RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy2907
         (88 letters)



>d2f9ya1 c.14.1.4 (A:4-319) Acetyl-coenzyme A carboxylase carboxyl
          transferase subunit alpha, AccA {Escherichia coli
          [TaxId: 562]}
          Length = 316

 Score = 23.9 bits (51), Expect = 3.1
 Identities = 11/52 (21%), Positives = 23/52 (44%)

Query: 31 NFEQLMVTMFDEKDKLLDNLRETQDRLSETSGKLSMVEKERDSLQRQIAASL 82
          +FEQ +  +  + D L    R+ +        ++  + ++   L R+I A L
Sbjct: 4  DFEQPIAELEAKIDSLTAGSRQDEKLDINIDEEVHRLREKSVELTRKIFADL 55


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.316    0.131    0.371 

Gapped
Lambda     K      H
   0.267   0.0522    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 288,895
Number of extensions: 10441
Number of successful extensions: 25
Number of sequences better than 10.0: 1
Number of HSP's gapped: 25
Number of HSP's successfully gapped: 3
Length of query: 88
Length of database: 2,407,596
Length adjustment: 53
Effective length of query: 35
Effective length of database: 1,679,906
Effective search space: 58796710
Effective search space used: 58796710
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 47 (22.4 bits)