Query psy2902
Match_columns 945
No_of_seqs 614 out of 4386
Neff 9.0
Searched_HMMs 29240
Date Fri Aug 16 20:33:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2902.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2902hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9q_A Chaperone protein DNAK; 100.0 2.3E-91 7.9E-96 831.0 65.4 572 70-644 1-572 (605)
2 2kho_A Heat shock protein 70; 100.0 3.1E-88 1.1E-92 804.2 54.9 572 70-644 1-572 (605)
3 1yuw_A Heat shock cognate 71 k 100.0 1.4E-84 4.9E-89 765.7 57.6 541 70-620 3-553 (554)
4 3d2f_A Heat shock protein homo 100.0 2.3E-84 7.8E-89 775.2 56.1 561 70-644 1-590 (675)
5 2v7y_A Chaperone protein DNAK; 100.0 1.4E-79 4.6E-84 718.3 55.4 509 70-610 1-509 (509)
6 3i33_A Heat shock-related 70 k 100.0 1.2E-56 4E-61 512.9 42.6 385 57-454 12-403 (404)
7 1dkg_D Molecular chaperone DNA 100.0 2E-56 6.7E-61 507.3 42.1 383 70-453 1-383 (383)
8 3qfu_A 78 kDa glucose-regulate 100.0 5.8E-55 2E-59 497.6 42.5 372 71-453 18-394 (394)
9 4gni_A Putative heat shock pro 100.0 1.1E-54 3.9E-59 496.8 39.8 370 72-453 14-402 (409)
10 1nlt_A Protein YDJ1, mitochond 100.0 2.9E-48 1E-52 404.1 21.6 230 686-917 8-248 (248)
11 3lz8_A Putative chaperone DNAJ 100.0 4.5E-44 1.5E-48 386.2 21.1 282 576-934 39-324 (329)
12 1jce_A ROD shape-determining p 100.0 8.5E-38 2.9E-42 348.6 25.4 315 70-453 2-327 (344)
13 3agx_A DNAJ homolog subfamily 100.0 2E-37 6.8E-42 306.4 19.7 176 689-920 2-179 (181)
14 2q2g_A HSP40 protein, heat sho 100.0 7.2E-36 2.5E-40 295.3 19.5 175 689-920 3-179 (180)
15 1c3g_A Heat shock protein 40; 100.0 3.6E-34 1.2E-38 280.4 14.9 168 690-917 1-170 (170)
16 4e81_A Chaperone protein DNAK; 100.0 2.8E-29 9.4E-34 255.4 19.5 183 460-644 2-184 (219)
17 3n8e_A Stress-70 protein, mito 100.0 1.2E-28 4.2E-33 241.8 18.0 165 456-620 17-181 (182)
18 3dob_A Heat shock 70 kDa prote 100.0 3E-27 1E-31 225.7 19.1 150 461-610 2-152 (152)
19 3h0x_A 78 kDa glucose-regulate 100.0 5E-27 1.7E-31 224.7 20.5 150 461-610 2-152 (152)
20 3dqg_A Heat shock 70 kDa prote 99.9 2E-27 6.8E-32 226.6 16.3 150 461-610 2-151 (151)
21 1u00_A HSC66, chaperone protei 99.9 2.5E-26 8.7E-31 236.4 20.3 181 462-644 1-181 (227)
22 2op6_A Heat shock 70 kDa prote 99.9 8E-25 2.7E-29 211.2 19.6 150 461-610 2-152 (152)
23 3h1q_A Ethanolamine utilizatio 99.9 7.6E-24 2.6E-28 227.7 23.9 205 180-449 68-272 (272)
24 2fsj_A Hypothetical protein TA 99.9 2E-25 6.8E-30 247.1 9.5 230 175-450 91-343 (346)
25 2ych_A Competence protein PILM 99.9 2.1E-24 7.1E-29 243.6 12.4 301 73-432 15-335 (377)
26 2fxu_A Alpha-actin-1, actin, a 99.9 2.3E-23 7.8E-28 234.1 16.4 297 73-451 7-349 (375)
27 3i38_A Putative chaperone DNAJ 99.9 1.7E-23 5.9E-28 187.4 12.1 103 826-934 2-104 (109)
28 1k8k_A ARP3, actin-like protei 99.9 5.2E-23 1.8E-27 235.1 17.4 308 73-451 7-387 (418)
29 4a2a_A Cell division protein F 99.9 2.9E-22 1E-26 226.3 21.4 199 217-451 167-393 (419)
30 1xao_A YDJ1, mitochondrial pro 99.8 3.9E-21 1.3E-25 176.0 10.6 93 830-922 1-98 (121)
31 1q5l_A Chaperone protein DNAK; 99.8 1.3E-20 4.4E-25 176.4 12.4 121 456-576 14-134 (135)
32 2zgy_A Plasmid segregation pro 99.8 8.2E-20 2.8E-24 200.6 9.4 225 178-449 73-319 (320)
33 1nlt_A Protein YDJ1, mitochond 99.8 4.5E-19 1.5E-23 184.3 9.7 151 683-839 9-247 (248)
34 1k8k_B ARP2, actin-like protei 99.7 3.7E-19 1.3E-23 200.8 4.7 298 73-450 8-363 (394)
35 4ehu_A Activator of 2-hydroxyi 99.7 1.2E-17 4.1E-22 179.4 11.2 189 229-453 68-256 (276)
36 2ctt_A DNAJ homolog subfamily 99.7 2.7E-17 9.4E-22 146.9 5.4 103 689-791 1-103 (104)
37 3js6_A Uncharacterized PARM pr 99.6 6.1E-15 2.1E-19 162.8 12.1 207 205-454 114-339 (355)
38 3qb0_A Actin-related protein 4 99.5 2E-13 6.8E-18 155.4 15.4 178 73-312 25-209 (498)
39 3dwl_A Actin-related protein 3 99.5 2.9E-14 9.8E-19 161.0 6.7 254 175-451 95-396 (427)
40 4apw_A ALP12; actin-like prote 99.4 1E-14 3.5E-19 159.9 -1.0 203 205-452 106-325 (329)
41 1exk_A DNAJ protein; extended 99.3 4.7E-12 1.6E-16 107.0 5.7 76 707-782 2-77 (79)
42 3ll3_A Gluconate kinase; xylul 99.2 2.1E-11 7.2E-16 141.6 10.9 208 224-457 219-446 (504)
43 4fo0_A Actin-related protein 8 99.1 5.9E-09 2E-13 124.3 27.4 111 189-313 177-294 (593)
44 3hz6_A Xylulokinase; xylulose, 99.1 6E-11 2.1E-15 138.0 8.7 216 224-458 223-457 (511)
45 2d0o_A DIOL dehydratase-reacti 99.1 9.1E-10 3.1E-14 121.7 16.1 200 217-450 367-603 (610)
46 3ifr_A Carbohydrate kinase, FG 99.1 5.3E-11 1.8E-15 138.3 6.1 213 224-457 225-453 (508)
47 1nbw_A Glycerol dehydratase re 99.1 9.3E-10 3.2E-14 122.2 15.4 197 219-449 371-604 (607)
48 3ezw_A Glycerol kinase; glycer 99.0 1.7E-10 5.7E-15 134.9 5.3 210 227-459 232-457 (526)
49 3i8b_A Xylulose kinase; strain 99.0 2.6E-10 9E-15 132.4 6.5 201 225-455 255-475 (515)
50 3agx_A DNAJ homolog subfamily 98.9 2.9E-09 9.9E-14 104.8 10.3 144 686-839 3-175 (181)
51 3l0q_A Xylulose kinase; xlylul 98.9 5.7E-09 2E-13 122.7 14.7 228 223-457 236-495 (554)
52 4e1j_A Glycerol kinase; struct 98.9 1E-09 3.5E-14 127.8 8.1 209 229-458 255-479 (520)
53 3h3n_X Glycerol kinase; ATP-bi 98.9 1.6E-09 5.6E-14 125.8 7.2 206 230-458 236-457 (506)
54 2p3r_A Glycerol kinase; glycer 98.9 9E-10 3.1E-14 128.0 4.5 205 230-457 234-454 (510)
55 3g25_A Glycerol kinase; IDP007 98.8 1.1E-09 3.9E-14 127.1 4.5 206 230-458 237-458 (501)
56 3i38_A Putative chaperone DNAJ 98.8 2.8E-09 9.4E-14 95.2 4.9 83 688-841 10-92 (109)
57 2zf5_O Glycerol kinase; hypert 98.8 2.1E-09 7.3E-14 124.7 5.0 203 230-456 229-445 (497)
58 3lz8_A Putative chaperone DNAJ 98.8 1.9E-09 6.4E-14 116.3 3.9 167 659-841 118-312 (329)
59 1xao_A YDJ1, mitochondrial pro 98.8 3.7E-09 1.3E-13 96.5 5.0 85 688-840 5-93 (121)
60 1hux_A Activator of (R)-2-hydr 98.8 2.2E-07 7.5E-12 98.4 19.5 72 377-452 186-257 (270)
61 2itm_A Xylulose kinase, xylulo 98.7 2E-08 7E-13 116.1 10.4 211 224-456 214-439 (484)
62 4bc3_A Xylulose kinase; transf 98.7 2E-07 6.7E-12 109.1 18.5 205 224-455 262-485 (538)
63 2d4w_A Glycerol kinase; alpha 98.6 2.6E-08 8.9E-13 115.7 6.9 202 232-456 237-455 (504)
64 2w40_A Glycerol kinase, putati 98.6 5.3E-08 1.8E-12 113.1 9.2 203 231-457 239-460 (503)
65 2dpn_A Glycerol kinase; thermu 98.6 6.5E-08 2.2E-12 112.2 8.8 202 230-455 232-449 (495)
66 2ctt_A DNAJ homolog subfamily 98.6 2.6E-08 9E-13 88.5 4.0 76 688-771 4-97 (104)
67 2q2g_A HSP40 protein, heat sho 98.5 9.9E-08 3.4E-12 93.8 6.0 73 767-839 82-175 (180)
68 1c3g_A Heat shock protein 40; 98.3 9.6E-07 3.3E-11 85.9 7.4 79 837-915 2-89 (170)
69 1exk_A DNAJ protein; extended 98.2 5.1E-07 1.7E-11 75.8 2.7 69 692-768 4-77 (79)
70 1bq0_A DNAJ, HSP40; chaperone, 98.1 6.8E-07 2.3E-11 79.2 2.4 89 576-675 14-102 (103)
71 3jvp_A Ribulokinase; PSI-II, N 98.0 1.3E-05 4.5E-10 94.3 11.4 217 224-454 254-490 (572)
72 2ews_A Pantothenate kinase; PA 98.0 0.0003 1E-08 74.0 19.9 75 370-449 207-286 (287)
73 4am6_A Actin-like protein ARP8 98.0 4.5E-05 1.5E-09 87.7 13.3 154 205-376 222-380 (655)
74 3lcz_A YCZA, inhibitor of trap 97.3 0.0001 3.5E-09 55.4 2.6 28 733-768 9-36 (53)
75 2bx9_A Anti-trap, AT, tryptoph 97.0 0.00035 1.2E-08 52.5 2.6 25 718-745 11-35 (53)
76 3lcz_A YCZA, inhibitor of trap 96.8 0.00045 1.5E-08 51.9 1.8 30 754-783 8-37 (53)
77 3vgl_A Glucokinase; ROK family 96.7 0.038 1.3E-06 59.6 17.3 46 229-276 95-140 (321)
78 2ch5_A NAGK protein; transfera 96.6 0.48 1.6E-05 51.4 25.9 62 203-271 70-134 (347)
79 3h6e_A Carbohydrate kinase, FG 96.6 0.0027 9.2E-08 72.6 7.9 98 347-452 333-436 (482)
80 2ivn_A O-sialoglycoprotein end 96.5 0.6 2.1E-05 50.2 25.3 64 385-453 231-300 (330)
81 2bx9_A Anti-trap, AT, tryptoph 96.5 0.00069 2.4E-08 50.9 1.3 29 733-769 9-37 (53)
82 2e2o_A Hexokinase; acetate and 96.5 0.21 7.3E-06 53.0 21.3 47 404-451 240-287 (299)
83 2uyt_A Rhamnulokinase; rhamnos 96.3 0.0057 1.9E-07 70.4 7.9 81 368-453 360-441 (489)
84 2i7n_A Pantothenate kinase 1; 96.2 0.012 4E-07 63.6 9.3 46 404-449 306-358 (360)
85 1t6c_A Exopolyphosphatase; alp 96.2 0.019 6.6E-07 61.5 11.1 78 220-306 100-177 (315)
86 2qm1_A Glucokinase; alpha-beta 96.2 0.17 6E-06 54.4 19.0 44 230-275 108-151 (326)
87 4db3_A Glcnac kinase, N-acetyl 96.2 0.21 7.1E-06 53.9 19.4 45 229-275 119-163 (327)
88 3r8e_A Hypothetical sugar kina 96.0 0.11 3.9E-06 55.8 16.2 46 228-275 115-161 (321)
89 3vov_A Glucokinase, hexokinase 96.0 0.2 7E-06 53.2 17.9 45 229-275 97-141 (302)
90 2dmx_A DNAJ homolog subfamily 95.8 0.0034 1.2E-07 53.9 2.1 64 576-649 20-83 (92)
91 4htl_A Beta-glucoside kinase; 95.8 0.3 1E-05 51.8 17.9 48 404-451 238-291 (297)
92 2ctr_A DNAJ homolog subfamily 95.7 0.0026 8.9E-08 54.1 1.1 62 576-649 18-79 (88)
93 2o37_A Protein SIS1; HSP40, J- 95.5 0.0059 2E-07 52.4 2.5 59 576-648 19-77 (92)
94 1hdj_A Human HSP40, HDJ-1; mol 95.4 0.0084 2.9E-07 49.5 3.0 60 576-647 14-73 (77)
95 2lgw_A DNAJ homolog subfamily 95.3 0.0055 1.9E-07 53.3 1.7 64 576-649 13-76 (99)
96 3pmq_A Decaheme cytochrome C M 95.2 0.0038 1.3E-07 72.5 0.5 74 693-766 168-257 (669)
97 2ap1_A Putative regulator prot 94.5 0.79 2.7E-05 49.2 16.7 44 230-275 120-163 (327)
98 3eno_A Putative O-sialoglycopr 94.3 5.1 0.00017 42.9 22.4 67 383-454 234-306 (334)
99 1z6r_A MLC protein; transcript 94.3 1.2 4E-05 49.5 18.0 44 230-275 186-229 (406)
100 2ej7_A HCG3 gene; HCG3 protein 94.1 0.019 6.6E-07 47.9 2.0 61 576-646 20-80 (82)
101 1zbs_A Hypothetical protein PG 94.0 0.82 2.8E-05 48.2 15.1 68 379-452 212-281 (291)
102 2gup_A ROK family protein; sug 93.8 1.7 5.9E-05 45.6 17.2 43 229-275 93-135 (292)
103 1z05_A Transcriptional regulat 93.7 1.2 4.2E-05 49.8 16.8 44 230-275 208-251 (429)
104 2hoe_A N-acetylglucosamine kin 93.6 2.6 9E-05 46.2 19.0 42 230-275 188-229 (380)
105 3apq_A DNAJ homolog subfamily 93.4 0.047 1.6E-06 54.8 3.9 64 576-650 13-76 (210)
106 2yua_A Williams-beuren syndrom 93.4 0.032 1.1E-06 48.5 2.2 55 576-641 28-82 (99)
107 2ctp_A DNAJ homolog subfamily 93.0 0.036 1.2E-06 45.7 1.9 58 576-645 18-75 (78)
108 2yhw_A Bifunctional UDP-N-acet 93.0 5.1 0.00017 43.1 19.8 44 230-275 131-174 (343)
109 2dn9_A DNAJ homolog subfamily 92.9 0.046 1.6E-06 45.2 2.4 59 576-645 18-76 (79)
110 1sz2_A Glucokinase, glucose ki 92.9 11 0.00036 40.3 22.1 43 228-270 99-151 (332)
111 2ctq_A DNAJ homolog subfamily 92.2 0.043 1.5E-06 48.8 1.4 61 576-647 31-91 (112)
112 2cug_A Mkiaa0962 protein; DNAJ 92.2 0.051 1.7E-06 46.0 1.8 57 576-644 28-84 (88)
113 2och_A Hypothetical protein DN 91.4 0.12 4.1E-06 41.9 3.2 54 576-643 19-72 (73)
114 2ctw_A DNAJ homolog subfamily 91.0 0.061 2.1E-06 47.6 1.0 61 576-647 28-88 (109)
115 2qsa_A DNAJ homolog DNJ-2; J-d 90.6 0.2 6.7E-06 44.3 4.1 59 577-643 28-86 (109)
116 1zc6_A Probable N-acetylglucos 90.6 19 0.00063 37.8 27.0 63 379-450 228-292 (305)
117 3mdq_A Exopolyphosphatase; str 88.2 1.3 4.5E-05 47.2 9.0 78 220-306 92-170 (315)
118 2pf4_E Small T antigen; PP2A, 87.5 0.12 3.9E-06 49.6 0.2 50 579-643 27-76 (174)
119 3cet_A Conserved archaeal prot 87.3 1.9 6.5E-05 45.5 9.3 41 233-277 106-146 (334)
120 3en9_A Glycoprotease, O-sialog 86.9 8.3 0.00028 44.4 15.6 184 203-427 72-272 (540)
121 3cer_A Possible exopolyphospha 85.0 1.8 6.2E-05 46.6 8.0 83 221-306 106-191 (343)
122 1wjz_A 1700030A21RIK protein; 84.9 0.28 9.5E-06 41.9 1.2 62 576-642 27-88 (94)
123 1u6z_A Exopolyphosphatase; alp 83.7 2.5 8.4E-05 48.4 8.9 111 183-306 60-176 (513)
124 3apo_A DNAJ homolog subfamily 82.5 0.34 1.2E-05 59.1 1.1 63 576-649 32-94 (780)
125 3bex_A Type III pantothenate k 82.2 4.7 0.00016 41.2 9.4 19 73-91 5-23 (249)
126 2yhx_A Hexokinase B; transfera 80.5 1.4 4.6E-05 49.5 5.0 56 218-277 164-221 (457)
127 3uo3_A J-type CO-chaperone JAC 80.4 0.41 1.4E-05 46.3 0.6 54 575-642 28-81 (181)
128 3o8m_A Hexokinase; rnaseh-like 79.9 1.1 3.8E-05 50.4 4.0 59 216-278 184-244 (485)
129 3hi0_A Putative exopolyphospha 79.6 2.8 9.7E-05 47.8 7.4 76 220-305 103-178 (508)
130 3bvo_A CO-chaperone protein HS 78.8 0.46 1.6E-05 47.1 0.4 59 576-640 56-114 (207)
131 3lof_A Heat shock 70 kDa prote 77.9 0.52 1.8E-05 41.8 0.5 47 598-644 3-49 (113)
132 3hho_A CO-chaperone protein HS 77.1 1.1 3.6E-05 43.2 2.4 60 576-641 17-76 (174)
133 3epq_A Putative fructokinase; 76.6 8.2 0.00028 40.6 9.5 44 230-275 97-140 (302)
134 1fpo_A HSC20, chaperone protei 75.2 0.88 3E-05 43.6 1.2 62 575-642 13-74 (171)
135 4g9i_A Hydrogenase maturation 72.9 8.7 0.0003 46.0 9.3 61 387-452 694-760 (772)
136 1faf_A Large T antigen; J doma 72.2 1.2 4E-05 36.6 1.1 46 577-637 25-70 (79)
137 3zx3_A Ectonucleoside triphosp 72.0 16 0.00055 40.5 10.6 43 234-276 151-199 (452)
138 3h6e_A Carbohydrate kinase, FG 71.9 1.9 6.5E-05 48.9 3.2 22 70-91 5-26 (482)
139 2aa4_A Mannac kinase, putative 70.1 22 0.00075 36.8 10.9 47 404-450 234-287 (289)
140 1woq_A Inorganic polyphosphate 67.9 46 0.0016 33.9 12.7 44 230-275 114-158 (267)
141 1bdg_A Hexokinase; phosphotran 67.7 5.1 0.00017 44.8 5.4 57 216-276 171-229 (451)
142 3mcp_A Glucokinase; structural 66.5 21 0.00071 38.6 9.9 45 229-275 107-164 (366)
143 3qbx_A Anhydro-N-acetylmuramic 65.3 12 0.00041 40.1 7.5 72 377-451 260-336 (371)
144 2l6l_A DNAJ homolog subfamily 64.6 3.7 0.00013 38.5 3.0 62 576-642 21-82 (155)
145 1iv0_A Hypothetical protein; r 64.5 4.6 0.00016 34.5 3.3 18 73-90 3-20 (98)
146 3jvp_A Ribulokinase; PSI-II, N 64.1 4 0.00014 47.4 3.8 20 71-90 5-24 (572)
147 1nu0_A Hypothetical protein YQ 63.5 6.5 0.00022 36.0 4.3 22 71-92 3-24 (138)
148 3ttc_A HYPF, transcriptional r 63.0 13 0.00043 43.4 7.6 62 385-451 586-651 (657)
149 1ltl_A DNA replication initiat 62.9 5.9 0.0002 41.2 4.5 16 907-922 255-270 (279)
150 3hm8_A Hexokinase-3; glucose, 60.8 64 0.0022 35.6 12.4 58 216-277 159-219 (445)
151 2uyt_A Rhamnulokinase; rhamnos 60.2 3.5 0.00012 46.9 2.4 21 70-90 3-23 (489)
152 3aap_A Ectonucleoside triphosp 59.3 6.9 0.00024 42.2 4.4 19 257-275 139-157 (353)
153 3cqy_A Anhydro-N-acetylmuramic 57.5 16 0.00054 39.3 6.6 71 377-451 267-342 (370)
154 3vth_A Hydrogenase maturation 57.5 17 0.0006 43.2 7.7 51 404-454 694-750 (761)
155 2p32_A Heat shock 70 kDa prote 57.4 1.1 3.6E-05 40.3 -2.1 46 599-644 13-58 (120)
156 1gh6_A Large T antigen; tumor 56.3 1.8 6.3E-05 38.2 -0.7 50 579-643 24-73 (114)
157 1cza_N Hexokinase type I; stru 54.1 10 0.00034 46.6 5.1 57 216-276 630-689 (917)
158 3ven_A O-carbamoyltransferase 53.3 19 0.00065 41.2 6.8 78 372-454 280-360 (576)
159 3ag7_A Putative uncharacterize 53.1 4.3 0.00015 35.3 1.2 53 577-633 52-104 (106)
160 2ys8_A RAB-related GTP-binding 53.1 2.7 9.2E-05 35.3 -0.1 49 576-636 38-86 (90)
161 3f9m_A Glucokinase; hexokinase 53.0 16 0.00054 40.8 5.9 58 216-277 183-243 (470)
162 3djc_A Type III pantothenate k 52.8 8 0.00027 39.8 3.3 22 70-91 1-22 (266)
163 1n4c_A Auxilin; four helix bun 52.4 1.7 5.8E-05 41.8 -1.7 55 576-638 128-182 (182)
164 1ud0_A HSC70, 70 kDa heat-shoc 52.0 2.2 7.4E-05 37.7 -1.0 42 602-643 2-43 (113)
165 1cza_N Hexokinase type I; stru 51.7 16 0.00053 44.9 6.2 57 216-276 182-241 (917)
166 3nyb_B Protein AIR2; polya RNA 50.4 9.5 0.00032 31.4 2.7 58 716-774 5-64 (83)
167 1vhx_A Putative holliday junct 50.0 8.6 0.00029 35.7 2.8 19 72-90 4-22 (150)
168 2qkd_A Zinc finger protein ZPR 49.5 17 0.00057 39.5 5.3 23 783-805 298-320 (404)
169 1saz_A Probable butyrate kinas 38.0 24 0.00081 38.4 4.4 48 403-450 295-347 (381)
170 2aa4_A Mannac kinase, putative 36.8 37 0.0013 35.0 5.6 43 230-275 96-138 (289)
171 3cj1_A Ectonucleoside triphosp 36.7 26 0.00088 39.1 4.4 20 257-276 189-208 (456)
172 2guz_A Mitochondrial import in 36.6 6.5 0.00022 31.3 -0.3 44 576-634 26-69 (71)
173 2qkd_A Zinc finger protein ZPR 35.3 20 0.00068 38.9 3.1 24 782-805 89-112 (404)
174 1iur_A KIAA0730 protein; DNAJ 35.2 5.9 0.0002 33.1 -0.8 51 575-635 26-76 (88)
175 1hjr_A Holliday junction resol 34.0 41 0.0014 31.4 4.7 17 73-89 3-19 (158)
176 2apo_B Ribosome biogenesis pro 33.6 18 0.00061 27.6 1.7 14 752-765 15-28 (60)
177 4ep4_A Crossover junction endo 33.5 26 0.00088 33.0 3.2 19 72-90 2-20 (166)
178 2aus_D NOP10, ribosome biogene 33.3 18 0.00063 27.5 1.7 15 752-766 14-28 (60)
179 1nbw_A Glycerol dehydratase re 31.9 24 0.00083 39.8 3.1 31 206-236 132-162 (607)
180 1msz_A DNA-binding protein smu 30.8 29 0.00098 28.6 2.6 23 901-923 35-57 (86)
181 2qwo_B Putative tyrosine-prote 30.7 13 0.00043 31.3 0.5 48 576-631 44-91 (92)
182 1zxo_A Conserved hypothetical 30.2 16 0.00055 38.0 1.3 46 403-450 232-277 (291)
183 2h3g_X Biosynthetic protein; p 28.8 35 0.0012 35.0 3.6 20 73-92 2-21 (268)
184 2q2r_A Glucokinase 1, putative 24.1 41 0.0014 36.3 3.3 21 70-90 28-48 (373)
185 1zxo_A Conserved hypothetical 23.6 34 0.0012 35.5 2.4 59 204-269 58-118 (291)
186 1msz_A DNA-binding protein smu 23.4 59 0.002 26.7 3.2 28 207-234 34-61 (86)
187 2vf7_A UVRA2, excinuclease ABC 23.1 33 0.0011 41.4 2.4 32 735-766 640-672 (842)
188 2bl6_A Nucleocapsid protein P1 22.4 62 0.0021 21.6 2.7 27 718-744 2-30 (37)
189 3htv_A D-allose kinase, alloki 22.3 1.3E+02 0.0046 31.2 6.8 48 403-450 239-298 (310)
190 3epq_A Putative fructokinase; 21.3 1.7E+02 0.0059 30.2 7.4 19 73-91 5-23 (302)
191 1saz_A Probable butyrate kinas 21.3 90 0.0031 33.7 5.3 22 70-91 1-22 (381)
192 3h0g_L DNA-directed RNA polyme 21.3 60 0.0021 25.0 2.7 25 698-722 20-44 (63)
No 1
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=2.3e-91 Score=831.03 Aligned_cols=572 Identities=69% Similarity=1.084 Sum_probs=547.1
Q ss_pred CCceEEEEcCccceEEEEEeCCceEEEeCCCCCcCccEEEEEeeCCcEEecHHHHHhhhhCCCchhHHHHHhhCCCCCcH
Q psy2902 70 MSKIIGIDLGTTNSCVSIIEGSQPKVIENSEGARTTPSVIAYQENGEILVGAPAKRQAVTNPKNTIYAAKRLIGRKFNEK 149 (945)
Q Consensus 70 m~~viGID~GTt~s~va~~~~~~~~ii~~~~g~~~~Ps~v~~~~~~~~~~G~~A~~~~~~~~~~~i~~~k~llg~~~~~~ 149 (945)
|+++||||||||||+||++.++.++++.|..|++.+||+|+|++++++++|..|..+...+|.++++++||+||++++++
T Consensus 1 M~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 80 (605)
T 4b9q_A 1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDE 80 (605)
T ss_dssp -CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSH
T ss_pred CCcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCH
Confidence 67799999999999999999999999999999999999999987789999999999999999999999999999999999
Q ss_pred HHHhhhcCCCeeEEecCCCceEEEECCeeeChhhHHHHHHHHHHHHHHHHhCCCCCcEEEEcCCCCCHHHHHHHHHHHHH
Q psy2902 150 EVQKDISLMPYKIVKADNGDAWISVRGKKLAPPQISAEVLRKMKKTAEDYLGGEITEAVITVPAYFNDAQRQATKDAGRI 229 (945)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~~ 229 (945)
.++...+.+||+++...++.+.+.+.+..++|+++++++|++|++.|+.+++..+.++|||||++|++.||+++++|++.
T Consensus 81 ~v~~~~~~~p~~~~~~~~g~~~~~~~~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~Aa~~ 160 (605)
T 4b9q_A 81 EVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRI 160 (605)
T ss_dssp HHHHHHTTCSSEEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEEcCCCceEEEECCEEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEecCCCCCchHHHHHHHHHH
Q psy2902 230 AGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRIIDY 309 (945)
Q Consensus 230 AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~~~lGG~~iD~~l~~~ 309 (945)
|||+++++++||+|||++|+.... ..+..+||||+||||+|++++++......+.++++++.++..+||.+||..|++|
T Consensus 161 AGl~v~~li~EP~AAAlaygl~~~-~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~ 239 (605)
T 4b9q_A 161 AGLEVKRIINEPTAAALAYGLDKG-TGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINY 239 (605)
T ss_dssp TTCEEEEEEEHHHHHHHHHHTTSC-CSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred cCCceEEEeCcHHHHHHHhhhhcc-CCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHH
Confidence 999999999999999999988764 3578999999999999999999976556689999999999999999999999999
Q ss_pred HHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeeccCCCCeEEEEEEcHHHHHHHHHHHHHHHHHH
Q psy2902 310 ILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSNGAPVHLNLKITRAKLELLVDELITRTIEP 389 (945)
Q Consensus 310 l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~~~i~~i~~~ 389 (945)
+.++|...++.+...+++++.+|+.+||++|+.||......+.++.+..+..++.++.+.+||++|++++.++++++..+
T Consensus 240 l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i~~~ 319 (605)
T 4b9q_A 240 LVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEP 319 (605)
T ss_dssp HHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHHTTHH
T ss_pred HHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCCeEEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988776656678899999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHhCCCCCCCCCCCchhhhhHHHhhhhccCCCCceEEEeecccee
Q psy2902 390 CRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRDINPDEAVAVGAAIQGSVLSGDRKDLLLLDVTPLSL 469 (945)
Q Consensus 390 i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~~~~~~~p~~avA~GAa~~a~~~~~~~~~~~~~~~~~~s~ 469 (945)
+.++|+.+++...+|+.|+||||+|++|+|+++|++.||.++....||++|||+|||++|+.+++..+++++.|++|++|
T Consensus 320 v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a~~l~~~~~~~~l~dv~p~sl 399 (605)
T 4b9q_A 320 LKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSL 399 (605)
T ss_dssp HHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHHHHHHTSSCSEEEECBCSSCE
T ss_pred HHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHHHHhcCCCCceEEEeeeeeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999889999999999999
Q ss_pred eEEEeCCEEEEEEecCCCccceeEEEeeecCCCCceEEEEEEecCcccccCCceEEEEEEcCCCCCCCCcCeEEEEEEEC
Q psy2902 470 GIETMGGIMTKMIKKNTTIPTKFSQVFSTAEDNQPAVTVKVYQGEREMVSGNKILGEFNLEGIPPALRGIPQIEVTFDID 549 (945)
Q Consensus 470 gi~~~~~~~~~li~~~~~iP~~~~~~~~~~~d~q~~~~i~iy~g~~~~~~~~~~lg~~~i~~~~~~~~~~~~i~v~~~~d 549 (945)
||++.+|.|.+||++|++||++++++|++..|+|+.+.|.||||++..+.+|..||+|.|.++|+.|+|.++|+|+|++|
T Consensus 400 gie~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id 479 (605)
T 4b9q_A 400 GIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDID 479 (605)
T ss_dssp EEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTCCCEEEEEEEC
T ss_pred EEEEcCCEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCCCcCCCceEEEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccEEEEEeecCCCceeEEEeccCCCCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhcc
Q psy2902 550 ANGILHVTAKDKKTGKENKITIKANSGLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVL 629 (945)
Q Consensus 550 ~~g~l~v~a~~~~~g~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l 629 (945)
.||+|+|+|.+..||++.+++|+.+.+||++||++|+++++++..+|+..+++.+++|.+|++++.+++.++ ++.+.+
T Consensus 480 ~~gil~v~a~~~~tg~~~~i~i~~~~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~~~--~~~~~~ 557 (605)
T 4b9q_A 480 ADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKCEELVQTRNQGDHLLHSTRKQVE--EAGDKL 557 (605)
T ss_dssp TTSCEEEEEEETTTCCEECCEEESCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHGGGS
T ss_pred CCcEEEEEEEecCCCcEEEEEecCCCCCCHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHH--hhhhhC
Confidence 999999999999999999999998889999999999999999999999999999999999999999998886 577889
Q ss_pred ChhHHHHHHHHhccc
Q psy2902 630 SDSEKRIIYDQYGHA 644 (945)
Q Consensus 630 ~~~~k~~~~d~~~~~ 644 (945)
+++++.++.+.+.+.
T Consensus 558 ~~~~~~~~~~~~~~~ 572 (605)
T 4b9q_A 558 PADDKTAIESALTAL 572 (605)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999988877653
No 2
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=3.1e-88 Score=804.15 Aligned_cols=572 Identities=69% Similarity=1.090 Sum_probs=536.9
Q ss_pred CCceEEEEcCccceEEEEEeCCceEEEeCCCCCcCccEEEEEeeCCcEEecHHHHHhhhhCCCchhHHHHHhhCCCCCcH
Q psy2902 70 MSKIIGIDLGTTNSCVSIIEGSQPKVIENSEGARTTPSVIAYQENGEILVGAPAKRQAVTNPKNTIYAAKRLIGRKFNEK 149 (945)
Q Consensus 70 m~~viGID~GTt~s~va~~~~~~~~ii~~~~g~~~~Ps~v~~~~~~~~~~G~~A~~~~~~~~~~~i~~~k~llg~~~~~~ 149 (945)
|+.+||||||||||+||++.+|.++++.|+.|++.+||+|+|+.+++++||..|..+...+|.++++++|+++|++++++
T Consensus 1 m~~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~ 80 (605)
T 2kho_A 1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDE 80 (605)
T ss_dssp ---CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSST
T ss_pred CCCEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcH
Confidence 55689999999999999999999999999999999999999987788999999999999999999999999999999999
Q ss_pred HHHhhhcCCCeeEEecCCCceEEEECCeeeChhhHHHHHHHHHHHHHHHHhCCCCCcEEEEcCCCCCHHHHHHHHHHHHH
Q psy2902 150 EVQKDISLMPYKIVKADNGDAWISVRGKKLAPPQISAEVLRKMKKTAEDYLGGEITEAVITVPAYFNDAQRQATKDAGRI 229 (945)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~~ 229 (945)
+++.+.+.+||+++...++.+.+.+.+..++|+++++++|++|++.|+.+++..+.++|||||++|++.||+++++|++.
T Consensus 81 ~v~~~~~~~p~~~~~~~~g~~~i~~~g~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A~~~ 160 (605)
T 2kho_A 81 EVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRI 160 (605)
T ss_dssp THHHHHHHCSSCEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHHHHT
T ss_pred HHHHHhhcCCeEEEECCCCceEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHHHHH
Confidence 99988889999998888889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEecCCCCCchHHHHHHHHHH
Q psy2902 230 AGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRIIDY 309 (945)
Q Consensus 230 AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~~~lGG~~iD~~l~~~ 309 (945)
|||+++++++||+|||++|+.... ..+..+||||+||||+|++++++.....++.++++++.++..+||.+||..|++|
T Consensus 161 AGl~v~~li~EP~AAAlay~l~~~-~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~~~ 239 (605)
T 2kho_A 161 AGLEVKRIINEPTAAALAYGLDKG-TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINY 239 (605)
T ss_dssp TTCEEEEEEEHHHHHHHHTTTTSS-SSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHHHHH
T ss_pred cCCceEEEecCHHHHHHHhhhccc-CCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHHHHH
Confidence 999999999999999999988763 2578899999999999999999854333688999999999999999999999999
Q ss_pred HHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeeccCCCCeEEEEEEcHHHHHHHHHHHHHHHHHH
Q psy2902 310 ILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSNGAPVHLNLKITRAKLELLVDELITRTIEP 389 (945)
Q Consensus 310 l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~~~i~~i~~~ 389 (945)
+.++|.++++.++..+++++.+|+.+||++|+.||......+.++.+..+..++.++.+.+||++|+++++++++++..+
T Consensus 240 l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~ 319 (605)
T 2kho_A 240 LVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEP 319 (605)
T ss_dssp HHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGGGTSH
T ss_pred HHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHHHHHHHHHHHHHHHH
Confidence 99999999998888899999999999999999999998888998877654333457788999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHhCCCCCCCCCCCchhhhhHHHhhhhccCCCCceEEEeecccee
Q psy2902 390 CRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRDINPDEAVAVGAAIQGSVLSGDRKDLLLLDVTPLSL 469 (945)
Q Consensus 390 i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~~~~~~~p~~avA~GAa~~a~~~~~~~~~~~~~~~~~~s~ 469 (945)
+.++|+.+++...+|+.|+||||+|++|+|++.|++.||.++....||++|||+|||++|+.+++..+++++.|++|++|
T Consensus 320 i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a~~l~~~~~~~~l~dv~p~sl 399 (605)
T 2kho_A 320 LKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLLDVTPLSL 399 (605)
T ss_dssp HHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHHTTTTTSCCCCCCSBCCCCCE
T ss_pred HHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHHHHhcCCccCceEEeeeeeec
Confidence 99999999998889999999999999999999999999998888999999999999999999998888999999999999
Q ss_pred eEEEeCCEEEEEEecCCCccceeEEEeeecCCCCceEEEEEEecCcccccCCceEEEEEEcCCCCCCCCcCeEEEEEEEC
Q psy2902 470 GIETMGGIMTKMIKKNTTIPTKFSQVFSTAEDNQPAVTVKVYQGEREMVSGNKILGEFNLEGIPPALRGIPQIEVTFDID 549 (945)
Q Consensus 470 gi~~~~~~~~~li~~~~~iP~~~~~~~~~~~d~q~~~~i~iy~g~~~~~~~~~~lg~~~i~~~~~~~~~~~~i~v~~~~d 549 (945)
|+++.+|.|.+||++|++||++++.+|++..|+|+.+.|.||+|++..+.+|..||++.|+++|+.|+|.++|+|+|++|
T Consensus 400 gi~~~~g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i~v~f~id 479 (605)
T 2kho_A 400 GIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDID 479 (605)
T ss_dssp EEEETTTEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCSCCTTCSCEEEEEEEC
T ss_pred cccccCCceEEEEecccccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEecCCCCCCCCCcEEEEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccEEEEEeecCCCceeEEEeccCCCCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhcc
Q psy2902 550 ANGILHVTAKDKKTGKENKITIKANSGLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVL 629 (945)
Q Consensus 550 ~~g~l~v~a~~~~~g~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l 629 (945)
.||+|+|++.+..||+..+++|+.+.+||++||++|+++++++..+|+..+++.+++|.+|++++.+++.+. ++.+.+
T Consensus 480 ~~gil~v~a~~~~tg~~~~i~i~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~l~--~~~~~~ 557 (605)
T 2kho_A 480 ADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFDELVQTRNQGDHLLHSTRKQVE--EAGDKL 557 (605)
T ss_dssp TTSCEEEEEEETTTCCEEEEEECTTSSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHGGGS
T ss_pred CCCceeEEEEEcCCCceeecccccccCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH--hhhccC
Confidence 999999999999999999999998889999999999999999999999999999999999999999999886 477889
Q ss_pred ChhHHHHHHHHhccc
Q psy2902 630 SDSEKRIIYDQYGHA 644 (945)
Q Consensus 630 ~~~~k~~~~d~~~~~ 644 (945)
+++++.++.+.+.+.
T Consensus 558 ~~~~~~~i~~~~~~~ 572 (605)
T 2kho_A 558 PADDKTAIESALTAL 572 (605)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999998887654
No 3
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=1.4e-84 Score=765.71 Aligned_cols=541 Identities=53% Similarity=0.839 Sum_probs=505.2
Q ss_pred CCceEEEEcCccceEEEEEeCCceEEEeCCCCCcCccEEEEEeeCCcEEecHHHHHhhhhCCCchhHHHHHhhCCCCCcH
Q psy2902 70 MSKIIGIDLGTTNSCVSIIEGSQPKVIENSEGARTTPSVIAYQENGEILVGAPAKRQAVTNPKNTIYAAKRLIGRKFNEK 149 (945)
Q Consensus 70 m~~viGID~GTt~s~va~~~~~~~~ii~~~~g~~~~Ps~v~~~~~~~~~~G~~A~~~~~~~~~~~i~~~k~llg~~~~~~ 149 (945)
|+.+||||||||||+||++.++.++++.++.|++.+||+|+|+++ .++||.+|..+...+|.++++++||+||++++++
T Consensus 3 m~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~-~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 81 (554)
T 1yuw_A 3 KGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDA 81 (554)
T ss_dssp SCCCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSS-CEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCS
T ss_pred CCCEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCC-cEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcH
Confidence 456899999999999999999999999999999999999999865 7899999999999999999999999999999999
Q ss_pred HHHhhhcCCCeeEEecCCCceEEEE--CC--eeeChhhHHHHHHHHHHHHHHHHhCCCCCcEEEEcCCCCCHHHHHHHHH
Q psy2902 150 EVQKDISLMPYKIVKADNGDAWISV--RG--KKLAPPQISAEVLRKMKKTAEDYLGGEITEAVITVPAYFNDAQRQATKD 225 (945)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~ 225 (945)
.++...+.+||.++.. ++...+.+ .+ ..++|+++++++|++|++.|+.+++..+.++|||||++|++.||+++++
T Consensus 82 ~v~~~~~~~p~~v~~~-~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~~ 160 (554)
T 1yuw_A 82 VVQSDMKHWPFMVVND-AGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKD 160 (554)
T ss_dssp HHHHHHTTCSSEEEEE-TTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEec-CCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHH
Confidence 9999999999998853 55555554 34 6899999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEecCCCCCchHHHHHH
Q psy2902 226 AGRIAGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQR 305 (945)
Q Consensus 226 Aa~~AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~~~lGG~~iD~~ 305 (945)
|++.|||+++++++||+|||++|+.......+..+||||+||||+|++++++ .++.++++++.++..+||.+||..
T Consensus 161 A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~----~~g~~~v~a~~g~~~lGG~d~d~~ 236 (554)
T 1yuw_A 161 AGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTI----AAGIFEVKSTAGDTHLGGEDFDNR 236 (554)
T ss_dssp HHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEE----ETTEEEEEEEEEETTCSHHHHHHH
T ss_pred HHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEE----cCCcEEEEEEeCCCCCCHHHHHHH
Confidence 9999999999999999999999988764345789999999999999999998 567899999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeeccCCCCeEEEEEEcHHHHHHHHHHHHHH
Q psy2902 306 IIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSNGAPVHLNLKITRAKLELLVDELITR 385 (945)
Q Consensus 306 l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~~~i~~ 385 (945)
|++|+.++|.++++.++..+++++.+|+.+||++|+.|+......+.++.+..+ .++...++|++|++++.+++++
T Consensus 237 l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g----~~~~~~ltr~~~e~l~~~~~~~ 312 (554)
T 1yuw_A 237 MVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG----IDFYTSITRARFEELNADLFRG 312 (554)
T ss_dssp HHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSS----CCEEEEEEHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCC----ceEEEEEEHHHHHHHHHHHHHH
Confidence 999999999999988888899999999999999999999998888888765443 2678999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHhC-CCCCCCCCCCchhhhhHHHhhhhccCC----CCceE
Q psy2902 386 TIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFG-KDPRRDINPDEAVAVGAAIQGSVLSGD----RKDLL 460 (945)
Q Consensus 386 i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg-~~~~~~~~p~~avA~GAa~~a~~~~~~----~~~~~ 460 (945)
+...+.++|+.+++...+|+.|+||||+|++|+|++.|++.|+ .++....||++|||+|||++|+.+++. .++++
T Consensus 313 i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~ 392 (554)
T 1yuw_A 313 TLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLL 392 (554)
T ss_dssp TTHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSC
T ss_pred HHHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceE
Confidence 9999999999999988899999999999999999999999995 777888999999999999999998874 57889
Q ss_pred EEeeccceeeEEEeCCEEEEEEecCCCccceeEEEeeecCCCCceEEEEEEecCcccccCCceEEEEEEcCCCCCCCCcC
Q psy2902 461 LLDVTPLSLGIETMGGIMTKMIKKNTTIPTKFSQVFSTAEDNQPAVTVKVYQGEREMVSGNKILGEFNLEGIPPALRGIP 540 (945)
Q Consensus 461 ~~~~~~~s~gi~~~~~~~~~li~~~~~iP~~~~~~~~~~~d~q~~~~i~iy~g~~~~~~~~~~lg~~~i~~~~~~~~~~~ 540 (945)
+.|++|++|||++.+|.+.+||++|++||++++++|++..|+|+.+.|.||+|++....+|..||++.|+++|+.|.|.+
T Consensus 393 ~~dv~p~slgi~~~~g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~ 472 (554)
T 1yuw_A 393 LLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVP 472 (554)
T ss_dssp CCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCSTTCC
T ss_pred EEEeeeeEEEEEecCceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEECCCccEEEEEeecCCCceeEEEeccC-CCCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccch
Q psy2902 541 QIEVTFDIDANGILHVTAKDKKTGKENKITIKAN-SGLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKS 619 (945)
Q Consensus 541 ~i~v~~~~d~~g~l~v~a~~~~~g~~~~~~i~~~-~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~ 619 (945)
+|+|+|++|.||+|+|++.+..+|+..+++|+.+ ..||++||++++++++++..+|+..+++.+++|.+|+++|++++.
T Consensus 473 ~i~v~f~id~~gil~v~a~~~~tg~~~~~~i~~~~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n~~e~~~~~~~~~ 552 (554)
T 1yuw_A 473 QIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKAT 552 (554)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCCEEEEEECCCSSCSCHHHHHHHHHHHHHTTTHHHHHTTSSCSCEECSSCCSCSCCC
T ss_pred EEEEEEEEccCceEEEEEEeccCCCceeEEEecCCCCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999876 469999999999999999999999999999999999999998876
Q ss_pred h
Q psy2902 620 L 620 (945)
Q Consensus 620 ~ 620 (945)
+
T Consensus 553 l 553 (554)
T 1yuw_A 553 V 553 (554)
T ss_dssp C
T ss_pred h
Confidence 5
No 4
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=2.3e-84 Score=775.16 Aligned_cols=561 Identities=26% Similarity=0.430 Sum_probs=515.6
Q ss_pred CCceEEEEcCccceEEEEEeCCceEEEeCCCCCcCccEEEEEeeCCcEEecHHHHHhhhhCCCchhHHHHHhhCCCCCcH
Q psy2902 70 MSKIIGIDLGTTNSCVSIIEGSQPKVIENSEGARTTPSVIAYQENGEILVGAPAKRQAVTNPKNTIYAAKRLIGRKFNEK 149 (945)
Q Consensus 70 m~~viGID~GTt~s~va~~~~~~~~ii~~~~g~~~~Ps~v~~~~~~~~~~G~~A~~~~~~~~~~~i~~~k~llg~~~~~~ 149 (945)
|+.+||||||||||+||++.++.++++.|..|++.+||+|+|+++ +++||..|..+...+|.++++++||+||+.++++
T Consensus 1 Mm~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~-~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 79 (675)
T 3d2f_A 1 MSTPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPK-NRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHP 79 (675)
T ss_dssp -CCCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSS-SEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCT
T ss_pred CCcEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCC-cEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcH
Confidence 566899999999999999999999999999999999999999764 7899999999999999999999999999999999
Q ss_pred HHHhhhcCCCeeEEecCCCceEEEEC--C--eeeChhhHHHHHHHHHHHHHHHHhCCCCCcEEEEcCCCCCHHHHHHHHH
Q psy2902 150 EVQKDISLMPYKIVKADNGDAWISVR--G--KKLAPPQISAEVLRKMKKTAEDYLGGEITEAVITVPAYFNDAQRQATKD 225 (945)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~ 225 (945)
.++.+.+++||+++...++.+.+.+. + ..++|+++++++|++|++.|+.+++..+.++|||||++|++.||+++++
T Consensus 80 ~v~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~ 159 (675)
T 3d2f_A 80 DFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIAD 159 (675)
T ss_dssp THHHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHH
Confidence 99999999999999887888777653 4 5799999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCccceecchhHHHHHHhccCCC-C----CCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEecCCCCCchH
Q psy2902 226 AGRIAGLEVKRIINEPTAAALAFGLDKS-G----KSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGE 300 (945)
Q Consensus 226 Aa~~AGl~~v~li~Ep~AAAl~~~~~~~-~----~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~~~lGG~ 300 (945)
|++.|||+++++++||+|||++|+.... . ..+..+||||+||||+|++++++ .++.++++++.++..+||.
T Consensus 160 Aa~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~----~~g~~~V~a~~gd~~lGG~ 235 (675)
T 3d2f_A 160 AARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAF----KKGQLKVLGTACDKHFGGR 235 (675)
T ss_dssp HHHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEE----ETTEEEEEEEEEETTCSHH
T ss_pred HHHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEe----cCCeEEEEEEcCCCCccHH
Confidence 9999999999999999999999987542 1 35688999999999999999998 5678999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeeccCCCCeEEEEEEcHHHHHHHHH
Q psy2902 301 DFDQRIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSNGAPVHLNLKITRAKLELLVD 380 (945)
Q Consensus 301 ~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~ 380 (945)
+||..|++|+.++|.++++.++..+++++.+|+.+||++|+.||....+.+.++.+..+. ++.+.|||++|++++.
T Consensus 236 d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~----~~~~~itr~~fe~l~~ 311 (675)
T 3d2f_A 236 DFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDV----DVSSQLSREELEELVK 311 (675)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSC----CEEEEEEHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCc----eEEEEEeHHHHHHHHH
Confidence 999999999999999999999889999999999999999999999888888887654432 7789999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHhCCCCCCCCCCCchhhhhHHHhhhhccCC--CCc
Q psy2902 381 ELITRTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRDINPDEAVAVGAAIQGSVLSGD--RKD 458 (945)
Q Consensus 381 ~~i~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~~~~~~~p~~avA~GAa~~a~~~~~~--~~~ 458 (945)
++++++..++.++|+.+++...+|+.|+||||+|++|+|++.|++.||.++....||++|||+|||++|+.+++. .++
T Consensus 312 ~l~~~i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~~ls~~~~v~~ 391 (675)
T 3d2f_A 312 PLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRP 391 (675)
T ss_dssp HHHTTTTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHHHTCSSCCCCC
T ss_pred HHHHHHHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHHHhCCCCcccc
Confidence 999999999999999999998899999999999999999999999999888889999999999999999999984 678
Q ss_pred eEEEeeccceeeEEEeCC----EEEEEEecCCCccceeEEEeeecCCCCceEEEEE-EecCccccc-CCceEEEEEEcCC
Q psy2902 459 LLLLDVTPLSLGIETMGG----IMTKMIKKNTTIPTKFSQVFSTAEDNQPAVTVKV-YQGEREMVS-GNKILGEFNLEGI 532 (945)
Q Consensus 459 ~~~~~~~~~s~gi~~~~~----~~~~li~~~~~iP~~~~~~~~~~~d~q~~~~i~i-y~g~~~~~~-~~~~lg~~~i~~~ 532 (945)
+.+.|++|++|||++.++ .+.+||++|++||++++.+|++..+++ +.+ |+|++.++. +|..||+|.|.++
T Consensus 392 ~~l~Dv~p~slgi~~~~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~~----~~~~~~ge~~~~~~~n~~lg~f~l~gi 467 (675)
T 3d2f_A 392 FKFEDIHPYSVSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDFS----MAASYTDITQLPPNTPEQIANWEITGV 467 (675)
T ss_dssp CEEEEEECSCEEEEECCTTCSCSEEEEECTTEEESEEEEEEEEESSCEE----EEEEESCGGGSCTTCCSEEEEEEEECC
T ss_pred eEEEeeeecceEeeecCCCCCcceEEEEcCCCCCCcccceeeeecCCce----EEEEEcCCcccccccCceeeEEEecCc
Confidence 999999999999999877 499999999999999999999876643 444 779988887 9999999999999
Q ss_pred CCCCCCcC-eEEEEEEECCCccEEEEEe----------ecCCCceeEEEeccCC-CCcHHHHHHHHHHHHHhHHHHHHHH
Q psy2902 533 PPALRGIP-QIEVTFDIDANGILHVTAK----------DKKTGKENKITIKANS-GLTEEEIKKMVQSAEANAEEDKRLR 600 (945)
Q Consensus 533 ~~~~~~~~-~i~v~~~~d~~g~l~v~a~----------~~~~g~~~~~~i~~~~-~~~~~~i~~~~~~~~~~~~~d~~~~ 600 (945)
|+.+.|.+ +|+|+|++|.||+|+|++. ++.+|++..++|+.+. +||++||++|+++++++..+|+..+
T Consensus 468 ~~~~~g~~~~i~v~f~id~~Gil~V~a~~~~~~~~~~~~~~t~~~~~i~i~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~ 547 (675)
T 3d2f_A 468 QLPEGQDSVPVKLKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIVAHTFGLDAKKLNELIEKENEMLAQDKLVA 547 (675)
T ss_dssp CCCSSCSCEEEEEEEEECTTSCEEEEEEEEECC------CCCCEEEECEEEEECSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcceEEEEEEEcCCCcEEEEEEEEeecccccccccCcceeeEEEecCCCCCCHHHHHHHHHHHHHHHHhhhHHH
Confidence 99999985 8999999999999999995 7889999999998754 8999999999999999999999999
Q ss_pred HHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhccc
Q psy2902 601 ELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYGHA 644 (945)
Q Consensus 601 ~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~~~ 644 (945)
++.+++|.+|+++|++++.+. +++.+.++++++.++.+.+.+.
T Consensus 548 ~~~~~~n~le~~i~~~~~~l~-~~~~~~~~~~~~~~~~~~l~~~ 590 (675)
T 3d2f_A 548 ETEDRKNTLEEYIYTLRGKLE-EEYAPFASDAEKTKLQGMLNKA 590 (675)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TTTGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHHhhCCHHHHHHHHHHHHHH
Confidence 999999999999999999997 3577899999999999888754
No 5
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=1.4e-79 Score=718.32 Aligned_cols=509 Identities=62% Similarity=0.978 Sum_probs=472.9
Q ss_pred CCceEEEEcCccceEEEEEeCCceEEEeCCCCCcCccEEEEEeeCCcEEecHHHHHhhhhCCCchhHHHHHhhCCCCCcH
Q psy2902 70 MSKIIGIDLGTTNSCVSIIEGSQPKVIENSEGARTTPSVIAYQENGEILVGAPAKRQAVTNPKNTIYAAKRLIGRKFNEK 149 (945)
Q Consensus 70 m~~viGID~GTt~s~va~~~~~~~~ii~~~~g~~~~Ps~v~~~~~~~~~~G~~A~~~~~~~~~~~i~~~k~llg~~~~~~ 149 (945)
|+.+||||||||||+||++.++.++++.++.|++.+||+|+| .+++++||.+|..+...+| ++++++|+++|+++.
T Consensus 1 m~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~-~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~-- 76 (509)
T 2v7y_A 1 MSKIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAF-KNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK-- 76 (509)
T ss_dssp CCCEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEE-SSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC--
T ss_pred CCCEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEE-CCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE--
Confidence 566899999999999999999999999999999999999999 4668999999999988999 999999999997322
Q ss_pred HHHhhhcCCCeeEEecCCCceEEEECCeeeChhhHHHHHHHHHHHHHHHHhCCCCCcEEEEcCCCCCHHHHHHHHHHHHH
Q psy2902 150 EVQKDISLMPYKIVKADNGDAWISVRGKKLAPPQISAEVLRKMKKTAEDYLGGEITEAVITVPAYFNDAQRQATKDAGRI 229 (945)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~~ 229 (945)
+.++|..++|+++++++|++|+..++.+++..+.++|||||++|++.||+++++|++.
T Consensus 77 ----------------------~~~~g~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~~~ 134 (509)
T 2v7y_A 77 ----------------------VEIEGKQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAGRI 134 (509)
T ss_dssp ----------------------EEETTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHH
T ss_pred ----------------------EEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 2346677899999999999999999999999999999999999999999999999999
Q ss_pred cCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEecCCCCCchHHHHHHHHHH
Q psy2902 230 AGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRIIDY 309 (945)
Q Consensus 230 AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~~~lGG~~iD~~l~~~ 309 (945)
|||+++++++||+|||++|+... ..+..+||||+||||+|++++++ .++.++++++.++..+||.+||+.|++|
T Consensus 135 AGl~~~~li~Ep~AAAlay~~~~--~~~~~vlV~D~GgGT~Dvsv~~~----~~g~~~v~a~~g~~~lGG~d~d~~l~~~ 208 (509)
T 2v7y_A 135 AGLEVERIINEPTAAALAYGLDK--EEDQTILVYDLGGGTFDVSILEL----GDGVFEVKATAGDNHLGGDDFDQVIIDY 208 (509)
T ss_dssp TTCEEEEEEEHHHHHHHHTTGGG--SCSEEEEEEEECSSCEEEEEEEE----ETTEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred cCCCeEEEecCHHHHHHHHhhcc--CCCCEEEEEECCCCeEEEEEEEE----cCCeEEEEEecCCCCcCHHHHHHHHHHH
Confidence 99999999999999999998876 46789999999999999999998 5578899999999999999999999999
Q ss_pred HHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeeccCCCCeEEEEEEcHHHHHHHHHHHHHHHHHH
Q psy2902 310 ILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSNGAPVHLNLKITRAKLELLVDELITRTIEP 389 (945)
Q Consensus 310 l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~~~i~~i~~~ 389 (945)
+.++|.++++.++..+++.+.+|+.+||++|+.|+......+.++.+..+..++.++.+.++|++|+++++|+++++..+
T Consensus 209 l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~ 288 (509)
T 2v7y_A 209 LVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVERTMGP 288 (509)
T ss_dssp HHHHHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHH
T ss_pred HHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHH
Confidence 99999998888888889999999999999999999998888888877654333456788999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHhCCCCCCCCCCCchhhhhHHHhhhhccCCCCceEEEeecccee
Q psy2902 390 CRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRDINPDEAVAVGAAIQGSVLSGDRKDLLLLDVTPLSL 469 (945)
Q Consensus 390 i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~~~~~~~p~~avA~GAa~~a~~~~~~~~~~~~~~~~~~s~ 469 (945)
+.++|+.+++...+|+.|+|+||+|++|+|++.|++.|+.++....||++|||+|||++|+.+++..+++++.|++|++|
T Consensus 289 i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~~a~~l~~~~~~~~~~dv~p~sl 368 (509)
T 2v7y_A 289 VRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVIAGEVKDVVLLDVTPLSL 368 (509)
T ss_dssp HHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHHHHHHHHTCCCCCCCCCBCSSEE
T ss_pred HHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHHHHHHhcCCccCceEEEeecccc
Confidence 99999999998889999999999999999999999999988888999999999999999999998888899999999999
Q ss_pred eEEEeCCEEEEEEecCCCccceeEEEeeecCCCCceEEEEEEecCcccccCCceEEEEEEcCCCCCCCCcCeEEEEEEEC
Q psy2902 470 GIETMGGIMTKMIKKNTTIPTKFSQVFSTAEDNQPAVTVKVYQGEREMVSGNKILGEFNLEGIPPALRGIPQIEVTFDID 549 (945)
Q Consensus 470 gi~~~~~~~~~li~~~~~iP~~~~~~~~~~~d~q~~~~i~iy~g~~~~~~~~~~lg~~~i~~~~~~~~~~~~i~v~~~~d 549 (945)
|+++.++.+.+||++|++||++++.+|++..|+|+.+.|.||+|++....+|..||++.|+++|+.++|.++|+|+|++|
T Consensus 369 gi~~~~~~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~~~i~v~f~id 448 (509)
T 2v7y_A 369 GIETMGGVFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGVPQIEVTFDID 448 (509)
T ss_dssp EEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECCCCCCTTCSCEEEEEEEC
T ss_pred ceeecCCceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCCCCCCCcccEEEEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccEEEEEeecCCCceeEEEeccCCCCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCc
Q psy2902 550 ANGILHVTAKDKKTGKENKITIKANSGLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGE 610 (945)
Q Consensus 550 ~~g~l~v~a~~~~~g~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e 610 (945)
.||+|+|++.+..+|++.+++|+.+.+||++||++++++++++..+|+..+++.+++|.+|
T Consensus 449 ~~gil~v~a~~~~~g~~~~~~i~~~~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~e 509 (509)
T 2v7y_A 449 ANGIVHVRAKDLGTNKEQSITIKSSSGLSEEEIQRMIKEAEENAEADRKRKEAAELRNEAD 509 (509)
T ss_dssp TTSCEEEEEEETTTCCEEEEEECSSCSCCSHHHHHHHHHHHHSCGGGGGGGGCCCC-----
T ss_pred CCceEEEEEEEcCCCcEEEEEEEecCCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHhhcC
Confidence 9999999999999999999999988899999999999999999999999999999998875
No 6
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=1.2e-56 Score=512.88 Aligned_cols=385 Identities=50% Similarity=0.808 Sum_probs=345.6
Q ss_pred ccchhhcccccccCCceEEEEcCccceEEEEEeCCceEEEeCCCCCcCccEEEEEeeCCcEEecHHHHHhhhhCCCchhH
Q psy2902 57 DEDLKRILHARRIMSKIIGIDLGTTNSCVSIIEGSQPKVIENSEGARTTPSVIAYQENGEILVGAPAKRQAVTNPKNTIY 136 (945)
Q Consensus 57 ~~~~~~~~~~~~~m~~viGID~GTt~s~va~~~~~~~~ii~~~~g~~~~Ps~v~~~~~~~~~~G~~A~~~~~~~~~~~i~ 136 (945)
|++.+.++... +.+||||||||||+||++.++.++++.++.|++.+||+|+|+++ .++||..|..+...+|.++++
T Consensus 12 ~~~~~~l~~~~---~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~-~~~vG~~A~~~~~~~~~~~~~ 87 (404)
T 3i33_A 12 DLGTENLYFQS---MPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPTNTIF 87 (404)
T ss_dssp --------------CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSS-CEEETHHHHHTTTTCSTTEEC
T ss_pred ccCcccchhcc---CCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCC-CEEecHHHHHhhHhChhhhHH
Confidence 44444555443 33899999999999999999999999999999999999999865 789999999999999999999
Q ss_pred HHHHhhCCCCCcHHHHhhhcCCCeeEEecCCCceEEEE--CC--eeeChhhHHHHHHHHHHHHHHHHhCCCCCcEEEEcC
Q psy2902 137 AAKRLIGRKFNEKEVQKDISLMPYKIVKADNGDAWISV--RG--KKLAPPQISAEVLRKMKKTAEDYLGGEITEAVITVP 212 (945)
Q Consensus 137 ~~k~llg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~VitVP 212 (945)
++|+++|++++++.++...+.+||.++. .++...+.+ .+ ..++|+++++++|++|++.++.+++..+.++|||||
T Consensus 88 ~~Kr~lg~~~~~~~~~~~~~~~p~~~~~-~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvP 166 (404)
T 3i33_A 88 DAKRLIGRKFEDATVQSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVP 166 (404)
T ss_dssp CGGGTTTCCTTSHHHHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEEC
T ss_pred HHHHHhCCCCCcHHHHHHHhhCCceEEc-cCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEEC
Confidence 9999999999999999999999999886 444454444 45 689999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHcCCccceecchhHHHHHHhccCCCCC--CCceEEEEEeCCcceEEEEEEEEeecCCceEEEEE
Q psy2902 213 AYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAFGLDKSGK--SDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLS 290 (945)
Q Consensus 213 a~~~~~qr~~l~~Aa~~AGl~~v~li~Ep~AAAl~~~~~~~~~--~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~ 290 (945)
++|++.||++|++|++.|||+++.+++||+|||++|+...... .+..++|||+||||+|++++++ .++.+++++
T Consensus 167 a~~~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~----~~~~~~v~~ 242 (404)
T 3i33_A 167 AYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTI----EDGIFEVKS 242 (404)
T ss_dssp TTCCHHHHHHHHHHHHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEE----ETTEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEE----eCCeEEEEE
Confidence 9999999999999999999999999999999999998876422 6789999999999999999998 567899999
Q ss_pred ecCCCCCchHHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeeccCCCCeEEEEEE
Q psy2902 291 TNGDTFLGGEDFDQRIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSNGAPVHLNLKI 370 (945)
Q Consensus 291 ~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~i 370 (945)
..++..+||.+||+.|++++.++|..+++.++..+++.+.+|+.+||++|+.|+......+.++.+..+ .++.+.+
T Consensus 243 ~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g----~~~~~~i 318 (404)
T 3i33_A 243 TAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEG----VDFYTSI 318 (404)
T ss_dssp EEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETT----EEEEEEE
T ss_pred EeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCC----ceeEEEE
Confidence 999999999999999999999999999998888899999999999999999999999888888766544 3788999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHh-CCCCCCCCCCCchhhhhHHHhh
Q psy2902 371 TRAKLELLVDELITRTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFF-GKDPRRDINPDEAVAVGAAIQG 449 (945)
Q Consensus 371 tr~~~e~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f-g~~~~~~~~p~~avA~GAa~~a 449 (945)
+|++|++++.++++++.+.+.++|+.+++...+|+.|+|+||+|++|+|++.|++.| +.++....||++|||.|||++|
T Consensus 319 ~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a 398 (404)
T 3i33_A 319 TRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQA 398 (404)
T ss_dssp EHHHHHHHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHH
Confidence 999999999999999999999999999998889999999999999999999999999 7888889999999999999999
Q ss_pred hhccC
Q psy2902 450 SVLSG 454 (945)
Q Consensus 450 ~~~~~ 454 (945)
+.+++
T Consensus 399 ~~l~~ 403 (404)
T 3i33_A 399 AILIG 403 (404)
T ss_dssp HHHC-
T ss_pred HHhcC
Confidence 98875
No 7
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=2e-56 Score=507.26 Aligned_cols=383 Identities=71% Similarity=1.150 Sum_probs=347.4
Q ss_pred CCceEEEEcCccceEEEEEeCCceEEEeCCCCCcCccEEEEEeeCCcEEecHHHHHhhhhCCCchhHHHHHhhCCCCCcH
Q psy2902 70 MSKIIGIDLGTTNSCVSIIEGSQPKVIENSEGARTTPSVIAYQENGEILVGAPAKRQAVTNPKNTIYAAKRLIGRKFNEK 149 (945)
Q Consensus 70 m~~viGID~GTt~s~va~~~~~~~~ii~~~~g~~~~Ps~v~~~~~~~~~~G~~A~~~~~~~~~~~i~~~k~llg~~~~~~ 149 (945)
|+.+||||||||||+||++.++.++++.++.|.+.+||+|+|+.+++++||.+|......+|.++++++|++||+.++++
T Consensus 1 m~~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~ 80 (383)
T 1dkg_D 1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDE 80 (383)
T ss_dssp --CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSH
T ss_pred CCcEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcH
Confidence 56689999999999999999999999999999999999999987778999999999999999999999999999999999
Q ss_pred HHHhhhcCCCeeEEecCCCceEEEECCeeeChhhHHHHHHHHHHHHHHHHhCCCCCcEEEEcCCCCCHHHHHHHHHHHHH
Q psy2902 150 EVQKDISLMPYKIVKADNGDAWISVRGKKLAPPQISAEVLRKMKKTAEDYLGGEITEAVITVPAYFNDAQRQATKDAGRI 229 (945)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~~ 229 (945)
+++...+.+||.++...++...+.+++..++|+++++++|+++++.++.+++..+.++|||||++|++.||+++++|++.
T Consensus 81 ~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~ 160 (383)
T 1dkg_D 81 EVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRI 160 (383)
T ss_dssp HHHHHTTTCSSEEEECSSSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEEcCCCcEEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 99988889999998888888888888889999999999999999999999988899999999999999999999999999
Q ss_pred cCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEecCCCCCchHHHHHHHHHH
Q psy2902 230 AGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRIIDY 309 (945)
Q Consensus 230 AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~~~lGG~~iD~~l~~~ 309 (945)
||++++.+++||+|||++|+.... ..+..+||||+||||+|+++++.....+++.++++++.++..+||.+||+.|+++
T Consensus 161 aGl~~~~li~Ep~Aaa~~~~~~~~-~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~ 239 (383)
T 1dkg_D 161 AGLEVKRIINEPTAAALAYGLDKG-TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINY 239 (383)
T ss_dssp TTCEESCCCBHHHHHHHHHTCCC--CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHHHHHHH
T ss_pred cCCceEEEeccHHHHHHHHHhccC-CCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHHHHH
Confidence 999999999999999999987653 3568899999999999999999854333567888888888899999999999999
Q ss_pred HHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeeccCCCCeEEEEEEcHHHHHHHHHHHHHHHHHH
Q psy2902 310 ILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSNGAPVHLNLKITRAKLELLVDELITRTIEP 389 (945)
Q Consensus 310 l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~~~i~~i~~~ 389 (945)
+.++|..+++.++..++..+.+|+.+||++|+.|+......+.++.+.....++.++.+.++|++|++++++.++++.+.
T Consensus 240 l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i~~~ 319 (383)
T 1dkg_D 240 LVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEL 319 (383)
T ss_dssp HHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHHHHHHHHHHHHHHHH
Confidence 99999988888888888999999999999999999988888888766543222346678999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHhCCCCCCCCCCCchhhhhHHHhhhhcc
Q psy2902 390 CRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRDINPDEAVAVGAAIQGSVLS 453 (945)
Q Consensus 390 i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~~~~~~~p~~avA~GAa~~a~~~~ 453 (945)
+.++|+.+++...+++.|+|+||+|++|++++.|++.|+.++....||++|||+|||++|+.++
T Consensus 320 i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 320 LKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 9999999998888999999999999999999999999998888899999999999999998764
No 8
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=5.8e-55 Score=497.65 Aligned_cols=372 Identities=51% Similarity=0.846 Sum_probs=344.6
Q ss_pred CceEEEEcCccceEEEEEeCCceEEEeCCCCCcCccEEEEEeeCCcEEecHHHHHhhhhCCCchhHHHHHhhCCCCCcHH
Q psy2902 71 SKIIGIDLGTTNSCVSIIEGSQPKVIENSEGARTTPSVIAYQENGEILVGAPAKRQAVTNPKNTIYAAKRLIGRKFNEKE 150 (945)
Q Consensus 71 ~~viGID~GTt~s~va~~~~~~~~ii~~~~g~~~~Ps~v~~~~~~~~~~G~~A~~~~~~~~~~~i~~~k~llg~~~~~~~ 150 (945)
..+||||||||+|++|++.++.++++.+..|++.+||+|+|+++ .+++|.+|......+|.++++++|+++|++++++.
T Consensus 18 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~-~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 96 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDD-ERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRS 96 (394)
T ss_dssp CSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSS-CEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHH
T ss_pred CCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCC-cEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHH
Confidence 45899999999999999999999999999999999999999865 78999999999999999999999999999999999
Q ss_pred HHhhhcCCCeeEEecCCCceEEEE--CC--eeeChhhHHHHHHHHHHHHHHHHhCCCCCcEEEEcCCCCCHHHHHHHHHH
Q psy2902 151 VQKDISLMPYKIVKADNGDAWISV--RG--KKLAPPQISAEVLRKMKKTAEDYLGGEITEAVITVPAYFNDAQRQATKDA 226 (945)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~A 226 (945)
++...+.+||.++ ..++...+.+ .+ ..++|+++++++|++|++.++.+++..+.++|||||++|++.||+++++|
T Consensus 97 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a 175 (394)
T 3qfu_A 97 VQKDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDA 175 (394)
T ss_dssp HHHHHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHH
Confidence 9999999999988 4555555554 33 68999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEecCCCCCchHHHHHHH
Q psy2902 227 GRIAGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRI 306 (945)
Q Consensus 227 a~~AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~~~lGG~~iD~~l 306 (945)
++.|||+++.+++||+|||++|+.... ..+..++|||+||||+|++++++ ....+++++..++..+||.+||+.|
T Consensus 176 ~~~aGl~~~~li~Ep~Aaa~~~~~~~~-~~~~~vlV~D~Gggt~dvsv~~~----~~~~~~~~~~~~~~~lGG~~~d~~l 250 (394)
T 3qfu_A 176 GTIAGLNVLRIVNEPTAAAIAYGLDKS-DKEHQIIVYDLGGGTFDVSLLSI----ENGVFEVQATSGDTHLGGEDFDYKI 250 (394)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHTTTTSC-SSCEEEEEEEECSSCEEEEEEEE----ETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred HHHcCCceEEEecCHHHHHHHHhhccC-CCCceEEEEEcCCCceeEEEEEE----eCCEEEEEEEcCCCCCChHHHHHHH
Confidence 999999999999999999999977653 46788999999999999999998 6678999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeeccCCCCeEEEEEEcHHHHHHHHHHHHHHH
Q psy2902 307 IDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSNGAPVHLNLKITRAKLELLVDELITRT 386 (945)
Q Consensus 307 ~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~~~i~~i 386 (945)
++++.++|..+++.++..+...+.+|+.+||++|+.|+......+.++.+..+ .++.+.++|++|+++++++++++
T Consensus 251 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~----~~~~~~i~r~~~~~~~~~~~~~i 326 (394)
T 3qfu_A 251 VRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDG----IDLSETLTRAKFEELNLDLFKKT 326 (394)
T ss_dssp HHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETT----EEEEEEEEHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCC----ceeEEEEEHHHHHHHHHHHHHHH
Confidence 99999999999998888899999999999999999999999888888766543 37889999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHh-CCCCCCCCCCCchhhhhHHHhhhhcc
Q psy2902 387 IEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFF-GKDPRRDINPDEAVAVGAAIQGSVLS 453 (945)
Q Consensus 387 ~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f-g~~~~~~~~p~~avA~GAa~~a~~~~ 453 (945)
.+.+.++|+.++....+++.|+|+||+|++|+|++.|++.| +.++....||+++||.|||++|+.++
T Consensus 327 ~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 327 LKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 99999999999998889999999999999999999999999 78888899999999999999998764
No 9
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=1.1e-54 Score=496.79 Aligned_cols=370 Identities=29% Similarity=0.471 Sum_probs=331.3
Q ss_pred ceEEEEcCccceEEEEEeCCceEEEeCCCCCcCccEEEEEeeCCcEEecHHHHHhhhhCCCchhHHHHHhhCCCCCcHHH
Q psy2902 72 KIIGIDLGTTNSCVSIIEGSQPKVIENSEGARTTPSVIAYQENGEILVGAPAKRQAVTNPKNTIYAAKRLIGRKFNEKEV 151 (945)
Q Consensus 72 ~viGID~GTt~s~va~~~~~~~~ii~~~~g~~~~Ps~v~~~~~~~~~~G~~A~~~~~~~~~~~i~~~k~llg~~~~~~~~ 151 (945)
.+||||||||+|+||++.++.++++.++.|.+.+||+|+|.+ +.++||.+|..+...+|.++++++|+++|++++++.+
T Consensus 14 ~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~-~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~~ 92 (409)
T 4gni_A 14 VVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVD-GDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVDP 92 (409)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEET-TEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCCC
T ss_pred cEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECC-CcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchhh
Confidence 389999999999999998899999999999999999999974 5889999999999999999999999999999887655
Q ss_pred HhhhcCCCeeEEecCCCceEEEECC--------eeeChhhHHHHHHHHHHHHHHHHhCCCCCcEEEEcCCCCCHHHHHHH
Q psy2902 152 QKDISLMPYKIVKADNGDAWISVRG--------KKLAPPQISAEVLRKMKKTAEDYLGGEITEAVITVPAYFNDAQRQAT 223 (945)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l 223 (945)
.... +++.+. ..++.+.+.+.. ..++++++++++|++|++.++.+++..+.++|||||++|++.||++|
T Consensus 93 ~~~~--~~~~~~-~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~ 169 (409)
T 4gni_A 93 THNH--ASAHPQ-EAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAAL 169 (409)
T ss_dssp GGGT--TSCCCE-EETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHH
T ss_pred hhhc--ccccee-cCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHH
Confidence 4432 333332 345566666543 58999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCccceecchhHHHHHHhccCC-CCCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEecCCCCCchHHH
Q psy2902 224 KDAGRIAGLEVKRIINEPTAAALAFGLDK-SGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDF 302 (945)
Q Consensus 224 ~~Aa~~AGl~~v~li~Ep~AAAl~~~~~~-~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~~~lGG~~i 302 (945)
++|++.|||+++.+++||+|||++|+... ....+..+||||+||||+|++++++ .++.++++++.++..+||.+|
T Consensus 170 ~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~vlv~D~GgGT~dvsv~~~----~~~~~~v~~~~~~~~lGG~~~ 245 (409)
T 4gni_A 170 IAAAAAADLEVLQLISEPAAAVLAYDARPEATISDKIIVVADLGGSRSDVTVLAS----RSGMYTILATVHDYEYHGIAL 245 (409)
T ss_dssp HHHHHHTTCEEEEEEEHHHHHHHHTTC------CCEEEEEEEECSSCEEEEEEEE----ETTEEEEEEEEEESSSSHHHH
T ss_pred HHHHHHcCCCeEEEEcCHHHHHHHHhcccccCCCCCEEEEEECCCCceEEEEEEE----eCCeEEEEEecCCCCcCHHHH
Confidence 99999999999999999999999998764 2356889999999999999999998 567899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhC--CCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeeccCCCCeEEEEEEcHHHHHHHHH
Q psy2902 303 DQRIIDYILDEFNKING--IDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSNGAPVHLNLKITRAKLELLVD 380 (945)
Q Consensus 303 D~~l~~~l~~~~~~~~~--~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~ 380 (945)
|..|++++.++|...++ .+...+.+.+.+|+.+||++|+.|+......+.++.+..+ .++.+.+||++|+++++
T Consensus 246 d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~----~~~~~~itr~~~~~~~~ 321 (409)
T 4gni_A 246 DKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTNASFSVESLIDG----LDFASTINRLRYETIAR 321 (409)
T ss_dssp HHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSEEEEEEEEEETT----EEEEEEEEHHHHHHHTH
T ss_pred HHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCceEEEeecccCC----cceEEEeeHHHHHHHHH
Confidence 99999999999998888 7788899999999999999999999999988888876544 37899999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHhCCCC--------CCCCCCCchhhhhHHHhhhhc
Q psy2902 381 ELITRTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDP--------RRDINPDEAVAVGAAIQGSVL 452 (945)
Q Consensus 381 ~~i~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~~--------~~~~~p~~avA~GAa~~a~~~ 452 (945)
++++++..+|.++|+.+++...+|+.|+|+||+|++|+|++.|++.|+.++ ....||++|||+|||++|+..
T Consensus 322 ~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~ 401 (409)
T 4gni_A 322 TVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLI 401 (409)
T ss_dssp HHHHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhh
Confidence 999999999999999999988899999999999999999999999998763 567899999999999999865
Q ss_pred c
Q psy2902 453 S 453 (945)
Q Consensus 453 ~ 453 (945)
.
T Consensus 402 ~ 402 (409)
T 4gni_A 402 Q 402 (409)
T ss_dssp H
T ss_pred h
Confidence 4
No 10
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=100.00 E-value=2.9e-48 Score=404.10 Aligned_cols=230 Identities=31% Similarity=0.528 Sum_probs=202.4
Q ss_pred CCCCccceeeccccccccccceeeEeeccccccCCCCCccccccCcCcccCCCCCCCceEeEe--ece--eeeeecCCCC
Q psy2902 686 GSNGKDLRYNLEITLEQAAYGFNTSIRVPSWDICKSCYGNGAKKGTSPISCFTCSGQGQVRMQ--QGF--FSIQQTCPKC 761 (945)
Q Consensus 686 ~~~g~~~~~~l~~~~~~~~~g~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~--~~~--~~~~~~C~~C 761 (945)
+.++.|++++|+++|+++|+|.++.+.+.+...|+.|+|+|..... ..+|+.|+|+|++... .|+ ++++.+|+.|
T Consensus 8 ~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~-~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C 86 (248)
T 1nlt_A 8 PQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGA-VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVC 86 (248)
T ss_dssp CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTT-CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTC
T ss_pred CCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCC-CccCCCCCCCcEEEEEEecCceEEEEEEcCCCC
Confidence 3468899999999999999999999999999999999999999887 4899999999986432 232 3678899999
Q ss_pred CCceEEe--ecCCcccCCCceEeeeeeEEEEeecCCCCCeEEEEcCCCCCCCCCCCCccEEEEEEEecCCcccccCCCce
Q psy2902 762 QGAGKVI--PHPCLDCNGIGRIKRNKTLEVKIPAGIENNMRIRSTGNGEPGLNGGSNGNLYIEIHIKPHKVFERDGDDLH 839 (945)
Q Consensus 762 ~G~g~~~--~~~c~~c~G~g~~~~~~~l~v~ip~G~~~g~~i~~~g~G~~~~~~~~~Gdl~i~i~v~~~~~~~r~g~dl~ 839 (945)
+|.|.++ .++|..|.|.|.+.+.++++|+||+|+++|++|+|+|+|++.++ +.+|||||+|++++|+.|+|+|+|||
T Consensus 87 ~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~-g~~GDl~v~i~v~~h~~F~R~G~DL~ 165 (248)
T 1nlt_A 87 HGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPD-VIPGDVVFIVSERPHKSFKRDGDDLV 165 (248)
T ss_dssp SSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTT-CBCCCEEEEEEECCCSSCEEETTEEE
T ss_pred CCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCCC-CCcceEEEEEEEecCccceeeCCEEE
Confidence 9999999 89999999999999999999999999999999999999999754 58999999999999999999999999
Q ss_pred eEEeeCHHHHhcCCeEEEecCCCe-EEEEeCCC--CCCCcEEEECCCCcCCCCCCCCccEEEEEEEECCCC--CCHHHHH
Q psy2902 840 YEMPISFSTAALGGEIEAPTLNGK-AFFVIPEG--TQSGKIFRLRGKGIKNIRSSIPGDLFCHVTIETPVQ--LTEYQKK 914 (945)
Q Consensus 840 ~~~~i~l~eal~G~~~~v~~l~g~-~~~~i~~~--~~~g~~~~i~g~G~~~~~~~~~Gdl~v~~~i~~p~~--l~~~~~~ 914 (945)
++++|+|.||++|++++|+||||+ +.+.||++ ++||+++||+|+|||..++..+|||||+|+|.||+. ||++|++
T Consensus 166 ~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~~~Ls~~q~~ 245 (248)
T 1nlt_A 166 YEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPENHFTSEENLK 245 (248)
T ss_dssp EEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC----------
T ss_pred EEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEEEECCCCCCCCHHHHH
Confidence 999999999999999999999995 78889998 999999999999999865446899999999999999 9999999
Q ss_pred HHH
Q psy2902 915 LLR 917 (945)
Q Consensus 915 ~~~ 917 (945)
+|+
T Consensus 246 ~l~ 248 (248)
T 1nlt_A 246 KLE 248 (248)
T ss_dssp ---
T ss_pred hhC
Confidence 875
No 11
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=100.00 E-value=4.5e-44 Score=386.16 Aligned_cols=282 Identities=30% Similarity=0.503 Sum_probs=163.9
Q ss_pred CCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhccccCCCCCCCC--
Q psy2902 576 GLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYGHAGIDPNMSGS-- 653 (945)
Q Consensus 576 ~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~~~g~~~~~~g~-- 653 (945)
..|.+||.+..+++....++|+.... .+..+|.++++||++|+|+++|+.||.++..+..++.+++
T Consensus 39 ~as~~eIk~aYr~la~~~HPDk~~~~------------~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~~~~ 106 (329)
T 3lz8_A 39 TDDLKTIKTAYRRLARKYHPDVSKEN------------DAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGRQRQ 106 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCh------------HHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCcccccc
Confidence 35788999999999999999974321 2345788889999999999999999998443211111110
Q ss_pred --CcccccccccccccccccccCCCCCCCCCCCCCCCCccceeeccccccccccceeeEeeccccccCCCCCccccccCc
Q psy2902 654 --SASAEASNFADAFGDIFGDIFGSNRDRDNNNKGSNGKDLRYNLEITLEQAAYGFNTSIRVPSWDICKSCYGNGAKKGT 731 (945)
Q Consensus 654 --~~~~~~~~f~d~f~~~F~~~~g~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~g~~~~~~~~~~~~C~~C~G~G~~~~~ 731 (945)
++++.+.+|+|+|++|||++.+ + ++.+++.+|.|+.++|+++|++++.|+++.+.+.+...|
T Consensus 107 ~~~~~f~~~~f~diF~~~Fg~~g~-~---~~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~------------ 170 (329)
T 3lz8_A 107 THEQSYSQQDFDDIFSSMFGQQAH-Q---RRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYN------------ 170 (329)
T ss_dssp ----------------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECC------------
T ss_pred cccCCcCCCchhhhhHhhhcCcCC-C---CCCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEeec------------
Confidence 1111223567777777764311 1 112235678999999999999999999999988754321
Q ss_pred CcccCCCCCCCceEeEeeceeeeeecCCCCCCceEEeecCCcccCCCceEeeeeeEEEEeecCCCCCeEEEEcCCCCCCC
Q psy2902 732 SPISCFTCSGQGQVRMQQGFFSIQQTCPKCQGAGKVIPHPCLDCNGIGRIKRNKTLEVKIPAGIENNMRIRSTGNGEPGL 811 (945)
Q Consensus 732 ~~~~C~~C~G~G~~~~~~~~~~~~~~C~~C~G~g~~~~~~c~~c~G~g~~~~~~~l~v~ip~G~~~g~~i~~~g~G~~~~ 811 (945)
|.|.+ .+.+.++++|+||+|+++|++|+|+|+|++.+
T Consensus 171 ---------g~G~v----------------------------------~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~ 207 (329)
T 3lz8_A 171 ---------VFGMI----------------------------------ESETPKTLNVKIPAGVVDGQRIRLKGQGTPGE 207 (329)
T ss_dssp ---------SCC-C----------------------------------CEEEEEEEEEEECTTCCTTCEEEESSCSCCC-
T ss_pred ---------CCeEE----------------------------------EEecceEEEEeCCCCCCCCCEEEEcccccCCC
Confidence 22222 12235689999999999999999999999988
Q ss_pred CCCCCccEEEEEEEecCCcccccCCCceeEEeeCHHHHhcCCeEEEecCCCeEEEEeCCCCCCCcEEEECCCCcCCCCCC
Q psy2902 812 NGGSNGNLYIEIHIKPHKVFERDGDDLHYEMPISFSTAALGGEIEAPTLNGKAFFVIPEGTQSGKIFRLRGKGIKNIRSS 891 (945)
Q Consensus 812 ~~~~~Gdl~i~i~v~~~~~~~r~g~dl~~~~~i~l~eal~G~~~~v~~l~g~~~~~i~~~~~~g~~~~i~g~G~~~~~~~ 891 (945)
+++.+|||||+|++++|+.|+|+|+||+++++|+++||++|++++|+||||++.+.||++++||+++||+|+|||.. +
T Consensus 208 ~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~v~l~ip~gt~~g~~~rl~G~GmP~~--~ 285 (329)
T 3lz8_A 208 NGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVSK--T 285 (329)
T ss_dssp --CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEEECTTCCTTCEEEETTCSCBCS--S
T ss_pred CCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCCEEEEECCCCCCCCEEEEcCCCCCCC--C
Confidence 77889999999999999999999999999999999999999999999999999999999999999999999999975 4
Q ss_pred CCccEEEEEEEECCCCCCHHHHHHHHHHHHhhhcCCCCCCCcc
Q psy2902 892 IPGDLFCHVTIETPVQLTEYQKKLLRSLETSILEGGFKHNPRT 934 (945)
Q Consensus 892 ~~Gdl~v~~~i~~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (945)
.+|||||+|+|.||+.||++|+++|++|+++.. .++||.
T Consensus 286 ~rGDL~v~~~V~~P~~l~~~q~~~l~~~~~~~~----~~~~~~ 324 (329)
T 3lz8_A 286 HTGDLFAVIKIVMPTKPDEKARELWQQLAAAEA----SFDPRK 324 (329)
T ss_dssp CBCCEEEEEEECCCSSCCHHHHHHHHHHHHHTT----TCCTTT
T ss_pred CCCCEEEEEEEECCCCCCHHHHHHHHHHHhhcc----CCCcch
Confidence 689999999999999999999999999998422 467875
No 12
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=8.5e-38 Score=348.65 Aligned_cols=315 Identities=27% Similarity=0.366 Sum_probs=237.7
Q ss_pred CCceEEEEcCccceEEEEEeCCceEEEeCCCCCcCccEEEEEeeC-Cc-EEecHHHHHhhhhCCCchhHHHHHhhCCCCC
Q psy2902 70 MSKIIGIDLGTTNSCVSIIEGSQPKVIENSEGARTTPSVIAYQEN-GE-ILVGAPAKRQAVTNPKNTIYAAKRLIGRKFN 147 (945)
Q Consensus 70 m~~viGID~GTt~s~va~~~~~~~~ii~~~~g~~~~Ps~v~~~~~-~~-~~~G~~A~~~~~~~~~~~i~~~k~llg~~~~ 147 (945)
|+.+||||||||+|++++..++ .++ .+||+|+|+.+ ++ .++|.+|......+|.++..
T Consensus 2 ~~~~igIDlGT~~s~v~~~~~~--~~~-------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~----------- 61 (344)
T 1jce_A 2 LRKDIGIDLGTANTLVFLRGKG--IVV-------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKA----------- 61 (344)
T ss_dssp --CEEEEEECSSEEEEEETTTE--EEE-------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEE-----------
T ss_pred CCceEEEEcCcCcEEEEECCCC--EEE-------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEE-----------
Confidence 4458999999999999875332 222 27999999876 44 47999998776666665421
Q ss_pred cHHHHhhhcCCCeeEEecCCCceEEEECCeeeChhhHHHHHHHHHHHHHHHHhCCCCCcEEEEcCCCCCHHHHHHHHHHH
Q psy2902 148 EKEVQKDISLMPYKIVKADNGDAWISVRGKKLAPPQISAEVLRKMKKTAEDYLGGEITEAVITVPAYFNDAQRQATKDAG 227 (945)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa 227 (945)
.+|++ ...+...+....++.++...+..........+|||||++|++.||+++++|+
T Consensus 62 ---------~~p~~--------------~g~i~~~~~~~~i~~~~l~~~~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~ 118 (344)
T 1jce_A 62 ---------IRPMR--------------DGVIADYTVALVMLRYFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDAG 118 (344)
T ss_dssp ---------ECCEE--------------TTEESSHHHHHHHHHHHHHHHHTSCCSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred ---------EecCC--------------CCeeCChHHHHHHHHHHHHHHhhccccCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 01211 1122334445555555555543311112478999999999999999999999
Q ss_pred HHcCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEecCCCCCchHHHHHHHH
Q psy2902 228 RIAGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRII 307 (945)
Q Consensus 228 ~~AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~~~lGG~~iD~~l~ 307 (945)
+.||++.+.+++||+|||++|+... ..+..++|||+||||+|++++... ..+ ..++..+||.+||+.|.
T Consensus 119 ~~aG~~~~~li~ep~Aaa~~~~~~~--~~~~~~lVvDiGggttdvsv~~~~-----~~~----~~~~~~lGG~~id~~l~ 187 (344)
T 1jce_A 119 LEAGASKVFLIEEPMAAAIGSNLNV--EEPSGNMVVDIGGGTTEVAVISLG-----SIV----TWESIRIAGDEMDEAIV 187 (344)
T ss_dssp HHTTCSEEEEEEHHHHHHHHTTCCT--TSSSCEEEEEECSSCEEEEEEETT-----EEE----EEEEESCSHHHHHHHHH
T ss_pred HHcCCCeEeccCCHHHHHHhcCCCC--CCCceEEEEEeCCCeEEEEEEEcC-----CEE----eeCCCCccChhHHHHHH
Confidence 9999999999999999999998765 456789999999999999999862 111 23457899999999999
Q ss_pred HHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcc------eeeeeceeeccCCCCeEEEEEEcHHHHHHHHHH
Q psy2902 308 DYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQ------TEINEPYIAMSNGAPVHLNLKITRAKLELLVDE 381 (945)
Q Consensus 308 ~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~------~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~~ 381 (945)
+++.+++.. ++. ...||++|+.|+.... ..+.++.... ....+..++++|++|+++++|
T Consensus 188 ~~l~~~~~~----~~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~i~~~~~~~~~~~ 252 (344)
T 1jce_A 188 QYVRETYRV----AIG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDL--STGLPRKLTLKGGEVREALRS 252 (344)
T ss_dssp HHHHHHHCE----ECC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEET--TTTEEEEEEEEHHHHHHHTHH
T ss_pred HHHHHHhCc----ccC---------HHHHHHHHHHHhccCccccCCcceEEEecccc--CCCCceeEEEeHHHHHHHHHH
Confidence 999877642 111 4689999999997643 2344432211 112356889999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCC--CCCC-CcEEEecCccccHHHHHHHHHHhCCCCCCCCCCCchhhhhHHHhhhhcc
Q psy2902 382 LITRTIEPCRIAIKDAGIK--VSDI-NDIILVGGMTRMPKVQEKVKEFFGKDPRRDINPDEAVAVGAAIQGSVLS 453 (945)
Q Consensus 382 ~i~~i~~~i~~~l~~~~~~--~~~i-~~ViLvGG~s~~p~v~~~l~~~fg~~~~~~~~p~~avA~GAa~~a~~~~ 453 (945)
.++++.+.|.++|+.++.. ...+ +.|+|+||+|++|.+++.|++.|+.++....||+++||+|||++|..++
T Consensus 253 ~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 253 VVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred HHHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHHHHHHHhChH
Confidence 9999999999999987532 1224 6899999999999999999999998888788999999999999998544
No 13
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=100.00 E-value=2e-37 Score=306.40 Aligned_cols=176 Identities=21% Similarity=0.403 Sum_probs=153.9
Q ss_pred CccceeeccccccccccceeeEeeccccccCCCCCccccccCcCcccCCCCCCCceEeEeeceeeeeecCCCCCCceEEe
Q psy2902 689 GKDLRYNLEITLEQAAYGFNTSIRVPSWDICKSCYGNGAKKGTSPISCFTCSGQGQVRMQQGFFSIQQTCPKCQGAGKVI 768 (945)
Q Consensus 689 g~~~~~~l~~~~~~~~~g~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~~~~~C~~C~G~g~~~ 768 (945)
+.++.++|+++|+++|+|+++.+.+.+ .|+.|+|.|
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~-------------------~c~~c~G~g------------------------- 37 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISH-------------------KRLNPDGKS------------------------- 37 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEE-------------------EEECTTSSC-------------------------
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEec-------------------ccCCCCCce-------------------------
Confidence 468899999999999999999987532 233333333
Q ss_pred ecCCcccCCCceEeeeeeEEEEeecCCCCCeEEEEcCCCCCCCCCCCCccEEEEEEEecCCcccccCCCceeEEeeCHHH
Q psy2902 769 PHPCLDCNGIGRIKRNKTLEVKIPAGIENNMRIRSTGNGEPGLNGGSNGNLYIEIHIKPHKVFERDGDDLHYEMPISFST 848 (945)
Q Consensus 769 ~~~c~~c~G~g~~~~~~~l~v~ip~G~~~g~~i~~~g~G~~~~~~~~~Gdl~i~i~v~~~~~~~r~g~dl~~~~~i~l~e 848 (945)
.+.+.++++|+||+|+++|++|+|+|+|++.++ +.+|||||+|++++|+.|+|+|+||+++++|++.|
T Consensus 38 -----------~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~-g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~e 105 (181)
T 3agx_A 38 -----------IRNEDKILTIEVKKGWKEGTKITFPKEGDQTSN-NIPADIVFVLKDKPHNIFKRDGSDVIYPARISLRE 105 (181)
T ss_dssp -----------EEEEEEEEEEEECTTCCTTCEEEETTCSCCCSS-SCCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHH
T ss_pred -----------EEEEeEEEEEEECCCccCCcEEEEeeccccCCC-CCcccEEEEEEEeccccceeeCCcEEEEEEcCHHH
Confidence 345677899999999999999999999999774 68999999999999999999999999999999999
Q ss_pred HhcCCeEEEecCCCe-EEEEeCCCCCCCcEEEECCCCcCCCCC-CCCccEEEEEEEECCCCCCHHHHHHHHHHH
Q psy2902 849 AALGGEIEAPTLNGK-AFFVIPEGTQSGKIFRLRGKGIKNIRS-SIPGDLFCHVTIETPVQLTEYQKKLLRSLE 920 (945)
Q Consensus 849 al~G~~~~v~~l~g~-~~~~i~~~~~~g~~~~i~g~G~~~~~~-~~~Gdl~v~~~i~~p~~l~~~~~~~~~~~~ 920 (945)
|++|++++|+||||+ ..+.+|++++||+++||+|+|||..+. +.+|||||+|+|.||+.||++|+++|++++
T Consensus 106 AllG~~i~v~tldG~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~ls~~q~~~l~~~~ 179 (181)
T 3agx_A 106 ALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPERIPQTSRTVLEQVL 179 (181)
T ss_dssp HHHCEEEEEECTTSCEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSCCCHHHHHHHHHHS
T ss_pred HhCCCEEEeECCCCCEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHhc
Confidence 999999999999995 778899999999999999999998653 568999999999999999999999999986
No 14
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.2e-36 Score=295.33 Aligned_cols=175 Identities=25% Similarity=0.298 Sum_probs=159.4
Q ss_pred CccceeeccccccccccceeeEeeccccccCCCCCccccccCcCcccCCCCCCCceEeEeeceeeeeecCCCCCCceEEe
Q psy2902 689 GKDLRYNLEITLEQAAYGFNTSIRVPSWDICKSCYGNGAKKGTSPISCFTCSGQGQVRMQQGFFSIQQTCPKCQGAGKVI 768 (945)
Q Consensus 689 g~~~~~~l~~~~~~~~~g~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~~~~~C~~C~G~g~~~ 768 (945)
+.|++++|+++|+++|+|+++.+.+.+...|+.
T Consensus 3 g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~----------------------------------------------- 35 (180)
T 2q2g_A 3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEH----------------------------------------------- 35 (180)
T ss_dssp -CEEEEEEEECHHHHHHCEEEEEEEEEEEEETT-----------------------------------------------
T ss_pred CCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCC-----------------------------------------------
Confidence 578999999999999999999999887766631
Q ss_pred ecCCcccCCCceEeeeeeEEEEeecCCCCCeEEEEcCCCCCCCCCCCCccEEEEEEEecCCcccccCCCceeEEeeCHHH
Q psy2902 769 PHPCLDCNGIGRIKRNKTLEVKIPAGIENNMRIRSTGNGEPGLNGGSNGNLYIEIHIKPHKVFERDGDDLHYEMPISFST 848 (945)
Q Consensus 769 ~~~c~~c~G~g~~~~~~~l~v~ip~G~~~g~~i~~~g~G~~~~~~~~~Gdl~i~i~v~~~~~~~r~g~dl~~~~~i~l~e 848 (945)
|.+.+.++++|+||+|+++|++|+|+|+|+++.+++.+|||||+|++++|+.|+|+|+||+++++|++.|
T Consensus 36 ----------g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~e 105 (180)
T 2q2g_A 36 ----------KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMKVTIPLVR 105 (180)
T ss_dssp ----------EEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEEEEEEHHH
T ss_pred ----------ceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEEEEcCHHH
Confidence 2345667899999999999999999999999666778999999999999999999999999999999999
Q ss_pred HhcCCeEEEecCCCe-EEEEeCCCCCCCcEEEECCCCcCCCCC-CCCccEEEEEEEECCCCCCHHHHHHHHHHH
Q psy2902 849 AALGGEIEAPTLNGK-AFFVIPEGTQSGKIFRLRGKGIKNIRS-SIPGDLFCHVTIETPVQLTEYQKKLLRSLE 920 (945)
Q Consensus 849 al~G~~~~v~~l~g~-~~~~i~~~~~~g~~~~i~g~G~~~~~~-~~~Gdl~v~~~i~~p~~l~~~~~~~~~~~~ 920 (945)
|++|++++|+||||+ ..+.+|++++||+++||+|+|||..++ +.+|||||+|+|.||+.||++|+++|++++
T Consensus 106 AllG~~i~v~tldG~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~~~ 179 (180)
T 2q2g_A 106 ALTGFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKSLTPEQKKLIKEAL 179 (180)
T ss_dssp HHHCEEEEEECTTCCEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSCCCHHHHHHHHHHC
T ss_pred HhCCCEEEeeCCCCCEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHhc
Confidence 999999999999995 778899999999999999999998654 568999999999999999999999999985
No 15
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=100.00 E-value=3.6e-34 Score=280.40 Aligned_cols=168 Identities=24% Similarity=0.416 Sum_probs=151.2
Q ss_pred ccceeeccccccccccceeeEeeccccccCCCCCccccccCcCcccCCCCCCCceEeEeeceeeeeecCCCCCCceEEee
Q psy2902 690 KDLRYNLEITLEQAAYGFNTSIRVPSWDICKSCYGNGAKKGTSPISCFTCSGQGQVRMQQGFFSIQQTCPKCQGAGKVIP 769 (945)
Q Consensus 690 ~~~~~~l~~~~~~~~~g~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~~~~~C~~C~G~g~~~~ 769 (945)
.|++++|+++|+++|+|+++.+.+.+. |
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~--~-------------------------------------------------- 28 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRK--G-------------------------------------------------- 28 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEE--E--------------------------------------------------
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEe--c--------------------------------------------------
Confidence 378899999999999999999987643 0
Q ss_pred cCCcccCCCceEeeeeeEEEEeecCCCCCeEEEEcCCCCCCCCCCCCccEEEEEEEecCCcccccCCCceeEEeeCHHHH
Q psy2902 770 HPCLDCNGIGRIKRNKTLEVKIPAGIENNMRIRSTGNGEPGLNGGSNGNLYIEIHIKPHKVFERDGDDLHYEMPISFSTA 849 (945)
Q Consensus 770 ~~c~~c~G~g~~~~~~~l~v~ip~G~~~g~~i~~~g~G~~~~~~~~~Gdl~i~i~v~~~~~~~r~g~dl~~~~~i~l~ea 849 (945)
+.|.. +.++++|+||+|+++|++|+|+|+|++..+++.+|||||+|++++|+.|+|+|+||+++++|++.||
T Consensus 29 -------~~G~~-~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eA 100 (170)
T 1c3g_A 29 -------PHGAS-EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLPLSFKES 100 (170)
T ss_dssp -------TTTEE-EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEECCBHHHH
T ss_pred -------CCCcE-EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEEcCHHHH
Confidence 01223 5578999999999999999999999987777889999999999999999999999999999999999
Q ss_pred hcCCeEEEecCCCe-EEEEeCCCCCCCcEEEECCCCcCCCCC-CCCccEEEEEEEECCCCCCHHHHHHHH
Q psy2902 850 ALGGEIEAPTLNGK-AFFVIPEGTQSGKIFRLRGKGIKNIRS-SIPGDLFCHVTIETPVQLTEYQKKLLR 917 (945)
Q Consensus 850 l~G~~~~v~~l~g~-~~~~i~~~~~~g~~~~i~g~G~~~~~~-~~~Gdl~v~~~i~~p~~l~~~~~~~~~ 917 (945)
++|++++|+||||+ ..+.+|+++++|+++||+|+|||..++ +.+|||||+|+|.||+.||++|+++|+
T Consensus 101 llG~~~~v~tldG~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~ 170 (170)
T 1c3g_A 101 LLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPISLNDAQKRAID 170 (170)
T ss_dssp HHCEEEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSSCCTTHHHHTC
T ss_pred hCCCeEEeeCCCCCEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCCCCCHHHHHhhC
Confidence 99999999999996 788899999999999999999998644 468999999999999999999999873
No 16
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=99.96 E-value=2.8e-29 Score=255.44 Aligned_cols=183 Identities=66% Similarity=0.950 Sum_probs=174.9
Q ss_pred EEEeeccceeeEEEeCCEEEEEEecCCCccceeEEEeeecCCCCceEEEEEEecCcccccCCceEEEEEEcCCCCCCCCc
Q psy2902 460 LLLDVTPLSLGIETMGGIMTKMIKKNTTIPTKFSQVFSTAEDNQPAVTVKVYQGEREMVSGNKILGEFNLEGIPPALRGI 539 (945)
Q Consensus 460 ~~~~~~~~s~gi~~~~~~~~~li~~~~~iP~~~~~~~~~~~d~q~~~~i~iy~g~~~~~~~~~~lg~~~i~~~~~~~~~~ 539 (945)
++.|++|+|+||++.+|.|.+||++|++||++++.+|++..|||+.+.|.||+|++..+.+|..||+|.|.++|+.|+|.
T Consensus 2 ~l~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~p~G~ 81 (219)
T 4e81_A 2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPAPRGM 81 (219)
T ss_dssp CCCCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred eEEEecCcEEEEEEeCCEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCCCCCC
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEEECCCccEEEEEeecCCCceeEEEeccCCCCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccch
Q psy2902 540 PQIEVTFDIDANGILHVTAKDKKTGKENKITIKANSGLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKS 619 (945)
Q Consensus 540 ~~i~v~~~~d~~g~l~v~a~~~~~g~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~ 619 (945)
++|+|+|.+|.||+|+|+|.+..||+...++|..+.+||++||++|+++++++..+|+..+++.+++|.+++++|.+++.
T Consensus 82 ~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~Ls~eeI~~m~~~a~~~~~eD~~~r~~~e~kn~le~~i~~~~~~ 161 (219)
T 4e81_A 82 PQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQ 161 (219)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTCCEEEEEECTTCSCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEeCCCCCEeeeeeccccCccceEeeeccccccHHHHHHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999988899999999999999999999999999999999999999999998
Q ss_pred hhhhhhhhccChhHHHHHHHHhccc
Q psy2902 620 LKIKEAYEVLSDSEKRIIYDQYGHA 644 (945)
Q Consensus 620 ~~~~~~~~~l~~~~k~~~~d~~~~~ 644 (945)
+. ++.+.++++++.++.+.+.+.
T Consensus 162 l~--~~~~~l~~~~k~~i~~~l~~~ 184 (219)
T 4e81_A 162 VE--EAGDKLPADDKTAIESALTAL 184 (219)
T ss_dssp HH--HHGGGSCHHHHHHHHHHHHHH
T ss_pred HH--HhhhhCCHHHHHHHHHHHHHH
Confidence 87 467889999999988877653
No 17
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.96 E-value=1.2e-28 Score=241.76 Aligned_cols=165 Identities=59% Similarity=0.907 Sum_probs=154.4
Q ss_pred CCceEEEeeccceeeEEEeCCEEEEEEecCCCccceeEEEeeecCCCCceEEEEEEecCcccccCCceEEEEEEcCCCCC
Q psy2902 456 RKDLLLLDVTPLSLGIETMGGIMTKMIKKNTTIPTKFSQVFSTAEDNQPAVTVKVYQGEREMVSGNKILGEFNLEGIPPA 535 (945)
Q Consensus 456 ~~~~~~~~~~~~s~gi~~~~~~~~~li~~~~~iP~~~~~~~~~~~d~q~~~~i~iy~g~~~~~~~~~~lg~~~i~~~~~~ 535 (945)
...+.+.|++|+|+||++.+|.|.+||++|++||++++++|++..|+|+.+.|.||||++..+.+|..||+|.|.++|+.
T Consensus 17 ~~~f~l~DV~P~slGie~~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gipp~ 96 (182)
T 3n8e_A 17 NLYFQSMDVTPLSLGIETLGGVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGIPPA 96 (182)
T ss_dssp -------CBCSSCEEEECTTSBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCC
T ss_pred CCCEEEEEecCCEEEEEEeCCEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCCCCC
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCeEEEEEEECCCccEEEEEeecCCCceeEEEeccCCCCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeee
Q psy2902 536 LRGIPQIEVTFDIDANGILHVTAKDKKTGKENKITIKANSGLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHS 615 (945)
Q Consensus 536 ~~~~~~i~v~~~~d~~g~l~v~a~~~~~g~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~ 615 (945)
|+|.++|+|+|++|.||+|+|+|.+..+|++..++|..+.+||++||++|++++++++.+|+..+++.+++|.+|+++|.
T Consensus 97 p~G~~~IeVtf~iD~nGiL~VsA~d~~tg~~~~i~I~~~~~Ls~eei~~mi~~a~~~~~eD~~~~~~~e~kn~le~~iy~ 176 (182)
T 3n8e_A 97 PRGVPQIEVTFDIDANGIVHVSAKDKGTGREQQIVIQSSGGLSKDDIENMVKNAEKYAEEDRRKKERVEAVNMAEGIIHD 176 (182)
T ss_dssp CTTCSCEEEEEEECTTCCEEEEEEETTTCCEEEEEESCCCCCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeeEEEEEEEecCCEEEEEEEEcCCCCEeeEEEecCccCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998888999999999999999999999999999999999999999
Q ss_pred ccchh
Q psy2902 616 TKKSL 620 (945)
Q Consensus 616 ~~~~~ 620 (945)
+++.+
T Consensus 177 ~~~~l 181 (182)
T 3n8e_A 177 TETKM 181 (182)
T ss_dssp CSCCC
T ss_pred HHHhh
Confidence 88765
No 18
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.95 E-value=3e-27 Score=225.67 Aligned_cols=150 Identities=57% Similarity=0.890 Sum_probs=141.7
Q ss_pred EEeeccceeeEEEeCCEEEEEEecCCCccceeEEEeeecCCCCceEEEEEEecCcccccCCceEEEEEEcCCCCCCCCcC
Q psy2902 461 LLDVTPLSLGIETMGGIMTKMIKKNTTIPTKFSQVFSTAEDNQPAVTVKVYQGEREMVSGNKILGEFNLEGIPPALRGIP 540 (945)
Q Consensus 461 ~~~~~~~s~gi~~~~~~~~~li~~~~~iP~~~~~~~~~~~d~q~~~~i~iy~g~~~~~~~~~~lg~~~i~~~~~~~~~~~ 540 (945)
+.|++|+|+||++.+|.|.+||++|++||++++++|++..|+|+.+.|.||||++..+.+|..||+|.|.++|+.|+|.+
T Consensus 2 ~~Dv~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3dob_A 2 NADVAPLSLGIETAGGVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVP 81 (152)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCC
T ss_pred ceeeecceEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCCCCCc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEECCCccEEEEEeecCCCceeEEEeccCCC-CcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCc
Q psy2902 541 QIEVTFDIDANGILHVTAKDKKTGKENKITIKANSG-LTEEEIKKMVQSAEANAEEDKRLRELAESRNHGE 610 (945)
Q Consensus 541 ~i~v~~~~d~~g~l~v~a~~~~~g~~~~~~i~~~~~-~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e 610 (945)
+|+|+|++|.||+|+|+|.|..||+...++|..+.+ ||++||++|+++++++..+|+..+++.+++|.+|
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3dob_A 82 QIEVTFNIDANGILNVSAEDKSTGKSNRITIQNEKGRLTQSDIDRMVHEAKQFEKEDGEQRERVQARNQLE 152 (152)
T ss_dssp CEEEEEEECTTCCEEEEEEETTTCCEEEEEECCC----CHHHHHHHHHHHHHTHHHHHHHHHTCCCCSEEC
T ss_pred eEEEEEEeCCCCeEEEEEEEcCCCCEEEEEEEcCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999997754 9999999999999999999999999999999875
No 19
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.95 E-value=5e-27 Score=224.70 Aligned_cols=150 Identities=60% Similarity=0.887 Sum_probs=144.9
Q ss_pred EEeeccceeeEEEeCCEEEEEEecCCCccceeEEEeeecCCCCceEEEEEEecCcccccCCceEEEEEEcCCCCCCCCcC
Q psy2902 461 LLDVTPLSLGIETMGGIMTKMIKKNTTIPTKFSQVFSTAEDNQPAVTVKVYQGEREMVSGNKILGEFNLEGIPPALRGIP 540 (945)
Q Consensus 461 ~~~~~~~s~gi~~~~~~~~~li~~~~~iP~~~~~~~~~~~d~q~~~~i~iy~g~~~~~~~~~~lg~~~i~~~~~~~~~~~ 540 (945)
+.|++|+|+||++.+|.|.+||++|++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.++|+.|+|.+
T Consensus 2 ~~Dv~p~slGi~~~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (152)
T 3h0x_A 2 NADVNALTLGIETTGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ccceeccEEEEEEcCCEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCCCCCc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEECCCccEEEEEeecCCCceeEEEeccC-CCCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCc
Q psy2902 541 QIEVTFDIDANGILHVTAKDKKTGKENKITIKAN-SGLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGE 610 (945)
Q Consensus 541 ~i~v~~~~d~~g~l~v~a~~~~~g~~~~~~i~~~-~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e 610 (945)
+|+|+|++|.||+|+|+|.+..+|++..++|..+ .+||++||++|+++++++..+|+..+++.+++|.+|
T Consensus 82 ~I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~I~~~~~~ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~le 152 (152)
T 3h0x_A 82 QIEVTFALDANGILKVSATDKGTGKSESITITNDKGRLTQEEIDRMVEEAEKFASEDASIKAKVESRNKLE 152 (152)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECCTTCCCHHHHHHHHHHHHHTHHHHHHHHHHHHCSCCCC
T ss_pred eEEEEEEEcCCCEEEEEEEEcCCCcEeEEEEecCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999976 579999999999999999999999999999999886
No 20
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.95 E-value=2e-27 Score=226.64 Aligned_cols=150 Identities=62% Similarity=0.963 Sum_probs=144.1
Q ss_pred EEeeccceeeEEEeCCEEEEEEecCCCccceeEEEeeecCCCCceEEEEEEecCcccccCCceEEEEEEcCCCCCCCCcC
Q psy2902 461 LLDVTPLSLGIETMGGIMTKMIKKNTTIPTKFSQVFSTAEDNQPAVTVKVYQGEREMVSGNKILGEFNLEGIPPALRGIP 540 (945)
Q Consensus 461 ~~~~~~~s~gi~~~~~~~~~li~~~~~iP~~~~~~~~~~~d~q~~~~i~iy~g~~~~~~~~~~lg~~~i~~~~~~~~~~~ 540 (945)
+.|++|+|+||++.+|.|.+||++|++||++++++|++..|+|+.+.|.||+|++..+.+|..||+|.|.++|+.|+|.+
T Consensus 2 ~~DV~p~slGie~~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~ 81 (151)
T 3dqg_A 2 NADVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAPRGVP 81 (151)
T ss_dssp --CBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCS
T ss_pred cceeeeeEEEEEEcCCEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCCCCCc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEECCCccEEEEEeecCCCceeEEEeccCCCCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCc
Q psy2902 541 QIEVTFDIDANGILHVTAKDKKTGKENKITIKANSGLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGE 610 (945)
Q Consensus 541 ~i~v~~~~d~~g~l~v~a~~~~~g~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e 610 (945)
+|+|+|++|.||+|+|+|.|..||++..++|..+.+||++||++|+++++++..+|+..+++.+++|.+|
T Consensus 82 ~IeVtf~iD~nGiL~Vsa~d~~tg~~~~i~I~~~~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~n~~e 151 (151)
T 3dqg_A 82 QVEVTFDIDANGIVNVSARDRGTGKEQQIVIQSSGGLSKDQIENMIKEAEKNAAEDAKRKELVEVINQAE 151 (151)
T ss_dssp CEEEEEEECTTSEEEEEEEETTTCCEEEEEEECSSSSCHHHHHHHHHHHHHHHHHHTTCCCEEECBCCCC
T ss_pred EEEEEEEeccCcEEEEEEEEccCCCEeEEEEecCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999988889999999999999999999999999999998875
No 21
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=99.94 E-value=2.5e-26 Score=236.43 Aligned_cols=181 Identities=43% Similarity=0.656 Sum_probs=172.6
Q ss_pred EeeccceeeEEEeCCEEEEEEecCCCccceeEEEeeecCCCCceEEEEEEecCcccccCCceEEEEEEcCCCCCCCCcCe
Q psy2902 462 LDVTPLSLGIETMGGIMTKMIKKNTTIPTKFSQVFSTAEDNQPAVTVKVYQGEREMVSGNKILGEFNLEGIPPALRGIPQ 541 (945)
Q Consensus 462 ~~~~~~s~gi~~~~~~~~~li~~~~~iP~~~~~~~~~~~d~q~~~~i~iy~g~~~~~~~~~~lg~~~i~~~~~~~~~~~~ 541 (945)
.|++|+++||++.+|.|.+||++|++||++++.+|++..|+|+.+.|.||||++..+.+|..||+|.|.++|+.|+|.++
T Consensus 1 ~Dv~p~slGie~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~G~~~ 80 (227)
T 1u00_A 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPAGGAH 80 (227)
T ss_dssp CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCSTTCSC
T ss_pred CCcccceEEEEEeCCEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCCCceE
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEECCCccEEEEEeecCCCceeEEEeccCCCCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhh
Q psy2902 542 IEVTFDIDANGILHVTAKDKKTGKENKITIKANSGLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLK 621 (945)
Q Consensus 542 i~v~~~~d~~g~l~v~a~~~~~g~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~ 621 (945)
|+|+|++|.||+|+|+|.+..+|+...++|..+.+||++||++++++++++..+|+..+++.+++|.+|+++|.+++.+.
T Consensus 81 I~Vtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~~~Ls~eei~~~~~~~~~~~~~D~~~~e~~e~kn~le~~i~~~~~~l~ 160 (227)
T 1u00_A 81 IRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALA 160 (227)
T ss_dssp EEEEEEECTTCCEEEEEEETTTCCEEEEEECCCSCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECCCCcEEEEeecccccccceEEEEeccCCCHHHHHHHHHHHHhhhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998888999999999999999999999999999999999999999999886
Q ss_pred hhhhhhccChhHHHHHHHHhccc
Q psy2902 622 IKEAYEVLSDSEKRIIYDQYGHA 644 (945)
Q Consensus 622 ~~~~~~~l~~~~k~~~~d~~~~~ 644 (945)
++.+.++++++.++.+.+.+.
T Consensus 161 --~~~~~~~~~~k~~i~~~l~~~ 181 (227)
T 1u00_A 161 --ADAALLSAAERQVIDDAAAHL 181 (227)
T ss_dssp --HHGGGSCHHHHHHHHHHHHHH
T ss_pred --hhhccCCHHHHHHHHHHHHHH
Confidence 366889999999998888654
No 22
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.93 E-value=8e-25 Score=211.19 Aligned_cols=150 Identities=57% Similarity=0.891 Sum_probs=143.6
Q ss_pred EEeeccceeeEEEeCCEEEEEEecCCCccceeEEEeeecCCCCceEEEEEEecCcccccCCceEEEEEEcCCCCCCCCcC
Q psy2902 461 LLDVTPLSLGIETMGGIMTKMIKKNTTIPTKFSQVFSTAEDNQPAVTVKVYQGEREMVSGNKILGEFNLEGIPPALRGIP 540 (945)
Q Consensus 461 ~~~~~~~s~gi~~~~~~~~~li~~~~~iP~~~~~~~~~~~d~q~~~~i~iy~g~~~~~~~~~~lg~~~i~~~~~~~~~~~ 540 (945)
+.|++|++|||++.+|.|.+||++|++||++++.+|++..|+|+.+.|.||||++..+.+|..||++.|.++|+.|+|.+
T Consensus 2 v~Dv~p~slGi~~~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~ 81 (152)
T 2op6_A 2 NADVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVP 81 (152)
T ss_dssp -CCBCSSCEEEEETTTEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCS
T ss_pred ceEeecccEEEEEeCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEECCCccEEEEEeecCCCceeEEEeccC-CCCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCc
Q psy2902 541 QIEVTFDIDANGILHVTAKDKKTGKENKITIKAN-SGLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGE 610 (945)
Q Consensus 541 ~i~v~~~~d~~g~l~v~a~~~~~g~~~~~~i~~~-~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e 610 (945)
+|+|+|++|.||+|+|+|.+..+|+...++|... .+||++||++++++++++..+|+..+++.+++|.+|
T Consensus 82 ~I~V~f~id~nGiL~V~a~d~~tg~~~~i~i~~~~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~kn~~e 152 (152)
T 2op6_A 82 QIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDADKFAADDQAQKEKVESRNELE 152 (152)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTCCEEEEEECSSSSCCCHHHHHHHHHHHHHTHHHHHHHHHHSCCCSEEC
T ss_pred eEEEEEEECCCcEEEEEEEEecCCcEEEEEeeccccCCCHHHHHHHHHHHHHhHhccHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999877 469999999999999999999999999999999875
No 23
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.92 E-value=7.6e-24 Score=227.66 Aligned_cols=205 Identities=25% Similarity=0.366 Sum_probs=174.4
Q ss_pred ChhhHHHHHHHHHHHHHHHHhCCCCCcEEEEcCCCCCHHHHHHHHHHHHHcCCccceecchhHHHHHHhccCCCCCCCce
Q psy2902 180 APPQISAEVLRKMKKTAEDYLGGEITEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAFGLDKSGKSDRN 259 (945)
Q Consensus 180 ~~~ev~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr~~l~~Aa~~AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~ 259 (945)
...+....+|+++++.++...+.....+++++|+.|+..+|++++++++.+|++...++.||+|++++++...
T Consensus 68 ~d~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~~------- 140 (272)
T 3h1q_A 68 VDYIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIND------- 140 (272)
T ss_dssp TTHHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCSS-------
T ss_pred EcHHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCCC-------
Confidence 4456677889999999988888888899999999999999999999999999999999999999999987643
Q ss_pred EEEEEeCCcceEEEEEEEEeecCCceEEEEEecCCCCCchHHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHH
Q psy2902 260 IVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRIIDYILDEFNKINGIDLRKDSIALQRIKASAERA 339 (945)
Q Consensus 260 vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~ 339 (945)
.+|+|+||||++++++.. +.+. ......+||.+||+.+.+++. .+ .+.++++
T Consensus 141 ~~viDiGggst~~~~~~~------g~~~---~~~~~~~Gg~~~~~~l~~~l~--------~~-----------~~~ae~~ 192 (272)
T 3h1q_A 141 GIVVDIGGGTTGIAVIEK------GKIT---ATFDEPTGGTHLSLVLAGSYK--------IP-----------FEEAETI 192 (272)
T ss_dssp EEEEEECSSCEEEEEEET------TEEE---EECCBSCCHHHHHHHHHHHHT--------CC-----------HHHHHHH
T ss_pred EEEEEECCCcEEEEEEEC------CEEE---EEecCCCcHHHHHHHHHHHhC--------CC-----------HHHHHHH
Confidence 599999999999999863 2221 235678999999999988763 11 4578888
Q ss_pred HHHhcCCcceeeeeceeeccCCCCeEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcEEEecCccccHHH
Q psy2902 340 KIELSSSKQTEINEPYIAMSNGAPVHLNLKITRAKLELLVDELITRTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKV 419 (945)
Q Consensus 340 K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v 419 (945)
|+.++ +++++++++.+.++++.+.+.+.++..+ +++.|+|+||+|++|.+
T Consensus 193 k~~~~--------------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l 242 (272)
T 3h1q_A 193 KKDFS--------------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGF 242 (272)
T ss_dssp HHSST--------------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTH
T ss_pred HHhcC--------------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhH
Confidence 88765 5789999999999999999999988764 36899999999999999
Q ss_pred HHHHHHHhCCCCCCCCCCCchhhhhHHHhh
Q psy2902 420 QEKVKEFFGKDPRRDINPDEAVAVGAAIQG 449 (945)
Q Consensus 420 ~~~l~~~fg~~~~~~~~p~~avA~GAa~~a 449 (945)
++++++.|+.++..+.+|++++|+|||++|
T Consensus 243 ~~~l~~~l~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 243 SEEFSRFLGKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp HHHHHHHHSSCCBCCSSGGGHHHHHHHTTC
T ss_pred HHHHHHHhCCCccccCChHHHHHHHHHhcC
Confidence 999999999999889999999999999875
No 24
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.91 E-value=2e-25 Score=247.14 Aligned_cols=230 Identities=18% Similarity=0.155 Sum_probs=168.1
Q ss_pred CCeeeChhhHHHHHHHHHHHHHHHHhCCCCCcEE--EEcCCCCCHHHHHHHHHHHHHc--------C------Cccceec
Q psy2902 175 RGKKLAPPQISAEVLRKMKKTAEDYLGGEITEAV--ITVPAYFNDAQRQATKDAGRIA--------G------LEVKRII 238 (945)
Q Consensus 175 ~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~V--itVPa~~~~~qr~~l~~Aa~~A--------G------l~~v~li 238 (945)
.+..+.++...++++..|+..++..... ..++| ++||++|++.||+++++|+..+ | +..+.++
T Consensus 91 ~~~~~~~~~~~~ll~~~l~~~~~~~~~~-~~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li 169 (346)
T 2fsj_A 91 GDGRLASKEAFPLIAAALWESGIHNDGS-PVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMR 169 (346)
T ss_dssp STTCTTSTTTHHHHHHHHHHHCCCC----CEEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEE
T ss_pred CCCcccChhHHHHHHHHHHHhhhccCCC-ceEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEE
Confidence 3445566677777777777654222222 35699 9999999999999999997765 4 3568899
Q ss_pred chhHHHHHHhccCCC-CCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEecCCCCCchHHHHHHHHHHHHHHHHHH
Q psy2902 239 NEPTAAALAFGLDKS-GKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRIIDYILDEFNKI 317 (945)
Q Consensus 239 ~Ep~AAAl~~~~~~~-~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~~~lGG~~iD~~l~~~l~~~~~~~ 317 (945)
+||+|||++|..... ......++|||+||||||++++++ .++. .+....++..+||.++++.|.+++.+++.
T Consensus 170 ~Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~----~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~~g-- 242 (346)
T 2fsj_A 170 PQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINL----MDME-PVVELSFSLQIGVGDAISALSRKIAKETG-- 242 (346)
T ss_dssp ETTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEET----TTTE-ECGGGCEEESCCHHHHHHHHHHHHHHHHC--
T ss_pred ccHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEe----cCCE-EEeecCCCcchhHHHHHHHHHHHHHHHhC--
Confidence 999999998822111 123477999999999999999986 4554 45544567789999999999988777654
Q ss_pred hCC--CCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeeccCCCCeEEEEEEcHHHH-HHHHHHHHHHHHHHHHHHH
Q psy2902 318 NGI--DLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSNGAPVHLNLKITRAKL-ELLVDELITRTIEPCRIAI 394 (945)
Q Consensus 318 ~~~--~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~~-e~~~~~~i~~i~~~i~~~l 394 (945)
. .+. ...+| ....+.+. + -.++++++ +++++++++++.+.+++.|
T Consensus 243 --~~~~i~---------~~~~e---------~~~~~~~~-------g-----~~~~~~~i~~~~i~~~~~~i~~~i~~~l 290 (346)
T 2fsj_A 243 --FVVPFD---------LAQEA---------LSHPVMFR-------Q-----KQVGGPEVSGPILEDLANRIIENIRLNL 290 (346)
T ss_dssp --CCCCHH---------HHHHH---------TTSCEEET-------T-----EEECSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCcCCC---------HHHHh---------cCCeEeEC-------C-----ccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 211 11122 11112211 0 13558999 9999999999999999999
Q ss_pred HHcCCCCCCCCcEEEecCccccHHHHHHHHHHhCCCCCC---CCCCCchhhhhHHHhhh
Q psy2902 395 KDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRR---DINPDEAVAVGAAIQGS 450 (945)
Q Consensus 395 ~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~~~~---~~~p~~avA~GAa~~a~ 450 (945)
+++ ..+++.|+|+||+|++ +++.+++.|+. +.. ..||++|+|.|+..++.
T Consensus 291 ~~~---~~~i~~IvL~GGga~l--l~~~l~~~~~~-~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 291 RGE---VDRVTSLIPVGGGSNL--IGDRFEEIAPG-TLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp GGG---GGGEEEEEEESTTHHH--HGGGGGGGSTT-CBCCCCTTTTTTHHHHHHHHHHH
T ss_pred Hhh---hhcccEEEEECCcHHH--HHHHHHHHCcC-cEEeccCCCcHHHHHHHHHHHHh
Confidence 876 4467999999999999 99999999973 334 67999999999998764
No 25
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.90 E-value=2.1e-24 Score=243.63 Aligned_cols=301 Identities=15% Similarity=0.170 Sum_probs=190.4
Q ss_pred eEEEEcCccceEEEEEeCCceEEEeCCCCCcCccEEEEEeeCCcEEecHHHHHhhhhCCCchhHHHHHhhCCCCCcHHHH
Q psy2902 73 IIGIDLGTTNSCVSIIEGSQPKVIENSEGARTTPSVIAYQENGEILVGAPAKRQAVTNPKNTIYAAKRLIGRKFNEKEVQ 152 (945)
Q Consensus 73 viGID~GTt~s~va~~~~~~~~ii~~~~g~~~~Ps~v~~~~~~~~~~G~~A~~~~~~~~~~~i~~~k~llg~~~~~~~~~ 152 (945)
++|||+||++++++++.++.+.+. ..|...+|+... .+| ...++..+...+++++++.
T Consensus 15 ~vgiDiGt~~i~~~~~~~~~~~i~--~~g~~~~ps~~~--~~g-----------~i~d~~~~~~~ik~~~~~~------- 72 (377)
T 2ych_A 15 ALGLEIGASALKLVEVSGNPPALK--ALASRPTPPGLL--MEG-----------MVAEPAALAQEIKELLLEA------- 72 (377)
T ss_dssp CEEEEECSSEEEEEEEETTTTEEE--EEEEEECCTTSE--ETT-----------EESCHHHHHHHHHHHHHHH-------
T ss_pred eEEEEeCCCeEEEEEEeCCceEEE--EEEeEECCCCcc--cCC-----------CcCCHHHHHHHHHHHHHHc-------
Confidence 799999999999999876655442 223334444322 122 2345666777788877530
Q ss_pred hhhcCCCeeEEecCCCceEEEECCeeeChhhHHHHHHHHHHHHHHHHhCCCCCcEEEEcCCCCCH---------------
Q psy2902 153 KDISLMPYKIVKADNGDAWISVRGKKLAPPQISAEVLRKMKKTAEDYLGGEITEAVITVPAYFND--------------- 217 (945)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~--------------- 217 (945)
........+...........+....++++++... +...++.+++.++.+++|.+|..=..
T Consensus 73 -~~~~~~v~~~i~~~~~~~~~~~~~~v~~~el~~~----i~~ea~~~~~~~~~~~vid~~~~~~~~~~~~~~~~~v~~va 147 (377)
T 2ych_A 73 -RTRKRYVVTALSNLAVILRPIQVPKMPLKEMEEA----VRWEAERYIPFPIDEVVLDFAPLTPLSEVQEGEQVQVMVAA 147 (377)
T ss_dssp -TCCCCEEEEEECGGGCEEEEEEEECCCHHHHHHH----HHHHHGGGCSSCC-CEEEEEEESSCGGGSCTTSEEEEEEEE
T ss_pred -CCCcceEEEEecCCcEEEEEEECCCCCHHHHHHH----HHHHHhhcCCCChhHceEEEEEeCCCCCCCCcceeEEEEEE
Confidence 0000000011111111111122245677776543 45677888888899999998731111
Q ss_pred ---HHHHHHHHHHHHcCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEecCC
Q psy2902 218 ---AQRQATKDAGRIAGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGD 294 (945)
Q Consensus 218 ---~qr~~l~~Aa~~AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~ 294 (945)
...+.+.+|++.|||++..++.||+|||++|+.......+..++|+|+||||+|+++++. +.+. ..++
T Consensus 148 ~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~------g~~~---~~~~ 218 (377)
T 2ych_A 148 ARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRG------DKPL---AVRV 218 (377)
T ss_dssp EEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEET------TEEE---EEEE
T ss_pred ecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEEC------CEEE---EEEe
Confidence 124889999999999999999999999999864322234567999999999999999974 2221 2345
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeeccCCCCeEEEEEEcHHH
Q psy2902 295 TFLGGEDFDQRIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSNGAPVHLNLKITRAK 374 (945)
Q Consensus 295 ~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~ 374 (945)
..+||.+||+.|.+. ++.+ ..+||++|+.++.............. . ......+++++
T Consensus 219 ~~~GG~~i~~~i~~~--------~~~~-----------~~~aE~~K~~~~~~~~~~~~~~~~i~-~---~~~~~~i~~~~ 275 (377)
T 2ych_A 219 LTLSGKDFTEAIARS--------FNLD-----------LLAAEEVKRTYGMATLPTEDEELLLD-F---DAERERYSPGR 275 (377)
T ss_dssp ESCSHHHHHHHHHHH--------TTCC-----------HHHHHHHHHHTC-----------------------------C
T ss_pred eechHHHHHHHHHHH--------hCCC-----------HHHHHHHHhhcccccccccccccccc-c---ccccccCCHHH
Confidence 678999999998862 2222 46889999998864322111000000 0 02346789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH--cCCCCCCCCcEEEecCccccHHHHHHHHHHhCCCCC
Q psy2902 375 LELLVDELITRTIEPCRIAIKD--AGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPR 432 (945)
Q Consensus 375 ~e~~~~~~i~~i~~~i~~~l~~--~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~~~ 432 (945)
+++++++.++++...|.+.|+. ++.....++.|+|+||+|++|.+++.+++.|+.++.
T Consensus 276 ~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~ 335 (377)
T 2ych_A 276 IYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLE 335 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeE
Confidence 9999999999999999999985 345556789999999999999999999999987654
No 26
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.90 E-value=2.3e-23 Score=234.12 Aligned_cols=297 Identities=13% Similarity=0.102 Sum_probs=196.4
Q ss_pred eEEEEcCccceEEEEEeCCceEEEeCCCCCcCccEEEEEeeC---------CcEEecHHHHHhhhhCCCchhHHHHHhhC
Q psy2902 73 IIGIDLGTTNSCVSIIEGSQPKVIENSEGARTTPSVIAYQEN---------GEILVGAPAKRQAVTNPKNTIYAAKRLIG 143 (945)
Q Consensus 73 viGID~GTt~s~va~~~~~~~~ii~~~~g~~~~Ps~v~~~~~---------~~~~~G~~A~~~~~~~~~~~i~~~k~llg 143 (945)
.|+||+||+++++++..++.|..+ +||+++.... ...++|.+|.... .. .
T Consensus 7 ~ivID~Gs~~~k~G~~~~~~p~~~--------~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~----~~--~------- 65 (375)
T 2fxu_A 7 ALVCDNGSGLVKAGFAGDDAPRAV--------FPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR----GI--L------- 65 (375)
T ss_dssp CEEEEECSSEEEEEETTCSSCSEE--------EECCEEEECTTTC-------CCEEHHHHHHHT----TS--E-------
T ss_pred eEEEECCCCeEEEEECCCCCCcee--------eccccccccccccccCCCCCCeEechhHhhcC----cc--c-------
Confidence 599999999999999876666433 2555544322 2457788776431 00 0
Q ss_pred CCCCcHHHHhhhcCCCeeEEecCCCceEEEECCeeeChhhHHHHHHHHHHHHHHHHhCCC--CCcEEEEcCCCCCHHHHH
Q psy2902 144 RKFNEKEVQKDISLMPYKIVKADNGDAWISVRGKKLAPPQISAEVLRKMKKTAEDYLGGE--ITEAVITVPAYFNDAQRQ 221 (945)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~--~~~~VitVPa~~~~~qr~ 221 (945)
....++....+...+.+..+++++.. ..++.. ...++||+|++++..+|+
T Consensus 66 -------------------------~~~~Pi~~G~i~d~d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r~ 117 (375)
T 2fxu_A 66 -------------------------TLKYPIEHGIITNWDDMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKANRE 117 (375)
T ss_dssp -------------------------EEECSEETTEECCHHHHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHHHH
T ss_pred -------------------------ceeccccCCcccCHHHHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHHHH
Confidence 01112223334455666666666653 233333 346999999999999999
Q ss_pred HHHHHH-HHcCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEecCCCCCchH
Q psy2902 222 ATKDAG-RIAGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGE 300 (945)
Q Consensus 222 ~l~~Aa-~~AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~~~lGG~ 300 (945)
++.+++ +.+|++.+.+++||.|||++++. .+.+|||+|+||||++.+.- +. .+........+||+
T Consensus 118 ~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~-------~~~lVvDiG~gtt~v~~v~~------G~-~~~~~~~~~~~GG~ 183 (375)
T 2fxu_A 118 KMTQIMFETFNVPAMYVAIQAVLSLYASGR-------TTGIVLDSGDGVTHNVPIYE------GY-ALPHAIMRLDLAGR 183 (375)
T ss_dssp HHHHHHHHTTCCSEEEEEEHHHHHHHHTTC-------SSEEEEEECSSCEEEEEEET------TE-ECGGGCEEESCCHH
T ss_pred HHHHHHHHhcCcceEEEccchheeeeecCC-------CeEEEEEcCCCceEEeEeEC------CE-EeccceEEeccCHH
Confidence 888765 78899999999999999999975 35899999999999988752 32 22222344678999
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCC----------------cceeeeeceeeccCCCCe
Q psy2902 301 DFDQRIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSS----------------KQTEINEPYIAMSNGAPV 364 (945)
Q Consensus 301 ~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~----------------~~~~i~i~~~~~~~~~~~ 364 (945)
++|+.|.+++..+. ..+.. .. -...+|++|+.++.. ....+.+|.
T Consensus 184 ~lt~~l~~~l~~~~-----~~~~~-~~----~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~lpd--------- 244 (375)
T 2fxu_A 184 DLTDYLMKILTERG-----YSFVT-TA----EREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPD--------- 244 (375)
T ss_dssp HHHHHHHHHHHHHT-----CCCCS-HH----HHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECTT---------
T ss_pred HHHHHHHHHHHhcC-----CCCCc-HH----HHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEECCC---------
Confidence 99999999998751 11110 00 123455556555432 222233321
Q ss_pred EEEEEEcHHHHH---HHHHHH-----HHHHHHHHHHHHHHcCCC--CCCCCcEEEecCccccHHHHHHHHHHhC------
Q psy2902 365 HLNLKITRAKLE---LLVDEL-----ITRTIEPCRIAIKDAGIK--VSDINDIILVGGMTRMPKVQEKVKEFFG------ 428 (945)
Q Consensus 365 ~~~~~itr~~~e---~~~~~~-----i~~i~~~i~~~l~~~~~~--~~~i~~ViLvGG~s~~p~v~~~l~~~fg------ 428 (945)
+..+.++++.|. .++.|. ...+.++|.+.|..+... ...++.|+|+||+|++|.+.++|++.++
T Consensus 245 g~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~ 324 (375)
T 2fxu_A 245 GQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPST 324 (375)
T ss_dssp SCEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTT
T ss_pred CCEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCC
Confidence 235788888773 334442 244677777777765321 2235789999999999999999999875
Q ss_pred --CCCCCCCCCCchhhhhHHHhhhh
Q psy2902 429 --KDPRRDINPDEAVAVGAAIQGSV 451 (945)
Q Consensus 429 --~~~~~~~~p~~avA~GAa~~a~~ 451 (945)
.++....+|..++++||+++|..
T Consensus 325 ~~v~v~~~~~p~~~~w~G~si~a~l 349 (375)
T 2fxu_A 325 MKIKIIAPPERKYSVWIGGSILASL 349 (375)
T ss_dssp CCCCEECCTTTTSHHHHHHHHHHHC
T ss_pred eeEEEEcCCCCCccEEcchHHhhCc
Confidence 23335678999999999999973
No 27
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.90 E-value=1.7e-23 Score=187.40 Aligned_cols=103 Identities=30% Similarity=0.608 Sum_probs=93.9
Q ss_pred ecCCcccccCCCceeEEeeCHHHHhcCCeEEEecCCCeEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEEEECC
Q psy2902 826 KPHKVFERDGDDLHYEMPISFSTAALGGEIEAPTLNGKAFFVIPEGTQSGKIFRLRGKGIKNIRSSIPGDLFCHVTIETP 905 (945)
Q Consensus 826 ~~~~~~~r~g~dl~~~~~i~l~eal~G~~~~v~~l~g~~~~~i~~~~~~g~~~~i~g~G~~~~~~~~~Gdl~v~~~i~~p 905 (945)
++|+.|+|+|+||+++++|+|.||++|++++|+|+||...+.||+++++|+++||+|+|||. .+ .+|||||+|+|.||
T Consensus 2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~~~v~ip~g~~~G~~~rl~G~G~p~-~~-~~GDL~v~~~V~~P 79 (109)
T 3i38_A 2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLTVPPGSQAGQRLRIKGKGLVS-KT-HTGDLFAVIKIVMP 79 (109)
T ss_dssp --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEEECTTCCTTCEEEETTCSCBC-SS-CBCCEEEEEEECCC
T ss_pred CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCCEEEeeCCCcCcCeEEEECCccCCC-CC-CCcCEEEEEEEECC
Confidence 58999999999999999999999999999999999999999999999999999999999998 33 78999999999999
Q ss_pred CCCCHHHHHHHHHHHHhhhcCCCCCCCcc
Q psy2902 906 VQLTEYQKKLLRSLETSILEGGFKHNPRT 934 (945)
Q Consensus 906 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (945)
+.||++|+++|+++++... .++||.
T Consensus 80 ~~Ls~~q~~~l~~l~~~~~----~~~~~~ 104 (109)
T 3i38_A 80 TKPDEKARELWQQLAAAEA----SFDPRK 104 (109)
T ss_dssp SSCCHHHHHHHHHHHHHTT----TCCTTC
T ss_pred CCCCHHHHHHHHHHHhhcc----ccCccc
Confidence 9999999999999998742 456664
No 28
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.89 E-value=5.2e-23 Score=235.10 Aligned_cols=308 Identities=17% Similarity=0.170 Sum_probs=202.1
Q ss_pred eEEEEcCccceEEEEEeCCceEEEeCCCCCcCccEEEEEeeCC-----------------cEEecHHHHHhhhhCCCchh
Q psy2902 73 IIGIDLGTTNSCVSIIEGSQPKVIENSEGARTTPSVIAYQENG-----------------EILVGAPAKRQAVTNPKNTI 135 (945)
Q Consensus 73 viGID~GTt~s~va~~~~~~~~ii~~~~g~~~~Ps~v~~~~~~-----------------~~~~G~~A~~~~~~~~~~~i 135 (945)
.|+||+||+++++++..++.|..+ +||+++..... ..++|.+|... +
T Consensus 7 ~ivID~Gs~~~k~G~~~~~~p~~~--------~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~a~~~----~---- 70 (418)
T 1k8k_A 7 ACVVDCGTGYTKLGYAGNTEPQFI--------IPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIGDEAIEK----P---- 70 (418)
T ss_dssp CEEEEECSSEEEEEETTCSSCSEE--------EESCEEECC-----------CCCTTGGGCEEEGGGGTSC----T----
T ss_pred eEEEECCCCeEEEeeCCCCCCCCc--------CCceEEEECcccccccccccccccccccCeEEChHHHhc----C----
Confidence 699999999999999866666433 47777664321 14455444321 0
Q ss_pred HHHHHhhCCCCCcHHHHhhhcCCCeeEEecCCCceEEEECCeeeChhhHHHHHHHHHHHHHHHHhCCC--CCcEEEEcCC
Q psy2902 136 YAAKRLIGRKFNEKEVQKDISLMPYKIVKADNGDAWISVRGKKLAPPQISAEVLRKMKKTAEDYLGGE--ITEAVITVPA 213 (945)
Q Consensus 136 ~~~k~llg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~--~~~~VitVPa 213 (945)
+-.....+....+...+....++.++.. ..+... ...++||+|+
T Consensus 71 -------------------------------~~~~~~pi~~G~i~d~d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~ 116 (418)
T 1k8k_A 71 -------------------------------TYATKWPIRHGIVEDWDLMERFMEQVIF---KYLRAEPEDHYFLLTEPP 116 (418)
T ss_dssp -------------------------------TSEEECCEETTEESCHHHHHHHHHHHHH---TTTCCCGGGCCEEEEECT
T ss_pred -------------------------------CCEEeccccCCEECCHHHHHHHHHHHHH---hccCCCCCCCcEEEEeCC
Confidence 0011122333334445555556666553 233322 4579999999
Q ss_pred CCCHHHHHHHHHHH-HHcCCccceecchhHHHHHH-hccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEe
Q psy2902 214 YFNDAQRQATKDAG-RIAGLEVKRIINEPTAAALA-FGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLST 291 (945)
Q Consensus 214 ~~~~~qr~~l~~Aa-~~AGl~~v~li~Ep~AAAl~-~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~ 291 (945)
+|+..+|++|.+++ +.+|++.+.+++||+|||++ |........+.+.+|||+|+||||++++.- +. .+...
T Consensus 117 ~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~~~~glVvDiG~gtt~v~~v~~------G~-~~~~~ 189 (418)
T 1k8k_A 117 LNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAE------GY-VIGSC 189 (418)
T ss_dssp TCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSCCCCEEEEEESSSCEEEEEEET------TE-ECGGG
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCCCCeEEEEEcCCCceEEEEeEC------CE-Ecccc
Confidence 99999999999999 88999999999999999988 421111011236799999999999999852 22 12222
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcc-----------------eeeeec
Q psy2902 292 NGDTFLGGEDFDQRIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQ-----------------TEINEP 354 (945)
Q Consensus 292 ~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~-----------------~~i~i~ 354 (945)
.....+||.++|+.|.++|.+++. ...... -...+|++|+.++.... ..+.+|
T Consensus 190 ~~~~~lGG~~lt~~l~~~l~~~~~---~~~~~~-------~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~~lp 259 (418)
T 1k8k_A 190 IKHIPIAGRDITYFIQQLLRDREV---GIPPEQ-------SLETAKAVKERYSYVCPDLVKEFNKYDTDGSKWIKQYTGI 259 (418)
T ss_dssp CEEESCSHHHHHHHHHHHHHTTCC---CCCGGG-------HHHHHHHHHHHHCCCCSCHHHHHHHHHHSGGGTCEEEEEE
T ss_pred eEEEeCcHHHHHHHHHHHHHhcCC---CCCCHH-------HHHHHHHHHHhhchhcccHHHHHHhhcccccccceeEECC
Confidence 245678999999999999876532 111111 13567888888765321 122222
Q ss_pred eeeccCCCCeEEEEEEcHHHH---HHHHHHH------HHHHHHHHHHHHHHcCC--CCCCCCcEEEecCccccHHHHHHH
Q psy2902 355 YIAMSNGAPVHLNLKITRAKL---ELLVDEL------ITRTIEPCRIAIKDAGI--KVSDINDIILVGGMTRMPKVQEKV 423 (945)
Q Consensus 355 ~~~~~~~~~~~~~~~itr~~~---e~~~~~~------i~~i~~~i~~~l~~~~~--~~~~i~~ViLvGG~s~~p~v~~~l 423 (945)
+........+.+++++| |.++.|. +..+.+.|.+.|..+.. ....++.|+|+||+|++|.+++.|
T Consensus 260 ----d~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~pg~~~rl 335 (418)
T 1k8k_A 260 ----NAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRL 335 (418)
T ss_dssp ----CTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCSTTHHHHH
T ss_pred ----CCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCccccccHHHHH
Confidence 11112355789999998 4444443 24678888888887653 234568899999999999999999
Q ss_pred HHHhCC------------------------CCCCCCCCCchhhhhHHHhhhh
Q psy2902 424 KEFFGK------------------------DPRRDINPDEAVAVGAAIQGSV 451 (945)
Q Consensus 424 ~~~fg~------------------------~~~~~~~p~~avA~GAa~~a~~ 451 (945)
++.++. .+..+.+|..++.+||+++|..
T Consensus 336 ~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 336 QRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred HHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 876532 1122456789999999999974
No 29
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.89 E-value=2.9e-22 Score=226.34 Aligned_cols=199 Identities=15% Similarity=0.114 Sum_probs=155.4
Q ss_pred HHHHHHHHHHHHHcCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEecCCCC
Q psy2902 217 DAQRQATKDAGRIAGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTF 296 (945)
Q Consensus 217 ~~qr~~l~~Aa~~AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~~~ 296 (945)
....+.+.+|++.|||++..++.||.|||++++... .....++|+|+||||||++++.- +.+.. .+...
T Consensus 167 ~~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~--~~~~gv~vvDiGggttdisi~~~------g~~~~---~~~i~ 235 (419)
T 4a2a_A 167 LKVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTP--EKDRGVVVVNLGYNFTGLIAYKN------GVPIK---ISYVP 235 (419)
T ss_dssp HHHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHH--HHHHCEEEEEECSSSEEEEEEET------TEEEE---EEEES
T ss_pred HHHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhccc--cccCCEEEEEECCCcEEEEEEEC------CEEEE---EEecc
Confidence 346788999999999999999999999999986543 33457999999999999999973 33322 23467
Q ss_pred CchHHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCC-----cceeeeeceeeccCCCCeEEEEEEc
Q psy2902 297 LGGEDFDQRIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSS-----KQTEINEPYIAMSNGAPVHLNLKIT 371 (945)
Q Consensus 297 lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~-----~~~~i~i~~~~~~~~~~~~~~~~it 371 (945)
+||++||+.|.+.+. . ..++||++|+.++.. ....+.++... + .....++
T Consensus 236 ~GG~~it~dIa~~l~--------~-----------~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~----~--~~~~~is 290 (419)
T 4a2a_A 236 VGMKHVIKDVSAVLD--------T-----------SFEESERLIITHGNAVYNDLKEEEIQYRGLD----G--NTIKTTT 290 (419)
T ss_dssp CCHHHHHHHHHHHHT--------C-----------CHHHHHHHHHHHCCSCCTTCCCCEEEEECTT----S--CSEEEEE
T ss_pred cHHHHHHHHHHHHHC--------C-----------CHHHHHHHHHHhccCcccCCCCceEEEeecC----C--ccceEEc
Confidence 899999999986532 1 156899999999753 23345554432 1 3467999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCC------CCCCCCcEEEecCccccHHHHHHHHHHhCCCCC--C-----C----
Q psy2902 372 RAKLELLVDELITRTIEPCRIAIKDAGI------KVSDINDIILVGGMTRMPKVQEKVKEFFGKDPR--R-----D---- 434 (945)
Q Consensus 372 r~~~e~~~~~~i~~i~~~i~~~l~~~~~------~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~~~--~-----~---- 434 (945)
|++|+++++|.++++.+.+.+.|+.++. ....++.|+|+||+|++|.+++++++.|+.++. . +
T Consensus 291 ~~~l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~~~~~~p~~~~ 370 (419)
T 4a2a_A 291 AKKLSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANSDRPSII 370 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECCGGGSSSCCCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEecCCCCchhcc
Confidence 9999999999999999999999999987 344689999999999999999999999987653 2 1
Q ss_pred ------CCCCchhhhhHHHhhhh
Q psy2902 435 ------INPDEAVAVGAAIQGSV 451 (945)
Q Consensus 435 ------~~p~~avA~GAa~~a~~ 451 (945)
.+|..++|.|.++++..
T Consensus 371 ~~~~~~~~P~~~t~~Gl~~~~~~ 393 (419)
T 4a2a_A 371 NADEVANDPSFAAAFGNVFAVSE 393 (419)
T ss_dssp TCHHHHTCGGGHHHHHTTCC---
T ss_pred CcccccCCchHHHHHHHHHHHhh
Confidence 47899999999998864
No 30
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.84 E-value=3.9e-21 Score=176.02 Aligned_cols=93 Identities=32% Similarity=0.418 Sum_probs=83.6
Q ss_pred cccccCCCceeEEeeCHHHHhcCCeEEEecCCCe-EEEEeCCC--CCCCcEEEECCCCcCCCCCCCCccEEEEEEEECCC
Q psy2902 830 VFERDGDDLHYEMPISFSTAALGGEIEAPTLNGK-AFFVIPEG--TQSGKIFRLRGKGIKNIRSSIPGDLFCHVTIETPV 906 (945)
Q Consensus 830 ~~~r~g~dl~~~~~i~l~eal~G~~~~v~~l~g~-~~~~i~~~--~~~g~~~~i~g~G~~~~~~~~~Gdl~v~~~i~~p~ 906 (945)
.|+|+|+||+++++|+|.||++|++++|+||||+ ..+.||+| +++|+++||+|+|||..+++.+|||||+|+|.||+
T Consensus 1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~ 80 (121)
T 1xao_A 1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPE 80 (121)
T ss_dssp CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCC
T ss_pred CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCC
Confidence 4899999999999999999999999999999996 78999999 99999999999999986554689999999999999
Q ss_pred C--CCHHHHHHHHHHHHh
Q psy2902 907 Q--LTEYQKKLLRSLETS 922 (945)
Q Consensus 907 ~--l~~~~~~~~~~~~~~ 922 (945)
. ||++|+++|++++..
T Consensus 81 ~~~ls~~q~~~l~~l~~~ 98 (121)
T 1xao_A 81 NHFTSEENLKKLEEILPP 98 (121)
T ss_dssp TTCSCHHHHHHHHHHSCC
T ss_pred CCCCCHHHHHHHHHHccc
Confidence 9 999999999999865
No 31
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.83 E-value=1.3e-20 Score=176.41 Aligned_cols=121 Identities=73% Similarity=1.050 Sum_probs=110.3
Q ss_pred CCceEEEeeccceeeEEEeCCEEEEEEecCCCccceeEEEeeecCCCCceEEEEEEecCcccccCCceEEEEEEcCCCCC
Q psy2902 456 RKDLLLLDVTPLSLGIETMGGIMTKMIKKNTTIPTKFSQVFSTAEDNQPAVTVKVYQGEREMVSGNKILGEFNLEGIPPA 535 (945)
Q Consensus 456 ~~~~~~~~~~~~s~gi~~~~~~~~~li~~~~~iP~~~~~~~~~~~d~q~~~~i~iy~g~~~~~~~~~~lg~~~i~~~~~~ 535 (945)
.+++.+.|++|++|||++.++.|.+||++|++||++++.+|++..|+|+.+.|.||||++..+.+|..||++.|.++|+.
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~ 93 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPA 93 (135)
T ss_dssp -------CCCSSCCCEEETTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCCCCSC
T ss_pred eCcEEEEEeecCcEEEEEECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeCCCCC
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCeEEEEEEECCCccEEEEEeecCCCceeEEEeccCCC
Q psy2902 536 LRGIPQIEVTFDIDANGILHVTAKDKKTGKENKITIKANSG 576 (945)
Q Consensus 536 ~~~~~~i~v~~~~d~~g~l~v~a~~~~~g~~~~~~i~~~~~ 576 (945)
|+|.++|+|+|++|.||+|+|+|.|..+|+..+++|+.+.+
T Consensus 94 p~G~~~IeVtf~iD~nGiL~V~a~d~~tg~~~~i~i~~~~~ 134 (135)
T 1q5l_A 94 PRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG 134 (135)
T ss_dssp CSSSCCEEEEEEECTTSEEEEEEEETTTCCEEEEEEECSCC
T ss_pred CCceeEEEEEEEECCCCEEEEEEEECCCCCEEEEEEecCCC
Confidence 99999999999999999999999999999999999987644
No 32
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.79 E-value=8.2e-20 Score=200.55 Aligned_cols=225 Identities=15% Similarity=0.166 Sum_probs=145.2
Q ss_pred eeChhhHHHHHHHHHHHHHHHHhCCCCCcEEEEcCCC-CCHH--HH--HHHHHH------------HHHcCCccceecch
Q psy2902 178 KLAPPQISAEVLRKMKKTAEDYLGGEITEAVITVPAY-FNDA--QR--QATKDA------------GRIAGLEVKRIINE 240 (945)
Q Consensus 178 ~~~~~ev~a~~L~~l~~~a~~~~~~~~~~~VitVPa~-~~~~--qr--~~l~~A------------a~~AGl~~v~li~E 240 (945)
.+++..+++.+ ..|+. +. ..+. ...+|+++|.. |... |+ +++.+- .+.+++..+.+++|
T Consensus 73 ~~~~~~l~~i~-~aL~~-~~-~~~~-~~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~e 148 (320)
T 2zgy_A 73 QYSDVNVVAVH-HALLT-SG-LPVS-EVDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMPE 148 (320)
T ss_dssp GGSHHHHHHHH-HHHHH-HS-CCSC-EEEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEES
T ss_pred cchHHHHHHHH-HHHHH-cC-CCCc-eEEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEecC
Confidence 45666665543 33332 21 1111 23689999987 6431 21 222211 23345677889999
Q ss_pred hHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEecCCCCCchHHHHHHHHHHHHHHHHHHhCC
Q psy2902 241 PTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRIIDYILDEFNKINGI 320 (945)
Q Consensus 241 p~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~ 320 (945)
|.||++++.... ..+..++|+|+||||+|+++++- +...+....++..+||.+||+.|.+++.++ +.
T Consensus 149 ~~aa~~~~~~~~--~~~~~~~vvDiGggttd~~v~~~------g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~-----~~ 215 (320)
T 2zgy_A 149 SIPAGYEVLQEL--DELDSLLIIDLGGTTLDISQVMG------KLSGISKIYGDSSLGVSLVTSAVKDALSLA-----RT 215 (320)
T ss_dssp SHHHHHHHHHHS--CTTCEEEEEEECSSCEEEEEEEG------GGCCEEEEEEECSCCTHHHHHHHHHHTTCC-----SB
T ss_pred cHHHHHhhhccc--cCCCCEEEEEcCCCeEEEEEEeC------CeeEEeeecCCccccHHHHHHHHHHHHHHc-----CC
Confidence 999999886432 34678999999999999999972 333444456677899999999999888642 21
Q ss_pred CCccCHHHHHHHHHHHHHH-HHHhcC-CcceeeeeceeeccCCCCeEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q psy2902 321 DLRKDSIALQRIKASAERA-KIELSS-SKQTEINEPYIAMSNGAPVHLNLKITRAKLELLVDELITRTIEPCRIAIKDAG 398 (945)
Q Consensus 321 ~~~~~~~~~~~L~~~~e~~-K~~Ls~-~~~~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~~~i~~i~~~i~~~l~~~~ 398 (945)
++ + ...+|++ |..-.. .....+.. .-..+++.+++++.++++.+.+.+.+++.
T Consensus 216 ~i--~-------~~~ae~~lk~~~~~~~~~~~i~~---------------~~~~~~~~~~i~~~~~~~~~~i~~~i~~~- 270 (320)
T 2zgy_A 216 KG--S-------SYLADDIIIHRKDNNYLKQRIND---------------ENKISIVTEAMNEALRKLEQRVLNTLNEF- 270 (320)
T ss_dssp GG--G-------HHHHHHHHHTTTCHHHHHHHSSS---------------SCTHHHHHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred CC--C-------HHHHHHHHHHhhhhhcccceecC---------------chhhHHHHHHHHHHHHHHHHHHHHHHHhh-
Confidence 11 1 1234444 322000 00000100 01345666677777777777776666552
Q ss_pred CCCCCCCcEEEecCccccHHHHHHHHHHhCC---CCCCCCCCCchhhhhHHHhh
Q psy2902 399 IKVSDINDIILVGGMTRMPKVQEKVKEFFGK---DPRRDINPDEAVAVGAAIQG 449 (945)
Q Consensus 399 ~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~---~~~~~~~p~~avA~GAa~~a 449 (945)
.+++.|+|+||+|++ +++.+++.|+. ++....||++|+|+||+++|
T Consensus 271 ---~~~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 271 ---SGYTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp ---CCCCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred ---cCCCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 468999999999987 99999999987 46778899999999999876
No 33
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=99.77 E-value=4.5e-19 Score=184.34 Aligned_cols=151 Identities=23% Similarity=0.351 Sum_probs=118.6
Q ss_pred CCCCCCCccceeeccccccccccceeeEeeccc------------cccCCCCCccccccC---------cCcccCCCCCC
Q psy2902 683 NNKGSNGKDLRYNLEITLEQAAYGFNTSIRVPS------------WDICKSCYGNGAKKG---------TSPISCFTCSG 741 (945)
Q Consensus 683 ~~~~~~g~~~~~~l~~~~~~~~~g~~~~~~~~~------------~~~C~~C~G~G~~~~---------~~~~~C~~C~G 741 (945)
.++.+...++.++|++.|.+.....+......| ..+|+.|+|+|.... ..+++|+.|+|
T Consensus 9 ~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G 88 (248)
T 1nlt_A 9 QRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHG 88 (248)
T ss_dssp CBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSS
T ss_pred CCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCceEEEEEEcCCCCCC
Confidence 467789999999999999999988888877665 378999999997532 24679999999
Q ss_pred CceEeEeeceeeeeecCCCCCCceEE-------------------------------------------eecCCcccCCC
Q psy2902 742 QGQVRMQQGFFSIQQTCPKCQGAGKV-------------------------------------------IPHPCLDCNGI 778 (945)
Q Consensus 742 ~G~~~~~~~~~~~~~~C~~C~G~g~~-------------------------------------------~~~~c~~c~G~ 778 (945)
+|++ +...++|+.|+|.|++ .+|+.|+|+|.
T Consensus 89 ~G~~------i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~ 162 (248)
T 1nlt_A 89 TGDI------IDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGD 162 (248)
T ss_dssp SSSC------CCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETT
T ss_pred cCEE------eccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCC
Confidence 9998 1128899999999972 68999999996
Q ss_pred ceEee--------------------eeeEEEEeecC--CCCCeEEEEcCCCCCCCCCCCCccEEEEEEEecCCc--cccc
Q psy2902 779 GRIKR--------------------NKTLEVKIPAG--IENNMRIRSTGNGEPGLNGGSNGNLYIEIHIKPHKV--FERD 834 (945)
Q Consensus 779 g~~~~--------------------~~~l~v~ip~G--~~~g~~i~~~g~G~~~~~~~~~Gdl~i~i~v~~~~~--~~r~ 834 (945)
+++.+ .+.+.|+||+| +++|++++++|+|||..++..+|||||+|+|..|.. ++.+
T Consensus 163 DL~~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~~~Ls~~ 242 (248)
T 1nlt_A 163 DLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPENHFTSEE 242 (248)
T ss_dssp EEEEEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC-------
T ss_pred EEEEEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEEEECCCCCCCCHH
Confidence 66555 33468999999 999999999999999765446899999999999988 8887
Q ss_pred CCCce
Q psy2902 835 GDDLH 839 (945)
Q Consensus 835 g~dl~ 839 (945)
+.+++
T Consensus 243 q~~~l 247 (248)
T 1nlt_A 243 NLKKL 247 (248)
T ss_dssp -----
T ss_pred HHHhh
Confidence 76654
No 34
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.74 E-value=3.7e-19 Score=200.78 Aligned_cols=298 Identities=15% Similarity=0.115 Sum_probs=89.3
Q ss_pred eEEEEcCccceEEEEEeCCceEEEeCCCCCcCccEEEEEeeC-----------CcEEecHHHHHhhhhCCCchhHHHHHh
Q psy2902 73 IIGIDLGTTNSCVSIIEGSQPKVIENSEGARTTPSVIAYQEN-----------GEILVGAPAKRQAVTNPKNTIYAAKRL 141 (945)
Q Consensus 73 viGID~GTt~s~va~~~~~~~~ii~~~~g~~~~Ps~v~~~~~-----------~~~~~G~~A~~~~~~~~~~~i~~~k~l 141 (945)
.|+||+||.++++++..++.|..+ +||+++.... ...++|.+|.... ...
T Consensus 8 ~ivID~Gs~~~k~G~ag~~~P~~~--------~Ps~v~~~~~~~~~~~~~~~~~~~~vG~ea~~~~--~~~--------- 68 (394)
T 1k8k_B 8 VVVCDNGTGFVKCGYAGSNFPEHI--------FPALVGRPIIRSTTKVGNIEIKDLMVGDEASELR--SML--------- 68 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEECCCCeEEEeeCCCCCccee--------ccceeEEEcccccccccCCCCCCeEEChHHHhcC--CCc---------
Confidence 589999999999999877666532 2555544321 1344566554320 000
Q ss_pred hCCCCCcHHHHhhhcCCCeeEEecCCCceEEEECCeeeChhhHHHHHHHHHH-HHHHHHhCCCCCcEEEEcCCCCCHHHH
Q psy2902 142 IGRKFNEKEVQKDISLMPYKIVKADNGDAWISVRGKKLAPPQISAEVLRKMK-KTAEDYLGGEITEAVITVPAYFNDAQR 220 (945)
Q Consensus 142 lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~-~~a~~~~~~~~~~~VitVPa~~~~~qr 220 (945)
....++....+...+.+..+++++. ..... ....-..++||+|+.++..+|
T Consensus 69 ---------------------------~~~~Pi~~G~i~dwd~~e~i~~~~~~~~~L~-~~~~~~~vllt~p~~~~~~~r 120 (394)
T 1k8k_B 69 ---------------------------EVNYPMENGIVRNWDDMKHLWDYTFGPEKLN-IDTRNCKILLTEPPMNPTKNR 120 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------------------eeeccccCCEEecHHHHHHHHHHHhcccccC-cCCCCCcEEEEECCCCCHHHH
Confidence 0111222223333444455555554 21111 011124589999999999999
Q ss_pred HHHHHHH-HHcCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEecCCCCCch
Q psy2902 221 QATKDAG-RIAGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGG 299 (945)
Q Consensus 221 ~~l~~Aa-~~AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~~~lGG 299 (945)
+++.+++ +.+|++.+.++.||.|||++++. .+.+|+|+|+|||+++.+.- +.. +........+||
T Consensus 121 ~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~-------~~~lVVDiG~g~T~v~pv~~------G~~-~~~~~~~~~~GG 186 (394)
T 1k8k_B 121 EKIVEVMFETYQFSGVYVAIQAVLTLYAQGL-------LTGVVVDSGDGVTHICPVYE------GFS-LPHLTRRLDIAG 186 (394)
T ss_dssp ----------------------------------------CCEEEECSSCEEEECEET------TEE-CSTTCEEESCCH
T ss_pred HHHHHHhhhccCCCeEEEEhhHHHHHHhCCC-------ceEEEEEcCCCceEeeeeEC------CEE-cccceEEeeccH
Confidence 9998865 78899999999999999999875 34699999999999998752 221 111112356899
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcc----------------eeeeeceeeccCCCC
Q psy2902 300 EDFDQRIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQ----------------TEINEPYIAMSNGAP 363 (945)
Q Consensus 300 ~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~----------------~~i~i~~~~~~~~~~ 363 (945)
+++|+.|.+++..+- +......+ .+.+|++|+.+..... ..+.+| +
T Consensus 187 ~~lt~~l~~~l~~~~---~~~~~~~~-------~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~~~lp----d---- 248 (394)
T 1k8k_B 187 RDITRYLIKLLLLRG---YAFNHSAD-------FETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLP----D---- 248 (394)
T ss_dssp HHHHHHHHHHHHHTT---CCCCTTTT-------HHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEECT----T----
T ss_pred HHHHHHHHHHHHhcC---CCCCcHHH-------HHHHHHHHHhheeEecCHHHHHHhhccCCcCceEEECC----C----
Confidence 999999999987641 11110112 3456666766654321 111122 1
Q ss_pred eEEEEEEcHHHHH---HHHHHH-----HHHHHHHHHHHHHHcCCCC--CCCCcEEEecCccccHHHHHHHHHHhCC----
Q psy2902 364 VHLNLKITRAKLE---LLVDEL-----ITRTIEPCRIAIKDAGIKV--SDINDIILVGGMTRMPKVQEKVKEFFGK---- 429 (945)
Q Consensus 364 ~~~~~~itr~~~e---~~~~~~-----i~~i~~~i~~~l~~~~~~~--~~i~~ViLvGG~s~~p~v~~~l~~~fg~---- 429 (945)
+..+.++.+.|. -+++|. ...+.+.|.+.|..+..+. .-.+.|+|+||+|.+|.+.++|++.++.
T Consensus 249 -g~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el~~~~~~ 327 (394)
T 1k8k_B 249 -GRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLE 327 (394)
T ss_dssp -SCEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHHHHHHHH
T ss_pred -CCEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHHHHHHhh
Confidence 225677877763 233332 2346677778888764332 2357899999999999999999887742
Q ss_pred -------------CC--CCCCCCCchhhhhHHHhhh
Q psy2902 430 -------------DP--RRDINPDEAVAVGAAIQGS 450 (945)
Q Consensus 430 -------------~~--~~~~~p~~avA~GAa~~a~ 450 (945)
++ ..+.+|..++.+||+++|.
T Consensus 328 ~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 363 (394)
T 1k8k_B 328 RVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLAD 363 (394)
T ss_dssp HTCSSCCCTTCCCCC---------------------
T ss_pred hhcccccCCCCceEEEEecCCCcceeEEhhhHHhhC
Confidence 22 2245677899999999986
No 35
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.72 E-value=1.2e-17 Score=179.42 Aligned_cols=189 Identities=15% Similarity=0.169 Sum_probs=122.4
Q ss_pred HcCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEecCCCCCchHHHHHHHHH
Q psy2902 229 IAGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRIID 308 (945)
Q Consensus 229 ~AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~~~lGG~~iD~~l~~ 308 (945)
.++......++|++|+|+++..... ....|+|+|||+++++++. .++.++.....+....|+.++++.+++
T Consensus 68 ~a~~~~~~~Vne~~aha~a~~~~~~----~~~~vl~lgG~~~~~~~~~-----~~g~~~~~~~~~~~~~g~G~f~d~~a~ 138 (276)
T 4ehu_A 68 MNYSDADKQISELSCHARGVNFIIP----ETRTIIDIGGQDAKVLKLD-----NNGRLLNFLMNDKCAAGTGRFLDVMAK 138 (276)
T ss_dssp GGCCSCSEECCHHHHHHHHHHHHST----TCCEEEEECSSCEEEEEEC-----TTSCEEEEEEECSCSTTSHHHHHHHHH
T ss_pred HHhhCCCcccchHHHHHHHHHHhCC----CCCeEEEEcCCCceEEEEE-----ecCceEEEEeCCCcCcchhhHHHHHHH
Confidence 3566778899999999998866542 3346789999999999885 567788888888888899999989888
Q ss_pred HHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeeccCCCCeEEEEEEcHHHHHHHHHHHHHHHHH
Q psy2902 309 YILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSNGAPVHLNLKITRAKLELLVDELITRTIE 388 (945)
Q Consensus 309 ~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~~~i~~i~~ 388 (945)
++.-.+..... + .+.......+ ...........-..........++++..+.+.+.+
T Consensus 139 ~l~~~~~~~~~------------~---------~~~a~~~~~i--~~~~~~f~~s~~~~~~~~~~~~~di~a~~~~~v~~ 195 (276)
T 4ehu_A 139 IIEVDVSELGS------------I---------SMNSQNEVSI--SSTCTVFAESEVISHLSENAKIEDIVAGIHTSVAK 195 (276)
T ss_dssp HHTCCGGGHHH------------H---------HTTCSSCCCC--CCCSHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HhccChhhhHH------------H---------HhcCCCCCCc--CCccchhhhhHHHHhhhccccHHHHHHHHHHHHHH
Confidence 87544432110 0 0000000000 00000000000000000001124555555555555
Q ss_pred HHHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHhCCCCCCCCCCCchhhhhHHHhhhhcc
Q psy2902 389 PCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRDINPDEAVAVGAAIQGSVLS 453 (945)
Q Consensus 389 ~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~~~~~~~p~~avA~GAa~~a~~~~ 453 (945)
.+....... ..++.|+|+||.+++|.|++.+++.||.++..+.+|++++|+|||++|....
T Consensus 196 ~l~~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 196 RVSSLVKRI----GVQRNVVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHHTSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHhc----ccCCeEEEecCccchHHHHHHHHHHHCCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 554444433 3468999999999999999999999999999999999999999999997543
No 36
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.67 E-value=2.7e-17 Score=146.86 Aligned_cols=103 Identities=34% Similarity=0.696 Sum_probs=95.3
Q ss_pred CccceeeccccccccccceeeEeeccccccCCCCCccccccCcCcccCCCCCCCceEeEeeceeeeeecCCCCCCceEEe
Q psy2902 689 GKDLRYNLEITLEQAAYGFNTSIRVPSWDICKSCYGNGAKKGTSPISCFTCSGQGQVRMQQGFFSIQQTCPKCQGAGKVI 768 (945)
Q Consensus 689 g~~~~~~l~~~~~~~~~g~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~~~~~C~~C~G~g~~~ 768 (945)
|.++.++|+++|+++|+|.++.+.+.+...|+.|+|+|........+|+.|+|+|++.+.+|+++.+.+|+.|+|.|.++
T Consensus 1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i 80 (104)
T 2ctt_A 1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSII 80 (104)
T ss_dssp CCCCCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEEC
T ss_pred CCceEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceEC
Confidence 35778999999999999999999999999999999999998888889999999999887778888899999999999999
Q ss_pred ecCCcccCCCceEeeeeeEEEEe
Q psy2902 769 PHPCLDCNGIGRIKRNKTLEVKI 791 (945)
Q Consensus 769 ~~~c~~c~G~g~~~~~~~l~v~i 791 (945)
.++|..|.|.|.+.+.++|+|++
T Consensus 81 ~~~C~~C~G~G~v~~~k~l~V~~ 103 (104)
T 2ctt_A 81 ISPCVVCRGAGQAKQKKRSGPSS 103 (104)
T ss_dssp SSCCSSSSSCSEECCCCSSCCSC
T ss_pred CCcCCCCCCeeEEEEEEEEEEEc
Confidence 99999999999999888887764
No 37
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.57 E-value=6.1e-15 Score=162.83 Aligned_cols=207 Identities=15% Similarity=0.200 Sum_probs=134.7
Q ss_pred CcEEEEcCCCCCHHHH-HHHHHHHHHcCC------------ccceecchhHHHHHHhccCCCC-C---CCceEEEEEeCC
Q psy2902 205 TEAVITVPAYFNDAQR-QATKDAGRIAGL------------EVKRIINEPTAAALAFGLDKSG-K---SDRNIVVYDLGG 267 (945)
Q Consensus 205 ~~~VitVPa~~~~~qr-~~l~~Aa~~AGl------------~~v~li~Ep~AAAl~~~~~~~~-~---~~~~vlVvD~Gg 267 (945)
..+++++|..+...++ +++++++..++- ..+.+++||.||++++..+... . .+..++|+|+||
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiGg 193 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFGS 193 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEECS
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeCC
Confidence 3689999999887777 589888875532 4677999999999998764421 1 478899999999
Q ss_pred cceEEEEEEEEeecCCceEEEEEecCCCCCchHHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCc
Q psy2902 268 GTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSK 347 (945)
Q Consensus 268 gT~dvsv~~~~~~~~~~~~~vl~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~ 347 (945)
||+|++++.- +.+ +....+...+|+..+++.+.+++.+++.. ..+. . ...++. .
T Consensus 194 gTtd~~v~~~------~~~-~~~~s~s~~~G~~~~~~~i~~~l~~~~~g---~~l~--~-------~~i~~g-------~ 247 (355)
T 3js6_A 194 GTTIIDTYQN------MKR-VEEESFVINKGTIDFYKRIASHVSKKSEG---ASIT--P-------RMIEKG-------L 247 (355)
T ss_dssp SCEEEEEEET------TEE-CGGGCEEESCCHHHHHHHHHHHTC-----------C--H-------HHHHSC-------C
T ss_pred CcEEEEEEcC------CEE-ccccccCcchHHHHHHHHHHHHHHHhcCC---CcCC--H-------HHHhcC-------C
Confidence 9999999841 111 11112234679999999999998876421 1111 1 111111 0
Q ss_pred ceeeeeceeeccCCCCeEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcEEEecCccccHH--HHHHHHH
Q psy2902 348 QTEINEPYIAMSNGAPVHLNLKITRAKLELLVDELITRTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPK--VQEKVKE 425 (945)
Q Consensus 348 ~~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~--v~~~l~~ 425 (945)
. +...... ..-.+.+ .+.+++++++.++.+.+.+.+.+.+ ...++.|+|+||+|.++. +.+.+++
T Consensus 248 ~------~~~~~~~--~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~ 314 (355)
T 3js6_A 248 E------YKQCKLN--QKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSD 314 (355)
T ss_dssp C---------------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSS
T ss_pred c------ccccccc--ccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHH
Confidence 0 0000000 0001111 2446666777777777777666653 355789999999999998 8899999
Q ss_pred HhCCCCCCCCCCCchhhhhHHHhhhhccC
Q psy2902 426 FFGKDPRRDINPDEAVAVGAAIQGSVLSG 454 (945)
Q Consensus 426 ~fg~~~~~~~~p~~avA~GAa~~a~~~~~ 454 (945)
.|+.. .||..|+|.|+..++..+.+
T Consensus 315 ~~~~~----~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 315 VFEKA----DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp CEECC----SSGGGHHHHHHHHHHHHHHH
T ss_pred HCCCC----CCcHHHHHHHHHHHHHHHHh
Confidence 88442 89999999999999876653
No 38
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.48 E-value=2e-13 Score=155.41 Aligned_cols=178 Identities=17% Similarity=0.139 Sum_probs=125.0
Q ss_pred eEEEEcCccceEEEEEeCCceEEEeCCCCCcCccEEEEEeeC---CcEEecHHHHHhhhhCCCchhHHHHHhhCCCCCcH
Q psy2902 73 IIGIDLGTTNSCVSIIEGSQPKVIENSEGARTTPSVIAYQEN---GEILVGAPAKRQAVTNPKNTIYAAKRLIGRKFNEK 149 (945)
Q Consensus 73 viGID~GTt~s~va~~~~~~~~ii~~~~g~~~~Ps~v~~~~~---~~~~~G~~A~~~~~~~~~~~i~~~k~llg~~~~~~ 149 (945)
.|+||+||.++++++..++.|..+ +||+|+.... ...++|.++.... +.
T Consensus 25 ~iVID~GS~~~kaG~ag~~~P~~v--------~PSvVg~~~~~~~~~~~vG~e~~~~~---r~----------------- 76 (498)
T 3qb0_A 25 AVVIDPGSYTTNIGYSGSDFPQSI--------LPSVYGKYTADEGNKKIFSEQSIGIP---RK----------------- 76 (498)
T ss_dssp CEEEECCSSEEEEEETTCSSCSEE--------EESEEEEESSCSSCCEECCTTGGGSC---CT-----------------
T ss_pred eEEEECCCcEEEEEECCCCCeeee--------cCceeEEeccCCCccEEEecHHHhcC---cC-----------------
Confidence 599999999999998766656554 4899988643 2466776532210 00
Q ss_pred HHHhhhcCCCeeEEecCCCceEEEECCeeeChhhHHHHHHHHHHHHHHHHhCCC--CC-cEEEEcCCCCCHHHHHHHHHH
Q psy2902 150 EVQKDISLMPYKIVKADNGDAWISVRGKKLAPPQISAEVLRKMKKTAEDYLGGE--IT-EAVITVPAYFNDAQRQATKDA 226 (945)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~a~~L~~l~~~a~~~~~~~--~~-~~VitVPa~~~~~qr~~l~~A 226 (945)
.-.+...+....+...+.+..++.++.... +... -. .++||.|.......|+.|.++
T Consensus 77 -----------------~l~l~~Pi~~GvI~dwd~~E~iw~~~f~~~---L~v~p~~~~pvlltep~~n~~~~Re~~~ei 136 (498)
T 3qb0_A 77 -----------------DYELKPIIENGLVIDWDTAQEQWQWALQNE---LYLNSNSGIPALLTEPVWNSTENRKKSLEV 136 (498)
T ss_dssp -----------------TEEEEESEETTEESCHHHHHHHHHHHHHHT---SCCSCCTTCCEEEEECTTCCHHHHHHHHHH
T ss_pred -----------------ceEEeccCcCCEEccHHHHHHHHHHHHHhh---hCCCcccCCceEEEeCCCCcHHHHHHHHHH
Confidence 001233344556667777777777776532 3221 22 589999998889999999887
Q ss_pred H-HHcCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEecCCCCCchHHHHHH
Q psy2902 227 G-RIAGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQR 305 (945)
Q Consensus 227 a-~~AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~~~lGG~~iD~~ 305 (945)
+ +.+|++.+.++.+|.||+++++.. +-||+|+|+|+|+++.+.-...-.... .-..+||.++|+.
T Consensus 137 lFE~f~vpav~l~~~~vlalya~G~~-------tglVVDiG~g~T~vvPI~~G~~l~~ai-------~rl~vgG~~lt~~ 202 (498)
T 3qb0_A 137 LLEGMQFEACYLAPTSTCVSFAAGRP-------NCLVVDIGHDTCSVSPIVDGMTLSKST-------RRNFIAGKFINHL 202 (498)
T ss_dssp HHTTSCCSEEEEEEHHHHHHHHHTCS-------SEEEEEECSSCEEEEEEETTEECGGGC-------EEESCSHHHHHHH
T ss_pred HHhhcCCCeEeecchHHHHHHHcCCC-------eEEEEEcCCCcEEEEEEeCCEEccccc-------eeccccHHHHHHH
Confidence 5 789999999999999999998763 249999999999999985311111111 1136799999999
Q ss_pred HHHHHHH
Q psy2902 306 IIDYILD 312 (945)
Q Consensus 306 l~~~l~~ 312 (945)
|.++|.+
T Consensus 203 L~~lL~~ 209 (498)
T 3qb0_A 203 IKKALEP 209 (498)
T ss_dssp HHHHTTT
T ss_pred HHHHHHh
Confidence 9999864
No 39
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.47 E-value=2.9e-14 Score=161.03 Aligned_cols=254 Identities=16% Similarity=0.091 Sum_probs=155.3
Q ss_pred CCeeeChhhHHHHHHHHHHHHHHHHhCCC--CCcEEEEcCCCCCHHHHHHHHHHH-HHcCCccceecchhHHHHHHhccC
Q psy2902 175 RGKKLAPPQISAEVLRKMKKTAEDYLGGE--ITEAVITVPAYFNDAQRQATKDAG-RIAGLEVKRIINEPTAAALAFGLD 251 (945)
Q Consensus 175 ~~~~~~~~ev~a~~L~~l~~~a~~~~~~~--~~~~VitVPa~~~~~qr~~l~~Aa-~~AGl~~v~li~Ep~AAAl~~~~~ 251 (945)
.+..+...+.+..+++++... .+... -..+++|.|...+...|+.+.+++ +.+|++.+.++.+|.+|+++++..
T Consensus 95 ~~GvI~dwd~~e~iw~~~~~~---~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~ 171 (427)
T 3dwl_A 95 RHGQIENWDHMERFWQQSLFK---YLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTS 171 (427)
T ss_dssp ETTEECCHHHHHHHHHHHHHT---TSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGS
T ss_pred ccCeeccHHHHHHHHHHHHhH---hhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCc
Confidence 344556667777777766542 23322 246899999999999999998887 789999999999999999998754
Q ss_pred CCC-CCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEecCCCCCchHHHHHHHHHHHHHHHHHHhCCCCccCHHHHH
Q psy2902 252 KSG-KSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRIIDYILDEFNKINGIDLRKDSIALQ 330 (945)
Q Consensus 252 ~~~-~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~ 330 (945)
... ....+-||+|+|+|+|+++.+.-...-.... ....+||.++|+.|.++|..+.....
T Consensus 172 ~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~-------~rl~~gG~~lt~~L~~lL~~~~~~~~------------ 232 (427)
T 3dwl_A 172 SKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSI-------KTMPLAGRDVTYFVQSLLRDRNEPDS------------ 232 (427)
T ss_dssp TTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGC-------EEESCCHHHHHHHHHHTTC-------------------
T ss_pred ccccCCCceEEEEECCCCceEEEEEECCEEehhhh-------eeccccHHHHHHHHHHHHHHcCCCch------------
Confidence 211 1135679999999999999985211111111 11367999999999988876543200
Q ss_pred HHHHHHHHHHHHhcCCcce---ee--------eeceeeccCCCCeEEEEEEcHHHH---HHHHHHH------HHHHHHHH
Q psy2902 331 RIKASAERAKIELSSSKQT---EI--------NEPYIAMSNGAPVHLNLKITRAKL---ELLVDEL------ITRTIEPC 390 (945)
Q Consensus 331 ~L~~~~e~~K~~Ls~~~~~---~i--------~i~~~~~~~~~~~~~~~~itr~~~---e~~~~~~------i~~i~~~i 390 (945)
=.+.++.+|+.+...... ++ .+..............+.+..+.| |-++.|- ...+.+++
T Consensus 233 -~~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i 311 (427)
T 3dwl_A 233 -SLKTAERIKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELV 311 (427)
T ss_dssp --CHHHHHHHHHHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHH
T ss_pred -hHHHHHHHHHhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHH
Confidence 034566777776643211 00 000000000000122456666665 2334441 23466777
Q ss_pred HHHHHHcCCCC--CCCCcEEEecCccccHHHHHHHHHHhC----------------------CCCCCCCCCCchhhhhHH
Q psy2902 391 RIAIKDAGIKV--SDINDIILVGGMTRMPKVQEKVKEFFG----------------------KDPRRDINPDEAVAVGAA 446 (945)
Q Consensus 391 ~~~l~~~~~~~--~~i~~ViLvGG~s~~p~v~~~l~~~fg----------------------~~~~~~~~p~~avA~GAa 446 (945)
.+.|.++..+. .-...|+|+||+|.+|.+.++|.+.+. .++..+.++..++=+|++
T Consensus 312 ~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGS 391 (427)
T 3dwl_A 312 DNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGS 391 (427)
T ss_dssp HHHHHTSCHHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHH
T ss_pred HHHHHhCCHHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCce
Confidence 77777654321 113569999999999999998887651 111224466789999999
Q ss_pred Hhhhh
Q psy2902 447 IQGSV 451 (945)
Q Consensus 447 ~~a~~ 451 (945)
++|..
T Consensus 392 ilasl 396 (427)
T 3dwl_A 392 LLAQT 396 (427)
T ss_dssp HHHHS
T ss_pred eeccc
Confidence 99963
No 40
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.42 E-value=1e-14 Score=159.86 Aligned_cols=203 Identities=15% Similarity=0.148 Sum_probs=136.4
Q ss_pred CcEEEEcCCCCCH--HHHHHHHHHHHHc--------C------CccceecchhHHHHHHhccCCCCCCCceEEEEEeCCc
Q psy2902 205 TEAVITVPAYFND--AQRQATKDAGRIA--------G------LEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGG 268 (945)
Q Consensus 205 ~~~VitVPa~~~~--~qr~~l~~Aa~~A--------G------l~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~Ggg 268 (945)
..++++.|..+.. .+++.+++....- | +..+.+++||.+|.+.+.. ......++|+|+|||
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~~---~~~~~~v~vvDiGgg 182 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQE---NFKNKNVAVIDFGGL 182 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSCC---CCTTCEEEEEEECSS
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcch---hhccCCEEEEEeCCC
Confidence 4688999987653 3677777765521 1 1346689999998877531 235788999999999
Q ss_pred ceEEEEEEEEeecCCceEEEEEecCCCCCchHHHHHHHHHHHHH-HHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCc
Q psy2902 269 TFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRIIDYILD-EFNKINGIDLRKDSIALQRIKASAERAKIELSSSK 347 (945)
Q Consensus 269 T~dvsv~~~~~~~~~~~~~vl~~~~~~~lGG~~iD~~l~~~l~~-~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~ 347 (945)
|+|++++.- +.+ +....+...+||.++++.+.+++.+ ++. ..+.. ..+|++++. ..
T Consensus 183 Ttd~~v~~~------g~~-~~~~~~~~~~G~~~~~~~i~~~l~~~~~g----~~i~~---------~~~e~i~~~-g~-- 239 (329)
T 4apw_A 183 NMGFSLYRN------CVV-NPSERFIEEHGVKDLIIRVGDALTDLNNG----NLITN---------EQAESALNN-GY-- 239 (329)
T ss_dssp CEEEEEEET------TEE-CGGGCEEESCCHHHHHHHHHTSSSSCSSC----SCTTS---------BTTTTCSSS-CS--
T ss_pred cEEEEEEEC------CEE-eeccccchhhHHHHHHHHHHHHHHhhccC----CCCCH---------HHHHHHHhc-CC--
Confidence 999999973 222 2122234568999999999988766 433 22211 122333221 00
Q ss_pred ceeeeeceeeccCCCCeEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHh
Q psy2902 348 QTEINEPYIAMSNGAPVHLNLKITRAKLELLVDELITRTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFF 427 (945)
Q Consensus 348 ~~~i~i~~~~~~~~~~~~~~~~itr~~~e~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f 427 (945)
+. ...+ + ..+..+++++.+++.++.+.+.+.+. +.++..++.|+|+||+|.+ +.+.+++.|
T Consensus 240 ---~~---~g~~------~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~ 300 (329)
T 4apw_A 240 ---MK---KGGE------I-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTY 300 (329)
T ss_dssp ---SC---EECT------T-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHS
T ss_pred ---cc---cCCc------c-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHc
Confidence 00 0000 0 13456777777777777777766655 3444557999999999998 569999999
Q ss_pred CCCCCCCCCCCchhhhhHHHhhhhc
Q psy2902 428 GKDPRRDINPDEAVAVGAAIQGSVL 452 (945)
Q Consensus 428 g~~~~~~~~p~~avA~GAa~~a~~~ 452 (945)
+.++....||..|+|+|+..++...
T Consensus 301 ~~~v~v~~~P~~a~a~G~~~~~~~k 325 (329)
T 4apw_A 301 PNNSIITNNSQWTTCEGLYKVAVAK 325 (329)
T ss_dssp TTCEECCSSGGGHHHHHHHHHHHHH
T ss_pred CCCCEecCCChhhHHHHHHHHHhhh
Confidence 8778788999999999999887643
No 41
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=99.25 E-value=4.7e-12 Score=107.00 Aligned_cols=76 Identities=53% Similarity=1.149 Sum_probs=67.5
Q ss_pred eeeEeeccccccCCCCCccccccCcCcccCCCCCCCceEeEeeceeeeeecCCCCCCceEEeecCCcccCCCceEe
Q psy2902 707 FNTSIRVPSWDICKSCYGNGAKKGTSPISCFTCSGQGQVRMQQGFFSIQQTCPKCQGAGKVIPHPCLDCNGIGRIK 782 (945)
Q Consensus 707 ~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~~~~~C~~C~G~g~~~~~~c~~c~G~g~~~ 782 (945)
.++.+.+.+...|+.|+|+|........+|+.|+|+|++...+|+++...+|+.|+|.|.++.++|..|.|.|.+.
T Consensus 2 ~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~C~~C~G~G~~~ 77 (79)
T 1exk_A 2 VTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVE 77 (79)
T ss_dssp TTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECSSBCGGGTTSSEEE
T ss_pred cEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEECCCcCCCCCCeEEEe
Confidence 4556677888999999999998877778999999999987666888888999999999999999999999999765
No 42
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=99.22 E-value=2.1e-11 Score=141.58 Aligned_cols=208 Identities=13% Similarity=0.125 Sum_probs=125.5
Q ss_pred HHHHHHcCC----ccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCCce-EEE-EE-----ec
Q psy2902 224 KDAGRIAGL----EVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQ-FEV-LS-----TN 292 (945)
Q Consensus 224 ~~Aa~~AGl----~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~-~~v-l~-----~~ 292 (945)
.++|+..|| +++....+..||+++.+... .+ .+++-+|.+++-..+..-........ +.. +. ..
T Consensus 219 ~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~g~~~---~g--~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (504)
T 3ll3_A 219 TEYVKKLGIDSDTKIILGASDGYLSTIGVNAID---SD--HCALNVGTSGAIRTIVDQPKIDPSASYFCYPADKTHYLLG 293 (504)
T ss_dssp HHHHHHHTCCTTCEEEEEEEHHHHHHHTTTCCS---TT--EEEEEESSSEEEEEEESSCCCCTTCCSEEEEEETTEEEEE
T ss_pred HHHHHhcCCCcCCCEEEEccHHHHHHHhCCCCC---CC--cEEEEechhhhheeeCCCcccCCCCceEEEEeCCCeEEEE
Confidence 456666666 46667889999999886643 12 34455676665544332111111111 111 00 01
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeeccC---------CCC
Q psy2902 293 GDTFLGGEDFDQRIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSN---------GAP 363 (945)
Q Consensus 293 ~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~---------~~~ 363 (945)
+....||. .++|+++.+.... .. ...+...+++ ........+.+|++.... +..
T Consensus 294 g~~~~~G~-----~~~W~~~~~~~~~-----~~---~~~~~~~a~~----~~~g~~gl~~~P~~~Ger~P~~d~~arg~~ 356 (504)
T 3ll3_A 294 GPVNNGGI-----VFNWARQTLFDAD-----ET---PQDFLDVAQT----APAGSRNLIFLPYLGGERAPIWDANARGSF 356 (504)
T ss_dssp EEESCSHH-----HHHHHHHHHTCTT-----CC---HHHHHHHHHT----SCTTGGGCEEECCTTCBCTTTCBTTCCEEE
T ss_pred eehhhHHH-----HHHHHHHHhccch-----hH---HHHHHHHHhc----CCCCCCCeEEecCccCCCCCCCCCccCeEE
Confidence 11233444 5578888774211 11 1122222222 123345567777764211 111
Q ss_pred eEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHhCCCCCCCCCCCchhhh
Q psy2902 364 VHLNLKITRAKLELLVDELITRTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRDINPDEAVAV 443 (945)
Q Consensus 364 ~~~~~~itr~~~e~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~~~~~~~p~~avA~ 443 (945)
.+++...++.+|-+.+-+.+......+.+.|++.+. .++.|.++||+++++.|.+++++.||.++... .+.++.|+
T Consensus 357 ~Gl~~~~~~~~l~RAvlEgia~~~r~~~~~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~al 432 (504)
T 3ll3_A 357 VGLTRMHQKPEMARAVIEGIIFNLYDAASNLIKNTK---KPVAINATGGFLKSDFVRQLCANIFNVPIVTM-KEQQSGTL 432 (504)
T ss_dssp EEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTSC---CCSEEEEESGGGCSHHHHHHHHHHHTSCEEEE-SCSCHHHH
T ss_pred ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEeCchhcCHHHHHHHHHhhCCeEEec-CCCCchhH
Confidence 344455688888877777666666666677776553 47899999999999999999999999998754 45779999
Q ss_pred hHHHhhhhccCCCC
Q psy2902 444 GAAIQGSVLSGDRK 457 (945)
Q Consensus 444 GAa~~a~~~~~~~~ 457 (945)
|||+.|+...|..+
T Consensus 433 GaA~lA~~a~G~~~ 446 (504)
T 3ll3_A 433 AAMFLARQALGLNQ 446 (504)
T ss_dssp HHHHHHHHHTTSCC
T ss_pred HHHHHHHHHcCccC
Confidence 99999998777443
No 43
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=99.14 E-value=5.9e-09 Score=124.30 Aligned_cols=111 Identities=15% Similarity=0.210 Sum_probs=82.9
Q ss_pred HHHHHHHHH-HHhCCCCC-----cEEEEcCCCCCHHHHHHHHHH-HHHcCCccceecchhHHHHHHhccCCCCCCCceEE
Q psy2902 189 LRKMKKTAE-DYLGGEIT-----EAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAALAFGLDKSGKSDRNIV 261 (945)
Q Consensus 189 L~~l~~~a~-~~~~~~~~-----~~VitVPa~~~~~qr~~l~~A-a~~AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vl 261 (945)
+..|++++- ..++.... .++||.|..++...|+.|.+. .+..|++.+.++.++.||+++++.. +-+
T Consensus 177 ~e~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~-------tgl 249 (593)
T 4fo0_A 177 IEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLS-------STC 249 (593)
T ss_dssp HHHHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCS-------EEE
T ss_pred HHHHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCC-------ceE
Confidence 445555553 45654433 389999999999999888665 5677999999999999999998764 468
Q ss_pred EEEeCCcceEEEEEEEEeecCCceEEEEEecCCCCCchHHHHHHHHHHHHHH
Q psy2902 262 VYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRIIDYILDE 313 (945)
Q Consensus 262 VvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~~~lGG~~iD~~l~~~l~~~ 313 (945)
|||+|.+.|.++-+.-+-.-...... ..+||.++++.|.++|..+
T Consensus 250 VVDiG~~~T~v~PV~dG~~l~~~~~r-------l~~GG~~lt~~L~~lL~~~ 294 (593)
T 4fo0_A 250 IVDVGDQKTSVCCVEDGVSHRNTRLC-------LAYGGSDVSRCFYWLMQRA 294 (593)
T ss_dssp EEEECSSCEEEEEEESSCBCGGGCEE-------ESCCHHHHHHHHHHHHHHT
T ss_pred EEEeCCCceeeeeeECCEEehhheEE-------ecccHHHHHHHHHHHHHhc
Confidence 99999999999988632111122222 3579999999999888754
No 44
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=99.12 E-value=6e-11 Score=137.98 Aligned_cols=216 Identities=15% Similarity=0.067 Sum_probs=126.6
Q ss_pred HHHHHHcCC----ccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEE-EEeec-CCceEEEEEec-CCC-
Q psy2902 224 KDAGRIAGL----EVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIE-IADVD-GEKQFEVLSTN-GDT- 295 (945)
Q Consensus 224 ~~Aa~~AGl----~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~-~~~~~-~~~~~~vl~~~-~~~- 295 (945)
.++|+..|| +++....+..||+++.+... .+. +++-+|.+++-..+.. -.... ....+...... .+.
T Consensus 223 ~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~g~~~---~g~--~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (511)
T 3hz6_A 223 ALAARQTGFVSGTPVLCGLGDAGAATLGVGVLD---DED--AYLHLGTTGWLARLTQTDPVGDMPVGTIFRLAGIIAGKT 297 (511)
T ss_dssp HHHHHHHCCCTTCEEECCEEHHHHHHHHTTCCS---TTC--EEEEESSSEEEEEEEECCCCCSCCSSCCEEECSSSTTEE
T ss_pred HHHHHhhCCCCCCeEEEECchHHHHHHhCCCCC---CCc--EEEEecchhhheeecCCeecccCCCCceEEEEEecCCce
Confidence 467777666 46667889999999887643 233 3445677665555444 11111 22222222211 000
Q ss_pred -CCchHHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeeccCC---------CCeE
Q psy2902 296 -FLGGEDFDQRIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSNG---------APVH 365 (945)
Q Consensus 296 -~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~---------~~~~ 365 (945)
.+|+...-...++|+++.+... . .. .+..|.+.++++.... ......+.+|++..... ...+
T Consensus 298 ~~~g~~~~~G~~~~W~~~~~~~~--~--~~---~~~~l~~~a~~~~~g~-~~~~gl~~~P~~~Ger~P~~d~~arg~~~G 369 (511)
T 3hz6_A 298 LQVAPVLNAGNILQWALTLVGHR--P--GE---DCAEYFHMAAAEVQGV-TVPDGLLFVPYLHAERCPVELPAPRGALLG 369 (511)
T ss_dssp EEEEEESSSHHHHHHHGGGGTCC--T--TS---CSHHHHHHHHHHHTTC-CCCTTCEEEEESSCBCSSSCBSSCEEEEEC
T ss_pred EEEeehhhHHHHHHHHHHHhccc--c--cc---cHHHHHHHHHhCCCCC-CCCCCEEEeCCCCCCCCCCCCCccceEEEc
Confidence 0122222235678887766410 0 00 1334555555542110 00345567776542211 1123
Q ss_pred EEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHhCCCC-CCCCCCCchhhhh
Q psy2902 366 LNLKITRAKLELLVDELITRTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDP-RRDINPDEAVAVG 444 (945)
Q Consensus 366 ~~~~itr~~~e~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~~-~~~~~p~~avA~G 444 (945)
++...++.+|.+.+-+.+......+.+.|++ + . ++.|.++||+++++.|.+++++.||.++ .. ..+.++.|+|
T Consensus 370 l~~~~~~~~l~RAvlEgia~~~~~~~~~l~~-g---~-~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~~e~~alG 443 (511)
T 3hz6_A 370 VTGATTRAQILLAVLEGAALSLRWCAELLGM-E---K-VGLLKVVGGGARSEAWLRMIADNLNVSLLVK-PDAHLHPLRG 443 (511)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHHHTG-G---G-CCEEEEESGGGGCHHHHHHHHHHHTCEEEEC-CCGGGHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHhc-C---C-CCEEEEeCchhcCHHHHHHHHHHHCCeeEEe-cCCCCchHHH
Confidence 3445678888777666665555555556655 3 3 6899999999999999999999999998 64 4478999999
Q ss_pred HHHhhhhccCCCCc
Q psy2902 445 AAIQGSVLSGDRKD 458 (945)
Q Consensus 445 Aa~~a~~~~~~~~~ 458 (945)
||+.|+...|..++
T Consensus 444 aA~lA~~a~G~~~~ 457 (511)
T 3hz6_A 444 LAALAAVELEWSHS 457 (511)
T ss_dssp HHHHHHHHTTSCSC
T ss_pred HHHHHHHHhCCcCC
Confidence 99999988775443
No 45
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.10 E-value=9.1e-10 Score=121.69 Aligned_cols=200 Identities=21% Similarity=0.173 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHHHc-CC--ccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEecC
Q psy2902 217 DAQRQATKDAGRIA-GL--EVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNG 293 (945)
Q Consensus 217 ~~qr~~l~~Aa~~A-Gl--~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~ 293 (945)
..+-+.+.++.+.+ || ++-. .||.||+++++.+. ..+-.+.++|+||||||++++. .+.........
T Consensus 367 ~~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeD--E~eLGvaiIDmGGGTTd~sVf~-----~G~lv~a~~ip- 436 (610)
T 2d0o_A 367 RLQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTP--GTTRPLAILDLGAGSTDASIIN-----PKGDIIATHLA- 436 (610)
T ss_dssp CCCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTST--TCCSSEEEEEECSSEEEEEEEC-----TTCCEEEEEEE-
T ss_pred HHHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCC--CCcCCeEEEEeCCCcceEEEEc-----CCcEEEEEEec-
Confidence 34578888999999 99 5545 99999999998877 5677789999999999999996 33333333333
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCc----------ceeeee--ceeeccCC
Q psy2902 294 DTFLGGEDFDQRIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSK----------QTEINE--PYIAMSNG 361 (945)
Q Consensus 294 ~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~----------~~~i~i--~~~~~~~~ 361 (945)
.||++++..+..-|.-. + ...||++|. ..... +..+.+ +.+.....
T Consensus 437 ---~gG~~VT~DIA~~Lgt~-----------d-------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~ 494 (610)
T 2d0o_A 437 ---GAGDMVTMIIARELGLE-----------D-------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVF 494 (610)
T ss_dssp ---CSHHHHHHHHHHHHTCC-----------C-------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGT
T ss_pred ---cchHHHHHHHHHHhCCC-----------C-------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCccee
Confidence 49999998887543211 0 457899998 64321 223333 33221110
Q ss_pred CC-----eEEEEEEcHHH--HHHHHHHHHHHHHHH--HHHHHHHcCC-----CCCCCCcEEEecCccccHHHHHHHHHHh
Q psy2902 362 AP-----VHLNLKITRAK--LELLVDELITRTIEP--CRIAIKDAGI-----KVSDINDIILVGGMTRMPKVQEKVKEFF 427 (945)
Q Consensus 362 ~~-----~~~~~~itr~~--~e~~~~~~i~~i~~~--i~~~l~~~~~-----~~~~i~~ViLvGG~s~~p~v~~~l~~~f 427 (945)
.. ...-..| +.. +|+ ++-+-+++.+. +..+|+..+. ...+|..|+|+||+|.++.+.++.++.|
T Consensus 495 ~Rv~~~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL 572 (610)
T 2d0o_A 495 ARVCVVKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDAL 572 (610)
T ss_dssp TCEEEECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHT
T ss_pred eeeecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHh
Confidence 00 0112345 556 666 55544444333 2333444322 2346799999999999999999999999
Q ss_pred CC-CCC-------CCCCCCchhhhhHHHhhh
Q psy2902 428 GK-DPR-------RDINPDEAVAVGAAIQGS 450 (945)
Q Consensus 428 g~-~~~-------~~~~p~~avA~GAa~~a~ 450 (945)
+. ++. ....|..|+|.|.+++.+
T Consensus 573 ~~y~VRiGrP~~~gv~gP~fAtAvGLlly~~ 603 (610)
T 2d0o_A 573 AHYRLVAGRGNIRGSEGPRNAVATGLILSWH 603 (610)
T ss_dssp TTSSCEEEECCGGGTSTTSCHHHHHHHHHHH
T ss_pred CcCCeEEecCCccccCCCcHHHHHHHHHHHh
Confidence 87 542 245899999999998764
No 46
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=99.09 E-value=5.3e-11 Score=138.31 Aligned_cols=213 Identities=19% Similarity=0.169 Sum_probs=128.6
Q ss_pred HHHHHHcCC----ccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEe--cCCCC-
Q psy2902 224 KDAGRIAGL----EVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLST--NGDTF- 296 (945)
Q Consensus 224 ~~Aa~~AGl----~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~--~~~~~- 296 (945)
.++|+..|| +++....+..||+++.+... .+ .+++-+|.+++-..+..-...... +..... .+...
T Consensus 225 ~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~g~~~---~g--~~~~s~GTs~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~ 297 (508)
T 3ifr_A 225 AEAAALTGLPTGLPVYGGAADHIASALAAGITR---PG--DVLLKFGGAGDIIVASATAKSDPR--LYLDYHLVPGLYAP 297 (508)
T ss_dssp HHHHHHHCCCTTCEEECCEEHHHHHHHHTTCCS---TT--EEEEEESSSEEEEECBSCCCCBTT--BBCCBCSSTTCBCC
T ss_pred HHHHHHhCCCCCCeEEEECchHHHHHHhCCCCC---CC--cEEEEechhhhheeeCCCcccCCC--cceeeeecCCceEE
Confidence 467777776 45667889999999887643 22 344456666554443321101111 111111 11111
Q ss_pred CchHHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeecc---------CCCCeEEE
Q psy2902 297 LGGEDFDQRIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMS---------NGAPVHLN 367 (945)
Q Consensus 297 lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~---------~~~~~~~~ 367 (945)
.|+..--...++|+++.|.. .+. + ..+..|.+.+++. .......+.+|++... .+...+++
T Consensus 298 ~g~~~~~G~~~~W~~~~~~~-~~~----~-~~~~~l~~~a~~~----~~~~~gl~flP~~~Ger~P~~d~~arg~~~Gl~ 367 (508)
T 3ifr_A 298 NGCMAATGSALNWLAKLLAP-EAG----E-AAHAQLDALAAEV----PAGADGLVCLPYFLGEKTPIHDPFASGTFTGLS 367 (508)
T ss_dssp EEEESSSHHHHHHHHHHHST-TCT----T-HHHHHHHHHHHTS----CTTGGGCEEECCTTCCC----CCCCCCEEESCC
T ss_pred echhhhhHHHHHHHHHHHhh-cCC----C-CCHHHHHHHHhcC----CCCCCCeEEecCCCCCCCCCCCCCcCEEEECCC
Confidence 13333334557788887740 111 0 1244444444432 3345556777765311 11112334
Q ss_pred EEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHhCCCCCCCCCCCchhhhhHHH
Q psy2902 368 LKITRAKLELLVDELITRTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRDINPDEAVAVGAAI 447 (945)
Q Consensus 368 ~~itr~~~e~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~~~~~~~p~~avA~GAa~ 447 (945)
...++.+|-+.+-+.+......+.+.|++.+.+ ++.|.++||+++++.|.+++++.||.++..... .++.|+|||+
T Consensus 368 ~~~~~~~l~rAvlEgia~~~~~~~~~l~~~g~~---~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~-~e~~alGaA~ 443 (508)
T 3ifr_A 368 LSHTRGHLWRALLEAVALAFRHHVAVLDDIGHA---PQRFFASDGGTRSRVWMGIMADVLQRPVQLLAN-PLGSAVGAAW 443 (508)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTCC---CCEEEEESGGGGCHHHHHHHHHHHTSCEEEEEC-CSTHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---CCEEEEeCCcccCHHHHHHHHHHhCCeEEecCC-CCchHHHHHH
Confidence 456899988877777766666666777766543 689999999999999999999999999876543 5689999999
Q ss_pred hhhhccCCCC
Q psy2902 448 QGSVLSGDRK 457 (945)
Q Consensus 448 ~a~~~~~~~~ 457 (945)
.|+...|..+
T Consensus 444 lA~~a~G~~~ 453 (508)
T 3ifr_A 444 VAAIGGGDDL 453 (508)
T ss_dssp HHHHHTCSSC
T ss_pred HHHHHhCCCC
Confidence 9998777443
No 47
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.08 E-value=9.3e-10 Score=122.16 Aligned_cols=197 Identities=20% Similarity=0.154 Sum_probs=131.4
Q ss_pred HHHHHHHHHHHc-CC--ccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEecCCC
Q psy2902 219 QRQATKDAGRIA-GL--EVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDT 295 (945)
Q Consensus 219 qr~~l~~Aa~~A-Gl--~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~~ 295 (945)
+-+.+.++.+.+ || ++-. .||.||+++++.+. ..+-.+.++|+||||||++++. .+.........
T Consensus 371 ~m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTed--E~elGvaiIDmGgGTTd~sVf~-----~g~lv~a~~ip--- 438 (607)
T 1nbw_A 371 QMQVIARELSARLQTEVVVGG--VEANMAIAGALTTP--GCAAPLAILDLGAGSTDAAIVN-----AEGQITAVHLA--- 438 (607)
T ss_dssp CSCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTST--TCCSSEEEEEECSSEEEEEEEC-----SSSCEEEEEEE---
T ss_pred HHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCC--CCcCCeEEEEeCCCcceEEEEc-----CCcEEEEEEec---
Confidence 456778888888 99 5544 99999999998877 5677789999999999999996 33333333333
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCc----------ceeeee--ceeeccCCCC
Q psy2902 296 FLGGEDFDQRIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSK----------QTEINE--PYIAMSNGAP 363 (945)
Q Consensus 296 ~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~----------~~~i~i--~~~~~~~~~~ 363 (945)
.||++++..+..-|.-. + ...||++|. ..... +..+.+ +.+.......
T Consensus 439 -~gG~~VT~DIA~~Lg~~-----------d-------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~R 498 (607)
T 1nbw_A 439 -GAGNMVSLLIKTELGLE-----------D-------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFAK 498 (607)
T ss_dssp -CCHHHHHHHHHHHHTCS-----------C-------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTC
T ss_pred -cchHHHHHHHHHHhCCC-----------C-------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeee
Confidence 49999998887543211 0 457899998 64321 223333 3332111000
Q ss_pred -----eEEEEEEcHHH--HHHHHHHHHHHHHHH--HHHHHHHcCCC-----CCCCCcEEEecCccccHHHHHHHHHHhCC
Q psy2902 364 -----VHLNLKITRAK--LELLVDELITRTIEP--CRIAIKDAGIK-----VSDINDIILVGGMTRMPKVQEKVKEFFGK 429 (945)
Q Consensus 364 -----~~~~~~itr~~--~e~~~~~~i~~i~~~--i~~~l~~~~~~-----~~~i~~ViLvGG~s~~p~v~~~l~~~fg~ 429 (945)
...-..| +.. +|+ ++-+-+++.+. +..+|+..+.. ..+|..|+|+||+|.++.+.++.++.|+.
T Consensus 499 ~~~~~~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~ 576 (607)
T 1nbw_A 499 VVYIKEGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSH 576 (607)
T ss_dssp EEEEETTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHT
T ss_pred eecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCc
Confidence 0112244 555 666 55544444433 45557766553 34678999999999999999999999976
Q ss_pred -CCC-------CCCCCCchhhhhHHHhh
Q psy2902 430 -DPR-------RDINPDEAVAVGAAIQG 449 (945)
Q Consensus 430 -~~~-------~~~~p~~avA~GAa~~a 449 (945)
++. ....|..|+|.|.+++.
T Consensus 577 ~~VRiGrP~~~g~~gP~fAtAvGLlly~ 604 (607)
T 1nbw_A 577 YGVVAGQGNIRGTEGPRNAVATGLLLAG 604 (607)
T ss_dssp TTCEEEECCGGGTSCSCCHHHHHHHHHH
T ss_pred CCeEEecCCccccCCchHHHHHHHHHhh
Confidence 442 24589999999999765
No 48
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=99.00 E-value=1.7e-10 Score=134.87 Aligned_cols=210 Identities=18% Similarity=0.148 Sum_probs=122.1
Q ss_pred HHHcCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeec-CCceEEEEEecCCC-----CCchH
Q psy2902 227 GRIAGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVD-GEKQFEVLSTNGDT-----FLGGE 300 (945)
Q Consensus 227 a~~AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~-~~~~~~vl~~~~~~-----~lGG~ 300 (945)
+...|+++.....+..||+++.+.... +. +.+-+|.+++-.....-.... .............. ..|+.
T Consensus 232 ~~~~gipV~~g~gD~~aa~~G~g~~~~---g~--~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~eg~~ 306 (526)
T 3ezw_A 232 KGGTRIPISGIAGDQQAALFGQLCVKE---GM--AKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEVNYALEGAV 306 (526)
T ss_dssp TTSCCEEEEEEEEHHHHHHHHTTCCST---TC--EEEEESSSEEEEEECTTSCCCCSSSCEEEEEECTTSCEEEEEEEEE
T ss_pred hcCCCCcEEEEcchHHHHhhhcccccc---ce--eEEEeccCeeEecccCCccccccccceeeeeeccCCcceeeeHHHH
Confidence 344677877788899999998876542 33 233355554332221100000 11122221111100 01333
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeeccC---------CCCeEEEEEEc
Q psy2902 301 DFDQRIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSN---------GAPVHLNLKIT 371 (945)
Q Consensus 301 ~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~---------~~~~~~~~~it 371 (945)
......++|+++.+.... ..... +.+.. ........+.+|++.... +...+++...+
T Consensus 307 ~~~G~~~~Wl~~~~~~~~---~~~~~----------~~~~~-~~~~~~gl~~lP~~~G~r~P~~d~~arG~~~Glt~~~~ 372 (526)
T 3ezw_A 307 FMAGASIQWLRDEMKLIN---DAYDS----------EYFAT-KVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVN 372 (526)
T ss_dssp SCSHHHHHHHHHTSCCCC---SSSCH----------HHHHT-TSSSCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCC
T ss_pred HHHHHHHHHHHHHhcccc---chhHH----------HHHHh-ccCCCCCeEEeCCCCCCCCCCCCcccCeEEecCCCCCC
Confidence 333456788887764211 11111 11111 112334456677654111 11235556778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCCCCCcEEEecCccccHHHHHHHHHHhCCCCCCCCCCCchhhhhHHHhhh
Q psy2902 372 RAKLELLVDELITRTIEPCRIAIKD-AGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRDINPDEAVAVGAAIQGS 450 (945)
Q Consensus 372 r~~~e~~~~~~i~~i~~~i~~~l~~-~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~~~~~~~p~~avA~GAa~~a~ 450 (945)
|.++.+++-+.+..-...+.+.|++ .+.+ ++.|.++||+|++++|.|++++.||.++.++ ...|+.|+|||+.|+
T Consensus 373 ~~~i~RAvlEgia~~~r~~le~l~~~~g~~---~~~i~v~GGgaks~~~~Qi~ADvlg~pV~~~-~~~E~~alGAA~lA~ 448 (526)
T 3ezw_A 373 ANHIIRATLESIAYQTRDVLEAMQADSGIR---LHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAYLAG 448 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---CCEEEEECchhhCHHHHHHHHHHHCCEEEeC-CCCchHHHHHHHHHH
Confidence 9999887777666666666666653 5654 6899999999999999999999999998754 456899999999999
Q ss_pred hccCCCCce
Q psy2902 451 VLSGDRKDL 459 (945)
Q Consensus 451 ~~~~~~~~~ 459 (945)
...|..+++
T Consensus 449 ~a~G~~~~~ 457 (526)
T 3ezw_A 449 LAVGFWQNL 457 (526)
T ss_dssp HHTTSSSCG
T ss_pred HHhCCCCCH
Confidence 888854443
No 49
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=98.99 E-value=2.6e-10 Score=132.36 Aligned_cols=201 Identities=21% Similarity=0.203 Sum_probs=120.0
Q ss_pred HHHHHcCC----ccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEecCC------
Q psy2902 225 DAGRIAGL----EVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGD------ 294 (945)
Q Consensus 225 ~Aa~~AGl----~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~------ 294 (945)
++|+..|| +++....+..||+++.+ .. .+ .+++-+|.+++-..+..-......+.+.......+
T Consensus 255 ~~A~~~Gl~~g~pV~~g~~D~~aa~lG~g-~~---~g--~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 328 (515)
T 3i8b_A 255 PAIAGKNVEGGCLLAPGGGDNAMASLGLG-MA---VG--DVSISLGTSGVAAAISENPTYDLTGAVSGFADCTGHYLPLA 328 (515)
T ss_dssp TTTTTTTSTTCCEECCCEEHHHHHHHHTT-CC---TT--EEEEEESSSEEEEECBSSCCCCTTSCSEEEECSSSSEEEEE
T ss_pred HHHHHhCCCCCCeEEEECchHHHHHhhCC-CC---CC--cEEEEechhhhhhcccCccccCCCCcEEeeecCCCCEEEee
Confidence 34444454 56677899999999987 32 23 34445777665543322111111122221111111
Q ss_pred -CCCchHHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeeccC--------CCCeE
Q psy2902 295 -TFLGGEDFDQRIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSN--------GAPVH 365 (945)
Q Consensus 295 -~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~--------~~~~~ 365 (945)
...||. +++|+++.+. . + +..|.+.++++ .......+.+|++.... +...+
T Consensus 329 ~~~~gg~-----~l~w~~~~~~----~----~---~~~l~~~a~~~----~~g~~gl~~lP~~~Ger~P~~~~arg~~~G 388 (515)
T 3i8b_A 329 CTINGSR-----ILDAGRAALG----V----D---YDELAKLAFAS----KPGANGITLVPYFDGERTPNRPNATATFSG 388 (515)
T ss_dssp EESCSTH-----HHHHHHHHHT----C----C---HHHHHHHHHHS----CTTGGGCEEECCTTCBTTTTBTTCCCEEES
T ss_pred ecccHHH-----HHHHHHHHhC----C----C---HHHHHHHHHhC----CCCCCCeEEecCCCCCcCCCCcCcceEEec
Confidence 122443 4577776653 1 1 33444444433 33344556666653211 11122
Q ss_pred EEEEE-cHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHhCCCCCCCCCCCchhhhh
Q psy2902 366 LNLKI-TRAKLELLVDELITRTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRDINPDEAVAVG 444 (945)
Q Consensus 366 ~~~~i-tr~~~e~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~~~~~~~p~~avA~G 444 (945)
++... ++.++.+.+-+.+......+.+.|++.+. .++.|+++||+++++.|.+++++.||.++... .+.++.|+|
T Consensus 389 l~~~~~~~~~l~RAvlEgia~~~r~~l~~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alG 464 (515)
T 3i8b_A 389 MTLANTTRENLARAFVEGLLCSQRDCLELIRSLGA---SITRILLIGGGAKSEAIRTLAPSILGMDVTRP-ATDEYVAIG 464 (515)
T ss_dssp CCTTTCSHHHHHHHHHHHHHHHHHHHHHHHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-CCCCHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEECchhcCHHHHHHHHHHhCCceEec-CCcccHHHH
Confidence 33334 78888877776666666666667777654 36899999999999999999999999998753 457799999
Q ss_pred HHHhhhhccCC
Q psy2902 445 AAIQGSVLSGD 455 (945)
Q Consensus 445 Aa~~a~~~~~~ 455 (945)
||++|+...+.
T Consensus 465 AA~lA~~a~G~ 475 (515)
T 3i8b_A 465 AARQAAWVLSG 475 (515)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHcCC
Confidence 99999877664
No 50
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=98.93 E-value=2.9e-09 Score=104.82 Aligned_cols=144 Identities=17% Similarity=0.153 Sum_probs=93.5
Q ss_pred CCCCccceeeccccccccccceeeEeeccccccCCCCCccccccCcCcc--cCCCCCCCceEeEeeceeeeeecCCCCCC
Q psy2902 686 GSNGKDLRYNLEITLEQAAYGFNTSIRVPSWDICKSCYGNGAKKGTSPI--SCFTCSGQGQVRMQQGFFSIQQTCPKCQG 763 (945)
Q Consensus 686 ~~~g~~~~~~l~~~~~~~~~g~~~~~~~~~~~~C~~C~G~G~~~~~~~~--~C~~C~G~G~~~~~~~~~~~~~~C~~C~G 763 (945)
++...++.++|++.|.+............ .|+|.|........ .=|.=--.|....-.| ..+.-+. ..
T Consensus 3 ~d~~~~l~islee~~~G~~k~i~i~~~c~------~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G---~G~~~~~-g~ 72 (181)
T 3agx_A 3 PPVTHDLRVSLEEIYSGCTKKMKISHKRL------NPDGKSIRNEDKILTIEVKKGWKEGTKITFPK---EGDQTSN-NI 72 (181)
T ss_dssp ---CEEEEECHHHHHHCEEEEEEEEEEEE------CTTSSCEEEEEEEEEEEECTTCCTTCEEEETT---CSCCCSS-SC
T ss_pred CCEEEEEEEEHHHhcCCcEEEEEEecccC------CCCCceEEEEeEEEEEEECCCccCCcEEEEee---ccccCCC-CC
Confidence 35668899999999999998888776665 38998875432111 0000011122111000 0000010 11
Q ss_pred ce------EEeecCCcccCCCceEee--------------------eeeEEEEeecCCCCCeEEEEcCCCCCCCC-CCCC
Q psy2902 764 AG------KVIPHPCLDCNGIGRIKR--------------------NKTLEVKIPAGIENNMRIRSTGNGEPGLN-GGSN 816 (945)
Q Consensus 764 ~g------~~~~~~c~~c~G~g~~~~--------------------~~~l~v~ip~G~~~g~~i~~~g~G~~~~~-~~~~ 816 (945)
.| .+.+|+.|+|+|.++..+ .+.+.|++|+|+++|++++++|+|||..+ ++.+
T Consensus 73 ~GDl~v~i~~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~ 152 (181)
T 3agx_A 73 PADIVFVLKDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKR 152 (181)
T ss_dssp CCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECSCCCTTCEEEETTCSCBCSSSTTSB
T ss_pred cccEEEEEEEeccccceeeCCcEEEEEEcCHHHHhCCCEEEeECCCCCEEEEECCCccCCCcEEEECCcCCCcCCCCCCc
Confidence 22 147899999999655444 23568999999999999999999999765 3568
Q ss_pred ccEEEEEEEecCCcccccCCCce
Q psy2902 817 GNLYIEIHIKPHKVFERDGDDLH 839 (945)
Q Consensus 817 Gdl~i~i~v~~~~~~~r~g~dl~ 839 (945)
|||||+|+|..|..++.++.+++
T Consensus 153 GDL~V~~~V~~P~~ls~~q~~~l 175 (181)
T 3agx_A 153 GDLIIEFEVIFPERIPQTSRTVL 175 (181)
T ss_dssp CCEEEEEEEECCSCCCHHHHHHH
T ss_pred CCEEEEEEEECCCCCCHHHHHHH
Confidence 99999999999998887765543
No 51
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=98.92 E-value=5.7e-09 Score=122.66 Aligned_cols=228 Identities=17% Similarity=0.148 Sum_probs=123.1
Q ss_pred HHHHHHHcCC----ccceecchhHHHHHHh-ccCCCCCCCc-----eEEEEEeCCcceEEEEEEEEeecCCceEE-EEEe
Q psy2902 223 TKDAGRIAGL----EVKRIINEPTAAALAF-GLDKSGKSDR-----NIVVYDLGGGTFDVSIIEIADVDGEKQFE-VLST 291 (945)
Q Consensus 223 l~~Aa~~AGl----~~v~li~Ep~AAAl~~-~~~~~~~~~~-----~vlVvD~GggT~dvsv~~~~~~~~~~~~~-vl~~ 291 (945)
..++|+..|| +++....+..|++++. +... .+++ ..+++-+|.+++-..+..- .....+... ....
T Consensus 236 t~~~A~~~GL~~g~pV~~g~gD~~aa~lg~~G~~~--~~G~~~~~~~~~~~~~GTs~~~~~~~~~-~~~~~~~~~~~~~~ 312 (554)
T 3l0q_A 236 SQRAASEMGLIPGTAVSVSIIDAHAGTIGILGASG--VTGENANFDRRIALIGGTSTAHMAMSRS-AHFISGIWGPYYSA 312 (554)
T ss_dssp CHHHHHHHTCCTTCEEBCCEEHHHHHHHHHTTCCC--TTSCCCCTTTEEEEECSSSEEEEEEESS-CCCCTTSEEEEETS
T ss_pred CHHHHHHhCCCCCCeEEEeChHHHhHHhhcccccc--CCCccccccceEEEEecchheeeeecCC-ccccCCcceeeccc
Confidence 4566777666 4666778889998875 4431 1221 1344446766544433221 111111111 1100
Q ss_pred --cCCCC-CchHHHHHHHHHHHHHHHHHH---hCCCCccCHHHHHHHHHHHHHHHHHhcC---Ccceeeeeceeecc---
Q psy2902 292 --NGDTF-LGGEDFDQRIIDYILDEFNKI---NGIDLRKDSIALQRIKASAERAKIELSS---SKQTEINEPYIAMS--- 359 (945)
Q Consensus 292 --~~~~~-lGG~~iD~~l~~~l~~~~~~~---~~~~~~~~~~~~~~L~~~~e~~K~~Ls~---~~~~~i~i~~~~~~--- 359 (945)
.+... .|+.......++|+++.+... ...........+..|.+.++++...... .....+.+|++...
T Consensus 313 ~~~~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gl~flP~~~Ger~P 392 (554)
T 3l0q_A 313 ILPEYWLNEGGQSATGALIDHIIQSHPCYPALLEQAKNKGETIYEALNYILRQMAGEPENIAFLTNDIHMLPYFHGNRSP 392 (554)
T ss_dssp SSTTCEEEEEEESCSHHHHHHHHHTSTTHHHHHHHHHHTTCCHHHHHHHHHHHHHSSGGGGGGGGTTCCEECCTTCBCSS
T ss_pred ccCCceEecchhhhhHHHHHHHHHhcccchHHHHHHHhcCCCHHHHHHHHHHhcCCCCCccccccCceEEcccccCCCCC
Confidence 11011 133333344567776654210 0000000011344455555554321111 13445667765421
Q ss_pred ------CCCCeEEEEEEcHHHHH---HHHHHHHHHHHHHHHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHhCCC
Q psy2902 360 ------NGAPVHLNLKITRAKLE---LLVDELITRTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKD 430 (945)
Q Consensus 360 ------~~~~~~~~~~itr~~~e---~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~ 430 (945)
.+...+++...+|++|- +.+-+.+......+.+.|++.+. .++.|.++||+|++++|.|++++.||.+
T Consensus 393 ~~d~~arg~~~Gl~~~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~---~~~~i~~~GG~aks~~~~Qi~ADv~g~p 469 (554)
T 3l0q_A 393 RANPNLTGIITGLKLSTTPEDMALRYLATIQALALGTRHIIETMNQNGY---NIDTMMASGGGTKNPIFVQEHANATGCA 469 (554)
T ss_dssp SCBTTCCCEECSCCSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC---CCCEEEEESGGGGCHHHHHHHHHHHCCE
T ss_pred CCCCCCcEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEeCccccCHHHHHHHHHhhCCe
Confidence 11223455677899994 44444444444445555655443 4789999999999999999999999999
Q ss_pred CCCCCCCCchhhhhHHHhhhhccCCCC
Q psy2902 431 PRRDINPDEAVAVGAAIQGSVLSGDRK 457 (945)
Q Consensus 431 ~~~~~~p~~avA~GAa~~a~~~~~~~~ 457 (945)
+..+. ..++.|+|||++|+...|..+
T Consensus 470 V~~~~-~~e~~alGAA~lA~~a~G~~~ 495 (554)
T 3l0q_A 470 MLLPE-ESEAMLLGSAMMGTVAAGVFE 495 (554)
T ss_dssp EEEES-CSCHHHHHHHHHHHHHTTSSS
T ss_pred EEecC-CCcchHHHHHHHHHHHcCCcC
Confidence 87543 567999999999998777543
No 52
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=98.92 E-value=1e-09 Score=127.79 Aligned_cols=209 Identities=15% Similarity=0.104 Sum_probs=121.1
Q ss_pred HcCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEE-eecCCceEEEEEec-CC----CCCchHHH
Q psy2902 229 IAGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIA-DVDGEKQFEVLSTN-GD----TFLGGEDF 302 (945)
Q Consensus 229 ~AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~-~~~~~~~~~vl~~~-~~----~~lGG~~i 302 (945)
.+|++++....+..||+++.+... .+. +++-+|.+++-.....-. .....+.+..++.. .+ ...|+...
T Consensus 255 ~~g~pV~~g~~D~~aa~~g~g~~~---~g~--~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 329 (520)
T 4e1j_A 255 GAAIPILGVAGDQQAATIGQACFK---PGM--LKSTYGTGCFALLNTGKDMVRSKNRLLTTIAYRLDGETTYALEGSIFV 329 (520)
T ss_dssp TSCCBEEEECCHHHHHHHHTTCCS---TTC--EEEEESSSEEEEEECTTCCCCCSSSCEEEEEEEETTEEEEEEEEEESC
T ss_pred CCCCeEEEECCcHHHHHHhCCCCC---CCc--EEEEecCchheEEecCCccccCCCceeeEEeEecCCCceEEEcchHhh
Confidence 368888888999999999987644 233 333456654333322000 01112222211111 00 01123333
Q ss_pred HHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeecc---------CCCCeEEEEEEcHH
Q psy2902 303 DQRIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMS---------NGAPVHLNLKITRA 373 (945)
Q Consensus 303 D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~---------~~~~~~~~~~itr~ 373 (945)
....++|+++.+... . .+..|.+.++.+ ......+.+|++... .+...+++...+|.
T Consensus 330 ~G~~~~W~~~~~~~~------~---~~~~l~~~a~~~-----~~~~gl~~lP~l~Ger~P~~d~~arg~~~Gl~~~~~~~ 395 (520)
T 4e1j_A 330 AGAAVQWLRDGLKVI------K---AAPDTGSLAESA-----DPSQEVYLVPAFTGLGAPHWDPDARGAIFGMTRNTGPA 395 (520)
T ss_dssp SHHHHHHHHHTTCCC--------------CHHHHHTS-----CTTCCCEEECCTTCBCTTTCBTTCCCEEEEECTTCCHH
T ss_pred HHHHHHHHHHHcCCc------c---cHHHHHHHHhcC-----CCCCcEEEEcCccCCCCCCCCCCCCEEEecccCCCCHH
Confidence 334678888776321 0 122233333222 234456777775311 12223555567899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCC-CCCCCCcEEEecCccccHHHHHHHHHHhCCCCCCCCCCCchhhhhHHHhhhhc
Q psy2902 374 KLELLVDELITRTIEPCRIAIKDAGI-KVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRDINPDEAVAVGAAIQGSVL 452 (945)
Q Consensus 374 ~~e~~~~~~i~~i~~~i~~~l~~~~~-~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~~~~~~~p~~avA~GAa~~a~~~ 452 (945)
++-+.+-+.+..-...+.+.|++.+. .. .++.|.++||++++++|.|++++.||.++..+ .+.++.|+|||++|+..
T Consensus 396 ~l~RAvlEgia~~~r~~l~~l~~~~~~~g-~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA~~a 473 (520)
T 4e1j_A 396 EFARAALEAVCYQTRDLLEAMHKDWRRNG-NDTVLRVDGGMVASDWTMQRLSDLLDAPVDRP-VILETTALGVAWLAGSR 473 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCC------CCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCC-CcceEEEeCccccCHHHHHHHHHHhCCeEEec-CCCccHHHHHHHHHHHH
Confidence 98887777666666666666665410 01 46899999999999999999999999998754 45779999999999988
Q ss_pred cCCCCc
Q psy2902 453 SGDRKD 458 (945)
Q Consensus 453 ~~~~~~ 458 (945)
.|..++
T Consensus 474 ~G~~~~ 479 (520)
T 4e1j_A 474 AGVWPN 479 (520)
T ss_dssp HTSSCC
T ss_pred cCCcCC
Confidence 775443
No 53
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=98.87 E-value=1.6e-09 Score=125.83 Aligned_cols=206 Identities=16% Similarity=0.147 Sum_probs=121.1
Q ss_pred cCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEee-cCCceEEEEEec-CC---C-CCchHHHH
Q psy2902 230 AGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADV-DGEKQFEVLSTN-GD---T-FLGGEDFD 303 (945)
Q Consensus 230 AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~-~~~~~~~vl~~~-~~---~-~lGG~~iD 303 (945)
+|++++....+..||+++.+... .+. +++-+|.+++-.....-... ...+.+...+.. .+ . ..|+....
T Consensus 236 ~g~pV~~g~~D~~aa~~g~g~~~---~g~--~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~ 310 (506)
T 3h3n_X 236 SEVPIAGMAGDQQAALFGQMAFE---KGM--IKNTYGTGAFIVMNTGEEPQLSDNDLLTTIGYGINGKVYYALEGSIFVA 310 (506)
T ss_dssp CCCEEEEEEEHHHHHHHHTTCCS---TTC--EEEEESSSEEEEEEEETCCCSCCTTSEEEEEEEETTEEEEEEEEEECCS
T ss_pred CCCeEEEECCcHHHHHHhCCCCC---CCc--EEEEecchheeeeecCCccccCCCceEEEeeeecCCCCEEEEecchhhH
Confidence 67888888899999999987644 233 33446665543322221111 122222211111 10 0 01222222
Q ss_pred HHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeecc---------CCCCeEEEEEEcHHH
Q psy2902 304 QRIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMS---------NGAPVHLNLKITRAK 374 (945)
Q Consensus 304 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~---------~~~~~~~~~~itr~~ 374 (945)
..+++|+++.+... .+ +..|.+.++.+ .. ....+.+|++... .+...+++...++.+
T Consensus 311 G~~~~W~~~~~~~~------~~---~~~l~~~a~~~----~~-~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~ 376 (506)
T 3h3n_X 311 GSAIQWLRDGLRMI------ET---SPQSEELAAKA----KG-DNEVYVVPAFTGLGAPYWDSEARGAVFGLTRGTTKED 376 (506)
T ss_dssp SHHHHHHHHTSCCC------SS---TTHHHHHHTTC----CS-CSCCEEECCTTCBCTTTCBTTCCCEEECCCTTCCHHH
T ss_pred HHHHHHHHHHcCCC------Cc---HHHHHHHHhcC----CC-CCceEEeccccCCCCCccCCCCCEEEEccCCCCCHHH
Confidence 23678888766321 01 11222222221 22 2455677765321 111234445668999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-cCCCCCCCCcEEEecCccccHHHHHHHHHHhCCCCCCCCCCCchhhhhHHHhhhhcc
Q psy2902 375 LELLVDELITRTIEPCRIAIKD-AGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRDINPDEAVAVGAAIQGSVLS 453 (945)
Q Consensus 375 ~e~~~~~~i~~i~~~i~~~l~~-~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~~~~~~~p~~avA~GAa~~a~~~~ 453 (945)
|-+.+-+.+......+.+.|++ .+.+ ++.|.++||++++++|.+++++.||.++... .+.++.|+|||+.|+...
T Consensus 377 l~RAvlEgia~~~r~~~~~l~~~~g~~---~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~ 452 (506)
T 3h3n_X 377 FVRATLQAVAYQSKDVIDTMKKDSGID---IPLLKVDGGAAKNDLLMQFQADILDIDVQRA-ANLETTALGAAYLAGLAV 452 (506)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSC---CCEEEEESGGGGCHHHHHHHHHHHTSEEEEC-SSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC---CCEEEEecccccCHHHHHHHHHHhCCeEEec-CCCcchhHHHHHHHHHHh
Confidence 8887777666666666666665 4543 6899999999999999999999999998653 467899999999999877
Q ss_pred CCCCc
Q psy2902 454 GDRKD 458 (945)
Q Consensus 454 ~~~~~ 458 (945)
|..++
T Consensus 453 G~~~~ 457 (506)
T 3h3n_X 453 GFWKD 457 (506)
T ss_dssp TSSCS
T ss_pred CccCC
Confidence 75443
No 54
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=98.86 E-value=9e-10 Score=128.05 Aligned_cols=205 Identities=17% Similarity=0.153 Sum_probs=118.9
Q ss_pred cCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEe-ecCCceEEEEEecCC-----CCCchHHHH
Q psy2902 230 AGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIAD-VDGEKQFEVLSTNGD-----TFLGGEDFD 303 (945)
Q Consensus 230 AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~-~~~~~~~~vl~~~~~-----~~lGG~~iD 303 (945)
+|++++....+..||+++.+... .+. +++-+|.+++-+....-.. ....+.+...+..-+ ...|+....
T Consensus 234 ~g~pV~~g~~D~~aa~~g~g~~~---~g~--~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 308 (510)
T 2p3r_A 234 TRIPISGIAGDQQAALFGQLCVK---EGM--AKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMA 308 (510)
T ss_dssp CCEEEEEEEEHHHHHHHHTTCCS---TTC--EEEEESSSEEEEEECTTCCCCCSSSCEEEEEECTTSCEEEEEEEEESCS
T ss_pred CCCeEEEECchHHHHHHhcCCCC---CCc--EEEeecchheeEEecCCccccCCCCeeEEEeeecCCCceEEEccchhhH
Confidence 56778888889999999987644 233 3334565543222211000 011222222221100 011223333
Q ss_pred HHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeecc---------CCCCeEEEEEEcHHH
Q psy2902 304 QRIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMS---------NGAPVHLNLKITRAK 374 (945)
Q Consensus 304 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~---------~~~~~~~~~~itr~~ 374 (945)
..+++|+++.+.... + +..|.+.++.+ . .....+.+|++... .+...+++...++.+
T Consensus 309 G~~~~W~~~~~~~~~--~-------~~~l~~~a~~~----~-~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~ 374 (510)
T 2p3r_A 309 GASIQWLRDEMKLIN--D-------AYDSEYFATKV----Q-NTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANH 374 (510)
T ss_dssp HHHHHHHHHTSCCCC--S-------SSCHHHHHTTS----S-SCTTCEEECCTTCCBTTTCCTTCCEEEEEECTTCCHHH
T ss_pred HHHHHHHHHHccCCC--c-------HHHHHHHHhhC----C-CCCceEEeCcccCCCCCCCCCCCCEEEECCCCCCCHHH
Confidence 347788887764210 1 11122222221 1 23445666765411 111234445568888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHc-CCCCCCCCcEEEecCccccHHHHHHHHHHhCCCCCCCCCCCchhhhhHHHhhhhcc
Q psy2902 375 LELLVDELITRTIEPCRIAIKDA-GIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRDINPDEAVAVGAAIQGSVLS 453 (945)
Q Consensus 375 ~e~~~~~~i~~i~~~i~~~l~~~-~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~~~~~~~p~~avA~GAa~~a~~~~ 453 (945)
|-+.+-+.+......+.+.|++. +.+ ++.|.++||+++++.|.+++++.+|.++... .+.++.|+|||+.|+...
T Consensus 375 l~RAvlEgia~~~r~~~~~l~~~~g~~---~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~ 450 (510)
T 2p3r_A 375 IIRATLESIAYQTRDVLEAMQADSGIR---LHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAYLAGLAV 450 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCC---CSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC---ccEEEEeCchhcCHHHHHHHHHHhCCceEec-CCCCcHHHHHHHHHHHHh
Confidence 88877776666666666666653 543 6799999999999999999999999998754 367799999999999877
Q ss_pred CCCC
Q psy2902 454 GDRK 457 (945)
Q Consensus 454 ~~~~ 457 (945)
|..+
T Consensus 451 G~~~ 454 (510)
T 2p3r_A 451 GFWQ 454 (510)
T ss_dssp TSSS
T ss_pred CccC
Confidence 7543
No 55
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=98.84 E-value=1.1e-09 Score=127.12 Aligned_cols=206 Identities=15% Similarity=0.151 Sum_probs=119.5
Q ss_pred cCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEee-cCCceEEEEEec-CC---C-CCchHHHH
Q psy2902 230 AGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADV-DGEKQFEVLSTN-GD---T-FLGGEDFD 303 (945)
Q Consensus 230 AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~-~~~~~~~vl~~~-~~---~-~lGG~~iD 303 (945)
+|++++....+..||+++.+... .+. +++-+|.+++-.....-... ...+.+...+.. .+ . ..|+....
T Consensus 237 ~g~pV~~g~~D~~aa~~g~g~~~---~g~--~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 311 (501)
T 3g25_A 237 QEVPIAGVAGDQQAALFGQACFE---RGD--VKNTYGTGGFMLMNTGDKAVKSESGLLTTIAYGIDGKVNYALEGSIFVS 311 (501)
T ss_dssp CCCEEEEEEEHHHHHHHHTTCCS---TTC--EEEEESSSEEEEEECTTSCCCCSSSCEEEEEEEETTEEEEEEEEEESCS
T ss_pred CCCeEEEECccHHHHHHhCCCCC---CCc--EEEEccchhheeeecCCccccCCCCeEEEeeEecCCccEEEEecccccH
Confidence 68888888899999999887544 233 33345655432222110000 112222211111 10 0 01222222
Q ss_pred HHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeeccC---------CCCeEEEEEEcHHH
Q psy2902 304 QRIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSN---------GAPVHLNLKITRAK 374 (945)
Q Consensus 304 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~---------~~~~~~~~~itr~~ 374 (945)
..+++|+++.+... .+ +..|.+.++.+ .. ....+.+|++.... +...+++...++.+
T Consensus 312 G~~~~W~~~~~~~~------~~---~~~l~~~a~~~----~~-~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~ 377 (501)
T 3g25_A 312 GSAIQWLRDGLRMI------NS---APQSESYATRV----DS-TEGVYVVPAFVGLGTPYWDSEARGAIFGLTRGTEKEH 377 (501)
T ss_dssp THHHHHHHHTSCCC------SS---GGGHHHHHTTS----SC-CTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHH
T ss_pred HHHHHHHHHHcCCC------Cc---HHHHHHHHhhC----CC-CCeEEEecccccCCCCCCCCCCCEEEEccCCCCCHHH
Confidence 23678888766420 01 11222222221 22 24556677654111 11224445568888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-cCCCCCCCCcEEEecCccccHHHHHHHHHHhCCCCCCCCCCCchhhhhHHHhhhhcc
Q psy2902 375 LELLVDELITRTIEPCRIAIKD-AGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRDINPDEAVAVGAAIQGSVLS 453 (945)
Q Consensus 375 ~e~~~~~~i~~i~~~i~~~l~~-~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~~~~~~~p~~avA~GAa~~a~~~~ 453 (945)
|-+.+-+.+......+.+.|++ .+.+ ++.|.++||++++++|.+++++.||.++... .+.++.|+|||++|+...
T Consensus 378 l~RAvlEgia~~~~~~~~~l~~~~g~~---~~~i~~~GG~aks~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~la~~a~ 453 (501)
T 3g25_A 378 FIRATLESLCYQTRDVMEAMSKDSGID---VQSLRVDGGAVKNNFIMQFQADIVNTSVERP-EIQETTALGAAFLAGLAV 453 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSCC---CSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC---CcEEEEecchhcCHHHHHHHHHHhCCceEec-CCCcchHHHHHHHHHHHh
Confidence 8887777666666666666665 4543 6899999999999999999999999998644 467899999999999887
Q ss_pred CCCCc
Q psy2902 454 GDRKD 458 (945)
Q Consensus 454 ~~~~~ 458 (945)
|..++
T Consensus 454 G~~~~ 458 (501)
T 3g25_A 454 GFWES 458 (501)
T ss_dssp TSSSC
T ss_pred CccCC
Confidence 75443
No 56
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=98.81 E-value=2.8e-09 Score=95.17 Aligned_cols=83 Identities=20% Similarity=0.344 Sum_probs=69.7
Q ss_pred CCccceeeccccccccccceeeEeeccccccCCCCCccccccCcCcccCCCCCCCceEeEeeceeeeeecCCCCCCceEE
Q psy2902 688 NGKDLRYNLEITLEQAAYGFNTSIRVPSWDICKSCYGNGAKKGTSPISCFTCSGQGQVRMQQGFFSIQQTCPKCQGAGKV 767 (945)
Q Consensus 688 ~g~~~~~~l~~~~~~~~~g~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~~~~~C~~C~G~g~~ 767 (945)
.|.|+++++.++|.++.+|+++.+...
T Consensus 10 ~G~DL~~~~~Isl~eAl~G~~i~v~tl----------------------------------------------------- 36 (109)
T 3i38_A 10 VGHNLEIVLPLAPWEAALGAKVTVPTL----------------------------------------------------- 36 (109)
T ss_dssp ETTEEEEEEEECHHHHHHCEEEEECCS-----------------------------------------------------
T ss_pred ECCEEEEEEEcCHHHHhCCCEEEEEcC-----------------------------------------------------
Confidence 467999999999999999998776521
Q ss_pred eecCCcccCCCceEeeeeeEEEEeecCCCCCeEEEEcCCCCCCCCCCCCccEEEEEEEecCCcccccCCCceeE
Q psy2902 768 IPHPCLDCNGIGRIKRNKTLEVKIPAGIENNMRIRSTGNGEPGLNGGSNGNLYIEIHIKPHKVFERDGDDLHYE 841 (945)
Q Consensus 768 ~~~~c~~c~G~g~~~~~~~l~v~ip~G~~~g~~i~~~g~G~~~~~~~~~Gdl~i~i~v~~~~~~~r~g~dl~~~ 841 (945)
+| .++|+||+|+++|++++++|+|||. .+ .+|||||+|+|..|..++.++.+++..
T Consensus 37 --------dG--------~~~v~ip~g~~~G~~~rl~G~G~p~-~~-~~GDL~v~~~V~~P~~Ls~~q~~~l~~ 92 (109)
T 3i38_A 37 --------KE--------SILLTVPPGSQAGQRLRIKGKGLVS-KT-HTGDLFAVIKIVMPTKPDEKARELWQQ 92 (109)
T ss_dssp --------SS--------CEEEEECTTCCTTCEEEETTCSCBC-SS-CBCCEEEEEEECCCSSCCHHHHHHHHH
T ss_pred --------CC--------CEEEeeCCCcCcCeEEEECCccCCC-CC-CCcCEEEEEEEECCCCCCHHHHHHHHH
Confidence 01 4789999999999999999999997 33 799999999999999988777665543
No 57
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=98.80 E-value=2.1e-09 Score=124.73 Aligned_cols=203 Identities=14% Similarity=0.113 Sum_probs=112.7
Q ss_pred cCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEec-CC----CCCchHHHHH
Q psy2902 230 AGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTN-GD----TFLGGEDFDQ 304 (945)
Q Consensus 230 AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~-~~----~~lGG~~iD~ 304 (945)
.|++++....+..||+++.+... .+. +++-+|.+++-..+..-......+.+...+.. .+ ...|+...-.
T Consensus 229 ~g~pV~~g~~D~~aa~~g~g~~~---~g~--~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G 303 (497)
T 2zf5_O 229 AEIPVSGDAGDQQAALFGQAAFE---AGM--VKATYGTGSFILVNTDKMVLYSDNLLTTIAWGLNGRVSYALEGSIFVTG 303 (497)
T ss_dssp SCCEEEEEEEHHHHHHHHTTCCS---TTC--EEEEESSSEEEEEEEETCCCCCTTSEEEEEEEETTEEEEEEEEEESCSH
T ss_pred CCCeEEEEccHHHHHHHhCCCCC---CCc--EEEEcchhheeeEECCCCccCCCCcEEEEEEEcCCCCEEEEechhhhHH
Confidence 67888888899999999887644 233 33345555444333221011111222222111 00 0112222223
Q ss_pred HHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeeccC---------CCCeEEEEEEcHHHH
Q psy2902 305 RIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSN---------GAPVHLNLKITRAKL 375 (945)
Q Consensus 305 ~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~---------~~~~~~~~~itr~~~ 375 (945)
..++|+.+.+.. . .+ +..|.+.++.+ . .....+.+|++.... +...+++...++.++
T Consensus 304 ~~~~w~~~~~~~----~--~~---~~~l~~~a~~~----~-~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l 369 (497)
T 2zf5_O 304 AAVQWLRDGIKI----I--KH---ASETEELATKL----E-SNEGVYFVPAFVGLGAPYWDQFARGIIIGITRGTGREHL 369 (497)
T ss_dssp HHHHHHHHTSCC----C--SC---GGGHHHHHTTS----S-SCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHH
T ss_pred HHHHHHHHHhCC----C--Cc---HHHHHHHHhhC----C-CCCceEEecCcCCCCCCCCCCCCCEEEEeCCCCCCHHHH
Confidence 346787765531 0 11 11222222221 1 233345566653111 111233445578887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHhCCCCCCCCCCCchhhhhHHHhhhhccCC
Q psy2902 376 ELLVDELITRTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRDINPDEAVAVGAAIQGSVLSGD 455 (945)
Q Consensus 376 e~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~~~~~~~p~~avA~GAa~~a~~~~~~ 455 (945)
-+.+-+.+......+.+.|+..+ .++.|.++||+++++.|.+++++.+|.++..+. +.++.|+|||+.|+...|.
T Consensus 370 ~rAvlEgia~~~~~~l~~l~~~~----~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~-~~e~~alGaA~lA~~~~g~ 444 (497)
T 2zf5_O 370 ARATLEAIAYLTRDVVDEMEKLV----QIKELRVDGGATANDFLMQFQADILNRKVIRPV-VKETTALGAAYLAGLAVDY 444 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTS----CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEES-CSCHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----CcceEEEeCccccCHHHHHHHHhhcCCeEEEcC-CCcchHHHHHHHHHHHhCc
Confidence 76655555444444444444332 578999999999999999999999999987544 4669999999999887764
Q ss_pred C
Q psy2902 456 R 456 (945)
Q Consensus 456 ~ 456 (945)
.
T Consensus 445 ~ 445 (497)
T 2zf5_O 445 W 445 (497)
T ss_dssp S
T ss_pred c
Confidence 3
No 58
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=98.79 E-value=1.9e-09 Score=116.25 Aligned_cols=167 Identities=17% Similarity=0.164 Sum_probs=89.1
Q ss_pred cccccccccccccccCCCCCCCCCCCCCCCCccceeeccccccccccceeeEeeccccccCCCCCccccccCcCcccCCC
Q psy2902 659 ASNFADAFGDIFGDIFGSNRDRDNNNKGSNGKDLRYNLEITLEQAAYGFNTSIRVPSWDICKSCYGNGAKKGTSPISCFT 738 (945)
Q Consensus 659 ~~~f~d~f~~~F~~~~g~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~g~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~ 738 (945)
.+-|+++|+.. +...+..+ ..++.+...++.++|+..+.+..........+.+..-...-. .. ......-|.
T Consensus 118 ~diF~~~Fg~~-g~~~~~~~---~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~-~~---~~l~V~IP~ 189 (329)
T 3lz8_A 118 DDIFSSMFGQQ-AHQRRRQH---AARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESE-TP---KTLNVKIPA 189 (329)
T ss_dssp -----------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEE-EE---EEEEEEECT
T ss_pred hhhhHhhhcCc-CCCCCCCC---cCCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEe-cc---eEEEEeCCC
Confidence 34567778653 22222222 245678889999999999998877666665443211000000 00 000000011
Q ss_pred CCCCceEeEeeceeeeeecCCC--CC-CceE------EeecCCcccCCCceEee---------------eee----EEEE
Q psy2902 739 CSGQGQVRMQQGFFSIQQTCPK--CQ-GAGK------VIPHPCLDCNGIGRIKR---------------NKT----LEVK 790 (945)
Q Consensus 739 C~G~G~~~~~~~~~~~~~~C~~--C~-G~g~------~~~~~c~~c~G~g~~~~---------------~~~----l~v~ 790 (945)
---.|... ++...-.. -+ ..|- +.+|+.|+|.|..+..+ .++ ++|+
T Consensus 190 Gv~~G~~I------rl~G~G~~g~~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~v~l~ 263 (329)
T 3lz8_A 190 GVVDGQRI------RLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKESILLT 263 (329)
T ss_dssp TCCTTCEE------EESSCSCCC---CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSCEEEE
T ss_pred CCCCCCEE------EEcccccCCCCCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCCEEEE
Confidence 11111110 01000000 00 1221 36899999999554444 333 4799
Q ss_pred eecCCCCCeEEEEcCCCCCCCCCCCCccEEEEEEEecCCcccccCCCceeE
Q psy2902 791 IPAGIENNMRIRSTGNGEPGLNGGSNGNLYIEIHIKPHKVFERDGDDLHYE 841 (945)
Q Consensus 791 ip~G~~~g~~i~~~g~G~~~~~~~~~Gdl~i~i~v~~~~~~~r~g~dl~~~ 841 (945)
||+|+++|++++++|+|||.. +.+|||||+|+|..|+.++.++..++..
T Consensus 264 ip~gt~~g~~~rl~G~GmP~~--~~rGDL~v~~~V~~P~~l~~~q~~~l~~ 312 (329)
T 3lz8_A 264 VPPGSQAGQRLRIKGKGLVSK--THTGDLFAVIKIVMPTKPDEKARELWQQ 312 (329)
T ss_dssp ECTTCCTTCEEEETTCSCBCS--SCBCCEEEEEEECCCSSCCHHHHHHHHH
T ss_pred ECCCCCCCCEEEEcCCCCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHH
Confidence 999999999999999999965 4689999999999999988777666544
No 59
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=98.78 E-value=3.7e-09 Score=96.49 Aligned_cols=85 Identities=31% Similarity=0.315 Sum_probs=67.0
Q ss_pred CCccceeeccccccccccceeeEeeccccccCCCCCccccccCcCcccCCCCCCCceEeEeeceeeeeecCCCCCCceEE
Q psy2902 688 NGKDLRYNLEITLEQAAYGFNTSIRVPSWDICKSCYGNGAKKGTSPISCFTCSGQGQVRMQQGFFSIQQTCPKCQGAGKV 767 (945)
Q Consensus 688 ~g~~~~~~l~~~~~~~~~g~~~~~~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~~~~~C~~C~G~g~~ 767 (945)
.|.|+++++.+++.++.+|++..+...
T Consensus 5 ~G~DL~~~~~Isl~eAllG~~i~v~tl----------------------------------------------------- 31 (121)
T 1xao_A 5 DGDDLVYEAEIDLLTAIAGGEFALEHV----------------------------------------------------- 31 (121)
T ss_dssp ETTEEEEEEEEEHHHHHHCEEEEEECT-----------------------------------------------------
T ss_pred ECCeEEEEEEcCHHHHhCCCEEEEecC-----------------------------------------------------
Confidence 468999999999999999998877521
Q ss_pred eecCCcccCCCceEeeeeeEEEEeecC--CCCCeEEEEcCCCCCCCCCCCCccEEEEEEEecCCc--ccccCCCcee
Q psy2902 768 IPHPCLDCNGIGRIKRNKTLEVKIPAG--IENNMRIRSTGNGEPGLNGGSNGNLYIEIHIKPHKV--FERDGDDLHY 840 (945)
Q Consensus 768 ~~~~c~~c~G~g~~~~~~~l~v~ip~G--~~~g~~i~~~g~G~~~~~~~~~Gdl~i~i~v~~~~~--~~r~g~dl~~ 840 (945)
..+.+.|+||+| +++|++++++|+|||..+++.+|||||+|+|..|.. ++.++.+++.
T Consensus 32 ---------------dG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~~~~ls~~q~~~l~ 93 (121)
T 1xao_A 32 ---------------SGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPENHFTSEENLKKLE 93 (121)
T ss_dssp ---------------TSCEEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCCTTCSCHHHHHHHH
T ss_pred ---------------CCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHH
Confidence 123588999999 999999999999999765447899999999999988 8777755543
No 60
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.78 E-value=2.2e-07 Score=98.38 Aligned_cols=72 Identities=17% Similarity=0.214 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHhCCCCCCCCCCCchhhhhHHHhhhhc
Q psy2902 377 LLVDELITRTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRDINPDEAVAVGAAIQGSVL 452 (945)
Q Consensus 377 ~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~~~~~~~p~~avA~GAa~~a~~~ 452 (945)
+++..+++.+...+.+.++..+. .+.|+++||.+++|.|++.+++.++.++..+.+++.+.|+|||++|...
T Consensus 186 di~~av~e~Va~~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 186 DIIAGIHRSVASRVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHHCSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHHCCCeEeCCCcchHhHHHHHHHHHHh
Confidence 34444444444444455544322 3689999999999999999999999998888888889999999999753
No 61
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=98.73 E-value=2e-08 Score=116.12 Aligned_cols=211 Identities=15% Similarity=0.146 Sum_probs=117.4
Q ss_pred HHHHHHcCC---ccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEe-cCCCC--C
Q psy2902 224 KDAGRIAGL---EVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLST-NGDTF--L 297 (945)
Q Consensus 224 ~~Aa~~AGl---~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~-~~~~~--l 297 (945)
.++|+..|| +++....+..||+++.+.... +. +++-+|.+++-..+..-........+..... ..+.. .
T Consensus 214 ~~~a~~~Gl~g~pV~~g~~D~~aa~~g~g~~~~---g~--~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 288 (484)
T 2itm_A 214 PEVAKAWGMATVPVVAGGGDNAAGAVGVGMVDA---NQ--AMLSLGTSGVYFAVSEGFLSKPESAVHSFCHALPQRWHLM 288 (484)
T ss_dssp HHHHHHHTSCCCEEECCEEHHHHHHHHHTCCST---TC--EEEEESSSEEEEEECSSCCCCCSSSCEEEECSSTTCEEEE
T ss_pred HHHHHHhCCCCCeEEEEchHHHHHHHhCCCCCC---Cc--EEEEccchheeEEecCCCccCcccceEEeecccCCeeeee
Confidence 356666665 566677899999998876542 33 2333444333222211000111111111111 11111 1
Q ss_pred chHHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeeccCC---------CCeEEEE
Q psy2902 298 GGEDFDQRIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSNG---------APVHLNL 368 (945)
Q Consensus 298 GG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~---------~~~~~~~ 368 (945)
|+...-...++|+++.+.. . + +..+.+.+++ ........+.+|++..... ...+++.
T Consensus 289 ~~~~~~G~~~~W~~~~~~~----~---~---~~~~~~~a~~----~~~~~~gl~~lP~~~G~r~P~~~~~a~g~~~Gl~~ 354 (484)
T 2itm_A 289 SVMLSAASCLDWAAKLTGL----S---N---VPALIAAAQQ----ADESAEPVWFLPYLSGERTPHNNPQAKGVFFGLTH 354 (484)
T ss_dssp EEECCHHHHHHHHHHHTTC----C---S---HHHHHHHGGG----CCTTSCCCEEEEEEC--------CCEEEEEEEEET
T ss_pred ehhhhHHHHHHHHHHhcCc----c---c---HHHHHHHHhc----CCCCCCCeEEeCCCCCCCCCCCCCCCceEEEcCCC
Confidence 2332334456777776531 0 1 2223332221 1234455677776642211 1123344
Q ss_pred EEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHhCCCCCCCCCCCchhhhhHHHh
Q psy2902 369 KITRAKLELLVDELITRTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRDINPDEAVAVGAAIQ 448 (945)
Q Consensus 369 ~itr~~~e~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~~~~~~~p~~avA~GAa~~ 448 (945)
..++.++-+.+-+.+..-...+.+.|++.+. .++.|.++||+++++.|.+++++.+|.++.....++.+.|+|||+.
T Consensus 355 ~~~~~~~~rAvlEgia~~~~~~~~~l~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~~alGAA~l 431 (484)
T 2itm_A 355 QHGPNELARAVLEGVGYALADGMDVVHACGI---KPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARL 431 (484)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHHHTTTC---CCSCEEEESGGGCCHHHHHHHHHHHCCCEEEESCTTSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHcCC---CcceEEEEeccccCHHHHHHHHHHhCCeEEeCCCCCcccHHHHHHH
Confidence 5678888776666555555555556665443 4688999999999999999999999999986655555689999999
Q ss_pred hhhccCCC
Q psy2902 449 GSVLSGDR 456 (945)
Q Consensus 449 a~~~~~~~ 456 (945)
|+...|..
T Consensus 432 A~~~~g~~ 439 (484)
T 2itm_A 432 AQIAANPE 439 (484)
T ss_dssp HHHHHCTT
T ss_pred HHHHcCCc
Confidence 98877643
No 62
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=98.72 E-value=2e-07 Score=109.08 Aligned_cols=205 Identities=11% Similarity=0.081 Sum_probs=112.0
Q ss_pred HHHHHHcCC----ccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEec--CCCCC
Q psy2902 224 KDAGRIAGL----EVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTN--GDTFL 297 (945)
Q Consensus 224 ~~Aa~~AGl----~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~--~~~~l 297 (945)
.++|+..|| +++....+..||+++.+. ..+. +++-+|.+++-..+..-........ ..... ++..+
T Consensus 262 ~~~a~~~Gl~~g~pV~~g~~D~~aa~~g~~~----~~g~--~~~s~GTs~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 333 (538)
T 4bc3_A 262 SYYVQRYGFPPGCKVVAFTGDNPASLAGMRL----EEGD--IAVSLGTSDTLFLWLQEPMPALEGH--IFCNPVDSQHYM 333 (538)
T ss_dssp HHHHHHHCCCTTCEEECCEEHHHHHHHHTTC----CTTC--EEEEESSSEEEEEEESSCCCCSSSE--EEEETTEEEEEE
T ss_pred HHHHHHhCCCCCCeEEEecccHHhhhhcccc----CCCc--EEEEeccchheEEecCCCCCCCCcc--eEEeecCCCCEE
Confidence 466777777 456677888898888742 2333 3345676655544432111111111 11110 00000
Q ss_pred --chHHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeeccCCCCe---E-------
Q psy2902 298 --GGEDFDQRIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSNGAPV---H------- 365 (945)
Q Consensus 298 --GG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~~~~~---~------- 365 (945)
|+..--..+.+|+.+.+.. . .+..|.+.++++ .......+.+|++.... .+. .
T Consensus 334 ~~~~~~~gg~~~~w~~~~~~~-------~---~~~~l~~~a~~~----~~g~~gl~~lp~~~Ger-~P~~~G~~~~~~~~ 398 (538)
T 4bc3_A 334 ALLCFKNGSLMREKIRNESVS-------R---SWSDFSKALQST----EMGNGGNLGFYFDVMEI-TPEIIGRHRFNTEN 398 (538)
T ss_dssp EEEEESSSHHHHHHHHHHHST-------T---CHHHHHHHHHTS----CTTGGGCEEEEESSCCS-SSCCCEEEEECTTS
T ss_pred EeehhhccchHHHHHHHHhcC-------C---CHHHHHHHHhcC----CCCCCCeEEeecCCCCc-CCCCCceeeecccc
Confidence 1111112345777776631 1 133344444333 23344455666643211 110 0
Q ss_pred EEEE-EcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHhCCCCCCCCCCCchhhhh
Q psy2902 366 LNLK-ITRAKLELLVDELITRTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRDINPDEAVAVG 444 (945)
Q Consensus 366 ~~~~-itr~~~e~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~~~~~~~p~~avA~G 444 (945)
..++ .++.+|-+.+-+.+.... ...++..+.....++.|.++||++++++|.+++++.||.++... .+.++.|+|
T Consensus 399 ~g~~~~~~~~l~RAvlEgia~~~---r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alG 474 (538)
T 4bc3_A 399 HKVAAFPGDVEVRALIEGQFMAK---RIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVI-DTANSACVG 474 (538)
T ss_dssp CEESCCCHHHHHHHHHHHHHHHH---HHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTSCEEEC-CCTTHHHHH
T ss_pred ccccCCCHHHHHHHHHHHHHHHH---HHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCCceEec-CCCCchHHH
Confidence 0111 467776665555444333 33444433333457899999999999999999999999998754 457899999
Q ss_pred HHHhhhhccCC
Q psy2902 445 AAIQGSVLSGD 455 (945)
Q Consensus 445 Aa~~a~~~~~~ 455 (945)
||+.|+...|.
T Consensus 475 aA~lA~~a~G~ 485 (538)
T 4bc3_A 475 SAYRAFHGLAG 485 (538)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHhCc
Confidence 99999876653
No 63
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=98.62 E-value=2.6e-08 Score=115.71 Aligned_cols=202 Identities=16% Similarity=0.177 Sum_probs=115.1
Q ss_pred CccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEE-EeecCCceEEEEEecC-C-----CCCchHHHHH
Q psy2902 232 LEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEI-ADVDGEKQFEVLSTNG-D-----TFLGGEDFDQ 304 (945)
Q Consensus 232 l~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~-~~~~~~~~~~vl~~~~-~-----~~lGG~~iD~ 304 (945)
++++....+..||+++.+... .+ .+++-+|.+++-..+..- ......+.+...+..- + ...|+...-.
T Consensus 237 ~pV~~g~~D~~aa~~g~g~~~---~g--~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G 311 (504)
T 2d4w_A 237 VPIAGILGDQQAATFGQACFE---VG--QAKNTYGTGNFLLLNTGTEKVMSKNGLLTTVCYKIGDAPAVYALEGSIAVTG 311 (504)
T ss_dssp CEEEEEEEHHHHHHHHTTCCS---TT--EEEEEESSSEEEEEECTTSCCCCSSSCEEEEEECCTTSCCEEEEEEEESCSH
T ss_pred CeEEEECCcHHHHHhhCCCCC---CC--cEEEEcchhheeeeecCCccccCCCCcEEEEEEEcCCCCceEEEcchhhhHH
Confidence 556666778889999887543 12 244456666554443310 0011123333332211 1 0112222233
Q ss_pred HHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeeccC---------CCCeEEEEEEcHHHH
Q psy2902 305 RIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSN---------GAPVHLNLKITRAKL 375 (945)
Q Consensus 305 ~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~---------~~~~~~~~~itr~~~ 375 (945)
..++|+++.+.... + +..|.+.++++ . .....+.+|++.... +...+++...++.++
T Consensus 312 ~~~~W~~~~~~~~~--~-------~~~l~~~a~~~----~-~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l 377 (504)
T 2d4w_A 312 SLVQWLRDNLGMFE--D-------APDVEWLAGKV----Q-DNGGAYFVPAFSGLFAPYWRPDARGALVGLTRYVNRNHI 377 (504)
T ss_dssp HHHHHHHHTTCTTT--T-------CSCTHHHHTTS----S-SCTTCEEECTTCCCSTTTCCCCSCEEEEEECSSCCHHHH
T ss_pred HHHHHHHHHhCCCC--C-------HHHHHHHHhhC----C-CCCCEEEecCCCCCCCCCCCCCCCEEEEeCCCCCCHHHH
Confidence 46778877653210 0 11122222221 1 223345566653111 112234455688888
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-cCCCCCCCCcEEEecCccccHHHHHHHHHHhCCCCCCCCCCCchhhhhHHHhhhhccC
Q psy2902 376 ELLVDELITRTIEPCRIAIKD-AGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRDINPDEAVAVGAAIQGSVLSG 454 (945)
Q Consensus 376 e~~~~~~i~~i~~~i~~~l~~-~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~~~~~~~p~~avA~GAa~~a~~~~~ 454 (945)
-+.+-+.+......+.+.|++ .+.. ++.|.++||+++++.|.+++++.+|.++... .+.++.|+|||+.|+...|
T Consensus 378 ~rAvlEgia~~~~~~~~~l~~~~g~~---~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~lA~~~~G 453 (504)
T 2d4w_A 378 ARAALEATAFQSREVVDAMNADSGVD---LTELRVDGGMVANELLMQFQADQLGVDVVRP-KVAETTALGAAYAAGIAVG 453 (504)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCC---CCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC---cceEEEeCCcccCHHHHHHHHHHhCCeEEeC-CCCcchHHHHHHHHHhhcC
Confidence 877666665555555556654 4543 5789999999999999999999999998754 4577999999999988776
Q ss_pred CC
Q psy2902 455 DR 456 (945)
Q Consensus 455 ~~ 456 (945)
..
T Consensus 454 ~~ 455 (504)
T 2d4w_A 454 FW 455 (504)
T ss_dssp SS
T ss_pred cc
Confidence 43
No 64
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=98.61 E-value=5.3e-08 Score=113.13 Aligned_cols=203 Identities=13% Similarity=0.114 Sum_probs=116.9
Q ss_pred CCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEE-EeecCCceEEEEEecC-C-----C-CCchHHH
Q psy2902 231 GLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEI-ADVDGEKQFEVLSTNG-D-----T-FLGGEDF 302 (945)
Q Consensus 231 Gl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~-~~~~~~~~~~vl~~~~-~-----~-~lGG~~i 302 (945)
|++++....+..||+++.+... .+. +++-+|.+++-..+..- ......+.+...+..- + . ..|+...
T Consensus 239 g~pV~~g~~D~~aa~~g~g~~~---~g~--~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~ 313 (503)
T 2w40_A 239 NIPITGCIGDQQSACIGQAIFD---EGE--AKCTYGTGVFLLINTGEKVVYSTCGLITTICYKFNDNDKPKYALEGSIGT 313 (503)
T ss_dssp TCEEEEEEEHHHHHHHHTTCCS---TTC--EEEEESSSEEEEEECTTSCCCCSSSCEEEEEECCSTTSCCEEEEEEEESC
T ss_pred CceEEEECchHHHHHHhCCCCC---CCc--EEEEechhheeeeecCCccccCCCCceeEEEeecCCCCCceEEEechhhh
Confidence 7888888889999999887543 233 33446666544433310 0011122333222221 1 0 1122222
Q ss_pred HHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeeccC---------CCCeEEEEEEcHH
Q psy2902 303 DQRIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSN---------GAPVHLNLKITRA 373 (945)
Q Consensus 303 D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~---------~~~~~~~~~itr~ 373 (945)
-...++|+++ +... .+ +..|.+.++++ . .....+.+|++.... +...+++...++.
T Consensus 314 ~g~~~~w~~~-~~~~------~~---~~~l~~~a~~~----~-~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~ 378 (503)
T 2w40_A 314 AGSGVSWLLK-NKLI------DD---PSEASDIMEKC----E-NTTGVIFVPAFSGLYAPRWRSDARASIYGMTFNTERS 378 (503)
T ss_dssp SHHHHHHHHH-TTSS------SC---GGGHHHHHHHC----C-SCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHH
T ss_pred hHhHHHHHHH-hCCc------CC---HHHHHHHHhhC----C-CCCCEEEecCCCCCCCCCCCCCCcEEEECCCCCCCHH
Confidence 2345678777 6411 01 12233333332 2 233445666653111 1112334455788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-cCCCCCCC-CcEEEecCccccHHHHHHHHHHhCCCCCCCCCCCchhhhhHHHhhhh
Q psy2902 374 KLELLVDELITRTIEPCRIAIKD-AGIKVSDI-NDIILVGGMTRMPKVQEKVKEFFGKDPRRDINPDEAVAVGAAIQGSV 451 (945)
Q Consensus 374 ~~e~~~~~~i~~i~~~i~~~l~~-~~~~~~~i-~~ViLvGG~s~~p~v~~~l~~~fg~~~~~~~~p~~avA~GAa~~a~~ 451 (945)
++-+.+-+.+..-...+.+.|++ .+. .+ +.|.++||+++++.|.+++++.+|.++... .+.++.|+|||+.|+.
T Consensus 379 ~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~~-~~~e~~alGaA~la~~ 454 (503)
T 2w40_A 379 HIVRALLEGIAFQLNEIVDSLTSDMGI---EMLHVLRCDGGMTKNKPFMQFNSDIINTKIEVS-KYKEVTSLGAAVLAGL 454 (503)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTC---SCCSCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC---CccceEEEeCccccCHHHHHHHHHHHCCeEEec-CCCcchHHHHHHHHHH
Confidence 88876666655555555556654 443 35 789999999999999999999999998754 4567999999999988
Q ss_pred ccCCCC
Q psy2902 452 LSGDRK 457 (945)
Q Consensus 452 ~~~~~~ 457 (945)
..|..+
T Consensus 455 ~~G~~~ 460 (503)
T 2w40_A 455 EVKIWD 460 (503)
T ss_dssp HTTCSS
T ss_pred HhCccC
Confidence 776433
No 65
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=98.58 E-value=6.5e-08 Score=112.15 Aligned_cols=202 Identities=16% Similarity=0.193 Sum_probs=113.4
Q ss_pred cCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEE-EeecCCceEEEEEec-CC----CCCchHHHH
Q psy2902 230 AGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEI-ADVDGEKQFEVLSTN-GD----TFLGGEDFD 303 (945)
Q Consensus 230 AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~-~~~~~~~~~~vl~~~-~~----~~lGG~~iD 303 (945)
.|++++....+..||+++.+... .+. +++-+|.+++-..+..- ......+.+...+.. .+ ...|+...-
T Consensus 232 ~g~pV~~g~~D~~aa~~g~g~~~---~g~--~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 306 (495)
T 2dpn_A 232 APVPIRGVLGDQQAALFGQAALG---GGE--GKCTYGTGAFLLLNTGKRPVLSEKGLLATVAWSLGGRATYALEGSLFVA 306 (495)
T ss_dssp SCCBEEEEEEHHHHHHHHTTCCS---TTC--EEEEESSSEEEEEECTTSCCCCSSSCEEEEEEEETTEEEEEEEEEESCS
T ss_pred CCCeEEEECcHHHHHHHhCCCCC---CCc--EEEEccHhhhhhhhcCCccccCCCCceEEEEEEcCCCCEEEEechHHhH
Confidence 67888888889999999887543 233 33446665444333210 001111222222111 00 111232223
Q ss_pred HHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeeccC---------CCCeEEEEEEcHHH
Q psy2902 304 QRIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSN---------GAPVHLNLKITRAK 374 (945)
Q Consensus 304 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~---------~~~~~~~~~itr~~ 374 (945)
...++|+++ +... .+ +..|.+.++++ . .....+.+|++.... +...+++...++.+
T Consensus 307 g~~~~w~~~-~~~~------~~---~~~l~~~a~~~----~-~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~ 371 (495)
T 2dpn_A 307 GAAVGWLKE-VGLI------RE---SAEVEALAASV----E-DTGDVYFVPAFTGLGAPYWDPYARGTLLGLTRGTSRAH 371 (495)
T ss_dssp HHHHHHHHH-TTSS------SS---TTTHHHHHHTC----S-CCSSCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHH
T ss_pred HHHHHHHHH-cCCc------cC---HHHHHHHHhhC----C-CCCcEEEecCCCCCCCCCCCCCCceEEEecCCCCCHHH
Confidence 345678777 5311 01 11233333322 2 233345666653111 11123344557888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-cCCCCCCCCcEEEecCccccHHHHHHHHHHhCCCCCCCCCCCchhhhhHHHhhhhcc
Q psy2902 375 LELLVDELITRTIEPCRIAIKD-AGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRDINPDEAVAVGAAIQGSVLS 453 (945)
Q Consensus 375 ~e~~~~~~i~~i~~~i~~~l~~-~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~~~~~~~p~~avA~GAa~~a~~~~ 453 (945)
+-+.+-+.+......+.+.|++ .+. .++.|+++||+|+++.|.+++++.+|.++... .+.++.|+|||+.|+...
T Consensus 372 ~~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~n~~~~q~~Adv~g~pV~~~-~~~e~~alGaA~la~~a~ 447 (495)
T 2dpn_A 372 LARAALEGVAFQVRDVVLAMEEEAGV---RLKVLKADGGMAQNRLFLKIQADLLGVPVAVP-EVTETTALGAALMAGVGA 447 (495)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSC---CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecccccCHHHHHHHHHHhCCeeEec-CCcccHHHHHHHHHHhhc
Confidence 7766555555444444455543 333 36789999999999999999999999998754 456799999999998776
Q ss_pred CC
Q psy2902 454 GD 455 (945)
Q Consensus 454 ~~ 455 (945)
|.
T Consensus 448 G~ 449 (495)
T 2dpn_A 448 GA 449 (495)
T ss_dssp TS
T ss_pred Cc
Confidence 63
No 66
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.58 E-value=2.6e-08 Score=88.50 Aligned_cols=76 Identities=21% Similarity=0.474 Sum_probs=54.0
Q ss_pred CCccceeeccccccccccceeeEeecc-------------ccccCCCCCccccccC-----cCcccCCCCCCCceEeEee
Q psy2902 688 NGKDLRYNLEITLEQAAYGFNTSIRVP-------------SWDICKSCYGNGAKKG-----TSPISCFTCSGQGQVRMQQ 749 (945)
Q Consensus 688 ~g~~~~~~l~~~~~~~~~g~~~~~~~~-------------~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~ 749 (945)
...++.++|++.|.+.....+...... ...+|+.|+|+|.... ...++|+.|+|+|++
T Consensus 4 ~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~---- 79 (104)
T 2ctt_A 4 GSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSI---- 79 (104)
T ss_dssp CCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEE----
T ss_pred eEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceE----
Confidence 344555555555555555444444433 3478999999997642 246799999999998
Q ss_pred ceeeeeecCCCCCCceEEeecC
Q psy2902 750 GFFSIQQTCPKCQGAGKVIPHP 771 (945)
Q Consensus 750 ~~~~~~~~C~~C~G~g~~~~~~ 771 (945)
+.++|+.|+|.|++....
T Consensus 80 ----i~~~C~~C~G~G~v~~~k 97 (104)
T 2ctt_A 80 ----IISPCVVCRGAGQAKQKK 97 (104)
T ss_dssp ----CSSCCSSSSSCSEECCCC
T ss_pred ----CCCcCCCCCCeeEEEEEE
Confidence 789999999999986543
No 67
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=98.49 E-value=9.9e-08 Score=93.82 Aligned_cols=73 Identities=23% Similarity=0.321 Sum_probs=59.8
Q ss_pred EeecCCcccCCCceEee--------------------eeeEEEEeecCCCCCeEEEEcCCCCCCCCC-CCCccEEEEEEE
Q psy2902 767 VIPHPCLDCNGIGRIKR--------------------NKTLEVKIPAGIENNMRIRSTGNGEPGLNG-GSNGNLYIEIHI 825 (945)
Q Consensus 767 ~~~~~c~~c~G~g~~~~--------------------~~~l~v~ip~G~~~g~~i~~~g~G~~~~~~-~~~Gdl~i~i~v 825 (945)
+.+|+.|+|+|.++..+ .+.+.|.+|+|+++|++++++|+|||..++ +.+|||||+|+|
T Consensus 82 ~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V 161 (180)
T 2q2g_A 82 TKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFDI 161 (180)
T ss_dssp ECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTCCEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEEE
T ss_pred EEecccEEEcCCEEEEEEEcCHHHHhCCCEEEeeCCCCCEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEEE
Confidence 46899999999655544 335688999999999999999999997643 568999999999
Q ss_pred ecCCcccccCCCce
Q psy2902 826 KPHKVFERDGDDLH 839 (945)
Q Consensus 826 ~~~~~~~r~g~dl~ 839 (945)
..|..++.++.+++
T Consensus 162 ~~P~~Ls~~q~~~l 175 (180)
T 2q2g_A 162 CFPKSLTPEQKKLI 175 (180)
T ss_dssp ECCSCCCHHHHHHH
T ss_pred ECCCCCCHHHHHHH
Confidence 99998877665543
No 68
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=98.29 E-value=9.6e-07 Score=85.90 Aligned_cols=79 Identities=13% Similarity=0.175 Sum_probs=64.4
Q ss_pred CceeEEeeCHHHHhcCCeEEEecC----CC-----eEEEEeCCCCCCCcEEEECCCCcCCCCCCCCccEEEEEEEECCCC
Q psy2902 837 DLHYEMPISFSTAALGGEIEAPTL----NG-----KAFFVIPEGTQSGKIFRLRGKGIKNIRSSIPGDLFCHVTIETPVQ 907 (945)
Q Consensus 837 dl~~~~~i~l~eal~G~~~~v~~l----~g-----~~~~~i~~~~~~g~~~~i~g~G~~~~~~~~~Gdl~v~~~i~~p~~ 907 (945)
|+.+++.|+|.||+.|++++|..- +| ...+.||+|+.+|+++|++|+|-+...++.+|||||++++..++.
T Consensus 2 d~~~~l~islee~~~G~~k~i~~~~~~~~G~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~ 81 (170)
T 1c3g_A 2 TVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPN 81 (170)
T ss_dssp EEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSS
T ss_pred CEEEEEEeEHHHhhCCcEEEEEEEEecCCCcEEeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCc
Confidence 788999999999999999887643 23 346779999999999999999987656677899999999998776
Q ss_pred CCHHHHHH
Q psy2902 908 LTEYQKKL 915 (945)
Q Consensus 908 l~~~~~~~ 915 (945)
+.-+..++
T Consensus 82 F~R~G~DL 89 (170)
T 1c3g_A 82 FKRDGDDL 89 (170)
T ss_dssp EEEETTEE
T ss_pred cEEeCCcE
Confidence 65444333
No 69
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=98.19 E-value=5.1e-07 Score=75.83 Aligned_cols=69 Identities=23% Similarity=0.459 Sum_probs=52.6
Q ss_pred ceeeccccccccccceeeEeeccccccCCCCCccccccC-----cCcccCCCCCCCceEeEeeceeeeeecCCCCCCceE
Q psy2902 692 LRYNLEITLEQAAYGFNTSIRVPSWDICKSCYGNGAKKG-----TSPISCFTCSGQGQVRMQQGFFSIQQTCPKCQGAGK 766 (945)
Q Consensus 692 ~~~~l~~~~~~~~~g~~~~~~~~~~~~C~~C~G~G~~~~-----~~~~~C~~C~G~G~~~~~~~~~~~~~~C~~C~G~g~ 766 (945)
..+.++....+..+.++.........+|+.|+|+|.... ....+|+.|+|+|.+ +.++|+.|+|.|+
T Consensus 4 ~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~--------~~~~C~~C~G~G~ 75 (79)
T 1exk_A 4 KEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTL--------IKDPCNKCHGHGR 75 (79)
T ss_dssp TSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEE--------CSSBCGGGTTSSE
T ss_pred EEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEE--------CCCcCCCCCCeEE
Confidence 344555556666777666655555679999999998653 135699999999998 6889999999998
Q ss_pred Ee
Q psy2902 767 VI 768 (945)
Q Consensus 767 ~~ 768 (945)
+.
T Consensus 76 ~~ 77 (79)
T 1exk_A 76 VE 77 (79)
T ss_dssp EE
T ss_pred Ee
Confidence 74
No 70
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=98.14 E-value=6.8e-07 Score=79.21 Aligned_cols=89 Identities=42% Similarity=0.679 Sum_probs=50.6
Q ss_pred CCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhccccCCCCCCCCCc
Q psy2902 576 GLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYGHAGIDPNMSGSSA 655 (945)
Q Consensus 576 ~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~~~g~~~~~~g~~~ 655 (945)
..|.++|.+..+++....++|+... . ..+.+.+..+++||++|+++.+|+.||.+++.++.++..++++
T Consensus 14 ~as~~eIk~ayr~l~~~~HPDk~~~---------~--~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~~~~~~~ 82 (103)
T 1bq0_A 14 TAEEREIRKAYKRLAMKYHPDRNQG---------D--KEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGG 82 (103)
T ss_dssp SCCHHHHHHHHHHHHTTTCTTTCTT---------T--CTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCSCC-----
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCC---------c--HHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcccCcCCCC
Confidence 4678999999999999888887321 1 1123567888999999999999999999999887754322211
Q ss_pred ccccccccccccccccccCC
Q psy2902 656 SAEASNFADAFGDIFGDIFG 675 (945)
Q Consensus 656 ~~~~~~f~d~f~~~F~~~~g 675 (945)
..++.+|.++|+++|+++|+
T Consensus 83 ~~~~~~~~~~f~~~f~~~f~ 102 (103)
T 1bq0_A 83 FGGGADFSDIFGDVFGDIFG 102 (103)
T ss_dssp --------------------
T ss_pred CCCCCCHHHHHHHHHHhhcC
Confidence 11122456778778877664
No 71
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=98.04 E-value=1.3e-05 Score=94.35 Aligned_cols=217 Identities=14% Similarity=0.158 Sum_probs=121.4
Q ss_pred HHHHHHcCC----ccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEe---cCCC-
Q psy2902 224 KDAGRIAGL----EVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLST---NGDT- 295 (945)
Q Consensus 224 ~~Aa~~AGl----~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~---~~~~- 295 (945)
.++|+..|| +++....+..||+++.+... ...+++-+|.+++-..+..-... .....-.+.. .+..
T Consensus 254 ~~~A~~~GL~~g~pV~~g~~D~~aa~~g~g~~~-----~g~~~~~~GTs~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~ 327 (572)
T 3jvp_A 254 PEMAEKMGLNPGIAVAVGNVDAHAAVPAVGVTT-----PGKLVMAMGTSICHMLLGEKEQE-VEGMCGVVEDGIIPGYLG 327 (572)
T ss_dssp HHHHHHHTSCTTCEEECCEETTTTHHHHTTCCS-----SEEEEEEESSSEEEEEEESSCCC-CTTCSEEEETSSSTTSEE
T ss_pred HHHHHHhCCCCCCeEEEeCchHHHHHhhCCCCC-----CCcEEEEecchhheeeecCCCcc-CCCceeeccCccCCCcEE
Confidence 456666665 34556678888888876543 12344456666544433321000 1111101110 0000
Q ss_pred CCchHHHHHHHHHHHHHHHHHHhC-CCC-ccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeeccC---------CCCe
Q psy2902 296 FLGGEDFDQRIIDYILDEFNKING-IDL-RKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSN---------GAPV 364 (945)
Q Consensus 296 ~lGG~~iD~~l~~~l~~~~~~~~~-~~~-~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~~---------~~~~ 364 (945)
..|+..-....++|+++.|..... ... ......+..|.+.++++ .......+.+|++.... +...
T Consensus 328 ~~g~~~~~G~~~~W~~~~~~~~~~~~~~~~~g~~~~~~l~~~a~~~----~~g~~gl~~lP~~~Ger~P~~d~~arg~~~ 403 (572)
T 3jvp_A 328 YEAGQSAVGDIFAWFVKHGVSAATFDEAQEKGVNVHALLEEKASQL----RPGESGLLALDWWNGNRSILVDTELSGMLL 403 (572)
T ss_dssp EEEEESCSHHHHHHHHHHTSBHHHHHHHHHTTBCHHHHHHHHHTSS----CTTSSCCEEECCTTCCCTTTCCSSCCEEEE
T ss_pred EeehhhhHHHHHHHHHHhccchhhHHHHHhcCCCHHHHHHHHHHhC----CCCCCCeEeCCccCCCCCCCCCCCcCEEEE
Confidence 012222233456777776631000 000 00000133344333322 23344556777654221 1123
Q ss_pred EEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCcEEEecCcc-ccHHHHHHHHHHhCCCCCCCCCCCchhhh
Q psy2902 365 HLNLKITRAKLELLVDELITRTIEPCRIAIKDAGIKVSDINDIILVGGMT-RMPKVQEKVKEFFGKDPRRDINPDEAVAV 443 (945)
Q Consensus 365 ~~~~~itr~~~e~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-~~p~v~~~l~~~fg~~~~~~~~p~~avA~ 443 (945)
+++...++.+|-+.+-+.+......+.+.|++.+. .++.|.++||++ ++++|.|++++.||.++.+. .+.++.|+
T Consensus 404 Gl~~~~t~~~l~RAvlEgia~~~r~~~~~l~~~g~---~~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~~-~~~e~~al 479 (572)
T 3jvp_A 404 GYTLQTKPEEIYRALLEATAFGTRAIVDAFHGRGV---EVHELYACGGLPQKNHLLMQIFADVTNREIKVA-ASKQTPAL 479 (572)
T ss_dssp EECTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTTC---CEEEEEEESSHHHHCHHHHHHHHHHHTSCEEEB-CCSSHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCC---CcCEEEEEcCchhhCHHHHHHHHHHHCCeeEec-CCCccHHH
Confidence 44455689998887777776666666677776544 468999999999 99999999999999998644 46789999
Q ss_pred hHHHhhhhccC
Q psy2902 444 GAAIQGSVLSG 454 (945)
Q Consensus 444 GAa~~a~~~~~ 454 (945)
|||+.|+...|
T Consensus 480 GaA~lA~~a~G 490 (572)
T 3jvp_A 480 GAAMFASVAAG 490 (572)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHhcC
Confidence 99999998776
No 72
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=98.01 E-value=0.0003 Score=74.01 Aligned_cols=75 Identities=13% Similarity=0.142 Sum_probs=52.5
Q ss_pred EcHHHHHH-HHHHHHHHHHHHHHHHHHHcCCCCCCCCcEEEecC-ccccHHHHHHHHHHh---CCCCCCCCCCCchhhhh
Q psy2902 370 ITRAKLEL-LVDELITRTIEPCRIAIKDAGIKVSDINDIILVGG-MTRMPKVQEKVKEFF---GKDPRRDINPDEAVAVG 444 (945)
Q Consensus 370 itr~~~e~-~~~~~i~~i~~~i~~~l~~~~~~~~~i~~ViLvGG-~s~~p~v~~~l~~~f---g~~~~~~~~p~~avA~G 444 (945)
.+++++-. ++..+.+++..+.....+..+ ++.|+++|| .+..|.+++.+++.+ +.++..+.+|..+.|+|
T Consensus 207 ~~~eDIaasl~~sV~~~I~~la~~~a~~~~-----i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlG 281 (287)
T 2ews_A 207 FTPSNKLAAVIGVVGEVVTTMAITVAREFK-----TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIG 281 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHH
Confidence 35555543 333343444333333333433 457999999 899999999999974 67777788999999999
Q ss_pred HHHhh
Q psy2902 445 AAIQG 449 (945)
Q Consensus 445 Aa~~a 449 (945)
||+.+
T Consensus 282 AaL~~ 286 (287)
T 2ews_A 282 ALYLE 286 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99875
No 73
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=97.96 E-value=4.5e-05 Score=87.66 Aligned_cols=154 Identities=14% Similarity=0.173 Sum_probs=100.8
Q ss_pred CcEEEEcCCCCCHHHHHHHHHHH-HHcCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCC
Q psy2902 205 TEAVITVPAYFNDAQRQATKDAG-RIAGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGE 283 (945)
Q Consensus 205 ~~~VitVPa~~~~~qr~~l~~Aa-~~AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~ 283 (945)
..++||.|..++...|+.|.+++ +.+|++.+.++.+|.||+++++. ..+-||+|+|+|+|+++.+.-+..-..
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl------~ttGLVVDiG~g~T~VvPV~eG~vl~~ 295 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI------STSTCVVNIGAAETRIACVDEGTVLEH 295 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC------SSCEEEEEECSSCEEEEEEETTEECGG
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC------CCceEEEcCCCceEEEEEEeCCEEEhh
Confidence 46899999999999999998887 56899999999999999998864 235799999999999999853111111
Q ss_pred ceEEEEEecCCCCCchHHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeee--eceee-c-c
Q psy2902 284 KQFEVLSTNGDTFLGGEDFDQRIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEIN--EPYIA-M-S 359 (945)
Q Consensus 284 ~~~~vl~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~--i~~~~-~-~ 359 (945)
.. .-..+||.++|+.|.++|..+--......+.. . .=...++.+|+.++.-....+. ...+. . .
T Consensus 296 ai-------~rL~iGG~dLT~yL~kLL~~rgypy~~~~f~t--~---~e~eiVrdIKEk~CyVs~~Di~~q~~~f~~r~P 363 (655)
T 4am6_A 296 SA-------ITLDYGGDDITRLFALFLLQSDFPLQDWKIDS--K---HGWLLAERLKKNFTTFQDADVAVQLYNFMNRSP 363 (655)
T ss_dssp GC-------EEESCCHHHHHHHHHHHHHHTTCSCCSCCTTS--H---HHHHHHHHHHHHHCCCCGGGCCSEEEEEEECCS
T ss_pred he-------eeecchHHHHHHHHHHHHHHcCCCccccCCCC--c---chHHHHHHHHHheEEEcccchhhhhhcceeccC
Confidence 11 12467999999999999876521000011111 1 1145678899999877443332 11111 1 1
Q ss_pred CCCCeEEEEEEcHHHHH
Q psy2902 360 NGAPVHLNLKITRAKLE 376 (945)
Q Consensus 360 ~~~~~~~~~~itr~~~e 376 (945)
......+.+.+--+.|.
T Consensus 364 ~~~~~ky~i~vgdErfl 380 (655)
T 4am6_A 364 NQPTEKYEFKLFDEVML 380 (655)
T ss_dssp SSCEEEEEEEESSHHHH
T ss_pred CCCCcceEEEECCeehh
Confidence 11123566777666654
No 74
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=97.31 E-value=0.0001 Score=55.41 Aligned_cols=28 Identities=36% Similarity=0.977 Sum_probs=17.9
Q ss_pred cccCCCCCCCceEeEeeceeeeeecCCCCCCceEEe
Q psy2902 733 PISCFTCSGQGQVRMQQGFFSIQQTCPKCQGAGKVI 768 (945)
Q Consensus 733 ~~~C~~C~G~G~~~~~~~~~~~~~~C~~C~G~g~~~ 768 (945)
+++|+.|+|+|++ +.++|+.|+|+|.+.
T Consensus 9 ~~~C~~C~GsG~~--------i~~~C~~C~G~G~v~ 36 (53)
T 3lcz_A 9 ETTCPNCNGSGRE--------EPEPCPKCLGKGVIL 36 (53)
T ss_dssp EEECTTTTTSCEE--------TTEECTTTTTSSEEE
T ss_pred eccCcCCcccccC--------CCCcCCCCCCcEEEE
Confidence 4566666666666 556666666666653
No 75
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=96.97 E-value=0.00035 Score=52.51 Aligned_cols=25 Identities=32% Similarity=0.798 Sum_probs=11.8
Q ss_pred cCCCCCccccccCcCcccCCCCCCCceE
Q psy2902 718 ICKSCYGNGAKKGTSPISCFTCSGQGQV 745 (945)
Q Consensus 718 ~C~~C~G~G~~~~~~~~~C~~C~G~G~~ 745 (945)
+|+.|+|+|... ..+|+.|+|.|.+
T Consensus 11 ~C~~C~GsG~~~---~~~C~~C~G~G~v 35 (53)
T 2bx9_A 11 ACPKCERAGEIE---GTPCPACSGKGVI 35 (53)
T ss_dssp ECTTTTTSSEET---TEECTTTTTSSEE
T ss_pred cCCCCcceeccC---CCCCccCCCCccE
Confidence 455555555443 1345555554444
No 76
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=96.77 E-value=0.00045 Score=51.90 Aligned_cols=30 Identities=43% Similarity=1.067 Sum_probs=24.5
Q ss_pred eeecCCCCCCceEEeecCCcccCCCceEee
Q psy2902 754 IQQTCPKCQGAGKVIPHPCLDCNGIGRIKR 783 (945)
Q Consensus 754 ~~~~C~~C~G~g~~~~~~c~~c~G~g~~~~ 783 (945)
++.+|+.|+|.|.++.++|..|.|.|.+.+
T Consensus 8 ~~~~C~~C~GsG~~i~~~C~~C~G~G~v~~ 37 (53)
T 3lcz_A 8 LETTCPNCNGSGREEPEPCPKCLGKGVILT 37 (53)
T ss_dssp HEEECTTTTTSCEETTEECTTTTTSSEEEC
T ss_pred eeccCcCCcccccCCCCcCCCCCCcEEEEE
Confidence 577888888888888888888888887654
No 77
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=96.70 E-value=0.038 Score=59.64 Aligned_cols=46 Identities=26% Similarity=0.299 Sum_probs=31.8
Q ss_pred HcCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEE
Q psy2902 229 IAGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIE 276 (945)
Q Consensus 229 ~AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~ 276 (945)
..|++ +.+.++..|||++..........++++++-+|.| +-..++.
T Consensus 95 ~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~ 140 (321)
T 3vgl_A 95 RVGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGIII 140 (321)
T ss_dssp HHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEE
T ss_pred hhCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEEE
Confidence 34776 6899999999997644332234567888889988 5555553
No 78
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=96.64 E-value=0.48 Score=51.39 Aligned_cols=62 Identities=11% Similarity=-0.028 Sum_probs=41.9
Q ss_pred CCCcEEEEcCCCCCHHHHHHHHHHHHH-cC--CccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceE
Q psy2902 203 EITEAVITVPAYFNDAQRQATKDAGRI-AG--LEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFD 271 (945)
Q Consensus 203 ~~~~~VitVPa~~~~~qr~~l~~Aa~~-AG--l~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~d 271 (945)
.+..+.|++|...+......+.+..+. .+ .-.+.+.++..|||+++ . +...+++-+|.|.--
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~-~------~~~~v~v~~GTGig~ 134 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA-T------PDGGVVLISGTGSNC 134 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH-C------SSCEEEEEESSSEEE
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh-C------CCCcEEEEEcCCcee
Confidence 467789999998887655566555544 34 13468999999999984 2 134556667776543
No 79
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=96.63 E-value=0.0027 Score=72.60 Aligned_cols=98 Identities=10% Similarity=0.002 Sum_probs=62.0
Q ss_pred cceeeeeceeeccCCC---CeEEEEEEcHHHHHHHHHHHHHH--HHHHHHHHHHHcCCCCCCCCcEEEecCccccHHHHH
Q psy2902 347 KQTEINEPYIAMSNGA---PVHLNLKITRAKLELLVDELITR--TIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQE 421 (945)
Q Consensus 347 ~~~~i~i~~~~~~~~~---~~~~~~~itr~~~e~~~~~~i~~--i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~ 421 (945)
....+.+|++...... ....-+-++.+++.+ .+++. +.-.+...++.... .+.|.++||++++++|.|
T Consensus 333 ~~Gl~flP~l~Ger~P~~d~rG~~~Gl~~~~l~R---A~lE~~Gia~~~r~~l~~~~~----~~~i~~~GG~a~s~~w~Q 405 (482)
T 3h6e_A 333 RHGRMILPTLMRGFGPYPHGRFAWINRPEDWFER---RAAACLYAALVADTALDLIGS----TGRILVEGRFAEADVFVR 405 (482)
T ss_dssp HTTCEEESCSSTTCSSCTTCCCEEESCCSSHHHH---HHHHHHHHHHHHHHHHHHTTC----CSEEEEESGGGGCHHHHH
T ss_pred CCCeEEecCCCCCCCCCCCCceEEeCCCHHHHHH---HHHHHHhHHHHHHHHHHHhcC----CCeEEEeCCcccCHHHHH
Confidence 3456777776522110 012223344444444 44432 33333444444321 268999999999999999
Q ss_pred HHHHH-hCCCCCCCCCCCchhhhhHHHhhhhc
Q psy2902 422 KVKEF-FGKDPRRDINPDEAVAVGAAIQGSVL 452 (945)
Q Consensus 422 ~l~~~-fg~~~~~~~~p~~avA~GAa~~a~~~ 452 (945)
++++. ||.++.++. ..++.|+|||++|+..
T Consensus 406 i~ADv~~g~pV~~~~-~~e~~alGAA~lA~~a 436 (482)
T 3h6e_A 406 ALASLRPDCAVYTAN-AHNDVSFGALRLIDPG 436 (482)
T ss_dssp HHHHHSTTSEEEEES-SCCCTTGGGHHHHCTT
T ss_pred HHhhhcCCCeEEEcC-CCchHHHHHHHHhCcc
Confidence 99999 999997554 4678999999999865
No 80
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=96.53 E-value=0.6 Score=50.23 Aligned_cols=64 Identities=14% Similarity=0.159 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHh---CCCCCCCC---CCCchhhhhHHHhhhhcc
Q psy2902 385 RTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFF---GKDPRRDI---NPDEAVAVGAAIQGSVLS 453 (945)
Q Consensus 385 ~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f---g~~~~~~~---~p~~avA~GAa~~a~~~~ 453 (945)
.+.+.+.++.+..+ ++.|+|+||.+....+++.+.+.+ |.++..+. -.|.++++|+|.+.....
T Consensus 231 ~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~ 300 (330)
T 2ivn_A 231 ALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKA 300 (330)
T ss_dssp HHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHHhc
Confidence 33344444444433 468999999999999999999877 55554443 346788999887654433
No 81
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=96.53 E-value=0.00069 Score=50.89 Aligned_cols=29 Identities=28% Similarity=0.888 Sum_probs=25.2
Q ss_pred cccCCCCCCCceEeEeeceeeeeecCCCCCCceEEee
Q psy2902 733 PISCFTCSGQGQVRMQQGFFSIQQTCPKCQGAGKVIP 769 (945)
Q Consensus 733 ~~~C~~C~G~G~~~~~~~~~~~~~~C~~C~G~g~~~~ 769 (945)
..+|+.|+|+|.+ ...+|+.|+|.|.+..
T Consensus 9 ~~~C~~C~GsG~~--------~~~~C~~C~G~G~v~~ 37 (53)
T 2bx9_A 9 EVACPKCERAGEI--------EGTPCPACSGKGVILT 37 (53)
T ss_dssp EEECTTTTTSSEE--------TTEECTTTTTSSEEEC
T ss_pred cccCCCCcceecc--------CCCCCccCCCCccEEE
Confidence 5689999999998 5688999999998754
No 82
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=96.48 E-value=0.21 Score=52.96 Aligned_cols=47 Identities=23% Similarity=0.295 Sum_probs=34.8
Q ss_pred CCcEEEecCccccHHHHHHHHHHhCC-CCCCCCCCCchhhhhHHHhhhh
Q psy2902 404 INDIILVGGMTRMPKVQEKVKEFFGK-DPRRDINPDEAVAVGAAIQGSV 451 (945)
Q Consensus 404 i~~ViLvGG~s~~p~v~~~l~~~fg~-~~~~~~~p~~avA~GAa~~a~~ 451 (945)
.+.|+|.||.+..+.+.+.+++.+.. ++.... .+.+.+.|||.++..
T Consensus 240 p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 240 TNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp CSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 46899999998778888888777642 444344 557899999988754
No 83
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=96.28 E-value=0.0057 Score=70.45 Aligned_cols=81 Identities=12% Similarity=0.076 Sum_probs=62.9
Q ss_pred EEEcHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCCCCCCcEEEecCccccHHHHHHHHHHhCCCCCCCCCCCchhhhhHH
Q psy2902 368 LKITRAKLELLVDELITRTIEPCRIAIKD-AGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRDINPDEAVAVGAA 446 (945)
Q Consensus 368 ~~itr~~~e~~~~~~i~~i~~~i~~~l~~-~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~~~~~~~~p~~avA~GAa 446 (945)
...+|.+|-+.+-+.+......+.+.|++ .+.. ++.|.++||+|++++|.|++++.||.++.... .++.|+|||
T Consensus 360 ~~~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~~---~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~--~e~~alGaa 434 (489)
T 2uyt_A 360 IPESDAELARCIFDSLALLYADVLHELAQLRGED---FSQLHIVGGGCQNTLLNQLCADACGIRVIAGP--VEASTLGNI 434 (489)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC---CSEEEEESGGGGCHHHHHHHHHHHTSEEEECC--TTHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC---CCEEEEeCChhhhHHHHHHHHHHHCCeeecCC--ccHhHHHHH
Confidence 46689999887777776666666666665 4443 57899999999999999999999999987443 689999996
Q ss_pred Hhhhhcc
Q psy2902 447 IQGSVLS 453 (945)
Q Consensus 447 ~~a~~~~ 453 (945)
+.|....
T Consensus 435 ~~A~~a~ 441 (489)
T 2uyt_A 435 GIQLMTL 441 (489)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 6665433
No 84
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=96.24 E-value=0.012 Score=63.59 Aligned_cols=46 Identities=15% Similarity=0.049 Sum_probs=40.0
Q ss_pred CCcEEEecC-ccccHHHHHHHHHHhC------CCCCCCCCCCchhhhhHHHhh
Q psy2902 404 INDIILVGG-MTRMPKVQEKVKEFFG------KDPRRDINPDEAVAVGAAIQG 449 (945)
Q Consensus 404 i~~ViLvGG-~s~~p~v~~~l~~~fg------~~~~~~~~p~~avA~GAa~~a 449 (945)
++.|+++|| .+..|.+++.|+..++ .++..+.+|..+.|+|||+.+
T Consensus 306 i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 306 IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHH
T ss_pred CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHh
Confidence 457999999 8999999999999873 566668899999999999976
No 85
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=96.23 E-value=0.019 Score=61.47 Aligned_cols=78 Identities=18% Similarity=0.154 Sum_probs=51.1
Q ss_pred HHHHHHHHHHcCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEecCCCCCch
Q psy2902 220 RQATKDAGRIAGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGG 299 (945)
Q Consensus 220 r~~l~~Aa~~AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~~~lGG 299 (945)
.+.+..+-+.+|+++-.+-.|.+|...+.+...........+|+|+|||+|.+++.+- +.+.. .....+|+
T Consensus 100 ~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~------~~~~~---~~Sl~~G~ 170 (315)
T 1t6c_A 100 EEFLERVKREVGLVVEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGKG------YKVRE---VISLPIGI 170 (315)
T ss_dssp HHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEET------TEEEE---EEEECCCH
T ss_pred HHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEeC------Cceee---EEEEeccH
Confidence 3455555567899876666777776655544332223467999999999999999752 22211 22356799
Q ss_pred HHHHHHH
Q psy2902 300 EDFDQRI 306 (945)
Q Consensus 300 ~~iD~~l 306 (945)
..+.+.+
T Consensus 171 v~l~e~~ 177 (315)
T 1t6c_A 171 VNLTETF 177 (315)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8888775
No 86
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=96.22 E-value=0.17 Score=54.39 Aligned_cols=44 Identities=23% Similarity=0.400 Sum_probs=30.0
Q ss_pred cCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEE
Q psy2902 230 AGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSII 275 (945)
Q Consensus 230 AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~ 275 (945)
.|++ +.+.++..|||++..........++++++-+|.| +-..++
T Consensus 108 ~~~p-v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtG-iG~giv 151 (326)
T 2qm1_A 108 LGIP-FALDNDANVAALGERWKGAGENNPDVIFITLGTG-VGGGIV 151 (326)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEE
Confidence 4776 6789999999987533222123467888889988 555555
No 87
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=96.21 E-value=0.21 Score=53.86 Aligned_cols=45 Identities=24% Similarity=0.305 Sum_probs=31.8
Q ss_pred HcCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEE
Q psy2902 229 IAGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSII 275 (945)
Q Consensus 229 ~AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~ 275 (945)
..|++ +.+.++..|||++-.........++++++-+|.| +-..++
T Consensus 119 ~~~~p-V~v~NDa~aaalgE~~~g~~~~~~~~~~l~~GtG-iG~gii 163 (327)
T 4db3_A 119 KIGRS-VKIENDANCFALSEAWDEELQDAPSVMGLILGTG-FGGGLI 163 (327)
T ss_dssp HHSSC-CEEEEHHHHHHHHHHTSTTTTTCSEEEEEEESSS-EEEEEE
T ss_pred HHCCC-EEEecchhHHHHHHHHhCCCCCCCcEEEEEeCcc-ceEEEE
Confidence 34776 7899999999998755443344577888888887 444444
No 88
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=96.03 E-value=0.11 Score=55.83 Aligned_cols=46 Identities=20% Similarity=0.219 Sum_probs=31.3
Q ss_pred HHc-CCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEE
Q psy2902 228 RIA-GLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSII 275 (945)
Q Consensus 228 ~~A-Gl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~ 275 (945)
+.. |++ +.+.++..|||++-.........++++++-+|.| +-..++
T Consensus 115 ~~~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~gii 161 (321)
T 3r8e_A 115 SEFPHIH-FKIENDAKCAALGEYYFGENKRMQTFILLALGTG-VGSGVM 161 (321)
T ss_dssp HHCTTSE-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred HHcCCCC-EEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEE
Confidence 345 666 6799999999997644332234567888889988 555554
No 89
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=96.00 E-value=0.2 Score=53.25 Aligned_cols=45 Identities=18% Similarity=0.195 Sum_probs=30.1
Q ss_pred HcCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEE
Q psy2902 229 IAGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSII 275 (945)
Q Consensus 229 ~AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~ 275 (945)
..|++ +.+.++..|||++-.........++++++-+|.| +-..++
T Consensus 97 ~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii 141 (302)
T 3vov_A 97 ATGRP-VFLENDANAAALAEHHLGAAQGEESSLYLTVSTG-IGGGVV 141 (302)
T ss_dssp HHSSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred hhCCC-EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCc-eeEEEE
Confidence 35666 6799999999987654332234567888888887 344444
No 90
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.77 E-value=0.0034 Score=53.92 Aligned_cols=64 Identities=34% Similarity=0.401 Sum_probs=49.2
Q ss_pred CCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhccccCCCC
Q psy2902 576 GLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYGHAGIDPN 649 (945)
Q Consensus 576 ~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~~~g~~~~ 649 (945)
..+.++|.+..+++....++|+.. .. ...+.+.|..+.+||++|+++.+|+.||.++..++..+
T Consensus 20 ~as~~eIk~ayr~l~~~~HPDk~~---------~~-~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~ 83 (92)
T 2dmx_A 20 SASPEDIKKAYRKLALRWHPDKNP---------DN-KEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRAG 83 (92)
T ss_dssp TCCTTHHHHHHHHHHHHTCTTTCS---------SC-SHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCCC
T ss_pred CCCHHHHHHHHHHHHHHHCCCCCC---------cc-HHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccCC
Confidence 457889999999998888888631 11 11223467888999999999999999999998877643
No 91
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=95.76 E-value=0.3 Score=51.77 Aligned_cols=48 Identities=19% Similarity=0.214 Sum_probs=34.6
Q ss_pred CCcEEEecCccccHHHHHHHHHHhCCCC------CCCCCCCchhhhhHHHhhhh
Q psy2902 404 INDIILVGGMTRMPKVQEKVKEFFGKDP------RRDINPDEAVAVGAAIQGSV 451 (945)
Q Consensus 404 i~~ViLvGG~s~~p~v~~~l~~~fg~~~------~~~~~p~~avA~GAa~~a~~ 451 (945)
++.|+|.||.+..+.+.+.+++.+.... ......+.+.++|||.++..
T Consensus 238 p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 238 PTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 4689999999988878888887774221 12234567999999988754
No 92
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.72 E-value=0.0026 Score=54.12 Aligned_cols=62 Identities=32% Similarity=0.446 Sum_probs=49.7
Q ss_pred CCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhccccCCCC
Q psy2902 576 GLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYGHAGIDPN 649 (945)
Q Consensus 576 ~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~~~g~~~~ 649 (945)
..+.+||.+..+++....++|+... -.+...|..+.+||++|+++.+|+.||.++..++..+
T Consensus 18 ~as~~eIk~ayr~l~~~~HPDk~~~------------~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~ 79 (88)
T 2ctr_A 18 SASERQIKKAFHKLAMKYHPDKNKS------------PDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSG 79 (88)
T ss_dssp TCCHHHHHHHHHHHHHHTCTTTCCS------------HHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTCS
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCC------------hHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccccC
Confidence 4688999999999999888886321 0123567888999999999999999999998877644
No 93
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=95.48 E-value=0.0059 Score=52.37 Aligned_cols=59 Identities=39% Similarity=0.525 Sum_probs=48.1
Q ss_pred CCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhccccCCC
Q psy2902 576 GLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYGHAGIDP 648 (945)
Q Consensus 576 ~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~~~g~~~ 648 (945)
..+.+||.+..+++....++|+.. .+...|..+.+||++|+++++|+.||.++..+...
T Consensus 19 ~as~~eIk~ayr~l~~~~HPDk~~--------------~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~ 77 (92)
T 2o37_A 19 SANEQELKKGYRKAALKYHPDKPT--------------GDTEKFKEISEAFEILNDPQKREIYDQYGLEAARS 77 (92)
T ss_dssp TCCHHHHHHHHHHHHHHHCTTSTT--------------CCHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCC--------------ChHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhc
Confidence 468899999999998888888731 11247788899999999999999999999877653
No 94
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=95.38 E-value=0.0084 Score=49.50 Aligned_cols=60 Identities=38% Similarity=0.602 Sum_probs=48.5
Q ss_pred CCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhccccCC
Q psy2902 576 GLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYGHAGID 647 (945)
Q Consensus 576 ~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~~~g~~ 647 (945)
..|.++|.+..+++....++|+.. .. .+...|..+++||++|+++.+|..||.++..|+.
T Consensus 14 ~as~~~Ik~ayr~l~~~~HPD~~~---------~~---~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~ 73 (77)
T 1hdj_A 14 GASDEEIKRAYRRQALRYHPDKNK---------EP---GAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLK 73 (77)
T ss_dssp TCCHHHHHHHHHHHHHTTCTTTCC---------CT---THHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCC
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCC---------Cc---cHHHHHHHHHHHHHHHCCHHHHHHHHHHcccccc
Confidence 467899999999999888888632 11 1335678889999999999999999999988765
No 95
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=95.29 E-value=0.0055 Score=53.30 Aligned_cols=64 Identities=36% Similarity=0.514 Sum_probs=46.7
Q ss_pred CCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhccccCCCC
Q psy2902 576 GLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYGHAGIDPN 649 (945)
Q Consensus 576 ~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~~~g~~~~ 649 (945)
..|.+||.+..+++....++|+.. .. .-.+...|..+++||++|+++.+|+.||.++..++.+.
T Consensus 13 ~as~~eIk~aYr~la~~~HPDk~~---------~~-~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~~ 76 (99)
T 2lgw_A 13 SASADDIKKAYRRKALQWHPDKNP---------DN-KEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGT 76 (99)
T ss_dssp TSCHHHHHHHHHHHHHHTSTTTCC---------SC-CHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC-----
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCC---------cc-HHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccCC
Confidence 467899999999999988888631 11 11133567888999999999999999999998877643
No 96
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}
Probab=95.19 E-value=0.0038 Score=72.53 Aligned_cols=74 Identities=22% Similarity=0.339 Sum_probs=56.2
Q ss_pred eeeccccccccccceeeEeeccccccCCCCCccccccCc---CcccCCCCCCCceEe------------Eeecee-eeee
Q psy2902 693 RYNLEITLEQAAYGFNTSIRVPSWDICKSCYGNGAKKGT---SPISCFTCSGQGQVR------------MQQGFF-SIQQ 756 (945)
Q Consensus 693 ~~~l~~~~~~~~~g~~~~~~~~~~~~C~~C~G~G~~~~~---~~~~C~~C~G~G~~~------------~~~~~~-~~~~ 756 (945)
.++++++|+++..|.++.+.+.+...|..|+|+|...+. ...+|+.|+|+.... +..|.| +...
T Consensus 168 ~~~l~i~feeA~~G~~k~i~v~~~~~C~tCHGsGA~~Gt~~~~~~tC~tCHGs~~~~~~~~~~~~~iH~iH~G~fP~~~~ 247 (669)
T 3pmq_A 168 ITNQHYDWQSSGNMLAYTRNLVSIDTCNSCHSNLAFHGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSKHLTGFPQSIS 247 (669)
T ss_dssp SCCCEEEEECSSSSCCCCCCCCCSHHHHHHHSSCCTTTTTSCSSSCSTTTSSTTTCCCSSCSHHHHHHHHTTSSCSSCTT
T ss_pred eEEEEEEhHHhhCCCceEEEeccCCcCCCCCCCCCcCCccCcCCccCCCCCCCcccCCccccccceeeeeeccCCCCccC
Confidence 357778899999999999999999999999999998876 678999999994210 000111 2345
Q ss_pred cCCCCCCceE
Q psy2902 757 TCPKCQGAGK 766 (945)
Q Consensus 757 ~C~~C~G~g~ 766 (945)
.|..|+..+.
T Consensus 248 ~C~~CH~~~~ 257 (669)
T 3pmq_A 248 NCQTCHADNP 257 (669)
T ss_dssp CCTTTSCCCT
T ss_pred cchhhcCCcc
Confidence 6999988763
No 97
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=94.49 E-value=0.79 Score=49.20 Aligned_cols=44 Identities=18% Similarity=0.161 Sum_probs=29.7
Q ss_pred cCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEE
Q psy2902 230 AGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSII 275 (945)
Q Consensus 230 AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~ 275 (945)
.+++ +.+.++..|||++...........+++++-+|.| +-..++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc-EEEEEE
Confidence 4666 6899999999997543322123467888888888 445544
No 98
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=94.33 E-value=5.1 Score=42.90 Aligned_cols=67 Identities=18% Similarity=0.230 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHh---CCCCCCCC---CCCchhhhhHHHhhhhccC
Q psy2902 383 ITRTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFF---GKDPRRDI---NPDEAVAVGAAIQGSVLSG 454 (945)
Q Consensus 383 i~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f---g~~~~~~~---~p~~avA~GAa~~a~~~~~ 454 (945)
.+.+.+.+.++++..+ ++.|+|+||.+....+++.+.+.+ |.++..+. -.|.++++|+|.+.....+
T Consensus 234 ~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 234 FAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 3444455555665554 468999999999999999999887 55554332 2477999999876654444
No 99
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=94.26 E-value=1.2 Score=49.49 Aligned_cols=44 Identities=16% Similarity=0.237 Sum_probs=29.9
Q ss_pred cCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEE
Q psy2902 230 AGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSII 275 (945)
Q Consensus 230 AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~ 275 (945)
.|++ +.+.++..|||++...........+++++-+|.| +-..++
T Consensus 186 ~~~p-v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 186 TGVP-VYIQHDISAWTMAEALFGASRGARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCc-EEEEEE
Confidence 4776 6789999999997543322233467888888887 445555
No 100
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.06 E-value=0.019 Score=47.91 Aligned_cols=61 Identities=34% Similarity=0.459 Sum_probs=47.1
Q ss_pred CCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhccccC
Q psy2902 576 GLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYGHAGI 646 (945)
Q Consensus 576 ~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~~~g~ 646 (945)
..+.++|.+..+++....++|+... . .......|..+++||++|+++.+|..||.+++.+.
T Consensus 20 ~as~~eIk~ayr~l~~~~HPDk~~~---------~-~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 20 QASSEAIKKAYRKLALKWHPDKNPE---------N-KEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp TCCHHHHHHHHHHHHTTSCTTTCST---------T-HHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCC---------c-HHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 4688999999999988888886321 0 01223467888999999999999999999887654
No 101
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=93.95 E-value=0.82 Score=48.19 Aligned_cols=68 Identities=7% Similarity=-0.105 Sum_probs=40.2
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCcEEEecCcccc--HHHHHHHHHHhCCCCCCCCCCCchhhhhHHHhhhhc
Q psy2902 379 VDELITRTIEPCRIAIKDAGIKVSDINDIILVGGMTRM--PKVQEKVKEFFGKDPRRDINPDEAVAVGAAIQGSVL 452 (945)
Q Consensus 379 ~~~~i~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~--p~v~~~l~~~fg~~~~~~~~p~~avA~GAa~~a~~~ 452 (945)
...++++..+.+-..+ .... ..+.+.|+|.||.+.. +.+++.+++.. .+ ...|..+...||+.+|...
T Consensus 212 A~~i~~~~~~~La~~i-~~~~-~~~p~~vvlgGGv~~~~~~~l~~~l~~~~-~~---i~~~~~a~~~GA~~la~~~ 281 (291)
T 1zbs_A 212 VYSLVQNSFDDFLVRN-VLRY-NRPDLPLHFIGSVAFHYREVLSSVIKKRG-LT---LGSVLQSPMEGLIQYHHNN 281 (291)
T ss_dssp HHHHHHHHHHHHHHHH-TGGG-CCTTSCEEEESHHHHHTHHHHHHHHHHTT-CC---EEEEESCSHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHH-hccc-CCCCceEEEECchHHhhHHHHHHHHHHcC-Ce---ecccCcCHHHHHHHHHHhh
Confidence 3344444444444444 2211 1156789999998876 56666665532 11 2235678999999998643
No 102
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=93.75 E-value=1.7 Score=45.59 Aligned_cols=43 Identities=19% Similarity=0.171 Sum_probs=29.4
Q ss_pred HcCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEE
Q psy2902 229 IAGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSII 275 (945)
Q Consensus 229 ~AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~ 275 (945)
..|++ +.+.++..|||++... .....++++++-+|.| +-..++
T Consensus 93 ~~~~p-v~v~NDa~aaa~~e~~--~~~~~~~~v~l~~GtG-iG~giv 135 (292)
T 2gup_A 93 SYQLP-VHLENDANCVGLSELL--AHPELENAACVVIGTG-IGGAMI 135 (292)
T ss_dssp GGCCC-EEEEEHHHHHHHHHHH--HCTTCSSEEEEEESSS-EEEEEE
T ss_pred HcCCC-EEEechHHHHHHHHHH--hcCCCCeEEEEEECCc-eEEEEE
Confidence 35665 6799999999998644 1123466888889987 445544
No 103
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=93.72 E-value=1.2 Score=49.77 Aligned_cols=44 Identities=27% Similarity=0.288 Sum_probs=30.1
Q ss_pred cCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEE
Q psy2902 230 AGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSII 275 (945)
Q Consensus 230 AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~ 275 (945)
.|++ +.+.++..|||++...........+++++-+|.| +-..++
T Consensus 208 ~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 208 TGLP-VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-EEEEEE
Confidence 4776 6899999999997643322234567888888887 445555
No 104
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=93.63 E-value=2.6 Score=46.17 Aligned_cols=42 Identities=19% Similarity=0.231 Sum_probs=28.7
Q ss_pred cCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEE
Q psy2902 230 AGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSII 275 (945)
Q Consensus 230 AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~ 275 (945)
.|++ +.+.++..|||++...... .. .+++++-+|.| +-..++
T Consensus 188 ~~~p-V~v~NDanaaalaE~~~g~-~~-~~~v~l~~GtG-iG~giv 229 (380)
T 2hoe_A 188 YGIE-VWVENDADMGAVGEKWYTK-RD-DSFAWILTGKG-IGAGII 229 (380)
T ss_dssp HCSE-EEEEEHHHHHHHHHHHHTT-CC-SCEEEEEESSS-CEEEEE
T ss_pred hCCC-EEEechHHHHHHHHHHhCC-CC-CcEEEEEeCCc-eEEEEE
Confidence 4775 6899999999997643322 12 67888888887 345544
No 105
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=93.42 E-value=0.047 Score=54.78 Aligned_cols=64 Identities=31% Similarity=0.512 Sum_probs=51.2
Q ss_pred CCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhccccCCCCC
Q psy2902 576 GLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYGHAGIDPNM 650 (945)
Q Consensus 576 ~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~~~g~~~~~ 650 (945)
..+.+||.+..+++....++|+.. ... .+.+++..+.+||++|+++++|+.||.+++.+.....
T Consensus 13 ~a~~~~ik~ay~~l~~~~HPD~~~---------~~~--~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~~ 76 (210)
T 3apq_A 13 TASSREIRQAFKKLALKLHPDKNP---------NNP--NAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQ 76 (210)
T ss_dssp TCCHHHHHHHHHHHHHHHCGGGCT---------TCT--THHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTTC
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCC---------CCh--HHHHHHHHHHHHHHHhCCHHHHHHHHHhccccccccc
Confidence 468899999999999999999732 111 2345788889999999999999999999988876543
No 106
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.37 E-value=0.032 Score=48.46 Aligned_cols=55 Identities=22% Similarity=0.220 Sum_probs=43.6
Q ss_pred CCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHh
Q psy2902 576 GLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQY 641 (945)
Q Consensus 576 ~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~ 641 (945)
..+.+||.+..+++....++|+... . ..+...|..|.+||++|+++.+|+.||..
T Consensus 28 ~as~~eIk~ayr~l~~~~HPDk~~~---------~--~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~ 82 (99)
T 2yua_A 28 TATQAQIKAAYYRQCFLYHPDRNSG---------S--AEAAERFTRISQAYVVLGSATLRRKYDRG 82 (99)
T ss_dssp TCCHHHHHHHHHHHHHHSCTTTCSS---------C--SHHHHHHHHHHHHHHHTTSHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCC---------C--HHHHHHHHHHHHHHHHHCCHHHHHHHHHh
Confidence 4688999999999998888887321 0 11345788889999999999999999973
No 107
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.03 E-value=0.036 Score=45.73 Aligned_cols=58 Identities=34% Similarity=0.471 Sum_probs=45.9
Q ss_pred CCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhcccc
Q psy2902 576 GLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYGHAG 645 (945)
Q Consensus 576 ~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~~~g 645 (945)
..+.++|.+..+++....++|+.... .+...|..+.+||++|+++.+|..||.++..+
T Consensus 18 ~as~~eIk~ayr~l~~~~HPDk~~~~------------~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 18 GASDEDLKKAYRRLALKFHPDKNHAP------------GATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp TCCHHHHHHHHHHHHTTSCTTTCSSH------------HHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCCc------------cHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 46789999999999888888863211 12346778899999999999999999988654
No 108
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=92.97 E-value=5.1 Score=43.07 Aligned_cols=44 Identities=32% Similarity=0.226 Sum_probs=29.9
Q ss_pred cCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEE
Q psy2902 230 AGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSII 275 (945)
Q Consensus 230 AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~ 275 (945)
.|++ +.+.++..|||++...........+++++-+|.| +-..++
T Consensus 131 ~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 131 LHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEE
Confidence 4776 6789999999997644322233467888888887 445554
No 109
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.91 E-value=0.046 Score=45.22 Aligned_cols=59 Identities=34% Similarity=0.464 Sum_probs=46.2
Q ss_pred CCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhcccc
Q psy2902 576 GLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYGHAG 645 (945)
Q Consensus 576 ~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~~~g 645 (945)
..+.++|.+..+++....++|+.. ... .+...|..+.+||++|+++.+|..||.++..+
T Consensus 18 ~a~~~~Ik~ayr~l~~~~HPD~~~---------~~~--~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 18 NASQKEIKKAYYQLAKKYHPDTNK---------DDP--KAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp TCCHHHHHHHHHHHHHHTCTTTCS---------SCT--THHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCC---------CCH--HHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 467899999999998888888622 110 13456788899999999999999999987654
No 110
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=92.90 E-value=11 Score=40.34 Aligned_cols=43 Identities=30% Similarity=0.359 Sum_probs=30.2
Q ss_pred HHcCCccceecchhHHHHHHhccCC--------C--CCCCceEEEEEeCCcce
Q psy2902 228 RIAGLEVKRIINEPTAAALAFGLDK--------S--GKSDRNIVVYDLGGGTF 270 (945)
Q Consensus 228 ~~AGl~~v~li~Ep~AAAl~~~~~~--------~--~~~~~~vlVvD~GggT~ 270 (945)
+..|++.+.+.+|..|+|++-.... . ....++++++-+|.|-=
T Consensus 99 ~~~~~p~V~v~NDanaaalgE~~~~~~~~~~~g~g~~~~~~~~~~v~~GTGiG 151 (332)
T 1sz2_A 99 KNLGFSHLEIINDFTAVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGLG 151 (332)
T ss_dssp HHHTCSEEEEEEHHHHHHHHGGGCCGGGEEECSSCCCCTTCCEEEEEESSSEE
T ss_pred HHhCCCcEEEEeCHhHHhccccccChhhheecCCCCCCCCCcEEEEEcCccce
Confidence 4468887899999999999764421 0 12346688888998843
No 111
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.20 E-value=0.043 Score=48.84 Aligned_cols=61 Identities=20% Similarity=0.296 Sum_probs=48.8
Q ss_pred CCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhccccCC
Q psy2902 576 GLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYGHAGID 647 (945)
Q Consensus 576 ~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~~~g~~ 647 (945)
..+.++|.+..+++....++|+... .. .+...|..+.+||++|+++++|+.||.++..++.
T Consensus 31 ~as~~eIk~ayr~l~~~~HPDk~~~---------~~--~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~ 91 (112)
T 2ctq_A 31 LSSVEQILAEFKVRALECHPDKHPE---------NP--KAVETFQKLQKAKEILTNEESRARYDHWRRSQMS 91 (112)
T ss_dssp TSCHHHHHHHHHHHHHTTCTTTCTT---------CS--THHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCC---------cH--HHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence 4688999999999999888887321 11 2345788889999999999999999999887654
No 112
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=92.18 E-value=0.051 Score=45.99 Aligned_cols=57 Identities=32% Similarity=0.504 Sum_probs=45.5
Q ss_pred CCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhccc
Q psy2902 576 GLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYGHA 644 (945)
Q Consensus 576 ~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~~~ 644 (945)
..+.++|.+..+++....++|+... . .+.+.|..+.+||++|+++.+|..||.+++.
T Consensus 28 ~as~~eIk~ayr~l~~~~HPDk~~~---------~---~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 84 (88)
T 2cug_A 28 TASQADIKKAYKKLAREWHPDKNKD---------P---GAEDRFIQISKAYEILSNEEKRTNYDHYGSG 84 (88)
T ss_dssp TCCHHHHHHHHHHHHHHSCTTTCCS---------T---THHHHHHHHHHHHHHHHSHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCC---------h---hHHHHHHHHHHHHHHHCCHHHHHHHHHcCCC
Confidence 4678999999999988888886321 0 1335678889999999999999999998764
No 113
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=91.41 E-value=0.12 Score=41.88 Aligned_cols=54 Identities=37% Similarity=0.514 Sum_probs=43.4
Q ss_pred CCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhcc
Q psy2902 576 GLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYGH 643 (945)
Q Consensus 576 ~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~~ 643 (945)
..+.++|.+..+++....++|+.. .....|..+.+||++|+++.+|+.||.+|+
T Consensus 19 ~a~~~eIk~ayr~l~~~~HPD~~~--------------~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 19 DASDNELKKAYRKMALKFHPDKNP--------------DGAEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp TCCHHHHHHHHHHHHHHTCTTTCT--------------TCHHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCc--------------CHHHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 467899999999988888888631 113467788999999999999999999875
No 114
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=90.98 E-value=0.061 Score=47.58 Aligned_cols=61 Identities=31% Similarity=0.448 Sum_probs=48.4
Q ss_pred CCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhccccCC
Q psy2902 576 GLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYGHAGID 647 (945)
Q Consensus 576 ~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~~~g~~ 647 (945)
..+.+||.+..+++....++|+... . ..+.+.|..+.+||++|+++.+|+.||.++..|+.
T Consensus 28 ~as~~eIk~aYr~la~~~HPDk~~~---------~--~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~ 88 (109)
T 2ctw_A 28 NATSDDIKKSYRKLALKYHPDKNPD---------N--PEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88 (109)
T ss_dssp TCCHHHHHHHHHHHHHHSCTTTSTT---------C--HHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCC---------c--HHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence 4688999999999999888887421 0 01345788889999999999999999999877643
No 115
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=90.64 E-value=0.2 Score=44.26 Aligned_cols=59 Identities=22% Similarity=0.327 Sum_probs=44.6
Q ss_pred CcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhcc
Q psy2902 577 LTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYGH 643 (945)
Q Consensus 577 ~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~~ 643 (945)
++.+||.+..+++....++|+... .+....+...+..+++||++|+++.+|+.||.++.
T Consensus 28 ~s~~eIk~aYr~l~~~~HPDk~~~--------~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 28 FDKQKLAKAYRALARKHHPDRVKN--------KEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp CCHHHHHHHHHHHHHHTCGGGCCS--------HHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHCcCCCCC--------ccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 488999999999999899995321 00001123477888999999999999999999764
No 116
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=90.61 E-value=19 Score=37.81 Aligned_cols=63 Identities=17% Similarity=0.208 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCCCCcEEEecCccc--cHHHHHHHHHHhCCCCCCCCCCCchhhhhHHHhhh
Q psy2902 379 VDELITRTIEPCRIAIKDAGIKVSDINDIILVGGMTR--MPKVQEKVKEFFGKDPRRDINPDEAVAVGAAIQGS 450 (945)
Q Consensus 379 ~~~~i~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~--~p~v~~~l~~~fg~~~~~~~~p~~avA~GAa~~a~ 450 (945)
...++++..+.+-..+...-. . +.+.|+|.||.+. .|++.+.+++.+ ..|+.+.+.|||++|.
T Consensus 228 A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i-------~~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 228 ADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRL-------VAPQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHC-------CCCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhc-------cCCCCCHHHHHHHHHh
Confidence 344455555555555544322 2 5678999999875 566777776653 1256788999999885
No 117
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=88.20 E-value=1.3 Score=47.17 Aligned_cols=78 Identities=17% Similarity=0.243 Sum_probs=47.8
Q ss_pred HHHHHHHHHHcCCccceecchhHHHHHHhccCCCCC-CCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEecCCCCCc
Q psy2902 220 RQATKDAGRIAGLEVKRIINEPTAAALAFGLDKSGK-SDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLG 298 (945)
Q Consensus 220 r~~l~~Aa~~AGl~~v~li~Ep~AAAl~~~~~~~~~-~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~~~lG 298 (945)
.+.+.++-+..|+++-.+-.|-+|...+.+...... .....+|+|+|||+|.+++++- +.+.. .....+|
T Consensus 92 ~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~------~~~~~---~~Sl~lG 162 (315)
T 3mdq_A 92 QVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNK------NEILW---KQSFEIG 162 (315)
T ss_dssp HHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECS------SCEEE---EEEESCC
T ss_pred HHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEEC------CeEee---eEEEech
Confidence 345566666789987555566666544444322211 2457999999999999999852 22221 1124568
Q ss_pred hHHHHHHH
Q psy2902 299 GEDFDQRI 306 (945)
Q Consensus 299 G~~iD~~l 306 (945)
...+.+.+
T Consensus 163 ~vrl~e~f 170 (315)
T 3mdq_A 163 GQRLIDRF 170 (315)
T ss_dssp HHHHHHHS
T ss_pred hhHHHHHh
Confidence 77776654
No 118
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=87.46 E-value=0.12 Score=49.56 Aligned_cols=50 Identities=18% Similarity=0.159 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhcc
Q psy2902 579 EEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYGH 643 (945)
Q Consensus 579 ~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~~ 643 (945)
.+||.+..+++....++|+.. +.+.+..+++||++|+++.+|+.||.+|.
T Consensus 27 ~~eIKkAYRkLa~~~HPDk~~---------------~~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 27 IPLMRKAYLKKCKEFHPDKGG---------------DEEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHHHHHHGGGCSCC------------------CCTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred HHHHHHHHHHHHHHHCcCCCC---------------CHHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 577777777777777777621 13578889999999999999999999875
No 119
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=87.28 E-value=1.9 Score=45.54 Aligned_cols=41 Identities=20% Similarity=0.163 Sum_probs=27.5
Q ss_pred ccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEE
Q psy2902 233 EVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEI 277 (945)
Q Consensus 233 ~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~ 277 (945)
+.-....-|.|.|....... ....+++|+|+.|||+..+.-
T Consensus 106 p~~~aaanw~ASa~~~A~~~----~~~~llvDIGsTTTDIipi~~ 146 (334)
T 3cet_A 106 NMKVSASNWCGTAKWVSKNI----EENCILVDMGSTTTDIIPIVE 146 (334)
T ss_dssp GGGTBCCSSHHHHHHHHHHT----CSSEEEEEECSSCEEEEEEET
T ss_pred HHHHHhcCHHHHHHHHHHhc----CCCEEEEEcCcchhhhhhhcC
Confidence 33445677777776332221 124789999999999999873
No 120
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=86.93 E-value=8.3 Score=44.36 Aligned_cols=184 Identities=17% Similarity=0.190 Sum_probs=93.4
Q ss_pred CCCcEEEEc-CCCCCHHHHHHH--HHHHHHcCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEe
Q psy2902 203 EITEAVITV-PAYFNDAQRQAT--KDAGRIAGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIAD 279 (945)
Q Consensus 203 ~~~~~VitV-Pa~~~~~qr~~l--~~Aa~~AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~ 279 (945)
+++.+++|. |..|+....-.. +..|...|++.+ -++.-.|-+++.........+ +++-+.||++.+..+.
T Consensus 72 ~id~ia~~~gPG~~~~l~vg~~~ak~la~~~~~p~~-~v~h~~aH~~~~~~~~~~~~p---~~l~vsGg~t~~~~~~--- 144 (540)
T 3en9_A 72 EIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPII-GVNHCIAHIEIGKLTTEAEDP---LTLYVSGGNTQVIAYV--- 144 (540)
T ss_dssp GCCEEEEEEESSCHHHHHHHHHHHHHHHHHHTCCEE-EEEHHHHHHHHHHHHSSCSSC---EEEEECSSCEEEEEEE---
T ss_pred HCcEEEEecCCCchhhHHHHHHHHHHHHHHhCCCee-EeccHHHHHHHHHHhcCCCCC---cEEEEcCCCcEEEEEe---
Confidence 467777777 877764432221 233444576654 456666665544333322223 4455667777665443
Q ss_pred ecCCceEEEEEecCCCCCchHHHHHHHHHHHHHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHhcCCcceeeeeceeecc
Q psy2902 280 VDGEKQFEVLSTNGDTFLGGEDFDQRIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMS 359 (945)
Q Consensus 280 ~~~~~~~~vl~~~~~~~lGG~~iD~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~i~i~~~~~~ 359 (945)
.+.+++++..-+.. -|+.||..- .. .+......+ .|...|... . ..+.+|.....
T Consensus 145 ---~~~~~~lg~t~d~s-~G~~~D~~a-~~--------lgl~~~gg~----~ie~lA~~g------~--~~~~~p~~~~~ 199 (540)
T 3en9_A 145 ---SKKYRVFGETLDIA-VGNCLDQFA-RY--------VNLPHPGGP----YIEELARKG------K--KLVDLPYTVKG 199 (540)
T ss_dssp ---TTEEEEEEEBSSSC-HHHHHHHHH-HH--------TTCCSSCHH----HHHHHHHTC------C--CCCCCCCCEET
T ss_pred ---CCceEEEeeccchH-hHHHHHHHH-HH--------cCCCCCCHH----HHHHHHHcC------C--ccCcCCCCCCC
Confidence 36788888766443 567776432 21 233222111 222222211 1 11222222111
Q ss_pred CCCCeEEEEE-------------EcHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHH
Q psy2902 360 NGAPVHLNLK-------------ITRAKLELLVDE-LITRTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKE 425 (945)
Q Consensus 360 ~~~~~~~~~~-------------itr~~~e~~~~~-~i~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~ 425 (945)
. ++++. .+.+++-..++. +++.+.+.+..+++..+ ++.|+|+||-+....+++.+.+
T Consensus 200 ~----~~sfsgl~~~~~~~~~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~ 270 (540)
T 3en9_A 200 M----DIAFSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKA 270 (540)
T ss_dssp T----EECCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHH
T ss_pred c----ceecHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHH
Confidence 0 11110 112333322222 33344455556666654 4699999999999999999998
Q ss_pred Hh
Q psy2902 426 FF 427 (945)
Q Consensus 426 ~f 427 (945)
.+
T Consensus 271 ~~ 272 (540)
T 3en9_A 271 MC 272 (540)
T ss_dssp HH
T ss_pred HH
Confidence 76
No 121
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=84.97 E-value=1.8 Score=46.60 Aligned_cols=83 Identities=19% Similarity=0.180 Sum_probs=47.2
Q ss_pred HHHHHHHHHcCCccceecchhHHHHHHhccCCCCC---CCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEecCCCCC
Q psy2902 221 QATKDAGRIAGLEVKRIINEPTAAALAFGLDKSGK---SDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFL 297 (945)
Q Consensus 221 ~~l~~Aa~~AGl~~v~li~Ep~AAAl~~~~~~~~~---~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~~~l 297 (945)
+.+.++-+..|+++-.+-.|-+|...+.+...... ....++|+|+|||+|+++++.-......+.+. ......+
T Consensus 106 ~fl~~v~~~tGi~ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~---~~~Slpl 182 (343)
T 3cer_A 106 EFEDEIERILGVRPEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQ---GAFSMNI 182 (343)
T ss_dssp HHHHHHHHHHSSCCEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCS---EEEEESC
T ss_pred HHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeecCccCcccccc---eeEEEeh
Confidence 45566666779986544445555444444322212 34569999999999999987420000001010 0112457
Q ss_pred chHHHHHHH
Q psy2902 298 GGEDFDQRI 306 (945)
Q Consensus 298 GG~~iD~~l 306 (945)
|+..+.+.+
T Consensus 183 G~v~lt~~~ 191 (343)
T 3cer_A 183 GSVRMTERH 191 (343)
T ss_dssp CHHHHHHHT
T ss_pred hHHHHHHHh
Confidence 998888765
No 122
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=84.86 E-value=0.28 Score=41.93 Aligned_cols=62 Identities=18% Similarity=0.246 Sum_probs=43.9
Q ss_pred CCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhc
Q psy2902 576 GLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYG 642 (945)
Q Consensus 576 ~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~ 642 (945)
..+.+||.+..+++....++|+.... ...+..-.+...|..|.+||++|+++.+|+.||...
T Consensus 27 ~as~~eIk~aYr~l~~~~HPDk~~~~-----~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l 88 (94)
T 1wjz_A 27 SANMSDLKQKYQKLILLYHPDKQSAD-----VPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQR 88 (94)
T ss_dssp TCCHHHHHHHHHHTTSSSCSTTCCTT-----CCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCCC-----CChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHc
Confidence 46788999999888888888873200 000000123357888899999999999999999864
No 123
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=83.68 E-value=2.5 Score=48.36 Aligned_cols=111 Identities=19% Similarity=0.184 Sum_probs=60.7
Q ss_pred hHHHHHHHHHHHHHHHHhCCCCCcEEEEcCCCCCHHHH------HHHHHHHHHcCCccceecchhHHHHHHhccCCCCCC
Q psy2902 183 QISAEVLRKMKKTAEDYLGGEITEAVITVPAYFNDAQR------QATKDAGRIAGLEVKRIINEPTAAALAFGLDKSGKS 256 (945)
Q Consensus 183 ev~a~~L~~l~~~a~~~~~~~~~~~VitVPa~~~~~qr------~~l~~Aa~~AGl~~v~li~Ep~AAAl~~~~~~~~~~ 256 (945)
+.+...+..|....+..-...+.++.+ .-|..-| +.+.++-+..|+++-.+-.|-+|...+.+.......
T Consensus 60 eai~r~~~~L~~f~~~~~~~~v~~v~~----vATsA~R~A~N~~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~~~~ 135 (513)
T 1u6z_A 60 EAMTRGLNCLSLFAERLQGFSPASVCI----VGTHTLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPE 135 (513)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCGGGEEE----EECHHHHHCTTHHHHHHHHTTTCSSCEEECCHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCEEEE----EecHHHHcCcCHHHHHHHHHHHHCCCEEEeCHHHHHHHHHHHHHhhccC
Confidence 344445555555544433344544322 1233333 444555556798865444455554444443322222
Q ss_pred CceEEEEEeCCcceEEEEEEEEeecCCceEEEEEecCCCCCchHHHHHHH
Q psy2902 257 DRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRI 306 (945)
Q Consensus 257 ~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~~~lGG~~iD~~l 306 (945)
....+|+|+|||+|.+++.+- +.+.. .....+|...+.+.+
T Consensus 136 ~~~~lviDIGGGStEl~~~~~------~~~~~---~~Sl~lG~vrlte~f 176 (513)
T 1u6z_A 136 KGRKLVIDIGGGSTELVIGEN------FEPIL---VESRRMGCVSFAQLY 176 (513)
T ss_dssp CSCEEEEEECSSCEEEEEEET------TEEEE---EEEESCCHHHHHHHH
T ss_pred CCCEEEEEECCCcEEEEEEeC------CeeeE---EEEEeccHHHHHHHH
Confidence 236999999999999998752 22211 122467998888776
No 124
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=82.48 E-value=0.34 Score=59.06 Aligned_cols=63 Identities=32% Similarity=0.509 Sum_probs=30.4
Q ss_pred CCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhccccCCCC
Q psy2902 576 GLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYGHAGIDPN 649 (945)
Q Consensus 576 ~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~~~g~~~~ 649 (945)
..|.+||.+..+++....++|+.... ..+.+.+..+++||++|+++++|+.||.+|+.|+..+
T Consensus 32 ~a~~~~i~~ay~~l~~~~hpd~~~~~-----------~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~ 94 (780)
T 3apo_A 32 TASSREIRQAFKKLALKLHPDKNPNN-----------PNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN 94 (780)
T ss_dssp TCCHHHHHHHHCC----------------------------------CTHHHHHHSHHHHHHHTTC--------
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCCC-----------hHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccC
Confidence 46899999999999999999984311 1234567888999999999999999999999887654
No 125
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=82.18 E-value=4.7 Score=41.18 Aligned_cols=19 Identities=37% Similarity=0.529 Sum_probs=17.0
Q ss_pred eEEEEcCccceEEEEEeCC
Q psy2902 73 IIGIDLGTTNSCVSIIEGS 91 (945)
Q Consensus 73 viGID~GTt~s~va~~~~~ 91 (945)
+++||+|+|+++.++++++
T Consensus 5 ~L~IDIGNT~ik~gl~~~~ 23 (249)
T 3bex_A 5 YLLVDVGNTHSVFSITEDG 23 (249)
T ss_dssp EEEEEECSSEEEEEEESSS
T ss_pred EEEEEECCCeEEEEEEECC
Confidence 6999999999999999754
No 126
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=80.53 E-value=1.4 Score=49.52 Aligned_cols=56 Identities=13% Similarity=-0.027 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHcCCc--cceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEE
Q psy2902 218 AQRQATKDAGRIAGLE--VKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEI 277 (945)
Q Consensus 218 ~qr~~l~~Aa~~AGl~--~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~ 277 (945)
.-++.+.++....|++ ++.++++..|++++..+.. .++++.+=+|.|+=-..+...
T Consensus 164 ~v~~~L~~~l~r~glpv~vval~NDa~~tll~e~~~~----~~~~iglilGTGvgg~~i~~~ 221 (457)
T 2yhx_A 164 KLISAMXNAXFPAGDXXXSVADIXDSHGILXXVNYTD----AXIKMGIIFGSGVNAAYWCDS 221 (457)
T ss_dssp SBHHHHHHHHHHHHCCEEEEEEECHHHHHHHHHHHHC----TTEEEEEEESSSEEEEEEECG
T ss_pred HHHHHHHHhHhhcCCcceeEEEEecchhhccchhhcC----CccEEEEEECcEEEEEEEECC
Confidence 5677888888666775 4789999999999876632 456777779998665555544
No 127
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=80.40 E-value=0.41 Score=46.34 Aligned_cols=54 Identities=19% Similarity=0.238 Sum_probs=44.5
Q ss_pred CCCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhc
Q psy2902 575 SGLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYG 642 (945)
Q Consensus 575 ~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~ 642 (945)
+..+.++|.+..+++....++|+.. . +...|..+++||++|+|+.+|..||..-
T Consensus 28 ~~a~~~eIk~aYr~la~~~HPDk~~---------~-----a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 28 WTIDQSRLRKEYRQLQAQHHPDMAQ---------Q-----GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp SCCCHHHHHHHHHHHHHTCCTTSCC---------S-----CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHhCcCCCc---------c-----HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 3578899999999988888888721 1 4568889999999999999999999743
No 128
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=79.89 E-value=1.1 Score=50.38 Aligned_cols=59 Identities=10% Similarity=0.054 Sum_probs=43.8
Q ss_pred CHHHHHHHHHHHHHcCCcc--ceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEE
Q psy2902 216 NDAQRQATKDAGRIAGLEV--KRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIA 278 (945)
Q Consensus 216 ~~~qr~~l~~Aa~~AGl~~--v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~ 278 (945)
...-.+.+++|...-|+++ +.++++..|++++..+.. .++++-+=+|.|+=-+.+..+.
T Consensus 184 G~dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~----~~~~iglIlGTG~N~~y~e~~~ 244 (485)
T 3o8m_A 184 GHDVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTD----PQTKMGIIIGTGVNGAYYDVVS 244 (485)
T ss_dssp TSBHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHC----TTEEEEEEESSSEEEEEEEEGG
T ss_pred CccHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCC----CCcEEEEEEecCcceEEEeecc
Confidence 3566788999998889863 679999999999876553 3566666789887666655543
No 129
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=79.63 E-value=2.8 Score=47.78 Aligned_cols=76 Identities=24% Similarity=0.285 Sum_probs=46.0
Q ss_pred HHHHHHHHHHcCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEEEeecCCceEEEEEecCCCCCch
Q psy2902 220 RQATKDAGRIAGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGG 299 (945)
Q Consensus 220 r~~l~~Aa~~AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~~~~~~~~~~~vl~~~~~~~lGG 299 (945)
.+.+.++-+..|+++-.+-.|-+|...+.+....... ...+|+|+|||+|.+++.+- +.+. ......+|.
T Consensus 103 ~~fl~~i~~~tG~~ievIsG~EEA~l~~~gv~~~~~~-~~~lvvDIGGGStEl~~~~~------~~~~---~~~Sl~lG~ 172 (508)
T 3hi0_A 103 PDFIREAEAILGCEIEVLSGEKEALYSAYGVISGFYQ-PDGIAGDLGGGSLELIDIKD------KSCG---EGITLPLGG 172 (508)
T ss_dssp HHHHHHHHHHHTSCEEECCHHHHHHHHHHHHHHHSSS-CEEEEEEECSSCEEEEEEET------TEEC---CCEEESCCH
T ss_pred HHHHHHHHHHHCCCeEEecHHHHHHHHHHHHHhcCCC-CCeEEEEeCCCceEEEEeeC------Ceee---eEEEecceE
Confidence 4456666667899875555555555544444322222 34599999999999999862 1111 112345688
Q ss_pred HHHHHH
Q psy2902 300 EDFDQR 305 (945)
Q Consensus 300 ~~iD~~ 305 (945)
..+.+.
T Consensus 173 vrl~e~ 178 (508)
T 3hi0_A 173 LRLSEQ 178 (508)
T ss_dssp HHHHHH
T ss_pred Eehhhc
Confidence 777653
No 130
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=78.84 E-value=0.46 Score=47.06 Aligned_cols=59 Identities=19% Similarity=0.133 Sum_probs=44.2
Q ss_pred CCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHH
Q psy2902 576 GLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQ 640 (945)
Q Consensus 576 ~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~ 640 (945)
..+.++|.+..+++....++|+....-. .+ ...+...+..|++||++|+|+.+|..||.
T Consensus 56 ~a~~~eIk~aYr~L~~~~HPDk~~~~~~-----~e-~~~a~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 56 RVDTAKLQHRYQQLQRLVHPDFFSQRSQ-----TE-KDFSEKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp CCCHHHHHHHHHHHHHHHCGGGGTTSCH-----HH-HHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCCCCH-----HH-HHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 4678999999999999999998431000 00 01133567889999999999999999986
No 131
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=77.90 E-value=0.52 Score=41.77 Aligned_cols=47 Identities=17% Similarity=0.205 Sum_probs=39.4
Q ss_pred HHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhccc
Q psy2902 598 RLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYGHA 644 (945)
Q Consensus 598 ~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~~~ 644 (945)
..+++++++|.+|+++|.+++.+....+.+.++++++.++.+.+.+.
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~ 49 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEV 49 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHH
Confidence 45788999999999999999988744577899999999888877653
No 132
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=77.09 E-value=1.1 Score=43.17 Aligned_cols=60 Identities=15% Similarity=0.207 Sum_probs=44.0
Q ss_pred CCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHh
Q psy2902 576 GLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQY 641 (945)
Q Consensus 576 ~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~ 641 (945)
.++.++|.+..+++....++|+..-.-.. ....+...+..|++||++|+++.+|..||.-
T Consensus 17 ~id~~eIk~aYr~l~~~~HPDk~~~~~~~------e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 76 (174)
T 3hho_A 17 ELDGSLLSSQFRALQKRFHPDNFATASER------DRLMAVQQAAQINDAYQTLKDPLRRAEYLLS 76 (174)
T ss_dssp CCCHHHHHHHHHHHHHHHCGGGSTTSCHH------HHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCCCcHH------HHHHHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 34599999999999999999983210000 0011335788889999999999999999964
No 133
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=76.61 E-value=8.2 Score=40.61 Aligned_cols=44 Identities=18% Similarity=0.122 Sum_probs=30.0
Q ss_pred cCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEE
Q psy2902 230 AGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSII 275 (945)
Q Consensus 230 AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~ 275 (945)
.|++ +.+.++..|||++-.........++++++-+|.| +-..++
T Consensus 97 ~~~p-V~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtG-iG~gii 140 (302)
T 3epq_A 97 MXIP-VGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTG-IGAGAI 140 (302)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEE
Confidence 4776 6899999999997644332234567888888876 444444
No 134
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=75.22 E-value=0.88 Score=43.62 Aligned_cols=62 Identities=16% Similarity=0.118 Sum_probs=45.7
Q ss_pred CCCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhc
Q psy2902 575 SGLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYG 642 (945)
Q Consensus 575 ~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~ 642 (945)
..++.++|.+..+++....++|+....-.. ....+...+..|++||++|+++.+|..||..-
T Consensus 13 a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~------e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 13 YQLDTQALSLRFQDLQRQYHPDKFASGSQA------EQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp SCCCHHHHHHHHHHHHHHTCGGGGTTSCHH------HHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHhCcCCCCCCCHH------HHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 345899999999999999999974310000 00012357888999999999999999999753
No 135
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=72.86 E-value=8.7 Score=45.96 Aligned_cols=61 Identities=18% Similarity=0.347 Sum_probs=44.8
Q ss_pred HHHHHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHh---CCCCCCCC---CCCchhhhhHHHhhhhc
Q psy2902 387 IEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFF---GKDPRRDI---NPDEAVAVGAAIQGSVL 452 (945)
Q Consensus 387 ~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f---g~~~~~~~---~p~~avA~GAa~~a~~~ 452 (945)
.+.+..+.++.+ ++.|+|+||.+....+++.+.+.+ |.++..+. -.|..+|+|+|++|+..
T Consensus 694 ~~~~~~a~~~tg-----~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~ 760 (772)
T 4g9i_A 694 AHTAVERAREFG-----VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLY 760 (772)
T ss_dssp HHHHHHHHHTTT-----CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-----cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHH
Confidence 344455555443 578999999999999999999887 45554432 23788999999988653
No 136
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=72.17 E-value=1.2 Score=36.61 Aligned_cols=46 Identities=7% Similarity=-0.003 Sum_probs=36.7
Q ss_pred CcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHH
Q psy2902 577 LTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRII 637 (945)
Q Consensus 577 ~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~ 637 (945)
.+.++|.+..+++....++|+. .+..+|..+++||++|+++.++..
T Consensus 25 a~~~eIk~aYr~la~~~HPDk~---------------~~~~~f~~i~~AYe~L~~~~~r~~ 70 (79)
T 1faf_A 25 GDFGRMQQAYKQQSLLLHPDKG---------------GSHALMQELNSLWGTFKTEVYNLR 70 (79)
T ss_dssp TCHHHHHHHHHHHHHHSSGGGS---------------CCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHCcCCC---------------CCHHHHHHHHHHHHHHhhHHHHHH
Confidence 6788888888888888888852 123578899999999999888775
No 137
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=71.96 E-value=16 Score=40.52 Aligned_cols=43 Identities=19% Similarity=0.317 Sum_probs=26.1
Q ss_pred cceecchhHHHHHHh-----ccCCCC-CCCceEEEEEeCCcceEEEEEE
Q psy2902 234 VKRIINEPTAAALAF-----GLDKSG-KSDRNIVVYDLGGGTFDVSIIE 276 (945)
Q Consensus 234 ~v~li~Ep~AAAl~~-----~~~~~~-~~~~~vlVvD~GggT~dvsv~~ 276 (945)
.+++|+-.+=|.++| ....-. ....++.++|+|||++.++...
T Consensus 151 ~v~iisG~eEg~y~wi~vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 151 GAKIITGQEEGAYGWITINYLLGRFKTPGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEECCHHHHHHHHHHHHHHHTTTTC---CCCCEEEEECSSEEEEEECC
T ss_pred ceEECCchhhhhhhHHHHHhhhccccCCCCCceEEEecCCCceEEEecc
Confidence 466666555444433 222110 1246788999999999999764
No 138
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=71.88 E-value=1.9 Score=48.90 Aligned_cols=22 Identities=41% Similarity=0.353 Sum_probs=17.2
Q ss_pred CCceEEEEcCccceEEEEEeCC
Q psy2902 70 MSKIIGIDLGTTNSCVSIIEGS 91 (945)
Q Consensus 70 m~~viGID~GTt~s~va~~~~~ 91 (945)
|.+++|||+|||++++++++.+
T Consensus 5 m~~~lgIDiGTts~Ka~l~d~~ 26 (482)
T 3h6e_A 5 TGATIVIDLGKTLSKVSLWDLD 26 (482)
T ss_dssp ---CEEEEECSSEEEEEEECTT
T ss_pred hceEEEEEcCCCCeEEEEEECC
Confidence 4578999999999999998754
No 139
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=70.10 E-value=22 Score=36.80 Aligned_cols=47 Identities=13% Similarity=0.157 Sum_probs=32.5
Q ss_pred CCcEEEecCccccHHHHHHHHHHhCCC-------CCCCCCCCchhhhhHHHhhh
Q psy2902 404 INDIILVGGMTRMPKVQEKVKEFFGKD-------PRRDINPDEAVAVGAAIQGS 450 (945)
Q Consensus 404 i~~ViLvGG~s~~p~v~~~l~~~fg~~-------~~~~~~p~~avA~GAa~~a~ 450 (945)
++.|+|.||.+..+.+.+.+++.+... +......+.+.++|||.++.
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~ 287 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLAQ 287 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHHh
Confidence 467889998887788888887776432 11223346688999998763
No 140
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=67.87 E-value=46 Score=33.88 Aligned_cols=44 Identities=30% Similarity=0.419 Sum_probs=29.0
Q ss_pred cCCccceecchhHHHHHHhccCCCCCC-CceEEEEEeCCcceEEEEE
Q psy2902 230 AGLEVKRIINEPTAAALAFGLDKSGKS-DRNIVVYDLGGGTFDVSII 275 (945)
Q Consensus 230 AGl~~v~li~Ep~AAAl~~~~~~~~~~-~~~vlVvD~GggT~dvsv~ 275 (945)
.|++ +.+.++..|||++......... ...++++-+|.| +-..++
T Consensus 114 ~~~p-V~v~NDanaaalaE~~~g~~~~~~~~~~~l~~GtG-IG~giv 158 (267)
T 1woq_A 114 LGRP-VEVINDADAAGLAEARYGAGAGVKGTVLVITLGTG-IGSAFI 158 (267)
T ss_dssp HTSC-EEEEEHHHHHHHHHHHHSTTTTCCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEeehhHHHHHHHHHhCCCCCCCCcEEEEEECcc-eEEEEE
Confidence 4776 6899999999998543222122 235777788887 555555
No 141
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=67.69 E-value=5.1 Score=44.84 Aligned_cols=57 Identities=16% Similarity=0.147 Sum_probs=42.3
Q ss_pred CHHHHHHHHHHHHHcCCcc--ceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEE
Q psy2902 216 NDAQRQATKDAGRIAGLEV--KRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIE 276 (945)
Q Consensus 216 ~~~qr~~l~~Aa~~AGl~~--v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~ 276 (945)
...-.+.+++|...-|+++ +.++++..|++++..... ..+++-+=+|.|+=-..+..
T Consensus 171 g~dv~~~L~~al~r~~l~v~v~al~NDtv~tlla~~y~~----~~~~iglIlGTG~na~yve~ 229 (451)
T 1bdg_A 171 GHNVAELLQTELDKRELNVKCVAVVNDTVGTLASCALED----PKCAVGLIVGTGTNVAYIED 229 (451)
T ss_dssp TSBHHHHHHHHHHTTTCCEEEEEEECHHHHHHHHHHTTC----TTEEEEEEESSSEEEEEEEE
T ss_pred CCcHHHHHHHHHHHcCCCcceEEEEEchHHHHHHhcccC----CCcEEEEEEeCCcceEEEEc
Confidence 4566788888888778863 589999999999876653 35667777899865555554
No 142
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=66.47 E-value=21 Score=38.62 Aligned_cols=45 Identities=29% Similarity=0.372 Sum_probs=30.6
Q ss_pred HcCCccceecchhHHHHHHhccCC-------------CCCCCceEEEEEeCCcceEEEEE
Q psy2902 229 IAGLEVKRIINEPTAAALAFGLDK-------------SGKSDRNIVVYDLGGGTFDVSII 275 (945)
Q Consensus 229 ~AGl~~v~li~Ep~AAAl~~~~~~-------------~~~~~~~vlVvD~GggT~dvsv~ 275 (945)
..|++ +.+.++..|+|++-.... .....++++++-+|.| +-..++
T Consensus 107 ~~g~P-V~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~~~~~~~v~l~lGtG-IG~giv 164 (366)
T 3mcp_A 107 IFGIP-VFINNDGSLFAYGEALTGVLPEINRRLREAGSTKRYKNLLGVTLGTG-FGAGVV 164 (366)
T ss_dssp HHCSC-EEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCCCEEEEEEESSS-EEEEEE
T ss_pred HHCCC-EEEechhhHHHHHHHHhCCCcccccccccccccCCCCcEEEEEECCc-ceEEEE
Confidence 34887 689999999999754433 2234577888888876 444444
No 143
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=65.33 E-value=12 Score=40.14 Aligned_cols=72 Identities=13% Similarity=0.123 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHhC-CCCC----CCCCCCchhhhhHHHhhhh
Q psy2902 377 LLVDELITRTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFG-KDPR----RDINPDEAVAVGAAIQGSV 451 (945)
Q Consensus 377 ~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg-~~~~----~~~~p~~avA~GAa~~a~~ 451 (945)
++..-+.+-+...|.+.++.... .++.|+++||+++.|.+.++|++.++ .++. ...+++.-=|..-|++|..
T Consensus 260 Dv~ATLt~~TA~sIa~~~~~~~~---~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~ 336 (371)
T 3qbx_A 260 DIQATLLELSARSISESLLDAQP---DCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHR 336 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCT---TCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccC---CCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHH
Confidence 33444444445555566655432 35789999999999999999999985 3332 1334554444456666654
No 144
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=64.64 E-value=3.7 Score=38.50 Aligned_cols=62 Identities=18% Similarity=0.242 Sum_probs=44.1
Q ss_pred CCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhc
Q psy2902 576 GLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYG 642 (945)
Q Consensus 576 ~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~ 642 (945)
..+.++|.+..+++....++|+.... ...+....+.+.+..|++||++|+|+.+|+.||...
T Consensus 21 ~a~~~eIk~aYr~l~~~~HPDk~~~~-----~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~ 82 (155)
T 2l6l_A 21 SANISDLKQKYQKLILMYHPDKQSTD-----VPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQR 82 (155)
T ss_dssp TCCHHHHHHHHHHHHHHHSCCCCCCC-----CTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCCC-----CchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHc
Confidence 46789999999999888888873210 000000112357888899999999999999999744
No 145
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=64.48 E-value=4.6 Score=34.52 Aligned_cols=18 Identities=17% Similarity=0.303 Sum_probs=16.4
Q ss_pred eEEEEcCccceEEEEEeC
Q psy2902 73 IIGIDLGTTNSCVSIIEG 90 (945)
Q Consensus 73 viGID~GTt~s~va~~~~ 90 (945)
++|||+|+..+.+|+.+.
T Consensus 3 iLglD~G~kriGvAvsd~ 20 (98)
T 1iv0_A 3 VGALDVGEARIGLAVGEE 20 (98)
T ss_dssp EEEEEESSSEEEEEEECS
T ss_pred EEEEEeCCCEEEEEEEeC
Confidence 799999999999999765
No 146
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=64.12 E-value=4 Score=47.43 Aligned_cols=20 Identities=30% Similarity=0.469 Sum_probs=17.9
Q ss_pred CceEEEEcCccceEEEEEeC
Q psy2902 71 SKIIGIDLGTTNSCVSIIEG 90 (945)
Q Consensus 71 ~~viGID~GTt~s~va~~~~ 90 (945)
.++||||+|||++++++++.
T Consensus 5 ~~~lgIDiGTts~Ka~l~d~ 24 (572)
T 3jvp_A 5 KYTIGVDYGTESGRAVLIDL 24 (572)
T ss_dssp CEEEEEEECSSEEEEEEEET
T ss_pred CEEEEEecCCcceEEEEEEC
Confidence 46899999999999999875
No 147
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=63.48 E-value=6.5 Score=35.97 Aligned_cols=22 Identities=18% Similarity=0.339 Sum_probs=18.8
Q ss_pred CceEEEEcCccceEEEEEeCCc
Q psy2902 71 SKIIGIDLGTTNSCVSIIEGSQ 92 (945)
Q Consensus 71 ~~viGID~GTt~s~va~~~~~~ 92 (945)
+.++|||+|+..+.+|+.++.+
T Consensus 3 ~~iLglD~G~kriGvAvsd~~~ 24 (138)
T 1nu0_A 3 GTLMAFDFGTKSIGVAVGQRIT 24 (138)
T ss_dssp CEEEEEECCSSEEEEEEEETTT
T ss_pred CeEEEEEeCCCEEEEEEEcCCC
Confidence 3589999999999999987643
No 148
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=62.97 E-value=13 Score=43.44 Aligned_cols=62 Identities=11% Similarity=0.176 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHh-CCCCCC---CCCCCchhhhhHHHhhhh
Q psy2902 385 RTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFF-GKDPRR---DINPDEAVAVGAAIQGSV 451 (945)
Q Consensus 385 ~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~f-g~~~~~---~~~p~~avA~GAa~~a~~ 451 (945)
.+.+.+.++.++.+ ++.|+|+||.+....+++.+.+.+ |.++.. ..-.|.++|+|.|++|+.
T Consensus 586 ~L~~~~~ra~~~~g-----~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 586 GFAALMREQATMRG-----ITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHHHHHHHTTT-----CCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC-----CCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 33344444444433 579999999999999999999988 544432 223477999999998853
No 149
>1ltl_A DNA replication initiator (CDC21/CDC54); HET: DNA; 3.00A {Methanothermobacterthermautotrophicus} SCOP: b.40.4.11
Probab=62.86 E-value=5.9 Score=41.19 Aligned_cols=16 Identities=19% Similarity=0.381 Sum_probs=0.0
Q ss_pred CCCHHHHHHHHHHHHh
Q psy2902 907 QLTEYQKKLLRSLETS 922 (945)
Q Consensus 907 ~l~~~~~~~~~~~~~~ 922 (945)
.+|+++.+.+++|.+.
T Consensus 255 ~~t~ed~~~i~~ls~~ 270 (279)
T 1ltl_A 255 QISEEDEEKIKELAGD 270 (279)
T ss_dssp ----------------
T ss_pred CCCHHHHHHHHHHhcC
Confidence 3677777777777543
No 150
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=60.84 E-value=64 Score=35.58 Aligned_cols=58 Identities=19% Similarity=0.232 Sum_probs=40.2
Q ss_pred CHHHHHHHHHHHHHcC---CccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEE
Q psy2902 216 NDAQRQATKDAGRIAG---LEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEI 277 (945)
Q Consensus 216 ~~~qr~~l~~Aa~~AG---l~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~ 277 (945)
...-.+.+++|...-| ++++.++++.+|+.++..+.. ..+.+-+=+|.||=-+.+.++
T Consensus 159 G~dv~~lL~~al~r~~~~~v~vvAivNDTvgTLla~~y~~----~~~~iglIlGTGtNa~y~e~~ 219 (445)
T 3hm8_A 159 GQDVVSLLREAITRRQAVELNVVAIVNDTVGTMMSCGYED----PRCEIGLIVGTGTNACYMEEL 219 (445)
T ss_dssp TSBHHHHHHHHHHHTTCSCCCSEEEECHHHHHHHHHHTTC----TTEEEEEEESSSEEEEEEEEG
T ss_pred CCcHHHHHHHHHHhcCCCCcceEEEecCcHHHHHhhccCC----CCceEEEEEeCCceEEEEEec
Confidence 3455778888887753 467889999999999876544 356666668888655444433
No 151
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=60.19 E-value=3.5 Score=46.90 Aligned_cols=21 Identities=19% Similarity=0.393 Sum_probs=17.8
Q ss_pred CCceEEEEcCccceEEEEEeC
Q psy2902 70 MSKIIGIDLGTTNSCVSIIEG 90 (945)
Q Consensus 70 m~~viGID~GTt~s~va~~~~ 90 (945)
|.+++|||+|||++++++++.
T Consensus 3 ~~~~lgiDiGtts~k~~l~d~ 23 (489)
T 2uyt_A 3 FRNCVAVDLGASSGRVMLARY 23 (489)
T ss_dssp CEEEEEEEECSSEEEEEEEEE
T ss_pred cceEEEEEecCCCceEEEEEe
Confidence 345899999999999999864
No 152
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=59.33 E-value=6.9 Score=42.18 Aligned_cols=19 Identities=21% Similarity=0.580 Sum_probs=17.0
Q ss_pred CceEEEEEeCCcceEEEEE
Q psy2902 257 DRNIVVYDLGGGTFDVSII 275 (945)
Q Consensus 257 ~~~vlVvD~GggT~dvsv~ 275 (945)
.++++|+|+|||++.+++.
T Consensus 139 ~~t~~v~DiGGGStei~~~ 157 (353)
T 3aap_A 139 NKSVGVMDMGGASVQIVFP 157 (353)
T ss_dssp SSCEEEEEECSSEEEEEEE
T ss_pred cccEEEEEeCCCceEEEEe
Confidence 3579999999999999987
No 153
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=57.52 E-value=16 Score=39.29 Aligned_cols=71 Identities=11% Similarity=0.123 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHhCC-CCC----CCCCCCchhhhhHHHhhhh
Q psy2902 377 LLVDELITRTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFGK-DPR----RDINPDEAVAVGAAIQGSV 451 (945)
Q Consensus 377 ~~~~~~i~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~-~~~----~~~~p~~avA~GAa~~a~~ 451 (945)
++..-+.+-+...|.+.+.... ..+.|+++||+++.|.+.++|++.+.. ++. ...+|+.-=|..-|++|..
T Consensus 267 Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aFA~LA~~ 342 (370)
T 3cqy_A 267 DIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAFAWLAMR 342 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHHHHHHHH
Confidence 4444555555666666666542 356899999999999999999999842 332 2334443333334666654
No 154
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=57.52 E-value=17 Score=43.16 Aligned_cols=51 Identities=20% Similarity=0.314 Sum_probs=39.1
Q ss_pred CCcEEEecCccccHHHHHHHHHHh---CCCCCCC---CCCCchhhhhHHHhhhhccC
Q psy2902 404 INDIILVGGMTRMPKVQEKVKEFF---GKDPRRD---INPDEAVAVGAAIQGSVLSG 454 (945)
Q Consensus 404 i~~ViLvGG~s~~p~v~~~l~~~f---g~~~~~~---~~p~~avA~GAa~~a~~~~~ 454 (945)
++.|+|+||.+....+++.|.+.+ |.++..+ .-.|-++|+|+|++|+....
T Consensus 694 ~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~~ 750 (761)
T 3vth_A 694 INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKILE 750 (761)
T ss_dssp CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHHT
T ss_pred CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHhc
Confidence 468999999999999999999887 4444321 22377999999998875443
No 155
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=57.43 E-value=1.1 Score=40.27 Aligned_cols=46 Identities=17% Similarity=0.084 Sum_probs=36.3
Q ss_pred HHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhccc
Q psy2902 599 LRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYGHA 644 (945)
Q Consensus 599 ~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~~~ 644 (945)
.+++.+++|.+++++|.+++.+..+.+.+.++++++.+|.+.+.+.
T Consensus 13 ~re~iEarN~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el 58 (120)
T 2p32_A 13 GLVPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEI 58 (120)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHH
Confidence 4567788999999999999988633367889999998888877643
No 156
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=56.31 E-value=1.8 Score=38.18 Aligned_cols=50 Identities=18% Similarity=0.179 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhcc
Q psy2902 579 EEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYGH 643 (945)
Q Consensus 579 ~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~~ 643 (945)
.++|.+..+++....++|+. . ....|..|++||++|+++.+|+.|+.++.
T Consensus 24 ~~eIk~aYr~la~~~HPDk~---------~------~~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 24 IPLMRKAYLKKCKEFHPDKG---------G------DEEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHHHHHTTTTCCTTTC---------C------TTTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred HHHHHHHHHHHHHHHCCCCC---------c------cHHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 37888888877777777761 1 13678899999999999999999987664
No 157
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=54.14 E-value=10 Score=46.63 Aligned_cols=57 Identities=14% Similarity=0.172 Sum_probs=41.0
Q ss_pred CHHHHHHHHHHHHHc-CC--ccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEE
Q psy2902 216 NDAQRQATKDAGRIA-GL--EVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIE 276 (945)
Q Consensus 216 ~~~qr~~l~~Aa~~A-Gl--~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~ 276 (945)
...-.+.+++|...- ++ .++.++++..|++++..... ..+++-+=+|.|+=-..+..
T Consensus 630 g~dv~~~L~~al~r~~~~~v~~val~NDtv~tlla~~y~~----~~~~iglIlGTG~na~y~e~ 689 (917)
T 1cza_N 630 GHDVVTLLRDAIKRREEFDLDVVAVVNDTVGTMMTCAYEE----PTCEVGLIVGTGSNACYMEE 689 (917)
T ss_dssp TSBHHHHHHHHHHHHTSCCCEEEEEECHHHHHHHHHHTTC----TTEEEEEEESSSEEEEEEEE
T ss_pred CCcHHHHHHHHHHhcCCCCceEEEEEEccHHHHHHhccCC----CCcEEEEEEeCCeeEEEEEc
Confidence 555677888887643 55 58899999999999876653 35667677898866555544
No 158
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=53.26 E-value=19 Score=41.21 Aligned_cols=78 Identities=15% Similarity=0.144 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHcCCCCCCCCcEEEecCccccHHHHHHHHHHhCC-CCCCC-CCCCchhhhhHHHh
Q psy2902 372 RAKLELLVDELIT-RTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFGK-DPRRD-INPDEAVAVGAAIQ 448 (945)
Q Consensus 372 r~~~e~~~~~~i~-~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s~~p~v~~~l~~~fg~-~~~~~-~~p~~avA~GAa~~ 448 (945)
..++-..++..+. -+.+.+..+++..+ ++.|+|+||.+....+++.+.+..+. .+..+ .-.|.++++|+|++
T Consensus 280 ~~dIAasfQ~~l~~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~ 354 (576)
T 3ven_A 280 YRDLAATAQAALERAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAA 354 (576)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHH
Confidence 4555555554433 33444555555554 47999999999999999999877554 33222 23477999999999
Q ss_pred hhhccC
Q psy2902 449 GSVLSG 454 (945)
Q Consensus 449 a~~~~~ 454 (945)
+....+
T Consensus 355 a~~~~g 360 (576)
T 3ven_A 355 VAVELG 360 (576)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 876655
No 159
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=53.13 E-value=4.3 Score=35.28 Aligned_cols=53 Identities=17% Similarity=0.116 Sum_probs=37.7
Q ss_pred CcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhH
Q psy2902 577 LTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSE 633 (945)
Q Consensus 577 ~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~ 633 (945)
.|+++|.+..+++....++|+....-. ..+....+.++|..+++||++|+|++
T Consensus 52 As~~eIKkAYRklal~~HPDK~~~~~~----~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 52 IEGNAVRKSYQRALLILHPDKLQQKGA----SANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp CSHHHHHHHHHHHHHHHCHHHHHHTTC----CHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCHHHHHHHHHHHHHHHCcCcCCCccc----chhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 689999999999999999998652100 00111123457889999999999874
No 160
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.09 E-value=2.7 Score=35.34 Aligned_cols=49 Identities=18% Similarity=0.125 Sum_probs=35.5
Q ss_pred CCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHH
Q psy2902 576 GLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRI 636 (945)
Q Consensus 576 ~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~ 636 (945)
..+.+||.+..+++....++|+.. . ..+...|..+.+||++|+++.+|.
T Consensus 38 ~as~~eIk~aYr~la~~~HPDk~~---------~---~~~~~~f~~i~~Ay~~L~d~~~R~ 86 (90)
T 2ys8_A 38 GASRDEVNKAYRKLAVLLHPDKCV---------A---PGSEDAFKAVVNARTALLKNIKSG 86 (90)
T ss_dssp TCCHHHHHHHHHHHHHHHCTTTCC---------C---TTHHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCC---------C---ccHHHHHHHHHHHHHHHCCccccc
Confidence 467788888888888878888632 1 123346888999999999987653
No 161
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=52.95 E-value=16 Score=40.79 Aligned_cols=58 Identities=17% Similarity=0.219 Sum_probs=40.7
Q ss_pred CHHHHHHHHHHHHHcC---CccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEEE
Q psy2902 216 NDAQRQATKDAGRIAG---LEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIEI 277 (945)
Q Consensus 216 ~~~qr~~l~~Aa~~AG---l~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~~ 277 (945)
...-.+.+++|...-| ++++.++++.+|..++..... +.+.+-+=+|.||=-+.+-++
T Consensus 183 G~DVv~lL~~al~r~g~~~v~v~AlvNDTVgTL~s~aY~~----~~~~iGlI~GTGtNa~Y~E~~ 243 (470)
T 3f9m_A 183 GNNVVGLLRDAIKRRGDFEMDVVAMVNDTVATMISCYYED----HQCEVGMIVGTGCNACYMEEM 243 (470)
T ss_dssp TSBHHHHHHHHHHHHCSCCCEEEEEECHHHHHHHHHHTTC----TTEEEEEEESSSEEEEEEEEG
T ss_pred CccHHHHHHHHHHhcCCCCCcEEEEEEcCHHHHHhcccCC----CCceEEEEEecCCceEEeeec
Confidence 4556788899998887 357789999999988776554 345665668888654443333
No 162
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=52.75 E-value=8 Score=39.80 Aligned_cols=22 Identities=32% Similarity=0.579 Sum_probs=18.1
Q ss_pred CCceEEEEcCccceEEEEEeCC
Q psy2902 70 MSKIIGIDLGTTNSCVSIIEGS 91 (945)
Q Consensus 70 m~~viGID~GTt~s~va~~~~~ 91 (945)
|+-+++||+|+|++++++++++
T Consensus 1 M~MlL~IDIGNT~iK~gl~d~~ 22 (266)
T 3djc_A 1 MSLILCIDVGNSHIYGGVFDGD 22 (266)
T ss_dssp --CEEEEEECSSEEEEEEEETT
T ss_pred CceEEEEEECCCeEEEEEEECC
Confidence 3348999999999999999875
No 163
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=52.37 E-value=1.7 Score=41.75 Aligned_cols=55 Identities=16% Similarity=0.230 Sum_probs=41.0
Q ss_pred CCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHHHHH
Q psy2902 576 GLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIY 638 (945)
Q Consensus 576 ~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~ 638 (945)
..+.++|.+..+++....++|+... ..+.. .+.+.|..+.+||++|+++.+|+.|
T Consensus 128 ~As~~eIKkAYRklal~~HPDK~~~-------~~~e~-~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 128 LVTPEQVKKVYRKAVLVVHPDKATG-------QPYEQ-YAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp GSSHHHHHHHHHHHHHHTCGGGGSS-------CTTHH-HHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred CCCHHHHHHHHHHHHHHHCcCcCCC-------cchHH-HHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 4689999999999999999998421 11100 1345788899999999999988654
No 164
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=51.99 E-value=2.2 Score=37.66 Aligned_cols=42 Identities=17% Similarity=0.226 Sum_probs=27.3
Q ss_pred HHHhcccCcceeeeccchhhhhhhhhccChhHHHHHHHHhcc
Q psy2902 602 LAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYGH 643 (945)
Q Consensus 602 ~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~~~~d~~~~ 643 (945)
+.+++|.+++++|.+++.+..+++.+.++++++.++.+.+.+
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~ 43 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNE 43 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHH
Confidence 456777788888877777753355667777777776665543
No 165
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=51.73 E-value=16 Score=44.94 Aligned_cols=57 Identities=18% Similarity=0.242 Sum_probs=40.7
Q ss_pred CHHHHHHHHHHHHHcC-Cc--cceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEEE
Q psy2902 216 NDAQRQATKDAGRIAG-LE--VKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSIIE 276 (945)
Q Consensus 216 ~~~qr~~l~~Aa~~AG-l~--~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~~ 276 (945)
...-++.+.++...-| ++ ++.++++..|++++-.+.. .++++.+=+|.|+=-..+..
T Consensus 182 g~~v~~~L~~~l~r~g~~pv~~val~NDa~~tll~e~~~~----~~~~iglilGTGvngg~i~~ 241 (917)
T 1cza_N 182 GADVVKLLNKAIKKRGDYDANIVAVVNDTVGTMMTCGYDD----QHCEVGLIIGTGTNACYMEE 241 (917)
T ss_dssp TSBHHHHHHHHHHHHCSCCCCEEEEECHHHHHHHHHHHHC----TTEEEEEEESSSEEEEEEEE
T ss_pred CCchHHHHHHHHhhcCCCCceEEEEEEhhHHHHHHhhccC----CCcEEEEEEECCcceEEEec
Confidence 3456777888877666 64 6899999999999776552 35677777899855544444
No 166
>3nyb_B Protein AIR2; polya RNA polymerase, zinc knuckle protein, RNA surveillance binds to TRF4P/AIR2P heterodimer; 2.70A {Saccharomyces cerevisiae}
Probab=50.38 E-value=9.5 Score=31.38 Aligned_cols=58 Identities=16% Similarity=0.246 Sum_probs=29.4
Q ss_pred cccCCCCCccccccCc--CcccCCCCCCCceEeEeeceeeeeecCCCCCCceEEeecCCcc
Q psy2902 716 WDICKSCYGNGAKKGT--SPISCFTCSGQGQVRMQQGFFSIQQTCPKCQGAGKVIPHPCLD 774 (945)
Q Consensus 716 ~~~C~~C~G~G~~~~~--~~~~C~~C~G~G~~~~~~~~~~~~~~C~~C~G~g~~~~~~c~~ 774 (945)
...|..|+..|..... ....|..|+..|.+...--.......|-.|+..|.+ -+.|..
T Consensus 5 ~~~C~~Cg~~GH~~~~Cp~~~rcY~c~~~gh~~~~c~~p~~~~~CYnCG~~GH~-~rdC~~ 64 (83)
T 3nyb_B 5 KVQCTLCKSKKHSKERCPSIWRAYILVDDNEKAKPKVLPFHTIYCYNCGGKGHF-GDDCKE 64 (83)
T ss_dssp --CCSSSCCSSSCGGGCGGGTCCCCBC-------------CCCBCSSSSCBSSC-GGGCSS
T ss_pred cCCCCCCCCCCCccccCCCcccccccccCCcccccccCCCCCCeecccCCCCcC-cccCCc
Confidence 4679999998887654 344688898887642110000123568888888863 334443
No 167
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=50.05 E-value=8.6 Score=35.71 Aligned_cols=19 Identities=37% Similarity=0.712 Sum_probs=16.8
Q ss_pred ceEEEEcCccceEEEEEeC
Q psy2902 72 KIIGIDLGTTNSCVSIIEG 90 (945)
Q Consensus 72 ~viGID~GTt~s~va~~~~ 90 (945)
.++|||+|+..+.+|+.+.
T Consensus 4 riLGiDpG~~riGvAv~d~ 22 (150)
T 1vhx_A 4 RILGLDLGTKTLGVALSDE 22 (150)
T ss_dssp EEEEEEECSSEEEEEEECT
T ss_pred EEEEEEccCCEEEEEEEEC
Confidence 3799999999999999865
No 168
>2qkd_A Zinc finger protein ZPR1; helical hairpins, beta helix, anti-parrallel beta sheet, double straded anti-parallel beta helix, metal binding protein; 2.00A {Mus musculus}
Probab=49.49 E-value=17 Score=39.50 Aligned_cols=23 Identities=13% Similarity=0.102 Sum_probs=17.7
Q ss_pred eeeeEEEEeecCCCCCeEEEEcC
Q psy2902 783 RNKTLEVKIPAGIENNMRIRSTG 805 (945)
Q Consensus 783 ~~~~l~v~ip~G~~~g~~i~~~g 805 (945)
..+.|.++||||+..|..-+++|
T Consensus 298 ~IPEL~lei~pg~~~G~~TTVEG 320 (404)
T 2qkd_A 298 EIPELEFELGMAVLGGKFTTLEG 320 (404)
T ss_dssp EEGGGTEEECTTTTCSEEEEHHH
T ss_pred EeeeeeEEecCCCCCceEEeHHH
Confidence 35667899999988887777765
No 169
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=38.01 E-value=24 Score=38.41 Aligned_cols=48 Identities=17% Similarity=0.150 Sum_probs=32.2
Q ss_pred CCCcEEEecCccccHH-HHHHHHHHhCCC--C-CC-CCCCCchhhhhHHHhhh
Q psy2902 403 DINDIILVGGMTRMPK-VQEKVKEFFGKD--P-RR-DINPDEAVAVGAAIQGS 450 (945)
Q Consensus 403 ~i~~ViLvGG~s~~p~-v~~~l~~~fg~~--~-~~-~~~p~~avA~GAa~~a~ 450 (945)
+++.|+|.||.+..+. +.+.+.+.+... + .. ......+.++|||.++.
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHc
Confidence 4689999999987644 778887777432 1 11 11222489999998774
No 170
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=36.82 E-value=37 Score=35.01 Aligned_cols=43 Identities=23% Similarity=0.254 Sum_probs=30.0
Q ss_pred cCCccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcceEEEEE
Q psy2902 230 AGLEVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGTFDVSII 275 (945)
Q Consensus 230 AGl~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT~dvsv~ 275 (945)
.|++ +.+.++..|||++.......... +++++-+|.| +-..++
T Consensus 96 ~~~p-v~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~GtG-iG~gii 138 (289)
T 2aa4_A 96 TNLP-TIAINDAQAAAWAEFQALDGDIT-DMVFITVSTG-VGGGVV 138 (289)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHTSCTTCC-CEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechHHHHHHHHHHhCCCCCc-eEEEEEeCcc-EEEEEE
Confidence 4775 67999999999976443322233 7888899988 455555
No 171
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=36.67 E-value=26 Score=39.08 Aligned_cols=20 Identities=20% Similarity=0.415 Sum_probs=17.4
Q ss_pred CceEEEEEeCCcceEEEEEE
Q psy2902 257 DRNIVVYDLGGGTFDVSIIE 276 (945)
Q Consensus 257 ~~~vlVvD~GggT~dvsv~~ 276 (945)
..+++|+|+|||++.++...
T Consensus 189 ~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 189 KGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp CCCCEEEEECSSEEEEEEEC
T ss_pred CCceEEEEcCCCceEEEecc
Confidence 45689999999999999874
No 172
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=36.56 E-value=6.5 Score=31.26 Aligned_cols=44 Identities=25% Similarity=0.238 Sum_probs=33.8
Q ss_pred CCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHH
Q psy2902 576 GLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEK 634 (945)
Q Consensus 576 ~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k 634 (945)
..|.++|.+..+++....++|+. .+...+..+++||++|+++..
T Consensus 26 ~a~~~eIk~ayr~l~~~~HPDk~---------------g~~~~f~~i~~Aye~L~~~~~ 69 (71)
T 2guz_A 26 TLTKKKLKEVHRKIMLANHPDKG---------------GSPFLATKINEAKDFLEKRGI 69 (71)
T ss_dssp TCCHHHHHHHHHHHHHHHCGGGT---------------CCHHHHHHHHHHHHHHHHHCC
T ss_pred CCCHHHHHHHHHHHHHHHCCCCC---------------CCHHHHHHHHHHHHHHhhhhh
Confidence 46788999999999988888872 122367888999999987643
No 173
>2qkd_A Zinc finger protein ZPR1; helical hairpins, beta helix, anti-parrallel beta sheet, double straded anti-parallel beta helix, metal binding protein; 2.00A {Mus musculus}
Probab=35.33 E-value=20 Score=38.94 Aligned_cols=24 Identities=25% Similarity=0.293 Sum_probs=19.1
Q ss_pred eeeeeEEEEeecCCCCCeEEEEcC
Q psy2902 782 KRNKTLEVKIPAGIENNMRIRSTG 805 (945)
Q Consensus 782 ~~~~~l~v~ip~G~~~g~~i~~~g 805 (945)
...+.|.++||||++.|..=+++|
T Consensus 89 i~IPEL~~eI~pg~~~G~iTTVEG 112 (404)
T 2qkd_A 89 TRIPELDFEIPAFSQKGALTTVEG 112 (404)
T ss_dssp EEEGGGTEEECTTSSCCEEEEHHH
T ss_pred EEeeeeeEEecCccCCceEEeHHH
Confidence 346778899999999998877755
No 174
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=35.18 E-value=5.9 Score=33.09 Aligned_cols=51 Identities=16% Similarity=0.072 Sum_probs=35.4
Q ss_pred CCCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccChhHHH
Q psy2902 575 SGLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKR 635 (945)
Q Consensus 575 ~~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~~~k~ 635 (945)
...|.+||.+..+++....++|+. ..+. -.+.+.|..|.+||++|++...+
T Consensus 26 ~~as~~eIKkaYrkla~~~HPDk~---------~~~~-~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 26 WKLPESERKKIIRRLYLKWHPDKN---------PENH-DIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp TSSCSHHHHHHHHHHHHHTCTTTS---------SSCH-HHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCC---------CCch-HHHHHHHHHHHHHHHHHHhhccc
Confidence 346778888888888888888862 1111 12345788899999999876443
No 175
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=33.96 E-value=41 Score=31.39 Aligned_cols=17 Identities=35% Similarity=0.624 Sum_probs=15.7
Q ss_pred eEEEEcCccceEEEEEe
Q psy2902 73 IIGIDLGTTNSCVSIIE 89 (945)
Q Consensus 73 viGID~GTt~s~va~~~ 89 (945)
++|||-|++++..++.+
T Consensus 3 ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 3 ILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp EEEEECCSSEEEEEEEE
T ss_pred EEEEccCCCCeeEEEEE
Confidence 79999999999999885
No 176
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=33.60 E-value=18 Score=27.57 Aligned_cols=14 Identities=29% Similarity=1.011 Sum_probs=9.6
Q ss_pred eeeeecCCCCCCce
Q psy2902 752 FSIQQTCPKCQGAG 765 (945)
Q Consensus 752 ~~~~~~C~~C~G~g 765 (945)
++....|+.|++.=
T Consensus 15 YTLk~~CP~CG~~T 28 (60)
T 2apo_B 15 YTLKEICPKCGEKT 28 (60)
T ss_dssp EESSSBCSSSCSBC
T ss_pred EeccccCcCCCCcC
Confidence 45677788887653
No 177
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=33.53 E-value=26 Score=33.05 Aligned_cols=19 Identities=26% Similarity=0.427 Sum_probs=16.5
Q ss_pred ceEEEEcCccceEEEEEeC
Q psy2902 72 KIIGIDLGTTNSCVSIIEG 90 (945)
Q Consensus 72 ~viGID~GTt~s~va~~~~ 90 (945)
.++|||-|++.+..++.+.
T Consensus 2 rILGIDPGl~~tG~gvi~~ 20 (166)
T 4ep4_A 2 VVAGIDPGITHLGLGVVAV 20 (166)
T ss_dssp EEEEEECCSSEEEEEEEEE
T ss_pred EEEEEccccCceEEEEEEe
Confidence 3799999999999998753
No 178
>2aus_D NOP10, ribosome biogenesis protein NOP10; isomerase, structural protein, isomerase-structural protein; 2.10A {Pyrococcus abyssi} PDB: 3lwr_B 3lwo_B* 3lwq_B* 3lwp_B 3lwv_B 3hax_C* 2hvy_C* 3hay_C* 2ey4_E 3hjw_B* 2rfk_B* 3hjy_B 3mqk_B
Probab=33.33 E-value=18 Score=27.46 Aligned_cols=15 Identities=33% Similarity=0.975 Sum_probs=10.5
Q ss_pred eeeeecCCCCCCceE
Q psy2902 752 FSIQQTCPKCQGAGK 766 (945)
Q Consensus 752 ~~~~~~C~~C~G~g~ 766 (945)
++....|+.|++.-.
T Consensus 14 YTLk~~CP~CG~~t~ 28 (60)
T 2aus_D 14 YTLKETCPVCGEKTK 28 (60)
T ss_dssp EESSSBCTTTCSBCE
T ss_pred EEccccCcCCCCccC
Confidence 456777888887644
No 179
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=31.93 E-value=24 Score=39.81 Aligned_cols=31 Identities=6% Similarity=-0.061 Sum_probs=25.5
Q ss_pred cEEEEcCCCCCHHHHHHHHHHHHHcCCccce
Q psy2902 206 EAVITVPAYFNDAQRQATKDAGRIAGLEVKR 236 (945)
Q Consensus 206 ~~VitVPa~~~~~qr~~l~~Aa~~AGl~~v~ 236 (945)
.++.-+|..++...-..+.+++...|+++..
T Consensus 132 ~~I~v~~~~i~~~d~a~~in~a~~~g~~i~~ 162 (607)
T 1nbw_A 132 GWIVLIDDAVDFLDAVWWLNEALDRGINVVA 162 (607)
T ss_dssp CEEEEECSSSCHHHHHHHHHHHHHTTCCEEE
T ss_pred CEEEECCCccCHHHHHHHHHHHHHcCCcEEE
Confidence 3444589999999999999999999986644
No 180
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=30.82 E-value=29 Score=28.63 Aligned_cols=23 Identities=13% Similarity=0.223 Sum_probs=21.4
Q ss_pred EEECCCCCCHHHHHHHHHHHHhh
Q psy2902 901 TIETPVQLTEYQKKLLRSLETSI 923 (945)
Q Consensus 901 ~i~~p~~l~~~~~~~~~~~~~~~ 923 (945)
.+.||..||..+|.++.++++.+
T Consensus 35 ~l~FP~sLs~~eR~~IH~lA~~~ 57 (86)
T 1msz_A 35 QLEFPPSLNSHDRLRVHQIAEEH 57 (86)
T ss_dssp EEEECTTCCSHHHHHHHHHHHHT
T ss_pred EEEcCCCCCHHHHHHHHHHHHHc
Confidence 68999999999999999999875
No 181
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=30.74 E-value=13 Score=31.34 Aligned_cols=48 Identities=17% Similarity=0.148 Sum_probs=35.1
Q ss_pred CCcHHHHHHHHHHHHHhHHHHHHHHHHHHhcccCcceeeeccchhhhhhhhhccCh
Q psy2902 576 GLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSD 631 (945)
Q Consensus 576 ~~~~~~i~~~~~~~~~~~~~d~~~~~~~~~kn~~e~~~~~~~~~~~~~~~~~~l~~ 631 (945)
..|++||.+..+++....++|+.... +.+ ..+...|..+++||++|.+
T Consensus 44 ~as~~eIKkAYRklal~~HPDK~~~~------~~~--~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 44 LVTPEQVKKVYRKAVLVVHPCKATGQ------PYE--QYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp SSSHHHHHHHHHHHHHHTCHHHHTTS------TTH--HHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCCc------hhH--hHHHHHHHHHHHHHHHHHh
Confidence 46899999999999999999985310 000 0133578899999998864
No 182
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=30.21 E-value=16 Score=38.03 Aligned_cols=46 Identities=9% Similarity=-0.017 Sum_probs=31.1
Q ss_pred CCCcEEEecCccccHHHHHHHHHHhCCCCCCCCCCCchhhhhHHHhhh
Q psy2902 403 DINDIILVGGMTRMPKVQEKVKEFFGKDPRRDINPDEAVAVGAAIQGS 450 (945)
Q Consensus 403 ~i~~ViLvGG~s~~p~v~~~l~~~fg~~~~~~~~p~~avA~GAa~~a~ 450 (945)
+.+.|+|.||.+.. +.+.+++.+..+......+..+.+.|||+++.
T Consensus 232 ~p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~~~~~a~~~GAa~la~ 277 (291)
T 1zxo_A 232 KQYPVHFIGSIAYC--YKEILQDAARQTGIQIGKILQSPMEGLIQYHS 277 (291)
T ss_dssp TTSCEEECSHHHHH--THHHHHHHTTTTTCCEEEECSCTHHHHHTTSS
T ss_pred CCceEEEECcHHHH--HHHHHHHHHhcCCcEEeecCCCHHHHHHHHHH
Confidence 46789999998876 56667776644222222345788999998874
No 183
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=28.78 E-value=35 Score=34.98 Aligned_cols=20 Identities=30% Similarity=0.612 Sum_probs=17.7
Q ss_pred eEEEEcCccceEEEEEeCCc
Q psy2902 73 IIGIDLGTTNSCVSIIEGSQ 92 (945)
Q Consensus 73 viGID~GTt~s~va~~~~~~ 92 (945)
++.||+|+|+++.++++++.
T Consensus 2 lL~IDIGNT~ik~gl~~~~~ 21 (268)
T 2h3g_X 2 IFVLDVGNTNAVLGVFEEGE 21 (268)
T ss_dssp EEEEEECSSEEEEEEEETTE
T ss_pred EEEEEECcCcEEEEEEECCE
Confidence 68999999999999998653
No 184
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=24.15 E-value=41 Score=36.32 Aligned_cols=21 Identities=14% Similarity=0.164 Sum_probs=18.6
Q ss_pred CCceEEEEcCccceEEEEEeC
Q psy2902 70 MSKIIGIDLGTTNSCVSIIEG 90 (945)
Q Consensus 70 m~~viGID~GTt~s~va~~~~ 90 (945)
|+++||||+|.|++++++++.
T Consensus 28 ~~~~lgiDiGgt~i~~~l~d~ 48 (373)
T 2q2r_A 28 APLTFVGDVGGTSARMGFVRE 48 (373)
T ss_dssp SCEEEEEEECSSEEEEEEEEE
T ss_pred CCeEEEEEEccccEEEEEEec
Confidence 567999999999999999864
No 185
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=23.59 E-value=34 Score=35.48 Aligned_cols=59 Identities=12% Similarity=0.034 Sum_probs=32.9
Q ss_pred CCcEEEEcCCCCCHHHHHHHHHHHH-HcCC-ccceecchhHHHHHHhccCCCCCCCceEEEEEeCCcc
Q psy2902 204 ITEAVITVPAYFNDAQRQATKDAGR-IAGL-EVKRIINEPTAAALAFGLDKSGKSDRNIVVYDLGGGT 269 (945)
Q Consensus 204 ~~~~VitVPa~~~~~qr~~l~~Aa~-~AGl-~~v~li~Ep~AAAl~~~~~~~~~~~~~vlVvD~GggT 269 (945)
+..+.|++|..- ......+++..+ ..++ ..+.+.++..|||++-. .....+++=+|.|.
T Consensus 58 i~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aalge~------g~~~~v~v~~GTGi 118 (291)
T 1zxo_A 58 FNAVYFYGAGCT-PEKAPVLRRAIADSLPVIGNIKANSDMLAAAHGLC------GQKAGIACILGTGS 118 (291)
T ss_dssp ---CEEECTTCC-TTTTHHHHHHHHHHSCCCSCCEEECSHHHHHHHTT------TTSCBEEEEESSSE
T ss_pred ccEEEEEcCCCC-HHHHHHHHHHHHHhcCCCceEEEECcHHHHHHhhc------CCCCcEEEEeCCCh
Confidence 445678888653 211123433333 3454 35889999999999753 12334445578876
No 186
>1msz_A DNA-binding protein smubp-2; R3H fold; NMR {Homo sapiens} SCOP: d.68.7.1
Probab=23.41 E-value=59 Score=26.75 Aligned_cols=28 Identities=18% Similarity=0.271 Sum_probs=25.4
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHcCCcc
Q psy2902 207 AVITVPAYFNDAQRQATKDAGRIAGLEV 234 (945)
Q Consensus 207 ~VitVPa~~~~~qr~~l~~Aa~~AGl~~ 234 (945)
-.++.|+.++..+|..+.+.|+..||..
T Consensus 34 ~~l~FP~sLs~~eR~~IH~lA~~~GL~h 61 (86)
T 1msz_A 34 MQLEFPPSLNSHDRLRVHQIAEEHGLRH 61 (86)
T ss_dssp SEEEECTTCCSHHHHHHHHHHHHTTEEE
T ss_pred cEEEcCCCCCHHHHHHHHHHHHHcCCCc
Confidence 4688999999999999999999999854
No 187
>2vf7_A UVRA2, excinuclease ABC, subunit A.; DNA-binding protein, nucleotide-binding, zinc-binding domain, SOS response, metal-binding; HET: ADP; 2.30A {Deinococcus radiodurans} PDB: 2vf8_A*
Probab=23.10 E-value=33 Score=41.38 Aligned_cols=32 Identities=34% Similarity=0.799 Sum_probs=19.8
Q ss_pred cCCCCCCCceEeEeecee-eeeecCCCCCCceE
Q psy2902 735 SCFTCSGQGQVRMQQGFF-SIQQTCPKCQGAGK 766 (945)
Q Consensus 735 ~C~~C~G~G~~~~~~~~~-~~~~~C~~C~G~g~ 766 (945)
.|+.|.|.|.+.....++ .+...|+.|+|+.+
T Consensus 640 ~c~~c~g~G~~~~~~~f~~~v~~~c~~c~G~r~ 672 (842)
T 2vf7_A 640 RCEHCQGEGWVMVELLFLPSVYAPCPVCHGTRY 672 (842)
T ss_dssp BCTTTTTCSEEEETTCSSSCEEEECTTTTTCCB
T ss_pred ccccccCCCccchhhhcCCccceecccccCccc
Confidence 467777777664333332 34667888888765
No 188
>2bl6_A Nucleocapsid protein P11; lentivirus, polyprotein, core protein, retrovirus zinc finger-like domains; NMR {Equine infectious anemia virus}
Probab=22.40 E-value=62 Score=21.65 Aligned_cols=27 Identities=30% Similarity=0.763 Sum_probs=13.0
Q ss_pred cCCCCCccccccCc--CcccCCCCCCCce
Q psy2902 718 ICKSCYGNGAKKGT--SPISCFTCSGQGQ 744 (945)
Q Consensus 718 ~C~~C~G~G~~~~~--~~~~C~~C~G~G~ 744 (945)
.|..|+..|..... ....|..|+..|.
T Consensus 2 ~C~~Cg~~GH~~~~C~~~~~C~~Cg~~GH 30 (37)
T 2bl6_A 2 TCYNCGKPGHLSSQCRAPKVCFKCKQPGH 30 (37)
T ss_dssp CBSSSCCSSCCTTTSSCBTTCSSCCCTTG
T ss_pred cccccCCCCcchhhCcCcCeEccCCCcCC
Confidence 36666666654332 2234555544443
No 189
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=22.27 E-value=1.3e+02 Score=31.16 Aligned_cols=48 Identities=25% Similarity=0.317 Sum_probs=31.3
Q ss_pred CCCcEEEecCcccc-----HHHHHHHHHHhCCCC-------CCCCCCCchhhhhHHHhhh
Q psy2902 403 DINDIILVGGMTRM-----PKVQEKVKEFFGKDP-------RRDINPDEAVAVGAAIQGS 450 (945)
Q Consensus 403 ~i~~ViLvGG~s~~-----p~v~~~l~~~fg~~~-------~~~~~p~~avA~GAa~~a~ 450 (945)
+.+.|+|-||.+.. +.+++.+++.+..+. ....-.+.+.++|||.++.
T Consensus 239 dP~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~lg~~ag~~GAa~la~ 298 (310)
T 3htv_A 239 DPDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASSSDFNGAQGAAILAH 298 (310)
T ss_dssp CCSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCCCTTHHHHHHHHHHH
T ss_pred CCCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 35788999988865 456777776653111 1122346789999998875
No 190
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=21.34 E-value=1.7e+02 Score=30.22 Aligned_cols=19 Identities=21% Similarity=0.267 Sum_probs=17.1
Q ss_pred eEEEEcCccceEEEEEeCC
Q psy2902 73 IIGIDLGTTNSCVSIIEGS 91 (945)
Q Consensus 73 viGID~GTt~s~va~~~~~ 91 (945)
++|||+|.|++++++++..
T Consensus 5 ~lgiDiGgt~i~~~l~d~~ 23 (302)
T 3epq_A 5 LGGIEAGGTXFVCAVGRED 23 (302)
T ss_dssp EEEEEECSSEEEEEEECTT
T ss_pred EEEEEECcceeEEEEEECC
Confidence 8999999999999998754
No 191
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=21.33 E-value=90 Score=33.70 Aligned_cols=22 Identities=36% Similarity=0.560 Sum_probs=19.4
Q ss_pred CCceEEEEcCccceEEEEEeCC
Q psy2902 70 MSKIIGIDLGTTNSCVSIIEGS 91 (945)
Q Consensus 70 m~~viGID~GTt~s~va~~~~~ 91 (945)
|++++|||+|.|++++++++.+
T Consensus 1 m~~vlgidiGgt~ik~al~d~~ 22 (381)
T 1saz_A 1 MFRILTINPGSTSTKLSIFEDE 22 (381)
T ss_dssp CCEEEEEEECSSEEEEEEEETT
T ss_pred CCeEEEEECCccceeEEEEecc
Confidence 5668999999999999999865
No 192
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=21.32 E-value=60 Score=24.96 Aligned_cols=25 Identities=20% Similarity=0.364 Sum_probs=11.7
Q ss_pred ccccccccceeeEeeccccccCCCC
Q psy2902 698 ITLEQAAYGFNTSIRVPSWDICKSC 722 (945)
Q Consensus 698 ~~~~~~~~g~~~~~~~~~~~~C~~C 722 (945)
+.|.++-||.+..+.......|+.|
T Consensus 20 v~Y~C~~Cg~~~~l~~~~~iRC~~C 44 (63)
T 3h0g_L 20 MIYLCADCGARNTIQAKEVIRCREC 44 (63)
T ss_dssp CCCBCSSSCCBCCCCSSSCCCCSSS
T ss_pred eEEECCCCCCeeecCCCCceECCCC
Confidence 4455555555555443333333333
Done!