Your job contains 1 sequence.
>psy2895
MNLTKDKNIEILKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRG
VATFMIMGSICTRRCKFCNISHGRPDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHD
GGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRLYK
KVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIG
QYLMPSRLHLPVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADKHFF
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2895
(293 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TIGR_CMR|CBU_1266 - symbol:CBU_1266 "lipoic acid syntheta... 878 6.7e-88 1
UNIPROTKB|Q9KTF9 - symbol:lipA "Lipoyl synthase" species:... 866 1.3e-86 1
TIGR_CMR|VC_0943 - symbol:VC_0943 "lipoic acid synthetase... 866 1.3e-86 1
TIGR_CMR|SO_1161 - symbol:SO_1161 "lipoic acid synthetase... 863 2.6e-86 1
UNIPROTKB|P60716 - symbol:lipA species:83333 "Escherichia... 827 1.7e-82 1
TIGR_CMR|CPS_1709 - symbol:CPS_1709 "lipoic acid syntheta... 823 4.5e-82 1
TIGR_CMR|SPO_2102 - symbol:SPO_2102 "lipoic acid syntheta... 769 2.4e-76 1
TIGR_CMR|ECH_0490 - symbol:ECH_0490 "lipoic acid syntheta... 764 8.1e-76 1
TIGR_CMR|APH_0367 - symbol:APH_0367 "lipoic acid syntheta... 709 5.5e-70 1
TIGR_CMR|BA_5205 - symbol:BA_5205 "lipoic acid synthetase... 683 3.1e-67 1
TIGR_CMR|NSE_0322 - symbol:NSE_0322 "lipoic acid syntheta... 683 3.1e-67 1
UNIPROTKB|O32129 - symbol:lipA "Lipoyl synthase" species:... 678 1.1e-66 1
UNIPROTKB|F1NEN8 - symbol:LIAS "Uncharacterized protein" ... 669 9.4e-66 1
UNIPROTKB|E2R257 - symbol:LIAS "Lipoyl synthase, mitochon... 665 2.5e-65 1
POMBASE|SPBC8D2.15 - symbol:lip5 "mitochondrial lipoic ac... 664 3.2e-65 1
UNIPROTKB|Q5BIP7 - symbol:LIAS "Lipoyl synthase, mitochon... 663 4.1e-65 1
UNIPROTKB|O43766 - symbol:LIAS "Lipoyl synthase, mitochon... 663 4.1e-65 1
UNIPROTKB|I3LGA8 - symbol:LIAS "Lipoyl synthase, mitochon... 662 5.2e-65 1
GENEDB_PFALCIPARUM|MAL13P1.220 - symbol:MAL13P1.220 "lipo... 647 2.0e-63 1
UNIPROTKB|Q8IDQ0 - symbol:lipA "Lipoyl synthase, apicopla... 647 2.0e-63 1
RGD|1307270 - symbol:Lias "lipoic acid synthetase" specie... 641 8.8e-63 1
MGI|MGI:1934604 - symbol:Lias "lipoic acid synthetase" sp... 640 1.1e-62 1
ZFIN|ZDB-GENE-040426-1528 - symbol:lias "lipoic acid synt... 637 2.3e-62 1
TIGR_CMR|GSU_0380 - symbol:GSU_0380 "lipoic acid syntheta... 626 3.4e-61 1
UNIPROTKB|P65283 - symbol:lipA "Lipoyl synthase" species:... 611 1.3e-59 1
TAIR|locus:505006586 - symbol:AT5G08415 species:3702 "Ara... 601 1.5e-58 1
FB|FBgn0029158 - symbol:Las "Lipoic acid synthase" specie... 595 6.6e-58 1
TAIR|locus:2051384 - symbol:LIP1 "lipoic acid synthase 1"... 581 2.0e-56 1
ASPGD|ASPL0000071079 - symbol:AN9486 species:162425 "Emer... 567 6.1e-55 1
WB|WBGene00010809 - symbol:M01F1.3 species:6239 "Caenorha... 557 7.0e-54 1
SGD|S000005722 - symbol:LIP5 "Protein involved in biosynt... 556 8.9e-54 1
CGD|CAL0004271 - symbol:LAB5 species:5476 "Candida albica... 538 7.2e-52 1
UNIPROTKB|Q2KIH9 - symbol:LIAS "Lipoyl synthase, mitochon... 524 2.2e-50 1
UNIPROTKB|E1C146 - symbol:E1C146 "Uncharacterized protein... 376 1.1e-34 1
UNIPROTKB|D6RCP8 - symbol:LIAS "Lipoyl synthase, mitochon... 344 2.6e-31 1
UNIPROTKB|C9JCF6 - symbol:LIAS "Lipoyl synthase, mitochon... 333 3.8e-30 1
UNIPROTKB|Q3AET2 - symbol:CHY_0494 "Radical SAM domain pr... 117 0.00019 1
TIGR_CMR|CHY_0494 - symbol:CHY_0494 "radical SAM domain p... 117 0.00019 1
CGD|CAL0002565 - symbol:BIO2 species:5476 "Candida albica... 113 0.00072 1
UNIPROTKB|Q5A974 - symbol:BIO2 "Putative uncharacterized ... 113 0.00072 1
>TIGR_CMR|CBU_1266 [details] [associations]
symbol:CBU_1266 "lipoic acid synthetase" species:227377
"Coxiella burnetii RSA 493" [GO:0009107 "lipoate biosynthetic
process" evidence=ISS] HAMAP:MF_00206 InterPro:IPR003698
InterPro:IPR006638 InterPro:IPR007197 InterPro:IPR013785
Pfam:PF04055 PIRSF:PIRSF005963 SMART:SM00729 PANTHER:PTHR10949
GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0046872 GO:GO:0051539
EMBL:AE016828 GenomeReviews:AE016828_GR eggNOG:COG0320 KO:K03644
UniPathway:UPA00538 GO:GO:0016992 TIGRFAMs:TIGR00510 OMA:DPHEPQR
ProtClustDB:PRK05481 HOGENOM:HOG000235997 RefSeq:NP_820260.1
ProteinModelPortal:Q83C63 GeneID:1209171 KEGG:cbu:CBU_1266
PATRIC:17931263 BioCyc:CBUR227377:GJ7S-1251-MONOMER Uniprot:Q83C63
Length = 315
Score = 878 (314.1 bits), Expect = 6.7e-88, P = 6.7e-88
Identities = 159/278 (57%), Positives = 206/278 (74%)
Query: 12 LKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRGVATFMIMGSIC 71
L+KP+WIR++L S ++ K +LR N+LVTVCEEASCPN+ ECFG G ATFMIMG C
Sbjct: 30 LRKPDWIRIRL-STDSKVSQLKKLLRENHLVTVCEEASCPNLNECFGHGTATFMIMGDKC 88
Query: 72 TRRCKFCNISHGRPDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIK 131
TRRC FC++ HGRPDPLD EEP +A T++ + L YVVITSV+RDDL DGG+ H+ CI
Sbjct: 89 TRRCSFCDVGHGRPDPLDPEEPVNLANTVSIMSLRYVVITSVDRDDLRDGGAQHYAQCIN 148
Query: 132 HIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHS 191
+R+ + IK+E+L+PDFR ++ L Q LPDV NHNIET PRLYK+ RPG+DY S
Sbjct: 149 AVREKNPGIKVEVLVPDFRGRMEKALDQLAQGLPDVFNHNIETAPRLYKQARPGADYPWS 208
Query: 192 LNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYLMPSRLHLP 251
L LL+ FKK +P I TKSG+M+GLGE EE+ V+ D+R H +D LT+GQYL P+R H+P
Sbjct: 209 LALLQTFKKRFPGIPTKSGMMLGLGETREEVEMVMRDLRQHEVDRLTLGQYLQPTRYHMP 268
Query: 252 VHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMAD 289
V RY+ P+ F++ ++A KLGF NV G ++RSSY AD
Sbjct: 269 VDRYVTPQEFQELGELAKKLGFSNVASGPLVRSSYHAD 306
>UNIPROTKB|Q9KTF9 [details] [associations]
symbol:lipA "Lipoyl synthase" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0009107 "lipoate
biosynthetic process" evidence=ISS] HAMAP:MF_00206
InterPro:IPR003698 InterPro:IPR006638 InterPro:IPR007197
InterPro:IPR013785 Pfam:PF04055 PIRSF:PIRSF005963 SMART:SM00729
PANTHER:PTHR10949 GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0046872
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0051539 GO:GO:0009107
eggNOG:COG0320 KO:K03644 UniPathway:UPA00538 GO:GO:0016992
TIGRFAMs:TIGR00510 OMA:EEYVTPE ProtClustDB:PRK05481 PIR:B82259
RefSeq:NP_230590.1 ProteinModelPortal:Q9KTF9 DNASU:2614163
GeneID:2614163 KEGG:vch:VC0943 PATRIC:20080990 Uniprot:Q9KTF9
Length = 321
Score = 866 (309.9 bits), Expect = 1.3e-86, P = 1.3e-86
Identities = 155/280 (55%), Positives = 208/280 (74%)
Query: 10 EILKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRGVATFMIMGS 69
E+L+KP W+++KL ++ K +R NNL +VCEEASCPN+ ECF G ATFMI+G+
Sbjct: 33 EVLRKPEWMKIKLPADSQRIQDIKAAMRKNNLHSVCEEASCPNLAECFNHGTATFMILGA 92
Query: 70 ICTRRCKFCNISHGRPDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSC 129
ICTRRC FC+++HGRP+ + EEPKK+A TI+ +KL YVVITSV+RDDL DGG+ HF C
Sbjct: 93 ICTRRCPFCDVAHGRPNAPEAEEPKKLAQTIHDMKLKYVVITSVDRDDLRDGGAQHFADC 152
Query: 130 IKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYK 189
+ IR L+ IKIE L+PDFR ++ L+ K PDV NHN+ET PRLY+KVRPG++YK
Sbjct: 153 NREIRALNPHIKIETLVPDFRGRMEVALEALKDNPPDVFNHNLETAPRLYRKVRPGANYK 212
Query: 190 HSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYLMPSRLH 249
SL LL+ FK+ +P++ TKSG+M+GLGE EEI+ V+ D+R H + +LT+GQYL PSR H
Sbjct: 213 WSLELLRQFKEQHPHVPTKSGLMMGLGETKEEIVEVLKDLRAHGVTMLTLGQYLAPSRHH 272
Query: 250 LPVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMAD 289
LPV RY+ P F++ K++A +LGF + G +RSSY AD
Sbjct: 273 LPVERYVPPAEFDELKEVALELGFTHAACGPFVRSSYHAD 312
>TIGR_CMR|VC_0943 [details] [associations]
symbol:VC_0943 "lipoic acid synthetase" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0009107 "lipoate biosynthetic
process" evidence=ISS] HAMAP:MF_00206 InterPro:IPR003698
InterPro:IPR006638 InterPro:IPR007197 InterPro:IPR013785
Pfam:PF04055 PIRSF:PIRSF005963 SMART:SM00729 PANTHER:PTHR10949
GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0046872 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0051539 GO:GO:0009107
eggNOG:COG0320 KO:K03644 UniPathway:UPA00538 GO:GO:0016992
TIGRFAMs:TIGR00510 OMA:EEYVTPE ProtClustDB:PRK05481 PIR:B82259
RefSeq:NP_230590.1 ProteinModelPortal:Q9KTF9 DNASU:2614163
GeneID:2614163 KEGG:vch:VC0943 PATRIC:20080990 Uniprot:Q9KTF9
Length = 321
Score = 866 (309.9 bits), Expect = 1.3e-86, P = 1.3e-86
Identities = 155/280 (55%), Positives = 208/280 (74%)
Query: 10 EILKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRGVATFMIMGS 69
E+L+KP W+++KL ++ K +R NNL +VCEEASCPN+ ECF G ATFMI+G+
Sbjct: 33 EVLRKPEWMKIKLPADSQRIQDIKAAMRKNNLHSVCEEASCPNLAECFNHGTATFMILGA 92
Query: 70 ICTRRCKFCNISHGRPDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSC 129
ICTRRC FC+++HGRP+ + EEPKK+A TI+ +KL YVVITSV+RDDL DGG+ HF C
Sbjct: 93 ICTRRCPFCDVAHGRPNAPEAEEPKKLAQTIHDMKLKYVVITSVDRDDLRDGGAQHFADC 152
Query: 130 IKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYK 189
+ IR L+ IKIE L+PDFR ++ L+ K PDV NHN+ET PRLY+KVRPG++YK
Sbjct: 153 NREIRALNPHIKIETLVPDFRGRMEVALEALKDNPPDVFNHNLETAPRLYRKVRPGANYK 212
Query: 190 HSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYLMPSRLH 249
SL LL+ FK+ +P++ TKSG+M+GLGE EEI+ V+ D+R H + +LT+GQYL PSR H
Sbjct: 213 WSLELLRQFKEQHPHVPTKSGLMMGLGETKEEIVEVLKDLRAHGVTMLTLGQYLAPSRHH 272
Query: 250 LPVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMAD 289
LPV RY+ P F++ K++A +LGF + G +RSSY AD
Sbjct: 273 LPVERYVPPAEFDELKEVALELGFTHAACGPFVRSSYHAD 312
>TIGR_CMR|SO_1161 [details] [associations]
symbol:SO_1161 "lipoic acid synthetase" species:211586
"Shewanella oneidensis MR-1" [GO:0009107 "lipoate biosynthetic
process" evidence=ISS] HAMAP:MF_00206 InterPro:IPR003698
InterPro:IPR006638 InterPro:IPR007197 InterPro:IPR013785
Pfam:PF04055 PIRSF:PIRSF005963 SMART:SM00729 PANTHER:PTHR10949
GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0046872 GO:GO:0051539
EMBL:AE014299 GenomeReviews:AE014299_GR eggNOG:COG0320 KO:K03644
UniPathway:UPA00538 GO:GO:0016992 TIGRFAMs:TIGR00510 OMA:DPHEPQR
ProtClustDB:PRK05481 HOGENOM:HOG000235997 RefSeq:NP_716786.1
ProteinModelPortal:Q8EHQ6 GeneID:1168990 KEGG:son:SO_1161
PATRIC:23521962 Uniprot:Q8EHQ6
Length = 321
Score = 863 (308.9 bits), Expect = 2.6e-86, P = 2.6e-86
Identities = 156/279 (55%), Positives = 208/279 (74%)
Query: 11 ILKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRGVATFMIMGSI 70
+L+KP+W+RVKL ++ K LRAN L +VCEEASCPN+ ECF G ATFMI+G+I
Sbjct: 34 MLRKPDWLRVKLPASNQRILDIKQALRANGLHSVCEEASCPNLAECFNHGTATFMILGAI 93
Query: 71 CTRRCKFCNISHGRPDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCI 130
CTRRC FC+++HGRP D +EP K+A TI +KL YVVITSV+RDDL DGG+ HF CI
Sbjct: 94 CTRRCPFCDVAHGRPLKPDEQEPVKLAQTIRDMKLKYVVITSVDRDDLRDGGAQHFADCI 153
Query: 131 KHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKH 190
+ IRKL+ +IKIEIL+PDFR +I+ L I PDV NHN+ET P Y+K RPG++Y+
Sbjct: 154 REIRKLNPEIKIEILVPDFRGRIDAALDILSTEPPDVFNHNLETAPMHYRKARPGANYQW 213
Query: 191 SLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYLMPSRLHL 250
SL+LLK FK+ +PN+ TKSG+M+GLGE ++EI V+ D+R H +++LT+GQYL PS+ HL
Sbjct: 214 SLDLLKRFKERHPNVPTKSGLMMGLGETNDEIAQVLRDLREHKVEMLTLGQYLQPSKFHL 273
Query: 251 PVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMAD 289
PV RY+ P F++ K +A +LGF + G ++RSSY AD
Sbjct: 274 PVERYVSPAEFDELKALADELGFTHAACGPLVRSSYHAD 312
>UNIPROTKB|P60716 [details] [associations]
symbol:lipA species:83333 "Escherichia coli K-12"
[GO:0016992 "lipoate synthase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA;IDA] [GO:0009249 "protein
lipoylation" evidence=IDA] [GO:0009107 "lipoate biosynthetic
process" evidence=IEA;IMP] [GO:0046872 "metal ion binding"
evidence=IEA] HAMAP:MF_00206 InterPro:IPR003698 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF005963 SMART:SM00729 PANTHER:PTHR10949 GO:GO:0005737
Gene3D:3.20.20.70 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
GO:GO:0051539 GO:GO:0009249 EMBL:U82598 EchoBASE:EB1283 EMBL:L07636
eggNOG:COG0320 KO:K03644 UniPathway:UPA00538 GO:GO:0016992
TIGRFAMs:TIGR00510 OMA:EEYVTPE ProtClustDB:PRK05481
HOGENOM:HOG000235997 EMBL:M82805 PIR:B64797 RefSeq:NP_415161.1
RefSeq:YP_488919.1 ProteinModelPortal:P60716 DIP:DIP-48008N
IntAct:P60716 MINT:MINT-1310776 PaxDb:P60716 PRIDE:P60716
EnsemblBacteria:EBESCT00000002407 EnsemblBacteria:EBESCT00000017386
GeneID:12931644 GeneID:945227 KEGG:ecj:Y75_p0618 KEGG:eco:b0628
PATRIC:32116437 EcoGene:EG11306 BioCyc:EcoCyc:EG11306-MONOMER
BioCyc:ECOL316407:JW0623-MONOMER BioCyc:MetaCyc:EG11306-MONOMER
Genevestigator:P60716 Uniprot:P60716
Length = 321
Score = 827 (296.2 bits), Expect = 1.7e-82, P = 1.7e-82
Identities = 151/279 (54%), Positives = 198/279 (70%)
Query: 11 ILKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRGVATFMIMGSI 70
+L+KP W+++KL ++ K +R N L +VCEEASCPN+ ECF G ATFMI+G+I
Sbjct: 34 LLRKPEWMKIKLPADSTRIQGIKAAMRKNGLHSVCEEASCPNLAECFNHGTATFMILGAI 93
Query: 71 CTRRCKFCNISHGRPDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCI 130
CTRRC FC+++HGRP D EP K+A TI + L YVVITSV+RDDL DGG+ HF CI
Sbjct: 94 CTRRCPFCDVAHGRPVAPDANEPVKLAQTIADMALRYVVITSVDRDDLRDGGAQHFADCI 153
Query: 131 KHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKH 190
IR+ S +IKIE L+PDFR +++ L I PDV NHN+E VPR+Y++VRPG+DY
Sbjct: 154 TAIREKSPQIKIETLVPDFRGRMDRALDILTATPPDVFNHNLENVPRIYRQVRPGADYNW 213
Query: 191 SLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYLMPSRLHL 250
SL LL+ FK+ +P I TKSG+MVGLGE +EEI+ V+ D+R H + +LT+GQYL PSR HL
Sbjct: 214 SLKLLERFKEAHPEIPTKSGLMVGLGETNEEIIEVMRDLRRHGVTMLTLGQYLQPSRHHL 273
Query: 251 PVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMAD 289
PV RY+ P F++ K A +GF + G +RSSY AD
Sbjct: 274 PVQRYVSPDEFDEMKAEALAMGFTHAACGPFVRSSYHAD 312
>TIGR_CMR|CPS_1709 [details] [associations]
symbol:CPS_1709 "lipoic acid synthetase" species:167879
"Colwellia psychrerythraea 34H" [GO:0009107 "lipoate biosynthetic
process" evidence=ISS] HAMAP:MF_00206 InterPro:IPR003698
InterPro:IPR006638 InterPro:IPR007197 InterPro:IPR013785
Pfam:PF04055 PIRSF:PIRSF005963 SMART:SM00729 PANTHER:PTHR10949
GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0046872 GO:GO:0051539
EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0320 KO:K03644
UniPathway:UPA00538 GO:GO:0016992 TIGRFAMs:TIGR00510 OMA:DPHEPQR
ProtClustDB:PRK05481 RefSeq:YP_268447.1 ProteinModelPortal:Q484R8
STRING:Q484R8 GeneID:3522737 KEGG:cps:CPS_1709 PATRIC:21466589
HOGENOM:HOG000235997 BioCyc:CPSY167879:GI48-1786-MONOMER
Uniprot:Q484R8
Length = 328
Score = 823 (294.8 bits), Expect = 4.5e-82, P = 4.5e-82
Identities = 148/280 (52%), Positives = 204/280 (72%)
Query: 11 ILKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRGVATFMIMGSI 70
+L+KP+W+R+KL + + + K LR N+L +VCEEASCPN+ ECF G ATFMI+G I
Sbjct: 41 MLRKPSWLRIKLPKSSERIDNIKANLRKNDLHSVCEEASCPNLSECFNHGTATFMILGDI 100
Query: 71 CTRRCKFCNISHGRPDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCI 130
CTRRC FC++ HGRP +EPKK+A ++ + L YVVITSV+RDDL DGG+ F C+
Sbjct: 101 CTRRCPFCDVGHGRPLAPKSDEPKKLANSLKDMGLKYVVITSVDRDDLRDGGAQQFADCV 160
Query: 131 KHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKH 190
K I + + K+EIL+PDFR +++ L+I Q P V NHN+ET PRLY KVRPG++Y+
Sbjct: 161 KEIGEQAPNTKVEILVPDFRGRMDRALEILNQNPPHVFNHNMETAPRLYTKVRPGANYQW 220
Query: 191 SLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYLMPSRLHL 250
SL+LLK F + P++ TKSG+MVGLGE +EEIL V+ D+R+H + +LT+GQYL PS+ HL
Sbjct: 221 SLDLLKRFGEANPDVTTKSGLMVGLGETNEEILEVMQDLRDHGVTMLTVGQYLQPSKDHL 280
Query: 251 PVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADK 290
V RY+HP F F++ A K+G+++ G ++RSSY ADK
Sbjct: 281 AVERYVHPDDFAMFEREAKKMGYEHAACGPLVRSSYHADK 320
>TIGR_CMR|SPO_2102 [details] [associations]
symbol:SPO_2102 "lipoic acid synthetase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0009107 "lipoate biosynthetic
process" evidence=ISS] HAMAP:MF_00206 InterPro:IPR003698
InterPro:IPR006638 InterPro:IPR007197 InterPro:IPR013785
Pfam:PF04055 PIRSF:PIRSF005963 SMART:SM00729 PANTHER:PTHR10949
GO:GO:0005737 Gene3D:3.20.20.70 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0051539 GO:GO:0009249
KO:K03644 UniPathway:UPA00538 GO:GO:0016992 TIGRFAMs:TIGR00510
OMA:EEYVTPE ProtClustDB:PRK05481 HOGENOM:HOG000235997
RefSeq:YP_167332.1 ProteinModelPortal:Q5LRM3 GeneID:3193172
KEGG:sil:SPO2102 PATRIC:23377545 Uniprot:Q5LRM3
Length = 316
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 153/280 (54%), Positives = 190/280 (67%)
Query: 13 KKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRGVATFMIMGSICT 72
KKP+WIRVK + T+ I+R NNLVTVCEEA CPN+GEC+ +G AT MIMG ICT
Sbjct: 24 KKPDWIRVKAPGG-KGYADTRRIMRDNNLVTVCEEAGCPNVGECWSQGHATMMIMGEICT 82
Query: 73 RRCKFCNISHGRPDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKH 132
R C FCNI+ GRPD LD EP ++A+ + KL LN+VVITSV+RDDL DGG+ HF I+
Sbjct: 83 RGCTFCNIATGRPDALDAFEPGRVAHAVEKLGLNHVVITSVDRDDLADGGAEHFAQTIRA 142
Query: 133 IRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSL 192
IR S IEIL PDF VL++ + PDV NHN+ETVP LY +VRPG+ Y HSL
Sbjct: 143 IRHRSPSTTIEILTPDFLKCAPEVLEVVVASKPDVFNHNLETVPGLYPEVRPGARYFHSL 202
Query: 193 NLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYLMPSRLHLPV 252
LL+ K+L P+I TKSGIMVGLGE ++++ V+ DMR +ID LTIGQYL P+ H V
Sbjct: 203 RLLQRVKELDPSIFTKSGIMVGLGETEQQVRQVMDDMRAADIDFLTIGQYLQPTPKHHRV 262
Query: 253 HRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADKHF 292
R++HP F ++K AY GF V + RSSY A F
Sbjct: 263 DRFVHPDEFASYEKAAYGKGFLMVSATPLTRSSYHAGDDF 302
>TIGR_CMR|ECH_0490 [details] [associations]
symbol:ECH_0490 "lipoic acid synthetase" species:205920
"Ehrlichia chaffeensis str. Arkansas" [GO:0009107 "lipoate
biosynthetic process" evidence=ISS] HAMAP:MF_00206
InterPro:IPR003698 InterPro:IPR006638 InterPro:IPR007197
InterPro:IPR013785 Pfam:PF04055 PIRSF:PIRSF005963 SMART:SM00729
PANTHER:PTHR10949 GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0046872
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0051539
eggNOG:COG0320 HOGENOM:HOG000235998 KO:K03644 UniPathway:UPA00538
GO:GO:0016992 TIGRFAMs:TIGR00510 OMA:EEYVTPE ProtClustDB:PRK05481
RefSeq:YP_507306.1 ProteinModelPortal:Q2GGX7 STRING:Q2GGX7
GeneID:3927088 KEGG:ech:ECH_0490 PATRIC:20576452
BioCyc:ECHA205920:GJNR-492-MONOMER Uniprot:Q2GGX7
Length = 297
Score = 764 (274.0 bits), Expect = 8.1e-76, P = 8.1e-76
Identities = 147/279 (52%), Positives = 192/279 (68%)
Query: 14 KPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRGVATFMIMGSICTR 73
KP+W++VK+ + D F + +N+++ L TVCEEA+CPNIGEC+ + AT MI+GS CTR
Sbjct: 4 KPDWLKVKMPTG-DTFYQVRNLMKLYKLNTVCEEAACPNIGECWNKRHATVMILGSTCTR 62
Query: 74 RCKFCNISHGRPDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHI 133
C FCN+ G PD LD EP+ +A + LKL +VVITSV+RDDL DGGS HFV CI+ I
Sbjct: 63 ACAFCNVVSGIPDKLDPHEPQNLAKAVGLLKLEHVVITSVDRDDLEDGGSGHFVECIEEI 122
Query: 134 RKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLN 193
RK + IE+L PDF N+ + K+ A PDV NHNIETVPRLY K+RP + Y HSL
Sbjct: 123 RKNDQNVTIEVLTPDFLNKHGAIEKV-ADAAPDVYNHNIETVPRLYAKIRPKARYFHSLY 181
Query: 194 LLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYLMPSRLHLPVH 253
LLK K P + TKSGIMVGLGE EEI V++D+R+ ++D +TIGQYL P+ H V
Sbjct: 182 LLKTVKYKNPKVFTKSGIMVGLGETKEEIYQVMNDLRSADVDFITIGQYLQPTPKHAAVD 241
Query: 254 RYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADKHF 292
RY+ P+ F+ +K +AY GF V G ++RSSY A + F
Sbjct: 242 RYVTPEEFDHYKYVAYSKGFLMVASGPLVRSSYHAGEDF 280
>TIGR_CMR|APH_0367 [details] [associations]
symbol:APH_0367 "lipoic acid synthetase" species:212042
"Anaplasma phagocytophilum HZ" [GO:0009107 "lipoate biosynthetic
process" evidence=ISS] HAMAP:MF_00206 InterPro:IPR003698
InterPro:IPR006638 InterPro:IPR007197 InterPro:IPR013785
Pfam:PF04055 PIRSF:PIRSF005963 SMART:SM00729 PANTHER:PTHR10949
GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0046872 GO:GO:0051539
EMBL:CP000235 GenomeReviews:CP000235_GR eggNOG:COG0320
HOGENOM:HOG000235998 KO:K03644 UniPathway:UPA00538 GO:GO:0016992
TIGRFAMs:TIGR00510 RefSeq:YP_504974.1 ProteinModelPortal:Q2GKX7
STRING:Q2GKX7 GeneID:3931160 KEGG:aph:APH_0367 PATRIC:20949340
OMA:DPHEPQR ProtClustDB:PRK05481 BioCyc:APHA212042:GHPM-396-MONOMER
Uniprot:Q2GKX7
Length = 295
Score = 709 (254.6 bits), Expect = 5.5e-70, P = 5.5e-70
Identities = 134/279 (48%), Positives = 188/279 (67%)
Query: 14 KPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRGVATFMIMGSICTR 73
KP+W+RVK+ + F + +++++ L TVCEEA+CPNIGEC+ + AT M+MG +CTR
Sbjct: 4 KPSWLRVKMPGG-EVFEEVRDLVKRQRLNTVCEEAACPNIGECWNKRHATIMVMGDVCTR 62
Query: 74 RCKFCNISHGRPDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHI 133
C FCN+ G P LD+ EP+++ I+KL L +VVITSV+RDDL DGG+SHF CI+ I
Sbjct: 63 ACAFCNVKTGVPRALDLGEPERVGEAISKLGLKHVVITSVDRDDLPDGGASHFAKCIREI 122
Query: 134 RKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHSLN 193
RK + IEIL PDF+ + V + A PDV NHN+ETVPRLY +VRP + Y +SL
Sbjct: 123 RKRDPNVTIEILTPDFQGKPGAV-DVIASARPDVYNHNLETVPRLYARVRPRAKYFNSLQ 181
Query: 194 LLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYLMPSRLHLPVH 253
LL+ K + TKSG+M+GLGE EE+ V+ D+R +D L +GQYL P++ ++ V
Sbjct: 182 LLQQVKDKTQGVFTKSGLMLGLGEQKEEVYQVMDDLRCAGVDFLVLGQYLQPTKDNIDVD 241
Query: 254 RYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADKHF 292
RY+ P+ FE++K++AY GF V + RSSY A+ F
Sbjct: 242 RYVTPEEFEQYKRMAYAKGFSMVASSPLARSSYHAEDDF 280
>TIGR_CMR|BA_5205 [details] [associations]
symbol:BA_5205 "lipoic acid synthetase" species:198094
"Bacillus anthracis str. Ames" [GO:0009107 "lipoate biosynthetic
process" evidence=ISS] HAMAP:MF_00206 InterPro:IPR003698
InterPro:IPR006638 InterPro:IPR007197 InterPro:IPR013785
Pfam:PF04055 PIRSF:PIRSF005963 SMART:SM00729 PANTHER:PTHR10949
GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0046872 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0051539
eggNOG:COG0320 HOGENOM:HOG000235998 KO:K03644 GO:GO:0016992
TIGRFAMs:TIGR00510 OMA:DPHEPQR ProtClustDB:PRK05481
RefSeq:NP_847388.1 RefSeq:YP_021861.1 RefSeq:YP_031083.1
ProteinModelPortal:Q81XM8 DNASU:1084615
EnsemblBacteria:EBBACT00000009495 EnsemblBacteria:EBBACT00000018788
EnsemblBacteria:EBBACT00000021754 GeneID:1084615 GeneID:2815076
GeneID:2852383 KEGG:ban:BA_5205 KEGG:bar:GBAA_5205 KEGG:bat:BAS4840
BioCyc:BANT260799:GJAJ-4918-MONOMER
BioCyc:BANT261594:GJ7F-5080-MONOMER Uniprot:Q81XM8
Length = 298
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 131/285 (45%), Positives = 191/285 (67%)
Query: 7 KNIEILKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFG-RGVATFM 65
K E +KP W+++KL +N +N+ K ++R+ NL TVCEEA CPNI EC+ R ATFM
Sbjct: 3 KQTEYKRKPEWLKIKLNTN-ENYTGLKKMMRSKNLHTVCEEAKCPNIHECWAVRKTATFM 61
Query: 66 IMGSICTRRCKFCNISHGRPDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSH 125
I+G++CTR C+FC + G P LD++EP+++A ++ ++ L +VVIT+V RDDL DGG++
Sbjct: 62 ILGAVCTRACRFCAVKTGLPTELDLQEPERVADSVVQMGLKHVVITAVARDDLKDGGAAV 121
Query: 126 FVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPG 185
F ++ +R+ + IE+L P + LK+ A PD+LNHNIETV RL +VR
Sbjct: 122 FAETVRAVRRKNPFTSIEVL-PSDMGGVEENLKMLMDAKPDILNHNIETVRRLSNRVRAR 180
Query: 186 SDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYLMP 245
+ Y SL L+ K++ P+I TKS IMVGLGE E+++ + D+R +N+DILT+GQYL P
Sbjct: 181 AKYDRSLEFLRRAKEMQPDIPTKSSIMVGLGETREDLIEAMDDLRANNVDILTLGQYLQP 240
Query: 246 SRLHLPVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADK 290
S+ HLPV +Y P F + K+IA GF + G ++RSSY AD+
Sbjct: 241 SKKHLPVLKYYPPAEFAELKEIALSKGFSHCEAGPLVRSSYHADE 285
>TIGR_CMR|NSE_0322 [details] [associations]
symbol:NSE_0322 "lipoic acid synthetase" species:222891
"Neorickettsia sennetsu str. Miyayama" [GO:0009107 "lipoate
biosynthetic process" evidence=ISS] HAMAP:MF_00206
InterPro:IPR003698 InterPro:IPR006638 InterPro:IPR007197
InterPro:IPR013785 Pfam:PF04055 PIRSF:PIRSF005963 SMART:SM00729
PANTHER:PTHR10949 GO:GO:0005737 Gene3D:3.20.20.70 GO:GO:0046872
GO:GO:0051539 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0320 KO:K03644 UniPathway:UPA00538 GO:GO:0016992
TIGRFAMs:TIGR00510 OMA:EEYVTPE ProtClustDB:PRK05481
HOGENOM:HOG000235997 RefSeq:YP_506212.1 ProteinModelPortal:Q2GE84
STRING:Q2GE84 GeneID:3931843 KEGG:nse:NSE_0322 PATRIC:22680735
BioCyc:NSEN222891:GHFU-348-MONOMER Uniprot:Q2GE84
Length = 296
Score = 683 (245.5 bits), Expect = 3.1e-67, P = 3.1e-67
Identities = 135/281 (48%), Positives = 188/281 (66%)
Query: 12 LKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRGVATFMIMGSIC 71
++KP R+++ ++ F +T ++ A L TVC+EA+CPNI EC+ T MI+GS+C
Sbjct: 5 IEKP---RIRVSADNRAFLETSRLVSACGLNTVCQEAACPNISECWSSKHVTVMILGSVC 61
Query: 72 TRRCKFCNISHGRPDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIK 131
TR C+FCN++ G+P+ LD EP+K+A + KL L +VVITSV+RDDL DGG+ HF SC++
Sbjct: 62 TRACRFCNVTTGKPELLDPHEPEKLASAVGKLGLRHVVITSVDRDDLDDGGAEHFASCVR 121
Query: 132 HIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKHS 191
IR+ S IE+L PDF ++ I A PDV NHN+ETVPRL+ K+R + Y +S
Sbjct: 122 RIRETSPGTSIEVLTPDFLGKVG-ARDIIIAAAPDVFNHNVETVPRLHPKIRIKARYFNS 180
Query: 192 LNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYLMPSRLHLP 251
L+LL+ K+ P I TKSG+M+GLGE E+L V+ DMR ID LTIGQYL PS+ H+
Sbjct: 181 LSLLEEVKRKDPRIFTKSGLMLGLGEERSEVLQVMDDMRVAGIDFLTIGQYLRPSKKHME 240
Query: 252 VHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADKHF 292
V RY + F+ +K+ AY GF V ++ RSSY AD+ F
Sbjct: 241 VQRYATDEEFQYYKEAAYARGFLMVASSALTRSSYHADEDF 281
>UNIPROTKB|O32129 [details] [associations]
symbol:lipA "Lipoyl synthase" species:224308 "Bacillus
subtilis subsp. subtilis str. 168" [GO:0009107 "lipoate
biosynthetic process" evidence=IGI] [GO:0009249 "protein
lipoylation" evidence=IGI] [GO:0016992 "lipoate synthase activity"
evidence=IGI] HAMAP:MF_00206 InterPro:IPR003698 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF005963 SMART:SM00729 PANTHER:PTHR10949 GO:GO:0005737
Gene3D:3.20.20.70 GO:GO:0046872 GO:GO:0051539 GO:GO:0009249
EMBL:AL009126 GenomeReviews:AL009126_GR eggNOG:COG0320
HOGENOM:HOG000235998 KO:K03644 GO:GO:0016992 TIGRFAMs:TIGR00510
OMA:EEYVTPE ProtClustDB:PRK05481 PIR:D70023 RefSeq:NP_391113.2
ProteinModelPortal:O32129 DNASU:938861
EnsemblBacteria:EBBACT00000000322 GeneID:938861 KEGG:bsu:BSU32330
PATRIC:18978438 GenoList:BSU32330 BioCyc:BSUB:BSU32330-MONOMER
BioCyc:MetaCyc:BSU32330-MONOMER Uniprot:O32129
Length = 298
Score = 678 (243.7 bits), Expect = 1.1e-66, P = 1.1e-66
Identities = 132/285 (46%), Positives = 187/285 (65%)
Query: 7 KNIEILKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFG-RGVATFM 65
K E L+KP W+++KL +N +N+ K ++R NNL TVCEEA CPNI EC+ R ATFM
Sbjct: 3 KKDEHLRKPEWLKIKLNTN-ENYTGLKKLMRENNLHTVCEEAKCPNIHECWAVRRTATFM 61
Query: 66 IMGSICTRRCKFCNISHGRPDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSH 125
I+GS+CTR C+FC + G P LD++EP+++A ++ + L + VIT+V RDD DGG+
Sbjct: 62 ILGSVCTRACRFCAVKTGLPTELDLQEPERVADSVALMNLKHAVITAVARDDQKDGGAGI 121
Query: 126 FVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPG 185
F ++ IR+ S IE+L D ++ LK PD+LNHNIETV RL +VR
Sbjct: 122 FAETVRAIRRKSPFTTIEVLPSDMGGNYDN-LKTLMDTRPDILNHNIETVRRLTPRVRAR 180
Query: 186 SDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYLMP 245
+ Y SL L+ K++ P+I TKS IM+GLGE EEI+ V+ D+ +N+DI+ IGQYL P
Sbjct: 181 ATYDRSLEFLRRAKEMQPDIPTKSSIMIGLGETKEEIIEVMDDLLANNVDIMAIGQYLQP 240
Query: 246 SRLHLPVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADK 290
++ HL V +Y HP F + K+IA + GF + G ++RSSY AD+
Sbjct: 241 TKKHLKVQKYYHPDEFAELKEIAMQKGFSHCEAGPLVRSSYHADE 285
>UNIPROTKB|F1NEN8 [details] [associations]
symbol:LIAS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016992 "lipoate synthase activity" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
HAMAP:MF_00206 InterPro:IPR003698 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF005963 SMART:SM00729 PANTHER:PTHR10949 Gene3D:3.20.20.70
GO:GO:0051539 GO:GO:0016992 TIGRFAMs:TIGR00510
GeneTree:ENSGT00390000006234 OMA:EEYVTPE EMBL:AADN02015886
EMBL:AADN02015887 EMBL:AADN02015888 IPI:IPI00579131
ProteinModelPortal:F1NEN8 Ensembl:ENSGALT00000023136
ArrayExpress:F1NEN8 Uniprot:F1NEN8
Length = 339
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 131/298 (43%), Positives = 194/298 (65%)
Query: 2 NLTKDKNIEILKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRG- 60
NL + K E L+ P W++ ++ N+NK KN LR+ NL TVCEEA CPNIGEC+G G
Sbjct: 32 NLKRQKG-ERLRLPPWLKTEIPMG-KNYNKLKNTLRSLNLHTVCEEARCPNIGECWGGGE 89
Query: 61 ----VATFMIMGSICTRRCKFCNISHGR-PDPLDIEEPKKIAYTINKLKLNYVVITSVNR 115
AT M+MG CTR C+FC++ + P PLD EEP A I + L+YVV+TSV+R
Sbjct: 90 YATATATIMLMGDTCTRGCRFCSVKTAKNPPPLDPEEPYNTAKAIAEWGLDYVVLTSVDR 149
Query: 116 DDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETV 175
DD+ DGG+ HF + H+++ ++KI +E L PDFR +N V K+ L DV HN+ETV
Sbjct: 150 DDMPDGGAEHFAKTVSHLKERNSKIVVECLTPDFRGDLNAVEKVALSGL-DVYAHNVETV 208
Query: 176 PRLYKKVR-PGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNI 234
P L +KVR P ++++ S+ +LK+ K + P +++K+ +M+GLGE DE++L + +R +
Sbjct: 209 PELQRKVRDPRANFEQSVRVLKHAKAVQPRVISKTSLMLGLGETDEQVLATMKLLREAGV 268
Query: 235 DILTIGQYLMPSRLHLPVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADKHF 292
D LT+GQY+ P++ HL V Y+ P+ F+ ++K+ LGF G ++RSSY A + F
Sbjct: 269 DCLTLGQYMQPTKRHLKVEEYVTPEKFKYWEKVGNDLGFHYTASGPLVRSSYKAGEFF 326
>UNIPROTKB|E2R257 [details] [associations]
symbol:LIAS "Lipoyl synthase, mitochondrial" species:9615
"Canis lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0032496 "response to lipopolysaccharide" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0006954 "inflammatory response" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0009249 "protein lipoylation"
evidence=IEA] [GO:0016992 "lipoate synthase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] HAMAP:MF_00206
InterPro:IPR003698 InterPro:IPR006638 InterPro:IPR007197
InterPro:IPR013785 Pfam:PF04055 PIRSF:PIRSF005963 SMART:SM00729
PANTHER:PTHR10949 GO:GO:0005739 GO:GO:0006979 Gene3D:3.20.20.70
GO:GO:0046872 GO:GO:0032496 GO:GO:0006954 GO:GO:0051539
GO:GO:0009249 GO:GO:0001843 KO:K03644 UniPathway:UPA00538
GO:GO:0016992 TIGRFAMs:TIGR00510 CTD:11019
GeneTree:ENSGT00390000006234 OMA:EEYVTPE EMBL:AAEX03002535
RefSeq:XP_536255.1 ProteinModelPortal:E2R257
Ensembl:ENSCAFT00000025369 GeneID:479108 KEGG:cfa:479108
NextBio:20854339 Uniprot:E2R257
Length = 373
Score = 665 (239.2 bits), Expect = 2.5e-65, P = 2.5e-65
Identities = 131/298 (43%), Positives = 193/298 (64%)
Query: 2 NLTKDKNIEILKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRG- 60
NL + K E L+ P W++ ++ N+NK KN LR NL TVCEEA CPNIGEC+G G
Sbjct: 65 NLKRQKG-ERLRLPPWLKTEIPMG-KNYNKLKNTLRNLNLHTVCEEARCPNIGECWGGGE 122
Query: 61 ----VATFMIMGSICTRRCKFCNISHGR-PDPLDIEEPKKIAYTINKLKLNYVVITSVNR 115
AT M+MG CTR C+FC++ R P PLD EP A I + L+YVV+TSV+R
Sbjct: 123 YATATATIMLMGDTCTRGCRFCSVKTARNPPPLDASEPYNTAKAIAEWGLDYVVLTSVDR 182
Query: 116 DDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETV 175
DD+ DGG+ HF + ++++ + KI +E L PDFR + + K+ L DV HNIETV
Sbjct: 183 DDMPDGGAEHFAKTVSYLKERNPKILVECLTPDFRGDLKAIEKVALSGL-DVYAHNIETV 241
Query: 176 PRLYKKVR-PGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNI 234
P L +KVR P +++ SL +LK+ K++ P++++K+ IM+GLGENDE++ + +R ++
Sbjct: 242 PELQRKVRDPRANFSQSLRVLKHAKEVRPDVISKTSIMLGLGENDEQVYATMKALREADV 301
Query: 235 DILTIGQYLMPSRLHLPVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADKHF 292
D LT+GQY+ P++ HL V Y+ P+ F+ ++K+ +LGF G ++RSSY A + F
Sbjct: 302 DCLTLGQYMQPTKRHLKVEEYITPEKFKYWEKVGNELGFHYTASGPLVRSSYKAGEFF 359
>POMBASE|SPBC8D2.15 [details] [associations]
symbol:lip5 "mitochondrial lipoic acid synthetase Lip5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005739
"mitochondrion" evidence=ISO;IDA] [GO:0009107 "lipoate biosynthetic
process" evidence=ISS] [GO:0009249 "protein lipoylation"
evidence=ISO] [GO:0016992 "lipoate synthase activity"
evidence=ISO;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
HAMAP:MF_00206 InterPro:IPR003698 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF005963 SMART:SM00729 PomBase:SPBC8D2.15
PANTHER:PTHR10949 GO:GO:0005739 Gene3D:3.20.20.70 GO:GO:0046872
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0051539 GO:GO:0009249
EMBL:AB004538 EMBL:AB004537 eggNOG:COG0320 HOGENOM:HOG000235998
KO:K03644 UniPathway:UPA00538 GO:GO:0016992 TIGRFAMs:TIGR00510
OMA:EEYVTPE PIR:T40760 RefSeq:NP_595577.1 ProteinModelPortal:O13642
STRING:O13642 EnsemblFungi:SPBC8D2.15.1 GeneID:2541234
KEGG:spo:SPBC8D2.15 OrthoDB:EOG4G1QR3 NextBio:20802346
Uniprot:O13642
Length = 370
Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
Identities = 135/293 (46%), Positives = 192/293 (65%)
Query: 8 NIEILKK-PNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFG-----RGV 61
N I K+ P+W++ K+ NFN+ K+ LR ++L TVCEEA CPNIGEC+G R
Sbjct: 63 NGSIHKRLPSWLKTKVPLGT-NFNRIKHDLRGSHLHTVCEEAKCPNIGECWGGKDKSRAT 121
Query: 62 ATFMIMGSICTRRCKFCNISHGR-PDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHD 120
AT M+MG CTR C+FC++ R P PLD EP+ A I + L Y+V+TSV+RDDL D
Sbjct: 122 ATIMLMGDTCTRGCRFCSVKTSRRPGPLDPNEPENTAEAIKQWNLGYIVLTSVDRDDLTD 181
Query: 121 GGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRLYK 180
G++H I+ I++ + I +E L PDF +++ V + K L DV HN+ETV L
Sbjct: 182 LGANHIAKTIQKIKEKAPHILVEALTPDFSGRMDLVEIVAKSGL-DVFAHNVETVEELTP 240
Query: 181 KVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTI 239
VR + Y+ SL++LK+ KK P+++TK+ IM+GLGE D EILT + D+ HN+D++T
Sbjct: 241 FVRDRRATYRQSLSVLKHVKKTCPHLITKTSIMLGLGETDAEILTTLKDLLEHNVDVVTF 300
Query: 240 GQYLMPSRLHLPVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADKHF 292
GQY+ P++ HL V Y+HPK FE +K++A KLGF V G ++RSSY A ++F
Sbjct: 301 GQYMRPTKRHLKVQEYVHPKKFEYWKEVAEKLGFLYVASGPLVRSSYKAGEYF 353
>UNIPROTKB|Q5BIP7 [details] [associations]
symbol:LIAS "Lipoyl synthase, mitochondrial" species:9913
"Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0032496
"response to lipopolysaccharide" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0001843 "neural tube
closure" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0009249 "protein lipoylation"
evidence=IEA] [GO:0016992 "lipoate synthase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] HAMAP:MF_00206
InterPro:IPR003698 InterPro:IPR006638 InterPro:IPR007197
InterPro:IPR013785 Pfam:PF04055 PIRSF:PIRSF005963 SMART:SM00729
PANTHER:PTHR10949 GO:GO:0005739 GO:GO:0006979 Gene3D:3.20.20.70
GO:GO:0046872 GO:GO:0032496 GO:GO:0006954 GO:GO:0051539
GO:GO:0001843 eggNOG:COG0320 HOGENOM:HOG000235998 KO:K03644
UniPathway:UPA00538 GO:GO:0016992 TIGRFAMs:TIGR00510 EMBL:BT021177
IPI:IPI00718348 RefSeq:NP_001017944.1 UniGene:Bt.9756
ProteinModelPortal:Q5BIP7 STRING:Q5BIP7 Ensembl:ENSBTAT00000019299
GeneID:530865 KEGG:bta:530865 CTD:11019
GeneTree:ENSGT00390000006234 HOVERGEN:HBG023328 InParanoid:Q5BIP7
OMA:EEYVTPE NextBio:20875341 ArrayExpress:Q5BIP7 Uniprot:Q5BIP7
Length = 372
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 130/298 (43%), Positives = 193/298 (64%)
Query: 2 NLTKDKNIEILKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRG- 60
NL + K E L+ P W++ ++ N+NK KN LR NL TVCEEA CPNIGEC+G G
Sbjct: 65 NLKRQKG-ERLRLPPWLKTEIPMG-KNYNKLKNTLRNLNLHTVCEEARCPNIGECWGGGE 122
Query: 61 ----VATFMIMGSICTRRCKFCNISHGR-PDPLDIEEPKKIAYTINKLKLNYVVITSVNR 115
AT M+MG CTR C+FC++ R P PLD EP A I + L+YVV+TSV+R
Sbjct: 123 YATATATIMLMGDTCTRGCRFCSVKTARNPPPLDANEPYNTAKAIAEWGLDYVVLTSVDR 182
Query: 116 DDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETV 175
DD+ DGG+ HF + ++++ + KI +E L PDFR + + K+ L DV HN+ETV
Sbjct: 183 DDMPDGGAEHFAKTVSYLKERNPKILVECLTPDFRGDLKAIEKVALSGL-DVYAHNVETV 241
Query: 176 PRLYKKVR-PGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNI 234
P L +KVR P +++ SL +LK+ K++ P++++K+ IM+GLGENDE++ + +R ++
Sbjct: 242 PELQRKVRDPRANFDQSLRVLKHAKEVRPDVISKTSIMLGLGENDEQVYATMKALREADV 301
Query: 235 DILTIGQYLMPSRLHLPVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADKHF 292
D LT+GQY+ P++ HL V Y+ P+ F+ ++K+ +LGF G ++RSSY A + F
Sbjct: 302 DCLTLGQYMQPTKRHLKVEEYITPEKFKYWEKVGNELGFHYTASGPLVRSSYKAGEFF 359
>UNIPROTKB|O43766 [details] [associations]
symbol:LIAS "Lipoyl synthase, mitochondrial" species:9606
"Homo sapiens" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0009249 "protein lipoylation" evidence=IEA] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] [GO:0001843 "neural
tube closure" evidence=IEA] [GO:0016992 "lipoate synthase activity"
evidence=ISS] [GO:0032496 "response to lipopolysaccharide"
evidence=ISS] [GO:0009107 "lipoate biosynthetic process"
evidence=ISS] [GO:0006979 "response to oxidative stress"
evidence=ISS] [GO:0006954 "inflammatory response" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISS] HAMAP:MF_00206
InterPro:IPR003698 InterPro:IPR006638 InterPro:IPR007197
InterPro:IPR013785 Pfam:PF04055 PIRSF:PIRSF005963 SMART:SM00729
PANTHER:PTHR10949 GO:GO:0005739 GO:GO:0006979 Gene3D:3.20.20.70
GO:GO:0046872 GO:GO:0032496 GO:GO:0006954 GO:GO:0051539
GO:GO:0001843 EMBL:CH471069 eggNOG:COG0320 HOGENOM:HOG000235998
KO:K03644 UniPathway:UPA00538 GO:GO:0016992 TIGRFAMs:TIGR00510
CTD:11019 HOVERGEN:HBG023328 OMA:EEYVTPE OrthoDB:EOG4T1HMX
EMBL:AK292238 EMBL:BC023635 EMBL:AJ224162 IPI:IPI00216886
RefSeq:NP_006850.2 RefSeq:NP_919433.1 UniGene:Hs.550502
ProteinModelPortal:O43766 STRING:O43766 PaxDb:O43766 PRIDE:O43766
DNASU:11019 Ensembl:ENST00000261434 GeneID:11019 KEGG:hsa:11019
UCSC:uc003guf.3 GeneCards:GC04P039463 HGNC:HGNC:16429 HPA:HPA018842
HPA:HPA019076 MIM:607031 MIM:614462 neXtProt:NX_O43766
PharmGKB:PA30369 InParanoid:O43766 PhylomeDB:O43766
DrugBank:DB00166 GenomeRNAi:11019 NextBio:41864 ArrayExpress:O43766
Bgee:O43766 CleanEx:HS_LIAS Genevestigator:O43766
GermOnline:ENSG00000121897 Uniprot:O43766
Length = 372
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 131/298 (43%), Positives = 191/298 (64%)
Query: 2 NLTKDKNIEILKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRG- 60
NL + K E L+ P W++ ++ N+NK KN LR NL TVCEEA CPNIGEC+G G
Sbjct: 65 NLKRQKG-ERLRLPPWLKTEIPMG-KNYNKLKNTLRNLNLHTVCEEARCPNIGECWGGGE 122
Query: 61 ----VATFMIMGSICTRRCKFCNISHGR-PDPLDIEEPKKIAYTINKLKLNYVVITSVNR 115
AT M+MG CTR C+FC++ R P PLD EP A I + L+YVV+TSV+R
Sbjct: 123 YATATATIMLMGDTCTRGCRFCSVKTARNPPPLDASEPYNTAKAIAEWGLDYVVLTSVDR 182
Query: 116 DDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETV 175
DD+ DGG+ H + ++++ + KI +E L PDFR + + K+ L DV HN+ETV
Sbjct: 183 DDMPDGGAEHIAKTVSYLKERNPKILVECLTPDFRGDLKAIEKVALSGL-DVYAHNVETV 241
Query: 176 PRLYKKVR-PGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNI 234
P L KVR P +++ SL +LK+ KK+ P++++K+ IM+GLGENDE++ + +R ++
Sbjct: 242 PELQSKVRDPRANFDQSLRVLKHAKKVQPDVISKTSIMLGLGENDEQVYATMKALREADV 301
Query: 235 DILTIGQYLMPSRLHLPVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADKHF 292
D LT+GQY+ P+R HL V Y+ P+ F+ ++K+ +LGF G ++RSSY A + F
Sbjct: 302 DCLTLGQYMQPTRRHLKVEEYITPEKFKYWEKVGNELGFHYTASGPLVRSSYKAGEFF 359
>UNIPROTKB|I3LGA8 [details] [associations]
symbol:LIAS "Lipoyl synthase, mitochondrial" species:9823
"Sus scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0032496
"response to lipopolysaccharide" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=IEA] [GO:0006954
"inflammatory response" evidence=IEA] [GO:0001843 "neural tube
closure" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] [GO:0009249 "protein lipoylation"
evidence=IEA] [GO:0016992 "lipoate synthase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] HAMAP:MF_00206
InterPro:IPR003698 InterPro:IPR006638 InterPro:IPR007197
InterPro:IPR013785 Pfam:PF04055 PIRSF:PIRSF005963 SMART:SM00729
PANTHER:PTHR10949 GO:GO:0005739 GO:GO:0006979 Gene3D:3.20.20.70
GO:GO:0046872 GO:GO:0032496 GO:GO:0006954 GO:GO:0051539
GO:GO:0009249 GO:GO:0001843 KO:K03644 UniPathway:UPA00538
GO:GO:0016992 TIGRFAMs:TIGR00510 CTD:11019
GeneTree:ENSGT00390000006234 OMA:EEYVTPE EMBL:FP312767
RefSeq:NP_001230391.1 UniGene:Ssc.7708 Ensembl:ENSSSCT00000022874
GeneID:100627627 KEGG:ssc:100627627 Uniprot:I3LGA8
Length = 372
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 131/298 (43%), Positives = 192/298 (64%)
Query: 2 NLTKDKNIEILKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRG- 60
NL + K E L+ P W++ ++ N+NK KN LR NL TVCEEA CPNIGEC+G G
Sbjct: 65 NLKRQKG-ERLRLPPWLKTEIPMG-KNYNKLKNTLRNLNLHTVCEEARCPNIGECWGGGE 122
Query: 61 ----VATFMIMGSICTRRCKFCNISHGR-PDPLDIEEPKKIAYTINKLKLNYVVITSVNR 115
AT M+MG CTR C+FC++ R P PLD EP A I + L+YVV+TSV+R
Sbjct: 123 YATATATIMLMGDTCTRGCRFCSVKTARNPPPLDANEPYNTAKAIAEWGLDYVVLTSVDR 182
Query: 116 DDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETV 175
DD+ DGG+ HF + ++++ + KI +E L PDFR + V K+ L DV HN+ETV
Sbjct: 183 DDMPDGGAEHFAKTVSYLKERNPKILVECLTPDFRGDLKAVEKVAVSGL-DVYAHNVETV 241
Query: 176 PRLYKKVR-PGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNI 234
P L +KVR P + + SL +LK+ K++ P++++K+ IM+GLGENDE++ + +R ++
Sbjct: 242 PELQRKVRDPRAGFDQSLRVLKHAKEVRPDVISKTSIMLGLGENDEQVYATMKALREADV 301
Query: 235 DILTIGQYLMPSRLHLPVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADKHF 292
D LT+GQY+ P++ HL V Y+ P+ F+ ++K+ +LGF G ++RSSY A + F
Sbjct: 302 DCLTLGQYMQPTKRHLKVEEYITPEKFKYWEKVGNELGFHYTASGPLVRSSYKAGEFF 359
>GENEDB_PFALCIPARUM|MAL13P1.220 [details] [associations]
symbol:MAL13P1.220 "lipoate synthase,
putative" species:5833 "Plasmodium falciparum" [GO:0005739
"mitochondrion" evidence=ISS] [GO:0020011 "apicoplast"
evidence=ISS] HAMAP:MF_00206 InterPro:IPR003698 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF005963 SMART:SM00729 PANTHER:PTHR10949 GO:GO:0005739
Gene3D:3.20.20.70 GO:GO:0046872 GO:GO:0051539 EMBL:AL844509
GenomeReviews:AL844509_GR GO:GO:0020011 eggNOG:COG0320
HOGENOM:HOG000235998 KO:K03644 UniPathway:UPA00538 GO:GO:0016992
TIGRFAMs:TIGR00510 RefSeq:XP_001350160.1 ProteinModelPortal:Q8IDQ0
EnsemblProtists:MAL13P1.220:mRNA GeneID:813778 KEGG:pfa:MAL13P1.220
EuPathDB:PlasmoDB:PF3D7_1344600 OMA:HAGDDFR ProtClustDB:PTZ00413
Uniprot:Q8IDQ0
Length = 415
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 129/282 (45%), Positives = 183/282 (64%)
Query: 13 KKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRGVATFMIMGSICT 72
KKP+W V + +NK K+ ++ NL TVCEEA CPNIGEC+ G AT M++G CT
Sbjct: 122 KKPDWFHVAA-PTVAKYNKLKDDIKKLNLHTVCEEAQCPNIGECWNIGTATIMLLGDTCT 180
Query: 73 RRCKFCNI-SHGRPDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIK 131
R CKFC+I + P P DI EP A I + ++YVV+TSV+RDDL DGG+SHF ++
Sbjct: 181 RGCKFCSIKTSSNPLPPDINEPFNTAKAICEWNIDYVVLTSVDRDDLPDGGASHFAKTVE 240
Query: 132 HIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPG-SDYKH 190
++ I IE L+ DF+ I+ V K+ L DV HNIETV RL K VR ++Y
Sbjct: 241 LVKFSRPDILIECLVSDFQGNIDSVRKLAFSGL-DVYAHNIETVKRLQKYVRDKRANYDQ 299
Query: 191 SLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYLMPSRLHL 250
SL +LK K++ P + TK+ IM+GLGE EE++ ++D R +NID++T GQYL P++ HL
Sbjct: 300 SLFVLKTAKEINPQLYTKTSIMLGLGETKEEVIQTMYDARKNNIDVITFGQYLRPTKNHL 359
Query: 251 PVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADKHF 292
+ +Y+ P+ FE +K+ K+GFK + G ++RSSY A ++F
Sbjct: 360 SIVQYISPQMFEYYKEEGLKMGFKYIASGPLVRSSYKAGEYF 401
>UNIPROTKB|Q8IDQ0 [details] [associations]
symbol:lipA "Lipoyl synthase, apicoplast" species:36329
"Plasmodium falciparum 3D7" [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0020011 "apicoplast" evidence=ISS] HAMAP:MF_00206
InterPro:IPR003698 InterPro:IPR006638 InterPro:IPR007197
InterPro:IPR013785 Pfam:PF04055 PIRSF:PIRSF005963 SMART:SM00729
PANTHER:PTHR10949 GO:GO:0005739 Gene3D:3.20.20.70 GO:GO:0046872
GO:GO:0051539 EMBL:AL844509 GenomeReviews:AL844509_GR GO:GO:0020011
eggNOG:COG0320 HOGENOM:HOG000235998 KO:K03644 UniPathway:UPA00538
GO:GO:0016992 TIGRFAMs:TIGR00510 RefSeq:XP_001350160.1
ProteinModelPortal:Q8IDQ0 EnsemblProtists:MAL13P1.220:mRNA
GeneID:813778 KEGG:pfa:MAL13P1.220 EuPathDB:PlasmoDB:PF3D7_1344600
OMA:HAGDDFR ProtClustDB:PTZ00413 Uniprot:Q8IDQ0
Length = 415
Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
Identities = 129/282 (45%), Positives = 183/282 (64%)
Query: 13 KKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRGVATFMIMGSICT 72
KKP+W V + +NK K+ ++ NL TVCEEA CPNIGEC+ G AT M++G CT
Sbjct: 122 KKPDWFHVAA-PTVAKYNKLKDDIKKLNLHTVCEEAQCPNIGECWNIGTATIMLLGDTCT 180
Query: 73 RRCKFCNI-SHGRPDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIK 131
R CKFC+I + P P DI EP A I + ++YVV+TSV+RDDL DGG+SHF ++
Sbjct: 181 RGCKFCSIKTSSNPLPPDINEPFNTAKAICEWNIDYVVLTSVDRDDLPDGGASHFAKTVE 240
Query: 132 HIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPG-SDYKH 190
++ I IE L+ DF+ I+ V K+ L DV HNIETV RL K VR ++Y
Sbjct: 241 LVKFSRPDILIECLVSDFQGNIDSVRKLAFSGL-DVYAHNIETVKRLQKYVRDKRANYDQ 299
Query: 191 SLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYLMPSRLHL 250
SL +LK K++ P + TK+ IM+GLGE EE++ ++D R +NID++T GQYL P++ HL
Sbjct: 300 SLFVLKTAKEINPQLYTKTSIMLGLGETKEEVIQTMYDARKNNIDVITFGQYLRPTKNHL 359
Query: 251 PVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADKHF 292
+ +Y+ P+ FE +K+ K+GFK + G ++RSSY A ++F
Sbjct: 360 SIVQYISPQMFEYYKEEGLKMGFKYIASGPLVRSSYKAGEYF 401
>RGD|1307270 [details] [associations]
symbol:Lias "lipoic acid synthetase" species:10116 "Rattus
norvegicus" [GO:0001843 "neural tube closure" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006954 "inflammatory response"
evidence=IEA;ISO] [GO:0006979 "response to oxidative stress"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0009107 "lipoate biosynthetic process" evidence=ISO]
[GO:0009249 "protein lipoylation" evidence=IEA] [GO:0016992
"lipoate synthase activity" evidence=IEA;ISO] [GO:0032496 "response
to lipopolysaccharide" evidence=IEA;ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] HAMAP:MF_00206 InterPro:IPR003698
InterPro:IPR006638 InterPro:IPR007197 InterPro:IPR013785
Pfam:PF04055 PIRSF:PIRSF005963 SMART:SM00729 RGD:1307270
PANTHER:PTHR10949 GO:GO:0005739 GO:GO:0006979 Gene3D:3.20.20.70
GO:GO:0046872 GO:GO:0032496 GO:GO:0006954 GO:GO:0051539
GO:GO:0001843 eggNOG:COG0320 HOGENOM:HOG000235998 KO:K03644
UniPathway:UPA00538 GO:GO:0016992 TIGRFAMs:TIGR00510 CTD:11019
GeneTree:ENSGT00390000006234 HOVERGEN:HBG023328 OMA:EEYVTPE
OrthoDB:EOG4T1HMX EMBL:BC083708 IPI:IPI00364490
RefSeq:NP_001012037.1 UniGene:Rn.25547 ProteinModelPortal:Q5XIH4
STRING:Q5XIH4 PRIDE:Q5XIH4 Ensembl:ENSRNOT00000003779 GeneID:305348
KEGG:rno:305348 InParanoid:Q5XIH4 NextBio:654409
Genevestigator:Q5XIH4 Uniprot:Q5XIH4
Length = 373
Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
Identities = 129/298 (43%), Positives = 190/298 (63%)
Query: 2 NLTKDKNIEILKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRG- 60
NL + K E L+ P W++ K+ N+NK KN LR NL TVCEEA CPNIGEC+G G
Sbjct: 64 NLKRQKG-ERLRLPPWLKTKIPMG-KNYNKLKNTLRNLNLHTVCEEARCPNIGECWGGGE 121
Query: 61 ----VATFMIMGSICTRRCKFCNISHGR-PDPLDIEEPKKIAYTINKLKLNYVVITSVNR 115
AT M+MG CTR C+FC++ R P PLD EP A I + L+YVV+TSV+R
Sbjct: 122 YATATATIMLMGDTCTRGCRFCSVKTARNPPPLDPSEPDNTARAIAEWGLDYVVLTSVDR 181
Query: 116 DDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETV 175
DD+ DGG+ H + +++ + KI +E L PDFR + V K+ L DV HN+ETV
Sbjct: 182 DDVVDGGAEHIAKTVSCLKERNPKILVECLTPDFRGDLRAVEKVALSGL-DVYAHNVETV 240
Query: 176 PRLYKKVR-PGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNI 234
P L +KVR P +++ SL +LK+ K++ P++++K+ IM+GLGE DE++ + +R ++
Sbjct: 241 PELQRKVRDPRANFDQSLRVLKHAKEVQPDVVSKTSIMLGLGETDEQVYATMKALRAADV 300
Query: 235 DILTIGQYLMPSRLHLPVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADKHF 292
D LT+GQY+ P++ HL V Y+ P+ F+ ++++ +LGF G ++RSSY A + F
Sbjct: 301 DCLTLGQYMQPTKRHLKVEEYVTPEKFKYWEEVGNELGFHYTASGPLVRSSYKAGEFF 358
>MGI|MGI:1934604 [details] [associations]
symbol:Lias "lipoic acid synthetase" species:10090 "Mus
musculus" [GO:0001843 "neural tube closure" evidence=IMP]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006954 "inflammatory response"
evidence=IMP] [GO:0006979 "response to oxidative stress"
evidence=IMP] [GO:0009107 "lipoate biosynthetic process"
evidence=IGI] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0016992 "lipoate synthase activity" evidence=IGI] [GO:0032496
"response to lipopolysaccharide" evidence=IMP] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster
binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA] HAMAP:MF_00206 InterPro:IPR003698
InterPro:IPR006638 InterPro:IPR007197 InterPro:IPR013785
Pfam:PF04055 PIRSF:PIRSF005963 SMART:SM00729 MGI:MGI:1934604
PANTHER:PTHR10949 GO:GO:0005739 GO:GO:0006979 Gene3D:3.20.20.70
GO:GO:0046872 GO:GO:0032496 GO:GO:0006954 GO:GO:0051539
GO:GO:0001843 eggNOG:COG0320 HOGENOM:HOG000235998 KO:K03644
UniPathway:UPA00538 GO:GO:0016992 TIGRFAMs:TIGR00510 CTD:11019
GeneTree:ENSGT00390000006234 HOVERGEN:HBG023328 OMA:EEYVTPE
OrthoDB:EOG4T1HMX EMBL:AB057731 EMBL:AK048744 EMBL:AK049548
EMBL:AK077192 EMBL:BC002141 IPI:IPI00117104 RefSeq:NP_077791.1
UniGene:Mm.195776 ProteinModelPortal:Q99M04 SMR:Q99M04
STRING:Q99M04 PaxDb:Q99M04 PRIDE:Q99M04 DNASU:79464
Ensembl:ENSMUST00000031101 GeneID:79464 KEGG:mmu:79464
UCSC:uc008xnq.1 InParanoid:Q99M04 NextBio:349935 Bgee:Q99M04
CleanEx:MM_LIAS Genevestigator:Q99M04 GermOnline:ENSMUSG00000029199
Uniprot:Q99M04
Length = 373
Score = 640 (230.4 bits), Expect = 1.1e-62, P = 1.1e-62
Identities = 128/298 (42%), Positives = 190/298 (63%)
Query: 2 NLTKDKNIEILKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRG- 60
NL + K E L+ P W++ K+ N+NK KN LR +L TVCEEA CPNIGEC+G G
Sbjct: 64 NLKRQKG-ERLRLPPWLKTKIPMG-KNYNKLKNTLRNLSLHTVCEEARCPNIGECWGGGE 121
Query: 61 ----VATFMIMGSICTRRCKFCNISHGR-PDPLDIEEPKKIAYTINKLKLNYVVITSVNR 115
AT M+MG CTR C+FC++ R P PLD EP A I + L+YVV+TSV+R
Sbjct: 122 YATATATIMLMGDTCTRGCRFCSVKTARNPPPLDANEPDNTAKAIAEWGLDYVVLTSVDR 181
Query: 116 DDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETV 175
DD+ DGG+ H + +++ + KI +E L PDFR + V K+ L DV HN+ETV
Sbjct: 182 DDVADGGAEHIAKTVSCLKERNPKILVECLTPDFRGDLRAVEKVALSGL-DVYAHNVETV 240
Query: 176 PRLYKKVR-PGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNI 234
P L +KVR P +++ SL +L++ K++ P++++K+ IM+GLGE DE++ + +R ++
Sbjct: 241 PELQRKVRDPRANFDQSLRVLRHAKEVQPDVVSKTSIMLGLGETDEQVYATLKALRAADV 300
Query: 235 DILTIGQYLMPSRLHLPVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADKHF 292
D LT+GQY+ P++ HL V Y+ P+ F+ ++K+ +LGF G ++RSSY A + F
Sbjct: 301 DCLTLGQYMQPTKRHLKVEEYVTPEKFKYWEKVGNELGFLYTASGPLVRSSYKAGEFF 358
>ZFIN|ZDB-GENE-040426-1528 [details] [associations]
symbol:lias "lipoic acid synthetase" species:7955
"Danio rerio" [GO:0003824 "catalytic activity" evidence=IEA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0016992
"lipoate synthase activity" evidence=IEA] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] [GO:0009107 "lipoate
biosynthetic process" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0009249
"protein lipoylation" evidence=IEA] HAMAP:MF_00206
InterPro:IPR003698 InterPro:IPR006638 InterPro:IPR007197
InterPro:IPR013785 Pfam:PF04055 PIRSF:PIRSF005963 SMART:SM00729
ZFIN:ZDB-GENE-040426-1528 PANTHER:PTHR10949 GO:GO:0005739
Gene3D:3.20.20.70 GO:GO:0046872 GO:GO:0051539 eggNOG:COG0320
HOGENOM:HOG000235998 KO:K03644 UniPathway:UPA00538 GO:GO:0016992
TIGRFAMs:TIGR00510 CTD:11019 GeneTree:ENSGT00390000006234
HOVERGEN:HBG023328 EMBL:BC154781 EMBL:BC056561 IPI:IPI00492038
RefSeq:NP_001103871.1 UniGene:Dr.16722 ProteinModelPortal:Q6PHG4
STRING:Q6PHG4 Ensembl:ENSDART00000036448 GeneID:393528
KEGG:dre:393528 InParanoid:Q6PHG4 OrthoDB:EOG4T1HMX
NextBio:20814551 Bgee:Q6PHG4 Uniprot:Q6PHG4
Length = 399
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 130/298 (43%), Positives = 191/298 (64%)
Query: 2 NLTKDKNIEILKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRG- 60
NL ++K E L+ P W++ ++ N+NK KN LR NL TVCEEA CPNIGEC+G G
Sbjct: 87 NLKREKG-ERLRLPPWLKTEIPIG-KNYNKLKNTLRELNLHTVCEEARCPNIGECWGGGE 144
Query: 61 ----VATFMIMGSICTRRCKFCNISHGR-PDPLDIEEPKKIAYTINKLKLNYVVITSVNR 115
AT M+MG CTR C+FC++ R P PLD +EP A I L+YVV+TSV+R
Sbjct: 145 YATATATIMLMGDTCTRGCRFCSVKTARRPPPLDPDEPYNTAKAIAAWGLDYVVLTSVDR 204
Query: 116 DDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETV 175
DD+ DGG+ HF + +I++ ++KI +E L PDFR + V KI L DV HN+ETV
Sbjct: 205 DDIPDGGAEHFAKTVSNIKERNSKILVECLTPDFRGDLAAVEKIALSGL-DVYAHNVETV 263
Query: 176 PRLYKKVR-PGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNI 234
L + VR P +++ SL++L++ KK+ ++LTK+ IM+GLGE D +I + ++R+ +
Sbjct: 264 RELQRHVRDPRANFDQSLSVLRHAKKVKSSVLTKTSIMLGLGETDAQIQATLTELRDSGV 323
Query: 235 DILTIGQYLMPSRLHLPVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADKHF 292
D LT+GQY+ P++ HL V Y+ P+ F ++K+ ++GF G ++RSSY A + F
Sbjct: 324 DCLTLGQYMQPTKRHLKVEEYVTPEKFAFWEKVGQEMGFIYTASGPLVRSSYKAGEFF 381
>TIGR_CMR|GSU_0380 [details] [associations]
symbol:GSU_0380 "lipoic acid synthetase" species:243231
"Geobacter sulfurreducens PCA" [GO:0009107 "lipoate biosynthetic
process" evidence=ISS] HAMAP:MF_00206 InterPro:IPR003698
InterPro:IPR006638 InterPro:IPR013785 PIRSF:PIRSF005963
SMART:SM00729 PANTHER:PTHR10949 GO:GO:0005737 Gene3D:3.20.20.70
GO:GO:0046872 GO:GO:0051539 EMBL:AE017180 GenomeReviews:AE017180_GR
eggNOG:COG0320 KO:K03644 UniPathway:UPA00538 GO:GO:0016992
TIGRFAMs:TIGR00510 ProtClustDB:PRK05481 HOGENOM:HOG000235997
RefSeq:NP_951439.1 ProteinModelPortal:P61196 GeneID:2686621
KEGG:gsu:GSU0380 PATRIC:22023504 OMA:ARCPNIT
BioCyc:GSUL243231:GH27-405-MONOMER Uniprot:P61196
Length = 303
Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
Identities = 124/280 (44%), Positives = 178/280 (63%)
Query: 9 IEILKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRGVATFMIMG 68
+ I +KP W+R K+ N +L L TVC EA CPNI ECF ATF+I+G
Sbjct: 1 MNIHRKPEWLRKKI--NPAAHGAMDELLGELRLHTVCREARCPNITECFRERQATFLILG 58
Query: 69 SICTRRCKFCNISHGRPDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVS 128
+ CTR C FCN++ G P P D +EP ++A + +L L +VVITS RDDL DGG+ H+V+
Sbjct: 59 AECTRLCSFCNVTKGEPLPPDPDEPARVAQAVVRLSLAHVVITSPTRDDLPDGGAGHYVA 118
Query: 129 CIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDY 188
+ I +++ +E+LIPDF L A P ++ HN+ETVPRLY +R G+DY
Sbjct: 119 TVATIGRVAPATVVELLIPDFLGS-RAALADVVAAAPRIIGHNVETVPRLYA-IRAGADY 176
Query: 189 KHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYLMPSRL 248
SL +L+ ++L P TKSG+M+GLGE +EE+L V+ D+R + L++GQYL PSR
Sbjct: 177 GRSLAVLRTLRELAPGCATKSGLMLGLGETEEEVLAVMADLRRVDCTYLSLGQYLAPSRF 236
Query: 249 HLPVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMA 288
H PV ++ P+ F++ K++A K+GF++V G +RSSY A
Sbjct: 237 HHPVREFVLPETFDRLKELAEKMGFRHVESGPYVRSSYHA 276
>UNIPROTKB|P65283 [details] [associations]
symbol:lipA "Lipoyl synthase" species:1773 "Mycobacterium
tuberculosis" [GO:0040007 "growth" evidence=IMP] HAMAP:MF_00206
InterPro:IPR003698 InterPro:IPR006638 InterPro:IPR007197
InterPro:IPR013785 Pfam:PF04055 PIRSF:PIRSF005963 SMART:SM00729
PANTHER:PTHR10949 GO:GO:0005737 GO:GO:0040007 Gene3D:3.20.20.70
EMBL:AE000516 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
GO:GO:0046872 GO:GO:0051539 EMBL:BX842579 eggNOG:COG0320 KO:K03644
UniPathway:UPA00538 GO:GO:0016992 TIGRFAMs:TIGR00510 OMA:EEYVTPE
ProtClustDB:PRK05481 HOGENOM:HOG000235997 PIR:C70787
RefSeq:NP_216734.1 RefSeq:NP_336746.1 RefSeq:YP_006515638.1
ProteinModelPortal:P65283 PRIDE:P65283
EnsemblBacteria:EBMYCT00000001823 EnsemblBacteria:EBMYCT00000070191
GeneID:13318907 GeneID:887922 GeneID:924151 KEGG:mtc:MT2275
KEGG:mtu:Rv2218 KEGG:mtv:RVBD_2218 PATRIC:18126750
TubercuList:Rv2218 Uniprot:P65283
Length = 311
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 117/280 (41%), Positives = 179/280 (63%)
Query: 11 ILKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRGVATFMIMGSI 70
I +KP WI+ + + + + KN++R L TVCEEA CPNI EC+ ATF+I G
Sbjct: 22 IERKPPWIKTRARIGPE-YTELKNLVRREGLHTVCEEAGCPNIFECWEDREATFLIGGDQ 80
Query: 71 CTRRCKFCNISHGRPDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCI 130
CTRRC FC I G+P LD +EP+++A ++ + L Y +T V RDDL DGG+ + + +
Sbjct: 81 CTRRCDFCQIDTGKPAELDRDEPRRVADSVRTMGLRYATVTGVARDDLPDGGAWLYAATV 140
Query: 131 KHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPGSDYKH 190
+ I++L+ +E+LIPDF + + ++F+ P+VL HN+ETVPR++K++RP Y+
Sbjct: 141 RAIKELNPSTGVELLIPDFNGEPTRLAEVFESG-PEVLAHNVETVPRIFKRIRPAFTYRR 199
Query: 191 SLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYLMPSRLHL 250
SL +L + ++TKS +++GLGE +E+ T + D+R+ DI+TI QYL PS H
Sbjct: 200 SLGVLTAARDA--GLVTKSNLILGLGETSDEVRTALGDLRDAGCDIVTITQYLRPSARHH 257
Query: 251 PVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADK 290
PV R++ P+ F +F + A LGF VL G ++RSSY A +
Sbjct: 258 PVERWVKPEEFVQFARFAEGLGFAGVLAGPLVRSSYRAGR 297
>TAIR|locus:505006586 [details] [associations]
symbol:AT5G08415 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0009107 "lipoate
biosynthetic process" evidence=IEA;ISS] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016992 "lipoate synthase activity"
evidence=IEA;ISS] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] HAMAP:MF_03129 InterPro:IPR003698 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF005963 SMART:SM00729 PANTHER:PTHR10949 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 Gene3D:3.20.20.70
GO:GO:0046872 GO:GO:0051539 EMBL:AL392174 eggNOG:COG0320
HOGENOM:HOG000235998 KO:K03644 ProtClustDB:PLN02428
UniPathway:UPA00538 GO:GO:0016992 TIGRFAMs:TIGR00510 OMA:PSAHHLP
EMBL:AB073745 EMBL:AY085458 EMBL:BT025549 IPI:IPI00543656
RefSeq:NP_568196.1 UniGene:At.32581 ProteinModelPortal:Q8LEE8
SMR:Q8LEE8 STRING:Q8LEE8 PaxDb:Q8LEE8 PRIDE:Q8LEE8
EnsemblPlants:AT5G08415.1 GeneID:830740 KEGG:ath:AT5G08415
TAIR:At5g08415 InParanoid:Q8LSZ8 PhylomeDB:Q8LEE8
Genevestigator:Q8LEE8 Uniprot:Q8LEE8
Length = 394
Score = 601 (216.6 bits), Expect = 1.5e-58, P = 1.5e-58
Identities = 130/295 (44%), Positives = 180/295 (61%)
Query: 5 KDKNIEILKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECF---GRGV 61
+D N+ KKP W+R K + F + K L NL TVCEEA CPNIGEC+ G GV
Sbjct: 91 RDPNV---KKPAWLRQKAPQG-ERFQEVKESLSRLNLNTVCEEAQCPNIGECWNGGGDGV 146
Query: 62 AT--FMIMGSICTRRCKFCNISHGR-PDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDL 118
AT M++G CTR C+FC + R P P D EP+ A I ++Y+VITSV+RDD+
Sbjct: 147 ATATIMVLGDTCTRGCRFCAVKTSRNPPPPDPMEPENTAKAIASWGVDYIVITSVDRDDI 206
Query: 119 HDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRL 178
DGGS HF +K +++ I IE L DFR + V + L DV HN+ETV RL
Sbjct: 207 PDGGSGHFAQTVKAMKRHKPDIMIECLTSDFRGDLEAVDTLVHSGL-DVFAHNVETVKRL 265
Query: 179 YKKVR-PGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDIL 237
+ VR P + Y+ S+++LK+ K P ++TK+ IM+GLGE DEE+ + D+R ++DIL
Sbjct: 266 QRLVRDPRAGYEQSMSVLKHAKISKPGMITKTSIMLGLGETDEELKEAMADLRAIDVDIL 325
Query: 238 TIGQYLMPSRLHLPVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADKHF 292
T+GQYL P+ LHL V Y+ P+ F+ +K +GF+ V G ++RSSY A + F
Sbjct: 326 TLGQYLQPTPLHLTVKEYVTPEKFDFWKTYGESIGFRYVASGPLVRSSYRAGELF 380
>FB|FBgn0029158 [details] [associations]
symbol:Las "Lipoic acid synthase" species:7227 "Drosophila
melanogaster" [GO:0009107 "lipoate biosynthetic process"
evidence=ISS] [GO:0005739 "mitochondrion" evidence=ISS] [GO:0016992
"lipoate synthase activity" evidence=ISS] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] HAMAP:MF_00206
InterPro:IPR003698 InterPro:IPR006638 InterPro:IPR007197
InterPro:IPR013785 Pfam:PF04055 PIRSF:PIRSF005963 SMART:SM00729
PANTHER:PTHR10949 GO:GO:0005739 EMBL:AE014296 Gene3D:3.20.20.70
GO:GO:0046872 GO:GO:0051539 eggNOG:COG0320 KO:K03644
UniPathway:UPA00538 GO:GO:0016992 TIGRFAMs:TIGR00510
GeneTree:ENSGT00390000006234 OMA:EEYVTPE EMBL:AY058557
EMBL:BT003750 RefSeq:NP_524183.2 UniGene:Dm.2512
ProteinModelPortal:Q7JQW6 IntAct:Q7JQW6 MINT:MINT-1650285
STRING:Q7JQW6 PaxDb:Q7JQW6 EnsemblMetazoa:FBtr0290266 GeneID:40259
KEGG:dme:Dmel_CG5231 CTD:40259 FlyBase:FBgn0029158
InParanoid:Q9VPF7 OrthoDB:EOG4RN8R2 PhylomeDB:Q7JQW6
GenomeRNAi:40259 NextBio:817833 Bgee:Q7JQW6 Uniprot:Q7JQW6
Length = 377
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 126/298 (42%), Positives = 178/298 (59%)
Query: 3 LTKDKNIEI-LKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRG- 60
L ++K E L+ P W++ + N+ K K +R L TVCEEA CPNIGEC+G G
Sbjct: 61 LRREKGEEQRLRLPPWLKTTIPVG-KNYAKIKAQMRELKLSTVCEEARCPNIGECWGGGE 119
Query: 61 ----VATFMIMGSICTRRCKFCNISHGR-PDPLDIEEPKKIAYTINKLKLNYVVITSVNR 115
AT M+MG CTR C+FC++ R P PLD+ EP A I L+Y+V+TSV+R
Sbjct: 120 HGTQTATIMLMGDTCTRGCRFCSVKTARKPPPLDVNEPVNTATAIASWGLDYIVLTSVDR 179
Query: 116 DDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETV 175
DDL DGGS H ++ I+ ++ I +E L+PDFR + V I L DV HNIETV
Sbjct: 180 DDLPDGGSEHIAETVREIKARNSNIFVECLVPDFRGNLECVKTIANSGL-DVYAHNIETV 238
Query: 176 PRLYKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNI 234
+L VR + Y+ +L +L K+ PN++TKS IM+GLGE DEEI + D+R +
Sbjct: 239 EKLTPYVRDRRAHYRQTLQVLTEAKRFNPNLITKSSIMLGLGETDEEIENTLKDLREAGV 298
Query: 235 DILTIGQYLMPSRLHLPVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADKHF 292
D +T+GQY+ P+ HL V Y+ P+ F+ +++ +LGF G ++RSSY A + F
Sbjct: 299 DCVTLGQYMQPTNKHLKVIEYVTPEKFKHWEERGNELGFLYTASGPLVRSSYKAGEFF 356
>TAIR|locus:2051384 [details] [associations]
symbol:LIP1 "lipoic acid synthase 1" species:3702
"Arabidopsis thaliana" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0009107 "lipoate biosynthetic process"
evidence=IEA;TAS] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0016992 "lipoate synthase activity" evidence=IEA;IGI]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] [GO:0000096
"sulfur amino acid metabolic process" evidence=RCA] [GO:0006546
"glycine catabolic process" evidence=RCA;TAS] [GO:0006636
"unsaturated fatty acid biosynthetic process" evidence=RCA]
[GO:0006733 "oxidoreduction coenzyme metabolic process"
evidence=RCA] [GO:0006766 "vitamin metabolic process" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0015995 "chlorophyll biosynthetic process" evidence=RCA]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0019344 "cysteine
biosynthetic process" evidence=RCA] [GO:0019748 "secondary
metabolic process" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] [GO:0044272 "sulfur compound biosynthetic process"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005759 "mitochondrial matrix" evidence=IDA]
HAMAP:MF_03128 InterPro:IPR003698 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF005963 SMART:SM00729 PANTHER:PTHR10949 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:3.20.20.70 GO:GO:0005759
GO:GO:0046872 GO:GO:0051539 GO:GO:0006546 EMBL:AC006234
EMBL:AB007987 EMBL:AY035143 EMBL:AF424583 EMBL:AY059077
IPI:IPI00539120 PIR:T44259 RefSeq:NP_179682.1 UniGene:At.21247
ProteinModelPortal:Q9ZWT1 STRING:Q9ZWT1 PaxDb:Q9ZWT1 PRIDE:Q9ZWT1
EnsemblPlants:AT2G20860.1 GeneID:816619 KEGG:ath:AT2G20860
TAIR:At2g20860 eggNOG:COG0320 HOGENOM:HOG000235998
InParanoid:Q9ZWT1 KO:K03644 OMA:PIGKASE ProtClustDB:PLN02428
UniPathway:UPA00538 Genevestigator:Q9ZWT1 GO:GO:0016992
TIGRFAMs:TIGR00510 Uniprot:Q9ZWT1
Length = 374
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 120/289 (41%), Positives = 177/289 (61%)
Query: 12 LKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECF-----GRGVATFMI 66
L KP W++ + I + + + K LR L TVCEEA CPN+GEC+ G AT MI
Sbjct: 71 LPKPKWMK-ESIPGGERYVQIKKKLRDLKLHTVCEEAKCPNLGECWSGGETGTATATIMI 129
Query: 67 MGSICTRRCKFCNISHGR-PDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSH 125
+G CTR C+FCN+ R P P D EP +A I ++YVVITSV+RDDL D GS H
Sbjct: 130 LGDTCTRGCRFCNVKTSRTPPPPDPNEPNNVAEAIASWGVDYVVITSVDRDDLPDQGSGH 189
Query: 126 FVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRLYKKVRPG 185
F ++ ++ L ++ IE L+PDFR V K+ K L DVL HNIETV L VR
Sbjct: 190 FAETVQRLKFLKPEMLIEALVPDFRGDGGCVEKVSKSGL-DVLAHNIETVEELQSFVRDH 248
Query: 186 -SDYKHSLNLLKNFKKLYP-NILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYL 243
+++K SL++L+ K+ P LTK+ +M+G GE ++++ + +R +D++T GQY+
Sbjct: 249 RANFKQSLDVLRMAKEYAPAGTLTKTSVMLGCGETPDQVVKTMEKVRAAGVDVMTFGQYM 308
Query: 244 MPSRLHLPVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADKHF 292
PS+ H+PV Y+ P FE+++ + ++GF+ V G M+RSSY A +++
Sbjct: 309 RPSKRHMPVAEYVTPDAFERYRLLGMEMGFRYVASGPMVRSSYKAGEYY 357
>ASPGD|ASPL0000071079 [details] [associations]
symbol:AN9486 species:162425 "Emericella nidulans"
[GO:0009249 "protein lipoylation" evidence=IEA] [GO:0009107
"lipoate biosynthetic process" evidence=IEA] [GO:0016992 "lipoate
synthase activity" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] HAMAP:MF_00206 InterPro:IPR003698 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF005963 SMART:SM00729 PANTHER:PTHR10949 GO:GO:0005739
Gene3D:3.20.20.70 GO:GO:0046872 GO:GO:0051539 GO:GO:0009249
EMBL:BN001303 eggNOG:COG0320 HOGENOM:HOG000235998 KO:K03644
UniPathway:UPA00538 GO:GO:0016992 TIGRFAMs:TIGR00510 OMA:DPHEPQR
EMBL:AACD01000201 RefSeq:XP_868868.1 ProteinModelPortal:Q5AQE4
STRING:Q5AQE4 EnsemblFungi:CADANIAT00005653 GeneID:3684084
KEGG:ani:AN9486.2 Uniprot:Q5AQE4
Length = 413
Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
Identities = 115/290 (39%), Positives = 176/290 (60%)
Query: 10 EILKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRG-----VATF 64
E+ + P+W++ I + N+ + K LR NL TVCEEA CPNI +C+G G AT
Sbjct: 99 EMTRLPSWLKTP-IPDSKNYQRLKKDLRGLNLHTVCEEARCPNISDCWGGGDKAAATATI 157
Query: 65 MIMGSICTRRCKFCNISHGR-PDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGS 123
M+MG CTR C+FC++ R P PLD EP+ A I++ L YVV+TSV+RDDL DGG+
Sbjct: 158 MLMGDTCTRGCRFCSVKTSRAPPPLDPHEPENTAEAISRWGLGYVVLTSVDRDDLADGGA 217
Query: 124 SHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRLYKKVR 183
HF + I++ + I +E L D+ + V + + L DV HN+ETV L VR
Sbjct: 218 RHFAETVIKIKQKAPNILVECLTGDYAGDLEMVGVVARSGL-DVYAHNVETVEALTPHVR 276
Query: 184 PG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQY 242
+ ++ SL +L+ KK P+++TK+ +M+GLGE +E++ + +R N+D++T GQY
Sbjct: 277 DRRATFQQSLRVLEAAKKAKPSLITKTSLMLGLGETEEQLWDALRQLRAVNVDVVTFGQY 336
Query: 243 LMPSRLHLPVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADKHF 292
+ P++ H+ VH Y+ P FE +++ A +GF G ++RSSY A + F
Sbjct: 337 MRPTKRHMAVHEYVTPDRFELWRQRALDMGFLYCASGPLVRSSYKAGEAF 386
>WB|WBGene00010809 [details] [associations]
symbol:M01F1.3 species:6239 "Caenorhabditis elegans"
[GO:0009107 "lipoate biosynthetic process" evidence=IEA]
[GO:0016992 "lipoate synthase activity" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] [GO:0003824
"catalytic activity" evidence=IEA] [GO:0051536 "iron-sulfur cluster
binding" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] HAMAP:MF_00206 InterPro:IPR003698 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF005963 SMART:SM00729 PANTHER:PTHR10949 GO:GO:0005739
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
Gene3D:3.20.20.70 GO:GO:0046872 GO:GO:0051539 eggNOG:COG0320
HOGENOM:HOG000235998 KO:K03644 UniPathway:UPA00538 GO:GO:0016992
TIGRFAMs:TIGR00510 GeneTree:ENSGT00390000006234 EMBL:Z46381
PIR:T23655 RefSeq:NP_497722.3 ProteinModelPortal:Q21452
STRING:Q21452 PaxDb:Q21452 EnsemblMetazoa:M01F1.3.1
EnsemblMetazoa:M01F1.3.2 EnsemblMetazoa:M01F1.3.3 GeneID:3564813
KEGG:cel:CELE_M01F1.3 UCSC:M01F1.3.1 CTD:3564813 WormBase:M01F1.3
InParanoid:Q21452 OMA:PSAHHLP NextBio:954083 Uniprot:Q21452
Length = 354
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 118/299 (39%), Positives = 181/299 (60%)
Query: 3 LTKDKNIEILKKPNWIRVKLI--SNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRG 60
L +K L+ P W++ + I S +N ++ K L+ L TVC+EA CPN+GEC+G
Sbjct: 47 LKLEKGDRRLRLPPWLKKEKILPSENENVSRLKKQLKHLKLATVCQEARCPNLGECWGGS 106
Query: 61 -----VATFMIMGSICTRRCKFCNISHGR-PDPLDIEEPKKIAYTINKLKLNYVVITSVN 114
AT M+MG CTR CKFC++ R P PLD EP+ + + + Y+V+TSV+
Sbjct: 107 DDSLATATIMLMGDTCTRGCKFCSVKTARAPPPLDPMEPENTSTAVASWGVEYIVLTSVD 166
Query: 115 RDDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIET 174
RDDL DGG+ H ++ ++ ++ IE L+PDF V K+ L DV HNIET
Sbjct: 167 RDDLPDGGADHLRKTVQLMKLKKPELLIECLLPDFAGDKISVEKMATSGL-DVYAHNIET 225
Query: 175 VPRLYKKVR-PGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHN 233
V RL VR P + Y+ SL+ L+ K++ P ++TK+ IM+GLGE ++EI + D+R N
Sbjct: 226 VERLTPWVRDPRAKYRQSLDALRYAKEVSPKLITKTSIMLGLGEAEDEIKQCLADLRASN 285
Query: 234 IDILTIGQYLMPSRLHLPVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADKHF 292
+D++T GQY+ P++ HL V ++ P+ F+++ + + KLGF V G ++RSSY A + +
Sbjct: 286 VDVVTFGQYMQPTKRHLLVKEWVTPEKFDQWAEYSKKLGFLYVASGPLVRSSYKAGEFY 344
>SGD|S000005722 [details] [associations]
symbol:LIP5 "Protein involved in biosynthesis of the coenzyme
lipoic acid" species:4932 "Saccharomyces cerevisiae" [GO:0016992
"lipoate synthase activity" evidence=IEA;ISA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0009107 "lipoate biosynthetic
process" evidence=IEA] [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0009249 "protein lipoylation" evidence=IEA;IMP]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016783 "sulfurtransferase
activity" evidence=IEA] HAMAP:MF_00206 InterPro:IPR003698
InterPro:IPR006638 InterPro:IPR007197 InterPro:IPR013785
Pfam:PF04055 PIRSF:PIRSF005963 SMART:SM00729 SGD:S000005722
PANTHER:PTHR10949 GO:GO:0005739 EMBL:BK006948 Gene3D:3.20.20.70
GO:GO:0046872 GO:GO:0051539 GO:GO:0009249 eggNOG:COG0320 KO:K03644
UniPathway:UPA00538 GO:GO:0016992 TIGRFAMs:TIGR00510
GeneTree:ENSGT00390000006234 OMA:EEYVTPE OrthoDB:EOG4G1QR3
EMBL:L11999 EMBL:Z75104 EMBL:AY558046 PIR:S42159 RefSeq:NP_014839.1
ProteinModelPortal:P32875 DIP:DIP-3931N IntAct:P32875
MINT:MINT-522178 STRING:P32875 PaxDb:P32875 PeptideAtlas:P32875
EnsemblFungi:YOR196C GeneID:854371 KEGG:sce:YOR196C CYGD:YOR196c
NextBio:976499 Genevestigator:P32875 GermOnline:YOR196C
Uniprot:P32875
Length = 414
Score = 556 (200.8 bits), Expect = 8.9e-54, P = 8.9e-54
Identities = 117/294 (39%), Positives = 176/294 (59%)
Query: 7 KNIEILKK-PNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFG-----RG 60
+N E KK P W++V + N++K K ++ L TVCEEA CPNIGEC+G +
Sbjct: 112 QNTEEAKKLPRWLKVPIPKGT-NYHKLKGDVKELGLSTVCEEARCPNIGECWGGKDKSKA 170
Query: 61 VATFMIMGSICTRRCKFCNISHGR-PDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLH 119
AT M++G CTR C+FC++ R P D EP+ A I + L YVV+T+V+RDDL
Sbjct: 171 TATIMLLGDTCTRGCRFCSVKTNRTPSKPDPMEPENTAEAIKRWGLGYVVLTTVDRDDLV 230
Query: 120 DGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRLY 179
DGG++H ++ I++ + +E L DFR + V I Q DV HN+ETV L
Sbjct: 231 DGGANHLAETVRKIKQKAPNTLVETLSGDFRGDLKMV-DIMAQCGLDVYAHNLETVESLT 289
Query: 180 KKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILT 238
VR + Y+ SL++L+ K P+++TK+ IM+GLGE DE+I + D+RN D++T
Sbjct: 290 PHVRDRRATYRQSLSVLERAKATVPSLITKTSIMLGLGETDEQITQTLKDLRNIQCDVVT 349
Query: 239 IGQYLMPSRLHLPVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADKHF 292
GQY+ P++ H+ V Y+ P+ F+ +K+ A ++GF G ++RSSY A + F
Sbjct: 350 FGQYMRPTKRHMKVVEYVKPEKFDYWKERALEMGFLYCASGPLVRSSYKAGEAF 403
>CGD|CAL0004271 [details] [associations]
symbol:LAB5 species:5476 "Candida albicans" [GO:0005739
"mitochondrion" evidence=IEA] [GO:0009249 "protein lipoylation"
evidence=IEA] HAMAP:MF_00206 InterPro:IPR003698 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055
PIRSF:PIRSF005963 SMART:SM00729 CGD:CAL0004271 PANTHER:PTHR10949
GO:GO:0005739 Gene3D:3.20.20.70 GO:GO:0046872 GO:GO:0051539
EMBL:AACQ01000023 EMBL:AACQ01000025 HOGENOM:HOG000235998 KO:K03644
UniPathway:UPA00538 GO:GO:0016992 TIGRFAMs:TIGR00510
RefSeq:XP_720294.1 RefSeq:XP_720524.1 ProteinModelPortal:P0CH67
GeneID:3637893 GeneID:3638133 KEGG:cal:CaO19.10290
KEGG:cal:CaO19.2774 Uniprot:P0CH67
Length = 386
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 111/297 (37%), Positives = 179/297 (60%)
Query: 5 KDKNIEILKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFG----RG 60
KD N ++ P+W++V + +F+ K +R L TVCEEA CPNIGEC+G
Sbjct: 71 KDPNAKL---PSWLKVPIPKG-KSFHNVKKDVRELKLATVCEEAKCPNIGECWGGKKSEA 126
Query: 61 VATFMIMGSICTRRCKFCNISHGR----PDPLDIEEPKKIAYTINKLKLNYVVITSVNRD 116
AT M++G CTR C+FC++ R PDP+ EP+ A I++ L YVV+T+V+RD
Sbjct: 127 TATIMLLGDTCTRGCRFCSVKTNRKPAAPDPM---EPENTAEAISRWGLGYVVLTTVDRD 183
Query: 117 DLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVP 176
DL DGG+ H ++ I++ + +I +E+L DFR ++ V +I + DV HN+ETV
Sbjct: 184 DLVDGGARHLAETVQKIKQKAPQILVEVLGGDFRGDLSMV-EILADSGLDVYAHNLETVE 242
Query: 177 RLYKKVRPG-SDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNID 235
L +R + Y+ SL +L+ K+ +++TK+ +M+G GE D+++L + D+R D
Sbjct: 243 ALTPHIRDRRATYRQSLAVLERAKQTNSSLITKTSLMLGFGETDDQVLQTLRDLREIGCD 302
Query: 236 ILTIGQYLMPSRLHLPVHRYLHPKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADKHF 292
++T GQY+ P++ H+ V Y+ P+ F+ ++ A +GF V G ++RSSY A + F
Sbjct: 303 VVTFGQYMRPTKRHMKVVEYIKPEKFDYWRDTALDMGFLYVASGPLVRSSYKAGEAF 359
>UNIPROTKB|Q2KIH9 [details] [associations]
symbol:LIAS "Lipoyl synthase, mitochondrial" species:9913
"Bos taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] [GO:0009249
"protein lipoylation" evidence=IEA] [GO:0016992 "lipoate synthase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] HAMAP:MF_00206 InterPro:IPR003698 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055 SMART:SM00729
PANTHER:PTHR10949 GO:GO:0005739 Gene3D:3.20.20.70 GO:GO:0046872
GO:GO:0051539 GO:GO:0009249 HOGENOM:HOG000235998
UniPathway:UPA00538 GO:GO:0016992 UniGene:Bt.9756
GeneTree:ENSGT00390000006234 HOVERGEN:HBG023328 OrthoDB:EOG4T1HMX
EMBL:DAAA02017470 EMBL:BC112631 IPI:IPI00907894 STRING:Q2KIH9
Ensembl:ENSBTAT00000053678 Uniprot:Q2KIH9
Length = 298
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 105/228 (46%), Positives = 150/228 (65%)
Query: 2 NLTKDKNIEILKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRG- 60
NL + K E L+ P W++ ++ N+NK KN LR NL TVCEEA CPNIGEC+G G
Sbjct: 65 NLKRQKG-ERLRLPPWLKTEIPMG-KNYNKLKNTLRNLNLHTVCEEARCPNIGECWGGGE 122
Query: 61 ----VATFMIMGSICTRRCKFCNISHGR-PDPLDIEEPKKIAYTINKLKLNYVVITSVNR 115
AT M+MG CTR C+FC++ R P PLD EP A I + L+YVV+TSV+R
Sbjct: 123 YATATATIMLMGDTCTRGCRFCSVKTARNPPPLDANEPYNTAKAIAEWGLDYVVLTSVDR 182
Query: 116 DDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETV 175
DD+ DGG+ HF + ++++ + KI +E L PDFR + + K+ L DV HN+ETV
Sbjct: 183 DDMPDGGAEHFAKTVSYLKERNPKILVECLTPDFRGDLKAIEKVALSGL-DVYAHNVETV 241
Query: 176 PRLYKKVR-PGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEI 222
P L +KVR P +++ SL +LK+ K++ P++++K+ IM+GLGENDE++
Sbjct: 242 PELQRKVRDPRANFDQSLRVLKHAKEVRPDVISKTSIMLGLGENDEQV 289
>UNIPROTKB|E1C146 [details] [associations]
symbol:E1C146 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0016992 "lipoate synthase activity"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR003698 InterPro:IPR013785
PANTHER:PTHR10949 Gene3D:3.20.20.70 GO:GO:0051539 GO:GO:0016992
GeneTree:ENSGT00390000006234 EMBL:AADN02031187 IPI:IPI00587320
Ensembl:ENSGALT00000029228 ArrayExpress:E1C146 Uniprot:E1C146
Length = 151
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 75/149 (50%), Positives = 98/149 (65%)
Query: 28 NFNKTKNILRANNLVTVCEEASCPNIGECFGRG-----VATFMIMGSICTRRCKFCNISH 82
N+NK KN LR+ NL TVCEEA CPNIGEC+G G AT M+MG CTR C+FC++
Sbjct: 4 NYNKLKNTLRSLNLHTVCEEARCPNIGECWGGGEYATATATIMLMGDTCTRGCRFCSVKT 63
Query: 83 GR-PDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSHFVSCIKHIRKLSTKIK 141
+ P PLD EEP A I + L+YVV+TSV+RDD+ DGG+ HF + H+++ ++KI
Sbjct: 64 AKNPPPLDPEEPYNTAKAIAEWGLDYVVLTSVDRDDMPDGGAEHFAKTVSHLKERNSKIV 123
Query: 142 IEILIPDFRNQINHVLKIFKQALPDVLNH 170
+E L PDFR +N V K+ L DV H
Sbjct: 124 VECLTPDFRGDLNAVEKVALSGL-DVYAH 151
>UNIPROTKB|D6RCP8 [details] [associations]
symbol:LIAS "Lipoyl synthase, mitochondrial" species:9606
"Homo sapiens" [GO:0016992 "lipoate synthase activity"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] InterPro:IPR003698 InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055 SMART:SM00729
PANTHER:PTHR10949 Gene3D:3.20.20.70 GO:GO:0051539
HOGENOM:HOG000235998 GO:GO:0016992 HGNC:HGNC:16429 EMBL:AC021148
IPI:IPI00964806 ProteinModelPortal:D6RCP8 Ensembl:ENST00000513731
ArrayExpress:D6RCP8 Bgee:D6RCP8 Uniprot:D6RCP8
Length = 242
Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 66/155 (42%), Positives = 102/155 (65%)
Query: 139 KIKIEILIPDFRNQINHVLKIFKQALPDVLNHNIETVPRLYKKVR-PGSDYKHSLNLLKN 197
KI +E L PDFR + + K+ L DV HN+ETVP L KVR P +++ SL +LK+
Sbjct: 76 KILVECLTPDFRGDLKAIEKVALSGL-DVYAHNVETVPELQSKVRDPRANFDQSLRVLKH 134
Query: 198 FKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDILTIGQYLMPSRLHLPVHRYLH 257
KK+ P++++K+ IM+GLGENDE++ + +R ++D LT+GQY+ P+R HL V Y+
Sbjct: 135 AKKVQPDVISKTSIMLGLGENDEQVYATMKALREADVDCLTLGQYMQPTRRHLKVEEYIT 194
Query: 258 PKFFEKFKKIAYKLGFKNVLVGSMIRSSYMADKHF 292
P+ F+ ++K+ +LGF G ++RSSY A + F
Sbjct: 195 PEKFKYWEKVGNELGFHYTASGPLVRSSYKAGEFF 229
>UNIPROTKB|C9JCF6 [details] [associations]
symbol:LIAS "Lipoyl synthase, mitochondrial" species:9606
"Homo sapiens" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0009249 "protein lipoylation" evidence=IEA] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] [GO:0016992 "lipoate
synthase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] HAMAP:MF_00206 InterPro:IPR003698 InterPro:IPR006638
InterPro:IPR013785 SMART:SM00729 PANTHER:PTHR10949 GO:GO:0005739
Gene3D:3.20.20.70 GO:GO:0046872 GO:GO:0051539 GO:GO:0009249
HOGENOM:HOG000235998 UniPathway:UPA00538 GO:GO:0016992
HGNC:HGNC:16429 EMBL:AC021148 IPI:IPI00657781
ProteinModelPortal:C9JCF6 STRING:C9JCF6 Ensembl:ENST00000381846
ArrayExpress:C9JCF6 Bgee:C9JCF6 Uniprot:C9JCF6
Length = 329
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 75/174 (43%), Positives = 104/174 (59%)
Query: 2 NLTKDKNIEILKKPNWIRVKLISNIDNFNKTKNILRANNLVTVCEEASCPNIGECFGRG- 60
NL + K E L+ P W++ ++ N+NK KN LR NL TVCEEA CPNIGEC+G G
Sbjct: 65 NLKRQKG-ERLRLPPWLKTEIPMG-KNYNKLKNTLRNLNLHTVCEEARCPNIGECWGGGE 122
Query: 61 ----VATFMIMGSICTRRCKFCNISHGR-PDPLDIEEPKKIAYTINKLKLNYVVITSVNR 115
AT M+MG CTR C+FC++ R P PLD EP A I + L+YVV+TSV+R
Sbjct: 123 YATATATIMLMGDTCTRGCRFCSVKTARNPPPLDASEPYNTAKAIAEWGLDYVVLTSVDR 182
Query: 116 DDLHDGGSSHFVSCIKHIRKLSTKIKIEILIPDFRNQINHVLKIFKQALPDVLN 169
DD+ DGG+ H + ++++ K+ +F +Q VLK K+ PDV++
Sbjct: 183 DDMPDGGAEHIAKTVSYLKES----KVRDPRANF-DQSLRVLKHAKKVQPDVIS 231
Score = 263 (97.6 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 53/132 (40%), Positives = 87/132 (65%)
Query: 164 LPDV-LNHNIETVPRLYK-KVR-PGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDE 220
+PD H +TV L + KVR P +++ SL +LK+ KK+ P++++K+ IM+GLGENDE
Sbjct: 185 MPDGGAEHIAKTVSYLKESKVRDPRANFDQSLRVLKHAKKVQPDVISKTSIMLGLGENDE 244
Query: 221 EILTVIHDMRNHNIDILTIGQYLMPSRLHLPVHRYLHPKFFEKFKKIAYKLGFKNVLVGS 280
++ + +R ++D LT+GQY+ P+R HL V Y+ P+ F+ ++K+ +LGF G
Sbjct: 245 QVYATMKALREADVDCLTLGQYMQPTRRHLKVEEYITPEKFKYWEKVGNELGFHYTASGP 304
Query: 281 MIRSSYMADKHF 292
++RSSY A + F
Sbjct: 305 LVRSSYKAGEFF 316
>UNIPROTKB|Q3AET2 [details] [associations]
symbol:CHY_0494 "Radical SAM domain protein" species:246194
"Carboxydothermus hydrogenoformans Z-2901" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055 SMART:SM00729
GO:GO:0003824 Gene3D:3.20.20.70 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008152 GO:GO:0051536
RefSeq:YP_359352.1 ProteinModelPortal:Q3AET2 STRING:Q3AET2
GeneID:3727724 KEGG:chy:CHY_0494 PATRIC:21274137 eggNOG:COG2516
HOGENOM:HOG000232254 OMA:YYNERPG ProtClustDB:CLSK865237
BioCyc:CHYD246194:GJCN-495-MONOMER Uniprot:Q3AET2
Length = 316
Score = 117 (46.2 bits), Expect = 0.00019, P = 0.00019
Identities = 47/180 (26%), Positives = 85/180 (47%)
Query: 64 FMIMGSICTRRCKFCN---ISHGRPDPLD-IEEPKKIAYTINKLKLNYVVITSVNRDDLH 119
+ ++G C C FC+ SH P+ L + PK + K L + + R
Sbjct: 26 YFMLGEKCQHDCAFCSQARSSHATPELLSRVTWPKIEEEAVFKA-LGEEP-SEIRRACFQ 83
Query: 120 DGGSSH-FVSCIKHIRKLSTKIKIEILIP-DFRNQINHVLKIFKQALPDVLNHNIE-TVP 176
+ F ++ +KL K I + + + R+ I +IF A D ++ ++ V
Sbjct: 84 VVRTKESFAEILEKAKKLKEKAAIPLCVSYNVRDAIE-AQQIFA-AGADHISLPLDGAVK 141
Query: 177 RLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDI 236
R+Y+KV+ G +Y+ N L + + +P + + ++ GLGE +EE+L V+ D+ H I I
Sbjct: 142 RVYEKVK-GKNYEKFYNKLLDLAEKFPGKIG-THLIAGLGETEEEMLKVMDDLLKHQITI 199
>TIGR_CMR|CHY_0494 [details] [associations]
symbol:CHY_0494 "radical SAM domain protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003824 "catalytic activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR006638
InterPro:IPR007197 InterPro:IPR013785 Pfam:PF04055 SMART:SM00729
GO:GO:0003824 Gene3D:3.20.20.70 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008152 GO:GO:0051536
RefSeq:YP_359352.1 ProteinModelPortal:Q3AET2 STRING:Q3AET2
GeneID:3727724 KEGG:chy:CHY_0494 PATRIC:21274137 eggNOG:COG2516
HOGENOM:HOG000232254 OMA:YYNERPG ProtClustDB:CLSK865237
BioCyc:CHYD246194:GJCN-495-MONOMER Uniprot:Q3AET2
Length = 316
Score = 117 (46.2 bits), Expect = 0.00019, P = 0.00019
Identities = 47/180 (26%), Positives = 85/180 (47%)
Query: 64 FMIMGSICTRRCKFCN---ISHGRPDPLD-IEEPKKIAYTINKLKLNYVVITSVNRDDLH 119
+ ++G C C FC+ SH P+ L + PK + K L + + R
Sbjct: 26 YFMLGEKCQHDCAFCSQARSSHATPELLSRVTWPKIEEEAVFKA-LGEEP-SEIRRACFQ 83
Query: 120 DGGSSH-FVSCIKHIRKLSTKIKIEILIP-DFRNQINHVLKIFKQALPDVLNHNIE-TVP 176
+ F ++ +KL K I + + + R+ I +IF A D ++ ++ V
Sbjct: 84 VVRTKESFAEILEKAKKLKEKAAIPLCVSYNVRDAIE-AQQIFA-AGADHISLPLDGAVK 141
Query: 177 RLYKKVRPGSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRNHNIDI 236
R+Y+KV+ G +Y+ N L + + +P + + ++ GLGE +EE+L V+ D+ H I I
Sbjct: 142 RVYEKVK-GKNYEKFYNKLLDLAEKFPGKIG-THLIAGLGETEEEMLKVMDDLLKHQITI 199
>CGD|CAL0002565 [details] [associations]
symbol:BIO2 species:5476 "Candida albicans" [GO:0004076
"biotin synthase activity" evidence=NAS] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0009102 "biotin biosynthetic
process" evidence=IEA] HAMAP:MF_01694 InterPro:IPR002684
InterPro:IPR006638 InterPro:IPR007197 InterPro:IPR010722
InterPro:IPR013785 Pfam:PF04055 Pfam:PF06968 SMART:SM00729
SMART:SM00876 CGD:CAL0002565 Gene3D:3.20.20.70 GO:GO:0051536
EMBL:AACQ01000044 EMBL:AACQ01000043 GO:GO:0009102 eggNOG:COG0502
HOGENOM:HOG000239957 KO:K01012 GO:GO:0004076 InterPro:IPR024177
PIRSF:PIRSF001619 TIGRFAMs:TIGR00433 RefSeq:XP_718258.1
RefSeq:XP_718353.1 ProteinModelPortal:Q5A974 STRING:Q5A974
GeneID:3640043 GeneID:3640106 KEGG:cal:CaO19.10124
KEGG:cal:CaO19.2593 Uniprot:Q5A974
Length = 374
Score = 113 (44.8 bits), Expect = 0.00072, P = 0.00072
Identities = 43/167 (25%), Positives = 73/167 (43%)
Query: 71 CTRRCKFCNIS--HG---RPDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSH 125
CT C +C+ S H + + LD++ IA V + S RD G S
Sbjct: 100 CTENCSYCSQSSKHDTGVQAEKLDLDAVMDIARDAKARGGTRVCLGSAWRD--MQGRKSA 157
Query: 126 FVSCIKHIRKLSTKIKIEILIPDFRNQINHV-LKIFKQALPDVLNHNIETVPRLYKKVRP 184
K +++++ ++K+E + IN +I KQ NHNI+T Y V
Sbjct: 158 LDKISKVVKQINDELKLETCVT--LGMINEKQAEILKQNGLTAYNHNIDTSREHYPNVVT 215
Query: 185 GSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRN 231
Y L +KN +K I +G ++GLGE ++ ++ ++ + N
Sbjct: 216 TRTYDERLETIKNVQKA--GIKACTGGILGLGETAQDHVSFLYTLSN 260
>UNIPROTKB|Q5A974 [details] [associations]
symbol:BIO2 "Putative uncharacterized protein BIO2"
species:237561 "Candida albicans SC5314" [GO:0004076 "biotin
synthase activity" evidence=NAS] HAMAP:MF_01694 InterPro:IPR002684
InterPro:IPR006638 InterPro:IPR007197 InterPro:IPR010722
InterPro:IPR013785 Pfam:PF04055 Pfam:PF06968 SMART:SM00729
SMART:SM00876 CGD:CAL0002565 Gene3D:3.20.20.70 GO:GO:0051536
EMBL:AACQ01000044 EMBL:AACQ01000043 GO:GO:0009102 eggNOG:COG0502
HOGENOM:HOG000239957 KO:K01012 GO:GO:0004076 InterPro:IPR024177
PIRSF:PIRSF001619 TIGRFAMs:TIGR00433 RefSeq:XP_718258.1
RefSeq:XP_718353.1 ProteinModelPortal:Q5A974 STRING:Q5A974
GeneID:3640043 GeneID:3640106 KEGG:cal:CaO19.10124
KEGG:cal:CaO19.2593 Uniprot:Q5A974
Length = 374
Score = 113 (44.8 bits), Expect = 0.00072, P = 0.00072
Identities = 43/167 (25%), Positives = 73/167 (43%)
Query: 71 CTRRCKFCNIS--HG---RPDPLDIEEPKKIAYTINKLKLNYVVITSVNRDDLHDGGSSH 125
CT C +C+ S H + + LD++ IA V + S RD G S
Sbjct: 100 CTENCSYCSQSSKHDTGVQAEKLDLDAVMDIARDAKARGGTRVCLGSAWRD--MQGRKSA 157
Query: 126 FVSCIKHIRKLSTKIKIEILIPDFRNQINHV-LKIFKQALPDVLNHNIETVPRLYKKVRP 184
K +++++ ++K+E + IN +I KQ NHNI+T Y V
Sbjct: 158 LDKISKVVKQINDELKLETCVT--LGMINEKQAEILKQNGLTAYNHNIDTSREHYPNVVT 215
Query: 185 GSDYKHSLNLLKNFKKLYPNILTKSGIMVGLGENDEEILTVIHDMRN 231
Y L +KN +K I +G ++GLGE ++ ++ ++ + N
Sbjct: 216 TRTYDERLETIKNVQKA--GIKACTGGILGLGETAQDHVSFLYTLSN 260
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.324 0.141 0.424 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 293 293 0.00091 115 3 11 22 0.47 33
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 40
No. of states in DFA: 603 (64 KB)
Total size of DFA: 213 KB (2118 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 29.12u 0.10s 29.22t Elapsed: 00:00:04
Total cpu time: 29.13u 0.10s 29.23t Elapsed: 00:00:04
Start: Thu Aug 15 15:36:10 2013 End: Thu Aug 15 15:36:14 2013