RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy2909
         (165 letters)



>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium
           discoideum, class-I myosin MyoE [TaxId: 44689]}
          Length = 684

 Score = 77.0 bits (189), Expect = 9e-18
 Identities = 31/80 (38%), Positives = 48/80 (60%)

Query: 7   VQQDELFRFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVE 66
            +  +   FEQL IN+ NE LQ  F +   + EQEEY +EGI W++IE+ +N    +L+E
Sbjct: 382 FEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQEEYVREGIEWKNIEYFNNKPICELIE 441

Query: 67  GKPNGLLCVLDDQANWSRGN 86
            KP GL+ +LD+    ++  
Sbjct: 442 KKPIGLISLLDEACLIAKST 461


>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken
           (Gallus gallus), pectoral muscle [TaxId: 9031]}
          Length = 710

 Score = 72.1 bits (176), Expect = 5e-16
 Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 3/83 (3%)

Query: 7   VQQDELFRFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFS-DNTLCLQLV 65
            +  E+  FEQLCINY NE LQ  FN  +F  EQEEY +EGI W  I+F  D   C++L+
Sbjct: 390 FEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQPCIELI 449

Query: 66  EG--KPNGLLCVLDDQANWSRGN 86
           E    P G+L +LD++  + +  
Sbjct: 450 ERPTNPPGVLALLDEECWFPKAT 472


>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken
           (Gallus gallus), pectoral muscle [TaxId: 9031]}
          Length = 794

 Score = 70.9 bits (173), Expect = 1e-15
 Identities = 31/73 (42%), Positives = 44/73 (60%)

Query: 7   VQQDELFRFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVE 66
            +  +   FEQLCIN+ NE LQ +FN H+F  EQEEY KEGI W  I+F  +      + 
Sbjct: 418 FEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIEWEFIDFGMDLAACIELI 477

Query: 67  GKPNGLLCVLDDQ 79
            KP G+  +L+++
Sbjct: 478 EKPMGIFSILEEE 490


>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken
           (Gallus gallus), Va isoform [TaxId: 9031]}
          Length = 730

 Score = 69.0 bits (168), Expect = 6e-15
 Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 1/73 (1%)

Query: 7   VQQDELFRFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVE 66
            +  E+  FEQ CINYANE LQ  FN HVF+ EQEEY KE I W  I+F DN  C+ L+E
Sbjct: 379 FETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTLIDFYDNQPCINLIE 438

Query: 67  GKPNGLLCVLDDQ 79
            K  G+L +LD++
Sbjct: 439 AK-MGVLDLLDEE 450


>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay
           scallop (Aequipecten irradians) [TaxId: 31199]}
          Length = 789

 Score = 69.0 bits (168), Expect = 6e-15
 Identities = 33/76 (43%), Positives = 47/76 (61%)

Query: 11  ELFRFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDNTLCLQLVEGKPN 70
           +   FEQLCINY NE LQ +FN H+F  EQEEY KEGI W  I+F  +      +  KP 
Sbjct: 420 DFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEKPM 479

Query: 71  GLLCVLDDQANWSRGN 86
           G+L +L+++  + + +
Sbjct: 480 GILSILEEECMFPKAD 495


>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain
           {Dictyostelium discoideum [TaxId: 44689]}
          Length = 712

 Score = 65.5 bits (159), Expect = 1e-13
 Identities = 36/82 (43%), Positives = 53/82 (64%), Gaps = 2/82 (2%)

Query: 7   VQQDELFRFEQLCINYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEF-SDNTLCLQLV 65
            +  ++  FEQLCINY NE LQ +FN H+F+ EQEEY KE I W  I+F  D+   + L+
Sbjct: 411 FEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKINWTFIDFGLDSQATIDLI 470

Query: 66  EG-KPNGLLCVLDDQANWSRGN 86
           +G +P G+L +LD+Q+ +    
Sbjct: 471 DGRQPPGILALLDEQSVFPNAT 492


>d1p1ja1 c.2.1.3 (A:9-322,A:438-533) Myo-inositol 1-phosphate
           synthase {Baker's yeast (Saccharomyces cerevisiae)
           [TaxId: 4932]}
          Length = 410

 Score = 25.2 bits (55), Expect = 4.5
 Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 8/59 (13%)

Query: 54  EFSDNTLCLQLVEGKPNGLLCVLDDQANWSRGNPMVSCVFWMIKPRLFAPTPKPLNGLF 112
           EF         V  K      V +D   +    P+++ + + +K  L  P   P+NGL 
Sbjct: 331 EFCTR------VSYKKVDP--VKEDAGKFENFYPVLTFLSYWLKAPLTRPGFHPVNGLN 381


>d1e93a_ e.5.1.1 (A:) Catalase I {Proteus mirabilis [TaxId: 584]}
          Length = 476

 Score = 24.9 bits (54), Expect = 5.9
 Identities = 8/39 (20%), Positives = 10/39 (25%)

Query: 20  INYANEHLQYYFNQHVFQYEQEEYNKEGIRWRHIEFSDN 58
           I Y       +  Q  F+            W H E  D 
Sbjct: 377 ITYEPNSGGVFQEQPDFKEPPLSIEGAADHWNHREDEDY 415


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.325    0.142    0.472 

Gapped
Lambda     K      H
   0.267   0.0521    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 674,963
Number of extensions: 31460
Number of successful extensions: 101
Number of sequences better than 10.0: 1
Number of HSP's gapped: 101
Number of HSP's successfully gapped: 13
Length of query: 165
Length of database: 2,407,596
Length adjustment: 79
Effective length of query: 86
Effective length of database: 1,322,926
Effective search space: 113771636
Effective search space used: 113771636
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 49 (23.1 bits)