHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEe
Q psy2895 198 FKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTI 239 (293)
Q Consensus 198 ~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i 239 (293)
+++.. ++++ ++-+..+.+++.+..+.+.+.|++.+.+
T Consensus 698 v~~~~-~~Pv----~vK~~~~~~~~~~~a~~~~~~G~d~i~v 734 (1025)
T 1gte_A 698 VRQAV-QIPF----FAKLTPNVTDIVSIARAAKEGGADGVTA 734 (1025)
T ss_dssp HHHHC-SSCE----EEEECSCSSCHHHHHHHHHHHTCSEEEE
T ss_pred HHHhh-CCce----EEEeCCChHHHHHHHHHHHHcCCCEEEE
Confidence 88873 3443 3333223346778888889999999887
No 322
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=55.98 E-value=53 Score=30.15 Aligned_cols=68 Identities=16% Similarity=0.227 Sum_probs=49.8
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHN 233 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~ 233 (293)
.+.++.+.++|++.+.++.- ...+...++.++.+++..|++++ ++|-+-|.++. ..+.+.|
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~-----------~G~~~~~~e~i~~i~~~~p~~pv----i~g~~~t~e~a----~~l~~~G 299 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTA-----------HGHSRRVIETLEMIKADYPDLPV----VAGNVATPEGT----EALIKAG 299 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCS-----------CCSSHHHHHHHHHHHHHCTTSCE----EEEEECSHHHH----HHHHHTT
T ss_pred HHHHHHHHHhCCCEEEEEec-----------CCchHHHHHHHHHHHHHCCCceE----EeCCcCCHHHH----HHHHHcC
Confidence 67888899999999887531 11346678899999999877654 44556677765 5556799
Q ss_pred CCEEEee
Q psy2895 234 IDILTIG 240 (293)
Q Consensus 234 ~~~i~i~ 240 (293)
++.+.++
T Consensus 300 ~d~I~v~ 306 (494)
T 1vrd_A 300 ADAVKVG 306 (494)
T ss_dssp CSEEEEC
T ss_pred CCEEEEc
Confidence 9998874
No 323
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=55.94 E-value=1.1e+02 Score=27.23 Aligned_cols=120 Identities=7% Similarity=0.072 Sum_probs=64.1
Q ss_pred HHHHHHHhhCCCcEEEEEcC-CCcCcHHHHHHHHHHcCCCeeee--ccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCC
Q psy2895 128 SCIKHIRKLSTKIKIEILIP-DFRNQINHVLKIFKQALPDVLNH--NIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPN 204 (293)
Q Consensus 128 ~ll~~i~~~~~~~~i~~~~~-~~~~~~~e~l~~l~~aG~~~i~~--~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pg 204 (293)
.+|+++.+. +..|-+.+. ..+.++...++.+.+.|...+.+ ...+-+.-.+.++ |.+|..+++.+|+
T Consensus 149 pLL~~va~~--gKPViLStGmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~n--------L~aI~~Lk~~f~~ 218 (385)
T 1vli_A 149 PLLKYVARL--NRPMIFSTAGAEISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSN--------LSVIPMLAAAFPE 218 (385)
T ss_dssp HHHHHHHTT--CSCEEEECTTCCHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCC--------TTHHHHHHHHSTT
T ss_pred HHHHHHHhc--CCeEEEECCCCCHHHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcC--------HHHHHHHHHHcCC
Confidence 567777664 335656553 22333455677777778744432 3222122222222 5677888888777
Q ss_pred ceeeEeEEeec--CCCHHHHHHHHHHHHhCCCCEEEeecCCCCCCCc--cccccccChhHHHHHHHH
Q psy2895 205 ILTKSGIMVGL--GENDEEILTVIHDMRNHNIDILTIGQYLMPSRLH--LPVHRYLHPKFFEKFKKI 267 (293)
Q Consensus 205 i~~~~~~ivG~--gEt~ed~~~~l~~l~~l~~~~i~i~~~~~p~~~~--~a~~r~~~p~~~~~~~~~ 267 (293)
++| + .-++ |. .......-.+|.+.|-.+ +- |.... ..-..-+.|+++..+.+.
T Consensus 219 lpV--G-~SdHt~G~-----~~~~~AAvAlGA~iIEkH-ft-ldra~~G~D~~~SL~P~ef~~lv~~ 275 (385)
T 1vli_A 219 AVI--G-FSDHSEHP-----TEAPCAAVRLGAKLIEKH-FT-IDKNLPGADHSFALNPDELKEMVDG 275 (385)
T ss_dssp SEE--E-EEECCSSS-----SHHHHHHHHTTCSEEEEE-BC-SCTTSSCSSCTTSBCHHHHHHHHHH
T ss_pred CCE--E-eCCCCCCc-----hHHHHHHHHcCCCEEEeC-CC-ccccCCCCchhhhCCHHHHHHHHHH
Confidence 755 1 2444 33 344455568999988886 42 22111 111223578887655433
No 324
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=55.90 E-value=46 Score=28.66 Aligned_cols=84 Identities=8% Similarity=0.003 Sum_probs=60.4
Q ss_pred HHHHHHHcCCCeeeecccc-chHHHhhcCC-CCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCC
Q psy2895 156 VLKIFKQALPDVLNHNIET-VPRLYKKVRP-GSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHN 233 (293)
Q Consensus 156 ~l~~l~~aG~~~i~~~les-s~~~~~~i~~-~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~ 233 (293)
....+.++|++.+.++-.+ +-..+-.=.. ..+.++.+..++.+.+..+.+++.+|+=.|+|. .+++.+++..+.+.|
T Consensus 30 sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg~-~~~v~~tv~~l~~aG 108 (302)
T 3fa4_A 30 SARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTPVIADADTGYGG-PIMVARTTEQYSRSG 108 (302)
T ss_dssp HHHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSCEEEECTTTTSS-HHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccCCCEEEECCCCCCC-HHHHHHHHHHHHHcC
Confidence 3455667899998874222 2221211111 348899999998888765578899999999984 788999999999999
Q ss_pred CCEEEee
Q psy2895 234 IDILTIG 240 (293)
Q Consensus 234 ~~~i~i~ 240 (293)
+.-+.+-
T Consensus 109 aagv~iE 115 (302)
T 3fa4_A 109 VAAFHIE 115 (302)
T ss_dssp CCEEEEC
T ss_pred CcEEEEC
Confidence 9988884
No 325
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=55.81 E-value=19 Score=31.50 Aligned_cols=51 Identities=8% Similarity=0.059 Sum_probs=38.7
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeE
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGI 211 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ 211 (293)
.+.++.|+++|++.+.+.+-..+. ....+.+..++++++++++ |+.+-.++
T Consensus 30 ~d~~~ilk~~G~N~VRi~~w~~P~-----~g~~~~~~~~~~~~~A~~~--GlkV~ld~ 80 (332)
T 1hjs_A 30 QPLENILAANGVNTVRQRVWVNPA-----DGNYNLDYNIAIAKRAKAA--GLGVYIDF 80 (332)
T ss_dssp CCHHHHHHHTTCCEEEEEECSSCT-----TCTTSHHHHHHHHHHHHHT--TCEEEEEE
T ss_pred ccHHHHHHHCCCCEEEEeeeeCCC-----CCcCCHHHHHHHHHHHHHC--CCEEEEEe
Confidence 357888999999999887532222 1123789999999999999 99887765
No 326
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=55.76 E-value=27 Score=29.76 Aligned_cols=111 Identities=14% Similarity=0.124 Sum_probs=59.3
Q ss_pred hhHHHH-HHHHHHhhCCC--cEEEEEcCCCcCcHHHHHHHHHH-cCCCeeeeccccchHHHhh-cCCCCCHHHHHHHHHH
Q psy2895 123 SSHFVS-CIKHIRKLSTK--IKIEILIPDFRNQINHVLKIFKQ-ALPDVLNHNIETVPRLYKK-VRPGSDYKHSLNLLKN 197 (293)
Q Consensus 123 ~~~~~~-ll~~i~~~~~~--~~i~~~~~~~~~~~~e~l~~l~~-aG~~~i~~~less~~~~~~-i~~~~~~e~~l~~i~~ 197 (293)
.+.+.+ +++.+++..++ +.+.+..++ ..+..+.++.+.+ +|+|.+.+++-+ +..-+. ..-+.+.+...+.++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~p~~v~l~~~~-~~~~~~~a~~~~~~~g~d~iei~~~~-p~~~~g~~~~g~~~~~~~eii~~ 158 (311)
T 1ep3_A 81 LEVIMTEKLPWLNENFPELPIIANVAGSE-EADYVAVCAKIGDAANVKAIELNISC-PNVKHGGQAFGTDPEVAAALVKA 158 (311)
T ss_dssp HHHHHHTHHHHHHHHCTTSCEEEEECCSS-HHHHHHHHHHHTTSTTEEEEEEECCS-EEGGGTTEEGGGCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCcEEEEEcCCC-HHHHHHHHHHHhccCCCCEEEEeCCC-CCCCCchhhhcCCHHHHHHHHHH
Confidence 344433 45566652222 334443221 1122455666666 899988776643 111110 0012256777888888
Q ss_pred HHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 198 FKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 198 ~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
+++.. ++++..-+..+. .+..+.++.+.+.|++.+.+.
T Consensus 159 v~~~~-~~pv~vk~~~~~----~~~~~~a~~l~~~G~d~i~v~ 196 (311)
T 1ep3_A 159 CKAVS-KVPLYVKLSPNV----TDIVPIAKAVEAAGADGLTMI 196 (311)
T ss_dssp HHHHC-SSCEEEEECSCS----SCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHhc-CCCEEEEECCCh----HHHHHHHHHHHHcCCCEEEEe
Confidence 88763 444422222222 244566778889999998883
No 327
>2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3
Probab=55.71 E-value=42 Score=27.75 Aligned_cols=24 Identities=21% Similarity=0.502 Sum_probs=17.8
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 217 ENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 217 Et~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
.|.+.+.+.+..+++-|..++++.
T Consensus 216 ~t~~aL~~ii~~l~~~Gy~fvtl~ 239 (247)
T 2j13_A 216 DNAEALAKIIDDLREKGYHFKSLD 239 (247)
T ss_dssp THHHHHHHHHHHHHHTTCEEECHH
T ss_pred hHHHHHHHHHHHHHHCCCEEEEhH
Confidence 567777778888888887777664
No 328
>1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1
Probab=55.50 E-value=34 Score=31.46 Aligned_cols=71 Identities=15% Similarity=0.180 Sum_probs=46.9
Q ss_pred CcEEEEEcC-CCcCc---------HHHHHHHHHHcCCCeeeeccccchHHHhhcCC-CCCHHHHHHHHHHHHHhCCCcee
Q psy2895 139 KIKIEILIP-DFRNQ---------INHVLKIFKQALPDVLNHNIETVPRLYKKVRP-GSDYKHSLNLLKNFKKLYPNILT 207 (293)
Q Consensus 139 ~~~i~~~~~-~~~~~---------~~e~l~~l~~aG~~~i~~~less~~~~~~i~~-~~~~e~~l~~i~~~~~~~pgi~~ 207 (293)
.+.+-++.| +.++. +...|+.||.+|++.|.+.+ -=-+-+.-.+ .+++.-+.+.++.++++ |+++
T Consensus 12 ~vpv~VMlPLd~V~~~~~~~~~~~l~~~L~~LK~~GVdGVmvDV--WWGiVE~~~P~~YdWsgY~~L~~mv~~~--GLKl 87 (498)
T 1fa2_A 12 YVSLYVMLPLGVVNADNVFPDKEKVEDELKQVKAGGCDGVMVDV--WWGIIEAKGPKQYDWSAYRELFQLVKKC--GLKI 87 (498)
T ss_dssp CCEEEEECCTTSSCSSSCCCCHHHHHHHHHHHHHTTCCEEEEEE--EHHHHTCSBTTBCCCHHHHHHHHHHHHT--TCEE
T ss_pred CceEEEEeecceecCCCeeCCHHHHHHHHHHHHHcCCCEEEEEe--EeeeeccCCCCccCcHHHHHHHHHHHHc--CCeE
Confidence 345666666 43321 36679999999999987643 1112222222 56899999999999999 9987
Q ss_pred eEeEEe
Q psy2895 208 KSGIMV 213 (293)
Q Consensus 208 ~~~~iv 213 (293)
.+-|=+
T Consensus 88 q~vmSF 93 (498)
T 1fa2_A 88 QAIMSF 93 (498)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 554433
No 329
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=55.27 E-value=90 Score=25.93 Aligned_cols=69 Identities=17% Similarity=0.101 Sum_probs=46.3
Q ss_pred EEEEEcCCCcCcHHHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHH
Q psy2895 141 KIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDE 220 (293)
Q Consensus 141 ~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~e 220 (293)
.+.+..-+... .+....|+++|++.+-+|. ||+-. +. +-+-+.+-+.++.+.++ |+.+ |+-.|||.+
T Consensus 60 ~i~vgAQn~~~--~~~~~mL~d~G~~~ViiGH--SERR~--~f-~Etd~~v~~Kv~~Al~~--GL~p----I~CvGEtle 126 (244)
T 2v5b_A 60 KFQIAAQNAGN--ADALASLKDYGISWVVLGH--SERRL--YY-GETNEIVAEKVAQACAA--GFHV----IVCVGETNE 126 (244)
T ss_dssp TEEEEESCCCC--HHHHHHHHHTTCCEEEECC--HHHHH--HS-CCCHHHHHHHHHHHHHT--TCEE----EEEECCCHH
T ss_pred CceEEeccCCC--CCCHHHHHHcCCCEEEeCc--hhhhh--cc-CCCHHHHHHHHHHHHHC--CCeE----EEEcCCcHH
Confidence 46665533222 3348999999999998874 43221 12 34667777789999999 8854 566699988
Q ss_pred HH
Q psy2895 221 EI 222 (293)
Q Consensus 221 d~ 222 (293)
++
T Consensus 127 er 128 (244)
T 2v5b_A 127 ER 128 (244)
T ss_dssp HH
T ss_pred HH
Confidence 74
No 330
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=55.27 E-value=10 Score=34.83 Aligned_cols=33 Identities=6% Similarity=0.044 Sum_probs=28.6
Q ss_pred hcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec
Q psy2895 181 KVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL 215 (293)
Q Consensus 181 ~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~ 215 (293)
.+.+. .+.++..+.++.+|++ ||.|-.++++.+
T Consensus 89 ~id~~~Gt~~df~~lv~~~H~~--Gi~VilD~V~NH 122 (484)
T 2aaa_A 89 DVNSNFGTADNLKSLSDALHAR--GMYLMVDVVPDH 122 (484)
T ss_dssp EECTTTCCHHHHHHHHHHHHTT--TCEEEEEECCSB
T ss_pred ccCcccCCHHHHHHHHHHHHHC--CCEEEEEECcCC
Confidence 45554 3889999999999999 999999999987
No 331
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=55.25 E-value=94 Score=28.08 Aligned_cols=85 Identities=11% Similarity=-0.011 Sum_probs=53.3
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCC-----CC-CCChhHHHHHHHHHHhhC-CCcEEEEEcC-CCcC-cHHHHHH
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDD-----LH-DGGSSHFVSCIKHIRKLS-TKIKIEILIP-DFRN-QINHVLK 158 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~-----l~-~~~~~~~~~ll~~i~~~~-~~~~i~~~~~-~~~~-~~~e~l~ 158 (293)
.+++++.+.++++.+.|++.+-+-.|.+.. .+ ..+.+.-.+.++.+++.. +++.+.+=.+ ++.. +..+.++
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~~~t~~~A~~~~~ 224 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQFTTAGAIRLGQ 224 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHH
Confidence 579999999999999999998875443200 00 001345567888888764 6666666333 3221 1134566
Q ss_pred HHHHcCCCeeeecc
Q psy2895 159 IFKQALPDVLNHNI 172 (293)
Q Consensus 159 ~l~~aG~~~i~~~l 172 (293)
.|.+.|+..+.-++
T Consensus 225 ~Le~~~i~~iEeP~ 238 (433)
T 3rcy_A 225 AIEPYSPLWYEEPV 238 (433)
T ss_dssp HHGGGCCSEEECCS
T ss_pred HhhhcCCCEEECCC
Confidence 77778888876443
No 332
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=55.12 E-value=98 Score=26.31 Aligned_cols=139 Identities=9% Similarity=0.062 Sum_probs=67.4
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCC-CChhHH-HHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcC
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHD-GGSSHF-VSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQAL 164 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~-~~~~~~-~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG 164 (293)
.++.++++..++...+ |.+...+. .+.|.... .+.+.. ....+.+++.+- -.|++--.. ...+.++.+.++|
T Consensus 76 ~vTldemi~h~~aV~r-~~~~~~vv-aD~pfgsy~~s~~~a~~na~rl~~eaGa-~aVklEdg~---e~~~~I~al~~ag 149 (281)
T 1oy0_A 76 PISIDELIPLVRGVVR-GAPHALVV-ADLPFGSYEAGPTAALAAATRFLKDGGA-HAVKLEGGE---RVAEQIACLTAAG 149 (281)
T ss_dssp SCCGGGTHHHHHHHHH-HCTTSEEE-EECCTTSSTTCHHHHHHHHHHHHHTTCC-SEEEEEBSG---GGHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHh-cCCCCeEE-EECCCCcccCCHHHHHHHHHHHHHHhCC-eEEEECCcH---HHHHHHHHHHHCC
Confidence 5788999888887765 34422333 33221111 123333 334555554421 245553221 1256888888899
Q ss_pred CCee-eecccc-c---hHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEe
Q psy2895 165 PDVL-NHNIET-V---PRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTI 239 (293)
Q Consensus 165 ~~~i-~~~les-s---~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i 239 (293)
+..+ |+++.. + ..-|+.+.|....++.++-.+.+.++ |. +.|+=-+-.. +..+ ...+++.+-.+.|
T Consensus 150 IpV~gHiGLtPqsv~~~ggf~v~grt~~a~~~i~rA~a~~eA--GA----~~ivlE~vp~-~~a~--~it~~l~iP~igI 220 (281)
T 1oy0_A 150 IPVMAHIGFTPQSVNTLGGFRVQGRGDAAEQTIADAIAVAEA--GA----FAVVMEMVPA-ELAT--QITGKLTIPTVGI 220 (281)
T ss_dssp CCEEEEEECCC--------------CHHHHHHHHHHHHHHHH--TC----SEEEEESCCH-HHHH--HHHHHCSSCEEEE
T ss_pred CCEEeeecCCcceecccCCeEEEeCcHHHHHHHHHHHHHHHc--CC----cEEEEecCCH-HHHH--HHHHhCCCCEEEe
Confidence 8776 456533 2 12243333322335555555566666 54 4555226553 3222 3345677666766
Q ss_pred e
Q psy2895 240 G 240 (293)
Q Consensus 240 ~ 240 (293)
.
T Consensus 221 G 221 (281)
T 1oy0_A 221 G 221 (281)
T ss_dssp S
T ss_pred C
Confidence 4
No 333
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=54.90 E-value=1e+02 Score=27.03 Aligned_cols=105 Identities=11% Similarity=0.041 Sum_probs=58.2
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCCC----CCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcC
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRDD----LHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQAL 164 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~----l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG 164 (293)
+.+.+.+.++.+.+.|.+.+.++.-.+.+ +...+.+.+..+.+..++. ++.+.+. ..+ .+.++.+.+.
T Consensus 118 s~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~----Gl~~~te-~~d--~~~~~~l~~~- 189 (350)
T 1vr6_A 118 GREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKY----GMYVVTE-ALG--EDDLPKVAEY- 189 (350)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHH----TCEEEEE-CSS--GGGHHHHHHH-
T ss_pred CHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHc----CCcEEEE-eCC--HHHHHHHHHh-
Confidence 68899999999999999976554433321 1111234444443433333 4555441 233 3456667676
Q ss_pred CCeeeecccc--chHHHhhcC---------CC--CCHHHHHHHHHHHHHh
Q psy2895 165 PDVLNHNIET--VPRLYKKVR---------PG--SDYKHSLNLLKNFKKL 201 (293)
Q Consensus 165 ~~~i~~~les--s~~~~~~i~---------~~--~~~e~~l~~i~~~~~~ 201 (293)
++.+.++.-. +..+++.+. ++ .+.++|+.+++.++..
T Consensus 190 vd~lkIgAr~~~n~~LL~~va~~~kPVilk~G~~~tl~ei~~Ave~i~~~ 239 (350)
T 1vr6_A 190 ADIIQIGARNAQNFRLLSKAGSYNKPVLLKRGFMNTIEEFLLSAEYIANS 239 (350)
T ss_dssp CSEEEECGGGTTCHHHHHHHHTTCSCEEEECCTTCCHHHHHHHHHHHHHT
T ss_pred CCEEEECcccccCHHHHHHHHccCCcEEEcCCCCCCHHHHHHHHHHHHHC
Confidence 8999986422 334444442 11 1445666666666555
No 334
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=54.86 E-value=34 Score=28.67 Aligned_cols=50 Identities=8% Similarity=0.132 Sum_probs=31.4
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHh
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRK 135 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~ 135 (293)
...++++.++.++.+.+.|++.|.+|-=........+.+.+.+.++++++
T Consensus 15 G~~~~~~sl~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~ 64 (262)
T 3qy7_A 15 GAGDSADSIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNK 64 (262)
T ss_dssp SCSSHHHHHHHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 45789998899999999999999887332111111223455555544443
No 335
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=54.84 E-value=52 Score=28.42 Aligned_cols=84 Identities=8% Similarity=-0.082 Sum_probs=51.6
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcCCC-cCcHHHHHHHHHHc
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIPDF-RNQINHVLKIFKQA 163 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~~~-~~~~~e~l~~l~~a 163 (293)
..++.+.+.+.++.+.+.|+..+++.|.... .+..+.+.-.++++.+.+.. ..+.|-+.+.+. ..+..+..+...++
T Consensus 38 g~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE-~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~ 116 (315)
T 3si9_A 38 GAIDEKAFCNFVEWQITQGINGVSPVGTTGE-SPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKA 116 (315)
T ss_dssp SCBCHHHHHHHHHHHHHTTCSEEECSSTTTT-GGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccC-ccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhc
Confidence 4689999999999999999999887764431 11223455666777665542 223333333211 11124555667778
Q ss_pred CCCeeee
Q psy2895 164 LPDVLNH 170 (293)
Q Consensus 164 G~~~i~~ 170 (293)
|+|.+.+
T Consensus 117 Gadavlv 123 (315)
T 3si9_A 117 GADAVLV 123 (315)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9998764
No 336
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=54.78 E-value=99 Score=26.24 Aligned_cols=144 Identities=10% Similarity=0.134 Sum_probs=82.3
Q ss_pred CChhHHHHHHHHHHHCCCc---EEEEeeecCCCCC-----CCChhHHHHHHHHHHhhCC-CcEEEEEcCCCcC-cHHHHH
Q psy2895 88 LDIEEPKKIAYTINKLKLN---YVVITSVNRDDLH-----DGGSSHFVSCIKHIRKLST-KIKIEILIPDFRN-QINHVL 157 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~---~i~l~gg~~~~l~-----~~~~~~~~~ll~~i~~~~~-~~~i~~~~~~~~~-~~~e~l 157 (293)
.++++..+.++.+.+.|++ .|.+..+.|. .. ..+.+.+.++++.+++... .+.+++ ++++.. +..+.+
T Consensus 103 ~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~-~~g~~~~g~~~~~~~~ii~~vr~~~~~Pv~vK~-~~~~~~~~~~~~a 180 (314)
T 2e6f_A 103 LSVEENVAMVRRLAPVAQEKGVLLELNLSCPN-VPGKPQVAYDFEAMRTYLQQVSLAYGLPFGVKM-PPYFDIAHFDTAA 180 (314)
T ss_dssp SSHHHHHHHHHHHHHHHHHHCCEEEEECCCCC-STTCCCGGGSHHHHHHHHHHHHHHHCSCEEEEE-CCCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCcCceEEEEcCCCC-CCCchhhcCCHHHHHHHHHHHHHhcCCCEEEEE-CCCCCHHHHHHHH
Confidence 4678889999988888888 7877665431 11 1245678889999987631 133444 333311 123447
Q ss_pred HHHHHcC-CCeeeec--------ccc-chH-HH------hhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHH
Q psy2895 158 KIFKQAL-PDVLNHN--------IET-VPR-LY------KKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDE 220 (293)
Q Consensus 158 ~~l~~aG-~~~i~~~--------les-s~~-~~------~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~e 220 (293)
+.+.++| +|.+.+. ++. ... .. ..+.........++.++.+++..|++++ +..|=-.|.+
T Consensus 181 ~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipv---i~~GGI~~~~ 257 (314)
T 2e6f_A 181 AVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLV---FGCGGVYSGE 257 (314)
T ss_dssp HHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEE---EEESSCCSHH
T ss_pred HHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCE---EEECCCCCHH
Confidence 7788899 9988642 110 000 00 0000001123346778888887555543 1222246788
Q ss_pred HHHHHHHHHHhCCCCEEEee
Q psy2895 221 EILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 221 d~~~~l~~l~~l~~~~i~i~ 240 (293)
|..+.+. .|.+.+.+.
T Consensus 258 da~~~l~----~GAd~V~ig 273 (314)
T 2e6f_A 258 DAFLHIL----AGASMVQVG 273 (314)
T ss_dssp HHHHHHH----HTCSSEEEC
T ss_pred HHHHHHH----cCCCEEEEc
Confidence 8877763 588888775
No 337
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=54.78 E-value=40 Score=27.44 Aligned_cols=84 Identities=8% Similarity=0.047 Sum_probs=45.9
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCe
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDV 167 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~ 167 (293)
.|..+.+.. .+.|+..|.---|.-++....+.+.+.++.+.++..... .++...++.+ ...+.....+|+|.
T Consensus 111 fS~~Qa~~A----a~AGa~yISPfvgRi~d~~~dG~~~v~~i~~~~~~~~~~--t~ilaAS~R~--~~~v~~~a~~G~d~ 182 (212)
T 3r8r_A 111 FNANQALLA----ARAGATYVSPFLGRLDDIGHNGLDLISEVKQIFDIHGLD--TQIIAASIRH--PQHVTEAALRGAHI 182 (212)
T ss_dssp CSHHHHHHH----HHHTCSEEEEBHHHHHHTTSCHHHHHHHHHHHHHHHTCC--CEEEEBSCCS--HHHHHHHHHTTCSE
T ss_pred CCHHHHHHH----HHcCCeEEEeccchhhhcCCChHHHHHHHHHHHHHcCCC--CEEEEecCCC--HHHHHHHHHcCCCE
Confidence 455555432 334777664433322223222355666777766666443 3443333444 44555555689999
Q ss_pred eeeccccchHHHhhcC
Q psy2895 168 LNHNIETVPRLYKKVR 183 (293)
Q Consensus 168 i~~~less~~~~~~i~ 183 (293)
+.++ +++++++-
T Consensus 183 ~Tip----~~vl~~l~ 194 (212)
T 3r8r_A 183 GTMP----LKVIHALT 194 (212)
T ss_dssp EEEC----HHHHHHHT
T ss_pred EEcC----HHHHHHHH
Confidence 8887 56777665
No 338
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=54.65 E-value=1.2e+02 Score=27.01 Aligned_cols=84 Identities=10% Similarity=-0.007 Sum_probs=53.1
Q ss_pred CChhHHHHHH-HHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhh-CCCcEEEEEcC-CCcC-cHHHHHHHHHHc
Q psy2895 88 LDIEEPKKIA-YTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKL-STKIKIEILIP-DFRN-QINHVLKIFKQA 163 (293)
Q Consensus 88 ~~~eei~~~~-~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~-~~~~~i~~~~~-~~~~-~~~e~l~~l~~a 163 (293)
.+++++.+.+ +++.+.|++.+-+--|........+.+.-.+.++.+++. .+++.+.+=.+ ++.. +..+.++.|.+.
T Consensus 138 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~~~~~~A~~~~~~L~~~ 217 (393)
T 4dwd_A 138 RSVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELLGPDAVIGFDANNGYSVGGAIRVGRALEDL 217 (393)
T ss_dssp SCHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHHCTTCCEEEECTTCCCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhh
Confidence 3589999999 888888999887754432111111345666788888886 45666666434 3321 113456778888
Q ss_pred CCCeeeec
Q psy2895 164 LPDVLNHN 171 (293)
Q Consensus 164 G~~~i~~~ 171 (293)
|+..+.=+
T Consensus 218 ~i~~iEqP 225 (393)
T 4dwd_A 218 GYSWFEEP 225 (393)
T ss_dssp TCSEEECC
T ss_pred CCCEEECC
Confidence 88877533
No 339
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=54.59 E-value=49 Score=28.07 Aligned_cols=82 Identities=6% Similarity=0.029 Sum_probs=50.3
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeec--CCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcCCCcC-cHHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVN--RDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIPDFRN-QINHVLKIFK 161 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~--~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~~~~~-~~~e~l~~l~ 161 (293)
..++.+.+.+.++.+.+.|+..+++.|.. .+.+ +.+.-.++++.+.+.. ..+.+-+.+.+... +..+..+...
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~L---s~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~ 92 (289)
T 2yxg_A 16 KEVDFDGLEENINFLIENGVSGIVAVGTTGESPTL---SHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAE 92 (289)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGS---CHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhC---CHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHH
Confidence 45788899999999999999998886654 3333 3455666777665542 22334333321111 1134555566
Q ss_pred HcCCCeeee
Q psy2895 162 QALPDVLNH 170 (293)
Q Consensus 162 ~aG~~~i~~ 170 (293)
++|+|.+.+
T Consensus 93 ~~Gadavlv 101 (289)
T 2yxg_A 93 DVGADAVLS 101 (289)
T ss_dssp HHTCSEEEE
T ss_pred hcCCCEEEE
Confidence 679998754
No 340
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=54.47 E-value=55 Score=28.26 Aligned_cols=84 Identities=6% Similarity=-0.070 Sum_probs=60.0
Q ss_pred HHHHHHHcCCCeeeecccc-chHHHhhcCC-CCCHHHHHHHHHHHHHhCC-CceeeEeEEeecCCCHHHHHHHHHHHHhC
Q psy2895 156 VLKIFKQALPDVLNHNIET-VPRLYKKVRP-GSDYKHSLNLLKNFKKLYP-NILTKSGIMVGLGENDEEILTVIHDMRNH 232 (293)
Q Consensus 156 ~l~~l~~aG~~~i~~~les-s~~~~~~i~~-~~~~e~~l~~i~~~~~~~p-gi~~~~~~ivG~gEt~ed~~~~l~~l~~l 232 (293)
....+.++|++.+.++-.+ +-..+-.=.. ..+.++.+..++.+.+..+ .+++.+|+=.|+|. .+++.+++..+.+.
T Consensus 37 sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg~-~~~v~~~v~~l~~a 115 (307)
T 3lye_A 37 SARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPFGPPLIADMDTGYGG-PIMVARTVEHYIRS 115 (307)
T ss_dssp HHHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSSS-HHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCCCCcEEEECCCCCCC-HHHHHHHHHHHHHc
Confidence 3555667899998874222 2121211111 3489999999998887644 57888999889874 78899999999999
Q ss_pred CCCEEEee
Q psy2895 233 NIDILTIG 240 (293)
Q Consensus 233 ~~~~i~i~ 240 (293)
|+.-+.|-
T Consensus 116 Gaagv~iE 123 (307)
T 3lye_A 116 GVAGAHLE 123 (307)
T ss_dssp TCCEEEEC
T ss_pred CCeEEEEc
Confidence 99988884
No 341
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=54.38 E-value=97 Score=27.00 Aligned_cols=78 Identities=5% Similarity=-0.070 Sum_probs=46.3
Q ss_pred CChhHHHHHHHHHHHCCCcEEEE--eeecC-----CCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHH
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVI--TSVNR-----DDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIF 160 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l--~gg~~-----~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l 160 (293)
-+.+++.+.+++..+.|+..+-+ .|+-. ......+.+.+.++++..++..-.+.+++.. .+.++..
T Consensus 169 ~~~~~~~~~v~~~~~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~-------~~~i~~~ 241 (423)
T 3feq_A 169 DGVEGVRLAVREEIQKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAANTYVMAHAYT-------GRAIARA 241 (423)
T ss_dssp CSHHHHHHHHHHHHHTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCCEEEEEEE-------HHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHCCCeEEEEeCC-------hHHHHHH
Confidence 35788888899888888876533 33211 1111234578888888888874333444331 2334444
Q ss_pred HHcCCCeeeecc
Q psy2895 161 KQALPDVLNHNI 172 (293)
Q Consensus 161 ~~aG~~~i~~~l 172 (293)
.++|++.+.+..
T Consensus 242 l~~g~~~i~H~~ 253 (423)
T 3feq_A 242 VRCGVRTIEHGN 253 (423)
T ss_dssp HHHTCCEEEEEE
T ss_pred HHcCCCEEeccC
Confidence 457888776653
No 342
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=54.29 E-value=30 Score=30.11 Aligned_cols=63 Identities=8% Similarity=-0.018 Sum_probs=41.5
Q ss_pred HHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeecc
Q psy2895 95 KIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNI 172 (293)
Q Consensus 95 ~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~l 172 (293)
++++++.+.|+..|.|-. + +.+.+.+.++.++. .+.+.++ .+ ++ .+.+..+.+.|+|.+.+|-
T Consensus 242 dea~eAl~aGaD~I~LDn-----~---~~~~l~~av~~l~~---~v~ieaS-GG-It--~~~I~~~a~tGVD~isvGa 304 (320)
T 3paj_A 242 AELEEAISAGADIIMLDN-----F---SLEMMREAVKINAG---RAALENS-GN-IT--LDNLKECAETGVDYISVGA 304 (320)
T ss_dssp HHHHHHHHTTCSEEEEES-----C---CHHHHHHHHHHHTT---SSEEEEE-SS-CC--HHHHHHHHTTTCSEEECTH
T ss_pred HHHHHHHHcCCCEEEECC-----C---CHHHHHHHHHHhCC---CCeEEEE-CC-CC--HHHHHHHHHcCCCEEEECc
Confidence 455566677988887732 2 24567777766542 3445443 23 44 7889999999999998863
No 343
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=54.21 E-value=87 Score=27.65 Aligned_cols=82 Identities=11% Similarity=-0.029 Sum_probs=50.0
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeec--CCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcCCCcC-cHHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVN--RDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIPDFRN-QINHVLKIFK 161 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~--~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~~~~~-~~~e~l~~l~ 161 (293)
..++.+.+.+.++.+.+.|+..+++.|.. ...+ +.+.-.++++.+.+.. ..+.|-+.+.+... +..+..+...
T Consensus 75 g~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~L---s~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~ 151 (360)
T 4dpp_A 75 GRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLM---SWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGF 151 (360)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGS---CHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEecccccChhhC---CHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHH
Confidence 46889999999999999999998886643 3333 3455556666655542 23344333321111 1134455566
Q ss_pred HcCCCeeee
Q psy2895 162 QALPDVLNH 170 (293)
Q Consensus 162 ~aG~~~i~~ 170 (293)
++|+|.+.+
T Consensus 152 ~~Gadavlv 160 (360)
T 4dpp_A 152 AVGMHAALH 160 (360)
T ss_dssp HTTCSEEEE
T ss_pred HcCCCEEEE
Confidence 679988754
No 344
>3aj7_A Oligo-1,6-glucosidase; (beta/alpha)8-barrel, hydrolase; 1.30A {Saccharomyces cerevisiae} PDB: 3a4a_A* 3a47_A 3axi_A* 3axh_A*
Probab=54.20 E-value=19 Score=34.09 Aligned_cols=67 Identities=16% Similarity=0.234 Sum_probs=46.0
Q ss_pred HHHHHHHHHcCCCeeeec-c-cc-c------hHHHhhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHH
Q psy2895 154 NHVLKIFKQALPDVLNHN-I-ET-V------PRLYKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEI 222 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~-l-es-s------~~~~~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~ 222 (293)
.+.|..|++.|++.|.+. + ++ . ..-|..+.+. .+.++..+.++.+|+. ||.|-.++++.+ +..-.-+
T Consensus 43 ~~~Ldyl~~LGv~~i~l~Pi~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~h~~--Gi~VilD~V~NH~~~~~~wf 120 (589)
T 3aj7_A 43 ASKLEYIKELGADAIWISPFYDSPQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKL--GMKFITDLVINHCSSEHEWF 120 (589)
T ss_dssp HHTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHHT--TCEEEEEECCSBCCTTSHHH
T ss_pred HHHHHHHHHcCCCEEEECCcccCCCCCCCcCcccccccccccCCHHHHHHHHHHHHHC--CCEEEEEecccccccchhHH
Confidence 455677777788887652 2 22 1 1122345554 3899999999999999 999999999998 5443333
No 345
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=54.16 E-value=1.1e+02 Score=26.43 Aligned_cols=16 Identities=0% Similarity=-0.095 Sum_probs=9.1
Q ss_pred HHHHHHHHcCCCeeee
Q psy2895 155 HVLKIFKQALPDVLNH 170 (293)
Q Consensus 155 e~l~~l~~aG~~~i~~ 170 (293)
+.++.+.++|+..+++
T Consensus 107 ~~v~~l~~aGaagv~i 122 (307)
T 3lye_A 107 RTVEHYIRSGVAGAHL 122 (307)
T ss_dssp HHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHcCCeEEEE
Confidence 4455555666666554
No 346
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=54.11 E-value=81 Score=25.03 Aligned_cols=80 Identities=19% Similarity=0.220 Sum_probs=46.3
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCC-CcEEEEEcCCCcCcHHHHHHHHHHcCCC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLST-KIKIEILIPDFRNQINHVLKIFKQALPD 166 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~-~~~i~~~~~~~~~~~~e~l~~l~~aG~~ 166 (293)
.+.....+.++.+.+.|++.+.+---+.. +.. ....-.++++.+++... .+.+.+...+. ++.++.+.++|+|
T Consensus 13 ~D~~~~~~~~~~~~~~G~~~i~~~~~dg~-~~~-~~~~g~~~i~~i~~~~~~~~~v~l~v~d~----~~~i~~~~~~gad 86 (220)
T 2fli_A 13 ADYANFASELARIEETDAEYVHIDIMDGQ-FVP-NISFGADVVASMRKHSKLVFDCHLMVVDP----ERYVEAFAQAGAD 86 (220)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEEEEBSS-SSS-CBCBCHHHHHHHHTTCCSEEEEEEESSSG----GGGHHHHHHHTCS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeecCC-CCC-ccccCHHHHHHHHHhCCCCEEEEEeecCH----HHHHHHHHHcCCC
Confidence 45677778888888889988665432211 100 01111467777877542 12344443221 2346888889999
Q ss_pred eeeeccc
Q psy2895 167 VLNHNIE 173 (293)
Q Consensus 167 ~i~~~le 173 (293)
.+.+..+
T Consensus 87 ~v~vh~~ 93 (220)
T 2fli_A 87 IMTIHTE 93 (220)
T ss_dssp EEEEEGG
T ss_pred EEEEccC
Confidence 9987543
No 347
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=53.97 E-value=20 Score=30.95 Aligned_cols=63 Identities=8% Similarity=0.041 Sum_probs=41.8
Q ss_pred HHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeecc
Q psy2895 95 KIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNI 172 (293)
Q Consensus 95 ~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~l 172 (293)
++++++.+.|+.-|.|- + + +.+.+.+.++.++. .+.+.++ .+ ++ .+.+..+.+.|+|.+++|.
T Consensus 218 ~e~~eAl~aGaDiImLD---n--~---s~~~l~~av~~~~~---~v~leaS-GG-It--~~~i~~~A~tGVD~IsvGa 280 (300)
T 3l0g_A 218 SQVEESLSNNVDMILLD---N--M---SISEIKKAVDIVNG---KSVLEVS-GC-VN--IRNVRNIALTGVDYISIGC 280 (300)
T ss_dssp HHHHHHHHTTCSEEEEE---S--C---CHHHHHHHHHHHTT---SSEEEEE-SS-CC--TTTHHHHHTTTCSEEECGG
T ss_pred HHHHHHHHcCCCEEEEC---C--C---CHHHHHHHHHhhcC---ceEEEEE-CC-CC--HHHHHHHHHcCCCEEEeCc
Confidence 55666667899888772 2 2 24677777777654 3445543 23 33 5678888899999999764
No 348
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=53.85 E-value=74 Score=27.73 Aligned_cols=70 Identities=4% Similarity=0.010 Sum_probs=46.0
Q ss_pred hhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEc-C------------CCcCc---H
Q psy2895 90 IEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILI-P------------DFRNQ---I 153 (293)
Q Consensus 90 ~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~-~------------~~~~~---~ 153 (293)
.+|.++++..=.+.|+.-+.+- |.+ .++++++.+++.+|++.+-.+. + |+++. +
T Consensus 242 ~~EAlre~~~Di~EGAD~vMVK----Pal------~YLDIi~~vk~~~p~~P~aaYqVSGEYAMikaAa~~GwiD~~~~v 311 (342)
T 1h7n_A 242 RGLARRALERDMSEGADGIIVK----PST------FYLDIMRDASEICKDLPICAYHVSGEYAMLHAAAEKGVVDLKTIA 311 (342)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEE----SSG------GGHHHHHHHHHHTTTSCEEEEECHHHHHHHHHHHHTTSSCHHHHH
T ss_pred HHHHHHHHHhhHHhCCCeEEEe----cCc------cHHHHHHHHHHhccCCCeEEEEcCcHHHHHHHHHHcCCccHHHHH
Confidence 4556666555567799988774 333 2679999999998777776653 2 23332 2
Q ss_pred HHHHHHHHHcCCCeee
Q psy2895 154 NHVLKIFKQALPDVLN 169 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~ 169 (293)
.|.+..+|+||.|.|-
T Consensus 312 ~Esl~~~kRAGAd~Ii 327 (342)
T 1h7n_A 312 FESHQGFLRAGARLII 327 (342)
T ss_dssp HHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHhcCCCEEE
Confidence 5666777778877653
No 349
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=53.82 E-value=1.1e+02 Score=26.70 Aligned_cols=83 Identities=10% Similarity=-0.008 Sum_probs=53.5
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCC-CCCChhHHHHHHHHHHhh-CCCcEEEEEcC-CCcC-cHHHHHHHHHHc
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDL-HDGGSSHFVSCIKHIRKL-STKIKIEILIP-DFRN-QINHVLKIFKQA 163 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l-~~~~~~~~~~ll~~i~~~-~~~~~i~~~~~-~~~~-~~~e~l~~l~~a 163 (293)
.++++..+.++.+.+.|++.+-+-.|... + ...+.+.-.+.++.+++. .+++.+.+=.+ ++.. +..+.++.|.+.
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~-~~~~~~~~~~~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~ 226 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPP-VSWAPDVKMDLKACAAVREAVGPDIRLMIDAFHWYSRTDALALGRGLEKL 226 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTT-STTCCCHHHHHHHHHHHHHHHCTTSEEEEECCTTCCHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCc-cccccchHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHhc
Confidence 57899999999998889998877655421 1 011245667888888875 46677776444 3321 113456667777
Q ss_pred CCCeeeec
Q psy2895 164 LPDVLNHN 171 (293)
Q Consensus 164 G~~~i~~~ 171 (293)
|++.+.-+
T Consensus 227 ~i~~iE~P 234 (382)
T 1rvk_A 227 GFDWIEEP 234 (382)
T ss_dssp TCSEEECC
T ss_pred CCCEEeCC
Confidence 88876543
No 350
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=53.82 E-value=55 Score=28.87 Aligned_cols=86 Identities=9% Similarity=0.142 Sum_probs=49.4
Q ss_pred HHHHHHHHcCCCeeeeccc-c--chHHHhh-cC-C----CCCHHH----HHHHHHHHHHhCCCceeeEeEEee--c----
Q psy2895 155 HVLKIFKQALPDVLNHNIE-T--VPRLYKK-VR-P----GSDYKH----SLNLLKNFKKLYPNILTKSGIMVG--L---- 215 (293)
Q Consensus 155 e~l~~l~~aG~~~i~~~le-s--s~~~~~~-i~-~----~~~~e~----~l~~i~~~~~~~pgi~~~~~~ivG--~---- 215 (293)
+..++.+++|.|.|.++.- + ....+.- .+ | +.+++. .+++++.++++.+.-.+..-+=.+ +
T Consensus 165 ~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~vg~~~v~vrls~~~~~~~~~ 244 (364)
T 1vyr_A 165 QAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEWSADRIGIRVSPIGTFQNVD 244 (364)
T ss_dssp HHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHSCGGGEEEEECCSSCBTTBC
T ss_pred HHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhcCCCcEEEEEcccccccccc
Confidence 3445567789999987431 1 0222211 11 1 224444 466677888775311332211111 1
Q ss_pred --CCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 216 --GENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 216 --gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
+.+.++..+.++.+.+.|++.+.+.
T Consensus 245 ~~~~~~~~~~~~a~~l~~~G~d~i~v~ 271 (364)
T 1vyr_A 245 NGPNEEADALYLIEELAKRGIAYLHMS 271 (364)
T ss_dssp CCTTHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEEEe
Confidence 3367788888999999999999886
No 351
>1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A*
Probab=53.77 E-value=71 Score=29.40 Aligned_cols=71 Identities=13% Similarity=0.166 Sum_probs=47.2
Q ss_pred CcEEEEEcC-CCcCc---------HHHHHHHHHHcCCCeeeeccccchHHHhhcCC-CCCHHHHHHHHHHHHHhCCCcee
Q psy2895 139 KIKIEILIP-DFRNQ---------INHVLKIFKQALPDVLNHNIETVPRLYKKVRP-GSDYKHSLNLLKNFKKLYPNILT 207 (293)
Q Consensus 139 ~~~i~~~~~-~~~~~---------~~e~l~~l~~aG~~~i~~~less~~~~~~i~~-~~~~e~~l~~i~~~~~~~pgi~~ 207 (293)
.+.+-++.| +.++. +...|+.||.+|++.|.+.+ -=-+-+.-.+ .+++.-+.+.++.++++ |+++
T Consensus 11 ~vpv~VMlPLd~V~~~~~~~~~~~l~~~L~~LK~~GVdGVmvDV--WWGiVE~~~P~~YdWsgY~~l~~mv~~~--GLKl 86 (495)
T 1wdp_A 11 YVPVYVMLPLGVVNVDNVFEDPDGLKEQLLQLRAAGVDGVMVDV--WWGIIELKGPKQYDWRAYRSLLQLVQEC--GLTL 86 (495)
T ss_dssp CCCEEEECCTTSBCTTSCBCCHHHHHHHHHHHHHTTCCEEEEEE--EHHHHTCSSTTCCCCHHHHHHHHHHHHT--TCEE
T ss_pred CccEEEeeecceecCCCeeCCHHHHHHHHHHHHHcCCCEEEEEe--EeeeeccCCCCccCcHHHHHHHHHHHHc--CCeE
Confidence 455666666 43321 36679999999999987643 1122222222 56999999999999999 9987
Q ss_pred eEeEEe
Q psy2895 208 KSGIMV 213 (293)
Q Consensus 208 ~~~~iv 213 (293)
.+-|=+
T Consensus 87 q~vmSF 92 (495)
T 1wdp_A 87 QAIMSF 92 (495)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 554433
No 352
>3bc9_A AMYB, alpha amylase, catalytic region; acarbose, thermostable, halophilic, N domain, starch binding, hydrolase; HET: G6D GLC ACI BGC ACR; 1.35A {Halothermothrix orenii} PDB: 3bcd_A* 3bcf_A
Probab=53.74 E-value=18 Score=34.34 Aligned_cols=60 Identities=10% Similarity=-0.003 Sum_probs=43.4
Q ss_pred HHHHHHHHHcCCCeeeec-c-cc-ch---------HHHh--------hcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEE
Q psy2895 154 NHVLKIFKQALPDVLNHN-I-ET-VP---------RLYK--------KVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIM 212 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~-l-es-s~---------~~~~--------~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~i 212 (293)
.+.|+.|++.|++.|.++ + ++ +. +.++ .+.+. .+.+++.+.++.+|+. ||.|-.+++
T Consensus 153 ~~~LdyLk~LGvtaIwL~Pi~~~~s~~~~~GYd~~dy~~l~e~~q~g~idp~~Gt~~dfk~Lv~~aH~~--GI~VilD~V 230 (599)
T 3bc9_A 153 AERAPELAEAGFTAVWLPPANKGMAGIHDVGYGTYDLWDLGEFDQKGTVRTKYGTKGELENAIDALHNN--DIKVYFDAV 230 (599)
T ss_dssp HHHHHHHHHHTCCEEECCCCSEETTGGGCCSCSEEETTCSSCSCBTTBSSBTTBCHHHHHHHHHHHHHT--TCEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECCcccCCCCCCCCCCChhhcccccccccccccCCCCCCHHHHHHHHHHHHHC--CCEEEEEEC
Confidence 456778888888887653 2 21 11 1121 25543 3899999999999999 999999999
Q ss_pred eec
Q psy2895 213 VGL 215 (293)
Q Consensus 213 vG~ 215 (293)
+.+
T Consensus 231 ~NH 233 (599)
T 3bc9_A 231 LNH 233 (599)
T ss_dssp CSE
T ss_pred cCC
Confidence 988
No 353
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=53.67 E-value=1.2e+02 Score=26.82 Aligned_cols=125 Identities=11% Similarity=0.046 Sum_probs=74.0
Q ss_pred CChhHHHHHHHHHHHC-CCcEEEEeeecCCCCCCCChhHHHHHHHHHHhh-CCCcEEEEEcC-CCcC-cHHHHHHHHHHc
Q psy2895 88 LDIEEPKKIAYTINKL-KLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKL-STKIKIEILIP-DFRN-QINHVLKIFKQA 163 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~-G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~-~~~~~i~~~~~-~~~~-~~~e~l~~l~~a 163 (293)
.+++++.+.++++.+. |++.+-+--|.. + .+.-.+.++.+++. .|++.+.+=.+ ++.. +..+.++.|.+.
T Consensus 166 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~~-~-----~~~d~~~v~avR~a~G~~~~l~vDaN~~~~~~~A~~~~~~l~~~ 239 (383)
T 3toy_A 166 LDARDDERTLRTACDEHGFRAIKSKGGHG-D-----LATDEAMIKGLRALLGPDIALMLDFNQSLDPAEATRRIARLADY 239 (383)
T ss_dssp CCHHHHHHHHHHHHHTSCCCEEEEECCSS-C-----HHHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGG
T ss_pred CCHHHHHHHHHHHHHccCCcEEEEecCCC-C-----HHHHHHHHHHHHHHhCCCCeEEEeCCCCCCHHHHHHHHHHHHhh
Confidence 5799999999999998 999887765532 1 24455778888876 46777776444 3322 113456677777
Q ss_pred CCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 164 LPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 164 G~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
|+..+-=++. ..++ +.++.+++.. ++++. .+|+..+..+....++.-.++.+.+.
T Consensus 240 ~i~~iEeP~~-----------~~d~----~~~~~l~~~~-~iPIa------~dE~~~~~~~~~~~i~~~a~d~v~ik 294 (383)
T 3toy_A 240 DLTWIEEPVP-----------QENL----SGHAAVRERS-EIPIQ------AGENWWFPRGFAEAIAAGASDFIMPD 294 (383)
T ss_dssp CCSEEECCSC-----------TTCH----HHHHHHHHHC-SSCEE------ECTTCCHHHHHHHHHHHTCCSEECCC
T ss_pred CCCEEECCCC-----------cchH----HHHHHHHhhc-CCCEE------eCCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 7776642221 1222 3344555541 34332 25655555555555555567766553
No 354
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=53.61 E-value=96 Score=25.75 Aligned_cols=119 Identities=13% Similarity=0.132 Sum_probs=71.2
Q ss_pred hHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeee
Q psy2895 91 EEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNH 170 (293)
Q Consensus 91 eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~ 170 (293)
....+.++.+.+.|+..|.+..-+ .+.....++ ++.+++.. ++. +...+++.+ +..+...+++|.|.+.+
T Consensus 65 ~~p~~~A~~~~~~GA~~isvlt~~--~~f~G~~~~----l~~i~~~v-~lP--vl~kdfI~d-~~qi~~a~~~GAD~VlL 134 (254)
T 1vc4_A 65 VDPVEAALAYARGGARAVSVLTEP--HRFGGSLLD----LKRVREAV-DLP--LLRKDFVVD-PFMLEEARAFGASAALL 134 (254)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECCC--SSSCCCHHH----HHHHHHHC-CSC--EEEESCCCS-HHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHcCCCEEEEecch--hhhccCHHH----HHHHHHhc-CCC--EEECCcCCC-HHHHHHHHHcCCCEEEE
Confidence 667888888899999998774332 232223333 34444432 222 333455543 55778888999999998
Q ss_pred ccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEeecC
Q psy2895 171 NIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQY 242 (293)
Q Consensus 171 ~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~~~ 242 (293)
+... + + ++..+.++.+++. |+.+- +- -.+.+|.. .+.+++.+.+.+++.
T Consensus 135 ~~~~----l-------~-~~l~~l~~~a~~l--Gl~~l----ve-v~~~~E~~----~a~~~gad~IGvn~~ 183 (254)
T 1vc4_A 135 IVAL----L-------G-ELTGAYLEEARRL--GLEAL----VE-VHTERELE----IALEAGAEVLGINNR 183 (254)
T ss_dssp EHHH----H-------G-GGHHHHHHHHHHH--TCEEE----EE-ECSHHHHH----HHHHHTCSEEEEESB
T ss_pred Cccc----h-------H-HHHHHHHHHHHHC--CCeEE----EE-ECCHHHHH----HHHHcCCCEEEEccc
Confidence 7421 1 1 2344566677788 87542 22 23455543 455678899998754
No 355
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=53.43 E-value=59 Score=28.45 Aligned_cols=82 Identities=11% Similarity=0.028 Sum_probs=50.7
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeec--CCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcCCCcC-cHHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVN--RDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIPDFRN-QINHVLKIFK 161 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~--~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~~~~~-~~~e~l~~l~ 161 (293)
..++.+.+.+.++.+.+.|+..+++.|.. ...+ +.+.-.++++.+.+.. ..+.|-+.+.+... +..+..+...
T Consensus 47 g~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~L---s~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~ 123 (343)
T 2v9d_A 47 GQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQL---GAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQ 123 (343)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGS---CHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhC---CHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHH
Confidence 46899999999999999999988886654 3333 3455666777665542 22334333321111 1134455566
Q ss_pred HcCCCeeee
Q psy2895 162 QALPDVLNH 170 (293)
Q Consensus 162 ~aG~~~i~~ 170 (293)
++|+|.+.+
T Consensus 124 ~~Gadavlv 132 (343)
T 2v9d_A 124 QAGADGIVV 132 (343)
T ss_dssp HHTCSEEEE
T ss_pred hcCCCEEEE
Confidence 679998754
No 356
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=53.30 E-value=74 Score=24.34 Aligned_cols=72 Identities=10% Similarity=0.045 Sum_probs=43.6
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCC
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPD 166 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~ 166 (293)
..+++++.+.+ .+.+..-|.+++-... ..+.+.++++.+++..+. .+.++..|... .+..+.+++.|+|
T Consensus 55 ~~p~e~lv~aa---~~~~~diV~lS~~~~~-----~~~~~~~~i~~L~~~g~~-~i~v~vGG~~~--~~~~~~l~~~G~d 123 (161)
T 2yxb_A 55 RQTPEQVAMAA---VQEDVDVIGVSILNGA-----HLHLMKRLMAKLRELGAD-DIPVVLGGTIP--IPDLEPLRSLGIR 123 (161)
T ss_dssp BCCHHHHHHHH---HHTTCSEEEEEESSSC-----HHHHHHHHHHHHHHTTCT-TSCEEEEECCC--HHHHHHHHHTTCC
T ss_pred CCCHHHHHHHH---HhcCCCEEEEEeechh-----hHHHHHHHHHHHHhcCCC-CCEEEEeCCCc--hhcHHHHHHCCCc
Confidence 36778877555 4457777777655421 246788888888886531 23333333333 3455667788998
Q ss_pred eee
Q psy2895 167 VLN 169 (293)
Q Consensus 167 ~i~ 169 (293)
.+.
T Consensus 124 ~v~ 126 (161)
T 2yxb_A 124 EIF 126 (161)
T ss_dssp EEE
T ss_pred EEE
Confidence 754
No 357
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=53.27 E-value=20 Score=33.18 Aligned_cols=34 Identities=12% Similarity=0.175 Sum_probs=29.3
Q ss_pred cCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec-CC
Q psy2895 182 VRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GE 217 (293)
Q Consensus 182 i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gE 217 (293)
+.+. .+.++..+.++.+|+. ||.|-.++++.+ +.
T Consensus 74 idp~~Gt~~dfk~Lv~~aH~~--Gi~VilD~V~NH~~~ 109 (515)
T 1hvx_A 74 VRTKYGTKAQYLQAIQAAHAA--GMQVYADVVFDHKGG 109 (515)
T ss_dssp SSCSSCCHHHHHHHHHHHHHT--TCEEEEEECCSEECC
T ss_pred cCCCCCCHHHHHHHHHHHHHC--CCEEEEEEecCCccC
Confidence 5543 4899999999999999 999999999988 53
No 358
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=53.26 E-value=32 Score=29.20 Aligned_cols=82 Identities=9% Similarity=0.122 Sum_probs=62.4
Q ss_pred HHHHHHHcCCCeeeeccccchHHHhhcCC---CCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhC
Q psy2895 156 VLKIFKQALPDVLNHNIETVPRLYKKVRP---GSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNH 232 (293)
Q Consensus 156 ~l~~l~~aG~~~i~~~less~~~~~~i~~---~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l 232 (293)
....+.++|++.+.++=.+.-.. .-.+ ..+.++.+..++.+.+..+ +++.+|+=.|+|.+.++..+++..+.+.
T Consensus 28 sA~~~~~aG~~ai~vsg~s~a~~--~G~pD~~~vt~~em~~~~~~I~~~~~-~pviaD~d~Gyg~~~~~~~~~v~~l~~a 104 (275)
T 2ze3_A 28 SARLLEAAGFTAIGTTSAGIAHA--RGRTDGQTLTRDEMGREVEAIVRAVA-IPVNADIEAGYGHAPEDVRRTVEHFAAL 104 (275)
T ss_dssp HHHHHHHHTCSCEEECHHHHHHH--SCCCSSSSSCHHHHHHHHHHHHHHCS-SCEEEECTTCSSSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEECcHHHHHh--CCCCCCCCCCHHHHHHHHHHHHhhcC-CCEEeecCCCCCCCHHHHHHHHHHHHHc
Confidence 45556678999988762221111 1122 3489999999999988754 7899999999999999999999999999
Q ss_pred CCCEEEee
Q psy2895 233 NIDILTIG 240 (293)
Q Consensus 233 ~~~~i~i~ 240 (293)
|+.-+.+-
T Consensus 105 Gaagv~iE 112 (275)
T 2ze3_A 105 GVAGVNLE 112 (275)
T ss_dssp TCSEEEEE
T ss_pred CCcEEEEC
Confidence 99998884
No 359
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=53.25 E-value=24 Score=31.56 Aligned_cols=82 Identities=17% Similarity=0.132 Sum_probs=53.4
Q ss_pred HHHHHHHHHc-CCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEe--------EEeec---CCCHHH
Q psy2895 154 NHVLKIFKQA-LPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSG--------IMVGL---GENDEE 221 (293)
Q Consensus 154 ~e~l~~l~~a-G~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~--------~ivG~---gEt~ed 221 (293)
.+.|+.++++ |++.+-+++.-.+ .....+.+++.+.-+.+.+. |+.+++. +..|. -+..+.
T Consensus 33 ~~~L~~i~q~~G~~gIe~~l~~~~-----~g~~w~~~~i~~lk~~l~~~--GL~i~~i~s~~~~~~i~~~~~~r~~~ie~ 105 (386)
T 3bdk_A 33 PVTLEEIKAIPGMQGIVTAVYDVP-----VGQAWPLENILELKKMVEEA--GLEITVIESIPVHEDIKQGKPNRDALIEN 105 (386)
T ss_dssp SSCHHHHHTSTTCCEEEECCCSSC-----SSSCCCHHHHHHHHHHHHTT--TCEEEEEECCCCCHHHHTTCTTHHHHHHH
T ss_pred HHHHHHHHhcCCCCEEEeCCcccC-----CCCCCCHHHHHHHHHHHHHc--CCEEEEEeccccccccccCcHHHHHHHHH
Confidence 4578899999 9999987653211 01123567777777778888 9976542 11111 122356
Q ss_pred HHHHHHHHHhCCCCEEEeecCC
Q psy2895 222 ILTVIHDMRNHNIDILTIGQYL 243 (293)
Q Consensus 222 ~~~~l~~l~~l~~~~i~i~~~~ 243 (293)
+.++++.+.++|+..|.++ |+
T Consensus 106 ~k~~i~~aa~lGi~~v~~n-f~ 126 (386)
T 3bdk_A 106 YKTSIRNVGAAGIPVVCYN-FM 126 (386)
T ss_dssp HHHHHHHHHTTTCCEEEEC-CC
T ss_pred HHHHHHHHHHcCCCEEEEc-Cc
Confidence 7788888899999988764 54
No 360
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=53.03 E-value=75 Score=28.66 Aligned_cols=124 Identities=10% Similarity=0.163 Sum_probs=71.7
Q ss_pred CCChhHHHHHHHH-HHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCC-CcCcHHHHHHH-HHHc
Q psy2895 87 PLDIEEPKKIAYT-INKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPD-FRNQINHVLKI-FKQA 163 (293)
Q Consensus 87 ~~~~eei~~~~~~-~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~-~~~~~~e~l~~-l~~a 163 (293)
.+++++..+..++ +.++++.. -+.| ++..+++.+..+-+.+.. .+-++..+ +.++ .+.++. +..-
T Consensus 260 ~~t~~eai~~~~~ll~~y~i~~-----IEdP-l~~dD~e~~~~L~~~~g~-----~ipI~gDE~~~tn-~~~~~~~i~~~ 327 (417)
T 3qn3_A 260 AFSSEALIERYVELCAKYPICS-----IEDG-LAENDFEGWIKLTEKLGN-----KIQLVGDDLFVTN-EDILREGIIKK 327 (417)
T ss_dssp EECHHHHHHHHHHHHHHSCEEE-----EESS-SCTTCHHHHHHHHHHHTT-----TSEEEESTTTTTC-HHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHhhcceeE-----EecC-CCcccHHHHHHHHHhhCC-----CCceecCCcccCC-HHHHHHHHHhC
Confidence 4688999998887 56665322 2322 433345555544443321 23344432 2332 333444 4333
Q ss_pred CCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec--CCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 164 LPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL--GENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 164 G~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~--gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
.+|.+.+.+ .+-.+.-+.+++++.++++ |+. +|+|+ |||...+..+ +.-.++...+-..
T Consensus 328 a~d~i~iKv----------~qiGGiTea~kia~lA~~~--G~~----v~vsh~sgEt~d~~iad--lava~~~~~ik~G 388 (417)
T 3qn3_A 328 MANAVLIKP----------NQIGTITQTMRTVRLAQRN--NYK----CVMSHRSGESEDAFIAD--FAVALNTGQIKTG 388 (417)
T ss_dssp CCSEEEECH----------HHHCSHHHHHHHHHHHHHT--TCE----EEEECCSSCCSCCHHHH--HHHHTTCSEEECC
T ss_pred CCCEEEecC----------CCCCCHHHHHHHHHHHHHc--CCe----EEEeCCCCCchHHHHHH--HHHHhCCCccccC
Confidence 467666542 2233788899999999999 884 46777 9998886554 4456677666543
No 361
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=52.97 E-value=27 Score=30.07 Aligned_cols=62 Identities=8% Similarity=0.040 Sum_probs=39.0
Q ss_pred HHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeecc
Q psy2895 96 IAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNI 172 (293)
Q Consensus 96 ~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~l 172 (293)
+++++.+.|+..|.|-- + +.+.+.+.++.+. +++.+.++ .+ ++ .+.+..+.+.|+|.+.++-
T Consensus 221 e~~eAl~aGaD~I~LDn-----~---~~~~l~~av~~i~---~~v~ieaS-GG-I~--~~~i~~~a~tGVD~isvG~ 282 (298)
T 3gnn_A 221 QLRTALAHGARSVLLDN-----F---TLDMMRDAVRVTE---GRAVLEVS-GG-VN--FDTVRAIAETGVDRISIGA 282 (298)
T ss_dssp HHHHHHHTTCEEEEEES-----C---CHHHHHHHHHHHT---TSEEEEEE-SS-CS--TTTHHHHHHTTCSEEECGG
T ss_pred HHHHHHHcCCCEEEECC-----C---CHHHHHHHHHHhC---CCCeEEEE-cC-CC--HHHHHHHHHcCCCEEEECC
Confidence 45666677888777732 2 1456666666653 33334432 23 33 5678888899999998764
No 362
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=52.97 E-value=13 Score=34.92 Aligned_cols=68 Identities=16% Similarity=0.142 Sum_probs=45.1
Q ss_pred HHHHHHHHHcCCCeeeec-c-cc-c------hHHHhhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHH
Q psy2895 154 NHVLKIFKQALPDVLNHN-I-ET-V------PRLYKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEI 222 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~-l-es-s------~~~~~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~ 222 (293)
.+.|..|++.|++.|.++ + ++ . ..-|..+.+. .+.+++.+.++.+|+. ||.|-.++++.+ +..-.-+
T Consensus 34 ~~~ldyl~~LGv~~I~l~Pi~~~~~~~~GYd~~dy~~id~~~Gt~~df~~lv~~~h~~--Gi~VilD~V~NH~s~~~~wf 111 (558)
T 1uok_A 34 ISKLDYLKELGIDVIWLSPVYESPNDDNGYDISDYCKIMNEFGTMEDWDELLHEMHER--NMKLMMDLVVNHTSDEHNWF 111 (558)
T ss_dssp HTTHHHHHHHTCCEEEECCCEECCCTTTTSSCSEEEEECGGGCCHHHHHHHHHHHHHT--TCEEEEEECCSBCCTTSHHH
T ss_pred HHHHHHHHHcCCCEEEECCcccCCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHC--CCEEEEEEecccccccchHH
Confidence 345667777777777652 2 22 1 1122234443 3889999999999999 999999999998 5443333
Q ss_pred H
Q psy2895 223 L 223 (293)
Q Consensus 223 ~ 223 (293)
.
T Consensus 112 ~ 112 (558)
T 1uok_A 112 I 112 (558)
T ss_dssp H
T ss_pred H
Confidence 3
No 363
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=52.90 E-value=1.1e+02 Score=26.40 Aligned_cols=140 Identities=8% Similarity=-0.001 Sum_probs=82.3
Q ss_pred HHHHHCCCcEEEEeee-c------CCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcC--cHHHHHHHHHHcCCCe
Q psy2895 98 YTINKLKLNYVVITSV-N------RDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRN--QINHVLKIFKQALPDV 167 (293)
Q Consensus 98 ~~~~~~G~~~i~l~gg-~------~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~--~~~e~l~~l~~aG~~~ 167 (293)
+.+.+.|++-|.++|. - .||....+.+.+...++.|.+..++..|-+=.+ |+.+ +..+.+.++.++|+..
T Consensus 53 ~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~~PviaD~d~Gyg~~~~v~~tv~~l~~aGaag 132 (318)
T 1zlp_A 53 AVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAPNLCVVVDGDTGGGGPLNVQRFIRELISAGAKG 132 (318)
T ss_dssp HHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSSSSEEEEECTTCSSSHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhccCCCEEEeCCCCCCCHHHHHHHHHHHHHcCCcE
Confidence 4445679999888763 1 244333456777788888877655555555334 5442 1245677787899998
Q ss_pred eeeccccchHHHhhcCCC--CCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCH-----HHHHHHHHHHHhCCCCEEEee
Q psy2895 168 LNHNIETVPRLYKKVRPG--SDYKHSLNLLKNFKKLYPNILTKSGIMVGLGEND-----EEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 168 i~~~less~~~~~~i~~~--~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~-----ed~~~~l~~l~~l~~~~i~i~ 240 (293)
+++-=+..++..-.+..+ .+.++..+.|+.++++ ... .-.+|.|-.+.. ++..+-.....+.|.+.+.+-
T Consensus 133 v~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A--~~~-~~~~I~ARtda~a~~gl~~ai~Ra~Ay~eAGAd~i~~e 209 (318)
T 1zlp_A 133 VFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREA--IGD-SDFFLVARTDARAPHGLEEGIRRANLYKEAGADATFVE 209 (318)
T ss_dssp EEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHH--HTT-SCCEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred EEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHh--ccc-CCcEEEEeeHHhhhcCHHHHHHHHHHHHHcCCCEEEEc
Confidence 876311121111111111 2567788888888887 321 112445544443 356666667778899988773
No 364
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=52.88 E-value=28 Score=30.19 Aligned_cols=55 Identities=16% Similarity=0.237 Sum_probs=40.2
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCC-CC-------CChhHHHHHHHHHHhhCCCcEE
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDL-HD-------GGSSHFVSCIKHIRKLSTKIKI 142 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l-~~-------~~~~~~~~ll~~i~~~~~~~~i 142 (293)
.++.+.+.++++++.++|++.|.|.|.. ... .+ .+---+...++.||+.+|++.|
T Consensus 55 r~sid~l~~~~~~~~~~Gi~~v~LFgvp-~~~~Kd~~gs~A~~~~g~v~~air~iK~~~pdl~v 117 (330)
T 1pv8_A 55 RYGVKRLEEMLRPLVEEGLRCVLIFGVP-SRVPKDERGSAADSEESPAIEAIHLLRKTFPNLLV 117 (330)
T ss_dssp EECHHHHHHHHHHHHHHTCCEEEEEECC---------------CCSHHHHHHHHHHHHSTTSEE
T ss_pred eecHHHHHHHHHHHHHCCCCEEEEecCC-cccCCCccccccCCCCChHHHHHHHHHHHCCCeEE
Confidence 3789999999999999999999988773 211 10 0112477889999999998644
No 365
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=52.81 E-value=1.1e+02 Score=26.42 Aligned_cols=76 Identities=11% Similarity=0.019 Sum_probs=51.5
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcC-CCcC-cHHHHHHHHHHcC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIP-DFRN-QINHVLKIFKQAL 164 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~-~~~~-~~~e~l~~l~~aG 164 (293)
.+++++.+.++.+.+.|++.+-+-.|.. +.+.-.+.++.+++.. +++.+.+=.+ ++.. +..+.++.|.+.|
T Consensus 143 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~------~~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~ 216 (359)
T 1mdl_A 143 DGVKLATERAVTAAELGFRAVKTRIGYP------ALDQDLAVVRSIRQAVGDDFGIMVDYNQSLDVPAAIKRSQALQQEG 216 (359)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCCS------SHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCC------CHHHHHHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHHHhC
Confidence 4678888899999999999888766642 1345678888888764 5677766444 3321 1134566777778
Q ss_pred CCeee
Q psy2895 165 PDVLN 169 (293)
Q Consensus 165 ~~~i~ 169 (293)
++.+.
T Consensus 217 i~~iE 221 (359)
T 1mdl_A 217 VTWIE 221 (359)
T ss_dssp CSCEE
T ss_pred CCeEE
Confidence 87664
No 366
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=52.80 E-value=17 Score=32.66 Aligned_cols=30 Identities=3% Similarity=-0.075 Sum_probs=27.1
Q ss_pred CCHHHHHHHHHHHHHhCCCceeeEeEEeec-CC
Q psy2895 186 SDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GE 217 (293)
Q Consensus 186 ~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gE 217 (293)
.+.++..+.++.+|++ ||.|-.++++.+ +.
T Consensus 72 G~~~d~~~lv~~~h~~--Gi~VilD~V~NH~~~ 102 (422)
T 1ua7_A 72 GTEQEFKEMCAAAEEY--GIKVIVDAVINHTTF 102 (422)
T ss_dssp EEHHHHHHHHHHHHTT--TCEEEEEECCSBCCS
T ss_pred CCHHHHHHHHHHHHHC--CCEEEEEeccCcccC
Confidence 3789999999999999 999999999988 44
No 367
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=52.73 E-value=52 Score=28.02 Aligned_cols=82 Identities=12% Similarity=0.009 Sum_probs=48.8
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeec--CCCCCCCChhHHHHHHHHHHhhCC-CcEEEEEcCCCcC-cHHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVN--RDDLHDGGSSHFVSCIKHIRKLST-KIKIEILIPDFRN-QINHVLKIFK 161 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~--~~~l~~~~~~~~~~ll~~i~~~~~-~~~i~~~~~~~~~-~~~e~l~~l~ 161 (293)
..++.+.+.+.++.+.+.|+..+++.|.. .+.+ +.+.-.++++.+.+... .+.+-+.+.+... +..+..+...
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~L---s~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~ 92 (294)
T 2ehh_A 16 GEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTL---TFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAK 92 (294)
T ss_dssp TEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGS---CHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHCCCCEEEECccccChhhC---CHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHH
Confidence 45788888999999888999988876643 2333 34555666666655422 2333333321111 1134455556
Q ss_pred HcCCCeeee
Q psy2895 162 QALPDVLNH 170 (293)
Q Consensus 162 ~aG~~~i~~ 170 (293)
++|+|.+.+
T Consensus 93 ~~Gadavlv 101 (294)
T 2ehh_A 93 EVGADGALV 101 (294)
T ss_dssp HTTCSEEEE
T ss_pred hcCCCEEEE
Confidence 679888754
No 368
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=52.67 E-value=66 Score=27.03 Aligned_cols=131 Identities=12% Similarity=-0.035 Sum_probs=73.0
Q ss_pred CCChhHHHHHHHHHHHC--CCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcC
Q psy2895 87 PLDIEEPKKIAYTINKL--KLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQAL 164 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~--G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG 164 (293)
.++.+++.+.++...+. ++..+.=..|.. + ..+......+++.+++++ +-+.-+.+..+. -.-+.-++.|
T Consensus 106 ~~s~~ei~~~l~~al~~vP~a~GvnNHmGS~--~-T~~~~~M~~vm~~L~~~g----L~FlDS~Ts~~S-~a~~~A~~~g 177 (261)
T 2qv5_A 106 GDPAKVNIDRLHRSMAKITNYTGVMNYLGGR--F-LAEQSALEPVMRDIGKRG----LLFLDDGSSAQS-LSGGIAKAIS 177 (261)
T ss_dssp TSCHHHHHHHHHHHHTTCCCCSEEEEEECTT--G-GGCHHHHHHHHHHHHHTT----CEEEECSCCTTC-CHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHCCCcEEEecccccc--h-hcCHHHHHHHHHHHHHCC----CEEEcCCCCccc-HHHHHHHHcC
Confidence 47899999999888764 555554444432 2 223456777888888762 323222221110 0112233568
Q ss_pred CCeee--ecccc--c-hHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec--CCCHHHHHHHHHHHHhCCCCEE
Q psy2895 165 PDVLN--HNIET--V-PRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL--GENDEEILTVIHDMRNHNIDIL 237 (293)
Q Consensus 165 ~~~i~--~~les--s-~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~--gEt~ed~~~~l~~l~~l~~~~i 237 (293)
+..+. +-++. + +.+ ..+..+.++.+++. |.. +.+|+ -+|.+-+.+.+..+++-|+..+
T Consensus 178 vp~~~rdvFLD~~~~~~~I---------~~qL~~a~~~Ar~~--G~A----IaIGhp~p~Ti~aL~~~~~~l~~~gi~LV 242 (261)
T 2qv5_A 178 APQGFADVLLDGEVTEASI---------LRKLDDLERIARRN--GQA----IGVASAFDESIAAISKWSREAGGRGIEIV 242 (261)
T ss_dssp CCEEECSEETTSSCSHHHH---------HHHHHHHHHHHHHH--SEE----EEEEECCHHHHHHHHHHHHHGGGGTEEEC
T ss_pred CCeEEeeeecCCCCCHHHH---------HHHHHHHHHHHHhc--CcE----EEEeCCCHHHHHHHHHHhhhhhhCCeEEE
Confidence 87765 33332 1 122 23345666778888 653 56777 5666666666656666677777
Q ss_pred Eee
Q psy2895 238 TIG 240 (293)
Q Consensus 238 ~i~ 240 (293)
+++
T Consensus 243 pvS 245 (261)
T 2qv5_A 243 GVS 245 (261)
T ss_dssp CHH
T ss_pred EHH
Confidence 665
No 369
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=52.63 E-value=64 Score=26.03 Aligned_cols=97 Identities=14% Similarity=0.080 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeec
Q psy2895 92 EPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHN 171 (293)
Q Consensus 92 ei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~ 171 (293)
...+.++.+.+.|+..|.+++.++.... .+. -.+.++.+++.. ++.+-+ ..|..+ .+.+..+.++|++.+.++
T Consensus 155 ~~~e~~~~~~~~G~d~i~~~~~~~~g~~-~~~--~~~~i~~l~~~~-~~pvia-~GGi~~--~~~~~~~~~~Ga~~v~vg 227 (253)
T 1h5y_A 155 DAVKWAKEVEELGAGEILLTSIDRDGTG-LGY--DVELIRRVADSV-RIPVIA-SGGAGR--VEHFYEAAAAGADAVLAA 227 (253)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTTTTC-SCC--CHHHHHHHHHHC-SSCEEE-ESCCCS--HHHHHHHHHTTCSEEEES
T ss_pred CHHHHHHHHHhCCCCEEEEecccCCCCc-CcC--CHHHHHHHHHhc-CCCEEE-eCCCCC--HHHHHHHHHcCCcHHHHH
Confidence 4455667777889999988876532111 111 124555665543 233322 235544 466677778999998876
Q ss_pred cccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCcee
Q psy2895 172 IETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILT 207 (293)
Q Consensus 172 less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~ 207 (293)
..+++ .+.+.++ ..+.+++. |+.+
T Consensus 228 ----sal~~---~~~~~~~---~~~~l~~~--g~~~ 251 (253)
T 1h5y_A 228 ----SLFHF---RVLSIAQ---VKRYLKER--GVEV 251 (253)
T ss_dssp ----HHHHT---TSSCHHH---HHHHHHHT--TCBC
T ss_pred ----HHHHc---CCCCHHH---HHHHHHHc--CCCC
Confidence 23332 2234444 44456666 7754
No 370
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=52.58 E-value=84 Score=25.95 Aligned_cols=81 Identities=10% Similarity=0.210 Sum_probs=44.6
Q ss_pred HHHHHHHHHcCCCeeeeccccc---------h-HHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHH
Q psy2895 154 NHVLKIFKQALPDVLNHNIETV---------P-RLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEIL 223 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less---------~-~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~ 223 (293)
.+.++.+.++|+|.+.++.--+ + ...+.+..+.+.+..++.++.+++. .++++. +| .-....+.
T Consensus 35 ~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~-~~~Pv~--~m---~~~~~~~~ 108 (262)
T 1rd5_A 35 AEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE-LSCPVV--LL---SYYKPIMF 108 (262)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG-CSSCEE--EE---CCSHHHHS
T ss_pred HHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCEE--EE---ecCcHHHH
Confidence 5667778888999988863211 1 1122233456788888888888775 244421 11 11111111
Q ss_pred HHHHHHHhCCCCEEEee
Q psy2895 224 TVIHDMRNHNIDILTIG 240 (293)
Q Consensus 224 ~~l~~l~~l~~~~i~i~ 240 (293)
..++.+.+.|++.+.+.
T Consensus 109 ~~~~~a~~aGadgv~v~ 125 (262)
T 1rd5_A 109 RSLAKMKEAGVHGLIVP 125 (262)
T ss_dssp CCTHHHHHTTCCEEECT
T ss_pred HHHHHHHHcCCCEEEEc
Confidence 22233677788877663
No 371
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=52.42 E-value=1.3e+02 Score=26.78 Aligned_cols=128 Identities=15% Similarity=0.143 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeec
Q psy2895 92 EPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHN 171 (293)
Q Consensus 92 ei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~ 171 (293)
+..+.++.+.+.|+..|.+..+.. +.+.+.++++.+++..|+..+-+ ++..+ .+.++.+.++|+|.+.++
T Consensus 153 ~~~~~a~~~~~~G~d~i~i~~~~g------~~~~~~e~i~~ir~~~~~~pviv--~~v~~--~~~a~~a~~~Gad~I~vg 222 (404)
T 1eep_A 153 DTIERVEELVKAHVDILVIDSAHG------HSTRIIELIKKIKTKYPNLDLIA--GNIVT--KEAALDLISVGADCLKVG 222 (404)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCC------SSHHHHHHHHHHHHHCTTCEEEE--EEECS--HHHHHHHHTTTCSEEEEC
T ss_pred hHHHHHHHHHHCCCCEEEEeCCCC------ChHHHHHHHHHHHHHCCCCeEEE--cCCCc--HHHHHHHHhcCCCEEEEC
Confidence 345666777788999887732221 12567888999998865544443 22233 667888889999999886
Q ss_pred ccc-c-hHHHhhcCCCCCHHHHHHHHHHHHHhCC--CceeeEeEEe-ecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 172 IET-V-PRLYKKVRPGSDYKHSLNLLKNFKKLYP--NILTKSGIMV-GLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 172 les-s-~~~~~~i~~~~~~e~~l~~i~~~~~~~p--gi~~~~~~iv-G~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
.+. . ......-..+... +..+..+++..+ ++++ |. |=-.|.+|+.+.+. +|.+.+.+.
T Consensus 223 ~~~G~~~~~~~~~~~g~p~---~~~l~~v~~~~~~~~ipV----ia~GGI~~~~d~~~ala----~GAd~V~iG 285 (404)
T 1eep_A 223 IGPGSICTTRIVAGVGVPQ---ITAICDVYEACNNTNICI----IADGGIRFSGDVVKAIA----AGADSVMIG 285 (404)
T ss_dssp SSCSTTSHHHHHHCCCCCH---HHHHHHHHHHHTTSSCEE----EEESCCCSHHHHHHHHH----HTCSEEEEC
T ss_pred CCCCcCcCccccCCCCcch---HHHHHHHHHHHhhcCceE----EEECCCCCHHHHHHHHH----cCCCHHhhC
Confidence 543 2 1111111112221 233444443211 4432 22 22356778776654 588888774
No 372
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=52.41 E-value=1.1e+02 Score=26.10 Aligned_cols=89 Identities=10% Similarity=0.050 Sum_probs=53.7
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhh-CCCcEEEEEcCCCcCcHHHHHHHHHHcCC
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKL-STKIKIEILIPDFRNQINHVLKIFKQALP 165 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~-~~~~~i~~~~~~~~~~~~e~l~~l~~aG~ 165 (293)
.++.+++...++...+.|+.+|--+.|..+ .....+.+ ++++.+.+. .+.+.|+.. .|..+ .+.+..+-++|.
T Consensus 184 ~Lt~eei~~A~~ia~eaGADfVKTSTGf~~--~GAT~edv-~lmr~~v~~~g~~v~VKAA-GGIrt--~edAl~mi~aGA 257 (288)
T 3oa3_A 184 QLTADEIIAGCVLSSLAGADYVKTSTGFNG--PGASIENV-SLMSAVCDSLQSETRVKAS-GGIRT--IEDCVKMVRAGA 257 (288)
T ss_dssp GCCHHHHHHHHHHHHHTTCSEEECCCSSSS--CCCCHHHH-HHHHHHHHHSSSCCEEEEE-SSCCS--HHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEcCCCCCC--CCCCHHHH-HHHHHHHHHhCCCceEEEe-CCCCC--HHHHHHHHHcCC
Confidence 478899988888888999999865544321 12224454 445554432 334666664 24444 455566667999
Q ss_pred CeeeeccccchHHHhhcC
Q psy2895 166 DVLNHNIETVPRLYKKVR 183 (293)
Q Consensus 166 ~~i~~~less~~~~~~i~ 183 (293)
+++-.+ +...+++..+
T Consensus 258 ~RiGtS--~g~~I~~~~~ 273 (288)
T 3oa3_A 258 ERLGAS--AGVKIVNETR 273 (288)
T ss_dssp SEEEES--CHHHHHHHHT
T ss_pred ceeehh--hHHHHHHHHH
Confidence 986532 3356666653
No 373
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=52.35 E-value=1.2e+02 Score=26.70 Aligned_cols=124 Identities=12% Similarity=0.074 Sum_probs=73.9
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcC-CCcC-cHHHHHHHHHHcC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIP-DFRN-QINHVLKIFKQAL 164 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~-~~~~-~~~e~l~~l~~aG 164 (293)
.+++++.+.++.+.+.|++.+-+--|. +.+.-.+.++.+++.. +++.+.+=.+ ++.. +..+.++.|.+.|
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~iKiKvG~-------~~~~d~~~v~avR~a~g~d~~l~vDan~~~~~~~A~~~~~~l~~~~ 222 (389)
T 3ozy_A 150 LTPDQAADELAGWVEQGFTAAKLKVGR-------APRKDAANLRAMRQRVGADVEILVDANQSLGRHDALAMLRILDEAG 222 (389)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCS-------CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHCCCCEEeeccCC-------CHHHHHHHHHHHHHHcCCCceEEEECCCCcCHHHHHHHHHHHHhcC
Confidence 578999999999999999988775443 1355667888888764 6677766444 3322 1134567787888
Q ss_pred CCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHH-HhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 165 PDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFK-KLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 165 ~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~-~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
++.+.=++. ..++ +.++.++ +.. ++++. .+|+..+..+..+.++.-.++.+.+.
T Consensus 223 i~~iEqP~~-----------~~d~----~~~~~l~~~~~-~iPIa------~dE~i~~~~~~~~~i~~~~~d~v~ik 277 (389)
T 3ozy_A 223 CYWFEEPLS-----------IDDI----EGHRILRAQGT-PVRIA------TGENLYTRNAFNDYIRNDAIDVLQAD 277 (389)
T ss_dssp CSEEESCSC-----------TTCH----HHHHHHHTTCC-SSEEE------ECTTCCHHHHHHHHHHTTCCSEECCC
T ss_pred CCEEECCCC-----------cccH----HHHHHHHhcCC-CCCEE------eCCCCCCHHHHHHHHHcCCCCEEEeC
Confidence 887753321 1122 3344454 321 33322 25555555555555555567766553
No 374
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=51.93 E-value=82 Score=25.72 Aligned_cols=41 Identities=17% Similarity=0.028 Sum_probs=25.4
Q ss_pred HHHHH-HHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 190 HSLNL-LKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 190 ~~l~~-i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
..++. +..+++. |+.+ |+---||.+++ +.++++|++.+.=+
T Consensus 196 ~~~~~i~~~a~~~--g~~v----iaeGVEt~~~~----~~l~~lG~~~~QG~ 237 (259)
T 3s83_A 196 KIVRSVVKLGQDL--DLEV----VAEGVENAEMA----HALQSLGCDYGQGF 237 (259)
T ss_dssp HHHHHHHHHHHHT--TCEE----EECCCCSHHHH----HHHHHHTCCEECBT
T ss_pred HHHHHHHHHHHHC--CCeE----EEEeCCCHHHH----HHHHhcCCCEeecC
Confidence 34444 4556667 7754 22224777664 67788999987554
No 375
>2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A*
Probab=51.90 E-value=40 Score=31.27 Aligned_cols=56 Identities=14% Similarity=0.090 Sum_probs=39.6
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCC-CCCHHHHHHHHHHHHHhCCCceeeEeEEe
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRP-GSDYKHSLNLLKNFKKLYPNILTKSGIMV 213 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~-~~~~e~~l~~i~~~~~~~pgi~~~~~~iv 213 (293)
...|+.||.+|++.|.+.+ -=-+-+.-.+ .+++.-+.+..+.++++ |+++.+-|=+
T Consensus 34 ~a~L~~LK~~GVdGVmvDV--WWGiVE~~~P~~YdWsgY~~L~~mvr~~--GLKlq~vmSF 90 (535)
T 2xfr_A 34 RAQLRKLVEAGVDGVMVDV--WWGLVEGKGPKAYDWSAYKQLFELVQKA--GLKLQAIMSF 90 (535)
T ss_dssp HHHHHHHHHTTCCEEEEEE--EHHHHTCSSTTCCCCHHHHHHHHHHHHT--TCEEEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEEe--EeeeeccCCCCccCcHHHHHHHHHHHHc--CCeEEEEEEe
Confidence 6679999999999987643 1112222222 56999999999999999 9987554433
No 376
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=51.81 E-value=86 Score=24.69 Aligned_cols=116 Identities=16% Similarity=0.247 Sum_probs=66.4
Q ss_pred HHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEE--EcCCCcCcHHHHHHHHHHcCCCeeeecccc
Q psy2895 97 AYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEI--LIPDFRNQINHVLKIFKQALPDVLNHNIET 174 (293)
Q Consensus 97 ~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~--~~~~~~~~~~e~l~~l~~aG~~~i~~~les 174 (293)
++.+.+.|+..+.+.+. + . .+.+.++++.+++.. ..+-+ .++. +..+.++.+.++|++.+.+..-.
T Consensus 70 ~~~~~~~Gad~v~v~~~-~----~--~~~~~~~~~~~~~~g--~~~~v~~~~~~---t~~~~~~~~~~~g~d~i~v~~g~ 137 (211)
T 3f4w_A 70 SQLLFDAGADYVTVLGV-T----D--VLTIQSCIRAAKEAG--KQVVVDMICVD---DLPARVRLLEEAGADMLAVHTGT 137 (211)
T ss_dssp HHHHHHTTCSEEEEETT-S----C--HHHHHHHHHHHHHHT--CEEEEECTTCS---SHHHHHHHHHHHTCCEEEEECCH
T ss_pred HHHHHhcCCCEEEEeCC-C----C--hhHHHHHHHHHHHcC--CeEEEEecCCC---CHHHHHHHHHHcCCCEEEEcCCC
Confidence 67778889998877422 1 1 256677888888763 33333 2232 11467788888999987654110
Q ss_pred chHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 175 VPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 175 s~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
..... . ..+ ++.++.+++..|++++ +++.|=+.+ ++..+.+.|.+.+-+.
T Consensus 138 ~g~~~---~-~~~----~~~i~~l~~~~~~~~i----~~~gGI~~~----~~~~~~~~Gad~vvvG 187 (211)
T 3f4w_A 138 DQQAA---G-RKP----IDDLITMLKVRRKARI----AVAGGISSQ----TVKDYALLGPDVVIVG 187 (211)
T ss_dssp HHHHT---T-CCS----HHHHHHHHHHCSSCEE----EEESSCCTT----THHHHHTTCCSEEEEC
T ss_pred ccccc---C-CCC----HHHHHHHHHHcCCCcE----EEECCCCHH----HHHHHHHcCCCEEEEC
Confidence 11111 1 112 4556677776555543 444444443 3444567899988775
No 377
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=51.75 E-value=55 Score=27.70 Aligned_cols=141 Identities=13% Similarity=0.153 Sum_probs=78.4
Q ss_pred ChhHHHHHHHHHHH-CCCcEEEEeeecCC-----CCCCCChhHHHHHHHHHHhhC-CCcEEEEEcCCCcCcHHHHHHHHH
Q psy2895 89 DIEEPKKIAYTINK-LKLNYVVITSVNRD-----DLHDGGSSHFVSCIKHIRKLS-TKIKIEILIPDFRNQINHVLKIFK 161 (293)
Q Consensus 89 ~~eei~~~~~~~~~-~G~~~i~l~gg~~~-----~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~~~~~~~~e~l~~l~ 161 (293)
++++..+.++.+.+ .|++.|.+.-+.+. +-...+.+.+.++++.+++.. -.+.+++. ++..+ ..+.++.+.
T Consensus 109 ~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~-~~~~~-~~~~a~~l~ 186 (311)
T 1ep3_A 109 EEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLS-PNVTD-IVPIAKAVE 186 (311)
T ss_dssp SHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEEC-SCSSC-SHHHHHHHH
T ss_pred CHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEEC-CChHH-HHHHHHHHH
Confidence 47788888877776 78887766543221 000113466789999998763 11233332 33322 267788999
Q ss_pred HcCCCeeeec-cc--------cchHHHh----hcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecC-CCHHHHHHHHH
Q psy2895 162 QALPDVLNHN-IE--------TVPRLYK----KVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLG-ENDEEILTVIH 227 (293)
Q Consensus 162 ~aG~~~i~~~-le--------ss~~~~~----~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~g-Et~ed~~~~l~ 227 (293)
++|+|.+.+. .. +....+. .+.....+...++.++.+++.. ++ .+|.+-| .|.+++.+.+.
T Consensus 187 ~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~-~i----pvia~GGI~~~~d~~~~l~ 261 (311)
T 1ep3_A 187 AAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDV-DI----PIIGMGGVANAQDVLEMYM 261 (311)
T ss_dssp HTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTC-SS----CEEECSSCCSHHHHHHHHH
T ss_pred HcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhc-CC----CEEEECCcCCHHHHHHHHH
Confidence 9999998872 11 1000000 0110111222356677777652 23 3344334 57888777654
Q ss_pred HHHhCCCCEEEee
Q psy2895 228 DMRNHNIDILTIG 240 (293)
Q Consensus 228 ~l~~l~~~~i~i~ 240 (293)
.|.+.+.+.
T Consensus 262 ----~GAd~V~vg 270 (311)
T 1ep3_A 262 ----AGASAVAVG 270 (311)
T ss_dssp ----HTCSEEEEC
T ss_pred ----cCCCEEEEC
Confidence 589988885
No 378
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=51.72 E-value=75 Score=27.59 Aligned_cols=130 Identities=12% Similarity=0.111 Sum_probs=67.6
Q ss_pred HHHHHHHHCCCcEEEEeee-------cCCCCCCCCh-hHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCC
Q psy2895 95 KIAYTINKLKLNYVVITSV-------NRDDLHDGGS-SHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPD 166 (293)
Q Consensus 95 ~~~~~~~~~G~~~i~l~gg-------~~~~l~~~~~-~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~ 166 (293)
+.++.+.++|++.+.+|-. ...+ .+.++ +.=.++++++.+. ++-|-+. ..+. ....+.+.-+...
T Consensus 103 ~~l~~~y~lGvR~~~Lt~n~~N~~~~g~~~-~~~GLT~~G~~vV~emnrl--GmivDlS---H~s~-~~~~dvl~~s~~P 175 (325)
T 2i5g_A 103 GYVEVFKQLGVGIVQMCYNTQNLVGTGCYE-RDGGLSGFGREIVAEMNRV--GIMCDLS---HVGS-KTSEEVILESKKP 175 (325)
T ss_dssp HHHHHHHHTTEEEEESCCSSBCSSCBBTTS-CCCCCCHHHHHHHHHHHHH--TCEEECT---TBCH-HHHHHHHHHCSSC
T ss_pred HHHHHHHHcCCeEEEeeccCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHc--CcEEEcC---cCCH-HHHHHHHHHhCCC
Confidence 3567778889998888621 1111 11222 3345677888776 3334332 1221 2233333222221
Q ss_pred -eeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-----CCCHHHHHHHHHHHHh-CCCCEEEe
Q psy2895 167 -VLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-----GENDEEILTVIHDMRN-HNIDILTI 239 (293)
Q Consensus 167 -~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-----gEt~ed~~~~l~~l~~-l~~~~i~i 239 (293)
.++++ ....+.+ -.|..+ + +.++.+.+. |--+...+.-++ .-|.+++.++++.+.+ .|++++.+
T Consensus 176 vi~SHs--n~~al~~-h~RNl~-D---e~irala~~--GGvigv~~~~~fl~~~~~~t~~~~~~hi~~i~~~~G~dhVgi 246 (325)
T 2i5g_A 176 VCYSHC--LPSGLKE-HPRNKS-D---EELKFIADH--GGFVGVTMFAPFLKKGIDSTIDDYAEAIEYVMNIVGEDAIGI 246 (325)
T ss_dssp CEEEEE--CBTTTCC-CTTSBC-H---HHHHHHHHT--TCEEEECCCGGGSSSGGGCBHHHHHHHHHHHHHHHCTTSEEE
T ss_pred EEEeCC--CccccCC-CCCCCC-H---HHHHHHHHc--CCeEEEeecchhcCCCCCCCHHHHHHHHHHHHHhcCCceEEE
Confidence 22332 1122211 112222 3 345566666 665655554444 3679999999999876 58999888
Q ss_pred e
Q psy2895 240 G 240 (293)
Q Consensus 240 ~ 240 (293)
.
T Consensus 247 G 247 (325)
T 2i5g_A 247 G 247 (325)
T ss_dssp C
T ss_pred C
Confidence 6
No 379
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=51.36 E-value=97 Score=26.58 Aligned_cols=69 Identities=10% Similarity=0.124 Sum_probs=42.6
Q ss_pred HHHHHHHHHHhhCCCcEEEEEcC--CCc-CcHHHHHHHHH-HcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHH
Q psy2895 125 HFVSCIKHIRKLSTKIKIEILIP--DFR-NQINHVLKIFK-QALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKK 200 (293)
Q Consensus 125 ~~~~ll~~i~~~~~~~~i~~~~~--~~~-~~~~e~l~~l~-~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~ 200 (293)
.+.+.++.++...|++ |.+..+ +.. .+..+....++ +.|+..+.+= -+++.+.++..+.+..+++
T Consensus 40 ~l~~~~~~l~~l~p~f-vsVT~gagg~~r~~t~~~a~~i~~~~g~~~v~Hl----------tc~~~~~~~l~~~L~~~~~ 108 (304)
T 3fst_A 40 TLWNSIDRLSSLKPKF-VSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHL----------TCIDATPDELRTIARDYWN 108 (304)
T ss_dssp HHHHHHHHHHTTCCSE-EEECCCTTSSCHHHHHHHHHHHHHHHCCCEEEEE----------ESTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCE-EEEeeCCCCcchhHHHHHHHHHHHHhCCCeeEEe----------ecCCCCHHHHHHHHHHHHH
Confidence 3556677777766664 555432 221 11134455554 3687776542 2467788999999999999
Q ss_pred hCCCce
Q psy2895 201 LYPNIL 206 (293)
Q Consensus 201 ~~pgi~ 206 (293)
. |+.
T Consensus 109 ~--GI~ 112 (304)
T 3fst_A 109 N--GIR 112 (304)
T ss_dssp T--TCC
T ss_pred C--CCC
Confidence 8 983
No 380
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=51.35 E-value=1e+02 Score=25.47 Aligned_cols=132 Identities=14% Similarity=0.143 Sum_probs=81.0
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEc--C-CCcCc---HHHHHHHH
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILI--P-DFRNQ---INHVLKIF 160 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~--~-~~~~~---~~e~l~~l 160 (293)
..+.++|.+.++++.+.|+..|++. |. ++...-+.++. .++.+-... | |.... +.|.-+.+
T Consensus 39 ~~t~~~i~~lc~eA~~~~~~aVcV~----p~-------~v~~a~~~L~~--s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai 105 (239)
T 3ngj_A 39 DATEEQIRKLCSEAAEYKFASVCVN----PT-------WVPLCAELLKG--TGVKVCTVIGFPLGATPSEVKAYETKVAV 105 (239)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEEEC----GG-------GHHHHHHHHTT--SSCEEEEEESTTTCCSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEEC----HH-------HHHHHHHHhCC--CCCeEEEEeccCCCCCchHHHHHHHHHHH
Confidence 4678999999999999999998873 21 22222233322 123333222 3 32221 13333344
Q ss_pred HHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhCCCCEEEe
Q psy2895 161 KQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNHNIDILTI 239 (293)
Q Consensus 161 ~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l~~~~i~i 239 (293)
+.|.|.+.+-+... .+. ..+++.+++-++.++++.++..+. +|+=- --|++++....+...+.|.|+|-.
T Consensus 106 -~~GAdEIDmViNig-~lk-----~g~~~~v~~eI~~v~~a~~~~~lK--VIlEt~~Lt~eei~~a~~ia~~aGADfVKT 176 (239)
T 3ngj_A 106 -EQGAEEVDMVINIG-MVK-----AKKYDDVEKDVKAVVDASGKALTK--VIIECCYLTNEEKVEVCKRCVAAGAEYVKT 176 (239)
T ss_dssp -HTTCSEEEEECCHH-HHH-----TTCHHHHHHHHHHHHHHHTTSEEE--EECCGGGSCHHHHHHHHHHHHHHTCSEEEC
T ss_pred -HcCCCEEEEEeehH-Hhc-----cccHHHHHHHHHHHHHHhcCCceE--EEEecCCCCHHHHHHHHHHHHHHCcCEEEC
Confidence 46999987654321 111 457788888888888876565333 34422 247889999999999999999977
Q ss_pred e
Q psy2895 240 G 240 (293)
Q Consensus 240 ~ 240 (293)
+
T Consensus 177 S 177 (239)
T 3ngj_A 177 S 177 (239)
T ss_dssp C
T ss_pred C
Confidence 5
No 381
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=51.30 E-value=58 Score=27.67 Aligned_cols=81 Identities=9% Similarity=0.020 Sum_probs=50.4
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeec--CCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcCCC-cCcHHHHHHHHHH
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVN--RDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIPDF-RNQINHVLKIFKQ 162 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~--~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~~~-~~~~~e~l~~l~~ 162 (293)
.++.+.+.+.++.+.+.|+..+++.|.. .+.+ +.+.-.++++.+.+.. ..+.+-+.+... ..+..+..+...+
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~L---t~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~ 95 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTL---TTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKA 95 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGS---CHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccccccC---CHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHH
Confidence 6888999999999999999998886654 3333 3455566666665542 233343333211 1112445556667
Q ss_pred cCCCeeee
Q psy2895 163 ALPDVLNH 170 (293)
Q Consensus 163 aG~~~i~~ 170 (293)
+|+|.+.+
T Consensus 96 ~Gadavlv 103 (292)
T 3daq_A 96 LGADAIML 103 (292)
T ss_dssp HTCSEEEE
T ss_pred cCCCEEEE
Confidence 89998765
No 382
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=51.17 E-value=45 Score=27.09 Aligned_cols=43 Identities=19% Similarity=0.189 Sum_probs=22.5
Q ss_pred HHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeee
Q psy2895 126 FVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNH 170 (293)
Q Consensus 126 ~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~ 170 (293)
+.+.++.+++.+-+ .|++..+.-. ...+..+.++++|+....+
T Consensus 17 ~~~~l~~~~~~G~~-~vEl~~~~~~-~~~~~~~~l~~~gl~~~~~ 59 (260)
T 1k77_A 17 FIERFAAARKAGFD-AVEFLFPYNY-STLQIQKQLEQNHLTLALF 59 (260)
T ss_dssp GGGHHHHHHHHTCS-EEECSCCTTS-CHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhCCC-EEEecCCCCC-CHHHHHHHHHHcCCceEEE
Confidence 33455555555322 5666555212 2255666677777765443
No 383
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=51.13 E-value=27 Score=29.35 Aligned_cols=68 Identities=16% Similarity=0.104 Sum_probs=38.5
Q ss_pred HHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcCcHHHHHHHHHHcCCCeeeecc
Q psy2895 94 KKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRNQINHVLKIFKQALPDVLNHNI 172 (293)
Q Consensus 94 ~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~~~~e~l~~l~~aG~~~i~~~l 172 (293)
.+.++.+.++|++.|.-+||. +... .+.+.+.+++ +.. + ++.++.. |... +-+..+.+.|++.++.+.
T Consensus 131 ~~ale~L~~lG~~rILTSG~~-~~a~-~g~~~L~~Lv----~~a-~-~i~Im~GgGv~~---~Ni~~l~~tGv~e~H~Sa 199 (256)
T 1twd_A 131 LYTLNNLAELGIARVLTSGQK-SDAL-QGLSKIMELI----AHR-D-APIIMAGAGVRA---ENLHHFLDAGVLEVHSSA 199 (256)
T ss_dssp HHHHHHHHHHTCCEEEECTTS-SSTT-TTHHHHHHHH----TSS-S-CCEEEEESSCCT---TTHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEECCCCC-CCHH-HHHHHHHHHH----Hhh-C-CcEEEecCCcCH---HHHHHHHHcCCCeEeECC
Confidence 444566777799998744444 3322 2344444433 333 3 6777653 5443 234444478999999763
No 384
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=50.88 E-value=42 Score=28.59 Aligned_cols=80 Identities=9% Similarity=-0.040 Sum_probs=48.8
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeec--CCCCCCCChhHHHHHHHHHHhhCC-CcEEEEEcCCCcCcHHHHH---HH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVN--RDDLHDGGSSHFVSCIKHIRKLST-KIKIEILIPDFRNQINHVL---KI 159 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~--~~~l~~~~~~~~~~ll~~i~~~~~-~~~i~~~~~~~~~~~~e~l---~~ 159 (293)
..++.+.+.+.++.+.+.|+..+++.|.. .+.+ +.+.-.++++.+.+... .+.+-+.+.+... .+.+ +.
T Consensus 17 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~L---s~~Er~~v~~~~~~~~~gr~pviaGvg~~~t--~~ai~la~~ 91 (292)
T 2ojp_A 17 GNVCRASLKKLIDYHVASGTSAIVSVGTTGESATL---NHDEHADVVMMTLDLADGRIPVIAGTGANAT--AEAISLTQR 91 (292)
T ss_dssp SCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGS---CHHHHHHHHHHHHHHHTTSSCEEEECCCSSH--HHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhC---CHHHHHHHHHHHHHHhCCCCcEEEecCCccH--HHHHHHHHH
Confidence 46889999999999999999998887654 3333 34556667766655422 2333333322111 4444 44
Q ss_pred HHHcCCCeeee
Q psy2895 160 FKQALPDVLNH 170 (293)
Q Consensus 160 l~~aG~~~i~~ 170 (293)
..++|+|.+.+
T Consensus 92 a~~~Gadavlv 102 (292)
T 2ojp_A 92 FNDSGIVGCLT 102 (292)
T ss_dssp TTTSSCSEEEE
T ss_pred HHhcCCCEEEE
Confidence 45568888754
No 385
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=50.82 E-value=1.3e+02 Score=26.43 Aligned_cols=122 Identities=16% Similarity=0.169 Sum_probs=63.9
Q ss_pred HHHHHHHhhCCCcEEEEEcC-CCcCcHHHHHHHHHHcCCCeeee-ccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCc
Q psy2895 128 SCIKHIRKLSTKIKIEILIP-DFRNQINHVLKIFKQALPDVLNH-NIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNI 205 (293)
Q Consensus 128 ~ll~~i~~~~~~~~i~~~~~-~~~~~~~e~l~~l~~aG~~~i~~-~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi 205 (293)
.+|+++.+. +..|-+.+. ..+.++...++.+.+.|.+.+-+ ...+-+..++.++ +.++..+++.+|++
T Consensus 139 ~LL~~va~~--gkPviLstGmat~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~~~~~~n--------L~ai~~lk~~f~~l 208 (349)
T 2wqp_A 139 PLIKLVASF--GKPIILSTGMNSIESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVR--------LGGMNDLSEAFPDA 208 (349)
T ss_dssp HHHHHHHTT--CSCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEECCCCSSCCGGGCC--------THHHHHHHHHCTTS
T ss_pred HHHHHHHhc--CCeEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeccCCCCCChhhcC--------HHHHHHHHHHCCCC
Confidence 456766654 334655553 22333355667777777743322 2222122222222 67788889987777
Q ss_pred eeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEeecCCCCCCCc--cccccccChhHHHHHHHHH
Q psy2895 206 LTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYLMPSRLH--LPVHRYLHPKFFEKFKKIA 268 (293)
Q Consensus 206 ~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~~~~~p~~~~--~a~~r~~~p~~~~~~~~~~ 268 (293)
+| + .-++ |.. .......-.+|.+.|-.+ +- |.... ..-..-+.|+++..+.+..
T Consensus 209 pV--g-~sdH--t~G--~~~~~AAvAlGA~iIEkH-~t-ld~a~~G~D~~~SL~p~ef~~lv~~i 264 (349)
T 2wqp_A 209 II--G-LSDH--TLD--NYACLGAVALGGSILERH-FT-DRMDRPGPDIVCSMNPDTFKELKQGA 264 (349)
T ss_dssp EE--E-EECC--SSS--SHHHHHHHHHTCCEEEEE-BC-SCTTCCSTTGGGCBCHHHHHHHHHHH
T ss_pred CE--E-eCCC--CCc--HHHHHHHHHhCCCEEEeC-CC-ccccCCCCChhhhCCHHHHHHHHHHH
Confidence 65 2 2455 111 344455567999988887 42 32111 1122236788876654443
No 386
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=50.81 E-value=1.1e+02 Score=26.78 Aligned_cols=93 Identities=18% Similarity=0.238 Sum_probs=59.5
Q ss_pred hhHHHHHHHHHHhhCC-CcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHh
Q psy2895 123 SSHFVSCIKHIRKLST-KIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKL 201 (293)
Q Consensus 123 ~~~~~~ll~~i~~~~~-~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~ 201 (293)
.+...+.++.+++... .+.+.+.. .. .+.++.+.++|++.+.++.-. + ..+.+++.++.+++.
T Consensus 80 ~e~~~~~I~~vk~~~~~pvga~ig~---~~--~e~a~~l~eaGad~I~ld~a~----------G-~~~~~~~~i~~i~~~ 143 (361)
T 3khj_A 80 MESQVNEVLKVKNSGGLRVGAAIGV---NE--IERAKLLVEAGVDVIVLDSAH----------G-HSLNIIRTLKEIKSK 143 (361)
T ss_dssp HHHHHHHHHHHHHTTCCCCEEEECT---TC--HHHHHHHHHTTCSEEEECCSC----------C-SBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCceEEEEeCC---CH--HHHHHHHHHcCcCeEEEeCCC----------C-CcHHHHHHHHHHHHh
Confidence 5677788888876531 12333322 22 578889999999998865211 2 346677888888887
Q ss_pred CCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 202 YPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 202 ~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
+ +++ +++|-..|.++ ++.+.+.|+|.+.+.
T Consensus 144 ~-~~~----Vivg~v~t~e~----A~~l~~aGaD~I~VG 173 (361)
T 3khj_A 144 M-NID----VIVGNVVTEEA----TKELIENGADGIKVG 173 (361)
T ss_dssp C-CCE----EEEEEECSHHH----HHHHHHTTCSEEEEC
T ss_pred c-CCc----EEEccCCCHHH----HHHHHHcCcCEEEEe
Confidence 4 443 34444456655 455677999998874
No 387
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=50.72 E-value=22 Score=30.43 Aligned_cols=67 Identities=10% Similarity=0.190 Sum_probs=44.9
Q ss_pred HHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeecc
Q psy2895 94 KKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNI 172 (293)
Q Consensus 94 ~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~l 172 (293)
.++++++.+.|+..|.+-- + +.+.+.+.++.++..+|.+.+.+.- |+. .+.+..+.+.|+|.+.++-
T Consensus 203 leea~eA~~aGaD~I~LDn-----~---~~e~l~~av~~l~~~~~~v~ieASG-GIt---~eni~~~a~tGVD~IsvGs 269 (285)
T 1o4u_A 203 LEDALRAVEAGADIVMLDN-----L---SPEEVKDISRRIKDINPNVIVEVSG-GIT---EENVSLYDFETVDVISSSR 269 (285)
T ss_dssp HHHHHHHHHTTCSEEEEES-----C---CHHHHHHHHHHHHHHCTTSEEEEEE-CCC---TTTGGGGCCTTCCEEEEGG
T ss_pred HHHHHHHHHcCCCEEEECC-----C---CHHHHHHHHHHhhccCCCceEEEEC-CCC---HHHHHHHHHcCCCEEEEeH
Confidence 3566667778998776632 2 2567888888887655555554432 332 4567888889999998864
No 388
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=50.70 E-value=33 Score=28.41 Aligned_cols=75 Identities=16% Similarity=0.039 Sum_probs=46.2
Q ss_pred hhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeee
Q psy2895 90 IEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLN 169 (293)
Q Consensus 90 ~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~ 169 (293)
..+..+.++.+.+.|++.+.++..+.... . .....++++.+++.. ++.+-+. .++.+ .+.++.+.++|++.+.
T Consensus 29 ~~~~~~~a~~~~~~Ga~~i~v~d~~~~~~-~--~g~~~~~i~~i~~~~-~iPvi~~-ggi~~--~~~i~~~~~~Gad~v~ 101 (266)
T 2w6r_A 29 GILLRDWVVEVEKRGAGEILLTSIDRDGT-K--SGYDTEMIRFVRPLT-TLPIIAS-GGAGK--MEHFLEAFLAGADKAL 101 (266)
T ss_dssp EEEHHHHHHHHHHHTCSEEEEEETTTSSC-S--SCCCHHHHHHHGGGC-CSCEEEE-SCCCS--THHHHHHHHHTCSEEE
T ss_pred CCCHHHHHHHHHHCCCCEEEEEecCcccC-C--CcccHHHHHHHHHhc-CCCEEEE-CCCCC--HHHHHHHHHcCCcHhh
Confidence 34567777888888999999876442111 1 112346777777653 3334332 23333 4567777789999998
Q ss_pred ec
Q psy2895 170 HN 171 (293)
Q Consensus 170 ~~ 171 (293)
++
T Consensus 102 lg 103 (266)
T 2w6r_A 102 AA 103 (266)
T ss_dssp CC
T ss_pred hh
Confidence 86
No 389
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=50.64 E-value=25 Score=30.18 Aligned_cols=67 Identities=9% Similarity=0.140 Sum_probs=42.8
Q ss_pred hhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeee
Q psy2895 90 IEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLN 169 (293)
Q Consensus 90 ~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~ 169 (293)
.+.+ ++++++.+.|+..|.|- . + +.+.+.+.++.++. .+.+.++ .|. + .+.+..+.+.|+|.+.
T Consensus 205 v~tl-~ea~eAl~aGaD~I~LD---n--~---~~~~l~~av~~~~~---~v~ieaS-GGI-t--~~~i~~~a~tGVD~Is 268 (287)
T 3tqv_A 205 VTNL-DELNQAIAAKADIVMLD---N--F---SGEDIDIAVSIARG---KVALEVS-GNI-D--RNSIVAIAKTGVDFIS 268 (287)
T ss_dssp ESSH-HHHHHHHHTTCSEEEEE---S--C---CHHHHHHHHHHHTT---TCEEEEE-SSC-C--TTTHHHHHTTTCSEEE
T ss_pred eCCH-HHHHHHHHcCCCEEEEc---C--C---CHHHHHHHHHhhcC---CceEEEE-CCC-C--HHHHHHHHHcCCCEEE
Confidence 3444 56666677788888772 2 2 24667777776653 3445443 233 3 5678888899999998
Q ss_pred ecc
Q psy2895 170 HNI 172 (293)
Q Consensus 170 ~~l 172 (293)
+|-
T Consensus 269 vGa 271 (287)
T 3tqv_A 269 VGA 271 (287)
T ss_dssp CSH
T ss_pred ECh
Confidence 863
No 390
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=50.54 E-value=1.2e+02 Score=26.02 Aligned_cols=138 Identities=8% Similarity=0.062 Sum_probs=66.8
Q ss_pred HHHCCCcEEEEeeec-------CCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcC--cHHHHHHHHHHcCCCeee
Q psy2895 100 INKLKLNYVVITSVN-------RDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRN--QINHVLKIFKQALPDVLN 169 (293)
Q Consensus 100 ~~~~G~~~i~l~gg~-------~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~--~~~e~l~~l~~aG~~~i~ 169 (293)
+.+.|++-+.++|.. .||....+.+.+..-++.|.+..++..|.+=.+ |+.+ +..+.++.+.++|+..++
T Consensus 34 ~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg~~~~v~~tv~~l~~aGaagv~ 113 (302)
T 3fa4_A 34 ALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTPVIADADTGYGGPIMVARTTEQYSRSGVAAFH 113 (302)
T ss_dssp HHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSCEEEECTTTTSSHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccCCCEEEECCCCCCCHHHHHHHHHHHHHcCCcEEE
Confidence 445688877775421 133322334555566666655433444444333 4432 124566777788888877
Q ss_pred eccccchHHHhhcC--CCCCHHHHHHHHHHHHHhC----CCceee--EeEEeecCCCHHHHHHHHHHHHhCCCCEEEe
Q psy2895 170 HNIETVPRLYKKVR--PGSDYKHSLNLLKNFKKLY----PNILTK--SGIMVGLGENDEEILTVIHDMRNHNIDILTI 239 (293)
Q Consensus 170 ~~less~~~~~~i~--~~~~~e~~l~~i~~~~~~~----pgi~~~--~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i 239 (293)
+-=+..++-.-.+. +-.+.++..+.|+.++++. |++-+. ++-.. .+..++-.+-++...+.|.|.+.+
T Consensus 114 iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~--~~gldeAi~Ra~ay~eAGAD~ifi 189 (302)
T 3fa4_A 114 IEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQ--THGYEESVARLRAARDAGADVGFL 189 (302)
T ss_dssp ECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHH--HHCHHHHHHHHHHHHTTTCSEEEE
T ss_pred ECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccc--cCCHHHHHHHHHHHHHcCCCEEee
Confidence 53222222111111 1126777777777766542 233222 22211 122344444444456678887766
No 391
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=50.50 E-value=69 Score=28.41 Aligned_cols=140 Identities=10% Similarity=0.073 Sum_probs=75.9
Q ss_pred CCCCChhHHHHHHHHH-------HHCCCcEEEEeeecC--------CCCC------CCC----hhHHHHHHHHHHhhCC-
Q psy2895 85 PDPLDIEEPKKIAYTI-------NKLKLNYVVITSVNR--------DDLH------DGG----SSHFVSCIKHIRKLST- 138 (293)
Q Consensus 85 ~~~~~~eei~~~~~~~-------~~~G~~~i~l~gg~~--------~~l~------~~~----~~~~~~ll~~i~~~~~- 138 (293)
++.++.+||.+.+++. .+.|+..|-|.+++. |... ... ...+.++++.+++..+
T Consensus 153 p~~mt~~eI~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~ 232 (377)
T 2r14_A 153 PRALETDEIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVFGP 232 (377)
T ss_dssp CEECCGGGHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCG
T ss_pred CccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHcCC
Confidence 4568888887665544 456999998888751 1110 011 2347788898887643
Q ss_pred -CcEEEEEcCCCc---------CcHHHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceee
Q psy2895 139 -KIKIEILIPDFR---------NQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTK 208 (293)
Q Consensus 139 -~~~i~~~~~~~~---------~~~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~ 208 (293)
.+.+++...+.. .+..+.++.|.++|++.++++.-+..... +... ++.++.+++.. ++++
T Consensus 233 ~~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~----~~~~----~~~~~~ik~~~-~iPv- 302 (377)
T 2r14_A 233 ERVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGD----ITYP----EGFREQMRQRF-KGGL- 302 (377)
T ss_dssp GGEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC----------CCC----TTHHHHHHHHC-CSEE-
T ss_pred CcEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCC----Ccch----HHHHHHHHHHC-CCCE-
Confidence 356666432211 11245678888999999988532211111 1111 34456666663 3332
Q ss_pred EeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 209 SGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 209 ~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
+..| |-|.++..+. +.+=+.|.|.+.
T Consensus 303 --i~~G-gi~~~~a~~~---l~~g~aD~V~ig 328 (377)
T 2r14_A 303 --IYCG-NYDAGRAQAR---LDDNTADAVAFG 328 (377)
T ss_dssp --EEES-SCCHHHHHHH---HHTTSCSEEEES
T ss_pred --EEEC-CCCHHHHHHH---HHCCCceEEeec
Confidence 2223 3355554443 344458988775
No 392
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=50.48 E-value=73 Score=27.62 Aligned_cols=70 Identities=4% Similarity=0.150 Sum_probs=44.9
Q ss_pred hhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEc-C------------CCcCc---H
Q psy2895 90 IEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILI-P------------DFRNQ---I 153 (293)
Q Consensus 90 ~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~-~------------~~~~~---~ 153 (293)
.+|.++++..=.+.|+.-+.+- |.+ .++++++.+++.+|++.+-.+. + |+++. +
T Consensus 231 ~~EAlre~~~Di~EGAD~vMVK----Pal------~YLDIi~~vk~~~p~~P~aaYqVSGEYAMikaAa~~GwiD~~~~v 300 (330)
T 1pv8_A 231 RGLALRAVDRDVREGADMLMVK----PGM------PYLDIVREVKDKHPDLPLAVYHVSGEFAMLWHGAQAGAFDLKAAV 300 (330)
T ss_dssp HHHHHHHHHHHHHTTCSBEEEE----SCG------GGHHHHHHHHHHSTTSCEEEEECHHHHHHHHHHHHTTSSCHHHHH
T ss_pred HHHHHHHHHhhHHhCCceEEEe----cCc------cHHHHHHHHHHhcCCCCeEEEEcCcHHHHHHHHHHcCCccHHHHH
Confidence 4555555555566799987764 333 2679999999998777776653 2 23332 2
Q ss_pred HHHHHHHHHcCCCeee
Q psy2895 154 NHVLKIFKQALPDVLN 169 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~ 169 (293)
.|.+..+|+||.|.|-
T Consensus 301 ~Esl~~~kRAGAd~Ii 316 (330)
T 1pv8_A 301 LEAMTAFRRAGADIII 316 (330)
T ss_dssp HHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHhcCCCEEe
Confidence 4566667777777653
No 393
>1qho_A Alpha-amylase; glycoside hydrolase, starch degradation; HET: MAL ABD; 1.70A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1qhp_A*
Probab=50.27 E-value=15 Score=35.57 Aligned_cols=35 Identities=9% Similarity=0.152 Sum_probs=29.4
Q ss_pred HhhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec
Q psy2895 179 YKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL 215 (293)
Q Consensus 179 ~~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~ 215 (293)
|..+.+. .+.+++.+.++.||+. ||.|-.++++.+
T Consensus 97 y~~idp~~Gt~~df~~Lv~~aH~~--GikVilD~V~NH 132 (686)
T 1qho_A 97 FKQIEEHFGNWTTFDTLVNDAHQN--GIKVIVDFVPNH 132 (686)
T ss_dssp EEEECTTTCCHHHHHHHHHHHHHT--TCEEEEEECTTE
T ss_pred ccccCcccCCHHHHHHHHHHHHHC--CCEEEEEecccc
Confidence 3345554 3899999999999999 999999999977
No 394
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=50.19 E-value=1.3e+02 Score=26.22 Aligned_cols=74 Identities=15% Similarity=0.131 Sum_probs=47.9
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcC-CCcC-cHH-HHHHHHHHcC
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIP-DFRN-QIN-HVLKIFKQAL 164 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~-~~~~-~~~-e~l~~l~~aG 164 (293)
+++++.+.++.+.+.|++.+-+-.|.. .+.-.+.++.+++.. |++.+.+=.+ ++.. +.. +.++.|.+.|
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~iKik~g~~-------~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~~l~~~~ 213 (369)
T 2p8b_A 141 DPENMAEEAASMIQKGYQSFKMKVGTN-------VKEDVKRIEAVRERVGNDIAIRVDVNQGWKNSANTLTALRSLGHLN 213 (369)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSC-------HHHHHHHHHHHHHHHCTTSEEEEECTTTTBSHHHHHHHHHTSTTSC
T ss_pred ChHHHHHHHHHHHHcCcCEEEEEeCCC-------HHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHHHHHHhCC
Confidence 688899999999999999888766531 355668888888764 6677776444 3332 112 3344444456
Q ss_pred CCeee
Q psy2895 165 PDVLN 169 (293)
Q Consensus 165 ~~~i~ 169 (293)
++.+.
T Consensus 214 i~~iE 218 (369)
T 2p8b_A 214 IDWIE 218 (369)
T ss_dssp CSCEE
T ss_pred CcEEE
Confidence 65543
No 395
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=50.14 E-value=36 Score=30.59 Aligned_cols=86 Identities=8% Similarity=-0.016 Sum_probs=51.4
Q ss_pred HHHHHHHHcCCCeeeecc-cc--chHHHhhc-C-C----CCCHHH----HHHHHHHHHHhCCCceeeEeEEe-----ec-
Q psy2895 155 HVLKIFKQALPDVLNHNI-ET--VPRLYKKV-R-P----GSDYKH----SLNLLKNFKKLYPNILTKSGIMV-----GL- 215 (293)
Q Consensus 155 e~l~~l~~aG~~~i~~~l-es--s~~~~~~i-~-~----~~~~e~----~l~~i~~~~~~~pgi~~~~~~iv-----G~- 215 (293)
+..++.+++|+|.|.+.. -+ ....+.-. + | +.+++. .+++++.++++.+.-.+..-+=. |+
T Consensus 175 ~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslenR~rf~~Eiv~aVr~avg~~~V~vRls~~~~~~g~~ 254 (402)
T 2hsa_B 175 RSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLANRCKFITQVVQAVVSAIGADRVGVRVSPAIDHLDAM 254 (402)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECSSCCSTTCC
T ss_pred HHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhhhhHHHHHHHHHHHHHhCCCcEEEEeccccccCCCC
Confidence 445566778999988754 12 13333222 1 1 235544 46777777776532233222211 22
Q ss_pred -CCCHHHHHHHHHHHHhCC------CCEEEee
Q psy2895 216 -GENDEEILTVIHDMRNHN------IDILTIG 240 (293)
Q Consensus 216 -gEt~ed~~~~l~~l~~l~------~~~i~i~ 240 (293)
+++.++..+.++.+.+.| ++.+.++
T Consensus 255 ~~~~~~~~~~la~~le~~G~~gg~~vd~i~v~ 286 (402)
T 2hsa_B 255 DSNPLSLGLAVVERLNKIQLHSGSKLAYLHVT 286 (402)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHTSCCSEEEEE
T ss_pred CCCCHHHHHHHHHHHHhcCCccCCceEEEEEe
Confidence 356788899999999999 9999886
No 396
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=50.14 E-value=1.2e+02 Score=25.74 Aligned_cols=139 Identities=9% Similarity=-0.010 Sum_probs=67.1
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCC-CChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCC
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHD-GGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALP 165 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~-~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~ 165 (293)
.++.++++..++...+ |++...+. .+.|.... .+.+...+...++-+.+ --.|++--.. ...+.++.+.++|+
T Consensus 59 ~vTldemi~h~~aV~r-~~~~~~vv-aD~pfgsy~~s~~~a~~na~rl~kaG-a~aVklEdg~---e~~~~I~al~~agI 132 (275)
T 1o66_A 59 PVSLRDMCYHTECVAR-GAKNAMIV-SDLPFGAYQQSKEQAFAAAAELMAAG-AHMVKLEGGV---WMAETTEFLQMRGI 132 (275)
T ss_dssp TCCHHHHHHHHHHHHH-HCSSSEEE-EECCTTSSSSCHHHHHHHHHHHHHTT-CSEEEEECSG---GGHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHh-hCCCCeEE-EECCCCCccCCHHHHHHHHHHHHHcC-CcEEEECCcH---HHHHHHHHHHHcCC
Confidence 5889999988887765 34432233 33221111 12333333333333332 1256653221 12578899999998
Q ss_pred Cee-eecccc-c---hHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 166 DVL-NHNIET-V---PRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 166 ~~i-~~~les-s---~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
..+ ++++.. + ..-|+.+.|....++.++-.+.+.++ |.. +-++-+. ..+. .+ ...+++.+..+.|.
T Consensus 133 pV~gHiGLtPQs~~~~ggf~v~grt~~a~~~i~rA~a~~eA--GA~--~ivlE~v--p~~~-a~--~it~~l~iP~igIG 203 (275)
T 1o66_A 133 PVCAHIGLTPQSVFAFGGYKVQGRGGKAQALLNDAKAHDDA--GAA--VVLMECV--LAEL-AK--KVTETVSCPTIGIG 203 (275)
T ss_dssp CEEEEEESCGGGTTC-----------CHHHHHHHHHHHHHT--TCS--EEEEESC--CHHH-HH--HHHHHCSSCEEEES
T ss_pred CeEeeeccCceeecccCCeEEEeChHHHHHHHHHHHHHHHc--CCc--EEEEecC--CHHH-HH--HHHHhCCCCEEEEC
Confidence 776 446532 2 22344444443456677777777777 662 1222232 3332 22 33456777667664
No 397
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=49.92 E-value=65 Score=28.49 Aligned_cols=78 Identities=17% Similarity=0.266 Sum_probs=53.1
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCC--CCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHh
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRP--GSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRN 231 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~--~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~ 231 (293)
++..+....+|.|.+.+.+....+. +.+ ..+++.|++.++++++.. ++++..-. +|+|-+.++ +..+.+
T Consensus 158 e~~~~~ve~~~adal~ihln~~qe~---~~p~Gd~~~~~~~~~I~~l~~~~-~~PVivK~-vg~g~s~e~----A~~l~~ 228 (365)
T 3sr7_A 158 QAGLQAVRDLQPLFLQVHINLMQEL---LMPEGEREFRSWKKHLSDYAKKL-QLPFILKE-VGFGMDVKT----IQTAID 228 (365)
T ss_dssp HHHHHHHHHHCCSCEEEEECHHHHH---TSSSSCCCCHHHHHHHHHHHHHC-CSCEEEEE-CSSCCCHHH----HHHHHH
T ss_pred HHHHHHHHhcCCCEEEEeccccccc---cCCCCCCcHHHHHHHHHHHHHhh-CCCEEEEE-CCCCCCHHH----HHHHHH
Confidence 4455556577999988776543332 333 236788999999999874 56665553 577788765 455677
Q ss_pred CCCCEEEee
Q psy2895 232 HNIDILTIG 240 (293)
Q Consensus 232 l~~~~i~i~ 240 (293)
.|++.|.+.
T Consensus 229 aGad~I~V~ 237 (365)
T 3sr7_A 229 LGVKTVDIS 237 (365)
T ss_dssp HTCCEEECC
T ss_pred cCCCEEEEe
Confidence 899998774
No 398
>2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans}
Probab=49.85 E-value=74 Score=25.89 Aligned_cols=133 Identities=13% Similarity=0.074 Sum_probs=68.1
Q ss_pred HHHHHHHHCCCcEEEEeeecCCCCCCCChhHH----HHHHHHHHhhCCCcEEEEEc-C-CCcCcHHHHHHHHHHcCCCee
Q psy2895 95 KIAYTINKLKLNYVVITSVNRDDLHDGGSSHF----VSCIKHIRKLSTKIKIEILI-P-DFRNQINHVLKIFKQALPDVL 168 (293)
Q Consensus 95 ~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~----~~ll~~i~~~~~~~~i~~~~-~-~~~~~~~e~l~~l~~aG~~~i 168 (293)
+.++++.+.|. +|-.-+-..+.+...+.+.+ ...-+.|.+.. +.....+. | +..+ +..++.+++.|...+
T Consensus 75 ~~~~~~~~~Gh-eIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~-G~~~~~fr~P~G~~~--~~~~~~l~~~G~~~~ 150 (230)
T 2y8u_A 75 GLLQRMRDEGH-QVGAHTYDHVSLPSLGYDGIASQMTRLEEVIRPAL-GVAPAYMRPPYLETN--ELVLQVMRDLDYRVI 150 (230)
T ss_dssp HHHHHHHHTTC-EEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHH-SSCBSEECCGGGCCC--HHHHHHHHHTTCEEE
T ss_pred HHHHHHHHCCC-EEEecccCCCCcccCCHHHHHHHHHHHHHHHHHHh-CCCCcEEECCCCCCC--HHHHHHHHHcCCEEE
Confidence 45566667774 45444444443432223332 22223333322 22344554 5 5455 778889999998766
Q ss_pred eeccccchHHHhhcCCCCCHHHH----HHHHHHHHHhCCCceeeEeEEeec-C--CCHHH-HHHHHHHHHhCCCCEEEee
Q psy2895 169 NHNIETVPRLYKKVRPGSDYKHS----LNLLKNFKKLYPNILTKSGIMVGL-G--ENDEE-ILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 169 ~~~less~~~~~~i~~~~~~e~~----l~~i~~~~~~~pgi~~~~~~ivG~-g--Et~ed-~~~~l~~l~~l~~~~i~i~ 240 (293)
.-++++.+-.. .+.+.+ ++.+.. ....||. +|+.+ + .|.++ +...+..+++-|..++++.
T Consensus 151 ~w~~d~~Dw~~------~~~~~ii~~~~~~~~~-~~~~~g~-----IiL~Hd~~~~t~~~~L~~ii~~l~~~Gy~fvtl~ 218 (230)
T 2y8u_A 151 SASVDTKDYEN------QDADAIINTSFQLFLD-QLDAGGN-----IVLAHDIHYWTVASLAERMLQEVNARGLIATTVG 218 (230)
T ss_dssp CCSEECCGGGC------CSTTHHHHTHHHHHHH-HHHTTCC-----EEEECTTSHHHHHTHHHHHHHHHHHTTCEEECHH
T ss_pred EecCCCCccCC------CCHHHHHHHHHHHHHh-ccCCCCE-----EEEEECCCcchHHHHHHHHHHHHHHCCCEEEEhH
Confidence 65665522111 122222 222211 1222343 44545 3 24454 6778899999999998886
Q ss_pred cCC
Q psy2895 241 QYL 243 (293)
Q Consensus 241 ~~~ 243 (293)
+.+
T Consensus 219 ell 221 (230)
T 2y8u_A 219 DCL 221 (230)
T ss_dssp HHT
T ss_pred Hhh
Confidence 544
No 399
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=49.81 E-value=1.4e+02 Score=27.69 Aligned_cols=123 Identities=12% Similarity=0.176 Sum_probs=69.1
Q ss_pred HHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhC------CCcEEEEEcCCCcCcHHHHHHHHHHcCCCe
Q psy2895 94 KKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLS------TKIKIEILIPDFRNQINHVLKIFKQALPDV 167 (293)
Q Consensus 94 ~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~------~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~ 167 (293)
.+..+.+.+.++..+.+...+. .+ .+.-...++++.+.... ....+.+.. +...+..+.++.|.++|++.
T Consensus 196 ~eal~~m~~~~i~~lpVVDe~g-~l--~GiIT~~Dil~~~~~p~a~~D~~~rl~V~aav-g~~~d~~era~aLveaGvd~ 271 (511)
T 3usb_A 196 SEAEKILQKYKIEKLPLVDNNG-VL--QGLITIKDIEKVIEFPNSAKDKQGRLLVGAAV-GVTADAMTRIDALVKASVDA 271 (511)
T ss_dssp HHHHHHHHHHTCSEEEEECTTS-BE--EEEEEHHHHHHHHHCTTCCBCTTSCBCCEEEE-CSSTTHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHcCCCEEEEEeCCC-CE--eeeccHHHHHHhhhcccchhhhccceeeeeee-eeccchHHHHHHHHhhccce
Confidence 3333445556787776653221 11 11224556666665411 011122211 21222266788899999999
Q ss_pred eeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEe
Q psy2895 168 LNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTI 239 (293)
Q Consensus 168 i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i 239 (293)
+.+... + + ..+.+++.++++++.+|+..+.. |--.|.++ .+.+.+.|++.+.+
T Consensus 272 I~Id~a---------~-g-~~~~v~~~i~~i~~~~~~~~vi~----g~v~t~e~----a~~~~~aGad~i~v 324 (511)
T 3usb_A 272 IVLDTA---------H-G-HSQGVIDKVKEVRAKYPSLNIIA----GNVATAEA----TKALIEAGANVVKV 324 (511)
T ss_dssp EEEECS---------C-T-TSHHHHHHHHHHHHHCTTSEEEE----EEECSHHH----HHHHHHHTCSEEEE
T ss_pred EEeccc---------c-c-chhhhhhHHHHHHHhCCCceEEe----eeeccHHH----HHHHHHhCCCEEEE
Confidence 887521 1 2 45678889999999988765533 22235544 45566789998876
No 400
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=49.73 E-value=1.2e+02 Score=25.70 Aligned_cols=82 Identities=7% Similarity=0.090 Sum_probs=55.4
Q ss_pred HHHHHHHcCCCeeeeccccchHHHhhcC-C-CCCHHHHHHHHHHHHHhCCCceeeEeEEee-cCCCHHHHHHHHHHHHhC
Q psy2895 156 VLKIFKQALPDVLNHNIETVPRLYKKVR-P-GSDYKHSLNLLKNFKKLYPNILTKSGIMVG-LGENDEEILTVIHDMRNH 232 (293)
Q Consensus 156 ~l~~l~~aG~~~i~~~less~~~~~~i~-~-~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG-~gEt~ed~~~~l~~l~~l 232 (293)
..+.+.++|+|.+..+ +|.-...--.. . .-+.++.+...+.+.+..+...+.+|+=+| + .+.++..++...+.+.
T Consensus 41 sA~l~e~aG~d~ilvG-dSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY-~s~~~a~~~a~rl~ka 118 (275)
T 3vav_A 41 FAALLDRANVDVQLIG-DSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTY-GTPADAFASAVKLMRA 118 (275)
T ss_dssp HHHHHHHTTCSEEEEC-TTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSC-SSHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEEC-cHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCC-CCHHHHHHHHHHHHHc
Confidence 4555667899998554 23111111111 1 347899999888888876667788888885 6 7888888887666556
Q ss_pred CCCEEEe
Q psy2895 233 NIDILTI 239 (293)
Q Consensus 233 ~~~~i~i 239 (293)
|++-+.+
T Consensus 119 Ga~aVkl 125 (275)
T 3vav_A 119 GAQMVKF 125 (275)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9888776
No 401
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=49.72 E-value=51 Score=29.24 Aligned_cols=86 Identities=8% Similarity=0.011 Sum_probs=49.8
Q ss_pred HHHHHHHHcCCCeeeeccc-c--chHHHhhc-C-C----CCCHHH----HHHHHHHHHHhCCCceeeEeEE-----eec-
Q psy2895 155 HVLKIFKQALPDVLNHNIE-T--VPRLYKKV-R-P----GSDYKH----SLNLLKNFKKLYPNILTKSGIM-----VGL- 215 (293)
Q Consensus 155 e~l~~l~~aG~~~i~~~le-s--s~~~~~~i-~-~----~~~~e~----~l~~i~~~~~~~pgi~~~~~~i-----vG~- 215 (293)
+..++.+++|.|.|.+..- + ....+.-. + | +.+.+. .+++++.++++.+.-.+..-+= -|+
T Consensus 171 ~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~~V~vrls~~~~~~g~~ 250 (376)
T 1icp_A 171 VAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSDRVGIRISPFAHYNEAG 250 (376)
T ss_dssp HHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCTTTCC
T ss_pred HHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCCceEEEeccccccCCCC
Confidence 4455667799999886432 1 12322111 1 1 234544 4667777777643113332221 122
Q ss_pred -CCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 216 -GENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 216 -gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
+++.++..+.++.+.+.|++.+.++
T Consensus 251 ~~~~~~~~~~la~~le~~Gvd~i~v~ 276 (376)
T 1icp_A 251 DTNPTALGLYMVESLNKYDLAYCHVV 276 (376)
T ss_dssp CSCHHHHHHHHHHHHGGGCCSEEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 3466778889999999999999885
No 402
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=49.69 E-value=13 Score=36.05 Aligned_cols=35 Identities=20% Similarity=0.190 Sum_probs=29.3
Q ss_pred HhhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec
Q psy2895 179 YKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL 215 (293)
Q Consensus 179 ~~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~ 215 (293)
|..+.+. .+.+++.+.++.||++ ||.|-.++++.+
T Consensus 105 y~~idp~~Gt~~dfk~Lv~~aH~~--GI~VilD~V~NH 140 (686)
T 1d3c_A 105 FKKTNPAYGTIADFQNLIAAAHAK--NIKVIIDFAPNH 140 (686)
T ss_dssp EEEECTTTCCHHHHHHHHHHHHHT--TCEEEEEECTTE
T ss_pred ccccCcccCCHHHHHHHHHHHHHC--CCEEEEEeCcCc
Confidence 3445554 3899999999999999 999999999876
No 403
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=49.49 E-value=1.2e+02 Score=25.56 Aligned_cols=140 Identities=9% Similarity=0.061 Sum_probs=69.3
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCC
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALP 165 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~ 165 (293)
..++.++++..++...+ |.+...+. .+.|.....+.+...+...++-+.+ --.+++--.. ...+.++.+.++|+
T Consensus 58 ~~vtldemi~h~~aV~r-~~~~~~vv-aD~pfgsy~~~~~a~~~a~rl~kaG-a~aVklEgg~---e~~~~I~al~~agi 131 (264)
T 1m3u_A 58 LPVTVADIAYHTAAVRR-GAPNCLLL-ADLPFMAYATPEQAFENAATVMRAG-ANMVKIEGGE---WLVETVQMLTERAV 131 (264)
T ss_dssp TTCCHHHHHHHHHHHHH-HCTTSEEE-EECCTTSSSSHHHHHHHHHHHHHTT-CSEEECCCSG---GGHHHHHHHHHTTC
T ss_pred CCcCHHHHHHHHHHHHh-hCCCCcEE-EECCCCCcCCHHHHHHHHHHHHHcC-CCEEEECCcH---HHHHHHHHHHHCCC
Confidence 35889999988887765 34422223 3322111113344433333443332 1245552211 12678899999998
Q ss_pred Cee-eecccc-chHH---HhhcCCCC-CHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEe
Q psy2895 166 DVL-NHNIET-VPRL---YKKVRPGS-DYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTI 239 (293)
Q Consensus 166 ~~i-~~~les-s~~~---~~~i~~~~-~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i 239 (293)
..+ |+++.. +... |+.+.|.. ..++.++-.+.+.++ |. +.++=-+-.. +..+ ...+++.+..+.|
T Consensus 132 pV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA~a~~eA--GA----~~ivlE~vp~-~~a~--~it~~l~iP~igI 202 (264)
T 1m3u_A 132 PVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALALEAA--GA----QLLVLECVPV-ELAK--RITEALAIPVIGI 202 (264)
T ss_dssp CEEEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHHHHHHHHH--TC----CEEEEESCCH-HHHH--HHHHHCSSCEEEE
T ss_pred CeEeeecCCceeecccCCeEEEeCCHHHHHHHHHHHHHHHHC--CC----cEEEEecCCH-HHHH--HHHHhCCCCEEEe
Confidence 877 456643 2222 33222221 235556666666677 65 3333113233 3222 3345677767776
Q ss_pred e
Q psy2895 240 G 240 (293)
Q Consensus 240 ~ 240 (293)
.
T Consensus 203 G 203 (264)
T 1m3u_A 203 G 203 (264)
T ss_dssp S
T ss_pred C
Confidence 4
No 404
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=49.38 E-value=1e+02 Score=26.08 Aligned_cols=76 Identities=7% Similarity=0.059 Sum_probs=44.5
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCCC----CCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcC
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRDD----LHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQAL 164 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~----l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG 164 (293)
+.+...+.++.+.+.|.+.+.++.-.+.+ +...+.+.+..+.+..++. ++.+.+. ..+ .+.++.+.+.
T Consensus 50 ~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~----Gl~~~te-~~d--~~~~~~l~~~- 121 (276)
T 1vs1_A 50 SWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEA----GLPVVTE-VLD--PRHVETVSRY- 121 (276)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH----TCCEEEE-CCC--GGGHHHHHHH-
T ss_pred CHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHc----CCcEEEe-cCC--HHHHHHHHHh-
Confidence 68899999999999999876554433321 1111234444444443443 4555441 222 3456667677
Q ss_pred CCeeeecc
Q psy2895 165 PDVLNHNI 172 (293)
Q Consensus 165 ~~~i~~~l 172 (293)
++.+.++.
T Consensus 122 vd~~kIgs 129 (276)
T 1vs1_A 122 ADMLQIGA 129 (276)
T ss_dssp CSEEEECG
T ss_pred CCeEEECc
Confidence 89998864
No 405
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=49.38 E-value=52 Score=24.42 Aligned_cols=74 Identities=16% Similarity=0.073 Sum_probs=37.2
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCC--CcC--cHHHHHHHHHHc
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPD--FRN--QINHVLKIFKQA 163 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~--~~~--~~~e~l~~l~~a 163 (293)
.++|++.+.+.+ .+..-|.+++-..+ ....+.++++.+++..+. .+.++..| +.. +.++.-+.++++
T Consensus 41 ~p~e~~v~~a~~---~~~d~v~lS~~~~~-----~~~~~~~~i~~l~~~g~~-~i~v~vGG~~~~~~~~~~~~~~~~~~~ 111 (137)
T 1ccw_A 41 SPQELFIKAAIE---TKADAILVSSLYGQ-----GEIDCKGLRQKCDEAGLE-GILLYVGGNIVVGKQHWPDVEKRFKDM 111 (137)
T ss_dssp ECHHHHHHHHHH---HTCSEEEEEECSST-----HHHHHTTHHHHHHHTTCT-TCEEEEEESCSSSSCCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHh---cCCCEEEEEecCcC-----cHHHHHHHHHHHHhcCCC-CCEEEEECCCcCchHhhhhhHHHHHHC
Confidence 566776655543 35666666554321 134566677777665431 23333221 111 112234556777
Q ss_pred CCCeeee
Q psy2895 164 LPDVLNH 170 (293)
Q Consensus 164 G~~~i~~ 170 (293)
|+|.+..
T Consensus 112 G~d~~~~ 118 (137)
T 1ccw_A 112 GYDRVYA 118 (137)
T ss_dssp TCSEECC
T ss_pred CCCEEEC
Confidence 7777654
No 406
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=49.35 E-value=36 Score=30.62 Aligned_cols=83 Identities=12% Similarity=-0.021 Sum_probs=51.9
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcC-CCcC-cHHHHHHHHHHcCC
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIP-DFRN-QINHVLKIFKQALP 165 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~-~~~~-~~~e~l~~l~~aG~ 165 (293)
+++++.+.++.+.+.|++.+-+-.|..+.-.....+.-.+.++.+++.. |++.+.+=.+ ++.. +..+.++.|.+.|+
T Consensus 179 ~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG~d~~L~vDaN~~~~~~~Ai~~~~~Le~~~i 258 (412)
T 3stp_A 179 SIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIGYDNDLMLECYMGWNLDYAKRMLPKLAPYEP 258 (412)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCSSSEEEEECTTCSCHHHHHHHHHHHGGGCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcCCCCeEEEECCCCCCHHHHHHHHHHHHhcCC
Confidence 6899999999999999998877644321000001245567788888764 6667766444 3321 11345677777888
Q ss_pred Ceeeec
Q psy2895 166 DVLNHN 171 (293)
Q Consensus 166 ~~i~~~ 171 (293)
+.+.-+
T Consensus 259 ~~iEeP 264 (412)
T 3stp_A 259 RWLEEP 264 (412)
T ss_dssp SEEECC
T ss_pred CEEECC
Confidence 877533
No 407
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=49.27 E-value=62 Score=27.36 Aligned_cols=26 Identities=0% Similarity=-0.207 Sum_probs=20.7
Q ss_pred EEcCCCcCcHHHHHHHHHHcCCCeeeec
Q psy2895 144 ILIPDFRNQINHVLKIFKQALPDVLNHN 171 (293)
Q Consensus 144 ~~~~~~~~~~~e~l~~l~~aG~~~i~~~ 171 (293)
+.-+|+.+ .+.+..+.++|++.+-++
T Consensus 224 IaesGI~t--~edv~~l~~~Ga~gvLVG 249 (272)
T 3tsm_A 224 VGESGIFT--HEDCLRLEKSGIGTFLIG 249 (272)
T ss_dssp EEESSCCS--HHHHHHHHTTTCCEEEEC
T ss_pred EEECCCCC--HHHHHHHHHcCCCEEEEc
Confidence 33356666 888999999999999887
No 408
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=49.26 E-value=45 Score=29.55 Aligned_cols=81 Identities=15% Similarity=0.222 Sum_probs=49.4
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecC--CCC--C-----CCC------hhHHHHHHHHHHhhCCCcEEEEEc-CCCcC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNR--DDL--H-----DGG------SSHFVSCIKHIRKLSTKIKIEILI-PDFRN 151 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~--~~l--~-----~~~------~~~~~~ll~~i~~~~~~~~i~~~~-~~~~~ 151 (293)
++.+++.+.++.+.+.|+..|++++... +.. + ..+ .+.-.+.+..+++..++ .+-+.. .|+.+
T Consensus 231 ~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~-~ipvI~~GGI~s 309 (367)
T 3zwt_A 231 LTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQG-RVPIIGVGGVSS 309 (367)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTT-CSCEEEESSCCS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCC-CceEEEECCCCC
Confidence 5567899999999999999998875431 000 0 000 12345788888877542 344433 35544
Q ss_pred cHHHHHHHHHHcCCCeeeec
Q psy2895 152 QINHVLKIFKQALPDVLNHN 171 (293)
Q Consensus 152 ~~~e~l~~l~~aG~~~i~~~ 171 (293)
-++..+.+ ++|.+.+.++
T Consensus 310 -~~da~~~l-~~GAd~V~vg 327 (367)
T 3zwt_A 310 -GQDALEKI-RAGASLVQLY 327 (367)
T ss_dssp -HHHHHHHH-HHTCSEEEES
T ss_pred -HHHHHHHH-HcCCCEEEEC
Confidence 14455555 5899998876
No 409
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=49.14 E-value=53 Score=30.58 Aligned_cols=67 Identities=12% Similarity=0.030 Sum_probs=46.5
Q ss_pred CCcEEEEEcC-CCcCc------HHHHHHHHHHcCCCeeeeccccchHHHhhc-CCCCCHHHHHHHHHHHHHhCCCceee
Q psy2895 138 TKIKIEILIP-DFRNQ------INHVLKIFKQALPDVLNHNIETVPRLYKKV-RPGSDYKHSLNLLKNFKKLYPNILTK 208 (293)
Q Consensus 138 ~~~~i~~~~~-~~~~~------~~e~l~~l~~aG~~~i~~~less~~~~~~i-~~~~~~e~~l~~i~~~~~~~pgi~~~ 208 (293)
|++.+-++.| +..+. .++.++.|+++|++.+.+++ . =..+.-- ...++++.+.+.++.++++ |+.+.
T Consensus 9 ~~~~~~vmlp~~~v~~~~~~~~w~~dl~~mk~~Gln~Vr~~V-~-W~~iEP~g~G~ydf~~~d~~id~a~~~--GL~vi 83 (516)
T 1vem_A 9 PDYKAYLMAPLKKIPEVTNWETFENDLRWAKQNGFYAITVDF-W-WGDMEKNGDQQFDFSYAQRFAQSVKNA--GMKMI 83 (516)
T ss_dssp TTCEEEEECCSSCGGGTSCHHHHHHHHHHHHHTTEEEEEEEE-E-HHHHTCSSTTCCCCHHHHHHHHHHHHT--TCEEE
T ss_pred CCCCeEEEecccccCCCCCHHHHHHHHHHHHHcCCCEEEEec-c-hhhccCCCCCccchHHHHHHHHHHHHC--CCEEE
Confidence 4556666666 44421 37789999999999999887 3 2222222 1245888899999999999 99765
No 410
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=48.99 E-value=43 Score=28.30 Aligned_cols=63 Identities=16% Similarity=0.060 Sum_probs=36.6
Q ss_pred HHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCC-CcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeec
Q psy2895 101 NKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLST-KIKIEILIPDFRNQINHVLKIFKQALPDVLNHN 171 (293)
Q Consensus 101 ~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~-~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~ 171 (293)
.+.|++.|-+++-+...+ ..+.+.+. .+.+..| +..+ +...|..+ .+.+..+.++|++.+-++
T Consensus 179 ~~~Gad~IGv~~r~l~~~-~~dl~~~~----~l~~~v~~~~pv-VaegGI~t--~edv~~l~~~GadgvlVG 242 (272)
T 3qja_A 179 LKAGAKVIGVNARDLMTL-DVDRDCFA----RIAPGLPSSVIR-IAESGVRG--TADLLAYAGAGADAVLVG 242 (272)
T ss_dssp HHHTCSEEEEESBCTTTC-CBCTTHHH----HHGGGSCTTSEE-EEESCCCS--HHHHHHHHHTTCSEEEEC
T ss_pred HHCCCCEEEECCCccccc-ccCHHHHH----HHHHhCcccCEE-EEECCCCC--HHHHHHHHHcCCCEEEEc
Confidence 355888887775432222 12233443 4444433 2222 22346665 778899999999999886
No 411
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=48.81 E-value=90 Score=27.93 Aligned_cols=85 Identities=11% Similarity=-0.024 Sum_probs=52.3
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCC-----CCC-CCChhHHHHHHHHHHhhC-CCcEEEEEcC-CCcC-cHHHHHH
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRD-----DLH-DGGSSHFVSCIKHIRKLS-TKIKIEILIP-DFRN-QINHVLK 158 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~-----~l~-~~~~~~~~~ll~~i~~~~-~~~~i~~~~~-~~~~-~~~e~l~ 158 (293)
.+++++.+.++++.+.|++.+-+--|.+. ..+ ..+.+.-.+.++.+++.. +++.+.+=.+ ++.. +..+.++
T Consensus 143 ~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~~~~~~~A~~~~~ 222 (412)
T 4e4u_A 143 DDPDLAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHGQMVPSSAIRLAK 222 (412)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSCBCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCCCCCHHHHHHHHH
Confidence 47899999999999999999877433210 000 001345567788888764 5666666333 3321 1134567
Q ss_pred HHHHcCCCeeeecc
Q psy2895 159 IFKQALPDVLNHNI 172 (293)
Q Consensus 159 ~l~~aG~~~i~~~l 172 (293)
.|.+.|+..+.-++
T Consensus 223 ~L~~~~i~~iEeP~ 236 (412)
T 4e4u_A 223 RLEKYDPLWFEEPV 236 (412)
T ss_dssp HHGGGCCSEEECCS
T ss_pred HhhhcCCcEEECCC
Confidence 77778888776443
No 412
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=48.80 E-value=1.2e+02 Score=25.38 Aligned_cols=76 Identities=12% Similarity=0.076 Sum_probs=48.0
Q ss_pred HHHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEe----ec-CCC-------HH
Q psy2895 153 INHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMV----GL-GEN-------DE 220 (293)
Q Consensus 153 ~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~iv----G~-gEt-------~e 220 (293)
+++ ++.++++|++.+.+.... .+ ....++.-+..+.+.+. |+.+.+..-+ .+ ... .+
T Consensus 39 l~~-l~~~~~~G~~~vEl~~~~---~~-----~~~~~~~~~l~~~l~~~--gl~i~~~~~~~~~~~l~~~d~~~r~~~~~ 107 (309)
T 2hk0_A 39 GPY-IEKVAKLGFDIIEVAAHH---IN-----EYSDAELATIRKSAKDN--GIILTAGIGPSKTKNLSSEDAAVRAAGKA 107 (309)
T ss_dssp HHH-HHHHHHTTCSEEEEEHHH---HT-----TSCHHHHHHHHHHHHHT--TCEEEEECCCCSSSCSSCSCHHHHHHHHH
T ss_pred HHH-HHHHHHhCCCEEEeccCC---cc-----ccchhhHHHHHHHHHHc--CCeEEEecCCCCCCCCCCCCHHHHHHHHH
Confidence 467 999999999998875421 11 11124444555667777 9987663211 12 222 25
Q ss_pred HHHHHHHHHHhCCCCEEEe
Q psy2895 221 EILTVIHDMRNHNIDILTI 239 (293)
Q Consensus 221 d~~~~l~~l~~l~~~~i~i 239 (293)
.+...++.+.++|...+..
T Consensus 108 ~~~~~i~~A~~lG~~~v~~ 126 (309)
T 2hk0_A 108 FFERTLSNVAKLDIHTIGG 126 (309)
T ss_dssp HHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEe
Confidence 6778888889999998865
No 413
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=48.71 E-value=43 Score=28.04 Aligned_cols=120 Identities=12% Similarity=0.162 Sum_probs=0.0
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCC---------------hhHHHHHHHHHHhhCCCcEEEEEcC--CCcC
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGG---------------SSHFVSCIKHIRKLSTKIKIEILIP--DFRN 151 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~---------------~~~~~~ll~~i~~~~~~~~i~~~~~--~~~~ 151 (293)
+.+.-.+.++.+.+.|+.-|-|.--..+.+-+.. .+.+.++++++++..|-+-+.-+.| .+.-
T Consensus 26 ~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~~Pivlm~Y~N~i~~~G~ 105 (252)
T 3tha_A 26 NLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTKKALVFMVYYNLIFSYGL 105 (252)
T ss_dssp CHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCSSEEEEECCHHHHHHHCH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCEEEEeccCHHHHhhH
Q ss_pred cHHHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHH
Q psy2895 152 QINHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIH 227 (293)
Q Consensus 152 ~~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~ 227 (293)
+..++.++++|+|.+-++ .-.+++..+..+.++++ |+ ..-+++.-.-+.+.+....+
T Consensus 106 --e~F~~~~~~aGvdG~Iip-------------DLP~eE~~~~~~~~~~~--Gl--~~I~lvaP~t~~eRi~~ia~ 162 (252)
T 3tha_A 106 --EKFVKKAKSLGICALIVP-------------ELSFEESDDLIKECERY--NI--ALITLVSVTTPKERVKKLVK 162 (252)
T ss_dssp --HHHHHHHHHTTEEEEECT-------------TCCGGGCHHHHHHHHHT--TC--EECEEEETTSCHHHHHHHHT
T ss_pred --HHHHHHHHHcCCCEEEeC-------------CCCHHHHHHHHHHHHHc--CC--eEEEEeCCCCcHHHHHHHHH
No 414
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=48.32 E-value=74 Score=28.08 Aligned_cols=86 Identities=9% Similarity=0.078 Sum_probs=49.8
Q ss_pred HHHHHHHHcCCCeeeecc-cc--chHHHhhc-C-C----CCCHHH----HHHHHHHHHHhCCCceeeEeE-----Eeec-
Q psy2895 155 HVLKIFKQALPDVLNHNI-ET--VPRLYKKV-R-P----GSDYKH----SLNLLKNFKKLYPNILTKSGI-----MVGL- 215 (293)
Q Consensus 155 e~l~~l~~aG~~~i~~~l-es--s~~~~~~i-~-~----~~~~e~----~l~~i~~~~~~~pgi~~~~~~-----ivG~- 215 (293)
+..++.+++|.|.|.+.. -+ ....+.-. + | +.+++. .+++++.++++.+.-.+..-+ .-|+
T Consensus 157 ~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~~v~vRls~~~~~~g~~ 236 (362)
T 4ab4_A 157 SGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQRVGVHLAPRADAHDMG 236 (362)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCC
T ss_pred HHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCCceEEEeeccccccccC
Confidence 445556778999988743 22 13343322 1 1 335554 356667777764321222111 1122
Q ss_pred -CCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 216 -GENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 216 -gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
+++.++..+.++.+.+.|++.+.+.
T Consensus 237 ~~~~~~~~~~la~~l~~~Gvd~i~v~ 262 (362)
T 4ab4_A 237 DADRAETFTYVARELGKRGIAFICSR 262 (362)
T ss_dssp CTTHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCcHHHHHHHHHHHHHhCCCEEEEC
Confidence 1236788899999999999999886
No 415
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=48.18 E-value=1.2e+02 Score=25.39 Aligned_cols=132 Identities=8% Similarity=0.101 Sum_probs=81.5
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEc--C-CCcCc---HHHHHHHH
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILI--P-DFRNQ---INHVLKIF 160 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~--~-~~~~~---~~e~l~~l 160 (293)
..+.++|.+.++++.+.|+..|++. |. ++....+.++. .++.+-... | |.... +.|.-+.+
T Consensus 55 ~~t~~~I~~lc~eA~~~~~aaVCV~----p~-------~V~~a~~~L~g--s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai 121 (260)
T 3r12_A 55 FATPDDIKKLCLEARENRFHGVCVN----PC-------YVKLAREELEG--TDVKVVTVVGFPLGANETRTKAHEAIFAV 121 (260)
T ss_dssp TCCHHHHHHHHHHHHHTTCSEEEEC----GG-------GHHHHHHHHTT--SCCEEEEEESTTTCCSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEEC----HH-------HHHHHHHHhcC--CCCeEEEEecCCCCCCcHHHHHHHHHHHH
Confidence 4678999999999999999998873 21 22222233322 123333221 4 32221 13333344
Q ss_pred HHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhCCCCEEEe
Q psy2895 161 KQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNHNIDILTI 239 (293)
Q Consensus 161 ~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l~~~~i~i 239 (293)
+.|.|.+.+-+... . +. ..+++...+-++.++++.+|..+ -+|+=. --|++++....+...+.|.|+|-.
T Consensus 122 -~~GAdEIDmViNig-~----lk-~g~~~~v~~eI~~v~~a~~~~~l--KVIlEt~~Lt~eei~~A~~ia~eaGADfVKT 192 (260)
T 3r12_A 122 -ESGADEIDMVINVG-M----LK-AKEWEYVYEDIRSVVESVKGKVV--KVIIETCYLDTEEKIAACVISKLAGAHFVKT 192 (260)
T ss_dssp -HHTCSEEEEECCHH-H----HH-TTCHHHHHHHHHHHHHHTTTSEE--EEECCGGGCCHHHHHHHHHHHHHTTCSEEEC
T ss_pred -HcCCCEEEEEeehh-h----hc-cccHHHHHHHHHHHHHhcCCCcE--EEEEeCCCCCHHHHHHHHHHHHHhCcCEEEc
Confidence 46999987644321 1 11 34788888888888887666544 444433 347889999999999999999876
Q ss_pred e
Q psy2895 240 G 240 (293)
Q Consensus 240 ~ 240 (293)
+
T Consensus 193 S 193 (260)
T 3r12_A 193 S 193 (260)
T ss_dssp C
T ss_pred C
Confidence 5
No 416
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=48.03 E-value=12 Score=36.10 Aligned_cols=35 Identities=14% Similarity=0.064 Sum_probs=29.4
Q ss_pred HhhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec
Q psy2895 179 YKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL 215 (293)
Q Consensus 179 ~~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~ 215 (293)
|..+.+. .+.+++.+.++.+|+. ||.|-.++++-+
T Consensus 101 y~~idp~~Gt~~df~~Lv~~aH~~--GIkVilD~V~NH 136 (680)
T 1cyg_A 101 FKKPNPFFGTLSDFQRLVDAAHAK--GIKVIIDFAPNH 136 (680)
T ss_dssp EEEECTTTCCHHHHHHHHHHHHHT--TCEEEEEECTTE
T ss_pred ccccCcccCCHHHHHHHHHHHHHC--CCEEEEEeCCCC
Confidence 3445654 3899999999999999 999999999876
No 417
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=48.02 E-value=51 Score=29.48 Aligned_cols=84 Identities=12% Similarity=0.016 Sum_probs=51.5
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecC-C----CCC-CCChhHHHHHHHHHHhhC-CCcEEEEEcC-CCcC-cHHHHHH
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNR-D----DLH-DGGSSHFVSCIKHIRKLS-TKIKIEILIP-DFRN-QINHVLK 158 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~-~----~l~-~~~~~~~~~ll~~i~~~~-~~~~i~~~~~-~~~~-~~~e~l~ 158 (293)
.++|++.+.++++.+.|++.+-+--|.+ . ..+ ..+.+.-.+.++.+++.. +++.+.+=.+ ++.. +..+.++
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~~~~~~~A~~~~~ 229 (404)
T 4e5t_A 150 NDADMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHGQFTVSGAKRLAR 229 (404)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCSCBCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCCCcCHHHHHHHHH
Confidence 5789999999999999999987743321 0 000 011345567788888764 5566666333 3321 1134567
Q ss_pred HHHHcCCCeeeec
Q psy2895 159 IFKQALPDVLNHN 171 (293)
Q Consensus 159 ~l~~aG~~~i~~~ 171 (293)
.|.+.|++.+.-+
T Consensus 230 ~l~~~~i~~iEeP 242 (404)
T 4e5t_A 230 RLEAYDPLWFEEP 242 (404)
T ss_dssp HHGGGCCSEEECC
T ss_pred HHhhcCCcEEECC
Confidence 7777888877643
No 418
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=47.75 E-value=1.7e+02 Score=26.89 Aligned_cols=132 Identities=10% Similarity=0.080 Sum_probs=77.9
Q ss_pred hHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeee
Q psy2895 91 EEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNH 170 (293)
Q Consensus 91 eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~ 170 (293)
.+..+.++.+.+.|+..|.+.+... . .....++++.+++..|++.+-+- +..+ .+.++.+.++|+|.+.+
T Consensus 254 ~~~~~~a~~~~~aG~d~v~i~~~~G--~----~~~~~~~i~~i~~~~~~~pvi~~--~v~t--~~~a~~l~~aGad~I~v 323 (514)
T 1jcn_A 254 EDDKYRLDLLTQAGVDVIVLDSSQG--N----SVYQIAMVHYIKQKYPHLQVIGG--NVVT--AAQAKNLIDAGVDGLRV 323 (514)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCC--C----SHHHHHHHHHHHHHCTTCEEEEE--EECS--HHHHHHHHHHTCSEEEE
T ss_pred hhhHHHHHHHHHcCCCEEEeeccCC--c----chhHHHHHHHHHHhCCCCceEec--ccch--HHHHHHHHHcCCCEEEE
Confidence 3467778888889999988854432 1 23567889999988765544331 1233 67788888999999977
Q ss_pred cccc-c-hHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEe-ecCCCHHHHHHHHHHHHhCCCCEEEeec
Q psy2895 171 NIET-V-PRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMV-GLGENDEEILTVIHDMRNHNIDILTIGQ 241 (293)
Q Consensus 171 ~les-s-~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~iv-G~gEt~ed~~~~l~~l~~l~~~~i~i~~ 241 (293)
+... . ........-+......+..+..+++.. ++++ |. |=-.+.+|+.+.+. +|.+.+.+..
T Consensus 324 g~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~-~ipV----ia~GGI~~~~di~kala----~GAd~V~iG~ 388 (514)
T 1jcn_A 324 GMGCGSICITQEVMACGRPQGTAVYKVAEYARRF-GVPI----IADGGIQTVGHVVKALA----LGASTVMMGS 388 (514)
T ss_dssp CSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGG-TCCE----EEESCCCSHHHHHHHHH----TTCSEEEEST
T ss_pred CCCCCcccccccccCCCccchhHHHHHHHHHhhC-CCCE----EEECCCCCHHHHHHHHH----cCCCeeeECH
Confidence 5432 1 111100001222334455555555532 4433 32 22346677766554 7999988863
No 419
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=47.74 E-value=1e+02 Score=26.96 Aligned_cols=85 Identities=15% Similarity=0.223 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCCeeeec---------cccchHHHhhcCCCCCHHHH----HHHHHHHHHhCC-CceeeEeEEe-ec---C
Q psy2895 155 HVLKIFKQALPDVLNHN---------IETVPRLYKKVRPGSDYKHS----LNLLKNFKKLYP-NILTKSGIMV-GL---G 216 (293)
Q Consensus 155 e~l~~l~~aG~~~i~~~---------less~~~~~~i~~~~~~e~~----l~~i~~~~~~~p-gi~~~~~~iv-G~---g 216 (293)
+..++.+++|+|.|.+. +=+.-.-.+.-.=+.+++.+ +++++.++++.+ ++.+..-+=. ++ |
T Consensus 147 ~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g 226 (343)
T 3kru_A 147 EAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGG 226 (343)
T ss_dssp HHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTS
T ss_pred HHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccC
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 217 ENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 217 Et~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
.+.++..+.++.+.+. ++.+.+.
T Consensus 227 ~~~~~~~~~a~~l~~~-vd~i~vs 249 (343)
T 3kru_A 227 INIDMMVEYINMIKDK-VDLIDVS 249 (343)
T ss_dssp CCHHHHHHHHHHHTTT-CSEEEEE
T ss_pred ccHHHHHHHHHHhhcc-ccEEecc
No 420
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=47.36 E-value=28 Score=30.08 Aligned_cols=55 Identities=5% Similarity=0.048 Sum_probs=41.1
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCC-------CChhHHHHHHHHHHhhCCCcEEE
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHD-------GGSSHFVSCIKHIRKLSTKIKIE 143 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~-------~~~~~~~~ll~~i~~~~~~~~i~ 143 (293)
.++.+.+.++++++.++|++.|.|.|.. .. .+ .+.--+...++.||+.+|++.|-
T Consensus 54 r~sid~l~~~~~~~~~lGi~~v~LFgvp-~~-Kd~~gs~A~~~~g~v~rair~iK~~~pdl~vi 115 (323)
T 1l6s_A 54 RIPEKHLAREIERIANAGIRSVMTFGIS-HH-TDETGSDAWREDGLVARMSRICKQTVPEMIVM 115 (323)
T ss_dssp EEEGGGHHHHHHHHHHHTCCEEEEEEEC-SS-CBSSCGGGGSTTSHHHHHHHHHHHHCTTSEEE
T ss_pred eeCHHHHHHHHHHHHHCCCCEEEEeCCC-CC-CCccccccCCCCCcHHHHHHHHHHHCCCeEEE
Confidence 3688999999999999999999888772 11 11 01125778899999999986443
No 421
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=47.28 E-value=1.4e+02 Score=25.89 Aligned_cols=77 Identities=5% Similarity=0.061 Sum_probs=51.9
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcC-CCcC-cHHHHHHHHHHcC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIP-DFRN-QINHVLKIFKQAL 164 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~-~~~~-~~~e~l~~l~~aG 164 (293)
.+++++.+.++++.+.|++.+-+--|.. .+.-.+.++.+++.. |++.+.+=.+ ++.. +..+.++.|.+.|
T Consensus 139 ~~~~~~~~~a~~~~~~G~~~~K~K~G~~-------~~~d~~~v~avR~~~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~ 211 (356)
T 3ro6_B 139 KPVEETLAEAREHLALGFRVLKVKLCGD-------EEQDFERLRRLHETLAGRAVVRVDPNQSYDRDGLLRLDRLVQELG 211 (356)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCSC-------HHHHHHHHHHHHHHHTTSSEEEEECTTCCCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeCCC-------HHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHHhcC
Confidence 4789999999999999999887765431 345567788888764 6667766444 3321 1134567777788
Q ss_pred CCeeeec
Q psy2895 165 PDVLNHN 171 (293)
Q Consensus 165 ~~~i~~~ 171 (293)
+..+.=+
T Consensus 212 i~~iEqP 218 (356)
T 3ro6_B 212 IEFIEQP 218 (356)
T ss_dssp CCCEECC
T ss_pred CCEEECC
Confidence 8776533
No 422
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=47.20 E-value=1.3e+02 Score=25.54 Aligned_cols=138 Identities=11% Similarity=0.042 Sum_probs=79.7
Q ss_pred HHHHCCCcEEEEeee------cCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcC--cHHHHHHHHHHcCCCeee
Q psy2895 99 TINKLKLNYVVITSV------NRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRN--QINHVLKIFKQALPDVLN 169 (293)
Q Consensus 99 ~~~~~G~~~i~l~gg------~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~--~~~e~l~~l~~aG~~~i~ 169 (293)
.+.+.|++-|.++|. ..||....+.+.+...++.|.+..+ ..|-+=.+ |+.+ +..+.+.++.++|+..++
T Consensus 30 ~~~~aG~~ai~vs~~~~a~~~G~pD~~~vt~~em~~~~~~I~~~~~-~PviaD~d~Gyg~~~~~~~~v~~l~~aGa~gv~ 108 (290)
T 2hjp_A 30 LAEQAGFGGIWGSGFELSASYAVPDANILSMSTHLEMMRAIASTVS-IPLIADIDTGFGNAVNVHYVVPQYEAAGASAIV 108 (290)
T ss_dssp HHHHHTCSEEEECHHHHHHHTTSCTTTCSCHHHHHHHHHHHHTTCS-SCEEEECTTTTSSHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHcCCCEEEEChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCC-CCEEEECCCCCCCHHHHHHHHHHHHHhCCeEEE
Confidence 344569998888762 1233323446777777777776442 33433233 5432 124567777789999887
Q ss_pred eccccchHHHhhcC---C-CCCHHHHHHHHHHHHHhCCCceeeEeEEeecCC------CHHHHHHHHHHHHhCCCCEEEe
Q psy2895 170 HNIETVPRLYKKVR---P-GSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGE------NDEEILTVIHDMRNHNIDILTI 239 (293)
Q Consensus 170 ~~less~~~~~~i~---~-~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gE------t~ed~~~~l~~l~~l~~~~i~i 239 (293)
+-=+..++..-.+. + =.+.++..+.|+.++++ +.. .-.+|.|-.+ ..++..+-.....+.|.+.+.+
T Consensus 109 iED~~~~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a--~~~-~~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~ 185 (290)
T 2hjp_A 109 MEDKTFPKDTSLRTDGRQELVRIEEFQGKIAAATAA--RAD-RDFVVIARVEALIAGLGQQEAVRRGQAYEEAGADAILI 185 (290)
T ss_dssp EECBCSSCCC-------CCBCCHHHHHHHHHHHHHH--CSS-TTSEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred EcCCCCCccccccccCCCcccCHHHHHHHHHHHHHh--ccc-CCcEEEEeehHhhccccHHHHHHHHHHHHHcCCcEEEe
Confidence 63221221111111 1 12567788889888888 332 1123444322 3588888888889999998877
Q ss_pred e
Q psy2895 240 G 240 (293)
Q Consensus 240 ~ 240 (293)
-
T Consensus 186 e 186 (290)
T 2hjp_A 186 H 186 (290)
T ss_dssp C
T ss_pred C
Confidence 4
No 423
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=47.17 E-value=84 Score=29.58 Aligned_cols=77 Identities=23% Similarity=0.328 Sum_probs=40.5
Q ss_pred CCCHHHHHHHHHHHHHhCCCceeeEeEEeec--CCCHHHHHHHHHHHHhCCCCEEEeecCC-CCCC-Cccccccc-cChh
Q psy2895 185 GSDYKHSLNLLKNFKKLYPNILTKSGIMVGL--GENDEEILTVIHDMRNHNIDILTIGQYL-MPSR-LHLPVHRY-LHPK 259 (293)
Q Consensus 185 ~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~--gEt~ed~~~~l~~l~~l~~~~i~i~~~~-~p~~-~~~a~~r~-~~p~ 259 (293)
+.+.++.+..++. . |. ..+|+ .-.++++...++.+...--..+.++|-- .|.. .. ...| ..|+
T Consensus 185 G~~~~~~~~~l~~---~--~~-----~avG~NC~~gp~~~~~~l~~l~~~~~~p~~vyPNaG~p~~~~~--~~~~~~~p~ 252 (566)
T 1q7z_A 185 GTDPANFAITFDE---L--DI-----DALGINCSLGPEEILPIFQELSQYTDKFLVVEPNAGKPIVENG--KTVYPLKPH 252 (566)
T ss_dssp SCCHHHHHHHHHT---S--SC-----SEEEEESSSCHHHHHHHHHHHHHTCCSEEEEECCSSSCEEETT--EEECCCCHH
T ss_pred CCcHHHHHHHhhc---c--CC-----CEEEEeCCCCHHHHHHHHHHHHhcCCCEEEEEcCCCCCcccCC--ccccCCCHH
Confidence 5577666655533 3 42 24677 3347888888888876543344443110 0110 00 1112 3577
Q ss_pred HHHHHHHHHHHhcc
Q psy2895 260 FFEKFKKIAYKLGF 273 (293)
Q Consensus 260 ~~~~~~~~~~~~G~ 273 (293)
++....+.|.+.|.
T Consensus 253 ~~a~~~~~~~~~G~ 266 (566)
T 1q7z_A 253 DFAVHIDSYYELGV 266 (566)
T ss_dssp HHHTTHHHHHHTTC
T ss_pred HHHHHHHHHHHcCC
Confidence 77766666777664
No 424
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=47.16 E-value=90 Score=26.79 Aligned_cols=84 Identities=2% Similarity=-0.033 Sum_probs=49.3
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCC-CcEEEEEcCCCcC-cHHHHHHHHHHc
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLST-KIKIEILIPDFRN-QINHVLKIFKQA 163 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~-~~~i~~~~~~~~~-~~~e~l~~l~~a 163 (293)
..++.+.+.+.++.+.+.|+..+++.|.... ....+.+.-.++++.+.+... .+.+-+.+.+... +..+..+...++
T Consensus 23 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE-~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~ 101 (311)
T 3h5d_A 23 GSINFDAIPALIEHLLAHHTDGILLAGTTAE-SPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEF 101 (311)
T ss_dssp SSBCTTHHHHHHHHHHHTTCCCEEESSTTTT-GGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHS
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccC-hhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhc
Confidence 4688888999999998999998887664421 112235666677777766532 2334333321111 123445556666
Q ss_pred CC-Ceeee
Q psy2895 164 LP-DVLNH 170 (293)
Q Consensus 164 G~-~~i~~ 170 (293)
|. |.+.+
T Consensus 102 Ga~davlv 109 (311)
T 3h5d_A 102 GGFAAGLA 109 (311)
T ss_dssp CCCSEEEE
T ss_pred CCCcEEEE
Confidence 75 87654
No 425
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=47.16 E-value=1.5e+02 Score=26.11 Aligned_cols=68 Identities=15% Similarity=0.128 Sum_probs=45.8
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCC
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHN 233 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~ 233 (293)
.+.++.+.++|++.+.+.... + ..+..++.++++++..|++.+. .|-.-|.++ ...+.+.|
T Consensus 102 ~e~~~~a~~aGvdvI~id~a~----------G-~~~~~~e~I~~ir~~~~~~~Vi----~G~V~T~e~----A~~a~~aG 162 (361)
T 3r2g_A 102 LQRAEALRDAGADFFCVDVAH----------A-HAKYVGKTLKSLRQLLGSRCIM----AGNVATYAG----ADYLASCG 162 (361)
T ss_dssp HHHHHHHHHTTCCEEEEECSC----------C-SSHHHHHHHHHHHHHHTTCEEE----EEEECSHHH----HHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEEeCCC----------C-CcHhHHHHHHHHHHhcCCCeEE----EcCcCCHHH----HHHHHHcC
Confidence 678899999999987764211 1 1234577888898886776553 332346655 45567889
Q ss_pred CCEEEee
Q psy2895 234 IDILTIG 240 (293)
Q Consensus 234 ~~~i~i~ 240 (293)
+|.+.+.
T Consensus 163 aD~I~Vg 169 (361)
T 3r2g_A 163 ADIIKAG 169 (361)
T ss_dssp CSEEEEC
T ss_pred CCEEEEc
Confidence 9998874
No 426
>3ijd_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: C2F; 2.00A {Clostridium thermocellum atcc 27405}
Probab=47.06 E-value=1.2e+02 Score=26.27 Aligned_cols=114 Identities=8% Similarity=-0.023 Sum_probs=63.5
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCC-C-CCCChhHHHHHHHHHHhhCCCcEEEEEc-CCC----cCcHHHHHHHH
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDD-L-HDGGSSHFVSCIKHIRKLSTKIKIEILI-PDF----RNQINHVLKIF 160 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~-l-~~~~~~~~~~ll~~i~~~~~~~~i~~~~-~~~----~~~~~e~l~~l 160 (293)
.+.+++.+.+.++.+.|++.| | -|++|. . ...++.+..++ +++..+++.|-+.. |.- ..+ .+.+++=
T Consensus 101 ~t~~ei~~~L~~~~~~GI~ni-L-RGDpp~~~~~~~~~~~A~~l---~~~~~~~F~IGvA~yPe~H~~~~~d-~~~Lk~K 174 (315)
T 3ijd_A 101 YTPDEFRRLTRPVSGQDAFSV-F-VGAASRNQSVLLKLSDAYKI---RQDVNPDLLLGGVAIPERHMKNTDE-HLRIIDK 174 (315)
T ss_dssp SCHHHHHHHHSCCTTCCCEEE-E-ECCCC----CCSCHHHHHHH---HHHHCTTSEEEEEECGGGHHHHSCH-HHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEE-e-cCCCCCCCCCCcCHHHHHHH---HHhcCCCEEEEEEECCCCCCCHHHH-HHHHHHH
Confidence 688999999999999999886 4 444431 1 11234555554 44444566777643 521 121 2334443
Q ss_pred HHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHH----HHHHHhCCCceeeEeEEeec--CCCHHHH
Q psy2895 161 KQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLL----KNFKKLYPNILTKSGIMVGL--GENDEEI 222 (293)
Q Consensus 161 ~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i----~~~~~~~pgi~~~~~~ivG~--gEt~ed~ 222 (293)
.+||.+.+- . |- -++.+.+.+.+ +.++++ |+. .+-+|.|+ -.|...+
T Consensus 175 vdAGAdf~I-T-Q~----------ffD~e~~~~f~~~~~~~~r~~--Gi~-~vPIipGImPi~s~k~~ 227 (315)
T 3ijd_A 175 INKGCKYFI-T-QA----------VYNVEAAKDFLSDYYYYSKNN--NLK-MVPIIFTLTPCGSTKTL 227 (315)
T ss_dssp HHTTCCEEE-E-SC----------CCCHHHHHHHHHHHHHHHHHT--TBC-CCCEEEEECCCCSHHHH
T ss_pred HHCCCCEEE-c-cc----------cCCHHHHHHHHHHHHHHHHHC--CCC-CCcEEEEeeecCCHHHH
Confidence 468998643 1 10 12334444444 477888 882 34677777 4565543
No 427
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=46.86 E-value=1.5e+02 Score=25.95 Aligned_cols=77 Identities=13% Similarity=0.058 Sum_probs=51.5
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcC-CCcC-cHHHHHHHHHHcC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIP-DFRN-QINHVLKIFKQAL 164 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~-~~~~-~~~e~l~~l~~aG 164 (293)
.+++++.+.++++.+.|++.+-+--|.. .+.-.+.++.+++.. +++.+.+=.+ ++.. +..+.++.|.+.|
T Consensus 139 ~~~e~~~~~a~~~~~~G~~~~K~KvG~~-------~~~d~~~v~avR~~~g~~~~l~vDaN~~~~~~~A~~~~~~l~~~~ 211 (368)
T 3q45_A 139 DEPHKMAADAVQIKKNGFEIIKVKVGGS-------KELDVERIRMIREAAGDSITLRIDANQGWSVETAIETLTLLEPYN 211 (368)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCSC-------HHHHHHHHHHHHHHHCSSSEEEEECTTCBCHHHHHHHHHHHGGGC
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEecCC-------HHHHHHHHHHHHHHhCCCCeEEEECCCCCChHHHHHHHHHHhhcC
Confidence 4789999999999999999987765432 234457788888764 6666766444 3322 1134566777778
Q ss_pred CCeeeec
Q psy2895 165 PDVLNHN 171 (293)
Q Consensus 165 ~~~i~~~ 171 (293)
+..+.=+
T Consensus 212 i~~iEqP 218 (368)
T 3q45_A 212 IQHCEEP 218 (368)
T ss_dssp CSCEECC
T ss_pred CCEEECC
Confidence 8777533
No 428
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=46.65 E-value=1.5e+02 Score=25.96 Aligned_cols=54 Identities=11% Similarity=0.070 Sum_probs=39.2
Q ss_pred CChhHHHHHHHHHHHC-CCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcC
Q psy2895 88 LDIEEPKKIAYTINKL-KLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIP 147 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~-G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~ 147 (293)
.+++++.+.++++.+. |++.+-+--|.+ + .+.-.+.++.+++.. +++.+.+=.+
T Consensus 150 ~~~~~~~~~a~~~~~~~G~~~~K~Kvg~~-~-----~~~d~~~v~avR~~~g~~~~l~vDan 205 (372)
T 3tj4_A 150 FTLEDLLAGSARAVEEDGFTRLKIKVGHD-D-----PNIDIARLTAVRERVDSAVRIAIDGN 205 (372)
T ss_dssp SCHHHHHHHHHHHHHTTCCCEEEEECCCS-S-----HHHHHHHHHHHHHHSCTTCEEEEECT
T ss_pred CCHHHHHHHHHHHHHccCCCEEEEcCCCC-C-----HHHHHHHHHHHHHHcCCCCcEEeeCC
Confidence 4799999999999998 999887755432 1 244567888898875 5666766444
No 429
>1w1z_A Delta-aminolevulinic acid dehydratase; synthase, tetrapyrrole biosynthesis, ALAD, porphyrin biosynt heme biosynthesis, lyase; 2.6A {Prosthecochloris vibrioformis} SCOP: c.1.10.3 PDB: 2c1h_A*
Probab=46.58 E-value=39 Score=29.25 Aligned_cols=55 Identities=11% Similarity=0.203 Sum_probs=41.1
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCC-------CChhHHHHHHHHHHhhCCCcEEE
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHD-------GGSSHFVSCIKHIRKLSTKIKIE 143 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~-------~~~~~~~~ll~~i~~~~~~~~i~ 143 (293)
.++.+.+.++++++.+.|++.|.|.|.. .. .+ .+---+...++.||+.+|++.|-
T Consensus 60 r~sid~l~~~~~~~~~lGi~~v~LFgvp-~~-Kd~~gs~A~~~~g~v~rair~iK~~~p~l~vi 121 (328)
T 1w1z_A 60 RFTIDRAVEECKELYDLGIQGIDLFGIP-EQ-KTEDGSEAYNDNGILQQAIRAIKKAVPELCIM 121 (328)
T ss_dssp EEEHHHHHHHHHHHHHHTCCEEEEEECC-SS-CCSSCGGGGCTTSHHHHHHHHHHHHSTTSEEE
T ss_pred EeCHHHHHHHHHHHHHCCCCEEEEECCC-CC-CCccccccCCCCChHHHHHHHHHHHCCCeEEE
Confidence 3688999999999999999999888872 11 11 01124778899999999986443
No 430
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=46.38 E-value=1.3e+02 Score=25.36 Aligned_cols=114 Identities=9% Similarity=-0.106 Sum_probs=66.7
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCC-CcEEEEEcCCCc-CcHHHHHHHHHHc
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLST-KIKIEILIPDFR-NQINHVLKIFKQA 163 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~-~~~i~~~~~~~~-~~~~e~l~~l~~a 163 (293)
..++.+.+.+.++.+.+.|+..+++.|.... ....+.+.-.++++.+.+... .+.+-+.+.+.. .+..+..+...++
T Consensus 19 g~iD~~~l~~lv~~li~~Gv~gl~~~GttGE-~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~ 97 (294)
T 3b4u_A 19 GTVDIDAMIAHARRCLSNGCDSVTLFGTTGE-GCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNA 97 (294)
T ss_dssp SSBCHHHHHHHHHHHHHTTCSEEEESSTTTT-GGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHT
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccC-hhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhc
Confidence 5689999999999999999999988765431 112235666778887766532 233333332111 1124455666678
Q ss_pred CCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCC--Ccee
Q psy2895 164 LPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYP--NILT 207 (293)
Q Consensus 164 G~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~p--gi~~ 207 (293)
|+|.+.+-. + .|- +..+.+...+-.+.+.++.| ++++
T Consensus 98 Gadavlv~~---P-~y~---~~~s~~~l~~~f~~va~a~p~~~lPi 136 (294)
T 3b4u_A 98 GARNILLAP---P-SYF---KNVSDDGLFAWFSAVFSKIGKDARDI 136 (294)
T ss_dssp TCSEEEECC---C-CSS---CSCCHHHHHHHHHHHHHHHCTTCCCE
T ss_pred CCCEEEEcC---C-cCC---CCCCHHHHHHHHHHHHHhcCCCCCcE
Confidence 999876531 1 111 10255666666666655544 4554
No 431
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=46.37 E-value=1.2e+02 Score=26.34 Aligned_cols=70 Identities=10% Similarity=-0.062 Sum_probs=36.2
Q ss_pred HHHHHHHCCCcEEEEeeecCCCCCC-----CChhHHHHHHHHHHhhC--CCcE-EEEEcCCCcCcHHHHHHHHHHcCCCe
Q psy2895 96 IAYTINKLKLNYVVITSVNRDDLHD-----GGSSHFVSCIKHIRKLS--TKIK-IEILIPDFRNQINHVLKIFKQALPDV 167 (293)
Q Consensus 96 ~~~~~~~~G~~~i~l~gg~~~~l~~-----~~~~~~~~ll~~i~~~~--~~~~-i~~~~~~~~~~~~e~l~~l~~aG~~~ 167 (293)
.++...+.|+..|.+.-.....++. ...+++.++++.+++.. |+.. ++++. +. ...++.+.+.|+|.
T Consensus 192 ~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~~~~ii~~~~-g~----~~~l~~l~~~g~d~ 266 (354)
T 3cyv_A 192 YLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTK-GG----GQWLEAMAETGCDA 266 (354)
T ss_dssp HHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHSCSEETTEECCEEEECT-TT----TTTHHHHHTTSCSE
T ss_pred HHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEECC-CH----HHHHHHHHhcCCCE
Confidence 3444456799877653211111221 11345666666666432 1222 33332 32 23678888899998
Q ss_pred eee
Q psy2895 168 LNH 170 (293)
Q Consensus 168 i~~ 170 (293)
+++
T Consensus 267 i~~ 269 (354)
T 3cyv_A 267 LGL 269 (354)
T ss_dssp EEC
T ss_pred EEe
Confidence 875
No 432
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=46.34 E-value=67 Score=27.70 Aligned_cols=82 Identities=17% Similarity=0.077 Sum_probs=51.5
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeec--CCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcCCCcC-cHHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVN--RDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIPDFRN-QINHVLKIFK 161 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~--~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~~~~~-~~~e~l~~l~ 161 (293)
..++.+.+.+.++.+.+.|+..+++.|.. .+.+ +.+.-.++++.+.+.. ..+.|-+.+.+... +..+..+...
T Consensus 27 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~L---s~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~ 103 (318)
T 3qfe_A 27 DTLDLASQERYYAYLARSGLTGLVILGTNAEAFLL---TREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDAS 103 (318)
T ss_dssp TEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGS---CHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhC---CHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHH
Confidence 46889999999999999999999887654 3333 3455666777665542 23344443321111 1244556666
Q ss_pred HcCCCeeee
Q psy2895 162 QALPDVLNH 170 (293)
Q Consensus 162 ~aG~~~i~~ 170 (293)
++|+|.+.+
T Consensus 104 ~~Gadavlv 112 (318)
T 3qfe_A 104 VAGANYVLV 112 (318)
T ss_dssp HHTCSEEEE
T ss_pred HcCCCEEEE
Confidence 789998754
No 433
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=46.22 E-value=1.4e+02 Score=25.56 Aligned_cols=70 Identities=10% Similarity=-0.011 Sum_probs=40.2
Q ss_pred HHHHHHHCCCcEEEEeeecCCCCCC-----CChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeee
Q psy2895 96 IAYTINKLKLNYVVITSVNRDDLHD-----GGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNH 170 (293)
Q Consensus 96 ~~~~~~~~G~~~i~l~gg~~~~l~~-----~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~ 170 (293)
.++...+.|+.-|.+.--....++. ...+++.++++.+++. ++..+-.++.+. ...++.+.+.|+|.+++
T Consensus 184 ~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~-~g~~~i~~~~g~----~~~l~~l~~~g~d~~~~ 258 (338)
T 2eja_A 184 YLKEQIKAGADVVQIFDSWVNNLSLEDYGEYVYPYVNYLISELKDF-SDTPVIYFFRGS----SSFIDLAVDYRADALSV 258 (338)
T ss_dssp HHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHH-CCCCEEEEESSH----HHHHHHHTTSCCSEEEC
T ss_pred HHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhc-CCCCEEEEcCCc----HHHHHHHHHcCCCEEEe
Confidence 3444456799876553211111221 1246778888888876 344443333222 35788899999998765
No 434
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=46.11 E-value=75 Score=28.95 Aligned_cols=81 Identities=19% Similarity=0.193 Sum_probs=49.8
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCC-------CC---C---hhHHHHHHHHHHhhCCCcEEEEEc-CCCcCcH
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLH-------DG---G---SSHFVSCIKHIRKLSTKIKIEILI-PDFRNQI 153 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~-------~~---~---~~~~~~ll~~i~~~~~~~~i~~~~-~~~~~~~ 153 (293)
++.+++.+.++.+.+.|+..|++++....... .. + .+.-.++++.+++..++ .+-+.. .++.+ -
T Consensus 308 ~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~-~iPVIg~GGI~s-~ 385 (443)
T 1tv5_A 308 LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNK-QIPIIASGGIFS-G 385 (443)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTT-CSCEEEESSCCS-H
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCC-CCcEEEECCCCC-H
Confidence 55678999999999999999988876431110 00 0 12235778888876421 233433 35544 1
Q ss_pred HHHHHHHHHcCCCeeeec
Q psy2895 154 NHVLKIFKQALPDVLNHN 171 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~ 171 (293)
++..+.+ ++|.+.+.++
T Consensus 386 ~DA~e~l-~aGAd~Vqig 402 (443)
T 1tv5_A 386 LDALEKI-EAGASVCQLY 402 (443)
T ss_dssp HHHHHHH-HTTEEEEEES
T ss_pred HHHHHHH-HcCCCEEEEc
Confidence 4455555 6899988875
No 435
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=46.10 E-value=76 Score=27.13 Aligned_cols=82 Identities=9% Similarity=0.050 Sum_probs=50.2
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeec--CCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcCCCcC-cHHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVN--RDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIPDFRN-QINHVLKIFK 161 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~--~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~~~~~-~~~e~l~~l~ 161 (293)
..++.+.+.+.++.+.+.|+..+++.|.. .+.+ +.+.-.++++.+.+.. ..+.|-+.+.+... +..+..+...
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~L---s~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~ 104 (306)
T 1o5k_A 28 GELDLESYERLVRYQLENGVNALIVLGTTGESPTV---NEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAE 104 (306)
T ss_dssp TEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGC---CHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhC---CHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHH
Confidence 45889999999999999999998886643 3333 3455566676665532 22334333321111 1134555566
Q ss_pred HcCCCeeee
Q psy2895 162 QALPDVLNH 170 (293)
Q Consensus 162 ~aG~~~i~~ 170 (293)
++|+|.+.+
T Consensus 105 ~~Gadavlv 113 (306)
T 1o5k_A 105 KLGANGVLV 113 (306)
T ss_dssp HHTCSEEEE
T ss_pred hcCCCEEEE
Confidence 679998754
No 436
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=45.81 E-value=1.2e+02 Score=24.56 Aligned_cols=14 Identities=21% Similarity=0.145 Sum_probs=10.3
Q ss_pred HHHHHHHHHHhccc
Q psy2895 261 FEKFKKIAYKLGFK 274 (293)
Q Consensus 261 ~~~~~~~~~~~G~~ 274 (293)
+..+.+...+.|+.
T Consensus 216 ~~~~~~~l~~~gy~ 229 (262)
T 3p6l_A 216 VKGMLKELKSQNFK 229 (262)
T ss_dssp HHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCCC
Confidence 66777777777876
No 437
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=45.73 E-value=18 Score=33.24 Aligned_cols=68 Identities=13% Similarity=0.082 Sum_probs=44.6
Q ss_pred HHHHHHH--------HHcCCCeeeec-c-cc-c-----hHHHhhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec-
Q psy2895 154 NHVLKIF--------KQALPDVLNHN-I-ET-V-----PRLYKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL- 215 (293)
Q Consensus 154 ~e~l~~l--------~~aG~~~i~~~-l-es-s-----~~~~~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~- 215 (293)
.+.|+.| ++.|++.|.++ + ++ + ..-|..+.+. .+.++..+.++.+|+. ||.|-.++++.+
T Consensus 30 ~~~LdyL~~~~~~~~~~LGv~~I~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~d~~~Lv~~aH~~--Gi~VilD~V~NH~ 107 (488)
T 1wza_A 30 IEKLDYLNDGDPETIADLGVNGIWLMPIFKSPSYHGYDVTDYYKINPDYGTLEDFHKLVEAAHQR--GIKVIIDLPINHT 107 (488)
T ss_dssp HHTHHHHCCSCTTCCSSCCCSEEEECCCEECSSSSCCSCSEEEEECGGGCCHHHHHHHHHHHHHT--TCEEEEECCCSBC
T ss_pred HHhhhhhhccccchhhhcCccEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHC--CCEEEEEeccccc
Confidence 3456666 66777776552 2 11 1 1122334443 3899999999999999 999999999998
Q ss_pred CCCHHHHH
Q psy2895 216 GENDEEIL 223 (293)
Q Consensus 216 gEt~ed~~ 223 (293)
+..-.-+.
T Consensus 108 s~~~~~f~ 115 (488)
T 1wza_A 108 SERHPWFL 115 (488)
T ss_dssp CTTSHHHH
T ss_pred cCccHhhh
Confidence 54433333
No 438
>3aie_A Glucosyltransferase-SI; beta-alpha-barrels; HET: MES; 2.10A {Streptococcus mutans} PDB: 3aic_A* 3aib_A*
Probab=45.65 E-value=30 Score=34.39 Aligned_cols=63 Identities=6% Similarity=-0.077 Sum_probs=45.8
Q ss_pred HHHHHHHHHHcCCCeeeec-c-ccc-hH--------------HHhhcC----CC-CCHHHHHHHHHHHHHhCCCceeeEe
Q psy2895 153 INHVLKIFKQALPDVLNHN-I-ETV-PR--------------LYKKVR----PG-SDYKHSLNLLKNFKKLYPNILTKSG 210 (293)
Q Consensus 153 ~~e~l~~l~~aG~~~i~~~-l-ess-~~--------------~~~~i~----~~-~~~e~~l~~i~~~~~~~pgi~~~~~ 210 (293)
+.+.|..|++.|++.|-+. + ++. .. -|-.+. +. .+.++..+.++.+|++ ||.|-.+
T Consensus 635 i~~~l~yLk~LGvt~I~L~Pi~~~~~~~~~~~~~~~~GY~~~d~~~i~es~~~~~Gt~~df~~lv~~~H~~--GI~VilD 712 (844)
T 3aie_A 635 IAKNVDKFAEWGVTDFEMAPQYVSSTDGSFLDSVIQNGYAFTDRYDLGISKPNKYGTADDLVKAIKALHSK--GIKVMAD 712 (844)
T ss_dssp HHHTHHHHHHTTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSCSSCBTTBCHHHHHHHHHHHHHT--TCEEEEE
T ss_pred HHHHHHHHHHCCCCeEEECCcccCCCCCccccccCCCCCccccCccCCCCCCCCCCCHHHHHHHHHHHHHC--CCEEEEE
Confidence 3567899999999998763 2 221 10 112232 22 3799999999999999 9999999
Q ss_pred EEeec-CC
Q psy2895 211 IMVGL-GE 217 (293)
Q Consensus 211 ~ivG~-gE 217 (293)
+++.+ ++
T Consensus 713 ~V~NH~~~ 720 (844)
T 3aie_A 713 WVPDQMYA 720 (844)
T ss_dssp ECCSEECC
T ss_pred EccCcccC
Confidence 99988 54
No 439
>3klk_A Glucansucrase; native form, open conformation, multidomain protein, glycosyltransferase, transferase; 1.65A {Lactobacillus reuteri} PDB: 3kll_A* 3hz3_A* 4amc_A
Probab=45.65 E-value=30 Score=35.18 Aligned_cols=63 Identities=11% Similarity=0.053 Sum_probs=45.1
Q ss_pred HHHHHHHHHHcCCCeeeec-c-ccc-h---------------HHHh---hcCCC-CCHHHHHHHHHHHHHhCCCceeeEe
Q psy2895 153 INHVLKIFKQALPDVLNHN-I-ETV-P---------------RLYK---KVRPG-SDYKHSLNLLKNFKKLYPNILTKSG 210 (293)
Q Consensus 153 ~~e~l~~l~~aG~~~i~~~-l-ess-~---------------~~~~---~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~ 210 (293)
+.+.|..|++.|++.|-+. + ++. + ..+. .+.+. .+.+++.+.++.+|++ ||.|-.+
T Consensus 688 i~~kldyLk~LGVtaIwL~Pi~~~~~~~~~~~~~~~~GYd~~d~~~~~~~i~~~~Gt~~efk~lV~alH~~--GI~VIlD 765 (1039)
T 3klk_A 688 IAQNADLFKSWGITTFELAPQYNSSKDGTFLDSIIDNGYAFTDRYDLGMSTPNKYGSDEDLRNALQALHKA--GLQAIAD 765 (1039)
T ss_dssp HHHTHHHHHHTTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSCSSCBTTBCHHHHHHHHHHHHHT--TCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEECccccCCcccccccCcCCCCCCcccccccccCCCCCCCCHHHHHHHHHHHHHC--CCEEEEE
Confidence 3567889999999998763 2 221 1 1111 13332 3789999999999999 9999999
Q ss_pred EEeec-CC
Q psy2895 211 IMVGL-GE 217 (293)
Q Consensus 211 ~ivG~-gE 217 (293)
+++.+ .+
T Consensus 766 vV~NHta~ 773 (1039)
T 3klk_A 766 WVPDQIYN 773 (1039)
T ss_dssp ECCSEECC
T ss_pred EccCCcCC
Confidence 99988 54
No 440
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=45.47 E-value=1.4e+02 Score=25.32 Aligned_cols=147 Identities=10% Similarity=-0.005 Sum_probs=80.4
Q ss_pred CCcCcccCCCCCCCCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChh---HHHHHHHHHHhhCCCcEEEEEcC-CC
Q psy2895 74 RCKFCNISHGRPDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSS---HFVSCIKHIRKLSTKIKIEILIP-DF 149 (293)
Q Consensus 74 ~C~fC~~~~~~~~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~---~~~~ll~~i~~~~~~~~i~~~~~-~~ 149 (293)
=|+-++||.|. .+.+....+++++.+.|+.+|-+.-.-. .+...+.+ .+.+-++.+++..++..+++... .+
T Consensus 92 v~tVigFP~G~---~~~~~Kv~E~~~Av~~GAdEIDmVinig-~lksg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~~ 167 (281)
T 2a4a_A 92 IACVINFPYGT---DSMEKVLNDTEKALDDGADEIDLVINYK-KIIENTDEGLKEATKLTQSVKKLLTNKILKVIIEVGE 167 (281)
T ss_dssp EEEEESTTTCC---SCHHHHHHHHHHHHHHTCSEEEEECCHH-HHHHSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHHH
T ss_pred EEEEeCCCCCC---CCHHHHHHHHHHHHHcCCCEEEEecchH-hhhCCChhHHHHHHHHHHHHHHHhcCCceEEEEeccc
Confidence 45556677654 4677788889999999999984432110 01122245 66777777777655556777553 34
Q ss_pred cCcHHH----HHHHHHHcCCCeeeec--cccchHHHhhcCCCCCHHHHHHHHHHHHHh-------CCCceeeEeEEeecC
Q psy2895 150 RNQINH----VLKIFKQALPDVLNHN--IETVPRLYKKVRPGSDYKHSLNLLKNFKKL-------YPNILTKSGIMVGLG 216 (293)
Q Consensus 150 ~~~~~e----~l~~l~~aG~~~i~~~--less~~~~~~i~~~~~~e~~l~~i~~~~~~-------~pgi~~~~~~ivG~g 216 (293)
+++ +| ..+.-.++|.|.+.-+ .. ..+-+.++..-..+.+++. -+.+.+.+ -|=-
T Consensus 168 L~d-~e~i~~A~~ia~eaGADfVKTSTGf~---------~~gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKa---aGGI 234 (281)
T 2a4a_A 168 LKT-EDLIIKTTLAVLNGNADFIKTSTGKV---------QINATPSSVEYIIKAIKEYIKNNPEKNNKIGLKV---SGGI 234 (281)
T ss_dssp HCS-HHHHHHHHHHHHTTTCSEEECCCSCS---------SCCCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEE---ESSC
T ss_pred CCc-HHHHHHHHHHHHHhCCCEEEeCCCCC---------CCCCCHHHHHHHHHHHHHhhcccccCCCCceEEE---eCCC
Confidence 443 33 2344556899987643 11 1234666654433333321 11233221 2222
Q ss_pred CCHHHHHHHHHHHHh-CCCCEE
Q psy2895 217 ENDEEILTVIHDMRN-HNIDIL 237 (293)
Q Consensus 217 Et~ed~~~~l~~l~~-l~~~~i 237 (293)
-|.++..+.++...+ +|.+++
T Consensus 235 rt~e~al~~i~aga~~lG~~w~ 256 (281)
T 2a4a_A 235 SDLNTASHYILLARRFLSSLAC 256 (281)
T ss_dssp CSHHHHHHHHHHHHHHTC----
T ss_pred CCHHHHHHHHHHhhhhcccccc
Confidence 488888888888765 777654
No 441
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=45.46 E-value=1.5e+02 Score=26.33 Aligned_cols=84 Identities=12% Similarity=-0.002 Sum_probs=51.7
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCC----CC-------C------CChhHHHHHHHHHHhhC-CCcEEEEEcC-C
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDD----LH-------D------GGSSHFVSCIKHIRKLS-TKIKIEILIP-D 148 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~----l~-------~------~~~~~~~~ll~~i~~~~-~~~~i~~~~~-~ 148 (293)
.+++++.+.++++.+.|++.+-+--|..+. .+ . ...+.-.+.++.+++.. +++.+.+=.+ +
T Consensus 132 ~~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~~ 211 (401)
T 3sbf_A 132 DTMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGNQFHILHDVHER 211 (401)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTSSEEEEECTTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcCCCCEEEEECCCC
Confidence 468999999999999999988765443110 00 0 00245567788888764 6667766444 3
Q ss_pred CcC-cHHHHHHHHHHcCCCeeeec
Q psy2895 149 FRN-QINHVLKIFKQALPDVLNHN 171 (293)
Q Consensus 149 ~~~-~~~e~l~~l~~aG~~~i~~~ 171 (293)
+.. +..+.++.|.+.|+..+.-+
T Consensus 212 ~~~~~A~~~~~~L~~~~i~~iEqP 235 (401)
T 3sbf_A 212 LFPNQAIQFAKEVEQYKPYFIEDI 235 (401)
T ss_dssp SCHHHHHHHHHHHGGGCCSCEECS
T ss_pred CCHHHHHHHHHHHHhcCCCEEECC
Confidence 321 11345566777788776533
No 442
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=45.38 E-value=1.2e+02 Score=24.51 Aligned_cols=131 Identities=15% Similarity=0.131 Sum_probs=77.9
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEc--C-CCcCc--HHHHHHHHH
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILI--P-DFRNQ--INHVLKIFK 161 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~--~-~~~~~--~~e~l~~l~ 161 (293)
..+.+++.+.++++.+.|+..+++..+ + .....+ .++ ++.+...+ | +.... .....+...
T Consensus 16 ~~t~~~i~~l~~~a~~~g~~~v~v~~~----~----v~~~~~---~l~----~v~v~~v~~~P~g~~~~~~k~~~~~~A~ 80 (225)
T 1mzh_A 16 HLSEKEIEEFVLKSEELGIYAVCVNPY----H----VKLASS---IAK----KVKVCCVIGFPLGLNKTSVKVKEAVEAV 80 (225)
T ss_dssp TCCHHHHHHHHHHHHHTTCSEEEECGG----G----HHHHHH---HCS----SSEEEEEESTTTCCSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCeEEEECHH----H----HHHHHH---Hhc----CCceeeEecCCCCccchhhhHHHHHHHH
Confidence 467889999999999999988774311 1 111122 111 22332222 3 22110 123344555
Q ss_pred HcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 162 QALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-GENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 162 ~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
++|.+.+.+-+..+. + +...++..++.++.+++..+++ ..-+|+-- +-|.+++.+..+.+.+.|+|.+..+
T Consensus 81 ~~Gad~Id~viN~g~-----~-~~~~~~~~~~~i~~v~~a~~pv--~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I~ts 152 (225)
T 1mzh_A 81 RDGAQELDIVWNLSA-----F-KSEKYDFVVEELKEIFRETPSA--VHKVIVETPYLNEEEIKKAVEICIEAGADFIKTS 152 (225)
T ss_dssp HTTCSEEEEECCHHH-----H-HTTCHHHHHHHHHHHHHTCTTS--EEEEECCGGGCCHHHHHHHHHHHHHHTCSEEECC
T ss_pred HcCCCEEEEEecHHH-----H-hcCChHHHHHHHHHHHHHhcCc--eEEEEEeCCCCCHHHHHHHHHHHHHhCCCEEEEC
Confidence 689999884333211 1 1345677888888888875433 23334333 4578889999999999999999654
No 443
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=45.35 E-value=1.1e+02 Score=26.97 Aligned_cols=70 Identities=9% Similarity=0.086 Sum_probs=46.0
Q ss_pred HHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCC
Q psy2895 155 HVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNI 234 (293)
Q Consensus 155 e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~ 234 (293)
+.+.++.++|.+.+.+.+ +.+.+.-++.++.++++.|++.+..+.= -+-|.++..+.++.+.++++
T Consensus 153 ~~a~~~~~~Gf~~iKik~------------g~~~~~~~e~v~avr~a~gd~~l~vD~n--~~~~~~~a~~~~~~l~~~~i 218 (384)
T 2pgw_A 153 RDAAVGHAQGERVFYLKV------------GRGEKLDLEITAAVRGEIGDARLRLDAN--EGWSVHDAINMCRKLEKYDI 218 (384)
T ss_dssp HHHHHHHHTTCCEEEEEC------------CSCHHHHHHHHHHHHTTSTTCEEEEECT--TCCCHHHHHHHHHHHGGGCC
T ss_pred HHHHHHHHcCCCEEEECc------------CCCHHHHHHHHHHHHHHcCCcEEEEecC--CCCCHHHHHHHHHHHHhcCC
Confidence 445556677888877643 1156666788888888765444433321 15677888888888888888
Q ss_pred CEEE
Q psy2895 235 DILT 238 (293)
Q Consensus 235 ~~i~ 238 (293)
+++-
T Consensus 219 ~~iE 222 (384)
T 2pgw_A 219 EFIE 222 (384)
T ss_dssp SEEE
T ss_pred CEEe
Confidence 8764
No 444
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=45.23 E-value=66 Score=27.71 Aligned_cols=82 Identities=11% Similarity=-0.033 Sum_probs=49.1
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeee--cCCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcCCCcCcHHHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSV--NRDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIPDFRNQINHVLKIFKQ 162 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg--~~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~~~~~~~~e~l~~l~~ 162 (293)
..++.+.+.+.++.+.+.|+..+++.|. +.+.+ +.+.-.++++.+.+.. ..+.|-+.+.....+..+..+...+
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~L---s~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~ 104 (316)
T 3e96_A 28 GSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYAL---SLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKA 104 (316)
T ss_dssp CCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGS---CHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccC---CHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHh
Confidence 4688899999999999999998877654 33333 3455566666665542 2334433332111111344555666
Q ss_pred cCCCeeee
Q psy2895 163 ALPDVLNH 170 (293)
Q Consensus 163 aG~~~i~~ 170 (293)
+|+|.+.+
T Consensus 105 ~Gadavlv 112 (316)
T 3e96_A 105 AGADAVMI 112 (316)
T ss_dssp HTCSEEEE
T ss_pred cCCCEEEE
Confidence 78888764
No 445
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=45.17 E-value=1.4e+02 Score=25.25 Aligned_cols=78 Identities=13% Similarity=0.106 Sum_probs=48.1
Q ss_pred HHHHHHHHcCCCeeeeccccc-hHHHhhcCCCCCHHHHHHHHHHHHHhCCCce---eeEe--EE--eec-CCC-------
Q psy2895 155 HVLKIFKQALPDVLNHNIETV-PRLYKKVRPGSDYKHSLNLLKNFKKLYPNIL---TKSG--IM--VGL-GEN------- 218 (293)
Q Consensus 155 e~l~~l~~aG~~~i~~~less-~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~---~~~~--~i--vG~-gEt------- 218 (293)
+.++.++++|.+.+.+..... .... ..+.++.-+.-+.+.+. |+. +.+. +- ..+ ...
T Consensus 35 ~~l~~~~~~G~~~vEl~~~~~~~~~~-----~~~~~~~~~l~~~l~~~--gL~~~~i~~~~~~~~~~~l~~~d~~~r~~~ 107 (335)
T 2qw5_A 35 AHIKKLQRFGYSGFEFPIAPGLPENY-----AQDLENYTNLRHYLDSE--GLENVKISTNVGATRTFDPSSNYPEQRQEA 107 (335)
T ss_dssp HHHHHHHHTTCCEEEEECCCCCGGGH-----HHHHHHHHHHHHHHHHT--TCTTCEEEEECCCCSSSCTTCSSHHHHHHH
T ss_pred HHHHHHHHhCCCEEEEecCCCccccc-----ccchHHHHHHHHHHHHC--CCCcceeEEEeccCCCCCCCCCCHHHHHHH
Confidence 789999999999998865421 1100 00123444555567777 998 6542 11 111 112
Q ss_pred HHHHHHHHHHHHhCCCCEEEee
Q psy2895 219 DEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 219 ~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
.+.+...+++++++|...+ +.
T Consensus 108 ~~~~~~~i~~A~~lG~~~v-~~ 128 (335)
T 2qw5_A 108 LEYLKSRVDITAALGGEIM-MG 128 (335)
T ss_dssp HHHHHHHHHHHHHTTCSEE-EE
T ss_pred HHHHHHHHHHHHHcCCCEE-ec
Confidence 2567788888999999988 44
No 446
>3ttq_A Dextransucrase; (beta/alpha)8 barrel, transferase; HET: PG4; 1.90A {Leuconostoc mesenteroides} PDB: 3tto_A*
Probab=45.16 E-value=29 Score=35.38 Aligned_cols=64 Identities=6% Similarity=-0.008 Sum_probs=45.4
Q ss_pred HHHHHHHHHHcCCCeeeec-c-ccchH----------------HHhh---cCCC-CCHHHHHHHHHHHHHhCCCceeeEe
Q psy2895 153 INHVLKIFKQALPDVLNHN-I-ETVPR----------------LYKK---VRPG-SDYKHSLNLLKNFKKLYPNILTKSG 210 (293)
Q Consensus 153 ~~e~l~~l~~aG~~~i~~~-l-ess~~----------------~~~~---i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~ 210 (293)
+.+.|..|++.|++.|-+. + ++... .++. +.+. .+.++..+.|+.+|++ ||.|-.+
T Consensus 855 I~~kLdYLk~LGITaIwL~Pi~~s~~~~~~~~~~~d~GYdi~D~y~lGf~i~~~yGt~edfk~LV~alH~~--GI~VIlD 932 (1108)
T 3ttq_A 855 IAKNADVFNNWGITSFEMAPQYRSSGDHTFLDSTIDNGYAFTDRYDLGFNTPTKYGTDGDLRATIQALHHA--NMQVMAD 932 (1108)
T ss_dssp HHHTHHHHHHHTCCEEECCCCSCBCCCCSSGGGTTTCSSSBSCTTCSSSSSCCSSCCHHHHHHHHHHHHHT--TCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEECCCccCCCccccccccccCCcccccccccCcCCCCCCCCHHHHHHHHHHHHHC--CCEEEEE
Confidence 4677888999999998763 2 22111 1110 2333 3789999999999999 9999999
Q ss_pred EEeec-CCC
Q psy2895 211 IMVGL-GEN 218 (293)
Q Consensus 211 ~ivG~-gEt 218 (293)
+++.+ .+.
T Consensus 933 vV~NHta~~ 941 (1108)
T 3ttq_A 933 VVDNQVYNL 941 (1108)
T ss_dssp ECCSEECCC
T ss_pred eccccccCC
Confidence 99987 443
No 447
>2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A*
Probab=45.14 E-value=50 Score=30.23 Aligned_cols=77 Identities=12% Similarity=0.068 Sum_probs=52.5
Q ss_pred HHHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCH---HHHHHHHHHHHHhCCCceeeEeEE-e----------ec--C
Q psy2895 153 INHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDY---KHSLNLLKNFKKLYPNILTKSGIM-V----------GL--G 216 (293)
Q Consensus 153 ~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~---e~~l~~i~~~~~~~pgi~~~~~~i-v----------G~--g 216 (293)
.+|.++.|+++|++.+.+++ +-.++... ....+. +-+-+.+..+++. ||.+-.++. . |. .
T Consensus 69 ~~eDi~lm~~~G~~~~R~si-sWsRi~P~-~g~~n~~Gl~~y~~lid~l~~~--GI~p~vtL~H~d~P~~L~~~ggw~~r 144 (454)
T 2o9p_A 69 FKEDVQLMKQLGFLHYRFSV-AWPRIMPA-AGIINEEGLLFYEHLLDEIELA--GLIPMLTLYHWDLPQWIEDEGGWTQR 144 (454)
T ss_dssp HHHHHHHHHTTTCCEEEEEC-CHHHHCSS-TTCCCHHHHHHHHHHHHHHHHH--TCEEEEEEESSCCBHHHHHTTGGGST
T ss_pred HHHHHHHHHhcCCceEEecc-cHHhhCCC-CCCcCHHHHHHHHHHHHHHHHC--CCEEEEEecCCCccHHHHhcCCCCCc
Confidence 37889999999999999987 43566655 223455 6678889999999 997655543 1 22 2
Q ss_pred CCHHHHHHHHHHH-HhCC
Q psy2895 217 ENDEEILTVIHDM-RNHN 233 (293)
Q Consensus 217 Et~ed~~~~l~~l-~~l~ 233 (293)
++.+.+.+-.+.+ +.++
T Consensus 145 ~~~~~F~~ya~~~~~~~g 162 (454)
T 2o9p_A 145 ETIQHFKTYASVIMDRFG 162 (454)
T ss_dssp HHHHHHHHHHHHHHHHSS
T ss_pred chHHHHHHHHHHHHHHhC
Confidence 4456666666655 3465
No 448
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=45.06 E-value=1.6e+02 Score=26.15 Aligned_cols=77 Identities=6% Similarity=-0.003 Sum_probs=50.5
Q ss_pred CChhHHHHHHHHHHHC-CCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcC-cHHHHHHHHHHcC
Q psy2895 88 LDIEEPKKIAYTINKL-KLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRN-QINHVLKIFKQAL 164 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~-G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~-~~~e~l~~l~~aG 164 (293)
.++|++.+.++++.+. |++.+-+--|.. .+.=.+.++.+++..|++.+.+=.+ ++.. +..+.++.|.+.+
T Consensus 167 ~~~e~~~~~a~~~~~~~G~~~~K~KvG~~-------~~~d~~~v~avR~~~~~~~l~vDaN~~w~~~~A~~~~~~l~~~~ 239 (398)
T 4dye_A 167 DLPKAMAEHAVRVVEEGGFDAVKLKGTTD-------CAGDVAILRAVREALPGVNLRVDPNAAWSVPDSVRAGIALEELD 239 (398)
T ss_dssp THHHHHHHHHHHHHHHHCCSEEEEECCSC-------HHHHHHHHHHHHHHCTTSEEEEECTTCSCHHHHHHHHHHHGGGC
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEecCCC-------HHHHHHHHHHHHHhCCCCeEEeeCCCCCCHHHHHHHHHHHhhcC
Confidence 3579999999999888 999887765521 2344577888888777777776444 3321 1134456676777
Q ss_pred CCeeeec
Q psy2895 165 PDVLNHN 171 (293)
Q Consensus 165 ~~~i~~~ 171 (293)
+..+-=+
T Consensus 240 i~~iEqP 246 (398)
T 4dye_A 240 LEYLEDP 246 (398)
T ss_dssp CSEEECC
T ss_pred CCEEcCC
Confidence 7776533
No 449
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=45.05 E-value=1.3e+02 Score=24.67 Aligned_cols=77 Identities=9% Similarity=0.034 Sum_probs=50.6
Q ss_pred HHHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEe----ecC-CC-------HH
Q psy2895 153 INHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMV----GLG-EN-------DE 220 (293)
Q Consensus 153 ~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~iv----G~g-Et-------~e 220 (293)
+++.++.++++|++.+.+....... ...++.-+..+.+.+. |+.+.+..-+ .++ .. .+
T Consensus 19 ~~~~l~~~~~~G~~~vEl~~~~~~~--------~~~~~~~~~~~~l~~~--gl~~~~~~~~~~~~~l~~~d~~~r~~~~~ 88 (290)
T 2qul_A 19 FPATAKRIAGLGFDLMEISLGEFHN--------LSDAKKRELKAVADDL--GLTVMCCIGLKSEYDFASPDKSVRDAGTE 88 (290)
T ss_dssp HHHHHHHHHHTTCSEEEEESTTGGG--------SCHHHHHHHHHHHHHH--TCEEEEEEEECGGGCTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEecCCccc--------cchhhHHHHHHHHHHc--CCceEEecCCCCCCCCCCCCHHHHHHHHH
Confidence 4788999999999998876543100 0124455556677788 9987653211 132 22 26
Q ss_pred HHHHHHHHHHhCCCCEEEe
Q psy2895 221 EILTVIHDMRNHNIDILTI 239 (293)
Q Consensus 221 d~~~~l~~l~~l~~~~i~i 239 (293)
.+...++.+.++|...+.+
T Consensus 89 ~~~~~i~~a~~lG~~~v~~ 107 (290)
T 2qul_A 89 YVKRLLDDCHLLGAPVFAG 107 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEe
Confidence 6778888889999998765
No 450
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=44.95 E-value=98 Score=26.21 Aligned_cols=96 Identities=9% Similarity=0.039 Sum_probs=57.0
Q ss_pred hhHHHHHHHHHHhhCCCcEEEEEc--CCCcCcHHHHHHHHHHcCCCeeeecccc-chHHHhhcCCCCCHHHHHHHHHHHH
Q psy2895 123 SSHFVSCIKHIRKLSTKIKIEILI--PDFRNQINHVLKIFKQALPDVLNHNIET-VPRLYKKVRPGSDYKHSLNLLKNFK 199 (293)
Q Consensus 123 ~~~~~~ll~~i~~~~~~~~i~~~~--~~~~~~~~e~l~~l~~aG~~~i~~~les-s~~~~~~i~~~~~~e~~l~~i~~~~ 199 (293)
...+.++++...... + .+++.. ..+..++++.++..+++|+..+..+ | .+..+.+ + .++++++ .++
T Consensus 52 ~~~~~DlLe~ag~yI-D-~lKfg~GTs~l~~~l~ekI~l~~~~gV~v~~GG--TlfE~~l~q---g-~~~~yl~---~~k 120 (276)
T 1u83_A 52 LQFFKDAIAGASDYI-D-FVKFGWGTSLLTKDLEEKISTLKEHDITFFFGG--TLFEKYVSQ---K-KVNEFHR---YCT 120 (276)
T ss_dssp HHHHHHHHHHHGGGC-C-EEEECTTGGGGCTTHHHHHHHHHHTTCEEEECH--HHHHHHHHT---T-CHHHHHH---HHH
T ss_pred HHHHHHHHHHhhhhc-c-eEEecCcchhhhHHHHHHHHHHHHcCCeEeCCc--HHHHHHHHc---C-cHHHHHH---HHH
Confidence 578889988777653 3 466643 2334447899999999999888776 2 2333321 2 5555544 555
Q ss_pred HhCCCceeeEeEEeec-CCCHHHHHHHHHHHHhC
Q psy2895 200 KLYPNILTKSGIMVGL-GENDEEILTVIHDMRNH 232 (293)
Q Consensus 200 ~~~pgi~~~~~~ivG~-gEt~ed~~~~l~~l~~l 232 (293)
+. |+.. +-+--|. .-+.++..+.++.+++.
T Consensus 121 ~l--GF~~-IEISdGti~l~~~~~~~lI~~a~~~ 151 (276)
T 1u83_A 121 YF--GCEY-IEISNGTLPMTNKEKAAYIADFSDE 151 (276)
T ss_dssp HT--TCSE-EEECCSSSCCCHHHHHHHHHHHTTT
T ss_pred Hc--CCCE-EEECCCcccCCHHHHHHHHHHHHhh
Confidence 55 6632 2233344 55666666666655444
No 451
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=44.82 E-value=80 Score=27.13 Aligned_cols=81 Identities=9% Similarity=-0.065 Sum_probs=49.8
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeee--cCCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcCCCcC-cHHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSV--NRDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIPDFRN-QINHVLKIFK 161 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg--~~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~~~~~-~~~e~l~~l~ 161 (293)
..++.+.+.+.++.+.+.|+..+++.|. +.+.+ +.+.-.++++.+.+.. ..+.|-+.+.+ .. +..+..+...
T Consensus 28 g~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~L---s~eEr~~vi~~~~~~~~grvpViaGvg~-st~~ai~la~~A~ 103 (314)
T 3d0c_A 28 REIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYAL---TIEEAKQVATRVTELVNGRATVVAGIGY-SVDTAIELGKSAI 103 (314)
T ss_dssp CCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGS---CHHHHHHHHHHHHHHHTTSSEEEEEECS-SHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhC---CHHHHHHHHHHHHHHhCCCCeEEecCCc-CHHHHHHHHHHHH
Confidence 4688999999999999999998877554 43333 3455666776665542 23344333333 21 1134455556
Q ss_pred HcCCCeeee
Q psy2895 162 QALPDVLNH 170 (293)
Q Consensus 162 ~aG~~~i~~ 170 (293)
++|+|.+.+
T Consensus 104 ~~Gadavlv 112 (314)
T 3d0c_A 104 DSGADCVMI 112 (314)
T ss_dssp HTTCSEEEE
T ss_pred HcCCCEEEE
Confidence 679988764
No 452
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=44.76 E-value=66 Score=28.18 Aligned_cols=103 Identities=9% Similarity=-0.059 Sum_probs=58.0
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeec--CCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcC-cHHHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVN--RDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRN-QINHVLKIFKQ 162 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~--~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~-~~~e~l~~l~~ 162 (293)
..++.+.+.+.++.+.+.|+..+++.|.. ...+ +.+.-.++++. . ....+.|-+.+.+... +..+..+...+
T Consensus 42 g~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~L---s~eEr~~vi~~-~-~~grvpViaGvg~~st~eai~la~~A~~ 116 (344)
T 2hmc_A 42 RTPDFDALVRKGKELIADGMSAVVYCGSMGDWPLL---TDEQRMEGVER-L-VKAGIPVIVGTGAVNTASAVAHAVHAQK 116 (344)
T ss_dssp SSBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGS---CHHHHHHHHHH-H-HHTTCCEEEECCCSSHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhC---CHHHHHHHHHH-H-hCCCCcEEEecCCCCHHHHHHHHHHHHh
Confidence 56899999999999999999998876644 3333 24555566665 2 1122334333321111 11345555667
Q ss_pred cCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHH
Q psy2895 163 ALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKK 200 (293)
Q Consensus 163 aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~ 200 (293)
+|+|.+.+-. + .| .++.+.+.+++-.+.+.+
T Consensus 117 ~Gadavlv~~---P-~y---~~~~s~~~l~~~f~~IA~ 147 (344)
T 2hmc_A 117 VGAKGLMVIP---R-VL---SRGSVIAAQKAHFKAILS 147 (344)
T ss_dssp HTCSEEEECC---C-CS---SSTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEECC---C-cc---CCCCCHHHHHHHHHHHHh
Confidence 7999876531 1 11 111245555555555555
No 453
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=44.74 E-value=80 Score=23.32 Aligned_cols=71 Identities=11% Similarity=0.030 Sum_probs=40.5
Q ss_pred HHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec-C-CCHHHHHHHHHHHHh
Q psy2895 154 NHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL-G-ENDEEILTVIHDMRN 231 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~-g-Et~ed~~~~l~~l~~ 231 (293)
++.++..++.+++.+-++.-. +.+.....+.++.+++. |.. ...+++|= . -..+++.+.-+.+++
T Consensus 44 e~~v~~a~~~~~d~v~lS~~~----------~~~~~~~~~~i~~l~~~--g~~-~i~v~vGG~~~~~~~~~~~~~~~~~~ 110 (137)
T 1ccw_A 44 ELFIKAAIETKADAILVSSLY----------GQGEIDCKGLRQKCDEA--GLE-GILLYVGGNIVVGKQHWPDVEKRFKD 110 (137)
T ss_dssp HHHHHHHHHHTCSEEEEEECS----------STHHHHHTTHHHHHHHT--TCT-TCEEEEEESCSSSSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEEecC----------cCcHHHHHHHHHHHHhc--CCC-CCEEEEECCCcCchHhhhhhHHHHHH
Confidence 567777777788877765311 12233344566677776 653 23345552 1 112355555667788
Q ss_pred CCCCEE
Q psy2895 232 HNIDIL 237 (293)
Q Consensus 232 l~~~~i 237 (293)
+|++.+
T Consensus 111 ~G~d~~ 116 (137)
T 1ccw_A 111 MGYDRV 116 (137)
T ss_dssp TTCSEE
T ss_pred CCCCEE
Confidence 888753
No 454
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=44.50 E-value=80 Score=27.80 Aligned_cols=74 Identities=20% Similarity=0.205 Sum_probs=47.9
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcCcHHHHHHHHHHcC-C
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRNQINHVLKIFKQAL-P 165 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~~~~e~l~~l~~aG-~ 165 (293)
.+.++..+.++.+.+.|+..|.++++....-+... .+.++.+++.. .+-+... ++ + .+.++.+-++| +
T Consensus 247 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~----~~~~~~i~~~~---~iPvi~~Ggi-~--~~~a~~~l~~g~a 316 (365)
T 2gou_A 247 DPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTP----VSFKRALREAY---QGVLIYAGRY-N--AEKAEQAINDGLA 316 (365)
T ss_dssp SHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCC----HHHHHHHHHHC---CSEEEEESSC-C--HHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCcc----HHHHHHHHHHC---CCcEEEeCCC-C--HHHHHHHHHCCCc
Confidence 45778888999999999999998876421001111 25667777764 2334433 55 4 56666666677 9
Q ss_pred Ceeeec
Q psy2895 166 DVLNHN 171 (293)
Q Consensus 166 ~~i~~~ 171 (293)
|.+.++
T Consensus 317 D~V~ig 322 (365)
T 2gou_A 317 DMIGFG 322 (365)
T ss_dssp SEEECC
T ss_pred ceehhc
Confidence 998875
No 455
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=44.40 E-value=48 Score=28.32 Aligned_cols=82 Identities=9% Similarity=-0.039 Sum_probs=50.0
Q ss_pred CCCChhHHHHHHHHHHHCCCcEEEEeeec--CCCCCCCChhHHHHHHHHHHhhCC-CcEEEEEcCCCc-CcHHHHHHHHH
Q psy2895 86 DPLDIEEPKKIAYTINKLKLNYVVITSVN--RDDLHDGGSSHFVSCIKHIRKLST-KIKIEILIPDFR-NQINHVLKIFK 161 (293)
Q Consensus 86 ~~~~~eei~~~~~~~~~~G~~~i~l~gg~--~~~l~~~~~~~~~~ll~~i~~~~~-~~~i~~~~~~~~-~~~~e~l~~l~ 161 (293)
..++.+.+.+.++.+.+.|+..+++.|.. .+.+ +.+.-.++++.+.+... .+.+-+.+.+.. .+..+..+..+
T Consensus 16 g~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~L---s~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~ 92 (297)
T 2rfg_A 16 GQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTL---TEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQ 92 (297)
T ss_dssp TEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGS---CHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEECccccchhhC---CHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHH
Confidence 45888999999999999999998876643 3333 34556666766655322 233333332111 11134555566
Q ss_pred HcCCCeeee
Q psy2895 162 QALPDVLNH 170 (293)
Q Consensus 162 ~aG~~~i~~ 170 (293)
++|+|.+.+
T Consensus 93 ~~Gadavlv 101 (297)
T 2rfg_A 93 QAGADAVLC 101 (297)
T ss_dssp HHTCSEEEE
T ss_pred hcCCCEEEE
Confidence 779998765
No 456
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=44.38 E-value=1.6e+02 Score=25.61 Aligned_cols=77 Identities=10% Similarity=0.123 Sum_probs=51.3
Q ss_pred ChhHHHHHHHHHHH-CCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcC-CCcC-cHHHHHHHHHHcC
Q psy2895 89 DIEEPKKIAYTINK-LKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIP-DFRN-QINHVLKIFKQAL 164 (293)
Q Consensus 89 ~~eei~~~~~~~~~-~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~-~~~~-~~~e~l~~l~~aG 164 (293)
++++..+.++++.+ .|++.+-+-.|.. + .+.-.+.++.+++.. +++.+.+=.+ ++.. +..+.++.|.+.|
T Consensus 142 ~~e~~~~~a~~~~~~~Gf~~iKik~g~~-~-----~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~ 215 (370)
T 1nu5_A 142 DTARDIDSALEMIETRRHNRFKVKLGAR-T-----PAQDLEHIRSIVKAVGDRASVRVDVNQGWDEQTASIWIPRLEEAG 215 (370)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEECSSS-C-----HHHHHHHHHHHHHHHGGGCEEEEECTTCCCHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhCCccEEEEecCCC-C-----hHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhcC
Confidence 57888899999988 9999888766642 1 345567888888754 4566666444 3321 1134667777788
Q ss_pred CCeeeec
Q psy2895 165 PDVLNHN 171 (293)
Q Consensus 165 ~~~i~~~ 171 (293)
++.+.=+
T Consensus 216 i~~iEqP 222 (370)
T 1nu5_A 216 VELVEQP 222 (370)
T ss_dssp CCEEECC
T ss_pred cceEeCC
Confidence 8877533
No 457
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=44.34 E-value=1.7e+02 Score=25.87 Aligned_cols=80 Identities=13% Similarity=-0.022 Sum_probs=51.9
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCCh-hHHHHHHHHHHhhC-CCcEEEEEcC-CC--cC-cHHHHHHHHHH
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGS-SHFVSCIKHIRKLS-TKIKIEILIP-DF--RN-QINHVLKIFKQ 162 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~-~~~~~ll~~i~~~~-~~~~i~~~~~-~~--~~-~~~e~l~~l~~ 162 (293)
++++..+.++.+.+.|++.+-+-+ .+ + ..+. +...+.++.+++.. +++.+.+=.+ ++ .. +..+.++.|.+
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~-sp--v-G~~~~~~~~e~v~avr~a~G~d~~l~vDan~~~~~~~~~a~~~~~~l~~ 220 (401)
T 2hzg_A 145 TPQETLERARAARRDGFAAVKFGW-GP--I-GRGTVAADADQIMAAREGLGPDGDLMVDVGQIFGEDVEAAAARLPTLDA 220 (401)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEES-TT--T-TSSCHHHHHHHHHHHHHHHCSSSEEEEECTTTTTTCHHHHHTTHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEcC-CC--C-CCCHHHHHHHHHHHHHHHhCCCCeEEEECCCCCCCCHHHHHHHHHHHHh
Confidence 688899999999999999887752 00 0 0023 45678888888764 5667776444 44 21 11345667777
Q ss_pred cCCCeeeecc
Q psy2895 163 ALPDVLNHNI 172 (293)
Q Consensus 163 aG~~~i~~~l 172 (293)
.|++.+.-++
T Consensus 221 ~~i~~iEqP~ 230 (401)
T 2hzg_A 221 AGVLWLEEPF 230 (401)
T ss_dssp TTCSEEECCS
T ss_pred cCCCEEECCC
Confidence 8888875443
No 458
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=44.33 E-value=28 Score=29.01 Aligned_cols=36 Identities=19% Similarity=0.303 Sum_probs=22.8
Q ss_pred HHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCE
Q psy2895 195 LKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDI 236 (293)
Q Consensus 195 i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~ 236 (293)
++.+.++ |... +.+ +.|+.+++.++++.+++.|...
T Consensus 102 i~~~~~a--GAd~---itv-H~Ea~~~~~~~i~~ir~~G~k~ 137 (246)
T 3inp_A 102 IESFAKA--GATS---IVF-HPEASEHIDRSLQLIKSFGIQA 137 (246)
T ss_dssp HHHHHHH--TCSE---EEE-CGGGCSCHHHHHHHHHTTTSEE
T ss_pred HHHHHHc--CCCE---EEE-ccccchhHHHHHHHHHHcCCeE
Confidence 4456666 6532 122 2555567888999999998753
No 459
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=44.30 E-value=1.4e+02 Score=24.88 Aligned_cols=134 Identities=10% Similarity=0.086 Sum_probs=73.2
Q ss_pred HHHHCCCcEEEEeee------cCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcCcHHHHHHHHHHcCCCeeeec
Q psy2895 99 TINKLKLNYVVITSV------NRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRNQINHVLKIFKQALPDVLNHN 171 (293)
Q Consensus 99 ~~~~~G~~~i~l~gg------~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~~~~e~l~~l~~aG~~~i~~~ 171 (293)
.+.+.|++-|.++|. ..||....+.+.+...++.|.+..+ ..|.+=.+ ++.....+.+.++.++|+..+++-
T Consensus 35 ~~~~aG~dai~vg~~s~a~~~G~pD~~~vt~~em~~~~~~I~r~~~-~pviaD~~~Gyg~~~~~~~~~l~~aGa~gv~iE 113 (255)
T 2qiw_A 35 LVEEAGFSGLTIGSHPVADATGSSDGENMNFADYMAVVKKITSAVS-IPVSVDVESGYGLSPADLIAQILEAGAVGINVE 113 (255)
T ss_dssp HHHHTTCSCEEECHHHHHHHTTCCTTTCSCHHHHHHHHHHHHHHCS-SCEEEECTTCTTCCHHHHHHHHHHTTCCEEEEC
T ss_pred HHHHcCCCEEEEChHHHHHhCCCCCCCCcCHHHHHHHHHHHHhcCC-CCEEeccCCCcCcHHHHHHHHHHHcCCcEEEEC
Confidence 344568888777652 1233323446667777777766542 33444234 543322556777778999887753
Q ss_pred cccchHHHhhcCCCCCHHHHHHHHHHHHHhCC--CceeeEeEEeec------CC-----CHHHHHHHHHHHHhCCCCEEE
Q psy2895 172 IETVPRLYKKVRPGSDYKHSLNLLKNFKKLYP--NILTKSGIMVGL------GE-----NDEEILTVIHDMRNHNIDILT 238 (293)
Q Consensus 172 less~~~~~~i~~~~~~e~~l~~i~~~~~~~p--gi~~~~~~ivG~------gE-----t~ed~~~~l~~l~~l~~~~i~ 238 (293)
=+ . +..=+.-.+.++..+.|+.++++.. |+++ +|.|. |. ..++..+-...+.+.|.+.+.
T Consensus 114 d~-~---~~~~k~l~~~~e~~~~I~a~~~a~~~~g~~~---~v~aRtd~~~~g~~~~~~~~~~ai~ra~a~~eAGAd~i~ 186 (255)
T 2qiw_A 114 DV-V---HSEGKRVREAQEHADYIAAARQAADVAGVDV---VINGRTDAVKLGADVFEDPMVEAIKRIKLMEQAGARSVY 186 (255)
T ss_dssp SE-E---GGGTTEECCHHHHHHHHHHHHHHHHHHTCCC---EEEEEECHHHHCTTTSSSHHHHHHHHHHHHHHHTCSEEE
T ss_pred CC-C---CCCCCcccCHHHHHHHHHHHHHHHHhcCCCe---EEEEEechhhccCCcchHHHHHHHHHHHHHHHcCCcEEE
Confidence 11 1 1000011266777777777766521 3321 23332 11 256667777777888999887
Q ss_pred ee
Q psy2895 239 IG 240 (293)
Q Consensus 239 i~ 240 (293)
+-
T Consensus 187 ~e 188 (255)
T 2qiw_A 187 PV 188 (255)
T ss_dssp EC
T ss_pred Ec
Confidence 73
No 460
>2v5c_A O-GLCNACASE NAGJ; glycosidase, GH84, GH84C, hydrolase, coiled coil, family 84 glycoside hydrolase, carbohydrate binding module; 2.10A {Clostridium perfringens} PDB: 2cbj_A* 2cbi_A 2vur_A* 2x0y_A* 2j62_A* 2wb5_A* 2xpk_A* 2yds_A* 2ydr_A* 2ydq_A*
Probab=44.29 E-value=1.8e+02 Score=27.46 Aligned_cols=86 Identities=13% Similarity=0.105 Sum_probs=52.8
Q ss_pred HHHHHHHHHHcCCCeeeeccccchHHHhhcCCCCC---HHHHHHHHHHHHHhCCCceeeEeEEeec---CCC---HHHHH
Q psy2895 153 INHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSD---YKHSLNLLKNFKKLYPNILTKSGIMVGL---GEN---DEEIL 223 (293)
Q Consensus 153 ~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~---~e~~l~~i~~~~~~~pgi~~~~~~ivG~---gEt---~ed~~ 223 (293)
+.+.++.|...+++.++..+..+.......+..++ .+++.+.++.+++. |+.+...+-.|+ +.+ .+++.
T Consensus 168 ik~~id~ma~~KlN~~h~Hl~DDq~~~~~wr~~Yp~~~~~~i~elv~yA~~r--gI~vv~~i~Pe~d~~~~~~~~~~~~~ 245 (594)
T 2v5c_A 168 RLDQIKFYGENKLNTYIYAPKDDPYHREKWREPYPESEMQRMQELINASAEN--KVDFVFGISPGIDIRFDGDAGEEDFN 245 (594)
T ss_dssp HHHHHHHHHHTTCCEEEECCTTCGGGTTTTTSCCCGGGHHHHHHHHHHHHHT--TCEEEEEECGGGTCCCSTHHHHHHHH
T ss_pred HHHHHHHHHHhCCcEEEEecccCcccccccCCCCCHHHHHHHHHHHHHHHHC--CcEEEEecCCCccccCCCcchHHHHH
Confidence 46788888888999998766222211122222344 45899999999999 998753333333 333 34444
Q ss_pred HHHH---HHHhCCCCEEEee
Q psy2895 224 TVIH---DMRNHNIDILTIG 240 (293)
Q Consensus 224 ~~l~---~l~~l~~~~i~i~ 240 (293)
.+.. .+.+.|...++|.
T Consensus 246 ~l~~k~~~l~~~G~~~f~IG 265 (594)
T 2v5c_A 246 HLITKAESLYDMGVRSFAIY 265 (594)
T ss_dssp HHHHHHHHHHTTTCCEEEEE
T ss_pred HHHHHHHHHHhcCCcEEEec
Confidence 4443 3444788877775
No 461
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=44.16 E-value=98 Score=25.16 Aligned_cols=90 Identities=10% Similarity=0.076 Sum_probs=0.0
Q ss_pred CcCcccCCCCCCCCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcCc-
Q psy2895 75 CKFCNISHGRPDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRNQ- 152 (293)
Q Consensus 75 C~fC~~~~~~~~~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~~- 152 (293)
|.-.+||.+. .+.+....+++++.+.|+.+|-+.-.- ..+...+.+.+.+-+..+++...+..+.+... ..++.
T Consensus 58 ~~vigFP~G~---~~~~~k~~e~~~Ai~~GAdevd~vini-g~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e 133 (220)
T 1ub3_A 58 VTVVGFPLGY---QEKEVKALEAALACARGADEVDMVLHL-GRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPE 133 (220)
T ss_dssp EEEESTTTCC---SCHHHHHHHHHHHHHTTCSEEEEECCH-HHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHH
T ss_pred EEEecCCCCC---CchHHHHHHHHHHHHcCCCEEEecccc-hhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHH
Q ss_pred -HHHHHHHHHHcCCCee
Q psy2895 153 -INHVLKIFKQALPDVL 168 (293)
Q Consensus 153 -~~e~l~~l~~aG~~~i 168 (293)
+....+...++|.|.+
T Consensus 134 ~i~~a~~ia~eaGADfV 150 (220)
T 1ub3_A 134 EIARLAEAAIRGGADFL 150 (220)
T ss_dssp HHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHhCCCEE
No 462
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=44.12 E-value=1.9e+02 Score=26.33 Aligned_cols=123 Identities=9% Similarity=0.099 Sum_probs=72.9
Q ss_pred CCChhHHHHHHHHHHH-CCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCC-cCcHHHHHHHHHH-c
Q psy2895 87 PLDIEEPKKIAYTINK-LKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDF-RNQINHVLKIFKQ-A 163 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~-~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~-~~~~~e~l~~l~~-a 163 (293)
.++++|..+..+++.+ +++ ..-+.| +...+++.+..+-+.+ + .+.++..++ .++ .+.++.+.+ -
T Consensus 278 ~~t~~elid~y~~lle~ypI-----~~IEDP-l~~dD~eg~a~Lt~~l-----g-~i~IvGDEl~vTn-~~~i~~~Ie~~ 344 (441)
T 3qtp_A 278 VKDVDGLIAEYVDYGKHYPI-----ASIEDP-FAEDDWAAWNKFTVEH-----G-NFQIVGDDLLVTN-PARVQMAMDKN 344 (441)
T ss_dssp EECHHHHHHHHHHHHHHSCE-----EEEESC-SCTTCHHHHHHHHHHT-----T-TSEEEESTTTTTC-HHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHhhhcce-----eeecCC-CChHHHHHHHHHHHhc-----C-CceEEeccccccC-HHHHHHHHHcC
Confidence 5789999998888654 442 222322 4334455555444432 1 233433332 333 444444433 3
Q ss_pred CCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec--CCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 164 LPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL--GENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 164 G~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~--gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
-++.+.+.+ ++-.+.-+.+++++.++++ |+. +|+|+ |||+..+.. ++.-.++...+-..
T Consensus 345 a~n~IlIKv----------nqiGGITEalkaa~lA~~~--G~~----vmvsHrsgETeDt~iA--dLAVal~~gqIKtG 405 (441)
T 3qtp_A 345 ACNSVLIKV----------NQIGTLTETFKTIKMAQEK--GWG----VMASHRSGETEDTFIA--DLVVGLNCKQIKTG 405 (441)
T ss_dssp CCSEEEECG----------GGTCCHHHHHHHHHHHHHT--TCE----EEEECCSSCCSCCHHH--HHHHHTTCEEEECC
T ss_pred CCCEEEecc----------cccccHHHHHHHHHHHHHc--CCe----EEEeCCCCCccHhHHH--HHHHHhCCCccccC
Confidence 466666542 3344788899999999999 874 47777 999888764 44556777666554
No 463
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=44.10 E-value=1.5e+02 Score=26.08 Aligned_cols=76 Identities=7% Similarity=-0.117 Sum_probs=49.8
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhh-CCCcEEEEEcC-CCcC-cHHHHHHHHHHcC
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKL-STKIKIEILIP-DFRN-QINHVLKIFKQAL 164 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~-~~~~~i~~~~~-~~~~-~~~e~l~~l~~aG 164 (293)
.+++++.+.++.+.+.|++.+-+-.|.. + .+.-.+.++.+++. .+++.+.+=.+ ++.. +..+.++.|.+.|
T Consensus 164 ~~~~~~~~~a~~~~~~Gf~~iKik~g~~-~-----~~~~~e~v~avr~a~g~~~~l~vDan~~~~~~~a~~~~~~l~~~~ 237 (392)
T 1tzz_A 164 KGLSMLRGEMRGYLDRGYNVVKMKIGGA-P-----IEEDRMRIEAVLEEIGKDAQLAVDANGRFNLETGIAYAKMLRDYP 237 (392)
T ss_dssp -CHHHHHHHHHHHHTTTCSEEEEECSSS-C-----HHHHHHHHHHHHHHHTTTCEEEEECTTCCCHHHHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCC-C-----HHHHHHHHHHHHHhcCCCCeEEEECCCCCCHHHHHHHHHHHHHcC
Confidence 4789999999999899999888766642 1 34556888888875 45667776444 3321 1134555666667
Q ss_pred CCeee
Q psy2895 165 PDVLN 169 (293)
Q Consensus 165 ~~~i~ 169 (293)
++.+.
T Consensus 238 i~~iE 242 (392)
T 1tzz_A 238 LFWYE 242 (392)
T ss_dssp CSEEE
T ss_pred CCeec
Confidence 77654
No 464
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=44.07 E-value=1.3e+02 Score=24.64 Aligned_cols=131 Identities=10% Similarity=0.055 Sum_probs=81.2
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEc--C-CCcCc---HHHHHHHH
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILI--P-DFRNQ---INHVLKIF 160 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~--~-~~~~~---~~e~l~~l 160 (293)
..+.++|.+.++++.+.|+..|++. |. ++ .....++. .++.+-... | |.... ..|.-+.+
T Consensus 25 ~~t~~~i~~lc~eA~~~~~~aVcV~----p~-------~v-~~a~~l~~--~~v~v~tVigFP~G~~~~~~K~~E~~~Ai 90 (231)
T 3ndo_A 25 EATPSDVTALVDEAADLGVFAVCVS----PP-------LV-SVAAGVAP--SGLAIAAVAGFPSGKHVPGIKATEAELAV 90 (231)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEEEC----GG-------GH-HHHHHHCC--TTCEEEEEESTTTCCSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCcEEEEC----HH-------HH-HHHHHhcC--CCCeEEEEecCCCCCCcHHHHHHHHHHHH
Confidence 4678999999999999999998873 21 12 22223322 233333322 4 32221 13333333
Q ss_pred HHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEe--ecC---CCHHHHHHHHHHHHhCCCC
Q psy2895 161 KQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMV--GLG---ENDEEILTVIHDMRNHNID 235 (293)
Q Consensus 161 ~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~iv--G~g---Et~ed~~~~l~~l~~l~~~ 235 (293)
+.|.|.+.+-+... . +. ..+++..++-++.++++.+|..+ -+|+ |+- .|++++....+...+.|.|
T Consensus 91 -~~GAdEIDmVinig-~----lk-~g~~~~v~~ei~~v~~a~~~~~l--KvIiEt~~L~~~~t~eei~~a~~ia~~aGAD 161 (231)
T 3ndo_A 91 -AAGATEIDMVIDVG-A----AL-AGDLDAVSADITAVRKAVRAATL--KVIVESAALLEFSGEPLLADVCRVARDAGAD 161 (231)
T ss_dssp -HTTCSEEEEECCHH-H----HH-TTCHHHHHHHHHHHHHHTTTSEE--EEECCHHHHHHHTCHHHHHHHHHHHHHTTCS
T ss_pred -HcCCCEEEEEeehH-h----hh-cccHHHHHHHHHHHHHHccCCce--EEEEECcccCCCCCHHHHHHHHHHHHHHCcC
Confidence 57999987644320 1 11 35788888888888888766544 3344 332 3899999999999999999
Q ss_pred EEEee
Q psy2895 236 ILTIG 240 (293)
Q Consensus 236 ~i~i~ 240 (293)
+|-.+
T Consensus 162 fVKTS 166 (231)
T 3ndo_A 162 FVKTS 166 (231)
T ss_dssp EEECC
T ss_pred EEEcC
Confidence 99775
No 465
>2bhu_A Maltooligosyltrehalose trehalohydrolase; alpha-amylase, protein-carbohydrate complex, desiccation resistance; HET: TRS PGE; 1.1A {Deinococcus radiodurans} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 2bhy_A* 2bhz_A* 2bxy_A* 2bxz_A* 2by0_A* 2by1_A* 2by2_A* 2by3_A*
Probab=43.57 E-value=20 Score=34.13 Aligned_cols=61 Identities=8% Similarity=0.026 Sum_probs=44.5
Q ss_pred HHHHHHHHHHcCCCeeee-cc-cc-chH-------HHhhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec
Q psy2895 153 INHVLKIFKQALPDVLNH-NI-ET-VPR-------LYKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL 215 (293)
Q Consensus 153 ~~e~l~~l~~aG~~~i~~-~l-es-s~~-------~~~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~ 215 (293)
+.+.|..|++.|++.|.+ ++ ++ ... -|-.+.+. .+.++..+.++.+|+. ||.|-.++++.+
T Consensus 146 i~~~L~yl~~lGv~~I~L~Pi~~~~~~~~wGY~~~~y~~~~~~~Gt~~d~~~lv~~~H~~--Gi~VilD~V~NH 217 (602)
T 2bhu_A 146 AAEKLPYLKELGVTAIQVMPLAAFDGQRGWGYDGAAFYAPYAPYGRPEDLMALVDAAHRL--GLGVFLDVVYNH 217 (602)
T ss_dssp HHHTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECGGGCCHHHHHHHHHHHHHT--TCEEEEEECCSC
T ss_pred HHHHHHHHHHcCCCEEEECChhhccCCCCCCcccccCcccCcCCCCHHHHHHHHHHHHHC--CCEEEEEecccc
Confidence 356788999999999876 33 22 111 12234443 3789999999999999 999999998876
No 466
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=43.30 E-value=1.5e+02 Score=25.18 Aligned_cols=83 Identities=13% Similarity=0.171 Sum_probs=52.5
Q ss_pred HHHHHHHHHcCCCeeeecccc-chHHHhh-cCC--CCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHH
Q psy2895 154 NHVLKIFKQALPDVLNHNIET-VPRLYKK-VRP--GSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDM 229 (293)
Q Consensus 154 ~e~l~~l~~aG~~~i~~~les-s~~~~~~-i~~--~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l 229 (293)
.+.++.+.++ +|.+.++.-+ ...+.+. ... -...+...+.++.+++.. ++++..-+-.|.. .++..+.++.+
T Consensus 74 ~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~G~~--~~~~~~~a~~l 149 (318)
T 1vhn_A 74 SEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSV-SGKFSVKTRLGWE--KNEVEEIYRIL 149 (318)
T ss_dssp HHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHC-SSEEEEEEESCSS--SCCHHHHHHHH
T ss_pred HHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhh-CCCEEEEecCCCC--hHHHHHHHHHH
Confidence 3455666667 8887776554 3333321 111 125677888888888864 4666666655662 22233778888
Q ss_pred HhCCCCEEEee
Q psy2895 230 RNHNIDILTIG 240 (293)
Q Consensus 230 ~~l~~~~i~i~ 240 (293)
.+.|++.+.++
T Consensus 150 ~~~G~d~i~v~ 160 (318)
T 1vhn_A 150 VEEGVDEVFIH 160 (318)
T ss_dssp HHTTCCEEEEE
T ss_pred HHhCCCEEEEc
Confidence 99999999886
No 467
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=43.26 E-value=1.5e+02 Score=25.15 Aligned_cols=68 Identities=12% Similarity=0.107 Sum_probs=45.7
Q ss_pred HHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCC-CcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeec
Q psy2895 93 PKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLST-KIKIEILIPDFRNQINHVLKIFKQALPDVLNHN 171 (293)
Q Consensus 93 i~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~-~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~ 171 (293)
+...+.....+|..-|++-++..+ .-.++++.+++..+ ++.+.+. .|+.+ .|.++.+.++|.|.+.+|
T Consensus 188 ~~aYa~~gad~G~~lV~LD~~~~~--------v~~e~V~~I~~~~~~~iPV~vG-GGIrs--~Eda~~ll~aGAD~VVVG 256 (286)
T 3vk5_A 188 IDRYLHVARAFGFHMVYLYSRNEH--------VPPEVVRHFRKGLGPDQVLFVS-GNVRS--GRQVTEYLDSGADYVGFA 256 (286)
T ss_dssp HHHHHHHHHHTTCSEEEEECSSSC--------CCHHHHHHHHHHSCTTCEEEEE-SSCCS--HHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCc--------CCHHHHHHHHHhcCCCCCEEEE-eCCCC--HHHHHHHHHcCCCEEEEC
Confidence 367777777889998888765421 12367777777642 3333332 25555 788888888999999886
No 468
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=43.15 E-value=1e+02 Score=27.72 Aligned_cols=62 Identities=13% Similarity=0.063 Sum_probs=31.9
Q ss_pred HHHHHHHcCCCe-eeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecC--CCHHHHHHHHHHHHhC
Q psy2895 156 VLKIFKQALPDV-LNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLG--ENDEEILTVIHDMRNH 232 (293)
Q Consensus 156 ~l~~l~~aG~~~-i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~g--Et~ed~~~~l~~l~~l 232 (293)
.++.+++.|+.. +++.++.+.+ ..+.+.++....+. .. |+ ..||++ -.++++...++.+++.
T Consensus 170 a~~a~~~~~lPv~iS~T~~~~G~-----l~G~~~~~~~~~l~---~~--~~-----~avGvNC~~gP~~~~~~l~~l~~~ 234 (406)
T 1lt8_A 170 AVETLIASGKPVAATMAIGPEGD-----LHGVPPGEAAVRLV---KA--GA-----SIIGVNCHFDPTISLKTVKLMKEG 234 (406)
T ss_dssp HHHHHGGGTSCEEEEECCBTTBC-----TTCCCHHHHHHHHH---TT--TC-----SEEEEESSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCcEEEEEEECCCCC-----cCCCcHHHHHHHhh---cC--CC-----CEEEecCCCCHHHHHHHHHHHHHh
Confidence 445555555433 2344432211 22556666555443 33 42 246773 3477788888777643
No 469
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=43.05 E-value=1.3e+02 Score=27.13 Aligned_cols=124 Identities=11% Similarity=0.123 Sum_probs=72.4
Q ss_pred CCChhHHHHHHHH-HHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCC-CcCcHHHHHHHHHHcC
Q psy2895 87 PLDIEEPKKIAYT-INKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPD-FRNQINHVLKIFKQAL 164 (293)
Q Consensus 87 ~~~~eei~~~~~~-~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~-~~~~~~e~l~~l~~aG 164 (293)
.+++++.++.+++ +.++++.. -+.| ++..+++.+..+-+.+.. .+.++--+ +..+ .+.++.+.+.+
T Consensus 262 ~~t~~eai~~~~~ll~~y~i~~-----IEdP-l~~dD~eg~~~L~~~~~~-----pI~ivGDel~vt~-~~~~~~~i~~~ 329 (428)
T 3tqp_A 262 QLTSEEMIDRLTEWTKKYPVIS-----IEDG-LSENDWAGWKLLTERLEN-----KVQLVGDDIFVTN-PDILEKGIKKN 329 (428)
T ss_dssp CBCHHHHHHHHHHHHHHSCEEE-----EECC-SCTTCHHHHHHHHHHHTT-----TSEEEESTTTTTC-HHHHHHHHHTT
T ss_pred ccCHHHHHHHHHHHHhhcccce-----EeCC-CCcccHHHHHHHHHhcCC-----CcceeccccccCC-HHHHHHHHHhC
Confidence 5789999999988 66666332 2322 443345555544443321 23333223 2223 44455554443
Q ss_pred -CCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeec--CCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 165 -PDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGL--GENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 165 -~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~--gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
+|.+.+.+ ++-.+.-+.+++++.++++ |+.+ |+|+ |||...+.. ++.-.++...+-..
T Consensus 330 a~d~i~iKv----------~~iGGiTealkia~lA~~~--G~~~----~v~H~sGEted~~ia--dLaVa~~~~~ik~G 390 (428)
T 3tqp_A 330 IANAILVKL----------NQIGTLTETLATVGLAKSN--KYGV----IISHRSGETEDTTIA--DLAVATDARQIKTG 390 (428)
T ss_dssp CCSEEEECH----------HHHCCHHHHHHHHHHHHHT--TCEE----EEECCSBCCSCCHHH--HHHHHTTCEEEECC
T ss_pred CCCEEEecc----------cccCCHHHHHHHHHHHHHc--CCeE----EEeCCCCCchHHHHH--HHHHHcCCCcccCC
Confidence 56666542 2233788899999999999 8853 5666 899877654 44456676665543
No 470
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=43.02 E-value=12 Score=34.34 Aligned_cols=33 Identities=3% Similarity=0.044 Sum_probs=28.6
Q ss_pred hcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec
Q psy2895 181 KVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL 215 (293)
Q Consensus 181 ~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~ 215 (293)
.+.+. .+.++..+.++.+|+. ||.|-.++++.+
T Consensus 66 ~idp~~Gt~~d~~~lv~~~h~~--Gi~VilD~V~NH 99 (471)
T 1jae_A 66 IINTRSGDESAFTDMTRRCNDA--GVRIYVDAVINH 99 (471)
T ss_dssp CSEETTEEHHHHHHHHHHHHHT--TCEEEEEECCSB
T ss_pred cccCCCCCHHHHHHHHHHHHHC--CCEEEEEEeccc
Confidence 45544 3889999999999999 999999999988
No 471
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=42.81 E-value=25 Score=28.73 Aligned_cols=72 Identities=7% Similarity=0.057 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEc-CCCcCcHHHHHHHHHHc---CCCe
Q psy2895 92 EPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILI-PDFRNQINHVLKIFKQA---LPDV 167 (293)
Q Consensus 92 ei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~-~~~~~~~~e~l~~l~~a---G~~~ 167 (293)
...+.++.+.+.|+..|.+++.+.+.... +. -.++++++++.. .+.+.. .|..+ .+.+.++.++ |++.
T Consensus 150 ~~~e~~~~~~~~G~~~i~~~~~~~~~~~~-g~--~~~~~~~l~~~~---~ipvia~GGI~~--~~d~~~~~~~~~~Gad~ 221 (244)
T 2y88_A 150 DLWDVLERLDSEGCSRFVVTDITKDGTLG-GP--NLDLLAGVADRT---DAPVIASGGVSS--LDDLRAIATLTHRGVEG 221 (244)
T ss_dssp EHHHHHHHHHHTTCCCEEEEETTTTTTTS-CC--CHHHHHHHHTTC---SSCEEEESCCCS--HHHHHHHHTTGGGTEEE
T ss_pred CHHHHHHHHHhCCCCEEEEEecCCccccC-CC--CHHHHHHHHHhC---CCCEEEECCCCC--HHHHHHHHhhccCCCCE
Confidence 55667777888899999998876432211 11 135556666542 233433 35555 6778888888 9998
Q ss_pred eeec
Q psy2895 168 LNHN 171 (293)
Q Consensus 168 i~~~ 171 (293)
+.++
T Consensus 222 v~vG 225 (244)
T 2y88_A 222 AIVG 225 (244)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 8876
No 472
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=42.72 E-value=1.5e+02 Score=24.99 Aligned_cols=139 Identities=8% Similarity=0.043 Sum_probs=70.4
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCC
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPD 166 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~ 166 (293)
.++.++++..++...+ |++...+.. +.|.....+.+...+.+.++-+.+ --.|++--. ... .+.++.|.++|+.
T Consensus 71 ~vtldem~~h~~aV~r-~~~~~~vva-D~pfgsY~s~~~a~~~a~rl~kaG-a~aVklEdg-~~~--~~~i~~l~~~GIp 144 (275)
T 3vav_A 71 PVTLDDIAYHTACVAR-AQPRALIVA-DLPFGTYGTPADAFASAVKLMRAG-AQMVKFEGG-EWL--AETVRFLVERAVP 144 (275)
T ss_dssp TCCHHHHHHHHHHHHH-TCCSSEEEE-ECCTTSCSSHHHHHHHHHHHHHTT-CSEEEEECC-GGG--HHHHHHHHHTTCC
T ss_pred ccCHHHHHHHHHHHHh-cCCCCCEEE-ecCCCCCCCHHHHHHHHHHHHHcC-CCEEEECCc-hhH--HHHHHHHHHCCCC
Confidence 5889999999888766 565333332 222211133455444444443332 125665321 111 6789999999998
Q ss_pred eee-ecccc-chHHHhhcC-CCCC---HHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 167 VLN-HNIET-VPRLYKKVR-PGSD---YKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 167 ~i~-~~les-s~~~~~~i~-~~~~---~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
.+- +++-. +...+.... .+.+ .++.++..+.+.++ |. +.|+==+-..+... ...+++.+-.+.|.
T Consensus 145 v~gHlgltPq~~~~~gg~~vqgrt~~~a~~~i~rA~a~~eA--GA----~~ivlE~vp~~~a~---~It~~l~iP~igIG 215 (275)
T 3vav_A 145 VCAHVGLTPQSVHAFGGFKVQGKTEAGAAQLLRDARAVEEA--GA----QLIVLEAVPTLVAA---EVTRELSIPTIGIG 215 (275)
T ss_dssp EEEEEESCGGGHHHHC---CCCCSHHHHHHHHHHHHHHHHH--TC----SEEEEESCCHHHHH---HHHHHCSSCEEEES
T ss_pred EEEecCCCceEEeccCCeEEEcCCHHHHHHHHHHHHHHHHc--CC----CEEEecCCCHHHHH---HHHHhCCCCEEEEc
Confidence 874 45533 222222111 2334 34555555556666 55 33331133333222 22356777777774
No 473
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=42.70 E-value=1.8e+02 Score=25.65 Aligned_cols=75 Identities=7% Similarity=0.065 Sum_probs=48.8
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCC-CcEEEEEcC-CCcC-cHHHHHHHHHH--
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLST-KIKIEILIP-DFRN-QINHVLKIFKQ-- 162 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~-~~~i~~~~~-~~~~-~~~e~l~~l~~-- 162 (293)
.+++++.+.++++.+.|++.+-+-.|.. .+.-.+.++.+++..+ ++.+.+=.+ ++.. +..+.++.|.+
T Consensus 141 ~~~e~~~~~a~~~~~~Gf~~~KlK~g~~-------~~~d~~~v~avR~a~g~~~~L~vDaN~~w~~~~A~~~~~~l~~~~ 213 (379)
T 3r0u_A 141 GNVAETIQNIQNGVEANFTAIKVKTGAD-------FNRDIQLLKALDNEFSKNIKFRFDANQGWNLAQTKQFIEEINKYS 213 (379)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSSC-------HHHHHHHHHHHHHHCCTTSEEEEECTTCCCHHHHHHHHHHHHTSC
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeecCCC-------HHHHHHHHHHHHHhcCCCCeEEEeCCCCcCHHHHHHHHHHHhhcC
Confidence 4789999999999999999987765531 3455678888988764 567766444 3321 11234556666
Q ss_pred cCCCeee
Q psy2895 163 ALPDVLN 169 (293)
Q Consensus 163 aG~~~i~ 169 (293)
.++..+-
T Consensus 214 ~~l~~iE 220 (379)
T 3r0u_A 214 LNVEIIE 220 (379)
T ss_dssp CCEEEEE
T ss_pred CCcEEEE
Confidence 4555543
No 474
>1ji1_A Alpha-amylase I; beta/alpha barrel, hydrolase; 1.60A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1uh3_A* 2d0f_A* 1izj_A 1uh4_A* 1uh2_A* 2d0g_A* 2d0h_A* 1izk_A
Probab=42.47 E-value=24 Score=33.75 Aligned_cols=62 Identities=18% Similarity=0.210 Sum_probs=46.3
Q ss_pred HHHHHHHHH-cCCCeeeec-c-cc-c-----hHHHhhcCCCC-CHHHHHHHHHHHHHhCCC--c--eeeEeEEeec-CC
Q psy2895 154 NHVLKIFKQ-ALPDVLNHN-I-ET-V-----PRLYKKVRPGS-DYKHSLNLLKNFKKLYPN--I--LTKSGIMVGL-GE 217 (293)
Q Consensus 154 ~e~l~~l~~-aG~~~i~~~-l-es-s-----~~~~~~i~~~~-~~e~~l~~i~~~~~~~pg--i--~~~~~~ivG~-gE 217 (293)
.+.|..|++ .|++.|.+. + ++ + ..-|..+.+.+ +.++..+.++.+|++ | | .|-.++++.+ +.
T Consensus 194 ~~~LdyLk~~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~LV~~~H~~--G~~I~~~VIlD~V~NH~~~ 270 (637)
T 1ji1_A 194 DQKLGYIKKTLGANILYLNPIFKAPTNHKYDTQDYMAVDPAFGDNSTLQTLINDIHST--ANGPKGYLILDGVFNHTGD 270 (637)
T ss_dssp HHTHHHHHTTTCCCEEEESCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHCS--SSSSCCEEEEEECCSBCCT
T ss_pred HHhHHHHHhccCCCEEEECCCccCCCCCCcCccchhhhccccCCHHHHHHHHHHHHhC--CCCccceEEEEECcccCCC
Confidence 567889999 999998763 2 22 1 12233455543 889999999999999 9 9 9999999988 54
No 475
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=42.39 E-value=1.1e+02 Score=26.95 Aligned_cols=141 Identities=13% Similarity=0.116 Sum_probs=74.7
Q ss_pred CCCCChhHHHHHHHH-------HHHCCCcEEEEeeecC--------CCCC---C---C----ChhHHHHHHHHHHhhCC-
Q psy2895 85 PDPLDIEEPKKIAYT-------INKLKLNYVVITSVNR--------DDLH---D---G----GSSHFVSCIKHIRKLST- 138 (293)
Q Consensus 85 ~~~~~~eei~~~~~~-------~~~~G~~~i~l~gg~~--------~~l~---~---~----~~~~~~~ll~~i~~~~~- 138 (293)
++.++.+||.+.+++ +.+.|++.|-|.++.. |... + . ....+.++++.+++..+
T Consensus 154 p~~mt~~eI~~~i~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~ 233 (376)
T 1icp_A 154 PRRLTTDEIPQIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGS 233 (376)
T ss_dssp CEECCTTTHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCG
T ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcC
Confidence 456777777665443 3467999988888752 1110 0 1 12347888999987643
Q ss_pred -CcEEEEEcCCC----c-Cc----HHHHHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceee
Q psy2895 139 -KIKIEILIPDF----R-NQ----INHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTK 208 (293)
Q Consensus 139 -~~~i~~~~~~~----~-~~----~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~ 208 (293)
.+.+++...+. . .. ..+.++.|.++|++.+++..-+.... .+.. ...+.++.+++.. +++
T Consensus 234 ~~V~vrls~~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~----~~~~---~~~~~~~~vr~~~-~iP-- 303 (376)
T 1icp_A 234 DRVGIRISPFAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTA----WEKI---ECTESLVPMRKAY-KGT-- 303 (376)
T ss_dssp GGEEEEECTTCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC-------------CCCCSHHHHHHC-CSC--
T ss_pred CceEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCC----CCcc---ccHHHHHHHHHHc-CCC--
Confidence 35666643221 1 11 24678888899999998753221100 0000 0113345555553 232
Q ss_pred EeEEeecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 209 SGIMVGLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 209 ~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
+|.+=+-|.++..+ .+.+=+.|.|.+.
T Consensus 304 --vi~~G~i~~~~a~~---~l~~g~aD~V~~g 330 (376)
T 1icp_A 304 --FIVAGGYDREDGNR---ALIEDRADLVAYG 330 (376)
T ss_dssp --EEEESSCCHHHHHH---HHHTTSCSEEEES
T ss_pred --EEEeCCCCHHHHHH---HHHCCCCcEEeec
Confidence 22221336665544 3445558988775
No 476
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=42.30 E-value=83 Score=26.84 Aligned_cols=81 Identities=16% Similarity=0.151 Sum_probs=60.0
Q ss_pred HHHHHHHcCCCeeeeccccchHHHhhcCC---CCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhC
Q psy2895 156 VLKIFKQALPDVLNHNIETVPRLYKKVRP---GSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNH 232 (293)
Q Consensus 156 ~l~~l~~aG~~~i~~~less~~~~~~i~~---~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l 232 (293)
....+.++|++.+.++=-+.-..+ -.+ ..+.++.+..++.+.+.. ..++.+|+=.|+| +.+++.+++..+.+.
T Consensus 27 sA~~~~~aG~~ai~vs~~~~a~~~--G~pD~~~vt~~em~~~~~~I~~~~-~~PviaD~d~Gyg-~~~~~~~~v~~l~~a 102 (290)
T 2hjp_A 27 VAKLAEQAGFGGIWGSGFELSASY--AVPDANILSMSTHLEMMRAIASTV-SIPLIADIDTGFG-NAVNVHYVVPQYEAA 102 (290)
T ss_dssp HHHHHHHHTCSEEEECHHHHHHHT--TSCTTTCSCHHHHHHHHHHHHTTC-SSCEEEECTTTTS-SHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEChHHHHHhC--CCCCCCCCCHHHHHHHHHHHHhcC-CCCEEEECCCCCC-CHHHHHHHHHHHHHh
Confidence 455566789999887622211111 122 348999999999988764 4678889989988 999999999999899
Q ss_pred CCCEEEee
Q psy2895 233 NIDILTIG 240 (293)
Q Consensus 233 ~~~~i~i~ 240 (293)
|+.-+.+-
T Consensus 103 Ga~gv~iE 110 (290)
T 2hjp_A 103 GASAIVME 110 (290)
T ss_dssp TCSEEEEE
T ss_pred CCeEEEEc
Confidence 99988884
No 477
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=42.29 E-value=1.7e+02 Score=25.97 Aligned_cols=73 Identities=12% Similarity=-0.002 Sum_probs=47.3
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhC-CCcEEEEEcC-CCc-CcHHHHHHHHHHcCC
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLS-TKIKIEILIP-DFR-NQINHVLKIFKQALP 165 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~-~~~~i~~~~~-~~~-~~~~e~l~~l~~aG~ 165 (293)
+++++.+.++++.+.|++.+-+--+ + ..+ .+.++.+++.. |++.+.+=.+ ++. .+ .+.++.|.+.|+
T Consensus 163 ~~e~~~~~a~~~~~~G~~~iKlKv~-~----~~d----~~~v~avR~a~G~~~~L~vDaN~~w~~~~-~~~~~~l~~~~i 232 (400)
T 3mwc_A 163 RIETLIHQVEESLQEGYRRIKIKIK-P----GWD----VEPLQETRRAVGDHFPLWTDANSSFELDQ-WETFKAMDAAKC 232 (400)
T ss_dssp CHHHHHHHHHHHHHHTCSCEEEECB-T----TBS----HHHHHHHHHHHCTTSCEEEECTTCCCGGG-HHHHHHHGGGCC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeC-c----chH----HHHHHHHHHhcCCCCEEEEeCCCCCCHHH-HHHHHHHHhcCC
Confidence 4899999999998889987766432 1 111 35667777654 5666666444 322 22 456777877888
Q ss_pred Ceeeec
Q psy2895 166 DVLNHN 171 (293)
Q Consensus 166 ~~i~~~ 171 (293)
..+-=+
T Consensus 233 ~~iEqP 238 (400)
T 3mwc_A 233 LFHEQP 238 (400)
T ss_dssp SCEESC
T ss_pred CEEeCC
Confidence 777533
No 478
>3m07_A Putative alpha amylase; IDP00968, csgid, structural genomics, center for structural genomics of infectious diseases, unknown function; HET: BTB PG4 PGE; 1.40A {Salmonella enterica subsp}
Probab=42.22 E-value=27 Score=33.32 Aligned_cols=61 Identities=7% Similarity=-0.046 Sum_probs=45.2
Q ss_pred HHHHHHHHHHcCCCeeee-cc-cc---c-----hHHHhhcCCCC-CHHHHHHHHHHHHHhCCCceeeEeEEeec
Q psy2895 153 INHVLKIFKQALPDVLNH-NI-ET---V-----PRLYKKVRPGS-DYKHSLNLLKNFKKLYPNILTKSGIMVGL 215 (293)
Q Consensus 153 ~~e~l~~l~~aG~~~i~~-~l-es---s-----~~~~~~i~~~~-~~e~~l~~i~~~~~~~pgi~~~~~~ivG~ 215 (293)
+.+.|..|++.|++.|.+ ++ +. + ..-|-.+.+.+ +.+++.+.++.++++ ||.|-.++++.+
T Consensus 156 ~~~~L~yl~~lGv~~v~l~Pi~~~~~~~~~GY~~~~~~~~~~~~G~~~~~~~lv~~~H~~--Gi~VilD~V~NH 227 (618)
T 3m07_A 156 AIAKLPYLAELGVTVIEVMPVAQFGGERGWGYDGVLLYAPHSAYGTPDDFKAFIDAAHGY--GLSVVLDIVLNH 227 (618)
T ss_dssp HHTTHHHHHHHTCCEEEECCCEECSSSCCCSTTCCEEEEECTTTCCHHHHHHHHHHHHHT--TCEEEEEECCSC
T ss_pred HHHHHHHHHHcCCCEEEeCChhccCCCCCCCcCcccccccCcCcCCHHHHHHHHHHHHHC--CCEEEEeecCcc
Confidence 356789999999999876 33 11 1 11122445443 889999999999999 999999999886
No 479
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=42.09 E-value=63 Score=30.32 Aligned_cols=97 Identities=9% Similarity=0.099 Sum_probs=58.5
Q ss_pred HHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcCcHHHHHHHHHH-cCCCeee
Q psy2895 92 EPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRNQINHVLKIFKQ-ALPDVLN 169 (293)
Q Consensus 92 ei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~~~~e~l~~l~~-aG~~~i~ 169 (293)
...+.++.+.+.|+.+|.+++-+.+-... +. + .++++.+++.. .+-+..+ |..+ .+.+.++.+ .|++.+-
T Consensus 453 ~~~e~a~~~~~~Ga~~il~t~~~~dG~~~-G~-d-~~li~~l~~~~---~iPVIasGGi~s--~~d~~~~~~~~G~~gvi 524 (555)
T 1jvn_A 453 GVWELTRACEALGAGEILLNCIDKDGSNS-GY-D-LELIEHVKDAV---KIPVIASSGAGV--PEHFEEAFLKTRADACL 524 (555)
T ss_dssp EHHHHHHHHHHTTCCEEEECCGGGTTTCS-CC-C-HHHHHHHHHHC---SSCEEECSCCCS--HHHHHHHHHHSCCSEEE
T ss_pred CHHHHHHHHHHcCCCEEEEeCCCCCCCCC-CC-C-HHHHHHHHHhC---CccEEEECCCCC--HHHHHHHHHhcCChHHH
Confidence 35677888889999999998865422211 11 1 36667777643 3334444 5555 666666666 7999877
Q ss_pred eccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceee
Q psy2895 170 HNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTK 208 (293)
Q Consensus 170 ~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~ 208 (293)
++ ..+ ..+..++++..+ .+++. |+.+.
T Consensus 525 vg----~a~---~~~~~~~~e~~~---~l~~~--gi~~r 551 (555)
T 1jvn_A 525 GA----GMF---HRGEFTVNDVKE---YLLEH--GLKVR 551 (555)
T ss_dssp ES----HHH---HTTSCCHHHHHH---HHHHT--TCCCC
T ss_pred HH----HHH---HcCCCCHHHHHH---HHHHC--CCccc
Confidence 65 122 233456666555 45666 77653
No 480
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=41.96 E-value=1.3e+02 Score=26.48 Aligned_cols=77 Identities=10% Similarity=0.100 Sum_probs=52.2
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhh-CCCcEEEEEcC-CCcC-cHHHHHHHHHHcCC
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKL-STKIKIEILIP-DFRN-QINHVLKIFKQALP 165 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~-~~~~~i~~~~~-~~~~-~~~e~l~~l~~aG~ 165 (293)
++++..+.++.+.+.|++.+-+-.|.. + .+. .+.++.+++. .+++.+.+=.+ ++.. +..+.++.|.+.|+
T Consensus 164 ~~e~~~~~a~~~~~~Gf~~vKik~g~~-~-----~~~-~e~v~avr~a~g~d~~l~vDan~~~~~~~a~~~~~~l~~~~i 236 (388)
T 2nql_A 164 TLKARGELAKYWQDRGFNAFKFATPVA-D-----DGP-AAEIANLRQVLGPQAKIAADMHWNQTPERALELIAEMQPFDP 236 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGC-T-----TCH-HHHHHHHHHHHCTTSEEEEECCSCSCHHHHHHHHHHHGGGCC
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCCCC-C-----hHH-HHHHHHHHHHhCCCCEEEEECCCCCCHHHHHHHHHHHhhcCC
Confidence 789999999999999999887766642 1 245 7888888875 45677766444 3321 12356667777788
Q ss_pred Ceeeecc
Q psy2895 166 DVLNHNI 172 (293)
Q Consensus 166 ~~i~~~l 172 (293)
+.+.-++
T Consensus 237 ~~iEqP~ 243 (388)
T 2nql_A 237 WFAEAPV 243 (388)
T ss_dssp SCEECCS
T ss_pred CEEECCC
Confidence 8775433
No 481
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=41.88 E-value=1.1e+02 Score=25.65 Aligned_cols=57 Identities=12% Similarity=0.069 Sum_probs=40.2
Q ss_pred HHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHH
Q psy2895 156 VLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEIL 223 (293)
Q Consensus 156 ~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~ 223 (293)
....|+++|++.+-+|. ||+-. +. +-+-+.+-+.++.+.++ |+.+ |+-.|||.++++
T Consensus 80 S~~mL~d~G~~~ViiGH--SERR~--~f-~Etd~~v~~Kv~~Al~~--GL~p----I~CvGEtleere 136 (257)
T 2yc6_A 80 SVEMLQDMGLKHVIVGH--SERRR--IM-GETDEQSAKKAKRALEK--GMTV----IFCVGETLDERK 136 (257)
T ss_dssp CHHHHHHTTCCEEEESC--HHHHH--TS-CCCHHHHHHHHHHHHHT--TCEE----EEEECCCHHHHH
T ss_pred CHHHHHHcCCCEEEECc--hhhcc--cc-CCCHHHHHHHHHHHHHC--CCEE----EEEcCCcHHHHh
Confidence 35667889999988874 43221 22 34677788889999999 8854 566699988744
No 482
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=41.79 E-value=1.5e+02 Score=24.75 Aligned_cols=76 Identities=9% Similarity=-0.054 Sum_probs=46.3
Q ss_pred CCChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCC
Q psy2895 87 PLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPD 166 (293)
Q Consensus 87 ~~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~ 166 (293)
.++.+++...++.+.+.|+.+|--+.|..+ .....+.+.-+.+.+ .+.+.|++.- |..+ .+.+..+.++|.+
T Consensus 169 ~Lt~eei~~A~~ia~eaGADfVKTSTGf~~--~GAT~edV~lm~~~v---g~~v~VKaAG-GIrt--~~~al~mi~aGA~ 240 (260)
T 3r12_A 169 YLDTEEKIAACVISKLAGAHFVKTSTGFGT--GGATAEDVHLMKWIV---GDEMGVKASG-GIRT--FEDAVKMIMYGAD 240 (260)
T ss_dssp GCCHHHHHHHHHHHHHTTCSEEECCCSSSS--CCCCHHHHHHHHHHH---CTTSEEEEES-SCCS--HHHHHHHHHTTCS
T ss_pred CCCHHHHHHHHHHHHHhCcCEEEcCCCCCC--CCCCHHHHHHHHHHh---CCCceEEEeC-CCCC--HHHHHHHHHcCCc
Confidence 478899988888888899999866555321 122234443322222 2356777643 4444 4555566689999
Q ss_pred eeee
Q psy2895 167 VLNH 170 (293)
Q Consensus 167 ~i~~ 170 (293)
++-.
T Consensus 241 RiGt 244 (260)
T 3r12_A 241 RIGT 244 (260)
T ss_dssp EEEE
T ss_pred eeec
Confidence 8654
No 483
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=41.72 E-value=1.1e+02 Score=26.91 Aligned_cols=74 Identities=7% Similarity=0.004 Sum_probs=47.2
Q ss_pred CChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcCcHHHHHHHHHHcC-C
Q psy2895 88 LDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRNQINHVLKIFKQAL-P 165 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~~~~e~l~~l~~aG-~ 165 (293)
.+.++..+.++.+.+.|+..|.+.++.....+... .+.++.+++.. .+-+... ++ + .+.++.+-+.| +
T Consensus 248 ~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~----~~~~~~v~~~~---~iPvi~~Ggi-t--~~~a~~~l~~g~a 317 (364)
T 1vyr_A 248 NEEADALYLIEELAKRGIAYLHMSETDLAGGKPYS----EAFRQKVRERF---HGVIIGAGAY-T--AEKAEDLIGKGLI 317 (364)
T ss_dssp THHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCC----HHHHHHHHHHC---CSEEEEESSC-C--HHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEecCcccCCCccc----HHHHHHHHHHC---CCCEEEECCc-C--HHHHHHHHHCCCc
Confidence 35677888899999999999988875321111111 24567777764 2344443 55 4 56666666666 8
Q ss_pred Ceeeec
Q psy2895 166 DVLNHN 171 (293)
Q Consensus 166 ~~i~~~ 171 (293)
|.+.++
T Consensus 318 D~V~~g 323 (364)
T 1vyr_A 318 DAVAFG 323 (364)
T ss_dssp SEEEES
T ss_pred cEEEEC
Confidence 998875
No 484
>3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans}
Probab=41.69 E-value=68 Score=29.32 Aligned_cols=56 Identities=16% Similarity=0.175 Sum_probs=42.0
Q ss_pred HHHHHHHHHHcCCCeeeeccccchHHHhhcCCCCC---HHHHHHHHHHHHHhCCCceeeEeE
Q psy2895 153 INHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSD---YKHSLNLLKNFKKLYPNILTKSGI 211 (293)
Q Consensus 153 ~~e~l~~l~~aG~~~i~~~less~~~~~~i~~~~~---~e~~l~~i~~~~~~~pgi~~~~~~ 211 (293)
.+|.++.|+++|++.+.+++ +-.++...=....+ ++-+-+.+..+++. ||.+-.++
T Consensus 61 ~~eDi~lm~~~G~~~~R~si-~Wsri~P~G~g~~n~~G~~~y~~lid~l~~~--GI~p~vtL 119 (453)
T 3ahx_A 61 YKEDVQLLKSLGIKSYRFSI-AWPRIFPKGFGEINQKGIQFYRDLIDELIKN--DIEPAITI 119 (453)
T ss_dssp HHHHHHHHHHTTCCEEEEEC-CHHHHCTTSSSSCCHHHHHHHHHHHHHHHHT--TCEEEEEE
T ss_pred HHHHHHHHHHhCCCeEeccc-CHHHhccCCCCCcCHHHHHHHHHHHHHHHHC--CCEEEEEe
Confidence 37889999999999999987 43566544211235 78888999999999 99765554
No 485
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=41.66 E-value=20 Score=34.61 Aligned_cols=34 Identities=18% Similarity=0.185 Sum_probs=28.8
Q ss_pred hhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec
Q psy2895 180 KKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL 215 (293)
Q Consensus 180 ~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~ 215 (293)
..+.+. .+.+++.+.++.+|++ ||.|-.++++.+
T Consensus 107 ~~idp~~Gt~~dfk~Lv~~aH~~--GikVilD~V~NH 141 (683)
T 3bmv_A 107 KRTNPYFGSFTDFQNLINTAHAH--NIKVIIDFAPNH 141 (683)
T ss_dssp EEECTTTCCHHHHHHHHHHHHHT--TCEEEEEECTTE
T ss_pred cccCcccCCHHHHHHHHHHHHHC--CCEEEEEEcccc
Confidence 345554 3899999999999999 999999999876
No 486
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=41.61 E-value=76 Score=26.30 Aligned_cols=80 Identities=10% Similarity=0.068 Sum_probs=45.5
Q ss_pred hHHHHHHHHHHhhCCCcEEEEEcCC-CcCcHHHHHHHHHHcCCCeeeeccccchHH--HhhcC-C-----CCCHHHHHHH
Q psy2895 124 SHFVSCIKHIRKLSTKIKIEILIPD-FRNQINHVLKIFKQALPDVLNHNIETVPRL--YKKVR-P-----GSDYKHSLNL 194 (293)
Q Consensus 124 ~~~~~ll~~i~~~~~~~~i~~~~~~-~~~~~~e~l~~l~~aG~~~i~~~less~~~--~~~i~-~-----~~~~e~~l~~ 194 (293)
..+.+.++.+++.+-+ .|++.... ......+..+.++++|+....+.... +-. ...+. + ....+.+.+.
T Consensus 41 ~~~~~~l~~~~~~G~~-~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~-p~~~~~~~l~~~d~~~r~~~~~~~~~~ 118 (290)
T 2zvr_A 41 GDLRKGMELAKRVGYQ-AVEIAVRDPSIVDWNEVKILSEELNLPICAIGTGQ-AYLADGLSLTHPNDEIRKKAIERVVKH 118 (290)
T ss_dssp HHHHHHHHHHHHHTCS-EEEEECSCGGGSCHHHHHHHHHHHTCCEEEEECTH-HHHTTCCCTTCSSHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHhCCC-EEEEcCCCcchhhHHHHHHHHHHcCCeEEEEeccC-ccccCCCCCCCCCHHHHHHHHHHHHHH
Confidence 3577888888877433 67776532 22334667777888898865554310 000 00011 1 1134667777
Q ss_pred HHHHHHhCCCcee
Q psy2895 195 LKNFKKLYPNILT 207 (293)
Q Consensus 195 i~~~~~~~pgi~~ 207 (293)
++.+++. |...
T Consensus 119 i~~A~~l--G~~~ 129 (290)
T 2zvr_A 119 TEVAGMF--GALV 129 (290)
T ss_dssp HHHHHHH--TCEE
T ss_pred HHHHHHc--CCCE
Confidence 8888888 8754
No 487
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=41.60 E-value=1.1e+02 Score=25.42 Aligned_cols=57 Identities=12% Similarity=-0.033 Sum_probs=40.8
Q ss_pred HHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHH
Q psy2895 156 VLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEIL 223 (293)
Q Consensus 156 ~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~ 223 (293)
....|+++|++.+-+|. |++-. +. +-+-+.+-+.++.+.++ |+.+ |+-.|||.++..
T Consensus 79 S~~mL~d~G~~~ViiGH--SERR~--~f-~Etd~~v~~Kv~~Al~~--GL~p----I~CvGEtleere 135 (248)
T 1r2r_A 79 SPGMIKDCGATWVVLGH--SERRH--VF-GESDELIGQKVAHALSE--GLGV----IACIGEKLDERE 135 (248)
T ss_dssp CHHHHHHTTCCEEEESC--HHHHH--TS-CCCHHHHHHHHHHHHHT--TCEE----EEEECCCHHHHH
T ss_pred CHHHHHHcCCCEEEECC--hhhhc--cc-CCCHHHHHHHHHHHHHC--CCEE----EEEcCCcHHHHh
Confidence 35677889999988874 43221 22 34677788889999999 8844 566699988876
No 488
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=41.57 E-value=1.8e+02 Score=25.38 Aligned_cols=110 Identities=5% Similarity=0.040 Sum_probs=56.4
Q ss_pred ChhHHHHHHHHHHhhCCC--cEEEEEcCCCcCcHHHHHHHHHHcCCC-eeeecccc-chHHHhhcCCCCCHHHHHHHHHH
Q psy2895 122 GSSHFVSCIKHIRKLSTK--IKIEILIPDFRNQINHVLKIFKQALPD-VLNHNIET-VPRLYKKVRPGSDYKHSLNLLKN 197 (293)
Q Consensus 122 ~~~~~~~ll~~i~~~~~~--~~i~~~~~~~~~~~~e~l~~l~~aG~~-~i~~~les-s~~~~~~i~~~~~~e~~l~~i~~ 197 (293)
+.+.+.+-++...+..++ +.+.+.-. ..++..+.++.+.++|.+ .+.+++-+ ... ....-..+++...+.++.
T Consensus 111 G~~~~~~~l~~~~~~~~~~pvivsI~g~-~~~d~~~~a~~l~~~g~~d~ielNisCPn~~--G~~~l~~~~e~l~~il~a 187 (345)
T 3oix_A 111 GINYYLDYVTELQKQPDSKNHFLSLVGM-SPEETHTILXMVEASKYQGLVELNLSCPNVP--GXPQIAYDFETTDQILSE 187 (345)
T ss_dssp CHHHHHHHHHHHHHSTTCCCCEEEECCS-SHHHHHHHHHHHHHSSCCSEEEEECSCCCST--TCCCGGGCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhhccCCCCEEEEecCC-CHHHHHHHHHHHhccCCCcEEEEecCCCCcC--CchhhcCCHHHHHHHHHH
Confidence 456666655543222222 23444211 111124456666667877 78777654 211 110112467778888888
Q ss_pred HHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEE
Q psy2895 198 FKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDIL 237 (293)
Q Consensus 198 ~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i 237 (293)
+++.. .+++..-+-. +.+.+++.+.++.+..-+++.+
T Consensus 188 v~~~~-~~PV~vKi~p--~~~~~~~a~~~~~aga~~i~~i 224 (345)
T 3oix_A 188 VFTYF-TKPLGIKLPP--YFDIVHFDQAAAIFNXYPLTFV 224 (345)
T ss_dssp HTTTC-CSCEEEEECC--CCCHHHHHHHHHHHTTSCCSEE
T ss_pred HHHHh-CCCeEEEECC--CCCHHHHHHHHHHhCCCceEEE
Confidence 87762 3333222222 4566777777666666666654
No 489
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=41.47 E-value=51 Score=28.24 Aligned_cols=52 Identities=12% Similarity=0.183 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHHHHHHHHHhCCCCEEEe
Q psy2895 187 DYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTI 239 (293)
Q Consensus 187 ~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~~~l~~l~~l~~~~i~i 239 (293)
+.++.+..++.+.+..+ .++.+|+=.|+|.+.+++.+++..+.+.|+.-+.|
T Consensus 62 t~~em~~~~~~I~~~~~-~PviaD~d~Gyg~~~~~~~~~v~~l~~aGa~gv~i 113 (295)
T 1xg4_A 62 TLDDVLTDIRRITDVCS-LPLLVDADIGFGSSAFNVARTVKSMIKAGAAGLHI 113 (295)
T ss_dssp CHHHHHHHHHHHHHHCC-SCEEEECTTCSSSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHHHHhhCC-CCEEecCCcccCCCHHHHHHHHHHHHHcCCeEEEE
No 490
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=41.43 E-value=2e+02 Score=26.03 Aligned_cols=127 Identities=13% Similarity=0.086 Sum_probs=76.9
Q ss_pred HHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcCCCcCcHHHHHHHHHHcCCCeeeecc
Q psy2895 93 PKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNI 172 (293)
Q Consensus 93 i~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~~~~~~~~e~l~~l~~aG~~~i~~~l 172 (293)
..+.++.+.+.|+..+++.+... ....+.+.++.+++..|+..+- ..+..+ .+.+..+.++|++.+.++.
T Consensus 234 ~~~~a~~l~~~G~d~ivi~~a~g------~~~~~~~~i~~l~~~~p~~pvi--~G~v~t--~~~a~~~~~~Gad~I~vg~ 303 (491)
T 1zfj_A 234 TFERAEALFEAGADAIVIDTAHG------HSAGVLRKIAEIRAHFPNRTLI--AGNIAT--AEGARALYDAGVDVVKVGI 303 (491)
T ss_dssp HHHHHHHHHHHTCSEEEECCSCT------TCHHHHHHHHHHHHHCSSSCEE--EEEECS--HHHHHHHHHTTCSEEEECS
T ss_pred HHHHHHHHHHcCCCeEEEeeecC------cchhHHHHHHHHHHHCCCCcEe--CCCccC--HHHHHHHHHcCCCEEEECc
Confidence 45667777888999988765321 1346778888888876554443 223333 6777888899999998874
Q ss_pred cc-c---hHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEe-ecCCCHHHHHHHHHHHHhCCCCEEEee
Q psy2895 173 ET-V---PRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMV-GLGENDEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 173 es-s---~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~iv-G~gEt~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
.. + .+.+.... .-+.+-+.++...+.+. ++++ |. |=-.|.+|+.+.+ .+|.+.+.+.
T Consensus 304 g~g~~~~tr~~~~~~-~p~~~~l~~~~~~~~~~--~ipv----ia~GGi~~~~di~kal----~~GA~~v~vG 365 (491)
T 1zfj_A 304 GPGSICTTRVVAGVG-VPQVTAIYDAAAVAREY--GKTI----IADGGIKYSGDIVKAL----AAGGNAVMLG 365 (491)
T ss_dssp SCCTTBCHHHHTCCC-CCHHHHHHHHHHHHHHT--TCEE----EEESCCCSHHHHHHHH----HTTCSEEEES
T ss_pred cCCcceEEeeecCCC-CCcHHHHHHHHHHHhhc--CCCE----EeeCCCCCHHHHHHHH----HcCCcceeeC
Confidence 22 1 23332221 22344444444444444 5543 33 2246778877665 4799988875
No 491
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=41.42 E-value=49 Score=27.44 Aligned_cols=144 Identities=13% Similarity=0.144 Sum_probs=71.3
Q ss_pred ChhHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEc-CCCcCcHHHHHHHHHHcCCCe
Q psy2895 89 DIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILI-PDFRNQINHVLKIFKQALPDV 167 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~-~~~~~~~~e~l~~l~~aG~~~ 167 (293)
..+.+.+.++.+..+|++.|++..|..+.-.....+.+.+.++.+.+.....+|++.. |. ..+..+..+.+.+.+-..
T Consensus 100 ~~~~~~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~-~~~~~~~~~l~~~~~~~~ 178 (290)
T 3tva_A 100 RVAEMKEISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHLETG-QESADHLLEFIEDVNRPN 178 (290)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEECC-SSCHHHHHHHHHHHCCTT
T ss_pred HHHHHHHHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEEecC-CCCHHHHHHHHHhcCCCC
Confidence 3566777777778889999988655322111112233444444443321112344432 21 122255566666666666
Q ss_pred eeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeE-------------EeecCCCHHHHHHHHHHHHhCCC
Q psy2895 168 LNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGI-------------MVGLGENDEEILTVIHDMRNHNI 234 (293)
Q Consensus 168 i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~-------------ivG~gEt~ed~~~~l~~l~~l~~ 234 (293)
+.+-+++.--. +..+.++.+++ +.+......+.++-.. -+-+|+-.-++.+.+..+++.|.
T Consensus 179 ~g~~~D~~h~~---~~g~~d~~~~l---~~~~~~i~~vHl~D~~~~~~~~~g~~~~~~~~~G~G~id~~~~~~~L~~~gy 252 (290)
T 3tva_A 179 LGINFDPANMI---LYGTGNPIEAL---RKVARYVRSIHCKDALWAPVNERGKSWGQEVALGTGDVGMEAYLTTLWEIGY 252 (290)
T ss_dssp EEEEECHHHHH---HTTCSCHHHHH---HHHGGGEEEEEECEEECCCGGGBTTBCCEEESTTSSSSCHHHHHHHHHHTTC
T ss_pred EEEEeccHHHH---HhCCCCHHHHH---HHHHhhheEEEeccccCCCccccccccccccCCCCceeCHHHHHHHHHHcCC
Confidence 66666552111 11124554443 3443332223332111 01125555678899999999998
Q ss_pred C-EEEe
Q psy2895 235 D-ILTI 239 (293)
Q Consensus 235 ~-~i~i 239 (293)
+ .+.+
T Consensus 253 ~g~~~l 258 (290)
T 3tva_A 253 RGPLTI 258 (290)
T ss_dssp CSCEEE
T ss_pred CCcEEE
Confidence 7 4444
No 492
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=41.38 E-value=1e+02 Score=25.70 Aligned_cols=57 Identities=12% Similarity=-0.025 Sum_probs=39.7
Q ss_pred HHHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHH
Q psy2895 156 VLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEIL 223 (293)
Q Consensus 156 ~l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~ 223 (293)
....|+++|++.+-+|. |++-. +. +-+-+.+-+.++.+.++ |+.+ |+-.|||.++.+
T Consensus 82 S~~mL~d~G~~~ViiGH--SERR~--~f-~Etd~~V~~Kv~~Al~~--GL~p----IlCvGEtleere 138 (254)
T 3m9y_A 82 SPVALADLGVKYVVIGH--SERRE--LF-HETDEEINKKAHAIFKH--GMTP----IICVGETDEERE 138 (254)
T ss_dssp CHHHHHHTTCCEEEESC--HHHHH--HS-CCCHHHHHHHHHHHHHT--TCEE----EEEECCCHHHHH
T ss_pred CHHHHHHcCCCEEEECc--ccccC--cc-CCCHHHHHHHHHHHHHC--CCEE----EEEcCCcHHHHH
Confidence 35677889999988874 43221 12 34666677778999999 8854 566699988754
No 493
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=41.35 E-value=1.3e+02 Score=25.96 Aligned_cols=13 Identities=15% Similarity=0.227 Sum_probs=7.9
Q ss_pred HHHHHHHHhCCCcee
Q psy2895 193 NLLKNFKKLYPNILT 207 (293)
Q Consensus 193 ~~i~~~~~~~pgi~~ 207 (293)
+.++.+++. |+.+
T Consensus 229 ~l~~~l~~~--~i~l 241 (326)
T 3pao_A 229 RLMRRLIDE--QIPL 241 (326)
T ss_dssp HHHHHHHHH--TCCE
T ss_pred HHHHHHHHc--CCeE
Confidence 356667777 6643
No 494
>3ucq_A Amylosucrase; thermostability, amylose synthesis, sucrose isomerization, beta/alpha-barrel, carbohydrate binding, transferase; 1.97A {Deinococcus geothermalis} PDB: 3uer_A*
Probab=41.22 E-value=22 Score=34.15 Aligned_cols=61 Identities=13% Similarity=0.155 Sum_probs=45.8
Q ss_pred HHHHHHHHHHcCCCeeeec-c-cc----chH-----HHhhcCCC-CCHHHHHHHHHHHHHhCCCceeeEeEEeec
Q psy2895 153 INHVLKIFKQALPDVLNHN-I-ET----VPR-----LYKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGL 215 (293)
Q Consensus 153 ~~e~l~~l~~aG~~~i~~~-l-es----s~~-----~~~~i~~~-~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~ 215 (293)
+.+.|..|++.|++.|.++ + ++ ++. -|..+.+. .+.+++.+.++.+++. ||.|-.++++.+
T Consensus 113 l~~~LdyL~~lGv~~v~l~P~~~~~~~~~~~GY~~~dy~~i~~~~Gt~~d~~~lv~~~h~~--Gi~Vi~D~V~NH 185 (655)
T 3ucq_A 113 VEERLDYLEGLGVKYLHLMPLLRPREGENDGGYAVQDYRAVRPDLGTMDDLSALARALRGR--GISLVLDLVLNH 185 (655)
T ss_dssp HHTTHHHHHHTTCCEEEECCCEEECSSCCGGGTSEEEEEEECGGGCCHHHHHHHHHHHHHT--TCEEEEEECCSE
T ss_pred HHHhhHHHHHcCCCEEEECCCcCCCCCCCCCCcCCcCcCccCccCCCHHHHHHHHHHHHHC--CCEEEEEeeccc
Confidence 3567889999999998763 2 21 111 23335543 4899999999999999 999999999988
No 495
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=41.19 E-value=1.8e+02 Score=25.45 Aligned_cols=75 Identities=7% Similarity=0.103 Sum_probs=44.6
Q ss_pred ChhHHHHHHHHHHHCCCc-----EEEEeeecCCC-----------CC--------CCChhHHHHHHHHHHhhCCCcEEEE
Q psy2895 89 DIEEPKKIAYTINKLKLN-----YVVITSVNRDD-----------LH--------DGGSSHFVSCIKHIRKLSTKIKIEI 144 (293)
Q Consensus 89 ~~eei~~~~~~~~~~G~~-----~i~l~gg~~~~-----------l~--------~~~~~~~~~ll~~i~~~~~~~~i~~ 144 (293)
+.+-..+.++.+.+.|+. .|-|+.-..+. +. ..+.+.+..|.+..++. ++.+
T Consensus 19 dle~Ak~lI~~A~~aGad~~~d~avKfQt~~~d~l~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~----Gi~~ 94 (350)
T 3g8r_A 19 NVEHGVALIRAIRESCQGFDFDFGFKLQYRNLDTFIHSSFKGRDDVKYVKRFEETRLQPEQMQKLVAEMKAN----GFKA 94 (350)
T ss_dssp CSHHHHHHHHHHHHHTTTCCSEEEEEEEECCHHHHBCGGGTTCCSSSSHHHHHHTCCCHHHHHHHHHHHHHT----TCEE
T ss_pred cHHHHHHHHHHHHHhCCcccCCeeEEccccchhhhcChhccCccHHHHHHHHHHhcCCHHHHHHHHHHHHHc----CCcE
Confidence 456666666666666765 77776432110 00 02344555666666654 4555
Q ss_pred Ec-CCCcCcHHHHHHHHHHcCCCeeeec
Q psy2895 145 LI-PDFRNQINHVLKIFKQALPDVLNHN 171 (293)
Q Consensus 145 ~~-~~~~~~~~e~l~~l~~aG~~~i~~~ 171 (293)
++ | .+ .+.++.|.+.|++.+.++
T Consensus 95 ~st~--fD--~~svd~l~~~~v~~~KI~ 118 (350)
T 3g8r_A 95 ICTP--FD--EESVDLIEAHGIEIIKIA 118 (350)
T ss_dssp EEEE--CS--HHHHHHHHHTTCCEEEEC
T ss_pred Eecc--CC--HHHHHHHHHcCCCEEEEC
Confidence 44 4 33 567888888899999886
No 496
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=41.19 E-value=1.7e+02 Score=24.96 Aligned_cols=137 Identities=12% Similarity=0.079 Sum_probs=74.9
Q ss_pred HHHCCCcEEEEeeec------CCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcC--cHHHHHHHHHHcCCCeeee
Q psy2895 100 INKLKLNYVVITSVN------RDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRN--QINHVLKIFKQALPDVLNH 170 (293)
Q Consensus 100 ~~~~G~~~i~l~gg~------~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~--~~~e~l~~l~~aG~~~i~~ 170 (293)
+.+.|++-|.++|.. .||....+.+.+...++.|.+.. +..|-+=.+ |+.+ +..+.++++.++|+..+++
T Consensus 35 ~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~-~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~i 113 (295)
T 1s2w_A 35 VQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDAS-DVPILLDADTGYGNFNNARRLVRKLEDRGVAGACL 113 (295)
T ss_dssp HHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHTC-SSCEEEECCSSCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcC-CCCEEecCCCCCCCHHHHHHHHHHHHHcCCcEEEE
Confidence 344588888776531 13322234566777777776643 233433223 4433 1245677788899998876
Q ss_pred ccccchHHHhhcC---C-CCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCC------HHHHHHHHHHHHhCCCCEEEee
Q psy2895 171 NIETVPRLYKKVR---P-GSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGEN------DEEILTVIHDMRNHNIDILTIG 240 (293)
Q Consensus 171 ~less~~~~~~i~---~-~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt------~ed~~~~l~~l~~l~~~~i~i~ 240 (293)
-=+..++..-.+. + =.+.++..+.|+.++++ +.. .-.+|.|-.+. .++..+-.....+.|.+.+.+-
T Consensus 114 ED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a--~~~-~~~~i~aRtda~~a~~g~~~ai~Ra~ay~eAGAd~i~~e 190 (295)
T 1s2w_A 114 EDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDS--QTD-PDFCIVARVEAFIAGWGLDEALKRAEAYRNAGADAILMH 190 (295)
T ss_dssp ECBCC--------CTTCCBCCHHHHHHHHHHHHHH--CSS-TTCEEEEEECTTTTTCCHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CCCCCCccccccCCCCCcccCHHHHHHHHHHHHHh--ccc-CCcEEEEeehHHhccccHHHHHHHHHHHHHcCCCEEEEc
Confidence 3222233332232 1 13677888999999888 431 11234443332 4888888888899999988773
No 497
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=41.02 E-value=2e+02 Score=25.76 Aligned_cols=74 Identities=12% Similarity=0.121 Sum_probs=47.6
Q ss_pred CCh-hHHHHHHHHHHHCCCcEEEEeeecCCCCCCCChhHHHHHHHHHHhh-CCCcEEEEEcC-CCcC-cHHHHHHHHHHc
Q psy2895 88 LDI-EEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKL-STKIKIEILIP-DFRN-QINHVLKIFKQA 163 (293)
Q Consensus 88 ~~~-eei~~~~~~~~~~G~~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~-~~~~~i~~~~~-~~~~-~~~e~l~~l~~a 163 (293)
.++ +++.+.++++.+.|++.+-+-.|. +.+.-.+.++.+++. .+++.+.+=.+ ++.. +..+.++.|.+.
T Consensus 183 ~~~~e~~~~~a~~~~~~Gf~~vKik~g~-------~~~~d~e~v~avR~avG~d~~l~vDan~~~~~~eai~~~~~L~~~ 255 (428)
T 3bjs_A 183 YQPKESLAEEAQEYIARGYKALKLRIGD-------AARVDIERVRHVRKVLGDEVDILTDANTAYTMADARRVLPVLAEI 255 (428)
T ss_dssp SCCHHHHHHHHHHHHHHTCSEEEEECCS-------CHHHHHHHHHHHHHHHCTTSEEEEECTTCCCHHHHHHHHHHHHHT
T ss_pred CChHHHHHHHHHHHHHCCCCEEEECCCC-------CHHHHHHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHHHHhc
Confidence 356 888889998888899988776553 134556788888876 45677766444 3221 113445556666
Q ss_pred CCCee
Q psy2895 164 LPDVL 168 (293)
Q Consensus 164 G~~~i 168 (293)
|++.+
T Consensus 256 ~i~~i 260 (428)
T 3bjs_A 256 QAGWL 260 (428)
T ss_dssp TCSCE
T ss_pred CCCEE
Confidence 76554
No 498
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=40.77 E-value=1.7e+02 Score=24.98 Aligned_cols=100 Identities=9% Similarity=0.042 Sum_probs=43.9
Q ss_pred HCCCcEEEEee-e------cCCCCCCCChhHHHHHHHHHHhhCCCcEEEEEcC-CCcC--cHHHHHHHHHHcCCCeeeec
Q psy2895 102 KLKLNYVVITS-V------NRDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIP-DFRN--QINHVLKIFKQALPDVLNHN 171 (293)
Q Consensus 102 ~~G~~~i~l~g-g------~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~~~~-~~~~--~~~e~l~~l~~aG~~~i~~~ 171 (293)
+.|++-|.++| + ..||....+.+.+...++.|.+.. +..|-+=.+ |+.+ +..+.++.+.++|+..+++-
T Consensus 40 ~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~-~~PviaD~d~Gyg~~~~v~~~v~~l~~aGaagv~iE 118 (298)
T 3eoo_A 40 AVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNAT-NLPLLVDIDTGWGGAFNIARTIRSFIKAGVGAVHLE 118 (298)
T ss_dssp HHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHC-CSCEEEECTTCSSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhc-CCeEEEECCCCCCCHHHHHHHHHHHHHhCCeEEEEC
Confidence 34677666655 1 012222223455555555555432 222333222 3322 12345566666777766642
Q ss_pred cccchHHHhhcCC--CCCHHHHHHHHHHHHHhC
Q psy2895 172 IETVPRLYKKVRP--GSDYKHSLNLLKNFKKLY 202 (293)
Q Consensus 172 less~~~~~~i~~--~~~~e~~l~~i~~~~~~~ 202 (293)
=+..++..-.+.. =.+.++..+.|+.++++.
T Consensus 119 Dq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~ 151 (298)
T 3eoo_A 119 DQVGQKRCGHRPGKECVPAGEMVDRIKAAVDAR 151 (298)
T ss_dssp CBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHC
T ss_pred CCCCCcccCCCCCCeecCHHHHHHHHHHHHHhc
Confidence 1111111111110 125566666666666653
No 499
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=40.75 E-value=1e+02 Score=25.75 Aligned_cols=111 Identities=14% Similarity=0.091 Sum_probs=63.4
Q ss_pred CChhHHHHHHHHHHHCCC---cEEEEeeecCCCCCCCChhHHHHHHHHHHhhCCCcEEEE--Ec---C-CCcCcHHHHHH
Q psy2895 88 LDIEEPKKIAYTINKLKL---NYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIKIEI--LI---P-DFRNQINHVLK 158 (293)
Q Consensus 88 ~~~eei~~~~~~~~~~G~---~~i~l~gg~~~~l~~~~~~~~~~ll~~i~~~~~~~~i~~--~~---~-~~~~~~~e~l~ 158 (293)
.+.++..+.++.+..... .++++. || + .++..+.+.++ .++.+-. +. + -+..+ =...
T Consensus 18 ~~~~~~~~l~~~l~~~~~~~~~ev~v~---Pp-~-----~~L~~v~~~~~---~~i~vgAQn~~~~~~GA~TGE--iS~~ 83 (255)
T 3qst_A 18 KTVQEAEKLVEMLNGAKVEGNVEVVVA---AP-F-----VFLPTLQQKLR---KDWKVSAENVFTKPNGAFTGE--VTVP 83 (255)
T ss_dssp SSHHHHHHHHHHHHTCCCCSSCEEEEE---CC-G-----GGHHHHHHHSC---TTSEEEESCCCSSSSSSCTTC--CCHH
T ss_pred CCHHHHHHHHHHHHhhcccCCceEEEe---CC-H-----HHHHHHHHHhc---cCCeEEecccCCCCCCCccCc--cCHH
Confidence 467778888777765311 245543 32 2 23433333332 1334433 11 1 12221 1356
Q ss_pred HHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHH
Q psy2895 159 IFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEIL 223 (293)
Q Consensus 159 ~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~ 223 (293)
.|+++|++.+-+|. ||+-. +. +-+-+.+-+.++.+.++ |+.+ |+-.|||.++.+
T Consensus 84 mL~d~G~~~ViiGH--SERR~--~f-~Etd~~v~~Kv~~Al~~--GL~p----IlCvGEtleere 137 (255)
T 3qst_A 84 MIKSFGIEWTILGH--SERRD--IL-KEDDEFLAAKAKFALEN--GMKI----IYCCGEHLSERE 137 (255)
T ss_dssp HHHTTTCCEEEESC--HHHHH--TS-CCCHHHHHHHHHHHHHT--TCEE----EEEECCCHHHHH
T ss_pred HHHHcCCCEEEECc--hhhhh--hc-CCCHHHHHHHHHHHHHC--CCeE----EEEcCCcHHHHH
Confidence 77889999998874 43221 22 34667777788999999 8854 566699988764
No 500
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=40.59 E-value=1.1e+02 Score=25.45 Aligned_cols=56 Identities=18% Similarity=0.016 Sum_probs=40.2
Q ss_pred HHHHHHcCCCeeeeccccchHHHhhcCCCCCHHHHHHHHHHHHHhCCCceeeEeEEeecCCCHHHHH
Q psy2895 157 LKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEIL 223 (293)
Q Consensus 157 l~~l~~aG~~~i~~~less~~~~~~i~~~~~~e~~l~~i~~~~~~~pgi~~~~~~ivG~gEt~ed~~ 223 (293)
...|+++|++.+-+|. |++-. +. +-+-+.+-+.++.+.++ |+.+ |+-.|||.++.+
T Consensus 80 ~~mL~d~G~~~ViiGH--SERR~--~f-~Etd~~v~~Kv~~Al~~--GL~p----I~CvGEtleere 135 (248)
T 1o5x_A 80 AEIAKDLNIEYVIIGH--FERRK--YF-HETDEDVREKLQASLKN--NLKA----VVCFGESLEQRE 135 (248)
T ss_dssp HHHHHHTTCCEEEECC--HHHHH--HS-CCCHHHHHHHHHHHHHT--TCEE----EEEECCCHHHHH
T ss_pred HHHHHHcCCCEEEeCC--hhhhc--cc-CCCHHHHHHHHHHHHHC--CCEE----EEEcCCcHHHHh
Confidence 5677889999988874 43221 12 34677788889999999 8854 566699998873
Done!