RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2902
(945 letters)
>d1dkgd2 c.55.1.1 (D:186-383) Heat shock protein 70kDa, ATPase
fragment {Escherichia coli, gene dnaK [TaxId: 562]}
Length = 198
Score = 267 bits (685), Expect = 2e-84
Identities = 129/197 (65%), Positives = 168/197 (85%)
Query: 257 DRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRIIDYILDEFNK 316
+R I VYDLGGGTFD+SIIEI +VDGEK FEVL+TNGDT LGGEDFD R+I+Y+++EF K
Sbjct: 2 NRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKK 61
Query: 317 INGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSNGAPVHLNLKITRAKLE 376
GIDLR D +A+QR+K +AE+AKIELSS++QT++N PYI P H+N+K+TRAKLE
Sbjct: 62 DQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKLE 121
Query: 377 LLVDELITRTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRDIN 436
LV++L+ R+IE ++A++DAG+ VSDI+D+ILVGG TRMP VQ+KV EFFGK+PR+D+N
Sbjct: 122 SLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVN 181
Query: 437 PDEAVAVGAAIQGSVLS 453
PDEAVA+GAA+QG VL+
Sbjct: 182 PDEAVAIGAAVQGGVLT 198
>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase
fragment {Escherichia coli, gene dnaK [TaxId: 562]}
Length = 183
Score = 265 bits (679), Expect = 6e-84
Identities = 142/181 (78%), Positives = 170/181 (93%)
Query: 72 KIIGIDLGTTNSCVSIIEGSQPKVIENSEGARTTPSVIAYQENGEILVGAPAKRQAVTNP 131
KIIGIDLGTTNSCV+I++G+ P+V+EN+EG RTTPS+IAY ++GE LVG PAKRQAVTNP
Sbjct: 1 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNP 60
Query: 132 KNTIYAAKRLIGRKFNEKEVQKDISLMPYKIVKADNGDAWISVRGKKLAPPQISAEVLRK 191
+NT++A KRLIGR+F ++EVQ+D+S+MP+KI+ ADNGDAW+ V+G+K+APPQISAEVL+K
Sbjct: 61 QNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKK 120
Query: 192 MKKTAEDYLGGEITEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAFGLD 251
MKKTAEDYLG +TEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALA+GLD
Sbjct: 121 MKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLD 180
Query: 252 K 252
K
Sbjct: 181 K 181
>d1bupa1 c.55.1.1 (A:4-188) Heat shock protein 70kDa, ATPase
fragment {Cow (Bos taurus) [TaxId: 9913]}
Length = 185
Score = 233 bits (596), Expect = 4e-72
Identities = 97/185 (52%), Positives = 127/185 (68%), Gaps = 6/185 (3%)
Query: 72 KIIGIDLGTTNSCVSIIEGSQPKVIENSEGARTTPSVIAYQENGEILVGAPAKRQAVTNP 131
+GIDLG+T SCV + + + ++I N +G RTTPS +A+ + E L+G AK Q NP
Sbjct: 2 PAVGIDLGSTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAMNP 60
Query: 132 KNTIYAAKRLIGRKFNEKEVQKDISLMPYKIVKADNGDAWISVR----GKKLAPPQISAE 187
NT++ AKRLIGR+F++ VQ D+ P+ +V D G + V K P ++S+
Sbjct: 61 TNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVN-DAGRPKVQVEYKGETKSFYPEEVSSM 119
Query: 188 VLRKMKKTAEDYLGGEITEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALA 247
VL KMK+ AE YLG +T AV+TVPAYFND+QRQATKDAG IAGL V RIINEPTAAA+A
Sbjct: 120 VLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIA 179
Query: 248 FGLDK 252
+GLDK
Sbjct: 180 YGLDK 184
>d1bupa2 c.55.1.1 (A:189-381) Heat shock protein 70kDa, ATPase
fragment {Cow (Bos taurus) [TaxId: 9913]}
Length = 193
Score = 231 bits (591), Expect = 4e-71
Identities = 89/199 (44%), Positives = 133/199 (66%), Gaps = 9/199 (4%)
Query: 256 SDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRIIDYILDEFN 315
++RN++++DLGGGTFDVSI+ I D FEV ST GDT LGGEDFD R++++ + EF
Sbjct: 3 AERNVLIFDLGGGTFDVSILTIED----GIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFK 58
Query: 316 KINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSNGAPVHLNLKITRAKL 375
+ + D+ ++ A++R++ + ERAK LSSS Q I + + ITRA+
Sbjct: 59 RKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYE----GIDFYTSITRARF 114
Query: 376 ELLVDELITRTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFF-GKDPRRD 434
E L +L T++P A++DA + S I+DI+LVGG TR+PK+Q+ +++FF GK+ +
Sbjct: 115 EELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKS 174
Query: 435 INPDEAVAVGAAIQGSVLS 453
INPDEAVA GAA+Q ++LS
Sbjct: 175 INPDEAVAYGAAVQAAILS 193
>d1yuwa1 b.130.1.1 (A:385-543) DnaK {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 159
Score = 214 bits (545), Expect = 3e-65
Identities = 99/159 (62%), Positives = 124/159 (77%), Gaps = 1/159 (0%)
Query: 453 SGDRKDLLLLDVTPLSLGIETMGGIMTKMIKKNTTIPTKFSQVFSTAEDNQPAVTVKVYQ 512
S + +DLLLLDVTPLSLGIET GG+MT +IK+NTTIPTK +Q F+T DNQP V ++VY+
Sbjct: 1 SENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYE 60
Query: 513 GEREMVSGNKILGEFNLEGIPPALRGIPQIEVTFDIDANGILHVTAKDKKTGKENKITIK 572
GER M N +LG+F L GIPPA RG+PQIEVTFDIDANGIL+V+A DK TGKENKITI
Sbjct: 61 GERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITIT 120
Query: 573 ANSG-LTEEEIKKMVQSAEANAEEDKRLRELAESRNHGE 610
+ G L++E+I++MVQ AE ED++ R+ S+N E
Sbjct: 121 NDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLE 159
>d1dkza2 b.130.1.1 (A:389-506) DnaK {Escherichia coli [TaxId: 562]}
Length = 118
Score = 175 bits (445), Expect = 5e-52
Identities = 90/117 (76%), Positives = 103/117 (88%)
Query: 460 LLLDVTPLSLGIETMGGIMTKMIKKNTTIPTKFSQVFSTAEDNQPAVTVKVYQGEREMVS 519
LLLDVTPLSLGIETMGG+MT +I KNTTIPTK SQVFSTAEDNQ AV++ V QGER+ +
Sbjct: 2 LLLDVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVSIHVLQGERKRAA 61
Query: 520 GNKILGEFNLEGIPPALRGIPQIEVTFDIDANGILHVTAKDKKTGKENKITIKANSG 576
NK LG+FNL+GI PA RG+PQIEVTFDIDA+GILHV+AKDK +GKE KITIKA+SG
Sbjct: 62 DNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSG 118
>d1u00a2 b.130.1.1 (A:389-503) Chaperone protein hscA (Hsc66)
{Escherichia coli [TaxId: 562]}
Length = 115
Score = 159 bits (403), Expect = 2e-46
Identities = 57/115 (49%), Positives = 77/115 (66%)
Query: 462 LDVTPLSLGIETMGGIMTKMIKKNTTIPTKFSQVFSTAEDNQPAVTVKVYQGEREMVSGN 521
+DV PLSLG+ETMGG++ K+I +NTTIP +Q F+T +D Q A+++ V QGERE+V
Sbjct: 1 MDVIPLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDC 60
Query: 522 KILGEFNLEGIPPALRGIPQIEVTFDIDANGILHVTAKDKKTGKENKITIKANSG 576
+ L F L GIP G I VTF +DA+G+L VTA +K TG E I +K + G
Sbjct: 61 RSLARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYG 115
>d1jcea1 c.55.1.1 (A:4-140) Prokaryotic actin homolog MreB
{Thermotoga maritima [TaxId: 2336]}
Length = 137
Score = 112 bits (282), Expect = 9e-30
Identities = 45/181 (24%), Positives = 63/181 (34%), Gaps = 45/181 (24%)
Query: 72 KIIGIDLGTTNSCVSIIEGSQPKVIENSEGARTTPSVIAYQEN-GEILVGAPAKRQAVTN 130
K IGIDLGT N+ V + ++ N PSVIA GEIL + +
Sbjct: 1 KDIGIDLGTANTLVFLRGK---GIVVNE------PSVIAIDSTTGEILKVGLEAKNMIGK 51
Query: 131 PKNTIYAAKRLIGRKFNEKEVQKDISLMPYKIVKADNGDAWISVRGKKLAPPQISAEVLR 190
TI A + + ++ +LR
Sbjct: 52 TPATIKAIRPMRDGVIA---------------------------------DYTVALVMLR 78
Query: 191 KMKKTAEDYLGGEITEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAFGL 250
A+ + VI VP D +R+A DAG AG +I EP AAA+ G
Sbjct: 79 YFINKAKGGMNLFKPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAI--GS 136
Query: 251 D 251
+
Sbjct: 137 N 137
>d1jcea2 c.55.1.1 (A:141-336) Prokaryotic actin homolog MreB
{Thermotoga maritima [TaxId: 2336]}
Length = 196
Score = 113 bits (282), Expect = 4e-29
Identities = 30/194 (15%), Positives = 69/194 (35%), Gaps = 21/194 (10%)
Query: 257 DRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRIIDYILDEFNK 316
+V D+GGGT +V++I + + T + G++ D+ I+ Y+ + +
Sbjct: 6 PSGNMVVDIGGGTTEVAVISLGSIV---------TWESIRIAGDEMDEAIVQYVRETYRV 56
Query: 317 INGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSNGAPVHLNLKITRAKLE 376
G + ++ E+ + + L + ++
Sbjct: 57 AIGERTAERVKIEIGNVFPSKEND---------ELETTVSGIDLSTGLPRKLTLKGGEVR 107
Query: 377 LLVDELITRTIEPCRIAIKDAGIKVS---DINDIILVGGMTRMPKVQEKVKEFFGKDPRR 433
+ ++ +E R ++ ++ I L GG + + + +++ G R
Sbjct: 108 EALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIR 167
Query: 434 DINPDEAVAVGAAI 447
P AVA GA +
Sbjct: 168 SEEPLTAVAKGAGM 181
>d2zgya2 c.55.1.1 (A:158-320) Plasmid segregation protein ParM
{Escherichia coli [TaxId: 562]}
Length = 163
Score = 104 bits (259), Expect = 2e-26
Identities = 28/199 (14%), Positives = 59/199 (29%), Gaps = 42/199 (21%)
Query: 255 KSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRIIDYILDEF 314
++++ DLGG T D+S + K + GD+ LG + D +
Sbjct: 4 DELDSLLIIDLGGTTLDISQVM------GKLSGISKIYGDSSLGVSLVTSAVKDALSLAR 57
Query: 315 NKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSNGAPVHLNLKITRAK 374
K + I + +L +I
Sbjct: 58 TK-------------------------------GSSYLADDIIIHRKDNNYLKQRINDEN 86
Query: 375 LELLVDELITRTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRD 434
+V E + + + + + S ++++GG + + + VK+ R
Sbjct: 87 KISIVTEAMNEALRKLEQRVLNTLNEFSGYTHVMVIGGGAEL--ICDAVKKHTQIRDERF 144
Query: 435 I---NPDEAVAVGAAIQGS 450
N + G + G+
Sbjct: 145 FKTNNSQYDLVNGMYLIGN 163
>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein
DnaJ {Escherichia coli [TaxId: 562]}
Length = 79
Score = 92.9 bits (230), Expect = 1e-23
Identities = 42/79 (53%), Positives = 57/79 (72%)
Query: 706 GFNTSIRVPSWDICKSCYGNGAKKGTSPISCFTCSGQGQVRMQQGFFSIQQTCPKCQGAG 765
G IR+P+ + C C+G+GAK GT P +C TC G GQV+M+QGFF++QQTCP CQG G
Sbjct: 1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRG 60
Query: 766 KVIPHPCLDCNGIGRIKRN 784
+I PC C+G GR++R+
Sbjct: 61 TLIKDPCNKCHGHGRVERS 79
>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate
reductase), N-terminal domain {Shewanella oneidensis
[TaxId: 70863]}
Length = 90
Score = 80.2 bits (197), Expect = 6e-19
Identities = 13/71 (18%), Positives = 20/71 (28%), Gaps = 7/71 (9%)
Query: 719 CKSCYGNG---AKKGTSPISCFTCSGQGQVRMQQ----GFFSIQQTCPKCQGAGKVIPHP 771
C+SC+ +G A C +C G+ + C
Sbjct: 14 CESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGNLVCADCHAVHDMNVGQKPT 73
Query: 772 CLDCNGIGRIK 782
C C+ GR
Sbjct: 74 CESCHDDGRTS 84
>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein
mas5 (Hsp40, Ydj1), insert domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 74
Score = 79.0 bits (194), Expect = 9e-19
Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 7/71 (9%)
Query: 718 ICKSCYGNGAKKGTSPISCFTCSGQGQVRMQQ----GFFSIQQTCPKCQGAGKVIP--HP 771
+CK C G G KKG C +C+GQG + + Q C C G G +I
Sbjct: 4 LCKECEGRGGKKGAVK-KCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIIDPKDR 62
Query: 772 CLDCNGIGRIK 782
C CNG
Sbjct: 63 CKSCNGKKVEN 73
Score = 28.1 bits (62), Expect = 0.85
Identities = 11/32 (34%), Positives = 13/32 (40%), Gaps = 2/32 (6%)
Query: 755 QQTCPKCQGAG--KVIPHPCLDCNGIGRIKRN 784
Q C +C+G G K C CNG G
Sbjct: 2 QILCKECEGRGGKKGAVKKCTSCNGQGIKFVT 33
>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 90
Score = 78.5 bits (193), Expect = 3e-18
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 831 FERDGDDLHYEMPISFSTAALGGEIEAPTLNGKAF-FVIPEGTQSGKIFRLRGKGIKNIR 889
F+RDGDDL Y +P+SF + LG T++G+ + Q + G+G+ +
Sbjct: 2 FKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPK 61
Query: 890 -SSIPGDLFCHVTIETPVQLTEYQKKLL 916
S G+L ++ P+ L + QK+ +
Sbjct: 62 NPSQRGNLIVKYKVDYPISLNDAQKRAI 89
Score = 29.1 bits (65), Expect = 0.51
Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 4/64 (6%)
Query: 688 NGKDLRYNLEITLEQAAYGFNTSIRVPSWDICKSCYGNGAKKGTSPISCFTCSGQGQVRM 747
+G DL Y L ++ +++ GF+ +I+ + P T GQG
Sbjct: 5 DGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSR----VQPVQPSQTSTYPGQGMPTP 60
Query: 748 QQGF 751
+
Sbjct: 61 KNPS 64
>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein
mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 80
Score = 77.7 bits (191), Expect = 4e-18
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
Query: 831 FERDGDDLHYEMPISFSTAALGGEIEAPTLNGKAFFV---IPEGTQSGKIFRLRGKGIKN 887
F+RDGDDL YE I TA GGE ++G V E G + GKG+
Sbjct: 2 FKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPI 61
Query: 888 IRSSIPGDLFCHVTIETP 905
+ G+L TI+ P
Sbjct: 62 PKYGGYGNLIIKFTIKDP 79
Score = 33.0 bits (75), Expect = 0.023
Identities = 13/39 (33%), Positives = 15/39 (38%)
Query: 788 EVKIPAGIENNMRIRSTGNGEPGLNGGSNGNLYIEIHIK 826
+ I MR G G P G GNL I+ IK
Sbjct: 39 GIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIK 77
Score = 31.8 bits (72), Expect = 0.045
Identities = 14/63 (22%), Positives = 20/63 (31%), Gaps = 2/63 (3%)
Query: 688 NGKDLRYNLEITLEQAAYGFNTSIRVPSWDICKSCYGNGAKKGTSPISCFTCSGQGQVRM 747
+G DL Y EI L A G + G + +P G+G
Sbjct: 5 DGDDLVYEAEIDLLTAIAGG--EFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIP 62
Query: 748 QQG 750
+ G
Sbjct: 63 KYG 65
>d2fsja1 c.55.1.12 (A:165-325) Hypothetical protein Ta0583 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 161
Score = 72.5 bits (177), Expect = 2e-15
Identities = 29/192 (15%), Positives = 61/192 (31%), Gaps = 43/192 (22%)
Query: 255 KSDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRIIDYILDEF 314
+ VV D+G T DV I + D++ V+ + +G D + I E
Sbjct: 3 QQPGYGVVIDVGSRTTDVLTINLMDME-----PVVELSFSLQIGVGDAISALSRKIAKET 57
Query: 315 NKINGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSNGAPVHLNLKITRAK 374
+ DL ++ + ++ +++
Sbjct: 58 GFVVPFDLAQE---ALSHPVMFRQKQVGGP------------------------EVSGPI 90
Query: 375 LELLVDELITRTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRD 434
LE L + +I R + + +I VGG + + + ++ +E +
Sbjct: 91 LEDLANRIIENIRLNLRGEVD-------RVTSLIPVGGGSNL--IGDRFEEIAPGTLVKI 141
Query: 435 I--NPDEAVAVG 444
+ A A+G
Sbjct: 142 KPEDLQFANALG 153
>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 80
Score = 67.6 bits (165), Expect = 1e-14
Identities = 11/68 (16%), Positives = 20/68 (29%), Gaps = 3/68 (4%)
Query: 761 CQGAGKVIPHPCLDCNGIGRIKRNKTLEVKIPAGIENNMRIRSTGNGEPGLNGGSNGNLY 820
G K +G +++++ G + +I G+ G L
Sbjct: 15 FVGKKKSFKIGRKGPHGASE---KTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQ 71
Query: 821 IEIHIKPH 828
I K H
Sbjct: 72 FVIQEKSH 79
Score = 38.7 bits (90), Expect = 2e-04
Identities = 9/77 (11%), Positives = 26/77 (33%), Gaps = 9/77 (11%)
Query: 836 DDLHYEMPISFSTAALGGEIE------APTLNGKAFFV---IPEGTQSGKIFRLRGKGIK 886
+ + +P+S +G + P + + + G ++G + +G
Sbjct: 1 ETVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPGWKAGTKITYKNQGDY 60
Query: 887 NIRSSIPGDLFCHVTIE 903
N ++ L + +
Sbjct: 61 NPQTGRRKTLQFVIQEK 77
>d1dkza1 a.8.4.1 (A:507-603) DnaK {Escherichia coli [TaxId: 562]}
Length = 97
Score = 66.7 bits (163), Expect = 4e-14
Identities = 29/61 (47%), Positives = 43/61 (70%), Gaps = 2/61 (3%)
Query: 577 LTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRI 636
L E+EI+KMV+ AEANAE D++ EL ++RN G+ L+HST+K + +EA + L +K
Sbjct: 1 LNEDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQV--EEAGDKLPADDKTA 58
Query: 637 I 637
I
Sbjct: 59 I 59
>d1u00a1 a.8.4.1 (A:504-615) Chaperone protein hscA (Hsc66)
{Escherichia coli [TaxId: 562]}
Length = 112
Score = 58.4 bits (141), Expect = 4e-11
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Query: 577 LTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRI 636
LT+ EI M++ + + AE+D + R LAE + ++ S +L +LS +E+++
Sbjct: 1 LTDSEIASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGAL--AADAALLSAAERQV 58
Query: 637 I 637
I
Sbjct: 59 I 59
>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import
protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 74
Score = 50.9 bits (121), Expect = 1e-08
Identities = 13/71 (18%), Positives = 26/71 (36%), Gaps = 1/71 (1%)
Query: 833 RDGDDLHYEMPISFSTAALGGEIEAPTLNGKAFFVIPEGTQSGKIFRLRGKGIKNIRSSI 892
+ G D+ +E+ S G + + G + G+ +G+ + I
Sbjct: 2 QRGKDIKHEISASLEELYKGRTAKLALNRKILEVHVEPGMKDGQRIVFKGEADQA-PDVI 60
Query: 893 PGDLFCHVTIE 903
PGD+ V+
Sbjct: 61 PGDVVFIVSER 71
Score = 43.9 bits (103), Expect = 2e-06
Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Query: 772 CLDCNGIGRIKRNKTLEVKIPAGIENNMRIRSTGNGEPGLNGGSNGNLYIEIHIKPHK 829
K LEV + G+++ RI G + + G++ + +PHK
Sbjct: 18 LYKGRTAKLALNRKILEVHVEPGMKDGQRIVFKGEADQAPDVI-PGDVVFIVSERPHK 74
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain
{Escherichia coli [TaxId: 562]}
Length = 75
Score = 47.3 bits (112), Expect = 1e-07
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 11/70 (15%)
Query: 578 TEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRII 637
E EI+K + D+ N G+ + K +IKEAYEVL+DS+KR
Sbjct: 16 EEREIRKAYKRLAMKYHPDR---------NQGDK--EAEAKFKEIKEAYEVLTDSQKRAA 64
Query: 638 YDQYGHAGID 647
YDQYGHA +
Sbjct: 65 YDQYGHAAFE 74
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}
Length = 77
Score = 46.3 bits (109), Expect = 4e-07
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 12/72 (16%)
Query: 578 TEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRII 637
++EEIK+ + ++ +N + +K +I EAY+VLSD KR I
Sbjct: 16 SDEEIKRAYR---------RQALRYHPDKNKEP---GAEEKFKEIAEAYDVLSDPRKREI 63
Query: 638 YDQYGHAGIDPN 649
+D+YG G+ +
Sbjct: 64 FDRYGEEGLKGS 75
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3
(J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 94
Score = 42.0 bits (98), Expect = 2e-05
Identities = 11/66 (16%), Positives = 27/66 (40%), Gaps = 5/66 (7%)
Query: 578 TEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRII 637
++K+ Q DK+ + ++ +K ++I +A+++L + E +
Sbjct: 29 NMSDLKQKYQKLILLYHPDKQ-----SADVPAGTMEECMQKFIEIDQAWKILGNEETKKK 83
Query: 638 YDQYGH 643
YD
Sbjct: 84 YDLQRS 89
>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain
{Simian virus 40, Sv40 [TaxId: 10633]}
Length = 114
Score = 41.7 bits (97), Expect = 4e-05
Identities = 11/95 (11%), Positives = 28/95 (29%), Gaps = 6/95 (6%)
Query: 587 QSAEANAEEDKR-LRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRIIYDQYGHAG 645
+SA N ++ + + +K K+ Y+ + D K +G
Sbjct: 18 RSAWGNIPLMRKAYLKKC--KEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAHQPDFGGFW 75
Query: 646 IDPNMSGSSASAEASNFADA-FGDIFG--DIFGSN 677
+ + ++F ++ S+
Sbjct: 76 DATEIPTYGTDEWEQWWNAFNEENLFCSEEMPSSD 110
>d1e4ft2 c.55.1.1 (T:200-390) Cell division protein FtsA {Thermotoga
maritima [TaxId: 2336]}
Length = 191
Score = 42.6 bits (99), Expect = 7e-05
Identities = 24/188 (12%), Positives = 53/188 (28%), Gaps = 23/188 (12%)
Query: 257 DRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRIIDYILDEFNK 316
DR +VV +LG + + +G +G + + + + F +
Sbjct: 6 DRGVVVVNLGYNFTGLIAYK----NGVPIK-----ISYVPVGMKHVIKDVSAVLDTSFEE 56
Query: 317 INGIDLRKDSIALQRIKASAERAKIELSSSKQTEINEPYIAMSNGAPVHLNLKITRAKLE 376
+R+ + A ++ + I A+L
Sbjct: 57 S------------ERLIITHGNAVYNDLKEEEIQYRGLDGNTIKTTTAKKLSVIIHARLR 104
Query: 377 LLVDELITRTIEPCRIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRDIN 436
++ + I + G ++L GG ++P++ E E F R
Sbjct: 105 EIM-SKSKKFFREVEAKIVEEGEI-GIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCY 162
Query: 437 PDEAVAVG 444
+
Sbjct: 163 ANSDRPSI 170
>d1qo8a1 a.138.1.3 (A:2-102) Flavocytochrome c3 (respiratory
fumarate reductase), N-terminal domain {Shewanella
frigidimarina [TaxId: 56812]}
Length = 101
Score = 40.2 bits (93), Expect = 1e-04
Identities = 11/68 (16%), Positives = 18/68 (26%), Gaps = 11/68 (16%)
Query: 719 CKSCYGNGAK----KGTSPISCFTCSGQGQVRMQQGFF-------SIQQTCPKCQGAGKV 767
C+SC+ K + C +C G+ C C +
Sbjct: 14 CQSCHAKPIKVTDSETHENAQCKSCHGEYAELANDKLQFDPHNSHLGDINCTSCHKGHEE 73
Query: 768 IPHPCLDC 775
C +C
Sbjct: 74 PKFYCNEC 81
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain
{Murine polyomavirus [TaxId: 10634]}
Length = 79
Score = 37.7 bits (87), Expect = 4e-04
Identities = 2/72 (2%), Positives = 14/72 (19%), Gaps = 15/72 (20%)
Query: 571 IKANSGLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLS 630
+ +++ ++ + S ++ +
Sbjct: 19 LPRQLWGDFGRMQQ-------------AYKQQS--LLLHPDKGGSHALMQELNSLWGTFK 63
Query: 631 DSEKRIIYDQYG 642
+ + G
Sbjct: 64 TEVYNLRMNLGG 75
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId:
9913]}
Length = 98
Score = 36.8 bits (85), Expect = 0.001
Identities = 7/61 (11%), Positives = 21/61 (34%), Gaps = 8/61 (13%)
Query: 578 TEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRII 637
T E++KK L + ++ +++ +A+ + ++ +
Sbjct: 46 TPEQVKK--------VYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPL 97
Query: 638 Y 638
Y
Sbjct: 98 Y 98
>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 88
Score = 36.2 bits (83), Expect = 0.002
Identities = 13/69 (18%), Positives = 23/69 (33%), Gaps = 13/69 (18%)
Query: 577 LTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLSDSEKRI 636
L E E KK++ +RL + E+ + + ++ L EK+
Sbjct: 28 LPESERKKII----------RRLYLKWHPDKNPENHDIANEVFKHLQNEINRL---EKQA 74
Query: 637 IYDQYGHAG 645
DQ
Sbjct: 75 FLDQNADRA 83
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain
{Escherichia coli [TaxId: 562]}
Length = 76
Score = 35.0 bits (80), Expect = 0.004
Identities = 11/69 (15%), Positives = 23/69 (33%), Gaps = 6/69 (8%)
Query: 571 IKANSGLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHSTKKSLKIKEAYEVLS 630
+ A L + + Q + DK + + + ++S I +A++ L
Sbjct: 9 LPARYQLDTQALSLRFQDLQRQYHPDKF------ASGSQAEQLAAVQQSATINQAWQTLR 62
Query: 631 DSEKRIIYD 639
R Y
Sbjct: 63 HPLMRAEYL 71
>d1huxa_ c.55.1.5 (A:) Hydroxyglutaryl-CoA dehydratase component A
{Acidaminococcus fermentans [TaxId: 905]}
Length = 259
Score = 36.4 bits (83), Expect = 0.012
Identities = 24/179 (13%), Positives = 56/179 (31%), Gaps = 20/179 (11%)
Query: 271 DVSIIEIADVDGEKQFEVLSTNGDTFLGGEDFDQRIIDYILDEFNKINGIDLRKDSIALQ 330
+V + K V + F + + LD I + +
Sbjct: 95 NVHTVIDIGGQDVKVIHVENGTMTNFQMNDKCAAGTGRF-LDVMANILEVKVS------- 146
Query: 331 RIKASAERAKIELSSSKQTEINEPYIAMSNGAPVHLNLKITRAKLELLVDELITRTIEPC 390
+ A++ S+K+ I+ + + K ++I
Sbjct: 147 ------DLAELGAKSTKRVAISSTCTVFAESEVISQLSK------GTDKIDIIAGIHRSV 194
Query: 391 RIAIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRDINPDEAVAVGAAIQG 449
+ +V + D+++ GG+ + V+ ++E G + + A+GAA+
Sbjct: 195 ASRVIGLANRVGIVKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYA 253
>d1bqba_ d.92.1.2 (A:) Aureolysin {Staphylococcus aureus [TaxId:
1280]}
Length = 301
Score = 33.4 bits (76), Expect = 0.11
Identities = 11/62 (17%), Positives = 21/62 (33%), Gaps = 4/62 (6%)
Query: 636 IIYDQYGHAGIDPNMSGSSASAEASNFADAFGDIFGDIFGSNR---DRDNNNKGSNGKDL 692
++ + H G+ + ++ ++F D+FG D G G L
Sbjct: 141 VVAHEITH-GVTQQTANLEYKDQSGALNESFSDVFGYFVDDEDFLMGEDVYTPGKEGDAL 199
Query: 693 RY 694
R
Sbjct: 200 RS 201
>d1oy2a_ b.55.1.2 (A:) Shc adaptor protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 191
Score = 32.3 bits (73), Expect = 0.14
Identities = 7/65 (10%), Positives = 23/65 (35%)
Query: 5 KKIKQSKSKVKKKIKQSKVKKKIKQSKVKKKIKQPLICKTLIFELKLNLKILDEDLKRIL 64
+ ++ K ++ K + S + + + + +L ++ D K+I+
Sbjct: 67 SLVCEAVPGAKGATRRRKPCSRPLSSILGRSNLKFAGMPITLTVSTSSLNLMAADCKQII 126
Query: 65 HARRI 69
+
Sbjct: 127 ANHHM 131
>d1moxa3 g.3.9.1 (A:163-311) EGF receptor Cys-rich domains {Human
(Homo sapiens) [TaxId: 9606]}
Length = 149
Score = 31.6 bits (70), Expect = 0.20
Identities = 12/64 (18%), Positives = 16/64 (25%), Gaps = 9/64 (14%)
Query: 719 CKSCYGNGAKKGTSPISCFTCSG---QGQVRMQQGFFSIQQTCPKCQGAGKVIPHP--CL 773
C + G +C + Q + S C AG P CL
Sbjct: 8 CPNGSCWG----AGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCL 63
Query: 774 DCNG 777
C
Sbjct: 64 VCRK 67
>d2joya1 b.34.5.7 (A:1-96) Ribosomal protein L14e {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 96
Score = 27.7 bits (62), Expect = 2.2
Identities = 12/40 (30%), Positives = 24/40 (60%), Gaps = 3/40 (7%)
Query: 2 KVKKKIKQSKSKVKKKIKQSKVKKKIKQSKVKKKIKQPLI 41
K+ + S +VKKK+++S + + +K+ K KI+ P +
Sbjct: 60 KIDIQKGASDEEVKKKLEESNLTEYMKE---KIKIRMPTL 96
>d1ve5a1 c.79.1.1 (A:2-311) Threonine deaminase {Thermus
thermophilus [TaxId: 274]}
Length = 310
Score = 29.2 bits (64), Expect = 2.4
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 236 RIINEPT-AAALAFGLDKSGKSDRNIVVYDLGGGTFDVS 273
+ + EPT A LA L+ + + + + L GG D S
Sbjct: 272 KQVVEPTGALPLAAVLEHGARLPQTLALL-LSGGNRDFS 309
>d1kjpa_ d.92.1.2 (A:) Thermolysin {Bacillus thermoproteolyticus
[TaxId: 1427]}
Length = 316
Score = 28.8 bits (64), Expect = 2.7
Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 9/67 (13%)
Query: 636 IIYDQYGHAGIDPNMSGSSASAEASNFADAFGDIFGDIFGSNRDRDNN--------NKGS 687
++ + H + +G E+ +A DIFG + +++ + G
Sbjct: 139 VVAHELTH-AVTDYTAGLIYQNESGAINEAISDIFGTLVEFYANKNPDWEIGEDVYTPGI 197
Query: 688 NGKDLRY 694
+G LR
Sbjct: 198 SGDSLRS 204
>d1zc6a1 c.55.1.5 (A:8-121) Probable N-acetylglucosamine kinase
CV2896 {Chromobacterium violaceum [TaxId: 536]}
Length = 114
Score = 27.7 bits (61), Expect = 3.1
Identities = 5/19 (26%), Positives = 11/19 (57%)
Query: 70 MSKIIGIDLGTTNSCVSII 88
+ +IG+D G T + + +
Sbjct: 3 IRYLIGVDGGGTGTRIRLH 21
>d1v8za1 c.79.1.1 (A:1-386) Tryptophan synthase, beta-subunit
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 386
Score = 28.7 bits (63), Expect = 4.0
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 10/61 (16%)
Query: 217 DAQRQATKDAGRIAGLEVKRIINEPTAAALAFGLDKSGK--SDRNIVVYDLGGGTFDVSI 274
A + ++ G I LE +A A+A+ + + + D I+V G G D+ I
Sbjct: 329 KAFHELSRTEGIIPALE--------SAHAVAYAMKLAKEMSRDEIIIVNLSGRGDKDLDI 380
Query: 275 I 275
+
Sbjct: 381 V 381
>d1cjya2 c.19.1.2 (A:142-721) Cytosolic phospholipase A2 catalytic
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 580
Score = 28.4 bits (63), Expect = 4.8
Identities = 9/72 (12%), Positives = 20/72 (27%), Gaps = 7/72 (9%)
Query: 533 PPALRGIPQIEVTFDID-ANGILHVTAKDKKTGKENKITIKA------NSGLTEEEIKKM 585
P + + F A G+ T ++K+ + N + K++
Sbjct: 493 CPTIIHFVLANINFRKYKAPGVPRETEEEKEIADFDIFDDPESPFSTFNFQYPNQAFKRL 552
Query: 586 VQSAEANAEEDK 597
N +
Sbjct: 553 HDLMHFNTLNNI 564
>d1kq3a_ e.22.1.2 (A:) Glycerol dehydrogenase {Thermotoga maritima
[TaxId: 2336]}
Length = 364
Score = 28.1 bits (61), Expect = 5.2
Identities = 11/69 (15%), Positives = 24/69 (34%), Gaps = 7/69 (10%)
Query: 531 GIPPALRGIPQIEVTFDIDANGILHVTAKDKKTGKENKITIKANSGLTEEEIKKMVQSAE 590
G+P L I V+ + D + +T +T +++ +++A+
Sbjct: 303 GLPTTLAEIGLDGVSDE-DLMKVAEKACDKNETIHNEPQP------VTSKDVFFALKAAD 355
Query: 591 ANAEEDKRL 599
K L
Sbjct: 356 RYGRMRKNL 364
>d1u4ga_ d.92.1.2 (A:) Elastase {Pseudomonas aeruginosa [TaxId:
287]}
Length = 298
Score = 28.0 bits (62), Expect = 5.6
Identities = 13/66 (19%), Positives = 21/66 (31%), Gaps = 8/66 (12%)
Query: 636 IIYDQYGHAGIDPNMSGSSASAEASNFADAFGDIFGDIFGSNRDRDNNN------KGSNG 689
+ + H G SG ++ +AF D+ G+ R N+
Sbjct: 137 VAAHEVSH-GFTEQNSGLIYRGQSGGMNEAFSDMAGEAA-EFYMRGKNDFLIGYDIKKGS 194
Query: 690 KDLRYN 695
LRY
Sbjct: 195 GALRYM 200
>d1noya_ c.55.3.5 (A:) Exonuclease domain of family B DNA
polymerases {Bacteriophage T4 [TaxId: 10665]}
Length = 372
Score = 27.9 bits (61), Expect = 6.2
Identities = 8/57 (14%), Positives = 18/57 (31%), Gaps = 2/57 (3%)
Query: 143 GRKFNEKEVQKDISLMPYKIVKADNGDAWISVRGKKLAPPQISAEVLRKMKKTAEDY 199
N KE +++ +P + + GK AP ++ + +
Sbjct: 18 YIDENGKERTREVEYLPTMFRHCKEESKYKDIYGKNCAP--QKFPSMKDARDWMKRM 72
>d1ux5a_ a.207.1.1 (A:) Bni1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 411
Score = 27.8 bits (61), Expect = 7.7
Identities = 9/79 (11%), Positives = 29/79 (36%)
Query: 556 VTAKDKKTGKENKITIKANSGLTEEEIKKMVQSAEANAEEDKRLRELAESRNHGESLIHS 615
+T + ++ I + S L+ ++ K + + + + + + E E ++
Sbjct: 69 ITFLSRDISQQFGINLHMYSSLSVADLVKKILNCDRDFLQTPSVVEFLSKSEIIEVSVNL 128
Query: 616 TKKSLKIKEAYEVLSDSEK 634
+ +E + + E
Sbjct: 129 ARNYAPYSTDWEGVRNLED 147
>d1hjra_ c.55.3.6 (A:) RuvC resolvase {Escherichia coli [TaxId:
562]}
Length = 158
Score = 26.9 bits (59), Expect = 7.7
Identities = 8/28 (28%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 73 IIGIDLGTTNSCVSIIE--GSQPKVIEN 98
I+GID G+ + +I G Q + +
Sbjct: 3 ILGIDPGSRVTGYGVIRQVGRQLSYLGS 30
>d1nbwa3 c.55.1.6 (A:406-607) ATPase domain of the glycerol
dehydratase reactivase alpha subunit {Klebsiella
pneumoniae [TaxId: 573]}
Length = 202
Score = 27.0 bits (60), Expect = 8.8
Identities = 9/40 (22%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Query: 256 SDRNIVVYDLGGGTFDVSIIEIADVDGEKQFEVLSTNGDT 295
+ + DLG G+ D +I+ + +G+ L+ G+
Sbjct: 2 CAAPLAILDLGAGSTDAAIV---NAEGQITAVHLAGAGNM 38
>g1uhe.1 b.52.2.1 (B:,A:) Pyruvoyl dependent aspartate
decarboxylase, ADC {Helicobacter pylori [TaxId: 210]}
Length = 121
Score = 26.2 bits (58), Expect = 8.9
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 87 IIEGSQPKVIENSEGARTTPSVIAYQENGEILVGAPAKRQAVTNPKNTIYA 137
+ EG + ++++ + G R + VI ++ GEI V A R+ I A
Sbjct: 37 LREGMKVEIVDVNNGERFSTYVILGKKRGEICVNGAAARKVAIGDVVIILA 87
>d1sqla_ d.96.1.3 (A:) 7,8-dihydroneopterin aldolase {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 120
Score = 26.4 bits (58), Expect = 9.0
Identities = 8/48 (16%), Positives = 24/48 (50%)
Query: 300 EDFDQRIIDYILDEFNKINGIDLRKDSIALQRIKASAERAKIELSSSK 347
E + I L++F++IN + ++ + IK++ + +++ +
Sbjct: 73 ETVAELIASKTLEKFHQINAVRVKLSKPNVALIKSTIDYLGVDIFRQR 120
>d1bo9a_ a.65.1.1 (A:) Annexin I {Human (Homo sapiens) [TaxId:
9606]}
Length = 73
Score = 25.4 bits (56), Expect = 9.0
Identities = 11/69 (15%), Positives = 25/69 (36%), Gaps = 13/69 (18%)
Query: 393 AIKDAGIKVSDINDIILVGGMTRMPKVQEKVKEFFGKDPRRDINPDEAVAVGAAIQGSVL 452
AI G+ + I DI+ + +++ + GK + L
Sbjct: 14 AIMVKGVDEATIIDILTKRNNAQRQQIKAAYLQETGKPLDETLK-------------KAL 60
Query: 453 SGDRKDLLL 461
+G ++++L
Sbjct: 61 TGHLEEVVL 69
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.134 0.375
Gapped
Lambda K H
0.267 0.0697 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,494,515
Number of extensions: 178984
Number of successful extensions: 678
Number of sequences better than 10.0: 1
Number of HSP's gapped: 642
Number of HSP's successfully gapped: 77
Length of query: 945
Length of database: 2,407,596
Length adjustment: 94
Effective length of query: 851
Effective length of database: 1,116,976
Effective search space: 950546576
Effective search space used: 950546576
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 57 (25.8 bits)