Query psy2912
Match_columns 232
No_of_seqs 238 out of 1949
Neff 8.9
Searched_HMMs 29240
Date Fri Aug 16 20:47:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2912.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2912hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 99.9 2.6E-25 9E-30 200.3 9.9 134 77-213 31-178 (510)
2 3v2y_A Sphingosine 1-phosphate 99.9 1.4E-24 4.9E-29 195.8 11.4 141 79-224 64-213 (520)
3 1u19_A Rhodopsin; G protein-co 99.9 4.5E-24 1.5E-28 181.5 13.3 135 75-213 35-178 (349)
4 2lnl_A C-X-C chemokine recepto 99.9 5.5E-24 1.9E-28 178.0 12.2 134 75-214 8-150 (296)
5 3pbl_A D(3) dopamine receptor, 99.9 1.3E-24 4.6E-29 192.7 7.2 146 77-222 37-192 (481)
6 3uon_A Human M2 muscarinic ace 99.9 9.3E-24 3.2E-28 186.4 10.7 136 75-213 20-164 (467)
7 2rh1_A Beta-2-adrenergic recep 99.9 5.7E-24 2E-28 190.9 8.5 136 75-213 37-182 (500)
8 2ks9_A Substance-P receptor; w 99.9 8E-23 2.7E-27 175.3 12.1 126 79-209 33-167 (364)
9 3odu_A C-X-C chemokine recepto 99.9 4.2E-23 1.4E-27 184.0 10.1 147 74-225 44-201 (502)
10 3vw7_A Proteinase-activated re 99.9 4.7E-23 1.6E-27 182.9 9.9 137 73-213 15-161 (484)
11 4dkl_A MU-type opioid receptor 99.9 4.9E-23 1.7E-27 181.5 9.6 133 75-211 14-155 (464)
12 3eml_A Human adenosine A2A rec 99.9 2.2E-22 7.6E-27 178.4 11.1 135 74-213 17-160 (488)
13 2z73_A Rhodopsin; visual pigme 99.9 3.9E-22 1.3E-26 176.0 12.6 146 77-225 33-191 (448)
14 4ea3_A Fusion protein of nocic 99.9 2.3E-22 7.9E-27 177.2 11.0 148 74-225 121-279 (434)
15 4eiy_A Adenosine receptor A2A/ 99.9 2E-22 6.7E-27 177.0 8.9 133 76-213 29-170 (447)
16 3rze_A Histamine H1 receptor, 99.9 1.7E-22 5.7E-27 177.7 8.2 132 78-213 8-148 (452)
17 4amj_A Beta-1 adrenergic recep 99.9 1.5E-22 5.2E-27 169.3 6.3 132 77-211 10-150 (315)
18 3sn6_R Lysozyme, beta-2 adrene 99.9 2.7E-22 9.2E-27 180.4 5.3 137 74-213 178-324 (514)
19 1hll_A Alpha-2A adrenergic rec 98.3 3E-07 1E-11 50.4 2.4 27 157-183 4-30 (32)
20 2lot_A Apelin receptor; membra 96.9 3E-05 1E-09 49.2 -3.1 30 80-109 30-59 (64)
21 3arc_I Photosystem II reaction 24.9 72 0.0025 17.3 2.7 17 80-96 10-26 (38)
22 2l2t_A Receptor tyrosine-prote 24.2 1E+02 0.0036 17.4 4.2 9 100-108 30-38 (44)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.92 E-value=2.6e-25 Score=200.27 Aligned_cols=134 Identities=18% Similarity=0.269 Sum_probs=111.5
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhhhhhccCCCC---cchhhHHHHHHHHHHHHHhhhhhHHHHHhhc--cceecccccc
Q psy2912 77 SEWVLIALQSIVFVVGLIGNALVCIAVYRNKSMR---TVTNYYIVNLAVADFLVILICLPPTVVWDVT--ETWFMGLVLC 151 (232)
Q Consensus 77 ~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~l~---~~~~~~i~nLa~aDll~~l~~~p~~i~~~~~--~~w~~~~~~C 151 (232)
.++++.++|.+++++|++||++|++++.++|++| +++|+|++|||++|++++++.+|+.+..... +.|.+|+.+|
T Consensus 31 ~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~~~C 110 (510)
T 4grv_A 31 SKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGC 110 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhHHHH
Confidence 4577888999999999999999999998876544 6889999999999999999999998887654 5799999999
Q ss_pred chhhHHHH---------HHHHHHHHHHHHHhccccccccceeeeeeeehhHHHHHHHHHHHhhccccceee
Q psy2912 152 RVVLYSQV---------IFIMYLDYYNTMIKLTNRKQSKYIHKKTIGTFLCKEESFLTTGISLYPKSSYYM 213 (232)
Q Consensus 152 ~~~~~~~~---------~~~iaidRy~aI~~P~~~~~~~~~~~~~~~~~~~~~iw~~~~~~~~~p~~~~~~ 213 (232)
++..++.. +++||+|||+||++|++|+..+++ +.+..++.++|++++++++|++++|..
T Consensus 111 ~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~---~~~~~~i~~~W~~s~~~~~p~~~~~~~ 178 (510)
T 4grv_A 111 RGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSR---SRTKKFISAIWLASALLAIPMLFTMGL 178 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCC---SCCHHHHHHHHHHHHHHHTTHHHHEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccc---cccceeehHHHHHHHHHHHHHHHhhcc
Confidence 99988764 348999999999999998877644 344666778899999999999988643
No 2
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.91 E-value=1.4e-24 Score=195.81 Aligned_cols=141 Identities=13% Similarity=0.114 Sum_probs=113.7
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCcchhhHHHHHHHHHHHHHhhhhhHHHHHhhccceeccccccchhhHHH
Q psy2912 79 WVLIALQSIVFVVGLIGNALVCIAVYRNKSMRTVTNYYIVNLAVADFLVILICLPPTVVWDVTETWFMGLVLCRVVLYSQ 158 (232)
Q Consensus 79 ~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~l~~~~~~~i~nLa~aDll~~l~~~p~~i~~~~~~~w~~~~~~C~~~~~~~ 158 (232)
.+..+++++++++|++||++|++++.++|++|+++|+|++|||++|++++++.+|..+.. ....|.++...|++..++.
T Consensus 64 ~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~~~~~~~~c~~~~~~~ 142 (520)
T 3v2y_A 64 KLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS-GATTYKLTPAQWFLREGSM 142 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGGTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccceeeCccccchHHHHH
Confidence 678899999999999999999999999999999999999999999999999888877765 5567889999999887765
Q ss_pred H---------HHHHHHHHHHHHHhccccccccceeeeeeeehhHHHHHHHHHHHhhccccceeecCCCCceeecC
Q psy2912 159 V---------IFIMYLDYYNTMIKLTNRKQSKYIHKKTIGTFLCKEESFLTTGISLYPKSSYYMSKKQGRKSASI 224 (232)
Q Consensus 159 ~---------~~~iaidRy~aI~~P~~~~~~~~~~~~~~~~~~~~~iw~~~~~~~~~p~~~~~~~~~~~~c~~~~ 224 (232)
. +++||+|||+||+ |++|+..++.+ .+..++.++|++++++++||+++|....+...|..+.
T Consensus 143 ~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t~~---~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~C~~~~ 213 (520)
T 3v2y_A 143 FVALSASVFSLLAIAIERYITML-KMKLHNGSNNF---RLFLLISACWVISLILGGLPIMGWNCISALSSCSTVL 213 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC-C-------CCH---HHHHHHHHHHHHHHHHHHTTTTTCBCTTCGGGBCSSS
T ss_pred HHHHHHHHHHHHHHHHHHhhEEe-ccccccccchh---HHHHHHHHHHHHHHHHHHHHHHeeccccCCCcccccC
Confidence 3 3489999999999 99987766433 3456677899999999999999988765555565544
No 3
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.91 E-value=4.5e-24 Score=181.52 Aligned_cols=135 Identities=16% Similarity=0.191 Sum_probs=115.7
Q ss_pred CchhHHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCcchhhHHHHHHHHHHHHHhhhhhHHHHHhhccceeccccccchh
Q psy2912 75 TSSEWVLIALQSIVFVVGLIGNALVCIAVYRNKSMRTVTNYYIVNLAVADFLVILICLPPTVVWDVTETWFMGLVLCRVV 154 (232)
Q Consensus 75 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~l~~~~~~~i~nLa~aDll~~l~~~p~~i~~~~~~~w~~~~~~C~~~ 154 (232)
+....+..+++.+++++|++||+++++++.++|++|++.|+++.|||++|++.+++.+|..+.....+.|.+|...|++.
T Consensus 35 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 114 (349)
T 1u19_A 35 PWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLE 114 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHHHHH
Confidence 34456778899999999999999999999999999999999999999999999999999988887788899999999998
Q ss_pred hHHHH---------HHHHHHHHHHHHHhccccccccceeeeeeeehhHHHHHHHHHHHhhccccceee
Q psy2912 155 LYSQV---------IFIMYLDYYNTMIKLTNRKQSKYIHKKTIGTFLCKEESFLTTGISLYPKSSYYM 213 (232)
Q Consensus 155 ~~~~~---------~~~iaidRy~aI~~P~~~~~~~~~~~~~~~~~~~~~iw~~~~~~~~~p~~~~~~ 213 (232)
.++.. +++||+|||+||++|+++++ .+ .+.+..++.++|+++.++++||+++|..
T Consensus 115 ~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~-~~---~~~~~~~i~~~W~~~~~~~~~~~~~~~~ 178 (349)
T 1u19_A 115 GFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FG---ENHAIMGVAFTWVMALACAAPPLVGWSR 178 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCC-CC---HHHHHHHHHHHHHHHHHHHSGGGTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheeeCCcccee-ec---cchhHHHHHHHHHHHHHHHHHHHHheee
Confidence 87664 34899999999999998764 32 2334566778899999999999998754
No 4
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.91 E-value=5.5e-24 Score=178.03 Aligned_cols=134 Identities=30% Similarity=0.455 Sum_probs=111.1
Q ss_pred CchhHHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCcchhhHHHHHHHHHHHHHhhhhhHHHHHhhccceeccccccchh
Q psy2912 75 TSSEWVLIALQSIVFVVGLIGNALVCIAVYRNKSMRTVTNYYIVNLAVADFLVILICLPPTVVWDVTETWFMGLVLCRVV 154 (232)
Q Consensus 75 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~l~~~~~~~i~nLa~aDll~~l~~~p~~i~~~~~~~w~~~~~~C~~~ 154 (232)
...+++..++|.+++++|++||+++++++.++|++|+++|+++.|||++|++.++ .+|+.+.... .+|.+|+..|+..
T Consensus 8 ~~~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l-~~p~~~~~~~-~~~~~~~~~c~~~ 85 (296)
T 2lnl_A 8 TLNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFAL-TLPIWAASKV-NGWIFGTFLCKVV 85 (296)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHH-HHHHHHHHHH-SSSCCSSHHHHHH
T ss_pred chhHHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHH-hhhHHHhhcc-CCCccchhHHHHH
Confidence 4456788899999999999999999999999999999999999999999999976 6777776554 5699999999999
Q ss_pred hHHHH---------HHHHHHHHHHHHHhccccccccceeeeeeeehhHHHHHHHHHHHhhccccceeec
Q psy2912 155 LYSQV---------IFIMYLDYYNTMIKLTNRKQSKYIHKKTIGTFLCKEESFLTTGISLYPKSSYYMS 214 (232)
Q Consensus 155 ~~~~~---------~~~iaidRy~aI~~P~~~~~~~~~~~~~~~~~~~~~iw~~~~~~~~~p~~~~~~~ 214 (232)
.++.. +++||+|||+||++|++++...+ + ....++.++|+++.++++|+..++...
T Consensus 86 ~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~~-~---~~~~~~~~~W~~s~~~~~p~~~~~~~~ 150 (296)
T 2lnl_A 86 SLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKR-H---LVKFVCLGCWGLSMNLSLPFFLFRQAY 150 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSSSCCHH-H---HHHHHHHHHHHHHHHHHHHHHHTSSCC
T ss_pred hhhhhhhHHHHHHHHHHHHhhhhhhhhhccccchhhh-h---hhHheehHHHHHHHHHhcchhhcceee
Confidence 87664 34899999999999998765432 2 234455678999999999988876553
No 5
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.90 E-value=1.3e-24 Score=192.71 Aligned_cols=146 Identities=22% Similarity=0.317 Sum_probs=120.1
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCcchhhHHHHHHHHHHHHHhhhhhHHHHHhhc-cceeccccccchhh
Q psy2912 77 SEWVLIALQSIVFVVGLIGNALVCIAVYRNKSMRTVTNYYIVNLAVADFLVILICLPPTVVWDVT-ETWFMGLVLCRVVL 155 (232)
Q Consensus 77 ~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~l~~~~~~~i~nLa~aDll~~l~~~p~~i~~~~~-~~w~~~~~~C~~~~ 155 (232)
...+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.+++.+|..+..... +.|.+|...|++..
T Consensus 37 ~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~~~ 116 (481)
T 3pbl_A 37 PHAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVFV 116 (481)
T ss_dssp ----CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhhHH
Confidence 34566788999999999999999999999999999999999999999999999999998877666 67999999999998
Q ss_pred HHHH---------HHHHHHHHHHHHHhccccccccceeeeeeeehhHHHHHHHHHHHhhccccceeecCCCCceee
Q psy2912 156 YSQV---------IFIMYLDYYNTMIKLTNRKQSKYIHKKTIGTFLCKEESFLTTGISLYPKSSYYMSKKQGRKSA 222 (232)
Q Consensus 156 ~~~~---------~~~iaidRy~aI~~P~~~~~~~~~~~~~~~~~~~~~iw~~~~~~~~~p~~~~~~~~~~~~c~~ 222 (232)
++.. +++||+|||+||++|++|+......+.+.+..++.++|++++++++|++++|........|..
T Consensus 117 ~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~C~~ 192 (481)
T 3pbl_A 117 TLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTTGDPTVCSI 192 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTTCCCSSTTCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHheecccCCCCcccc
Confidence 7664 348999999999999998543333344556677789999999999999998776555555644
No 6
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.90 E-value=9.3e-24 Score=186.45 Aligned_cols=136 Identities=20% Similarity=0.326 Sum_probs=118.6
Q ss_pred CchhHHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCcchhhHHHHHHHHHHHHHhhhhhHHHHHhhccceeccccccchh
Q psy2912 75 TSSEWVLIALQSIVFVVGLIGNALVCIAVYRNKSMRTVTNYYIVNLAVADFLVILICLPPTVVWDVTETWFMGLVLCRVV 154 (232)
Q Consensus 75 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~l~~~~~~~i~nLa~aDll~~l~~~p~~i~~~~~~~w~~~~~~C~~~ 154 (232)
.....+..+++.+++++|++||+++++++.+++++|+++++|+.|||++|++.+++.+|..+.....+.|.+|...|++.
T Consensus 20 ~~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 99 (467)
T 3uon_A 20 TFEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLW 99 (467)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhHH
Confidence 34567888999999999999999999999999999999999999999999999999999999988889999999999999
Q ss_pred hHHHHH---------HHHHHHHHHHHHhccccccccceeeeeeeehhHHHHHHHHHHHhhccccceee
Q psy2912 155 LYSQVI---------FIMYLDYYNTMIKLTNRKQSKYIHKKTIGTFLCKEESFLTTGISLYPKSSYYM 213 (232)
Q Consensus 155 ~~~~~~---------~~iaidRy~aI~~P~~~~~~~~~~~~~~~~~~~~~iw~~~~~~~~~p~~~~~~ 213 (232)
.++..+ ++||+|||+||++|++|+...+. +.+..++.++|++++++++|++++|..
T Consensus 100 ~~~~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~---~~~~~~i~~~W~~~~~~~~~~~~~~~~ 164 (467)
T 3uon_A 100 LALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTT---KMAGMMIAAAWVLSFILWAPAILFWQF 164 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCH---HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccch---hHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 887643 48999999999999998766533 344566778899999999999887643
No 7
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.89 E-value=5.7e-24 Score=190.86 Aligned_cols=136 Identities=20% Similarity=0.263 Sum_probs=115.2
Q ss_pred CchhHHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCcchhhHHHHHHHHHHHHHhhhhhHHHHHhhccceeccccccchh
Q psy2912 75 TSSEWVLIALQSIVFVVGLIGNALVCIAVYRNKSMRTVTNYYIVNLAVADFLVILICLPPTVVWDVTETWFMGLVLCRVV 154 (232)
Q Consensus 75 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~l~~~~~~~i~nLa~aDll~~l~~~p~~i~~~~~~~w~~~~~~C~~~ 154 (232)
.....++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|++++++.+|+.+.....+.|.+|...|++.
T Consensus 37 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~~~ 116 (500)
T 2rh1_A 37 EVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEFW 116 (500)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhhHH
Confidence 44456778899999999999999999999999999999999999999999999999999999888888999999999998
Q ss_pred hHHHH---------HHHHHHHHHHHHHhccccccccceeeeeeeehhHHHHHHHHHHHhhccc-cceee
Q psy2912 155 LYSQV---------IFIMYLDYYNTMIKLTNRKQSKYIHKKTIGTFLCKEESFLTTGISLYPK-SSYYM 213 (232)
Q Consensus 155 ~~~~~---------~~~iaidRy~aI~~P~~~~~~~~~~~~~~~~~~~~~iw~~~~~~~~~p~-~~~~~ 213 (232)
.++.. +++||+|||+||++|++|++.++. +.+..++.++|+++++++++|+ ++|..
T Consensus 117 ~~~~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~---~~~~~~i~~~W~~s~~~~~~p~~~~~~~ 182 (500)
T 2rh1_A 117 TSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTK---NKARVIILMVWIVSGLTSFLPIQMHWYR 182 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCH---HHHHHHHHHHHHHHHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHeeccCcCCeeecc---cceeehhhHHHHHHHHHHhcchheeeec
Confidence 87654 348999999999999997765533 3445667788999999887665 45544
No 8
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.89 E-value=8e-23 Score=175.25 Aligned_cols=126 Identities=23% Similarity=0.361 Sum_probs=107.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCcchhhHHHHHHHHHHHHHhhhhhHHHHHhhccceeccccccchhhHHH
Q psy2912 79 WVLIALQSIVFVVGLIGNALVCIAVYRNKSMRTVTNYYIVNLAVADFLVILICLPPTVVWDVTETWFMGLVLCRVVLYSQ 158 (232)
Q Consensus 79 ~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~l~~~~~~~i~nLa~aDll~~l~~~p~~i~~~~~~~w~~~~~~C~~~~~~~ 158 (232)
.+..+++.+++++|++||+++++++.++|++|+++|+++.|||++|++.+++.+|..+.....+.|.+|+..|++..++.
T Consensus 33 ~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~ 112 (364)
T 2ks9_A 33 VLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFP 112 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhHHHHH
Confidence 45588999999999999999999999999999999999999999999999999999888887889999999999988765
Q ss_pred H---------HHHHHHHHHHHHHhccccccccceeeeeeeehhHHHHHHHHHHHhhcccc
Q psy2912 159 V---------IFIMYLDYYNTMIKLTNRKQSKYIHKKTIGTFLCKEESFLTTGISLYPKS 209 (232)
Q Consensus 159 ~---------~~~iaidRy~aI~~P~~~~~~~~~~~~~~~~~~~~~iw~~~~~~~~~p~~ 209 (232)
. +++||+|||+||++|++++.. .+....++.++|++++++++|+.+
T Consensus 113 ~~~~~~s~~~l~~isidRy~aI~~P~~~~~~-----~~~~~~~i~~~W~~s~~~~~p~~~ 167 (364)
T 2ks9_A 113 IAAVFASIYSMTAVAFDRYMAIIHPLQPRLS-----ATATKVVICVIWVLALLLAFPQGY 167 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCTTSCC-----HHHHHHHHHHHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccccc-----cchHHHHHHHHHHHHHHHHhHHHH
Confidence 4 348999999999999986522 222345566789999888887654
No 9
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.88 E-value=4.2e-23 Score=184.01 Aligned_cols=147 Identities=24% Similarity=0.360 Sum_probs=118.8
Q ss_pred CCchhHHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCcchhhHHHHHHHHHHHHHhhhhhHHHHHhhccceeccccccch
Q psy2912 74 PTSSEWVLIALQSIVFVVGLIGNALVCIAVYRNKSMRTVTNYYIVNLAVADFLVILICLPPTVVWDVTETWFMGLVLCRV 153 (232)
Q Consensus 74 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~l~~~~~~~i~nLa~aDll~~l~~~p~~i~~~~~~~w~~~~~~C~~ 153 (232)
......+..+++.+++++|++||+++++++.+++++|+++|+|++|||++|++++ +.+|+.+..... .|.+|...|++
T Consensus 44 ~~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~~-~~~~~~~~C~~ 121 (502)
T 3odu_A 44 ANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAVA-NWYFGNFLCKA 121 (502)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHHT-CCCSHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHhc-CCcCCchhhhh
Confidence 3556678899999999999999999999999999999999999999999999995 589988876654 79999999999
Q ss_pred hhHHHH---------HHHHHHHHHHHHHhccccccccceeeeeeeehhHHHHHHHHHHHhhccccceeec--CCCCceee
Q psy2912 154 VLYSQV---------IFIMYLDYYNTMIKLTNRKQSKYIHKKTIGTFLCKEESFLTTGISLYPKSSYYMS--KKQGRKSA 222 (232)
Q Consensus 154 ~~~~~~---------~~~iaidRy~aI~~P~~~~~~~~~~~~~~~~~~~~~iw~~~~~~~~~p~~~~~~~--~~~~~c~~ 222 (232)
..++.. +++||+|||+||++|++|+..++. +.+..++.++|++++++++|+++.+... .....|..
T Consensus 122 ~~~~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~---~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~C~~ 198 (502)
T 3odu_A 122 VHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKL---LAEKVVYVGVWIPALLLTIPDFIFANVSEADDRYICDR 198 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHH---HHHTHHHHHTHHHHHHTTHHHHHHEEEEECSSSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhheecccccccccch---hHHHHhhhHHHHHHHHHHHHHHHheeeeccCCceEEee
Confidence 988764 348999999999999988766533 3345666788999999999988765432 22233654
Q ss_pred cCC
Q psy2912 223 SIP 225 (232)
Q Consensus 223 ~~~ 225 (232)
..+
T Consensus 199 ~~~ 201 (502)
T 3odu_A 199 FYP 201 (502)
T ss_dssp CCS
T ss_pred cCC
Confidence 433
No 10
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.88 E-value=4.7e-23 Score=182.92 Aligned_cols=137 Identities=18% Similarity=0.229 Sum_probs=110.8
Q ss_pred CCCchhHHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCcchhhHHHHHHHHHHHHHhhhhhHHHHHhhc-cceecccccc
Q psy2912 73 KPTSSEWVLIALQSIVFVVGLIGNALVCIAVYRNKSMRTVTNYYIVNLAVADFLVILICLPPTVVWDVT-ETWFMGLVLC 151 (232)
Q Consensus 73 ~~~~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~l~~~~~~~i~nLa~aDll~~l~~~p~~i~~~~~-~~w~~~~~~C 151 (232)
.+.....++.+++.+++++|++||+++++++.+++++|+++|+|+.|||++|+++++ .+|+.+..... +.|.+|...|
T Consensus 15 ~~~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~-~~~~~~~~~~~~~~~~~~~~~C 93 (484)
T 3vw7_A 15 TSSWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVS-VLPFKISYYFSGSDWQFGSELC 93 (484)
T ss_dssp TCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHT-THHHHHHHHHTTSCCCSCHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCcccchhHH
Confidence 445566788999999999999999999999999999999999999999999999976 56666655554 4899999999
Q ss_pred chhhHHHH---------HHHHHHHHHHHHHhccccccccceeeeeeeehhHHHHHHHHHHHhhccccceee
Q psy2912 152 RVVLYSQV---------IFIMYLDYYNTMIKLTNRKQSKYIHKKTIGTFLCKEESFLTTGISLYPKSSYYM 213 (232)
Q Consensus 152 ~~~~~~~~---------~~~iaidRy~aI~~P~~~~~~~~~~~~~~~~~~~~~iw~~~~~~~~~p~~~~~~ 213 (232)
++..++.. +++||+|||+||++|++|+..++. +.+..++.++|++++++++|+++++..
T Consensus 94 ~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~---~~~~~~i~~~W~~s~~~~~p~~~~~~~ 161 (484)
T 3vw7_A 94 RFVTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTL---GRASFTCLAIWALAIAGVVPLLLKEQT 161 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCH---HHHHHHHHHHHHHHHHHHHHHHTSCCE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccch---hHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 99987764 348999999999999998765533 344566778899999999999988654
No 11
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.88 E-value=4.9e-23 Score=181.50 Aligned_cols=133 Identities=31% Similarity=0.383 Sum_probs=114.5
Q ss_pred CchhHHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCcchhhHHHHHHHHHHHHHhhhhhHHHHHhhccceeccccccchh
Q psy2912 75 TSSEWVLIALQSIVFVVGLIGNALVCIAVYRNKSMRTVTNYYIVNLAVADFLVILICLPPTVVWDVTETWFMGLVLCRVV 154 (232)
Q Consensus 75 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~l~~~~~~~i~nLa~aDll~~l~~~p~~i~~~~~~~w~~~~~~C~~~ 154 (232)
.....++.+++.+++++|++||+++++++.+++++|+++|+|+.|||++|++.++. +|+.+.....+.|.+|...|++.
T Consensus 14 ~~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~~~~~~~~~C~~~ 92 (464)
T 4dkl_A 14 MVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLMGTWPFGNILCKIV 92 (464)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSCCSCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcccccchhhhH
Confidence 34467889999999999999999999999999999999999999999999999875 99999888888999999999999
Q ss_pred hHHHH---------HHHHHHHHHHHHHhccccccccceeeeeeeehhHHHHHHHHHHHhhccccce
Q psy2912 155 LYSQV---------IFIMYLDYYNTMIKLTNRKQSKYIHKKTIGTFLCKEESFLTTGISLYPKSSY 211 (232)
Q Consensus 155 ~~~~~---------~~~iaidRy~aI~~P~~~~~~~~~~~~~~~~~~~~~iw~~~~~~~~~p~~~~ 211 (232)
.++.. +++||+|||+||++|++|+...+.+ .+..++.++|++++++++|+++.+
T Consensus 93 ~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~---~~~~~~~~~W~~~~~~~~p~~~~~ 155 (464)
T 4dkl_A 93 ISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPR---NAKIVNVCNWILSSAIGLPVMFMA 155 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHH---HHHHHHHHHHHHHHHHHHHHHHSB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccc---HhHHhHHHHHHHHHHHHHHHHHhe
Confidence 88764 3489999999999999987665333 345566788999999998887753
No 12
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.87 E-value=2.2e-22 Score=178.38 Aligned_cols=135 Identities=23% Similarity=0.318 Sum_probs=114.9
Q ss_pred CCchhHHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCcchhhHHHHHHHHHHHHHhhhhhHHHHHhhccceeccccccch
Q psy2912 74 PTSSEWVLIALQSIVFVVGLIGNALVCIAVYRNKSMRTVTNYYIVNLAVADFLVILICLPPTVVWDVTETWFMGLVLCRV 153 (232)
Q Consensus 74 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~l~~~~~~~i~nLa~aDll~~l~~~p~~i~~~~~~~w~~~~~~C~~ 153 (232)
+.....+..+++.+++++|++||+++++++.+++++|++.++|++|||++|++.+++.+|+.+.... .|.++...|++
T Consensus 17 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~--~~~~~~~~C~~ 94 (488)
T 3eml_A 17 PIMGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST--GFCAACHGCLF 94 (488)
T ss_dssp -CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHTT--CCEECHHHHHH
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cccccchHHHH
Confidence 3445578889999999999999999999999999999999999999999999999999998887543 68889999999
Q ss_pred hhHHHH---------HHHHHHHHHHHHHhccccccccceeeeeeeehhHHHHHHHHHHHhhccccceee
Q psy2912 154 VLYSQV---------IFIMYLDYYNTMIKLTNRKQSKYIHKKTIGTFLCKEESFLTTGISLYPKSSYYM 213 (232)
Q Consensus 154 ~~~~~~---------~~~iaidRy~aI~~P~~~~~~~~~~~~~~~~~~~~~iw~~~~~~~~~p~~~~~~ 213 (232)
..++.. +++||+|||++|++|++|+...+. +.+..++.++|++++++++||+++|..
T Consensus 95 ~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~---~~~~~~i~~~W~~s~~~~~~~~~~~~~ 160 (488)
T 3eml_A 95 IACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTG---TRAKGIIAICWVLSFAIGLTPMLGWNN 160 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCH---HHHHHHHHHHHHHHHHHHTTGGGTCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhheeEecccccccccCH---HHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 988764 348999999999999998766533 344566778899999999999998765
No 13
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.87 E-value=3.9e-22 Score=176.02 Aligned_cols=146 Identities=18% Similarity=0.223 Sum_probs=120.0
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCcchhhHHHHHHHHHHHHHhhh-hhHHHHHhhccceeccccccchhh
Q psy2912 77 SEWVLIALQSIVFVVGLIGNALVCIAVYRNKSMRTVTNYYIVNLAVADFLVILIC-LPPTVVWDVTETWFMGLVLCRVVL 155 (232)
Q Consensus 77 ~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~l~~~~~~~i~nLa~aDll~~l~~-~p~~i~~~~~~~w~~~~~~C~~~~ 155 (232)
...++.+++.+++++|++||+++++++.++|++|++.+++++|||++|++.+++. +|..+.....+.|.++...|++..
T Consensus 33 ~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 112 (448)
T 2z73_A 33 VYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAACKVYG 112 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCHHHHHHHH
Confidence 4567788999999999999999999999999999999999999999999998874 898888888889999999999988
Q ss_pred HHHH---------HHHHHHHHHHHHHhccccccccceeeeeeeehhHHHHHHHHHHHhhccccceeec---CCCCceeec
Q psy2912 156 YSQV---------IFIMYLDYYNTMIKLTNRKQSKYIHKKTIGTFLCKEESFLTTGISLYPKSSYYMS---KKQGRKSAS 223 (232)
Q Consensus 156 ~~~~---------~~~iaidRy~aI~~P~~~~~~~~~~~~~~~~~~~~~iw~~~~~~~~~p~~~~~~~---~~~~~c~~~ 223 (232)
++.. +++||+|||++|++|+++++..++ +.+..++.++|+++++++++++++|... .....|..+
T Consensus 113 ~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~---~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~~~~~~c~~~ 189 (448)
T 2z73_A 113 FIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSH---RRAFIMIIFVWLWSVLWAIGPIFGWGAYTLEGVLCNCSFD 189 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCH---HHHHHHHHHHHHHHHHHHSGGGGTSSCEEECTTSSSEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccccccceech---hHHHHHHHHHHHHHHHHHHHHHhceeeeeecCCceeEecc
Confidence 7654 348999999999999987665533 3456667788999999999999987542 223346554
Q ss_pred CC
Q psy2912 224 IP 225 (232)
Q Consensus 224 ~~ 225 (232)
..
T Consensus 190 ~~ 191 (448)
T 2z73_A 190 YI 191 (448)
T ss_dssp CS
T ss_pred cc
Confidence 43
No 14
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.87 E-value=2.3e-22 Score=177.16 Aligned_cols=148 Identities=26% Similarity=0.310 Sum_probs=113.9
Q ss_pred CCchhHHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCcchhhHHHHHHHHHHHHHhhhhhHHHHHhhccceeccccccch
Q psy2912 74 PTSSEWVLIALQSIVFVVGLIGNALVCIAVYRNKSMRTVTNYYIVNLAVADFLVILICLPPTVVWDVTETWFMGLVLCRV 153 (232)
Q Consensus 74 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~l~~~~~~~i~nLa~aDll~~l~~~p~~i~~~~~~~w~~~~~~C~~ 153 (232)
+...+.++.+++.+++++|++||+++++++.+++++|+++|+++.|||++|++. ++.+|..+.....+.|.++...|++
T Consensus 121 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~~~~~~~~~C~~ 199 (434)
T 4ea3_A 121 PLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLGFWPFGNALCKT 199 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHTSCTTHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhcCCcCcccHHHH
Confidence 455667888899999999999999999999999999999999999999999998 5689999988888899999999999
Q ss_pred hhHHHH---------HHHHHHHHHHHHHhccccccccceeeeeeeehhHHHHHHHHHHHhhcccccee-e-cCCCCceee
Q psy2912 154 VLYSQV---------IFIMYLDYYNTMIKLTNRKQSKYIHKKTIGTFLCKEESFLTTGISLYPKSSYY-M-SKKQGRKSA 222 (232)
Q Consensus 154 ~~~~~~---------~~~iaidRy~aI~~P~~~~~~~~~~~~~~~~~~~~~iw~~~~~~~~~p~~~~~-~-~~~~~~c~~ 222 (232)
..++.. +++||+|||++|++|++|+..++.++ +..++.++|++++++++|+.+... . ......|..
T Consensus 200 ~~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~---~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~c~~ 276 (434)
T 4ea3_A 200 VIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSK---AQAVNVAIWALASVVGVPVAIMGSAQVEDEEIECLV 276 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHH---HHHHHHHHHHHHHHHHHHHHHHEEECCCSSCCCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhEEEcccccccccchhh---hHHhhhhhhhHHHHHHhhHheeeeeEeecCceeEEE
Confidence 987764 34899999999999999876654433 345566789898898887665422 2 223344655
Q ss_pred cCC
Q psy2912 223 SIP 225 (232)
Q Consensus 223 ~~~ 225 (232)
..+
T Consensus 277 ~~~ 279 (434)
T 4ea3_A 277 EIP 279 (434)
T ss_dssp CCC
T ss_pred ecC
Confidence 443
No 15
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.87 E-value=2e-22 Score=176.99 Aligned_cols=133 Identities=23% Similarity=0.305 Sum_probs=113.0
Q ss_pred chhHHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCcchhhHHHHHHHHHHHHHhhhhhHHHHHhhccceeccccccchhh
Q psy2912 76 SSEWVLIALQSIVFVVGLIGNALVCIAVYRNKSMRTVTNYYIVNLAVADFLVILICLPPTVVWDVTETWFMGLVLCRVVL 155 (232)
Q Consensus 76 ~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~l~~~~~~~i~nLa~aDll~~l~~~p~~i~~~~~~~w~~~~~~C~~~~ 155 (232)
....+..+++.+++++|++||+++++++.+++++|+++|+++.|||++|++.+++.+|..+... ..|..+...|++..
T Consensus 29 ~~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~--~~~~~~~~~C~~~~ 106 (447)
T 4eiy_A 29 MGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHGCLFIA 106 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHH--TTCEEEHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccCccHHHHHH
Confidence 3456788899999999999999999999999999999999999999999999999999887744 36777889999998
Q ss_pred HHHH---------HHHHHHHHHHHHHhccccccccceeeeeeeehhHHHHHHHHHHHhhccccceee
Q psy2912 156 YSQV---------IFIMYLDYYNTMIKLTNRKQSKYIHKKTIGTFLCKEESFLTTGISLYPKSSYYM 213 (232)
Q Consensus 156 ~~~~---------~~~iaidRy~aI~~P~~~~~~~~~~~~~~~~~~~~~iw~~~~~~~~~p~~~~~~ 213 (232)
++.. +++||+|||++|++|++|+...+. +.+..++.++|++++++++||+++|..
T Consensus 107 ~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~---~~~~~~i~~~Wi~s~~~~~~~~~~~~~ 170 (447)
T 4eiy_A 107 CFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTG---TRAKGIIAICWVLSFAIGLTPMLGWNN 170 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCH---HHHHHHHHHHHHHHHHHHTGGGGTCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHeEEecccccchhhhH---HHHHHHHhHHHHHHHHHHHhhhheecc
Confidence 7754 348999999999999988766533 344566678899999999999998765
No 16
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.87 E-value=1.7e-22 Score=177.72 Aligned_cols=132 Identities=23% Similarity=0.312 Sum_probs=112.2
Q ss_pred hHHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCcchhhHHHHHHHHHHHHHhhhhhHHHHHhhccceeccccccchhhHH
Q psy2912 78 EWVLIALQSIVFVVGLIGNALVCIAVYRNKSMRTVTNYYIVNLAVADFLVILICLPPTVVWDVTETWFMGLVLCRVVLYS 157 (232)
Q Consensus 78 ~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~l~~~~~~~i~nLa~aDll~~l~~~p~~i~~~~~~~w~~~~~~C~~~~~~ 157 (232)
..++.+++.+++++|++||+++++++.+++++|++.|+|+.|||++|++.+++.+|..+.....+.|.+|...|++..++
T Consensus 8 ~~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~ 87 (452)
T 3rze_A 8 LMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLSM 87 (452)
T ss_dssp -CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHHHHH
Confidence 45667889999999999999999999999999999999999999999999999999999998889999999999999887
Q ss_pred HH---------HHHHHHHHHHHHHhccccccccceeeeeeeehhHHHHHHHHHHHhhccccceee
Q psy2912 158 QV---------IFIMYLDYYNTMIKLTNRKQSKYIHKKTIGTFLCKEESFLTTGISLYPKSSYYM 213 (232)
Q Consensus 158 ~~---------~~~iaidRy~aI~~P~~~~~~~~~~~~~~~~~~~~~iw~~~~~~~~~p~~~~~~ 213 (232)
.. +++||+|||++|++|++|+...+.+ .+..++.++|++++++++| .++|..
T Consensus 88 ~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~---~~~~~i~~~W~~~~~~~~p-~~~~~~ 148 (452)
T 3rze_A 88 DYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKT---RASATILGAWFLSFLWVIP-ILGWNH 148 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHH---HHHHHHHHHHHHHGGGHHH-HHCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHheeCccccccccchh---HHHHHHHHHHHHHHHHHHH-HHHHHh
Confidence 64 3489999999999999987765443 3456667889888777665 555544
No 17
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.86 E-value=1.5e-22 Score=169.32 Aligned_cols=132 Identities=23% Similarity=0.289 Sum_probs=113.8
Q ss_pred hhHHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCcchhhHHHHHHHHHHHHHhhhhhHHHHHhhccceeccccccchhhH
Q psy2912 77 SEWVLIALQSIVFVVGLIGNALVCIAVYRNKSMRTVTNYYIVNLAVADFLVILICLPPTVVWDVTETWFMGLVLCRVVLY 156 (232)
Q Consensus 77 ~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~l~~~~~~~i~nLa~aDll~~l~~~p~~i~~~~~~~w~~~~~~C~~~~~ 156 (232)
......+++.+++++|++||+++++++.++|++|+++|+++.|||++|++.+++.+|..+.....+.|.+|+..|++..+
T Consensus 10 ~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 89 (315)
T 4amj_A 10 WEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTS 89 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHHHHHHH
Confidence 34677889999999999999999999999999999999999999999999998899999988888899999999999987
Q ss_pred HHH---------HHHHHHHHHHHHHhccccccccceeeeeeeehhHHHHHHHHHHHhhccccce
Q psy2912 157 SQV---------IFIMYLDYYNTMIKLTNRKQSKYIHKKTIGTFLCKEESFLTTGISLYPKSSY 211 (232)
Q Consensus 157 ~~~---------~~~iaidRy~aI~~P~~~~~~~~~~~~~~~~~~~~~iw~~~~~~~~~p~~~~ 211 (232)
+.. +++||+|||+||++|+++++..+++ .+..++.++|+++.+++++|.+..
T Consensus 90 ~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~---~~~~~i~~~W~~~~~~~~~~~~~~ 150 (315)
T 4amj_A 90 LDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRA---RAKVIICTVWAISALVSFLPIMMH 150 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHH---HHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccccccccchh---hHHHhhhHHHHHHHHHHHHHHHHH
Confidence 654 3489999999999999887655333 345566688999999998888753
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.85 E-value=2.7e-22 Score=180.45 Aligned_cols=137 Identities=21% Similarity=0.275 Sum_probs=115.8
Q ss_pred CCchhHHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCcchhhHHHHHHHHHHHHHhhhhhHHHHHhhccceeccccccch
Q psy2912 74 PTSSEWVLIALQSIVFVVGLIGNALVCIAVYRNKSMRTVTNYYIVNLAVADFLVILICLPPTVVWDVTETWFMGLVLCRV 153 (232)
Q Consensus 74 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~l~~~~~~~i~nLa~aDll~~l~~~p~~i~~~~~~~w~~~~~~C~~ 153 (232)
+.....+..+++.+++++|++||+++++++.++|++|++.|++++|||++|++.+++.+|..+.....+.|.+|...|++
T Consensus 178 ~~~~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~ 257 (514)
T 3sn6_R 178 DEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWCEF 257 (514)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchhhh
Confidence 34455678889999999999999999999999999999999999999999999999999999998888899999999999
Q ss_pred hhHHHH---------HHHHHHHHHHHHHhccccccccceeeeeeeehhHHHHHHHHHHHhhccc-cceee
Q psy2912 154 VLYSQV---------IFIMYLDYYNTMIKLTNRKQSKYIHKKTIGTFLCKEESFLTTGISLYPK-SSYYM 213 (232)
Q Consensus 154 ~~~~~~---------~~~iaidRy~aI~~P~~~~~~~~~~~~~~~~~~~~~iw~~~~~~~~~p~-~~~~~ 213 (232)
..++.. +++||+|||++|++|++|+...+. +.+..++.++|+++++++++|. ++|..
T Consensus 258 ~~~l~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~---~~~~~~i~~~Wi~s~l~~~~p~~~~~~~ 324 (514)
T 3sn6_R 258 WTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTK---NKARVIILMVWIVSGLTSFLPIQMHWYR 324 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCH---HHHHHHHHHHHHHHHHTTHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccchhccc---hHHHHHHHHHHHHHHHHHhhhhhcccee
Confidence 987664 348999999999999988765533 3445667788999989887776 44543
No 19
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.30 E-value=3e-07 Score=50.43 Aligned_cols=27 Identities=11% Similarity=0.092 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHHhccccccccce
Q psy2912 157 SQVIFIMYLDYYNTMIKLTNRKQSKYI 183 (232)
Q Consensus 157 ~~~~~~iaidRy~aI~~P~~~~~~~~~ 183 (232)
+..+++||+|||+||++|+++...++.
T Consensus 4 i~~L~~is~dRy~aI~~Pl~~~~~~t~ 30 (32)
T 1hll_A 4 IVHLCAISLDRYWSITQAIEYNLKRTP 30 (32)
T ss_dssp HHHHHHHHTHHHHHHHHHHGGGSSCCC
T ss_pred HHHHHHHHHHHHHHhhhhhhcccccCC
Confidence 456779999999999999998766543
No 20
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=96.92 E-value=3e-05 Score=49.21 Aligned_cols=30 Identities=37% Similarity=0.639 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhccCCC
Q psy2912 80 VLIALQSIVFVVGLIGNALVCIAVYRNKSM 109 (232)
Q Consensus 80 ~~~~~~~~i~~~gi~gN~lvi~~~~~~~~l 109 (232)
+..++|.+++++|++||++|++++.++|.-
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~~ 59 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKGH 59 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEeccc
Confidence 567899999999999999999999888753
No 21
>3arc_I Photosystem II reaction center protein I; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_I* 2axt_I* 3bz1_I* 3bz2_I* 3kzi_I* 3prq_I* 3prr_I* 3a0b_I* 3a0h_I*
Probab=24.94 E-value=72 Score=17.31 Aligned_cols=17 Identities=18% Similarity=0.673 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHHhhhh
Q psy2912 80 VLIALQSIVFVVGLIGN 96 (232)
Q Consensus 80 ~~~~~~~~i~~~gi~gN 96 (232)
...++++.++++|.+.|
T Consensus 10 ~vV~ffvsLFiFGfLsn 26 (38)
T 3arc_I 10 IVVTFFVLLFVFGFLSG 26 (38)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHccccCC
Confidence 44556777777777766
No 22
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=24.23 E-value=1e+02 Score=17.37 Aligned_cols=9 Identities=33% Similarity=0.250 Sum_probs=4.1
Q ss_pred hhhhhccCC
Q psy2912 100 CIAVYRNKS 108 (232)
Q Consensus 100 i~~~~~~~~ 108 (232)
++.++|+|+
T Consensus 30 ~~~~~RRRr 38 (44)
T 2l2t_A 30 FAVYVRRKS 38 (44)
T ss_dssp HHHHHHTTC
T ss_pred HHHHhhhhh
Confidence 344445444
Done!