RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy29
         (222 letters)



>d1q2ya_ d.108.1.1 (A:) Probable acetyltransferase YjcF {Bacillus
           subtilis [TaxId: 1423]}
          Length = 140

 Score = 25.2 bits (54), Expect = 4.9
 Identities = 9/18 (50%), Positives = 10/18 (55%)

Query: 75  KFGYSALDEDEFDEDGNP 92
           K GY  L E EF + G P
Sbjct: 116 KHGYRVLSEKEFLDAGIP 133


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.308    0.130    0.353 

Gapped
Lambda     K      H
   0.267   0.0523    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 801,759
Number of extensions: 36722
Number of successful extensions: 47
Number of sequences better than 10.0: 1
Number of HSP's gapped: 47
Number of HSP's successfully gapped: 3
Length of query: 222
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 140
Effective length of database: 1,281,736
Effective search space: 179443040
Effective search space used: 179443040
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 51 (23.9 bits)