BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2899
(139 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A4GAG8|ATPE_HERAR ATP synthase epsilon chain OS=Herminiimonas arsenicoxydans GN=atpC
PE=3 SV=1
Length = 140
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 99/137 (72%), Gaps = 1/137 (0%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
MR+++VS E +FS + EF+ LPGE G+LG+ P H+PLIT I+PG +RIKI+ + E++
Sbjct: 5 MRVEVVSAEEEIFSGEA-EFVALPGESGELGILPGHTPLITRIRPGAVRIKIAGQAEDEF 63
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+FV+GGI+++QP V VLADTAI G+DL E + + K L E L NK+S IDY+ +A+L
Sbjct: 64 VFVAGGILEVQPHGVTVLADTAIRGADLDEAKAAEAKRLAEEALVNKESKIDYAQAQAEL 123
Query: 121 AIIIAQLKTIQYLRFKK 137
A IAQL IQ LR K+
Sbjct: 124 ATAIAQLAAIQRLRQKR 140
>sp|A6T469|ATPE_JANMA ATP synthase epsilon chain OS=Janthinobacterium sp. (strain
Marseille) GN=atpC PE=3 SV=1
Length = 140
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/137 (51%), Positives = 98/137 (71%), Gaps = 1/137 (0%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
MR+D+VS E +FS + EF+ LPGE G+LG+ P H+PLIT I+PG +RIK++ + E++
Sbjct: 5 MRVDVVSAEEEIFSGE-AEFVALPGESGELGILPGHTPLITRIRPGAVRIKVTGQAEDEF 63
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+FV+GGI+++QP V VLADTAI G DL E + + K L E L NK+S IDY+ +A+L
Sbjct: 64 VFVAGGILEVQPHVVTVLADTAIRGGDLDEAKAAEAKQLAEEALVNKESKIDYAQAQAEL 123
Query: 121 AIIIAQLKTIQYLRFKK 137
A IAQL IQ LR K+
Sbjct: 124 ASAIAQLAAIQRLRQKR 140
>sp|B2JJ94|ATPE_BURP8 ATP synthase epsilon chain OS=Burkholderia phymatum (strain DSM
17167 / STM815) GN=atpC PE=3 SV=1
Length = 141
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 94/134 (70%), Gaps = 2/134 (1%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
+++D+VS E +FS + +F+ LPGE G+LG+ P H+PLIT I+PG +RI+ S+ EE+
Sbjct: 4 IKVDVVSAEEQIFSGQ-AKFVALPGEAGELGILPGHTPLITRIRPGAVRIE-SENGEEEF 61
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+FV+GGI+++QP +V VLADTAI G DL E + E+ + E L N SN++Y+ +A+L
Sbjct: 62 VFVAGGILEVQPGAVTVLADTAIRGKDLDEAKAEQARKRAEEALQNTGSNLEYATAQAEL 121
Query: 121 AIIIAQLKTIQYLR 134
A AQL IQ LR
Sbjct: 122 AYATAQLAAIQRLR 135
>sp|B2T7J9|ATPE_BURPP ATP synthase epsilon chain OS=Burkholderia phytofirmans (strain DSM
17436 / PsJN) GN=atpC PE=3 SV=1
Length = 141
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 93/134 (69%), Gaps = 2/134 (1%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
+++D+VS E +FS + +F+ LPGE G+LG+ P H+PLIT I+PG +RI+ ++ EE+
Sbjct: 4 IKVDVVSAEEQIFSGQ-AKFVALPGEAGELGILPGHTPLITRIRPGAVRIE-AENGEEEF 61
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+FV+GGI++IQP +V VLADTAI G DL E + E + E L N SN++Y+ +A+L
Sbjct: 62 VFVAGGILEIQPGAVTVLADTAIRGKDLDEAKAEDARKRAEEALQNTGSNLEYATAQAEL 121
Query: 121 AIIIAQLKTIQYLR 134
A AQL IQ LR
Sbjct: 122 AYATAQLAAIQRLR 135
>sp|Q13SQ3|ATPE1_BURXL ATP synthase epsilon chain 1 OS=Burkholderia xenovorans (strain
LB400) GN=atpC1 PE=3 SV=1
Length = 141
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 63/134 (47%), Positives = 93/134 (69%), Gaps = 2/134 (1%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
+++D+VS E +FS + +F+ LPGE G+LG+ P H+PLIT I+PG +RI+ ++ EE+
Sbjct: 4 IKVDVVSAEEQIFSGQ-AKFVALPGEAGELGILPGHTPLITRIRPGAVRIE-AENGEEEF 61
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+FV+GGI+++QP +V VLADTAI G DL E + E + E L N SN++Y+ +A+L
Sbjct: 62 VFVAGGILEVQPGAVTVLADTAIRGKDLDEAKAEDARKRAEEALQNTGSNLEYATAQAEL 121
Query: 121 AIIIAQLKTIQYLR 134
A AQL IQ LR
Sbjct: 122 AYATAQLAAIQRLR 135
>sp|Q1GXN1|ATPE_METFK ATP synthase epsilon chain OS=Methylobacillus flagellatus (strain
KT / ATCC 51484 / DSM 6875) GN=atpC PE=3 SV=1
Length = 141
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
+ +D+VS E +FS + EF+ P +LG++G+YP H+PLIT IKPG +R+K++ EE+
Sbjct: 5 IHLDVVSAEESIFSGE-AEFVAAPAKLGEVGIYPNHAPLITTIKPGVLRVKVANGGEEQA 63
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
I++SGG++++QP + VLADTAI G DL E + + K E L N S +DY+ +A+L
Sbjct: 64 IYISGGLLEVQPGVITVLADTAIRGHDLDEVKAIEAKRAAEEALRNNASGVDYARAQAEL 123
Query: 121 AIIIAQLKTIQYLR 134
+ +AQL+TI+ LR
Sbjct: 124 SEALAQLQTIEQLR 137
>sp|A9BPU8|ATPE_DELAS ATP synthase epsilon chain OS=Delftia acidovorans (strain DSM 14801
/ SPH-1) GN=atpC PE=3 SV=1
Length = 138
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 95/135 (70%), Gaps = 2/135 (1%)
Query: 3 IDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKCIF 62
+D+VS E +FS + F+ LPGE G+LG++P H+PLIT IKPG +RI+++ EE +F
Sbjct: 6 VDVVSAEESIFSGE-ARFVALPGESGELGIFPRHTPLITRIKPGSVRIEMADGSEE-FVF 63
Query: 63 VSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKLAI 122
V+GGI+++QP+ V VL+DTAI G+DL ++ EK K+ E L N KS +D + +++LA+
Sbjct: 64 VAGGILEVQPNCVTVLSDTAIRGADLDAEKAEKAKLEAEEALKNAKSEVDLARAQSELAV 123
Query: 123 IIAQLKTIQYLRFKK 137
+ AQ+ ++ R K+
Sbjct: 124 MAAQIAALRKFRQKR 138
>sp|Q63PI1|ATPE_BURPS ATP synthase epsilon chain OS=Burkholderia pseudomallei (strain
K96243) GN=atpC PE=3 SV=1
Length = 141
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 94/133 (70%), Gaps = 2/133 (1%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
+++D+VS E +FS + +F+ LPGE G+LG+ P H+PLIT I+PG +RI+ S+ +E+
Sbjct: 4 IKVDVVSAEEQIFSGQ-AKFVALPGEAGELGILPGHTPLITRIRPGAVRIE-SESGDEEF 61
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+FV+GGI+++QP +V VLADTAI G DL + E+ + E L N KS+ID + +++L
Sbjct: 62 VFVAGGILEVQPGAVTVLADTAIRGKDLDAAKAEEARKRAEETLQNAKSDIDLAKAQSEL 121
Query: 121 AIIIAQLKTIQYL 133
A +AQL+ IQ L
Sbjct: 122 ATAMAQLEAIQRL 134
>sp|A3NF39|ATPE_BURP6 ATP synthase epsilon chain OS=Burkholderia pseudomallei (strain
668) GN=atpC PE=3 SV=1
Length = 141
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 94/133 (70%), Gaps = 2/133 (1%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
+++D+VS E +FS + +F+ LPGE G+LG+ P H+PLIT I+PG +RI+ S+ +E+
Sbjct: 4 IKVDVVSAEEQIFSGQ-AKFVALPGEAGELGILPGHTPLITRIRPGAVRIE-SESGDEEF 61
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+FV+GGI+++QP +V VLADTAI G DL + E+ + E L N KS+ID + +++L
Sbjct: 62 VFVAGGILEVQPGAVTVLADTAIRGKDLDAAKAEEARKRAEETLQNAKSDIDLAKAQSEL 121
Query: 121 AIIIAQLKTIQYL 133
A +AQL+ IQ L
Sbjct: 122 ATAMAQLEAIQRL 134
>sp|Q3JXW0|ATPE_BURP1 ATP synthase epsilon chain OS=Burkholderia pseudomallei (strain
1710b) GN=atpC PE=3 SV=1
Length = 141
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 94/133 (70%), Gaps = 2/133 (1%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
+++D+VS E +FS + +F+ LPGE G+LG+ P H+PLIT I+PG +RI+ S+ +E+
Sbjct: 4 IKVDVVSAEEQIFSGQ-AKFVALPGEAGELGILPGHTPLITRIRPGAVRIE-SESGDEEF 61
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+FV+GGI+++QP +V VLADTAI G DL + E+ + E L N KS+ID + +++L
Sbjct: 62 VFVAGGILEVQPGAVTVLADTAIRGKDLDAAKAEEARKRAEETLQNAKSDIDLAKAQSEL 121
Query: 121 AIIIAQLKTIQYL 133
A +AQL+ IQ L
Sbjct: 122 ATAMAQLEAIQRL 134
>sp|A3P0Y9|ATPE_BURP0 ATP synthase epsilon chain OS=Burkholderia pseudomallei (strain
1106a) GN=atpC PE=3 SV=1
Length = 141
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 94/133 (70%), Gaps = 2/133 (1%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
+++D+VS E +FS + +F+ LPGE G+LG+ P H+PLIT I+PG +RI+ S+ +E+
Sbjct: 4 IKVDVVSAEEQIFSGQ-AKFVALPGEAGELGILPGHTPLITRIRPGAVRIE-SESGDEEF 61
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+FV+GGI+++QP +V VLADTAI G DL + E+ + E L N KS+ID + +++L
Sbjct: 62 VFVAGGILEVQPGAVTVLADTAIRGKDLDAAKAEEARKRAEETLQNAKSDIDLAKAQSEL 121
Query: 121 AIIIAQLKTIQYL 133
A +AQL+ IQ L
Sbjct: 122 ATAMAQLEAIQRL 134
>sp|A1V8T0|ATPE_BURMS ATP synthase epsilon chain OS=Burkholderia mallei (strain SAVP1)
GN=atpC PE=3 SV=1
Length = 141
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 94/133 (70%), Gaps = 2/133 (1%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
+++D+VS E +FS + +F+ LPGE G+LG+ P H+PLIT I+PG +RI+ S+ +E+
Sbjct: 4 IKVDVVSAEEQIFSGQ-AKFVALPGEAGELGILPGHTPLITRIRPGAVRIE-SESGDEEF 61
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+FV+GGI+++QP +V VLADTAI G DL + E+ + E L N KS+ID + +++L
Sbjct: 62 VFVAGGILEVQPGAVTVLADTAIRGKDLDAAKAEEARKRAEETLQNAKSDIDLAKAQSEL 121
Query: 121 AIIIAQLKTIQYL 133
A +AQL+ IQ L
Sbjct: 122 ATAMAQLEAIQRL 134
>sp|Q62FR4|ATPE_BURMA ATP synthase epsilon chain OS=Burkholderia mallei (strain ATCC
23344) GN=atpC PE=3 SV=1
Length = 141
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 94/133 (70%), Gaps = 2/133 (1%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
+++D+VS E +FS + +F+ LPGE G+LG+ P H+PLIT I+PG +RI+ S+ +E+
Sbjct: 4 IKVDVVSAEEQIFSGQ-AKFVALPGEAGELGILPGHTPLITRIRPGAVRIE-SESGDEEF 61
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+FV+GGI+++QP +V VLADTAI G DL + E+ + E L N KS+ID + +++L
Sbjct: 62 VFVAGGILEVQPGAVTVLADTAIRGKDLDAAKAEEARKRAEETLQNAKSDIDLAKAQSEL 121
Query: 121 AIIIAQLKTIQYL 133
A +AQL+ IQ L
Sbjct: 122 ATAMAQLEAIQRL 134
>sp|A2S6J7|ATPE_BURM9 ATP synthase epsilon chain OS=Burkholderia mallei (strain NCTC
10229) GN=atpC PE=3 SV=1
Length = 141
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 94/133 (70%), Gaps = 2/133 (1%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
+++D+VS E +FS + +F+ LPGE G+LG+ P H+PLIT I+PG +RI+ S+ +E+
Sbjct: 4 IKVDVVSAEEQIFSGQ-AKFVALPGEAGELGILPGHTPLITRIRPGAVRIE-SESGDEEF 61
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+FV+GGI+++QP +V VLADTAI G DL + E+ + E L N KS+ID + +++L
Sbjct: 62 VFVAGGILEVQPGAVTVLADTAIRGKDLDAAKAEEARKRAEETLQNAKSDIDLAKAQSEL 121
Query: 121 AIIIAQLKTIQYL 133
A +AQL+ IQ L
Sbjct: 122 ATAMAQLEAIQRL 134
>sp|A3MQK0|ATPE_BURM7 ATP synthase epsilon chain OS=Burkholderia mallei (strain NCTC
10247) GN=atpC PE=3 SV=1
Length = 141
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 61/133 (45%), Positives = 94/133 (70%), Gaps = 2/133 (1%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
+++D+VS E +FS + +F+ LPGE G+LG+ P H+PLIT I+PG +RI+ S+ +E+
Sbjct: 4 IKVDVVSAEEQIFSGQ-AKFVALPGEAGELGILPGHTPLITRIRPGAVRIE-SESGDEEF 61
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+FV+GGI+++QP +V VLADTAI G DL + E+ + E L N KS+ID + +++L
Sbjct: 62 VFVAGGILEVQPGAVTVLADTAIRGKDLDAAKAEEARKRAEETLQNAKSDIDLAKAQSEL 121
Query: 121 AIIIAQLKTIQYL 133
A +AQL+ IQ L
Sbjct: 122 ATAMAQLEAIQRL 134
>sp|Q8XU77|ATPE1_RALSO ATP synthase epsilon chain 1 OS=Ralstonia solanacearum (strain
GMI1000) GN=atpC1 PE=3 SV=1
Length = 137
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/137 (44%), Positives = 89/137 (64%), Gaps = 3/137 (2%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
+ +D+VS E +FS + +F+ LPGE G+LG+ P H+PLIT IKPG +RI+ E+
Sbjct: 4 IHVDVVSAEQEIFSG-DAKFVALPGEAGELGILPGHTPLITRIKPGAVRIETEAG--EEF 60
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+FV+GGI+++QP V VLADTAI G DL E + + K E L N+ S++D + + +L
Sbjct: 61 VFVAGGILEVQPKHVTVLADTAIRGHDLDEAKANEAKRAAEEALQNQSSDLDLARAQGEL 120
Query: 121 AIIIAQLKTIQYLRFKK 137
A+ AQL I LR K+
Sbjct: 121 AVATAQLAAIARLRRKR 137
>sp|A9AJG5|ATPE_BURM1 ATP synthase epsilon chain OS=Burkholderia multivorans (strain ATCC
17616 / 249) GN=atpC PE=3 SV=1
Length = 141
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 92/133 (69%), Gaps = 2/133 (1%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
+++D+VS E +FS + +F+ LPGE G+LG+ P H+PLIT I+PG +RI++ +E
Sbjct: 4 IKVDVVSAEEQIFSGE-AKFVALPGETGELGILPGHTPLITRIRPGAVRIEVEGGSDE-F 61
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+FV+GGI+++QP +V VLADTAI G DL + E+ + E L N KS++D + +++L
Sbjct: 62 VFVAGGILEVQPGAVTVLADTAIRGKDLDAAKAEEARKRAEETLQNAKSDLDLAKAQSEL 121
Query: 121 AIIIAQLKTIQYL 133
A +AQL+ IQ L
Sbjct: 122 ATAMAQLEAIQRL 134
>sp|Q2STF0|ATPE_BURTA ATP synthase epsilon chain OS=Burkholderia thailandensis (strain
E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=atpC
PE=3 SV=1
Length = 141
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 93/133 (69%), Gaps = 2/133 (1%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
+++D+VS E +FS +F+ LPGE G+LG+ P H+PLIT I+PG +RI+ ++ +E+
Sbjct: 4 IKVDVVSAEEQIFSGL-AKFVALPGEAGELGILPGHTPLITRIRPGAVRIE-AESGDEEF 61
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+FV+GGI+++QP +V VLADTAI G DL + E+ + E L N KS+ID + +++L
Sbjct: 62 VFVAGGILEVQPGAVTVLADTAIRGKDLDAAKAEEARKRAEETLQNAKSDIDLAKAQSEL 121
Query: 121 AIIIAQLKTIQYL 133
A +AQL+ IQ L
Sbjct: 122 ATAMAQLEAIQRL 134
>sp|Q39KX5|ATPE_BURS3 ATP synthase epsilon chain OS=Burkholderia sp. (strain 383) GN=atpC
PE=3 SV=1
Length = 141
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 92/133 (69%), Gaps = 2/133 (1%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
+++D+VS E +FS + +F+ LPGE G+LG+ P H+PLIT I+PG +RI++ +E
Sbjct: 4 IKVDVVSAEEQIFSGE-AKFVALPGETGELGILPGHTPLITRIRPGAVRIEVEGGNDE-F 61
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+FV+GGI+++QP +V VLADTAI G DL + E+ + E L N KS++D + +++L
Sbjct: 62 VFVAGGILEVQPGAVTVLADTAIRGKDLDAAKAEEARKRAEETLQNAKSDLDLAKAQSEL 121
Query: 121 AIIIAQLKTIQYL 133
A +AQL+ IQ L
Sbjct: 122 ATAMAQLEAIQRL 134
>sp|Q0BJL4|ATPE_BURCM ATP synthase epsilon chain OS=Burkholderia ambifaria (strain ATCC
BAA-244 / AMMD) GN=atpC PE=3 SV=1
Length = 141
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 92/133 (69%), Gaps = 2/133 (1%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
+++D+VS E +FS + +F+ LPGE G+LG+ P H+PLIT I+PG +RI++ +E
Sbjct: 4 IKVDVVSAEEQIFSGE-AKFVALPGETGELGILPGHTPLITRIRPGAVRIEVEGGNDE-F 61
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+FV+GGI+++QP +V VLADTAI G DL + E+ + E L N KS++D + +++L
Sbjct: 62 VFVAGGILEVQPGAVTVLADTAIRGKDLDAAKAEEARKRAEETLQNAKSDLDLAKAQSEL 121
Query: 121 AIIIAQLKTIQYL 133
A +AQL+ IQ L
Sbjct: 122 ATAMAQLEAIQRL 134
>sp|B1YQL5|ATPE_BURA4 ATP synthase epsilon chain OS=Burkholderia ambifaria (strain
MC40-6) GN=atpC PE=3 SV=1
Length = 141
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 92/133 (69%), Gaps = 2/133 (1%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
+++D+VS E +FS + +F+ LPGE G+LG+ P H+PLIT I+PG +RI++ +E
Sbjct: 4 IKVDVVSAEEQIFSGE-AKFVALPGETGELGILPGHTPLITRIRPGAVRIEVEGGNDE-F 61
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+FV+GGI+++QP +V VLADTAI G DL + E+ + E L N KS++D + +++L
Sbjct: 62 VFVAGGILEVQPGAVTVLADTAIRGKDLDAAKAEEARKRAEETLQNAKSDLDLAKAQSEL 121
Query: 121 AIIIAQLKTIQYL 133
A +AQL+ IQ L
Sbjct: 122 ATAMAQLEAIQRL 134
>sp|Q1BRB1|ATPE1_BURCA ATP synthase epsilon chain 1 OS=Burkholderia cenocepacia (strain AU
1054) GN=atpC1 PE=3 SV=1
Length = 141
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 92/133 (69%), Gaps = 2/133 (1%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
+++D+VS E +FS + +F+ LPGE G+LG+ P H+PLIT I+PG +RI++ +E
Sbjct: 4 IKVDVVSAEEQIFSGE-AKFVALPGETGELGILPGHTPLITRIRPGAVRIEVEGGNDE-F 61
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+FV+GGI+++QP +V VLADTAI G DL + E+ + E L N KS++D + +++L
Sbjct: 62 VFVAGGILEVQPGAVTVLADTAIRGKDLDAAKAEEARKRAEETLQNAKSDLDLAKAQSEL 121
Query: 121 AIIIAQLKTIQYL 133
A +AQL+ IQ L
Sbjct: 122 ATAMAQLEAIQRL 134
>sp|Q2YCA2|ATPE_NITMU ATP synthase epsilon chain OS=Nitrosospira multiformis (strain ATCC
25196 / NCIMB 11849) GN=atpC PE=3 SV=1
Length = 139
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 61/136 (44%), Positives = 93/136 (68%), Gaps = 2/136 (1%)
Query: 3 IDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKCIF 62
+DIVS E ++S EF+V P E G++G+YP H+P++T IKPG +RIK K EE+ ++
Sbjct: 6 VDIVSAEESIYSGPA-EFLVAPAEGGEVGIYPQHTPMLTRIKPGSVRIKAPLK-EEELVY 63
Query: 63 VSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKLAI 122
VSGG+++IQPD V +LADTA+ G+DL E + + K E + ++ S +DY+ +A+L+
Sbjct: 64 VSGGMLEIQPDIVTILADTAVRGADLDEAKAIEAKKHAEEAVRDRASTLDYARAQAELSE 123
Query: 123 IIAQLKTIQYLRFKKY 138
IAQL IQ LR + +
Sbjct: 124 AIAQLAAIQKLRKRGH 139
>sp|B4EEZ0|ATPE_BURCJ ATP synthase epsilon chain OS=Burkholderia cepacia (strain J2315 /
LMG 16656) GN=atpC PE=3 SV=1
Length = 141
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/133 (44%), Positives = 92/133 (69%), Gaps = 2/133 (1%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
+++D+VS E +FS + +F+ LPGE G+LG+ P H+PLIT I+PG +RI++ +E
Sbjct: 4 IKVDVVSAEEQIFSGE-AKFVALPGETGELGILPGHTPLITRIRPGAVRIEVEGGNDE-F 61
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+FV+GGI+++QP +V VLADTAI G DL + E+ + E L N KS++D + +++L
Sbjct: 62 VFVAGGILEVQPGAVTVLADTAIRGKDLDAAKAEEARKRAEETLQNVKSDLDLAKAQSEL 121
Query: 121 AIIIAQLKTIQYL 133
A +AQL+ IQ L
Sbjct: 122 ATAMAQLEAIQRL 134
>sp|Q223D7|ATPE_RHOFD ATP synthase epsilon chain OS=Rhodoferax ferrireducens (strain DSM
15236 / ATCC BAA-621 / T118) GN=atpC PE=3 SV=1
Length = 138
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 92/135 (68%), Gaps = 2/135 (1%)
Query: 3 IDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKCIF 62
+D+VS E +FS + F+ LPGE+G+LG+YP H+PLI+ IK G +RI+ + EE +F
Sbjct: 6 VDVVSAEESIFSGE-ARFVALPGEVGELGIYPRHTPLISRIKAGSVRIEKADGSEE-FVF 63
Query: 63 VSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKLAI 122
V+GG++++QP+ V VL+DTAI G DL E++ K+ E + N K++ID + ++LA+
Sbjct: 64 VAGGLLEVQPNCVTVLSDTAIRGKDLDEEKANAAKLAAEEAMKNAKTDIDLARATSELAV 123
Query: 123 IIAQLKTIQYLRFKK 137
+ AQ+ ++ R KK
Sbjct: 124 MAAQIAALRKYRQKK 138
>sp|A1W2T8|ATPE_ACISJ ATP synthase epsilon chain OS=Acidovorax sp. (strain JS42) GN=atpC
PE=3 SV=1
Length = 138
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 93/135 (68%), Gaps = 2/135 (1%)
Query: 3 IDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKCIF 62
+D+VS E +FS + F+ LPGE G+LG+YP H+PLIT IKPG +RI++ EE +F
Sbjct: 6 VDVVSAEESIFSGE-ARFVALPGEAGELGIYPRHTPLITRIKPGSVRIELPDGNEE-FVF 63
Query: 63 VSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKLAI 122
V+GGI+++QPD V VL+DTAI G DL +++ ++ K E L N KS ID + +++LA+
Sbjct: 64 VAGGILEVQPDCVTVLSDTAIRGRDLDDQKAQEAKAAAEEALKNAKSEIDLARAQSELAV 123
Query: 123 IIAQLKTIQYLRFKK 137
+ AQ+ ++ R K+
Sbjct: 124 MAAQIAALRKFRQKR 138
>sp|B9MBA4|ATPE_ACIET ATP synthase epsilon chain OS=Acidovorax ebreus (strain TPSY)
GN=atpC PE=3 SV=1
Length = 138
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/135 (45%), Positives = 93/135 (68%), Gaps = 2/135 (1%)
Query: 3 IDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKCIF 62
+D+VS E +FS + F+ LPGE G+LG+YP H+PLIT IKPG +RI++ EE +F
Sbjct: 6 VDVVSAEESIFSGE-ARFVALPGEAGELGIYPRHTPLITRIKPGSVRIELPDGNEE-FVF 63
Query: 63 VSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKLAI 122
V+GGI+++QPD V VL+DTAI G DL +++ ++ K E L N KS ID + +++LA+
Sbjct: 64 VAGGILEVQPDCVTVLSDTAIRGRDLDDQKAQEAKAAAEEALKNAKSEIDLARAQSELAV 123
Query: 123 IIAQLKTIQYLRFKK 137
+ AQ+ ++ R K+
Sbjct: 124 MAAQIAALRKFRQKR 138
>sp|A1K1S3|ATPE_AZOSB ATP synthase epsilon chain OS=Azoarcus sp. (strain BH72) GN=atpC
PE=3 SV=1
Length = 141
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 81/120 (67%), Gaps = 1/120 (0%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
+ +DIVS E +FS EF+ LPGE G+LG+ P H PL+T IKPG +R+K+ + EE+
Sbjct: 5 VHVDIVSAEEQIFSGL-AEFVALPGEAGELGILPGHMPLMTRIKPGAVRVKVQNQAEEEV 63
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+FV+GG++++QP V VLADTAI G DL E + + K E L N+ S +DY+ +A+L
Sbjct: 64 VFVAGGLLEVQPGLVTVLADTAIRGKDLDEAKALEAKRKAEEALANQSSQLDYAKAQAEL 123
>sp|Q0A4M9|ATPE_ALHEH ATP synthase epsilon chain OS=Alkalilimnicola ehrlichei (strain
MLHE-1) GN=atpC PE=3 SV=1
Length = 140
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 88/139 (63%), Gaps = 2/139 (1%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
+ +DIVS E + S + + +V P GD+G+ P H+PL+T ++PG +R++ + EE+
Sbjct: 4 LHVDIVSAEQAIHSGE-AKMLVAPAREGDIGITPRHAPLLTKLRPGEVRVQ-DENGEERF 61
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+VSGGII++QP V VLADTA DL E ++ K E L N+K+ DYS +A+L
Sbjct: 62 FYVSGGIIEVQPHKVTVLADTAARARDLDEAAAQEAKRRAEEALANRKAGEDYSHVQAEL 121
Query: 121 AIIIAQLKTIQYLRFKKYK 139
A +AQL+T++ LR + +
Sbjct: 122 AEAMAQLQTLERLRRRAKR 140
>sp|Q5P4E1|ATPE_AROAE ATP synthase epsilon chain OS=Aromatoleum aromaticum (strain EbN1)
GN=atpC PE=3 SV=1
Length = 141
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 91/136 (66%), Gaps = 1/136 (0%)
Query: 3 IDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKCIF 62
+DIVS E +FS EF+ LPGE G+LG+ P H PL+T IKPG +R+K + EE+ +F
Sbjct: 7 VDIVSAEEQIFSGL-AEFVALPGEAGELGILPGHMPLMTRIKPGAVRVKRPDQAEEELVF 65
Query: 63 VSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKLAI 122
V+GGI+++QP V VLADTAI G DL E + + K + E L N+ + IDY+ +A+LA
Sbjct: 66 VAGGILEVQPGLVTVLADTAIRGKDLDEAKALEAKRIAEEALKNQSTEIDYAKAQAELAE 125
Query: 123 IIAQLKTIQYLRFKKY 138
IAQ+ IQ LR + +
Sbjct: 126 AIAQIAAIQKLRKRGH 141
>sp|Q0AJA9|ATPE_NITEC ATP synthase epsilon chain OS=Nitrosomonas eutropha (strain C91)
GN=atpC PE=3 SV=1
Length = 140
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 92/136 (67%), Gaps = 2/136 (1%)
Query: 3 IDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKCIF 62
+DIVS E ++S EFIV P +G++G+YP H+P++T IK G +R+K + +E+ I+
Sbjct: 7 LDIVSAEESIYSGPA-EFIVAPAVMGEVGIYPQHTPMLTRIKSGVVRVKAPLQDDEE-IY 64
Query: 63 VSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKLAI 122
VSGG++++QPD V +LADTA+ G DL E + + K E I+ NK S+I+Y+ +A+L
Sbjct: 65 VSGGMLEVQPDVVTILADTAVRGQDLDEAKALEAKRKAEEIMKNKTSDIEYARAQAELIE 124
Query: 123 IIAQLKTIQYLRFKKY 138
AQL I+ LR +++
Sbjct: 125 ATAQLAAIRKLRKRRH 140
>sp|Q12GP9|ATPE_POLSJ ATP synthase epsilon chain OS=Polaromonas sp. (strain JS666 / ATCC
BAA-500) GN=atpC PE=3 SV=1
Length = 138
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 92/137 (67%), Gaps = 2/137 (1%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
+ +D+VS E +FS + F+ LPGE G+LG+YP H+PLIT IKPG +RI+ EE
Sbjct: 4 IHVDVVSAEESIFSGE-ARFVALPGEAGELGIYPRHTPLITRIKPGAVRIEKEDGTEE-F 61
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+FV+GG++++QP+ V VL+DTAI G DL E + + K E L N +S+ID ++ +++L
Sbjct: 62 VFVAGGLLEVQPNCVTVLSDTAIRGKDLDETKASEAKAAAEEALKNARSDIDIAMAQSEL 121
Query: 121 AIIIAQLKTIQYLRFKK 137
++ AQ+ ++ R KK
Sbjct: 122 TVMAAQIAALRKYRQKK 138
>sp|A2SC71|ATPE_METPP ATP synthase epsilon chain OS=Methylibium petroleiphilum (strain
PM1) GN=atpC PE=3 SV=1
Length = 138
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/134 (45%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Query: 3 IDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKCIF 62
+D+VS E +FS + +F+ LPGE+G+LG+YP H+PLIT IKPG +R++ + EE+ +F
Sbjct: 6 VDVVSAEASIFSGE-AKFVALPGEMGELGIYPRHTPLITRIKPGAVRVERADNGEEEFVF 64
Query: 63 VSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKLAI 122
V+GGI+++QPD V VLADTAI G DL E + E+ K E + N KS+ID++ + + A
Sbjct: 65 VAGGILEVQPDRVTVLADTAIRGHDLDEAKAEEAKKAAEEAMKNAKSDIDFAKAQGEFAA 124
Query: 123 IIAQLKTIQYLRFK 136
+ AQ+ ++ R K
Sbjct: 125 MAAQIAALRKFRKK 138
>sp|A1WF59|ATPE_VEREI ATP synthase epsilon chain OS=Verminephrobacter eiseniae (strain
EF01-2) GN=atpC PE=3 SV=1
Length = 138
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 94/137 (68%), Gaps = 2/137 (1%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
+ +D+VS E +F+ + F+ LPGE+G+LG+YP H+PLIT IKPG +RI+++ EE
Sbjct: 4 IHVDVVSAEESIFTGQ-ARFVALPGEVGELGIYPRHAPLITRIKPGSVRIEMADGSEE-F 61
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+FV+GG++++QP V VL+DTAI G DL +++ K E L N KS++D + +++L
Sbjct: 62 VFVAGGLLEVQPHCVTVLSDTAIRGKDLDDEKANAAKAAAEEALKNAKSDLDLAKAQSEL 121
Query: 121 AIIIAQLKTIQYLRFKK 137
A++ AQ+ ++ R KK
Sbjct: 122 AVMAAQIAALRKFRQKK 138
>sp|A1VIV3|ATPE_POLNA ATP synthase epsilon chain OS=Polaromonas naphthalenivorans (strain
CJ2) GN=atpC PE=3 SV=1
Length = 138
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 94/137 (68%), Gaps = 2/137 (1%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
+ +D+VS E +FS + F+ LPGE G+LG+YP H+PLIT I+PG +RI+ + EE
Sbjct: 4 IHVDVVSAEESIFSGE-ARFVALPGEAGELGIYPRHTPLITRIRPGAVRIEKADGTEE-F 61
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+FV+GG++++QP+ V VL+DTAI G DL E + K L E L N K++ID ++ +++L
Sbjct: 62 VFVAGGLLEVQPNCVTVLSDTAIRGKDLDEAKATAAKALAEEALKNAKNDIDIAMAQSEL 121
Query: 121 AIIIAQLKTIQYLRFKK 137
A++ AQ+ ++ R KK
Sbjct: 122 AVMAAQIAALRKYRQKK 138
>sp|Q477Z0|ATPE_DECAR ATP synthase epsilon chain OS=Dechloromonas aromatica (strain RCB)
GN=atpC PE=3 SV=1
Length = 141
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 88/131 (67%), Gaps = 1/131 (0%)
Query: 4 DIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKCIFV 63
D+VS E +FS +E V PGE G+LG+ P H+PL+T IKPG IR+K+ + E + ++V
Sbjct: 8 DVVSAEESIFSGL-VEIAVFPGEAGELGILPRHTPLLTRIKPGTIRLKVPDQSEFELVYV 66
Query: 64 SGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKLAII 123
SGG++++QPD + VLADTAI DL E + + K E L N+ + +DY+ +A+LA
Sbjct: 67 SGGMLEVQPDMITVLADTAIRAHDLDEAKALEAKKRAEEALANRNAEMDYAAAEAELAQA 126
Query: 124 IAQLKTIQYLR 134
+AQL+ IQ LR
Sbjct: 127 VAQLQAIQRLR 137
>sp|Q3SI38|ATPE1_THIDA ATP synthase epsilon chain 1 OS=Thiobacillus denitrificans (strain
ATCC 25259) GN=atpC1 PE=3 SV=1
Length = 141
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 90/138 (65%), Gaps = 1/138 (0%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
MR+D+VS+EG LFS +E +V P E+G +G+YP H+PL+T +KPG +R++I + EE+
Sbjct: 5 MRLDVVSVEGSLFSG-IVESVVAPAEMGAVGIYPGHAPLLTRLKPGAVRLRIPYQAEEEI 63
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
++VSGG++++QP V +LAD A+ L E + EK E +L ++ + Y+ + +L
Sbjct: 64 VYVSGGMLEVQPYKVTLLADVAMREKALAEADLHAEKHRAEAVLKDRVTADAYARLEVEL 123
Query: 121 AIIIAQLKTIQYLRFKKY 138
A + ++ +Q LR + +
Sbjct: 124 AKALTYVQGVQKLRRRGF 141
>sp|Q7P094|ATPE_CHRVO ATP synthase epsilon chain OS=Chromobacterium violaceum (strain
ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB
9131 / NCTC 9757) GN=atpC PE=3 SV=1
Length = 140
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 90/138 (65%), Gaps = 1/138 (0%)
Query: 1 MRIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKC 60
MR+++VS E L+FS + EF+V P G++GVYP H PL+T IKPG +R+K+ EE
Sbjct: 4 MRVEVVSTEQLIFSGE-AEFVVAPATEGEIGVYPQHVPLLTRIKPGVLRLKVPGTKEEVL 62
Query: 61 IFVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKL 120
+ VSGG++++QP + VLADTAI G DL E + + K E+ L + ++ + A L
Sbjct: 63 VAVSGGMMEVQPSLITVLADTAIRGEDLDEARANEAKRAAEDALKHATDDMSTAKAHAAL 122
Query: 121 AIIIAQLKTIQYLRFKKY 138
A+ IA+LKT+ YL+ + +
Sbjct: 123 AVAIAELKTLDYLKKRAH 140
>sp|Q820S4|ATPE_NITEU ATP synthase epsilon chain OS=Nitrosomonas europaea (strain ATCC
19718 / NBRC 14298) GN=atpC PE=3 SV=1
Length = 140
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 90/136 (66%), Gaps = 2/136 (1%)
Query: 3 IDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKCIF 62
+DIVS E ++S EFIV P +G++G++P H+P++T IK G +R+K + +E+ ++
Sbjct: 7 LDIVSAEESIYSGPA-EFIVAPAVMGEVGIFPQHTPMLTRIKSGVVRVKAPLQDDEE-VY 64
Query: 63 VSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKLAI 122
VSGG++++QPD V +LADTA+ G DL E + + K E I+ NK S I+Y+ +A+L
Sbjct: 65 VSGGMLEVQPDVVTILADTAVRGKDLDEAKALEAKRKAEEIMKNKISEIEYARAQAELIE 124
Query: 123 IIAQLKTIQYLRFKKY 138
AQL IQ LR + +
Sbjct: 125 ATAQLAAIQKLRKRGH 140
>sp|C6DJH3|ATPE_PECCP ATP synthase epsilon chain OS=Pectobacterium carotovorum subsp.
carotovorum (strain PC1) GN=atpC PE=3 SV=1
Length = 139
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 89/133 (66%), Gaps = 2/133 (1%)
Query: 2 RIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKCI 61
+D+VS E +FS ++ I + G G+LG+YP H+PL+T IKPG +RI + + EE+ I
Sbjct: 6 HLDVVSAEQQMFSGL-VQKIQVTGSEGELGIYPGHAPLLTAIKPGMVRI-VKQHGEEEYI 63
Query: 62 FVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKLA 121
++SGGI+++QP++V VL+DTAI G DL E + + K E+ + N ++DY+ A+L+
Sbjct: 64 YLSGGILEVQPNTVTVLSDTAIRGQDLDEARALEAKRKAEDHIRNSHGDVDYAQASAELS 123
Query: 122 IIIAQLKTIQYLR 134
IA+L+ I+ R
Sbjct: 124 KAIAKLRVIELTR 136
>sp|Q3YVN5|ATPE_SHISS ATP synthase epsilon chain OS=Shigella sonnei (strain Ss046)
GN=atpC PE=3 SV=1
Length = 139
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 85/130 (65%), Gaps = 2/130 (1%)
Query: 2 RIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKCI 61
+D+VS E +FS +E I + G G+LG+YP H+PL+T IKPG IRI + + E+ I
Sbjct: 6 HLDVVSAEQQMFSGL-VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRI-VKQHGHEEFI 63
Query: 62 FVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKLA 121
++SGGI+++QP +V VLADTAI G DL E + + K E + + ++DY+ A+LA
Sbjct: 64 YLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELA 123
Query: 122 IIIAQLKTIQ 131
IAQL+ I+
Sbjct: 124 KAIAQLRVIE 133
>sp|P0A6E8|ATPE_SHIFL ATP synthase epsilon chain OS=Shigella flexneri GN=atpC PE=3 SV=2
Length = 139
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 85/130 (65%), Gaps = 2/130 (1%)
Query: 2 RIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKCI 61
+D+VS E +FS +E I + G G+LG+YP H+PL+T IKPG IRI + + E+ I
Sbjct: 6 HLDVVSAEQQMFSGL-VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRI-VKQHGHEEFI 63
Query: 62 FVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKLA 121
++SGGI+++QP +V VLADTAI G DL E + + K E + + ++DY+ A+LA
Sbjct: 64 YLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELA 123
Query: 122 IIIAQLKTIQ 131
IAQL+ I+
Sbjct: 124 KAIAQLRVIE 133
>sp|Q0SYU5|ATPE_SHIF8 ATP synthase epsilon chain OS=Shigella flexneri serotype 5b (strain
8401) GN=atpC PE=3 SV=1
Length = 139
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 85/130 (65%), Gaps = 2/130 (1%)
Query: 2 RIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKCI 61
+D+VS E +FS +E I + G G+LG+YP H+PL+T IKPG IRI + + E+ I
Sbjct: 6 HLDVVSAEQQMFSGL-VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRI-VKQHGHEEFI 63
Query: 62 FVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKLA 121
++SGGI+++QP +V VLADTAI G DL E + + K E + + ++DY+ A+LA
Sbjct: 64 YLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELA 123
Query: 122 IIIAQLKTIQ 131
IAQL+ I+
Sbjct: 124 KAIAQLRVIE 133
>sp|Q329S0|ATPE_SHIDS ATP synthase epsilon chain OS=Shigella dysenteriae serotype 1
(strain Sd197) GN=atpC PE=3 SV=1
Length = 139
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 85/130 (65%), Gaps = 2/130 (1%)
Query: 2 RIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKCI 61
+D+VS E +FS +E I + G G+LG+YP H+PL+T IKPG IRI + + E+ I
Sbjct: 6 HLDVVSAEQQMFSGL-VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRI-VKQHGHEEFI 63
Query: 62 FVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKLA 121
++SGGI+++QP +V VLADTAI G DL E + + K E + + ++DY+ A+LA
Sbjct: 64 YLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELA 123
Query: 122 IIIAQLKTIQ 131
IAQL+ I+
Sbjct: 124 KAIAQLRVIE 133
>sp|B7LK76|ATPE_ESCF3 ATP synthase epsilon chain OS=Escherichia fergusonii (strain ATCC
35469 / DSM 13698 / CDC 0568-73) GN=atpC PE=3 SV=1
Length = 139
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 85/130 (65%), Gaps = 2/130 (1%)
Query: 2 RIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKCI 61
+D+VS E +FS +E I + G G+LG+YP H+PL+T IKPG IRI + + E+ I
Sbjct: 6 HLDVVSAEQQMFSGL-VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRI-VKQHGHEEFI 63
Query: 62 FVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKLA 121
++SGGI+++QP +V VLADTAI G DL E + + K E + + ++DY+ A+LA
Sbjct: 64 YLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELA 123
Query: 122 IIIAQLKTIQ 131
IAQL+ I+
Sbjct: 124 KAIAQLRVIE 133
>sp|Q1R4K3|ATPE_ECOUT ATP synthase epsilon chain OS=Escherichia coli (strain UTI89 /
UPEC) GN=atpC PE=3 SV=1
Length = 139
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 85/130 (65%), Gaps = 2/130 (1%)
Query: 2 RIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKCI 61
+D+VS E +FS +E I + G G+LG+YP H+PL+T IKPG IRI + + E+ I
Sbjct: 6 HLDVVSAEQQMFSGL-VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRI-VKQHGHEEFI 63
Query: 62 FVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKLA 121
++SGGI+++QP +V VLADTAI G DL E + + K E + + ++DY+ A+LA
Sbjct: 64 YLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELA 123
Query: 122 IIIAQLKTIQ 131
IAQL+ I+
Sbjct: 124 KAIAQLRVIE 133
>sp|B1LL58|ATPE_ECOSM ATP synthase epsilon chain OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=atpC PE=3 SV=1
Length = 139
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 85/130 (65%), Gaps = 2/130 (1%)
Query: 2 RIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKCI 61
+D+VS E +FS +E I + G G+LG+YP H+PL+T IKPG IRI + + E+ I
Sbjct: 6 HLDVVSAEQQMFSGL-VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRI-VKQHGHEEFI 63
Query: 62 FVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKLA 121
++SGGI+++QP +V VLADTAI G DL E + + K E + + ++DY+ A+LA
Sbjct: 64 YLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELA 123
Query: 122 IIIAQLKTIQ 131
IAQL+ I+
Sbjct: 124 KAIAQLRVIE 133
>sp|B6I3W8|ATPE_ECOSE ATP synthase epsilon chain OS=Escherichia coli (strain SE11)
GN=atpC PE=3 SV=1
Length = 139
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 85/130 (65%), Gaps = 2/130 (1%)
Query: 2 RIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKCI 61
+D+VS E +FS +E I + G G+LG+YP H+PL+T IKPG IRI + + E+ I
Sbjct: 6 HLDVVSAEQQMFSGL-VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRI-VKQHGHEEFI 63
Query: 62 FVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKLA 121
++SGGI+++QP +V VLADTAI G DL E + + K E + + ++DY+ A+LA
Sbjct: 64 YLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELA 123
Query: 122 IIIAQLKTIQ 131
IAQL+ I+
Sbjct: 124 KAIAQLRVIE 133
>sp|B7NF47|ATPE_ECOLU ATP synthase epsilon chain OS=Escherichia coli O17:K52:H18 (strain
UMN026 / ExPEC) GN=atpC PE=3 SV=1
Length = 139
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 85/130 (65%), Gaps = 2/130 (1%)
Query: 2 RIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKCI 61
+D+VS E +FS +E I + G G+LG+YP H+PL+T IKPG IRI + + E+ I
Sbjct: 6 HLDVVSAEQQMFSGL-VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRI-VKQHGHEEFI 63
Query: 62 FVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKLA 121
++SGGI+++QP +V VLADTAI G DL E + + K E + + ++DY+ A+LA
Sbjct: 64 YLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELA 123
Query: 122 IIIAQLKTIQ 131
IAQL+ I+
Sbjct: 124 KAIAQLRVIE 133
>sp|P0A6E6|ATPE_ECOLI ATP synthase epsilon chain OS=Escherichia coli (strain K12) GN=atpC
PE=1 SV=2
Length = 139
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 85/130 (65%), Gaps = 2/130 (1%)
Query: 2 RIDIVSIEGLLFSNKNIEFIVLPGELGDLGVYPLHSPLITCIKPGFIRIKISKKIEEKCI 61
+D+VS E +FS +E I + G G+LG+YP H+PL+T IKPG IRI + + E+ I
Sbjct: 6 HLDVVSAEQQMFSGL-VEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRI-VKQHGHEEFI 63
Query: 62 FVSGGIIDIQPDSVIVLADTAIHGSDLVEKQIEKEKILLENILYNKKSNIDYSITKAKLA 121
++SGGI+++QP +V VLADTAI G DL E + + K E + + ++DY+ A+LA
Sbjct: 64 YLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELA 123
Query: 122 IIIAQLKTIQ 131
IAQL+ I+
Sbjct: 124 KAIAQLRVIE 133
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.144 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,054,985
Number of Sequences: 539616
Number of extensions: 1920359
Number of successful extensions: 7113
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 628
Number of HSP's successfully gapped in prelim test: 115
Number of HSP's that attempted gapping in prelim test: 6046
Number of HSP's gapped (non-prelim): 753
length of query: 139
length of database: 191,569,459
effective HSP length: 104
effective length of query: 35
effective length of database: 135,449,395
effective search space: 4740728825
effective search space used: 4740728825
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)