Your job contains 1 sequence.
>psy2915
MTDSKYFTTTKKGEIFELKGELNSDKKEKKREAVKKVIASMTVGKDVSALFPDVVNCMQT
DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQKSSSSFQCMIDIRSIPLFDLCSSVGV
FVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYD
INAQLVEDQGFLDQLKDLLSDSNPMVVANAVAAILLLPRKSYWQRNLSSRKKQICWNLPY
LMNLSVIYPAWPLSTINPHTPLLKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPE
VQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLSE
LKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKYAERIDNADELLESF
LEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQDSDNPDLRDRGFIYWRL
LSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSH
PDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKT
AAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEM
NAQTINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSA
VKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKH
EMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETI
ISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFLE
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2915
(883 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E2RRJ6 - symbol:AP1B1 "Uncharacterized protein"... 1437 2.1e-180 2
UNIPROTKB|F1RFI2 - symbol:AP1B1 "Uncharacterized protein"... 1437 2.1e-180 2
UNIPROTKB|I3LV02 - symbol:AP1B1 "Uncharacterized protein"... 1437 2.1e-180 2
UNIPROTKB|F1MIF2 - symbol:AP1B1 "Uncharacterized protein"... 1436 2.7e-180 2
MGI|MGI:1096368 - symbol:Ap1b1 "adaptor protein complex A... 1436 2.7e-180 2
UNIPROTKB|C9J1E7 - symbol:AP1B1 "AP-1 complex subunit bet... 1435 3.4e-180 2
UNIPROTKB|Q10567 - symbol:AP1B1 "AP-1 complex subunit bet... 1435 3.4e-180 2
UNIPROTKB|F1NCI1 - symbol:AP1B1 "Uncharacterized protein"... 1435 3.4e-180 2
UNIPROTKB|F1NCR9 - symbol:AP1B1 "Uncharacterized protein"... 1435 3.4e-180 2
RGD|2064 - symbol:Ap1b1 "adaptor-related protein complex ... 1415 9.2e-178 2
UNIPROTKB|P52303 - symbol:Ap1b1 "AP-1 complex subunit bet... 1415 9.2e-178 2
FB|FBgn0010380 - symbol:AP-1-2beta "Adaptor Protein compl... 1511 5.6e-155 1
DICTYBASE|DDB_G0279141 - symbol:ap1b1 "beta adaptin" spec... 1177 2.2e-150 2
ZFIN|ZDB-GENE-061025-1 - symbol:ap1b1 "adaptor-related pr... 1440 1.9e-147 1
UNIPROTKB|P63009 - symbol:AP2B1 "AP-2 complex subunit bet... 1416 6.6e-145 1
UNIPROTKB|Q08DS7 - symbol:AP2B1 "AP-1 complex subunit bet... 1416 6.6e-145 1
UNIPROTKB|G3X7G4 - symbol:AP2B1 "AP-2 complex subunit bet... 1416 6.6e-145 1
UNIPROTKB|F1S182 - symbol:LOC100517121 "Uncharacterized p... 1415 8.4e-145 1
UNIPROTKB|I3L6Y6 - symbol:AP2B1 "Uncharacterized protein"... 1415 8.4e-145 1
UNIPROTKB|E2RIV1 - symbol:AP2B1 "Uncharacterized protein"... 1413 1.4e-144 1
UNIPROTKB|P63010 - symbol:AP2B1 "AP-2 complex subunit bet... 1413 1.4e-144 1
MGI|MGI:1919020 - symbol:Ap2b1 "adaptor-related protein c... 1413 1.4e-144 1
RGD|71048 - symbol:Ap2b1 "adaptor-related protein complex... 1413 1.4e-144 1
UNIPROTKB|E1BXC1 - symbol:AP2B1 "Uncharacterized protein"... 1413 1.4e-144 1
UNIPROTKB|E1BY12 - symbol:AP2B1 "Uncharacterized protein"... 1413 1.4e-144 1
ZFIN|ZDB-GENE-030131-6564 - symbol:ap2b1 "adaptor-related... 1407 5.9e-144 1
WB|WBGene00000160 - symbol:apb-1 species:6239 "Caenorhabd... 1372 3.0e-140 1
UNIPROTKB|Q7Z451 - symbol:AP2B1 "AP-2 complex subunit bet... 1314 4.2e-134 1
TAIR|locus:2117924 - symbol:AT4G23460 species:3702 "Arabi... 1247 5.3e-127 1
UNIPROTKB|G4N974 - symbol:MGG_03320 "AP-1 complex subunit... 997 1.2e-109 4
GENEDB_PFALCIPARUM|PFE1400c - symbol:PFE1400c "beta adapt... 1063 1.7e-107 1
UNIPROTKB|Q8I3I6 - symbol:PFE1400c "Beta adaptin protein,... 1063 1.7e-107 1
ASPGD|ASPL0000034670 - symbol:AN3029 species:162425 "Emer... 990 9.1e-100 1
UNIPROTKB|K7EJT8 - symbol:AP2B1 "AP-2 complex subunit bet... 949 2.0e-95 1
POMBASE|SPBC947.02 - symbol:apl2 "AP-1 adaptor complex su... 934 7.8e-94 1
CGD|CAL0003949 - symbol:APL2 species:5476 "Candida albica... 927 4.3e-93 1
UNIPROTKB|Q5AEN7 - symbol:APL2 "Potential clathrin-associ... 927 4.3e-93 1
SGD|S000001618 - symbol:APL2 "Beta-adaptin subunit of the... 850 6.2e-85 1
UNIPROTKB|G4NIQ6 - symbol:MGG_04150 "AP-2 complex subunit... 791 1.1e-78 1
ASPGD|ASPL0000003399 - symbol:AN5950 species:162425 "Emer... 761 1.7e-75 1
POMBASE|SPBC2G2.06c - symbol:apl1 "AP-2 adaptor complex s... 664 3.2e-65 1
UNIPROTKB|K7ERB2 - symbol:AP2B1 "AP-2 complex subunit bet... 570 2.5e-61 2
UNIPROTKB|K7EN71 - symbol:AP2B1 "AP-2 complex subunit bet... 476 2.0e-51 2
DICTYBASE|DDB_G0283319 - symbol:ap4b1 "adaptor-related pr... 523 2.3e-51 2
UNIPROTKB|K7EJ01 - symbol:AP2B1 "AP-2 complex subunit bet... 331 4.6e-51 2
UNIPROTKB|H7C034 - symbol:AP1B1 "AP-1 complex subunit bet... 283 1.6e-50 3
CGD|CAL0003766 - symbol:orf19.7212 species:5476 "Candida ... 472 1.2e-44 3
UNIPROTKB|Q59ZX9 - symbol:APL1 "Potential clathrin-associ... 472 1.2e-44 3
UNIPROTKB|Q9Y6B7 - symbol:AP4B1 "AP-4 complex subunit bet... 494 1.2e-44 1
UNIPROTKB|F6PZ41 - symbol:AP4B1 "Uncharacterized protein"... 483 2.3e-43 1
UNIPROTKB|F1SBR2 - symbol:AP4B1 "Uncharacterized protein"... 482 3.0e-43 1
UNIPROTKB|F1PTH0 - symbol:AP4B1 "Uncharacterized protein"... 484 5.3e-43 1
RGD|1310529 - symbol:Ap4b1 "adaptor-related protein compl... 479 6.8e-43 1
MGI|MGI:1337130 - symbol:Ap4b1 "adaptor-related protein c... 478 8.8e-43 1
ZFIN|ZDB-GENE-040426-1284 - symbol:ap4b1 "adaptor-related... 476 1.3e-42 1
DICTYBASE|DDB_G0274003 - symbol:ap3b-2 "beta adaptin" spe... 329 1.2e-41 3
DICTYBASE|DDB_G0272578 - symbol:ap3b-1 "beta adaptin" spe... 329 1.2e-41 3
UNIPROTKB|F1NLK7 - symbol:AP4B1 "Uncharacterized protein"... 418 6.1e-41 2
GENEDB_PFALCIPARUM|MAL7P1.164 - symbol:MAL7P1.164 "adapte... 464 7.5e-41 1
UNIPROTKB|Q8IBF8 - symbol:MAL7P1.164 "Adapter-related pro... 464 7.5e-41 1
RGD|1308950 - symbol:Ap3b2 "adaptor-related protein compl... 318 1.4e-40 3
MGI|MGI:1100869 - symbol:Ap3b2 "adaptor-related protein c... 318 1.4e-40 3
UNIPROTKB|Q13367 - symbol:AP3B2 "AP-3 complex subunit bet... 318 1.4e-40 3
UNIPROTKB|F1RI97 - symbol:F1RI97 "Uncharacterized protein... 318 1.4e-40 3
UNIPROTKB|F1P7W8 - symbol:AP3B2 "Uncharacterized protein"... 318 1.4e-40 3
UNIPROTKB|E1BME2 - symbol:AP3B2 "Uncharacterized protein"... 318 1.4e-40 3
UNIPROTKB|B7ZKS0 - symbol:AP3B2 "AP-3 complex subunit bet... 318 1.5e-40 3
UNIPROTKB|J9P1J6 - symbol:AP3B2 "Uncharacterized protein"... 318 1.6e-40 3
UNIPROTKB|E1BW97 - symbol:AP3B1 "Uncharacterized protein"... 306 2.4e-40 3
UNIPROTKB|F1S2G1 - symbol:F1S2G1 "Uncharacterized protein... 302 8.8e-40 3
UNIPROTKB|Q7YRF1 - symbol:AP3B1 "AP-3 complex subunit bet... 303 1.3e-39 3
FB|FBgn0003210 - symbol:rb "ruby" species:7227 "Drosophil... 321 1.4e-39 3
UNIPROTKB|F1PVY2 - symbol:AP3B1 "AP-3 complex subunit bet... 303 3.3e-39 3
UNIPROTKB|E5RJ68 - symbol:AP3B1 "AP-3 complex subunit bet... 303 5.6e-39 3
UNIPROTKB|O00203 - symbol:AP3B1 "AP-3 complex subunit bet... 303 6.9e-39 3
RGD|1310256 - symbol:Ap3b1 "adaptor-related protein compl... 303 8.9e-39 3
MGI|MGI:1333879 - symbol:Ap3b1 "adaptor-related protein c... 303 1.2e-38 3
UNIPROTKB|Q32PG1 - symbol:AP3B1 "AP-3 complex subunit bet... 302 2.8e-38 3
SGD|S000003765 - symbol:APL1 "Beta-adaptin" species:4932 ... 306 1.1e-34 2
UNIPROTKB|B1ALD2 - symbol:AP4B1 "AP-4 complex subunit bet... 378 6.5e-34 1
UNIPROTKB|F1NY63 - symbol:AP3B2 "Uncharacterized protein"... 317 1.3e-31 2
POMBASE|SPAC23H3.06 - symbol:apl6 "AP-3 adaptor complex s... 365 3.4e-31 2
UNIPROTKB|B7ZKR7 - symbol:AP3B2 "AP3B2 protein" species:9... 220 2.9e-30 3
TAIR|locus:2099961 - symbol:PAT2 "protein affected traf&#... 306 5.0e-30 2
UNIPROTKB|B7Z4X3 - symbol:AP4B1 "AP-4 complex subunit bet... 205 2.4e-29 2
WB|WBGene00000163 - symbol:apb-3 species:6239 "Caenorhabd... 349 4.0e-28 1
ASPGD|ASPL0000055849 - symbol:AN0165 species:162425 "Emer... 263 7.2e-28 3
UNIPROTKB|I3LRS3 - symbol:I3LRS3 "Uncharacterized protein... 316 2.9e-26 2
UNIPROTKB|B1ALD1 - symbol:AP4B1 "AP-4 complex subunit bet... 306 3.6e-26 1
UNIPROTKB|K7EJX1 - symbol:AP2B1 "AP-2 complex subunit bet... 306 3.6e-26 1
UNIPROTKB|F5GWU4 - symbol:AP3B2 "AP-3 complex subunit bet... 301 1.2e-25 1
CGD|CAL0003756 - symbol:orf19.1323 species:5476 "Candida ... 281 1.5e-23 2
UNIPROTKB|Q59TL3 - symbol:APL6 "Potential clathrin-associ... 281 1.5e-23 2
UNIPROTKB|D4A3Q4 - symbol:Ap4b1 "Protein Ap4b1" species:1... 300 4.1e-23 1
SGD|S000003493 - symbol:APL6 "Beta3-like subunit of the y... 221 1.1e-18 3
GENEDB_PFALCIPARUM|PFF0655c - symbol:PFF0655c "adapter-re... 226 9.0e-17 3
UNIPROTKB|C6KSX7 - symbol:PFF0655c "Adapter-related prote... 226 9.0e-17 3
UNIPROTKB|B1ALD0 - symbol:AP4B1 "AP-4 complex subunit bet... 190 1.6e-15 2
UNIPROTKB|F1NY20 - symbol:AP4B1 "Uncharacterized protein"... 179 7.7e-15 2
UNIPROTKB|B1ALD3 - symbol:AP4B1 "AP-4 complex subunit bet... 168 2.2e-11 1
WARNING: Descriptions of 72 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|E2RRJ6 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 OMA:PGNPSCT GeneTree:ENSGT00530000063138
EMBL:AAEX03014791 EMBL:AAEX03014790 ProteinModelPortal:E2RRJ6
Ensembl:ENSCAFT00000019193 NextBio:20860135 Uniprot:E2RRJ6
Length = 939
Score = 1437 (510.9 bits), Expect = 2.1e-180, Sum P(2) = 2.1e-180
Identities = 288/337 (85%), Positives = 309/337 (91%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVNTFVKDCE
Sbjct: 37 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCE 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINAQLV
Sbjct: 97 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLV 156
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
EDQGFLD LKDL+SDSNPMVVANAVAALSE+ E+ S L+++N Q+INKLLTALNECT
Sbjct: 157 EDQGFLDTLKDLISDSNPMVVANAVAALSEIAESHPSS-NLLDLNPQSINKLLTALNECT 215
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQ+FILD L+NY+PKDDREAQSICER+TPRL+HAN+AVVLSAVKVLMK MEML + D
Sbjct: 216 EWGQIFILDCLANYTPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLD 275
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ TL KKLAPPLVTLLS+EPE+QYVALRNINLIVQKRP+ILKHEMKVFFVKYNDPIYVK
Sbjct: 276 YYGTLLKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVK 335
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
LEKLDIMIRLASQANIAQV ++E A V D RK
Sbjct: 336 LEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRK 372
Score = 602 (217.0 bits), Expect = 2.9e-98, Sum P(2) = 2.9e-98
Identities = 143/258 (55%), Positives = 172/258 (66%)
Query: 278 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYV 337
D+ TL KKLAPPLVTLLS+EPE+QYVALRNINLIVQKRP+ILKHEMKVFFVKYNDPIYV
Sbjct: 275 DYYGTLLKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYV 334
Query: 338 KLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 397
KLEKLDIMIRLASQANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST
Sbjct: 335 KLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 394
Query: 398 LLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQV 457
LLDLIQTK + A +++ + ++ V L + L P ++ V
Sbjct: 395 LLDLIQTKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSL--DEPEARAAMIWIV 452
Query: 458 LSLATQDSDNPDLRDRGFIY-WRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVN 516
A + DN D F+ + ST +L + +L + T + L V++
Sbjct: 453 GEYAER-IDNADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPT---ETQELVQQVLS 508
Query: 517 C--MQTDNLELKKLVYLY 532
+DN +L+ Y+Y
Sbjct: 509 LATQDSDNPDLRDRGYIY 526
Score = 432 (157.1 bits), Expect = 2.9e-98, Sum P(2) = 2.9e-98
Identities = 82/89 (92%), Positives = 85/89 (95%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 87 AVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 146
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KL+DINAQLVEDQGFLD LKDL+SDSNPM
Sbjct: 147 KLHDINAQLVEDQGFLDTLKDLISDSNPM 175
Score = 381 (139.2 bits), Expect = 3.6e-72, Sum P(2) = 3.6e-72
Identities = 74/79 (93%), Positives = 79/79 (100%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESFLEGFHDE+TQVQLQLLTAIVKLFLK+PT+TQELVQQVLSLATQD
Sbjct: 454 EYAERIDNADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQD 513
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRG+IYWRLLST
Sbjct: 514 SDNPDLRDRGYIYWRLLST 532
Score = 376 (137.4 bits), Expect = 3.9e-61, Sum P(2) = 3.9e-61
Identities = 89/187 (47%), Positives = 115/187 (61%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTTTKKGEIFELK ELNSD IASMTVGKDVSALFPDVVNCMQT
Sbjct: 1 MTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLFDLCS 116
DNLELKKLVYLYLMNYAKS PDMAIMA +TF + + + +R+ I + +
Sbjct: 61 DNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITE 120
Query: 117 SVGVFVKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTA 171
+ ++ C +D +P +R A+ V + I + + + L+ + D +P V A
Sbjct: 121 YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANA 180
Query: 172 AVCVAKL 178
++++
Sbjct: 181 VAALSEI 187
Score = 336 (123.3 bits), Expect = 2.1e-180, Sum P(2) = 2.1e-180
Identities = 63/70 (90%), Positives = 70/70 (100%)
Query: 814 QVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDN 873
+VNYVVQEAIVVIKDIFRKYPNKYE++I+TLCENLD+LDEPEARA+MIWI+GEYAERIDN
Sbjct: 402 KVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDN 461
Query: 874 ADELLESFLE 883
ADELLESFLE
Sbjct: 462 ADELLESFLE 471
Score = 60 (26.2 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 55/253 (21%), Positives = 102/253 (40%)
Query: 558 SNPLIRALAVRTMGCIRVDKITEYLCEPLRKC-LKDEDP-YVRKTAAVCVAKLYDINAQL 615
+ P ++ +A+R + I V K E L ++ +K DP YV+ + +L A +
Sbjct: 294 AEPELQYVALRNINLI-VQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLAS-QANI 351
Query: 616 VEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLL-TALNE 674
+ L +LK+ ++ + V AV A+ + E T+ L+ T +N
Sbjct: 352 AQ---VLAELKEYATEVDVDFVRKAVRAIGR---CAIKVEQSAERCVSTLLDLIQTKVNY 405
Query: 675 CTEWGQVFILDSLSNYSPKDDREAQSICERITPR-LAHANAAVV------LSAVKVLMKL 727
+ V I D Y K + ++CE + A AA++ + +L
Sbjct: 406 VVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADEL 465
Query: 728 ME-MLPGEGDFVSTLTKKLAPPLVTLLSSEP-EVQYVALRNINLIVQK--RPDILKHEMK 783
+E L G D + + +L +V L +P E Q + + ++L Q PD+
Sbjct: 466 LESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGYI 525
Query: 784 VFFVKYNDPIYVK 796
+ + DP+ K
Sbjct: 526 YWRLLSTDPVAAK 538
Score = 42 (19.8 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 24/99 (24%), Positives = 40/99 (40%)
Query: 708 RLA-HANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVAL-- 764
RLA AN A VL+ +K +++ DFV + + + + S L
Sbjct: 344 RLASQANIAQVLAELKEYATEVDV-----DFVRKAVRAIGRCAIKVEQSAERCVSTLLDL 398
Query: 765 --RNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLD 801
+N +VQ+ ++K + + KY I E LD
Sbjct: 399 IQTKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLD 437
>UNIPROTKB|F1RFI2 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
EMBL:CU640468 Ensembl:ENSSSCT00000010934 Uniprot:F1RFI2
Length = 947
Score = 1437 (510.9 bits), Expect = 2.1e-180, Sum P(2) = 2.1e-180
Identities = 288/337 (85%), Positives = 309/337 (91%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVNTFVKDCE
Sbjct: 37 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCE 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINAQLV
Sbjct: 97 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLV 156
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
EDQGFLD LKDL+SDSNPMVVANAVAALSE+ E+ S L+++N Q+INKLLTALNECT
Sbjct: 157 EDQGFLDTLKDLISDSNPMVVANAVAALSEIAESHPSS-NLLDLNPQSINKLLTALNECT 215
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQ+FILD L+NY+PKDDREAQSICER+TPRL+HAN+AVVLSAVKVLMK MEML + D
Sbjct: 216 EWGQIFILDCLANYTPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLD 275
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ TL KKLAPPLVTLLS+EPE+QYVALRNINLIVQKRP+ILKHEMKVFFVKYNDPIYVK
Sbjct: 276 YYGTLLKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVK 335
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
LEKLDIMIRLASQANIAQV ++E A V D RK
Sbjct: 336 LEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRK 372
Score = 602 (217.0 bits), Expect = 3.3e-98, Sum P(2) = 3.3e-98
Identities = 143/258 (55%), Positives = 172/258 (66%)
Query: 278 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYV 337
D+ TL KKLAPPLVTLLS+EPE+QYVALRNINLIVQKRP+ILKHEMKVFFVKYNDPIYV
Sbjct: 275 DYYGTLLKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYV 334
Query: 338 KLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 397
KLEKLDIMIRLASQANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST
Sbjct: 335 KLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 394
Query: 398 LLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQV 457
LLDLIQTK + A +++ + ++ V L + L P ++ V
Sbjct: 395 LLDLIQTKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSL--DEPEARAAMIWIV 452
Query: 458 LSLATQDSDNPDLRDRGFIY-WRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVN 516
A + DN D F+ + ST +L + +L + T + L V++
Sbjct: 453 GEYAER-IDNADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPT---ETQELVQQVLS 508
Query: 517 C--MQTDNLELKKLVYLY 532
+DN +L+ Y+Y
Sbjct: 509 LATQDSDNPDLRDRGYIY 526
Score = 432 (157.1 bits), Expect = 3.3e-98, Sum P(2) = 3.3e-98
Identities = 82/89 (92%), Positives = 85/89 (95%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 87 AVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 146
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KL+DINAQLVEDQGFLD LKDL+SDSNPM
Sbjct: 147 KLHDINAQLVEDQGFLDTLKDLISDSNPM 175
Score = 381 (139.2 bits), Expect = 3.8e-72, Sum P(2) = 3.8e-72
Identities = 74/79 (93%), Positives = 79/79 (100%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESFLEGFHDE+TQVQLQLLTAIVKLFLK+PT+TQELVQQVLSLATQD
Sbjct: 454 EYAERIDNADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQD 513
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRG+IYWRLLST
Sbjct: 514 SDNPDLRDRGYIYWRLLST 532
Score = 376 (137.4 bits), Expect = 4.0e-61, Sum P(2) = 4.0e-61
Identities = 89/187 (47%), Positives = 115/187 (61%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTTTKKGEIFELK ELNSD IASMTVGKDVSALFPDVVNCMQT
Sbjct: 1 MTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLFDLCS 116
DNLELKKLVYLYLMNYAKS PDMAIMA +TF + + + +R+ I + +
Sbjct: 61 DNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITE 120
Query: 117 SVGVFVKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTA 171
+ ++ C +D +P +R A+ V + I + + + L+ + D +P V A
Sbjct: 121 YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANA 180
Query: 172 AVCVAKL 178
++++
Sbjct: 181 VAALSEI 187
Score = 336 (123.3 bits), Expect = 2.1e-180, Sum P(2) = 2.1e-180
Identities = 63/70 (90%), Positives = 70/70 (100%)
Query: 814 QVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDN 873
+VNYVVQEAIVVIKDIFRKYPNKYE++I+TLCENLD+LDEPEARA+MIWI+GEYAERIDN
Sbjct: 402 KVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDN 461
Query: 874 ADELLESFLE 883
ADELLESFLE
Sbjct: 462 ADELLESFLE 471
Score = 60 (26.2 bits), Expect = 2.3e-38, Sum P(2) = 2.3e-38
Identities = 55/253 (21%), Positives = 102/253 (40%)
Query: 558 SNPLIRALAVRTMGCIRVDKITEYLCEPLRKC-LKDEDP-YVRKTAAVCVAKLYDINAQL 615
+ P ++ +A+R + I V K E L ++ +K DP YV+ + +L A +
Sbjct: 294 AEPELQYVALRNINLI-VQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLAS-QANI 351
Query: 616 VEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLL-TALNE 674
+ L +LK+ ++ + V AV A+ + E T+ L+ T +N
Sbjct: 352 AQ---VLAELKEYATEVDVDFVRKAVRAIGR---CAIKVEQSAERCVSTLLDLIQTKVNY 405
Query: 675 CTEWGQVFILDSLSNYSPKDDREAQSICERITPR-LAHANAAVV------LSAVKVLMKL 727
+ V I D Y K + ++CE + A AA++ + +L
Sbjct: 406 VVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADEL 465
Query: 728 ME-MLPGEGDFVSTLTKKLAPPLVTLLSSEP-EVQYVALRNINLIVQK--RPDILKHEMK 783
+E L G D + + +L +V L +P E Q + + ++L Q PD+
Sbjct: 466 LESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGYI 525
Query: 784 VFFVKYNDPIYVK 796
+ + DP+ K
Sbjct: 526 YWRLLSTDPVAAK 538
Score = 42 (19.8 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 24/99 (24%), Positives = 40/99 (40%)
Query: 708 RLA-HANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVAL-- 764
RLA AN A VL+ +K +++ DFV + + + + S L
Sbjct: 344 RLASQANIAQVLAELKEYATEVDV-----DFVRKAVRAIGRCAIKVEQSAERCVSTLLDL 398
Query: 765 --RNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLD 801
+N +VQ+ ++K + + KY I E LD
Sbjct: 399 IQTKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLD 437
>UNIPROTKB|I3LV02 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:KECENAD EMBL:CU640468 Ensembl:ENSSSCT00000028355 Uniprot:I3LV02
Length = 949
Score = 1437 (510.9 bits), Expect = 2.1e-180, Sum P(2) = 2.1e-180
Identities = 288/337 (85%), Positives = 309/337 (91%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVNTFVKDCE
Sbjct: 37 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCE 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINAQLV
Sbjct: 97 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLV 156
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
EDQGFLD LKDL+SDSNPMVVANAVAALSE+ E+ S L+++N Q+INKLLTALNECT
Sbjct: 157 EDQGFLDTLKDLISDSNPMVVANAVAALSEIAESHPSS-NLLDLNPQSINKLLTALNECT 215
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQ+FILD L+NY+PKDDREAQSICER+TPRL+HAN+AVVLSAVKVLMK MEML + D
Sbjct: 216 EWGQIFILDCLANYTPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLD 275
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ TL KKLAPPLVTLLS+EPE+QYVALRNINLIVQKRP+ILKHEMKVFFVKYNDPIYVK
Sbjct: 276 YYGTLLKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVK 335
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
LEKLDIMIRLASQANIAQV ++E A V D RK
Sbjct: 336 LEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRK 372
Score = 602 (217.0 bits), Expect = 3.4e-98, Sum P(2) = 3.4e-98
Identities = 143/258 (55%), Positives = 172/258 (66%)
Query: 278 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYV 337
D+ TL KKLAPPLVTLLS+EPE+QYVALRNINLIVQKRP+ILKHEMKVFFVKYNDPIYV
Sbjct: 275 DYYGTLLKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYV 334
Query: 338 KLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 397
KLEKLDIMIRLASQANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST
Sbjct: 335 KLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 394
Query: 398 LLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQV 457
LLDLIQTK + A +++ + ++ V L + L P ++ V
Sbjct: 395 LLDLIQTKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSL--DEPEARAAMIWIV 452
Query: 458 LSLATQDSDNPDLRDRGFIY-WRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVN 516
A + DN D F+ + ST +L + +L + T + L V++
Sbjct: 453 GEYAER-IDNADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPT---ETQELVQQVLS 508
Query: 517 C--MQTDNLELKKLVYLY 532
+DN +L+ Y+Y
Sbjct: 509 LATQDSDNPDLRDRGYIY 526
Score = 432 (157.1 bits), Expect = 3.4e-98, Sum P(2) = 3.4e-98
Identities = 82/89 (92%), Positives = 85/89 (95%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 87 AVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 146
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KL+DINAQLVEDQGFLD LKDL+SDSNPM
Sbjct: 147 KLHDINAQLVEDQGFLDTLKDLISDSNPM 175
Score = 381 (139.2 bits), Expect = 3.8e-72, Sum P(2) = 3.8e-72
Identities = 74/79 (93%), Positives = 79/79 (100%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESFLEGFHDE+TQVQLQLLTAIVKLFLK+PT+TQELVQQVLSLATQD
Sbjct: 454 EYAERIDNADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQD 513
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRG+IYWRLLST
Sbjct: 514 SDNPDLRDRGYIYWRLLST 532
Score = 376 (137.4 bits), Expect = 4.1e-61, Sum P(2) = 4.1e-61
Identities = 89/187 (47%), Positives = 115/187 (61%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTTTKKGEIFELK ELNSD IASMTVGKDVSALFPDVVNCMQT
Sbjct: 1 MTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLFDLCS 116
DNLELKKLVYLYLMNYAKS PDMAIMA +TF + + + +R+ I + +
Sbjct: 61 DNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITE 120
Query: 117 SVGVFVKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTA 171
+ ++ C +D +P +R A+ V + I + + + L+ + D +P V A
Sbjct: 121 YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANA 180
Query: 172 AVCVAKL 178
++++
Sbjct: 181 VAALSEI 187
Score = 336 (123.3 bits), Expect = 2.1e-180, Sum P(2) = 2.1e-180
Identities = 63/70 (90%), Positives = 70/70 (100%)
Query: 814 QVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDN 873
+VNYVVQEAIVVIKDIFRKYPNKYE++I+TLCENLD+LDEPEARA+MIWI+GEYAERIDN
Sbjct: 402 KVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDN 461
Query: 874 ADELLESFLE 883
ADELLESFLE
Sbjct: 462 ADELLESFLE 471
Score = 60 (26.2 bits), Expect = 2.3e-38, Sum P(2) = 2.3e-38
Identities = 55/253 (21%), Positives = 102/253 (40%)
Query: 558 SNPLIRALAVRTMGCIRVDKITEYLCEPLRKC-LKDEDP-YVRKTAAVCVAKLYDINAQL 615
+ P ++ +A+R + I V K E L ++ +K DP YV+ + +L A +
Sbjct: 294 AEPELQYVALRNINLI-VQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLAS-QANI 351
Query: 616 VEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLL-TALNE 674
+ L +LK+ ++ + V AV A+ + E T+ L+ T +N
Sbjct: 352 AQ---VLAELKEYATEVDVDFVRKAVRAIGR---CAIKVEQSAERCVSTLLDLIQTKVNY 405
Query: 675 CTEWGQVFILDSLSNYSPKDDREAQSICERITPR-LAHANAAVV------LSAVKVLMKL 727
+ V I D Y K + ++CE + A AA++ + +L
Sbjct: 406 VVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADEL 465
Query: 728 ME-MLPGEGDFVSTLTKKLAPPLVTLLSSEP-EVQYVALRNINLIVQK--RPDILKHEMK 783
+E L G D + + +L +V L +P E Q + + ++L Q PD+
Sbjct: 466 LESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGYI 525
Query: 784 VFFVKYNDPIYVK 796
+ + DP+ K
Sbjct: 526 YWRLLSTDPVAAK 538
Score = 42 (19.8 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 24/99 (24%), Positives = 40/99 (40%)
Query: 708 RLA-HANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVAL-- 764
RLA AN A VL+ +K +++ DFV + + + + S L
Sbjct: 344 RLASQANIAQVLAELKEYATEVDV-----DFVRKAVRAIGRCAIKVEQSAERCVSTLLDL 398
Query: 765 --RNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLD 801
+N +VQ+ ++K + + KY I E LD
Sbjct: 399 IQTKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLD 437
>UNIPROTKB|F1MIF2 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:KECENAD EMBL:DAAA02045602 IPI:IPI00690120 UniGene:Bt.35586
Ensembl:ENSBTAT00000001576 Uniprot:F1MIF2
Length = 946
Score = 1436 (510.6 bits), Expect = 2.7e-180, Sum P(2) = 2.7e-180
Identities = 287/337 (85%), Positives = 309/337 (91%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVNTFVKDCE
Sbjct: 37 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCE 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINAQLV
Sbjct: 97 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLV 156
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
EDQGFLD LKDL+SDSNPMVVANAVAALSE+ E+ S L+++N Q+INKLLTALNECT
Sbjct: 157 EDQGFLDTLKDLISDSNPMVVANAVAALSEIAESHPSS-NLLDLNPQSINKLLTALNECT 215
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQ+FILD L+NY+PKDDREAQSICER+TPRL+HAN+AVVLSAVKVLMK MEML + D
Sbjct: 216 EWGQIFILDCLANYTPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLD 275
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ TL KKLAPPLVTLLS+EPE+QYVALRNINLIVQKRP++LKHEMKVFFVKYNDPIYVK
Sbjct: 276 YYGTLLKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEVLKHEMKVFFVKYNDPIYVK 335
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
LEKLDIMIRLASQANIAQV ++E A V D RK
Sbjct: 336 LEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRK 372
Score = 601 (216.6 bits), Expect = 4.9e-98, Sum P(2) = 4.9e-98
Identities = 142/258 (55%), Positives = 172/258 (66%)
Query: 278 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYV 337
D+ TL KKLAPPLVTLLS+EPE+QYVALRNINLIVQKRP++LKHEMKVFFVKYNDPIYV
Sbjct: 275 DYYGTLLKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEVLKHEMKVFFVKYNDPIYV 334
Query: 338 KLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 397
KLEKLDIMIRLASQANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST
Sbjct: 335 KLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 394
Query: 398 LLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQV 457
LLDLIQTK + A +++ + ++ V L + L P ++ V
Sbjct: 395 LLDLIQTKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSL--DEPEARAAMIWIV 452
Query: 458 LSLATQDSDNPDLRDRGFIY-WRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVN 516
A + DN D F+ + ST +L + +L + T + L V++
Sbjct: 453 GEYAER-IDNADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPT---ETQELVQQVLS 508
Query: 517 C--MQTDNLELKKLVYLY 532
+DN +L+ Y+Y
Sbjct: 509 LATQDSDNPDLRDRGYIY 526
Score = 432 (157.1 bits), Expect = 4.9e-98, Sum P(2) = 4.9e-98
Identities = 82/89 (92%), Positives = 85/89 (95%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 87 AVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 146
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KL+DINAQLVEDQGFLD LKDL+SDSNPM
Sbjct: 147 KLHDINAQLVEDQGFLDTLKDLISDSNPM 175
Score = 381 (139.2 bits), Expect = 3.8e-72, Sum P(2) = 3.8e-72
Identities = 74/79 (93%), Positives = 79/79 (100%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESFLEGFHDE+TQVQLQLLTAIVKLFLK+PT+TQELVQQVLSLATQD
Sbjct: 454 EYAERIDNADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQD 513
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRG+IYWRLLST
Sbjct: 514 SDNPDLRDRGYIYWRLLST 532
Score = 376 (137.4 bits), Expect = 4.0e-61, Sum P(2) = 4.0e-61
Identities = 89/187 (47%), Positives = 115/187 (61%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTTTKKGEIFELK ELNSD IASMTVGKDVSALFPDVVNCMQT
Sbjct: 1 MTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLFDLCS 116
DNLELKKLVYLYLMNYAKS PDMAIMA +TF + + + +R+ I + +
Sbjct: 61 DNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITE 120
Query: 117 SVGVFVKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTA 171
+ ++ C +D +P +R A+ V + I + + + L+ + D +P V A
Sbjct: 121 YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANA 180
Query: 172 AVCVAKL 178
++++
Sbjct: 181 VAALSEI 187
Score = 336 (123.3 bits), Expect = 2.7e-180, Sum P(2) = 2.7e-180
Identities = 63/70 (90%), Positives = 70/70 (100%)
Query: 814 QVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDN 873
+VNYVVQEAIVVIKDIFRKYPNKYE++I+TLCENLD+LDEPEARA+MIWI+GEYAERIDN
Sbjct: 402 KVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDN 461
Query: 874 ADELLESFLE 883
ADELLESFLE
Sbjct: 462 ADELLESFLE 471
Score = 60 (26.2 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 55/253 (21%), Positives = 102/253 (40%)
Query: 558 SNPLIRALAVRTMGCIRVDKITEYLCEPLRKC-LKDEDP-YVRKTAAVCVAKLYDINAQL 615
+ P ++ +A+R + I V K E L ++ +K DP YV+ + +L A +
Sbjct: 294 AEPELQYVALRNINLI-VQKRPEVLKHEMKVFFVKYNDPIYVKLEKLDIMIRLAS-QANI 351
Query: 616 VEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLL-TALNE 674
+ L +LK+ ++ + V AV A+ + E T+ L+ T +N
Sbjct: 352 AQ---VLAELKEYATEVDVDFVRKAVRAIGR---CAIKVEQSAERCVSTLLDLIQTKVNY 405
Query: 675 CTEWGQVFILDSLSNYSPKDDREAQSICERITPR-LAHANAAVV------LSAVKVLMKL 727
+ V I D Y K + ++CE + A AA++ + +L
Sbjct: 406 VVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADEL 465
Query: 728 ME-MLPGEGDFVSTLTKKLAPPLVTLLSSEP-EVQYVALRNINLIVQK--RPDILKHEMK 783
+E L G D + + +L +V L +P E Q + + ++L Q PD+
Sbjct: 466 LESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGYI 525
Query: 784 VFFVKYNDPIYVK 796
+ + DP+ K
Sbjct: 526 YWRLLSTDPVAAK 538
Score = 42 (19.8 bits), Expect = 1.7e-36, Sum P(2) = 1.7e-36
Identities = 24/99 (24%), Positives = 40/99 (40%)
Query: 708 RLA-HANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVAL-- 764
RLA AN A VL+ +K +++ DFV + + + + S L
Sbjct: 344 RLASQANIAQVLAELKEYATEVDV-----DFVRKAVRAIGRCAIKVEQSAERCVSTLLDL 398
Query: 765 --RNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLD 801
+N +VQ+ ++K + + KY I E LD
Sbjct: 399 IQTKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLD 437
>MGI|MGI:1096368 [details] [associations]
symbol:Ap1b1 "adaptor protein complex AP-1, beta 1 subunit"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=TAS] [GO:0006810
"transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=TAS] [GO:0006897 "endocytosis" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0048268 "clathrin coat assembly"
evidence=ISO] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 MGI:MGI:1096368
GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 EMBL:CH466574
GO:GO:0006897 GO:GO:0005802 eggNOG:COG5096 HOGENOM:HOG000163270
HOVERGEN:HBG050515 GO:GO:0030131 GO:GO:0030665 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 CTD:162 KO:K12392 OMA:PGNPSCT
ChiTaRS:AP1B1 EMBL:Y07919 EMBL:AK159273 EMBL:BC008513
IPI:IPI00346965 RefSeq:NP_031480.2 UniGene:Mm.274816
ProteinModelPortal:O35643 SMR:O35643 IntAct:O35643 STRING:O35643
PhosphoSite:O35643 PaxDb:O35643 PRIDE:O35643
Ensembl:ENSMUST00000009234 GeneID:11764 KEGG:mmu:11764
GeneTree:ENSGT00530000063138 NextBio:279521 Bgee:O35643
CleanEx:MM_AP1B1 Genevestigator:O35643 Uniprot:O35643
Length = 943
Score = 1436 (510.6 bits), Expect = 2.7e-180, Sum P(2) = 2.7e-180
Identities = 288/337 (85%), Positives = 309/337 (91%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVNTFVKDCE
Sbjct: 37 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCE 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINAQLV
Sbjct: 97 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLV 156
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
EDQGFLD LKDL+SDSNPMVVANAVAALSE+ E+ S L+++N Q+INKLLTALNECT
Sbjct: 157 EDQGFLDTLKDLISDSNPMVVANAVAALSEIAESHPSS-NLLDLNPQSINKLLTALNECT 215
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQ+FILD L+NY PKDDREAQSICER+TPRL+HAN+AVVLSAVKVLMK MEML + D
Sbjct: 216 EWGQIFILDCLANYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLD 275
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ +TL KKLAPPLVTLLS+EPE+QYVALRNINLIVQKRP+ILKHEMKVFFVKYNDPIYVK
Sbjct: 276 YYATLLKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVK 335
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
LEKLDIMIRLASQANIAQV ++E A V D RK
Sbjct: 336 LEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRK 372
Score = 603 (217.3 bits), Expect = 2.2e-98, Sum P(2) = 2.2e-98
Identities = 143/258 (55%), Positives = 173/258 (67%)
Query: 278 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYV 337
D+ +TL KKLAPPLVTLLS+EPE+QYVALRNINLIVQKRP+ILKHEMKVFFVKYNDPIYV
Sbjct: 275 DYYATLLKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYV 334
Query: 338 KLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 397
KLEKLDIMIRLASQANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST
Sbjct: 335 KLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 394
Query: 398 LLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQV 457
LLDLIQTK + A +++ + ++ V L + L P ++ V
Sbjct: 395 LLDLIQTKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSL--DEPEARAAMIWIV 452
Query: 458 LSLATQDSDNPDLRDRGFIY-WRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVN 516
A + DN D F+ + ST +L + +L + T + L V++
Sbjct: 453 GEYAER-IDNADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPT---ETQELVQQVLS 508
Query: 517 C--MQTDNLELKKLVYLY 532
+DN +L+ Y+Y
Sbjct: 509 LATQDSDNPDLRDRGYIY 526
Score = 432 (157.1 bits), Expect = 2.2e-98, Sum P(2) = 2.2e-98
Identities = 82/89 (92%), Positives = 85/89 (95%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 87 AVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 146
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KL+DINAQLVEDQGFLD LKDL+SDSNPM
Sbjct: 147 KLHDINAQLVEDQGFLDTLKDLISDSNPM 175
Score = 381 (139.2 bits), Expect = 3.7e-72, Sum P(2) = 3.7e-72
Identities = 74/79 (93%), Positives = 79/79 (100%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESFLEGFHDE+TQVQLQLLTAIVKLFLK+PT+TQELVQQVLSLATQD
Sbjct: 454 EYAERIDNADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQD 513
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRG+IYWRLLST
Sbjct: 514 SDNPDLRDRGYIYWRLLST 532
Score = 376 (137.4 bits), Expect = 4.0e-61, Sum P(2) = 4.0e-61
Identities = 89/187 (47%), Positives = 115/187 (61%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTTTKKGEIFELK ELNSD IASMTVGKDVSALFPDVVNCMQT
Sbjct: 1 MTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLFDLCS 116
DNLELKKLVYLYLMNYAKS PDMAIMA +TF + + + +R+ I + +
Sbjct: 61 DNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITE 120
Query: 117 SVGVFVKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTA 171
+ ++ C +D +P +R A+ V + I + + + L+ + D +P V A
Sbjct: 121 YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANA 180
Query: 172 AVCVAKL 178
++++
Sbjct: 181 VAALSEI 187
Score = 336 (123.3 bits), Expect = 2.7e-180, Sum P(2) = 2.7e-180
Identities = 63/70 (90%), Positives = 70/70 (100%)
Query: 814 QVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDN 873
+VNYVVQEAIVVIKDIFRKYPNKYE++I+TLCENLD+LDEPEARA+MIWI+GEYAERIDN
Sbjct: 402 KVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDN 461
Query: 874 ADELLESFLE 883
ADELLESFLE
Sbjct: 462 ADELLESFLE 471
Score = 65 (27.9 bits), Expect = 6.6e-39, Sum P(2) = 6.6e-39
Identities = 62/297 (20%), Positives = 120/297 (40%)
Query: 558 SNPLIRALAVRTMGCIRVDKITEYLCEPLRKC-LKDEDP-YVRKTAAVCVAKLYDINAQL 615
+ P ++ +A+R + I V K E L ++ +K DP YV+ + +L A +
Sbjct: 294 AEPELQYVALRNINLI-VQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLAS-QANI 351
Query: 616 VEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLL-TALNE 674
+ L +LK+ ++ + V AV A+ + E T+ L+ T +N
Sbjct: 352 AQ---VLAELKEYATEVDVDFVRKAVRAIGR---CAIKVEQSAERCVSTLLDLIQTKVNY 405
Query: 675 CTEWGQVFILDSLSNYSPKDDREAQSICERITPR-LAHANAAVV------LSAVKVLMKL 727
+ V I D Y K + ++CE + A AA++ + +L
Sbjct: 406 VVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADEL 465
Query: 728 ME-MLPGEGDFVSTLTKKLAPPLVTLLSSEP-EVQYVALRNINLIVQK--RPDILKHEMK 783
+E L G D + + +L +V L +P E Q + + ++L Q PD+
Sbjct: 466 LESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGYI 525
Query: 784 VFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVI---KDIFRKYPNKY 837
+ + DP+ K L ++ + ++ + ++ E I I ++ K PN +
Sbjct: 526 YWRLLSTDPVAAKEVVLAEKPLISEETDLIEPT-LLDELICYIGTLASVYHKPPNAF 581
>UNIPROTKB|C9J1E7 [details] [associations]
symbol:AP1B1 "AP-1 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 PIRSF:PIRSF002291 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 HOGENOM:HOG000163270 PANTHER:PTHR11134
EMBL:AC000041 EMBL:AC002059 HGNC:HGNC:554 ChiTaRS:AP1B1
IPI:IPI00946351 ProteinModelPortal:C9J1E7 SMR:C9J1E7 STRING:C9J1E7
PRIDE:C9J1E7 Ensembl:ENST00000421126 ArrayExpress:C9J1E7
Bgee:C9J1E7 Uniprot:C9J1E7
Length = 578
Score = 1435 (510.2 bits), Expect = 3.4e-180, Sum P(2) = 3.4e-180
Identities = 288/337 (85%), Positives = 308/337 (91%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVNTFVKDCE
Sbjct: 37 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCE 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINAQLV
Sbjct: 97 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLV 156
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
EDQGFLD LKDL+SDSNPMVVANAVAALSE+ E+ S L+++N Q+INKLLTALNECT
Sbjct: 157 EDQGFLDTLKDLISDSNPMVVANAVAALSEIAESHPSS-NLLDLNPQSINKLLTALNECT 215
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQ+FILD L+NY PKDDREAQSICER+TPRL+HAN+AVVLSAVKVLMK MEML + D
Sbjct: 216 EWGQIFILDCLANYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLD 275
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ TL KKLAPPLVTLLS+EPE+QYVALRNINLIVQKRP+ILKHEMKVFFVKYNDPIYVK
Sbjct: 276 YYGTLLKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVK 335
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
LEKLDIMIRLASQANIAQV ++E A V D RK
Sbjct: 336 LEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRK 372
Score = 602 (217.0 bits), Expect = 2.5e-102, Sum P(2) = 2.5e-102
Identities = 143/258 (55%), Positives = 172/258 (66%)
Query: 278 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYV 337
D+ TL KKLAPPLVTLLS+EPE+QYVALRNINLIVQKRP+ILKHEMKVFFVKYNDPIYV
Sbjct: 275 DYYGTLLKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYV 334
Query: 338 KLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 397
KLEKLDIMIRLASQANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST
Sbjct: 335 KLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 394
Query: 398 LLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQV 457
LLDLIQTK + A +++ + ++ V L + L P ++ V
Sbjct: 395 LLDLIQTKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSL--DEPEARAAMIWIV 452
Query: 458 LSLATQDSDNPDLRDRGFIY-WRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVN 516
A + DN D F+ + ST +L + +L + T + L V++
Sbjct: 453 GEYAER-IDNADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPT---ETQELVQQVLS 508
Query: 517 C--MQTDNLELKKLVYLY 532
+DN +L+ Y+Y
Sbjct: 509 LATQDSDNPDLRDRGYIY 526
Score = 432 (157.1 bits), Expect = 2.5e-102, Sum P(2) = 2.5e-102
Identities = 82/89 (92%), Positives = 85/89 (95%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 87 AVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 146
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KL+DINAQLVEDQGFLD LKDL+SDSNPM
Sbjct: 147 KLHDINAQLVEDQGFLDTLKDLISDSNPM 175
Score = 381 (139.2 bits), Expect = 3.1e-77, Sum P(2) = 3.1e-77
Identities = 74/79 (93%), Positives = 79/79 (100%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESFLEGFHDE+TQVQLQLLTAIVKLFLK+PT+TQELVQQVLSLATQD
Sbjct: 454 EYAERIDNADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQD 513
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRG+IYWRLLST
Sbjct: 514 SDNPDLRDRGYIYWRLLST 532
Score = 376 (137.4 bits), Expect = 1.0e-62, Sum P(2) = 1.0e-62
Identities = 89/187 (47%), Positives = 115/187 (61%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTTTKKGEIFELK ELNSD IASMTVGKDVSALFPDVVNCMQT
Sbjct: 1 MTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLFDLCS 116
DNLELKKLVYLYLMNYAKS PDMAIMA +TF + + + +R+ I + +
Sbjct: 61 DNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITE 120
Query: 117 SVGVFVKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTA 171
+ ++ C +D +P +R A+ V + I + + + L+ + D +P V A
Sbjct: 121 YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANA 180
Query: 172 AVCVAKL 178
++++
Sbjct: 181 VAALSEI 187
Score = 336 (123.3 bits), Expect = 3.4e-180, Sum P(2) = 3.4e-180
Identities = 63/70 (90%), Positives = 70/70 (100%)
Query: 814 QVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDN 873
+VNYVVQEAIVVIKDIFRKYPNKYE++I+TLCENLD+LDEPEARA+MIWI+GEYAERIDN
Sbjct: 402 KVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDN 461
Query: 874 ADELLESFLE 883
ADELLESFLE
Sbjct: 462 ADELLESFLE 471
Score = 60 (26.2 bits), Expect = 1.9e-43, Sum P(2) = 1.9e-43
Identities = 55/253 (21%), Positives = 102/253 (40%)
Query: 558 SNPLIRALAVRTMGCIRVDKITEYLCEPLRKC-LKDEDP-YVRKTAAVCVAKLYDINAQL 615
+ P ++ +A+R + I V K E L ++ +K DP YV+ + +L A +
Sbjct: 294 AEPELQYVALRNINLI-VQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLAS-QANI 351
Query: 616 VEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLL-TALNE 674
+ L +LK+ ++ + V AV A+ + E T+ L+ T +N
Sbjct: 352 AQ---VLAELKEYATEVDVDFVRKAVRAIGR---CAIKVEQSAERCVSTLLDLIQTKVNY 405
Query: 675 CTEWGQVFILDSLSNYSPKDDREAQSICERITPR-LAHANAAVV------LSAVKVLMKL 727
+ V I D Y K + ++CE + A AA++ + +L
Sbjct: 406 VVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADEL 465
Query: 728 ME-MLPGEGDFVSTLTKKLAPPLVTLLSSEP-EVQYVALRNINLIVQK--RPDILKHEMK 783
+E L G D + + +L +V L +P E Q + + ++L Q PD+
Sbjct: 466 LESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGYI 525
Query: 784 VFFVKYNDPIYVK 796
+ + DP+ K
Sbjct: 526 YWRLLSTDPVAAK 538
Score = 42 (19.8 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 24/99 (24%), Positives = 40/99 (40%)
Query: 708 RLA-HANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVAL-- 764
RLA AN A VL+ +K +++ DFV + + + + S L
Sbjct: 344 RLASQANIAQVLAELKEYATEVDV-----DFVRKAVRAIGRCAIKVEQSAERCVSTLLDL 398
Query: 765 --RNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLD 801
+N +VQ+ ++K + + KY I E LD
Sbjct: 399 IQTKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLD 437
>UNIPROTKB|Q10567 [details] [associations]
symbol:AP1B1 "AP-1 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0030665
"clathrin-coated vesicle membrane" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005215 "transporter activity"
evidence=TAS] [GO:0000139 "Golgi membrane" evidence=TAS]
[GO:0005765 "lysosomal membrane" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006892 "post-Golgi vesicle-mediated
transport" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016044 "cellular membrane organization"
evidence=TAS] [GO:0019886 "antigen processing and presentation of
exogenous peptide antigen via MHC class II" evidence=TAS]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=TAS]
[GO:0032588 "trans-Golgi network membrane" evidence=TAS]
[GO:0050690 "regulation of defense response to virus by virus"
evidence=TAS] Reactome:REACT_11123 InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0005829 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006886 GO:GO:0000139 GO:GO:0050690 GO:GO:0016032
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0005765 GO:GO:0032588 GO:GO:0019886 GO:GO:0008565
Pathway_Interaction_DB:hnf3apathway GO:GO:0006897 GO:GO:0005215
GO:GO:0030659 eggNOG:COG5096 HOGENOM:HOG000163270
HOVERGEN:HBG050515 OrthoDB:EOG4PG607 GO:GO:0030131 GO:GO:0030665
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 EMBL:L13939
EMBL:CT841508 EMBL:AC000041 EMBL:AC002059 EMBL:BC046242 EMBL:U36268
EMBL:U36250 EMBL:U36251 EMBL:U36252 EMBL:U36253 EMBL:U36254
EMBL:U36255 EMBL:U36256 EMBL:U36257 EMBL:U36258 EMBL:U36259
EMBL:U36260 EMBL:U36261 EMBL:U36262 EMBL:U36263 EMBL:U36264
EMBL:U36265 EMBL:U36266 EMBL:U36267 EMBL:AF379038 EMBL:AF379039
EMBL:L48038 IPI:IPI00328257 IPI:IPI00384489 IPI:IPI00413947
IPI:IPI00940292 PIR:I54360 RefSeq:NP_001118.3 RefSeq:NP_001159491.1
RefSeq:NP_663782.2 UniGene:Hs.368794 ProteinModelPortal:Q10567
SMR:Q10567 DIP:DIP-24207N IntAct:Q10567 STRING:Q10567
PhosphoSite:Q10567 DMDM:290457628 PaxDb:Q10567 PRIDE:Q10567
DNASU:162 Ensembl:ENST00000317368 Ensembl:ENST00000356015
Ensembl:ENST00000357586 Ensembl:ENST00000402502
Ensembl:ENST00000405198 Ensembl:ENST00000415447
Ensembl:ENST00000432560 GeneID:162 KEGG:hsa:162 UCSC:uc003afi.3
UCSC:uc003afj.3 CTD:162 GeneCards:GC22M029723 HGNC:HGNC:554
MIM:600157 neXtProt:NX_Q10567 PharmGKB:PA24844 InParanoid:Q10567
KO:K12392 OMA:PGNPSCT PhylomeDB:Q10567 ChiTaRS:AP1B1 GenomeRNAi:162
NextBio:647 ArrayExpress:Q10567 Bgee:Q10567 CleanEx:HS_AP1B1
Genevestigator:Q10567 GermOnline:ENSG00000100280 GO:GO:0016044
GO:GO:0006892 Uniprot:Q10567
Length = 949
Score = 1435 (510.2 bits), Expect = 3.4e-180, Sum P(2) = 3.4e-180
Identities = 288/337 (85%), Positives = 308/337 (91%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVNTFVKDCE
Sbjct: 37 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCE 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINAQLV
Sbjct: 97 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLV 156
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
EDQGFLD LKDL+SDSNPMVVANAVAALSE+ E+ S L+++N Q+INKLLTALNECT
Sbjct: 157 EDQGFLDTLKDLISDSNPMVVANAVAALSEIAESHPSS-NLLDLNPQSINKLLTALNECT 215
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQ+FILD L+NY PKDDREAQSICER+TPRL+HAN+AVVLSAVKVLMK MEML + D
Sbjct: 216 EWGQIFILDCLANYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLD 275
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ TL KKLAPPLVTLLS+EPE+QYVALRNINLIVQKRP+ILKHEMKVFFVKYNDPIYVK
Sbjct: 276 YYGTLLKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVK 335
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
LEKLDIMIRLASQANIAQV ++E A V D RK
Sbjct: 336 LEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRK 372
Score = 602 (217.0 bits), Expect = 3.4e-98, Sum P(2) = 3.4e-98
Identities = 143/258 (55%), Positives = 172/258 (66%)
Query: 278 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYV 337
D+ TL KKLAPPLVTLLS+EPE+QYVALRNINLIVQKRP+ILKHEMKVFFVKYNDPIYV
Sbjct: 275 DYYGTLLKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYV 334
Query: 338 KLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 397
KLEKLDIMIRLASQANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST
Sbjct: 335 KLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 394
Query: 398 LLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQV 457
LLDLIQTK + A +++ + ++ V L + L P ++ V
Sbjct: 395 LLDLIQTKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSL--DEPEARAAMIWIV 452
Query: 458 LSLATQDSDNPDLRDRGFIY-WRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVN 516
A + DN D F+ + ST +L + +L + T + L V++
Sbjct: 453 GEYAER-IDNADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPT---ETQELVQQVLS 508
Query: 517 C--MQTDNLELKKLVYLY 532
+DN +L+ Y+Y
Sbjct: 509 LATQDSDNPDLRDRGYIY 526
Score = 432 (157.1 bits), Expect = 3.4e-98, Sum P(2) = 3.4e-98
Identities = 82/89 (92%), Positives = 85/89 (95%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 87 AVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 146
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KL+DINAQLVEDQGFLD LKDL+SDSNPM
Sbjct: 147 KLHDINAQLVEDQGFLDTLKDLISDSNPM 175
Score = 381 (139.2 bits), Expect = 3.8e-72, Sum P(2) = 3.8e-72
Identities = 74/79 (93%), Positives = 79/79 (100%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESFLEGFHDE+TQVQLQLLTAIVKLFLK+PT+TQELVQQVLSLATQD
Sbjct: 454 EYAERIDNADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQD 513
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRG+IYWRLLST
Sbjct: 514 SDNPDLRDRGYIYWRLLST 532
Score = 376 (137.4 bits), Expect = 4.1e-61, Sum P(2) = 4.1e-61
Identities = 89/187 (47%), Positives = 115/187 (61%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTTTKKGEIFELK ELNSD IASMTVGKDVSALFPDVVNCMQT
Sbjct: 1 MTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLFDLCS 116
DNLELKKLVYLYLMNYAKS PDMAIMA +TF + + + +R+ I + +
Sbjct: 61 DNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITE 120
Query: 117 SVGVFVKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTA 171
+ ++ C +D +P +R A+ V + I + + + L+ + D +P V A
Sbjct: 121 YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANA 180
Query: 172 AVCVAKL 178
++++
Sbjct: 181 VAALSEI 187
Score = 336 (123.3 bits), Expect = 3.4e-180, Sum P(2) = 3.4e-180
Identities = 63/70 (90%), Positives = 70/70 (100%)
Query: 814 QVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDN 873
+VNYVVQEAIVVIKDIFRKYPNKYE++I+TLCENLD+LDEPEARA+MIWI+GEYAERIDN
Sbjct: 402 KVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDN 461
Query: 874 ADELLESFLE 883
ADELLESFLE
Sbjct: 462 ADELLESFLE 471
Score = 60 (26.2 bits), Expect = 2.3e-38, Sum P(2) = 2.3e-38
Identities = 55/253 (21%), Positives = 102/253 (40%)
Query: 558 SNPLIRALAVRTMGCIRVDKITEYLCEPLRKC-LKDEDP-YVRKTAAVCVAKLYDINAQL 615
+ P ++ +A+R + I V K E L ++ +K DP YV+ + +L A +
Sbjct: 294 AEPELQYVALRNINLI-VQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLAS-QANI 351
Query: 616 VEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLL-TALNE 674
+ L +LK+ ++ + V AV A+ + E T+ L+ T +N
Sbjct: 352 AQ---VLAELKEYATEVDVDFVRKAVRAIGR---CAIKVEQSAERCVSTLLDLIQTKVNY 405
Query: 675 CTEWGQVFILDSLSNYSPKDDREAQSICERITPR-LAHANAAVV------LSAVKVLMKL 727
+ V I D Y K + ++CE + A AA++ + +L
Sbjct: 406 VVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADEL 465
Query: 728 ME-MLPGEGDFVSTLTKKLAPPLVTLLSSEP-EVQYVALRNINLIVQK--RPDILKHEMK 783
+E L G D + + +L +V L +P E Q + + ++L Q PD+
Sbjct: 466 LESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGYI 525
Query: 784 VFFVKYNDPIYVK 796
+ + DP+ K
Sbjct: 526 YWRLLSTDPVAAK 538
Score = 42 (19.8 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 24/99 (24%), Positives = 40/99 (40%)
Query: 708 RLA-HANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVAL-- 764
RLA AN A VL+ +K +++ DFV + + + + S L
Sbjct: 344 RLASQANIAQVLAELKEYATEVDV-----DFVRKAVRAIGRCAIKVEQSAERCVSTLLDL 398
Query: 765 --RNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLD 801
+N +VQ+ ++K + + KY I E LD
Sbjct: 399 IQTKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLD 437
>UNIPROTKB|F1NCI1 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 OMA:PGNPSCT
GeneTree:ENSGT00530000063138 EMBL:AADN02050473 EMBL:AADN02050474
EMBL:AADN02050475 IPI:IPI00820134 Ensembl:ENSGALT00000013205
Uniprot:F1NCI1
Length = 922
Score = 1435 (510.2 bits), Expect = 3.4e-180, Sum P(2) = 3.4e-180
Identities = 288/337 (85%), Positives = 308/337 (91%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVNTFVKDCE
Sbjct: 25 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCE 84
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINAQLV
Sbjct: 85 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLV 144
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
EDQGFLD LKDL+SDSNPMVVANAVAALSE+ E+ S L+++N Q+INKLLTALNECT
Sbjct: 145 EDQGFLDTLKDLISDSNPMVVANAVAALSEIAESHPSS-NLLDLNPQSINKLLTALNECT 203
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQ+FILD L+NY PKDDREAQSICER+TPRL+HAN+AVVLSAVKVLMK MEML + D
Sbjct: 204 EWGQIFILDCLANYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLD 263
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ TL KKLAPPLVTLLS+EPE+QYVALRNINLIVQKRP+ILKHEMKVFFVKYNDPIYVK
Sbjct: 264 YYGTLLKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVK 323
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
LEKLDIMIRLASQANIAQV ++E A V D RK
Sbjct: 324 LEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRK 360
Score = 602 (217.0 bits), Expect = 2.2e-98, Sum P(2) = 2.2e-98
Identities = 143/258 (55%), Positives = 172/258 (66%)
Query: 278 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYV 337
D+ TL KKLAPPLVTLLS+EPE+QYVALRNINLIVQKRP+ILKHEMKVFFVKYNDPIYV
Sbjct: 263 DYYGTLLKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYV 322
Query: 338 KLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 397
KLEKLDIMIRLASQANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST
Sbjct: 323 KLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 382
Query: 398 LLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQV 457
LLDLIQTK + A +++ + ++ V L + L P ++ V
Sbjct: 383 LLDLIQTKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSL--DEPEARAAMIWIV 440
Query: 458 LSLATQDSDNPDLRDRGFIY-WRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVN 516
A + DN D F+ + ST +L + +L + T + L V++
Sbjct: 441 GEYAER-IDNADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPT---ETQELVQQVLS 496
Query: 517 C--MQTDNLELKKLVYLY 532
+DN +L+ Y+Y
Sbjct: 497 LATQDSDNPDLRDRGYIY 514
Score = 432 (157.1 bits), Expect = 2.2e-98, Sum P(2) = 2.2e-98
Identities = 82/89 (92%), Positives = 85/89 (95%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 75 AVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 134
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KL+DINAQLVEDQGFLD LKDL+SDSNPM
Sbjct: 135 KLHDINAQLVEDQGFLDTLKDLISDSNPM 163
Score = 381 (139.2 bits), Expect = 3.3e-72, Sum P(2) = 3.3e-72
Identities = 74/79 (93%), Positives = 79/79 (100%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESFLEGFHDE+TQVQLQLLTAIVKLFLK+PT+TQELVQQVLSLATQD
Sbjct: 442 EYAERIDNADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQD 501
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRG+IYWRLLST
Sbjct: 502 SDNPDLRDRGYIYWRLLST 520
Score = 336 (123.3 bits), Expect = 3.4e-180, Sum P(2) = 3.4e-180
Identities = 63/70 (90%), Positives = 70/70 (100%)
Query: 814 QVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDN 873
+VNYVVQEAIVVIKDIFRKYPNKYE++I+TLCENLD+LDEPEARA+MIWI+GEYAERIDN
Sbjct: 390 KVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDN 449
Query: 874 ADELLESFLE 883
ADELLESFLE
Sbjct: 450 ADELLESFLE 459
Score = 313 (115.2 bits), Expect = 2.6e-54, Sum P(2) = 2.6e-54
Identities = 77/175 (44%), Positives = 103/175 (58%)
Query: 13 GEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLY 72
GEIFELK ELNSD IASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLY
Sbjct: 1 GEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLY 60
Query: 73 LMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLFDLCSSVGVFVKDC-ED 127
LMNYAKS PDMAIMA +TF + + + +R+ I + + + ++ C +D
Sbjct: 61 LMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKD 120
Query: 128 SNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTAAVCVAKL 178
+P +R A+ V + I + + + L+ + D +P V A ++++
Sbjct: 121 EDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANAVAALSEI 175
Score = 63 (27.2 bits), Expect = 9.5e-39, Sum P(2) = 9.5e-39
Identities = 65/305 (21%), Positives = 124/305 (40%)
Query: 558 SNPLIRALAVRTMGCIRVDKITEYLCEPLRKC-LKDEDP-YVRKTAAVCVAKLYDINAQL 615
+ P ++ +A+R + I V K E L ++ +K DP YV+ + +L A +
Sbjct: 282 AEPELQYVALRNINLI-VQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLAS-QANI 339
Query: 616 VEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLL-TALNE 674
+ L +LK+ ++ + V AV A+ + E T+ L+ T +N
Sbjct: 340 AQ---VLAELKEYATEVDVDFVRKAVRAIGR---CAIKVEQSAERCVSTLLDLIQTKVNY 393
Query: 675 CTEWGQVFILDSLSNYSPKDDREAQSICERITPR-LAHANAAVV------LSAVKVLMKL 727
+ V I D Y K + ++CE + A AA++ + +L
Sbjct: 394 VVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADEL 453
Query: 728 ME-MLPGEGDFVSTLTKKLAPPLVTLLSSEP-EVQYVALRNINLIVQK--RPDILKHEMK 783
+E L G D + + +L +V L +P E Q + + ++L Q PD+
Sbjct: 454 LESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGYI 513
Query: 784 VFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVI---KDIFRKYPNKY-ET 839
+ + DP+ K L ++ + ++ + ++ E I I ++ K P+ + E
Sbjct: 514 YWRLLSTDPVAAKEVVLAEKPLISEETDLIEPT-LLDELICYIGTLASVYHKPPSAFVEG 572
Query: 840 IISTL 844
IS L
Sbjct: 573 SISCL 577
Score = 54 (24.1 bits), Expect = 8.3e-38, Sum P(2) = 8.3e-38
Identities = 30/145 (20%), Positives = 63/145 (43%)
Query: 726 KLME-MLPGEGDFVSTLTKKLAPPLVTLLSSEP-EVQYVALRNINLIVQK--RPDILKHE 781
+L+E L G D + + +L +V L +P E Q + + ++L Q PD+
Sbjct: 452 ELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRG 511
Query: 782 MKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVI---KDIFRKYPNKYE 838
+ + DP+ K L ++ + ++ + ++ E I I ++ K P+ +
Sbjct: 512 YIYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPT-LLDELICYIGTLASVYHKPPSAFV 570
Query: 839 ----TIISTLCENLDTLDEPEARAS 859
+ +S LC ++ + P+A S
Sbjct: 571 EGSISCLSLLCPRSESAESPDAAPS 595
>UNIPROTKB|F1NCR9 [details] [associations]
symbol:AP1B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
EMBL:AADN02050473 EMBL:AADN02050474 EMBL:AADN02050475
IPI:IPI00571321 Ensembl:ENSGALT00000038029 Uniprot:F1NCR9
Length = 881
Score = 1435 (510.2 bits), Expect = 3.4e-180, Sum P(2) = 3.4e-180
Identities = 288/337 (85%), Positives = 308/337 (91%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVNTFVKDCE
Sbjct: 25 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCE 84
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINAQLV
Sbjct: 85 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLV 144
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
EDQGFLD LKDL+SDSNPMVVANAVAALSE+ E+ S L+++N Q+INKLLTALNECT
Sbjct: 145 EDQGFLDTLKDLISDSNPMVVANAVAALSEIAESHPSS-NLLDLNPQSINKLLTALNECT 203
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQ+FILD L+NY PKDDREAQSICER+TPRL+HAN+AVVLSAVKVLMK MEML + D
Sbjct: 204 EWGQIFILDCLANYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLD 263
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ TL KKLAPPLVTLLS+EPE+QYVALRNINLIVQKRP+ILKHEMKVFFVKYNDPIYVK
Sbjct: 264 YYGTLLKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVK 323
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
LEKLDIMIRLASQANIAQV ++E A V D RK
Sbjct: 324 LEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRK 360
Score = 602 (217.0 bits), Expect = 8.0e-99, Sum P(2) = 8.0e-99
Identities = 143/258 (55%), Positives = 172/258 (66%)
Query: 278 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYV 337
D+ TL KKLAPPLVTLLS+EPE+QYVALRNINLIVQKRP+ILKHEMKVFFVKYNDPIYV
Sbjct: 263 DYYGTLLKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYV 322
Query: 338 KLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 397
KLEKLDIMIRLASQANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST
Sbjct: 323 KLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 382
Query: 398 LLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQV 457
LLDLIQTK + A +++ + ++ V L + L P ++ V
Sbjct: 383 LLDLIQTKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSL--DEPEARAAMIWIV 440
Query: 458 LSLATQDSDNPDLRDRGFIY-WRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVN 516
A + DN D F+ + ST +L + +L + T + L V++
Sbjct: 441 GEYAER-IDNADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPT---ETQELVQQVLS 496
Query: 517 C--MQTDNLELKKLVYLY 532
+DN +L+ Y+Y
Sbjct: 497 LATQDSDNPDLRDRGYIY 514
Score = 432 (157.1 bits), Expect = 8.0e-99, Sum P(2) = 8.0e-99
Identities = 82/89 (92%), Positives = 85/89 (95%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 75 AVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 134
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KL+DINAQLVEDQGFLD LKDL+SDSNPM
Sbjct: 135 KLHDINAQLVEDQGFLDTLKDLISDSNPM 163
Score = 381 (139.2 bits), Expect = 2.5e-72, Sum P(2) = 2.5e-72
Identities = 74/79 (93%), Positives = 79/79 (100%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESFLEGFHDE+TQVQLQLLTAIVKLFLK+PT+TQELVQQVLSLATQD
Sbjct: 442 EYAERIDNADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQD 501
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRG+IYWRLLST
Sbjct: 502 SDNPDLRDRGYIYWRLLST 520
Score = 336 (123.3 bits), Expect = 3.4e-180, Sum P(2) = 3.4e-180
Identities = 63/70 (90%), Positives = 70/70 (100%)
Query: 814 QVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDN 873
+VNYVVQEAIVVIKDIFRKYPNKYE++I+TLCENLD+LDEPEARA+MIWI+GEYAERIDN
Sbjct: 390 KVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDN 449
Query: 874 ADELLESFLE 883
ADELLESFLE
Sbjct: 450 ADELLESFLE 459
Score = 313 (115.2 bits), Expect = 2.2e-54, Sum P(2) = 2.2e-54
Identities = 77/175 (44%), Positives = 103/175 (58%)
Query: 13 GEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLY 72
GEIFELK ELNSD IASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLY
Sbjct: 1 GEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLY 60
Query: 73 LMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLFDLCSSVGVFVKDC-ED 127
LMNYAKS PDMAIMA +TF + + + +R+ I + + + ++ C +D
Sbjct: 61 LMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKD 120
Query: 128 SNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTAAVCVAKL 178
+P +R A+ V + I + + + L+ + D +P V A ++++
Sbjct: 121 EDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANAVAALSEI 175
Score = 63 (27.2 bits), Expect = 7.3e-39, Sum P(2) = 7.3e-39
Identities = 65/309 (21%), Positives = 125/309 (40%)
Query: 558 SNPLIRALAVRTMGCIRVDKITEYLCEPLRKC-LKDEDP-YVRKTAAVCVAKLYDINAQL 615
+ P ++ +A+R + I V K E L ++ +K DP YV+ + +L A +
Sbjct: 282 AEPELQYVALRNINLI-VQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLAS-QANI 339
Query: 616 VEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLL-TALNE 674
+ L +LK+ ++ + V AV A+ + E T+ L+ T +N
Sbjct: 340 AQ---VLAELKEYATEVDVDFVRKAVRAIGR---CAIKVEQSAERCVSTLLDLIQTKVNY 393
Query: 675 CTEWGQVFILDSLSNYSPKDDREAQSICERITPR-LAHANAAVV------LSAVKVLMKL 727
+ V I D Y K + ++CE + A AA++ + +L
Sbjct: 394 VVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADEL 453
Query: 728 ME-MLPGEGDFVSTLTKKLAPPLVTLLSSEP-EVQYVALRNINLIVQK--RPDILKHEMK 783
+E L G D + + +L +V L +P E Q + + ++L Q PD+
Sbjct: 454 LESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGYI 513
Query: 784 VFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVI---KDIFRKYPNKY-ET 839
+ + DP+ K L ++ + ++ + ++ E I I ++ K P+ + E
Sbjct: 514 YWRLLSTDPVAAKEVVLAEKPLISEETDLIEPT-LLDELICYIGTLASVYHKPPSAFVEE 572
Query: 840 IISTLCENL 848
S C +L
Sbjct: 573 SSSISCLSL 581
Score = 50 (22.7 bits), Expect = 1.7e-37, Sum P(2) = 1.7e-37
Identities = 30/147 (20%), Positives = 63/147 (42%)
Query: 726 KLME-MLPGEGDFVSTLTKKLAPPLVTLLSSEP-EVQYVALRNINLIVQK--RPDILKHE 781
+L+E L G D + + +L +V L +P E Q + + ++L Q PD+
Sbjct: 452 ELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRG 511
Query: 782 MKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVI---KDIFRKYPNKYE 838
+ + DP+ K L ++ + ++ + ++ E I I ++ K P+ +
Sbjct: 512 YIYWRLLSTDPVAAKEVVLAEKPLISEETDLIEPT-LLDELICYIGTLASVYHKPPSAFV 570
Query: 839 ------TIISTLCENLDTLDEPEARAS 859
+ +S LC ++ + P+A S
Sbjct: 571 EESSSISCLSLLCPRSESAESPDAAPS 597
>RGD|2064 [details] [associations]
symbol:Ap1b1 "adaptor-related protein complex 1, beta 1 subunit"
species:10116 "Rattus norvegicus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030118 "clathrin
coat" evidence=IC] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0030276 "clathrin binding" evidence=IC] [GO:0030665
"clathrin-coated vesicle membrane" evidence=IEA] [GO:0048268
"clathrin coat assembly" evidence=IDA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
RGD:2064 GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 GO:GO:0006897
GO:GO:0030276 GO:GO:0030118 GO:GO:0048268 eggNOG:COG5096
HOGENOM:HOG000163270 HOVERGEN:HBG050515 GO:GO:0030131 GO:GO:0030665
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 CTD:162 KO:K12392
EMBL:M77245 IPI:IPI00201713 IPI:IPI00781585 PIR:B32105
RefSeq:NP_058973.1 UniGene:Rn.37383 PDB:1W63 PDBsum:1W63
ProteinModelPortal:P52303 SMR:P52303 IntAct:P52303 MINT:MINT-1344522
STRING:P52303 PhosphoSite:P52303 PRIDE:P52303 GeneID:29663
KEGG:rno:29663 UCSC:RGD:2064 EvolutionaryTrace:P52303 NextBio:609967
ArrayExpress:P52303 Genevestigator:P52303
GermOnline:ENSRNOG00000008786 Uniprot:P52303
Length = 949
Score = 1415 (503.2 bits), Expect = 9.2e-178, Sum P(2) = 9.2e-178
Identities = 285/337 (84%), Positives = 304/337 (90%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVNTFVKDCE
Sbjct: 37 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCE 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINAQLV
Sbjct: 97 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLV 156
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
EDQGFLD LKDL+SDSNPMVVAN VAALSE+ E+ S L+++ AQ+INKLLTALNECT
Sbjct: 157 EDQGFLDTLKDLISDSNPMVVANRVAALSEIAESHPSS-NLLDLKAQSINKLLTALNECT 215
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EW Q+FILD L NY PKDDREAQSICER+TPRL+HAN+AVVLSAVKVLMK MEML + D
Sbjct: 216 EWAQIFILDCLGNYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLD 275
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ +TL KKLAPPLVTLLS+EPE QYV LRNINLIVQKRP+ILKHEMKVFFVKYNDPIYVK
Sbjct: 276 YYATLLKKLAPPLVTLLSAEPEPQYVPLRNINLIVQKRPEILKHEMKVFFVKYNDPIYVK 335
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
LEKLDIMIRLASQANIAQV ++E A V D RK
Sbjct: 336 LEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRK 372
Score = 594 (214.2 bits), Expect = 5.2e-97, Sum P(2) = 5.2e-97
Identities = 142/258 (55%), Positives = 171/258 (66%)
Query: 278 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYV 337
D+ +TL KKLAPPLVTLLS+EPE QYV LRNINLIVQKRP+ILKHEMKVFFVKYNDPIYV
Sbjct: 275 DYYATLLKKLAPPLVTLLSAEPEPQYVPLRNINLIVQKRPEILKHEMKVFFVKYNDPIYV 334
Query: 338 KLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 397
KLEKLDIMIRLASQANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST
Sbjct: 335 KLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 394
Query: 398 LLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQV 457
LLDLIQTK + A +++ + ++ V L + L P ++ V
Sbjct: 395 LLDLIQTKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSL--DEPEARAAMIWIV 452
Query: 458 LSLATQDSDNPDLRDRGFIY-WRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVN 516
A + DN D F+ + ST +L + +L + T + L V++
Sbjct: 453 GEYAER-IDNADELLESFLDGFHDESTQVQLQLLTAIVKLFLKKPT---ETQELVQQVLS 508
Query: 517 C--MQTDNLELKKLVYLY 532
+DN +L+ Y+Y
Sbjct: 509 LATQDSDNPDLRDRGYIY 526
Score = 432 (157.1 bits), Expect = 5.2e-97, Sum P(2) = 5.2e-97
Identities = 82/89 (92%), Positives = 85/89 (95%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 87 AVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 146
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KL+DINAQLVEDQGFLD LKDL+SDSNPM
Sbjct: 147 KLHDINAQLVEDQGFLDTLKDLISDSNPM 175
Score = 378 (138.1 bits), Expect = 8.0e-72, Sum P(2) = 8.0e-72
Identities = 73/79 (92%), Positives = 79/79 (100%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESFL+GFHDE+TQVQLQLLTAIVKLFLK+PT+TQELVQQVLSLATQD
Sbjct: 454 EYAERIDNADELLESFLDGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQD 513
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRG+IYWRLLST
Sbjct: 514 SDNPDLRDRGYIYWRLLST 532
Score = 372 (136.0 bits), Expect = 2.3e-60, Sum P(2) = 2.3e-60
Identities = 96/202 (47%), Positives = 120/202 (59%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTTTKKGEIFELK ELNSD IASMTVGKDVSALFPDVVNCMQT
Sbjct: 1 MTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLFDLCS 116
DNLELKKLVYLYLMNYAKS PDMAIMA +TF + + + +R+ I + +
Sbjct: 61 DNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITE 120
Query: 117 SVGVFVKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTA 171
+ ++ C +D +P +R A+ V + I + + + L+ + D +P V
Sbjct: 121 YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMV---V 177
Query: 172 AVCVAKLYDINAQLVEDQGFLD 193
A VA L +I A+ LD
Sbjct: 178 ANRVAALSEI-AESHPSSNLLD 198
Score = 333 (122.3 bits), Expect = 9.2e-178, Sum P(2) = 9.2e-178
Identities = 62/70 (88%), Positives = 70/70 (100%)
Query: 814 QVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDN 873
+VNYVVQEAIVVIKDIFRKYPNKYE++I+TLCENLD+LDEPEARA+MIWI+GEYAERIDN
Sbjct: 402 KVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDN 461
Query: 874 ADELLESFLE 883
ADELLESFL+
Sbjct: 462 ADELLESFLD 471
Score = 55 (24.4 bits), Expect = 7.6e-38, Sum P(2) = 7.6e-38
Identities = 61/297 (20%), Positives = 118/297 (39%)
Query: 558 SNPLIRALAVRTMGCIRVDKITEYLCEPLRKC-LKDEDP-YVRKTAAVCVAKLYDINAQL 615
+ P + + +R + I V K E L ++ +K DP YV+ + +L A +
Sbjct: 294 AEPEPQYVPLRNINLI-VQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLAS-QANI 351
Query: 616 VEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLL-TALNE 674
+ L +LK+ ++ + V AV A+ + E T+ L+ T +N
Sbjct: 352 AQ---VLAELKEYATEVDVDFVRKAVRAIGR---CAIKVEQSAERCVSTLLDLIQTKVNY 405
Query: 675 CTEWGQVFILDSLSNYSPKDDREAQSICERITPR-LAHANAAVV------LSAVKVLMKL 727
+ V I D Y K + ++CE + A AA++ + +L
Sbjct: 406 VVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADEL 465
Query: 728 ME-MLPGEGDFVSTLTKKLAPPLVTLLSSEP-EVQYVALRNINLIVQK--RPDILKHEMK 783
+E L G D + + +L +V L +P E Q + + ++L Q PD+
Sbjct: 466 LESFLDGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGYI 525
Query: 784 VFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVI---KDIFRKYPNKY 837
+ + DP+ K L ++ + ++ + ++ E I I ++ K PN +
Sbjct: 526 YWRLLSTDPVAAKEVVLAEKPLISEETDLIEPT-LLDELICYIGTLASVYHKPPNAF 581
>UNIPROTKB|P52303 [details] [associations]
symbol:Ap1b1 "AP-1 complex subunit beta-1" species:10116
"Rattus norvegicus" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 RGD:2064 GO:GO:0005794 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
GO:GO:0006897 GO:GO:0030276 GO:GO:0030118 GO:GO:0048268
eggNOG:COG5096 HOGENOM:HOG000163270 HOVERGEN:HBG050515
GO:GO:0030131 GO:GO:0030665 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 CTD:162 KO:K12392 EMBL:M77245 IPI:IPI00201713
IPI:IPI00781585 PIR:B32105 RefSeq:NP_058973.1 UniGene:Rn.37383
PDB:1W63 PDBsum:1W63 ProteinModelPortal:P52303 SMR:P52303
IntAct:P52303 MINT:MINT-1344522 STRING:P52303 PhosphoSite:P52303
PRIDE:P52303 GeneID:29663 KEGG:rno:29663 UCSC:RGD:2064
EvolutionaryTrace:P52303 NextBio:609967 ArrayExpress:P52303
Genevestigator:P52303 GermOnline:ENSRNOG00000008786 Uniprot:P52303
Length = 949
Score = 1415 (503.2 bits), Expect = 9.2e-178, Sum P(2) = 9.2e-178
Identities = 285/337 (84%), Positives = 304/337 (90%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVNTFVKDCE
Sbjct: 37 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCE 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINAQLV
Sbjct: 97 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLV 156
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
EDQGFLD LKDL+SDSNPMVVAN VAALSE+ E+ S L+++ AQ+INKLLTALNECT
Sbjct: 157 EDQGFLDTLKDLISDSNPMVVANRVAALSEIAESHPSS-NLLDLKAQSINKLLTALNECT 215
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EW Q+FILD L NY PKDDREAQSICER+TPRL+HAN+AVVLSAVKVLMK MEML + D
Sbjct: 216 EWAQIFILDCLGNYMPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLSKDLD 275
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ +TL KKLAPPLVTLLS+EPE QYV LRNINLIVQKRP+ILKHEMKVFFVKYNDPIYVK
Sbjct: 276 YYATLLKKLAPPLVTLLSAEPEPQYVPLRNINLIVQKRPEILKHEMKVFFVKYNDPIYVK 335
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
LEKLDIMIRLASQANIAQV ++E A V D RK
Sbjct: 336 LEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRK 372
Score = 594 (214.2 bits), Expect = 5.2e-97, Sum P(2) = 5.2e-97
Identities = 142/258 (55%), Positives = 171/258 (66%)
Query: 278 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYV 337
D+ +TL KKLAPPLVTLLS+EPE QYV LRNINLIVQKRP+ILKHEMKVFFVKYNDPIYV
Sbjct: 275 DYYATLLKKLAPPLVTLLSAEPEPQYVPLRNINLIVQKRPEILKHEMKVFFVKYNDPIYV 334
Query: 338 KLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 397
KLEKLDIMIRLASQANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST
Sbjct: 335 KLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 394
Query: 398 LLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQV 457
LLDLIQTK + A +++ + ++ V L + L P ++ V
Sbjct: 395 LLDLIQTKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSL--DEPEARAAMIWIV 452
Query: 458 LSLATQDSDNPDLRDRGFIY-WRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVN 516
A + DN D F+ + ST +L + +L + T + L V++
Sbjct: 453 GEYAER-IDNADELLESFLDGFHDESTQVQLQLLTAIVKLFLKKPT---ETQELVQQVLS 508
Query: 517 C--MQTDNLELKKLVYLY 532
+DN +L+ Y+Y
Sbjct: 509 LATQDSDNPDLRDRGYIY 526
Score = 432 (157.1 bits), Expect = 5.2e-97, Sum P(2) = 5.2e-97
Identities = 82/89 (92%), Positives = 85/89 (95%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 87 AVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 146
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KL+DINAQLVEDQGFLD LKDL+SDSNPM
Sbjct: 147 KLHDINAQLVEDQGFLDTLKDLISDSNPM 175
Score = 378 (138.1 bits), Expect = 8.0e-72, Sum P(2) = 8.0e-72
Identities = 73/79 (92%), Positives = 79/79 (100%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESFL+GFHDE+TQVQLQLLTAIVKLFLK+PT+TQELVQQVLSLATQD
Sbjct: 454 EYAERIDNADELLESFLDGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQD 513
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRG+IYWRLLST
Sbjct: 514 SDNPDLRDRGYIYWRLLST 532
Score = 372 (136.0 bits), Expect = 2.3e-60, Sum P(2) = 2.3e-60
Identities = 96/202 (47%), Positives = 120/202 (59%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTTTKKGEIFELK ELNSD IASMTVGKDVSALFPDVVNCMQT
Sbjct: 1 MTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLFDLCS 116
DNLELKKLVYLYLMNYAKS PDMAIMA +TF + + + +R+ I + +
Sbjct: 61 DNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITE 120
Query: 117 SVGVFVKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTA 171
+ ++ C +D +P +R A+ V + I + + + L+ + D +P V
Sbjct: 121 YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMV---V 177
Query: 172 AVCVAKLYDINAQLVEDQGFLD 193
A VA L +I A+ LD
Sbjct: 178 ANRVAALSEI-AESHPSSNLLD 198
Score = 333 (122.3 bits), Expect = 9.2e-178, Sum P(2) = 9.2e-178
Identities = 62/70 (88%), Positives = 70/70 (100%)
Query: 814 QVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDN 873
+VNYVVQEAIVVIKDIFRKYPNKYE++I+TLCENLD+LDEPEARA+MIWI+GEYAERIDN
Sbjct: 402 KVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDN 461
Query: 874 ADELLESFLE 883
ADELLESFL+
Sbjct: 462 ADELLESFLD 471
Score = 55 (24.4 bits), Expect = 7.6e-38, Sum P(2) = 7.6e-38
Identities = 61/297 (20%), Positives = 118/297 (39%)
Query: 558 SNPLIRALAVRTMGCIRVDKITEYLCEPLRKC-LKDEDP-YVRKTAAVCVAKLYDINAQL 615
+ P + + +R + I V K E L ++ +K DP YV+ + +L A +
Sbjct: 294 AEPEPQYVPLRNINLI-VQKRPEILKHEMKVFFVKYNDPIYVKLEKLDIMIRLAS-QANI 351
Query: 616 VEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLL-TALNE 674
+ L +LK+ ++ + V AV A+ + E T+ L+ T +N
Sbjct: 352 AQ---VLAELKEYATEVDVDFVRKAVRAIGR---CAIKVEQSAERCVSTLLDLIQTKVNY 405
Query: 675 CTEWGQVFILDSLSNYSPKDDREAQSICERITPR-LAHANAAVV------LSAVKVLMKL 727
+ V I D Y K + ++CE + A AA++ + +L
Sbjct: 406 VVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADEL 465
Query: 728 ME-MLPGEGDFVSTLTKKLAPPLVTLLSSEP-EVQYVALRNINLIVQK--RPDILKHEMK 783
+E L G D + + +L +V L +P E Q + + ++L Q PD+
Sbjct: 466 LESFLDGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQDSDNPDLRDRGYI 525
Query: 784 VFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVI---KDIFRKYPNKY 837
+ + DP+ K L ++ + ++ + ++ E I I ++ K PN +
Sbjct: 526 YWRLLSTDPVAAKEVVLAEKPLISEETDLIEPT-LLDELICYIGTLASVYHKPPNAF 581
>FB|FBgn0010380 [details] [associations]
symbol:AP-1-2beta "Adaptor Protein complex 1/2, beta subunit"
species:7227 "Drosophila melanogaster" [GO:0005905 "coated pit"
evidence=IDA] [GO:0030119 "AP-type membrane coat adaptor complex"
evidence=IDA] [GO:0030121 "AP-1 adaptor complex" evidence=ISS;NAS]
[GO:0007269 "neurotransmitter secretion" evidence=NAS] [GO:0008021
"synaptic vesicle" evidence=TAS] [GO:0016183 "synaptic vesicle
coating" evidence=TAS] [GO:0006901 "vesicle coating" evidence=TAS]
[GO:0030135 "coated vesicle" evidence=TAS] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030136 "clathrin-coated vesicle"
evidence=IDA] [GO:0048749 "compound eye development" evidence=IMP]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0008021 EMBL:AE014298
GO:GO:0005905 GO:GO:0007269 eggNOG:COG5096 GO:GO:0030131
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 KO:K12392
GeneTree:ENSGT00530000063138 OMA:YDISATM GO:GO:0030119
GO:GO:0016183 GO:GO:0048749 EMBL:BT016054 EMBL:X75910 PIR:S39295
RefSeq:NP_523415.1 UniGene:Dm.2885 SMR:Q24253 DIP:DIP-20749N
IntAct:Q24253 MINT:MINT-316769 STRING:Q24253
EnsemblMetazoa:FBtr0074789 GeneID:32987 KEGG:dme:Dmel_CG12532
UCSC:CG12532-RA CTD:32987 FlyBase:FBgn0010380 InParanoid:Q24253
OrthoDB:EOG4GHX41 GenomeRNAi:32987 NextBio:781377 Uniprot:Q24253
Length = 921
Score = 1511 (537.0 bits), Expect = 5.6e-155, P = 5.6e-155
Identities = 303/337 (89%), Positives = 317/337 (94%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVNTFVKDCE
Sbjct: 37 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCE 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDI+A +V
Sbjct: 97 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDISATMV 156
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
EDQGFLDQLKDLLSDSNPMVVANAVAALSE+NEAS SG L+EMN+ TINKLLTALNECT
Sbjct: 157 EDQGFLDQLKDLLSDSNPMVVANAVAALSEINEASQSGQPLVEMNSVTINKLLTALNECT 216
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQVFILDSL+NYSPKD+REAQSICERITPRLAHANAAVVLSAVKVLMKL+EML + D
Sbjct: 217 EWGQVFILDSLANYSPKDEREAQSICERITPRLAHANAAVVLSAVKVLMKLLEMLSSDSD 276
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
F +TLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK
Sbjct: 277 FCATLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 336
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
LEKLDIMIRLA+Q+NIAQV ++E A V D RK
Sbjct: 337 LEKLDIMIRLANQSNIAQVLSELKEYATEVDVDFVRK 373
Score = 609 (219.4 bits), Expect = 8.8e-136, Sum P(3) = 8.8e-136
Identities = 123/130 (94%), Positives = 127/130 (97%)
Query: 276 EGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPI 335
+ DF +TLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPI
Sbjct: 274 DSDFCATLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPI 333
Query: 336 YVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCV 395
YVKLEKLDIMIRLA+Q+NIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVE SAERCV
Sbjct: 334 YVKLEKLDIMIRLANQSNIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEPSAERCV 393
Query: 396 STLLDLIQTK 405
STLLDLIQTK
Sbjct: 394 STLLDLIQTK 403
Score = 437 (158.9 bits), Expect = 8.8e-136, Sum P(3) = 8.8e-136
Identities = 83/89 (93%), Positives = 86/89 (96%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 87 AVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 146
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KLYDI+A +VEDQGFLDQLKDLLSDSNPM
Sbjct: 147 KLYDISATMVEDQGFLDQLKDLLSDSNPM 175
Score = 382 (139.5 bits), Expect = 5.4e-130, Sum P(3) = 5.4e-130
Identities = 95/191 (49%), Positives = 118/191 (61%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTTTKKGEIFELK ELN+D IASMTVGKDVSALFPDVVNCMQT
Sbjct: 1 MTDSKYFTTTKKGEIFELKSELNNDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLFDLCS 116
DNLELKKLVYLYLMNYAKS PDMAIMA +TF + S+ + +R+ I + +
Sbjct: 61 DNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITE 120
Query: 117 SVGVFVKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTA 171
+ ++ C +D +P +R A+ V + I + + + L+ L D +P V
Sbjct: 121 YLCEPLRKCLKDEDPYVRKTAAVCVAKLYDISATMVEDQGFLDQLKDLLSDSNPMV---V 177
Query: 172 AVCVAKLYDIN 182
A VA L +IN
Sbjct: 178 ANAVAALSEIN 188
Score = 370 (135.3 bits), Expect = 8.8e-136, Sum P(3) = 8.8e-136
Identities = 72/79 (91%), Positives = 76/79 (96%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELL+SFLEGF DEN QVQLQLLTA+VKLFLKRP+DTQELVQ VLSLATQD
Sbjct: 455 EYAERIDNADELLDSFLEGFQDENAQVQLQLLTAVVKLFLKRPSDTQELVQHVLSLATQD 514
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRGFIYWRLLST
Sbjct: 515 SDNPDLRDRGFIYWRLLST 533
Score = 353 (129.3 bits), Expect = 1.4e-28, P = 1.4e-28
Identities = 118/355 (33%), Positives = 173/355 (48%)
Query: 552 VKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTAAVCVA 606
++ C +D +P +R A+ V + I + + + L+ L D +P V A VA
Sbjct: 126 LRKCLKDEDPYVRKTAAVCVAKLYDISATMVEDQGFLDQLKDLLSDSNPMV---VANAVA 182
Query: 607 KLYDINAQLVEDQGFLDQ----LKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNA 662
L +IN Q ++ + LL+ N V L + S +
Sbjct: 183 ALSEINEASQSGQPLVEMNSVTINKLLTALNECTEWGQVFILDSLANYSPKDEREAQSIC 242
Query: 663 QTINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAA------V 716
+ I L N V +L L D ++ +++ P L ++ V
Sbjct: 243 ERITPRLAHANAAVVLSAVKVLMKLLEMLSSDSDFCATLTKKLAPPLVTLLSSEPEVQYV 302
Query: 717 VLSAVKVLM-KLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRP 775
L + +++ K ++L E + K P+ L + ++ + L N + I Q
Sbjct: 303 ALRNINLIVQKRPDILKHE---MKVFFVKYNDPIYVKLE-KLDIM-IRLANQSNIAQVLS 357
Query: 776 DILKH--EMKVFFVKYN----DPIYVKLE-KLDIMIRLASQANIAQVNYVVQEAIVVIKD 828
++ ++ E+ V FV+ +K+E + + +VNYVVQEAIVVIKD
Sbjct: 358 ELKEYATEVDVDFVRKAVRAIGRCAIKVEPSAERCVSTLLDLIQTKVNYVVQEAIVVIKD 417
Query: 829 IFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFLE 883
IFRKYPNKYE+IISTLCENLDTLDEPEARASM+WIIGEYAERIDNADELL+SFLE
Sbjct: 418 IFRKYPNKYESIISTLCENLDTLDEPEARASMVWIIGEYAERIDNADELLDSFLE 472
Score = 55 (24.4 bits), Expect = 1.0e-72, Sum P(3) = 1.0e-72
Identities = 15/61 (24%), Positives = 30/61 (49%)
Query: 309 INLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLSELKEYATEV 368
+N +VQ+ ++K + + KY I E LD + ++A++ ++ E YA +
Sbjct: 404 VNYVVQEAIVVIKDIFRKYPNKYESIISTLCENLDTLDEPEARASMVWIIGE---YAERI 460
Query: 369 D 369
D
Sbjct: 461 D 461
>DICTYBASE|DDB_G0279141 [details] [associations]
symbol:ap1b1 "beta adaptin" species:44689
"Dictyostelium discoideum" [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0030665 "clathrin-coated
vesicle membrane" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 dictyBase:DDB_G0279141 GO:GO:0005794
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GenomeReviews:CM000152_GR GO:GO:0008565
GO:GO:0006897 EMBL:AAFI02000027 eggNOG:COG5096 GO:GO:0030131
GO:GO:0030665 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 KO:K12392 RefSeq:XP_641846.1 HSSP:P63010
ProteinModelPortal:Q54X82 SMR:Q54X82 STRING:Q54X82 PRIDE:Q54X82
EnsemblProtists:DDB0234067 GeneID:8621892 KEGG:ddi:DDB_G0279141
OMA:SDPNPLI ProtClustDB:CLSZ2735785 Uniprot:Q54X82
Length = 942
Score = 1177 (419.4 bits), Expect = 2.2e-150, Sum P(2) = 2.2e-150
Identities = 228/319 (71%), Positives = 270/319 (84%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIA+MTVGKDVS LF V+NCMQT NLELKKLVYLY+MNYAK+HPD AI+AVNTF KD
Sbjct: 37 VIAAMTVGKDVSMLFTHVLNCMQTHNLELKKLVYLYVMNYAKNHPDRAILAVNTFQKDAS 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVD ITE+LCEPLR LKD+DPYVRKTAAVCVAKLYD+N +LV
Sbjct: 97 DPNPLIRALAVRTMGCIRVDNITEHLCEPLRHALKDQDPYVRKTAAVCVAKLYDVNPELV 156
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
E+QGFL+ L DLL DSNPMVVANAVA+L+E++E S V +++ +NKLL ALNECT
Sbjct: 157 ENQGFLNILNDLLGDSNPMVVANAVASLTEIDEVSKKEV--FRIHSGNLNKLLAALNECT 214
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQVFIL+SL Y+P+D +EA+++CER+ PRL HAN+AVVLSAVKVLMK M + G D
Sbjct: 215 EWGQVFILNSLCKYTPRDSQEAENVCERVAPRLQHANSAVVLSAVKVLMKYMNSI-GNND 273
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ KK+APPLVTLLS EPE+Q++ LRNINLIVQKRP+IL++EMKVFF KYNDPIYVK
Sbjct: 274 VIRLFCKKMAPPLVTLLSKEPEIQFLGLRNINLIVQKRPEILQYEMKVFFCKYNDPIYVK 333
Query: 797 LEKLDIMIRLASQANIAQV 815
+EKL+IMI LA++ NI +V
Sbjct: 334 MEKLEIMIMLANEKNIEEV 352
Score = 760 (272.6 bits), Expect = 2.1e-75, P = 2.1e-75
Identities = 209/549 (38%), Positives = 296/549 (53%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
M+DSKYF TTKKGEI ELK EL S IA+MTVGKDVS LF V+NCMQT
Sbjct: 1 MSDSKYFQTTKKGEIHELKEELLSQREDKKKEAVKKVIAAMTVGKDVSMLFTHVLNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQKSSSSFQCMIDIRSIPLFDLCSSVGV 120
NLELKKLVYLY+MNYAK+HPD AI+A +TF QK +S +I ++ C V
Sbjct: 61 HNLELKKLVYLYVMNYAKNHPDRAILAVNTF--QKDASDPNPLIRALAVRTMG-CIRVDN 117
Query: 121 FVKD-CE-------DSNPLIR---ALAVRTMGCIRVDKI-TEYLCEPLRKCLKDEDPYVR 168
+ CE D +P +R A+ V + + + + + L L D +P V
Sbjct: 118 ITEHLCEPLRHALKDQDPYVRKTAAVCVAKLYDVNPELVENQGFLNILNDLLGDSNPMVV 177
Query: 169 KTAAVCVAKLYDINAQLVE--DQGFLDQLKDLLSDSNPMXXXXXXXXX-XXXPRKSYWQR 225
A + ++ +++ + V G L++L L++ PR S
Sbjct: 178 ANAVASLTEIDEVSKKEVFRIHSGNLNKLLAALNECTEWGQVFILNSLCKYTPRDSQEAE 237
Query: 226 NLSSRKKQICWNLPYLMNLSVIYPAWPLSTINPHTPXXXXXXXXXXXXPGEGDFVSTLTK 285
N+ R + L + N +V+ LS + G D + K
Sbjct: 238 NVCER---VAPRLQHA-NSAVV-----LSAVK--------VLMKYMNSIGNNDVIRLFCK 280
Query: 286 KLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIM 345
K+APPLVTLLS EPE+Q++ LRNINLIVQKRP+IL++EMKVFF KYNDPIYVK+EKL+IM
Sbjct: 281 KMAPPLVTLLSKEPEIQFLGLRNINLIVQKRPEILQYEMKVFFCKYNDPIYVKMEKLEIM 340
Query: 346 IRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK 405
I LA++ NI +VL E KEYATE+DV+FVRKAVRAIGRCAIK+++++ERC+ LLDLIQTK
Sbjct: 341 IMLANEKNIEEVLLEFKEYATEIDVEFVRKAVRAIGRCAIKIDRASERCIQVLLDLIQTK 400
Query: 406 YAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQDS 465
+ A +++ + ++ + + L A ++ L P ++ ++ +
Sbjct: 401 VNYVVQEAIIVIKDIFRKYPNKYEGI-IATLCANLES-LDEPEAKASMIW-IIGEYAERI 457
Query: 466 DNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNC--MQTDNL 523
DN F+ N+ L LT +V + KD + V+N ++DN
Sbjct: 458 DNAHELLNSFLEG--FKDENSQVQLQLLTSIVKLFLKRPKDAQQMVQTVLNLSTQESDNP 515
Query: 524 ELKKLVYLY 532
+L+ ++Y
Sbjct: 516 DLRDRGFVY 524
Score = 335 (123.0 bits), Expect = 1.3e-26, P = 1.3e-26
Identities = 64/79 (81%), Positives = 73/79 (92%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNA ELL SFLEGF DEN+QVQLQLLT+IVKLFLKRP D Q++VQ VL+L+TQ+
Sbjct: 452 EYAERIDNAHELLNSFLEGFKDENSQVQLQLLTSIVKLFLKRPKDAQQMVQTVLNLSTQE 511
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRGF+YWRLLST
Sbjct: 512 SDNPDLRDRGFVYWRLLST 530
Score = 312 (114.9 bits), Expect = 2.2e-150, Sum P(2) = 2.2e-150
Identities = 60/70 (85%), Positives = 66/70 (94%)
Query: 814 QVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDN 873
+VNYVVQEAI+VIKDIFRKYPNKYE II+TLC NL++LDEPEA+ASMIWIIGEYAERIDN
Sbjct: 400 KVNYVVQEAIIVIKDIFRKYPNKYEGIIATLCANLESLDEPEAKASMIWIIGEYAERIDN 459
Query: 874 ADELLESFLE 883
A ELL SFLE
Sbjct: 460 AHELLNSFLE 469
>ZFIN|ZDB-GENE-061025-1 [details] [associations]
symbol:ap1b1 "adaptor-related protein complex 1, beta
1 subunit" species:7955 "Danio rerio" [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 ZFIN:ZDB-GENE-061025-1 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 eggNOG:COG5096 HOGENOM:HOG000163270
HOVERGEN:HBG050515 OrthoDB:EOG4PG607 GO:GO:0030131
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 CTD:162 KO:K12392
OMA:PGNPSCT GeneTree:ENSGT00530000063138 EMBL:BX664747
IPI:IPI00897502 RefSeq:NP_001122002.1 UniGene:Dr.31764 SMR:A5PMS9
Ensembl:ENSDART00000022518 Ensembl:ENSDART00000137128 GeneID:562166
KEGG:dre:562166 NextBio:20884280 Uniprot:A5PMS9
Length = 947
Score = 1440 (512.0 bits), Expect = 1.9e-147, P = 1.9e-147
Identities = 287/337 (85%), Positives = 310/337 (91%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVNTFVKDCE
Sbjct: 37 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCE 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINAQLV
Sbjct: 97 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLV 156
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
EDQGFLD LKDL+SDSNPMVVANAVAALSE+ E+ + L+++N QTINKLLTALNECT
Sbjct: 157 EDQGFLDTLKDLISDSNPMVVANAVAALSEIAESHPNS-NLLDLNPQTINKLLTALNECT 215
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQ+FILD L+NY+P+DDRE+QSICER+TPRL+HAN+AVVLSAVKVLMK MEMLP + D
Sbjct: 216 EWGQIFILDCLANYTPRDDRESQSICERVTPRLSHANSAVVLSAVKVLMKFMEMLPKDLD 275
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ TL KKLAPPLVTLLS+EPE+QYVALRNINLIVQKRP+ILKHEMKVFFVKYNDPIYVK
Sbjct: 276 YYGTLLKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYNDPIYVK 335
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
LEKLDIMIRLASQANIAQV ++E A V D RK
Sbjct: 336 LEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRK 372
Score = 605 (218.0 bits), Expect = 1.0e-100, Sum P(3) = 1.0e-100
Identities = 144/262 (54%), Positives = 174/262 (66%)
Query: 274 PGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYND 333
P + D+ TL KKLAPPLVTLLS+EPE+QYVALRNINLIVQKRP+ILKHEMKVFFVKYND
Sbjct: 271 PKDLDYYGTLLKKLAPPLVTLLSAEPELQYVALRNINLIVQKRPEILKHEMKVFFVKYND 330
Query: 334 PIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 393
PIYVKLEKLDIMIRLASQANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER
Sbjct: 331 PIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 390
Query: 394 CVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQEL 453
CVSTLLDLIQTK + A +++ + ++ V L + L P +
Sbjct: 391 CVSTLLDLIQTKVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSL--DEPEARAAM 448
Query: 454 VQQVLSLATQDSDNPDLRDRGFIY-WRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFP 512
+ V A + DN D F+ + ST +L + +L + T + L
Sbjct: 449 IWIVGEYAER-IDNADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPT---ETQELVQ 504
Query: 513 DVVNC--MQTDNLELKKLVYLY 532
V++ +DN +L+ Y+Y
Sbjct: 505 QVLSLATQDSDNPDLRDRGYIY 526
Score = 432 (157.1 bits), Expect = 1.0e-100, Sum P(3) = 1.0e-100
Identities = 82/89 (92%), Positives = 85/89 (95%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 87 AVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 146
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KL+DINAQLVEDQGFLD LKDL+SDSNPM
Sbjct: 147 KLHDINAQLVEDQGFLDTLKDLISDSNPM 175
Score = 381 (139.2 bits), Expect = 7.2e-73, Sum P(3) = 7.2e-73
Identities = 74/79 (93%), Positives = 79/79 (100%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESFLEGFHDE+TQVQLQLLTAIVKLFLK+PT+TQELVQQVLSLATQD
Sbjct: 454 EYAERIDNADELLESFLEGFHDESTQVQLQLLTAIVKLFLKKPTETQELVQQVLSLATQD 513
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRG+IYWRLLST
Sbjct: 514 SDNPDLRDRGYIYWRLLST 532
Score = 377 (137.8 bits), Expect = 6.0e-95, Sum P(3) = 6.0e-95
Identities = 91/198 (45%), Positives = 121/198 (61%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTTTKKGEIFELK ELNSD IASMTVGKDVSALFPDVVNCMQT
Sbjct: 1 MTDSKYFTTTKKGEIFELKAELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLFDLCS 116
DNLELKKLVYLYLMNYAKS PDMAIMA +TF + + + +R+ I + +
Sbjct: 61 DNLELKKLVYLYLMNYAKSQPDMAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRVDKITE 120
Query: 117 SVGVFVKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTA 171
+ ++ C +D +P +R A+ V + I + + + L+ + D +P V A
Sbjct: 121 YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANA 180
Query: 172 AVCVAKLYDI--NAQLVE 187
++++ + N+ L++
Sbjct: 181 VAALSEIAESHPNSNLLD 198
Score = 342 (125.4 bits), Expect = 2.3e-27, P = 2.3e-27
Identities = 108/356 (30%), Positives = 183/356 (51%)
Query: 552 VKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTAAVCVA 606
++ C +D +P +R A+ V + I + + + L+ + D +P V A ++
Sbjct: 126 LRKCLKDEDPYVRKTAAVCVAKLHDINAQLVEDQGFLDTLKDLISDSNPMVVANAVAALS 185
Query: 607 KLYDI--NAQLVE-DQGFLDQLKDLLSDSNP---MVVANAVAALSEMNEASTSGVALIEM 660
++ + N+ L++ + +++L L++ + + + +A + ++ + +
Sbjct: 186 EIAESHPNSNLLDLNPQTINKLLTALNECTEWGQIFILDCLANYTPRDDRESQSIC---- 241
Query: 661 NAQTINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAA----- 715
+ + L+ N V +L PKD ++ +++ P L +A
Sbjct: 242 --ERVTPRLSHANSAVVLSAVKVLMKFMEMLPKDLDYYGTLLKKLAPPLVTLLSAEPELQ 299
Query: 716 -VVLSAVKVLM-KLMEMLPGEGDFVSTLTKKLAPPL-VTLLSSEPEVQYVALRNINLIVQ 772
V L + +++ K E+L E + K P+ V L + ++ + NI ++
Sbjct: 300 YVALRNINLIVQKRPEILKHE---MKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLA 356
Query: 773 KRPDILKHEMKVFFVKYN----DPIYVKLEK-LDIMIRLASQANIAQVNYVVQEAIVVIK 827
+ + E+ V FV+ +K+E+ + + +VNYVVQEAIVVIK
Sbjct: 357 ELKEYAT-EVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIK 415
Query: 828 DIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFLE 883
DIFRKYPNKYE++I+TLCENLD+LDEPEARA+MIWI+GEYAERIDNADELLESFLE
Sbjct: 416 DIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERIDNADELLESFLE 471
Score = 52 (23.4 bits), Expect = 1.0e-100, Sum P(3) = 1.0e-100
Identities = 12/36 (33%), Positives = 20/36 (55%)
Query: 730 MLPGEGDFVSTLTK-KLAPPLVTLLSSEPEVQYVAL 764
++P +GD + L LAP T+ S +P +Q A+
Sbjct: 620 VIPSQGDLLGDLLNLDLAPATTTVPSVQPSMQMGAM 655
Score = 49 (22.3 bits), Expect = 3.2e-37, Sum P(2) = 3.2e-37
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 274 PGEGDFVSTLTK-KLAPPLVTLLSSEPEVQYVAL 306
P +GD + L LAP T+ S +P +Q A+
Sbjct: 622 PSQGDLLGDLLNLDLAPATTTVPSVQPSMQMGAM 655
Score = 38 (18.4 bits), Expect = 4.6e-36, Sum P(2) = 4.6e-36
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 249 PAWPLSTINPHTP 261
PA PL + P TP
Sbjct: 776 PAGPLQVLTPLTP 788
>UNIPROTKB|P63009 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9913 "Bos
taurus" [GO:0005215 "transporter activity" evidence=TAS]
[GO:0005905 "coated pit" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 GO:GO:0005886
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0005905 GO:GO:0005215
UniGene:Bt.88309 HOGENOM:HOG000163270 HOVERGEN:HBG050515
GO:GO:0030131 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 EMBL:M34177 IPI:IPI00845219 PIR:B35553
ProteinModelPortal:P63009 SMR:P63009 DIP:DIP-44826N STRING:P63009
Uniprot:P63009
Length = 937
Score = 1416 (503.5 bits), Expect = 6.6e-145, P = 6.6e-145
Identities = 280/337 (83%), Positives = 308/337 (91%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIA+MTVGKDVS+LFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVN+FVKDCE
Sbjct: 37 VIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCE 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINAQ+V
Sbjct: 97 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMV 156
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
EDQGFLD L+DL++DSNPMVVANAVAALSE++E+ + L+++N Q INKLLTALNECT
Sbjct: 157 EDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNS-NLLDLNPQNINKLLTALNECT 215
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQ+FILD LSNY+PKDDREAQSICER+TPRL+HAN+AVVLSAVKVLMK +E+LP E D
Sbjct: 216 EWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKESD 275
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ + L KKLAPPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYNDPIYVK
Sbjct: 276 YYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVK 335
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
LEKLDIMIRLASQANIAQV ++E A V D RK
Sbjct: 336 LEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRK 372
Score = 597 (215.2 bits), Expect = 4.7e-98, Sum P(3) = 4.7e-98
Identities = 141/261 (54%), Positives = 170/261 (65%)
Query: 274 PGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYND 333
P E D+ + L KKLAPPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYND
Sbjct: 271 PKESDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYND 330
Query: 334 PIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 393
PIYVKLEKLDIMIRLASQANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER
Sbjct: 331 PIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 390
Query: 394 CVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQEL 453
CVSTLLDLIQTK + A ++ + ++ + L + L P D +
Sbjct: 391 CVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSL--DEP-DARAA 447
Query: 454 VQQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPD 513
+ ++ + DN D F+ +T L LT +V + + L
Sbjct: 448 MIWIVGEYAERIDNADELLESFLEG--FHDESTQVQLTLLTAIVKLFLKKPSETQELVQQ 505
Query: 514 VVNC--MQTDNLELKKLVYLY 532
V++ +DN +L+ Y+Y
Sbjct: 506 VLSLATQDSDNPDLRDRGYIY 526
Score = 423 (154.0 bits), Expect = 4.7e-98, Sum P(3) = 4.7e-98
Identities = 79/89 (88%), Positives = 85/89 (95%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 87 AVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 146
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KL+DINAQ+VEDQGFLD L+DL++DSNPM
Sbjct: 147 KLHDINAQMVEDQGFLDSLRDLIADSNPM 175
Score = 371 (135.7 bits), Expect = 2.2e-70, Sum P(3) = 2.2e-70
Identities = 72/79 (91%), Positives = 78/79 (98%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESFLEGFHDE+TQVQL LLTAIVKLFLK+P++TQELVQQVLSLATQD
Sbjct: 454 EYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQD 513
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRG+IYWRLLST
Sbjct: 514 SDNPDLRDRGYIYWRLLST 532
Score = 358 (131.1 bits), Expect = 3.2e-91, Sum P(3) = 3.2e-91
Identities = 86/198 (43%), Positives = 120/198 (60%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTT KKGEIFELK ELN++ IA+MTVGKDVS+LFPDVVNCMQT
Sbjct: 1 MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLFDLCS 116
DNLELKKLVYLYLMNYAKS PDMAIMA ++F + + + +R+ I + +
Sbjct: 61 DNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITE 120
Query: 117 SVGVFVKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTA 171
+ ++ C +D +P +R A+ V + I + + + LR + D +P V A
Sbjct: 121 YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANA 180
Query: 172 AVCVAKLYDI--NAQLVE 187
++++ + N+ L++
Sbjct: 181 VAALSEISESHPNSNLLD 198
Score = 341 (125.1 bits), Expect = 3.0e-27, P = 3.0e-27
Identities = 109/353 (30%), Positives = 176/353 (49%)
Query: 552 VKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTAAVCVA 606
++ C +D +P +R A+ V + I + + + LR + D +P V A ++
Sbjct: 126 LRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALS 185
Query: 607 KLYDI--NAQLVE-DQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQ 663
++ + N+ L++ + +++L L++ + LS N I +
Sbjct: 186 EISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSI---CE 242
Query: 664 TINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAA------VV 717
+ L+ N V +L PK+ + +++ P L + V
Sbjct: 243 RVTPRLSHANSAVVLSAVKVLMKFLELLPKESDYYNMLLKKLAPPLVTLLSGEPEVQYVA 302
Query: 718 LSAVKVLM-KLMEMLPGEGDFVSTLTKKLAPPL-VTLLSSEPEVQYVALRNINLIVQKRP 775
L + +++ K E+L E + K P+ V L + ++ + NI ++ +
Sbjct: 303 LRNINLIVQKRPEILKQE---IKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELK 359
Query: 776 DILKHEMKVFFVKYN----DPIYVKLEK-LDIMIRLASQANIAQVNYVVQEAIVVIKDIF 830
+ E+ V FV+ +K+E+ + + +VNYVVQEAIVVI+DIF
Sbjct: 360 EYAT-EVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIF 418
Query: 831 RKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFLE 883
RKYPNKYE+II+TLCENLD+LDEP+ARA+MIWI+GEYAERIDNADELLESFLE
Sbjct: 419 RKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLE 471
Score = 48 (22.0 bits), Expect = 4.7e-98, Sum P(3) = 4.7e-98
Identities = 28/123 (22%), Positives = 51/123 (41%)
Query: 748 PLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLA 807
PL TL P ++ L N+ + V+ D+ + N ++V+ K++ + LA
Sbjct: 787 PLNTL---GPVMKMEPLNNLQVAVKNNIDVFYFSC---LIPLN-VLFVEDGKMERQVFLA 839
Query: 808 SQANIAQVN---YVVQEAIVVIKDIFRKYPNK-YETIISTLCENLDTLDEPEARASMIWI 863
+ +I N + ++E + + K N TI E D L + + IWI
Sbjct: 840 TWKDIPNENELQFQIKECHLNADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWI 899
Query: 864 IGE 866
+ E
Sbjct: 900 LAE 902
>UNIPROTKB|Q08DS7 [details] [associations]
symbol:AP2B1 "AP-1 complex subunit beta-1" species:9913
"Bos taurus" [GO:0030665 "clathrin-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0030131 "clathrin
adaptor complex" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 GO:GO:0005794
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 GO:GO:0006897 EMBL:BC123583 IPI:IPI00696360
RefSeq:NP_001068593.1 UniGene:Bt.88309 ProteinModelPortal:Q08DS7
SMR:Q08DS7 STRING:Q08DS7 PRIDE:Q08DS7 GeneID:282183 KEGG:bta:282183
CTD:163 eggNOG:COG5096 HOGENOM:HOG000163270 HOVERGEN:HBG050515
InParanoid:Q08DS7 KO:K11825 OrthoDB:EOG4PG607 NextBio:20806011
GO:GO:0030131 GO:GO:0030665 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 Uniprot:Q08DS7
Length = 951
Score = 1416 (503.5 bits), Expect = 6.6e-145, P = 6.6e-145
Identities = 280/337 (83%), Positives = 308/337 (91%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIA+MTVGKDVS+LFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVN+FVKDCE
Sbjct: 37 VIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCE 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINAQ+V
Sbjct: 97 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMV 156
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
EDQGFLD L+DL++DSNPMVVANAVAALSE++E+ + L+++N Q INKLLTALNECT
Sbjct: 157 EDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNS-NLLDLNPQNINKLLTALNECT 215
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQ+FILD LSNY+PKDDREAQSICER+TPRL+HAN+AVVLSAVKVLMK +E+LP E D
Sbjct: 216 EWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKESD 275
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ + L KKLAPPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYNDPIYVK
Sbjct: 276 YYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVK 335
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
LEKLDIMIRLASQANIAQV ++E A V D RK
Sbjct: 336 LEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRK 372
Score = 597 (215.2 bits), Expect = 6.4e-98, Sum P(3) = 6.4e-98
Identities = 141/261 (54%), Positives = 170/261 (65%)
Query: 274 PGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYND 333
P E D+ + L KKLAPPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYND
Sbjct: 271 PKESDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYND 330
Query: 334 PIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 393
PIYVKLEKLDIMIRLASQANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER
Sbjct: 331 PIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 390
Query: 394 CVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQEL 453
CVSTLLDLIQTK + A ++ + ++ + L + L P D +
Sbjct: 391 CVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSL--DEP-DARAA 447
Query: 454 VQQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPD 513
+ ++ + DN D F+ +T L LT +V + + L
Sbjct: 448 MIWIVGEYAERIDNADELLESFLEG--FHDESTQVQLTLLTAIVKLFLKKPSETQELVQQ 505
Query: 514 VVNC--MQTDNLELKKLVYLY 532
V++ +DN +L+ Y+Y
Sbjct: 506 VLSLATQDSDNPDLRDRGYIY 526
Score = 423 (154.0 bits), Expect = 6.4e-98, Sum P(3) = 6.4e-98
Identities = 79/89 (88%), Positives = 85/89 (95%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 87 AVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 146
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KL+DINAQ+VEDQGFLD L+DL++DSNPM
Sbjct: 147 KLHDINAQMVEDQGFLDSLRDLIADSNPM 175
Score = 371 (135.7 bits), Expect = 2.4e-70, Sum P(3) = 2.4e-70
Identities = 72/79 (91%), Positives = 78/79 (98%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESFLEGFHDE+TQVQL LLTAIVKLFLK+P++TQELVQQVLSLATQD
Sbjct: 454 EYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQD 513
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRG+IYWRLLST
Sbjct: 514 SDNPDLRDRGYIYWRLLST 532
Score = 358 (131.1 bits), Expect = 4.4e-91, Sum P(3) = 4.4e-91
Identities = 86/198 (43%), Positives = 120/198 (60%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTT KKGEIFELK ELN++ IA+MTVGKDVS+LFPDVVNCMQT
Sbjct: 1 MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLFDLCS 116
DNLELKKLVYLYLMNYAKS PDMAIMA ++F + + + +R+ I + +
Sbjct: 61 DNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITE 120
Query: 117 SVGVFVKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTA 171
+ ++ C +D +P +R A+ V + I + + + LR + D +P V A
Sbjct: 121 YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANA 180
Query: 172 AVCVAKLYDI--NAQLVE 187
++++ + N+ L++
Sbjct: 181 VAALSEISESHPNSNLLD 198
Score = 341 (125.1 bits), Expect = 3.0e-27, P = 3.0e-27
Identities = 109/353 (30%), Positives = 176/353 (49%)
Query: 552 VKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTAAVCVA 606
++ C +D +P +R A+ V + I + + + LR + D +P V A ++
Sbjct: 126 LRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALS 185
Query: 607 KLYDI--NAQLVE-DQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQ 663
++ + N+ L++ + +++L L++ + LS N I +
Sbjct: 186 EISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSI---CE 242
Query: 664 TINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAA------VV 717
+ L+ N V +L PK+ + +++ P L + V
Sbjct: 243 RVTPRLSHANSAVVLSAVKVLMKFLELLPKESDYYNMLLKKLAPPLVTLLSGEPEVQYVA 302
Query: 718 LSAVKVLM-KLMEMLPGEGDFVSTLTKKLAPPL-VTLLSSEPEVQYVALRNINLIVQKRP 775
L + +++ K E+L E + K P+ V L + ++ + NI ++ +
Sbjct: 303 LRNINLIVQKRPEILKQE---IKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELK 359
Query: 776 DILKHEMKVFFVKYN----DPIYVKLEK-LDIMIRLASQANIAQVNYVVQEAIVVIKDIF 830
+ E+ V FV+ +K+E+ + + +VNYVVQEAIVVI+DIF
Sbjct: 360 EYAT-EVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIF 418
Query: 831 RKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFLE 883
RKYPNKYE+II+TLCENLD+LDEP+ARA+MIWI+GEYAERIDNADELLESFLE
Sbjct: 419 RKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLE 471
Score = 48 (22.0 bits), Expect = 6.4e-98, Sum P(3) = 6.4e-98
Identities = 28/123 (22%), Positives = 51/123 (41%)
Query: 748 PLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLA 807
PL TL P ++ L N+ + V+ D+ + N ++V+ K++ + LA
Sbjct: 801 PLNTL---GPVMKMEPLNNLQVAVKNNIDVFYFSC---LIPLN-VLFVEDGKMERQVFLA 853
Query: 808 SQANIAQVN---YVVQEAIVVIKDIFRKYPNK-YETIISTLCENLDTLDEPEARASMIWI 863
+ +I N + ++E + + K N TI E D L + + IWI
Sbjct: 854 TWKDIPNENELQFQIKECHLNADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWI 913
Query: 864 IGE 866
+ E
Sbjct: 914 LAE 916
>UNIPROTKB|G3X7G4 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9913 "Bos
taurus" [GO:0030117 "membrane coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 PIRSF:PIRSF002291 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192
GO:GO:0008565 PANTHER:PTHR11134 GeneTree:ENSGT00530000063138
OMA:YDISATM EMBL:DAAA02048460 Ensembl:ENSBTAT00000027078
Uniprot:G3X7G4
Length = 598
Score = 1416 (503.5 bits), Expect = 6.6e-145, P = 6.6e-145
Identities = 280/337 (83%), Positives = 308/337 (91%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIA+MTVGKDVS+LFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVN+FVKDCE
Sbjct: 37 VIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCE 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINAQ+V
Sbjct: 97 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMV 156
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
EDQGFLD L+DL++DSNPMVVANAVAALSE++E+ + L+++N Q INKLLTALNECT
Sbjct: 157 EDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNS-NLLDLNPQNINKLLTALNECT 215
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQ+FILD LSNY+PKDDREAQSICER+TPRL+HAN+AVVLSAVKVLMK +E+LP E D
Sbjct: 216 EWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKESD 275
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ + L KKLAPPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYNDPIYVK
Sbjct: 276 YYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVK 335
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
LEKLDIMIRLASQANIAQV ++E A V D RK
Sbjct: 336 LEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRK 372
Score = 597 (215.2 bits), Expect = 9.3e-101, Sum P(2) = 9.3e-101
Identities = 141/261 (54%), Positives = 170/261 (65%)
Query: 274 PGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYND 333
P E D+ + L KKLAPPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYND
Sbjct: 271 PKESDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYND 330
Query: 334 PIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 393
PIYVKLEKLDIMIRLASQANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER
Sbjct: 331 PIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 390
Query: 394 CVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQEL 453
CVSTLLDLIQTK + A ++ + ++ + L + L P D +
Sbjct: 391 CVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSL--DEP-DARAA 447
Query: 454 VQQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPD 513
+ ++ + DN D F+ +T L LT +V + + L
Sbjct: 448 MIWIVGEYAERIDNADELLESFLEG--FHDESTQVQLTLLTAIVKLFLKKPSETQELVQQ 505
Query: 514 VVNC--MQTDNLELKKLVYLY 532
V++ +DN +L+ Y+Y
Sbjct: 506 VLSLATQDSDNPDLRDRGYIY 526
Score = 423 (154.0 bits), Expect = 9.3e-101, Sum P(2) = 9.3e-101
Identities = 79/89 (88%), Positives = 85/89 (95%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 87 AVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 146
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KL+DINAQ+VEDQGFLD L+DL++DSNPM
Sbjct: 147 KLHDINAQMVEDQGFLDSLRDLIADSNPM 175
Score = 371 (135.7 bits), Expect = 1.9e-72, Sum P(2) = 1.9e-72
Identities = 72/79 (91%), Positives = 78/79 (98%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESFLEGFHDE+TQVQL LLTAIVKLFLK+P++TQELVQQVLSLATQD
Sbjct: 454 EYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQD 513
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRG+IYWRLLST
Sbjct: 514 SDNPDLRDRGYIYWRLLST 532
Score = 358 (131.1 bits), Expect = 6.7e-94, Sum P(2) = 6.7e-94
Identities = 86/198 (43%), Positives = 120/198 (60%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTT KKGEIFELK ELN++ IA+MTVGKDVS+LFPDVVNCMQT
Sbjct: 1 MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLFDLCS 116
DNLELKKLVYLYLMNYAKS PDMAIMA ++F + + + +R+ I + +
Sbjct: 61 DNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITE 120
Query: 117 SVGVFVKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTA 171
+ ++ C +D +P +R A+ V + I + + + LR + D +P V A
Sbjct: 121 YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANA 180
Query: 172 AVCVAKLYDI--NAQLVE 187
++++ + N+ L++
Sbjct: 181 VAALSEISESHPNSNLLD 198
Score = 341 (125.1 bits), Expect = 8.4e-28, P = 8.4e-28
Identities = 109/353 (30%), Positives = 176/353 (49%)
Query: 552 VKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTAAVCVA 606
++ C +D +P +R A+ V + I + + + LR + D +P V A ++
Sbjct: 126 LRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALS 185
Query: 607 KLYDI--NAQLVE-DQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQ 663
++ + N+ L++ + +++L L++ + LS N I +
Sbjct: 186 EISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSI---CE 242
Query: 664 TINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAA------VV 717
+ L+ N V +L PK+ + +++ P L + V
Sbjct: 243 RVTPRLSHANSAVVLSAVKVLMKFLELLPKESDYYNMLLKKLAPPLVTLLSGEPEVQYVA 302
Query: 718 LSAVKVLM-KLMEMLPGEGDFVSTLTKKLAPPL-VTLLSSEPEVQYVALRNINLIVQKRP 775
L + +++ K E+L E + K P+ V L + ++ + NI ++ +
Sbjct: 303 LRNINLIVQKRPEILKQE---IKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELK 359
Query: 776 DILKHEMKVFFVKYN----DPIYVKLEK-LDIMIRLASQANIAQVNYVVQEAIVVIKDIF 830
+ E+ V FV+ +K+E+ + + +VNYVVQEAIVVI+DIF
Sbjct: 360 EYAT-EVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIF 418
Query: 831 RKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFLE 883
RKYPNKYE+II+TLCENLD+LDEP+ARA+MIWI+GEYAERIDNADELLESFLE
Sbjct: 419 RKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLE 471
>UNIPROTKB|F1S182 [details] [associations]
symbol:LOC100517121 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR013037 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
PIRSF:PIRSF002291 SMART:SM00809 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 KO:K11825 GO:GO:0030131 Gene3D:2.60.40.1150
PANTHER:PTHR11134 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:YDISATM EMBL:CU927946 RefSeq:XP_003131766.3
Ensembl:ENSSSCT00000019278 GeneID:100517121 KEGG:ssc:100517121
Uniprot:F1S182
Length = 819
Score = 1415 (503.2 bits), Expect = 8.4e-145, P = 8.4e-145
Identities = 279/337 (82%), Positives = 308/337 (91%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIA+MTVGKDVS+LFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVN+FVKDCE
Sbjct: 37 VIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCE 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINAQ+V
Sbjct: 97 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMV 156
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
EDQGFLD L+DL++DSNPMVVANAVAALSE++E+ + L+++N Q INKLLTALNECT
Sbjct: 157 EDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNS-NLLDLNPQNINKLLTALNECT 215
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQ+FILD LSNY+PKDDREAQSICER+TPRL+HAN+AVVLSAVKVLMK +E+LP + D
Sbjct: 216 EWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPNDSD 275
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ + L KKLAPPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYNDPIYVK
Sbjct: 276 YYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVK 335
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
LEKLDIMIRLASQANIAQV ++E A V D RK
Sbjct: 336 LEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRK 372
Score = 596 (214.9 bits), Expect = 1.6e-98, Sum P(2) = 1.6e-98
Identities = 140/261 (53%), Positives = 170/261 (65%)
Query: 274 PGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYND 333
P + D+ + L KKLAPPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYND
Sbjct: 271 PNDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYND 330
Query: 334 PIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 393
PIYVKLEKLDIMIRLASQANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER
Sbjct: 331 PIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 390
Query: 394 CVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQEL 453
CVSTLLDLIQTK + A ++ + ++ + L + L P D +
Sbjct: 391 CVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSL--DEP-DARAA 447
Query: 454 VQQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPD 513
+ ++ + DN D F+ +T L LT +V + + L
Sbjct: 448 MIWIVGEYAERIDNADELLESFLEG--FHDESTQVQLTLLTAIVKLFLKKPSETQELVQQ 505
Query: 514 VVNC--MQTDNLELKKLVYLY 532
V++ +DN +L+ Y+Y
Sbjct: 506 VLSLATQDSDNPDLRDRGYIY 526
Score = 423 (154.0 bits), Expect = 1.6e-98, Sum P(2) = 1.6e-98
Identities = 79/89 (88%), Positives = 85/89 (95%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 87 AVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 146
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KL+DINAQ+VEDQGFLD L+DL++DSNPM
Sbjct: 147 KLHDINAQMVEDQGFLDSLRDLIADSNPM 175
Score = 371 (135.7 bits), Expect = 1.9e-70, Sum P(2) = 1.9e-70
Identities = 72/79 (91%), Positives = 78/79 (98%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESFLEGFHDE+TQVQL LLTAIVKLFLK+P++TQELVQQVLSLATQD
Sbjct: 454 EYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQD 513
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRG+IYWRLLST
Sbjct: 514 SDNPDLRDRGYIYWRLLST 532
Score = 358 (131.1 bits), Expect = 1.1e-91, Sum P(2) = 1.1e-91
Identities = 86/198 (43%), Positives = 120/198 (60%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTT KKGEIFELK ELN++ IA+MTVGKDVS+LFPDVVNCMQT
Sbjct: 1 MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLFDLCS 116
DNLELKKLVYLYLMNYAKS PDMAIMA ++F + + + +R+ I + +
Sbjct: 61 DNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITE 120
Query: 117 SVGVFVKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTA 171
+ ++ C +D +P +R A+ V + I + + + LR + D +P V A
Sbjct: 121 YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANA 180
Query: 172 AVCVAKLYDI--NAQLVE 187
++++ + N+ L++
Sbjct: 181 VAALSEISESHPNSNLLD 198
Score = 340 (124.7 bits), Expect = 2.9e-27, P = 2.9e-27
Identities = 109/353 (30%), Positives = 175/353 (49%)
Query: 552 VKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTAAVCVA 606
++ C +D +P +R A+ V + I + + + LR + D +P V A ++
Sbjct: 126 LRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALS 185
Query: 607 KLYDI--NAQLVE-DQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQ 663
++ + N+ L++ + +++L L++ + LS N I +
Sbjct: 186 EISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSI---CE 242
Query: 664 TINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAA------VV 717
+ L+ N V +L P D + +++ P L + V
Sbjct: 243 RVTPRLSHANSAVVLSAVKVLMKFLELLPNDSDYYNMLLKKLAPPLVTLLSGEPEVQYVA 302
Query: 718 LSAVKVLM-KLMEMLPGEGDFVSTLTKKLAPPL-VTLLSSEPEVQYVALRNINLIVQKRP 775
L + +++ K E+L E + K P+ V L + ++ + NI ++ +
Sbjct: 303 LRNINLIVQKRPEILKQE---IKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELK 359
Query: 776 DILKHEMKVFFVKYN----DPIYVKLEK-LDIMIRLASQANIAQVNYVVQEAIVVIKDIF 830
+ E+ V FV+ +K+E+ + + +VNYVVQEAIVVI+DIF
Sbjct: 360 EYAT-EVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIF 418
Query: 831 RKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFLE 883
RKYPNKYE+II+TLCENLD+LDEP+ARA+MIWI+GEYAERIDNADELLESFLE
Sbjct: 419 RKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLE 471
>UNIPROTKB|I3L6Y6 [details] [associations]
symbol:AP2B1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:DCHLNAD Ensembl:ENSSSCT00000025334 Uniprot:I3L6Y6
Length = 939
Score = 1415 (503.2 bits), Expect = 8.4e-145, P = 8.4e-145
Identities = 279/337 (82%), Positives = 308/337 (91%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIA+MTVGKDVS+LFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVN+FVKDCE
Sbjct: 25 VIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCE 84
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINAQ+V
Sbjct: 85 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMV 144
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
EDQGFLD L+DL++DSNPMVVANAVAALSE++E+ + L+++N Q INKLLTALNECT
Sbjct: 145 EDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNS-NLLDLNPQNINKLLTALNECT 203
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQ+FILD LSNY+PKDDREAQSICER+TPRL+HAN+AVVLSAVKVLMK +E+LP + D
Sbjct: 204 EWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPNDSD 263
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ + L KKLAPPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYNDPIYVK
Sbjct: 264 YYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVK 323
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
LEKLDIMIRLASQANIAQV ++E A V D RK
Sbjct: 324 LEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRK 360
Score = 596 (214.9 bits), Expect = 7.7e-98, Sum P(3) = 7.7e-98
Identities = 140/261 (53%), Positives = 170/261 (65%)
Query: 274 PGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYND 333
P + D+ + L KKLAPPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYND
Sbjct: 259 PNDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYND 318
Query: 334 PIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 393
PIYVKLEKLDIMIRLASQANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER
Sbjct: 319 PIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 378
Query: 394 CVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQEL 453
CVSTLLDLIQTK + A ++ + ++ + L + L P D +
Sbjct: 379 CVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSL--DEP-DARAA 435
Query: 454 VQQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPD 513
+ ++ + DN D F+ +T L LT +V + + L
Sbjct: 436 MIWIVGEYAERIDNADELLESFLEG--FHDESTQVQLTLLTAIVKLFLKKPSETQELVQQ 493
Query: 514 VVNC--MQTDNLELKKLVYLY 532
V++ +DN +L+ Y+Y
Sbjct: 494 VLSLATQDSDNPDLRDRGYIY 514
Score = 423 (154.0 bits), Expect = 7.7e-98, Sum P(3) = 7.7e-98
Identities = 79/89 (88%), Positives = 85/89 (95%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 75 AVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 134
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KL+DINAQ+VEDQGFLD L+DL++DSNPM
Sbjct: 135 KLHDINAQMVEDQGFLDSLRDLIADSNPM 163
Score = 371 (135.7 bits), Expect = 2.2e-70, Sum P(3) = 2.2e-70
Identities = 72/79 (91%), Positives = 78/79 (98%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESFLEGFHDE+TQVQL LLTAIVKLFLK+P++TQELVQQVLSLATQD
Sbjct: 442 EYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQD 501
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRG+IYWRLLST
Sbjct: 502 SDNPDLRDRGYIYWRLLST 520
Score = 340 (124.7 bits), Expect = 3.8e-27, P = 3.8e-27
Identities = 109/353 (30%), Positives = 175/353 (49%)
Query: 552 VKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTAAVCVA 606
++ C +D +P +R A+ V + I + + + LR + D +P V A ++
Sbjct: 114 LRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALS 173
Query: 607 KLYDI--NAQLVE-DQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQ 663
++ + N+ L++ + +++L L++ + LS N I +
Sbjct: 174 EISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSI---CE 230
Query: 664 TINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAA------VV 717
+ L+ N V +L P D + +++ P L + V
Sbjct: 231 RVTPRLSHANSAVVLSAVKVLMKFLELLPNDSDYYNMLLKKLAPPLVTLLSGEPEVQYVA 290
Query: 718 LSAVKVLM-KLMEMLPGEGDFVSTLTKKLAPPL-VTLLSSEPEVQYVALRNINLIVQKRP 775
L + +++ K E+L E + K P+ V L + ++ + NI ++ +
Sbjct: 291 LRNINLIVQKRPEILKQE---IKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELK 347
Query: 776 DILKHEMKVFFVKYN----DPIYVKLEK-LDIMIRLASQANIAQVNYVVQEAIVVIKDIF 830
+ E+ V FV+ +K+E+ + + +VNYVVQEAIVVI+DIF
Sbjct: 348 EYAT-EVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIF 406
Query: 831 RKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFLE 883
RKYPNKYE+II+TLCENLD+LDEP+ARA+MIWI+GEYAERIDNADELLESFLE
Sbjct: 407 RKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLE 459
Score = 300 (110.7 bits), Expect = 6.4e-85, Sum P(3) = 6.4e-85
Identities = 75/186 (40%), Positives = 109/186 (58%)
Query: 13 GEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLY 72
GEIFELK ELN++ IA+MTVGKDVS+LFPDVVNCMQTDNLELKKLVYLY
Sbjct: 1 GEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLY 60
Query: 73 LMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLFDLCSSVGVFVKDC-ED 127
LMNYAKS PDMAIMA ++F + + + +R+ I + + + ++ C +D
Sbjct: 61 LMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKD 120
Query: 128 SNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTAAVCVAKLYDI-- 181
+P +R A+ V + I + + + LR + D +P V A ++++ +
Sbjct: 121 EDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHP 180
Query: 182 NAQLVE 187
N+ L++
Sbjct: 181 NSNLLD 186
Score = 48 (22.0 bits), Expect = 7.7e-98, Sum P(3) = 7.7e-98
Identities = 28/123 (22%), Positives = 51/123 (41%)
Query: 748 PLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLA 807
PL TL P ++ L N+ + V+ D+ + N ++V+ K++ + LA
Sbjct: 789 PLNTL---GPVMKMEPLNNLQVAVKNNIDVFYFSC---LIPLN-VLFVEDGKMERQVFLA 841
Query: 808 SQANIAQVN---YVVQEAIVVIKDIFRKYPNK-YETIISTLCENLDTLDEPEARASMIWI 863
+ +I N + ++E + + K N TI E D L + + IWI
Sbjct: 842 TWKDIPNENELQFQIKECHLNADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWI 901
Query: 864 IGE 866
+ E
Sbjct: 902 LAE 904
>UNIPROTKB|E2RIV1 [details] [associations]
symbol:AP2B1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 CTD:163 KO:K11825 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:DCHLNAD EMBL:AAEX03006623 RefSeq:XP_853723.1
ProteinModelPortal:E2RIV1 Ensembl:ENSCAFT00000028998 GeneID:480605
KEGG:cfa:480605 Uniprot:E2RIV1
Length = 951
Score = 1413 (502.5 bits), Expect = 1.4e-144, P = 1.4e-144
Identities = 279/337 (82%), Positives = 308/337 (91%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIA+MTVGKDVS+LFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVN+FVKDCE
Sbjct: 37 VIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCE 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINAQ+V
Sbjct: 97 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMV 156
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
EDQGFLD L+DL++DSNPMVVANAVAALSE++E+ + L+++N Q INKLLTALNECT
Sbjct: 157 EDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNS-NLLDLNPQNINKLLTALNECT 215
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQ+FILD LSNY+PKDDREAQSICER+TPRL+HAN+AVVLSAVKVLMK +E+LP + D
Sbjct: 216 EWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSD 275
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ + L KKLAPPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYNDPIYVK
Sbjct: 276 YYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVK 335
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
LEKLDIMIRLASQANIAQV ++E A V D RK
Sbjct: 336 LEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRK 372
Score = 594 (214.2 bits), Expect = 2.0e-97, Sum P(3) = 2.0e-97
Identities = 140/261 (53%), Positives = 170/261 (65%)
Query: 274 PGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYND 333
P + D+ + L KKLAPPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYND
Sbjct: 271 PKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYND 330
Query: 334 PIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 393
PIYVKLEKLDIMIRLASQANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER
Sbjct: 331 PIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 390
Query: 394 CVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQEL 453
CVSTLLDLIQTK + A ++ + ++ + L + L P D +
Sbjct: 391 CVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSL--DEP-DARAA 447
Query: 454 VQQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPD 513
+ ++ + DN D F+ +T L LT +V + + L
Sbjct: 448 MIWIVGEYAERIDNADELLESFLEG--FHDESTQVQLTLLTAIVKLFLKKPSETQELVQQ 505
Query: 514 VVNC--MQTDNLELKKLVYLY 532
V++ +DN +L+ Y+Y
Sbjct: 506 VLSLATQDSDNPDLRDRGYIY 526
Score = 423 (154.0 bits), Expect = 2.0e-97, Sum P(3) = 2.0e-97
Identities = 79/89 (88%), Positives = 85/89 (95%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 87 AVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 146
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KL+DINAQ+VEDQGFLD L+DL++DSNPM
Sbjct: 147 KLHDINAQMVEDQGFLDSLRDLIADSNPM 175
Score = 371 (135.7 bits), Expect = 2.4e-70, Sum P(3) = 2.4e-70
Identities = 72/79 (91%), Positives = 78/79 (98%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESFLEGFHDE+TQVQL LLTAIVKLFLK+P++TQELVQQVLSLATQD
Sbjct: 454 EYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQD 513
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRG+IYWRLLST
Sbjct: 514 SDNPDLRDRGYIYWRLLST 532
Score = 358 (131.1 bits), Expect = 1.3e-90, Sum P(3) = 1.3e-90
Identities = 86/198 (43%), Positives = 120/198 (60%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTT KKGEIFELK ELN++ IA+MTVGKDVS+LFPDVVNCMQT
Sbjct: 1 MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLFDLCS 116
DNLELKKLVYLYLMNYAKS PDMAIMA ++F + + + +R+ I + +
Sbjct: 61 DNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITE 120
Query: 117 SVGVFVKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTA 171
+ ++ C +D +P +R A+ V + I + + + LR + D +P V A
Sbjct: 121 YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANA 180
Query: 172 AVCVAKLYDI--NAQLVE 187
++++ + N+ L++
Sbjct: 181 VAALSEISESHPNSNLLD 198
Score = 345 (126.5 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 110/353 (31%), Positives = 176/353 (49%)
Query: 552 VKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTAAVCVA 606
++ C +D +P +R A+ V + I + + + LR + D +P V A ++
Sbjct: 126 LRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALS 185
Query: 607 KLYDI--NAQLVE-DQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQ 663
++ + N+ L++ + +++L L++ + LS N I +
Sbjct: 186 EISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSI---CE 242
Query: 664 TINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAA------VV 717
+ L+ N V +L PKD + +++ P L + V
Sbjct: 243 RVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVA 302
Query: 718 LSAVKVLM-KLMEMLPGEGDFVSTLTKKLAPPL-VTLLSSEPEVQYVALRNINLIVQKRP 775
L + +++ K E+L E + K P+ V L + ++ + NI ++ +
Sbjct: 303 LRNINLIVQKRPEILKQE---IKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELK 359
Query: 776 DILKHEMKVFFVKYN----DPIYVKLEK-LDIMIRLASQANIAQVNYVVQEAIVVIKDIF 830
+ E+ V FV+ +K+E+ + + +VNYVVQEAIVVI+DIF
Sbjct: 360 EYAT-EVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIF 418
Query: 831 RKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFLE 883
RKYPNKYE+II+TLCENLD+LDEP+ARA+MIWI+GEYAERIDNADELLESFLE
Sbjct: 419 RKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLE 471
Score = 48 (22.0 bits), Expect = 2.0e-97, Sum P(3) = 2.0e-97
Identities = 28/123 (22%), Positives = 51/123 (41%)
Query: 748 PLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLA 807
PL TL P ++ L N+ + V+ D+ + N ++V+ K++ + LA
Sbjct: 801 PLNTL---GPVMKMEPLNNLQVAVKNNIDVFYFSC---LIPLN-VLFVEDGKMERQVFLA 853
Query: 808 SQANIAQVN---YVVQEAIVVIKDIFRKYPNK-YETIISTLCENLDTLDEPEARASMIWI 863
+ +I N + ++E + + K N TI E D L + + IWI
Sbjct: 854 TWKDIPNENELQFQIKECHLNADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWI 913
Query: 864 IGE 866
+ E
Sbjct: 914 LAE 916
>UNIPROTKB|P63010 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0048268 "clathrin coat
assembly" evidence=IEA] [GO:0005905 "coated pit" evidence=IEA]
[GO:0030276 "clathrin binding" evidence=IPI] [GO:0005829 "cytosol"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007173 "epidermal growth factor receptor signaling pathway"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0007411 "axon guidance" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0019886 "antigen processing and
presentation of exogenous peptide antigen via MHC class II"
evidence=TAS] [GO:0030666 "endocytic vesicle membrane"
evidence=TAS] [GO:0030669 "clathrin-coated endocytic vesicle
membrane" evidence=TAS] [GO:0042059 "negative regulation of
epidermal growth factor receptor signaling pathway" evidence=TAS]
[GO:0048011 "neurotrophin TRK receptor signaling pathway"
evidence=TAS] [GO:0050690 "regulation of defense response to virus
by virus" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_13685 InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF02883 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM00809 SMART:SM01020 InterPro:IPR013041 EMBL:M34175
GO:GO:0005829 GO:GO:0005886 Reactome:REACT_111045
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0007411 GO:GO:0007173 GO:GO:0048011 GO:GO:0006886
GO:GO:0050690 GO:GO:0016032 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030669 GO:GO:0019886 GO:GO:0008565
GO:GO:0007268 GO:GO:0005905 GO:GO:0005802 GO:GO:0048488
GO:GO:0007269 GO:GO:0048268 CTD:163 eggNOG:COG5096
HOGENOM:HOG000163270 HOVERGEN:HBG050515 KO:K11825 OrthoDB:EOG4PG607
GO:GO:0030131 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 GO:GO:0042059 PDB:2JKR PDB:2JKT PDBsum:2JKR
PDBsum:2JKT PDB:2VGL PDB:2XA7 PDBsum:2VGL PDBsum:2XA7 EMBL:AC006237
EMBL:CH471147 EMBL:BC006201 IPI:IPI00784156 IPI:IPI00784366
PIR:A35553 RefSeq:NP_001025177.1 RefSeq:NP_001273.1
UniGene:Hs.514819 PDB:1E42 PDB:2G30 PDB:2IV8 PDB:2IV9 PDBsum:1E42
PDBsum:2G30 PDBsum:2IV8 PDBsum:2IV9 ProteinModelPortal:P63010
SMR:P63010 DIP:DIP-33098N IntAct:P63010 MINT:MINT-256705
STRING:P63010 PhosphoSite:P63010 DMDM:51702211 PaxDb:P63010
PRIDE:P63010 DNASU:163 Ensembl:ENST00000262325
Ensembl:ENST00000312678 Ensembl:ENST00000537622 GeneID:163
KEGG:hsa:163 UCSC:uc002hjq.3 UCSC:uc002hjr.3 GeneCards:GC17P033914
HGNC:HGNC:563 HPA:CAB017631 MIM:601025 neXtProt:NX_P63010
PharmGKB:PA24854 OMA:DCHLNAD ChiTaRS:AP2B1 EvolutionaryTrace:P63010
GenomeRNAi:163 NextBio:653 ArrayExpress:P63010 Bgee:P63010
CleanEx:HS_AP2B1 Genevestigator:P63010 GermOnline:ENSG00000006125
Uniprot:P63010
Length = 937
Score = 1413 (502.5 bits), Expect = 1.4e-144, P = 1.4e-144
Identities = 279/337 (82%), Positives = 308/337 (91%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIA+MTVGKDVS+LFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVN+FVKDCE
Sbjct: 37 VIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCE 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINAQ+V
Sbjct: 97 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMV 156
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
EDQGFLD L+DL++DSNPMVVANAVAALSE++E+ + L+++N Q INKLLTALNECT
Sbjct: 157 EDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNS-NLLDLNPQNINKLLTALNECT 215
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQ+FILD LSNY+PKDDREAQSICER+TPRL+HAN+AVVLSAVKVLMK +E+LP + D
Sbjct: 216 EWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSD 275
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ + L KKLAPPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYNDPIYVK
Sbjct: 276 YYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVK 335
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
LEKLDIMIRLASQANIAQV ++E A V D RK
Sbjct: 336 LEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRK 372
Score = 594 (214.2 bits), Expect = 1.5e-97, Sum P(3) = 1.5e-97
Identities = 140/261 (53%), Positives = 170/261 (65%)
Query: 274 PGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYND 333
P + D+ + L KKLAPPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYND
Sbjct: 271 PKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYND 330
Query: 334 PIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 393
PIYVKLEKLDIMIRLASQANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER
Sbjct: 331 PIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 390
Query: 394 CVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQEL 453
CVSTLLDLIQTK + A ++ + ++ + L + L P D +
Sbjct: 391 CVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSL--DEP-DARAA 447
Query: 454 VQQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPD 513
+ ++ + DN D F+ +T L LT +V + + L
Sbjct: 448 MIWIVGEYAERIDNADELLESFLEG--FHDESTQVQLTLLTAIVKLFLKKPSETQELVQQ 505
Query: 514 VVNC--MQTDNLELKKLVYLY 532
V++ +DN +L+ Y+Y
Sbjct: 506 VLSLATQDSDNPDLRDRGYIY 526
Score = 423 (154.0 bits), Expect = 1.5e-97, Sum P(3) = 1.5e-97
Identities = 79/89 (88%), Positives = 85/89 (95%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 87 AVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 146
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KL+DINAQ+VEDQGFLD L+DL++DSNPM
Sbjct: 147 KLHDINAQMVEDQGFLDSLRDLIADSNPM 175
Score = 371 (135.7 bits), Expect = 2.2e-70, Sum P(3) = 2.2e-70
Identities = 72/79 (91%), Positives = 78/79 (98%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESFLEGFHDE+TQVQL LLTAIVKLFLK+P++TQELVQQVLSLATQD
Sbjct: 454 EYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQD 513
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRG+IYWRLLST
Sbjct: 514 SDNPDLRDRGYIYWRLLST 532
Score = 358 (131.1 bits), Expect = 9.8e-91, Sum P(3) = 9.8e-91
Identities = 86/198 (43%), Positives = 120/198 (60%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTT KKGEIFELK ELN++ IA+MTVGKDVS+LFPDVVNCMQT
Sbjct: 1 MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLFDLCS 116
DNLELKKLVYLYLMNYAKS PDMAIMA ++F + + + +R+ I + +
Sbjct: 61 DNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITE 120
Query: 117 SVGVFVKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTA 171
+ ++ C +D +P +R A+ V + I + + + LR + D +P V A
Sbjct: 121 YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANA 180
Query: 172 AVCVAKLYDI--NAQLVE 187
++++ + N+ L++
Sbjct: 181 VAALSEISESHPNSNLLD 198
Score = 345 (126.5 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 110/353 (31%), Positives = 176/353 (49%)
Query: 552 VKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTAAVCVA 606
++ C +D +P +R A+ V + I + + + LR + D +P V A ++
Sbjct: 126 LRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALS 185
Query: 607 KLYDI--NAQLVE-DQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQ 663
++ + N+ L++ + +++L L++ + LS N I +
Sbjct: 186 EISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSI---CE 242
Query: 664 TINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAA------VV 717
+ L+ N V +L PKD + +++ P L + V
Sbjct: 243 RVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVA 302
Query: 718 LSAVKVLM-KLMEMLPGEGDFVSTLTKKLAPPL-VTLLSSEPEVQYVALRNINLIVQKRP 775
L + +++ K E+L E + K P+ V L + ++ + NI ++ +
Sbjct: 303 LRNINLIVQKRPEILKQE---IKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELK 359
Query: 776 DILKHEMKVFFVKYN----DPIYVKLEK-LDIMIRLASQANIAQVNYVVQEAIVVIKDIF 830
+ E+ V FV+ +K+E+ + + +VNYVVQEAIVVI+DIF
Sbjct: 360 EYAT-EVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIF 418
Query: 831 RKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFLE 883
RKYPNKYE+II+TLCENLD+LDEP+ARA+MIWI+GEYAERIDNADELLESFLE
Sbjct: 419 RKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLE 471
Score = 48 (22.0 bits), Expect = 1.5e-97, Sum P(3) = 1.5e-97
Identities = 28/123 (22%), Positives = 51/123 (41%)
Query: 748 PLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLA 807
PL TL P ++ L N+ + V+ D+ + N ++V+ K++ + LA
Sbjct: 787 PLNTL---GPVMKMEPLNNLQVAVKNNIDVFYFSC---LIPLN-VLFVEDGKMERQVFLA 839
Query: 808 SQANIAQVN---YVVQEAIVVIKDIFRKYPNK-YETIISTLCENLDTLDEPEARASMIWI 863
+ +I N + ++E + + K N TI E D L + + IWI
Sbjct: 840 TWKDIPNENELQFQIKECHLNADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWI 899
Query: 864 IGE 866
+ E
Sbjct: 900 LAE 902
>MGI|MGI:1919020 [details] [associations]
symbol:Ap2b1 "adaptor-related protein complex 2, beta 1
subunit" species:10090 "Mus musculus" [GO:0005802 "trans-Golgi
network" evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005905 "coated pit" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0030118 "clathrin coat" evidence=ISO] [GO:0030131 "clathrin
adaptor complex" evidence=ISO] [GO:0030276 "clathrin binding"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0048268 "clathrin coat assembly" evidence=ISO]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 MGI:MGI:1919020 GO:GO:0005886 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
GO:GO:0005905 GO:GO:0005802 GO:GO:0048488 GO:GO:0007269
GO:GO:0048268 CTD:163 eggNOG:COG5096 HOGENOM:HOG000163270
HOVERGEN:HBG050515 KO:K11825 OrthoDB:EOG4PG607 GO:GO:0030131
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348
GeneTree:ENSGT00530000063138 OMA:DCHLNAD ChiTaRS:AP2B1
EMBL:AK004975 EMBL:BC046772 IPI:IPI00119689 IPI:IPI00378063
RefSeq:NP_001030931.1 RefSeq:NP_082191.1 UniGene:Mm.39053
ProteinModelPortal:Q9DBG3 SMR:Q9DBG3 IntAct:Q9DBG3
MINT:MINT-1870047 STRING:Q9DBG3 PhosphoSite:Q9DBG3 PaxDb:Q9DBG3
PRIDE:Q9DBG3 Ensembl:ENSMUST00000018875 Ensembl:ENSMUST00000065692
GeneID:71770 KEGG:mmu:71770 UCSC:uc007kou.1 NextBio:334467
Bgee:Q9DBG3 CleanEx:MM_AP2B1 Genevestigator:Q9DBG3
GermOnline:ENSMUSG00000035152 Uniprot:Q9DBG3
Length = 937
Score = 1413 (502.5 bits), Expect = 1.4e-144, P = 1.4e-144
Identities = 279/337 (82%), Positives = 308/337 (91%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIA+MTVGKDVS+LFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVN+FVKDCE
Sbjct: 37 VIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCE 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINAQ+V
Sbjct: 97 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMV 156
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
EDQGFLD L+DL++DSNPMVVANAVAALSE++E+ + L+++N Q INKLLTALNECT
Sbjct: 157 EDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNS-NLLDLNPQNINKLLTALNECT 215
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQ+FILD LSNY+PKDDREAQSICER+TPRL+HAN+AVVLSAVKVLMK +E+LP + D
Sbjct: 216 EWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSD 275
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ + L KKLAPPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYNDPIYVK
Sbjct: 276 YYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVK 335
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
LEKLDIMIRLASQANIAQV ++E A V D RK
Sbjct: 336 LEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRK 372
Score = 594 (214.2 bits), Expect = 1.5e-97, Sum P(3) = 1.5e-97
Identities = 140/261 (53%), Positives = 170/261 (65%)
Query: 274 PGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYND 333
P + D+ + L KKLAPPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYND
Sbjct: 271 PKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYND 330
Query: 334 PIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 393
PIYVKLEKLDIMIRLASQANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER
Sbjct: 331 PIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 390
Query: 394 CVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQEL 453
CVSTLLDLIQTK + A ++ + ++ + L + L P D +
Sbjct: 391 CVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSL--DEP-DARAA 447
Query: 454 VQQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPD 513
+ ++ + DN D F+ +T L LT +V + + L
Sbjct: 448 MIWIVGEYAERIDNADELLESFLEG--FHDESTQVQLTLLTAIVKLFLKKPSETQELVQQ 505
Query: 514 VVNC--MQTDNLELKKLVYLY 532
V++ +DN +L+ Y+Y
Sbjct: 506 VLSLATQDSDNPDLRDRGYIY 526
Score = 423 (154.0 bits), Expect = 1.5e-97, Sum P(3) = 1.5e-97
Identities = 79/89 (88%), Positives = 85/89 (95%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 87 AVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 146
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KL+DINAQ+VEDQGFLD L+DL++DSNPM
Sbjct: 147 KLHDINAQMVEDQGFLDSLRDLIADSNPM 175
Score = 371 (135.7 bits), Expect = 2.2e-70, Sum P(3) = 2.2e-70
Identities = 72/79 (91%), Positives = 78/79 (98%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESFLEGFHDE+TQVQL LLTAIVKLFLK+P++TQELVQQVLSLATQD
Sbjct: 454 EYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQD 513
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRG+IYWRLLST
Sbjct: 514 SDNPDLRDRGYIYWRLLST 532
Score = 358 (131.1 bits), Expect = 9.8e-91, Sum P(3) = 9.8e-91
Identities = 86/198 (43%), Positives = 120/198 (60%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTT KKGEIFELK ELN++ IA+MTVGKDVS+LFPDVVNCMQT
Sbjct: 1 MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLFDLCS 116
DNLELKKLVYLYLMNYAKS PDMAIMA ++F + + + +R+ I + +
Sbjct: 61 DNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITE 120
Query: 117 SVGVFVKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTA 171
+ ++ C +D +P +R A+ V + I + + + LR + D +P V A
Sbjct: 121 YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANA 180
Query: 172 AVCVAKLYDI--NAQLVE 187
++++ + N+ L++
Sbjct: 181 VAALSEISESHPNSNLLD 198
Score = 345 (126.5 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 110/353 (31%), Positives = 176/353 (49%)
Query: 552 VKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTAAVCVA 606
++ C +D +P +R A+ V + I + + + LR + D +P V A ++
Sbjct: 126 LRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALS 185
Query: 607 KLYDI--NAQLVE-DQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQ 663
++ + N+ L++ + +++L L++ + LS N I +
Sbjct: 186 EISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSI---CE 242
Query: 664 TINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAA------VV 717
+ L+ N V +L PKD + +++ P L + V
Sbjct: 243 RVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVA 302
Query: 718 LSAVKVLM-KLMEMLPGEGDFVSTLTKKLAPPL-VTLLSSEPEVQYVALRNINLIVQKRP 775
L + +++ K E+L E + K P+ V L + ++ + NI ++ +
Sbjct: 303 LRNINLIVQKRPEILKQE---IKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELK 359
Query: 776 DILKHEMKVFFVKYN----DPIYVKLEK-LDIMIRLASQANIAQVNYVVQEAIVVIKDIF 830
+ E+ V FV+ +K+E+ + + +VNYVVQEAIVVI+DIF
Sbjct: 360 EYAT-EVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIF 418
Query: 831 RKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFLE 883
RKYPNKYE+II+TLCENLD+LDEP+ARA+MIWI+GEYAERIDNADELLESFLE
Sbjct: 419 RKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLE 471
Score = 48 (22.0 bits), Expect = 1.5e-97, Sum P(3) = 1.5e-97
Identities = 28/123 (22%), Positives = 51/123 (41%)
Query: 748 PLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLA 807
PL TL P ++ L N+ + V+ D+ + N ++V+ K++ + LA
Sbjct: 787 PLNTL---GPVMKMEPLNNLQVAVKNNIDVFYFSC---LIPLN-VLFVEDGKMERQVFLA 839
Query: 808 SQANIAQVN---YVVQEAIVVIKDIFRKYPNK-YETIISTLCENLDTLDEPEARASMIWI 863
+ +I N + ++E + + K N TI E D L + + IWI
Sbjct: 840 TWKDIPNENELQFQIKECHLNADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWI 899
Query: 864 IGE 866
+ E
Sbjct: 900 LAE 902
>RGD|71048 [details] [associations]
symbol:Ap2b1 "adaptor-related protein complex 2, beta 1 subunit"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005802 "trans-Golgi network" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005905 "coated pit"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030118 "clathrin coat" evidence=IDA] [GO:0030119
"AP-type membrane coat adaptor complex" evidence=TAS] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0030276 "clathrin
binding" evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=IMP;IPI] [GO:0048268 "clathrin coat assembly" evidence=IDA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 RGD:71048 GO:GO:0005886 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0032403
GO:GO:0008565 GO:GO:0005905 GO:GO:0005802 GO:GO:0030276
GO:GO:0030118 GO:GO:0048268 CTD:163 eggNOG:COG5096
HOGENOM:HOG000163270 HOVERGEN:HBG050515 KO:K11825 GO:GO:0030131
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348
GeneTree:ENSGT00530000063138 GO:GO:0030119 OMA:DCHLNAD EMBL:M34176
EMBL:M77246 IPI:IPI00231502 IPI:IPI00389753 PIR:C35553
RefSeq:NP_542150.1 RefSeq:XP_003750923.1 UniGene:Rn.56138 PDB:3H1Z
PDB:3HS9 PDBsum:3H1Z PDBsum:3HS9 ProteinModelPortal:P62944
SMR:P62944 MINT:MINT-122517 STRING:P62944 PhosphoSite:P62944
PRIDE:P62944 Ensembl:ENSRNOT00000013363 Ensembl:ENSRNOT00000013629
GeneID:100912146 GeneID:140670 KEGG:rno:100912146 KEGG:rno:140670
EvolutionaryTrace:P62944 NextBio:620655 ArrayExpress:P62944
Genevestigator:P62944 GermOnline:ENSRNOG00000009988 Uniprot:P62944
Length = 937
Score = 1413 (502.5 bits), Expect = 1.4e-144, P = 1.4e-144
Identities = 279/337 (82%), Positives = 308/337 (91%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIA+MTVGKDVS+LFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVN+FVKDCE
Sbjct: 37 VIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCE 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINAQ+V
Sbjct: 97 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMV 156
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
EDQGFLD L+DL++DSNPMVVANAVAALSE++E+ + L+++N Q INKLLTALNECT
Sbjct: 157 EDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNS-NLLDLNPQNINKLLTALNECT 215
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQ+FILD LSNY+PKDDREAQSICER+TPRL+HAN+AVVLSAVKVLMK +E+LP + D
Sbjct: 216 EWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSD 275
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ + L KKLAPPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYNDPIYVK
Sbjct: 276 YYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVK 335
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
LEKLDIMIRLASQANIAQV ++E A V D RK
Sbjct: 336 LEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRK 372
Score = 594 (214.2 bits), Expect = 1.5e-97, Sum P(3) = 1.5e-97
Identities = 140/261 (53%), Positives = 170/261 (65%)
Query: 274 PGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYND 333
P + D+ + L KKLAPPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYND
Sbjct: 271 PKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYND 330
Query: 334 PIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 393
PIYVKLEKLDIMIRLASQANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER
Sbjct: 331 PIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 390
Query: 394 CVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQEL 453
CVSTLLDLIQTK + A ++ + ++ + L + L P D +
Sbjct: 391 CVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSL--DEP-DARAA 447
Query: 454 VQQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPD 513
+ ++ + DN D F+ +T L LT +V + + L
Sbjct: 448 MIWIVGEYAERIDNADELLESFLEG--FHDESTQVQLTLLTAIVKLFLKKPSETQELVQQ 505
Query: 514 VVNC--MQTDNLELKKLVYLY 532
V++ +DN +L+ Y+Y
Sbjct: 506 VLSLATQDSDNPDLRDRGYIY 526
Score = 423 (154.0 bits), Expect = 1.5e-97, Sum P(3) = 1.5e-97
Identities = 79/89 (88%), Positives = 85/89 (95%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 87 AVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 146
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KL+DINAQ+VEDQGFLD L+DL++DSNPM
Sbjct: 147 KLHDINAQMVEDQGFLDSLRDLIADSNPM 175
Score = 371 (135.7 bits), Expect = 2.2e-70, Sum P(3) = 2.2e-70
Identities = 72/79 (91%), Positives = 78/79 (98%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESFLEGFHDE+TQVQL LLTAIVKLFLK+P++TQELVQQVLSLATQD
Sbjct: 454 EYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQD 513
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRG+IYWRLLST
Sbjct: 514 SDNPDLRDRGYIYWRLLST 532
Score = 358 (131.1 bits), Expect = 9.8e-91, Sum P(3) = 9.8e-91
Identities = 86/198 (43%), Positives = 120/198 (60%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTT KKGEIFELK ELN++ IA+MTVGKDVS+LFPDVVNCMQT
Sbjct: 1 MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLFDLCS 116
DNLELKKLVYLYLMNYAKS PDMAIMA ++F + + + +R+ I + +
Sbjct: 61 DNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITE 120
Query: 117 SVGVFVKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTA 171
+ ++ C +D +P +R A+ V + I + + + LR + D +P V A
Sbjct: 121 YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANA 180
Query: 172 AVCVAKLYDI--NAQLVE 187
++++ + N+ L++
Sbjct: 181 VAALSEISESHPNSNLLD 198
Score = 345 (126.5 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 110/353 (31%), Positives = 176/353 (49%)
Query: 552 VKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTAAVCVA 606
++ C +D +P +R A+ V + I + + + LR + D +P V A ++
Sbjct: 126 LRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALS 185
Query: 607 KLYDI--NAQLVE-DQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQ 663
++ + N+ L++ + +++L L++ + LS N I +
Sbjct: 186 EISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSI---CE 242
Query: 664 TINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAA------VV 717
+ L+ N V +L PKD + +++ P L + V
Sbjct: 243 RVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVA 302
Query: 718 LSAVKVLM-KLMEMLPGEGDFVSTLTKKLAPPL-VTLLSSEPEVQYVALRNINLIVQKRP 775
L + +++ K E+L E + K P+ V L + ++ + NI ++ +
Sbjct: 303 LRNINLIVQKRPEILKQE---IKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELK 359
Query: 776 DILKHEMKVFFVKYN----DPIYVKLEK-LDIMIRLASQANIAQVNYVVQEAIVVIKDIF 830
+ E+ V FV+ +K+E+ + + +VNYVVQEAIVVI+DIF
Sbjct: 360 EYAT-EVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIF 418
Query: 831 RKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFLE 883
RKYPNKYE+II+TLCENLD+LDEP+ARA+MIWI+GEYAERIDNADELLESFLE
Sbjct: 419 RKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLE 471
Score = 48 (22.0 bits), Expect = 1.5e-97, Sum P(3) = 1.5e-97
Identities = 28/123 (22%), Positives = 51/123 (41%)
Query: 748 PLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLA 807
PL TL P ++ L N+ + V+ D+ + N ++V+ K++ + LA
Sbjct: 787 PLNTL---GPVMKMEPLNNLQVAVKNNIDVFYFSC---LIPLN-VLFVEDGKMERQVFLA 839
Query: 808 SQANIAQVN---YVVQEAIVVIKDIFRKYPNK-YETIISTLCENLDTLDEPEARASMIWI 863
+ +I N + ++E + + K N TI E D L + + IWI
Sbjct: 840 TWKDIPNENELQFQIKECHLNADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWI 899
Query: 864 IGE 866
+ E
Sbjct: 900 LAE 902
>UNIPROTKB|E1BXC1 [details] [associations]
symbol:AP2B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
EMBL:AADN02025947 EMBL:AADN02025948 EMBL:AADN02025949
IPI:IPI00821954 Ensembl:ENSGALT00000040164 ArrayExpress:E1BXC1
Uniprot:E1BXC1
Length = 938
Score = 1413 (502.5 bits), Expect = 1.4e-144, P = 1.4e-144
Identities = 279/337 (82%), Positives = 308/337 (91%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIA+MTVGKDVS+LFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVN+FVKDCE
Sbjct: 37 VIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCE 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINAQ+V
Sbjct: 97 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMV 156
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
EDQGFLD L+DL++DSNPMVVANAVAALSE++E+ + L+++N Q INKLLTALNECT
Sbjct: 157 EDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNS-NLLDLNPQNINKLLTALNECT 215
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQ+FILD LSNY+PKDDREAQSICER+TPRL+HAN+AVVLSAVKVLMK +E+LP + D
Sbjct: 216 EWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSD 275
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ + L KKLAPPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYNDPIYVK
Sbjct: 276 YYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVK 335
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
LEKLDIMIRLASQANIAQV ++E A V D RK
Sbjct: 336 LEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRK 372
Score = 594 (214.2 bits), Expect = 5.0e-97, Sum P(3) = 5.0e-97
Identities = 140/261 (53%), Positives = 170/261 (65%)
Query: 274 PGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYND 333
P + D+ + L KKLAPPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYND
Sbjct: 271 PKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYND 330
Query: 334 PIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 393
PIYVKLEKLDIMIRLASQANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER
Sbjct: 331 PIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 390
Query: 394 CVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQEL 453
CVSTLLDLIQTK + A ++ + ++ + L + L P D +
Sbjct: 391 CVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSL--DEP-DARAA 447
Query: 454 VQQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPD 513
+ ++ + DN D F+ +T L LT +V + + L
Sbjct: 448 MIWIVGEYAERIDNADELLESFLEG--FHDESTQVQLTLLTAIVKLFLKKPSETQELVQQ 505
Query: 514 VVNC--MQTDNLELKKLVYLY 532
V++ +DN +L+ Y+Y
Sbjct: 506 VLSLATQDSDNPDLRDRGYIY 526
Score = 423 (154.0 bits), Expect = 5.0e-97, Sum P(3) = 5.0e-97
Identities = 79/89 (88%), Positives = 85/89 (95%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 87 AVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 146
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KL+DINAQ+VEDQGFLD L+DL++DSNPM
Sbjct: 147 KLHDINAQMVEDQGFLDSLRDLIADSNPM 175
Score = 371 (135.7 bits), Expect = 7.3e-70, Sum P(3) = 7.3e-70
Identities = 72/79 (91%), Positives = 78/79 (98%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESFLEGFHDE+TQVQL LLTAIVKLFLK+P++TQELVQQVLSLATQD
Sbjct: 454 EYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQD 513
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRG+IYWRLLST
Sbjct: 514 SDNPDLRDRGYIYWRLLST 532
Score = 358 (131.1 bits), Expect = 3.4e-90, Sum P(3) = 3.4e-90
Identities = 86/198 (43%), Positives = 120/198 (60%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTT KKGEIFELK ELN++ IA+MTVGKDVS+LFPDVVNCMQT
Sbjct: 1 MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLFDLCS 116
DNLELKKLVYLYLMNYAKS PDMAIMA ++F + + + +R+ I + +
Sbjct: 61 DNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITE 120
Query: 117 SVGVFVKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTA 171
+ ++ C +D +P +R A+ V + I + + + LR + D +P V A
Sbjct: 121 YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANA 180
Query: 172 AVCVAKLYDI--NAQLVE 187
++++ + N+ L++
Sbjct: 181 VAALSEISESHPNSNLLD 198
Score = 345 (126.5 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 110/353 (31%), Positives = 176/353 (49%)
Query: 552 VKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTAAVCVA 606
++ C +D +P +R A+ V + I + + + LR + D +P V A ++
Sbjct: 126 LRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALS 185
Query: 607 KLYDI--NAQLVE-DQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQ 663
++ + N+ L++ + +++L L++ + LS N I +
Sbjct: 186 EISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSI---CE 242
Query: 664 TINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAA------VV 717
+ L+ N V +L PKD + +++ P L + V
Sbjct: 243 RVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVA 302
Query: 718 LSAVKVLM-KLMEMLPGEGDFVSTLTKKLAPPL-VTLLSSEPEVQYVALRNINLIVQKRP 775
L + +++ K E+L E + K P+ V L + ++ + NI ++ +
Sbjct: 303 LRNINLIVQKRPEILKQE---IKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELK 359
Query: 776 DILKHEMKVFFVKYN----DPIYVKLEK-LDIMIRLASQANIAQVNYVVQEAIVVIKDIF 830
+ E+ V FV+ +K+E+ + + +VNYVVQEAIVVI+DIF
Sbjct: 360 EYAT-EVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIF 418
Query: 831 RKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFLE 883
RKYPNKYE+II+TLCENLD+LDEP+ARA+MIWI+GEYAERIDNADELLESFLE
Sbjct: 419 RKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLE 471
Score = 43 (20.2 bits), Expect = 5.0e-97, Sum P(3) = 5.0e-97
Identities = 28/124 (22%), Positives = 52/124 (41%)
Query: 748 PLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLA 807
PL TL P ++ L N+ + V+ D+ + N ++V+ K++ + LA
Sbjct: 787 PLNTL---GPVMKMEPLNNLQVAVKNNIDVFYFSC---LIPLN-VLFVEDGKMERQVFLA 839
Query: 808 SQANIAQVN---YVVQEAIVVIKD-IFRKYPNK-YETIISTLCENLDTLDEPEARASMIW 862
+ +I N + +++ + D + K N TI E D L + + IW
Sbjct: 840 TWKDIPNENELQFQIKDCHLNAADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIW 899
Query: 863 IIGE 866
I+ E
Sbjct: 900 ILAE 903
>UNIPROTKB|E1BY12 [details] [associations]
symbol:AP2B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 GeneTree:ENSGT00530000063138
OMA:DCHLNAD EMBL:AADN02025947 EMBL:AADN02025948 EMBL:AADN02025949
IPI:IPI00591263 Ensembl:ENSGALT00000003347 ArrayExpress:E1BY12
Uniprot:E1BY12
Length = 952
Score = 1413 (502.5 bits), Expect = 1.4e-144, P = 1.4e-144
Identities = 279/337 (82%), Positives = 308/337 (91%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIA+MTVGKDVS+LFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVN+FVKDCE
Sbjct: 37 VIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCE 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINAQ+V
Sbjct: 97 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMV 156
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
EDQGFLD L+DL++DSNPMVVANAVAALSE++E+ + L+++N Q INKLLTALNECT
Sbjct: 157 EDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNS-NLLDLNPQNINKLLTALNECT 215
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQ+FILD LSNY+PKDDREAQSICER+TPRL+HAN+AVVLSAVKVLMK +E+LP + D
Sbjct: 216 EWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSD 275
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ + L KKLAPPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYNDPIYVK
Sbjct: 276 YYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVK 335
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
LEKLDIMIRLASQANIAQV ++E A V D RK
Sbjct: 336 LEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRK 372
Score = 594 (214.2 bits), Expect = 6.7e-97, Sum P(3) = 6.7e-97
Identities = 140/261 (53%), Positives = 170/261 (65%)
Query: 274 PGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYND 333
P + D+ + L KKLAPPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYND
Sbjct: 271 PKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYND 330
Query: 334 PIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 393
PIYVKLEKLDIMIRLASQANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER
Sbjct: 331 PIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 390
Query: 394 CVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQEL 453
CVSTLLDLIQTK + A ++ + ++ + L + L P D +
Sbjct: 391 CVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSL--DEP-DARAA 447
Query: 454 VQQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPD 513
+ ++ + DN D F+ +T L LT +V + + L
Sbjct: 448 MIWIVGEYAERIDNADELLESFLEG--FHDESTQVQLTLLTAIVKLFLKKPSETQELVQQ 505
Query: 514 VVNC--MQTDNLELKKLVYLY 532
V++ +DN +L+ Y+Y
Sbjct: 506 VLSLATQDSDNPDLRDRGYIY 526
Score = 423 (154.0 bits), Expect = 6.7e-97, Sum P(3) = 6.7e-97
Identities = 79/89 (88%), Positives = 85/89 (95%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 87 AVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 146
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KL+DINAQ+VEDQGFLD L+DL++DSNPM
Sbjct: 147 KLHDINAQMVEDQGFLDSLRDLIADSNPM 175
Score = 371 (135.7 bits), Expect = 8.1e-70, Sum P(3) = 8.1e-70
Identities = 72/79 (91%), Positives = 78/79 (98%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESFLEGFHDE+TQVQL LLTAIVKLFLK+P++TQELVQQVLSLATQD
Sbjct: 454 EYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQD 513
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRG+IYWRLLST
Sbjct: 514 SDNPDLRDRGYIYWRLLST 532
Score = 358 (131.1 bits), Expect = 4.5e-90, Sum P(3) = 4.5e-90
Identities = 86/198 (43%), Positives = 120/198 (60%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTT KKGEIFELK ELN++ IA+MTVGKDVS+LFPDVVNCMQT
Sbjct: 1 MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLFDLCS 116
DNLELKKLVYLYLMNYAKS PDMAIMA ++F + + + +R+ I + +
Sbjct: 61 DNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITE 120
Query: 117 SVGVFVKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTA 171
+ ++ C +D +P +R A+ V + I + + + LR + D +P V A
Sbjct: 121 YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANA 180
Query: 172 AVCVAKLYDI--NAQLVE 187
++++ + N+ L++
Sbjct: 181 VAALSEISESHPNSNLLD 198
Score = 345 (126.5 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 110/353 (31%), Positives = 176/353 (49%)
Query: 552 VKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTAAVCVA 606
++ C +D +P +R A+ V + I + + + LR + D +P V A ++
Sbjct: 126 LRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALS 185
Query: 607 KLYDI--NAQLVE-DQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQ 663
++ + N+ L++ + +++L L++ + LS N I +
Sbjct: 186 EISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSI---CE 242
Query: 664 TINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAA------VV 717
+ L+ N V +L PKD + +++ P L + V
Sbjct: 243 RVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVA 302
Query: 718 LSAVKVLM-KLMEMLPGEGDFVSTLTKKLAPPL-VTLLSSEPEVQYVALRNINLIVQKRP 775
L + +++ K E+L E + K P+ V L + ++ + NI ++ +
Sbjct: 303 LRNINLIVQKRPEILKQE---IKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELK 359
Query: 776 DILKHEMKVFFVKYN----DPIYVKLEK-LDIMIRLASQANIAQVNYVVQEAIVVIKDIF 830
+ E+ V FV+ +K+E+ + + +VNYVVQEAIVVI+DIF
Sbjct: 360 EYAT-EVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIF 418
Query: 831 RKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFLE 883
RKYPNKYE+II+TLCENLD+LDEP+ARA+MIWI+GEYAERIDNADELLESFLE
Sbjct: 419 RKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLE 471
Score = 43 (20.2 bits), Expect = 6.7e-97, Sum P(3) = 6.7e-97
Identities = 28/124 (22%), Positives = 52/124 (41%)
Query: 748 PLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLA 807
PL TL P ++ L N+ + V+ D+ + N ++V+ K++ + LA
Sbjct: 801 PLNTL---GPVMKMEPLNNLQVAVKNNIDVFYFSC---LIPLN-VLFVEDGKMERQVFLA 853
Query: 808 SQANIAQVN---YVVQEAIVVIKD-IFRKYPNK-YETIISTLCENLDTLDEPEARASMIW 862
+ +I N + +++ + D + K N TI E D L + + IW
Sbjct: 854 TWKDIPNENELQFQIKDCHLNAADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIW 913
Query: 863 IIGE 866
I+ E
Sbjct: 914 ILAE 917
>ZFIN|ZDB-GENE-030131-6564 [details] [associations]
symbol:ap2b1 "adaptor-related protein complex 2,
beta 1 subunit" species:7955 "Danio rerio" [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
ZFIN:ZDB-GENE-030131-6564 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
HOVERGEN:HBG050515 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 EMBL:BC049138 IPI:IPI00511115
UniGene:Dr.150746 ProteinModelPortal:Q7ZUF4 SMR:Q7ZUF4
ArrayExpress:Q7ZUF4 Uniprot:Q7ZUF4
Length = 951
Score = 1407 (500.3 bits), Expect = 5.9e-144, P = 5.9e-144
Identities = 277/337 (82%), Positives = 308/337 (91%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIA+MTVGKDVS+LFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVN+FVKDCE
Sbjct: 37 VIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCE 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINAQ+V
Sbjct: 97 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMV 156
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
EDQGFLD L+DL++DSNPMVVANAVAALSE++E+ + L+++N Q INKLLTALNECT
Sbjct: 157 EDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNS-NLLDLNPQNINKLLTALNECT 215
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQ+FILD LSNY+PKD+REAQSICER+TPRL+HAN+AVVLSAVKVLMK +E+LP + D
Sbjct: 216 EWGQIFILDCLSNYNPKDEREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSD 275
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ +TL KKL+PPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYNDPIYVK
Sbjct: 276 YYNTLLKKLSPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVK 335
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
LEKLDIMIRLAS ANIAQV ++E A V D RK
Sbjct: 336 LEKLDIMIRLASHANIAQVLAELKEYATEVDVDFVRK 372
Score = 591 (213.1 bits), Expect = 4.6e-97, Sum P(3) = 4.6e-97
Identities = 139/261 (53%), Positives = 170/261 (65%)
Query: 274 PGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYND 333
P + D+ +TL KKL+PPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYND
Sbjct: 271 PKDSDYYNTLLKKLSPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYND 330
Query: 334 PIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 393
PIYVKLEKLDIMIRLAS ANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER
Sbjct: 331 PIYVKLEKLDIMIRLASHANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 390
Query: 394 CVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQEL 453
CVSTLLDLIQTK + A ++ + ++ + L + L P D +
Sbjct: 391 CVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSL--DEP-DARGA 447
Query: 454 VQQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPD 513
+ ++ + DN D F+ +T L LT +V + + L
Sbjct: 448 MIWIVGEYAERIDNADELLESFLEG--FHDESTQVQLTLLTAIVKLFLKKPSETQELVQQ 505
Query: 514 VVNC--MQTDNLELKKLVYLY 532
V++ +DN +L+ Y+Y
Sbjct: 506 VLSLATQDSDNPDLRDRGYIY 526
Score = 423 (154.0 bits), Expect = 4.6e-97, Sum P(3) = 4.6e-97
Identities = 79/89 (88%), Positives = 85/89 (95%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 87 AVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 146
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KL+DINAQ+VEDQGFLD L+DL++DSNPM
Sbjct: 147 KLHDINAQMVEDQGFLDSLRDLIADSNPM 175
Score = 371 (135.7 bits), Expect = 1.9e-70, Sum P(3) = 1.9e-70
Identities = 72/79 (91%), Positives = 78/79 (98%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESFLEGFHDE+TQVQL LLTAIVKLFLK+P++TQELVQQVLSLATQD
Sbjct: 454 EYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQD 513
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRG+IYWRLLST
Sbjct: 514 SDNPDLRDRGYIYWRLLST 532
Score = 358 (131.1 bits), Expect = 3.1e-90, Sum P(3) = 3.1e-90
Identities = 86/198 (43%), Positives = 120/198 (60%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTT KKGEIFELK ELN++ IA+MTVGKDVS+LFPDVVNCMQT
Sbjct: 1 MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLFDLCS 116
DNLELKKLVYLYLMNYAKS PDMAIMA ++F + + + +R+ I + +
Sbjct: 61 DNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITE 120
Query: 117 SVGVFVKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTA 171
+ ++ C +D +P +R A+ V + I + + + LR + D +P V A
Sbjct: 121 YLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANA 180
Query: 172 AVCVAKLYDI--NAQLVE 187
++++ + N+ L++
Sbjct: 181 VAALSEISESHPNSNLLD 198
Score = 343 (125.8 bits), Expect = 1.8e-27, P = 1.8e-27
Identities = 107/352 (30%), Positives = 175/352 (49%)
Query: 552 VKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTAAVCVA 606
++ C +D +P +R A+ V + I + + + LR + D +P V A ++
Sbjct: 126 LRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALS 185
Query: 607 KLYDI--NAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQT 664
++ + N+ L++ + LL+ N + L ++ + + +
Sbjct: 186 EISESHPNSNLLDLNP--QNINKLLTALNECTEWGQIFILDCLSNYNPKDEREAQSICER 243
Query: 665 INKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAA------VVL 718
+ L+ N V +L PKD ++ ++++P L + V L
Sbjct: 244 VTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNTLLKKLSPPLVTLLSGEPEVQYVAL 303
Query: 719 SAVKVLM-KLMEMLPGEGDFVSTLTKKLAPPL-VTLLSSEPEVQYVALRNINLIVQKRPD 776
+ +++ K E+L E + K P+ V L + ++ + NI ++ + +
Sbjct: 304 RNINLIVQKRPEILKQE---IKVFFVKYNDPIYVKLEKLDIMIRLASHANIAQVLAELKE 360
Query: 777 ILKHEMKVFFVKYN----DPIYVKLEK-LDIMIRLASQANIAQVNYVVQEAIVVIKDIFR 831
E+ V FV+ +K+E+ + + +VNYVVQEAIVVI+DIFR
Sbjct: 361 YAT-EVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFR 419
Query: 832 KYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFLE 883
KYPNKYE+II+TLCENLD+LDEP+AR +MIWI+GEYAERIDNADELLESFLE
Sbjct: 420 KYPNKYESIIATLCENLDSLDEPDARGAMIWIVGEYAERIDNADELLESFLE 471
Score = 49 (22.3 bits), Expect = 4.6e-97, Sum P(3) = 4.6e-97
Identities = 29/142 (20%), Positives = 57/142 (40%)
Query: 730 MLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHE----MKVF 785
+LP + + + ++ PL T+ P ++ L N+ + V+ D+ + VF
Sbjct: 783 LLPVHTPLMPSQSIDISLPLNTI---GPVMKMDPLNNLQVAVKNNIDVFYFSTLIPLNVF 839
Query: 786 FVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYP-NKYETIISTL 844
FV+ K+E+ + N ++ Y +++ + + K N TI
Sbjct: 840 FVEDG-----KMERQVFLATWKDIPNENELQYQIKDCHLNADTVSGKLQSNNVYTIAKRN 894
Query: 845 CENLDTLDEPEARASMIWIIGE 866
E D L + + IWI+ E
Sbjct: 895 VEGQDMLYQSLKLTNGIWILAE 916
>WB|WBGene00000160 [details] [associations]
symbol:apb-1 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030131 "clathrin adaptor
complex" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0002119 GO:GO:0008565 GO:GO:0000003
HOGENOM:HOG000163270 KO:K11825 GO:GO:0030131 Gene3D:2.60.40.1150
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
SUPFAM:SSF55711 SUPFAM:SSF49348 OMA:PGNPSCT
GeneTree:ENSGT00530000063138 EMBL:FO081557 UniGene:Cel.22457
GeneID:175376 KEGG:cel:CELE_Y71H2B.10 UCSC:Y71H2B.10a CTD:175376
NextBio:887890 RefSeq:NP_001022937.1 ProteinModelPortal:Q9N4F3
SMR:Q9N4F3 DIP:DIP-27411N IntAct:Q9N4F3 MINT:MINT-116366
STRING:Q9N4F3 PRIDE:Q9N4F3 EnsemblMetazoa:Y71H2B.10a.1
EnsemblMetazoa:Y71H2B.10a.2 WormBase:Y71H2B.10a InParanoid:Q9N4F3
ArrayExpress:Q9N4F3 Uniprot:Q9N4F3
Length = 955
Score = 1372 (488.0 bits), Expect = 3.0e-140, P = 3.0e-140
Identities = 268/337 (79%), Positives = 305/337 (90%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIASMTVGKDVSALFPDVVNCMQTDN+ELKKLVYLYLMNYAKS PD+AIMAVNTFVKDCE
Sbjct: 37 VIASMTVGKDVSALFPDVVNCMQTDNVELKKLVYLYLMNYAKSQPDLAIMAVNTFVKDCE 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRV+KITEYLC+PLR+C+KDEDPYVRKTAAVCVAKL+D+N LV
Sbjct: 97 DPNPLIRALAVRTMGCIRVEKITEYLCDPLRRCMKDEDPYVRKTAAVCVAKLHDMNPALV 156
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
++QGF++ L DLLSD+NPMVVANAVAAL+EMNE T +IE+N+Q +NKLLTALNECT
Sbjct: 157 KEQGFVELLNDLLSDANPMVVANAVAALTEMNEQQT----VIEVNSQMVNKLLTALNECT 212
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQVFILD+L+ Y+P+D+RE Q+ICERI+PRLAHANAAVVLS VKVLMKL++M+P + D
Sbjct: 213 EWGQVFILDALAGYTPRDERETQNICERISPRLAHANAAVVLSTVKVLMKLIDMMPADSD 272
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
F++ LTKKLAPP+VTLLS+EPE+QYVALRNINLIVQKRPDILK EMKVFFVKYNDPIYVK
Sbjct: 273 FITQLTKKLAPPMVTLLSAEPEIQYVALRNINLIVQKRPDILKQEMKVFFVKYNDPIYVK 332
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
+EKLDIMIRLA Q NIAQV ++E A V D RK
Sbjct: 333 MEKLDIMIRLAQQNNIAQVLSELKEYATEVDVDFVRK 369
Score = 909 (325.0 bits), Expect = 1.0e-126, Sum P(2) = 1.0e-126
Identities = 222/419 (52%), Positives = 269/419 (64%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTTTKKGEIFELK ELNSD IASMTVGKDVSALFPDVVNCMQT
Sbjct: 1 MTDSKYFTTTKKGEIFELKNELNSDKKEKKKEAVKKVIASMTVGKDVSALFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRSIPLFDLCSSVG 119
DN+ELKKLVYLYLMNYAKS PD+AIMA +TF + + + +R++ + +
Sbjct: 61 DNVELKKLVYLYLMNYAKSQPDLAIMAVNTFVKDCEDPNPLIRALAVRTMGCIRV-EKIT 119
Query: 120 VFVKD----C-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKT 170
++ D C +D +P +R A+ V + + + E E L L D +P V
Sbjct: 120 EYLCDPLRRCMKDEDPYVRKTAAVCVAKLHDMNPALVKEQGFVELLNDLLSDANPMV--- 176
Query: 171 AAVCVAKLYDINAQ--LVE-DQGFLDQLKDLLSDSNPMXXXXXXXXXXX-XPRKSYWQRN 226
A VA L ++N Q ++E + +++L L++ PR +N
Sbjct: 177 VANAVAALTEMNEQQTVIEVNSQMVNKLLTALNECTEWGQVFILDALAGYTPRDERETQN 236
Query: 227 LSSRKKQICWNLPYLMNLSVIYPAWPLSTINPHTPXXXXXXXXXXXXPGEGDFVSTLTKK 286
+ R I L + N +V+ LST+ P + DF++ LTKK
Sbjct: 237 ICER---ISPRLAHA-NAAVV-----LSTVK-------VLMKLIDMMPADSDFITQLTKK 280
Query: 287 LAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMI 346
LAPP+VTLLS+EPE+QYVALRNINLIVQKRPDILK EMKVFFVKYNDPIYVK+EKLDIMI
Sbjct: 281 LAPPMVTLLSAEPEIQYVALRNINLIVQKRPDILKQEMKVFFVKYNDPIYVKMEKLDIMI 340
Query: 347 RLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK 405
RLA Q NIAQVLSELKEYATEVDVDFVRK+VRAIGRCAIKVE S+ERCV TLL+LIQTK
Sbjct: 341 RLAQQNNIAQVLSELKEYATEVDVDFVRKSVRAIGRCAIKVEASSERCVQTLLELIQTK 399
Score = 360 (131.8 bits), Expect = 2.6e-29, P = 2.6e-29
Identities = 114/353 (32%), Positives = 180/353 (50%)
Query: 552 VKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTAAVCVA 606
++ C +D +P +R A+ V + + + E E L L D +P V A VA
Sbjct: 126 LRRCMKDEDPYVRKTAAVCVAKLHDMNPALVKEQGFVELLNDLLSDANPMV---VANAVA 182
Query: 607 KLYDINAQ--LVE-DQGFLDQLKDLLSDSNP---MVVANAVAALSEMNEASTSGVALIEM 660
L ++N Q ++E + +++L L++ + + +A+A + +E T +
Sbjct: 183 ALTEMNEQQTVIEVNSQMVNKLLTALNECTEWGQVFILDALAGYTPRDERETQNIC---- 238
Query: 661 NAQTINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITP---RLAHANAAVV 717
+ I+ L N V +L L + P D + +++ P L A +
Sbjct: 239 --ERISPRLAHANAAVVLSTVKVLMKLIDMMPADSDFITQLTKKLAPPMVTLLSAEPEIQ 296
Query: 718 LSAVKVLMKLMEMLPG--EGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRP 775
A++ + +++ P + + K P V + + ++ NI ++ +
Sbjct: 297 YVALRNINLIVQKRPDILKQEMKVFFVKYNDPIYVKMEKLDIMIRLAQQNNIAQVLSELK 356
Query: 776 DILKHEMKVFFVKYN----DPIYVKLE-KLDIMIRLASQANIAQVNYVVQEAIVVIKDIF 830
+ E+ V FV+ + +K+E + ++ + +VNYVVQEA+VVIKDIF
Sbjct: 357 EYAT-EVDVDFVRKSVRAIGRCAIKVEASSERCVQTLLELIQTKVNYVVQEAVVVIKDIF 415
Query: 831 RKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFLE 883
RKYPN+YE+IIS LCENLDTLDEPEARASMIWIIGEYAERIDNADELLESF+E
Sbjct: 416 RKYPNRYESIISALCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFVE 468
Score = 356 (130.4 bits), Expect = 1.0e-126, Sum P(2) = 1.0e-126
Identities = 70/78 (89%), Positives = 74/78 (94%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESF+EGFHDENTQVQLQLLTA+VKLFLKRP Q LVQ+VLSLATQD
Sbjct: 451 EYAERIDNADELLESFVEGFHDENTQVQLQLLTAVVKLFLKRPGVAQALVQRVLSLATQD 510
Query: 465 SDNPDLRDRGFIYWRLLS 482
SDNPDLRDRGFIYWRLLS
Sbjct: 511 SDNPDLRDRGFIYWRLLS 528
Score = 52 (23.4 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 309 INLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLSELKEYATEV 368
+N +VQ+ ++K + + +Y I E LD + ++A++ ++ E YA +
Sbjct: 400 VNYVVQEAVVVIKDIFRKYPNRYESIISALCENLDTLDEPEARASMIWIIGE---YAERI 456
Query: 369 D 369
D
Sbjct: 457 D 457
>UNIPROTKB|Q7Z451 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 HOVERGEN:HBG050515
GO:GO:0030131 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 EMBL:AC006237 EMBL:CH471147 UniGene:Hs.514819
HGNC:HGNC:563 ChiTaRS:AP2B1 EMBL:AC015911 EMBL:AC004134
EMBL:AY341427 IPI:IPI00790702 SMR:Q7Z451 STRING:Q7Z451
Ensembl:ENST00000538556 Uniprot:Q7Z451
Length = 880
Score = 1314 (467.6 bits), Expect = 4.2e-134, P = 4.2e-134
Identities = 260/316 (82%), Positives = 287/316 (90%)
Query: 518 MQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDK 577
MQTDNLELKKLVYLYLMNYAKS PDMAIMAVN+FVKDCED NPLIRALAVRTMGCIRVDK
Sbjct: 1 MQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDK 60
Query: 578 ITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVV 637
ITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINAQ+VEDQGFLD L+DL++DSNPMVV
Sbjct: 61 ITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVV 120
Query: 638 ANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTEWGQVFILDSLSNYSPKDDRE 697
ANAVAALSE++E+ + L+++N Q INKLLTALNECTEWGQ+FILD LSNY+PKDDRE
Sbjct: 121 ANAVAALSEISESHPNS-NLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDRE 179
Query: 698 AQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEP 757
AQSICER+TPRL+HAN+AVVLSAVKVLMK +E+LP + D+ + L KKLAPPLVTLLS EP
Sbjct: 180 AQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEP 239
Query: 758 EVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNY 817
EVQYVALRNINLIVQKRP+ILK E+KVFFVKYNDPIYVKLEKLDIMIRLASQANIAQV
Sbjct: 240 EVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLA 299
Query: 818 VVQE-AIVVIKDIFRK 832
++E A V D RK
Sbjct: 300 ELKEYATEVDVDFVRK 315
Score = 594 (214.2 bits), Expect = 2.7e-98, Sum P(3) = 2.7e-98
Identities = 140/261 (53%), Positives = 170/261 (65%)
Query: 274 PGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYND 333
P + D+ + L KKLAPPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYND
Sbjct: 214 PKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYND 273
Query: 334 PIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 393
PIYVKLEKLDIMIRLASQANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER
Sbjct: 274 PIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 333
Query: 394 CVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQEL 453
CVSTLLDLIQTK + A ++ + ++ + L + L P D +
Sbjct: 334 CVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSL--DEP-DARAA 390
Query: 454 VQQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPD 513
+ ++ + DN D F+ +T L LT +V + + L
Sbjct: 391 MIWIVGEYAERIDNADELLESFLEG--FHDESTQVQLTLLTAIVKLFLKKPSETQELVQQ 448
Query: 514 VVNC--MQTDNLELKKLVYLY 532
V++ +DN +L+ Y+Y
Sbjct: 449 VLSLATQDSDNPDLRDRGYIY 469
Score = 423 (154.0 bits), Expect = 2.7e-98, Sum P(3) = 2.7e-98
Identities = 79/89 (88%), Positives = 85/89 (95%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 30 AVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 89
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KL+DINAQ+VEDQGFLD L+DL++DSNPM
Sbjct: 90 KLHDINAQMVEDQGFLDSLRDLIADSNPM 118
Score = 371 (135.7 bits), Expect = 1.3e-70, Sum P(3) = 1.3e-70
Identities = 72/79 (91%), Positives = 78/79 (98%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESFLEGFHDE+TQVQL LLTAIVKLFLK+P++TQELVQQVLSLATQD
Sbjct: 397 EYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQD 456
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRG+IYWRLLST
Sbjct: 457 SDNPDLRDRGYIYWRLLST 475
Score = 345 (126.5 bits), Expect = 9.5e-28, P = 9.5e-28
Identities = 110/353 (31%), Positives = 176/353 (49%)
Query: 552 VKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTAAVCVA 606
++ C +D +P +R A+ V + I + + + LR + D +P V A ++
Sbjct: 69 LRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALS 128
Query: 607 KLYDI--NAQLVE-DQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQ 663
++ + N+ L++ + +++L L++ + LS N I +
Sbjct: 129 EISESHPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSI---CE 185
Query: 664 TINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAA------VV 717
+ L+ N V +L PKD + +++ P L + V
Sbjct: 186 RVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVA 245
Query: 718 LSAVKVLM-KLMEMLPGEGDFVSTLTKKLAPPL-VTLLSSEPEVQYVALRNINLIVQKRP 775
L + +++ K E+L E + K P+ V L + ++ + NI ++ +
Sbjct: 246 LRNINLIVQKRPEILKQE---IKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELK 302
Query: 776 DILKHEMKVFFVKYN----DPIYVKLEK-LDIMIRLASQANIAQVNYVVQEAIVVIKDIF 830
+ E+ V FV+ +K+E+ + + +VNYVVQEAIVVI+DIF
Sbjct: 303 EYAT-EVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIF 361
Query: 831 RKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFLE 883
RKYPNKYE+II+TLCENLD+LDEP+ARA+MIWI+GEYAERIDNADELLESFLE
Sbjct: 362 RKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLESFLE 414
Score = 163 (62.4 bits), Expect = 5.2e-71, Sum P(3) = 5.2e-71
Identities = 47/141 (33%), Positives = 77/141 (54%)
Query: 58 MQTDNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLFD 113
MQTDNLELKKLVYLYLMNYAKS PDMAIMA ++F + + + +R+ I +
Sbjct: 1 MQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDK 60
Query: 114 LCSSVGVFVKDC-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVR 168
+ + ++ C +D +P +R A+ V + I + + + LR + D +P V
Sbjct: 61 ITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVV 120
Query: 169 KTAAVCVAKLYDI--NAQLVE 187
A ++++ + N+ L++
Sbjct: 121 ANAVAALSEISESHPNSNLLD 141
Score = 48 (22.0 bits), Expect = 2.7e-98, Sum P(3) = 2.7e-98
Identities = 28/123 (22%), Positives = 51/123 (41%)
Query: 748 PLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLA 807
PL TL P ++ L N+ + V+ D+ + N ++V+ K++ + LA
Sbjct: 730 PLNTL---GPVMKMEPLNNLQVAVKNNIDVFYFSC---LIPLN-VLFVEDGKMERQVFLA 782
Query: 808 SQANIAQVN---YVVQEAIVVIKDIFRKYPNK-YETIISTLCENLDTLDEPEARASMIWI 863
+ +I N + ++E + + K N TI E D L + + IWI
Sbjct: 783 TWKDIPNENELQFQIKECHLNADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWI 842
Query: 864 IGE 866
+ E
Sbjct: 843 LAE 845
>TAIR|locus:2117924 [details] [associations]
symbol:AT4G23460 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0030276 "clathrin
binding" evidence=ISS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013037
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020 InterPro:IPR013041
GO:GO:0005886 GO:GO:0009506 GO:GO:0005794 GO:GO:0006886
EMBL:CP002687 GenomeReviews:CT486007_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 GO:GO:0006897
eggNOG:COG5096 HOGENOM:HOG000163270 GO:GO:0030131 GO:GO:0030665
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 KO:K12392
OMA:SDPNPLI EMBL:AL031326 EMBL:AL161559 EMBL:AY065000 EMBL:AF216387
IPI:IPI00521980 PIR:T05384 RefSeq:NP_194077.1 UniGene:At.2441
ProteinModelPortal:O81742 SMR:O81742 STRING:O81742 PaxDb:O81742
PRIDE:O81742 EnsemblPlants:AT4G23460.1 GeneID:828445
KEGG:ath:AT4G23460 TAIR:At4g23460 InParanoid:Q8VZF2
PhylomeDB:O81742 ProtClustDB:CLSN2685309 Genevestigator:O81742
Uniprot:O81742
Length = 893
Score = 1247 (444.0 bits), Expect = 5.3e-127, P = 5.3e-127
Identities = 247/337 (73%), Positives = 289/337 (85%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIA+MTVGKDVS+LF DVVNCMQT+NLELKKLVYLYL+NYAKS PD+AI+AVNTFVKD +
Sbjct: 39 VIAAMTVGKDVSSLFTDVVNCMQTENLELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQ 98
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVDKITEYLC+PL+KCLKD+DPYVRKTAA+CVAKL+DINA+LV
Sbjct: 99 DPNPLIRALAVRTMGCIRVDKITEYLCDPLQKCLKDDDPYVRKTAAICVAKLFDINAELV 158
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
ED+GFL+ LKDL+SD+NPMVVANAVAAL+E+ E STS + E+N+ + KLLTALNECT
Sbjct: 159 EDRGFLEALKDLISDNNPMVVANAVAALAEIQENSTSPI--FEINSTILTKLLTALNECT 216
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQVFILD+LS Y D REA++I ER+TPRL HAN AVVLSAVK++++ ME++ D
Sbjct: 217 EWGQVFILDALSRYKASDPREAENIVERVTPRLQHANCAVVLSAVKMILQQMELITST-D 275
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ L KK+APPLVTLLS+EPE+QYVALRNINLIVQKRP IL HE+KVFF KYNDPIYVK
Sbjct: 276 VIRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQKRPTILAHEIKVFFCKYNDPIYVK 335
Query: 797 LEKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
+EKL+IMI+LAS NI QV +E A V D RK
Sbjct: 336 MEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRK 372
Score = 526 (190.2 bits), Expect = 1.0e-84, Sum P(2) = 1.0e-84
Identities = 133/291 (45%), Positives = 174/291 (59%)
Query: 278 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYV 337
D + L KK+APPLVTLLS+EPE+QYVALRNINLIVQKRP IL HE+KVFF KYNDPIYV
Sbjct: 275 DVIRNLCKKMAPPLVTLLSAEPEIQYVALRNINLIVQKRPTILAHEIKVFFCKYNDPIYV 334
Query: 338 KLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 397
K+EKL+IMI+LAS NI QVL E KEYATEVDVDFVRKAVRAIGRCAIK+E++AERC+S
Sbjct: 335 KMEKLEIMIKLASDRNIDQVLLEFKEYATEVDVDFVRKAVRAIGRCAIKLERAAERCISV 394
Query: 398 LLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKL-FLKRPTDTQELVQQ 456
LL+LI+ K + A +++ + NT + + T L L P ++
Sbjct: 395 LLELIKIKVNYVVQEAIIVIKDIFRRY--PNTYESI-IATLCESLDTLDEPEAKASMIW- 450
Query: 457 VLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYILLHLT-RLVIASMTVGKDVSALFPDVV 515
++ + DN D F+ LL T +L + T G + V+
Sbjct: 451 IIGEYAERIDNADELLESFLENFPEEPAQVQLQLLTATVKLFLKKPTEGPQ--QMIQVVL 508
Query: 516 N--CMQTDNLELKKLVYLYLMNYAKSHPDMA---IMAVNTFVKDCEDSNPL 561
N ++TDN +L+ Y+Y + P+ A ++A + D DSN L
Sbjct: 509 NNATVETDNPDLRDRAYIY-WRLLSTDPEAAKDVVLAEKPVITD--DSNQL 556
Score = 395 (144.1 bits), Expect = 1.0e-84, Sum P(2) = 1.0e-84
Identities = 72/89 (80%), Positives = 84/89 (94%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKD +D NPLIRALAVRTMGCIRVDKITEYLC+PL+KCLKD+DPYVRKTAA+CVA
Sbjct: 89 AVNTFVKDSQDPNPLIRALAVRTMGCIRVDKITEYLCDPLQKCLKDDDPYVRKTAAICVA 148
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KL+DINA+LVED+GFL+ LKDL+SD+NPM
Sbjct: 149 KLFDINAELVEDRGFLEALKDLISDNNPM 177
Score = 352 (129.0 bits), Expect = 1.7e-28, P = 1.7e-28
Identities = 112/347 (32%), Positives = 175/347 (50%)
Query: 553 KDCEDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTAAVCVAKL 608
K +D +P +R A+ V + I + + + E L+ + D +P V A +A++
Sbjct: 130 KCLKDDDPYVRKTAAICVAKLFDINAELVEDRGFLEALKDLISDNNPMVVANAVAALAEI 189
Query: 609 YDINAQ-LVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINK 667
+ + + E + L LL+ N V L ++ S E + +
Sbjct: 190 QENSTSPIFEINSTI--LTKLLTALNECTEWGQVFILDALSRYKASDPREAENIVERVTP 247
Query: 668 LLTALNECTEWGQV-FILDSLSNYSPKDDREAQSICERITPRLA---HANAAVVLSAVKV 723
L N V IL + + D +++C+++ P L A + A++
Sbjct: 248 RLQHANCAVVLSAVKMILQQMELITSTD--VIRNLCKKMAPPLVTLLSAEPEIQYVALRN 305
Query: 724 LMKLMEMLPGE-GDFVSTLTKKLAPPL-VTLLSSEPEVQYVALRNINLIVQKRPDILKHE 781
+ +++ P + K P+ V + E ++ + RNI+ ++ + + E
Sbjct: 306 INLIVQKRPTILAHEIKVFFCKYNDPIYVKMEKLEIMIKLASDRNIDQVLLEFKEYAT-E 364
Query: 782 MKVFFVKYN----DPIYVKLEKL-DIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNK 836
+ V FV+ +KLE+ + I + + +VNYVVQEAI+VIKDIFR+YPN
Sbjct: 365 VDVDFVRKAVRAIGRCAIKLERAAERCISVLLELIKIKVNYVVQEAIIVIKDIFRRYPNT 424
Query: 837 YETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFLE 883
YE+II+TLCE+LDTLDEPEA+ASMIWIIGEYAERIDNADELLESFLE
Sbjct: 425 YESIIATLCESLDTLDEPEAKASMIWIIGEYAERIDNADELLESFLE 471
Score = 324 (119.1 bits), Expect = 3.1e-77, Sum P(2) = 3.1e-77
Identities = 79/188 (42%), Positives = 111/188 (59%)
Query: 3 DSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDN 62
DSKYF+TTKKGEI ELK ELNS IA+MTVGKDVS+LF DVVNCMQT+N
Sbjct: 5 DSKYFSTTKKGEIPELKEELNSQYKDKRKDAVKKVIAAMTVGKDVSSLFTDVVNCMQTEN 64
Query: 63 LELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQKSSSS-FQCMIDIRSIPLFDLCSSVGVF 121
LELKKLVYLYL+NYAKS PD+AI+A +TF + + +R++ + + +
Sbjct: 65 LELKKLVYLYLINYAKSQPDLAILAVNTFVKDSQDPNPLIRALAVRTMGCIRV-DKITEY 123
Query: 122 VKD----C-EDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTAA 172
+ D C +D +P +R A+ V + I + + + E L+ + D +P V A
Sbjct: 124 LCDPLQKCLKDDDPYVRKTAAICVAKLFDINAELVEDRGFLEALKDLISDNNPMVVANAV 183
Query: 173 VCVAKLYD 180
+A++ +
Sbjct: 184 AALAEIQE 191
>UNIPROTKB|G4N974 [details] [associations]
symbol:MGG_03320 "AP-1 complex subunit beta-1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602
PIRSF:PIRSF002291 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 GO:GO:0008565
GO:GO:0043581 PANTHER:PTHR11134 EMBL:CM001234 RefSeq:XP_003716637.1
ProteinModelPortal:G4N974 SMR:G4N974 EnsemblFungi:MGG_03320T0
GeneID:2676863 KEGG:mgr:MGG_03320 Uniprot:G4N974
Length = 738
Score = 997 (356.0 bits), Expect = 1.7e-100, P = 1.7e-100
Identities = 195/336 (58%), Positives = 260/336 (77%)
Query: 498 IASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCED 557
I +MT+GKDVSALFPDV+ + T +L+ KKLVYLYLMNYAKSHPD+ I+AVNTFV+D ED
Sbjct: 42 IMAMTLGKDVSALFPDVLKNIATADLDQKKLVYLYLMNYAKSHPDLCILAVNTFVQDSED 101
Query: 558 SNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVE 617
NPLIRALA+RTMGCIRVDK+ +Y+ EPLRK L+DE PYVRKTAA+CVAKL+D+N +
Sbjct: 102 PNPLIRALAIRTMGCIRVDKMVDYMEEPLRKTLRDESPYVRKTAAICVAKLFDLNPTMCI 161
Query: 618 DQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTE 677
+ GFL+ L++L+ D NPMVVAN+V ALSE+ E + AL+ + T+ KLL ALNECTE
Sbjct: 162 ENGFLETLQELIGDPNPMVVANSVQALSEIAETAPETRALV-ITPATLKKLLMALNECTE 220
Query: 678 WGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDF 737
WG+V IL +L++Y P D +E++ +CER+ P+ H N +VVL+AVKV+ M+++ D
Sbjct: 221 WGRVTILSTLADYPPSDVKESEHVCERVAPQFQHVNPSVVLAAVKVVFIHMKVI--NPDS 278
Query: 738 VSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKL 797
V KK+APPLVTL++S PEVQYVALRNI+L++Q +PDIL E++VFF KYNDP YVK+
Sbjct: 279 VRQYLKKMAPPLVTLVASAPEVQYVALRNIDLLLQAKPDILSKELRVFFCKYNDPPYVKM 338
Query: 798 EKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRK 832
+KL+IM+R+A+ N Q+ ++E A+ V D R+
Sbjct: 339 QKLEIMVRIANDKNFEQLLAELKEYALEVDMDFVRR 374
Score = 431 (156.8 bits), Expect = 1.2e-109, Sum P(4) = 1.2e-109
Identities = 81/128 (63%), Positives = 108/128 (84%)
Query: 278 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYV 337
D V KK+APPLVTL++S PEVQYVALRNI+L++Q +PDIL E++VFF KYNDP YV
Sbjct: 277 DSVRQYLKKMAPPLVTLVASAPEVQYVALRNIDLLLQAKPDILSKELRVFFCKYNDPPYV 336
Query: 338 KLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 397
K++KL+IM+R+A+ N Q+L+ELKEYA EVD+DFVR+AV+AIG+ AIK+E ++E+CV+
Sbjct: 337 KMQKLEIMVRIANDKNFEQLLAELKEYALEVDMDFVRRAVKAIGQVAIKIESASEKCVNA 396
Query: 398 LLDLIQTK 405
LLDL+ TK
Sbjct: 397 LLDLMATK 404
Score = 322 (118.4 bits), Expect = 1.2e-109, Sum P(4) = 1.2e-109
Identities = 60/94 (63%), Positives = 76/94 (80%)
Query: 113 DLCS-SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTA 171
DLC +V FV+D ED NPLIRALA+RTMGCIRVDK+ +Y+ EPLRK L+DE PYVRKTA
Sbjct: 86 DLCILAVNTFVQDSEDPNPLIRALAIRTMGCIRVDKMVDYMEEPLRKTLRDESPYVRKTA 145
Query: 172 AVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
A+CVAKL+D+N + + GFL+ L++L+ D NPM
Sbjct: 146 AICVAKLFDLNPTMCIENGFLETLQELIGDPNPM 179
Score = 271 (100.5 bits), Expect = 1.2e-109, Sum P(4) = 1.2e-109
Identities = 49/78 (62%), Positives = 66/78 (84%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAE+I NADE++ +F++GF +E TQ QLQ+LTA VKLFLK+P++ Q LVQ+VL AT D
Sbjct: 455 EYAEKISNADEIISTFVDGFMEEFTQTQLQILTAAVKLFLKKPSNNQGLVQKVLQQATAD 514
Query: 465 SDNPDLRDRGFIYWRLLS 482
+DNPD+RDR ++YWRLLS
Sbjct: 515 NDNPDIRDRAYVYWRLLS 532
Score = 267 (99.0 bits), Expect = 3.2e-37, Sum P(3) = 3.2e-37
Identities = 99/348 (28%), Positives = 154/348 (44%)
Query: 553 KDCEDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTAAVCVAKL 608
K D +P +R A+ V + + E E L++ + D +P V A V L
Sbjct: 132 KTLRDESPYVRKTAAICVAKLFDLNPTMCIENGFLETLQELIGDPNPMV---VANSVQAL 188
Query: 609 YDINAQLVEDQGFL---DQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTI 665
+I E + + LK LL N V LS + + S V E + +
Sbjct: 189 SEIAETAPETRALVITPATLKKLLMALNECTEWGRVTILSTLADYPPSDVKESEHVCERV 248
Query: 666 NKLLTALNECTEWGQV-FILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVL 724
+N V + + +P R+ +++ P L A+ L
Sbjct: 249 APQFQHVNPSVVLAAVKVVFIHMKVINPDSVRQ---YLKKMAPPLVTLVASAPEVQYVAL 305
Query: 725 MKLMEMLPGEGDFVST-----LTKKLAPPLVTLLSSEPEVQYVALRNIN-LIVQKRPDIL 778
+ +L + D +S K PP V + E V+ +N L+ + + L
Sbjct: 306 RNIDLLLQAKPDILSKELRVFFCKYNDPPYVKMQKLEIMVRIANDKNFEQLLAELKEYAL 365
Query: 779 KHEMKVF--FVKYNDPIYVKLEKL-DIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPN 835
+ +M VK + +K+E + + +VNYVVQE +VVIKDI RKYP
Sbjct: 366 EVDMDFVRRAVKAIGQVAIKIESASEKCVNALLDLMATKVNYVVQEVVVVIKDILRKYPG 425
Query: 836 KYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFLE 883
YE +I TLCE++D LDEP AR S+IWI+GEYAE+I NADE++ +F++
Sbjct: 426 -YEGVIPTLCEHIDELDEPNARGSLIWIVGEYAEKISNADEIISTFVD 472
Score = 220 (82.5 bits), Expect = 1.2e-109, Sum P(4) = 1.2e-109
Identities = 45/81 (55%), Positives = 56/81 (69%)
Query: 11 KKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVY 70
+KGE FEL+ L S I +MT+GKDVSALFPDV+ + T +L+ KKLVY
Sbjct: 15 RKGETFELRAGLVSQYAYERKEAIQKTIMAMTLGKDVSALFPDVLKNIATADLDQKKLVY 74
Query: 71 LYLMNYAKSHPDMAIMAFSTF 91
LYLMNYAKSHPD+ I+A +TF
Sbjct: 75 LYLMNYAKSHPDLCILAVNTF 95
Score = 51 (23.0 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 25/86 (29%), Positives = 40/86 (46%)
Query: 370 VDFVRKAVRAIGRCAIK-VEQSAERCVSTLLDLIQTKYAERIDNADELLESFLEGFHDEN 428
VD++ + +R R V ++A CV+ L DL T I+N LE+ E D N
Sbjct: 123 VDYMEEPLRKTLRDESPYVRKTAAICVAKLFDLNPTMC---IENG--FLETLQELIGDPN 177
Query: 429 TQVQLQLLTAIVKLFLKRPTDTQELV 454
V + A+ ++ P +T+ LV
Sbjct: 178 PMVVANSVQALSEIAETAP-ETRALV 202
Score = 50 (22.7 bits), Expect = 5.7e-44, Sum P(3) = 5.7e-44
Identities = 28/112 (25%), Positives = 45/112 (40%)
Query: 352 ANIAQVLSELKEYATE-----VDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKY 406
AN Q LSE+ E A E + ++K + A+ C E +STL D +
Sbjct: 182 ANSVQALSEIAETAPETRALVITPATLKKLLMALNECT---EWGRVTILSTLADYPPSDV 238
Query: 407 AERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVL 458
E ++ + E F N V +L A+ +F+ + V+Q L
Sbjct: 239 KE----SEHVCERVAPQFQHVNPSV---VLAAVKVVFIHMKVINPDSVRQYL 283
Score = 45 (20.9 bits), Expect = 3.2e-37, Sum P(3) = 3.2e-37
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 402 IQTKYAERIDN-ADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPT 448
I+T R+D D + E + DE+ V+ + KLF PT
Sbjct: 111 IRTMGCIRVDKMVDYMEEPLRKTLRDESPYVRKTAAICVAKLFDLNPT 158
>GENEDB_PFALCIPARUM|PFE1400c [details] [associations]
symbol:PFE1400c "beta adaptin protein, putative"
species:5833 "Plasmodium falciparum" [GO:0016192 "vesicle-mediated
transport" evidence=ISS] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 HOGENOM:HOG000163270 GO:GO:0030131
Gene3D:2.60.40.1150 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 SUPFAM:SSF55711 SUPFAM:SSF49348 EMBL:AL844504
RefSeq:XP_001351835.2 ProteinModelPortal:Q8I3I6 IntAct:Q8I3I6
MINT:MINT-1744951 PRIDE:Q8I3I6 EnsemblProtists:PFE1400c:mRNA
GeneID:813094 KEGG:pfa:PFE1400c EuPathDB:PlasmoDB:PF3D7_0528100
ProtClustDB:CLSZ2433409 Uniprot:Q8I3I6
Length = 929
Score = 1063 (379.3 bits), Expect = 1.7e-107, P = 1.7e-107
Identities = 200/327 (61%), Positives = 264/327 (80%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
+IA+MTVGKDVS LF DVVNCMQT N+ELKKLVYLY++NYAK P++AI+AVNTF KD
Sbjct: 37 IIAAMTVGKDVSTLFSDVVNCMQTSNIELKKLVYLYVINYAKVQPELAILAVNTFRKDSS 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALA+RTMGCIR+++ITEYL EPLR+CLKDEDPYVRKTA +C+AKLYDI+ +LV
Sbjct: 97 DPNPLIRALAIRTMGCIRLEQITEYLIEPLRRCLKDEDPYVRKTAVICIAKLYDISPKLV 156
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVA--LIEMNAQTINKLLTALNE 674
E++GF+D L D+L D+N MVVANAV +L+++ E S + +I + +NKLL A+NE
Sbjct: 157 EEEGFIDTLLDILDDNNAMVVANAVISLTDICENSNKSILKDVINKDENNVNKLLNAINE 216
Query: 675 CTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGE 734
C EWGQVFILD+L Y PK ++A+ + ERI PRL+HAN+AVVLS++KV++ L++ + +
Sbjct: 217 CVEWGQVFILDALVLYEPKTSKDAERVLERILPRLSHANSAVVLSSIKVILCLLDKI-ND 275
Query: 735 GDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIY 794
+F+ + KKL+P LVTLLS+EPE+QY+ALRNINLI QK P++L ++ +FF KYN+P Y
Sbjct: 276 KEFIKNVHKKLSPSLVTLLSAEPEIQYIALRNINLITQKLPNMLSDKINMFFCKYNEPAY 335
Query: 795 VKLEKLDIMIRLASQANIAQVNYVVQE 821
VK+EKLDI+IRL S N+ V Y ++E
Sbjct: 336 VKMEKLDIIIRLVSDKNVDLVLYELKE 362
Score = 435 (158.2 bits), Expect = 4.2e-68, Sum P(2) = 4.2e-68
Identities = 82/128 (64%), Positives = 107/128 (83%)
Query: 278 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYV 337
+F+ + KKL+P LVTLLS+EPE+QY+ALRNINLI QK P++L ++ +FF KYN+P YV
Sbjct: 277 EFIKNVHKKLSPSLVTLLSAEPEIQYIALRNINLITQKLPNMLSDKINMFFCKYNEPAYV 336
Query: 338 KLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 397
K+EKLDI+IRL S N+ VL ELKEY+TEVDV+FV+K+VRAIG CAIK+ QS+E+C++
Sbjct: 337 KMEKLDIIIRLVSDKNVDLVLYELKEYSTEVDVEFVKKSVRAIGSCAIKLPQSSEKCINI 396
Query: 398 LLDLIQTK 405
LLDLI TK
Sbjct: 397 LLDLIDTK 404
Score = 339 (124.4 bits), Expect = 4.2e-68, Sum P(2) = 4.2e-68
Identities = 61/89 (68%), Positives = 76/89 (85%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V F KD D NPLIRALA+RTMGCIR+++ITEYL EPLR+CLKDEDPYVRKTA +C+A
Sbjct: 87 AVNTFRKDSSDPNPLIRALAIRTMGCIRLEQITEYLIEPLRRCLKDEDPYVRKTAVICIA 146
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KLYDI+ +LVE++GF+D L D+L D+N M
Sbjct: 147 KLYDISPKLVEEEGFIDTLLDILDDNNAM 175
Score = 320 (117.7 bits), Expect = 3.3e-50, Sum P(2) = 3.3e-50
Identities = 108/353 (30%), Positives = 180/353 (50%)
Query: 552 VKDC-EDSNPLIRALAVRTMGCIR--VDKITEY--LCEPLRKCLKDEDPYVRKTAAVCVA 606
++ C +D +P +R AV + + K+ E + L L D + V A + +
Sbjct: 126 LRRCLKDEDPYVRKTAVICIAKLYDISPKLVEEEGFIDTLLDILDDNNAMVVANAVISLT 185
Query: 607 KLYD-INAQLVEDQGFLDQ--LKDLLSDSNPMVVANAVAALSEM--NEASTSGVALIEMN 661
+ + N +++D D+ + LL+ N V V L + E TS A E
Sbjct: 186 DICENSNKSILKDVINKDENNVNKLLNAINECVEWGQVFILDALVLYEPKTSKDA--ERV 243
Query: 662 AQTINKLLTALNECTEWGQVFILDSLSNYSPKDDRE-AQSICERITPRLA---HANAAVV 717
+ I L+ N + ++ L +D+E +++ ++++P L A +
Sbjct: 244 LERILPRLSHANSAVVLSSIKVI--LCLLDKINDKEFIKNVHKKLSPSLVTLLSAEPEIQ 301
Query: 718 LSAVKVLMKLMEMLPGE-GDFVSTLTKKL-APPLVTLLSSEPEVQYVALRNINLIVQKRP 775
A++ + + + LP D ++ K P V + + ++ V+ +N++L++ +
Sbjct: 302 YIALRNINLITQKLPNMLSDKINMFFCKYNEPAYVKMEKLDIIIRLVSDKNVDLVLYELK 361
Query: 776 DILKHEMKVFFVKYN----DPIYVKL-EKLDIMIRLASQANIAQVNYVVQEAIVVIKDIF 830
+ E+ V FVK + +KL + + I + ++NYV+QE IVVIKDIF
Sbjct: 362 EY-STEVDVEFVKKSVRAIGSCAIKLPQSSEKCINILLDLIDTKINYVIQECIVVIKDIF 420
Query: 831 RKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFLE 883
RKYPNKYE+II+ LCENL++LDE A+AS+IWIIGEY ERIDNADEL++SFLE
Sbjct: 421 RKYPNKYESIITILCENLESLDESNAKASLIWIIGEYVERIDNADELIDSFLE 473
Score = 291 (107.5 bits), Expect = 4.8e-63, Sum P(2) = 4.8e-63
Identities = 70/144 (48%), Positives = 90/144 (62%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
M+D +YF TTKKGEI ELK EL+S IA+MTVGKDVS LF DVVNCMQT
Sbjct: 1 MSDLRYFQTTKKGEIHELKEELHSSHKEKKKEAIKKIIAAMTVGKDVSTLFSDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQKSSSSFQCMID---IRSIPLFDLCSS 117
N+ELKKLVYLY++NYAK P++AI+A +TF +K SS +I IR++ L
Sbjct: 61 SNIELKKLVYLYVINYAKVQPELAILAVNTF--RKDSSDPNPLIRALAIRTMGCIRLEQI 118
Query: 118 VGVFVKD---C-EDSNPLIRALAV 137
++ C +D +P +R AV
Sbjct: 119 TEYLIEPLRRCLKDEDPYVRKTAV 142
Score = 277 (102.6 bits), Expect = 7.7e-51, Sum P(2) = 7.7e-51
Identities = 76/203 (37%), Positives = 114/203 (56%)
Query: 289 PPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYN----DPIYVKL----E 340
P V + + ++ V+ +N++L++ + + E+ V FVK + +KL E
Sbjct: 333 PAYVKMEKLDIIIRLVSDKNVDLVLYELKEY-STEVDVEFVKKSVRAIGSCAIKLPQSSE 391
Query: 341 K-LDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLL 399
K ++I++ L I V+ E ++ + K I +E E L
Sbjct: 392 KCINILLDLID-TKINYVIQECIVVIKDIFRKYPNKYESIITILCENLESLDESNAKASL 450
Query: 400 DLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLS 459
I +Y ERIDNADEL++SFLE F DE VQLQ+LTA VKLFLK +T++++ +VL
Sbjct: 451 IWIIGEYVERIDNADELIDSFLENFSDEPYNVQLQILTASVKLFLKCSKNTKDIITKVLK 510
Query: 460 LATQDSDNPDLRDRGFIYWRLLS 482
L+T++SDNPDLRDR +IYWRLLS
Sbjct: 511 LSTEESDNPDLRDRAYIYWRLLS 533
Score = 50 (22.7 bits), Expect = 9.4e-22, Sum P(2) = 9.4e-22
Identities = 43/195 (22%), Positives = 83/195 (42%)
Query: 283 LTKKLAPPLVTLLSSE-PEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEK 341
+T+ L PL L E P V+ A+ I + P +++ E F+ D + L+
Sbjct: 118 ITEYLIEPLRRCLKDEDPYVRKTAVICIAKLYDISPKLVEEEG---FI---DTLLDILDD 171
Query: 342 LDIMIRLASQANIAQVLSELKEYATE-VDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLD 400
+ M+ AN L+++ E + + + D + K + + + + E +LD
Sbjct: 172 NNAMV----VANAVISLTDICENSNKSILKDVINKDENNVNKLLNAINECVEWGQVFILD 227
Query: 401 LIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQEL--VQQVL 458
+ + +A+ +LE L N+ V L + I+ L L + D + + V + L
Sbjct: 228 ALVLYEPKTSKDAERVLERILPRLSHANSAVVLSSIKVILCL-LDKINDKEFIKNVHKKL 286
Query: 459 S--LATQDSDNPDLR 471
S L T S P+++
Sbjct: 287 SPSLVTLLSAEPEIQ 301
>UNIPROTKB|Q8I3I6 [details] [associations]
symbol:PFE1400c "Beta adaptin protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016192
"vesicle-mediated transport" evidence=ISS] InterPro:IPR002553
InterPro:IPR009028 InterPro:IPR013037 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM01020
InterPro:IPR013041 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 HOGENOM:HOG000163270
GO:GO:0030131 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 EMBL:AL844504 RefSeq:XP_001351835.2
ProteinModelPortal:Q8I3I6 IntAct:Q8I3I6 MINT:MINT-1744951
PRIDE:Q8I3I6 EnsemblProtists:PFE1400c:mRNA GeneID:813094
KEGG:pfa:PFE1400c EuPathDB:PlasmoDB:PF3D7_0528100
ProtClustDB:CLSZ2433409 Uniprot:Q8I3I6
Length = 929
Score = 1063 (379.3 bits), Expect = 1.7e-107, P = 1.7e-107
Identities = 200/327 (61%), Positives = 264/327 (80%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
+IA+MTVGKDVS LF DVVNCMQT N+ELKKLVYLY++NYAK P++AI+AVNTF KD
Sbjct: 37 IIAAMTVGKDVSTLFSDVVNCMQTSNIELKKLVYLYVINYAKVQPELAILAVNTFRKDSS 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALA+RTMGCIR+++ITEYL EPLR+CLKDEDPYVRKTA +C+AKLYDI+ +LV
Sbjct: 97 DPNPLIRALAIRTMGCIRLEQITEYLIEPLRRCLKDEDPYVRKTAVICIAKLYDISPKLV 156
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVA--LIEMNAQTINKLLTALNE 674
E++GF+D L D+L D+N MVVANAV +L+++ E S + +I + +NKLL A+NE
Sbjct: 157 EEEGFIDTLLDILDDNNAMVVANAVISLTDICENSNKSILKDVINKDENNVNKLLNAINE 216
Query: 675 CTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGE 734
C EWGQVFILD+L Y PK ++A+ + ERI PRL+HAN+AVVLS++KV++ L++ + +
Sbjct: 217 CVEWGQVFILDALVLYEPKTSKDAERVLERILPRLSHANSAVVLSSIKVILCLLDKI-ND 275
Query: 735 GDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIY 794
+F+ + KKL+P LVTLLS+EPE+QY+ALRNINLI QK P++L ++ +FF KYN+P Y
Sbjct: 276 KEFIKNVHKKLSPSLVTLLSAEPEIQYIALRNINLITQKLPNMLSDKINMFFCKYNEPAY 335
Query: 795 VKLEKLDIMIRLASQANIAQVNYVVQE 821
VK+EKLDI+IRL S N+ V Y ++E
Sbjct: 336 VKMEKLDIIIRLVSDKNVDLVLYELKE 362
Score = 435 (158.2 bits), Expect = 4.2e-68, Sum P(2) = 4.2e-68
Identities = 82/128 (64%), Positives = 107/128 (83%)
Query: 278 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYV 337
+F+ + KKL+P LVTLLS+EPE+QY+ALRNINLI QK P++L ++ +FF KYN+P YV
Sbjct: 277 EFIKNVHKKLSPSLVTLLSAEPEIQYIALRNINLITQKLPNMLSDKINMFFCKYNEPAYV 336
Query: 338 KLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 397
K+EKLDI+IRL S N+ VL ELKEY+TEVDV+FV+K+VRAIG CAIK+ QS+E+C++
Sbjct: 337 KMEKLDIIIRLVSDKNVDLVLYELKEYSTEVDVEFVKKSVRAIGSCAIKLPQSSEKCINI 396
Query: 398 LLDLIQTK 405
LLDLI TK
Sbjct: 397 LLDLIDTK 404
Score = 339 (124.4 bits), Expect = 4.2e-68, Sum P(2) = 4.2e-68
Identities = 61/89 (68%), Positives = 76/89 (85%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V F KD D NPLIRALA+RTMGCIR+++ITEYL EPLR+CLKDEDPYVRKTA +C+A
Sbjct: 87 AVNTFRKDSSDPNPLIRALAIRTMGCIRLEQITEYLIEPLRRCLKDEDPYVRKTAVICIA 146
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KLYDI+ +LVE++GF+D L D+L D+N M
Sbjct: 147 KLYDISPKLVEEEGFIDTLLDILDDNNAM 175
Score = 320 (117.7 bits), Expect = 3.3e-50, Sum P(2) = 3.3e-50
Identities = 108/353 (30%), Positives = 180/353 (50%)
Query: 552 VKDC-EDSNPLIRALAVRTMGCIR--VDKITEY--LCEPLRKCLKDEDPYVRKTAAVCVA 606
++ C +D +P +R AV + + K+ E + L L D + V A + +
Sbjct: 126 LRRCLKDEDPYVRKTAVICIAKLYDISPKLVEEEGFIDTLLDILDDNNAMVVANAVISLT 185
Query: 607 KLYD-INAQLVEDQGFLDQ--LKDLLSDSNPMVVANAVAALSEM--NEASTSGVALIEMN 661
+ + N +++D D+ + LL+ N V V L + E TS A E
Sbjct: 186 DICENSNKSILKDVINKDENNVNKLLNAINECVEWGQVFILDALVLYEPKTSKDA--ERV 243
Query: 662 AQTINKLLTALNECTEWGQVFILDSLSNYSPKDDRE-AQSICERITPRLA---HANAAVV 717
+ I L+ N + ++ L +D+E +++ ++++P L A +
Sbjct: 244 LERILPRLSHANSAVVLSSIKVI--LCLLDKINDKEFIKNVHKKLSPSLVTLLSAEPEIQ 301
Query: 718 LSAVKVLMKLMEMLPGE-GDFVSTLTKKL-APPLVTLLSSEPEVQYVALRNINLIVQKRP 775
A++ + + + LP D ++ K P V + + ++ V+ +N++L++ +
Sbjct: 302 YIALRNINLITQKLPNMLSDKINMFFCKYNEPAYVKMEKLDIIIRLVSDKNVDLVLYELK 361
Query: 776 DILKHEMKVFFVKYN----DPIYVKL-EKLDIMIRLASQANIAQVNYVVQEAIVVIKDIF 830
+ E+ V FVK + +KL + + I + ++NYV+QE IVVIKDIF
Sbjct: 362 EY-STEVDVEFVKKSVRAIGSCAIKLPQSSEKCINILLDLIDTKINYVIQECIVVIKDIF 420
Query: 831 RKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFLE 883
RKYPNKYE+II+ LCENL++LDE A+AS+IWIIGEY ERIDNADEL++SFLE
Sbjct: 421 RKYPNKYESIITILCENLESLDESNAKASLIWIIGEYVERIDNADELIDSFLE 473
Score = 291 (107.5 bits), Expect = 4.8e-63, Sum P(2) = 4.8e-63
Identities = 70/144 (48%), Positives = 90/144 (62%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
M+D +YF TTKKGEI ELK EL+S IA+MTVGKDVS LF DVVNCMQT
Sbjct: 1 MSDLRYFQTTKKGEIHELKEELHSSHKEKKKEAIKKIIAAMTVGKDVSTLFSDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQKSSSSFQCMID---IRSIPLFDLCSS 117
N+ELKKLVYLY++NYAK P++AI+A +TF +K SS +I IR++ L
Sbjct: 61 SNIELKKLVYLYVINYAKVQPELAILAVNTF--RKDSSDPNPLIRALAIRTMGCIRLEQI 118
Query: 118 VGVFVKD---C-EDSNPLIRALAV 137
++ C +D +P +R AV
Sbjct: 119 TEYLIEPLRRCLKDEDPYVRKTAV 142
Score = 277 (102.6 bits), Expect = 7.7e-51, Sum P(2) = 7.7e-51
Identities = 76/203 (37%), Positives = 114/203 (56%)
Query: 289 PPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYN----DPIYVKL----E 340
P V + + ++ V+ +N++L++ + + E+ V FVK + +KL E
Sbjct: 333 PAYVKMEKLDIIIRLVSDKNVDLVLYELKEY-STEVDVEFVKKSVRAIGSCAIKLPQSSE 391
Query: 341 K-LDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLL 399
K ++I++ L I V+ E ++ + K I +E E L
Sbjct: 392 KCINILLDLID-TKINYVIQECIVVIKDIFRKYPNKYESIITILCENLESLDESNAKASL 450
Query: 400 DLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLS 459
I +Y ERIDNADEL++SFLE F DE VQLQ+LTA VKLFLK +T++++ +VL
Sbjct: 451 IWIIGEYVERIDNADELIDSFLENFSDEPYNVQLQILTASVKLFLKCSKNTKDIITKVLK 510
Query: 460 LATQDSDNPDLRDRGFIYWRLLS 482
L+T++SDNPDLRDR +IYWRLLS
Sbjct: 511 LSTEESDNPDLRDRAYIYWRLLS 533
Score = 50 (22.7 bits), Expect = 9.4e-22, Sum P(2) = 9.4e-22
Identities = 43/195 (22%), Positives = 83/195 (42%)
Query: 283 LTKKLAPPLVTLLSSE-PEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEK 341
+T+ L PL L E P V+ A+ I + P +++ E F+ D + L+
Sbjct: 118 ITEYLIEPLRRCLKDEDPYVRKTAVICIAKLYDISPKLVEEEG---FI---DTLLDILDD 171
Query: 342 LDIMIRLASQANIAQVLSELKEYATE-VDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLD 400
+ M+ AN L+++ E + + + D + K + + + + E +LD
Sbjct: 172 NNAMV----VANAVISLTDICENSNKSILKDVINKDENNVNKLLNAINECVEWGQVFILD 227
Query: 401 LIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQEL--VQQVL 458
+ + +A+ +LE L N+ V L + I+ L L + D + + V + L
Sbjct: 228 ALVLYEPKTSKDAERVLERILPRLSHANSAVVLSSIKVILCL-LDKINDKEFIKNVHKKL 286
Query: 459 S--LATQDSDNPDLR 471
S L T S P+++
Sbjct: 287 SPSLVTLLSAEPEIQ 301
>ASPGD|ASPL0000034670 [details] [associations]
symbol:AN3029 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602
PIRSF:PIRSF002291 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 GO:GO:0008565
EMBL:BN001306 EMBL:AACD01000051 eggNOG:COG5096 HOGENOM:HOG000163270
PANTHER:PTHR11134 OMA:KECENAD OrthoDB:EOG49GPQW RefSeq:XP_660633.1
ProteinModelPortal:Q5B8V1 SMR:Q5B8V1 STRING:Q5B8V1
EnsemblFungi:CADANIAT00010050 GeneID:2873851 KEGG:ani:AN3029.2
Uniprot:Q5B8V1
Length = 766
Score = 990 (353.6 bits), Expect = 9.1e-100, P = 9.1e-100
Identities = 201/359 (55%), Positives = 264/359 (73%)
Query: 498 IASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCED 557
I +MT+GKDVSALFPDV+ + T +LE KKLVYLYLMNYAKSHPD+ I+AVNTFV+D ED
Sbjct: 41 IMAMTLGKDVSALFPDVLKNIATSDLEQKKLVYLYLMNYAKSHPDLCILAVNTFVQDSED 100
Query: 558 SNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVE 617
NPLIRALA+RTMGCIRVDK+ +Y+ EPLRK L+DE PYVRKTAA+CVAKL+D+ +
Sbjct: 101 PNPLIRALAIRTMGCIRVDKMIDYMEEPLRKTLRDESPYVRKTAAICVAKLFDLGPAMCL 160
Query: 618 DQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTE 677
+ GFL+ L++++ D NPMVVAN+V ALSE++ A+ AL ++ T+ KLL ALNECTE
Sbjct: 161 ENGFLEMLQEMIGDPNPMVVANSVTALSEIHHAAPETQAL-QVTPNTLRKLLMALNECTE 219
Query: 678 WGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDF 737
WG+V IL +LS Y EA+ ICER+ P+ HAN +VVL+AVK + M+++ E
Sbjct: 220 WGRVTILTTLSEYRTSAVNEAEQICERVAPQFQHANPSVVLAAVKTVFLHMKIINAE--L 277
Query: 738 VSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKL 797
KK+APPLVTL+SS PEVQYVALRNI+L++QK+PDIL E++VFF KYNDP YVK
Sbjct: 278 SKNYLKKMAPPLVTLVSSAPEVQYVALRNIDLLLQKQPDILNKELRVFFCKYNDPPYVKF 337
Query: 798 EKLDIMIRLASQANIAQVNYVVQE-AIVVIKDIFRKYPNKYETI---ISTLCEN-LDTL 851
+KL+IM+R+A+ N Q+ ++E A+ V D R+ + I + CE ++TL
Sbjct: 338 QKLEIMVRIANDRNFDQLLAELREYALEVDMDFVRRAVKAIGQVAIKIESACEKCVNTL 396
Score = 628 (226.1 bits), Expect = 7.4e-80, Sum P(2) = 7.4e-80
Identities = 166/417 (39%), Positives = 233/417 (55%)
Query: 7 FTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELK 66
F +KGE FEL+ L S I +MT+GKDVSALFPDV+ + T +LE K
Sbjct: 10 FAVPRKGETFELRAGLVSQYAYERKEAIQKTIMAMTLGKDVSALFPDVLKNIATSDLEQK 69
Query: 67 KLVYLYLMNYAKSHPDMAIMAFSTFFYQKSSSSFQCMIDIRSIPLFDL-CSSVGVFVKDC 125
KLVYLYLMNYAKSHPD+ I+A +TF Q S IR++ + + C V +
Sbjct: 70 KLVYLYLMNYAKSHPDLCILAVNTFV-QDSEDPNPL---IRALAIRTMGCIRVDKMIDYM 125
Query: 126 EDSNPLIRALA-----VRTMGCIRVDKITEY---LC------EPLRKCLKDEDPYVRKTA 171
E+ PL + L VR I V K+ + +C E L++ + D +P V +
Sbjct: 126 EE--PLRKTLRDESPYVRKTAAICVAKLFDLGPAMCLENGFLEMLQEMIGDPNPMVVANS 183
Query: 172 AVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMXXXXXXXXXXXXPRKSYWQRNLSSRK 231
+++++ + Q + L+ LL N S ++ + +
Sbjct: 184 VTALSEIHHAAPETQALQVTPNTLRKLLMALNECTEWGRVTILTTL---SEYRTSAVNEA 240
Query: 232 KQICWNL-PYLM--NLSVIYPAWPLSTINPHTPXXXXXXXXXXXXPGEGDFVSTLTKKLA 288
+QIC + P N SV+ A + T+ H + KK+A
Sbjct: 241 EQICERVAPQFQHANPSVVLAA--VKTVFLHMKII------------NAELSKNYLKKMA 286
Query: 289 PPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRL 348
PPLVTL+SS PEVQYVALRNI+L++QK+PDIL E++VFF KYNDP YVK +KL+IM+R+
Sbjct: 287 PPLVTLVSSAPEVQYVALRNIDLLLQKQPDILNKELRVFFCKYNDPPYVKFQKLEIMVRI 346
Query: 349 ASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK 405
A+ N Q+L+EL+EYA EVD+DFVR+AV+AIG+ AIK+E + E+CV+TLLDLI TK
Sbjct: 347 ANDRNFDQLLAELREYALEVDMDFVRRAVKAIGQVAIKIESACEKCVNTLLDLINTK 403
Score = 267 (99.0 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 99/347 (28%), Positives = 157/347 (45%)
Query: 553 KDCEDSNPLIRALAVRTMGCI-RVDKITEYLC------EPLRKCLKDEDPYVRKTAAVCV 605
K D +P +R A C+ ++ + +C E L++ + D +P V + +
Sbjct: 131 KTLRDESPYVRKTAAI---CVAKLFDLGPAMCLENGFLEMLQEMIGDPNPMVVANSVTAL 187
Query: 606 AKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTI 665
++++ + Q + L+ LL N V L+ ++E TS V E + +
Sbjct: 188 SEIHHAAPETQALQVTPNTLRKLLMALNECTEWGRVTILTTLSEYRTSAVNEAEQICERV 247
Query: 666 NKLLTALNECTEWGQV---FILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVK 722
N V F+ + N + + +T L + V A++
Sbjct: 248 APQFQHANPSVVLAAVKTVFLHMKIINAELSKNYLKKMAPPLVT--LVSSAPEVQYVALR 305
Query: 723 VLMKLMEMLPG--EGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNIN-LIVQKRPDILK 779
+ L++ P + K PP V E V+ RN + L+ + R L+
Sbjct: 306 NIDLLLQKQPDILNKELRVFFCKYNDPPYVKFQKLEIMVRIANDRNFDQLLAELREYALE 365
Query: 780 HEMKVF--FVKYNDPIYVKLEKL-DIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNK 836
+M VK + +K+E + + +VNYVVQEAIVVIKDIFRKYP
Sbjct: 366 VDMDFVRRAVKAIGQVAIKIESACEKCVNTLLDLINTKVNYVVQEAIVVIKDIFRKYPG- 424
Query: 837 YETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFLE 883
YE II TLC+ +D LDEP ARA++IWI+GEYAE+I NA ++L F+E
Sbjct: 425 YEGIIPTLCKCIDELDEPNARAALIWIVGEYAEKISNAGDILAGFVE 471
Score = 193 (73.0 bits), Expect = 7.4e-80, Sum P(2) = 7.4e-80
Identities = 36/53 (67%), Positives = 44/53 (83%)
Query: 430 QVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQDSDNPDLRDRGFIYWRLLS 482
Q QLQ+LTA+VKLFLKRP Q LVQ+VL AT ++DNPD+RDR ++YWRLLS
Sbjct: 498 QTQLQILTAVVKLFLKRPDKAQGLVQKVLQAATAENDNPDVRDRAYVYWRLLS 550
Score = 79 (32.9 bits), Expect = 2.1e-14, Sum P(2) = 2.1e-14
Identities = 40/153 (26%), Positives = 69/153 (45%)
Query: 289 PPLVTLLSSEPEVQYVALRNIN-LIVQKRPDILKHEMKVF--FVKYNDPIYVKLEKL-DI 344
PP V E V+ RN + L+ + R L+ +M VK + +K+E +
Sbjct: 332 PPYVKFQKLEIMVRIANDRNFDQLLAELREYALEVDMDFVRRAVKAIGQVAIKIESACEK 391
Query: 345 MIRLASQANIAQVLSELKEYATEVDVDFVRK------AVRAIGRCAIKVEQSAERCVSTL 398
+ +V ++E A V D RK + + +C ++++ R
Sbjct: 392 CVNTLLDLINTKVNYVVQE-AIVVIKDIFRKYPGYEGIIPTLCKCIDELDEPNARAA--- 447
Query: 399 LDLIQTKYAERIDNADELLESFLEGFHDENTQV 431
L I +YAE+I NA ++L F+EGF++E +QV
Sbjct: 448 LIWIVGEYAEKISNAGDILAGFVEGFNEEFSQV 480
>UNIPROTKB|K7EJT8 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013037 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF02883
Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM00809 SMART:SM01020
InterPro:IPR013041 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:2.60.40.1150 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 SUPFAM:SSF55711
SUPFAM:SSF49348 EMBL:AC006237 HGNC:HGNC:563 EMBL:AC015911
EMBL:AC004134 Ensembl:ENST00000592545 Uniprot:K7EJT8
Length = 913
Score = 949 (339.1 bits), Expect = 2.0e-95, P = 2.0e-95
Identities = 190/244 (77%), Positives = 217/244 (88%)
Query: 590 LKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNE 649
+KDEDPYVRKTAAVCVAKL+DINAQ+VEDQGFLD L+DL++DSNPMVVANAVAALSE++E
Sbjct: 92 VKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISE 151
Query: 650 ASTSGVALIEMNAQTINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRL 709
+ + L+++N Q INKLLTALNECTEWGQ+FILD LSNY+PKDDREAQSICER+TPRL
Sbjct: 152 SHPNS-NLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSICERVTPRL 210
Query: 710 AHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINL 769
+HAN+AVVLSAVKVLMK +E+LP + D+ + L KKLAPPLVTLLS EPEVQYVALRNINL
Sbjct: 211 SHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINL 270
Query: 770 IVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQE-AIVVIKD 828
IVQKRP+ILK E+KVFFVKYNDPIYVKLEKLDIMIRLASQANIAQV ++E A V D
Sbjct: 271 IVQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVD 330
Query: 829 IFRK 832
RK
Sbjct: 331 FVRK 334
Score = 594 (214.2 bits), Expect = 5.4e-91, Sum P(3) = 5.4e-91
Identities = 140/261 (53%), Positives = 170/261 (65%)
Query: 274 PGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYND 333
P + D+ + L KKLAPPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYND
Sbjct: 233 PKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYND 292
Query: 334 PIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 393
PIYVKLEKLDIMIRLASQANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER
Sbjct: 293 PIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 352
Query: 394 CVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQEL 453
CVSTLLDLIQTK + A ++ + ++ + L + L P D +
Sbjct: 353 CVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSL--DEP-DARAA 409
Query: 454 VQQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPD 513
+ ++ + DN D F+ +T L LT +V + + L
Sbjct: 410 MIWIVGEYAERIDNADELLESFLEG--FHDESTQVQLTLLTAIVKLFLKKPSETQELVQQ 467
Query: 514 VVNC--MQTDNLELKKLVYLY 532
V++ +DN +L+ Y+Y
Sbjct: 468 VLSLATQDSDNPDLRDRGYIY 488
Score = 371 (135.7 bits), Expect = 4.0e-63, Sum P(3) = 4.0e-63
Identities = 72/79 (91%), Positives = 78/79 (98%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAERIDNADELLESFLEGFHDE+TQVQL LLTAIVKLFLK+P++TQELVQQVLSLATQD
Sbjct: 416 EYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQD 475
Query: 465 SDNPDLRDRGFIYWRLLST 483
SDNPDLRDRG+IYWRLLST
Sbjct: 476 SDNPDLRDRGYIYWRLLST 494
Score = 358 (131.1 bits), Expect = 5.4e-91, Sum P(3) = 5.4e-91
Identities = 81/148 (54%), Positives = 99/148 (66%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTT KKGEIFELK ELN++ IA+MTVGKDVS+LFPDVVNCMQT
Sbjct: 1 MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTFF-----YQKSSSSFQCMIDIRSIPLFDLC 115
DNLELKKLVYLYLMNYAKS PDMAIMA ++F Y + +++ C+ + I +
Sbjct: 61 DNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDEDPYVRKTAAV-CVAKLHDINA-QMV 118
Query: 116 SSVGVF--VKDC-EDSNPLIRALAVRTM 140
G ++D DSNP++ A AV +
Sbjct: 119 EDQGFLDSLRDLIADSNPMVVANAVAAL 146
Score = 212 (79.7 bits), Expect = 1.1e-75, Sum P(3) = 1.1e-75
Identities = 39/46 (84%), Positives = 45/46 (97%)
Query: 160 LKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
+KDEDPYVRKTAAVCVAKL+DINAQ+VEDQGFLD L+DL++DSNPM
Sbjct: 92 VKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPM 137
Score = 63 (27.2 bits), Expect = 1.7e-30, Sum P(2) = 1.7e-30
Identities = 62/295 (21%), Positives = 119/295 (40%)
Query: 560 PLIRALAVRTMGCIRVDKITEYLCEPLRKC-LKDEDP-YVRKTAAVCVAKLYDINAQLVE 617
P ++ +A+R + I V K E L + ++ +K DP YV+ + +L A + +
Sbjct: 258 PEVQYVALRNINLI-VQKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLAS-QANIAQ 315
Query: 618 DQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLL-TALNECT 676
L +LK+ ++ + V AV A+ + E T+ L+ T +N
Sbjct: 316 ---VLAELKEYATEVDVDFVRKAVRAIGR---CAIKVEQSAERCVSTLLDLIQTKVNYVV 369
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPR-LAHANAAVV------LSAVKVLMKLME 729
+ V I D Y K + ++CE + A AA++ + +L+E
Sbjct: 370 QEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDNADELLE 429
Query: 730 -MLPGEGDFVSTLTKKLAPPLVTLLSSEP-EVQYVALRNINLIVQK--RPDILKHEMKVF 785
L G D + + L +V L +P E Q + + ++L Q PD+ +
Sbjct: 430 SFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQDSDNPDLRDRGYIYW 489
Query: 786 FVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVI---KDIFRKYPNKY 837
+ DP+ K L ++ + ++ + ++ E I I ++ K PN +
Sbjct: 490 RLLSTDPVTAKEVVLSEKPLISEETDLIEPT-LLDELICHIGSLASVYHKPPNAF 543
Score = 48 (22.0 bits), Expect = 5.4e-91, Sum P(3) = 5.4e-91
Identities = 28/123 (22%), Positives = 51/123 (41%)
Query: 748 PLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLA 807
PL TL P ++ L N+ + V+ D+ + N ++V+ K++ + LA
Sbjct: 763 PLNTL---GPVMKMEPLNNLQVAVKNNIDVFYFSC---LIPLN-VLFVEDGKMERQVFLA 815
Query: 808 SQANIAQVN---YVVQEAIVVIKDIFRKYPNK-YETIISTLCENLDTLDEPEARASMIWI 863
+ +I N + ++E + + K N TI E D L + + IWI
Sbjct: 816 TWKDIPNENELQFQIKECHLNADTVSSKLQNNNVYTIAKRNVEGQDMLYQSLKLTNGIWI 875
Query: 864 IGE 866
+ E
Sbjct: 876 LAE 878
>POMBASE|SPBC947.02 [details] [associations]
symbol:apl2 "AP-1 adaptor complex subunit beta subunit
Apl2" species:4896 "Schizosaccharomyces pombe" [GO:0005768
"endosome" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005905 "coated pit" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IC] [GO:0006995 "cellular response to
nitrogen starvation" evidence=IMP] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IMP] [GO:0016197 "endosomal transport" evidence=IMP]
[GO:0030121 "AP-1 adaptor complex" evidence=IDA] [GO:0030276
"clathrin binding" evidence=IC] [GO:0070317 "negative regulation of
G0 to G1 transition" evidence=IMP] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 PIRSF:PIRSF002291 PomBase:SPBC947.02 GO:GO:0005886
GO:GO:0006886 SUPFAM:SSF48371 GO:GO:0070317 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 GO:GO:0005768
EMBL:CU329671 GO:GO:0005905 GenomeReviews:CU329671_GR GO:GO:0016197
GO:GO:0030121 GO:GO:0030276 eggNOG:COG5096 HOGENOM:HOG000163270
PANTHER:PTHR11134 PIR:T40780 RefSeq:NP_595274.1
ProteinModelPortal:O43079 STRING:O43079 EnsemblFungi:SPBC947.02.1
GeneID:2541255 KEGG:spo:SPBC947.02 OMA:KECENAD OrthoDB:EOG49GPQW
NextBio:20802367 GO:GO:0006995 Uniprot:O43079
Length = 683
Score = 934 (333.8 bits), Expect = 7.8e-94, P = 7.8e-94
Identities = 196/401 (48%), Positives = 272/401 (67%)
Query: 488 YILLHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMA 547
Y + + IA+MTVGKDVS+LFPDV+ + T ++ LKKLVYLYL+NYAK+HPD+ I+A
Sbjct: 32 YERIDAVKRTIAAMTVGKDVSSLFPDVLKNLATRDITLKKLVYLYLINYAKTHPDLCILA 91
Query: 548 VNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAK 607
VNTFVKD E+ NP +RALA+RTMGCIRV+KI YL +PLRK LKDE PYVRK AAVCV K
Sbjct: 92 VNTFVKDSEEYNPTLRALAIRTMGCIRVNKIIGYLADPLRKALKDEHPYVRKAAAVCVVK 151
Query: 608 LYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINK 667
+YD++ + GF++QL+ L+SD NP+VVANAV +L+E+++ + T ++
Sbjct: 152 MYDLDREYCASNGFIEQLQALVSDPNPVVVANAVRSLAEIHDQDPEKGYFNVVYTMT-DR 210
Query: 668 LLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKL 727
L+ AL+EC EWG++ IL+SL+ + D +EA+ +CER+ P+ HAN+ VVLSAVKV+M
Sbjct: 211 LMVALSECNEWGRITILNSLARFRTSDIKEAEYVCERVVPQFQHANSGVVLSAVKVIMVH 270
Query: 728 MEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFV 787
+ + DF L KK+APPL+TLLS++ E+QYVALRNINLI+QKRP I + +VFF
Sbjct: 271 IPLF--SSDFTDFLYKKMAPPLLTLLSTDSEIQYVALRNINLILQKRPSIFDVKTRVFFC 328
Query: 788 KYNDPIYVKLEKLDIMIRLASQANI--------AQVNYV----VQEAIVVIKDIFRKYPN 835
KYNDP+Y+K+EKL I+ LA NI A V+ V V++ I + D+ K P+
Sbjct: 329 KYNDPLYIKMEKLKIITMLACDENINETISELRAYVSEVELEFVKQTIKCLGDVALKVPS 388
Query: 836 KYETIISTLCE----NLDTLDEPEARASMIWIIGEYAERID 872
IS E N+ + + E M ++ +Y ++ID
Sbjct: 389 VINDCISIFLEIYELNISYMVQ-EVTVVMETVLRKYPQKID 428
Score = 355 (130.0 bits), Expect = 7.9e-56, Sum P(2) = 7.9e-56
Identities = 67/164 (40%), Positives = 108/164 (65%)
Query: 278 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYV 337
DF L KK+APPL+TLLS++ E+QYVALRNINLI+QKRP I + +VFF KYNDP+Y+
Sbjct: 277 DFTDFLYKKMAPPLLTLLSTDSEIQYVALRNINLILQKRPSIFDVKTRVFFCKYNDPLYI 336
Query: 338 KLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 397
K+EKL I+ LA NI + +SEL+ Y +EV+++FV++ ++ +G A+KV C+S
Sbjct: 337 KMEKLKIITMLACDENINETISELRAYVSEVELEFVKQTIKCLGDVALKVPSVINDCISI 396
Query: 398 LLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVK 441
L++ + + + ++E+ L + + + L L+ +++
Sbjct: 397 FLEIYELNISYMVQEVTVVMETVLRKY-PQKIDLLLPYLSRVIE 439
Score = 301 (111.0 bits), Expect = 7.9e-56, Sum P(2) = 7.9e-56
Identities = 57/94 (60%), Positives = 72/94 (76%)
Query: 113 DLCS-SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTA 171
DLC +V FVKD E+ NP +RALA+RTMGCIRV+KI YL +PLRK LKDE PYVRK A
Sbjct: 86 DLCILAVNTFVKDSEEYNPTLRALAIRTMGCIRVNKIIGYLADPLRKALKDEHPYVRKAA 145
Query: 172 AVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
AVCV K+YD++ + GF++QL+ L+SD NP+
Sbjct: 146 AVCVVKMYDLDREYCASNGFIEQLQALVSDPNPV 179
Score = 235 (87.8 bits), Expect = 7.0e-49, Sum P(2) = 7.0e-49
Identities = 68/190 (35%), Positives = 99/190 (52%)
Query: 4 SKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNL 63
S F KK E EL+ L S IA+MTVGKDVS+LFPDV+ + T ++
Sbjct: 8 SSRFKAFKKSETSELQKGLVSQYAYERIDAVKRTIAAMTVGKDVSSLFPDVLKNLATRDI 67
Query: 64 ELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQKSSSSFQCMID---IRSIPLFDLCSSVGV 120
LKKLVYLYL+NYAK+HPD+ I+A +TF K S + + IR++ + +G
Sbjct: 68 TLKKLVYLYLINYAKTHPDLCILAVNTFV--KDSEEYNPTLRALAIRTMGCIRVNKIIGY 125
Query: 121 FV----KDCEDSNPLIR-ALAVRTMGCIRVDKITEYLC-----EPLRKCLKDEDPYVRKT 170
K +D +P +R A AV + +D+ EY E L+ + D +P V
Sbjct: 126 LADPLRKALKDEHPYVRKAAAVCVVKMYDLDR--EYCASNGFIEQLQALVSDPNPVVVAN 183
Query: 171 AAVCVAKLYD 180
A +A+++D
Sbjct: 184 AVRSLAEIHD 193
Score = 167 (63.8 bits), Expect = 1.2e-35, Sum P(2) = 1.2e-35
Identities = 49/157 (31%), Positives = 82/157 (52%)
Query: 332 NDPIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDV--DFVRKAVRAIGRCAIKVEQ 389
ND I + LE ++ I Q + + L++Y ++D+ ++ + + +G +
Sbjct: 391 NDCISIFLEIYELNISYMVQEVTVVMETVLRKYPQKIDLLLPYLSRVIEELG------DP 444
Query: 390 SAERCVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPT- 448
A ++ +L +++ I + +LL + DE+ Q+QL LLTA+VKL L
Sbjct: 445 RARSSMAWILG----EFSHVIPTSSKLLSEMISTMADEDLQIQLALLTAVVKLSLMNGKG 500
Query: 449 DTQELVQQVLSLATQDSDNPDLRDRGFIYWRLLSTGN 485
+ +ELVQ+VL+ A S N DLRDR F Y RLL+ N
Sbjct: 501 NDEELVQKVLNYAINQSSNQDLRDRAFAYQRLLTPEN 537
Score = 144 (55.7 bits), Expect = 3.1e-33, Sum P(2) = 3.1e-33
Identities = 25/68 (36%), Positives = 44/68 (64%)
Query: 815 VNYVVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNA 874
++Y+VQE VV++ + RKYP K + ++ L ++ L +P AR+SM WI+GE++ I +
Sbjct: 405 ISYMVQEVTVVMETVLRKYPQKIDLLLPYLSRVIEELGDPRARSSMAWILGEFSHVIPTS 464
Query: 875 DELLESFL 882
+LL +
Sbjct: 465 SKLLSEMI 472
>CGD|CAL0003949 [details] [associations]
symbol:APL2 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005768 "endosome"
evidence=IEA] [GO:0030121 "AP-1 adaptor complex" evidence=IEA]
[GO:0006896 "Golgi to vacuole transport" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA] [GO:0070317 "negative
regulation of G0 to G1 transition" evidence=IEA] [GO:0030276
"clathrin binding" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 PIRSF:PIRSF002291 CGD:CAL0003949 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 GO:GO:0035690 eggNOG:COG5096
PANTHER:PTHR11134 EMBL:AACQ01000027 RefSeq:XP_719930.1
ProteinModelPortal:Q5AEN7 STRING:Q5AEN7 GeneID:3638343
KEGG:cal:CaO19.231 Uniprot:Q5AEN7
Length = 774
Score = 927 (331.4 bits), Expect = 4.3e-93, P = 4.3e-93
Identities = 180/319 (56%), Positives = 246/319 (77%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VI +MTVGKDVS+LFPDV+ + T +LE KKLVYLYLMNYAK++P++ I+AVNTFV+D E
Sbjct: 58 VIQAMTVGKDVSSLFPDVLKNIATYDLEQKKLVYLYLMNYAKTNPELCILAVNTFVQDTE 117
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALA+RTMGCIRV K+ EYL PL++ L DE+PYVRKTAA+CVAKL+D+N ++
Sbjct: 118 DPNPLIRALAIRTMGCIRVAKMVEYLEIPLQRTLADENPYVRKTAAICVAKLFDLNPEMC 177
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTS-GVALIEMNAQTINKLLTALNEC 675
+ GFLD+LK LLSD NPMVVANA+ ALSE+ + +T+ + ++ N + IN LL LNEC
Sbjct: 178 VEFGFLDELKKLLSDPNPMVVANAINALSEIRDMNTNENLEILAFNREVINSLLLCLNEC 237
Query: 676 TEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEG 735
TEWG++ IL++L+ Y + EA I R+ P+L H N +VVLS++K ++ + +P
Sbjct: 238 TEWGRITILNTLAEYDTDNSEEANHIMGRVIPQLQHVNPSVVLSSIKAILHHLNAIPVTA 297
Query: 736 DFVSTLTKKLAPPLVTLLSSE-PEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIY 794
S + KKL+ PLV+L+S+ PE QYV L+NI +I++K P++L E++VFF+KY+DP+Y
Sbjct: 298 QR-SNILKKLSAPLVSLVSTSIPEAQYVGLKNIRIILEKYPNVLSKELRVFFIKYSDPLY 356
Query: 795 VKLEKLDIMIRLASQANIA 813
+KLEKL+IMIRLAS+ N A
Sbjct: 357 LKLEKLEIMIRLASEQNSA 375
Score = 339 (124.4 bits), Expect = 4.7e-55, Sum P(3) = 4.7e-55
Identities = 69/150 (46%), Positives = 107/150 (71%)
Query: 281 STLTKKLAPPLVTLLSSE-PEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKL 339
S + KKL+ PLV+L+S+ PE QYV L+NI +I++K P++L E++VFF+KY+DP+Y+KL
Sbjct: 300 SNILKKLSAPLVSLVSTSIPEAQYVGLKNIRIILEKYPNVLSKELRVFFIKYSDPLYLKL 359
Query: 340 EKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLL 399
EKL+IMIRLAS+ N A +L ELKEYA E + V KA+++IG AIK+++SA + ++ L
Sbjct: 360 EKLEIMIRLASEQNSALLLGELKEYAMEFEPALVTKAIKSIGSVAIKLQESAVKAINLLH 419
Query: 400 DLIQTKYAERIDNAD-ELLESFLEGFHDEN 428
++I + + I N +L + L + +N
Sbjct: 420 EIIDERGGDLIINESVTVLVNILRRYPGKN 449
Score = 313 (115.2 bits), Expect = 4.7e-55, Sum P(3) = 4.7e-55
Identities = 61/94 (64%), Positives = 76/94 (80%)
Query: 113 DLCS-SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTA 171
+LC +V FV+D ED NPLIRALA+RTMGCIRV K+ EYL PL++ L DE+PYVRKTA
Sbjct: 103 ELCILAVNTFVQDTEDPNPLIRALAIRTMGCIRVAKMVEYLEIPLQRTLADENPYVRKTA 162
Query: 172 AVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
A+CVAKL+D+N ++ + GFLD+LK LLSD NPM
Sbjct: 163 AICVAKLFDLNPEMCVEFGFLDELKKLLSDPNPM 196
Score = 250 (93.1 bits), Expect = 1.8e-48, Sum P(3) = 1.8e-48
Identities = 66/187 (35%), Positives = 98/187 (52%)
Query: 5 KYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLE 64
KY KKGE FELK L S I +MTVGKDVS+LFPDV+ + T +LE
Sbjct: 26 KYLVGPKKGETFELKNGLVSQYKHERKDAIQRVIQAMTVGKDVSSLFPDVLKNIATYDLE 85
Query: 65 LKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRSIPLFDLCSSVGVFV- 122
KKLVYLYLMNYAK++P++ I+A +TF + + + IR++ + V
Sbjct: 86 QKKLVYLYLMNYAKTNPELCILAVNTFVQDTEDPNPLIRALAIRTMGCIRVAKMVEYLEI 145
Query: 123 ---KDCEDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTAAVCV 175
+ D NP +R A+ V + + + E+ + L+K L D +P V A +
Sbjct: 146 PLQRTLADENPYVRKTAAICVAKLFDLNPEMCVEFGFLDELKKLLSDPNPMVVANAINAL 205
Query: 176 AKLYDIN 182
+++ D+N
Sbjct: 206 SEIRDMN 212
Score = 140 (54.3 bits), Expect = 4.5e-34, Sum P(3) = 4.5e-34
Identities = 30/89 (33%), Positives = 58/89 (65%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTD-----TQ--ELVQQV 457
+Y + + L ++GF ++++ +QL +L+ IVK+ L+ ++ +Q L+Q+V
Sbjct: 481 EYPKYFSGLHKKLSDLVDGFLEDDSVLQLNILSTIVKINLELSSNGGSGNSQYSNLLQKV 540
Query: 458 LSLATQDSDNPDLRDRGFIYWRLLSTGNT 486
L LAT++ +N D+RD+ +IYWRLLS+ ++
Sbjct: 541 LELATKECENADVRDKAYIYWRLLSSSSS 569
Score = 105 (42.0 bits), Expect = 3.1e-30, Sum P(2) = 3.1e-30
Identities = 67/346 (19%), Positives = 148/346 (42%)
Query: 564 ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTAAVCVAKLYDINA-QLVEDQGF 621
A+ V + + + E+ + L+K L D +P V A ++++ D+N + +E F
Sbjct: 163 AICVAKLFDLNPEMCVEFGFLDELKKLLSDPNPMVVANAINALSEIRDMNTNENLEILAF 222
Query: 622 -LDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTEWGQ 680
+ + LL N + L+ + E T + L +N
Sbjct: 223 NREVINSLLLCLNECTEWGRITILNTLAEYDTDNSEEANHIMGRVIPQLQHVNPSVVLSS 282
Query: 681 V-FILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVS 739
+ IL L N P + + +I ++++ L + + A V +K + ++ + + +
Sbjct: 283 IKAILHHL-NAIPVTAQRS-NILKKLSAPLVSLVSTSIPEAQYVGLKNIRIILEK--YPN 338
Query: 740 TLTKKLAPPLVTLLSS-EPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLE 798
L+K+L + +++ + + I L ++ +L E+K + +++ + K
Sbjct: 339 VLSKELRVFFIKYSDPLYLKLEKLEIM-IRLASEQNSALLLGELKEYAMEFEPALVTKAI 397
Query: 799 KL--DIMIRLASQANIAQVNY------------VVQEAIVVIKDIFRKYPNKYET---II 841
K + I+L A + +N ++ E++ V+ +I R+YP K + II
Sbjct: 398 KSIGSVAIKLQESA-VKAINLLHEIIDERGGDLIINESVTVLVNILRRYPGKNDLATLII 456
Query: 842 STLCENLDTLDEPEARASMIWIIGEYAERIDNA----DELLESFLE 883
+ +++ L++ EA + IW++GEY + +L++ FLE
Sbjct: 457 PVISNHVNELNKTEALSGYIWLLGEYPKYFSGLHKKLSDLVDGFLE 502
Score = 46 (21.3 bits), Expect = 4.7e-55, Sum P(3) = 4.7e-55
Identities = 15/69 (21%), Positives = 32/69 (46%)
Query: 622 LDQLKDLLSDSNPMVVANAVAALSEM--NEASTSGVALIEMNAQTINKLLTALNECTEWG 679
LD+L DL S P +++ + S++ + ST+ + + T T + T+
Sbjct: 683 LDELNDLFSTPPPPPSSSSQNSQSQIAGGQTSTNDILSLFDTINTTTTTTTTPQQSTQSS 742
Query: 680 QVFILDSLS 688
+ +++LS
Sbjct: 743 TTYGIENLS 751
>UNIPROTKB|Q5AEN7 [details] [associations]
symbol:APL2 "Potential clathrin-associated protein AP-1
complex component" species:237561 "Candida albicans SC5314"
[GO:0035690 "cellular response to drug" evidence=IMP]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 PIRSF:PIRSF002291 CGD:CAL0003949
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 GO:GO:0035690
eggNOG:COG5096 PANTHER:PTHR11134 EMBL:AACQ01000027
RefSeq:XP_719930.1 ProteinModelPortal:Q5AEN7 STRING:Q5AEN7
GeneID:3638343 KEGG:cal:CaO19.231 Uniprot:Q5AEN7
Length = 774
Score = 927 (331.4 bits), Expect = 4.3e-93, P = 4.3e-93
Identities = 180/319 (56%), Positives = 246/319 (77%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VI +MTVGKDVS+LFPDV+ + T +LE KKLVYLYLMNYAK++P++ I+AVNTFV+D E
Sbjct: 58 VIQAMTVGKDVSSLFPDVLKNIATYDLEQKKLVYLYLMNYAKTNPELCILAVNTFVQDTE 117
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALA+RTMGCIRV K+ EYL PL++ L DE+PYVRKTAA+CVAKL+D+N ++
Sbjct: 118 DPNPLIRALAIRTMGCIRVAKMVEYLEIPLQRTLADENPYVRKTAAICVAKLFDLNPEMC 177
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTS-GVALIEMNAQTINKLLTALNEC 675
+ GFLD+LK LLSD NPMVVANA+ ALSE+ + +T+ + ++ N + IN LL LNEC
Sbjct: 178 VEFGFLDELKKLLSDPNPMVVANAINALSEIRDMNTNENLEILAFNREVINSLLLCLNEC 237
Query: 676 TEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEG 735
TEWG++ IL++L+ Y + EA I R+ P+L H N +VVLS++K ++ + +P
Sbjct: 238 TEWGRITILNTLAEYDTDNSEEANHIMGRVIPQLQHVNPSVVLSSIKAILHHLNAIPVTA 297
Query: 736 DFVSTLTKKLAPPLVTLLSSE-PEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIY 794
S + KKL+ PLV+L+S+ PE QYV L+NI +I++K P++L E++VFF+KY+DP+Y
Sbjct: 298 QR-SNILKKLSAPLVSLVSTSIPEAQYVGLKNIRIILEKYPNVLSKELRVFFIKYSDPLY 356
Query: 795 VKLEKLDIMIRLASQANIA 813
+KLEKL+IMIRLAS+ N A
Sbjct: 357 LKLEKLEIMIRLASEQNSA 375
Score = 339 (124.4 bits), Expect = 4.7e-55, Sum P(3) = 4.7e-55
Identities = 69/150 (46%), Positives = 107/150 (71%)
Query: 281 STLTKKLAPPLVTLLSSE-PEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKL 339
S + KKL+ PLV+L+S+ PE QYV L+NI +I++K P++L E++VFF+KY+DP+Y+KL
Sbjct: 300 SNILKKLSAPLVSLVSTSIPEAQYVGLKNIRIILEKYPNVLSKELRVFFIKYSDPLYLKL 359
Query: 340 EKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLL 399
EKL+IMIRLAS+ N A +L ELKEYA E + V KA+++IG AIK+++SA + ++ L
Sbjct: 360 EKLEIMIRLASEQNSALLLGELKEYAMEFEPALVTKAIKSIGSVAIKLQESAVKAINLLH 419
Query: 400 DLIQTKYAERIDNAD-ELLESFLEGFHDEN 428
++I + + I N +L + L + +N
Sbjct: 420 EIIDERGGDLIINESVTVLVNILRRYPGKN 449
Score = 313 (115.2 bits), Expect = 4.7e-55, Sum P(3) = 4.7e-55
Identities = 61/94 (64%), Positives = 76/94 (80%)
Query: 113 DLCS-SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTA 171
+LC +V FV+D ED NPLIRALA+RTMGCIRV K+ EYL PL++ L DE+PYVRKTA
Sbjct: 103 ELCILAVNTFVQDTEDPNPLIRALAIRTMGCIRVAKMVEYLEIPLQRTLADENPYVRKTA 162
Query: 172 AVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
A+CVAKL+D+N ++ + GFLD+LK LLSD NPM
Sbjct: 163 AICVAKLFDLNPEMCVEFGFLDELKKLLSDPNPM 196
Score = 250 (93.1 bits), Expect = 1.8e-48, Sum P(3) = 1.8e-48
Identities = 66/187 (35%), Positives = 98/187 (52%)
Query: 5 KYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLE 64
KY KKGE FELK L S I +MTVGKDVS+LFPDV+ + T +LE
Sbjct: 26 KYLVGPKKGETFELKNGLVSQYKHERKDAIQRVIQAMTVGKDVSSLFPDVLKNIATYDLE 85
Query: 65 LKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRSIPLFDLCSSVGVFV- 122
KKLVYLYLMNYAK++P++ I+A +TF + + + IR++ + V
Sbjct: 86 QKKLVYLYLMNYAKTNPELCILAVNTFVQDTEDPNPLIRALAIRTMGCIRVAKMVEYLEI 145
Query: 123 ---KDCEDSNPLIR---ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTAAVCV 175
+ D NP +R A+ V + + + E+ + L+K L D +P V A +
Sbjct: 146 PLQRTLADENPYVRKTAAICVAKLFDLNPEMCVEFGFLDELKKLLSDPNPMVVANAINAL 205
Query: 176 AKLYDIN 182
+++ D+N
Sbjct: 206 SEIRDMN 212
Score = 140 (54.3 bits), Expect = 4.5e-34, Sum P(3) = 4.5e-34
Identities = 30/89 (33%), Positives = 58/89 (65%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTD-----TQ--ELVQQV 457
+Y + + L ++GF ++++ +QL +L+ IVK+ L+ ++ +Q L+Q+V
Sbjct: 481 EYPKYFSGLHKKLSDLVDGFLEDDSVLQLNILSTIVKINLELSSNGGSGNSQYSNLLQKV 540
Query: 458 LSLATQDSDNPDLRDRGFIYWRLLSTGNT 486
L LAT++ +N D+RD+ +IYWRLLS+ ++
Sbjct: 541 LELATKECENADVRDKAYIYWRLLSSSSS 569
Score = 105 (42.0 bits), Expect = 3.1e-30, Sum P(2) = 3.1e-30
Identities = 67/346 (19%), Positives = 148/346 (42%)
Query: 564 ALAVRTMGCIRVDKITEY-LCEPLRKCLKDEDPYVRKTAAVCVAKLYDINA-QLVEDQGF 621
A+ V + + + E+ + L+K L D +P V A ++++ D+N + +E F
Sbjct: 163 AICVAKLFDLNPEMCVEFGFLDELKKLLSDPNPMVVANAINALSEIRDMNTNENLEILAF 222
Query: 622 -LDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTEWGQ 680
+ + LL N + L+ + E T + L +N
Sbjct: 223 NREVINSLLLCLNECTEWGRITILNTLAEYDTDNSEEANHIMGRVIPQLQHVNPSVVLSS 282
Query: 681 V-FILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVS 739
+ IL L N P + + +I ++++ L + + A V +K + ++ + + +
Sbjct: 283 IKAILHHL-NAIPVTAQRS-NILKKLSAPLVSLVSTSIPEAQYVGLKNIRIILEK--YPN 338
Query: 740 TLTKKLAPPLVTLLSS-EPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLE 798
L+K+L + +++ + + I L ++ +L E+K + +++ + K
Sbjct: 339 VLSKELRVFFIKYSDPLYLKLEKLEIM-IRLASEQNSALLLGELKEYAMEFEPALVTKAI 397
Query: 799 KL--DIMIRLASQANIAQVNY------------VVQEAIVVIKDIFRKYPNKYET---II 841
K + I+L A + +N ++ E++ V+ +I R+YP K + II
Sbjct: 398 KSIGSVAIKLQESA-VKAINLLHEIIDERGGDLIINESVTVLVNILRRYPGKNDLATLII 456
Query: 842 STLCENLDTLDEPEARASMIWIIGEYAERIDNA----DELLESFLE 883
+ +++ L++ EA + IW++GEY + +L++ FLE
Sbjct: 457 PVISNHVNELNKTEALSGYIWLLGEYPKYFSGLHKKLSDLVDGFLE 502
Score = 46 (21.3 bits), Expect = 4.7e-55, Sum P(3) = 4.7e-55
Identities = 15/69 (21%), Positives = 32/69 (46%)
Query: 622 LDQLKDLLSDSNPMVVANAVAALSEM--NEASTSGVALIEMNAQTINKLLTALNECTEWG 679
LD+L DL S P +++ + S++ + ST+ + + T T + T+
Sbjct: 683 LDELNDLFSTPPPPPSSSSQNSQSQIAGGQTSTNDILSLFDTINTTTTTTTTPQQSTQSS 742
Query: 680 QVFILDSLS 688
+ +++LS
Sbjct: 743 TTYGIENLS 751
>SGD|S000001618 [details] [associations]
symbol:APL2 "Beta-adaptin subunit of the clathrin-associated
protein (AP-1) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0016192 "vesicle-mediated transport" evidence=IEA;ISS;IPI]
[GO:0030276 "clathrin binding" evidence=ISS;IPI] [GO:0030121 "AP-1
adaptor complex" evidence=ISS;IPI] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0006896
"Golgi to vacuole transport" evidence=IMP] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005905 "coated pit" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 PIRSF:PIRSF002291 SGD:S000001618 GO:GO:0005886
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 GO:GO:0005905 EMBL:BK006944 GO:GO:0030121
GO:GO:0030276 eggNOG:COG5096 HOGENOM:HOG000163270 PANTHER:PTHR11134
GeneTree:ENSGT00530000063138 OrthoDB:EOG49GPQW EMBL:Z30212
EMBL:Z28135 PIR:S37964 RefSeq:NP_012787.1 ProteinModelPortal:P36000
SMR:P36000 DIP:DIP-1199N IntAct:P36000 MINT:MINT-404361
STRING:P36000 PaxDb:P36000 PeptideAtlas:P36000 PRIDE:P36000
EnsemblFungi:YKL135C GeneID:853723 KEGG:sce:YKL135C CYGD:YKL135c
OMA:YDISATM NextBio:974749 Genevestigator:P36000 GermOnline:YKL135C
GO:GO:0006896 Uniprot:P36000
Length = 726
Score = 850 (304.3 bits), Expect = 6.2e-85, P = 6.2e-85
Identities = 167/365 (45%), Positives = 248/365 (67%)
Query: 498 IASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCED 557
I MT+GKDVS+LFPDV+ + T ++E KKLVYLY+MNYA++HP++ I+AVNTF+ D +D
Sbjct: 51 IQQMTLGKDVSSLFPDVLKNIATIDVEQKKLVYLYVMNYAETHPELCILAVNTFITDAQD 110
Query: 558 SNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVE 617
NPLIR +A+RTM IRVDKI EY+ PLR+ L D++ YVRKTA +CVAKL+ +N L
Sbjct: 111 PNPLIRCMAIRTMSMIRVDKILEYIETPLRRTLHDDNAYVRKTAVICVAKLFQLNKDLCV 170
Query: 618 DQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTE 677
+ G ++ L + L DSNP+V+ANA AAL E++ V L + +++ L ALNECTE
Sbjct: 171 ELGVVEDLVNALDDSNPLVIANATAALIEIHNMDMDAVDLSSLIQSHVSQFLLALNECTE 230
Query: 678 WGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDF 737
W ++ IL +LS YS KD EAQ I +R+T L H N AVVL+ +KV+++ + + +
Sbjct: 231 WARIIILGTLSEYSAKDSLEAQDIIDRVTAHLQHVNPAVVLATIKVIVRNLPQIEYSSN- 289
Query: 738 VSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKL 797
S + K+L+ V+L+S+ PE+QYVAL+NI +I++K P++L E+++F+VK+NDP+YVKL
Sbjct: 290 -SLIMKRLSSAFVSLMSTPPEMQYVALKNIRIILEKYPELLTKELRIFYVKFNDPLYVKL 348
Query: 798 EKLDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYET-IISTLCENLDTLDEPEA 856
EK+DI++RL +N+ Q ++ E ++Y +YE +S + L L A
Sbjct: 349 EKIDILVRLVDPSNLKQCTLLLTE--------LKEYAMEYEPEFVSRAIQALSQLGIKYA 400
Query: 857 RASMI 861
+ S +
Sbjct: 401 QESFV 405
Score = 305 (112.4 bits), Expect = 4.9e-53, Sum P(3) = 4.9e-53
Identities = 61/134 (45%), Positives = 98/134 (73%)
Query: 281 STLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLE 340
S + K+L+ V+L+S+ PE+QYVAL+NI +I++K P++L E+++F+VK+NDP+YVKLE
Sbjct: 290 SLIMKRLSSAFVSLMSTPPEMQYVALKNIRIILEKYPELLTKELRIFYVKFNDPLYVKLE 349
Query: 341 KLDIMIRLASQANIAQ---VLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVST 397
K+DI++RL +N+ Q +L+ELKEYA E + +FV +A++A+ + IK Q E VS
Sbjct: 350 KIDILVRLVDPSNLKQCTLLLTELKEYAMEYEPEFVSRAIQALSQLGIKYAQ--ESFVSK 407
Query: 398 LLDLIQTKYAERID 411
+LD++ + ER D
Sbjct: 408 VLDIL-LELLERQD 420
Score = 252 (93.8 bits), Expect = 4.9e-53, Sum P(3) = 4.9e-53
Identities = 48/94 (51%), Positives = 66/94 (70%)
Query: 113 DLCS-SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTA 171
+LC +V F+ D +D NPLIR +A+RTM IRVDKI EY+ PLR+ L D++ YVRKTA
Sbjct: 95 ELCILAVNTFITDAQDPNPLIRCMAIRTMSMIRVDKILEYIETPLRRTLHDDNAYVRKTA 154
Query: 172 AVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
+CVAKL+ +N L + G ++ L + L DSNP+
Sbjct: 155 VICVAKLFQLNKDLCVELGVVEDLVNALDDSNPL 188
Score = 215 (80.7 bits), Expect = 3.6e-49, Sum P(3) = 3.6e-49
Identities = 60/190 (31%), Positives = 101/190 (53%)
Query: 12 KGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYL 71
KGE+ EL+ L S I MT+GKDVS+LFPDV+ + T ++E KKLVYL
Sbjct: 25 KGELSELRTGLVSQYPQTRKDAIKKTIQQMTLGKDVSSLFPDVLKNIATIDVEQKKLVYL 84
Query: 72 YLMNYAKSHPDMAIMAFSTFFY--QKSSSSFQCMIDIRSIPLFDLCSSVGVFV-----KD 124
Y+MNYA++HP++ I+A +TF Q + +CM IR++ + + + ++ +
Sbjct: 85 YVMNYAETHPELCILAVNTFITDAQDPNPLIRCMA-IRTMSMIRV-DKILEYIETPLRRT 142
Query: 125 CEDSNPLIRALAVRTMGCI-RVDKITEYLC------EPLRKCLKDEDPYVRKTAAVCVAK 177
D N +R AV C+ ++ ++ + LC E L L D +P V A + +
Sbjct: 143 LHDDNAYVRKTAVI---CVAKLFQLNKDLCVELGVVEDLVNALDDSNPLVIANATAALIE 199
Query: 178 LYDINAQLVE 187
+++++ V+
Sbjct: 200 IHNMDMDAVD 209
Score = 123 (48.4 bits), Expect = 4.9e-53, Sum P(3) = 4.9e-53
Identities = 33/103 (32%), Positives = 51/103 (49%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
++ + + + F+E F E Q+ LL IV+L T T ++Q VL LATQ
Sbjct: 476 QHPNNFSDLESKINIFIENFVQEEALTQMSLLMTIVRL---HATLTGSMLQSVLELATQQ 532
Query: 465 SDNPDLRDRGFIYWRLLSTGNTFYILLHL--TRLVIASMTVGK 505
+ D+RD +YWR LS N ++ L +L + S T+ K
Sbjct: 533 THELDVRDMAMMYWRCLSMPNNESLVNDLCQNKLPMISNTLEK 575
Score = 68 (29.0 bits), Expect = 9.4e-20, Sum P(2) = 9.4e-20
Identities = 19/104 (18%), Positives = 46/104 (44%)
Query: 787 VKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETIISTLCE 846
+KY +V + LDI++ L + + + + + + D+ R P + + +C
Sbjct: 397 IKYAQESFVS-KVLDILLELLERQDT-----IKDDCCISLCDLLRHCPGN-DKMAKQVCA 449
Query: 847 NLDTLDEPE-------ARASMIWIIGEYAERIDNADELLESFLE 883
+T PE A+ + +W++G++ + + + F+E
Sbjct: 450 VFNTWSNPEVLLQSDIAKCNYVWLLGQHPNNFSDLESKINIFIE 493
>UNIPROTKB|G4NIQ6 [details] [associations]
symbol:MGG_04150 "AP-2 complex subunit beta" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602
PIRSF:PIRSF002291 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 GO:GO:0008565
PANTHER:PTHR11134 EMBL:CM001236 RefSeq:XP_003719679.1
EnsemblFungi:MGG_04150T0 GeneID:2677629 KEGG:mgr:MGG_04150
Uniprot:G4NIQ6
Length = 724
Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
Identities = 154/320 (48%), Positives = 229/320 (71%)
Query: 497 VIASMTVGK-DVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDC 555
++A+MT+ D+ ALFPDV+ CM ++LE+KK+ +L+L+NYA+ P++AI A+ D
Sbjct: 44 IVANMTMSNNDMVALFPDVIGCMHIESLEIKKMCFLFLVNYARMRPEIAIKAIPVLEYDM 103
Query: 556 EDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQL 615
DSNPL+RALA+RTM I V + E +++ LKD DPYVRKTAA CVAKLYD + Q+
Sbjct: 104 RDSNPLVRALALRTMSYIHVREFVEATVPIVKQMLKDSDPYVRKTAAFCVAKLYDHDKQM 163
Query: 616 VEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNEC 675
VE +D+L LL D NP VVA+A+A+L ++ E S + I+ +K++ L +C
Sbjct: 164 VEQSDLIDRLNGLLRDDNPTVVASALASLMDIWERSDAIKLTIDYG--NASKMVAILPDC 221
Query: 676 TEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEG 735
+EWGQ +IL++L +Y P D EA + ERI PRL+H+N+AVVL+ ++V++ LM + +
Sbjct: 222 SEWGQTYILEALMSYLPVDSGEALLLAERIAPRLSHSNSAVVLTCIRVILYLMNYISDQK 281
Query: 736 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYV 795
+S L +KL+PPLVTLL+ PEVQY+ALRN LI+Q+RP++L+++++VFF KYNDPIYV
Sbjct: 282 Q-ISALCRKLSPPLVTLLAKGPEVQYLALRNALLILQRRPEVLRNDIRVFFCKYNDPIYV 340
Query: 796 KLEKLDIMIRLASQANIAQV 815
K+ KL+++ LA++ NI +V
Sbjct: 341 KVTKLELIFMLANERNIDEV 360
Score = 441 (160.3 bits), Expect = 1.3e-57, Sum P(2) = 1.3e-57
Identities = 103/256 (40%), Positives = 156/256 (60%)
Query: 280 VSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKL 339
+S L +KL+PPLVTLL+ PEVQY+ALRN LI+Q+RP++L+++++VFF KYNDPIYVK+
Sbjct: 283 ISALCRKLSPPLVTLLAKGPEVQYLALRNALLILQRRPEVLRNDIRVFFCKYNDPIYVKV 342
Query: 340 EKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLL 399
KL+++ LA++ NI +VL+EL+EYATE+DV FVRKAVRAIG+ AIK+E +A RC+ LL
Sbjct: 343 TKLELIFMLANERNIDEVLTELREYATEIDVHFVRKAVRAIGKLAIKIEPAAPRCIDLLL 402
Query: 400 DLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLS 459
+L+ TK + A ++ + + ++ + L + L P +V +
Sbjct: 403 ELVATKVTYIVQEATVVIRNIFRKYPNQYESIIGTLCEHLDSL--DEPEAKAAMVWVIGQ 460
Query: 460 LATQDSDNPDLRDRGFIYWRLLSTGNTFYILLHLT-RLVIASMTVGKDVSALFPDVVNCM 518
A++ +N D F+Y LL T +L I T G++ L P V+
Sbjct: 461 YASR-IENSDALLEDFLYSFADEPVEVQLALLTATVKLFIQRPTKGQE---LVPKVLKWA 516
Query: 519 --QTDNLELKKLVYLY 532
+TDN +L+ Y+Y
Sbjct: 517 TEETDNPDLRDRAYMY 532
Score = 329 (120.9 bits), Expect = 3.4e-26, P = 3.4e-26
Identities = 114/383 (29%), Positives = 191/383 (49%)
Query: 521 DNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDC-EDSNPLIRALAVRTMGCIRV-DK- 577
D+ L + + L M+Y H + A VK +DS+P +R A + + DK
Sbjct: 105 DSNPLVRALALRTMSYI--HVREFVEATVPIVKQMLKDSDPYVRKTAAFCVAKLYDHDKQ 162
Query: 578 ITEY--LCEPLRKCLKDEDPYVRKTAAVCVAKLYDIN--AQLVEDQGFLDQLKDLLSDSN 633
+ E L + L L+D++P V +A + +++ + +L D G ++ +L D +
Sbjct: 163 MVEQSDLIDRLNGLLRDDNPTVVASALASLMDIWERSDAIKLTIDYGNASKMVAILPDCS 222
Query: 634 PMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTEWGQVFILDSLSNYSPK 693
+ AL SG AL+ A+ I L+ N + ++ L NY
Sbjct: 223 EWGQTYILEALMSYLPVD-SGEALLL--AERIAPRLSHSNSAVVLTCIRVILYLMNYI-S 278
Query: 694 DDREAQSICERITPRLAHANAA---VVLSAVKVLMKLMEMLPG--EGDFVSTLTKKLAPP 748
D ++ ++C +++P L A V A++ + +++ P D K P
Sbjct: 279 DQKQISALCRKLSPPLVTLLAKGPEVQYLALRNALLILQRRPEVLRNDIRVFFCKYNDPI 338
Query: 749 LVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYN----DPIYVKLEK----- 799
V + E RNI+ ++ + + E+ V FV+ + +K+E
Sbjct: 339 YVKVTKLELIFMLANERNIDEVLTELREYAT-EIDVHFVRKAVRAIGKLAIKIEPAAPRC 397
Query: 800 LDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARAS 859
+D+++ L + +V Y+VQEA VVI++IFRKYPN+YE+II TLCE+LD+LDEPEA+A+
Sbjct: 398 IDLLLELVA----TKVTYIVQEATVVIRNIFRKYPNQYESIIGTLCEHLDSLDEPEAKAA 453
Query: 860 MIWIIGEYAERIDNADELLESFL 882
M+W+IG+YA RI+N+D LLE FL
Sbjct: 454 MVWVIGQYASRIENSDALLEDFL 476
Score = 264 (98.0 bits), Expect = 1.7e-37, Sum P(2) = 1.7e-37
Identities = 57/142 (40%), Positives = 84/142 (59%)
Query: 342 LDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDL 401
+D+++ L + + ++ E + + + IG ++ E +
Sbjct: 398 IDLLLELVA-TKVTYIVQEATVVIRNIFRKYPNQYESIIGTLCEHLDSLDEPEAKAAMVW 456
Query: 402 IQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLA 461
+ +YA RI+N+D LLE FL F DE +VQL LLTA VKLF++RPT QELV +VL A
Sbjct: 457 VIGQYASRIENSDALLEDFLYSFADEPVEVQLALLTATVKLFIQRPTKGQELVPKVLKWA 516
Query: 462 TQDSDNPDLRDRGFIYWRLLST 483
T+++DNPDLRDR ++YWRLLST
Sbjct: 517 TEETDNPDLRDRAYMYWRLLST 538
Score = 225 (84.3 bits), Expect = 1.3e-57, Sum P(2) = 1.3e-57
Identities = 46/88 (52%), Positives = 58/88 (65%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
++ V D DSNPL+RALA+RTM I V + E +++ LKD DPYVRKTAA CVA
Sbjct: 95 AIPVLEYDMRDSNPLVRALALRTMSYIHVREFVEATVPIVKQMLKDSDPYVRKTAAFCVA 154
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNP 204
KLYD + Q+VE +D+L LL D NP
Sbjct: 155 KLYDHDKQMVEQSDLIDRLNGLLRDDNP 182
Score = 186 (70.5 bits), Expect = 1.7e-53, Sum P(2) = 1.7e-53
Identities = 64/216 (29%), Positives = 110/216 (50%)
Query: 3 DSKYFTTTKKGEIFELKGELNS----DXXXXXXXXXXXXI-ASMTVGK-DVSALFPDVVN 56
DSK F +G++ EL+ ELNS D I A+MT+ D+ ALFPDV+
Sbjct: 8 DSKLFA---RGKVAELRLELNSGGKKDKNFTAKKIALKKIVANMTMSNNDMVALFPDVIG 64
Query: 57 CMQTDNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRS---IPLF 112
CM ++LE+KK+ +L+L+NYA+ P++AI A Y + S+ + +R+ I +
Sbjct: 65 CMHIESLEIKKMCFLFLVNYARMRPEIAIKAIPVLEYDMRDSNPLVRALALRTMSYIHVR 124
Query: 113 DLCSSVGVFVKDC-EDSNPLIRALAVRTMGCIRV-DK-ITEY--LCEPLRKCLKDEDPYV 167
+ + VK +DS+P +R A + + DK + E L + L L+D++P V
Sbjct: 125 EFVEATVPIVKQMLKDSDPYVRKTAAFCVAKLYDHDKQMVEQSDLIDRLNGLLRDDNPTV 184
Query: 168 RKTAAVCVAKLYDIN--AQLVEDQGFLDQLKDLLSD 201
+A + +++ + +L D G ++ +L D
Sbjct: 185 VASALASLMDIWERSDAIKLTIDYGNASKMVAILPD 220
Score = 37 (18.1 bits), Expect = 7.5e-38, Sum P(2) = 7.5e-38
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 69 VYLYLMNYAKSHPDMAIM 86
V LYLMNY ++ +
Sbjct: 269 VILYLMNYISDQKQISAL 286
>ASPGD|ASPL0000003399 [details] [associations]
symbol:AN5950 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0044732 "mitotic spindle
pole body" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 PIRSF:PIRSF002291 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192
GO:GO:0008565 EMBL:BN001301 PANTHER:PTHR11134 OMA:VLKWATE
ProteinModelPortal:C8V3G8 EnsemblFungi:CADANIAT00007077
Uniprot:C8V3G8
Length = 717
Score = 761 (272.9 bits), Expect = 1.7e-75, P = 1.7e-75
Identities = 147/320 (45%), Positives = 232/320 (72%)
Query: 497 VIASMTVGK-DVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDC 555
++A+MT+ D+ ALFPDV++CM +LE+KK+ +L+L+NY++ PD+A+ A+ + D
Sbjct: 43 IVANMTMSNNDMIALFPDVIDCMNLPSLEIKKMCFLFLVNYSRMKPDIALKALPILINDM 102
Query: 556 EDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQL 615
E +NPL+RALA+RT+ I V + E +PL++ + D DPYVRKTAA CVAKLY+ + ++
Sbjct: 103 EATNPLVRALALRTIAYIHVREYVEATVQPLKRLMGDMDPYVRKTAAFCVAKLYEHDRKM 162
Query: 616 VEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNEC 675
VE +D+L +L D NP VV++ +A+L ++ S + ++L ++ + +KL++ L +C
Sbjct: 163 VEASDLIDRLNAMLKDENPTVVSSVLASLVDIWGRSET-ISLT-IDYASASKLVSILPDC 220
Query: 676 TEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEG 735
+EWGQ +IL++L +Y P+D EA + ERI PRL+H N+AVVL++++V++ LM + E
Sbjct: 221 SEWGQSYILEALMSYVPQDSAEALLLAERIAPRLSHQNSAVVLTSIRVILYLMNYIAEER 280
Query: 736 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYV 795
S L+KKL+PPLVTLLS PEVQY+ LRN LI+QKRP++L+++++VFF YNDPIYV
Sbjct: 281 HLTS-LSKKLSPPLVTLLSKPPEVQYLVLRNAILILQKRPEVLRNDIRVFFCNYNDPIYV 339
Query: 796 KLEKLDIMIRLASQANIAQV 815
K+ KL+++ L ++ NI+ V
Sbjct: 340 KVTKLELIFMLTTKENISVV 359
Score = 424 (154.3 bits), Expect = 2.8e-54, Sum P(2) = 2.8e-54
Identities = 103/274 (37%), Positives = 163/274 (59%)
Query: 280 VSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKL 339
+++L+KKL+PPLVTLLS PEVQY+ LRN LI+QKRP++L+++++VFF YNDPIYVK+
Sbjct: 282 LTSLSKKLSPPLVTLLSKPPEVQYLVLRNAILILQKRPEVLRNDIRVFFCNYNDPIYVKV 341
Query: 340 EKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLL 399
KL+++ L ++ NI+ VL+EL+EYATE+DV FVRKAVRAIG+ AIK+E +A++C+ LL
Sbjct: 342 TKLELIFMLTTKENISVVLAELREYATEIDVHFVRKAVRAIGKLAIKIESAAKQCIDCLL 401
Query: 400 DLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLS 459
DL+ K + A ++ + + ++ + Q++ I L D E V+
Sbjct: 402 DLVNAKIPYIVQEATVVIRNIFRKYPNQYESIIGQVIQNIDDL------DEPEAKAAVIW 455
Query: 460 LATQDSDNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIA-SMTVGKDVSA--LFPDVVN 516
+ Q +D + + + L+T + I + L+ L + + + A L P V+
Sbjct: 456 IIGQYADR--IENSADLLQDYLATFHDETIEVQLSLLTATVKLFIQRPTKAQQLVPQVLK 513
Query: 517 -CMQ-TDNLELKKLVYLYLMNYAKSHPDMAIMAV 548
C + TD+ +L+ Y+Y S P A V
Sbjct: 514 WCTEETDDPDLRDRGYMY-WRLLSSDPTTARQVV 546
Score = 291 (107.5 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 110/401 (27%), Positives = 192/401 (47%)
Query: 512 PDVVNCMQTDN-----LELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRALA 566
P ++N M+ N L L+ + Y+++ Y ++ V + D +P +R A
Sbjct: 96 PILINDMEATNPLVRALALRTIAYIHVREYVEA-------TVQPLKRLMGDMDPYVRKTA 148
Query: 567 VRTMGCI-RVD-KITEY--LCEPLRKCLKDEDPYVRKTAAVCVAKLYDI-----NAQLVE 617
+ + D K+ E L + L LKDE+P V ++V +A L DI L
Sbjct: 149 AFCVAKLYEHDRKMVEASDLIDRLNAMLKDENPTV--VSSV-LASLVDIWGRSETISLTI 205
Query: 618 DQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTE 677
D +L +L D + + + AL ++ L+ A+ I L+ N
Sbjct: 206 DYASASKLVSILPDCSEWGQSYILEALMSYVPQDSAEALLL---AERIAPRLSHQNSAVV 262
Query: 678 WGQVFILDSLSNYSPKDDREAQSICERITPRLA-------HANAAVVLSAVKVLMKLMEM 730
+ ++ L NY ++R S+ ++++P L V+ +A+ +L K E+
Sbjct: 263 LTSIRVILYLMNYIA-EERHLTSLSKKLSPPLVTLLSKPPEVQYLVLRNAILILQKRPEV 321
Query: 731 LPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYN 790
L D P V + E NI++++ + + E+ V FV+
Sbjct: 322 L--RNDIRVFFCNYNDPIYVKVTKLELIFMLTTKENISVVLAELREYAT-EIDVHFVRKA 378
Query: 791 ----DPIYVKLEK-----LDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETII 841
+ +K+E +D ++ L + A++ Y+VQEA VVI++IFRKYPN+YE+II
Sbjct: 379 VRAIGKLAIKIESAAKQCIDCLLDLVN----AKIPYIVQEATVVIRNIFRKYPNQYESII 434
Query: 842 STLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFL 882
+ +N+D LDEPEA+A++IWIIG+YA+RI+N+ +LL+ +L
Sbjct: 435 GQVIQNIDDLDEPEAKAAVIWIIGQYADRIENSADLLQDYL 475
Score = 212 (79.7 bits), Expect = 2.8e-54, Sum P(2) = 2.8e-54
Identities = 40/85 (47%), Positives = 58/85 (68%)
Query: 120 VFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLY 179
+ + D E +NPL+RALA+RT+ I V + E +PL++ + D DPYVRKTAA CVAKLY
Sbjct: 97 ILINDMEATNPLVRALALRTIAYIHVREYVEATVQPLKRLMGDMDPYVRKTAAFCVAKLY 156
Query: 180 DINAQLVEDQGFLDQLKDLLSDSNP 204
+ + ++VE +D+L +L D NP
Sbjct: 157 EHDRKMVEASDLIDRLNAMLKDENP 181
Score = 171 (65.3 bits), Expect = 5.8e-50, Sum P(2) = 5.8e-50
Identities = 60/194 (30%), Positives = 100/194 (51%)
Query: 3 DSKYFTTTKKGEIFELKGELNS----DXXXXXXXXXXXXI-ASMTVGK-DVSALFPDVVN 56
D+K F +G++ EL+ ELNS D I A+MT+ D+ ALFPDV++
Sbjct: 7 DAKLFA---RGKVAELRQELNSGGKKDKNYSAKKIALKKIVANMTMSNNDMIALFPDVID 63
Query: 57 CMQTDNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRSIPLFDLC 115
CM +LE+KK+ +L+L+NY++ PD+A+ A ++++ + +R+I +
Sbjct: 64 CMNLPSLEIKKMCFLFLVNYSRMKPDIALKALPILINDMEATNPLVRALALRTIAYIHVR 123
Query: 116 SSVGVFVKDCE----DSNPLIRALAVRTMGCI-RVD-KITEY--LCEPLRKCLKDEDPYV 167
V V+ + D +P +R A + + D K+ E L + L LKDE+P V
Sbjct: 124 EYVEATVQPLKRLMGDMDPYVRKTAAFCVAKLYEHDRKMVEASDLIDRLNAMLKDENPTV 183
Query: 168 RKTAAVCVAKLYDI 181
++V +A L DI
Sbjct: 184 --VSSV-LASLVDI 194
>POMBASE|SPBC2G2.06c [details] [associations]
symbol:apl1 "AP-2 adaptor complex subunit Apl1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=ISO] [GO:0030122
"AP-2 adaptor complex" evidence=ISO] [GO:0044732 "mitotic spindle
pole body" evidence=IDA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602
PIRSF:PIRSF002291 PomBase:SPBC2G2.06c GO:GO:0005829 GO:GO:0005634
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0044732 GO:GO:0008565 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0030122 eggNOG:COG5096
HOGENOM:HOG000163270 PANTHER:PTHR11134 PIR:T40145
RefSeq:NP_596435.1 ProteinModelPortal:O43005 STRING:O43005
EnsemblFungi:SPBC2G2.06c.1 GeneID:2540375 KEGG:spo:SPBC2G2.06c
OMA:VLKWATE OrthoDB:EOG476P7N NextBio:20801503 Uniprot:O43005
Length = 677
Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
Identities = 144/337 (42%), Positives = 215/337 (63%)
Query: 498 IASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCED 557
IA ++ G D+S+LFP V++ M+++NLELKKL YLYL YA P A AV + D
Sbjct: 39 IAGISYGYDMSSLFPSVISSMESNNLELKKLCYLYLKIYASVKPTEAKRAVKLILNDIYS 98
Query: 558 SNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVE 617
SNP+IR+LA+RT+ + + +P+ + L D DPYVRKTAA+ +AKLY + ++VE
Sbjct: 99 SNPMIRSLALRTLTSVNIKNFWVAAMDPIVRLLDDTDPYVRKTAAIGIAKLYSYDKKMVE 158
Query: 618 DQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTE 677
G +D LK++LSD + +VVAN++AAL + +ST G L + + NKL+ +L +C+E
Sbjct: 159 SSGLIDHLKEMLSDESSVVVANSLAALMNIVNSST-GFKLT-FSREISNKLVKSLTDCSE 216
Query: 678 WGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDF 737
W QV ILD+L Y P+ EA+S ERI+P L H NAAV + AVKV++ L + +
Sbjct: 217 WLQVAILDALIFYVPQKPGEAESFAERISPWLQHGNAAVCMGAVKVILYLTNYMKDDNR- 275
Query: 738 VSTLTKKLAPPLVTLLSSEPEV-QYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
V K PPLVTLL+ + QYV LRNI +I+++ P++ +++ F+ ++DPIYVK
Sbjct: 276 VKEYFMKTQPPLVTLLARKSSATQYVILRNIQIILEQCPEMFANDIHFFYCNFDDPIYVK 335
Query: 797 LEKLDIMIRLASQANIAQV-NYVVQEAIVVIKDIFRK 832
LEKLDI+ ++A N+ Q+ V+ A + ++ RK
Sbjct: 336 LEKLDILTKIADIHNLDQILPEFVEYASEIDVELVRK 372
Score = 302 (111.4 bits), Expect = 2.1e-38, Sum P(2) = 2.1e-38
Identities = 59/140 (42%), Positives = 93/140 (66%)
Query: 286 KLAPPLVTLLSSEPEV-QYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDI 344
K PPLVTLL+ + QYV LRNI +I+++ P++ +++ F+ ++DPIYVKLEKLDI
Sbjct: 282 KTQPPLVTLLARKSSATQYVILRNIQIILEQCPEMFANDIHFFYCNFDDPIYVKLEKLDI 341
Query: 345 MIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQT 404
+ ++A N+ Q+L E EYA+E+DV+ VRK+V+ IG AIK+E+ C+ +L++L+ T
Sbjct: 342 LTKIADIHNLDQILPEFVEYASEIDVELVRKSVKCIGYLAIKIEERKNDCIDSLIELMNT 401
Query: 405 KYAERIDNADELLESFLEGF 424
K I A ++ L +
Sbjct: 402 KVTYVIQEAVIVIRDILRKY 421
Score = 254 (94.5 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 95/361 (26%), Positives = 179/361 (49%)
Query: 545 IMAVNTFVKDCEDSNPLIR-ALAVRTMGCIRVDK-ITEY--LCEPLRKCLKDEDPYVRKT 600
+ A++ V+ +D++P +R A+ DK + E L + L++ L DE V
Sbjct: 121 VAAMDPIVRLLDDTDPYVRKTAAIGIAKLYSYDKKMVESSGLIDHLKEMLSDESSVVVAN 180
Query: 601 AAVCVAKLYDINA--QLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALI 658
+ + + + + +L + ++L L+D + + + AL G A
Sbjct: 181 SLAALMNIVNSSTGFKLTFSREISNKLVKSLTDCSEWLQVAILDALI-FYVPQKPGEA-- 237
Query: 659 EMNAQTINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPR---LAHANAA 715
E A+ I+ L N G V ++ L+NY D+R + + P LA ++A
Sbjct: 238 ESFAERISPWLQHGNAAVCMGAVKVILYLTNYMKDDNRVKEYFMKTQPPLVTLLARKSSA 297
Query: 716 ---VVLSAVKVLMKLM-EMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVA-LRNINLI 770
V+L ++++++ EM + F P+ L + +A + N++ I
Sbjct: 298 TQYVILRNIQIILEQCPEMFANDIHFFYC---NFDDPIYVKLEKLDILTKIADIHNLDQI 354
Query: 771 VQKRPDILKH--EMKVFFVKYNDP----IYVKLE--KLDIMIRLASQANIAQVNYVVQEA 822
+ P+ +++ E+ V V+ + + +K+E K D + L N +V YV+QEA
Sbjct: 355 L---PEFVEYASEIDVELVRKSVKCIGYLAIKIEERKNDCIDSLIELMN-TKVTYVIQEA 410
Query: 823 IVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFL 882
++VI+DI RKYP Y++++ L ENLD+LDEP+A++++IWI+G+YAE I+++ LL +L
Sbjct: 411 VIVIRDILRKYPGSYKSLVPILYENLDSLDEPDAKSAVIWILGQYAEEIEDSITLLNDYL 470
Query: 883 E 883
+
Sbjct: 471 K 471
Score = 206 (77.6 bits), Expect = 9.0e-28, Sum P(2) = 9.0e-28
Identities = 39/78 (50%), Positives = 57/78 (73%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+YAE I+++ LL +L+GF DE ++QL LLTA++K+FLK+PT ++V VL T +
Sbjct: 454 QYAEEIEDSITLLNDYLKGFFDEPLEIQLTLLTAVIKVFLKKPTAAADMVTNVLQWCTDE 513
Query: 465 SDNPDLRDRGFIYWRLLS 482
++PDLRDRG IY R+LS
Sbjct: 514 VNDPDLRDRGIIYSRMLS 531
Score = 192 (72.6 bits), Expect = 2.1e-38, Sum P(2) = 2.1e-38
Identities = 36/87 (41%), Positives = 57/87 (65%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V + + D SNP+IR+LA+RT+ + + +P+ + L D DPYVRKTAA+ +A
Sbjct: 88 AVKLILNDIYSSNPMIRSLALRTLTSVNIKNFWVAAMDPIVRLLDDTDPYVRKTAAIGIA 147
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSN 203
KLY + ++VE G +D LK++LSD +
Sbjct: 148 KLYSYDKKMVESSGLIDHLKEMLSDES 174
Score = 139 (54.0 bits), Expect = 7.7e-33, Sum P(2) = 7.7e-33
Identities = 46/175 (26%), Positives = 81/175 (46%)
Query: 2 TDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTD 61
+ S +F++T + + IA ++ G D+S+LFP V++ M+++
Sbjct: 3 SSSSHFSSTAADLLAVFSSDNKDKSANKRISALKKAIAGISYGYDMSSLFPSVISSMESN 62
Query: 62 NLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQ-KSSSSFQCMIDIRSIPLFDL----CS 116
NLELKKL YLYL YA P A A SS+ + +R++ ++ +
Sbjct: 63 NLELKKLCYLYLKIYASVKPTEAKRAVKLILNDIYSSNPMIRSLALRTLTSVNIKNFWVA 122
Query: 117 SVGVFVKDCEDSNPLIR-ALAVRTMGCIRVDK-ITEY--LCEPLRKCLKDEDPYV 167
++ V+ +D++P +R A+ DK + E L + L++ L DE V
Sbjct: 123 AMDPIVRLLDDTDPYVRKTAAIGIAKLYSYDKKMVESSGLIDHLKEMLSDESSVV 177
Score = 48 (22.0 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 28/139 (20%), Positives = 58/139 (41%)
Query: 322 HEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIG 381
+ +K +F+K P+ L + + NI +L + E D+ F
Sbjct: 274 NRVKEYFMKTQPPLVTLLARKSSATQYVILRNIQIILEQCPEMFAN-DIHFFY--CNFDD 330
Query: 382 RCAIKVEQSAERCVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVK 441
+K+E+ LD++ TK A+ I N D++L F+E + + ++ + + I
Sbjct: 331 PIYVKLEK---------LDIL-TKIAD-IHNLDQILPEFVEYASEIDVELVRKSVKCIGY 379
Query: 442 LFLKRPTDTQELVQQVLSL 460
L +K + + ++ L
Sbjct: 380 LAIKIEERKNDCIDSLIEL 398
>UNIPROTKB|K7ERB2 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
Pfam:PF01602 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PANTHER:PTHR11134 EMBL:AC006237 HGNC:HGNC:563 EMBL:AC015911
EMBL:AC004134 Ensembl:ENST00000589774 Uniprot:K7ERB2
Length = 151
Score = 570 (205.7 bits), Expect = 6.5e-55, P = 6.5e-55
Identities = 109/115 (94%), Positives = 113/115 (98%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIA+MTVGKDVS+LFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVN+FVKDCE
Sbjct: 37 VIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCE 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDI 611
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DI
Sbjct: 97 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDI 151
Score = 348 (127.6 bits), Expect = 2.5e-61, Sum P(2) = 2.5e-61
Identities = 69/91 (75%), Positives = 75/91 (82%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTT KKGEIFELK ELN++ IA+MTVGKDVS+LFPDVVNCMQT
Sbjct: 1 MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTF 91
DNLELKKLVYLYLMNYAKS PDMAIMA ++F
Sbjct: 61 DNLELKKLVYLYLMNYAKSQPDMAIMAVNSF 91
Score = 317 (116.6 bits), Expect = 2.5e-61, Sum P(2) = 2.5e-61
Identities = 60/65 (92%), Positives = 62/65 (95%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA
Sbjct: 87 AVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 146
Query: 177 KLYDI 181
KL+DI
Sbjct: 147 KLHDI 151
>UNIPROTKB|K7EN71 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
Pfam:PF01602 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PANTHER:PTHR11134 EMBL:AC006237 HGNC:HGNC:563 EMBL:AC015911
EMBL:AC004134 Ensembl:ENST00000593014 Uniprot:K7EN71
Length = 132
Score = 476 (172.6 bits), Expect = 1.6e-44, P = 1.6e-44
Identities = 91/96 (94%), Positives = 94/96 (97%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIA+MTVGKDVS+LFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVN+FVKDCE
Sbjct: 37 VIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCE 96
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKD 592
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKD
Sbjct: 97 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKD 132
Score = 348 (127.6 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 69/91 (75%), Positives = 75/91 (82%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTT KKGEIFELK ELN++ IA+MTVGKDVS+LFPDVVNCMQT
Sbjct: 1 MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKSHPDMAIMAFSTF 91
DNLELKKLVYLYLMNYAKS PDMAIMA ++F
Sbjct: 61 DNLELKKLVYLYLMNYAKSQPDMAIMAVNSF 91
Score = 223 (83.6 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 42/46 (91%), Positives = 43/46 (93%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKD 162
+V FVKDCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKD
Sbjct: 87 AVNSFVKDCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKD 132
>DICTYBASE|DDB_G0283319 [details] [associations]
symbol:ap4b1 "adaptor-related protein complex 4, beta
1 subunit" species:44689 "Dictyostelium discoideum" [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0030659 "cytoplasmic vesicle membrane" evidence=IEA]
InterPro:IPR002553 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 dictyBase:DDB_G0283319
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GenomeReviews:CM000153_GR GO:GO:0016192 GO:GO:0008565 GO:GO:0030659
EMBL:AAFI02000052 eggNOG:COG5096 GO:GO:0030131 PANTHER:PTHR11134
RefSeq:XP_639163.1 ProteinModelPortal:Q54R84
EnsemblProtists:DDB0234245 GeneID:8624033 KEGG:ddi:DDB_G0283319
OMA:SEWAQCL Uniprot:Q54R84
Length = 838
Score = 523 (189.2 bits), Expect = 2.3e-51, Sum P(2) = 2.3e-51
Identities = 109/328 (33%), Positives = 193/328 (58%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
+I MT+G DVS LFPDV+ ++++ +KKLVYLY+++Y+KS+PD+ ++ VNT +DC
Sbjct: 50 IIYYMTIGMDVSVLFPDVIMVASSNDIIIKKLVYLYIVHYSKSNPDLLLLVVNTLRRDCI 109
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NP+IR LA+R++ + EY + + L D YVRKTA + +AKLY ++ +
Sbjct: 110 DRNPIIRGLALRSLCSLDSKNTLEYATIEINRSLTDFSGYVRKTALLGLAKLYHLSKEAF 169
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
+ + ++ D++ D +P V+ NAV+ L+E+ + L++ L+ E
Sbjct: 170 DLDIIIPKIFDMIMDQDPQVIVNAVSTLNEIKPGWSFTFDLVQ-------HLMIKFKEFN 222
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EW Q IL+ LS Y+P + E+ I + RL+H+N+A+ LS +K+ +K + +
Sbjct: 223 EWSQCIILECLSRYTPSSEDESLDILNLLDDRLSHSNSALTLSTIKIFLKYTDEFE---E 279
Query: 737 FVSTLTKKLAPPLVTLL-SSEP-EVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIY 794
+ +++ PL+TL+ SSE E + L +I+L++ + P + K F+ K++DP+Y
Sbjct: 280 IQEQVYERIKEPLITLMESSESNETSFTILHHIHLLMSRSPRLFNRYYKHFYCKFDDPLY 339
Query: 795 VKLEKLDIMIRLAS-QANIAQVNYVVQE 821
+K K+ ++ +AS Q I ++ ++QE
Sbjct: 340 IKTLKVQVLKEIASNQTFIESIDEILQE 367
Score = 157 (60.3 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 41/118 (34%), Positives = 64/118 (54%)
Query: 3 DSKYFTTTKKGEIFELKGEL----NSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCM 58
DS YF+ KK E+ +K L N I MT+G DVS LFPDV+
Sbjct: 13 DS-YFSEIKKSELGLIKNNLSTAINERNADKIKDILQRIIYYMTIGMDVSVLFPDVIMVA 71
Query: 59 QTDNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQKSSSSFQCMIDIRSIPLFDLCS 116
++++ +KKLVYLY+++Y+KS+PD+ ++ +T ++ +I R + L LCS
Sbjct: 72 SSNDIIIKKLVYLYIVHYSKSNPDLLLLVVNTL--RRDCIDRNPII--RGLALRSLCS 125
Score = 154 (59.3 bits), Expect = 1.5e-21, Sum P(3) = 1.5e-21
Identities = 45/162 (27%), Positives = 83/162 (51%)
Query: 285 KKLAPPLVTLL-SSEP-EVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKL 342
+++ PL+TL+ SSE E + L +I+L++ + P + K F+ K++DP+Y+K K+
Sbjct: 286 ERIKEPLITLMESSESNETSFTILHHIHLLMSRSPRLFNRYYKHFYCKFDDPLYIKTLKV 345
Query: 343 DIMIRLASQA----NIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTL 398
++ +AS +I ++L EL EY E D ++++ AI A K + + E+
Sbjct: 346 QVLKEIASNQTFIESIDEILQELSEYVYEGDHSLCKQSINAITVIAQKHKNTQEKYP--- 402
Query: 399 LDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIV 440
I E+I + S L G D+N + +L+ I+
Sbjct: 403 ---IDESVLEKIFLPYLSVSSNLGGAGDDNISINEGILSFIL 441
Score = 141 (54.7 bits), Expect = 7.0e-20, Sum P(3) = 7.0e-20
Identities = 42/155 (27%), Positives = 77/155 (49%)
Query: 55 VNCMQTDNLE--LKKLVYLYL---MNYAKSHPDMAIMAFSTFFYQKSSSSFQCMIDIRSI 109
+N D ++ L++++Y Y+ M+ + PD+ ++A S K + +S
Sbjct: 35 INERNADKIKDILQRIIY-YMTIGMDVSVLFPDVIMVASSNDIIIKKLVYLYIVHYSKSN 93
Query: 110 PLFDLCSSVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRK 169
P L V +DC D NP+IR LA+R++ + EY + + L D YVRK
Sbjct: 94 PDL-LLLVVNTLRRDCIDRNPIIRGLALRSLCSLDSKNTLEYATIEINRSLTDFSGYVRK 152
Query: 170 TAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNP 204
TA + +AKLY ++ + + + ++ D++ D +P
Sbjct: 153 TALLGLAKLYHLSKEAFDLDIIIPKIFDMIMDQDP 187
Score = 93 (37.8 bits), Expect = 7.2e-12, Sum P(2) = 7.2e-12
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 412 NADELLESFL-EGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD-SDNPD 469
N+ ++E F E F + T V+ QLLT +K+F RP + +++++L D S +P
Sbjct: 498 NSPYIIEEFFNEKFDQQPTFVKTQLLTTSLKVFFDRPGEMLPILKRILKKCCSDLSQDPG 557
Query: 470 LRDRGFIYWRLL 481
L + Y R++
Sbjct: 558 LHEISLFYSRII 569
Score = 79 (32.9 bits), Expect = 2.3e-51, Sum P(2) = 2.3e-51
Identities = 20/82 (24%), Positives = 39/82 (47%)
Query: 807 ASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDE-------PEARAS 859
A NI+ ++ ++ +KD R +P +T++ + ENL + P A S
Sbjct: 425 AGDDNISINEGILSFILISLKDFLRVFPKHLKTVLPYINENLIGIGSVSNYTLPPSANES 484
Query: 860 MIWIIGEYAERIDNADELLESF 881
++W++GE N+ ++E F
Sbjct: 485 VLWMLGESPNSQVNSPYIIEEF 506
Score = 47 (21.6 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 18/73 (24%), Positives = 35/73 (47%)
Query: 385 IKVEQSAERCVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFL 444
IK ++ E +L+ + ++Y + DE L+ L D + L + +K+FL
Sbjct: 216 IKFKEFNEWSQCIILECL-SRYTP--SSEDESLD-ILNLLDDRLSHSNSALTLSTIKIFL 271
Query: 445 KRPTDTQELVQQV 457
K + +E+ +QV
Sbjct: 272 KYTDEFEEIQEQV 284
Score = 41 (19.5 bits), Expect = 5.2e-10, Sum P(3) = 5.2e-10
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 410 IDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQE 452
I++ DE+L+ E ++ + + Q + AI + K +TQE
Sbjct: 358 IESIDEILQELSEYVYEGDHSLCKQSINAITVIAQKHK-NTQE 399
Score = 37 (18.1 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 798 EKLDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENL 848
E LDI+ L + ++ N + + IK IF KY +++E I + E +
Sbjct: 243 ESLDILNLLDDR--LSHSNSAL--TLSTIK-IFLKYTDEFEEIQEQVYERI 288
>UNIPROTKB|K7EJ01 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
Pfam:PF01602 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PANTHER:PTHR11134 EMBL:AC006237 HGNC:HGNC:563 EMBL:AC015911
EMBL:AC004134 Ensembl:ENST00000588116 Uniprot:K7EJ01
Length = 164
Score = 331 (121.6 bits), Expect = 4.6e-51, Sum P(2) = 4.6e-51
Identities = 62/70 (88%), Positives = 70/70 (100%)
Query: 814 QVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDN 873
+VNYVVQEAIVVI+DIFRKYPNKYE+II+TLCENLD+LDEP+ARA+MIWI+GEYAERIDN
Sbjct: 51 KVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEYAERIDN 110
Query: 874 ADELLESFLE 883
ADELLESFLE
Sbjct: 111 ADELLESFLE 120
Score = 263 (97.6 bits), Expect = 9.7e-44, Sum P(2) = 9.7e-44
Identities = 53/59 (89%), Positives = 58/59 (98%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQ 463
+YAERIDNADELLESFLEGFHDE+TQVQL LLTAIVKLFLK+P++TQELVQQVLSLATQ
Sbjct: 103 EYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSLATQ 161
Score = 237 (88.5 bits), Expect = 4.6e-51, Sum P(2) = 4.6e-51
Identities = 48/51 (94%), Positives = 51/51 (100%)
Query: 355 AQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK 405
++VL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK
Sbjct: 1 SEVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK 51
Score = 45 (20.9 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 14/61 (22%), Positives = 29/61 (47%)
Query: 309 INLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLSELKEYATEV 368
+N +VQ+ +++ + + KY I E LD + ++A + ++ E YA +
Sbjct: 52 VNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGE---YAERI 108
Query: 369 D 369
D
Sbjct: 109 D 109
>UNIPROTKB|H7C034 [details] [associations]
symbol:AP1B1 "AP-1 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
Pfam:PF01602 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 PANTHER:PTHR11134
EMBL:AC000041 EMBL:AC002059 HGNC:HGNC:554 ChiTaRS:AP1B1
ProteinModelPortal:H7C034 PRIDE:H7C034 Ensembl:ENST00000415756
Uniprot:H7C034
Length = 173
Score = 283 (104.7 bits), Expect = 1.6e-50, Sum P(3) = 1.6e-50
Identities = 52/59 (88%), Positives = 59/59 (100%)
Query: 814 QVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERID 872
+VNYVVQEAIVVIKDIFRKYPNKYE++I+TLCENLD+LDEPEARA+MIWI+GEYAERID
Sbjct: 115 KVNYVVQEAIVVIKDIFRKYPNKYESVIATLCENLDSLDEPEARAAMIWIVGEYAERID 173
Score = 239 (89.2 bits), Expect = 1.6e-50, Sum P(3) = 1.6e-50
Identities = 49/50 (98%), Positives = 50/50 (100%)
Query: 356 QVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK 405
QVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK
Sbjct: 66 QVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK 115
Score = 64 (27.6 bits), Expect = 1.6e-50, Sum P(3) = 1.6e-50
Identities = 14/14 (100%), Positives = 14/14 (100%)
Query: 343 DIMIRLASQANIAQ 356
DIMIRLASQANIAQ
Sbjct: 2 DIMIRLASQANIAQ 15
Score = 64 (27.6 bits), Expect = 9.7e-28, Sum P(2) = 9.7e-28
Identities = 14/14 (100%), Positives = 14/14 (100%)
Query: 801 DIMIRLASQANIAQ 814
DIMIRLASQANIAQ
Sbjct: 2 DIMIRLASQANIAQ 15
>CGD|CAL0003766 [details] [associations]
symbol:orf19.7212 species:5476 "Candida albicans" [GO:0030447
"filamentous growth" evidence=IMP] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 PIRSF:PIRSF002291 CGD:CAL0003766 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 GO:GO:0030447 eggNOG:COG5096
HOGENOM:HOG000163270 PANTHER:PTHR11134 EMBL:AACQ01000092
RefSeq:XP_715013.1 ProteinModelPortal:Q59ZX9 STRING:Q59ZX9
GeneID:3643342 KEGG:cal:CaO19.7212 Uniprot:Q59ZX9
Length = 767
Score = 472 (171.2 bits), Expect = 5.6e-42, P = 5.6e-42
Identities = 107/327 (32%), Positives = 194/327 (59%)
Query: 497 VIASMTVGK-DVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDC 555
V+A++ + +V+ L D++ M+ D+LE++KL Y+ YA ++PD A A+ F +
Sbjct: 116 VLANIILNNHEVTNLMKDIIPLMKIDDLEVRKLCCEYISTYATTNPD-AEDAIPFFSRFH 174
Query: 556 EDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQL 615
D NPL+R L+++TM I + ++ D+DP VRK+AA ++Y +
Sbjct: 175 SDPNPLLRVLSLKTMVSINRKEFLNLSITSCKRSFSDKDPDVRKSAAYAAGQIYQHDPAR 234
Query: 616 VEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEAS-TSGVALIEMNAQTINKLLTALNE 674
E +G ++ L L D N V+++A+A+L + E S T + + + +A T+ KLL A NE
Sbjct: 235 AEREGLIELLNQSLYDENSSVISSALASLGTVIENSKTLNLKIDKNHALTLIKLLRATNE 294
Query: 675 CTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGE 734
W Q +IL++L +Y+P+++ EA ++ E + P L H N++VV++A+KV++
Sbjct: 295 ---WQQTYILNALMSYTPQNEDEALNLIEAVLPSLQHENSSVVMNAIKVVIYYCNYARNP 351
Query: 735 GDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIY 794
+ L K+L LV+LLS E Q++ LRN+ L++ R + + ++++F+ +++DPIY
Sbjct: 352 ELRLPVLPKRLGTSLVSLLSKPAETQFLVLRNVILLLLGRKEFVHFDVEMFYCRFDDPIY 411
Query: 795 VKLEKLDIMIRLASQANIAQVNYVVQE 821
VK KL+I+ LA+++N+ V ++E
Sbjct: 412 VKDTKLEIIYLLANESNVGSVLRELEE 438
Score = 295 (108.9 bits), Expect = 1.2e-44, Sum P(3) = 1.2e-44
Identities = 56/142 (39%), Positives = 95/142 (66%)
Query: 283 LTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKL 342
L K+L LV+LLS E Q++ LRN+ L++ R + + ++++F+ +++DPIYVK KL
Sbjct: 358 LPKRLGTSLVSLLSKPAETQFLVLRNVILLLLGRKEFVHFDVEMFYCRFDDPIYVKDTKL 417
Query: 343 DIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI 402
+I+ LA+++N+ VL EL+EYATEVDV RKA+RA G A+K+E +AE+CV + DL+
Sbjct: 418 EIIYLLANESNVGSVLRELEEYATEVDVSMARKAIRAFGNLAVKLENAAEQCVEVICDLV 477
Query: 403 QTKYAERIDNADELLESFLEGF 424
+ + + ++++ L +
Sbjct: 478 SNGISYIVQESAIVIKNILRKY 499
Score = 194 (73.4 bits), Expect = 1.2e-44, Sum P(3) = 1.2e-44
Identities = 35/79 (44%), Positives = 52/79 (65%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+Y + I + +LE F+ F D+ VQ LTA+ K +LK P + ++ +VL AT++
Sbjct: 532 QYCQNIKESKSILEDFITSFKDDPLDVQYATLTAVAKYYLKFPEQGESVILRVLKWATEE 591
Query: 465 SDNPDLRDRGFIYWRLLST 483
DNPD+RDRG+IYWRLLS+
Sbjct: 592 VDNPDIRDRGYIYWRLLSS 610
Score = 181 (68.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 80/357 (22%), Positives = 158/357 (44%)
Query: 546 MAVNTFVKDCEDSNPLIRALAVRTMGCI-RVDKIT---EYLCEPLRKCLKDEDPYVRKTA 601
+++ + + D +P +R A G I + D E L E L + L DE+ V +A
Sbjct: 200 LSITSCKRSFSDKDPDVRKSAAYAAGQIYQHDPARAEREGLIELLNQSLYDENSSVISSA 259
Query: 602 AVCVAKLYDINAQL---VEDQGFLDQLKDLLSDSNPM---VVANAVAALSEMNEASTSGV 655
+ + + + L ++ L +K LL +N + NA+ + + NE +
Sbjct: 260 LASLGTVIENSKTLNLKIDKNHALTLIK-LLRATNEWQQTYILNALMSYTPQNE--DEAL 316
Query: 656 ALIEMNAQTINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAA 715
LIE + L N + ++ NY+ + + +R+ L +
Sbjct: 317 NLIE----AVLPSLQHENSSVVMNAIKVVIYYCNYARNPELRLPVLPKRLGTSLVSLLSK 372
Query: 716 VVLSAVKVLMKLMEMLPGEGDFVSTLTK----KLAPPLVTLLSSEPEVQYVALRNINL-I 770
+ VL ++ +L G +FV + + P+ + ++ E+ Y+ N+
Sbjct: 373 PAETQFLVLRNVILLLLGRKEFVHFDVEMFYCRFDDPIY-VKDTKLEIIYLLANESNVGS 431
Query: 771 VQKRPDILKHEMKVFF----VKYNDPIYVKLEKL-DIMIRLASQANIAQVNYVVQEAIVV 825
V + + E+ V ++ + VKLE + + + ++Y+VQE+ +V
Sbjct: 432 VLRELEEYATEVDVSMARKAIRAFGNLAVKLENAAEQCVEVICDLVSNGISYIVQESAIV 491
Query: 826 IKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFL 882
IK+I RKYP ++E IS L ++ +DEP+A+ + +WI+G+Y + I + +LE F+
Sbjct: 492 IKNILRKYPGQFEFAISELIKHYKLIDEPDAKTAFVWILGQYCQNIKESKSILEDFI 548
Score = 113 (44.8 bits), Expect = 1.2e-44, Sum P(3) = 1.2e-44
Identities = 26/91 (28%), Positives = 44/91 (48%)
Query: 113 DLCSSVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAA 172
D ++ F + D NPL+R L+++TM I + ++ D+DP VRK+AA
Sbjct: 162 DAEDAIPFFSRFHSDPNPLLRVLSLKTMVSINRKEFLNLSITSCKRSFSDKDPDVRKSAA 221
Query: 173 VCVAKLYDINAQLVEDQGFLDQLKDLLSDSN 203
++Y + E +G ++ L L D N
Sbjct: 222 YAAGQIYQHDPARAEREGLIELLNQSLYDEN 252
Score = 109 (43.4 bits), Expect = 3.1e-44, Sum P(3) = 3.1e-44
Identities = 51/184 (27%), Positives = 82/184 (44%)
Query: 1 MTDSKYFTTTKKGEI-FELKGELN-SDXXXXXXXXXXXXIASMTVGK-DVSALFPDVVNC 57
M+D K FT +K E+ EL+ S +A++ + +V+ L D++
Sbjct: 78 MSDGKLFTRSKTTELRTELEQAFKKSKPVVRVKVVLKKVLANIILNNHEVTNLMKDIIPL 137
Query: 58 MQTDNLELKKLVYLYLMNYAKSHPDM--AIMAFSTFFYQKSSS----SFQCMIDIRSIPL 111
M+ D+LE++KL Y+ YA ++PD AI FS F + S + M+ I
Sbjct: 138 MKIDDLEVRKLCCEYISTYATTNPDAEDAIPFFSRFHSDPNPLLRVLSLKTMVSINRKEF 197
Query: 112 FDLCSSVGVFVKDCEDSNPLIRALAVRTMGCI-RVDKIT---EYLCEPLRKCLKDEDPYV 167
+L S+ + D +P +R A G I + D E L E L + L DE+ V
Sbjct: 198 LNL--SITSCKRSFSDKDPDVRKSAAYAAGQIYQHDPARAEREGLIELLNQSLYDENSSV 255
Query: 168 RKTA 171
+A
Sbjct: 256 ISSA 259
Score = 42 (19.8 bits), Expect = 2.9e-37, Sum P(3) = 2.9e-37
Identities = 22/109 (20%), Positives = 44/109 (40%)
Query: 128 SNPLIRALAV--RTMGCIRVD--KITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINA 183
S P++R V + + I ++ ++T L + + +K +D VRK ++ N
Sbjct: 103 SKPVVRVKVVLKKVLANIILNNHEVTN-LMKDIIPLMKIDDLEVRKLCCEYISTYATTNP 161
Query: 184 QLVEDQGFLDQLKDLLSDSNPMXXXXXXXXXXXXPRKSYWQRNLSSRKK 232
+ F + SD NP+ RK + +++S K+
Sbjct: 162 DAEDAIPFFSRFH---SDPNPLLRVLSLKTMVSINRKEFLNLSITSCKR 207
Score = 38 (18.4 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 17/70 (24%), Positives = 28/70 (40%)
Query: 428 NTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTF 487
N L+ I+ L + ++L + +S T + NPD D + R S N
Sbjct: 123 NNHEVTNLMKDIIPLMKIDDLEVRKLCCEYIS--TYATTNPDAEDAIPFFSRFHSDPNPL 180
Query: 488 YILLHLTRLV 497
+L L +V
Sbjct: 181 LRVLSLKTMV 190
>UNIPROTKB|Q59ZX9 [details] [associations]
symbol:APL1 "Potential clathrin-associated protein AP-2
complex component" species:237561 "Candida albicans SC5314"
[GO:0030447 "filamentous growth" evidence=IMP] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 PIRSF:PIRSF002291 CGD:CAL0003766 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 GO:GO:0030447 eggNOG:COG5096
HOGENOM:HOG000163270 PANTHER:PTHR11134 EMBL:AACQ01000092
RefSeq:XP_715013.1 ProteinModelPortal:Q59ZX9 STRING:Q59ZX9
GeneID:3643342 KEGG:cal:CaO19.7212 Uniprot:Q59ZX9
Length = 767
Score = 472 (171.2 bits), Expect = 5.6e-42, P = 5.6e-42
Identities = 107/327 (32%), Positives = 194/327 (59%)
Query: 497 VIASMTVGK-DVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDC 555
V+A++ + +V+ L D++ M+ D+LE++KL Y+ YA ++PD A A+ F +
Sbjct: 116 VLANIILNNHEVTNLMKDIIPLMKIDDLEVRKLCCEYISTYATTNPD-AEDAIPFFSRFH 174
Query: 556 EDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQL 615
D NPL+R L+++TM I + ++ D+DP VRK+AA ++Y +
Sbjct: 175 SDPNPLLRVLSLKTMVSINRKEFLNLSITSCKRSFSDKDPDVRKSAAYAAGQIYQHDPAR 234
Query: 616 VEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEAS-TSGVALIEMNAQTINKLLTALNE 674
E +G ++ L L D N V+++A+A+L + E S T + + + +A T+ KLL A NE
Sbjct: 235 AEREGLIELLNQSLYDENSSVISSALASLGTVIENSKTLNLKIDKNHALTLIKLLRATNE 294
Query: 675 CTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGE 734
W Q +IL++L +Y+P+++ EA ++ E + P L H N++VV++A+KV++
Sbjct: 295 ---WQQTYILNALMSYTPQNEDEALNLIEAVLPSLQHENSSVVMNAIKVVIYYCNYARNP 351
Query: 735 GDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIY 794
+ L K+L LV+LLS E Q++ LRN+ L++ R + + ++++F+ +++DPIY
Sbjct: 352 ELRLPVLPKRLGTSLVSLLSKPAETQFLVLRNVILLLLGRKEFVHFDVEMFYCRFDDPIY 411
Query: 795 VKLEKLDIMIRLASQANIAQVNYVVQE 821
VK KL+I+ LA+++N+ V ++E
Sbjct: 412 VKDTKLEIIYLLANESNVGSVLRELEE 438
Score = 295 (108.9 bits), Expect = 1.2e-44, Sum P(3) = 1.2e-44
Identities = 56/142 (39%), Positives = 95/142 (66%)
Query: 283 LTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKL 342
L K+L LV+LLS E Q++ LRN+ L++ R + + ++++F+ +++DPIYVK KL
Sbjct: 358 LPKRLGTSLVSLLSKPAETQFLVLRNVILLLLGRKEFVHFDVEMFYCRFDDPIYVKDTKL 417
Query: 343 DIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI 402
+I+ LA+++N+ VL EL+EYATEVDV RKA+RA G A+K+E +AE+CV + DL+
Sbjct: 418 EIIYLLANESNVGSVLRELEEYATEVDVSMARKAIRAFGNLAVKLENAAEQCVEVICDLV 477
Query: 403 QTKYAERIDNADELLESFLEGF 424
+ + + ++++ L +
Sbjct: 478 SNGISYIVQESAIVIKNILRKY 499
Score = 194 (73.4 bits), Expect = 1.2e-44, Sum P(3) = 1.2e-44
Identities = 35/79 (44%), Positives = 52/79 (65%)
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+Y + I + +LE F+ F D+ VQ LTA+ K +LK P + ++ +VL AT++
Sbjct: 532 QYCQNIKESKSILEDFITSFKDDPLDVQYATLTAVAKYYLKFPEQGESVILRVLKWATEE 591
Query: 465 SDNPDLRDRGFIYWRLLST 483
DNPD+RDRG+IYWRLLS+
Sbjct: 592 VDNPDIRDRGYIYWRLLSS 610
Score = 181 (68.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 80/357 (22%), Positives = 158/357 (44%)
Query: 546 MAVNTFVKDCEDSNPLIRALAVRTMGCI-RVDKIT---EYLCEPLRKCLKDEDPYVRKTA 601
+++ + + D +P +R A G I + D E L E L + L DE+ V +A
Sbjct: 200 LSITSCKRSFSDKDPDVRKSAAYAAGQIYQHDPARAEREGLIELLNQSLYDENSSVISSA 259
Query: 602 AVCVAKLYDINAQL---VEDQGFLDQLKDLLSDSNPM---VVANAVAALSEMNEASTSGV 655
+ + + + L ++ L +K LL +N + NA+ + + NE +
Sbjct: 260 LASLGTVIENSKTLNLKIDKNHALTLIK-LLRATNEWQQTYILNALMSYTPQNE--DEAL 316
Query: 656 ALIEMNAQTINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAA 715
LIE + L N + ++ NY+ + + +R+ L +
Sbjct: 317 NLIE----AVLPSLQHENSSVVMNAIKVVIYYCNYARNPELRLPVLPKRLGTSLVSLLSK 372
Query: 716 VVLSAVKVLMKLMEMLPGEGDFVSTLTK----KLAPPLVTLLSSEPEVQYVALRNINL-I 770
+ VL ++ +L G +FV + + P+ + ++ E+ Y+ N+
Sbjct: 373 PAETQFLVLRNVILLLLGRKEFVHFDVEMFYCRFDDPIY-VKDTKLEIIYLLANESNVGS 431
Query: 771 VQKRPDILKHEMKVFF----VKYNDPIYVKLEKL-DIMIRLASQANIAQVNYVVQEAIVV 825
V + + E+ V ++ + VKLE + + + ++Y+VQE+ +V
Sbjct: 432 VLRELEEYATEVDVSMARKAIRAFGNLAVKLENAAEQCVEVICDLVSNGISYIVQESAIV 491
Query: 826 IKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLESFL 882
IK+I RKYP ++E IS L ++ +DEP+A+ + +WI+G+Y + I + +LE F+
Sbjct: 492 IKNILRKYPGQFEFAISELIKHYKLIDEPDAKTAFVWILGQYCQNIKESKSILEDFI 548
Score = 113 (44.8 bits), Expect = 1.2e-44, Sum P(3) = 1.2e-44
Identities = 26/91 (28%), Positives = 44/91 (48%)
Query: 113 DLCSSVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAA 172
D ++ F + D NPL+R L+++TM I + ++ D+DP VRK+AA
Sbjct: 162 DAEDAIPFFSRFHSDPNPLLRVLSLKTMVSINRKEFLNLSITSCKRSFSDKDPDVRKSAA 221
Query: 173 VCVAKLYDINAQLVEDQGFLDQLKDLLSDSN 203
++Y + E +G ++ L L D N
Sbjct: 222 YAAGQIYQHDPARAEREGLIELLNQSLYDEN 252
Score = 109 (43.4 bits), Expect = 3.1e-44, Sum P(3) = 3.1e-44
Identities = 51/184 (27%), Positives = 82/184 (44%)
Query: 1 MTDSKYFTTTKKGEI-FELKGELN-SDXXXXXXXXXXXXIASMTVGK-DVSALFPDVVNC 57
M+D K FT +K E+ EL+ S +A++ + +V+ L D++
Sbjct: 78 MSDGKLFTRSKTTELRTELEQAFKKSKPVVRVKVVLKKVLANIILNNHEVTNLMKDIIPL 137
Query: 58 MQTDNLELKKLVYLYLMNYAKSHPDM--AIMAFSTFFYQKSSS----SFQCMIDIRSIPL 111
M+ D+LE++KL Y+ YA ++PD AI FS F + S + M+ I
Sbjct: 138 MKIDDLEVRKLCCEYISTYATTNPDAEDAIPFFSRFHSDPNPLLRVLSLKTMVSINRKEF 197
Query: 112 FDLCSSVGVFVKDCEDSNPLIRALAVRTMGCI-RVDKIT---EYLCEPLRKCLKDEDPYV 167
+L S+ + D +P +R A G I + D E L E L + L DE+ V
Sbjct: 198 LNL--SITSCKRSFSDKDPDVRKSAAYAAGQIYQHDPARAEREGLIELLNQSLYDENSSV 255
Query: 168 RKTA 171
+A
Sbjct: 256 ISSA 259
Score = 42 (19.8 bits), Expect = 2.9e-37, Sum P(3) = 2.9e-37
Identities = 22/109 (20%), Positives = 44/109 (40%)
Query: 128 SNPLIRALAV--RTMGCIRVD--KITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINA 183
S P++R V + + I ++ ++T L + + +K +D VRK ++ N
Sbjct: 103 SKPVVRVKVVLKKVLANIILNNHEVTN-LMKDIIPLMKIDDLEVRKLCCEYISTYATTNP 161
Query: 184 QLVEDQGFLDQLKDLLSDSNPMXXXXXXXXXXXXPRKSYWQRNLSSRKK 232
+ F + SD NP+ RK + +++S K+
Sbjct: 162 DAEDAIPFFSRFH---SDPNPLLRVLSLKTMVSINRKEFLNLSITSCKR 207
Score = 38 (18.4 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 17/70 (24%), Positives = 28/70 (40%)
Query: 428 NTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTF 487
N L+ I+ L + ++L + +S T + NPD D + R S N
Sbjct: 123 NNHEVTNLMKDIIPLMKIDDLEVRKLCCEYIS--TYATTNPDAEDAIPFFSRFHSDPNPL 180
Query: 488 YILLHLTRLV 497
+L L +V
Sbjct: 181 LRVLSLKTMV 190
>UNIPROTKB|Q9Y6B7 [details] [associations]
symbol:AP4B1 "AP-4 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005215 "transporter activity"
evidence=TAS] Reactome:REACT_11123 InterPro:IPR002553
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM01020 GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0005215 GO:GO:0005802 eggNOG:COG5096 GO:GO:0030131
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
EMBL:AF092094 EMBL:AB209817 EMBL:AL137856 EMBL:BC014146
IPI:IPI00002150 RefSeq:NP_001240781.1 RefSeq:NP_001240782.1
RefSeq:NP_006585.2 UniGene:Hs.515048 ProteinModelPortal:Q9Y6B7
SMR:Q9Y6B7 DIP:DIP-24209N IntAct:Q9Y6B7 STRING:Q9Y6B7
PhosphoSite:Q9Y6B7 DMDM:126302520 PaxDb:Q9Y6B7 PRIDE:Q9Y6B7
DNASU:10717 Ensembl:ENST00000256658 Ensembl:ENST00000369569
GeneID:10717 KEGG:hsa:10717 UCSC:uc001eeb.3 CTD:10717
GeneCards:GC01M114437 HGNC:HGNC:572 HPA:HPA028162 HPA:HPA028399
HPA:HPA028652 MIM:607245 MIM:614066 neXtProt:NX_Q9Y6B7
Orphanet:280763 PharmGKB:PA24864 HOGENOM:HOG000294128
HOVERGEN:HBG050521 InParanoid:Q9Y6B7 KO:K12401 OMA:RPWKAYL
OrthoDB:EOG48KR9Z PhylomeDB:Q9Y6B7 GenomeRNAi:10717 NextBio:40689
ArrayExpress:Q9Y6B7 Bgee:Q9Y6B7 CleanEx:HS_AP4B1
Genevestigator:Q9Y6B7 GermOnline:ENSG00000134262 Uniprot:Q9Y6B7
Length = 739
Score = 494 (179.0 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 123/396 (31%), Positives = 210/396 (53%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VI MT G D+S +F ++V T ++ KKLVYLY+ YA PD+A++A+NT KDC
Sbjct: 36 VIRYMTQGLDMSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCS 95
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NP++R LA+R+M +R+ + EY+ +P+ L+D+ YVR+ A + AK+++++
Sbjct: 96 DPNPMVRGLALRSMCSLRMPGVQEYIQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSE 155
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
D +++L LL D +P+VV N + +L E+ + GV + N + LL +++
Sbjct: 156 VDGALVNELYSLLRDQDPIVVVNCLRSLEEILKQE-GGVVI---NKPIAHHLLNRMSKLD 211
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
+WGQ +L+ L Y P+ + E I + L ++ VV+ A K+ + L +M P
Sbjct: 212 QWGQAEVLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFLILAKMFP---- 267
Query: 737 FVST-LTKKLAPPLVTLLSSEP-EVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIY 794
V T + ++ PL+ SSE E+ +VAL ++ I+ P K FF Y++P Y
Sbjct: 268 HVQTDVLVRVKGPLLAACSSESRELCFVALCHVRQILHSLPGHFSSHYKKFFCSYSEPHY 327
Query: 795 VKLEKLDIMIRLASQANIAQV-----NYVV-------QEAIVVIKDIFRKYPNKYETIIS 842
+KL+K++++ L + N+ QV Y Q AI I I R Y ++ I++
Sbjct: 328 IKLQKVEVLCELVNDENVQQVLEELRGYCTDVSADFAQAAIFAIGGIARTYTDQCVQILT 387
Query: 843 TLC----ENLDTLDEPEARASMIWIIGEYAERIDNA 874
L E++ T+ R ++W+ + E + A
Sbjct: 388 ELLGLRQEHITTVVVQTFR-DLVWLCPQCTEAVCQA 422
Score = 188 (71.2 bits), Expect = 2.6e-27, Sum P(3) = 2.6e-27
Identities = 41/114 (35%), Positives = 65/114 (57%)
Query: 290 PLVTLLSSEP-EVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRL 348
PL+ SSE E+ +VAL ++ I+ P K FF Y++P Y+KL+K++++ L
Sbjct: 280 PLLAACSSESRELCFVALCHVRQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCEL 339
Query: 349 ASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI 402
+ N+ QVL EL+ Y T+V DF + A+ AIG A ++CV L +L+
Sbjct: 340 VNDENVQQVLEELRGYCTDVSADFAQAAIFAIGGIA---RTYTDQCVQILTELL 390
Score = 167 (63.8 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 48/142 (33%), Positives = 75/142 (52%)
Query: 356 QVLSEL----KEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLD------LIQTK 405
Q+L+EL +E+ T V V R V +C V Q+ C + D LI
Sbjct: 384 QILTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCEENIQDSEGKQALIWLL 443
Query: 406 --YAERIDNADELLESFLEGFHDEN-TQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLAT 462
+ ERI NA +LE F+E E V+++LLTA+++LFL RP + Q+++ ++L
Sbjct: 444 GVHGERIPNAPYVLEDFVENVKSETFPAVKMELLTALLRLFLSRPAECQDMLGRLLYYCI 503
Query: 463 QDSDNPDLRDRGFIYWRLLSTG 484
++ + +RDRG Y+RLL G
Sbjct: 504 EEEKDMAVRDRGLFYYRLLLVG 525
Score = 163 (62.4 bits), Expect = 2.6e-27, Sum P(3) = 2.6e-27
Identities = 29/89 (32%), Positives = 55/89 (61%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
++ KDC D NP++R LA+R+M +R+ + EY+ +P+ L+D+ YVR+ A + A
Sbjct: 86 AINTLCKDCSDPNPMVRGLALRSMCSLRMPGVQEYIQQPILNGLRDKASYVRRVAVLGCA 145
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
K+++++ D +++L LL D +P+
Sbjct: 146 KMHNLHGDSEVDGALVNELYSLLRDQDPI 174
Score = 134 (52.2 bits), Expect = 2.5e-24, Sum P(3) = 2.5e-24
Identities = 50/162 (30%), Positives = 76/162 (46%)
Query: 38 IASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQKSS 97
I MT G D+S +F ++V T ++ KKLVYLY+ YA PD+A++A +T K
Sbjct: 37 IRYMTQGLDMSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLC--KDC 94
Query: 98 SSFQCMIDIRSIPLFDLCS--SVGV-------FVKDCEDSNPLIRALAVRTMGCIRVDKI 148
S M+ R + L +CS GV + D +R +AV +GC ++ +
Sbjct: 95 SDPNPMV--RGLALRSMCSLRMPGVQEYIQQPILNGLRDKASYVRRVAV--LGCAKMHNL 150
Query: 149 ---TEY---LCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 184
+E L L L+D+DP V C+ L +I Q
Sbjct: 151 HGDSEVDGALVNELYSLLRDQDPIV---VVNCLRSLEEILKQ 189
Score = 91 (37.1 bits), Expect = 2.6e-27, Sum P(3) = 2.6e-27
Identities = 19/69 (27%), Positives = 36/69 (52%)
Query: 817 YVVQEAIVVIKDIFRKYPNKYETIISTL--CENLDTLDEPEARASMIWIIGEYAERIDNA 874
++ + +D+ P E + L CE + + + E + ++IW++G + ERI NA
Sbjct: 396 HITTVVVQTFRDLVWLCPQCTEAVCQALPGCE--ENIQDSEGKQALIWLLGVHGERIPNA 453
Query: 875 DELLESFLE 883
+LE F+E
Sbjct: 454 PYVLEDFVE 462
Score = 47 (21.6 bits), Expect = 1.1e-12, Sum P(3) = 1.1e-12
Identities = 22/85 (25%), Positives = 37/85 (43%)
Query: 386 KVEQSAERCVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLK 445
K++Q + V L Q + E + + LL+SFL+ +L + K+F
Sbjct: 209 KLDQWGQAEVLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFLILAKMFPH 268
Query: 446 RPTDTQELVQQVLSLATQDSDNPDL 470
TD V+ L LA S++ +L
Sbjct: 269 VQTDVLVRVKGPL-LAACSSESREL 292
>UNIPROTKB|F6PZ41 [details] [associations]
symbol:AP4B1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005802 "trans-Golgi network" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM01020 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 GO:GO:0005802
GO:GO:0030131 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 GeneTree:ENSGT00530000063138 OMA:EQFEKTW
EMBL:DAAA02007479 IPI:IPI00703589 PRIDE:F6PZ41
Ensembl:ENSBTAT00000004711 Uniprot:F6PZ41
Length = 739
Score = 483 (175.1 bits), Expect = 2.3e-43, P = 2.3e-43
Identities = 121/396 (30%), Positives = 208/396 (52%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VI MT G D+S +F ++V T ++ KKLVYLY+ YA PD+A++A+NT KDC
Sbjct: 36 VIRHMTQGVDMSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCS 95
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NP++R LA+R+M +R+ + EY+ +P+ L+D+ YVR+ A + AK+++++
Sbjct: 96 DPNPMVRGLALRSMCSLRMPGVQEYIQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSE 155
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
D +++L LL D +P+VV N + +L E+ + GV + N + LL +++
Sbjct: 156 VDGALVNELYSLLRDQDPIVVVNCLRSLEEILKQE-GGVVI---NKPIAHHLLNRMSKLD 211
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
+WGQ +L+ L Y P+ + E I + L ++ VV+ A K+ + L + P
Sbjct: 212 QWGQAEVLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFLILAKKFP---- 267
Query: 737 FVST-LTKKLAPPLVTLLSSEP-EVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIY 794
V T + ++ PL+ SSE E+ + AL ++ I+ P K FF Y++P Y
Sbjct: 268 HVQTDVLMQVKGPLLAACSSESRELCFAALCHVRQILHSLPGHFSSHYKKFFCSYSEPHY 327
Query: 795 VKLEKLDIMIRLASQANIAQV-----NYVV-------QEAIVVIKDIFRKYPNKYETIIS 842
+KL+K++++ L + N+ QV Y Q AI+ I I R Y ++ I++
Sbjct: 328 IKLQKVEVLCELVNDENVQQVLEELRGYCTDVSADFAQAAILAIGGIARTYTDQCMQILT 387
Query: 843 TLC----ENLDTLDEPEARASMIWIIGEYAERIDNA 874
L E++ T+ R + W+ + E + A
Sbjct: 388 ELLGLRQEHITTVVVQTFR-DLAWLCPQCTEAVCQA 422
Score = 182 (69.1 bits), Expect = 3.0e-26, Sum P(3) = 3.0e-26
Identities = 39/114 (34%), Positives = 64/114 (56%)
Query: 290 PLVTLLSSEP-EVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRL 348
PL+ SSE E+ + AL ++ I+ P K FF Y++P Y+KL+K++++ L
Sbjct: 280 PLLAACSSESRELCFAALCHVRQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCEL 339
Query: 349 ASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI 402
+ N+ QVL EL+ Y T+V DF + A+ AIG A ++C+ L +L+
Sbjct: 340 VNDENVQQVLEELRGYCTDVSADFAQAAILAIGGIA---RTYTDQCMQILTELL 390
Score = 163 (62.4 bits), Expect = 3.0e-26, Sum P(3) = 3.0e-26
Identities = 29/89 (32%), Positives = 55/89 (61%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
++ KDC D NP++R LA+R+M +R+ + EY+ +P+ L+D+ YVR+ A + A
Sbjct: 86 AINTLCKDCSDPNPMVRGLALRSMCSLRMPGVQEYIQQPILNGLRDKASYVRRVAVLGCA 145
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
K+++++ D +++L LL D +P+
Sbjct: 146 KMHNLHGDSEVDGALVNELYSLLRDQDPI 174
Score = 158 (60.7 bits), Expect = 2.0e-19, Sum P(2) = 2.0e-19
Identities = 45/142 (31%), Positives = 73/142 (51%)
Query: 356 QVLSEL----KEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLD------LIQTK 405
Q+L+EL +E+ T V V R +C V Q+ C + D LI
Sbjct: 384 QILTELLGLRQEHITTVVVQTFRDLAWLCPQCTEAVCQALPGCEENIQDSEGKQALIWLL 443
Query: 406 --YAERIDNADELLESFLEGFHDEN-TQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLAT 462
+ +RI NA +LE F+E E V+++LLTA+++LF RP + Q+++ ++L
Sbjct: 444 GVHGKRIPNAPYVLEDFIENVKSETFPAVKMELLTAVLRLFFSRPAECQDMLGRLLHYCI 503
Query: 463 QDSDNPDLRDRGFIYWRLLSTG 484
++ + +RDRG Y+RLL G
Sbjct: 504 EEEKDMAVRDRGLFYYRLLLAG 525
Score = 135 (52.6 bits), Expect = 2.3e-23, Sum P(3) = 2.3e-23
Identities = 50/162 (30%), Positives = 76/162 (46%)
Query: 38 IASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQKSS 97
I MT G D+S +F ++V T ++ KKLVYLY+ YA PD+A++A +T K
Sbjct: 37 IRHMTQGVDMSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLC--KDC 94
Query: 98 SSFQCMIDIRSIPLFDLCS--SVGV-------FVKDCEDSNPLIRALAVRTMGCIRVDKI 148
S M+ R + L +CS GV + D +R +AV +GC ++ +
Sbjct: 95 SDPNPMV--RGLALRSMCSLRMPGVQEYIQQPILNGLRDKASYVRRVAV--LGCAKMHNL 150
Query: 149 ---TEY---LCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 184
+E L L L+D+DP V C+ L +I Q
Sbjct: 151 HGDSEVDGALVNELYSLLRDQDPIV---VVNCLRSLEEILKQ 189
Score = 87 (35.7 bits), Expect = 3.0e-26, Sum P(3) = 3.0e-26
Identities = 18/69 (26%), Positives = 36/69 (52%)
Query: 817 YVVQEAIVVIKDIFRKYPNKYETIISTL--CENLDTLDEPEARASMIWIIGEYAERIDNA 874
++ + +D+ P E + L CE + + + E + ++IW++G + +RI NA
Sbjct: 396 HITTVVVQTFRDLAWLCPQCTEAVCQALPGCE--ENIQDSEGKQALIWLLGVHGKRIPNA 453
Query: 875 DELLESFLE 883
+LE F+E
Sbjct: 454 PYVLEDFIE 462
Score = 43 (20.2 bits), Expect = 7.1e-12, Sum P(3) = 7.1e-12
Identities = 22/85 (25%), Positives = 36/85 (42%)
Query: 386 KVEQSAERCVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLK 445
K++Q + V L Q + E + + LL+SFL+ +L + K F
Sbjct: 209 KLDQWGQAEVLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFLILAKKFPH 268
Query: 446 RPTDTQELVQQVLSLATQDSDNPDL 470
TD V+ L LA S++ +L
Sbjct: 269 VQTDVLMQVKGPL-LAACSSESREL 292
>UNIPROTKB|F1SBR2 [details] [associations]
symbol:AP4B1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005802 "trans-Golgi network" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM01020 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 GO:GO:0005802
GO:GO:0030131 PANTHER:PTHR11134 GeneTree:ENSGT00530000063138
CTD:10717 KO:K12401 OMA:EQFEKTW EMBL:CU651648 RefSeq:XP_003125886.1
UniGene:Ssc.38340 Ensembl:ENSSSCT00000007408 GeneID:100516855
KEGG:ssc:100516855 Uniprot:F1SBR2
Length = 737
Score = 482 (174.7 bits), Expect = 3.0e-43, P = 3.0e-43
Identities = 121/396 (30%), Positives = 207/396 (52%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VI MT G D+S +F ++V T ++ KKLVYLY+ YA PD+A++A+NT KDC
Sbjct: 36 VIRHMTQGLDMSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCS 95
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NP++R LA+R+M +R+ + EY+ +P+ L+D+ YVR+ A + AK++++
Sbjct: 96 DPNPMVRGLALRSMCSLRMPGVQEYIQQPILNGLRDKASYVRRVAVLGCAKMHNLQGDSE 155
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
D +++L LL D +P+VV N + +L E+ + GV + N + LL + +
Sbjct: 156 VDGALVNELYSLLRDQDPIVVVNCLRSLEEILKQE-GGVVI---NKPIAHHLLNRMPKLD 211
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
+WGQ +L+ L Y P+ + E I + L ++ VV+ A K+ + L + P
Sbjct: 212 QWGQAEVLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFLILAKKFP---- 267
Query: 737 FVST-LTKKLAPPLVTLLSSEP-EVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIY 794
V T + ++ PL+ SSE E+ + AL ++ I+ P K FF Y++P Y
Sbjct: 268 HVQTDVLVQVKGPLLAACSSESRELCFAALCHVRQILHSLPGHFSSHYKKFFCSYSEPHY 327
Query: 795 VKLEKLDIMIRLASQANIAQV-----NYVV-------QEAIVVIKDIFRKYPNKYETIIS 842
+KL+K++++ L + N+ QV Y Q AI+ I I R Y ++ I++
Sbjct: 328 IKLQKVEVLCELVNDENVQQVLEELRGYCTDVSADFAQAAILAIGGIARTYTDQCVQILT 387
Query: 843 TLC----ENLDTLDEPEARASMIWIIGEYAERIDNA 874
L E++ T+ R ++W+ + E + A
Sbjct: 388 ELLGLRQEHITTVVVQTFR-DLVWLCPQCTEAVCQA 422
Score = 185 (70.2 bits), Expect = 6.9e-27, Sum P(3) = 6.9e-27
Identities = 40/114 (35%), Positives = 64/114 (56%)
Query: 290 PLVTLLSSEP-EVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRL 348
PL+ SSE E+ + AL ++ I+ P K FF Y++P Y+KL+K++++ L
Sbjct: 280 PLLAACSSESRELCFAALCHVRQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCEL 339
Query: 349 ASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI 402
+ N+ QVL EL+ Y T+V DF + A+ AIG A ++CV L +L+
Sbjct: 340 VNDENVQQVLEELRGYCTDVSADFAQAAILAIGGIA---RTYTDQCVQILTELL 390
Score = 166 (63.5 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 48/142 (33%), Positives = 76/142 (53%)
Query: 356 QVLSEL----KEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLD------LIQTK 405
Q+L+EL +E+ T V V R V +C V Q+ C + D LI
Sbjct: 384 QILTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCEENIQDSEGKQALIWLL 443
Query: 406 --YAERIDNADELLESFLEGFHDEN-TQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLAT 462
+ ERI NA +LE F+E E V+++LLTA+++LFL RP + Q+++ ++L
Sbjct: 444 GVHGERIPNAPYVLEDFVENVKSEAFPAVKMELLTALLRLFLSRPAECQDMLGRLLYYCI 503
Query: 463 QDSDNPDLRDRGFIYWRLLSTG 484
++ + +RDRG Y+RLL +G
Sbjct: 504 EEEKDMAVRDRGLFYYRLLLSG 525
Score = 162 (62.1 bits), Expect = 6.9e-27, Sum P(3) = 6.9e-27
Identities = 29/89 (32%), Positives = 54/89 (60%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
++ KDC D NP++R LA+R+M +R+ + EY+ +P+ L+D+ YVR+ A + A
Sbjct: 86 AINTLCKDCSDPNPMVRGLALRSMCSLRMPGVQEYIQQPILNGLRDKASYVRRVAVLGCA 145
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
K++++ D +++L LL D +P+
Sbjct: 146 KMHNLQGDSEVDGALVNELYSLLRDQDPI 174
Score = 135 (52.6 bits), Expect = 4.2e-24, Sum P(3) = 4.2e-24
Identities = 50/162 (30%), Positives = 76/162 (46%)
Query: 38 IASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQKSS 97
I MT G D+S +F ++V T ++ KKLVYLY+ YA PD+A++A +T K
Sbjct: 37 IRHMTQGLDMSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLC--KDC 94
Query: 98 SSFQCMIDIRSIPLFDLCS--SVGV-------FVKDCEDSNPLIRALAVRTMGCIRVDKI 148
S M+ R + L +CS GV + D +R +AV +GC ++ +
Sbjct: 95 SDPNPMV--RGLALRSMCSLRMPGVQEYIQQPILNGLRDKASYVRRVAV--LGCAKMHNL 150
Query: 149 ---TEY---LCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 184
+E L L L+D+DP V C+ L +I Q
Sbjct: 151 QGDSEVDGALVNELYSLLRDQDPIV---VVNCLRSLEEILKQ 189
Score = 91 (37.1 bits), Expect = 6.9e-27, Sum P(3) = 6.9e-27
Identities = 19/69 (27%), Positives = 36/69 (52%)
Query: 817 YVVQEAIVVIKDIFRKYPNKYETIISTL--CENLDTLDEPEARASMIWIIGEYAERIDNA 874
++ + +D+ P E + L CE + + + E + ++IW++G + ERI NA
Sbjct: 396 HITTVVVQTFRDLVWLCPQCTEAVCQALPGCE--ENIQDSEGKQALIWLLGVHGERIPNA 453
Query: 875 DELLESFLE 883
+LE F+E
Sbjct: 454 PYVLEDFVE 462
Score = 43 (20.2 bits), Expect = 3.5e-12, Sum P(3) = 3.5e-12
Identities = 22/85 (25%), Positives = 36/85 (42%)
Query: 386 KVEQSAERCVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLK 445
K++Q + V L Q + E + + LL+SFL+ +L + K F
Sbjct: 209 KLDQWGQAEVLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFLILAKKFPH 268
Query: 446 RPTDTQELVQQVLSLATQDSDNPDL 470
TD V+ L LA S++ +L
Sbjct: 269 VQTDVLVQVKGPL-LAACSSESREL 292
>UNIPROTKB|F1PTH0 [details] [associations]
symbol:AP4B1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM01020
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030131 Gene3D:3.30.310.10
InterPro:IPR012295 PANTHER:PTHR11134 GeneTree:ENSGT00530000063138
EMBL:AAEX03010988 EMBL:AAEX03010989 Ensembl:ENSCAFT00000014726
Uniprot:F1PTH0
Length = 903
Score = 484 (175.4 bits), Expect = 5.3e-43, P = 5.3e-43
Identities = 122/396 (30%), Positives = 207/396 (52%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VI MT G DVS +F ++V T ++ KKLVYLY+ YA PD+A++A+NT KDC
Sbjct: 201 VIRHMTQGLDVSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCS 260
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NP++R LA+R+M +R+ + EY+ +P+ L+D+ YVR+ A + AK+++++
Sbjct: 261 DPNPMVRGLALRSMCSLRMPGVQEYIQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSE 320
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
D +++L LL D +P+VV N + +L E+ + GV + N + LL + +
Sbjct: 321 VDGALVNELYSLLRDQDPIVVVNCLRSLEEILKQE-GGVVI---NKPIAHHLLNRMPKLD 376
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
+WGQ +L+ L Y P+ + E I + L ++ VV+ A K+ + L + P
Sbjct: 377 QWGQAEVLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFLILAKKFP---- 432
Query: 737 FVST-LTKKLAPPLVTLLSSEP-EVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIY 794
V T + ++ PL+ SSE E+ + AL ++ I+ P K FF Y++P Y
Sbjct: 433 HVQTDVLVQVKGPLLAACSSESRELCFAALCHVRQILHSLPGHFSSHYKKFFCSYSEPHY 492
Query: 795 VKLEKLDIMIRLASQANIAQV-----NYVV-------QEAIVVIKDIFRKYPNKYETIIS 842
+KL+K++++ L + N+ QV Y Q AI I I R Y ++ I++
Sbjct: 493 IKLQKVEVLCELVNDENVQQVLEELRGYCTDVSADFAQAAIFAIGGIARTYTDQCVQILT 552
Query: 843 TLC----ENLDTLDEPEARASMIWIIGEYAERIDNA 874
L E++ T+ R ++W+ + E + A
Sbjct: 553 ELLGLRQEHITTVVVQTFR-DLVWLCPQCTEAVCQA 587
Score = 184 (69.8 bits), Expect = 1.6e-26, Sum P(3) = 1.6e-26
Identities = 40/114 (35%), Positives = 64/114 (56%)
Query: 290 PLVTLLSSEP-EVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRL 348
PL+ SSE E+ + AL ++ I+ P K FF Y++P Y+KL+K++++ L
Sbjct: 445 PLLAACSSESRELCFAALCHVRQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCEL 504
Query: 349 ASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI 402
+ N+ QVL EL+ Y T+V DF + A+ AIG A ++CV L +L+
Sbjct: 505 VNDENVQQVLEELRGYCTDVSADFAQAAIFAIGGIA---RTYTDQCVQILTELL 555
Score = 165 (63.1 bits), Expect = 6.4e-20, Sum P(2) = 6.4e-20
Identities = 48/142 (33%), Positives = 75/142 (52%)
Query: 356 QVLSEL----KEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLD------LIQTK 405
Q+L+EL +E+ T V V R V +C V Q+ C + D LI
Sbjct: 549 QILTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCEENIQDSEGKQALIWLL 608
Query: 406 --YAERIDNADELLESFLEGFHDEN-TQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLAT 462
+ ERI NA +LE F+E E V+++LLTA+++LFL RP + Q+++ ++L
Sbjct: 609 GVHGERIPNAPYVLEDFVENVKSETFPAVKMELLTALLRLFLCRPAECQDMLGRLLHYCI 668
Query: 463 QDSDNPDLRDRGFIYWRLLSTG 484
++ + +RDRG Y+RLL G
Sbjct: 669 EEEKDMAVRDRGLFYYRLLLAG 690
Score = 163 (62.4 bits), Expect = 1.6e-26, Sum P(3) = 1.6e-26
Identities = 29/89 (32%), Positives = 55/89 (61%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
++ KDC D NP++R LA+R+M +R+ + EY+ +P+ L+D+ YVR+ A + A
Sbjct: 251 AINTLCKDCSDPNPMVRGLALRSMCSLRMPGVQEYIQQPILNGLRDKASYVRRVAVLGCA 310
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
K+++++ D +++L LL D +P+
Sbjct: 311 KMHNLHGDSEVDGALVNELYSLLRDQDPI 339
Score = 138 (53.6 bits), Expect = 6.2e-24, Sum P(3) = 6.2e-24
Identities = 51/162 (31%), Positives = 76/162 (46%)
Query: 38 IASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQKSS 97
I MT G DVS +F ++V T ++ KKLVYLY+ YA PD+A++A +T K
Sbjct: 202 IRHMTQGLDVSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLC--KDC 259
Query: 98 SSFQCMIDIRSIPLFDLCS--SVGV-------FVKDCEDSNPLIRALAVRTMGCIRVDKI 148
S M+ R + L +CS GV + D +R +AV +GC ++ +
Sbjct: 260 SDPNPMV--RGLALRSMCSLRMPGVQEYIQQPILNGLRDKASYVRRVAV--LGCAKMHNL 315
Query: 149 ---TEY---LCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 184
+E L L L+D+DP V C+ L +I Q
Sbjct: 316 HGDSEVDGALVNELYSLLRDQDPIV---VVNCLRSLEEILKQ 354
Score = 91 (37.1 bits), Expect = 1.6e-26, Sum P(3) = 1.6e-26
Identities = 19/69 (27%), Positives = 36/69 (52%)
Query: 817 YVVQEAIVVIKDIFRKYPNKYETIISTL--CENLDTLDEPEARASMIWIIGEYAERIDNA 874
++ + +D+ P E + L CE + + + E + ++IW++G + ERI NA
Sbjct: 561 HITTVVVQTFRDLVWLCPQCTEAVCQALPGCE--ENIQDSEGKQALIWLLGVHGERIPNA 618
Query: 875 DELLESFLE 883
+LE F+E
Sbjct: 619 PYVLEDFVE 627
Score = 43 (20.2 bits), Expect = 6.1e-12, Sum P(3) = 6.1e-12
Identities = 22/85 (25%), Positives = 36/85 (42%)
Query: 386 KVEQSAERCVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLK 445
K++Q + V L Q + E + + LL+SFL+ +L + K F
Sbjct: 374 KLDQWGQAEVLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFLILAKKFPH 433
Query: 446 RPTDTQELVQQVLSLATQDSDNPDL 470
TD V+ L LA S++ +L
Sbjct: 434 VQTDVLVQVKGPL-LAACSSESREL 457
>RGD|1310529 [details] [associations]
symbol:Ap4b1 "adaptor-related protein complex 4, beta 1 subunit"
species:10116 "Rattus norvegicus" [GO:0005802 "trans-Golgi network"
evidence=IEA;ISO] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR002553 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 RGD:1310529 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0005802 GO:GO:0030131 PANTHER:PTHR11134
GeneTree:ENSGT00530000063138 CTD:10717 KO:K12401 OrthoDB:EOG48KR9Z
OMA:EQFEKTW EMBL:CH474015 IPI:IPI00197290 RefSeq:NP_001101179.1
UniGene:Rn.8746 Ensembl:ENSRNOT00000026382 GeneID:310746
KEGG:rno:310746 UCSC:RGD:1310529 NextBio:662544 Uniprot:D4AD35
Length = 739
Score = 479 (173.7 bits), Expect = 6.8e-43, P = 6.8e-43
Identities = 119/396 (30%), Positives = 209/396 (52%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VI MT G D+S +F ++V T ++ KKLVYLY+ YA PD+A++A+NT KDC
Sbjct: 36 VIRHMTQGLDMSDVFMEMVKASATVDIVQKKLVYLYMGTYAPLKPDLALLAINTLCKDCS 95
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NP++R LA+R+M +R+ + EY+ +P+ L+D+ YVR+ A + AK+++++
Sbjct: 96 DPNPMVRGLALRSMCSLRMPGVQEYIQQPVVNGLRDKASYVRRVAVLGCAKMHNLHGDSE 155
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
D +++L LL D +P+VV N + +L E+ + GV + N + LL +++
Sbjct: 156 VDGALVNELYSLLRDQDPIVVVNCLRSLEEILKQE-GGVVI---NKPIAHHLLNRMSKLD 211
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
+WGQ +L+ L Y P+ + E I + L ++ VV+ A K+ + L + P
Sbjct: 212 QWGQAEVLNFLLRYQPRSEEELFDILNLLDSYLKSSSTGVVMGATKLFLILAKKFP---- 267
Query: 737 FVST-LTKKLAPPLVTLLSSEP-EVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIY 794
V T + ++ PL+ SSE E+ + AL ++ ++ P K FF Y++P Y
Sbjct: 268 HVQTDVLVRVKGPLLAACSSESRELCFAALCHVRQVLHSLPGHFSSHYKKFFCSYSEPHY 327
Query: 795 VKLEKLDIMIRLASQANIAQV-----NYVV-------QEAIVVIKDIFRKYPNKYETIIS 842
+KL+K++++ L + N+ QV Y Q AI I +I + Y ++ I++
Sbjct: 328 IKLQKVEVLCELVNDENVQQVLEELRGYCTDVSADFAQAAIFAIGNIAKTYTDQCVQILT 387
Query: 843 TLC----ENLDTLDEPEARASMIWIIGEYAERIDNA 874
L E++ T+ R ++W+ + E + A
Sbjct: 388 ELLGLRQEHITTVVVQTFR-DLVWLCPQCTEAVCQA 422
Score = 186 (70.5 bits), Expect = 1.4e-26, Sum P(3) = 1.4e-26
Identities = 39/114 (34%), Positives = 65/114 (57%)
Query: 290 PLVTLLSSEP-EVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRL 348
PL+ SSE E+ + AL ++ ++ P K FF Y++P Y+KL+K++++ L
Sbjct: 280 PLLAACSSESRELCFAALCHVRQVLHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCEL 339
Query: 349 ASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI 402
+ N+ QVL EL+ Y T+V DF + A+ AIG A + ++CV L +L+
Sbjct: 340 VNDENVQQVLEELRGYCTDVSADFAQAAIFAIGNIA---KTYTDQCVQILTELL 390
Score = 163 (62.4 bits), Expect = 9.9e-20, Sum P(2) = 9.9e-20
Identities = 47/142 (33%), Positives = 75/142 (52%)
Query: 356 QVLSEL----KEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLD------LIQTK 405
Q+L+EL +E+ T V V R V +C V Q+ C + D LI
Sbjct: 384 QILTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCEENIQDSEGKQALIWLL 443
Query: 406 --YAERIDNADELLESFLEGFHDEN-TQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLAT 462
+ E+I NA +LE F+E E V+++LLTA+++LFL RP + Q+++ ++L
Sbjct: 444 GVHGEKIPNAPYVLEDFVESVKSETFPAVKMELLTALMRLFLSRPAECQDVLGRLLLYCI 503
Query: 463 QDSDNPDLRDRGFIYWRLLSTG 484
++ + +RDRG Y+RLL G
Sbjct: 504 EEEKDMAVRDRGLFYYRLLLVG 525
Score = 161 (61.7 bits), Expect = 1.4e-26, Sum P(3) = 1.4e-26
Identities = 29/89 (32%), Positives = 55/89 (61%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
++ KDC D NP++R LA+R+M +R+ + EY+ +P+ L+D+ YVR+ A + A
Sbjct: 86 AINTLCKDCSDPNPMVRGLALRSMCSLRMPGVQEYIQQPVVNGLRDKASYVRRVAVLGCA 145
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
K+++++ D +++L LL D +P+
Sbjct: 146 KMHNLHGDSEVDGALVNELYSLLRDQDPI 174
Score = 133 (51.9 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 51/162 (31%), Positives = 76/162 (46%)
Query: 38 IASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQKSS 97
I MT G D+S +F ++V T ++ KKLVYLY+ YA PD+A++A +T K
Sbjct: 37 IRHMTQGLDMSDVFMEMVKASATVDIVQKKLVYLYMGTYAPLKPDLALLAINTLC--KDC 94
Query: 98 SSFQCMIDIRSIPLFDLCS--SVGV-------FVKDCEDSNPLIRALAVRTMGCIRVDKI 148
S M+ R + L +CS GV V D +R +AV +GC ++ +
Sbjct: 95 SDPNPMV--RGLALRSMCSLRMPGVQEYIQQPVVNGLRDKASYVRRVAV--LGCAKMHNL 150
Query: 149 ---TEY---LCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 184
+E L L L+D+DP V C+ L +I Q
Sbjct: 151 HGDSEVDGALVNELYSLLRDQDPIV---VVNCLRSLEEILKQ 189
Score = 88 (36.0 bits), Expect = 1.4e-26, Sum P(3) = 1.4e-26
Identities = 18/69 (26%), Positives = 36/69 (52%)
Query: 817 YVVQEAIVVIKDIFRKYPNKYETIISTL--CENLDTLDEPEARASMIWIIGEYAERIDNA 874
++ + +D+ P E + L CE + + + E + ++IW++G + E+I NA
Sbjct: 396 HITTVVVQTFRDLVWLCPQCTEAVCQALPGCE--ENIQDSEGKQALIWLLGVHGEKIPNA 453
Query: 875 DELLESFLE 883
+LE F+E
Sbjct: 454 PYVLEDFVE 462
Score = 40 (19.1 bits), Expect = 1.8e-11, Sum P(3) = 1.8e-11
Identities = 21/85 (24%), Positives = 36/85 (42%)
Query: 386 KVEQSAERCVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLK 445
K++Q + V L Q + E + + LL+S+L+ +L + K F
Sbjct: 209 KLDQWGQAEVLNFLLRYQPRSEEELFDILNLLDSYLKSSSTGVVMGATKLFLILAKKFPH 268
Query: 446 RPTDTQELVQQVLSLATQDSDNPDL 470
TD V+ L LA S++ +L
Sbjct: 269 VQTDVLVRVKGPL-LAACSSESREL 292
>MGI|MGI:1337130 [details] [associations]
symbol:Ap4b1 "adaptor-related protein complex AP-4, beta 1"
species:10090 "Mus musculus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=IDA;TAS]
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=TAS] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR015151 InterPro:IPR016024 InterPro:IPR016342
InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066 PIRSF:PIRSF002291
SMART:SM01020 MGI:MGI:1337130 GO:GO:0005794 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0005802 eggNOG:COG5096 GO:GO:0030131
Gene3D:3.30.310.10 InterPro:IPR012295 PANTHER:PTHR11134
GeneTree:ENSGT00530000063138 CTD:10717 HOGENOM:HOG000294128
HOVERGEN:HBG050521 KO:K12401 OrthoDB:EOG48KR9Z EMBL:AF155157
EMBL:AC124698 EMBL:CU210953 IPI:IPI00125391 RefSeq:NP_001157024.1
RefSeq:NP_080469.2 UniGene:Mm.197568 ProteinModelPortal:Q9WV76
STRING:Q9WV76 PhosphoSite:Q9WV76 PaxDb:Q9WV76 PRIDE:Q9WV76
Ensembl:ENSMUST00000047285 Ensembl:ENSMUST00000076599 GeneID:67489
KEGG:mmu:67489 InParanoid:Q9WV76 OMA:EQFEKTW ChiTaRS:AP4B1
NextBio:324726 CleanEx:MM_AP4B1 Genevestigator:Q9WV76
GermOnline:ENSMUSG00000032952 Uniprot:Q9WV76
Length = 738
Score = 478 (173.3 bits), Expect = 8.8e-43, P = 8.8e-43
Identities = 119/396 (30%), Positives = 208/396 (52%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VI MT G D+S +F ++V T ++ KKLVYLY+ YA PD+A++A+NT KDC
Sbjct: 36 VIRHMTQGLDMSDVFMEMVKASATVDIVQKKLVYLYMGTYAPLKPDLALLAINTLCKDCS 95
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NP++R LA+R+M +R+ + EY+ +P+ L+D+ YVR+ A + AK+++++
Sbjct: 96 DPNPMVRGLALRSMCSLRMPGVQEYIQQPVVNGLRDKASYVRRVAVLGCAKMHNLHGDSE 155
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
D +++L LL D +P+VV N + +L E+ + GV + N + LL +++
Sbjct: 156 VDGALVNELYSLLRDQDPIVVVNCLRSLEEILKQE-GGVVI---NKPIAHHLLNRMSKLD 211
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
+WGQ +L+ L Y P+ + E I + L ++ VV+ A K+ + L + P
Sbjct: 212 QWGQAEVLNFLLRYQPRSEEELFDILNLLDSYLKSSSTGVVMGATKLFLILAKKFP---- 267
Query: 737 FVST-LTKKLAPPLVTLLSSEP-EVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIY 794
V T + ++ PL+ SSE E+ + AL ++ ++ P K FF Y++P Y
Sbjct: 268 HVQTDVLVRVKGPLLAACSSESRELCFAALCHVRQVLHSLPGHFSSHYKKFFCSYSEPHY 327
Query: 795 VKLEKLDIMIRLASQANIAQV-----NYVV-------QEAIVVIKDIFRKYPNKYETIIS 842
+KL+K++++ L + N+ QV Y Q AI I I + Y ++ I++
Sbjct: 328 IKLQKVEVLCELVNDENVQQVLEELRGYCTDVAADFAQAAIFAIGSIAKTYTDQCVQILT 387
Query: 843 TLC----ENLDTLDEPEARASMIWIIGEYAERIDNA 874
L E++ T+ R ++W+ + E + A
Sbjct: 388 ELLGLRQEHITTVVVQTFR-DLVWLCPQCTEAVCQA 422
Score = 183 (69.5 bits), Expect = 6.0e-26, Sum P(3) = 6.0e-26
Identities = 39/114 (34%), Positives = 65/114 (57%)
Query: 290 PLVTLLSSEP-EVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRL 348
PL+ SSE E+ + AL ++ ++ P K FF Y++P Y+KL+K++++ L
Sbjct: 280 PLLAACSSESRELCFAALCHVRQVLHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCEL 339
Query: 349 ASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI 402
+ N+ QVL EL+ Y T+V DF + A+ AIG A + ++CV L +L+
Sbjct: 340 VNDENVQQVLEELRGYCTDVAADFAQAAIFAIGSIA---KTYTDQCVQILTELL 390
Score = 161 (61.7 bits), Expect = 6.0e-26, Sum P(3) = 6.0e-26
Identities = 29/89 (32%), Positives = 55/89 (61%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
++ KDC D NP++R LA+R+M +R+ + EY+ +P+ L+D+ YVR+ A + A
Sbjct: 86 AINTLCKDCSDPNPMVRGLALRSMCSLRMPGVQEYIQQPVVNGLRDKASYVRRVAVLGCA 145
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
K+++++ D +++L LL D +P+
Sbjct: 146 KMHNLHGDSEVDGALVNELYSLLRDQDPI 174
Score = 155 (59.6 bits), Expect = 6.8e-19, Sum P(2) = 6.8e-19
Identities = 45/142 (31%), Positives = 74/142 (52%)
Query: 356 QVLSEL----KEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLD------LIQTK 405
Q+L+EL +E+ T V V R V +C V Q+ C + D LI
Sbjct: 384 QILTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCEENIQDSEGKQALIWLL 443
Query: 406 --YAERIDNADELLESFLEGFHDEN-TQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLAT 462
+ E+I NA +LE F++ E V+++LLTA+++L L RP + Q+++ ++L
Sbjct: 444 GVHGEKIPNAPYVLEDFVDNVKSETFPAVKMELLTALMRLVLSRPAECQDMLGRLLHYCI 503
Query: 463 QDSDNPDLRDRGFIYWRLLSTG 484
++ + +RDRG Y+RLL G
Sbjct: 504 EEEKDMAVRDRGLFYYRLLLVG 525
Score = 133 (51.9 bits), Expect = 4.7e-23, Sum P(3) = 4.7e-23
Identities = 51/162 (31%), Positives = 76/162 (46%)
Query: 38 IASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQKSS 97
I MT G D+S +F ++V T ++ KKLVYLY+ YA PD+A++A +T K
Sbjct: 37 IRHMTQGLDMSDVFMEMVKASATVDIVQKKLVYLYMGTYAPLKPDLALLAINTLC--KDC 94
Query: 98 SSFQCMIDIRSIPLFDLCS--SVGV-------FVKDCEDSNPLIRALAVRTMGCIRVDKI 148
S M+ R + L +CS GV V D +R +AV +GC ++ +
Sbjct: 95 SDPNPMV--RGLALRSMCSLRMPGVQEYIQQPVVNGLRDKASYVRRVAV--LGCAKMHNL 150
Query: 149 ---TEY---LCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 184
+E L L L+D+DP V C+ L +I Q
Sbjct: 151 HGDSEVDGALVNELYSLLRDQDPIV---VVNCLRSLEEILKQ 189
Score = 85 (35.0 bits), Expect = 6.0e-26, Sum P(3) = 6.0e-26
Identities = 17/69 (24%), Positives = 36/69 (52%)
Query: 817 YVVQEAIVVIKDIFRKYPNKYETIISTL--CENLDTLDEPEARASMIWIIGEYAERIDNA 874
++ + +D+ P E + L CE + + + E + ++IW++G + E+I NA
Sbjct: 396 HITTVVVQTFRDLVWLCPQCTEAVCQALPGCE--ENIQDSEGKQALIWLLGVHGEKIPNA 453
Query: 875 DELLESFLE 883
+LE F++
Sbjct: 454 PYVLEDFVD 462
Score = 46 (21.3 bits), Expect = 6.3e-22, Sum P(3) = 6.3e-22
Identities = 18/78 (23%), Positives = 35/78 (44%)
Query: 513 DVVNCMQTDNLELKKLVYLY-LMNYAKSHP----DMAIMAVNTFVKDCEDSNPLIRALAV 567
D V+ ++++ K+ L LM S P DM ++ +++ +D R L
Sbjct: 459 DFVDNVKSETFPAVKMELLTALMRLVLSRPAECQDMLGRLLHYCIEEEKDMAVRDRGLFY 518
Query: 568 RTMGCIRVDKITEYLCEP 585
+ + +DK+ + LC P
Sbjct: 519 YRLLLVGIDKVKQILCSP 536
Score = 40 (19.1 bits), Expect = 3.7e-11, Sum P(3) = 3.7e-11
Identities = 21/85 (24%), Positives = 36/85 (42%)
Query: 386 KVEQSAERCVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLK 445
K++Q + V L Q + E + + LL+S+L+ +L + K F
Sbjct: 209 KLDQWGQAEVLNFLLRYQPRSEEELFDILNLLDSYLKSSSTGVVMGATKLFLILAKKFPH 268
Query: 446 RPTDTQELVQQVLSLATQDSDNPDL 470
TD V+ L LA S++ +L
Sbjct: 269 VQTDVLVRVKGPL-LAACSSESREL 292
>ZFIN|ZDB-GENE-040426-1284 [details] [associations]
symbol:ap4b1 "adaptor-related protein complex 4,
beta 1 subunit" species:7955 "Danio rerio" [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0030117 "membrane coat"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
InterPro:IPR002553 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 ZFIN:ZDB-GENE-040426-1284
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 eggNOG:COG5096 GO:GO:0030131
PANTHER:PTHR11134 CTD:10717 HOGENOM:HOG000294128 HOVERGEN:HBG050521
KO:K12401 OrthoDB:EOG48KR9Z EMBL:BC053128 IPI:IPI00488851
RefSeq:NP_956632.1 UniGene:Dr.80194 ProteinModelPortal:Q7T3G3
STRING:Q7T3G3 PRIDE:Q7T3G3 GeneID:393309 KEGG:dre:393309
NextBio:20814361 ArrayExpress:Q7T3G3 Bgee:Q7T3G3 Uniprot:Q7T3G3
Length = 729
Score = 476 (172.6 bits), Expect = 1.3e-42, P = 1.3e-42
Identities = 120/366 (32%), Positives = 195/366 (53%)
Query: 492 HLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTF 551
++T+ VI MT G DVSALF D+V T ++ KKLVYLY+ YA PD+A++A+NT
Sbjct: 32 YITK-VIRYMTQGLDVSALFMDMVKASATVDIVQKKLVYLYMCTYASDKPDLALLAINTL 90
Query: 552 VKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDI 611
KDC D NP++R LA+R M R+ +TEY+ +P+ L+D+ YVR+ A + AK++ +
Sbjct: 91 RKDCADPNPMVRGLALRNMCNFRMPGMTEYIEQPIVAGLRDKASYVRRVAVLGCAKMHSL 150
Query: 612 NAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTA 671
+ D +++L LL D +P+VV N + AL ++ + GV + N + LL
Sbjct: 151 QPRTEIDGSLVNELYALLRDPDPVVVVNCLRALEDILK-DEGGVVI---NKPIAHHLLNR 206
Query: 672 LNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEML 731
L + W Q +L L Y P++D E I + P L + + V +S +++ + L
Sbjct: 207 LKDLDCWAQSEVLTFLLRYRPRNDDELFDILSLLDPFLQSSQSHVAISTLRLFLHLAAAH 266
Query: 732 PG-EGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYN 790
P + D L AP L T ++ E+++ L +I +++ +P + K FF Y+
Sbjct: 267 PAVQAD---ALLCSSAPLLATCGAASRELRFAGLCHIQQVMRSQPALFNTHYKRFFCGYS 323
Query: 791 DPIYVKLEKLDIMIRLASQANIAQV-----NY-------VVQEAIVVIKDIFRKYPNKYE 838
+P Y+K K++I++ L + N+A V +Y + Q AI I I R Y K
Sbjct: 324 EPSYIKFRKMEILVALVNDENVALVLEEMKSYCTDVSAELAQAAIAAIGRIGRTYSEKCL 383
Query: 839 TIISTL 844
I++ L
Sbjct: 384 DILTGL 389
Score = 186 (70.5 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 40/133 (30%), Positives = 75/133 (56%)
Query: 288 APPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIR 347
AP L T ++ E+++ L +I +++ +P + K FF Y++P Y+K K++I++
Sbjct: 279 APLLATCGAASRELRFAGLCHIQQVMRSQPALFNTHYKRFFCGYSEPSYIKFRKMEILVA 338
Query: 348 LASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKYA 407
L + N+A VL E+K Y T+V + + A+ AIGR +E+C+ L L+ K
Sbjct: 339 LVNDENVALVLEEMKSYCTDVSAELAQAAIAAIGRIG---RTYSEKCLDILTGLLALKQ- 394
Query: 408 ERIDNADELLESF 420
+ I +A ++++F
Sbjct: 395 DHITSA--VIQTF 405
Score = 154 (59.3 bits), Expect = 9.9e-18, Sum P(2) = 9.9e-18
Identities = 39/138 (28%), Positives = 77/138 (55%)
Query: 357 VLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVS---------TLLDLIQTKYA 407
+L+ +++ T + R V +C V + E CV LL L+ ++A
Sbjct: 389 LLALKQDHITSAVIQTFRDLVWFCPQCTAAVCLTVESCVDYPQDSEGKQALLWLLG-EHA 447
Query: 408 ERIDNADELLESFLEGFHDE-NTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQDSD 466
++I +A LLE +++G E + +++++LTA +K+FL+RP +TQ+++ ++L ++
Sbjct: 448 DQISSAPYLLEVYIDGLKTELSAALKMEILTAALKMFLRRPAETQDMLGRLLHYCIEEES 507
Query: 467 NPDLRDRGFIYWRLLSTG 484
+ +RDR +Y+RLL G
Sbjct: 508 DMCVRDRALLYYRLLQRG 525
Score = 151 (58.2 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 30/89 (33%), Positives = 53/89 (59%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
++ KDC D NP++R LA+R M R+ +TEY+ +P+ L+D+ YVR+ A + A
Sbjct: 86 AINTLRKDCADPNPMVRGLALRNMCNFRMPGMTEYIEQPIVAGLRDKASYVRRVAVLGCA 145
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
K++ + + D +++L LL D +P+
Sbjct: 146 KMHSLQPRTEIDGSLVNELYALLRDPDPV 174
Score = 151 (58.2 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
Identities = 55/168 (32%), Positives = 82/168 (48%)
Query: 38 IASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQKSS 97
I MT G DVSALF D+V T ++ KKLVYLY+ YA PD+A++A +T +K
Sbjct: 37 IRYMTQGLDVSALFMDMVKASATVDIVQKKLVYLYMCTYASDKPDLALLAINTL--RKDC 94
Query: 98 SSFQCMIDIRSIPLFDLCS--SVGV-------FVKDCEDSNPLIRALAVRTMGCIRVDKI 148
+ M+ R + L ++C+ G+ V D +R +AV +GC ++ +
Sbjct: 95 ADPNPMV--RGLALRNMCNFRMPGMTEYIEQPIVAGLRDKASYVRRVAV--LGCAKMHSL 150
Query: 149 ---TEY---LCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQG 190
TE L L L+D DP V C+ L DI ++D+G
Sbjct: 151 QPRTEIDGSLVNELYALLRDPDPVV---VVNCLRALEDI----LKDEG 191
Score = 83 (34.3 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 22/87 (25%), Positives = 47/87 (54%)
Query: 798 EK-LDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEA 856
EK LDI+ L + + Q +++ I +D+ P + T+ +D + E
Sbjct: 380 EKCLDILTGLLA---LKQ-DHITSAVIQTFRDLVWFCPQCTAAVCLTVESCVDYPQDSEG 435
Query: 857 RASMIWIIGEYAERIDNADELLESFLE 883
+ +++W++GE+A++I +A LLE +++
Sbjct: 436 KQALLWLLGEHADQISSAPYLLEVYID 462
>DICTYBASE|DDB_G0274003 [details] [associations]
symbol:ap3b-2 "beta adaptin" species:44689
"Dictyostelium discoideum" [GO:0030123 "AP-3 adaptor complex"
evidence=IEA;IDA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 dictyBase:DDB_G0274003
dictyBase:DDB_G0272578 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0006897
GenomeReviews:CM000151_GR GO:GO:0010008 EMBL:AAFI02000011
EMBL:AAFI02000009 eggNOG:COG5096 PANTHER:PTHR11134 KO:K12397
GO:GO:0030123 PANTHER:PTHR11134:SF1 RefSeq:XP_644360.1
RefSeq:XP_645054.1 ProteinModelPortal:Q556J8 STRING:Q556J8
PRIDE:Q556J8 EnsemblProtists:DDB0237724 EnsemblProtists:DDB0238781
GeneID:8618729 GeneID:8619247 KEGG:ddi:DDB_G0272578
KEGG:ddi:DDB_G0274003 OMA:FSDEHES ProtClustDB:CLSZ2729218
Uniprot:Q556J8
Length = 1108
Score = 329 (120.9 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 75/201 (37%), Positives = 119/201 (59%)
Query: 491 LHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNT 550
L + +IA ++ G+DVS FP VV + NLE+KKLVY+YL++YA+S D A++++NT
Sbjct: 39 LESMKKLIAMLSKGRDVSEAFPQVVKNVIVKNLEIKKLVYMYLVHYAESQNDSALLSINT 98
Query: 551 FVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYD 610
K D + +IRA A+R M IRV I E + + K +KD P+VRK AA +AK++
Sbjct: 99 IQKSLNDQSQVIRASALRVMSSIRVIDIIEVIILAIEKSVKDTSPFVRKAAAFAIAKVHK 158
Query: 611 INAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLT 670
++ + + +D L+ LL+D++ MV+ A+ A NE L+ + + I +LL
Sbjct: 159 LDCD--KQEPLIDLLEILLNDTSTMVLGAAIVAF---NELCPQRFDLLHQHYRKICQLLA 213
Query: 671 ALNECTEWGQVFILDSLSNYS 691
+E W QV +LD L+ Y+
Sbjct: 214 DFDE---WSQVIVLDILTKYA 231
Score = 230 (86.0 bits), Expect = 4.2e-35, Sum P(3) = 4.2e-35
Identities = 49/122 (40%), Positives = 72/122 (59%)
Query: 285 KKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIY-VKLEKLD 343
+K+ LV +L S PEVQY+ L NI+ +V RP + + + FF+ +DP Y +KL KL+
Sbjct: 330 QKVGKSLVRILRSGPEVQYITLTNISTMVTLRPSMFEPHLSEFFIHSSDPEYSIKL-KLE 388
Query: 344 IMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 403
I+ RLA+ NI ++L E KEY D FV ++AIG CA V E C+ L+ L+
Sbjct: 389 ILTRLATPENIGKILKEFKEYVKNEDKKFVAATIQAIGSCASTVPDVTESCIYGLMSLLS 448
Query: 404 TK 405
+
Sbjct: 449 NQ 450
Score = 186 (70.5 bits), Expect = 4.2e-35, Sum P(3) = 4.2e-35
Identities = 60/191 (31%), Positives = 95/191 (49%)
Query: 1 MTDSKYFT-TTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQ 59
+ S+YF +T +I E+K L+S IA ++ G+DVS FP VV +
Sbjct: 8 INQSRYFNDSTANTKIEEIKKHLDSPSDADKLESMKKLIAMLSKGRDVSEAFPQVVKNVI 67
Query: 60 TDNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQKS---------SSSFQCMIDIRSIP 110
NLE+KKLVY+YL++YA+S D A+++ +T QKS +S+ + M IR I
Sbjct: 68 VKNLEIKKLVYMYLVHYAESQNDSALLSINTI--QKSLNDQSQVIRASALRVMSSIRVID 125
Query: 111 LFDLCSSVGVFVKDCEDSNPLIR---ALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYV 167
+ ++ + K +D++P +R A A+ + + DK E L + L L D V
Sbjct: 126 IIEVI--ILAIEKSVKDTSPFVRKAAAFAIAKVHKLDCDK-QEPLIDLLEILLNDTSTMV 182
Query: 168 RKTAAVCVAKL 178
A V +L
Sbjct: 183 LGAAIVAFNEL 193
Score = 144 (55.7 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 44/126 (34%), Positives = 67/126 (53%)
Query: 691 SPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLV 750
S + D + + + + P L N AVV+ AV L P S +K+ LV
Sbjct: 287 SEEIDMDHRLLLKSTLPLLQSRNNAVVM-AVSSLY--FYCAP------SIEAQKVGKSLV 337
Query: 751 TLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIY-VKLEKLDIMIRLASQ 809
+L S PEVQY+ L NI+ +V RP + + + FF+ +DP Y +KL KL+I+ RLA+
Sbjct: 338 RILRSGPEVQYITLTNISTMVTLRPSMFEPHLSEFFIHSSDPEYSIKL-KLEILTRLATP 396
Query: 810 ANIAQV 815
NI ++
Sbjct: 397 ENIGKI 402
Score = 138 (53.6 bits), Expect = 4.0e-30, Sum P(3) = 4.0e-30
Identities = 31/89 (34%), Positives = 51/89 (57%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ K D + +IRA A+R M IRV I E + + K +KD P+VRK AA +A
Sbjct: 95 SINTIQKSLNDQSQVIRASALRVMSSIRVIDIIEVIILAIEKSVKDTSPFVRKAAAFAIA 154
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
K++ ++ + + +D L+ LL+D++ M
Sbjct: 155 KVHKLDCD--KQEPLIDLLEILLNDTSTM 181
Score = 106 (42.4 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 836 KYETIISTLCENLDTLDEPEARASMIWIIGEYAERI 871
KY+ II L + LDTL P ARAS++W+IGEY R+
Sbjct: 506 KYDNIILHLSKLLDTLQVPSARASIVWVIGEYCYRV 541
Score = 52 (23.4 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 20/69 (28%), Positives = 33/69 (47%)
Query: 312 IVQKRPDILKHEMKVFFVKYNDPIYVKLEKL-DIMIRLASQANIAQVLSELKEYATEVDV 370
+ + + I KH +KY D I + L KL D + +++A+I V+ E V
Sbjct: 488 VKENQSTISKHSSSNNSIKY-DNIILHLSKLLDTLQVPSARASIVWVIGEYCYRVPLVAP 546
Query: 371 DFVRKAVRA 379
D RK V++
Sbjct: 547 DVFRKLVKS 555
Score = 47 (21.6 bits), Expect = 5.4e-16, Sum P(3) = 5.4e-16
Identities = 22/85 (25%), Positives = 39/85 (45%)
Query: 584 EPLRKCLKDEDPYVRKTAAVCVAK-LYDIN--AQLVED--QGFLDQLKDLLSDSNPMVVA 638
E + K LK+ YV+ VA + I A V D + + L LLS+ + +VVA
Sbjct: 397 ENIGKILKEFKEYVKNEDKKFVAATIQAIGSCASTVPDVTESCIYGLMSLLSNQSTVVVA 456
Query: 639 NAVAALSEMNEASTSGVALIEMNAQ 663
+V L + + + + L ++ +
Sbjct: 457 ESVIVLKRLLQLNATNEKLEKLEKE 481
Score = 46 (21.3 bits), Expect = 7.0e-29, Sum P(3) = 7.0e-29
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 405 KYAERIDN-ADELLESFLEGFHDENTQVQLQLLTAIVKLFLK 445
+Y R+ A ++ ++ F DE+ V+L+ L KL+++
Sbjct: 536 EYCYRVPLVAPDVFRKLVKSFSDEHESVKLETLNLGSKLYVQ 577
Score = 46 (21.3 bits), Expect = 7.0e-29, Sum P(3) = 7.0e-29
Identities = 20/74 (27%), Positives = 29/74 (39%)
Query: 560 PLIRALAVRTMG--CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLY----DINA 613
P RA V +G C RV + + L K DE V+ +KLY D N+
Sbjct: 524 PSARASIVWVIGEYCYRVPLVAPDVFRKLVKSFSDEHESVKLETLNLGSKLYVQFTDNNS 583
Query: 614 QLVEDQGFLDQLKD 627
D ++ K+
Sbjct: 584 TTTTDNSIPNEFKN 597
Score = 46 (21.3 bits), Expect = 6.8e-16, Sum P(3) = 6.8e-16
Identities = 55/276 (19%), Positives = 113/276 (40%)
Query: 354 IAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKYAERIDNA 413
I Q+L++ E++ + +D + K R+ RC ++ + ++ Y++ D
Sbjct: 208 ICQLLADFDEWSQVIVLDILTKYARSQFRCPDSTMN--DKNIKQFKKKSKSFYSDEEDQE 265
Query: 414 DELLESFL-------EGFHDENTQVQLQ---LLTAIVKLFLKRPTDTQELVQQVLSLATQ 463
D+ E+ L D + ++ + LL + + L R +V V SL
Sbjct: 266 DDEPENSLYKKKPLERDMFDSSEEIDMDHRLLLKSTLPLLQSR---NNAVVMAVSSLYFY 322
Query: 464 DSDNPDLRDRGFIYWRLLSTG-NTFYILL-HLTRLVIASMTVGKD-VSALFPDVVNCMQT 520
+ + + + G R+L +G YI L +++ +V ++ + +S F + +
Sbjct: 323 CAPSIEAQKVGKSLVRILRSGPEVQYITLTNISTMVTLRPSMFEPHLSEFFIHSSDPEYS 382
Query: 521 DNLELKKLVYLYLM-NYAKSHPDMAIMAVNTFVKDCEDSNPLIRALAVRTMG-CIR-VDK 577
L+L+ L L N K + +VK+ ED + A ++ +G C V
Sbjct: 383 IKLKLEILTRLATPENIGK-----ILKEFKEYVKN-EDKKFV--AATIQAIGSCASTVPD 434
Query: 578 ITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINA 613
+TE L L ++ V + + + +L +NA
Sbjct: 435 VTESCIYGLMSLLSNQSTVVVAESVIVLKRLLQLNA 470
Score = 39 (18.8 bits), Expect = 3.7e-28, Sum P(3) = 3.7e-28
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 426 DENTQVQLQLL 436
DEN VQ+QLL
Sbjct: 1066 DENIYVQIQLL 1076
>DICTYBASE|DDB_G0272578 [details] [associations]
symbol:ap3b-1 "beta adaptin" species:44689
"Dictyostelium discoideum" [GO:0030123 "AP-3 adaptor complex"
evidence=IEA;IDA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 dictyBase:DDB_G0274003
dictyBase:DDB_G0272578 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0006897
GenomeReviews:CM000151_GR GO:GO:0010008 EMBL:AAFI02000011
EMBL:AAFI02000009 eggNOG:COG5096 PANTHER:PTHR11134 KO:K12397
GO:GO:0030123 PANTHER:PTHR11134:SF1 RefSeq:XP_644360.1
RefSeq:XP_645054.1 ProteinModelPortal:Q556J8 STRING:Q556J8
PRIDE:Q556J8 EnsemblProtists:DDB0237724 EnsemblProtists:DDB0238781
GeneID:8618729 GeneID:8619247 KEGG:ddi:DDB_G0272578
KEGG:ddi:DDB_G0274003 OMA:FSDEHES ProtClustDB:CLSZ2729218
Uniprot:Q556J8
Length = 1108
Score = 329 (120.9 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 75/201 (37%), Positives = 119/201 (59%)
Query: 491 LHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNT 550
L + +IA ++ G+DVS FP VV + NLE+KKLVY+YL++YA+S D A++++NT
Sbjct: 39 LESMKKLIAMLSKGRDVSEAFPQVVKNVIVKNLEIKKLVYMYLVHYAESQNDSALLSINT 98
Query: 551 FVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYD 610
K D + +IRA A+R M IRV I E + + K +KD P+VRK AA +AK++
Sbjct: 99 IQKSLNDQSQVIRASALRVMSSIRVIDIIEVIILAIEKSVKDTSPFVRKAAAFAIAKVHK 158
Query: 611 INAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLT 670
++ + + +D L+ LL+D++ MV+ A+ A NE L+ + + I +LL
Sbjct: 159 LDCD--KQEPLIDLLEILLNDTSTMVLGAAIVAF---NELCPQRFDLLHQHYRKICQLLA 213
Query: 671 ALNECTEWGQVFILDSLSNYS 691
+E W QV +LD L+ Y+
Sbjct: 214 DFDE---WSQVIVLDILTKYA 231
Score = 230 (86.0 bits), Expect = 4.2e-35, Sum P(3) = 4.2e-35
Identities = 49/122 (40%), Positives = 72/122 (59%)
Query: 285 KKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIY-VKLEKLD 343
+K+ LV +L S PEVQY+ L NI+ +V RP + + + FF+ +DP Y +KL KL+
Sbjct: 330 QKVGKSLVRILRSGPEVQYITLTNISTMVTLRPSMFEPHLSEFFIHSSDPEYSIKL-KLE 388
Query: 344 IMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQ 403
I+ RLA+ NI ++L E KEY D FV ++AIG CA V E C+ L+ L+
Sbjct: 389 ILTRLATPENIGKILKEFKEYVKNEDKKFVAATIQAIGSCASTVPDVTESCIYGLMSLLS 448
Query: 404 TK 405
+
Sbjct: 449 NQ 450
Score = 186 (70.5 bits), Expect = 4.2e-35, Sum P(3) = 4.2e-35
Identities = 60/191 (31%), Positives = 95/191 (49%)
Query: 1 MTDSKYFT-TTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQ 59
+ S+YF +T +I E+K L+S IA ++ G+DVS FP VV +
Sbjct: 8 INQSRYFNDSTANTKIEEIKKHLDSPSDADKLESMKKLIAMLSKGRDVSEAFPQVVKNVI 67
Query: 60 TDNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQKS---------SSSFQCMIDIRSIP 110
NLE+KKLVY+YL++YA+S D A+++ +T QKS +S+ + M IR I
Sbjct: 68 VKNLEIKKLVYMYLVHYAESQNDSALLSINTI--QKSLNDQSQVIRASALRVMSSIRVID 125
Query: 111 LFDLCSSVGVFVKDCEDSNPLIR---ALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYV 167
+ ++ + K +D++P +R A A+ + + DK E L + L L D V
Sbjct: 126 IIEVI--ILAIEKSVKDTSPFVRKAAAFAIAKVHKLDCDK-QEPLIDLLEILLNDTSTMV 182
Query: 168 RKTAAVCVAKL 178
A V +L
Sbjct: 183 LGAAIVAFNEL 193
Score = 144 (55.7 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 44/126 (34%), Positives = 67/126 (53%)
Query: 691 SPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLV 750
S + D + + + + P L N AVV+ AV L P S +K+ LV
Sbjct: 287 SEEIDMDHRLLLKSTLPLLQSRNNAVVM-AVSSLY--FYCAP------SIEAQKVGKSLV 337
Query: 751 TLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIY-VKLEKLDIMIRLASQ 809
+L S PEVQY+ L NI+ +V RP + + + FF+ +DP Y +KL KL+I+ RLA+
Sbjct: 338 RILRSGPEVQYITLTNISTMVTLRPSMFEPHLSEFFIHSSDPEYSIKL-KLEILTRLATP 396
Query: 810 ANIAQV 815
NI ++
Sbjct: 397 ENIGKI 402
Score = 138 (53.6 bits), Expect = 4.0e-30, Sum P(3) = 4.0e-30
Identities = 31/89 (34%), Positives = 51/89 (57%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ K D + +IRA A+R M IRV I E + + K +KD P+VRK AA +A
Sbjct: 95 SINTIQKSLNDQSQVIRASALRVMSSIRVIDIIEVIILAIEKSVKDTSPFVRKAAAFAIA 154
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
K++ ++ + + +D L+ LL+D++ M
Sbjct: 155 KVHKLDCD--KQEPLIDLLEILLNDTSTM 181
Score = 106 (42.4 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 836 KYETIISTLCENLDTLDEPEARASMIWIIGEYAERI 871
KY+ II L + LDTL P ARAS++W+IGEY R+
Sbjct: 506 KYDNIILHLSKLLDTLQVPSARASIVWVIGEYCYRV 541
Score = 52 (23.4 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 20/69 (28%), Positives = 33/69 (47%)
Query: 312 IVQKRPDILKHEMKVFFVKYNDPIYVKLEKL-DIMIRLASQANIAQVLSELKEYATEVDV 370
+ + + I KH +KY D I + L KL D + +++A+I V+ E V
Sbjct: 488 VKENQSTISKHSSSNNSIKY-DNIILHLSKLLDTLQVPSARASIVWVIGEYCYRVPLVAP 546
Query: 371 DFVRKAVRA 379
D RK V++
Sbjct: 547 DVFRKLVKS 555
Score = 47 (21.6 bits), Expect = 5.4e-16, Sum P(3) = 5.4e-16
Identities = 22/85 (25%), Positives = 39/85 (45%)
Query: 584 EPLRKCLKDEDPYVRKTAAVCVAK-LYDIN--AQLVED--QGFLDQLKDLLSDSNPMVVA 638
E + K LK+ YV+ VA + I A V D + + L LLS+ + +VVA
Sbjct: 397 ENIGKILKEFKEYVKNEDKKFVAATIQAIGSCASTVPDVTESCIYGLMSLLSNQSTVVVA 456
Query: 639 NAVAALSEMNEASTSGVALIEMNAQ 663
+V L + + + + L ++ +
Sbjct: 457 ESVIVLKRLLQLNATNEKLEKLEKE 481
Score = 46 (21.3 bits), Expect = 7.0e-29, Sum P(3) = 7.0e-29
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 405 KYAERIDN-ADELLESFLEGFHDENTQVQLQLLTAIVKLFLK 445
+Y R+ A ++ ++ F DE+ V+L+ L KL+++
Sbjct: 536 EYCYRVPLVAPDVFRKLVKSFSDEHESVKLETLNLGSKLYVQ 577
Score = 46 (21.3 bits), Expect = 7.0e-29, Sum P(3) = 7.0e-29
Identities = 20/74 (27%), Positives = 29/74 (39%)
Query: 560 PLIRALAVRTMG--CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLY----DINA 613
P RA V +G C RV + + L K DE V+ +KLY D N+
Sbjct: 524 PSARASIVWVIGEYCYRVPLVAPDVFRKLVKSFSDEHESVKLETLNLGSKLYVQFTDNNS 583
Query: 614 QLVEDQGFLDQLKD 627
D ++ K+
Sbjct: 584 TTTTDNSIPNEFKN 597
Score = 46 (21.3 bits), Expect = 6.8e-16, Sum P(3) = 6.8e-16
Identities = 55/276 (19%), Positives = 113/276 (40%)
Query: 354 IAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKYAERIDNA 413
I Q+L++ E++ + +D + K R+ RC ++ + ++ Y++ D
Sbjct: 208 ICQLLADFDEWSQVIVLDILTKYARSQFRCPDSTMN--DKNIKQFKKKSKSFYSDEEDQE 265
Query: 414 DELLESFL-------EGFHDENTQVQLQ---LLTAIVKLFLKRPTDTQELVQQVLSLATQ 463
D+ E+ L D + ++ + LL + + L R +V V SL
Sbjct: 266 DDEPENSLYKKKPLERDMFDSSEEIDMDHRLLLKSTLPLLQSR---NNAVVMAVSSLYFY 322
Query: 464 DSDNPDLRDRGFIYWRLLSTG-NTFYILL-HLTRLVIASMTVGKD-VSALFPDVVNCMQT 520
+ + + + G R+L +G YI L +++ +V ++ + +S F + +
Sbjct: 323 CAPSIEAQKVGKSLVRILRSGPEVQYITLTNISTMVTLRPSMFEPHLSEFFIHSSDPEYS 382
Query: 521 DNLELKKLVYLYLM-NYAKSHPDMAIMAVNTFVKDCEDSNPLIRALAVRTMG-CIR-VDK 577
L+L+ L L N K + +VK+ ED + A ++ +G C V
Sbjct: 383 IKLKLEILTRLATPENIGK-----ILKEFKEYVKN-EDKKFV--AATIQAIGSCASTVPD 434
Query: 578 ITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINA 613
+TE L L ++ V + + + +L +NA
Sbjct: 435 VTESCIYGLMSLLSNQSTVVVAESVIVLKRLLQLNA 470
Score = 39 (18.8 bits), Expect = 3.7e-28, Sum P(3) = 3.7e-28
Identities = 8/11 (72%), Positives = 9/11 (81%)
Query: 426 DENTQVQLQLL 436
DEN VQ+QLL
Sbjct: 1066 DENIYVQIQLL 1076
>UNIPROTKB|F1NLK7 [details] [associations]
symbol:AP4B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0005802 "trans-Golgi
network" evidence=IEA] InterPro:IPR002553 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 Pfam:PF09066 PIRSF:PIRSF002291 SMART:SM01020
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0005802 GO:GO:0030131
PANTHER:PTHR11134 GeneTree:ENSGT00530000063138 OMA:EQFEKTW
EMBL:AADN02045017 IPI:IPI00822122 Ensembl:ENSGALT00000002443
ArrayExpress:F1NLK7 Uniprot:F1NLK7
Length = 740
Score = 418 (152.2 bits), Expect = 6.1e-41, Sum P(2) = 6.1e-41
Identities = 100/320 (31%), Positives = 167/320 (52%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VI MT G DVS LF ++V ++ KKLV LY+ +A P +A++AVNT +DC
Sbjct: 36 VIRLMTQGADVSGLFAEMVKAGAAADVVQKKLVQLYVCAHAPRMPRLALLAVNTLRRDCA 95
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D +P +R LA+R + +R+ + EY+ +PL L+D YVR+ A + AK++ +
Sbjct: 96 DPSPAVRGLALRGLCDLRMPGMQEYVQQPLLSGLRDRASYVRRIAVLGCAKVHRLQGDAE 155
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
D +++L LL D +P+VV N + AL E+ + GV + N + LL + +
Sbjct: 156 VDGALVNELYSLLRDQDPIVVVNCLRALEEILKKE-GGVVI---NKPIAHHLLNRMADLD 211
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPG-EG 735
+WGQ +L L Y P+ + E +I + L ++ +VV++A K+ + L P +
Sbjct: 212 QWGQSEVLAFLLRYRPRSEEELFNILSLLDGYLKSSSPSVVMAATKLFLVLAREYPHVQA 271
Query: 736 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYV 795
D L + P L S E+ + AL ++ I+ P K FF Y++P Y+
Sbjct: 272 D---VLVRVKGPLLAACTSESRELCFTALCHVRQILSSLPGHFSSHYKKFFCSYSEPHYI 328
Query: 796 KLEKLDIMIRLASQANIAQV 815
K +K++++ L + N+ QV
Sbjct: 329 KCQKMEVLCELVNDENVQQV 348
Score = 179 (68.1 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 41/125 (32%), Positives = 68/125 (54%)
Query: 290 PLVTLLSSEP-EVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRL 348
PL+ +SE E+ + AL ++ I+ P K FF Y++P Y+K +K++++ L
Sbjct: 280 PLLAACTSESRELCFTALCHVRQILSSLPGHFSSHYKKFFCSYSEPHYIKCQKMEVLCEL 339
Query: 349 ASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKYAE 408
+ N+ QVL ELK Y T++ V+ + A+ AIG A E+CV L +L+ + E
Sbjct: 340 VNDENVQQVLEELKGYCTDISVELAQGAISAIGSIA---RTYTEQCVGILTELLGLQQ-E 395
Query: 409 RIDNA 413
I +A
Sbjct: 396 HITSA 400
Score = 159 (61.0 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 43/140 (30%), Positives = 73/140 (52%)
Query: 354 IAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLD------LIQT--K 405
+ ++L +E+ T V R V +C V Q+ C + D LI
Sbjct: 386 LTELLGLQQEHITSAVVQAFRDLVWLCPQCTDAVCQALPGCEDIIQDSEGKQALIWLLGA 445
Query: 406 YAERIDNADELLESFLEGFHDEN-TQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+ E++ NA +LE F+E E V+++LLTA+V+LFL RP + Q+++ ++L ++
Sbjct: 446 HGEKVPNAPYVLEDFVENVKTEVFPAVKMELLTALVRLFLSRPAECQDMLGRLLYHCIEE 505
Query: 465 SDNPDLRDRGFIYWRLLSTG 484
+ +RDRG Y+RLL +G
Sbjct: 506 EKDMSVRDRGLFYYRLLQSG 525
Score = 135 (52.6 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 28/89 (31%), Positives = 50/89 (56%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+V +DC D +P +R LA+R + +R+ + EY+ +PL L+D YVR+ A + A
Sbjct: 86 AVNTLRRDCADPSPAVRGLALRGLCDLRMPGMQEYVQQPLLSGLRDRASYVRRIAVLGCA 145
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
K++ + D +++L LL D +P+
Sbjct: 146 KVHRLQGDAEVDGALVNELYSLLRDQDPI 174
Score = 101 (40.6 bits), Expect = 3.8e-20, Sum P(3) = 3.8e-20
Identities = 43/145 (29%), Positives = 67/145 (46%)
Query: 38 IASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQKSS 97
I MT G DVS LF ++V ++ KKLV LY+ +A P +A++A +T +
Sbjct: 37 IRLMTQGADVSGLFAEMVKAGAAADVVQKKLVQLYVCAHAPRMPRLALLAVNTLRRDCAD 96
Query: 98 SSFQCMIDIRSIPLFDLCS--SVGV--FVKD-----CEDSNPLIRALAVRTMGCIRVDKI 148
S +R + L LC G+ +V+ D +R +AV +GC +V ++
Sbjct: 97 PSPA----VRGLALRGLCDLRMPGMQEYVQQPLLSGLRDRASYVRRIAV--LGCAKVHRL 150
Query: 149 ---TEY---LCEPLRKCLKDEDPYV 167
E L L L+D+DP V
Sbjct: 151 QGDAEVDGALVNELYSLLRDQDPIV 175
Score = 93 (37.8 bits), Expect = 6.1e-41, Sum P(2) = 6.1e-41
Identities = 18/72 (25%), Positives = 37/72 (51%)
Query: 814 QVNYVVQEAIVVIKDIFRKYPNKYETIISTL--CENLDTLDEPEARASMIWIIGEYAERI 871
Q ++ + +D+ P + + L CE D + + E + ++IW++G + E++
Sbjct: 393 QQEHITSAVVQAFRDLVWLCPQCTDAVCQALPGCE--DIIQDSEGKQALIWLLGAHGEKV 450
Query: 872 DNADELLESFLE 883
NA +LE F+E
Sbjct: 451 PNAPYVLEDFVE 462
Score = 43 (20.2 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 38/189 (20%), Positives = 76/189 (40%)
Query: 610 DINAQLVED---QGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTS---GVA--LIEMN 661
++ +LV D Q L++LK +D + + A++A+ + T G+ L+ +
Sbjct: 334 EVLCELVNDENVQQVLEELKGYCTDISVELAQGAISAIGSIARTYTEQCVGILTELLGLQ 393
Query: 662 AQTINKLLTALNECTEWGQVFILDSLSNYSPK-DDREAQSICERITPRLAHANAAVVLSA 720
+ I + W D++ P +D S ++ L A+ V +A
Sbjct: 394 QEHITSAVVQAFRDLVWLCPQCTDAVCQALPGCEDIIQDSEGKQALIWLLGAHGEKVPNA 453
Query: 721 VKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEP-EVQYVALRNINLIVQKRPDILK 779
VL +E + E + +L LV L S P E Q + R + +++ D+
Sbjct: 454 PYVLEDFVENVKTE--VFPAVKMELLTALVRLFLSRPAECQDMLGRLLYHCIEEEKDMSV 511
Query: 780 HEMKVFFVK 788
+ +F+ +
Sbjct: 512 RDRGLFYYR 520
>GENEDB_PFALCIPARUM|MAL7P1.164 [details] [associations]
symbol:MAL7P1.164 "adapter-related protein,
putative" species:5833 "Plasmodium falciparum" [GO:0030130
"clathrin coat of trans-Golgi network vesicle" evidence=ISS]
[GO:0016192 "vesicle-mediated transport" evidence=ISS]
InterPro:IPR002553 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0030131 PANTHER:PTHR11134 GO:GO:0030130 EMBL:AL844506
RefSeq:XP_001349197.2 ProteinModelPortal:Q8IBF8
EnsemblProtists:MAL7P1.164:mRNA GeneID:2654988 KEGG:pfa:MAL7P1.164
EuPathDB:PlasmoDB:PF3D7_0730200 HOGENOM:HOG000283882
ProtClustDB:CLSZ2500660 Uniprot:Q8IBF8
Length = 858
Score = 464 (168.4 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 117/399 (29%), Positives = 211/399 (52%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIA MT+G DVS LFPD++ T+++ KK++YLYL NYA+++ +++++ +NT KD +
Sbjct: 34 VIAYMTLGVDVSKLFPDIIMISSTNDIIQKKMIYLYLNNYAETNSELSLLTINTLQKDSK 93
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D +P+IR LA+RT +R++ + EY+ PL L D++ YVR+ A + KL +N L
Sbjct: 94 DDDPIIRGLALRTFCNLRINNLFEYIEGPLFNGLNDKNSYVRRIAIISCVKLIKMNPDLS 153
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
+ LK+ L D +P + N+V AL+E+ G +++N + + +L L+
Sbjct: 154 IRNDIIKILKNKLLDKDPQCIINSVHALNEIL-IDEGG---LKVNKEIVFNMLNKLSHFN 209
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWG+ IL +S Y P+++ E I + + ++ V L+ +K + + +
Sbjct: 210 EWGKSVILYIVSTYIPENEDEMYDIMNILENHIRDFSSTVFLACLKCFLNFSI---NDTN 266
Query: 737 FVSTLTKKLAPPLVTLLS-SEPEVQYVALRNINLIVQKRPD----ILKHEMKVFFVKYND 791
+ +++ PL+TL+S S E+ Y+ L + NL++ + I ++ K FF +YND
Sbjct: 267 LQIQIFQRMKDPLLTLISTSSNEIAYIVLLHTNLLLHEANKLNYKIFDYDYKHFFFRYND 326
Query: 792 PIYVKLEKLDIMIRLASQANIAQV-----NYV-------VQEAIVVIKDIFRKYPNKYET 839
Y+K KLDI++ +AS+ N+ + Y+ Q+AI I I K P
Sbjct: 327 LTYIKDIKLDILVSVASKNNVVLIINELSEYISDANVEIAQKAIESIGSIALKIPKCISR 386
Query: 840 IISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELL 878
++ N T++ ++ I I+ + + +L+
Sbjct: 387 VVELSLSNFMTMNYSYICSATIKILVNILRKYEEYTKLI 425
Score = 213 (80.0 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 73/285 (25%), Positives = 137/285 (48%)
Query: 285 KKLAPPLVTLLS-SEPEVQYVALRNINLIVQKRPD----ILKHEMKVFFVKYNDPIYVKL 339
+++ PL+TL+S S E+ Y+ L + NL++ + I ++ K FF +YND Y+K
Sbjct: 273 QRMKDPLLTLISTSSNEIAYIVLLHTNLLLHEANKLNYKIFDYDYKHFFFRYNDLTYIKD 332
Query: 340 EKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLL 399
KLDI++ +AS+ N+ +++EL EY ++ +V+ +KA+ +IG A+K+ + R V L
Sbjct: 333 IKLDILVSVASKNNVVLIINELSEYISDANVEIAQKAIESIGSIALKIPKCISRVVELSL 392
Query: 400 DLIQTKYAERIDNAD-ELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVL 458
T I +A ++L + L + +E T++ ++ I+K R D ++ +
Sbjct: 393 SNFMTMNYSYICSATIKILVNILRKY-EEYTKL---IIEEIIK-HGNRLIDNGGIISYIW 447
Query: 459 SLATQDS---DNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKD-VSALFPDV 514
+ + P L + +I R S +L +++ K+ VS LF ++
Sbjct: 448 IIGEYCEYIEEAPYLLEE-YINLRNCSYLFMLELLTACVKVLYRRPAEMKNIVSTLFDNI 506
Query: 515 VNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSN 559
+ + L K Y L++Y I VK+ +SN
Sbjct: 507 LKNYKYPELTDKMFFYYKLLSYNYKEAFHIIACKKKIVKNFSESN 551
Score = 156 (60.0 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 48/173 (27%), Positives = 89/173 (51%)
Query: 38 IASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQKSS 97
IA MT+G DVS LFPD++ T+++ KK++YLYL NYA+++ +++++ +T QK S
Sbjct: 35 IAYMTLGVDVSKLFPDIIMISSTNDIIQKKMIYLYLNNYAETNSELSLLTINTL--QKDS 92
Query: 98 SSFQCMIDIRSIPLFDLCSS---------VGVFVKDCEDSNPLIRALAVRTMGCIRVDKI 148
+I R + L C+ G D N +R +A+ + C+++ K+
Sbjct: 93 KDDDPII--RGLALRTFCNLRINNLFEYIEGPLFNGLNDKNSYVRRIAI--ISCVKLIKM 148
Query: 149 TEYLC--EPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLL 199
L + K LK++ + K + ++ +N L+ D+G L K+++
Sbjct: 149 NPDLSIRNDIIKILKNK--LLDKDPQCIINSVHALNEILI-DEGGLKVNKEIV 198
Score = 149 (57.5 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 44/161 (27%), Positives = 76/161 (47%)
Query: 45 KDVSALFPDVVNCMQTDNLELKKLVYLYL-MNYAKSHPDMAIMAFSTFFYQKSSSSFQCM 103
KDV P N + + K + Y+ L ++ +K PD+ +++ + QK
Sbjct: 12 KDVLKKLPQEKNDDKKREVLKKVIAYMTLGVDVSKLFPDIIMISSTNDIIQKKMIYLYLN 71
Query: 104 IDIRSIPLFDLCSSVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDE 163
+ L + + KD +D +P+IR LA+RT +R++ + EY+ PL L D+
Sbjct: 72 NYAETNSELSLLT-INTLQKDSKDDDPIIRGLALRTFCNLRINNLFEYIEGPLFNGLNDK 130
Query: 164 DPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNP 204
+ YVR+ A + KL +N L + LK+ L D +P
Sbjct: 131 NSYVRRIAIISCVKLIKMNPDLSIRNDIIKILKNKLLDKDP 171
Score = 110 (43.8 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 34/129 (26%), Positives = 61/129 (47%)
Query: 759 VQYVALRNINLIVQKRPDILKH---EMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQV 815
V + N+ LI+ + + + E+ ++ I +K+ K + S +N +
Sbjct: 339 VSVASKNNVVLIINELSEYISDANVEIAQKAIESIGSIALKIPKCISRVVELSLSNFMTM 398
Query: 816 NY--VVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDN 873
NY + I ++ +I RKY + II + ++ + L + S IWIIGEY E I+
Sbjct: 399 NYSYICSATIKILVNILRKYEEYTKLIIEEIIKHGNRLIDNGGIISYIWIIGEYCEYIEE 458
Query: 874 ADELLESFL 882
A LLE ++
Sbjct: 459 APYLLEEYI 467
Score = 47 (21.6 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 15/60 (25%), Positives = 29/60 (48%)
Query: 806 LASQANIAQVNYVVQEAIVV--IKDIFRKYPNKYETIISTLCEN-LDTLDEPEARASMIW 862
L N+ +Y+ ++ +K ++R+ P + + I+STL +N L PE M +
Sbjct: 463 LEEYINLRNCSYLFMLELLTACVKVLYRR-PAEMKNIVSTLFDNILKNYKYPELTDKMFF 521
>UNIPROTKB|Q8IBF8 [details] [associations]
symbol:MAL7P1.164 "Adapter-related protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0030130 "clathrin
coat of trans-Golgi network vesicle" evidence=ISS]
InterPro:IPR002553 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0030131 PANTHER:PTHR11134 GO:GO:0030130 EMBL:AL844506
RefSeq:XP_001349197.2 ProteinModelPortal:Q8IBF8
EnsemblProtists:MAL7P1.164:mRNA GeneID:2654988 KEGG:pfa:MAL7P1.164
EuPathDB:PlasmoDB:PF3D7_0730200 HOGENOM:HOG000283882
ProtClustDB:CLSZ2500660 Uniprot:Q8IBF8
Length = 858
Score = 464 (168.4 bits), Expect = 7.5e-41, P = 7.5e-41
Identities = 117/399 (29%), Positives = 211/399 (52%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIA MT+G DVS LFPD++ T+++ KK++YLYL NYA+++ +++++ +NT KD +
Sbjct: 34 VIAYMTLGVDVSKLFPDIIMISSTNDIIQKKMIYLYLNNYAETNSELSLLTINTLQKDSK 93
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D +P+IR LA+RT +R++ + EY+ PL L D++ YVR+ A + KL +N L
Sbjct: 94 DDDPIIRGLALRTFCNLRINNLFEYIEGPLFNGLNDKNSYVRRIAIISCVKLIKMNPDLS 153
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
+ LK+ L D +P + N+V AL+E+ G +++N + + +L L+
Sbjct: 154 IRNDIIKILKNKLLDKDPQCIINSVHALNEIL-IDEGG---LKVNKEIVFNMLNKLSHFN 209
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWG+ IL +S Y P+++ E I + + ++ V L+ +K + + +
Sbjct: 210 EWGKSVILYIVSTYIPENEDEMYDIMNILENHIRDFSSTVFLACLKCFLNFSI---NDTN 266
Query: 737 FVSTLTKKLAPPLVTLLS-SEPEVQYVALRNINLIVQKRPD----ILKHEMKVFFVKYND 791
+ +++ PL+TL+S S E+ Y+ L + NL++ + I ++ K FF +YND
Sbjct: 267 LQIQIFQRMKDPLLTLISTSSNEIAYIVLLHTNLLLHEANKLNYKIFDYDYKHFFFRYND 326
Query: 792 PIYVKLEKLDIMIRLASQANIAQV-----NYV-------VQEAIVVIKDIFRKYPNKYET 839
Y+K KLDI++ +AS+ N+ + Y+ Q+AI I I K P
Sbjct: 327 LTYIKDIKLDILVSVASKNNVVLIINELSEYISDANVEIAQKAIESIGSIALKIPKCISR 386
Query: 840 IISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELL 878
++ N T++ ++ I I+ + + +L+
Sbjct: 387 VVELSLSNFMTMNYSYICSATIKILVNILRKYEEYTKLI 425
Score = 213 (80.0 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 73/285 (25%), Positives = 137/285 (48%)
Query: 285 KKLAPPLVTLLS-SEPEVQYVALRNINLIVQKRPD----ILKHEMKVFFVKYNDPIYVKL 339
+++ PL+TL+S S E+ Y+ L + NL++ + I ++ K FF +YND Y+K
Sbjct: 273 QRMKDPLLTLISTSSNEIAYIVLLHTNLLLHEANKLNYKIFDYDYKHFFFRYNDLTYIKD 332
Query: 340 EKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLL 399
KLDI++ +AS+ N+ +++EL EY ++ +V+ +KA+ +IG A+K+ + R V L
Sbjct: 333 IKLDILVSVASKNNVVLIINELSEYISDANVEIAQKAIESIGSIALKIPKCISRVVELSL 392
Query: 400 DLIQTKYAERIDNAD-ELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVL 458
T I +A ++L + L + +E T++ ++ I+K R D ++ +
Sbjct: 393 SNFMTMNYSYICSATIKILVNILRKY-EEYTKL---IIEEIIK-HGNRLIDNGGIISYIW 447
Query: 459 SLATQDS---DNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKD-VSALFPDV 514
+ + P L + +I R S +L +++ K+ VS LF ++
Sbjct: 448 IIGEYCEYIEEAPYLLEE-YINLRNCSYLFMLELLTACVKVLYRRPAEMKNIVSTLFDNI 506
Query: 515 VNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSN 559
+ + L K Y L++Y I VK+ +SN
Sbjct: 507 LKNYKYPELTDKMFFYYKLLSYNYKEAFHIIACKKKIVKNFSESN 551
Score = 156 (60.0 bits), Expect = 1.9e-24, Sum P(2) = 1.9e-24
Identities = 48/173 (27%), Positives = 89/173 (51%)
Query: 38 IASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQKSS 97
IA MT+G DVS LFPD++ T+++ KK++YLYL NYA+++ +++++ +T QK S
Sbjct: 35 IAYMTLGVDVSKLFPDIIMISSTNDIIQKKMIYLYLNNYAETNSELSLLTINTL--QKDS 92
Query: 98 SSFQCMIDIRSIPLFDLCSS---------VGVFVKDCEDSNPLIRALAVRTMGCIRVDKI 148
+I R + L C+ G D N +R +A+ + C+++ K+
Sbjct: 93 KDDDPII--RGLALRTFCNLRINNLFEYIEGPLFNGLNDKNSYVRRIAI--ISCVKLIKM 148
Query: 149 TEYLC--EPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLL 199
L + K LK++ + K + ++ +N L+ D+G L K+++
Sbjct: 149 NPDLSIRNDIIKILKNK--LLDKDPQCIINSVHALNEILI-DEGGLKVNKEIV 198
Score = 149 (57.5 bits), Expect = 1.0e-23, Sum P(2) = 1.0e-23
Identities = 44/161 (27%), Positives = 76/161 (47%)
Query: 45 KDVSALFPDVVNCMQTDNLELKKLVYLYL-MNYAKSHPDMAIMAFSTFFYQKSSSSFQCM 103
KDV P N + + K + Y+ L ++ +K PD+ +++ + QK
Sbjct: 12 KDVLKKLPQEKNDDKKREVLKKVIAYMTLGVDVSKLFPDIIMISSTNDIIQKKMIYLYLN 71
Query: 104 IDIRSIPLFDLCSSVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDE 163
+ L + + KD +D +P+IR LA+RT +R++ + EY+ PL L D+
Sbjct: 72 NYAETNSELSLLT-INTLQKDSKDDDPIIRGLALRTFCNLRINNLFEYIEGPLFNGLNDK 130
Query: 164 DPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNP 204
+ YVR+ A + KL +N L + LK+ L D +P
Sbjct: 131 NSYVRRIAIISCVKLIKMNPDLSIRNDIIKILKNKLLDKDP 171
Score = 110 (43.8 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 34/129 (26%), Positives = 61/129 (47%)
Query: 759 VQYVALRNINLIVQKRPDILKH---EMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQV 815
V + N+ LI+ + + + E+ ++ I +K+ K + S +N +
Sbjct: 339 VSVASKNNVVLIINELSEYISDANVEIAQKAIESIGSIALKIPKCISRVVELSLSNFMTM 398
Query: 816 NY--VVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDN 873
NY + I ++ +I RKY + II + ++ + L + S IWIIGEY E I+
Sbjct: 399 NYSYICSATIKILVNILRKYEEYTKLIIEEIIKHGNRLIDNGGIISYIWIIGEYCEYIEE 458
Query: 874 ADELLESFL 882
A LLE ++
Sbjct: 459 APYLLEEYI 467
Score = 47 (21.6 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 15/60 (25%), Positives = 29/60 (48%)
Query: 806 LASQANIAQVNYVVQEAIVV--IKDIFRKYPNKYETIISTLCEN-LDTLDEPEARASMIW 862
L N+ +Y+ ++ +K ++R+ P + + I+STL +N L PE M +
Sbjct: 463 LEEYINLRNCSYLFMLELLTACVKVLYRR-PAEMKNIVSTLFDNILKNYKYPELTDKMFF 521
>RGD|1308950 [details] [associations]
symbol:Ap3b2 "adaptor-related protein complex 3, beta 2 subunit"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=IEA;ISO] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0008089 "anterograde axon
cargo transport" evidence=IEA;ISO] [GO:0030123 "AP-3 adaptor
complex" evidence=IEA] [GO:0048490 "anterograde synaptic vesicle
transport" evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
InterPro:IPR026740 Pfam:PF01602 PIRSF:PIRSF037096 RGD:1308950
GO:GO:0005634 GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 GeneTree:ENSGT00530000063546 KO:K12397
GO:GO:0030123 PANTHER:PTHR11134:SF1 CTD:8120 OrthoDB:EOG4VQ9NJ
OMA:ANLGRVP IPI:IPI00767753 RefSeq:XP_003748939.1
RefSeq:XP_003753350.1 PRIDE:D4AE00 Ensembl:ENSRNOT00000026030
GeneID:308777 KEGG:rno:308777 Uniprot:D4AE00
Length = 1082
Score = 318 (117.0 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 75/212 (35%), Positives = 121/212 (57%)
Query: 480 LLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKS 539
+L T N + L + ++A + GK+ S LFP VV + N+E+KKLVY+YL+ YA+
Sbjct: 45 MLDT-NKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEE 103
Query: 540 HPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRK 599
D+A+++++TF + +D N LIRA A+R + IRV I + +++ D PYVRK
Sbjct: 104 QQDLALLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRK 163
Query: 600 TAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIE 659
TAA + KLY +++ +DQ ++ ++ LL+D +V + V A E+ + LI
Sbjct: 164 TAAHAIPKLYSLDSDQ-KDQ-LIEVIEKLLADKTTLVAGSVVMAFEEV---CPERIDLIH 218
Query: 660 MNAQTINKLLTALNECTEWGQVFILDSLSNYS 691
N + KL L + EWGQV I+ L+ Y+
Sbjct: 219 KNYR---KLCNLLIDVEEWGQVVIISMLTRYA 247
Score = 220 (82.5 bits), Expect = 2.0e-30, Sum P(3) = 2.0e-30
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 287 LAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMI 346
+A LV LL S EVQYV L+N+ + KR + + +K F+++ DP +K+ KL+++
Sbjct: 340 IAKALVRLLRSHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLT 399
Query: 347 RLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK 405
LA++ NI VL E + Y +D DFV ++AIGRCA + + + C++ L+ L+ +
Sbjct: 400 NLANETNIPTVLREFQTYIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNR 458
Score = 138 (53.6 bits), Expect = 2.0e-30, Sum P(3) = 2.0e-30
Identities = 46/164 (28%), Positives = 84/164 (51%)
Query: 17 ELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNY 76
+LK L+++ +A + GK+ S LFP VV + N+E+KKLVY+YL+ Y
Sbjct: 41 DLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRY 100
Query: 77 AKSHPDMAIMAFSTFFYQKS---------SSSFQCMIDIRSIPLFDLCSSVGVFVKDC-E 126
A+ D+A+++ STF Q+ +S+ + + IR +P+ + + + +K+
Sbjct: 101 AEEQQDLALLSISTF--QRGLKDPNQLIRASALRVLSSIR-VPI--IVPIMMLAIKEAAS 155
Query: 127 DSNPLIR---ALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYV 167
D +P +R A A+ + + D+ + L E + K L D+ V
Sbjct: 156 DMSPYVRKTAAHAIPKLYSLDSDQ-KDQLIEVIEKLLADKTTLV 198
Score = 136 (52.9 bits), Expect = 3.2e-30, Sum P(3) = 3.2e-30
Identities = 31/89 (34%), Positives = 51/89 (57%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ F + +D N LIRA A+R + IRV I + +++ D PYVRKTAA +
Sbjct: 111 SISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIP 170
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KLY +++ +DQ ++ ++ LL+D +
Sbjct: 171 KLYSLDSDQ-KDQ-LIEVIEKLLADKTTL 197
Score = 132 (51.5 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 36/121 (29%), Positives = 61/121 (50%)
Query: 695 DREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLS 754
D + + + P L +AAVV++ ++ L V + K L V LL
Sbjct: 299 DPDHRLLLRNTKPLLQSRSAAVVMAVAQLYFHLAPKAE-----VGVIAKAL----VRLLR 349
Query: 755 SEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQ 814
S EVQYV L+N+ + KR + + +K F+++ DP +K+ KL+++ LA++ NI
Sbjct: 350 SHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPT 409
Query: 815 V 815
V
Sbjct: 410 V 410
Score = 119 (46.9 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 818 VVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERI 871
VV E++VVIK + + P ++ II L + D + P ARAS++W+IGEY E +
Sbjct: 462 VVAESVVVIKKLLQMQPAQHGEIIKHLAKLTDNIQVPMARASILWLIGEYCEHV 515
Score = 102 (41.0 bits), Expect = 1.0e-28, Sum P(4) = 1.0e-28
Identities = 34/106 (32%), Positives = 53/106 (50%)
Query: 396 STLLDLIQTKYAERIDN-ADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELV 454
+++L LI +Y E + A ++L + F E V+LQ++ KL+L T+ L
Sbjct: 502 ASILWLIG-EYCEHVPKIAPDVLRKMAKSFTAEEDIVKLQVINLAAKLYLTNSKQTKLLT 560
Query: 455 QQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYILL-HLTRLVIA 499
Q VLSLA D N D+RDR +L++ L H +L +A
Sbjct: 561 QYVLSLAKYDQ-NYDIRDRARFTRQLIAPSEQGGALSRHAKKLFLA 605
Score = 62 (26.9 bits), Expect = 1.6e-24, Sum P(3) = 1.6e-24
Identities = 26/120 (21%), Positives = 55/120 (45%)
Query: 709 LAHANAAVVLSAVKVLMKLMEMLPGE-GDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNI 767
L++ + VV +V V+ KL++M P + G+ + L K V + + + ++
Sbjct: 455 LSNRDELVVAESVVVIKKLLQMQPAQHGEIIKHLAKLTDNIQVPM--ARASILWLIGEYC 512
Query: 768 NLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIK 827
+ + PD+L+ K F + + VKL+ +++ +L N Q + Q + + K
Sbjct: 513 EHVPKIAPDVLRKMAKSFTAEED---IVKLQVINLAAKLYL-TNSKQTKLLTQYVLSLAK 568
Score = 48 (22.0 bits), Expect = 3.2e-23, Sum P(4) = 3.2e-23
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 560 PLIRALAVRTMG--CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 614
P+ RA + +G C V KI + + K E+ V+ AKLY N++
Sbjct: 498 PMARASILWLIGEYCEHVPKIAPDVLRKMAKSFTAEEDIVKLQVINLAAKLYLTNSK 554
Score = 47 (21.6 bits), Expect = 7.8e-05, Sum P(3) = 7.8e-05
Identities = 19/81 (23%), Positives = 45/81 (55%)
Query: 301 VQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKL--DIMIRLASQANIAQVL 358
VQ ++ R+ L+V + ++K +++ ++ + I L KL +I + +A +A+I ++
Sbjct: 452 VQLLSNRD-ELVVAESVVVIKKLLQMQPAQHGE-IIKHLAKLTDNIQVPMA-RASILWLI 508
Query: 359 SELKEYATEVDVDFVRKAVRA 379
E E+ ++ D +RK ++
Sbjct: 509 GEYCEHVPKIAPDVLRKMAKS 529
Score = 45 (20.9 bits), Expect = 1.0e-28, Sum P(4) = 1.0e-28
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 736 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLI 770
DF S + ++PP+V S +++ + L + +L+
Sbjct: 813 DFTSPSVQPVSPPMVVSTSLAADLEGLTLTDSSLV 847
Score = 45 (20.9 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 278 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLI 312
DF S + ++PP+V S +++ + L + +L+
Sbjct: 813 DFTSPSVQPVSPPMVVSTSLAADLEGLTLTDSSLV 847
Score = 41 (19.5 bits), Expect = 1.7e-22, Sum P(4) = 1.7e-22
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 622 LDQLKDLLSDSNPMVVANAVAALSEM 647
L+ L LLS+ + +VVA +V + ++
Sbjct: 448 LNGLVQLLSNRDELVVAESVVVIKKL 473
>MGI|MGI:1100869 [details] [associations]
symbol:Ap3b2 "adaptor-related protein complex 3, beta 2
subunit" species:10090 "Mus musculus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=TAS]
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=TAS] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IMP] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=TAS] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0030123 "AP-3 adaptor complex" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0048490 "anterograde
synaptic vesicle transport" evidence=IMP] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 MGI:MGI:1100869 GO:GO:0005634
GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006897 GO:GO:0008089 GO:GO:0005802
eggNOG:COG5096 GO:GO:0030665 PANTHER:PTHR11134
GeneTree:ENSGT00530000063546 HOGENOM:HOG000033978
HOVERGEN:HBG050519 KO:K12397 GO:GO:0030123 GO:GO:0048490
PANTHER:PTHR11134:SF1 CTD:8120 OrthoDB:EOG4VQ9NJ EMBL:AY528675
EMBL:BC139378 EMBL:BC139379 EMBL:AK134504 EMBL:AB030202
IPI:IPI00420426 RefSeq:NP_067467.2 UniGene:Mm.322894
ProteinModelPortal:Q9JME5 SMR:Q9JME5 IntAct:Q9JME5 STRING:Q9JME5
PhosphoSite:Q9JME5 PaxDb:Q9JME5 PRIDE:Q9JME5
Ensembl:ENSMUST00000082090 GeneID:11775 KEGG:mmu:11775
UCSC:uc009iby.1 InParanoid:Q3UYP8 OMA:ANLGRVP NextBio:279567
Bgee:Q9JME5 CleanEx:MM_AP3B2 Genevestigator:Q9JME5
GermOnline:ENSMUSG00000062444 Uniprot:Q9JME5
Length = 1082
Score = 318 (117.0 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 75/212 (35%), Positives = 121/212 (57%)
Query: 480 LLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKS 539
+L T N + L + ++A + GK+ S LFP VV + N+E+KKLVY+YL+ YA+
Sbjct: 45 MLDT-NKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEE 103
Query: 540 HPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRK 599
D+A+++++TF + +D N LIRA A+R + IRV I + +++ D PYVRK
Sbjct: 104 QQDLALLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRK 163
Query: 600 TAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIE 659
TAA + KLY +++ +DQ ++ ++ LL+D +V + V A E+ + LI
Sbjct: 164 TAAHAIPKLYSLDSDQ-KDQ-LIEVIEKLLADKTTLVAGSVVMAFEEV---CPERIDLIH 218
Query: 660 MNAQTINKLLTALNECTEWGQVFILDSLSNYS 691
N + KL L + EWGQV I+ L+ Y+
Sbjct: 219 KNYR---KLCNLLIDVEEWGQVVIISMLTRYA 247
Score = 220 (82.5 bits), Expect = 2.0e-30, Sum P(3) = 2.0e-30
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 287 LAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMI 346
+A LV LL S EVQYV L+N+ + KR + + +K F+++ DP +K+ KL+++
Sbjct: 340 IAKALVRLLRSHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLT 399
Query: 347 RLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK 405
LA++ NI VL E + Y +D DFV ++AIGRCA + + + C++ L+ L+ +
Sbjct: 400 NLANETNIPTVLREFQTYIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNR 458
Score = 138 (53.6 bits), Expect = 2.0e-30, Sum P(3) = 2.0e-30
Identities = 46/164 (28%), Positives = 84/164 (51%)
Query: 17 ELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNY 76
+LK L+++ +A + GK+ S LFP VV + N+E+KKLVY+YL+ Y
Sbjct: 41 DLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRY 100
Query: 77 AKSHPDMAIMAFSTFFYQKS---------SSSFQCMIDIRSIPLFDLCSSVGVFVKDC-E 126
A+ D+A+++ STF Q+ +S+ + + IR +P+ + + + +K+
Sbjct: 101 AEEQQDLALLSISTF--QRGLKDPNQLIRASALRVLSSIR-VPI--IVPIMMLAIKEAAS 155
Query: 127 DSNPLIR---ALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYV 167
D +P +R A A+ + + D+ + L E + K L D+ V
Sbjct: 156 DMSPYVRKTAAHAIPKLYSLDSDQ-KDQLIEVIEKLLADKTTLV 198
Score = 136 (52.9 bits), Expect = 3.2e-30, Sum P(3) = 3.2e-30
Identities = 31/89 (34%), Positives = 51/89 (57%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ F + +D N LIRA A+R + IRV I + +++ D PYVRKTAA +
Sbjct: 111 SISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIP 170
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KLY +++ +DQ ++ ++ LL+D +
Sbjct: 171 KLYSLDSDQ-KDQ-LIEVIEKLLADKTTL 197
Score = 132 (51.5 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 36/121 (29%), Positives = 61/121 (50%)
Query: 695 DREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLS 754
D + + + P L +AAVV++ ++ L V + K L V LL
Sbjct: 299 DPDHRLLLRNTKPLLQSRSAAVVMAVAQLYFHLAPKAE-----VGVIAKAL----VRLLR 349
Query: 755 SEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQ 814
S EVQYV L+N+ + KR + + +K F+++ DP +K+ KL+++ LA++ NI
Sbjct: 350 SHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPT 409
Query: 815 V 815
V
Sbjct: 410 V 410
Score = 119 (46.9 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 818 VVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERI 871
VV E++VVIK + + P ++ II L + D + P ARAS++W+IGEY E +
Sbjct: 462 VVAESVVVIKKLLQMQPAQHGEIIKHLAKLTDNIQVPMARASILWLIGEYCEHV 515
Score = 101 (40.6 bits), Expect = 4.1e-28, Sum P(4) = 4.1e-28
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 396 STLLDLIQTKYAERIDN-ADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELV 454
+++L LI +Y E + A ++L + F E V+LQ++ KL+L T+ L
Sbjct: 502 ASILWLIG-EYCEHVPKIAPDVLRKMAKSFTAEEDIVKLQVINLAAKLYLTNSKQTKLLT 560
Query: 455 QQVLSLATQDSDNPDLRDR 473
Q VLSLA D N D+RDR
Sbjct: 561 QYVLSLAKYDQ-NYDIRDR 578
Score = 62 (26.9 bits), Expect = 1.6e-24, Sum P(3) = 1.6e-24
Identities = 26/120 (21%), Positives = 55/120 (45%)
Query: 709 LAHANAAVVLSAVKVLMKLMEMLPGE-GDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNI 767
L++ + VV +V V+ KL++M P + G+ + L K V + + + ++
Sbjct: 455 LSNRDELVVAESVVVIKKLLQMQPAQHGEIIKHLAKLTDNIQVPM--ARASILWLIGEYC 512
Query: 768 NLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIK 827
+ + PD+L+ K F + + VKL+ +++ +L N Q + Q + + K
Sbjct: 513 EHVPKIAPDVLRKMAKSFTAEED---IVKLQVINLAAKLYL-TNSKQTKLLTQYVLSLAK 568
Score = 48 (22.0 bits), Expect = 1.0e-22, Sum P(4) = 1.0e-22
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 560 PLIRALAVRTMG--CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 614
P+ RA + +G C V KI + + K E+ V+ AKLY N++
Sbjct: 498 PMARASILWLIGEYCEHVPKIAPDVLRKMAKSFTAEEDIVKLQVINLAAKLYLTNSK 554
Score = 47 (21.6 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 19/81 (23%), Positives = 45/81 (55%)
Query: 301 VQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKL--DIMIRLASQANIAQVL 358
VQ ++ R+ L+V + ++K +++ ++ + I L KL +I + +A +A+I ++
Sbjct: 452 VQLLSNRD-ELVVAESVVVIKKLLQMQPAQHGE-IIKHLAKLTDNIQVPMA-RASILWLI 508
Query: 359 SELKEYATEVDVDFVRKAVRA 379
E E+ ++ D +RK ++
Sbjct: 509 GEYCEHVPKIAPDVLRKMAKS 529
Score = 41 (19.5 bits), Expect = 5.4e-22, Sum P(4) = 5.4e-22
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 622 LDQLKDLLSDSNPMVVANAVAALSEM 647
L+ L LLS+ + +VVA +V + ++
Sbjct: 448 LNGLVQLLSNRDELVVAESVVVIKKL 473
Score = 40 (19.1 bits), Expect = 4.1e-28, Sum P(4) = 4.1e-28
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 736 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLI 770
DF + ++PP+V S +++ + L + +L+
Sbjct: 813 DFTPPSVQPVSPPMVVSTSLAADLEGLTLTDSSLV 847
Score = 40 (19.1 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 8/35 (22%), Positives = 19/35 (54%)
Query: 278 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLI 312
DF + ++PP+V S +++ + L + +L+
Sbjct: 813 DFTPPSVQPVSPPMVVSTSLAADLEGLTLTDSSLV 847
>UNIPROTKB|Q13367 [details] [associations]
symbol:AP3B2 "AP-3 complex subunit beta-2" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0030665
"clathrin-coated vesicle membrane" evidence=IEA] [GO:0008089
"anterograde axon cargo transport" evidence=ISS] [GO:0048490
"anterograde synaptic vesicle transport" evidence=ISS] [GO:0005215
"transporter activity" evidence=TAS] [GO:0030137 "COPI-coated
vesicle" evidence=TAS] [GO:0006892 "post-Golgi vesicle-mediated
transport" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
InterPro:IPR026740 Pfam:PF01602 PIRSF:PIRSF037096
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0005634 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006897
GO:GO:0005215 GO:GO:0008089 eggNOG:COG5096 GO:GO:0030665
PANTHER:PTHR11134 SUPFAM:SSF49348 GO:GO:0006892 Gene3D:2.60.40.1230
HOVERGEN:HBG050519 KO:K12397 GO:GO:0030123 GO:GO:0048490
PANTHER:PTHR11134:SF1 EMBL:U37673 EMBL:AF022152 EMBL:DQ092369
EMBL:BC093739 IPI:IPI00005793 IPI:IPI01011317 PIR:T50650
RefSeq:NP_004635.2 UniGene:Hs.199593 ProteinModelPortal:Q13367
SMR:Q13367 IntAct:Q13367 STRING:Q13367 PhosphoSite:Q13367
DMDM:18202497 PaxDb:Q13367 PRIDE:Q13367 Ensembl:ENST00000261722
GeneID:8120 KEGG:hsa:8120 UCSC:uc010uog.2 CTD:8120
GeneCards:GC15M083328 HGNC:HGNC:567 HPA:HPA039467 HPA:HPA039818
MIM:602166 neXtProt:NX_Q13367 PharmGKB:PA24858 InParanoid:Q13367
OrthoDB:EOG4VQ9NJ GenomeRNAi:8120 NextBio:30780 ArrayExpress:Q13367
Bgee:Q13367 CleanEx:HS_AP3B2 Genevestigator:Q13367
GermOnline:ENSG00000103723 GO:GO:0030137 Uniprot:Q13367
Length = 1082
Score = 318 (117.0 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 75/212 (35%), Positives = 121/212 (57%)
Query: 480 LLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKS 539
+L T N + L + ++A + GK+ S LFP VV + N+E+KKLVY+YL+ YA+
Sbjct: 45 MLDT-NKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEE 103
Query: 540 HPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRK 599
D+A+++++TF + +D N LIRA A+R + IRV I + +++ D PYVRK
Sbjct: 104 QQDLALLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRK 163
Query: 600 TAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIE 659
TAA + KLY +++ +DQ ++ ++ LL+D +V + V A E+ + LI
Sbjct: 164 TAAHAIPKLYSLDSDQ-KDQ-LIEVIEKLLADKTTLVAGSVVMAFEEV---CPERIDLIH 218
Query: 660 MNAQTINKLLTALNECTEWGQVFILDSLSNYS 691
N + KL L + EWGQV I+ L+ Y+
Sbjct: 219 KNYR---KLCNLLIDVEEWGQVVIISMLTRYA 247
Score = 220 (82.5 bits), Expect = 2.0e-30, Sum P(3) = 2.0e-30
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 287 LAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMI 346
+A LV LL S EVQYV L+N+ + KR + + +K F+++ DP +K+ KL+++
Sbjct: 340 IAKALVRLLRSHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLT 399
Query: 347 RLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK 405
LA++ NI VL E + Y +D DFV ++AIGRCA + + + C++ L+ L+ +
Sbjct: 400 NLANETNIPTVLREFQTYIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNR 458
Score = 138 (53.6 bits), Expect = 2.0e-30, Sum P(3) = 2.0e-30
Identities = 46/164 (28%), Positives = 84/164 (51%)
Query: 17 ELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNY 76
+LK L+++ +A + GK+ S LFP VV + N+E+KKLVY+YL+ Y
Sbjct: 41 DLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRY 100
Query: 77 AKSHPDMAIMAFSTFFYQKS---------SSSFQCMIDIRSIPLFDLCSSVGVFVKDC-E 126
A+ D+A+++ STF Q+ +S+ + + IR +P+ + + + +K+
Sbjct: 101 AEEQQDLALLSISTF--QRGLKDPNQLIRASALRVLSSIR-VPI--IVPIMMLAIKEAAS 155
Query: 127 DSNPLIR---ALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYV 167
D +P +R A A+ + + D+ + L E + K L D+ V
Sbjct: 156 DMSPYVRKTAAHAIPKLYSLDSDQ-KDQLIEVIEKLLADKTTLV 198
Score = 136 (52.9 bits), Expect = 3.2e-30, Sum P(3) = 3.2e-30
Identities = 31/89 (34%), Positives = 51/89 (57%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ F + +D N LIRA A+R + IRV I + +++ D PYVRKTAA +
Sbjct: 111 SISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIP 170
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KLY +++ +DQ ++ ++ LL+D +
Sbjct: 171 KLYSLDSDQ-KDQ-LIEVIEKLLADKTTL 197
Score = 132 (51.5 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 36/121 (29%), Positives = 61/121 (50%)
Query: 695 DREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLS 754
D + + + P L +AAVV++ ++ L V + K L V LL
Sbjct: 299 DPDHRLLLRNTKPLLQSRSAAVVMAVAQLYFHLAPKAE-----VGVIAKAL----VRLLR 349
Query: 755 SEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQ 814
S EVQYV L+N+ + KR + + +K F+++ DP +K+ KL+++ LA++ NI
Sbjct: 350 SHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPT 409
Query: 815 V 815
V
Sbjct: 410 V 410
Score = 119 (46.9 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 818 VVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERI 871
VV E++VVIK + + P ++ II L + D + P ARAS++W+IGEY E +
Sbjct: 462 VVAESVVVIKKLLQMQPAQHGEIIKHLAKLTDNIQVPMARASILWLIGEYCEHV 515
Score = 101 (40.6 bits), Expect = 1.5e-28, Sum P(3) = 1.5e-28
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 396 STLLDLIQTKYAERIDN-ADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELV 454
+++L LI +Y E + A ++L + F E V+LQ++ KL+L T+ L
Sbjct: 502 ASILWLIG-EYCEHVPRIAPDVLRKMAKSFTAEEDIVKLQVINLAAKLYLTNSKQTKLLT 560
Query: 455 QQVLSLATQDSDNPDLRDR 473
Q VLSLA D N D+RDR
Sbjct: 561 QYVLSLAKYDQ-NYDIRDR 578
Score = 62 (26.9 bits), Expect = 1.6e-24, Sum P(3) = 1.6e-24
Identities = 26/120 (21%), Positives = 55/120 (45%)
Query: 709 LAHANAAVVLSAVKVLMKLMEMLPGE-GDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNI 767
L++ + VV +V V+ KL++M P + G+ + L K V + + + ++
Sbjct: 455 LSNRDELVVAESVVVIKKLLQMQPAQHGEIIKHLAKLTDNIQVPM--ARASILWLIGEYC 512
Query: 768 NLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIK 827
+ + PD+L+ K F + + VKL+ +++ +L N Q + Q + + K
Sbjct: 513 EHVPRIAPDVLRKMAKSFTAEED---IVKLQVINLAAKLYL-TNSKQTKLLTQYVLSLAK 568
Score = 46 (21.3 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 19/81 (23%), Positives = 44/81 (54%)
Query: 301 VQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKL--DIMIRLASQANIAQVL 358
VQ ++ R+ L+V + ++K +++ ++ + I L KL +I + +A +A+I ++
Sbjct: 452 VQLLSNRD-ELVVAESVVVIKKLLQMQPAQHGE-IIKHLAKLTDNIQVPMA-RASILWLI 508
Query: 359 SELKEYATEVDVDFVRKAVRA 379
E E+ + D +RK ++
Sbjct: 509 GEYCEHVPRIAPDVLRKMAKS 529
Score = 45 (20.9 bits), Expect = 8.9e-23, Sum P(3) = 8.9e-23
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 560 PLIRALAVRTMG--CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 614
P+ RA + +G C V +I + + K E+ V+ AKLY N++
Sbjct: 498 PMARASILWLIGEYCEHVPRIAPDVLRKMAKSFTAEEDIVKLQVINLAAKLYLTNSK 554
Score = 41 (19.5 bits), Expect = 2.3e-22, Sum P(3) = 2.3e-22
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 622 LDQLKDLLSDSNPMVVANAVAALSEM 647
L+ L LLS+ + +VVA +V + ++
Sbjct: 448 LNGLVQLLSNRDELVVAESVVVIKKL 473
>UNIPROTKB|F1RI97 [details] [associations]
symbol:F1RI97 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 SUPFAM:SSF49348 GeneTree:ENSGT00530000063546
GO:GO:0030123 PANTHER:PTHR11134:SF1 OMA:ANLGRVP EMBL:CU326406
Ensembl:ENSSSCT00000002023 Uniprot:F1RI97
Length = 1082
Score = 318 (117.0 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 75/212 (35%), Positives = 121/212 (57%)
Query: 480 LLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKS 539
+L T N + L + ++A + GK+ S LFP VV + N+E+KKLVY+YL+ YA+
Sbjct: 45 MLDT-NKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEE 103
Query: 540 HPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRK 599
D+A+++++TF + +D N LIRA A+R + IRV I + +++ D PYVRK
Sbjct: 104 QQDLALLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRK 163
Query: 600 TAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIE 659
TAA + KLY +++ +DQ ++ ++ LL+D +V + V A E+ + LI
Sbjct: 164 TAAHAIPKLYSLDSDQ-KDQ-LIEVIEKLLADKTTLVAGSVVMAFEEV---CPERIDLIH 218
Query: 660 MNAQTINKLLTALNECTEWGQVFILDSLSNYS 691
N + KL L + EWGQV I+ L+ Y+
Sbjct: 219 KNYR---KLCNLLIDVEEWGQVVIISMLTRYA 247
Score = 220 (82.5 bits), Expect = 2.0e-30, Sum P(3) = 2.0e-30
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 287 LAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMI 346
+A LV LL S EVQYV L+N+ + KR + + +K F+++ DP +K+ KL+++
Sbjct: 340 IAKALVRLLRSHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLT 399
Query: 347 RLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK 405
LA++ NI VL E + Y +D DFV ++AIGRCA + + + C++ L+ L+ +
Sbjct: 400 NLANETNIPTVLREFQTYIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNR 458
Score = 138 (53.6 bits), Expect = 2.0e-30, Sum P(3) = 2.0e-30
Identities = 46/164 (28%), Positives = 84/164 (51%)
Query: 17 ELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNY 76
+LK L+++ +A + GK+ S LFP VV + N+E+KKLVY+YL+ Y
Sbjct: 41 DLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRY 100
Query: 77 AKSHPDMAIMAFSTFFYQKS---------SSSFQCMIDIRSIPLFDLCSSVGVFVKDC-E 126
A+ D+A+++ STF Q+ +S+ + + IR +P+ + + + +K+
Sbjct: 101 AEEQQDLALLSISTF--QRGLKDPNQLIRASALRVLSSIR-VPI--IVPIMMLAIKEAAS 155
Query: 127 DSNPLIR---ALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYV 167
D +P +R A A+ + + D+ + L E + K L D+ V
Sbjct: 156 DMSPYVRKTAAHAIPKLYSLDSDQ-KDQLIEVIEKLLADKTTLV 198
Score = 136 (52.9 bits), Expect = 3.2e-30, Sum P(3) = 3.2e-30
Identities = 31/89 (34%), Positives = 51/89 (57%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ F + +D N LIRA A+R + IRV I + +++ D PYVRKTAA +
Sbjct: 111 SISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIP 170
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KLY +++ +DQ ++ ++ LL+D +
Sbjct: 171 KLYSLDSDQ-KDQ-LIEVIEKLLADKTTL 197
Score = 132 (51.5 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 36/121 (29%), Positives = 61/121 (50%)
Query: 695 DREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLS 754
D + + + P L +AAVV++ ++ L V + K L V LL
Sbjct: 299 DPDHRLLLRNTKPLLQSRSAAVVMAVAQLYFHLAPKAE-----VGVIAKAL----VRLLR 349
Query: 755 SEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQ 814
S EVQYV L+N+ + KR + + +K F+++ DP +K+ KL+++ LA++ NI
Sbjct: 350 SHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPT 409
Query: 815 V 815
V
Sbjct: 410 V 410
Score = 119 (46.9 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 818 VVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERI 871
VV E++VVIK + + P ++ II L + D + P ARAS++W+IGEY E +
Sbjct: 462 VVAESVVVIKKLLQMQPAQHGEIIKHLAKLTDNIQVPMARASILWLIGEYCEHV 515
Score = 101 (40.6 bits), Expect = 1.5e-28, Sum P(3) = 1.5e-28
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 396 STLLDLIQTKYAERIDN-ADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELV 454
+++L LI +Y E + A ++L + F E V+LQ++ KL+L T+ L
Sbjct: 502 ASILWLIG-EYCEHVPRIAPDVLRKMAKSFTAEEDIVKLQVINLAAKLYLTNSKQTKLLT 560
Query: 455 QQVLSLATQDSDNPDLRDR 473
Q VLSLA D N D+RDR
Sbjct: 561 QYVLSLAKYDQ-NYDIRDR 578
Score = 62 (26.9 bits), Expect = 1.6e-24, Sum P(3) = 1.6e-24
Identities = 26/120 (21%), Positives = 55/120 (45%)
Query: 709 LAHANAAVVLSAVKVLMKLMEMLPGE-GDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNI 767
L++ + VV +V V+ KL++M P + G+ + L K V + + + ++
Sbjct: 455 LSNRDELVVAESVVVIKKLLQMQPAQHGEIIKHLAKLTDNIQVPM--ARASILWLIGEYC 512
Query: 768 NLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIK 827
+ + PD+L+ K F + + VKL+ +++ +L N Q + Q + + K
Sbjct: 513 EHVPRIAPDVLRKMAKSFTAEED---IVKLQVINLAAKLYL-TNSKQTKLLTQYVLSLAK 568
Score = 46 (21.3 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 19/81 (23%), Positives = 44/81 (54%)
Query: 301 VQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKL--DIMIRLASQANIAQVL 358
VQ ++ R+ L+V + ++K +++ ++ + I L KL +I + +A +A+I ++
Sbjct: 452 VQLLSNRD-ELVVAESVVVIKKLLQMQPAQHGE-IIKHLAKLTDNIQVPMA-RASILWLI 508
Query: 359 SELKEYATEVDVDFVRKAVRA 379
E E+ + D +RK ++
Sbjct: 509 GEYCEHVPRIAPDVLRKMAKS 529
Score = 45 (20.9 bits), Expect = 8.9e-23, Sum P(3) = 8.9e-23
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 560 PLIRALAVRTMG--CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 614
P+ RA + +G C V +I + + K E+ V+ AKLY N++
Sbjct: 498 PMARASILWLIGEYCEHVPRIAPDVLRKMAKSFTAEEDIVKLQVINLAAKLYLTNSK 554
Score = 41 (19.5 bits), Expect = 2.3e-22, Sum P(3) = 2.3e-22
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 622 LDQLKDLLSDSNPMVVANAVAALSEM 647
L+ L LLS+ + +VVA +V + ++
Sbjct: 448 LNGLVQLLSNRDELVVAESVVVIKKL 473
>UNIPROTKB|F1P7W8 [details] [associations]
symbol:AP3B2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 SUPFAM:SSF49348 GeneTree:ENSGT00530000063546
GO:GO:0030123 PANTHER:PTHR11134:SF1 EMBL:AAEX03002348
EMBL:AAEX03002349 EMBL:AAEX03002347 Ensembl:ENSCAFT00000020838
Uniprot:F1P7W8
Length = 1084
Score = 318 (117.0 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 75/212 (35%), Positives = 121/212 (57%)
Query: 480 LLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKS 539
+L T N + L + ++A + GK+ S LFP VV + N+E+KKLVY+YL+ YA+
Sbjct: 27 MLDT-NKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEE 85
Query: 540 HPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRK 599
D+A+++++TF + +D N LIRA A+R + IRV I + +++ D PYVRK
Sbjct: 86 QQDLALLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRK 145
Query: 600 TAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIE 659
TAA + KLY +++ +DQ ++ ++ LL+D +V + V A E+ + LI
Sbjct: 146 TAAHAIPKLYSLDSDQ-KDQ-LIEVIEKLLADKTTLVAGSVVMAFEEV---CPERIDLIH 200
Query: 660 MNAQTINKLLTALNECTEWGQVFILDSLSNYS 691
N + KL L + EWGQV I+ L+ Y+
Sbjct: 201 KNYR---KLCNLLIDVEEWGQVVIISMLTRYA 229
Score = 220 (82.5 bits), Expect = 2.0e-30, Sum P(3) = 2.0e-30
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 287 LAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMI 346
+A LV LL S EVQYV L+N+ + KR + + +K F+++ DP +K+ KL+++
Sbjct: 322 IAKALVRLLRSHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLT 381
Query: 347 RLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK 405
LA++ NI VL E + Y +D DFV ++AIGRCA + + + C++ L+ L+ +
Sbjct: 382 NLANETNIPTVLREFQTYIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNR 440
Score = 138 (53.6 bits), Expect = 2.0e-30, Sum P(3) = 2.0e-30
Identities = 46/164 (28%), Positives = 84/164 (51%)
Query: 17 ELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNY 76
+LK L+++ +A + GK+ S LFP VV + N+E+KKLVY+YL+ Y
Sbjct: 23 DLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRY 82
Query: 77 AKSHPDMAIMAFSTFFYQKS---------SSSFQCMIDIRSIPLFDLCSSVGVFVKDC-E 126
A+ D+A+++ STF Q+ +S+ + + IR +P+ + + + +K+
Sbjct: 83 AEEQQDLALLSISTF--QRGLKDPNQLIRASALRVLSSIR-VPI--IVPIMMLAIKEAAS 137
Query: 127 DSNPLIR---ALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYV 167
D +P +R A A+ + + D+ + L E + K L D+ V
Sbjct: 138 DMSPYVRKTAAHAIPKLYSLDSDQ-KDQLIEVIEKLLADKTTLV 180
Score = 136 (52.9 bits), Expect = 3.2e-30, Sum P(3) = 3.2e-30
Identities = 31/89 (34%), Positives = 51/89 (57%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ F + +D N LIRA A+R + IRV I + +++ D PYVRKTAA +
Sbjct: 93 SISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIP 152
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KLY +++ +DQ ++ ++ LL+D +
Sbjct: 153 KLYSLDSDQ-KDQ-LIEVIEKLLADKTTL 179
Score = 132 (51.5 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 36/121 (29%), Positives = 61/121 (50%)
Query: 695 DREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLS 754
D + + + P L +AAVV++ ++ L V + K L V LL
Sbjct: 281 DPDHRLLLRNTKPLLQSRSAAVVMAVAQLYFHLAPKAE-----VGVIAKAL----VRLLR 331
Query: 755 SEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQ 814
S EVQYV L+N+ + KR + + +K F+++ DP +K+ KL+++ LA++ NI
Sbjct: 332 SHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPT 391
Query: 815 V 815
V
Sbjct: 392 V 392
Score = 119 (46.9 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 818 VVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERI 871
VV E++VVIK + + P ++ II L + D + P ARAS++W+IGEY E +
Sbjct: 444 VVAESVVVIKKLLQMQPAQHGEIIKHLAKLTDNIQVPMARASILWLIGEYCEHV 497
Score = 101 (40.6 bits), Expect = 1.5e-28, Sum P(3) = 1.5e-28
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 396 STLLDLIQTKYAERIDN-ADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELV 454
+++L LI +Y E + A ++L + F E V+LQ++ KL+L T+ L
Sbjct: 484 ASILWLIG-EYCEHVPKIAPDVLRKMAKSFTAEEDIVKLQVINLAAKLYLTNSKQTKLLT 542
Query: 455 QQVLSLATQDSDNPDLRDR 473
Q VLSLA D N D+RDR
Sbjct: 543 QYVLSLAKYDQ-NYDIRDR 560
Score = 62 (26.9 bits), Expect = 1.6e-24, Sum P(3) = 1.6e-24
Identities = 26/120 (21%), Positives = 55/120 (45%)
Query: 709 LAHANAAVVLSAVKVLMKLMEMLPGE-GDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNI 767
L++ + VV +V V+ KL++M P + G+ + L K V + + + ++
Sbjct: 437 LSNRDELVVAESVVVIKKLLQMQPAQHGEIIKHLAKLTDNIQVPM--ARASILWLIGEYC 494
Query: 768 NLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIK 827
+ + PD+L+ K F + + VKL+ +++ +L N Q + Q + + K
Sbjct: 495 EHVPKIAPDVLRKMAKSFTAEED---IVKLQVINLAAKLYL-TNSKQTKLLTQYVLSLAK 550
Score = 48 (22.0 bits), Expect = 4.4e-23, Sum P(3) = 4.4e-23
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 560 PLIRALAVRTMG--CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 614
P+ RA + +G C V KI + + K E+ V+ AKLY N++
Sbjct: 480 PMARASILWLIGEYCEHVPKIAPDVLRKMAKSFTAEEDIVKLQVINLAAKLYLTNSK 536
Score = 47 (21.6 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 19/81 (23%), Positives = 45/81 (55%)
Query: 301 VQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKL--DIMIRLASQANIAQVL 358
VQ ++ R+ L+V + ++K +++ ++ + I L KL +I + +A +A+I ++
Sbjct: 434 VQLLSNRD-ELVVAESVVVIKKLLQMQPAQHGE-IIKHLAKLTDNIQVPMA-RASILWLI 490
Query: 359 SELKEYATEVDVDFVRKAVRA 379
E E+ ++ D +RK ++
Sbjct: 491 GEYCEHVPKIAPDVLRKMAKS 511
Score = 41 (19.5 bits), Expect = 2.3e-22, Sum P(3) = 2.3e-22
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 622 LDQLKDLLSDSNPMVVANAVAALSEM 647
L+ L LLS+ + +VVA +V + ++
Sbjct: 430 LNGLVQLLSNRDELVVAESVVVIKKL 455
>UNIPROTKB|E1BME2 [details] [associations]
symbol:AP3B2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048490 "anterograde synaptic vesicle transport"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0044431
"Golgi apparatus part" evidence=IEA] [GO:0030123 "AP-3 adaptor
complex" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR026739 InterPro:IPR026740 Pfam:PF01602
PIRSF:PIRSF037096 InterPro:IPR013041 InterPro:IPR008153
GO:GO:0005634 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 PANTHER:PTHR11134 SUPFAM:SSF49348
Gene3D:2.60.40.1230 GO:GO:0044431 GeneTree:ENSGT00530000063546
KO:K12397 GO:GO:0030123 PANTHER:PTHR11134:SF1 CTD:8120 OMA:ANLGRVP
EMBL:DAAA02052226 IPI:IPI00923881 RefSeq:NP_001230264.1
UniGene:Bt.10002 Ensembl:ENSBTAT00000061606 GeneID:784163
KEGG:bta:784163 NextBio:20926528 ArrayExpress:E1BME2 Uniprot:E1BME2
Length = 1085
Score = 318 (117.0 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 75/212 (35%), Positives = 121/212 (57%)
Query: 480 LLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKS 539
+L T N + L + ++A + GK+ S LFP VV + N+E+KKLVY+YL+ YA+
Sbjct: 45 MLDT-NKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEE 103
Query: 540 HPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRK 599
D+A+++++TF + +D N LIRA A+R + IRV I + +++ D PYVRK
Sbjct: 104 QQDLALLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRK 163
Query: 600 TAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIE 659
TAA + KLY +++ +DQ ++ ++ LL+D +V + V A E+ + LI
Sbjct: 164 TAAHAIPKLYSLDSDQ-KDQ-LIEVIEKLLADKTTLVAGSVVMAFEEV---CPERIDLIH 218
Query: 660 MNAQTINKLLTALNECTEWGQVFILDSLSNYS 691
N + KL L + EWGQV I+ L+ Y+
Sbjct: 219 KNYR---KLCNLLIDVEEWGQVVIISMLTRYA 247
Score = 220 (82.5 bits), Expect = 1.3e-30, Sum P(3) = 1.3e-30
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 287 LAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMI 346
+A LV LL S EVQYV L+N+ + KR + + +K F+++ DP +K+ KL+++
Sbjct: 340 IAKALVRLLRSHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLT 399
Query: 347 RLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK 405
LA++ NI VL E + Y +D DFV ++AIGRCA + + + C++ L+ L+ +
Sbjct: 400 NLANETNIPTVLREFQTYIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNR 458
Score = 140 (54.3 bits), Expect = 1.3e-30, Sum P(3) = 1.3e-30
Identities = 46/164 (28%), Positives = 84/164 (51%)
Query: 17 ELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNY 76
+LK L+++ +A + GK+ S LFP VV + N+E+KKLVY+YL+ Y
Sbjct: 41 DLKAMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRY 100
Query: 77 AKSHPDMAIMAFSTFFYQKS---------SSSFQCMIDIRSIPLFDLCSSVGVFVKDC-E 126
A+ D+A+++ STF Q+ +S+ + + IR +P+ + + + +K+
Sbjct: 101 AEEQQDLALLSISTF--QRGLKDPNQLIRASALRVLSSIR-VPI--IVPIMMLAIKEAAS 155
Query: 127 DSNPLIR---ALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYV 167
D +P +R A A+ + + D+ + L E + K L D+ V
Sbjct: 156 DMSPYVRKTAAHAIPKLYSLDSDQ-KDQLIEVIEKLLADKTTLV 198
Score = 136 (52.9 bits), Expect = 3.3e-30, Sum P(3) = 3.3e-30
Identities = 31/89 (34%), Positives = 51/89 (57%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ F + +D N LIRA A+R + IRV I + +++ D PYVRKTAA +
Sbjct: 111 SISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIP 170
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KLY +++ +DQ ++ ++ LL+D +
Sbjct: 171 KLYSLDSDQ-KDQ-LIEVIEKLLADKTTL 197
Score = 132 (51.5 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 36/121 (29%), Positives = 61/121 (50%)
Query: 695 DREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLS 754
D + + + P L +AAVV++ ++ L V + K L V LL
Sbjct: 299 DPDHRLLLRNTKPLLQSRSAAVVMAVAQLYFHLAPKAE-----VGVIAKAL----VRLLR 349
Query: 755 SEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQ 814
S EVQYV L+N+ + KR + + +K F+++ DP +K+ KL+++ LA++ NI
Sbjct: 350 SHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPT 409
Query: 815 V 815
V
Sbjct: 410 V 410
Score = 119 (46.9 bits), Expect = 1.4e-40, Sum P(3) = 1.4e-40
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 818 VVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERI 871
VV E++VVIK + + P ++ II L + D + P ARAS++W+IGEY E +
Sbjct: 462 VVAESVVVIKKLLQMQPAQHGEIIKHLAKLTDNIQVPMARASILWLIGEYCEHV 515
Score = 101 (40.6 bits), Expect = 9.2e-29, Sum P(3) = 9.2e-29
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 396 STLLDLIQTKYAERIDN-ADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELV 454
+++L LI +Y E + A ++L + F E V+LQ++ KL+L T+ L
Sbjct: 502 ASILWLIG-EYCEHVPRIAPDVLRKMAKSFTAEEDIVKLQVINLAAKLYLTNSKQTKLLT 560
Query: 455 QQVLSLATQDSDNPDLRDR 473
Q VLSLA D N D+RDR
Sbjct: 561 QYVLSLAKYDQ-NYDIRDR 578
Score = 62 (26.9 bits), Expect = 9.9e-25, Sum P(3) = 9.9e-25
Identities = 26/120 (21%), Positives = 55/120 (45%)
Query: 709 LAHANAAVVLSAVKVLMKLMEMLPGE-GDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNI 767
L++ + VV +V V+ KL++M P + G+ + L K V + + + ++
Sbjct: 455 LSNRDELVVAESVVVIKKLLQMQPAQHGEIIKHLAKLTDNIQVPM--ARASILWLIGEYC 512
Query: 768 NLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIK 827
+ + PD+L+ K F + + VKL+ +++ +L N Q + Q + + K
Sbjct: 513 EHVPRIAPDVLRKMAKSFTAEED---IVKLQVINLAAKLYL-TNSKQTKLLTQYVLSLAK 568
Score = 46 (21.3 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 19/81 (23%), Positives = 44/81 (54%)
Query: 301 VQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKL--DIMIRLASQANIAQVL 358
VQ ++ R+ L+V + ++K +++ ++ + I L KL +I + +A +A+I ++
Sbjct: 452 VQLLSNRD-ELVVAESVVVIKKLLQMQPAQHGE-IIKHLAKLTDNIQVPMA-RASILWLI 508
Query: 359 SELKEYATEVDVDFVRKAVRA 379
E E+ + D +RK ++
Sbjct: 509 GEYCEHVPRIAPDVLRKMAKS 529
Score = 45 (20.9 bits), Expect = 5.6e-23, Sum P(3) = 5.6e-23
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 560 PLIRALAVRTMG--CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 614
P+ RA + +G C V +I + + K E+ V+ AKLY N++
Sbjct: 498 PMARASILWLIGEYCEHVPRIAPDVLRKMAKSFTAEEDIVKLQVINLAAKLYLTNSK 554
Score = 41 (19.5 bits), Expect = 1.4e-22, Sum P(3) = 1.4e-22
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 622 LDQLKDLLSDSNPMVVANAVAALSEM 647
L+ L LLS+ + +VVA +V + ++
Sbjct: 448 LNGLVQLLSNRDELVVAESVVVIKKL 473
>UNIPROTKB|B7ZKS0 [details] [associations]
symbol:AP3B2 "AP-3 complex subunit beta-2" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0044431 "Golgi apparatus part" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR026739 InterPro:IPR026740 Pfam:PF01602
PIRSF:PIRSF037096 InterPro:IPR013041 InterPro:IPR008153
GO:GO:0005634 GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 SUPFAM:SSF49348 Gene3D:2.60.40.1230 GO:GO:0044431
HOVERGEN:HBG050519 GO:GO:0030123 PANTHER:PTHR11134:SF1
UniGene:Hs.199593 HGNC:HGNC:567 OMA:ANLGRVP EMBL:AC105339
EMBL:FJ695193 EMBL:BC143346 IPI:IPI01015491 SMR:B7ZKS0
STRING:B7ZKS0 Ensembl:ENST00000535359 UCSC:uc010uoi.2
Uniprot:B7ZKS0
Length = 1101
Score = 318 (117.0 bits), Expect = 1.5e-40, Sum P(3) = 1.5e-40
Identities = 75/212 (35%), Positives = 121/212 (57%)
Query: 480 LLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKS 539
+L T N + L + ++A + GK+ S LFP VV + N+E+KKLVY+YL+ YA+
Sbjct: 45 MLDT-NKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEE 103
Query: 540 HPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRK 599
D+A+++++TF + +D N LIRA A+R + IRV I + +++ D PYVRK
Sbjct: 104 QQDLALLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRK 163
Query: 600 TAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIE 659
TAA + KLY +++ +DQ ++ ++ LL+D +V + V A E+ + LI
Sbjct: 164 TAAHAIPKLYSLDSDQ-KDQ-LIEVIEKLLADKTTLVAGSVVMAFEEV---CPERIDLIH 218
Query: 660 MNAQTINKLLTALNECTEWGQVFILDSLSNYS 691
N + KL L + EWGQV I+ L+ Y+
Sbjct: 219 KNYR---KLCNLLIDVEEWGQVVIISMLTRYA 247
Score = 220 (82.5 bits), Expect = 2.1e-30, Sum P(3) = 2.1e-30
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 287 LAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMI 346
+A LV LL S EVQYV L+N+ + KR + + +K F+++ DP +K+ KL+++
Sbjct: 340 IAKALVRLLRSHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLT 399
Query: 347 RLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK 405
LA++ NI VL E + Y +D DFV ++AIGRCA + + + C++ L+ L+ +
Sbjct: 400 NLANETNIPTVLREFQTYIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNR 458
Score = 138 (53.6 bits), Expect = 2.1e-30, Sum P(3) = 2.1e-30
Identities = 46/164 (28%), Positives = 84/164 (51%)
Query: 17 ELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNY 76
+LK L+++ +A + GK+ S LFP VV + N+E+KKLVY+YL+ Y
Sbjct: 41 DLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRY 100
Query: 77 AKSHPDMAIMAFSTFFYQKS---------SSSFQCMIDIRSIPLFDLCSSVGVFVKDC-E 126
A+ D+A+++ STF Q+ +S+ + + IR +P+ + + + +K+
Sbjct: 101 AEEQQDLALLSISTF--QRGLKDPNQLIRASALRVLSSIR-VPI--IVPIMMLAIKEAAS 155
Query: 127 DSNPLIR---ALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYV 167
D +P +R A A+ + + D+ + L E + K L D+ V
Sbjct: 156 DMSPYVRKTAAHAIPKLYSLDSDQ-KDQLIEVIEKLLADKTTLV 198
Score = 136 (52.9 bits), Expect = 3.5e-30, Sum P(3) = 3.5e-30
Identities = 31/89 (34%), Positives = 51/89 (57%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ F + +D N LIRA A+R + IRV I + +++ D PYVRKTAA +
Sbjct: 111 SISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIP 170
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KLY +++ +DQ ++ ++ LL+D +
Sbjct: 171 KLYSLDSDQ-KDQ-LIEVIEKLLADKTTL 197
Score = 132 (51.5 bits), Expect = 1.5e-40, Sum P(3) = 1.5e-40
Identities = 36/121 (29%), Positives = 61/121 (50%)
Query: 695 DREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLS 754
D + + + P L +AAVV++ ++ L V + K L V LL
Sbjct: 299 DPDHRLLLRNTKPLLQSRSAAVVMAVAQLYFHLAPKAE-----VGVIAKAL----VRLLR 349
Query: 755 SEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQ 814
S EVQYV L+N+ + KR + + +K F+++ DP +K+ KL+++ LA++ NI
Sbjct: 350 SHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPT 409
Query: 815 V 815
V
Sbjct: 410 V 410
Score = 119 (46.9 bits), Expect = 1.5e-40, Sum P(3) = 1.5e-40
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 818 VVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERI 871
VV E++VVIK + + P ++ II L + D + P ARAS++W+IGEY E +
Sbjct: 462 VVAESVVVIKKLLQMQPAQHGEIIKHLAKLTDNIQVPMARASILWLIGEYCEHV 515
Score = 101 (40.6 bits), Expect = 1.6e-28, Sum P(3) = 1.6e-28
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 396 STLLDLIQTKYAERIDN-ADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELV 454
+++L LI +Y E + A ++L + F E V+LQ++ KL+L T+ L
Sbjct: 502 ASILWLIG-EYCEHVPRIAPDVLRKMAKSFTAEEDIVKLQVINLAAKLYLTNSKQTKLLT 560
Query: 455 QQVLSLATQDSDNPDLRDR 473
Q VLSLA D N D+RDR
Sbjct: 561 QYVLSLAKYDQ-NYDIRDR 578
Score = 62 (26.9 bits), Expect = 1.7e-24, Sum P(3) = 1.7e-24
Identities = 26/120 (21%), Positives = 55/120 (45%)
Query: 709 LAHANAAVVLSAVKVLMKLMEMLPGE-GDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNI 767
L++ + VV +V V+ KL++M P + G+ + L K V + + + ++
Sbjct: 455 LSNRDELVVAESVVVIKKLLQMQPAQHGEIIKHLAKLTDNIQVPM--ARASILWLIGEYC 512
Query: 768 NLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIK 827
+ + PD+L+ K F + + VKL+ +++ +L N Q + Q + + K
Sbjct: 513 EHVPRIAPDVLRKMAKSFTAEED---IVKLQVINLAAKLYL-TNSKQTKLLTQYVLSLAK 568
Score = 46 (21.3 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 19/81 (23%), Positives = 44/81 (54%)
Query: 301 VQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKL--DIMIRLASQANIAQVL 358
VQ ++ R+ L+V + ++K +++ ++ + I L KL +I + +A +A+I ++
Sbjct: 452 VQLLSNRD-ELVVAESVVVIKKLLQMQPAQHGE-IIKHLAKLTDNIQVPMA-RASILWLI 508
Query: 359 SELKEYATEVDVDFVRKAVRA 379
E E+ + D +RK ++
Sbjct: 509 GEYCEHVPRIAPDVLRKMAKS 529
Score = 45 (20.9 bits), Expect = 9.5e-23, Sum P(3) = 9.5e-23
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 560 PLIRALAVRTMG--CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 614
P+ RA + +G C V +I + + K E+ V+ AKLY N++
Sbjct: 498 PMARASILWLIGEYCEHVPRIAPDVLRKMAKSFTAEEDIVKLQVINLAAKLYLTNSK 554
Score = 41 (19.5 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 622 LDQLKDLLSDSNPMVVANAVAALSEM 647
L+ L LLS+ + +VVA +V + ++
Sbjct: 448 LNGLVQLLSNRDELVVAESVVVIKKL 473
>UNIPROTKB|J9P1J6 [details] [associations]
symbol:AP3B2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 SUPFAM:SSF49348 GeneTree:ENSGT00530000063546
GO:GO:0030123 PANTHER:PTHR11134:SF1 OMA:ANLGRVP EMBL:AAEX03002348
EMBL:AAEX03002349 EMBL:AAEX03002347 Ensembl:ENSCAFT00000049658
Uniprot:J9P1J6
Length = 1102
Score = 318 (117.0 bits), Expect = 1.6e-40, Sum P(3) = 1.6e-40
Identities = 75/212 (35%), Positives = 121/212 (57%)
Query: 480 LLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKS 539
+L T N + L + ++A + GK+ S LFP VV + N+E+KKLVY+YL+ YA+
Sbjct: 88 MLDT-NKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEE 146
Query: 540 HPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRK 599
D+A+++++TF + +D N LIRA A+R + IRV I + +++ D PYVRK
Sbjct: 147 QQDLALLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRK 206
Query: 600 TAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIE 659
TAA + KLY +++ +DQ ++ ++ LL+D +V + V A E+ + LI
Sbjct: 207 TAAHAIPKLYSLDSDQ-KDQ-LIEVIEKLLADKTTLVAGSVVMAFEEV---CPERIDLIH 261
Query: 660 MNAQTINKLLTALNECTEWGQVFILDSLSNYS 691
N + KL L + EWGQV I+ L+ Y+
Sbjct: 262 KNYR---KLCNLLIDVEEWGQVVIISMLTRYA 290
Score = 220 (82.5 bits), Expect = 2.2e-30, Sum P(3) = 2.2e-30
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 287 LAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMI 346
+A LV LL S EVQYV L+N+ + KR + + +K F+++ DP +K+ KL+++
Sbjct: 383 IAKALVRLLRSHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLT 442
Query: 347 RLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK 405
LA++ NI VL E + Y +D DFV ++AIGRCA + + + C++ L+ L+ +
Sbjct: 443 NLANETNIPTVLREFQTYIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNR 501
Score = 138 (53.6 bits), Expect = 2.2e-30, Sum P(3) = 2.2e-30
Identities = 46/164 (28%), Positives = 84/164 (51%)
Query: 17 ELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNY 76
+LK L+++ +A + GK+ S LFP VV + N+E+KKLVY+YL+ Y
Sbjct: 84 DLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRY 143
Query: 77 AKSHPDMAIMAFSTFFYQKS---------SSSFQCMIDIRSIPLFDLCSSVGVFVKDC-E 126
A+ D+A+++ STF Q+ +S+ + + IR +P+ + + + +K+
Sbjct: 144 AEEQQDLALLSISTF--QRGLKDPNQLIRASALRVLSSIR-VPI--IVPIMMLAIKEAAS 198
Query: 127 DSNPLIR---ALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYV 167
D +P +R A A+ + + D+ + L E + K L D+ V
Sbjct: 199 DMSPYVRKTAAHAIPKLYSLDSDQ-KDQLIEVIEKLLADKTTLV 241
Score = 136 (52.9 bits), Expect = 3.5e-30, Sum P(3) = 3.5e-30
Identities = 31/89 (34%), Positives = 51/89 (57%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ F + +D N LIRA A+R + IRV I + +++ D PYVRKTAA +
Sbjct: 154 SISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIP 213
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KLY +++ +DQ ++ ++ LL+D +
Sbjct: 214 KLYSLDSDQ-KDQ-LIEVIEKLLADKTTL 240
Score = 132 (51.5 bits), Expect = 1.6e-40, Sum P(3) = 1.6e-40
Identities = 36/121 (29%), Positives = 61/121 (50%)
Query: 695 DREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLS 754
D + + + P L +AAVV++ ++ L V + K L V LL
Sbjct: 342 DPDHRLLLRNTKPLLQSRSAAVVMAVAQLYFHLAPKAE-----VGVIAKAL----VRLLR 392
Query: 755 SEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQ 814
S EVQYV L+N+ + KR + + +K F+++ DP +K+ KL+++ LA++ NI
Sbjct: 393 SHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPT 452
Query: 815 V 815
V
Sbjct: 453 V 453
Score = 119 (46.9 bits), Expect = 1.6e-40, Sum P(3) = 1.6e-40
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 818 VVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERI 871
VV E++VVIK + + P ++ II L + D + P ARAS++W+IGEY E +
Sbjct: 505 VVAESVVVIKKLLQMQPAQHGEIIKHLAKLTDNIQVPMARASILWLIGEYCEHV 558
Score = 101 (40.6 bits), Expect = 1.6e-28, Sum P(3) = 1.6e-28
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 396 STLLDLIQTKYAERIDN-ADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELV 454
+++L LI +Y E + A ++L + F E V+LQ++ KL+L T+ L
Sbjct: 545 ASILWLIG-EYCEHVPKIAPDVLRKMAKSFTAEEDIVKLQVINLAAKLYLTNSKQTKLLT 603
Query: 455 QQVLSLATQDSDNPDLRDR 473
Q VLSLA D N D+RDR
Sbjct: 604 QYVLSLAKYDQ-NYDIRDR 621
Score = 62 (26.9 bits), Expect = 1.7e-24, Sum P(3) = 1.7e-24
Identities = 26/120 (21%), Positives = 55/120 (45%)
Query: 709 LAHANAAVVLSAVKVLMKLMEMLPGE-GDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNI 767
L++ + VV +V V+ KL++M P + G+ + L K V + + + ++
Sbjct: 498 LSNRDELVVAESVVVIKKLLQMQPAQHGEIIKHLAKLTDNIQVPM--ARASILWLIGEYC 555
Query: 768 NLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIK 827
+ + PD+L+ K F + + VKL+ +++ +L N Q + Q + + K
Sbjct: 556 EHVPKIAPDVLRKMAKSFTAEED---IVKLQVINLAAKLYL-TNSKQTKLLTQYVLSLAK 611
Score = 48 (22.0 bits), Expect = 4.7e-23, Sum P(3) = 4.7e-23
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 560 PLIRALAVRTMG--CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 614
P+ RA + +G C V KI + + K E+ V+ AKLY N++
Sbjct: 541 PMARASILWLIGEYCEHVPKIAPDVLRKMAKSFTAEEDIVKLQVINLAAKLYLTNSK 597
Score = 47 (21.6 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 19/81 (23%), Positives = 45/81 (55%)
Query: 301 VQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKL--DIMIRLASQANIAQVL 358
VQ ++ R+ L+V + ++K +++ ++ + I L KL +I + +A +A+I ++
Sbjct: 495 VQLLSNRD-ELVVAESVVVIKKLLQMQPAQHGE-IIKHLAKLTDNIQVPMA-RASILWLI 551
Query: 359 SELKEYATEVDVDFVRKAVRA 379
E E+ ++ D +RK ++
Sbjct: 552 GEYCEHVPKIAPDVLRKMAKS 572
Score = 41 (19.5 bits), Expect = 2.5e-22, Sum P(3) = 2.5e-22
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 622 LDQLKDLLSDSNPMVVANAVAALSEM 647
L+ L LLS+ + +VVA +V + ++
Sbjct: 491 LNGLVQLLSNRDELVVAESVVVIKKL 516
>UNIPROTKB|E1BW97 [details] [associations]
symbol:AP3B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0006622 "protein targeting to lysosome" evidence=IEA]
[GO:0007596 "blood coagulation" evidence=IEA] [GO:0008089
"anterograde axon cargo transport" evidence=IEA] [GO:0019903
"protein phosphatase binding" evidence=IEA] [GO:0032438 "melanosome
organization" evidence=IEA] [GO:0048007 "antigen processing and
presentation, exogenous lipid antigen via MHC class Ib"
evidence=IEA] [GO:0048490 "anterograde synaptic vesicle transport"
evidence=IEA] [GO:0051138 "positive regulation of NK T cell
differentiation" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 PANTHER:PTHR11134 GO:GO:0032438
GeneTree:ENSGT00530000063546 OMA:KRIVGMI GO:GO:0030123
GO:GO:0048007 GO:GO:0051138 GO:GO:0006622 PANTHER:PTHR11134:SF1
EMBL:AADN02046168 EMBL:AADN02046169 EMBL:AADN02046170
EMBL:AADN02046171 EMBL:AADN02046172 EMBL:AADN02046173
EMBL:AADN02046174 EMBL:AADN02046175 EMBL:AADN02046176
EMBL:AADN02046177 EMBL:AADN02046178 EMBL:AADN02046179
EMBL:AADN02046180 EMBL:AADN02046181 EMBL:AADN02046182
EMBL:AADN02046183 EMBL:AADN02046184 EMBL:AADN02046185
EMBL:AADN02046186 EMBL:AADN02046187 EMBL:AADN02046188
EMBL:AADN02046189 IPI:IPI00585450 Ensembl:ENSGALT00000006998
Uniprot:E1BW97
Length = 1100
Score = 306 (112.8 bits), Expect = 2.4e-40, Sum P(3) = 2.4e-40
Identities = 69/201 (34%), Positives = 114/201 (56%)
Query: 491 LHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNT 550
L + ++ + GK+ S LFP VV + + N+E+KKLVY+YLM YA+ D+A+++++T
Sbjct: 61 LDAMKRIVGMIAKGKNASELFPAVVKNVASKNIEIKKLVYVYLMRYAEEQQDLALLSIST 120
Query: 551 FVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYD 610
F + +D N LIRA A+R + IRV I + +++ D PYVRK AA + KLY
Sbjct: 121 FQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEASSDLSPYVRKNAAHAIQKLYS 180
Query: 611 INAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLT 670
++ + + + ++ ++ LL D + +V + V A E+ + LI N + KL
Sbjct: 181 LDPE--QKEMLIEVIEKLLRDRSTLVAGSVVMAFEEV---CPDRIDLIHKNYR---KLCN 232
Query: 671 ALNECTEWGQVFILDSLSNYS 691
L + EWGQV I+ L+ Y+
Sbjct: 233 LLVDVEEWGQVVIIHMLTRYA 253
Score = 208 (78.3 bits), Expect = 1.9e-24, Sum P(3) = 1.9e-24
Identities = 51/157 (32%), Positives = 85/157 (54%)
Query: 287 LAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMI 346
++ LV LL S EVQY+ L+NI + +R + + +K F+V+ DP +K KL+IM
Sbjct: 338 ISKSLVRLLRSNREVQYIVLQNIATMSIQRKGMFEPYLKSFYVRSTDPTMIKTLKLEIMT 397
Query: 347 RLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK- 405
LA++ANI+ +L E + Y D F ++AIGRCA + + + C++ L+ L+ +
Sbjct: 398 NLANEANISTLLREFQTYVKSQDKQFAAATIQAIGRCATNISEVTDTCLNGLVCLLSNRD 457
Query: 406 ---YAERIDNADELLESFLEGFHDENTQVQLQLLTAI 439
AE + +LL++ H E + +LL I
Sbjct: 458 EIVVAESVVVIKKLLQT-QPAHHGEIIKHMAKLLDNI 493
Score = 160 (61.4 bits), Expect = 1.9e-24, Sum P(3) = 1.9e-24
Identities = 51/175 (29%), Positives = 90/175 (51%)
Query: 6 YFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLEL 65
+ + TKK E +LK L S + + GK+ S LFP VV + + N+E+
Sbjct: 38 FSSDTKKNE--DLKQMLESSKDSAKLDAMKRIVGMIAKGKNASELFPAVVKNVASKNIEI 95
Query: 66 KKLVYLYLMNYAKSHPDMAIMAFSTFFYQKS---------SSSFQCMIDIRSIPLFDLCS 116
KKLVY+YLM YA+ D+A+++ STF Q++ +S+ + + IR +P+ +
Sbjct: 96 KKLVYVYLMRYAEEQQDLALLSISTF--QRALKDPNQLIRASALRVLSSIR-VPI--IVP 150
Query: 117 SVGVFVKDCE-DSNPLIR---ALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYV 167
+ + +K+ D +P +R A A++ + + ++ E L E + K L+D V
Sbjct: 151 IMMLAIKEASSDLSPYVRKNAAHAIQKLYSLDPEQ-KEMLIEVIEKLLRDRSTLV 204
Score = 138 (53.6 bits), Expect = 2.4e-40, Sum P(3) = 2.4e-40
Identities = 39/119 (32%), Positives = 61/119 (51%)
Query: 695 DREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLS 754
D + + + P L NAAVV++ ++ L E +S LV LL
Sbjct: 297 DPDHRLLLRNTKPLLQSRNAAVVMAVAQLYWHLAPK--SEAGIISK-------SLVRLLR 347
Query: 755 SEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIA 813
S EVQY+ L+NI + +R + + +K F+V+ DP +K KL+IM LA++ANI+
Sbjct: 348 SNREVQYIVLQNIATMSIQRKGMFEPYLKSFYVRSTDPTMIKTLKLEIMTNLANEANIS 406
Score = 124 (48.7 bits), Expect = 2.4e-40, Sum P(3) = 2.4e-40
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 818 VVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERI 871
VV E++VVIK + + P + II + + LD + P ARAS++W+IGEY ER+
Sbjct: 460 VVAESVVVIKKLLQTQPAHHGEIIKHMAKLLDNITVPVARASILWLIGEYCERV 513
Score = 123 (48.4 bits), Expect = 1.7e-20, Sum P(3) = 1.7e-20
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ F + +D N LIRA A+R + IRV I + +++ D PYVRK AA +
Sbjct: 117 SISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEASSDLSPYVRKNAAHAIQ 176
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KLY ++ + + + ++ ++ LL D + +
Sbjct: 177 KLYSLDPE--QKEMLIEVIEKLLRDRSTL 203
Score = 97 (39.2 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 396 STLLDLIQTKYAERIDN-ADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELV 454
+++L LI +Y ER+ A ++L + F +E+ V+LQ+L KL+L T+ L
Sbjct: 500 ASILWLIG-EYCERVPKIAPDVLRKTAKSFTNEDDLVKLQILNLGAKLYLTNSKQTKLLT 558
Query: 455 QQVLSLATQDSDNPDLRDR 473
Q VL+L D D+RDR
Sbjct: 559 QYVLNLGKYDQSY-DIRDR 576
Score = 52 (23.4 bits), Expect = 1.9e-24, Sum P(3) = 1.9e-24
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 560 PLIRALAVRTMG--CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 614
P+ RA + +G C RV KI + K +ED V+ AKLY N++
Sbjct: 496 PVARASILWLIGEYCERVPKIAPDVLRKTAKSFTNEDDLVKLQILNLGAKLYLTNSK 552
Score = 42 (19.8 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 24/101 (23%), Positives = 48/101 (47%)
Query: 280 VSTLTKKLAPPLVTLLSSEPEVQYV-ALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 338
+S +T LV LLS+ E+ ++ I ++Q +P H ++ +K+ K
Sbjct: 438 ISEVTDTCLNGLVCLLSNRDEIVVAESVVVIKKLLQTQP---AHHGEI--IKH----MAK 488
Query: 339 LEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRA 379
L LD + ++A+I ++ E E ++ D +RK ++
Sbjct: 489 L--LDNITVPVARASILWLIGEYCERVPKIAPDVLRKTAKS 527
Score = 40 (19.1 bits), Expect = 2.4e-14, Sum P(3) = 2.4e-14
Identities = 25/125 (20%), Positives = 51/125 (40%)
Query: 526 KKLVYLYLMNYAKSHPDMAIMAVNTFVKD--CEDSNP-LIRALAVRTMGCIRVDKITEYL 582
+++ Y+ L N A M ++K ++P +I+ L + M + + L
Sbjct: 350 REVQYIVLQNIATMSIQRKGM-FEPYLKSFYVRSTDPTMIKTLKLEIMTNLANEANISTL 408
Query: 583 CEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVA 642
+ +K +D + + N V D L+ L LLS+ + +VVA +V
Sbjct: 409 LREFQTYVKSQDKQFAAATIQAIGRCAT-NISEVTDT-CLNGLVCLLSNRDEIVVAESVV 466
Query: 643 ALSEM 647
+ ++
Sbjct: 467 VIKKL 471
Score = 38 (18.4 bits), Expect = 5.4e-23, Sum P(3) = 5.4e-23
Identities = 6/26 (23%), Positives = 18/26 (69%)
Query: 448 TDTQELVQQVLSLATQDSDNPDLRDR 473
++++E ++ S A ++SD+ D++ +
Sbjct: 730 SESEESTEKKTSGAAEESDSEDIKKK 755
>UNIPROTKB|F1S2G1 [details] [associations]
symbol:F1S2G1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 GeneTree:ENSGT00530000063546 OMA:KRIVGMI
GO:GO:0030123 PANTHER:PTHR11134:SF1 EMBL:CU462946 EMBL:CU657913
Ensembl:ENSSSCT00000015403 Uniprot:F1S2G1
Length = 1058
Score = 302 (111.4 bits), Expect = 8.8e-40, Sum P(3) = 8.8e-40
Identities = 68/201 (33%), Positives = 114/201 (56%)
Query: 491 LHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNT 550
L + ++ + GK+ S LFP VV + + N+E+KKLVY+YL+ YA+ D+A+++++T
Sbjct: 25 LDAMKRIVGMIAKGKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSIST 84
Query: 551 FVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYD 610
F + +D N LIRA A+R + IRV I + +++ D PYVRK AA + KLY
Sbjct: 85 FQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYS 144
Query: 611 INAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLT 670
++ + + + ++ ++ LL D + +V + V A E+ + LI N + KL
Sbjct: 145 LDPE--QKEMLIEIIEKLLKDKSTLVAGSVVMAFEEV---CPDRIDLIHKNYR---KLCN 196
Query: 671 ALNECTEWGQVFILDSLSNYS 691
L + EWGQV I+ L+ Y+
Sbjct: 197 LLVDVEEWGQVVIIHMLTRYA 217
Score = 211 (79.3 bits), Expect = 1.6e-30, Sum P(3) = 1.6e-30
Identities = 41/119 (34%), Positives = 71/119 (59%)
Query: 287 LAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMI 346
++ PLV LL S EVQY+ L+NI + +R + + +K F+V+ DP +K+ KL+I+
Sbjct: 300 ISKPLVRLLRSNREVQYIVLQNIATMSIQRKGMFEPYLKSFYVRSTDPTMIKILKLEILT 359
Query: 347 RLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK 405
LA++ANI+ +L E + Y D F ++ IGRCA + + + C++ L+ L+ +
Sbjct: 360 NLANEANISTLLREFQTYVKSQDKQFAAATIQTIGRCATNISEVTDTCLNGLVCLLSNR 418
Score = 150 (57.9 bits), Expect = 1.6e-30, Sum P(3) = 1.6e-30
Identities = 47/164 (28%), Positives = 86/164 (52%)
Query: 17 ELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNY 76
+LK L S+ + + GK+ S LFP VV + + N+E+KKLVY+YL+ Y
Sbjct: 11 DLKQMLESNKDSAKLDAMKRIVGMIAKGKNASELFPAVVKNVASKNIEIKKLVYVYLVRY 70
Query: 77 AKSHPDMAIMAFSTFFYQKS---------SSSFQCMIDIRSIPLFDLCSSVGVFVKDCE- 126
A+ D+A+++ STF Q++ +S+ + + IR +P+ + + + +K+
Sbjct: 71 AEEQQDLALLSISTF--QRALKDPNQLIRASALRVLSSIR-VPI--IVPIMMLAIKEASA 125
Query: 127 DSNPLIR---ALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYV 167
D +P +R A A++ + + ++ E L E + K LKD+ V
Sbjct: 126 DLSPYVRKNAAHAIQKLYSLDPEQ-KEMLIEIIEKLLKDKSTLV 168
Score = 143 (55.4 bits), Expect = 8.8e-40, Sum P(3) = 8.8e-40
Identities = 39/119 (32%), Positives = 65/119 (54%)
Query: 695 DREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLS 754
D + + + P L NAAVV++ ++ + E V ++K PLV LL
Sbjct: 259 DPDHRLLIRNTKPLLQSRNAAVVMAVAQLYWHIAPK--SE---VGIISK----PLVRLLR 309
Query: 755 SEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIA 813
S EVQY+ L+NI + +R + + +K F+V+ DP +K+ KL+I+ LA++ANI+
Sbjct: 310 SNREVQYIVLQNIATMSIQRKGMFEPYLKSFYVRSTDPTMIKILKLEILTNLANEANIS 368
Score = 123 (48.4 bits), Expect = 1.0e-27, Sum P(3) = 1.0e-27
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ F + +D N LIRA A+R + IRV I + +++ D PYVRK AA +
Sbjct: 81 SISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQ 140
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KLY ++ + + + ++ ++ LL D + +
Sbjct: 141 KLYSLDPE--QKEMLIEIIEKLLKDKSTL 167
Score = 117 (46.2 bits), Expect = 8.8e-40, Sum P(3) = 8.8e-40
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 818 VVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERI 871
VV E++VVIK + + P ++ II + + LD++ P ARAS++W+IGE ER+
Sbjct: 422 VVAESVVVIKKLLQMQPIQHGEIIKHMAKLLDSITVPVARASILWLIGENCERV 475
Score = 69 (29.3 bits), Expect = 1.5e-25, Sum P(3) = 1.5e-25
Identities = 25/99 (25%), Positives = 51/99 (51%)
Query: 709 LAHANAAVVLSAVKVLMKLMEMLPGE-GDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNI 767
L++ + VV +V V+ KL++M P + G+ + + K L +T+ + + ++ N
Sbjct: 415 LSNRDEIVVAESVVVIKKLLQMQPIQHGEIIKHMAKLLDS--ITVPVARASILWLIGENC 472
Query: 768 NLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRL 806
+ PD+L+ +M F +D VKL+ L++ +L
Sbjct: 473 ERVPIIAPDVLR-KMAKSFTSEDD--LVKLQILNLGAKL 508
Score = 55 (24.4 bits), Expect = 4.1e-24, Sum P(3) = 4.1e-24
Identities = 21/71 (29%), Positives = 32/71 (45%)
Query: 560 PLIRALAVRTMG--CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVE 617
P+ RA + +G C RV I + + K ED V+ AKLY N++ +
Sbjct: 458 PVARASILWLIGENCERVPIIAPDVLRKMAKSFTSEDDLVKLQILNLGAKLYLTNSRQDK 517
Query: 618 D--QGFLDQLK 626
D +G L +K
Sbjct: 518 DLEEGLLKNIK 528
Score = 54 (24.1 bits), Expect = 5.2e-24, Sum P(3) = 5.2e-24
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 413 ADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVL 458
A ++L + F E+ V+LQ+L KL+L ++L + +L
Sbjct: 479 APDVLRKMAKSFTSEDDLVKLQILNLGAKLYLTNSRQDKDLEEGLL 524
Score = 37 (18.1 bits), Expect = 3.0e-22, Sum P(3) = 3.0e-22
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 622 LDQLKDLLSDSNPMVVANAVAALSEM 647
L+ L LLS+ + +VVA +V + ++
Sbjct: 408 LNGLVCLLSNRDEIVVAESVVVIKKL 433
Score = 37 (18.1 bits), Expect = 5.3e-06, Sum P(3) = 5.3e-06
Identities = 20/100 (20%), Positives = 46/100 (46%)
Query: 280 VSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKL 339
+S +T LV LLS+ E+ +V + ++K +++ +++ + I
Sbjct: 400 ISEVTDTCLNGLVCLLSNRDEI----------VVAESVVVIKKLLQMQPIQHGEIIKHMA 449
Query: 340 EKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRA 379
+ LD + ++A+I ++ E E + D +RK ++
Sbjct: 450 KLLDSITVPVARASILWLIGENCERVPIIAPDVLRKMAKS 489
>UNIPROTKB|Q7YRF1 [details] [associations]
symbol:AP3B1 "AP-3 complex subunit beta-1" species:9615
"Canis lupus familiaris" [GO:0048490 "anterograde synaptic vesicle
transport" evidence=ISS] [GO:0008089 "anterograde axon cargo
transport" evidence=ISS] [GO:0030665 "clathrin-coated vesicle
membrane" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0030123 "AP-3 adaptor
complex" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR026739 InterPro:IPR026740 Pfam:PF01602
PIRSF:PIRSF037096 GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006897 GO:GO:0008089
eggNOG:COG5096 GO:GO:0030665 PANTHER:PTHR11134 CTD:8546
HOGENOM:HOG000033978 HOVERGEN:HBG050519 KO:K12397 OrthoDB:EOG4H729X
GO:GO:0030123 GO:GO:0048490 PANTHER:PTHR11134:SF1 EMBL:AY221640
RefSeq:NP_001002974.1 UniGene:Cfa.169 ProteinModelPortal:Q7YRF1
STRING:Q7YRF1 PRIDE:Q7YRF1 GeneID:403459 KEGG:cfa:403459
InParanoid:Q7YRF1 NextBio:20816977 Uniprot:Q7YRF1
Length = 1091
Score = 303 (111.7 bits), Expect = 1.3e-39, Sum P(3) = 1.3e-39
Identities = 68/201 (33%), Positives = 114/201 (56%)
Query: 491 LHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNT 550
L + ++ + GK+ S LFP VV + + N+E+KKLVY+YL+ YA+ D+A+++++T
Sbjct: 60 LDAMKRIVGMIAKGKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSIST 119
Query: 551 FVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYD 610
F + +D N LIRA A+R + IRV I + +++ D PYVRK AA + KLY
Sbjct: 120 FQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYS 179
Query: 611 INAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLT 670
++ + + + ++ ++ LL D + +V + V A E+ + LI N + KL
Sbjct: 180 LDPE--QKEMLIEVIEKLLKDKSTLVAGSVVMAFEEV---CPDRIDLIHKNYR---KLCN 231
Query: 671 ALNECTEWGQVFILDSLSNYS 691
L + EWGQV I+ L+ Y+
Sbjct: 232 LLVDVEEWGQVVIIHMLTRYA 252
Score = 211 (79.3 bits), Expect = 1.4e-24, Sum P(3) = 1.4e-24
Identities = 51/157 (32%), Positives = 86/157 (54%)
Query: 287 LAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMI 346
++ LV LL S EVQY+ L+NI + +R +L+ +K F+V+ DP +K+ KL+I+
Sbjct: 335 ISKSLVRLLRSNREVQYIVLQNIATMSIQRKGMLEPYLKSFYVRSTDPTMIKILKLEILT 394
Query: 347 RLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK- 405
LA++ANI+ +L E + Y D F ++ IGRCA + + + C+S L+ L+ +
Sbjct: 395 NLANEANISTLLREFQTYVKSQDKQFAAATIQTIGRCATSISEVTDTCLSGLVCLLSNRD 454
Query: 406 ---YAERIDNADELLESFLEGFHDENTQVQLQLLTAI 439
AE + +LL+ H E + +LL +I
Sbjct: 455 EIVVAESVVVIKKLLQ-MQPAQHGEIIKHMAKLLDSI 490
Score = 155 (59.6 bits), Expect = 1.4e-24, Sum P(3) = 1.4e-24
Identities = 50/170 (29%), Positives = 89/170 (52%)
Query: 11 KKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVY 70
KK E +LK L S+ + + GK+ S LFP VV + + N+E+KKLVY
Sbjct: 42 KKNE--DLKQMLESNKDSAKLDAMKRIVGMIAKGKNASELFPAVVKNVASKNIEIKKLVY 99
Query: 71 LYLMNYAKSHPDMAIMAFSTFFYQKS---------SSSFQCMIDIRSIPLFDLCSSVGVF 121
+YL+ YA+ D+A+++ STF Q++ +S+ + + IR +P+ + + +
Sbjct: 100 VYLVRYAEEQQDLALLSISTF--QRALKDPNQLIRASALRVLSSIR-VPI--IVPIMMLA 154
Query: 122 VKDCE-DSNPLIR---ALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYV 167
+K+ D +P +R A A++ + + ++ E L E + K LKD+ V
Sbjct: 155 IKEASADLSPYVRKNAAHAIQKLYSLDPEQ-KEMLIEVIEKLLKDKSTLV 203
Score = 140 (54.3 bits), Expect = 1.3e-39, Sum P(3) = 1.3e-39
Identities = 39/119 (32%), Positives = 65/119 (54%)
Query: 695 DREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLS 754
D + + + P L NAAVV++ ++ + E V ++K L V LL
Sbjct: 294 DPDHRLLIRNTKPLLQSRNAAVVMAVAQLYWHISPK--SE---VGIISKSL----VRLLR 344
Query: 755 SEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIA 813
S EVQY+ L+NI + +R +L+ +K F+V+ DP +K+ KL+I+ LA++ANI+
Sbjct: 345 SNREVQYIVLQNIATMSIQRKGMLEPYLKSFYVRSTDPTMIKILKLEILTNLANEANIS 403
Score = 124 (48.7 bits), Expect = 3.3e-20, Sum P(3) = 3.3e-20
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ F + +D N LIRA A+R + IRV I + +++ D PYVRK AA +
Sbjct: 116 SISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQ 175
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KLY ++ + + + ++ ++ LL D + +
Sbjct: 176 KLYSLDPE--QKEMLIEVIEKLLKDKSTL 202
Score = 118 (46.6 bits), Expect = 1.3e-39, Sum P(3) = 1.3e-39
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 818 VVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERI 871
VV E++VVIK + + P ++ II + + LD++ P ARAS++W+IGE ER+
Sbjct: 457 VVAESVVVIKKLLQMQPAQHGEIIKHMAKLLDSITVPVARASILWLIGENCERV 510
Score = 107 (42.7 bits), Expect = 5.2e-12, Sum P(3) = 5.2e-12
Identities = 39/161 (24%), Positives = 69/161 (42%)
Query: 408 ERIDN-ADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQDSD 466
ER+ A ++L + F +E+ V+LQ+L KL+L T+ L Q +L+L D
Sbjct: 508 ERVPKIAPDVLRKMAKSFTNEDDLVKLQILNLGAKLYLTNSKQTKLLTQYILNLGKYDQ- 566
Query: 467 NPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQ---TDNL 523
N D+RDR +L+ L + + + + + F D + + L
Sbjct: 567 NYDIRDRTRFIRQLIVPNEKSGALSKYAKKIFLAQKPAPLLESPFKDRDHFQLGTLSHTL 626
Query: 524 ELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRA 564
K + YL L N+ + PD ++ V ++ P +A
Sbjct: 627 NTKAIGYLELSNWPEVAPDPSVRNVEVIELQAKEWTPAGKA 667
Score = 79 (32.9 bits), Expect = 7.3e-26, Sum P(2) = 7.3e-26
Identities = 25/99 (25%), Positives = 51/99 (51%)
Query: 709 LAHANAAVVLSAVKVLMKLMEMLPGE-GDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNI 767
L++ + VV +V V+ KL++M P + G+ + + K L +T+ + + ++ N
Sbjct: 450 LSNRDEIVVAESVVVIKKLLQMQPAQHGEIIKHMAKLLDS--ITVPVARASILWLIGENC 507
Query: 768 NLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRL 806
+ + PD+L+ K F N+ VKL+ L++ +L
Sbjct: 508 ERVPKIAPDVLRKMAKSFT---NEDDLVKLQILNLGAKL 543
Score = 55 (24.4 bits), Expect = 1.4e-24, Sum P(3) = 1.4e-24
Identities = 18/57 (31%), Positives = 27/57 (47%)
Query: 560 PLIRALAVRTMG--CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 614
P+ RA + +G C RV KI + + K +ED V+ AKLY N++
Sbjct: 493 PVARASILWLIGENCERVPKIAPDVLRKMAKSFTNEDDLVKLQILNLGAKLYLTNSK 549
Score = 39 (18.8 bits), Expect = 4.0e-13, Sum P(3) = 4.0e-13
Identities = 19/114 (16%), Positives = 48/114 (42%)
Query: 558 SNPLIRALAVRTMGCIRVDKITEYLCEPLRKC--LKDEDPYVRKTAAVCV----AKLYDI 611
SN ++ + ++ + + + + + + EP K ++ DP + K + + A +I
Sbjct: 345 SNREVQYIVLQNIATMSIQR--KGMLEPYLKSFYVRSTDPTMIKILKLEILTNLANEANI 402
Query: 612 NAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTI 665
+ L E Q ++ + + + ++SE+ + SG+ + N I
Sbjct: 403 STLLREFQTYVKSQDKQFAAATIQTIGRCATSISEVTDTCLSGLVCLLSNRDEI 456
Score = 39 (18.8 bits), Expect = 5.2e-12, Sum P(3) = 5.2e-12
Identities = 25/105 (23%), Positives = 48/105 (45%)
Query: 280 VSTLTKKLAPPLVTLLSSEPEVQYV-ALRNINLIVQKRP----DILKHEMKVFFVKYNDP 334
+S +T LV LLS+ E+ ++ I ++Q +P +I+KH K+ D
Sbjct: 435 ISEVTDTCLSGLVCLLSNRDEIVVAESVVVIKKLLQMQPAQHGEIIKHMAKLL-----DS 489
Query: 335 IYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRA 379
I V + ++A+I ++ E E ++ D +RK ++
Sbjct: 490 ITVPV----------ARASILWLIGENCERVPKIAPDVLRKMAKS 524
>FB|FBgn0003210 [details] [associations]
symbol:rb "ruby" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0030135 "coated vesicle" evidence=TAS] [GO:0008021 "synaptic
vesicle" evidence=TAS] [GO:0016183 "synaptic vesicle coating"
evidence=TAS] [GO:0006901 "vesicle coating" evidence=TAS]
[GO:0008057 "eye pigment granule organization" evidence=NAS]
[GO:0006726 "eye pigment biosynthetic process" evidence=TAS]
[GO:0007040 "lysosome organization" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=NAS] [GO:0030123 "AP-3
adaptor complex" evidence=ISS] [GO:0046907 "intracellular
transport" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0031396 "regulation of protein
ubiquitination" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0007220 "Notch receptor processing"
evidence=IMP] [GO:0006897 "endocytosis" evidence=IMP] [GO:0060967
"negative regulation of gene silencing by RNA" evidence=IMP]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
InterPro:IPR026740 Pfam:PF01602 PIRSF:PIRSF037096 GO:GO:0008340
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008021 EMBL:AE014298 GO:GO:0007040 GO:GO:0007220
GO:GO:0046907 PANTHER:PTHR11134 GO:GO:0016183
GeneTree:ENSGT00530000063546 KO:K12397 GO:GO:0030123
PANTHER:PTHR11134:SF1 GO:GO:0060967 GO:GO:0006727 GO:GO:0031396
ChiTaRS:RB1 RefSeq:NP_001162664.1 UniGene:Dm.1682
ProteinModelPortal:E1JJE0 SMR:E1JJE0 EnsemblMetazoa:FBtr0301530
GeneID:31381 KEGG:dme:Dmel_CG11427 CTD:31381 FlyBase:FBgn0003210
OMA:LIGEYNE PhylomeDB:E1JJE0 GenomeRNAi:31381 NextBio:773356
Bgee:E1JJE0 Uniprot:E1JJE0
Length = 1178
Score = 321 (118.1 bits), Expect = 1.4e-39, Sum P(3) = 1.4e-39
Identities = 76/201 (37%), Positives = 116/201 (57%)
Query: 491 LHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNT 550
L + +I + G+D S LFP VV + + N+E+KKLVY+YL+ YA+ D+A+++++T
Sbjct: 61 LEAMKRIIGMIARGRDASDLFPAVVKNVVSKNIEVKKLVYVYLVRYAEEQQDLALLSIST 120
Query: 551 FVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYD 610
F + +D N LIRA A+R + IRV I + +R D PYVRKTAA + KLY
Sbjct: 121 FQRALKDPNQLIRASALRVLSSIRVSMIVPIVMLAIRDSAADLSPYVRKTAAHAIPKLYS 180
Query: 611 INAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLT 670
++A ++ + ++ LLSD +VV +AV A E+ V LI N + KL
Sbjct: 181 LDADQKDELVMV--IEKLLSDRTTLVVGSAVMAFDEV---CPERVDLIHKNYR---KLCN 232
Query: 671 ALNECTEWGQVFILDSLSNYS 691
L + EWGQV I++ L+ Y+
Sbjct: 233 FLLDVDEWGQVIIINMLTRYA 253
Score = 218 (81.8 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 51/153 (33%), Positives = 84/153 (54%)
Query: 287 LAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMI 346
+A L+ LL S EVQ V L I + KR I + +K FFV+ +DP ++KL KLDI+
Sbjct: 371 IAKALIRLLRSHKEVQSVVLNCIASMSTKRKAIFEPHLKSFFVRTSDPTHIKLLKLDILT 430
Query: 347 RLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKY 406
LAS +I+ +L E + Y + D FV ++AIGRCA +++ E C+S L+ L+
Sbjct: 431 NLASAGSISLILREFQTYISSSDRSFVAATIQAIGRCASSIKEVTETCLSGLVHLLSNHD 490
Query: 407 AERIDNADELLESFLEGFHDENTQVQLQLLTAI 439
+ + +++ L+ E+ ++ Q+ I
Sbjct: 491 EHVVAESVVVIKRLLQTKAAEHFEIITQMAKLI 523
Score = 137 (53.3 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 17 ELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNY 76
+LK L+S+ I + G+D S LFP VV + + N+E+KKLVY+YL+ Y
Sbjct: 47 DLKQMLDSNKDGLKLEAMKRIIGMIARGRDASDLFPAVVKNVVSKNIEVKKLVYVYLVRY 106
Query: 77 AKSHPDMAIMAFSTF 91
A+ D+A+++ STF
Sbjct: 107 AEEQQDLALLSISTF 121
Score = 131 (51.2 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ F + +D N LIRA A+R + IRV I + +R D PYVRKTAA +
Sbjct: 117 SISTFQRALKDPNQLIRASALRVLSSIRVSMIVPIVMLAIRDSAADLSPYVRKTAAHAIP 176
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSD 201
KLY ++A ++ + ++ LLSD
Sbjct: 177 KLYSLDADQKDELVMV--IEKLLSD 199
Score = 128 (50.1 bits), Expect = 1.4e-39, Sum P(3) = 1.4e-39
Identities = 30/71 (42%), Positives = 43/71 (60%)
Query: 745 LAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMI 804
+A L+ LL S EVQ V L I + KR I + +K FFV+ +DP ++KL KLDI+
Sbjct: 371 IAKALIRLLRSHKEVQSVVLNCIASMSTKRKAIFEPHLKSFFVRTSDPTHIKLLKLDILT 430
Query: 805 RLASQANIAQV 815
LAS +I+ +
Sbjct: 431 NLASAGSISLI 441
Score = 113 (44.8 bits), Expect = 5.6e-20, Sum P(3) = 5.6e-20
Identities = 32/99 (32%), Positives = 53/99 (53%)
Query: 405 KYAERIDN-ADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQ 463
+Y E++ A ++L + F DE V+LQ+L VKL+L P T L Q V +LA
Sbjct: 541 EYNEKVPLIAPDVLRKMAKSFVDEQDVVKLQVLNLGVKLYLTNPEQTSLLCQYVFTLARY 600
Query: 464 DSDNPDLRDRGFIYWRLL--STGNTFYILLHLTRLVIAS 500
D N D+RDR +++ ++G + + H ++ +AS
Sbjct: 601 DP-NYDVRDRARFLRQIIFPASGTSSVLSQHARQVFLAS 638
Score = 112 (44.5 bits), Expect = 1.4e-39, Sum P(3) = 1.4e-39
Identities = 21/55 (38%), Positives = 39/55 (70%)
Query: 817 YVVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERI 871
+VV E++VVIK + + ++ II+ + + +D ++ P ARA++IW+IGEY E++
Sbjct: 492 HVVAESVVVIKRLLQTKAAEHFEIITQMAKLIDYINVPAARAAIIWLIGEYNEKV 546
Score = 55 (24.4 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 36/159 (22%), Positives = 65/159 (40%)
Query: 498 IASMTVGKDVSALF-PDVVNCM--QTDNLELKKLVYLYLMNYAKSHP-DMAIMAVNTFVK 553
IASM+ + A+F P + + +D +K L L N A + + + T++
Sbjct: 393 IASMSTKR--KAIFEPHLKSFFVRTSDPTHIKLLKLDILTNLASAGSISLILREFQTYIS 450
Query: 554 DCEDSNPLIRALAVRTMG-CIR-VDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDI 611
+ S A ++ +G C + ++TE L L + D +V + V + +L
Sbjct: 451 SSDRS---FVAATIQAIGRCASSIKEVTETCLSGLVHLLSNHDEHVVAESVVVIKRLLQT 507
Query: 612 NAQLVEDQGFLDQLKDLLSDSN-PMVVANAVAALSEMNE 649
A E + Q+ L+ N P A + + E NE
Sbjct: 508 KA--AEHFEIITQMAKLIDYINVPAARAAIIWLIGEYNE 544
Score = 48 (22.0 bits), Expect = 6.2e-13, Sum P(4) = 6.2e-13
Identities = 18/81 (22%), Positives = 37/81 (45%)
Query: 651 STSGVALIEMNAQTINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLA 710
S+S + + Q I + +++ E TE ++ LSN+ + A+S+ + RL
Sbjct: 450 SSSDRSFVAATIQAIGRCASSIKEVTETCLSGLVHLLSNHD--EHVVAESVV--VIKRLL 505
Query: 711 HANAAVVLSAVKVLMKLMEML 731
AA + + KL++ +
Sbjct: 506 QTKAAEHFEIITQMAKLIDYI 526
Score = 46 (21.3 bits), Expect = 2.8e-31, Sum P(4) = 2.8e-31
Identities = 29/113 (25%), Positives = 45/113 (39%)
Query: 424 FHDENTQVQLQLLTAI--VKLFLKRPTDTQELVQQV-LSLATQDSDNPDLRDRGFIYWRL 480
F+D V L+LL++ +L LK P ELV+ V + + + LR L
Sbjct: 1032 FNDSTHAVDLELLSSAGSSRLQLKPPVG--ELVRSVQIGESCHREERAKLRGMNEHQCEL 1089
Query: 481 LSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYL 533
++ L + V S+ V S+ + +C L K LV L L
Sbjct: 1090 RGLRQDLIDVVALRQKVFESINVAHTHSSSSGQL-HCFAGQTLSSKSLVLLTL 1141
Score = 43 (20.2 bits), Expect = 2.0e-12, Sum P(4) = 2.0e-12
Identities = 39/177 (22%), Positives = 68/177 (38%)
Query: 622 LDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTEWGQV 681
L L LLS+ + VVA +V + + + T E+ Q + KL+ +N +
Sbjct: 479 LSGLVHLLSNHDEHVVAESVVVIKRLLQ--TKAAEHFEIITQ-MAKLIDYIN--VPAARA 533
Query: 682 FILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTL 741
I+ + Y+ K A + ++ V L + + +KL P +
Sbjct: 534 AIIWLIGEYNEKVPLIAPDVLRKMAKSFVDEQDVVKLQVLNLGVKLYLTNPEQ------- 586
Query: 742 TKKLAPPLVTLLSSEP--EVQYVA--LRNINLIVQKRPDIL-KHEMKVFFVKYNDPI 793
T L + TL +P +V+ A LR I +L +H +VF P+
Sbjct: 587 TSLLCQYVFTLARYDPNYDVRDRARFLRQIIFPASGTSSVLSQHARQVFLASKPAPV 643
Score = 40 (19.1 bits), Expect = 2.3e-19, Sum P(4) = 2.3e-19
Identities = 16/69 (23%), Positives = 32/69 (46%)
Query: 374 RKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQL 433
+ V+ I + I++ +S + S +L+ I + +R + L+SF D T ++L
Sbjct: 365 KNEVQLIAKALIRLLRSHKEVQSVVLNCIASMSTKRKAIFEPHLKSFFVRTSDP-THIKL 423
Query: 434 QLLTAIVKL 442
L + L
Sbjct: 424 LKLDILTNL 432
Score = 38 (18.4 bits), Expect = 0.00081, Sum P(3) = 0.00081
Identities = 16/72 (22%), Positives = 30/72 (41%)
Query: 134 ALAVRTMG-CIR-VDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGF 191
A ++ +G C + ++TE L L + D +V + V + +L A E
Sbjct: 458 AATIQAIGRCASSIKEVTETCLSGLVHLLSNHDEHVVAESVVVIKRLLQTKA--AEHFEI 515
Query: 192 LDQLKDLLSDSN 203
+ Q+ L+ N
Sbjct: 516 ITQMAKLIDYIN 527
>UNIPROTKB|F1PVY2 [details] [associations]
symbol:AP3B1 "AP-3 complex subunit beta-1" species:9615
"Canis lupus familiaris" [GO:0051138 "positive regulation of NK T
cell differentiation" evidence=IEA] [GO:0048490 "anterograde
synaptic vesicle transport" evidence=IEA] [GO:0048007 "antigen
processing and presentation, exogenous lipid antigen via MHC class
Ib" evidence=IEA] [GO:0032438 "melanosome organization"
evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0007596 "blood coagulation" evidence=IEA]
[GO:0006622 "protein targeting to lysosome" evidence=IEA]
[GO:0030123 "AP-3 adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0007596 PANTHER:PTHR11134
GO:GO:0032438 GeneTree:ENSGT00530000063546 OMA:KRIVGMI
GO:GO:0030123 GO:GO:0048007 GO:GO:0051138 GO:GO:0006622
PANTHER:PTHR11134:SF1 EMBL:AAEX03002125 Ensembl:ENSCAFT00000014640
Uniprot:F1PVY2
Length = 1090
Score = 303 (111.7 bits), Expect = 3.3e-39, Sum P(3) = 3.3e-39
Identities = 68/201 (33%), Positives = 114/201 (56%)
Query: 491 LHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNT 550
L + ++ + GK+ S LFP VV + + N+E+KKLVY+YL+ YA+ D+A+++++T
Sbjct: 60 LDAMKRIVGMIAKGKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSIST 119
Query: 551 FVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYD 610
F + +D N LIRA A+R + IRV I + +++ D PYVRK AA + KLY
Sbjct: 120 FQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYS 179
Query: 611 INAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLT 670
++ + + + ++ ++ LL D + +V + V A E+ + LI N + KL
Sbjct: 180 LDPE--QKEMLIEVIEKLLKDKSTLVAGSVVMAFEEV---CPDRIDLIHKNYR---KLCN 231
Query: 671 ALNECTEWGQVFILDSLSNYS 691
L + EWGQV I+ L+ Y+
Sbjct: 232 LLVDVEEWGQVVIIHMLTRYA 252
Score = 207 (77.9 bits), Expect = 3.9e-24, Sum P(3) = 3.9e-24
Identities = 50/157 (31%), Positives = 85/157 (54%)
Query: 287 LAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMI 346
++ LV LL S EVQY+ L+NI + +R + + +K F+V+ DP +K+ KL+I+
Sbjct: 335 ISKSLVRLLRSNREVQYIVLQNIATMSIQRKGMFEPYLKSFYVRSTDPTMIKILKLEILT 394
Query: 347 RLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK- 405
LA++ANI+ +L E + Y D F ++ IGRCA + + + C+S L+ L+ +
Sbjct: 395 NLANEANISTLLREFQTYVKSQDKQFAAATIQTIGRCATNISEVTDTCLSGLVCLLSNRD 454
Query: 406 ---YAERIDNADELLESFLEGFHDENTQVQLQLLTAI 439
AE + +LL+ H E + +LL +I
Sbjct: 455 EIVVAESVVVIKKLLQ-MQPAQHGEIIKHMAKLLDSI 490
Score = 155 (59.6 bits), Expect = 3.9e-24, Sum P(3) = 3.9e-24
Identities = 50/170 (29%), Positives = 89/170 (52%)
Query: 11 KKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVY 70
KK E +LK L S+ + + GK+ S LFP VV + + N+E+KKLVY
Sbjct: 42 KKNE--DLKQMLESNKDSAKLDAMKRIVGMIAKGKNASELFPAVVKNVASKNIEIKKLVY 99
Query: 71 LYLMNYAKSHPDMAIMAFSTFFYQKS---------SSSFQCMIDIRSIPLFDLCSSVGVF 121
+YL+ YA+ D+A+++ STF Q++ +S+ + + IR +P+ + + +
Sbjct: 100 VYLVRYAEEQQDLALLSISTF--QRALKDPNQLIRASALRVLSSIR-VPI--IVPIMMLA 154
Query: 122 VKDCE-DSNPLIR---ALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYV 167
+K+ D +P +R A A++ + + ++ E L E + K LKD+ V
Sbjct: 155 IKEASADLSPYVRKNAAHAIQKLYSLDPEQ-KEMLIEVIEKLLKDKSTLV 203
Score = 136 (52.9 bits), Expect = 3.3e-39, Sum P(3) = 3.3e-39
Identities = 38/119 (31%), Positives = 64/119 (53%)
Query: 695 DREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLS 754
D + + + P L NAAVV++ ++ + E V ++K L V LL
Sbjct: 294 DPDHRLLIRNTKPLLQSRNAAVVMAVAQLYWHISPK--SE---VGIISKSL----VRLLR 344
Query: 755 SEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIA 813
S EVQY+ L+NI + +R + + +K F+V+ DP +K+ KL+I+ LA++ANI+
Sbjct: 345 SNREVQYIVLQNIATMSIQRKGMFEPYLKSFYVRSTDPTMIKILKLEILTNLANEANIS 403
Score = 124 (48.7 bits), Expect = 8.7e-20, Sum P(3) = 8.7e-20
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ F + +D N LIRA A+R + IRV I + +++ D PYVRK AA +
Sbjct: 116 SISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQ 175
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KLY ++ + + + ++ ++ LL D + +
Sbjct: 176 KLYSLDPE--QKEMLIEVIEKLLKDKSTL 202
Score = 118 (46.6 bits), Expect = 3.3e-39, Sum P(3) = 3.3e-39
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 818 VVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERI 871
VV E++VVIK + + P ++ II + + LD++ P ARAS++W+IGE ER+
Sbjct: 457 VVAESVVVIKKLLQMQPAQHGEIIKHMAKLLDSITVPVARASILWLIGENCERV 510
Score = 103 (41.3 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 37/145 (25%), Positives = 64/145 (44%)
Query: 408 ERIDN-ADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQDSD 466
ER+ A ++L + F +E+ V+LQ+L KL+L T+ L Q +L+L D
Sbjct: 508 ERVPKIAPDVLRKMAKSFTNEDDLVKLQILNLGAKLYLTNSKQTKLLTQYILNLGKYDQ- 566
Query: 467 NPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQ---TDNL 523
N D+RDR +L+ L + + + + + F D + + L
Sbjct: 567 NYDIRDRTRFIRQLIVPNEKSGALSKYAKKIFLAQKPAPLLESPFKDRDHFQLGTLSHTL 626
Query: 524 ELKKLVYLYLMNYAKSHPDMAIMAV 548
K + YL L N+ + PD ++ V
Sbjct: 627 NTKAIGYLELSNWPEVAPDPSVRNV 651
Score = 79 (32.9 bits), Expect = 7.3e-26, Sum P(2) = 7.3e-26
Identities = 25/99 (25%), Positives = 51/99 (51%)
Query: 709 LAHANAAVVLSAVKVLMKLMEMLPGE-GDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNI 767
L++ + VV +V V+ KL++M P + G+ + + K L +T+ + + ++ N
Sbjct: 450 LSNRDEIVVAESVVVIKKLLQMQPAQHGEIIKHMAKLLDS--ITVPVARASILWLIGENC 507
Query: 768 NLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRL 806
+ + PD+L+ K F N+ VKL+ L++ +L
Sbjct: 508 ERVPKIAPDVLRKMAKSFT---NEDDLVKLQILNLGAKL 543
Score = 55 (24.4 bits), Expect = 3.9e-24, Sum P(3) = 3.9e-24
Identities = 18/57 (31%), Positives = 27/57 (47%)
Query: 560 PLIRALAVRTMG--CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 614
P+ RA + +G C RV KI + + K +ED V+ AKLY N++
Sbjct: 493 PVARASILWLIGENCERVPKIAPDVLRKMAKSFTNEDDLVKLQILNLGAKLYLTNSK 549
Score = 39 (18.8 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 25/105 (23%), Positives = 48/105 (45%)
Query: 280 VSTLTKKLAPPLVTLLSSEPEVQYV-ALRNINLIVQKRP----DILKHEMKVFFVKYNDP 334
+S +T LV LLS+ E+ ++ I ++Q +P +I+KH K+ D
Sbjct: 435 ISEVTDTCLSGLVCLLSNRDEIVVAESVVVIKKLLQMQPAQHGEIIKHMAKLL-----DS 489
Query: 335 IYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRA 379
I V + ++A+I ++ E E ++ D +RK ++
Sbjct: 490 ITVPV----------ARASILWLIGENCERVPKIAPDVLRKMAKS 524
>UNIPROTKB|E5RJ68 [details] [associations]
symbol:AP3B1 "AP-3 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0006622 "protein targeting to lysosome" evidence=IEA]
[GO:0007596 "blood coagulation" evidence=IEA] [GO:0008089
"anterograde axon cargo transport" evidence=IEA] [GO:0048007
"antigen processing and presentation, exogenous lipid antigen via
MHC class Ib" evidence=IEA] [GO:0048490 "anterograde synaptic
vesicle transport" evidence=IEA] [GO:0051138 "positive regulation
of NK T cell differentiation" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0007596 PANTHER:PTHR11134
GO:GO:0030123 GO:GO:0048007 GO:GO:0051138 GO:GO:0006622
PANTHER:PTHR11134:SF1 EMBL:AC024568 EMBL:AC024578 EMBL:AC104108
EMBL:AC112197 GeneID:8546 HGNC:HGNC:566 ChiTaRS:AP3B1
IPI:IPI00982231 RefSeq:NP_001258698.1 ProteinModelPortal:E5RJ68
SMR:E5RJ68 PRIDE:E5RJ68 Ensembl:ENST00000519295 ArrayExpress:E5RJ68
Bgee:E5RJ68 Uniprot:E5RJ68
Length = 1045
Score = 303 (111.7 bits), Expect = 5.6e-39, Sum P(3) = 5.6e-39
Identities = 68/201 (33%), Positives = 114/201 (56%)
Query: 491 LHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNT 550
L + ++ + GK+ S LFP VV + + N+E+KKLVY+YL+ YA+ D+A+++++T
Sbjct: 11 LDAMKRIVGMIAKGKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSIST 70
Query: 551 FVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYD 610
F + +D N LIRA A+R + IRV I + +++ D PYVRK AA + KLY
Sbjct: 71 FQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYS 130
Query: 611 INAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLT 670
++ + + + ++ ++ LL D + +V + V A E+ + LI N + KL
Sbjct: 131 LDPE--QKEMLIEVIEKLLKDKSTLVAGSVVMAFEEV---CPDRIDLIHKNYR---KLCN 182
Query: 671 ALNECTEWGQVFILDSLSNYS 691
L + EWGQV I+ L+ Y+
Sbjct: 183 LLVDVEEWGQVVIIHMLTRYA 203
Score = 198 (74.8 bits), Expect = 5.3e-22, Sum P(3) = 5.3e-22
Identities = 49/157 (31%), Positives = 84/157 (53%)
Query: 287 LAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMI 346
++ LV LL S EVQY+ L+NI + +R + + +K F+V+ DP +K KL+I+
Sbjct: 286 ISKSLVRLLRSNREVQYIVLQNIATMSIQRKGMFEPYLKSFYVRSTDPTMIKTLKLEILT 345
Query: 347 RLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK- 405
LA++ANI+ +L E + Y D F ++ IGRCA + + + C++ L+ L+ +
Sbjct: 346 NLANEANISTLLREFQTYVKSQDKQFAAATIQTIGRCATNILEVTDTCLNGLVCLLSNRD 405
Query: 406 ---YAERIDNADELLESFLEGFHDENTQVQLQLLTAI 439
AE + +LL+ H E + +LL +I
Sbjct: 406 EIVVAESVVVIKKLLQ-MQPAQHGEIIKHMAKLLDSI 441
Score = 144 (55.7 bits), Expect = 5.3e-22, Sum P(3) = 5.3e-22
Identities = 43/143 (30%), Positives = 80/143 (55%)
Query: 38 IASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQKS- 96
+ + GK+ S LFP VV + + N+E+KKLVY+YL+ YA+ D+A+++ STF Q++
Sbjct: 18 VGMIAKGKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTF--QRAL 75
Query: 97 --------SSSFQCMIDIRSIPLFDLCSSVGVFVKDCE-DSNPLIR---ALAVRTMGCIR 144
+S+ + + IR +P+ + + + +K+ D +P +R A A++ + +
Sbjct: 76 KDPNQLIRASALRVLSSIR-VPI--IVPIMMLAIKEASADLSPYVRKNAAHAIQKLYSLD 132
Query: 145 VDKITEYLCEPLRKCLKDEDPYV 167
++ E L E + K LKD+ V
Sbjct: 133 PEQ-KEMLIEVIEKLLKDKSTLV 154
Score = 133 (51.9 bits), Expect = 5.6e-39, Sum P(3) = 5.6e-39
Identities = 37/119 (31%), Positives = 61/119 (51%)
Query: 695 DREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLS 754
D + + + P L NAAVV++ ++ + E +S LV LL
Sbjct: 245 DPDHRLLIRNTKPLLQSRNAAVVMAVAQLYWHISPK--SEAGIISK-------SLVRLLR 295
Query: 755 SEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIA 813
S EVQY+ L+NI + +R + + +K F+V+ DP +K KL+I+ LA++ANI+
Sbjct: 296 SNREVQYIVLQNIATMSIQRKGMFEPYLKSFYVRSTDPTMIKTLKLEILTNLANEANIS 354
Score = 124 (48.7 bits), Expect = 1.6e-19, Sum P(3) = 1.6e-19
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ F + +D N LIRA A+R + IRV I + +++ D PYVRK AA +
Sbjct: 67 SISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQ 126
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KLY ++ + + + ++ ++ LL D + +
Sbjct: 127 KLYSLDPE--QKEMLIEVIEKLLKDKSTL 153
Score = 118 (46.6 bits), Expect = 5.6e-39, Sum P(3) = 5.6e-39
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 818 VVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERI 871
VV E++VVIK + + P ++ II + + LD++ P ARAS++W+IGE ER+
Sbjct: 408 VVAESVVVIKKLLQMQPAQHGEIIKHMAKLLDSITVPVARASILWLIGENCERV 461
Score = 99 (39.9 bits), Expect = 7.3e-11, Sum P(2) = 7.3e-11
Identities = 37/145 (25%), Positives = 63/145 (43%)
Query: 408 ERIDN-ADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQDSD 466
ER+ A ++L + F E+ V+LQ+L KL+L T+ L Q +L+L D
Sbjct: 459 ERVPKIAPDVLRKMAKSFTSEDDLVKLQILNLGAKLYLTNSKQTKLLTQYILNLGKYDQ- 517
Query: 467 NPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQ---TDNL 523
N D+RDR +L+ L + + + + + F D + + L
Sbjct: 518 NYDIRDRTRFIRQLIVPNVKSGALSKYAKKIFLAQKPAPLLESPFKDRDHFQLGTLSHTL 577
Query: 524 ELKKLVYLYLMNYAKSHPDMAIMAV 548
+K YL L N+ + PD ++ V
Sbjct: 578 NIKATGYLELSNWPEVAPDPSVRNV 602
Score = 54 (24.1 bits), Expect = 5.3e-22, Sum P(3) = 5.3e-22
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 560 PLIRALAVRTMG--CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 614
P+ RA + +G C RV KI + + K ED V+ AKLY N++
Sbjct: 444 PVARASILWLIGENCERVPKIAPDVLRKMAKSFTSEDDLVKLQILNLGAKLYLTNSK 500
Score = 38 (18.4 bits), Expect = 6.4e-12, Sum P(3) = 6.4e-12
Identities = 24/126 (19%), Positives = 55/126 (43%)
Query: 526 KKLVYLYLMNYAKSHPDMAIMAVNTFVKD--CEDSNP-LIRALAVRTMGCIRVDKITEYL 582
+++ Y+ L N A M ++K ++P +I+ L + + + + L
Sbjct: 298 REVQYIVLQNIATMSIQRKGM-FEPYLKSFYVRSTDPTMIKTLKLEILTNLANEANISTL 356
Query: 583 CEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVE-DQGFLDQLKDLLSDSNPMVVANAV 641
+ +K +D ++ AA + + ++E L+ L LLS+ + +VVA +V
Sbjct: 357 LREFQTYVKSQD---KQFAAATIQTIGRCATNILEVTDTCLNGLVCLLSNRDEIVVAESV 413
Query: 642 AALSEM 647
+ ++
Sbjct: 414 VVIKKL 419
>UNIPROTKB|O00203 [details] [associations]
symbol:AP3B1 "AP-3 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0006622 "protein
targeting to lysosome" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0048007 "antigen processing and
presentation, exogenous lipid antigen via MHC class Ib"
evidence=IEA] [GO:0051138 "positive regulation of NK T cell
differentiation" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0030665 "clathrin-coated vesicle membrane"
evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IPI] [GO:0032438 "melanosome organization" evidence=IMP]
[GO:0006886 "intracellular protein transport" evidence=TAS]
[GO:0008089 "anterograde axon cargo transport" evidence=ISS]
[GO:0048490 "anterograde synaptic vesicle transport" evidence=ISS]
Reactome:REACT_11123 InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR026739 InterPro:IPR026740 Pfam:PF01602
PIRSF:PIRSF037096 GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0007596 GO:GO:0006897
GO:GO:0008089 eggNOG:COG5096 GO:GO:0030665 PANTHER:PTHR11134
GO:GO:0032438 CTD:8546 HOGENOM:HOG000033978 HOVERGEN:HBG050519
KO:K12397 OMA:KRIVGMI OrthoDB:EOG4H729X GO:GO:0030123 GO:GO:0048490
GO:GO:0048007 GO:GO:0051138 GO:GO:0006622 PANTHER:PTHR11134:SF1
EMBL:U91931 EMBL:U81504 EMBL:BX538041 EMBL:AC024568 EMBL:AC024578
EMBL:AC104108 EMBL:AC112197 EMBL:BC038444 EMBL:AF247736
IPI:IPI00021129 IPI:IPI00397887 PIR:T50651 PIR:T50652
RefSeq:NP_003655.3 UniGene:Hs.532091 ProteinModelPortal:O00203
SMR:O00203 DIP:DIP-24208N IntAct:O00203 STRING:O00203
PhosphoSite:O00203 PaxDb:O00203 PRIDE:O00203 DNASU:8546
Ensembl:ENST00000255194 GeneID:8546 KEGG:hsa:8546 UCSC:uc003kfj.3
GeneCards:GC05M077296 HGNC:HGNC:566 HPA:HPA038737 MIM:203300
MIM:603401 MIM:608233 neXtProt:NX_O00203 Orphanet:183678
PharmGKB:PA24857 InParanoid:O00203 PhylomeDB:O00203 ChiTaRS:AP3B1
GenomeRNAi:8546 NextBio:32018 ArrayExpress:O00203 Bgee:O00203
CleanEx:HS_AP3B1 Genevestigator:O00203 GermOnline:ENSG00000132842
Uniprot:O00203
Length = 1094
Score = 303 (111.7 bits), Expect = 6.9e-39, Sum P(3) = 6.9e-39
Identities = 68/201 (33%), Positives = 114/201 (56%)
Query: 491 LHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNT 550
L + ++ + GK+ S LFP VV + + N+E+KKLVY+YL+ YA+ D+A+++++T
Sbjct: 60 LDAMKRIVGMIAKGKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSIST 119
Query: 551 FVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYD 610
F + +D N LIRA A+R + IRV I + +++ D PYVRK AA + KLY
Sbjct: 120 FQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYS 179
Query: 611 INAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLT 670
++ + + + ++ ++ LL D + +V + V A E+ + LI N + KL
Sbjct: 180 LDPE--QKEMLIEVIEKLLKDKSTLVAGSVVMAFEEV---CPDRIDLIHKNYR---KLCN 231
Query: 671 ALNECTEWGQVFILDSLSNYS 691
L + EWGQV I+ L+ Y+
Sbjct: 232 LLVDVEEWGQVVIIHMLTRYA 252
Score = 198 (74.8 bits), Expect = 4.7e-23, Sum P(3) = 4.7e-23
Identities = 49/157 (31%), Positives = 84/157 (53%)
Query: 287 LAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMI 346
++ LV LL S EVQY+ L+NI + +R + + +K F+V+ DP +K KL+I+
Sbjct: 335 ISKSLVRLLRSNREVQYIVLQNIATMSIQRKGMFEPYLKSFYVRSTDPTMIKTLKLEILT 394
Query: 347 RLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK- 405
LA++ANI+ +L E + Y D F ++ IGRCA + + + C++ L+ L+ +
Sbjct: 395 NLANEANISTLLREFQTYVKSQDKQFAAATIQTIGRCATNILEVTDTCLNGLVCLLSNRD 454
Query: 406 ---YAERIDNADELLESFLEGFHDENTQVQLQLLTAI 439
AE + +LL+ H E + +LL +I
Sbjct: 455 EIVVAESVVVIKKLLQ-MQPAQHGEIIKHMAKLLDSI 490
Score = 155 (59.6 bits), Expect = 4.7e-23, Sum P(3) = 4.7e-23
Identities = 50/170 (29%), Positives = 89/170 (52%)
Query: 11 KKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVY 70
KK E +LK L S+ + + GK+ S LFP VV + + N+E+KKLVY
Sbjct: 42 KKNE--DLKQMLESNKDSAKLDAMKRIVGMIAKGKNASELFPAVVKNVASKNIEIKKLVY 99
Query: 71 LYLMNYAKSHPDMAIMAFSTFFYQKS---------SSSFQCMIDIRSIPLFDLCSSVGVF 121
+YL+ YA+ D+A+++ STF Q++ +S+ + + IR +P+ + + +
Sbjct: 100 VYLVRYAEEQQDLALLSISTF--QRALKDPNQLIRASALRVLSSIR-VPI--IVPIMMLA 154
Query: 122 VKDCE-DSNPLIR---ALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYV 167
+K+ D +P +R A A++ + + ++ E L E + K LKD+ V
Sbjct: 155 IKEASADLSPYVRKNAAHAIQKLYSLDPEQ-KEMLIEVIEKLLKDKSTLV 203
Score = 133 (51.9 bits), Expect = 6.9e-39, Sum P(3) = 6.9e-39
Identities = 37/119 (31%), Positives = 61/119 (51%)
Query: 695 DREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLS 754
D + + + P L NAAVV++ ++ + E +S LV LL
Sbjct: 294 DPDHRLLIRNTKPLLQSRNAAVVMAVAQLYWHISPK--SEAGIISK-------SLVRLLR 344
Query: 755 SEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIA 813
S EVQY+ L+NI + +R + + +K F+V+ DP +K KL+I+ LA++ANI+
Sbjct: 345 SNREVQYIVLQNIATMSIQRKGMFEPYLKSFYVRSTDPTMIKTLKLEILTNLANEANIS 403
Score = 124 (48.7 bits), Expect = 1.9e-19, Sum P(3) = 1.9e-19
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ F + +D N LIRA A+R + IRV I + +++ D PYVRK AA +
Sbjct: 116 SISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQ 175
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KLY ++ + + + ++ ++ LL D + +
Sbjct: 176 KLYSLDPE--QKEMLIEVIEKLLKDKSTL 202
Score = 118 (46.6 bits), Expect = 6.9e-39, Sum P(3) = 6.9e-39
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 818 VVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERI 871
VV E++VVIK + + P ++ II + + LD++ P ARAS++W+IGE ER+
Sbjct: 457 VVAESVVVIKKLLQMQPAQHGEIIKHMAKLLDSITVPVARASILWLIGENCERV 510
Score = 99 (39.9 bits), Expect = 5.5e-12, Sum P(2) = 5.5e-12
Identities = 37/145 (25%), Positives = 63/145 (43%)
Query: 408 ERIDN-ADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQDSD 466
ER+ A ++L + F E+ V+LQ+L KL+L T+ L Q +L+L D
Sbjct: 508 ERVPKIAPDVLRKMAKSFTSEDDLVKLQILNLGAKLYLTNSKQTKLLTQYILNLGKYDQ- 566
Query: 467 NPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQ---TDNL 523
N D+RDR +L+ L + + + + + F D + + L
Sbjct: 567 NYDIRDRTRFIRQLIVPNVKSGALSKYAKKIFLAQKPAPLLESPFKDRDHFQLGTLSHTL 626
Query: 524 ELKKLVYLYLMNYAKSHPDMAIMAV 548
+K YL L N+ + PD ++ V
Sbjct: 627 NIKATGYLELSNWPEVAPDPSVRNV 651
Score = 54 (24.1 bits), Expect = 4.7e-23, Sum P(3) = 4.7e-23
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 560 PLIRALAVRTMG--CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 614
P+ RA + +G C RV KI + + K ED V+ AKLY N++
Sbjct: 493 PVARASILWLIGENCERVPKIAPDVLRKMAKSFTSEDDLVKLQILNLGAKLYLTNSK 549
Score = 38 (18.4 bits), Expect = 5.1e-13, Sum P(3) = 5.1e-13
Identities = 24/126 (19%), Positives = 55/126 (43%)
Query: 526 KKLVYLYLMNYAKSHPDMAIMAVNTFVKD--CEDSNP-LIRALAVRTMGCIRVDKITEYL 582
+++ Y+ L N A M ++K ++P +I+ L + + + + L
Sbjct: 347 REVQYIVLQNIATMSIQRKGM-FEPYLKSFYVRSTDPTMIKTLKLEILTNLANEANISTL 405
Query: 583 CEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVE-DQGFLDQLKDLLSDSNPMVVANAV 641
+ +K +D ++ AA + + ++E L+ L LLS+ + +VVA +V
Sbjct: 406 LREFQTYVKSQD---KQFAAATIQTIGRCATNILEVTDTCLNGLVCLLSNRDEIVVAESV 462
Query: 642 AALSEM 647
+ ++
Sbjct: 463 VVIKKL 468
>RGD|1310256 [details] [associations]
symbol:Ap3b1 "adaptor-related protein complex 3, beta 1 subunit"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0006622 "protein targeting to lysosome" evidence=ISO]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0007596 "blood coagulation" evidence=ISO] [GO:0008089
"anterograde axon cargo transport" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0019882 "antigen processing and
presentation" evidence=ISO] [GO:0019903 "protein phosphatase
binding" evidence=ISO] [GO:0030123 "AP-3 adaptor complex"
evidence=IEA] [GO:0032438 "melanosome organization" evidence=ISO]
[GO:0048007 "antigen processing and presentation, exogenous lipid
antigen via MHC class Ib" evidence=ISO] [GO:0048490 "anterograde
synaptic vesicle transport" evidence=ISO] [GO:0051138 "positive
regulation of NK T cell differentiation" evidence=ISO]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
InterPro:IPR026740 Pfam:PF01602 PIRSF:PIRSF037096 RGD:1310256
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0007596 PANTHER:PTHR11134 GO:GO:0032438 OMA:KRIVGMI
OrthoDB:EOG4H729X GO:GO:0030123 GO:GO:0048007 GO:GO:0051138
GO:GO:0006622 PANTHER:PTHR11134:SF1 EMBL:CH473955 IPI:IPI00360117
UniGene:Rn.11685 Ensembl:ENSRNOT00000014278 UCSC:RGD:1310256
Uniprot:D4AA25
Length = 1096
Score = 303 (111.7 bits), Expect = 8.9e-39, Sum P(3) = 8.9e-39
Identities = 68/201 (33%), Positives = 114/201 (56%)
Query: 491 LHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNT 550
L + ++ + GK+ S LFP VV + + N+E+KKLVY+YL+ YA+ D+A+++++T
Sbjct: 60 LDAMKRIVGMIAKGKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSIST 119
Query: 551 FVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYD 610
F + +D N LIRA A+R + IRV I + +++ D PYVRK AA + KLY
Sbjct: 120 FQRALKDPNQLIRASALRVLSSIRVPIIVPVMMLAIKEASADLSPYVRKNAAHAIQKLYS 179
Query: 611 INAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLT 670
++ + + + ++ ++ LL D + +V + V A E+ + LI N + KL
Sbjct: 180 LDPE--QKEMLIEVIEKLLKDKSTLVAGSVVMAFEEV---CPDRIDLIHRNYR---KLCN 231
Query: 671 ALNECTEWGQVFILDSLSNYS 691
L + EWGQV I+ L+ Y+
Sbjct: 232 LLVDVEEWGQVVIIHMLTRYA 252
Score = 200 (75.5 bits), Expect = 2.9e-23, Sum P(3) = 2.9e-23
Identities = 49/157 (31%), Positives = 84/157 (53%)
Query: 287 LAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMI 346
++ LV LL S EVQY+ L+NI + +R + + +K F+V+ DP +K KL+I+
Sbjct: 333 ISKSLVRLLRSHREVQYIVLQNIATMSIQRKGMFEPYLKSFYVRSTDPTMIKTLKLEILT 392
Query: 347 RLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK- 405
LA++ANI+ +L E + Y D F ++ IGRCA + + + C++ L+ L+ +
Sbjct: 393 NLANEANISTLLREFQTYVRSQDKQFAAATIQTIGRCATSIAEVTDTCLNGLVCLLSNRD 452
Query: 406 ---YAERIDNADELLESFLEGFHDENTQVQLQLLTAI 439
AE + +LL+ H E + +LL +I
Sbjct: 453 EIVVAESVVVIKKLLQ-MQPAQHGEIIKHMAKLLDSI 488
Score = 155 (59.6 bits), Expect = 2.9e-23, Sum P(3) = 2.9e-23
Identities = 50/170 (29%), Positives = 89/170 (52%)
Query: 11 KKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVY 70
KK E +LK L S+ + + GK+ S LFP VV + + N+E+KKLVY
Sbjct: 42 KKNE--DLKQMLESNKDSAKLDAMKRIVGMIAKGKNASELFPAVVKNVASKNIEIKKLVY 99
Query: 71 LYLMNYAKSHPDMAIMAFSTFFYQKS---------SSSFQCMIDIRSIPLFDLCSSVGVF 121
+YL+ YA+ D+A+++ STF Q++ +S+ + + IR +P+ + + +
Sbjct: 100 VYLVRYAEEQQDLALLSISTF--QRALKDPNQLIRASALRVLSSIR-VPI--IVPVMMLA 154
Query: 122 VKDCE-DSNPLIR---ALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYV 167
+K+ D +P +R A A++ + + ++ E L E + K LKD+ V
Sbjct: 155 IKEASADLSPYVRKNAAHAIQKLYSLDPEQ-KEMLIEVIEKLLKDKSTLV 203
Score = 132 (51.5 bits), Expect = 8.9e-39, Sum P(3) = 8.9e-39
Identities = 37/119 (31%), Positives = 61/119 (51%)
Query: 695 DREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLS 754
D + + + P L NAAVV++ ++ + E +S LV LL
Sbjct: 292 DPDHRLLIRNTKPLLQSRNAAVVMAVAQLYWHISPR--SEAGVISK-------SLVRLLR 342
Query: 755 SEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIA 813
S EVQY+ L+NI + +R + + +K F+V+ DP +K KL+I+ LA++ANI+
Sbjct: 343 SHREVQYIVLQNIATMSIQRKGMFEPYLKSFYVRSTDPTMIKTLKLEILTNLANEANIS 401
Score = 124 (48.7 bits), Expect = 2.4e-19, Sum P(3) = 2.4e-19
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ F + +D N LIRA A+R + IRV I + +++ D PYVRK AA +
Sbjct: 116 SISTFQRALKDPNQLIRASALRVLSSIRVPIIVPVMMLAIKEASADLSPYVRKNAAHAIQ 175
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KLY ++ + + + ++ ++ LL D + +
Sbjct: 176 KLYSLDPE--QKEMLIEVIEKLLKDKSTL 202
Score = 118 (46.6 bits), Expect = 8.9e-39, Sum P(3) = 8.9e-39
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 818 VVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERI 871
VV E++VVIK + + P ++ II + + LD++ P ARAS++W+IGE ER+
Sbjct: 455 VVAESVVVIKKLLQMQPAQHGEIIKHMAKLLDSITVPVARASILWLIGENCERV 508
Score = 106 (42.4 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 39/158 (24%), Positives = 69/158 (43%)
Query: 408 ERIDN-ADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQDSD 466
ER+ A ++L + F E+ V+LQ+L KL+L T+ L Q +L+L D
Sbjct: 506 ERVPKIAPDVLRKMAKSFTSEDDLVKLQILNLGAKLYLTNSKQTKLLTQYILNLGKYDQ- 564
Query: 467 NPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQ---TDNL 523
N D+RDR +L+ L + + + + + F D + + L
Sbjct: 565 NYDIRDRTRFIRQLIVPNEKSGALSKYAKKIFLAQKPAPLLESPFKDRDHFQLGTLSHTL 624
Query: 524 ELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPL 561
+K YL L N+ + PD ++ V ++ ++ PL
Sbjct: 625 NVKASGYLELSNWPEVAPDPSVRNVEV-IESAKEWTPL 661
Score = 77 (32.2 bits), Expect = 1.2e-25, Sum P(2) = 1.2e-25
Identities = 25/99 (25%), Positives = 52/99 (52%)
Query: 709 LAHANAAVVLSAVKVLMKLMEMLPGE-GDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNI 767
L++ + VV +V V+ KL++M P + G+ + + K L +T+ + + ++ N
Sbjct: 448 LSNRDEIVVAESVVVIKKLLQMQPAQHGEIIKHMAKLLDS--ITVPVARASILWLIGENC 505
Query: 768 NLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRL 806
+ + PD+L+ +M F +D VKL+ L++ +L
Sbjct: 506 ERVPKIAPDVLR-KMAKSFTSEDD--LVKLQILNLGAKL 541
Score = 54 (24.1 bits), Expect = 2.9e-23, Sum P(3) = 2.9e-23
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 560 PLIRALAVRTMG--CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 614
P+ RA + +G C RV KI + + K ED V+ AKLY N++
Sbjct: 491 PVARASILWLIGENCERVPKIAPDVLRKMAKSFTSEDDLVKLQILNLGAKLYLTNSK 547
Score = 37 (18.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 622 LDQLKDLLSDSNPMVVANAVAALSEM 647
L+ L LLS+ + +VVA +V + ++
Sbjct: 441 LNGLVCLLSNRDEIVVAESVVVIKKL 466
>MGI|MGI:1333879 [details] [associations]
symbol:Ap3b1 "adaptor-related protein complex 3, beta 1
subunit" species:10090 "Mus musculus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=TAS]
[GO:0006622 "protein targeting to lysosome" evidence=IMP]
[GO:0006810 "transport" evidence=IEA] [GO:0006829 "zinc ion
transport" evidence=TAS] [GO:0006886 "intracellular protein
transport" evidence=TAS] [GO:0006897 "endocytosis" evidence=IEA]
[GO:0007596 "blood coagulation" evidence=IMP] [GO:0008089
"anterograde axon cargo transport" evidence=IMP] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0019882 "antigen processing and presentation"
evidence=IMP] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030123
"AP-3 adaptor complex" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0032438 "melanosome organization"
evidence=ISO] [GO:0048007 "antigen processing and presentation,
exogenous lipid antigen via MHC class Ib" evidence=IMP] [GO:0048490
"anterograde synaptic vesicle transport" evidence=IMP] [GO:0051138
"positive regulation of NK T cell differentiation" evidence=IMP]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
InterPro:IPR026740 Pfam:PF01602 PIRSF:PIRSF037096 MGI:MGI:1333879
GO:GO:0005794 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0007596 GO:GO:0006897 GO:GO:0008089 GO:GO:0005802
eggNOG:COG5096 GO:GO:0030665 PANTHER:PTHR11134 GO:GO:0032438
CTD:8546 GeneTree:ENSGT00530000063546 HOGENOM:HOG000033978
HOVERGEN:HBG050519 KO:K12397 OMA:KRIVGMI OrthoDB:EOG4H729X
GO:GO:0030123 GO:GO:0048490 GO:GO:0048007 GO:GO:0051138
GO:GO:0006622 PANTHER:PTHR11134:SF1 EMBL:AF103809 EMBL:AF255589
EMBL:AF255566 EMBL:AF255567 EMBL:AF255568 EMBL:AF255569
EMBL:AF255570 EMBL:AF255571 EMBL:AF255572 EMBL:AF255573
EMBL:AF255574 EMBL:AF255575 EMBL:AF255576 EMBL:AF255577
EMBL:AF255578 EMBL:AF255579 EMBL:AF255580 EMBL:AF255581
EMBL:AF255582 EMBL:AF255583 EMBL:AF255584 EMBL:AF255585
EMBL:AF255586 EMBL:AF255587 EMBL:AF255588 EMBL:AC122373
EMBL:AC123043 EMBL:BC015068 IPI:IPI00130444 PIR:T18295
RefSeq:NP_033810.2 UniGene:Mm.21185 ProteinModelPortal:Q9Z1T1
SMR:Q9Z1T1 DIP:DIP-49018N IntAct:Q9Z1T1 STRING:Q9Z1T1
PhosphoSite:Q9Z1T1 PaxDb:Q9Z1T1 PRIDE:Q9Z1T1
Ensembl:ENSMUST00000022196 GeneID:11774 KEGG:mmu:11774
UCSC:uc007rlv.2 InParanoid:Q9Z1T1 NextBio:279563 Bgee:Q9Z1T1
CleanEx:MM_AP3B1 Genevestigator:Q9Z1T1
GermOnline:ENSMUSG00000021686 GO:GO:0006829 Uniprot:Q9Z1T1
Length = 1105
Score = 303 (111.7 bits), Expect = 1.2e-38, Sum P(3) = 1.2e-38
Identities = 68/201 (33%), Positives = 114/201 (56%)
Query: 491 LHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNT 550
L + ++ + GK+ S LFP VV + + N+E+KKLVY+YL+ YA+ D+A+++++T
Sbjct: 60 LDAMKRIVGMIAKGKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSIST 119
Query: 551 FVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYD 610
F + +D N LIRA A+R + IRV I + +++ D PYVRK AA + KLY
Sbjct: 120 FQRALKDPNQLIRASALRVLSSIRVPIIVPVMMLAIKEASADLSPYVRKNAAHAIQKLYS 179
Query: 611 INAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLT 670
++ + + + ++ ++ LL D + +V + V A E+ + LI N + KL
Sbjct: 180 LDPE--QKEMLIEVIEKLLKDKSTLVAGSVVMAFEEV---CPDRIDLIHRNYR---KLCN 231
Query: 671 ALNECTEWGQVFILDSLSNYS 691
L + EWGQV I+ L+ Y+
Sbjct: 232 LLVDVEEWGQVVIIHMLTRYA 252
Score = 201 (75.8 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 49/157 (31%), Positives = 84/157 (53%)
Query: 287 LAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMI 346
++ LV LL S EVQY+ L+NI + +R + + +K F+V+ DP +K KL+I+
Sbjct: 336 ISKSLVRLLRSNREVQYIVLQNIATMSIERKGMFEPYLKSFYVRSTDPTMIKTLKLEILT 395
Query: 347 RLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK- 405
LA++ANI+ +L E + Y D F ++ IGRCA + + + C++ L+ L+ +
Sbjct: 396 NLANEANISTLLREFQTYVRSQDKQFAAATIQTIGRCATSISEVTDTCLNGLVCLLSNRD 455
Query: 406 ---YAERIDNADELLESFLEGFHDENTQVQLQLLTAI 439
AE + +LL+ H E + +LL +I
Sbjct: 456 EIVVAESVVVIKKLLQ-MQPAQHGEIIRHMAKLLDSI 491
Score = 155 (59.6 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 50/170 (29%), Positives = 89/170 (52%)
Query: 11 KKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVY 70
KK E +LK L S+ + + GK+ S LFP VV + + N+E+KKLVY
Sbjct: 42 KKNE--DLKQMLESNKDSAKLDAMKRIVGMIAKGKNASELFPAVVKNVASKNIEIKKLVY 99
Query: 71 LYLMNYAKSHPDMAIMAFSTFFYQKS---------SSSFQCMIDIRSIPLFDLCSSVGVF 121
+YL+ YA+ D+A+++ STF Q++ +S+ + + IR +P+ + + +
Sbjct: 100 VYLVRYAEEQQDLALLSISTF--QRALKDPNQLIRASALRVLSSIR-VPI--IVPVMMLA 154
Query: 122 VKDCE-DSNPLIR---ALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYV 167
+K+ D +P +R A A++ + + ++ E L E + K LKD+ V
Sbjct: 155 IKEASADLSPYVRKNAAHAIQKLYSLDPEQ-KEMLIEVIEKLLKDKSTLV 203
Score = 132 (51.5 bits), Expect = 1.2e-38, Sum P(3) = 1.2e-38
Identities = 37/119 (31%), Positives = 61/119 (51%)
Query: 695 DREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLS 754
D + + + P L NAAVV++ ++ + E +S LV LL
Sbjct: 295 DPDHRLLIRNTKPLLQSRNAAVVMAVAQLYWHISPK--SEAGVISK-------SLVRLLR 345
Query: 755 SEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIA 813
S EVQY+ L+NI + +R + + +K F+V+ DP +K KL+I+ LA++ANI+
Sbjct: 346 SNREVQYIVLQNIATMSIERKGMFEPYLKSFYVRSTDPTMIKTLKLEILTNLANEANIS 404
Score = 124 (48.7 bits), Expect = 3.1e-19, Sum P(3) = 3.1e-19
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ F + +D N LIRA A+R + IRV I + +++ D PYVRK AA +
Sbjct: 116 SISTFQRALKDPNQLIRASALRVLSSIRVPIIVPVMMLAIKEASADLSPYVRKNAAHAIQ 175
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KLY ++ + + + ++ ++ LL D + +
Sbjct: 176 KLYSLDPE--QKEMLIEVIEKLLKDKSTL 202
Score = 117 (46.2 bits), Expect = 1.2e-38, Sum P(3) = 1.2e-38
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 818 VVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERI 871
VV E++VVIK + + P ++ II + + LD++ P ARAS++W+IGE ER+
Sbjct: 458 VVAESVVVIKKLLQMQPAQHGEIIRHMAKLLDSITVPVARASILWLIGENCERV 511
Score = 107 (42.7 bits), Expect = 6.9e-12, Sum P(3) = 6.9e-12
Identities = 39/158 (24%), Positives = 68/158 (43%)
Query: 408 ERIDN-ADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQDSD 466
ER+ A ++L + F E+ V+LQ+L KL+L T+ L Q +L+L D
Sbjct: 509 ERVPKIAPDVLRKMAKSFTSEDDLVKLQILNLAAKLYLTNSKQTKLLTQYILNLGKYDQ- 567
Query: 467 NPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQ---TDNL 523
N D+RDR +L+ L + + + + + F D + L
Sbjct: 568 NYDIRDRTRFIRQLIVPNEKSGALSKYAKKIFLAPKPAPLLESPFKDRDRFQLGTLSHTL 627
Query: 524 ELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPL 561
+K YL L N+ + PD ++ V ++ ++ PL
Sbjct: 628 NIKASGYLELSNWPEVAPDPSVRNVEV-IESAKEWTPL 664
Score = 78 (32.5 bits), Expect = 9.7e-26, Sum P(2) = 9.7e-26
Identities = 25/99 (25%), Positives = 52/99 (52%)
Query: 709 LAHANAAVVLSAVKVLMKLMEMLPGE-GDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNI 767
L++ + VV +V V+ KL++M P + G+ + + K L +T+ + + ++ N
Sbjct: 451 LSNRDEIVVAESVVVIKKLLQMQPAQHGEIIRHMAKLLDS--ITVPVARASILWLIGENC 508
Query: 768 NLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRL 806
+ + PD+L+ +M F +D VKL+ L++ +L
Sbjct: 509 ERVPKIAPDVLR-KMAKSFTSEDD--LVKLQILNLAAKL 544
Score = 57 (25.1 bits), Expect = 1.1e-23, Sum P(3) = 1.1e-23
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 560 PLIRALAVRTMG--CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 614
P+ RA + +G C RV KI + + K ED V+ AKLY N++
Sbjct: 494 PVARASILWLIGENCERVPKIAPDVLRKMAKSFTSEDDLVKLQILNLAAKLYLTNSK 550
Score = 38 (18.4 bits), Expect = 6.9e-12, Sum P(3) = 6.9e-12
Identities = 20/100 (20%), Positives = 46/100 (46%)
Query: 280 VSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKL 339
+S +T LV LLS+ E+ +V + ++K +++ ++ + I
Sbjct: 436 ISEVTDTCLNGLVCLLSNRDEI----------VVAESVVVIKKLLQMQPAQHGEIIRHMA 485
Query: 340 EKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRA 379
+ LD + ++A+I ++ E E ++ D +RK ++
Sbjct: 486 KLLDSITVPVARASILWLIGENCERVPKIAPDVLRKMAKS 525
Score = 37 (18.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 622 LDQLKDLLSDSNPMVVANAVAALSEM 647
L+ L LLS+ + +VVA +V + ++
Sbjct: 444 LNGLVCLLSNRDEIVVAESVVVIKKL 469
>UNIPROTKB|Q32PG1 [details] [associations]
symbol:AP3B1 "AP-3 complex subunit beta-1" species:9913
"Bos taurus" [GO:0048490 "anterograde synaptic vesicle transport"
evidence=ISS] [GO:0008089 "anterograde axon cargo transport"
evidence=ISS] [GO:0030665 "clathrin-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0051138 "positive regulation of NK T cell differentiation"
evidence=IEA] [GO:0048007 "antigen processing and presentation,
exogenous lipid antigen via MHC class Ib" evidence=IEA] [GO:0032438
"melanosome organization" evidence=IEA] [GO:0019903 "protein
phosphatase binding" evidence=IEA] [GO:0007596 "blood coagulation"
evidence=IEA] [GO:0006622 "protein targeting to lysosome"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0030123
"AP-3 adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 GO:GO:0005794 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0007596 GO:GO:0006897
GO:GO:0008089 eggNOG:COG5096 GO:GO:0030665 PANTHER:PTHR11134
GO:GO:0032438 EMBL:BC108129 IPI:IPI00698557 RefSeq:NP_001070002.1
UniGene:Bt.8350 ProteinModelPortal:Q32PG1 STRING:Q32PG1
PRIDE:Q32PG1 Ensembl:ENSBTAT00000006605 GeneID:767602
KEGG:bta:767602 CTD:8546 GeneTree:ENSGT00530000063546
HOGENOM:HOG000033978 HOVERGEN:HBG050519 InParanoid:Q32PG1 KO:K12397
OMA:KRIVGMI OrthoDB:EOG4H729X NextBio:20918018 GO:GO:0030123
GO:GO:0048490 GO:GO:0048007 GO:GO:0051138 GO:GO:0006622
PANTHER:PTHR11134:SF1 Uniprot:Q32PG1
Length = 1084
Score = 302 (111.4 bits), Expect = 2.8e-38, Sum P(3) = 2.8e-38
Identities = 68/201 (33%), Positives = 114/201 (56%)
Query: 491 LHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNT 550
L + ++ + GK+ S LFP VV + + N+E+KKLVY+YL+ YA+ D+A+++++T
Sbjct: 60 LDAMKRIVGMIAKGKNASELFPAVVKNVASKNIEIKKLVYVYLVRYAEEQQDLALLSIST 119
Query: 551 FVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYD 610
F + +D N LIRA A+R + IRV I + +++ D PYVRK AA + KLY
Sbjct: 120 FQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQKLYS 179
Query: 611 INAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLT 670
++ + + + ++ ++ LL D + +V + V A E+ + LI N + KL
Sbjct: 180 LDPE--QKEMLIEIIEKLLKDKSTLVAGSVVMAFEEV---CPDRIDLIHKNYR---KLCN 231
Query: 671 ALNECTEWGQVFILDSLSNYS 691
L + EWGQV I+ L+ Y+
Sbjct: 232 LLVDVEEWGQVVIIHMLTRYA 252
Score = 195 (73.7 bits), Expect = 3.0e-29, Sum P(3) = 3.0e-29
Identities = 39/119 (32%), Positives = 70/119 (58%)
Query: 287 LAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMI 346
++ LV LL S EVQY+ L+NI + +R + + +K F+V+ D +K+ KL+I+
Sbjct: 335 ISKSLVRLLRSSREVQYIVLQNIATMSIQRKGMFEPYLKSFYVRSTDATMIKILKLEILT 394
Query: 347 RLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK 405
LA++ANI+ +L E + Y D F ++ IGRCA + + ++ C++ L+ L+ +
Sbjct: 395 NLANEANISTLLREFQTYVKSQDKQFAAATIQTIGRCATSITEVSDTCLNGLVCLLSNR 453
Score = 154 (59.3 bits), Expect = 3.0e-29, Sum P(3) = 3.0e-29
Identities = 50/170 (29%), Positives = 89/170 (52%)
Query: 11 KKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVY 70
KK E +LK L S+ + + GK+ S LFP VV + + N+E+KKLVY
Sbjct: 42 KKNE--DLKQMLESNKDSAKLDAMKRIVGMIAKGKNASELFPAVVKNVASKNIEIKKLVY 99
Query: 71 LYLMNYAKSHPDMAIMAFSTFFYQKS---------SSSFQCMIDIRSIPLFDLCSSVGVF 121
+YL+ YA+ D+A+++ STF Q++ +S+ + + IR +P+ + + +
Sbjct: 100 VYLVRYAEEQQDLALLSISTF--QRALKDPNQLIRASALRVLSSIR-VPI--IVPIMMLA 154
Query: 122 VKDCE-DSNPLIR---ALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYV 167
+K+ D +P +R A A++ + + ++ E L E + K LKD+ V
Sbjct: 155 IKEASADLSPYVRKNAAHAIQKLYSLDPEQ-KEMLIEIIEKLLKDKSTLV 203
Score = 128 (50.1 bits), Expect = 2.8e-38, Sum P(3) = 2.8e-38
Identities = 36/119 (30%), Positives = 61/119 (51%)
Query: 695 DREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLS 754
D + + + P L NAAVV++ ++ + E +S LV LL
Sbjct: 294 DPDHRLLIRNTKPLLQSRNAAVVMAVAQLYWHIAPK--SEAGIISK-------SLVRLLR 344
Query: 755 SEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIA 813
S EVQY+ L+NI + +R + + +K F+V+ D +K+ KL+I+ LA++ANI+
Sbjct: 345 SSREVQYIVLQNIATMSIQRKGMFEPYLKSFYVRSTDATMIKILKLEILTNLANEANIS 403
Score = 123 (48.4 bits), Expect = 4.8e-26, Sum P(3) = 4.8e-26
Identities = 28/89 (31%), Positives = 49/89 (55%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ F + +D N LIRA A+R + IRV I + +++ D PYVRK AA +
Sbjct: 116 SISTFQRALKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEASADLSPYVRKNAAHAIQ 175
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KLY ++ + + + ++ ++ LL D + +
Sbjct: 176 KLYSLDPE--QKEMLIEIIEKLLKDKSTL 202
Score = 118 (46.6 bits), Expect = 2.8e-38, Sum P(3) = 2.8e-38
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 818 VVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERI 871
VV E++VVIK + + P ++ II + + LD++ P ARAS++W+IGE ER+
Sbjct: 457 VVAESVVVIKKLLQMQPMQHGEIIKHMAKLLDSITVPVARASILWLIGENCERV 510
Score = 97 (39.2 bits), Expect = 2.1e-26, Sum P(4) = 2.1e-26
Identities = 37/145 (25%), Positives = 62/145 (42%)
Query: 408 ERIDN-ADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQDSD 466
ER+ A ++L + F E+ V+LQ+L KL+L T+ L Q +L+L D
Sbjct: 508 ERVPKIAPDVLRKTAKSFTSEDDLVKLQILNLGAKLYLTNSKQTKLLTQYILNLGKYDQ- 566
Query: 467 NPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQ---TDNL 523
N D+RDR +L+ L + + + + + F D + + L
Sbjct: 567 NYDIRDRTRFIRQLIVPNEKSGALSKYAKKIFLAQKPAPLLESPFKDRDHFQLGTLSHTL 626
Query: 524 ELKKLVYLYLMNYAKSHPDMAIMAV 548
K YL L N+ + PD ++ V
Sbjct: 627 NTKATGYLELSNWPEVAPDPSVRNV 651
Score = 73 (30.8 bits), Expect = 1.3e-24, Sum P(3) = 1.3e-24
Identities = 25/99 (25%), Positives = 52/99 (52%)
Query: 709 LAHANAAVVLSAVKVLMKLMEMLPGE-GDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNI 767
L++ + VV +V V+ KL++M P + G+ + + K L +T+ + + ++ N
Sbjct: 450 LSNRDEIVVAESVVVIKKLLQMQPMQHGEIIKHMAKLLDS--ITVPVARASILWLIGENC 507
Query: 768 NLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRL 806
+ + PD+L+ K F + D + VKL+ L++ +L
Sbjct: 508 ERVPKIAPDVLRKTAKSFTSE--DDL-VKLQILNLGAKL 543
Score = 51 (23.0 bits), Expect = 1.0e-21, Sum P(4) = 1.0e-21
Identities = 18/57 (31%), Positives = 25/57 (43%)
Query: 560 PLIRALAVRTMG--CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 614
P+ RA + +G C RV KI + K ED V+ AKLY N++
Sbjct: 493 PVARASILWLIGENCERVPKIAPDVLRKTAKSFTSEDDLVKLQILNLGAKLYLTNSK 549
Score = 38 (18.4 bits), Expect = 2.1e-26, Sum P(4) = 2.1e-26
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 644 LSEMNEASTSGVALIEMNAQTI--NKLLTALN 673
LS MNE ST+ +A + A ++ K++ N
Sbjct: 990 LSGMNETSTTIIAAPQNFASSVILQKIVNVAN 1021
Score = 38 (18.4 bits), Expect = 2.6e-10, Sum P(4) = 2.6e-10
Identities = 12/69 (17%), Positives = 36/69 (52%)
Query: 311 LIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDV 370
++V + ++K +++ +++ + I + LD + ++A+I ++ E E ++
Sbjct: 456 IVVAESVVVIKKLLQMQPMQHGEIIKHMAKLLDSITVPVARASILWLIGENCERVPKIAP 515
Query: 371 DFVRKAVRA 379
D +RK ++
Sbjct: 516 DVLRKTAKS 524
Score = 37 (18.1 bits), Expect = 2.7e-20, Sum P(4) = 2.7e-20
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 622 LDQLKDLLSDSNPMVVANAVAALSEM 647
L+ L LLS+ + +VVA +V + ++
Sbjct: 443 LNGLVCLLSNRDEIVVAESVVVIKKL 468
>SGD|S000003765 [details] [associations]
symbol:APL1 "Beta-adaptin" species:4932 "Saccharomyces
cerevisiae" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005905 "coated
pit" evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA;IC] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030122 "AP-2 adaptor complex"
evidence=IDA] [GO:0030139 "endocytic vesicle" evidence=IDA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR016342 InterPro:IPR026739
Pfam:PF01602 PIRSF:PIRSF002291 SGD:S000003765 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
EMBL:BK006943 GO:GO:0008565 GO:GO:0030122 eggNOG:COG5096
HOGENOM:HOG000163270 PANTHER:PTHR11134 OrthoDB:EOG476P7N
EMBL:M64998 EMBL:X87611 EMBL:Z49505 PIR:S57020 RefSeq:NP_012538.3
RefSeq:NP_012540.3 ProteinModelPortal:P27351 SMR:P27351
DIP:DIP-915N IntAct:P27351 MINT:MINT-504477 STRING:P27351
PaxDb:P27351 PeptideAtlas:P27351 EnsemblFungi:YJR005W GeneID:853461
GeneID:853463 KEGG:sce:YJR005W KEGG:sce:YJR007W CYGD:YJR005w
KO:K03237 OMA:TDIDIQM NextBio:974041 ArrayExpress:P27351
Genevestigator:P27351 GermOnline:YJR005W Uniprot:P27351
Length = 700
Score = 306 (112.8 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 92/365 (25%), Positives = 185/365 (50%)
Query: 495 RLVIASMTVGK--DVSALFPDVVNCMQT-DNLELKKLVYLYLMNYAKSHPDMAIMAVNTF 551
R +IA++ +G ++S LF +++ Q D+LE+K++ + Y+ P A A+
Sbjct: 39 RKIIANLVLGNYGEMSVLFSELLKFWQIEDDLEVKRICHEYIRVIGALKPQQAREALPFI 98
Query: 552 VKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDP--YVRKTAAVCVAKLY 609
+ D + + ++ +A+RT+ + V ++++ + + + + P V +TA + L
Sbjct: 99 MDDFKSRDEKLQIMALRTLVLVPVKELSDQAFDCIISLVNHKSPPEQVTRTAIYALLDLD 158
Query: 610 DINAQLVEDQGFLDQLKDLLS--DSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINK 667
+I+ + V G L D++ S+P V+ A+ L ++E + + + + +
Sbjct: 159 EIDHERV--LGLSSILHDIVKAQSSSPEVIVAALHTLYSIHEKNAN-MEPFRIPLELAFD 215
Query: 668 LLTALNECTEWGQVFILDSLS-NYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMK 726
+L L E EW + +L+ L+ + P+ + + E P L N VVL+++K +M
Sbjct: 216 MLELLPELNEWNKATVLEVLTTSVVPQHYLDTHEMIELALPYLQQVNTYVVLNSLKFIMY 275
Query: 727 LMEMLPGEGDFVS-TLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPD-ILKHEMKV 784
L+ + D + TL +KL+ ++ LL PE+Q++ LRN+ L++ R +L+ ++
Sbjct: 276 LLNYV----DVIKETLAEKLSNSVIALLDKPPELQFLVLRNVILLLLSRESSLLRLDISY 331
Query: 785 FFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETIISTL 844
FF++YNDPIY+K KL+ + LA++ + ++ ++E DI + K I L
Sbjct: 332 FFIEYNDPIYIKDTKLECLYLLANKETLPRI---LEELEQYATDIDIQMSRKSVRAIGNL 388
Query: 845 CENLD 849
LD
Sbjct: 389 AVKLD 393
Score = 277 (102.6 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 81/268 (30%), Positives = 142/268 (52%)
Query: 282 TLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPD-ILKHEMKVFFVKYNDPIYVKLE 340
TL +KL+ ++ LL PE+Q++ LRN+ L++ R +L+ ++ FF++YNDPIY+K
Sbjct: 286 TLAEKLSNSVIALLDKPPELQFLVLRNVILLLLSRESSLLRLDISYFFIEYNDPIYIKDT 345
Query: 341 KLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKV-EQSAERCVSTLL 399
KL+ + LA++ + ++L EL++YAT++D+ RK+VRAIG A+K+ E S CV+ LL
Sbjct: 346 KLECLYLLANKETLPRILEELEQYATDIDIQMSRKSVRAIGNLAVKLDEDSVHDCVAVLL 405
Query: 400 DLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLS 459
DL++ + + + L + + N + + L ++ ++ P ++
Sbjct: 406 DLLEFGVDYVVQEIISVFRNILRKYPN-NFKANVTELVKHTEV-VQEPESKNAMIW---- 459
Query: 460 LATQDSDN-PDLRD--RGFIYWRLLSTGNT-FYILLHLTRLVIASMTVGKDVSALFPDVV 515
+ TQ SD P+ + R F T F IL + I S T K+ L D++
Sbjct: 460 IITQYSDVIPNYLELFRVFSSNMFSETLEVQFSILNSAIKFFIRSPT--KETEELCMDLL 517
Query: 516 N-CMQTDN---LELKKLVYLYLMNYAKS 539
C+ +N L K L+Y L++ K+
Sbjct: 518 KGCIDHENNPDLRDKTLMYWRLLSLTKT 545
Score = 166 (63.5 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 56/229 (24%), Positives = 107/229 (46%)
Query: 332 NDPIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSA 391
+D + V L+ L+ + Q I+ + L++Y +F + + E +
Sbjct: 398 HDCVAVLLDLLEFGVDYVVQEIISVFRNILRKYPN----NFKANVTELVKHTEVVQEPES 453
Query: 392 ERCVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPT-DT 450
+ + ++ T+Y++ I N EL F E +VQ +L + +K F++ PT +T
Sbjct: 454 KNAMIWII----TQYSDVIPNYLELFRVFSSNMFSETLEVQFSILNSAIKFFIRSPTKET 509
Query: 451 QELVQQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGK----D 506
+EL +L +NPDLRD+ +YWRLLS T I +T + S+ G+ +
Sbjct: 510 EELCMDLLKGCIDHENNPDLRDKTLMYWRLLSLTKTSRISNAITFESLKSVLDGELPLIE 569
Query: 507 VSA-LFPDVVNCMQTD-----NLELKKLVYLYLMNYAKSHPDMAIMAVN 549
++ L P V+ ++ + ++ LK + +++ +N K P I+ N
Sbjct: 570 MNTKLDPTVLEELELNIGTIVSIYLKPVSHIFRLNKTKLLPQSPILNPN 618
Score = 153 (58.9 bits), Expect = 1.1e-34, Sum P(2) = 1.1e-34
Identities = 29/67 (43%), Positives = 46/67 (68%)
Query: 815 VNYVVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNA 874
V+YVVQE I V ++I RKYPN ++ ++ L ++ + + EPE++ +MIWII +Y++ I N
Sbjct: 412 VDYVVQEIISVFRNILRKYPNNFKANVTELVKHTEVVQEPESKNAMIWIITQYSDVIPNY 471
Query: 875 DELLESF 881
EL F
Sbjct: 472 LELFRVF 478
Score = 56 (24.8 bits), Expect = 2.6e-21, Sum P(2) = 2.6e-21
Identities = 24/93 (25%), Positives = 42/93 (45%)
Query: 1 MTDSKYFTTTKKGEI------FELKGELNSDXXXXXXXXXXXXIASMTVGK--DVSALFP 52
M+D K F K EI F +K + S+ IA++ +G ++S LF
Sbjct: 1 MSDQKVFARYKANEIVTDLQHFGVK-KFKSNITRRKNALRKI-IANLVLGNYGEMSVLFS 58
Query: 53 DVVNCMQT-DNLELKKLVYLYLMNYAKSHPDMA 84
+++ Q D+LE+K++ + Y+ P A
Sbjct: 59 ELLKFWQIEDDLEVKRICHEYIRVIGALKPQQA 91
Score = 49 (22.3 bits), Expect = 2.2e-08, Sum P(3) = 2.2e-08
Identities = 36/169 (21%), Positives = 77/169 (45%)
Query: 291 LVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLA- 349
+V SS PEV AL + I +K + M+ F + P+ + + L+++ L
Sbjct: 175 IVKAQSSSPEVIVAALHTLYSIHEKNAN-----MEPFRI----PLELAFDMLELLPELNE 225
Query: 350 -SQANIAQVLSELKEYATEVDV-DFVRKAVRAIGRCAIKVEQSAERCVSTLL---DLIQT 404
++A + +VL+ +D + + A+ + + V ++ + + LL D+I+
Sbjct: 226 WNKATVLEVLTTSVVPQHYLDTHEMIELALPYLQQVNTYVVLNSLKFIMYLLNYVDVIKE 285
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQEL 453
AE++ N+ + + L D+ ++Q +L ++ L L R + L
Sbjct: 286 TLAEKLSNS---VIALL----DKPPELQFLVLRNVILLLLSRESSLLRL 327
>UNIPROTKB|B1ALD2 [details] [associations]
symbol:AP4B1 "AP-4 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 Pfam:PF01602 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 GO:GO:0005802 PANTHER:PTHR11134 EMBL:AL137856
UniGene:Hs.515048 HGNC:HGNC:572 HOGENOM:HOG000294128
IPI:IPI00643929 SMR:B1ALD2 STRING:B1ALD2 Ensembl:ENST00000369571
HOVERGEN:HBG091836 Uniprot:B1ALD2
Length = 262
Score = 378 (138.1 bits), Expect = 6.5e-34, P = 6.5e-34
Identities = 79/231 (34%), Positives = 134/231 (58%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VI MT G D+S +F ++V T ++ KKLVYLY+ YA PD+A++A+NT KDC
Sbjct: 36 VIRYMTQGLDMSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCS 95
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NP++R LA+R+M +R+ + EY+ +P+ L+D+ YVR+ A + AK+++++
Sbjct: 96 DPNPMVRGLALRSMCSLRMPGVQEYIQQPILNGLRDKASYVRRVAVLGCAKMHNLHGDSE 155
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
D +++L LL D +P+VV N + +L E+ + GV + N + LL +++
Sbjct: 156 VDGALVNELYSLLRDQDPIVVVNCLRSLEEILKQE-GGVVI---NKPIAHHLLNRMSKLD 211
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKL 727
+WGQ +L+ L Y P+ + E I + L ++ VV+ A K+ + L
Sbjct: 212 QWGQAEVLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFLIL 262
Score = 163 (62.4 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 29/89 (32%), Positives = 55/89 (61%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
++ KDC D NP++R LA+R+M +R+ + EY+ +P+ L+D+ YVR+ A + A
Sbjct: 86 AINTLCKDCSDPNPMVRGLALRSMCSLRMPGVQEYIQQPILNGLRDKASYVRRVAVLGCA 145
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
K+++++ D +++L LL D +P+
Sbjct: 146 KMHNLHGDSEVDGALVNELYSLLRDQDPI 174
Score = 134 (52.2 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 50/162 (30%), Positives = 76/162 (46%)
Query: 38 IASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQKSS 97
I MT G D+S +F ++V T ++ KKLVYLY+ YA PD+A++A +T K
Sbjct: 37 IRYMTQGLDMSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLC--KDC 94
Query: 98 SSFQCMIDIRSIPLFDLCS--SVGV-------FVKDCEDSNPLIRALAVRTMGCIRVDKI 148
S M+ R + L +CS GV + D +R +AV +GC ++ +
Sbjct: 95 SDPNPMV--RGLALRSMCSLRMPGVQEYIQQPILNGLRDKASYVRRVAV--LGCAKMHNL 150
Query: 149 ---TEY---LCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 184
+E L L L+D+DP V C+ L +I Q
Sbjct: 151 HGDSEVDGALVNELYSLLRDQDPIV---VVNCLRSLEEILKQ 189
>UNIPROTKB|F1NY63 [details] [associations]
symbol:AP3B2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0030123 "AP-3 adaptor complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0008089 "anterograde axon cargo transport" evidence=IEA]
[GO:0048490 "anterograde synaptic vesicle transport" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
InterPro:IPR026740 Pfam:PF01602 PIRSF:PIRSF037096 GO:GO:0005634
GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 PANTHER:PTHR11134
GeneTree:ENSGT00530000063546 GO:GO:0030123 PANTHER:PTHR11134:SF1
OMA:ANLGRVP EMBL:AADN02051067 IPI:IPI00585101
Ensembl:ENSGALT00000003336 Uniprot:F1NY63
Length = 1060
Score = 317 (116.6 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
Identities = 72/201 (35%), Positives = 117/201 (58%)
Query: 491 LHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNT 550
L + ++A + GK+ S LFP VV + N+E+KKLVY+YL+ YA+ D+A+++++T
Sbjct: 17 LEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSIST 76
Query: 551 FVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYD 610
F + +D N LIRA A+R + IRV I + +++ D PYVRKTAA + KLY
Sbjct: 77 FQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYS 136
Query: 611 INAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLT 670
+++ +DQ ++ ++ LL+D +V + V A E+ + LI N + KL
Sbjct: 137 LDSDQ-KDQ-LIEVIEKLLADKTTLVAGSVVMAFEEV---CPERIDLIHKNYR---KLCN 188
Query: 671 ALNECTEWGQVFILDSLSNYS 691
L + EWGQV I++ L+ Y+
Sbjct: 189 LLIDVEEWGQVVIINMLTRYA 209
Score = 221 (82.9 bits), Expect = 7.0e-31, Sum P(3) = 7.0e-31
Identities = 42/119 (35%), Positives = 73/119 (61%)
Query: 287 LAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMI 346
+A LV LL S EVQYV L+N+ + KR + + +K F+++ DP +K+ KL+++
Sbjct: 299 IAKALVRLLRSHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLT 358
Query: 347 RLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK 405
LA++ NI+ +L E + Y +D DFV ++AIGRCA + + + C++ L+ L+ +
Sbjct: 359 NLANETNISTILREFQTYIRSMDKDFVAATIQAIGRCATNIGKVRDTCLNGLVQLLSNR 417
Score = 141 (54.7 bits), Expect = 7.0e-31, Sum P(3) = 7.0e-31
Identities = 47/164 (28%), Positives = 84/164 (51%)
Query: 17 ELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNY 76
+LK L+S+ +A + GK+ S LFP VV + N+E+KKLVY+YL+ Y
Sbjct: 3 DLKEMLDSNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRY 62
Query: 77 AKSHPDMAIMAFSTFFYQKS---------SSSFQCMIDIRSIPLFDLCSSVGVFVKDC-E 126
A+ D+A+++ STF Q+ +S+ + + IR +P+ + + + +K+
Sbjct: 63 AEEQQDLALLSISTF--QRGLKDPNQLIRASALRVLSSIR-VPI--IVPIMMLAIKEAAS 117
Query: 127 DSNPLIR---ALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYV 167
D +P +R A A+ + + D+ + L E + K L D+ V
Sbjct: 118 DMSPYVRKTAAHAIPKLYSLDSDQ-KDQLIEVIEKLLADKTTLV 160
Score = 140 (54.3 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 65/273 (23%), Positives = 122/273 (44%)
Query: 552 VKDC-EDSNPLIR---ALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAK 607
+K+ D +P +R A A+ + + D+ + L E + K L D+ V + + +
Sbjct: 112 IKEAASDMSPYVRKTAAHAIPKLYSLDSDQ-KDQLIEVIEKLLADKTTLVAGSVVMAFEE 170
Query: 608 LYDINAQLVEDQGFLDQLKDLLSDSNP---MVVANAVAALSEMNEASTS-GVALIEMNAQ 663
+ L+ +L +LL D +V+ N + + S + +L+E +A+
Sbjct: 171 VCPERIDLIHKN--YRKLCNLLIDVEEWGQVVIINMLTRYARTQFLSPNQNESLLEESAE 228
Query: 664 TINKLLTALNECTEWGQVFILDSLSNYSPKD-DREAQSICERITPRLAHANAAVVLSAVK 722
+ E T+ + SL+ P D + + + P L NAAVV++ +
Sbjct: 229 --KAFYGSEEEDTKDAKAEAA-SLAMRKPYVMDPDHRLLVRNTKPLLQSRNAAVVMAVAQ 285
Query: 723 VLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEM 782
+ L V + K L V LL S EVQYV L+N+ + KR + + +
Sbjct: 286 LYFHLAPKAE-----VGVIAKAL----VRLLRSHSEVQYVVLQNVATMSIKRRGMFEPYL 336
Query: 783 KVFFVKYNDPIYVKLEKLDIMIRLASQANIAQV 815
K F+++ DP +K+ KL+++ LA++ NI+ +
Sbjct: 337 KSFYIRSTDPTQIKILKLEVLTNLANETNISTI 369
Score = 136 (52.9 bits), Expect = 2.3e-30, Sum P(3) = 2.3e-30
Identities = 31/89 (34%), Positives = 51/89 (57%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ F + +D N LIRA A+R + IRV I + +++ D PYVRKTAA +
Sbjct: 73 SISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIP 132
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KLY +++ +DQ ++ ++ LL+D +
Sbjct: 133 KLYSLDSDQ-KDQ-LIEVIEKLLADKTTL 159
Score = 119 (46.9 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
Identities = 22/54 (40%), Positives = 35/54 (64%)
Query: 818 VVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERI 871
VV E++VVIK + + P ++ II + + D + P ARAS++W+IGEY E +
Sbjct: 421 VVAESVVVIKKLLQMQPAQHSEIIKHMAKLTDNIQVPMARASILWLIGEYCEHV 474
Score = 101 (40.6 bits), Expect = 5.1e-29, Sum P(3) = 5.1e-29
Identities = 32/106 (30%), Positives = 56/106 (52%)
Query: 396 STLLDLIQTKYAERIDN-ADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELV 454
+++L LI +Y E + A ++L + F +E V+LQ++ KL+L ++ L
Sbjct: 461 ASILWLIG-EYCEHVPKIAPDVLRKMAKSFTNEEDIVKLQVINLAAKLYLTNSKQSKLLT 519
Query: 455 QQVLSLATQDSDNPDLRDRG-FIYWRLLSTGNTFYILLHLTRLVIA 499
Q VL+LA D N D+RDR FI ++ T + + + +L +A
Sbjct: 520 QYVLNLAKYDQ-NYDIRDRARFIRQLIVPTEKSGALNKYAKKLFLA 564
Score = 58 (25.5 bits), Expect = 1.4e-24, Sum P(3) = 1.4e-24
Identities = 21/98 (21%), Positives = 46/98 (46%)
Query: 709 LAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNIN 768
L++ + VV +V V+ KL++M P + + KL + ++ + ++
Sbjct: 414 LSNRDELVVAESVVVIKKLLQMQPAQHSEIIKHMAKLTDNIQVPMA-RASILWLIGEYCE 472
Query: 769 LIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRL 806
+ + PD+L+ K F N+ VKL+ +++ +L
Sbjct: 473 HVPKIAPDVLRKMAKSFT---NEEDIVKLQVINLAAKL 507
Score = 51 (23.0 bits), Expect = 7.5e-24, Sum P(3) = 7.5e-24
Identities = 16/57 (28%), Positives = 26/57 (45%)
Query: 560 PLIRALAVRTMG--CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 614
P+ RA + +G C V KI + + K +E+ V+ AKLY N++
Sbjct: 457 PMARASILWLIGEYCEHVPKIAPDVLRKMAKSFTNEEDIVKLQVINLAAKLYLTNSK 513
Score = 46 (21.3 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 18/81 (22%), Positives = 46/81 (56%)
Query: 301 VQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKL--DIMIRLASQANIAQVL 358
VQ ++ R+ L+V + ++K +++ ++++ I + KL +I + +A +A+I ++
Sbjct: 411 VQLLSNRD-ELVVAESVVVIKKLLQMQPAQHSE-IIKHMAKLTDNIQVPMA-RASILWLI 467
Query: 359 SELKEYATEVDVDFVRKAVRA 379
E E+ ++ D +RK ++
Sbjct: 468 GEYCEHVPKIAPDVLRKMAKS 488
Score = 41 (19.5 bits), Expect = 8.1e-23, Sum P(3) = 8.1e-23
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 622 LDQLKDLLSDSNPMVVANAVAALSEM 647
L+ L LLS+ + +VVA +V + ++
Sbjct: 407 LNGLVQLLSNRDELVVAESVVVIKKL 432
Score = 38 (18.4 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 9/42 (21%), Positives = 18/42 (42%)
Query: 431 VQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQDSDNPDLRD 472
V + +LT + P + L+++ A S+ D +D
Sbjct: 200 VIINMLTRYARTQFLSPNQNESLLEESAEKAFYGSEEEDTKD 241
>POMBASE|SPAC23H3.06 [details] [associations]
symbol:apl6 "AP-3 adaptor complex subunit Apl6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006896 "Golgi
to vacuole transport" evidence=ISO] [GO:0030123 "AP-3 adaptor
complex" evidence=ISO] [GO:0030665 "clathrin-coated vesicle
membrane" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR026739 InterPro:IPR026740 Pfam:PF01602
PomBase:SPAC23H3.06 GO:GO:0005829 GO:GO:0005634 GO:GO:0006886
EMBL:CU329670 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GenomeReviews:CU329670_GR eggNOG:COG5096 GO:GO:0030665
PANTHER:PTHR11134 GO:GO:0006896 KO:K12397 GO:GO:0030123
PANTHER:PTHR11134:SF1 PIR:T38299 RefSeq:NP_593796.1
ProteinModelPortal:O13939 EnsemblFungi:SPAC23H3.06.1 GeneID:2541771
KEGG:spo:SPAC23H3.06 OMA:RVPVISQ OrthoDB:EOG44F9J9 NextBio:20802862
Uniprot:O13939
Length = 745
Score = 365 (133.5 bits), Expect = 3.4e-31, Sum P(2) = 3.4e-31
Identities = 105/344 (30%), Positives = 180/344 (52%)
Query: 479 RLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAK 538
RLL++ N+ L ++A M G+++S FPDVV + ++N E+++LV++YL+ YA+
Sbjct: 40 RLLNS-NSDAGKLEAINFILAQMMHGENMSLYFPDVVKLVASENPEIRRLVHIYLLQYAE 98
Query: 539 SHPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVR 598
+PD+A+++VNT K D NPL R+ A+R M IRV I + +++C+ D VR
Sbjct: 99 FNPDLALLSVNTVQKTLYDKNPLTRSTAIRVMSSIRVPAINGIVLLAIQQCITDTADRVR 158
Query: 599 KTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALI 658
++AA+ + K Y ++ + Q + +K LLSD++P+VV AAL + +I
Sbjct: 159 QSAALAITKCYSLDPSY-KSQ-LEEHIKTLLSDNSPIVVP---AALFTFEVVCPEKLEII 213
Query: 659 EMNAQTINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVL 718
I L +N+ W +V L +L Y+ ++ E TP H++ +L
Sbjct: 214 HPYYHRICTLFPQMND---WDKVVALKTLVRYA------RLTLPEPSTPS-THSDLKELL 263
Query: 719 SAVK-VLMKLME--MLPGEGDFV----STLTKKLAPPLVTLLSSEPEVQYVALRNINLIV 771
++K L+ ++ G F S + PL+ LL +P V+ LR I+ IV
Sbjct: 264 ESIKSCFFSLLPSTIIAGARAFYYLAPSNQMHLIVEPLLQLLLEKPIVRTTTLRYISQIV 323
Query: 772 QKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQV 815
K P++ K+ +K FF+ +D L K++I+ RL N +Q+
Sbjct: 324 YKTPELFKNHIKSFFLIASDSDDTCLLKINILSRLLDAQNSSQI 367
Score = 160 (61.4 bits), Expect = 2.4e-21, Sum P(3) = 2.4e-21
Identities = 47/153 (30%), Positives = 79/153 (51%)
Query: 287 LAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMI 346
+ PL+ LL +P V+ LR I+ IV K P++ K+ +K FF+ +D L K++I+
Sbjct: 297 IVEPLLQLLLEKPIVRTTTLRYISQIVYKTPELFKNHIKSFFLIASDSDDTCLLKINILS 356
Query: 347 RLASQANIAQVLSELKEYA-TEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK 405
RL N +Q+L EL Y + + AV+A+G A A C++TLL L+++
Sbjct: 357 RLLDAQNSSQILPELLYYINSHPNPSVASTAVKALGDFASANISMAPSCLNTLLLLLKSH 416
Query: 406 YAERIDNADELLESFLEGFHDENTQVQLQLLTA 438
+ + A L + H++ ++ LQ L A
Sbjct: 417 NSLIVTEAASSLRLLI---HNDPKEIYLQYLAA 446
Score = 154 (59.3 bits), Expect = 2.4e-21, Sum P(3) = 2.4e-21
Identities = 49/172 (28%), Positives = 86/172 (50%)
Query: 22 LNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHP 81
LNS+ +A M G+++S FPDVV + ++N E+++LV++YL+ YA+ +P
Sbjct: 42 LNSNSDAGKLEAINFILAQMMHGENMSLYFPDVVKLVASENPEIRRLVHIYLLQYAEFNP 101
Query: 82 DMAIMAFSTF---FYQKS----SSSFQCMIDIRSIPLFDLCSSVGVFVKDC-EDSNPLIR 133
D+A+++ +T Y K+ S++ + M IR +P + V + ++ C D+ +R
Sbjct: 102 DLALLSVNTVQKTLYDKNPLTRSTAIRVMSSIR-VPAIN--GIVLLAIQQCITDTADRVR 158
Query: 134 -ALAVRTMGCIRVD-KITEYLCEPLRKCLKDEDPYVRKTA-----AVCVAKL 178
+ A+ C +D L E ++ L D P V A VC KL
Sbjct: 159 QSAALAITKCYSLDPSYKSQLEEHIKTLLSDNSPIVVPAALFTFEVVCPEKL 210
Score = 127 (49.8 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 30/89 (33%), Positives = 49/89 (55%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
SV K D NPL R+ A+R M IRV I + +++C+ D VR++AA+ +
Sbjct: 107 SVNTVQKTLYDKNPLTRSTAIRVMSSIRVPAINGIVLLAIQQCITDTADRVRQSAALAIT 166
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
K Y ++ + Q + +K LLSD++P+
Sbjct: 167 KCYSLDPSY-KSQ-LEEHIKTLLSDNSPI 193
Score = 72 (30.4 bits), Expect = 2.4e-21, Sum P(3) = 2.4e-21
Identities = 43/160 (26%), Positives = 70/160 (43%)
Query: 415 ELLESFLEGFHDENTQVQLQLLTAIVKLFL-----KRPTDTQE-------LVQQVLSLAT 462
++L ++ F DE +V+ Q+L V+L++ ++ D + L VLSL
Sbjct: 477 DVLRIAVKTFADETLEVKYQILELSVRLYVLSHSEEKQNDLESRDDVVSLLFNYVLSLIH 536
Query: 463 QDSDNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQTDN 522
D DLRDR Y L ST ++ + R+V+ S G + C+ T +
Sbjct: 537 FDMSY-DLRDRARFYKELASTPSSEFT----RRIVLESK--GNSQKEIIASRDYCIGTAS 589
Query: 523 LELKKLVYLY--LMNYAKSHPDMAIMAVNTFVKDCEDSNP 560
L L + V Y + N+A D+ +V +KD NP
Sbjct: 590 LCLNEDVMGYEPIPNWADVS-DLPPDSVREGIKDVLPINP 628
Score = 58 (25.5 bits), Expect = 3.4e-31, Sum P(2) = 3.4e-31
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 818 VVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEY 867
+V EA ++ + P E + L +TL+ P A++ +W+I E+
Sbjct: 420 IVTEAASSLRLLIHNDPK--EIYLQYLAATYETLEVPRAKSVTLWLISEH 467
Score = 54 (24.1 bits), Expect = 4.4e-09, Sum P(3) = 4.4e-09
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 604 CVAKLYDINAQLVEDQGFLDQLKDLL----SDSNPMVVANAVAALSEMNEASTS 653
C+ K+ +I ++L++ Q L +LL S NP V + AV AL + A+ S
Sbjct: 348 CLLKI-NILSRLLDAQNSSQILPELLYYINSHPNPSVASTAVKALGDFASANIS 400
Score = 42 (19.8 bits), Expect = 2.9e-18, Sum P(3) = 2.9e-18
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 506 DVSALFPDVVNCMQTDNLELKKLVYLYLMN-YAKSHPDMAIMAVNTFVKDCEDSNPLIR 563
DVS L PD V D L + + N Y+ + P + ++ + F +D D+N + R
Sbjct: 607 DVSDLPPDSVREGIKDVLPINP----HTGNIYSNNSPGVKALSSDNFKRDFGDTNAINR 661
Score = 37 (18.1 bits), Expect = 9.3e-18, Sum P(3) = 9.3e-18
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 541 PDMAIMAVNTFVKDCEDSNPLIRALAVR 568
PD+ +AV TF + + I L+VR
Sbjct: 476 PDVLRIAVKTFADETLEVKYQILELSVR 503
>UNIPROTKB|B7ZKR7 [details] [associations]
symbol:AP3B2 "AP3B2 protein" species:9606 "Homo sapiens"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030123
"AP-3 adaptor complex" evidence=IEA] [GO:0044431 "Golgi apparatus
part" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 InterPro:IPR013041
InterPro:IPR008153 GO:GO:0005634 GO:GO:0005794 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 SUPFAM:SSF49348 Gene3D:2.60.40.1230 GO:GO:0044431
HOVERGEN:HBG050519 GO:GO:0030123 PANTHER:PTHR11134:SF1
IPI:IPI01011317 UniGene:Hs.199593 HGNC:HGNC:567 EMBL:AC105339
EMBL:FJ695193 EMBL:BC143342 SMR:B7ZKR7 STRING:B7ZKR7
Ensembl:ENST00000535348 UCSC:uc010uoj.2 Uniprot:B7ZKR7
Length = 1050
Score = 220 (82.5 bits), Expect = 2.9e-30, Sum P(3) = 2.9e-30
Identities = 43/119 (36%), Positives = 72/119 (60%)
Query: 287 LAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMI 346
+A LV LL S EVQYV L+N+ + KR + + +K F+++ DP +K+ KL+++
Sbjct: 308 IAKALVRLLRSHSEVQYVVLQNVATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLT 367
Query: 347 RLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTK 405
LA++ NI VL E + Y +D DFV ++AIGRCA + + + C++ L+ L+ +
Sbjct: 368 NLANETNIPTVLREFQTYIRSMDKDFVAATIQAIGRCATNIGRVRDTCLNGLVQLLSNR 426
Score = 165 (63.1 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 83/349 (23%), Positives = 149/349 (42%)
Query: 480 LLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLE-LKKLVYLYLMNYAK 538
+L T N + L + ++A + GK+ S LFP VV + N+E +L+ +
Sbjct: 45 MLDT-NKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEDPNQLIRASALRVLS 103
Query: 539 SHPDMAIMAVNTF-VKDC-EDSNPLIR---ALAVRTMGCIRVDKITEYLCEPLRKCLKDE 593
S I+ + +K+ D +P +R A A+ + + D+ + L E + K L D+
Sbjct: 104 SIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLDSDQ-KDQLIEVIEKLLADK 162
Query: 594 DPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNP---MVVANAVAALSEMNEA 650
V + + ++ L+ +L +LL D +V+ + + +
Sbjct: 163 TTLVAGSVVMAFEEVCPERIDLIHKN--YRKLCNLLIDVEEWGQVVIISMLTRYARTQFL 220
Query: 651 S-TSGVALIEMNAQTI---NKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERIT 706
S T +L+E NA+ ++ A +E S Y D +
Sbjct: 221 SPTQNESLLEENAEKAFYGSEEDEAKGAGSEETAAAAAPSRKPYVMDPDHRL--LLRNTK 278
Query: 707 PRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRN 766
P L +AAVV++ ++ L V + K L V LL S EVQYV L+N
Sbjct: 279 PLLQSRSAAVVMAVAQLYFHLAPKAE-----VGVIAKAL----VRLLRSHSEVQYVVLQN 329
Query: 767 INLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQV 815
+ + KR + + +K F+++ DP +K+ KL+++ LA++ NI V
Sbjct: 330 VATMSIKRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPTV 378
Score = 136 (52.9 bits), Expect = 2.9e-30, Sum P(3) = 2.9e-30
Identities = 35/95 (36%), Positives = 54/95 (56%)
Query: 113 DLCSSV--GVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKT 170
DL +V V K+ ED N LIRA A+R + IRV I + +++ D PYVRKT
Sbjct: 73 DLFPAVVKNVACKNIEDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKT 132
Query: 171 AAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
AA + KLY +++ +DQ ++ ++ LL+D +
Sbjct: 133 AAHAIPKLYSLDSDQ-KDQ-LIEVIEKLLADKTTL 165
Score = 119 (46.9 bits), Expect = 2.9e-30, Sum P(3) = 2.9e-30
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 818 VVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERI 871
VV E++VVIK + + P ++ II L + D + P ARAS++W+IGEY E +
Sbjct: 430 VVAESVVVIKKLLQMQPAQHGEIIKHLAKLTDNIQVPMARASILWLIGEYCEHV 483
Score = 101 (40.6 bits), Expect = 2.1e-28, Sum P(3) = 2.1e-28
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 396 STLLDLIQTKYAERIDN-ADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELV 454
+++L LI +Y E + A ++L + F E V+LQ++ KL+L T+ L
Sbjct: 470 ASILWLIG-EYCEHVPRIAPDVLRKMAKSFTAEEDIVKLQVINLAAKLYLTNSKQTKLLT 528
Query: 455 QQVLSLATQDSDNPDLRDR 473
Q VLSLA D N D+RDR
Sbjct: 529 QYVLSLAKYDQ-NYDIRDR 546
Score = 62 (26.9 bits), Expect = 2.2e-24, Sum P(3) = 2.2e-24
Identities = 26/120 (21%), Positives = 55/120 (45%)
Query: 709 LAHANAAVVLSAVKVLMKLMEMLPGE-GDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNI 767
L++ + VV +V V+ KL++M P + G+ + L K V + + + ++
Sbjct: 423 LSNRDELVVAESVVVIKKLLQMQPAQHGEIIKHLAKLTDNIQVPM--ARASILWLIGEYC 480
Query: 768 NLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIK 827
+ + PD+L+ K F + + VKL+ +++ +L N Q + Q + + K
Sbjct: 481 EHVPRIAPDVLRKMAKSFTAEED---IVKLQVINLAAKLYL-TNSKQTKLLTQYVLSLAK 536
Score = 53 (23.7 bits), Expect = 1.1e-21, Sum P(3) = 1.1e-21
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 17 ELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLE 64
+LK L+++ +A + GK+ S LFP VV + N+E
Sbjct: 41 DLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIE 88
Score = 46 (21.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 19/81 (23%), Positives = 44/81 (54%)
Query: 301 VQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKL--DIMIRLASQANIAQVL 358
VQ ++ R+ L+V + ++K +++ ++ + I L KL +I + +A +A+I ++
Sbjct: 420 VQLLSNRD-ELVVAESVVVIKKLLQMQPAQHGE-IIKHLAKLTDNIQVPMA-RASILWLI 476
Query: 359 SELKEYATEVDVDFVRKAVRA 379
E E+ + D +RK ++
Sbjct: 477 GEYCEHVPRIAPDVLRKMAKS 497
Score = 45 (20.9 bits), Expect = 1.3e-22, Sum P(3) = 1.3e-22
Identities = 15/57 (26%), Positives = 25/57 (43%)
Query: 560 PLIRALAVRTMG--CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 614
P+ RA + +G C V +I + + K E+ V+ AKLY N++
Sbjct: 466 PMARASILWLIGEYCEHVPRIAPDVLRKMAKSFTAEEDIVKLQVINLAAKLYLTNSK 522
Score = 41 (19.5 bits), Expect = 3.3e-22, Sum P(3) = 3.3e-22
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 622 LDQLKDLLSDSNPMVVANAVAALSEM 647
L+ L LLS+ + +VVA +V + ++
Sbjct: 416 LNGLVQLLSNRDELVVAESVVVIKKL 441
>TAIR|locus:2099961 [details] [associations]
symbol:PAT2 "protein affected trafficking 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] [GO:0080171 "lytic
vacuole organization" evidence=IMP] [GO:0006896 "Golgi to vacuole
transport" evidence=IMP] [GO:0051453 "regulation of intracellular
pH" evidence=IMP] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR026739 InterPro:IPR026740 Pfam:PF01602
PIRSF:PIRSF037096 EMBL:CP002686 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 KO:K12397 GO:GO:0030123 PANTHER:PTHR11134:SF1
GO:GO:0080171 IPI:IPI00938719 RefSeq:NP_974443.4 UniGene:At.26631
UniGene:At.35023 ProteinModelPortal:F4IWW1 SMR:F4IWW1 PRIDE:F4IWW1
EnsemblPlants:AT3G55480.2 GeneID:824714 KEGG:ath:AT3G55480
OMA:PVIVPIM Uniprot:F4IWW1
Length = 1115
Score = 306 (112.8 bits), Expect = 5.0e-30, Sum P(2) = 5.0e-30
Identities = 77/199 (38%), Positives = 114/199 (57%)
Query: 493 LTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFV 552
L RL +A + G DVS FP VV + + + E+KKLVYLYL+ YA+ P+ A++++N F
Sbjct: 53 LKRL-LALIAQGFDVSNFFPQVVKNVASQSSEVKKLVYLYLLQYAEKRPNEALLSINYFQ 111
Query: 553 KDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDIN 612
KD D NPL+RA A+RTM IR+ I + KC +D YVR+ AA + KL+D+
Sbjct: 112 KDLGDPNPLVRAWALRTMAGIRLHVIAPLALAAVSKCARDPAVYVRRCAANALPKLHDL- 170
Query: 613 AQLVEDQGFLDQLKD-LLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTA 671
+L E +++L LL+D +P VV A AA + + + LI N + KL
Sbjct: 171 -RLEEHASAIEELVGILLNDHSPGVVGAAAAAFTSI---CPNNFKLIGKNYK---KLCQI 223
Query: 672 LNECTEWGQVFILDSLSNY 690
L + EWGQ+ ++ +L Y
Sbjct: 224 LPDVEEWGQILLIGTLLRY 242
Score = 172 (65.6 bits), Expect = 1.1e-29, Sum P(4) = 1.1e-29
Identities = 42/131 (32%), Positives = 69/131 (52%)
Query: 285 KKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDI 344
KK+ PL+ LL S +YV L NI + + P + + FF+ +D VK KL++
Sbjct: 372 KKIVKPLLFLLRSSSASKYVVLCNILVFAKAVPSLFAPHFENFFICSSDAYQVKAYKLEM 431
Query: 345 MIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI-Q 403
+ +A+ ++IA +L E ++Y + D F V AIG CA ++ C+ LL L+ Q
Sbjct: 432 LSLIATTSSIASILREFEDYIKDPDRRFAADTVAAIGLCAKRLMTIPTTCLDGLLALVRQ 491
Query: 404 TKYAERIDNAD 414
+A ++AD
Sbjct: 492 ESFAGDFESAD 502
Score = 144 (55.7 bits), Expect = 1.1e-29, Sum P(4) = 1.1e-29
Identities = 39/124 (31%), Positives = 61/124 (49%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ F KD D NPL+RA A+RTM IR+ I + KC +D YVR+ AA +
Sbjct: 106 SINYFQKDLGDPNPLVRAWALRTMAGIRLHVIAPLALAAVSKCARDPAVYVRRCAANALP 165
Query: 177 KLYDINAQLVEDQGFLDQLKD-LLSDSNPMXXXXXXXXXXXXPRKSYWQRNLSSRKKQIC 235
KL+D+ +L E +++L LL+D +P ++ + + K++C
Sbjct: 166 KLHDL--RLEEHASAIEELVGILLNDHSPGVVGAAAAAFTSICPNNF--KLIGKNYKKLC 221
Query: 236 WNLP 239
LP
Sbjct: 222 QILP 225
Score = 117 (46.2 bits), Expect = 1.1e-29, Sum P(4) = 1.1e-29
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 38 IASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQK 95
+A + G DVS FP VV + + + E+KKLVYLYL+ YA+ P+ A+++ + ++QK
Sbjct: 57 LALIAQGFDVSNFFPQVVKNVASQSSEVKKLVYLYLLQYAEKRPNEALLSIN--YFQK 112
Score = 116 (45.9 bits), Expect = 5.0e-30, Sum P(2) = 5.0e-30
Identities = 48/180 (26%), Positives = 82/180 (45%)
Query: 673 NECTEW-GQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEML 731
+ CT+ F D+ S + + + + + +P L N+AVVL+A V M
Sbjct: 312 SSCTDTVSSAF--DTKETTSIAHNEDVKILLQCTSPLLWSNNSAVVLAAAGVQWI---MA 366
Query: 732 PGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYND 791
P E KK+ PL+ LL S +YV L NI + + P + + FF+ +D
Sbjct: 367 PLED------VKKIVKPLLFLLRSSSASKYVVLCNILVFAKAVPSLFAPHFENFFICSSD 420
Query: 792 PIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENLDTL 851
VK KL+++ +A+ ++IA + ++E IKD R++ I + L T+
Sbjct: 421 AYQVKAYKLEMLSLIATTSSIASI---LREFEDYIKDPDRRFAADTVAAIGLCAKRLMTI 477
Score = 85 (35.0 bits), Expect = 1.1e-29, Sum P(4) = 1.1e-29
Identities = 15/50 (30%), Positives = 33/50 (66%)
Query: 818 VVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEY 867
V+ +A++ I+ + + P ++E ++ L +LD++ ARA++IW++G Y
Sbjct: 507 VLVQAVMSIQTMIERDPLRHEKVLIQLFRSLDSIKVAAARATIIWMVGVY 556
Score = 52 (23.4 bits), Expect = 2.7e-26, Sum P(4) = 2.7e-26
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 424 FHDENTQVQLQLLTAIVKLFLKRPTDT----QELVQQVLSLATQDSDNPDLRDRGFIYWR 479
F E ++ +LQ+L I K+ + + +V V L D D+RDR +
Sbjct: 578 FKSEASETKLQILNTIAKVLISAEAGDFHMLKRIVVYVFELGEYDLSY-DIRDRTRFLKK 636
Query: 480 LLS 482
LLS
Sbjct: 637 LLS 639
Score = 38 (18.4 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 13/50 (26%), Positives = 19/50 (38%)
Query: 376 AVRAIGRCAIKVEQSAERCVSTLLDLIQTKYAERIDNADELLESFLEGFH 425
A+ A+ +CA RC + L + E +A E L L H
Sbjct: 141 ALAAVSKCARDPAVYVRRCAANALPKLHDLRLEEHASAIEELVGILLNDH 190
>UNIPROTKB|B7Z4X3 [details] [associations]
symbol:AP4B1 "AP-4 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
Pfam:PF01602 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 PANTHER:PTHR11134
EMBL:AL137856 UniGene:Hs.515048 HGNC:HGNC:572 HOVERGEN:HBG106066
EMBL:AK298037 IPI:IPI00922864 SMR:B7Z4X3 STRING:B7Z4X3
Ensembl:ENST00000369566 UCSC:uc010owq.2 Uniprot:B7Z4X3
Length = 302
Score = 205 (77.2 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 38/85 (44%), Positives = 58/85 (68%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VI MT G D+S +F ++V T ++ KKLVYLY+ YA PD+A++A+NT KDC
Sbjct: 36 VIRYMTQGLDMSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLCKDCS 95
Query: 557 DSNPLIRALAVRTMGCIRVDKITEY 581
D NP++R LA+R+M +R+ K+ ++
Sbjct: 96 DPNPMVRGLALRSMCSLRMSKLDQW 120
Score = 192 (72.6 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 38/97 (39%), Positives = 59/97 (60%)
Query: 290 PLVTLLSSEP-EVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRL 348
PL+ SSE E+ +VAL ++ I+ P K FF Y++P Y+KL+K++++ L
Sbjct: 187 PLLAACSSESRELCFVALCHVRQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCEL 246
Query: 349 ASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAI 385
+ N+ QVL EL+ Y T+V DF + A+ AIGRC +
Sbjct: 247 VNDENVQQVLEELRGYCTDVSADFAQAAIFAIGRCLL 283
Score = 185 (70.2 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 53/196 (27%), Positives = 95/196 (48%)
Query: 672 LNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEML 731
+++ +WGQ +L+ L Y P+ + E I + L ++ VV+ A K+ + L +M
Sbjct: 114 MSKLDQWGQAEVLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFLILAKMF 173
Query: 732 PGEGDFVST-LTKKLAPPLVTLLSSEP-EVQYVALRNINLIVQKRPDILKHEMKVFFVKY 789
P V T + ++ PL+ SSE E+ +VAL ++ I+ P K FF Y
Sbjct: 174 P----HVQTDVLVRVKGPLLAACSSESRELCFVALCHVRQILHSLPGHFSSHYKKFFCSY 229
Query: 790 NDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETIIST--LCEN 847
++P Y+KL+K++++ L + N+ QV ++E D+ + I L
Sbjct: 230 SEPHYIKLQKVEVLCELVNDENVQQV---LEELRGYCTDVSADFAQAAIFAIGRCLLLFL 286
Query: 848 LDTLDEPEARASMIWI 863
L+ LD+P A +W+
Sbjct: 287 LENLDQP---ARKLWL 299
Score = 119 (46.9 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 30/79 (37%), Positives = 44/79 (55%)
Query: 38 IASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQKSS 97
I MT G D+S +F ++V T ++ KKLVYLY+ YA PD+A++A +T K
Sbjct: 37 IRYMTQGLDMSGVFMEMVKASATVDIVQKKLVYLYMCTYAPLKPDLALLAINTLC--KDC 94
Query: 98 SSFQCMIDIRSIPLFDLCS 116
S M+ R + L +CS
Sbjct: 95 SDPNPMV--RGLALRSMCS 111
Score = 85 (35.0 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEY 151
++ KDC D NP++R LA+R+M +R+ K+ ++
Sbjct: 86 AINTLCKDCSDPNPMVRGLALRSMCSLRMSKLDQW 120
Score = 47 (21.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 22/85 (25%), Positives = 37/85 (43%)
Query: 386 KVEQSAERCVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLK 445
K++Q + V L Q + E + + LL+SFL+ +L + K+F
Sbjct: 116 KLDQWGQAEVLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFLILAKMFPH 175
Query: 446 RPTDTQELVQQVLSLATQDSDNPDL 470
TD V+ L LA S++ +L
Sbjct: 176 VQTDVLVRVKGPL-LAACSSESREL 199
>WB|WBGene00000163 [details] [associations]
symbol:apb-3 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030123 "AP-3 adaptor complex"
evidence=IEA] [GO:0019915 "lipid storage" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching"
evidence=IGI;IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0007040 "lysosome organization"
evidence=IMP] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR026739 InterPro:IPR026740 Pfam:PF01602
PIRSF:PIRSF037096 GO:GO:0009792 GO:GO:0040007 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0002119
GO:GO:0016192 GO:GO:0010171 GO:GO:0007040 GO:GO:0019915
eggNOG:COG5096 PANTHER:PTHR11134 GeneTree:ENSGT00530000063546
GO:GO:0030123 PANTHER:PTHR11134:SF1 OMA:RVPVISQ EMBL:Z83122
RefSeq:NP_492170.2 ProteinModelPortal:O45718 SMR:O45718
PaxDb:O45718 PRIDE:O45718 EnsemblMetazoa:R11A5.1a.1
EnsemblMetazoa:R11A5.1a.2 GeneID:172553 KEGG:cel:CELE_R11A5.1
UCSC:R11A5.1b CTD:172553 WormBase:R11A5.1a ArrayExpress:O45718
Uniprot:O45718
Length = 945
Score = 349 (127.9 bits), Expect = 4.0e-28, P = 4.0e-28
Identities = 108/363 (29%), Positives = 177/363 (48%)
Query: 469 DLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKL 528
D R R F + + N + + + +I + GKDVS LF VV + N+ELKKL
Sbjct: 23 DNRTR-FADLKAMLDSNKDNLKVDAMKRIINLIAKGKDVSELFAAVVKNVAAKNVELKKL 81
Query: 529 VYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRK 588
V++YL+ YA+ D+A+++++TF + +D N LIR A+R + IRV + + ++
Sbjct: 82 VFVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRGSALRVLTSIRVPMVAPIMLLAIKD 141
Query: 589 CLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMN 648
++D PYVRK AA + KLY + +L E Q +D + LL+D +V+ +AV A E+
Sbjct: 142 AVRDMSPYVRKVAAHAIPKLYSLEPEL-EPQ-LVDCIDFLLADRRSLVLGSAVYAFDEIC 199
Query: 649 EASTSGVALIEMNAQTINKLLTALNECTEWGQVFILDSLSNYSPKD---------DREAQ 699
+++ + L L + EWGQ+ +++ L+ Y+ + D +
Sbjct: 200 PHR------LDLLHKHFRALCRGLADVDEWGQIVMINMLTRYARHELADPDRGPPDTDVV 253
Query: 700 SICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEV 759
+ P L N +VV++ V++ + P ++A LV LL E
Sbjct: 254 LLLNSARPLLQSRNCSVVMAVVQLFY---HVAP------KAQLSQIARALVRLLRGPRET 304
Query: 760 QYVALRNINLIVQKRP------DILKHE----MKVFFVKYNDPIYVKLEKLDIMIRLASQ 809
QYV L NI I ++ P I K +K FFV+ D VK KL ++ L S+
Sbjct: 305 QYVVLTNIATICERNPVEEGTYAISKTMFDPFLKSFFVRSCDSSLVKKLKLHVLTSLVSE 364
Query: 810 ANI 812
AN+
Sbjct: 365 ANV 367
Score = 164 (62.8 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
Identities = 53/167 (31%), Positives = 86/167 (51%)
Query: 286 KLAPPLVTLLSSEPEVQYVALRNINLIVQKRP------DILKHE----MKVFFVKYNDPI 335
++A LV LL E QYV L NI I ++ P I K +K FFV+ D
Sbjct: 289 QIARALVRLLRGPRETQYVVLTNIATICERNPVEEGTYAISKTMFDPFLKSFFVRSCDSS 348
Query: 336 YVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCV 395
VK KL ++ L S+AN+ +L EL+ Y D+ AV AIGRCA++V +++C+
Sbjct: 349 LVKKLKLHVLTSLVSEANVHIILRELQTYVHMSDL--ASPAVEAIGRCAVRVGAVSDQCM 406
Query: 396 STLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKL 442
+ L+ LI + + + +A +++ L + L LL+ +++L
Sbjct: 407 TGLVQLISSSDEKVVCSAVVVIKRLL------HASAPLNLLSRLMRL 447
Score = 138 (53.6 bits), Expect = 3.7e-17, Sum P(2) = 3.7e-17
Identities = 41/134 (30%), Positives = 70/134 (52%)
Query: 17 ELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNY 76
+LK L+S+ I + GKDVS LF VV + N+ELKKLV++YL+ Y
Sbjct: 30 DLKAMLDSNKDNLKVDAMKRIINLIAKGKDVSELFAAVVKNVAAKNVELKKLVFVYLVRY 89
Query: 77 AKSHPDMAIMAFSTFFYQKS---------SSSFQCMIDIRSIPLFDLCSSVGVFVKDC-E 126
A+ D+A+++ STF Q++ S+ + + IR +P+ + + + +KD
Sbjct: 90 AEEQQDLALLSISTF--QRALKDPNQLIRGSALRVLTSIR-VPM--VAPIMLLAIKDAVR 144
Query: 127 DSNPLIRALAVRTM 140
D +P +R +A +
Sbjct: 145 DMSPYVRKVAAHAI 158
Score = 126 (49.4 bits), Expect = 6.6e-16, Sum P(2) = 6.6e-16
Identities = 30/85 (35%), Positives = 47/85 (55%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ F + +D N LIR A+R + IRV + + ++ ++D PYVRK AA +
Sbjct: 100 SISTFQRALKDPNQLIRGSALRVLTSIRVPMVAPIMLLAIKDAVRDMSPYVRKVAAHAIP 159
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSD 201
KLY + +L E Q +D + LL+D
Sbjct: 160 KLYSLEPEL-EPQ-LVDCIDFLLAD 182
Score = 98 (39.6 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
Identities = 52/233 (22%), Positives = 100/233 (42%)
Query: 281 STLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVF---FVKYNDPIYV 337
S+L KKL ++T L SE V ++ LR + V D+ ++ V+
Sbjct: 347 SSLVKKLKLHVLTSLVSEANV-HIILRELQTYVHMS-DLASPAVEAIGRCAVRVGAVSDQ 404
Query: 338 KLEKLDIMIRLASQANIAQVLSELKEYA-TEVDVDFVRKAVRAIGRCAIKVEQSAERCVS 396
+ L +I + + + + +K ++ + + +R + + A CV
Sbjct: 405 CMTGLVQLISSSDEKVVCSAVVVIKRLLHASAPLNLLSRLMRLMPNM---IAAQARACV- 460
Query: 397 TLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQ 456
+ L+ T + + A + L + F EN V+L+ L VKL+L + D++++VQ
Sbjct: 461 --IWLVATHVEQVLHMAPDFLRLIAKKFSTENELVKLEALKLAVKLWLVKRDDSEKIVQY 518
Query: 457 VLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSA 509
V LA D D+RDR L+ NT + H+ + ++ + +S+
Sbjct: 519 VFQLARFDLSY-DVRDRCRFLRNLMF--NTEILSQHMEEIFMSKKPAPELISS 568
Score = 72 (30.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 32/133 (24%), Positives = 63/133 (47%)
Query: 739 STLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLE 798
S+L KKL ++T L SE V ++ LR + V D+ ++ V +
Sbjct: 347 SSLVKKLKLHVLTSLVSEANV-HIILRELQTYVHMS-DLASPAVEAIGRCAVRVGAVSDQ 404
Query: 799 KLDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARA 858
+ +++L S ++ VV A+VVIK + + + ++S L + + +ARA
Sbjct: 405 CMTGLVQLISSSD----EKVVCSAVVVIKRLL--HASAPLNLLSRLMRLMPNMIAAQARA 458
Query: 859 SMIWIIGEYAERI 871
+IW++ + E++
Sbjct: 459 CVIWLVATHVEQV 471
Score = 54 (24.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 52/249 (20%), Positives = 108/249 (43%)
Query: 524 ELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLC 583
+LK V L++ A H + + + T+V + ++P + A+ R +RV +++
Sbjct: 352 KLKLHVLTSLVSEANVH--IILRELQTYVHMSDLASPAVEAIG-RC--AVRVGAVSDQCM 406
Query: 584 EPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAA 643
L + + D V +A V + +L +A L L +L L+ + M+ A A A
Sbjct: 407 TGLVQLISSSDEKVVCSAVVVIKRLLHASAPL----NLLSRLMRLMPN---MIAAQARAC 459
Query: 644 LSEMNEASTSGVALIEMN-AQTINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSIC 702
+ + V + + + I K + NE + + + L + K D +++ I
Sbjct: 460 VIWLVATHVEQVLHMAPDFLRLIAKKFSTENELVKLEALKLAVKL--WLVKRD-DSEKIV 516
Query: 703 ERITPRLAHANAAV-VLSAVKVLMKLM---EMLPGEGDFVSTLTKKLAPPLVTLLSSEPE 758
+ + +LA + + V + L LM E+L + + ++KK AP L++ +
Sbjct: 517 QYVF-QLARFDLSYDVRDRCRFLRNLMFNTEILSQHMEEIF-MSKKPAPELISSFKERDK 574
Query: 759 VQYVALRNI 767
Q +L ++
Sbjct: 575 FQLGSLSHV 583
Score = 41 (19.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 136 AVRTMG-C-IRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQL 185
AV +G C +RV +++ L + + D V +A V + +L +A L
Sbjct: 387 AVEAIGRCAVRVGAVSDQCMTGLVQLISSSDEKVVCSAVVVIKRLLHASAPL 438
>ASPGD|ASPL0000055849 [details] [associations]
symbol:AN0165 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0006896 "Golgi to
vacuole transport" evidence=IEA] [GO:0006623 "protein targeting to
vacuole" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR026739 InterPro:IPR026740 Pfam:PF01602 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
EMBL:BN001308 PANTHER:PTHR11134 GO:GO:0030123 PANTHER:PTHR11134:SF1
OMA:LLHGHFR EnsemblFungi:CADANIAT00002572 HOGENOM:HOG000175744
Uniprot:C8VQ45
Length = 841
Score = 263 (97.6 bits), Expect = 7.2e-28, Sum P(3) = 7.2e-28
Identities = 66/199 (33%), Positives = 111/199 (55%)
Query: 495 RLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKD 554
R +I+ M + F VV + + NLE+KKLVY+YL+++A++ PD+A++++N K
Sbjct: 62 RRIISLMYRSEPSVPFFSAVVKNVASANLEVKKLVYIYLVHHAEAEPDLALLSINAIQKS 121
Query: 555 CEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 614
D NP RA+A+RTM IRV I + + +++ D P+VRK AA+ + K Y ++
Sbjct: 122 LTDQNPQARAMALRTMASIRVPVINQIVSLAIKRGCGDMSPHVRKAAALAIPKCYRLDPS 181
Query: 615 LVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNE 674
+ Q + ++ LL D+ V AVAA E+ + LI + +++ K L ++E
Sbjct: 182 -TQPQ-LIGYIETLLGDTQYFVAGPAVAAFLEV---CPDRIDLIHKHYRSLVKKLVDMDE 236
Query: 675 CTEWGQVFILDSLSNYSPK 693
WGQ+ L L+ Y+ K
Sbjct: 237 ---WGQLATLRLLTFYARK 252
Score = 171 (65.3 bits), Expect = 8.2e-18, Sum P(3) = 8.2e-18
Identities = 47/150 (31%), Positives = 79/150 (52%)
Query: 290 PLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYV---KLEKLDIMI 346
PLV LL S ++Q++AL NI ++ + P + F V +DP ++ KLE L I+
Sbjct: 337 PLVALLRSPQDMQHIALYNIVVVALRYPKPFTKYVSHFLVHASDPPHIWRLKLEALTILF 396
Query: 347 RLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKY 406
++SEL+ +A D D VR++VRA+GRCA +A++C+ LL+ I +
Sbjct: 397 PHCGNHFKNLIISELEHFAQGADPDLVRESVRALGRCAQGDPNAADKCLRILLNQITSLD 456
Query: 407 AERIDNADELLESFLE---GFHDENTQVQL 433
+ + ++ ++ G H E T +QL
Sbjct: 457 DTLVSESLTVIRHLIQHDPGSH-ERTVIQL 485
Score = 127 (49.8 bits), Expect = 8.2e-18, Sum P(3) = 8.2e-18
Identities = 41/153 (26%), Positives = 77/153 (50%)
Query: 8 TTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKK 67
T+++ + +K L+S I+ M + F VV + + NLE+KK
Sbjct: 35 TSSRDLSVAHIKKLLDSRSDRDVLDGLRRIISLMYRSEPSVPFFSAVVKNVASANLEVKK 94
Query: 68 LVYLYLMNYAKSHPDMAIMAFSTFFYQKS---------SSSFQCMIDIRSIPLFDLCSSV 118
LVY+YL+++A++ PD+A+++ + QKS + + + M IR +P+ + S+
Sbjct: 95 LVYIYLVHHAEAEPDLALLSINAI--QKSLTDQNPQARAMALRTMASIR-VPVINQIVSL 151
Query: 119 GVFVKDCEDSNPLIR-ALAVRTMGCIRVDKITE 150
+ + C D +P +R A A+ C R+D T+
Sbjct: 152 AI-KRGCGDMSPHVRKAAALAIPKCYRLDPSTQ 183
Score = 119 (46.9 bits), Expect = 3.1e-12, Sum P(3) = 3.1e-12
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ K D NP RA+A+RTM IRV I + + +++ D P+VRK AA+ +
Sbjct: 114 SINAIQKSLTDQNPQARAMALRTMASIRVPVINQIVSLAIKRGCGDMSPHVRKAAALAIP 173
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDS 202
K Y ++ + Q + ++ LL D+
Sbjct: 174 KCYRLDPS-TQPQ-LIGYIETLLGDT 197
Score = 100 (40.3 bits), Expect = 7.2e-28, Sum P(3) = 7.2e-28
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 818 VVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYA 868
+V E++ VI+ + + P +E + L + L P+ARA+++W++GEYA
Sbjct: 459 LVSESLTVIRHLIQHDPGSHERTVIQLVKYLGLTTNPDARATIVWLVGEYA 509
Score = 82 (33.9 bits), Expect = 7.2e-28, Sum P(3) = 7.2e-28
Identities = 30/98 (30%), Positives = 48/98 (48%)
Query: 709 LAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNIN 768
L NAAV+++ V+ L P E ++ PLV LL S ++Q++AL NI
Sbjct: 307 LQSRNAAVIVAVVRCYFYLA---PTE--YLGAAVG----PLVALLRSPQDMQHIALYNIV 357
Query: 769 LIVQKRPDILKHEMKVFFVKYNDPIYV---KLEKLDIM 803
++ + P + F V +DP ++ KLE L I+
Sbjct: 358 VVALRYPKPFTKYVSHFLVHASDPPHIWRLKLEALTIL 395
Score = 55 (24.4 bits), Expect = 8.2e-18, Sum P(3) = 8.2e-18
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 449 DTQELV-QQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYI 489
DT L+ + +L LA D+ DLRDR +Y LLS+ ++ I
Sbjct: 605 DTMTLLWRYILLLARYDTSY-DLRDRARLYKALLSSPSSTQI 645
Score = 42 (19.8 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 413 ADELLESFLEGFHDENTQVQLQLLTAIVKLFL 444
A ++L ++ F +E+ V+ Q+L K++L
Sbjct: 518 APDVLRVLVQNFAEESEAVKQQILLLGAKVYL 549
>UNIPROTKB|I3LRS3 [details] [associations]
symbol:I3LRS3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 PIRSF:PIRSF037096 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 GeneTree:ENSGT00530000063546 GO:GO:0030123
PANTHER:PTHR11134:SF1 Ensembl:ENSSSCT00000024280 OMA:ESADSXT
Uniprot:I3LRS3
Length = 995
Score = 316 (116.3 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 95/340 (27%), Positives = 165/340 (48%)
Query: 480 LLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKS 539
+L T N + L + ++A + GK+ S LFP VV + N+E+KKLVY+YL+ YA+
Sbjct: 8 MLDT-NKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEE 66
Query: 540 HPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRK 599
D+A+++++TF + +D N LIRA A+R + IRV I + +++ D PYVRK
Sbjct: 67 QQDLALLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRK 126
Query: 600 TAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIE 659
TAA + KLY +++ +DQ ++ ++ LL+D +V + V A E+ + LI
Sbjct: 127 TAAHAIPKLYSLDSDQ-KDQ-LIEVIEKLLADKTTLVAGSVVMAFEEV---CPERIDLIH 181
Query: 660 MNAQTINKLLTALNECTEWGQVFILDSLSNYSPKD---DREAQSICERITPRLAHANAAV 716
N + + LL + V I+ L+ Y+ + +S+ E + + +
Sbjct: 182 KNYRKLCNLLIDVX-------VVIISMLTRYARTQFLSPTQNESLLEENPEKAFYGSEED 234
Query: 717 VLSAVKVLMKLMEMLPGEGDFVSTLTKKL-APPLVTLLSSEPEVQYVALRNINLIVQKRP 775
L G L + L +P P + VA +I KR
Sbjct: 235 EAKGPGFYFHLAPKAE-VGVIAKALVRLLRSPRCAPGALPAPVLSXVATMSI-----KRR 288
Query: 776 DILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQV 815
+ + +K F+++ DP +K+ KL+++ LA++ NI V
Sbjct: 289 GMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPTV 328
Score = 167 (63.8 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 30/91 (32%), Positives = 55/91 (60%)
Query: 315 KRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVR 374
KR + + +K F+++ DP +K+ KL+++ LA++ NI VL E + Y +D DFV
Sbjct: 286 KRRGMFEPYLKSFYIRSTDPTQIKILKLEVLTNLANETNIPTVLREFQTYIRSMDKDFVA 345
Query: 375 KAVRAIGRCAIKVEQSAERCVSTLLDLIQTK 405
++AIGRCA + + + C++ L+ L+ +
Sbjct: 346 ATIQAIGRCATNIGRVRDTCLNGLVQLLSNR 376
Score = 138 (53.6 bits), Expect = 1.5e-19, Sum P(3) = 1.5e-19
Identities = 46/164 (28%), Positives = 84/164 (51%)
Query: 17 ELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNY 76
+LK L+++ +A + GK+ S LFP VV + N+E+KKLVY+YL+ Y
Sbjct: 4 DLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRY 63
Query: 77 AKSHPDMAIMAFSTFFYQKS---------SSSFQCMIDIRSIPLFDLCSSVGVFVKDC-E 126
A+ D+A+++ STF Q+ +S+ + + IR +P+ + + + +K+
Sbjct: 64 AEEQQDLALLSISTF--QRGLKDPNQLIRASALRVLSSIR-VPI--IVPIMMLAIKEAAS 118
Query: 127 DSNPLIR---ALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYV 167
D +P +R A A+ + + D+ + L E + K L D+ V
Sbjct: 119 DMSPYVRKTAAHAIPKLYSLDSDQ-KDQLIEVIEKLLADKTTLV 161
Score = 136 (52.9 bits), Expect = 2.3e-19, Sum P(3) = 2.3e-19
Identities = 31/89 (34%), Positives = 51/89 (57%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ F + +D N LIRA A+R + IRV I + +++ D PYVRKTAA +
Sbjct: 74 SISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIP 133
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KLY +++ +DQ ++ ++ LL+D +
Sbjct: 134 KLYSLDSDQ-KDQ-LIEVIEKLLADKTTL 160
Score = 68 (29.0 bits), Expect = 2.9e-26, Sum P(2) = 2.9e-26
Identities = 16/54 (29%), Positives = 31/54 (57%)
Query: 818 VVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIW-IIGEYAER 870
VV E++VVIK + + P ++ II L + D + A+ +++W ++ Y+ R
Sbjct: 380 VVAESVVVIKKLLQMQPAQHGEIIKHLAKLTDNIQVMMAQRAVVWRLVPMYSCR 433
Score = 53 (23.7 bits), Expect = 5.1e-18, Sum P(3) = 5.1e-18
Identities = 14/24 (58%), Positives = 16/24 (66%)
Query: 450 TQELVQQVLSLATQDSDNPDLRDR 473
T+ L Q VLSLA D N D+RDR
Sbjct: 477 TKLLTQYVLSLAKYDQ-NYDIRDR 499
Score = 53 (23.7 bits), Expect = 5.1e-18, Sum P(3) = 5.1e-18
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 709 LAHANAAVVLSAVKVLMKLMEMLPGE-GDFVSTLTK 743
L++ + VV +V V+ KL++M P + G+ + L K
Sbjct: 373 LSNRDELVVAESVVVIKKLLQMQPAQHGEIIKHLAK 408
Score = 48 (22.0 bits), Expect = 2.4e-07, Sum P(3) = 2.4e-07
Identities = 16/67 (23%), Positives = 28/67 (41%)
Query: 431 VQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYIL 490
V + +LT + PT + L+++ A S+ + + GF Y+ L I
Sbjct: 197 VIISMLTRYARTQFLSPTQNESLLEENPEKAFYGSEEDEAKGPGF-YFHLAPKAEVGVIA 255
Query: 491 LHLTRLV 497
L RL+
Sbjct: 256 KALVRLL 262
Score = 41 (19.5 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 9/26 (34%), Positives = 17/26 (65%)
Query: 622 LDQLKDLLSDSNPMVVANAVAALSEM 647
L+ L LLS+ + +VVA +V + ++
Sbjct: 366 LNGLVQLLSNRDELVVAESVVVIKKL 391
>UNIPROTKB|B1ALD1 [details] [associations]
symbol:AP4B1 "AP-4 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
Pfam:PF01602 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 PANTHER:PTHR11134
EMBL:AL137856 UniGene:Hs.515048 HGNC:HGNC:572 HOGENOM:HOG000294128
IPI:IPI00515080 SMR:B1ALD1 STRING:B1ALD1 Ensembl:ENST00000369564
HOVERGEN:HBG106066 Uniprot:B1ALD1
Length = 296
Score = 306 (112.8 bits), Expect = 3.6e-26, P = 3.6e-26
Identities = 81/281 (28%), Positives = 146/281 (51%)
Query: 543 MAIMAVNTFVKDCEDS--NPLIRA--LAVRTM--GCIRVDKITEYLCEPLRKCLKDEDPY 596
M + VK+ + + NP I+A L R + IR+ + EY+ +P+ L+D+ Y
Sbjct: 1 MPYLGSEDVVKELKKALCNPHIQADRLRYRNVIQRVIRMPGVQEYIQQPILNGLRDKASY 60
Query: 597 VRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVA 656
VR+ A + AK+++++ D +++L LL D +P+VV N + +L E+ + GV
Sbjct: 61 VRRVAVLGCAKMHNLHGDSEVDGALVNELYSLLRDQDPIVVVNCLRSLEEILKQE-GGVV 119
Query: 657 LIEMNAQTINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAV 716
+ N + LL +++ +WGQ +L+ L Y P+ + E I + L ++ V
Sbjct: 120 I---NKPIAHHLLNRMSKLDQWGQAEVLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGV 176
Query: 717 VLSAVKVLMKLMEMLPGEGDFVST-LTKKLAPPLVTLLSSEP-EVQYVALRNINLIVQKR 774
V+ A K+ + L +M P V T + ++ PL+ SSE E+ +VAL ++ I+
Sbjct: 177 VMGATKLFLILAKMFP----HVQTDVLVRVKGPLLAACSSESRELCFVALCHVRQILHSL 232
Query: 775 PDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQV 815
P K FF Y++P Y+KL+K++++ L + N+ QV
Sbjct: 233 PGHFSSHYKKFFCSYSEPHYIKLQKVEVLCELVNDENVQQV 273
Score = 171 (65.3 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 35/92 (38%), Positives = 55/92 (59%)
Query: 290 PLVTLLSSEP-EVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRL 348
PL+ SSE E+ +VAL ++ I+ P K FF Y++P Y+KL+K++++ L
Sbjct: 205 PLLAACSSESRELCFVALCHVRQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCEL 264
Query: 349 ASQANIAQVLSELKEYATEVDVDFVRKAVRAI 380
+ N+ QVL EL+ Y T+V DF + A+ AI
Sbjct: 265 VNDENVQQVLEELRGYCTDVSADFAQAAIFAI 296
Score = 100 (40.3 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 25/81 (30%), Positives = 46/81 (56%)
Query: 129 NPLIRA--LAVRTM--GCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 184
NP I+A L R + IR+ + EY+ +P+ L+D+ YVR+ A + AK+++++
Sbjct: 19 NPHIQADRLRYRNVIQRVIRMPGVQEYIQQPILNGLRDKASYVRRVAVLGCAKMHNLHGD 78
Query: 185 LVEDQGFLDQLKDLLSDSNPM 205
D +++L LL D +P+
Sbjct: 79 SEVDGALVNELYSLLRDQDPI 99
>UNIPROTKB|K7EJX1 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
Pfam:PF01602 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PANTHER:PTHR11134 EMBL:AC006237 HGNC:HGNC:563 EMBL:AC015911
EMBL:AC004134 Ensembl:ENST00000590432 Uniprot:K7EJX1
Length = 80
Score = 306 (112.8 bits), Expect = 3.6e-26, P = 3.6e-26
Identities = 61/79 (77%), Positives = 65/79 (82%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQT 60
MTDSKYFTT KKGEIFELK ELN++ IA+MTVGKDVS+LFPDVVNCMQT
Sbjct: 1 MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQT 60
Query: 61 DNLELKKLVYLYLMNYAKS 79
DNLELKKLVYLYLMNYAKS
Sbjct: 61 DNLELKKLVYLYLMNYAKS 79
Score = 210 (79.0 bits), Expect = 6.9e-16, P = 6.9e-16
Identities = 41/43 (95%), Positives = 43/43 (100%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKS 539
VIA+MTVGKDVS+LFPDVVNCMQTDNLELKKLVYLYLMNYAKS
Sbjct: 37 VIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKS 79
>UNIPROTKB|F5GWU4 [details] [associations]
symbol:AP3B2 "AP-3 complex subunit beta-2" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030123 "AP-3 adaptor complex" evidence=IEA]
[GO:0008089 "anterograde axon cargo transport" evidence=IEA]
[GO:0048490 "anterograde synaptic vesicle transport" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
InterPro:IPR026740 Pfam:PF01602 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
PANTHER:PTHR11134 GO:GO:0030123 PANTHER:PTHR11134:SF1 HGNC:HGNC:567
EMBL:AC105339 EMBL:FJ695193 IPI:IPI01012451
ProteinModelPortal:F5GWU4 SMR:F5GWU4 Ensembl:ENST00000541693
ArrayExpress:F5GWU4 Bgee:F5GWU4 Uniprot:F5GWU4
Length = 193
Score = 301 (111.0 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 72/202 (35%), Positives = 115/202 (56%)
Query: 480 LLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKS 539
+L T N + L + ++A + GK+ S LFP VV + N+E+KKLVY+YL+ YA+
Sbjct: 1 MLDT-NKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEE 59
Query: 540 HPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRK 599
D+A+++++TF + +D N LIRA A+R + IRV I + +++ D PYVRK
Sbjct: 60 QQDLALLSISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRK 119
Query: 600 TAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIE 659
TAA + KLY +++ +DQ ++ ++ LL+D +V + V A E+ + LI
Sbjct: 120 TAAHAIPKLYSLDSDQ-KDQ-LIEVIEKLLADKTTLVAGSVVMAFEEV---CPERIDLIH 174
Query: 660 MNAQTINKLLTALNECTEWGQV 681
N + KL L + EWGQV
Sbjct: 175 KNYR---KLCNLLIDVEEWGQV 193
Score = 136 (52.9 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 31/89 (34%), Positives = 51/89 (57%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ F + +D N LIRA A+R + IRV I + +++ D PYVRKTAA +
Sbjct: 67 SISTFQRGLKDPNQLIRASALRVLSSIRVPIIVPIMMLAIKEAASDMSPYVRKTAAHAIP 126
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
KLY +++ +DQ ++ ++ LL+D +
Sbjct: 127 KLYSLDSDQ-KDQ-LIEVIEKLLADKTTL 153
Score = 134 (52.2 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 43/143 (30%), Positives = 77/143 (53%)
Query: 38 IASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQKS- 96
+A + GK+ S LFP VV + N+E+KKLVY+YL+ YA+ D+A+++ STF Q+
Sbjct: 18 VAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTF--QRGL 75
Query: 97 --------SSSFQCMIDIRSIPLFDLCSSVGVFVKDC-EDSNPLIR---ALAVRTMGCIR 144
+S+ + + IR +P+ + + + +K+ D +P +R A A+ + +
Sbjct: 76 KDPNQLIRASALRVLSSIR-VPI--IVPIMMLAIKEAASDMSPYVRKTAAHAIPKLYSLD 132
Query: 145 VDKITEYLCEPLRKCLKDEDPYV 167
D+ + L E + K L D+ V
Sbjct: 133 SDQ-KDQLIEVIEKLLADKTTLV 154
>CGD|CAL0003756 [details] [associations]
symbol:orf19.1323 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006896
"Golgi to vacuole transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 CGD:CAL0003756 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 eggNOG:COG5096
PANTHER:PTHR11134 GO:GO:0030123 PANTHER:PTHR11134:SF1
EMBL:AACQ01000139 EMBL:AACQ01000138 RefSeq:XP_709962.1
RefSeq:XP_712999.1 ProteinModelPortal:Q59TL3 STRING:Q59TL3
GeneID:3645373 GeneID:3645401 KEGG:cal:CaO19.1323
KEGG:cal:CaO19.8903 Uniprot:Q59TL3
Length = 771
Score = 281 (104.0 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 99/383 (25%), Positives = 183/383 (47%)
Query: 454 VQQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPD 513
++ +S + + +D P R +LL++ T +L+ + VI+ +T +D F D
Sbjct: 20 IETAVSASARLTDTPS-GSRPQEISKLLNS-RTDREILNGMKCVISLITREEDALPYFAD 77
Query: 514 VVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCI 573
VV + + ++++LV +YL YA+ PD A++++N+ K D +P+ RA A+R++ I
Sbjct: 78 VVKNITNSDPKIRQLVIIYLTKYAEVEPDTALLSINSIQKSLNDKDPINRANAIRSLAGI 137
Query: 574 RVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSN 633
R+ I L +++ D P VR A+ + K+Y I+ + + ++ L LL+DS
Sbjct: 138 RIGSIIPILVLSMKRTSTDRSPLVRAATAISIGKIYQISGR--SKRQMIEYLSKLLTDSE 195
Query: 634 PMVVANAVAALS----EMNEASTSGVALIEMNAQTINKLLTALNECTEWGQVFILDSLSN 689
MVV A+ + E+NE I N + KLL N+ EW Q ++++ L+
Sbjct: 196 VMVVGAAIKTYAKIRMELNEEKRW--TPIHGNFRRFCKLL---NQFDEWTQSYVVELLTE 250
Query: 690 YSPK----------DDREAQSICERITPRLAHANAAVVLSAVKVLMKLM-EMLPGEGDFV 738
YS K D + + + P + + +V+LS K + L L +
Sbjct: 251 YSRKFLLRPINDEITDDDLELFLRSMKPLVQSISESVILSVAKSIYLLAPRQLFCDFQLD 310
Query: 739 STLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLE 798
LT+ + T L+ + +V AL ++ I K + + K F+V +D V +
Sbjct: 311 LVLTR-----IATSLN-QSDVSLFALEVVSFI-SKSDKLFESYYKSFYVTPSDSNDVAIC 363
Query: 799 KLDIMIRLASQANIAQVNYVVQE 821
K++I+ L++Q N Y+ +E
Sbjct: 364 KINILSALSNQENF---KYIFEE 383
Score = 115 (45.5 bits), Expect = 6.0e-12, Sum P(3) = 6.0e-12
Identities = 26/89 (29%), Positives = 45/89 (50%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ K D +P+ RA A+R++ IR+ I L +++ D P VR A+ +
Sbjct: 111 SINSIQKSLNDKDPINRANAIRSLAGIRIGSIIPILVLSMKRTSTDRSPLVRAATAISIG 170
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
K+Y I+ + + ++ L LL+DS M
Sbjct: 171 KIYQISGR--SKRQMIEYLSKLLTDSEVM 197
Score = 108 (43.1 bits), Expect = 3.3e-11, Sum P(3) = 3.3e-11
Identities = 45/178 (25%), Positives = 81/178 (45%)
Query: 17 ELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNY 76
E+ LNS I+ +T +D F DVV + + ++++LV +YL Y
Sbjct: 41 EISKLLNSRTDREILNGMKCVISLITREEDALPYFADVVKNITNSDPKIRQLVIIYLTKY 100
Query: 77 AKSHPDMAIMAFSTFFYQKSSSS---FQCMIDIRSIPLFDLCSSVGVFV----KDCEDSN 129
A+ PD A+++ ++ QKS + IRS+ + S + + V + D +
Sbjct: 101 AEVEPDTALLSINSI--QKSLNDKDPINRANAIRSLAGIRIGSIIPILVLSMKRTSTDRS 158
Query: 130 PLIRALAVRTMGCI-RVD-KITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL-YDINAQ 184
PL+RA ++G I ++ + + E L K L D + V A AK+ ++N +
Sbjct: 159 PLVRAATAISIGKIYQISGRSKRQMIEYLSKLLTDSEVMVVGAAIKTYAKIRMELNEE 216
Score = 107 (42.7 bits), Expect = 6.0e-12, Sum P(3) = 6.0e-12
Identities = 31/134 (23%), Positives = 68/134 (50%)
Query: 297 SEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQ 356
++ +V AL ++ I K + + K F+V +D V + K++I+ L++Q N
Sbjct: 321 NQSDVSLFALEVVSFI-SKSDKLFESYYKSFYVTPSDSNDVAICKINILSALSNQENFKY 379
Query: 357 VLSELKEYAT-EVDVDFVRKAVRAIGRCA-IKVEQSAERCVSTLLDLIQTKYAERIDNAD 414
+ ELK YA + +++++A+G+C+ + +E S ++ + L I+T E ++
Sbjct: 380 IFEELKYYAIYSTNKSISKESIKAMGKCSGLSLEWS-QKILKWCLKKIKTSRGETLNELL 438
Query: 415 ELLESFLEGFHDEN 428
++ ++ D N
Sbjct: 439 TVVRYLIQQKSDSN 452
Score = 75 (31.5 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 841 ISTLCENLDTLDEPEARASMIWIIGEYAERIDN--ADELLESFLE 883
++ + E+ E EARAS+IWIIGEY +N A ++L + L+
Sbjct: 467 LAAILEDSSVELETEARASIIWIIGEYTALAENSFALDVLRNLLK 511
Score = 58 (25.5 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 72/360 (20%), Positives = 147/360 (40%)
Query: 356 QVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKYAERIDNADE 415
Q++ L + T+ +V V A++ + I++E + E+ + + + ++ + ++ DE
Sbjct: 182 QMIEYLSKLLTDSEVMVVGAAIKTYAK--IRMELNEEKRWTPIHGNFR-RFCKLLNQFDE 238
Query: 416 LLESFLEGFHDENTQVQLQLLTAIVKLFLKRP-----TDTQ-EL-VQQVLSLATQDSDNP 468
+S++ ++LLT + FL RP TD EL ++ + L S++
Sbjct: 239 WTQSYV-----------VELLTEYSRKFLLRPINDEITDDDLELFLRSMKPLVQSISESV 287
Query: 469 DLRDRGFIYWRLLSTGNTFY-ILLHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKK 527
L IY LL+ F L L IA+ DVS +VV+ + + +
Sbjct: 288 ILSVAKSIY--LLAPRQLFCDFQLDLVLTRIATSLNQSDVSLFALEVVSFISKSDKLFES 345
Query: 528 LVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDK-ITEYLCEPL 586
+ + + S+ D+AI +N N ++ +K I++ + +
Sbjct: 346 YYKSFYVTPSDSN-DVAICKINILSALSNQENFKYIFEELKYYAIYSTNKSISKESIKAM 404
Query: 587 RKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLL---SDSNPMVVANAVAA 643
KC + +K C+ K+ + + + L ++ L+ SDSN + N
Sbjct: 405 GKCSGLSLEWSQKILKWCLKKIKTSRGETLNE--LLTVVRYLIQQKSDSNDSL--NKAEV 460
Query: 644 L-SEMNEASTSGVALIEMNAQTINKLLTALNECTEWGQ-VFILDSLSNYSPKDDREAQSI 701
L + N A+ + +E+ + ++ + E T + F LD L N + E + +
Sbjct: 461 LKTTFNLAAILEDSSVELETEARASIIWIIGEYTALAENSFALDVLRNLLKQFAEEEEEV 520
>UNIPROTKB|Q59TL3 [details] [associations]
symbol:APL6 "Potential clathrin-associated protein AP-3
complex component" species:237561 "Candida albicans SC5314"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR026739 InterPro:IPR026740
Pfam:PF01602 CGD:CAL0003756 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 eggNOG:COG5096
PANTHER:PTHR11134 GO:GO:0030123 PANTHER:PTHR11134:SF1
EMBL:AACQ01000139 EMBL:AACQ01000138 RefSeq:XP_709962.1
RefSeq:XP_712999.1 ProteinModelPortal:Q59TL3 STRING:Q59TL3
GeneID:3645373 GeneID:3645401 KEGG:cal:CaO19.1323
KEGG:cal:CaO19.8903 Uniprot:Q59TL3
Length = 771
Score = 281 (104.0 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 99/383 (25%), Positives = 183/383 (47%)
Query: 454 VQQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPD 513
++ +S + + +D P R +LL++ T +L+ + VI+ +T +D F D
Sbjct: 20 IETAVSASARLTDTPS-GSRPQEISKLLNS-RTDREILNGMKCVISLITREEDALPYFAD 77
Query: 514 VVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCI 573
VV + + ++++LV +YL YA+ PD A++++N+ K D +P+ RA A+R++ I
Sbjct: 78 VVKNITNSDPKIRQLVIIYLTKYAEVEPDTALLSINSIQKSLNDKDPINRANAIRSLAGI 137
Query: 574 RVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSN 633
R+ I L +++ D P VR A+ + K+Y I+ + + ++ L LL+DS
Sbjct: 138 RIGSIIPILVLSMKRTSTDRSPLVRAATAISIGKIYQISGR--SKRQMIEYLSKLLTDSE 195
Query: 634 PMVVANAVAALS----EMNEASTSGVALIEMNAQTINKLLTALNECTEWGQVFILDSLSN 689
MVV A+ + E+NE I N + KLL N+ EW Q ++++ L+
Sbjct: 196 VMVVGAAIKTYAKIRMELNEEKRW--TPIHGNFRRFCKLL---NQFDEWTQSYVVELLTE 250
Query: 690 YSPK----------DDREAQSICERITPRLAHANAAVVLSAVKVLMKLM-EMLPGEGDFV 738
YS K D + + + P + + +V+LS K + L L +
Sbjct: 251 YSRKFLLRPINDEITDDDLELFLRSMKPLVQSISESVILSVAKSIYLLAPRQLFCDFQLD 310
Query: 739 STLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLE 798
LT+ + T L+ + +V AL ++ I K + + K F+V +D V +
Sbjct: 311 LVLTR-----IATSLN-QSDVSLFALEVVSFI-SKSDKLFESYYKSFYVTPSDSNDVAIC 363
Query: 799 KLDIMIRLASQANIAQVNYVVQE 821
K++I+ L++Q N Y+ +E
Sbjct: 364 KINILSALSNQENF---KYIFEE 383
Score = 115 (45.5 bits), Expect = 6.0e-12, Sum P(3) = 6.0e-12
Identities = 26/89 (29%), Positives = 45/89 (50%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ K D +P+ RA A+R++ IR+ I L +++ D P VR A+ +
Sbjct: 111 SINSIQKSLNDKDPINRANAIRSLAGIRIGSIIPILVLSMKRTSTDRSPLVRAATAISIG 170
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPM 205
K+Y I+ + + ++ L LL+DS M
Sbjct: 171 KIYQISGR--SKRQMIEYLSKLLTDSEVM 197
Score = 108 (43.1 bits), Expect = 3.3e-11, Sum P(3) = 3.3e-11
Identities = 45/178 (25%), Positives = 81/178 (45%)
Query: 17 ELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNY 76
E+ LNS I+ +T +D F DVV + + ++++LV +YL Y
Sbjct: 41 EISKLLNSRTDREILNGMKCVISLITREEDALPYFADVVKNITNSDPKIRQLVIIYLTKY 100
Query: 77 AKSHPDMAIMAFSTFFYQKSSSS---FQCMIDIRSIPLFDLCSSVGVFV----KDCEDSN 129
A+ PD A+++ ++ QKS + IRS+ + S + + V + D +
Sbjct: 101 AEVEPDTALLSINSI--QKSLNDKDPINRANAIRSLAGIRIGSIIPILVLSMKRTSTDRS 158
Query: 130 PLIRALAVRTMGCI-RVD-KITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL-YDINAQ 184
PL+RA ++G I ++ + + E L K L D + V A AK+ ++N +
Sbjct: 159 PLVRAATAISIGKIYQISGRSKRQMIEYLSKLLTDSEVMVVGAAIKTYAKIRMELNEE 216
Score = 107 (42.7 bits), Expect = 6.0e-12, Sum P(3) = 6.0e-12
Identities = 31/134 (23%), Positives = 68/134 (50%)
Query: 297 SEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQ 356
++ +V AL ++ I K + + K F+V +D V + K++I+ L++Q N
Sbjct: 321 NQSDVSLFALEVVSFI-SKSDKLFESYYKSFYVTPSDSNDVAICKINILSALSNQENFKY 379
Query: 357 VLSELKEYAT-EVDVDFVRKAVRAIGRCA-IKVEQSAERCVSTLLDLIQTKYAERIDNAD 414
+ ELK YA + +++++A+G+C+ + +E S ++ + L I+T E ++
Sbjct: 380 IFEELKYYAIYSTNKSISKESIKAMGKCSGLSLEWS-QKILKWCLKKIKTSRGETLNELL 438
Query: 415 ELLESFLEGFHDEN 428
++ ++ D N
Sbjct: 439 TVVRYLIQQKSDSN 452
Score = 75 (31.5 bits), Expect = 1.5e-23, Sum P(2) = 1.5e-23
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 841 ISTLCENLDTLDEPEARASMIWIIGEYAERIDN--ADELLESFLE 883
++ + E+ E EARAS+IWIIGEY +N A ++L + L+
Sbjct: 467 LAAILEDSSVELETEARASIIWIIGEYTALAENSFALDVLRNLLK 511
Score = 58 (25.5 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 72/360 (20%), Positives = 147/360 (40%)
Query: 356 QVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKYAERIDNADE 415
Q++ L + T+ +V V A++ + I++E + E+ + + + ++ + ++ DE
Sbjct: 182 QMIEYLSKLLTDSEVMVVGAAIKTYAK--IRMELNEEKRWTPIHGNFR-RFCKLLNQFDE 238
Query: 416 LLESFLEGFHDENTQVQLQLLTAIVKLFLKRP-----TDTQ-EL-VQQVLSLATQDSDNP 468
+S++ ++LLT + FL RP TD EL ++ + L S++
Sbjct: 239 WTQSYV-----------VELLTEYSRKFLLRPINDEITDDDLELFLRSMKPLVQSISESV 287
Query: 469 DLRDRGFIYWRLLSTGNTFY-ILLHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKK 527
L IY LL+ F L L IA+ DVS +VV+ + + +
Sbjct: 288 ILSVAKSIY--LLAPRQLFCDFQLDLVLTRIATSLNQSDVSLFALEVVSFISKSDKLFES 345
Query: 528 LVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDK-ITEYLCEPL 586
+ + + S+ D+AI +N N ++ +K I++ + +
Sbjct: 346 YYKSFYVTPSDSN-DVAICKINILSALSNQENFKYIFEELKYYAIYSTNKSISKESIKAM 404
Query: 587 RKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLL---SDSNPMVVANAVAA 643
KC + +K C+ K+ + + + L ++ L+ SDSN + N
Sbjct: 405 GKCSGLSLEWSQKILKWCLKKIKTSRGETLNE--LLTVVRYLIQQKSDSNDSL--NKAEV 460
Query: 644 L-SEMNEASTSGVALIEMNAQTINKLLTALNECTEWGQ-VFILDSLSNYSPKDDREAQSI 701
L + N A+ + +E+ + ++ + E T + F LD L N + E + +
Sbjct: 461 LKTTFNLAAILEDSSVELETEARASIIWIIGEYTALAENSFALDVLRNLLKQFAEEEEEV 520
>UNIPROTKB|D4A3Q4 [details] [associations]
symbol:Ap4b1 "Protein Ap4b1" species:10116 "Rattus
norvegicus" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR002553 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 RGD:1310529 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030131 PANTHER:PTHR11134 IPI:IPI00951398
Ensembl:ENSRNOT00000066724 ArrayExpress:D4A3Q4 Uniprot:D4A3Q4
Length = 664
Score = 300 (110.7 bits), Expect = 4.1e-23, P = 4.1e-23
Identities = 93/356 (26%), Positives = 173/356 (48%)
Query: 543 MAIMAVNTFVKDCEDS--NPLIRA--LAVRTM--GCIRVDKITEYLCEPLRKCLKDEDPY 596
M + VK+ + + NP I+A L R + IR+ + EY+ +P+ L+D+ Y
Sbjct: 1 MPYLGSEDVVKELKKALCNPHIQADRLRYRNVIQRVIRMPGVQEYIQQPVVNGLRDKASY 60
Query: 597 VRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVA 656
VR+ A + AK+++++ D +++L LL D +P+VV N + +L E+ + GV
Sbjct: 61 VRRVAVLGCAKMHNLHGDSEVDGALVNELYSLLRDQDPIVVVNCLRSLEEILKQE-GGVV 119
Query: 657 LIEMNAQTINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAV 716
+ N + LL +++ +WGQ +L+ L Y P+ + E I + L ++ V
Sbjct: 120 I---NKPIAHHLLNRMSKLDQWGQAEVLNFLLRYQPRSEEELFDILNLLDSYLKSSSTGV 176
Query: 717 VLSAVKVLMKLMEMLPGEGDFVST-LTKKLAPPLVTLLSSEP-EVQYVALRNINLIVQKR 774
V+ A K+ + L + P V T + ++ PL+ SSE E+ + AL ++ ++
Sbjct: 177 VMGATKLFLILAKKFP----HVQTDVLVRVKGPLLAACSSESRELCFAALCHVRQVLHSL 232
Query: 775 PDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQV-----NYVV-------QEA 822
P K FF Y++P Y+KL+K++++ L + N+ QV Y Q A
Sbjct: 233 PGHFSSHYKKFFCSYSEPHYIKLQKVEVLCELVNDENVQQVLEELRGYCTDVSADFAQAA 292
Query: 823 IVVIKDIFRKYPNKYETIISTLC----ENLDTLDEPEARASMIWIIGEYAERIDNA 874
I I +I + Y ++ I++ L E++ T+ R ++W+ + E + A
Sbjct: 293 IFAIGNIAKTYTDQCVQILTELLGLRQEHITTVVVQTFR-DLVWLCPQCTEAVCQA 347
Score = 186 (70.5 bits), Expect = 2.7e-20, Sum P(3) = 2.7e-20
Identities = 39/114 (34%), Positives = 65/114 (57%)
Query: 290 PLVTLLSSEP-EVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRL 348
PL+ SSE E+ + AL ++ ++ P K FF Y++P Y+KL+K++++ L
Sbjct: 205 PLLAACSSESRELCFAALCHVRQVLHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCEL 264
Query: 349 ASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI 402
+ N+ QVL EL+ Y T+V DF + A+ AIG A + ++CV L +L+
Sbjct: 265 VNDENVQQVLEELRGYCTDVSADFAQAAIFAIGNIA---KTYTDQCVQILTELL 315
Score = 163 (62.4 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 47/142 (33%), Positives = 75/142 (52%)
Query: 356 QVLSEL----KEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLD------LIQTK 405
Q+L+EL +E+ T V V R V +C V Q+ C + D LI
Sbjct: 309 QILTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCEENIQDSEGKQALIWLL 368
Query: 406 --YAERIDNADELLESFLEGFHDEN-TQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLAT 462
+ E+I NA +LE F+E E V+++LLTA+++LFL RP + Q+++ ++L
Sbjct: 369 GVHGEKIPNAPYVLEDFVESVKSETFPAVKMELLTALMRLFLSRPAECQDVLGRLLLYCI 428
Query: 463 QDSDNPDLRDRGFIYWRLLSTG 484
++ + +RDRG Y+RLL G
Sbjct: 429 EEEKDMAVRDRGLFYYRLLLVG 450
Score = 98 (39.6 bits), Expect = 2.7e-20, Sum P(3) = 2.7e-20
Identities = 25/81 (30%), Positives = 46/81 (56%)
Query: 129 NPLIRA--LAVRTM--GCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 184
NP I+A L R + IR+ + EY+ +P+ L+D+ YVR+ A + AK+++++
Sbjct: 19 NPHIQADRLRYRNVIQRVIRMPGVQEYIQQPVVNGLRDKASYVRRVAVLGCAKMHNLHGD 78
Query: 185 LVEDQGFLDQLKDLLSDSNPM 205
D +++L LL D +P+
Sbjct: 79 SEVDGALVNELYSLLRDQDPI 99
Score = 88 (36.0 bits), Expect = 2.7e-20, Sum P(3) = 2.7e-20
Identities = 18/69 (26%), Positives = 36/69 (52%)
Query: 817 YVVQEAIVVIKDIFRKYPNKYETIISTL--CENLDTLDEPEARASMIWIIGEYAERIDNA 874
++ + +D+ P E + L CE + + + E + ++IW++G + E+I NA
Sbjct: 321 HITTVVVQTFRDLVWLCPQCTEAVCQALPGCE--ENIQDSEGKQALIWLLGVHGEKIPNA 378
Query: 875 DELLESFLE 883
+LE F+E
Sbjct: 379 PYVLEDFVE 387
Score = 40 (19.1 bits), Expect = 5.7e-05, Sum P(3) = 5.7e-05
Identities = 21/85 (24%), Positives = 36/85 (42%)
Query: 386 KVEQSAERCVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLK 445
K++Q + V L Q + E + + LL+S+L+ +L + K F
Sbjct: 134 KLDQWGQAEVLNFLLRYQPRSEEELFDILNLLDSYLKSSSTGVVMGATKLFLILAKKFPH 193
Query: 446 RPTDTQELVQQVLSLATQDSDNPDL 470
TD V+ L LA S++ +L
Sbjct: 194 VQTDVLVRVKGPL-LAACSSESREL 217
>SGD|S000003493 [details] [associations]
symbol:APL6 "Beta3-like subunit of the yeast AP-3 complex"
species:4932 "Saccharomyces cerevisiae" [GO:0006623 "protein
targeting to vacuole" evidence=IMP] [GO:0030123 "AP-3 adaptor
complex" evidence=IEA;IMP] [GO:0006896 "Golgi to vacuole transport"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0030665
"clathrin-coated vesicle membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR026739 InterPro:IPR026740 Pfam:PF01602 SGD:S000003493
GO:GO:0005794 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 EMBL:BK006941 eggNOG:COG5096 GO:GO:0030665
PANTHER:PTHR11134 GO:GO:0006896 GeneTree:ENSGT00530000063546
GO:GO:0030123 PANTHER:PTHR11134:SF1 OrthoDB:EOG44F9J9 EMBL:U35411
EMBL:Y07777 EMBL:Z73046 PIR:S64594 RefSeq:NP_011777.3
RefSeq:NP_011784.3 ProteinModelPortal:P46682 SMR:P46682
DIP:DIP-2684N IntAct:P46682 MINT:MINT-530434 STRING:P46682
PaxDb:P46682 PeptideAtlas:P46682 EnsemblFungi:YGR261C GeneID:853177
GeneID:853185 KEGG:sce:YGR261C KEGG:sce:YGR268C CYGD:YGR261c
HOGENOM:HOG000248160 OMA:LLHGHFR NextBio:973308
Genevestigator:P46682 GermOnline:YGR261C GO:GO:0006623
Uniprot:P46682
Length = 809
Score = 221 (82.9 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 53/213 (24%), Positives = 114/213 (53%)
Query: 480 LLSTGNTFYILLHLTRLV--IASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYA 537
LL++ N+ + + R++ +AS DV F DVV + T++ ++K+L++LYL+ +A
Sbjct: 50 LLNSRNSREVRDAMKRIISIMASDDDSIDVQLYFADVVKNITTNDTKVKRLIHLYLLRFA 109
Query: 538 KSHPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYV 597
++ P++ ++++N+ K DSN +R A+ + +++ + + ++K + D V
Sbjct: 110 ENDPNLTLLSINSLQKSLSDSNSELRCFALSALSDMKMSSLAPIILHTVKKLVTDPSAMV 169
Query: 598 RKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVAL 657
R A+ + KLY ++ LD LK+L++D++P V++ AV A E + L
Sbjct: 170 RGEVALAIIKLYRAGKNDYHEE-LLDILKELMADTDPKVISCAVLAYKE---CYADHLEL 225
Query: 658 IEMNAQTINKLLTALNECTEWGQVFILDSLSNY 690
+ + + +++ L+ W Q ++++ L Y
Sbjct: 226 LHGHFRRYCRIIKQLDS---WSQSYLIELLIKY 255
Score = 116 (45.9 bits), Expect = 3.7e-09, Sum P(3) = 3.7e-09
Identities = 35/149 (23%), Positives = 76/149 (51%)
Query: 46 DVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAFSTF--FYQKSSSSFQC- 102
DV F DVV + T++ ++K+L++LYL+ +A++ P++ +++ ++ S+S +C
Sbjct: 78 DVQLYFADVVKNITTNDTKVKRLIHLYLLRFAENDPNLTLLSINSLQKSLSDSNSELRCF 137
Query: 103 -MIDIRSIPLFDLCSSVGVFVKDC-EDSNPLIRA-LAVRTMGCIRVDK--ITEYLCEPLR 157
+ + + + L + VK D + ++R +A+ + R K E L + L+
Sbjct: 138 ALSALSDMKMSSLAPIILHTVKKLVTDPSAMVRGEVALAIIKLYRAGKNDYHEELLDILK 197
Query: 158 KCLKDEDPYVRKTAAVCVAKLYDINAQLV 186
+ + D DP V A + + Y + +L+
Sbjct: 198 ELMADTDPKVISCAVLAYKECYADHLELL 226
Score = 98 (39.6 bits), Expect = 2.9e-07, Sum P(3) = 2.9e-07
Identities = 22/88 (25%), Positives = 43/88 (48%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
S+ K DSN +R A+ + +++ + + ++K + D VR A+ +
Sbjct: 119 SINSLQKSLSDSNSELRCFALSALSDMKMSSLAPIILHTVKKLVTDPSAMVRGEVALAII 178
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNP 204
KLY ++ LD LK+L++D++P
Sbjct: 179 KLYRAGKNDYHEE-LLDILKELMADTDP 205
Score = 88 (36.0 bits), Expect = 3.7e-09, Sum P(3) = 3.7e-09
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 325 KVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDV--DFVRKAVRAIGR 382
K F+V DPI + K+ I+ L +++N+ ++ ELK Y + V AV+++ R
Sbjct: 379 KKFYVFPKDPIVASIWKIQILSTLINESNVKEIFKELKYYVASAHFPENVVIMAVKSLSR 438
Query: 383 C 383
C
Sbjct: 439 C 439
Score = 71 (30.1 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 26/128 (20%), Positives = 57/128 (44%)
Query: 689 NYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD-FVSTLTKKLAP 747
+Y +D + + + + +N V+LS L +L L + F+ L + +
Sbjct: 290 SYEVVNDPDLDLFLQSLNCLIYSSNPTVILSCCNALYQLASPLQMKNTKFIEALVRTVT- 348
Query: 748 PLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLA 807
+T E+ A+ ++++ Q L + K F+V DPI + K+ I+ L
Sbjct: 349 --MTENQGNKEMLLQAIHFLSILDQTL--FLPYTKK-FYVFPKDPIVASIWKIQILSTLI 403
Query: 808 SQANIAQV 815
+++N+ ++
Sbjct: 404 NESNVKEI 411
Score = 66 (28.3 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 20/53 (37%), Positives = 29/53 (54%)
Query: 819 VQEAIV-VIKDIFRKYPNKYETIISTLCENL--DTLDEPEARASMIWIIGEYA 868
V +A V VI+ + +K P K+ II L + L T ARA ++W+ GE A
Sbjct: 467 VLDAYVNVIRMLVQKNPTKHLRIIFKLADLLTVQTSLADNARAGIVWLFGEIA 519
Score = 47 (21.6 bits), Expect = 4.6e-05, Sum P(3) = 4.6e-05
Identities = 13/46 (28%), Positives = 21/46 (45%)
Query: 621 FLDQLKDLLSDSNPMVVANAVAALSEM-NEASTSGVALIEMNAQTI 665
FL L L+ SNP V+ + AL ++ + IE +T+
Sbjct: 302 FLQSLNCLIYSSNPTVILSCCNALYQLASPLQMKNTKFIEALVRTV 347
Score = 45 (20.9 bits), Expect = 4.8e-07, Sum P(3) = 4.8e-07
Identities = 12/58 (20%), Positives = 26/58 (44%)
Query: 415 ELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQDSDNPDLRD 472
++L ++ F +E + + Q+L KL D Q ++ + +++ NP D
Sbjct: 528 DVLRRLIQNFSNEGPETRCQILVLSAKLL---SYDIDNFKQAQVTGSEENNQNPPYYD 582
>GENEDB_PFALCIPARUM|PFF0655c [details] [associations]
symbol:PFF0655c "adapter-related protein,
putative" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0030135 "coated vesicle" evidence=ISS]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
Pfam:PF01602 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 PANTHER:PTHR11134
EMBL:AL844505 GO:GO:0030135 GO:GO:0020011 RefSeq:XP_966122.1
ProteinModelPortal:C6KSX7 PRIDE:C6KSX7
EnsemblProtists:PFF0655c:mRNA GeneID:3885757 KEGG:pfa:PFF0655c
EuPathDB:PlasmoDB:PF3D7_0613500 HOGENOM:HOG000281500 Uniprot:C6KSX7
Length = 1363
Score = 226 (84.6 bits), Expect = 9.0e-17, Sum P(3) = 9.0e-17
Identities = 52/144 (36%), Positives = 90/144 (62%)
Query: 506 DVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRAL 565
DVS LF DV+ + +NL LKKL+Y YL+ YA+ + ++ I+ +N+F D ++N IRA
Sbjct: 73 DVSNLFFDVLKNISINNLTLKKLIYNYLILYAEGNEELTILTINSFKNDLNNNNYQIRAS 132
Query: 566 AVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQG-FLDQ 624
A++ M I+ + L L+K KD+ PYVRK+ A + +Y+I+ +DQ FL +
Sbjct: 133 ALKAMASIKSIDMINILMNSLKKLSKDKSPYVRKSCADVIPSIYNID----KDQFMFLRK 188
Query: 625 -LKDLLSDSNPMVVANAVAALSEM 647
L DL++D + +V+++A+ + + +
Sbjct: 189 ILLDLINDQDVVVLSSAIMSFNSL 212
Score = 129 (50.5 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 40/135 (29%), Positives = 70/135 (51%)
Query: 46 DVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAFSTFF-------YQKSSS 98
DVS LF DV+ + +NL LKKL+Y YL+ YA+ + ++ I+ ++F YQ +S
Sbjct: 73 DVSNLFFDVLKNISINNLTLKKLIYNYLILYAEGNEELTILTINSFKNDLNNNNYQIRAS 132
Query: 99 SFQCMIDIRSIPLFDLCSSVGVFVKDCEDSNPLIRALAVRTMGCI-RVDKIT-EYLCEPL 156
+ + M I+SI + ++ + K +D +P +R + I +DK +L + L
Sbjct: 133 ALKAMASIKSIDMINIL--MNSLKKLSKDKSPYVRKSCADVIPSIYNIDKDQFMFLRKIL 190
Query: 157 RKCLKDEDPYVRKTA 171
+ D+D V +A
Sbjct: 191 LDLINDQDVVVLSSA 205
Score = 110 (43.8 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
++ F D ++N IRA A++ M I+ + L L+K KD+ PYVRK+ A +
Sbjct: 114 TINSFKNDLNNNNYQIRASALKAMASIKSIDMINILMNSLKKLSKDKSPYVRKSCADVIP 173
Query: 177 KLYDINAQLVEDQG-FLDQ-LKDLLSDSN 203
+Y+I+ +DQ FL + L DL++D +
Sbjct: 174 SIYNID----KDQFMFLRKILLDLINDQD 198
Score = 63 (27.2 bits), Expect = 9.0e-17, Sum P(3) = 9.0e-17
Identities = 19/72 (26%), Positives = 41/72 (56%)
Query: 802 IMIRLASQANIAQVNYVVQEAIVVIKDIFRK-YPNKYETIISTLCENLDTLDEPEARASM 860
I+I L S NI +Y ++I+ ++ + ++ + N+ I+ LC+ L ++ E + S+
Sbjct: 710 IIIMLNS--NIKLYSY---QSILSLRKLLKQSHKNQIVKILFFLCKILLSIHLEEVKISI 764
Query: 861 IWIIGEYAERID 872
+W + +Y + ID
Sbjct: 765 LWTLTKYQKYID 776
Score = 60 (26.2 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 14/67 (20%), Positives = 36/67 (53%)
Query: 295 LSSEPEVQYVALRNI-NLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQAN 353
+ ++ + L+++ ++I+ + D +K+ + F++K D +K K+D++ L + N
Sbjct: 605 MEKNEDMYEIFLKSVKHIIIYLKDDFVKY-ISFFYIKPQDTNIIKSIKIDLLYILKNDYN 663
Query: 354 IAQVLSE 360
+L E
Sbjct: 664 KIIILDE 670
Score = 59 (25.8 bits), Expect = 9.0e-17, Sum P(3) = 9.0e-17
Identities = 25/128 (19%), Positives = 62/128 (48%)
Query: 685 DSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKK 744
D S+Y + + + +++ L+ + +VVL + L L + E + ++
Sbjct: 545 DDFSSY----EVDIEIFIDKLLLLLSSNSCSVVLMCISSLYHLTKFFYKEY-IIDSIINT 599
Query: 745 LAPPLVTLLSSEPEVQYVALRNI-NLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIM 803
L T+ +E ++ + L+++ ++I+ + D +K+ + F++K D +K K+D++
Sbjct: 600 LFR--CTMEKNE-DMYEIFLKSVKHIIIYLKDDFVKY-ISFFYIKPQDTNIIKSIKIDLL 655
Query: 804 IRLASQAN 811
L + N
Sbjct: 656 YILKNDYN 663
Score = 46 (21.3 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 16/85 (18%), Positives = 38/85 (44%)
Query: 383 CAIKVEQSAERCVSTLLDLIQTKYAERIDNA--DELLESFLEGFHDENTQVQLQLLTAIV 440
C I + E ++L + TKY + ID ++ L+ FH +++ ++ +
Sbjct: 749 CKILLSIHLEEVKISILWTL-TKYQKYIDPLLLYDISRILLKSFHTSTKVIKIHIIHFVF 807
Query: 441 KLFLKRPTDTQELVQQVLSLATQDS 465
K+++ + L + ++ T D+
Sbjct: 808 KIWIYQYASIMLLSNENINNQTNDA 832
Score = 43 (20.2 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 11/40 (27%), Positives = 24/40 (60%)
Query: 610 DINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNE 649
D ++ V+ + F+D+L LLS ++ VV +++L + +
Sbjct: 546 DFSSYEVDIEIFIDKLLLLLSSNSCSVVLMCISSLYHLTK 585
>UNIPROTKB|C6KSX7 [details] [associations]
symbol:PFF0655c "Adapter-related protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0020011 "apicoplast"
evidence=IDA] [GO:0030135 "coated vesicle" evidence=ISS]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
Pfam:PF01602 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 PANTHER:PTHR11134
EMBL:AL844505 GO:GO:0030135 GO:GO:0020011 RefSeq:XP_966122.1
ProteinModelPortal:C6KSX7 PRIDE:C6KSX7
EnsemblProtists:PFF0655c:mRNA GeneID:3885757 KEGG:pfa:PFF0655c
EuPathDB:PlasmoDB:PF3D7_0613500 HOGENOM:HOG000281500 Uniprot:C6KSX7
Length = 1363
Score = 226 (84.6 bits), Expect = 9.0e-17, Sum P(3) = 9.0e-17
Identities = 52/144 (36%), Positives = 90/144 (62%)
Query: 506 DVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRAL 565
DVS LF DV+ + +NL LKKL+Y YL+ YA+ + ++ I+ +N+F D ++N IRA
Sbjct: 73 DVSNLFFDVLKNISINNLTLKKLIYNYLILYAEGNEELTILTINSFKNDLNNNNYQIRAS 132
Query: 566 AVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQG-FLDQ 624
A++ M I+ + L L+K KD+ PYVRK+ A + +Y+I+ +DQ FL +
Sbjct: 133 ALKAMASIKSIDMINILMNSLKKLSKDKSPYVRKSCADVIPSIYNID----KDQFMFLRK 188
Query: 625 -LKDLLSDSNPMVVANAVAALSEM 647
L DL++D + +V+++A+ + + +
Sbjct: 189 ILLDLINDQDVVVLSSAIMSFNSL 212
Score = 129 (50.5 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 40/135 (29%), Positives = 70/135 (51%)
Query: 46 DVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAFSTFF-------YQKSSS 98
DVS LF DV+ + +NL LKKL+Y YL+ YA+ + ++ I+ ++F YQ +S
Sbjct: 73 DVSNLFFDVLKNISINNLTLKKLIYNYLILYAEGNEELTILTINSFKNDLNNNNYQIRAS 132
Query: 99 SFQCMIDIRSIPLFDLCSSVGVFVKDCEDSNPLIRALAVRTMGCI-RVDKIT-EYLCEPL 156
+ + M I+SI + ++ + K +D +P +R + I +DK +L + L
Sbjct: 133 ALKAMASIKSIDMINIL--MNSLKKLSKDKSPYVRKSCADVIPSIYNIDKDQFMFLRKIL 190
Query: 157 RKCLKDEDPYVRKTA 171
+ D+D V +A
Sbjct: 191 LDLINDQDVVVLSSA 205
Score = 110 (43.8 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 30/89 (33%), Positives = 50/89 (56%)
Query: 117 SVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
++ F D ++N IRA A++ M I+ + L L+K KD+ PYVRK+ A +
Sbjct: 114 TINSFKNDLNNNNYQIRASALKAMASIKSIDMINILMNSLKKLSKDKSPYVRKSCADVIP 173
Query: 177 KLYDINAQLVEDQG-FLDQ-LKDLLSDSN 203
+Y+I+ +DQ FL + L DL++D +
Sbjct: 174 SIYNID----KDQFMFLRKILLDLINDQD 198
Score = 63 (27.2 bits), Expect = 9.0e-17, Sum P(3) = 9.0e-17
Identities = 19/72 (26%), Positives = 41/72 (56%)
Query: 802 IMIRLASQANIAQVNYVVQEAIVVIKDIFRK-YPNKYETIISTLCENLDTLDEPEARASM 860
I+I L S NI +Y ++I+ ++ + ++ + N+ I+ LC+ L ++ E + S+
Sbjct: 710 IIIMLNS--NIKLYSY---QSILSLRKLLKQSHKNQIVKILFFLCKILLSIHLEEVKISI 764
Query: 861 IWIIGEYAERID 872
+W + +Y + ID
Sbjct: 765 LWTLTKYQKYID 776
Score = 60 (26.2 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 14/67 (20%), Positives = 36/67 (53%)
Query: 295 LSSEPEVQYVALRNI-NLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQAN 353
+ ++ + L+++ ++I+ + D +K+ + F++K D +K K+D++ L + N
Sbjct: 605 MEKNEDMYEIFLKSVKHIIIYLKDDFVKY-ISFFYIKPQDTNIIKSIKIDLLYILKNDYN 663
Query: 354 IAQVLSE 360
+L E
Sbjct: 664 KIIILDE 670
Score = 59 (25.8 bits), Expect = 9.0e-17, Sum P(3) = 9.0e-17
Identities = 25/128 (19%), Positives = 62/128 (48%)
Query: 685 DSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKK 744
D S+Y + + + +++ L+ + +VVL + L L + E + ++
Sbjct: 545 DDFSSY----EVDIEIFIDKLLLLLSSNSCSVVLMCISSLYHLTKFFYKEY-IIDSIINT 599
Query: 745 LAPPLVTLLSSEPEVQYVALRNI-NLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIM 803
L T+ +E ++ + L+++ ++I+ + D +K+ + F++K D +K K+D++
Sbjct: 600 LFR--CTMEKNE-DMYEIFLKSVKHIIIYLKDDFVKY-ISFFYIKPQDTNIIKSIKIDLL 655
Query: 804 IRLASQAN 811
L + N
Sbjct: 656 YILKNDYN 663
Score = 46 (21.3 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 16/85 (18%), Positives = 38/85 (44%)
Query: 383 CAIKVEQSAERCVSTLLDLIQTKYAERIDNA--DELLESFLEGFHDENTQVQLQLLTAIV 440
C I + E ++L + TKY + ID ++ L+ FH +++ ++ +
Sbjct: 749 CKILLSIHLEEVKISILWTL-TKYQKYIDPLLLYDISRILLKSFHTSTKVIKIHIIHFVF 807
Query: 441 KLFLKRPTDTQELVQQVLSLATQDS 465
K+++ + L + ++ T D+
Sbjct: 808 KIWIYQYASIMLLSNENINNQTNDA 832
Score = 43 (20.2 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 11/40 (27%), Positives = 24/40 (60%)
Query: 610 DINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNE 649
D ++ V+ + F+D+L LLS ++ VV +++L + +
Sbjct: 546 DFSSYEVDIEIFIDKLLLLLSSNSCSVVLMCISSLYHLTK 585
>UNIPROTKB|B1ALD0 [details] [associations]
symbol:AP4B1 "AP-4 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR002553 InterPro:IPR015151 InterPro:IPR016024
InterPro:IPR016342 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
PIRSF:PIRSF002291 SMART:SM01020 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0030131 Gene3D:3.30.310.10 InterPro:IPR012295
PANTHER:PTHR11134 EMBL:AL137856 UniGene:Hs.515048 HGNC:HGNC:572
HOGENOM:HOG000294128 HOVERGEN:HBG050521 IPI:IPI00514624 SMR:B1ALD0
STRING:B1ALD0 Ensembl:ENST00000369567 UCSC:uc001eea.1
Uniprot:B1ALD0
Length = 571
Score = 190 (71.9 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 59/221 (26%), Positives = 105/221 (47%)
Query: 672 LNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEML 731
+++ +WGQ +L+ L Y P+ + E I + L ++ VV+ A K+ + L +M
Sbjct: 39 MSKLDQWGQAEVLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFLILAKMF 98
Query: 732 PGEGDFVST-LTKKLAPPLVTLLSSEP-EVQYVALRNINLIVQKRPDILKHEMKVFFVKY 789
P V T + ++ PL+ SSE E+ +VAL ++ I+ P K FF Y
Sbjct: 99 P----HVQTDVLVRVKGPLLAACSSESRELCFVALCHVRQILHSLPGHFSSHYKKFFCSY 154
Query: 790 NDPIYVKLEKLDIMIRLASQANIAQV-----NYVV-------QEAIVVIKDIFRKYPNKY 837
++P Y+KL+K++++ L + N+ QV Y Q AI I I R Y ++
Sbjct: 155 SEPHYIKLQKVEVLCELVNDENVQQVLEELRGYCTDVSADFAQAAIFAIGGIARTYTDQC 214
Query: 838 ETIISTLC----ENLDTLDEPEARASMIWIIGEYAERIDNA 874
I++ L E++ T+ R ++W+ + E + A
Sbjct: 215 VQILTELLGLRQEHITTVVVQTFR-DLVWLCPQCTEAVCQA 254
Score = 188 (71.2 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 41/114 (35%), Positives = 65/114 (57%)
Query: 290 PLVTLLSSEP-EVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRL 348
PL+ SSE E+ +VAL ++ I+ P K FF Y++P Y+KL+K++++ L
Sbjct: 112 PLLAACSSESRELCFVALCHVRQILHSLPGHFSSHYKKFFCSYSEPHYIKLQKVEVLCEL 171
Query: 349 ASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI 402
+ N+ QVL EL+ Y T+V DF + A+ AIG A ++CV L +L+
Sbjct: 172 VNDENVQQVLEELRGYCTDVSADFAQAAIFAIGGIA---RTYTDQCVQILTELL 222
Score = 167 (63.8 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 48/142 (33%), Positives = 75/142 (52%)
Query: 356 QVLSEL----KEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLD------LIQTK 405
Q+L+EL +E+ T V V R V +C V Q+ C + D LI
Sbjct: 216 QILTELLGLRQEHITTVVVQTFRDLVWLCPQCTEAVCQALPGCEENIQDSEGKQALIWLL 275
Query: 406 --YAERIDNADELLESFLEGFHDEN-TQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLAT 462
+ ERI NA +LE F+E E V+++LLTA+++LFL RP + Q+++ ++L
Sbjct: 276 GVHGERIPNAPYVLEDFVENVKSETFPAVKMELLTALLRLFLSRPAECQDMLGRLLYYCI 335
Query: 463 QDSDNPDLRDRGFIYWRLLSTG 484
++ + +RDRG Y+RLL G
Sbjct: 336 EEEKDMAVRDRGLFYYRLLLVG 357
Score = 91 (37.1 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 19/69 (27%), Positives = 36/69 (52%)
Query: 817 YVVQEAIVVIKDIFRKYPNKYETIISTL--CENLDTLDEPEARASMIWIIGEYAERIDNA 874
++ + +D+ P E + L CE + + + E + ++IW++G + ERI NA
Sbjct: 228 HITTVVVQTFRDLVWLCPQCTEAVCQALPGCE--ENIQDSEGKQALIWLLGVHGERIPNA 285
Query: 875 DELLESFLE 883
+LE F+E
Sbjct: 286 PYVLEDFVE 294
>UNIPROTKB|F1NY20 [details] [associations]
symbol:AP4B1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0005802 "trans-Golgi
network" evidence=IEA] InterPro:IPR002553 InterPro:IPR015151
InterPro:IPR016024 InterPro:IPR026739 Pfam:PF01602 Pfam:PF09066
SMART:SM01020 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0005802 GO:GO:0030131
PANTHER:PTHR11134 GeneTree:ENSGT00530000063138 EMBL:AADN02045017
IPI:IPI00588021 Ensembl:ENSGALT00000040096 ArrayExpress:F1NY20
Uniprot:F1NY20
Length = 534
Score = 179 (68.1 bits), Expect = 7.7e-15, Sum P(2) = 7.7e-15
Identities = 41/125 (32%), Positives = 68/125 (54%)
Query: 290 PLVTLLSSEP-EVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRL 348
PL+ +SE E+ + AL ++ I+ P K FF Y++P Y+K +K++++ L
Sbjct: 74 PLLAACTSESRELCFTALCHVRQILSSLPGHFSSHYKKFFCSYSEPHYIKCQKMEVLCEL 133
Query: 349 ASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKYAE 408
+ N+ QVL ELK Y T++ V+ + A+ AIG A E+CV L +L+ + E
Sbjct: 134 VNDENVQQVLEELKGYCTDISVELAQGAISAIGSIA---RTYTEQCVGILTELLGLQQ-E 189
Query: 409 RIDNA 413
I +A
Sbjct: 190 HITSA 194
Score = 162 (62.1 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 38/140 (27%), Positives = 68/140 (48%)
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPG-EG 735
+WGQ +L L Y P+ + E +I + L ++ +VV++A K+ + L P +
Sbjct: 6 QWGQSEVLAFLLRYRPRSEEELFNILSLLDGYLKSSSPSVVMAATKLFLVLAREYPHVQA 65
Query: 736 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYV 795
D L + P L S E+ + AL ++ I+ P K FF Y++P Y+
Sbjct: 66 D---VLVRVKGPLLAACTSESRELCFTALCHVRQILSSLPGHFSSHYKKFFCSYSEPHYI 122
Query: 796 KLEKLDIMIRLASQANIAQV 815
K +K++++ L + N+ QV
Sbjct: 123 KCQKMEVLCELVNDENVQQV 142
Score = 159 (61.0 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 43/140 (30%), Positives = 73/140 (52%)
Query: 354 IAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLD------LIQT--K 405
+ ++L +E+ T V R V +C V Q+ C + D LI
Sbjct: 180 LTELLGLQQEHITSAVVQAFRDLVWLCPQCTDAVCQALPGCEDIIQDSEGKQALIWLLGA 239
Query: 406 YAERIDNADELLESFLEGFHDEN-TQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQD 464
+ E++ NA +LE F+E E V+++LLTA+V+LFL RP + Q+++ ++L ++
Sbjct: 240 HGEKVPNAPYVLEDFVENVKTEVFPAVKMELLTALVRLFLSRPAECQDMLGRLLYHCIEE 299
Query: 465 SDNPDLRDRGFIYWRLLSTG 484
+ +RDRG Y+RLL +G
Sbjct: 300 EKDMSVRDRGLFYYRLLQSG 319
Score = 93 (37.8 bits), Expect = 7.7e-15, Sum P(2) = 7.7e-15
Identities = 18/72 (25%), Positives = 37/72 (51%)
Query: 814 QVNYVVQEAIVVIKDIFRKYPNKYETIISTL--CENLDTLDEPEARASMIWIIGEYAERI 871
Q ++ + +D+ P + + L CE D + + E + ++IW++G + E++
Sbjct: 187 QQEHITSAVVQAFRDLVWLCPQCTDAVCQALPGCE--DIIQDSEGKQALIWLLGAHGEKV 244
Query: 872 DNADELLESFLE 883
NA +LE F+E
Sbjct: 245 PNAPYVLEDFVE 256
>UNIPROTKB|B1ALD3 [details] [associations]
symbol:AP4B1 "AP-4 complex subunit beta-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
Pfam:PF01602 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 PANTHER:PTHR11134
EMBL:AL137856 UniGene:Hs.515048 HGNC:HGNC:572 HOVERGEN:HBG106066
IPI:IPI00640132 SMR:B1ALD3 STRING:B1ALD3 Ensembl:ENST00000432415
HOGENOM:HOG000200012 Uniprot:B1ALD3
Length = 175
Score = 168 (64.2 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 40/139 (28%), Positives = 73/139 (52%)
Query: 672 LNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEML 731
+++ +WGQ +L+ L Y P+ + E I + L ++ VV+ A K+ + L +M
Sbjct: 39 MSKLDQWGQAEVLNFLLRYQPRSEEELFDILNLLDSFLKSSSPGVVMGATKLFLILAKMF 98
Query: 732 PGEGDFVST-LTKKLAPPLVTLLSSEP-EVQYVALRNINLIVQKRPDILKHEMKVFFVKY 789
P V T + ++ PL+ SSE E+ +VAL ++ I+ P K FF Y
Sbjct: 99 P----HVQTDVLVRVKGPLLAACSSESRELCFVALCHVRQILHSLPGHFSSHYKKFFCSY 154
Query: 790 NDPIYVKLEKLDIMIRLAS 808
++P Y+KL+K++++ L +
Sbjct: 155 SEPHYIKLQKVEVLCELVN 173
>UNIPROTKB|E1BWK3 [details] [associations]
symbol:AP3D1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017105 Pfam:PF01602 PIRSF:PIRSF037092 GO:GO:0005794
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 CTD:8943
GeneTree:ENSGT00550000075067 KO:K12396 InterPro:IPR010474
Pfam:PF06375 EMBL:AADN02066738 IPI:IPI00819277
RefSeq:XP_003642902.1 UniGene:Gga.55207 Ensembl:ENSGALT00000041197
GeneID:420079 KEGG:gga:420079 ArrayExpress:E1BWK3 Uniprot:E1BWK3
Length = 1153
Score = 177 (67.4 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 71/351 (20%), Positives = 147/351 (41%)
Query: 503 VGKDVS-ALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPL 561
+G D+S A F +++ M K++ YL D+ ++ N KD N
Sbjct: 68 LGYDISWAAF-NIIEVMSASKFTFKRIGYLAASQCFHEGTDVIMLTTNQIRKDLSSPNQY 126
Query: 562 IRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGF 621
+A+ + C + L + + PY+RK A + + K++ + +
Sbjct: 127 DTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPESLRPA-- 184
Query: 622 LDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTEWGQV 681
+LK+ L D +P V + AV + E+ + + A KL+T+ W +
Sbjct: 185 FPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSL---APLFFKLMTS--STNNWVLI 239
Query: 682 FILDSLSNYSPKDDREAQSICERITPRLAHANAAVVL------SAVKVLMKLMEMLPGEG 735
I+ +P + R + + E +T L H+ +A+ L + + VL+ L +P
Sbjct: 240 KIIKLFGALTPLEPRLGKKLIEPLT-NLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHS 298
Query: 736 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRP-DILKHEMKVFFVKYNDPIY 794
+ +KL + + S+ ++Y+ L ++ I++ P + H+ + +
Sbjct: 299 ASIQLCVQKLR---ILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDES 355
Query: 795 VKLEKLDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETIISTLC 845
++L LD++ + S+ N+ ++ V + I V K Y ++ T I +C
Sbjct: 356 IRLRALDLLYGMVSKKNLMEI--VKKLMIHVDKAEGTTYRDELLTKIIDIC 404
Score = 58 (25.5 bits), Expect = 4.9e-10, Sum P(2) = 4.9e-10
Identities = 9/21 (42%), Positives = 16/21 (76%)
Query: 862 WIIGEYAERIDNADELLESFL 882
WI GE++E ++ A++ LE+ L
Sbjct: 487 WICGEFSEHLEEANQTLEAML 507
>UNIPROTKB|E1C262 [details] [associations]
symbol:AP3D1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008089 "anterograde axon cargo transport"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0033365 "protein localization to organelle" evidence=IEA]
[GO:0043195 "terminal bouton" evidence=IEA] [GO:0048007 "antigen
processing and presentation, exogenous lipid antigen via MHC class
Ib" evidence=IEA] [GO:0048490 "anterograde synaptic vesicle
transport" evidence=IEA] [GO:0048499 "synaptic vesicle membrane
organization" evidence=IEA] [GO:0051138 "positive regulation of NK
T cell differentiation" evidence=IEA] [GO:0061088 "regulation of
sequestering of zinc ion" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR017105 Pfam:PF01602
PIRSF:PIRSF037092 GO:GO:0005794 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192
GO:GO:0008565 GO:GO:0010008 GO:GO:0033365 GO:GO:0048007
GO:GO:0051138 GeneTree:ENSGT00550000075067 OMA:VCKLTYL
GO:GO:0061088 GO:GO:0048499 InterPro:IPR010474 Pfam:PF06375
EMBL:AADN02066738 IPI:IPI00573196 Ensembl:ENSGALT00000001472
ArrayExpress:E1C262 Uniprot:E1C262
Length = 1208
Score = 177 (67.4 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 71/351 (20%), Positives = 147/351 (41%)
Query: 503 VGKDVS-ALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPL 561
+G D+S A F +++ M K++ YL D+ ++ N KD N
Sbjct: 68 LGYDISWAAF-NIIEVMSASKFTFKRIGYLAASQCFHEGTDVIMLTTNQIRKDLSSPNQY 126
Query: 562 IRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGF 621
+A+ + C + L + + PY+RK A + + K++ + +
Sbjct: 127 DTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPESLRPA-- 184
Query: 622 LDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTEWGQV 681
+LK+ L D +P V + AV + E+ + + A KL+T+ W +
Sbjct: 185 FPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSL---APLFFKLMTS--STNNWVLI 239
Query: 682 FILDSLSNYSPKDDREAQSICERITPRLAHANAAVVL------SAVKVLMKLMEMLPGEG 735
I+ +P + R + + E +T L H+ +A+ L + + VL+ L +P
Sbjct: 240 KIIKLFGALTPLEPRLGKKLIEPLT-NLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHS 298
Query: 736 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRP-DILKHEMKVFFVKYNDPIY 794
+ +KL + + S+ ++Y+ L ++ I++ P + H+ + +
Sbjct: 299 ASIQLCVQKLR---ILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDES 355
Query: 795 VKLEKLDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETIISTLC 845
++L LD++ + S+ N+ ++ V + I V K Y ++ T I +C
Sbjct: 356 IRLRALDLLYGMVSKKNLMEI--VKKLMIHVDKAEGTTYRDELLTKIIDIC 404
Score = 58 (25.5 bits), Expect = 5.5e-10, Sum P(2) = 5.5e-10
Identities = 9/21 (42%), Positives = 16/21 (76%)
Query: 862 WIIGEYAERIDNADELLESFL 882
WI GE++E ++ A++ LE+ L
Sbjct: 487 WICGEFSEHLEEANQTLEAML 507
>UNIPROTKB|K7EKZ5 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0016192 "vesicle-mediated transport" evidence=IEA]
InterPro:IPR026739 Gene3D:1.25.10.10 InterPro:IPR011989
PANTHER:PTHR11134 EMBL:AC006237 HGNC:HGNC:563 EMBL:AC015911
EMBL:AC004134 Ensembl:ENST00000590538 Ensembl:ENST00000591610
Ensembl:ENST00000592167 Uniprot:K7EKZ5
Length = 63
Score = 148 (57.2 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 32/57 (56%), Positives = 36/57 (63%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNC 57
MTDSKYFTT KKGEIFELK ELN++ IA+MTVGKDV +V C
Sbjct: 1 MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVRCCSSEVNFC 57
>UNIPROTKB|K7ERE4 [details] [associations]
symbol:AP2B1 "AP-2 complex subunit beta" species:9606 "Homo
sapiens" [GO:0016192 "vesicle-mediated transport" evidence=IEA]
InterPro:IPR016024 InterPro:IPR026739 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PANTHER:PTHR11134
EMBL:AC006237 HGNC:HGNC:563 EMBL:AC015911 EMBL:AC004134
Ensembl:ENST00000592191 Uniprot:K7ERE4
Length = 49
Score = 148 (57.2 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 31/48 (64%), Positives = 34/48 (70%)
Query: 1 MTDSKYFTTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVS 48
MTDSKYFTT KKGEIFELK ELN++ IA+MTVGKDVS
Sbjct: 1 MTDSKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVS 48
>ZFIN|ZDB-GENE-050208-437 [details] [associations]
symbol:ap3d1 "adaptor-related protein complex 3,
delta 1 subunit" species:7955 "Danio rerio" [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
Pfam:PF01602 ZFIN:ZDB-GENE-050208-437 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192
eggNOG:COG5096 CTD:8943 GeneTree:ENSGT00550000075067
HOGENOM:HOG000000981 KO:K12396 OMA:VCKLTYL OrthoDB:EOG45TCMD
InterPro:IPR010474 Pfam:PF06375 HOVERGEN:HBG050520 EMBL:BX005201
EMBL:BC171356 IPI:IPI00864428 RefSeq:NP_001038480.1
UniGene:Dr.74054 Ensembl:ENSDART00000105580 GeneID:563359
KEGG:dre:563359 Uniprot:B7ZUU8
Length = 1247
Score = 177 (67.4 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 65/321 (20%), Positives = 136/321 (42%)
Query: 503 VGKDVS-ALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPL 561
+G DVS A F ++V M + K++ YL D+ ++ N KD N
Sbjct: 68 LGYDVSWAAF-NIVEVMSSSKFTYKRIGYLAASQCFHEGTDVIMLTTNQIRKDLSSPNQY 126
Query: 562 IRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGF 621
+A+ + C + L + + PY+RK A + + K++ + +
Sbjct: 127 DTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPESLRPA-- 184
Query: 622 LDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTEWGQV 681
+LK+ L D +P V + AV + E+ + + A KL+T+ W +
Sbjct: 185 FPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSL---APLFFKLMTS--STNNWVLI 239
Query: 682 FILDSLSNYSPKDDREAQSICERITPRLAHANAAVVL------SAVKVLMKLMEMLPGEG 735
I+ +P + R + + E +T L H+ +A+ L + + VL+ L +P
Sbjct: 240 KIIKLFGALTPLEPRLGKKLIEPLT-NLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHS 298
Query: 736 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRP-DILKHEMKVFFVKYNDPIY 794
+ +KL + + S+ ++Y+ L ++ I++ P + H+ + +
Sbjct: 299 ASIQLCVQKLR---ILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDES 355
Query: 795 VKLEKLDIMIRLASQANIAQV 815
++L LD++ + S+ N+ ++
Sbjct: 356 IRLRALDLLYGMVSKKNLMEI 376
Score = 48 (22.0 bits), Expect = 6.4e-09, Sum P(2) = 6.4e-09
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 862 WIIGEYAERIDNADELLESFL 882
WI GE+AE +++ LE+ L
Sbjct: 487 WICGEFAEHLEDPMLTLEAML 507
>UNIPROTKB|F5GYB0 [details] [associations]
symbol:AP3B2 "AP-3 complex subunit beta-2" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR026739
Pfam:PF01602 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192 PANTHER:PTHR11134
HGNC:HGNC:567 EMBL:AC105339 EMBL:FJ695193 IPI:IPI01015207
ProteinModelPortal:F5GYB0 SMR:F5GYB0 Ensembl:ENST00000542200
ArrayExpress:F5GYB0 Bgee:F5GYB0 Uniprot:F5GYB0
Length = 141
Score = 142 (55.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 30/85 (35%), Positives = 54/85 (63%)
Query: 480 LLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKS 539
+L T N + L + ++A + GK+ S LFP VV + N+E+KKLVY+YL+ YA+
Sbjct: 45 MLDT-NKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRYAEE 103
Query: 540 HPDMAIMAVNTFVKDCEDSNPLIRA 564
D+A+++++TF + ++ P++ A
Sbjct: 104 QQDLALLSISTFQRGLKE--PVVMA 126
Score = 135 (52.6 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 28/75 (37%), Positives = 45/75 (60%)
Query: 17 ELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNY 76
+LK L+++ +A + GK+ S LFP VV + N+E+KKLVY+YL+ Y
Sbjct: 41 DLKEMLDTNKDSLKLEAMKRIVAMIARGKNASDLFPAVVKNVACKNIEVKKLVYVYLVRY 100
Query: 77 AKSHPDMAIMAFSTF 91
A+ D+A+++ STF
Sbjct: 101 AEEQQDLALLSISTF 115
>UNIPROTKB|Q865S1 [details] [associations]
symbol:AP3D1 "AP-3 complex subunit delta-1" species:9913
"Bos taurus" [GO:0048490 "anterograde synaptic vesicle transport"
evidence=ISS] [GO:0008089 "anterograde axon cargo transport"
evidence=ISS] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0061088 "regulation of sequestering of zinc ion" evidence=IEA]
[GO:0051138 "positive regulation of NK T cell differentiation"
evidence=IEA] [GO:0048499 "synaptic vesicle membrane organization"
evidence=IEA] [GO:0048007 "antigen processing and presentation,
exogenous lipid antigen via MHC class Ib" evidence=IEA] [GO:0043195
"terminal bouton" evidence=IEA] [GO:0033365 "protein localization
to organelle" evidence=IEA] [GO:0010008 "endosome membrane"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 InterPro:IPR017105 Pfam:PF01602
PIRSF:PIRSF037092 GO:GO:0006886 GO:GO:0000139 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0030117
GO:GO:0008565 GO:GO:0010008 GO:GO:0008089 GO:GO:0033365
eggNOG:COG5096 GO:GO:0048490 GO:GO:0048007 GO:GO:0051138
EMBL:AB015979 EMBL:S75828 EMBL:M98430 IPI:IPI00685602
RefSeq:NP_776423.3 UniGene:Bt.8223 ProteinModelPortal:Q865S1
STRING:Q865S1 PRIDE:Q865S1 Ensembl:ENSBTAT00000011906 GeneID:281023
KEGG:bta:281023 CTD:8943 GeneTree:ENSGT00550000075067
HOGENOM:HOG000000981 HOVERGEN:HBG004853 InParanoid:Q865S1 KO:K12396
OMA:VCKLTYL OrthoDB:EOG45TCMD NextBio:20805113 ArrayExpress:Q865S1
GO:GO:0061088 GO:GO:0048499 InterPro:IPR010474 Pfam:PF06375
Uniprot:Q865S1
Length = 1207
Score = 170 (64.9 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 63/321 (19%), Positives = 135/321 (42%)
Query: 503 VGKDVS-ALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPL 561
+G D+S A F +++ M K++ YL D+ ++ N KD +
Sbjct: 68 LGYDISWAAF-NIIEVMSASKFTFKRIGYLAASQCFHEGTDVIMLTTNQIRKDLSSPSQY 126
Query: 562 IRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGF 621
+A+ + C + L + + PY+RK A + + K++ + +
Sbjct: 127 DTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPESLRPA-- 184
Query: 622 LDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTEWGQV 681
+LK+ L D +P V + AV + E+ + + A KL+T+ W +
Sbjct: 185 FPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSL---APLFFKLMTS--STNNWVLI 239
Query: 682 FILDSLSNYSPKDDREAQSICERITPRLAHANAAVVL------SAVKVLMKLMEMLPGEG 735
I+ +P + R + + E +T L H+ +A+ L + + VL+ L +P
Sbjct: 240 KIIKLFGALTPLEPRLGKKLIEPLT-NLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHS 298
Query: 736 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRP-DILKHEMKVFFVKYNDPIY 794
+ +KL + + S+ ++Y+ L ++ I++ P + H+ V +
Sbjct: 299 ASIQLCVQKLR---ILIEDSDQNLKYLGLLAMSKILRTHPKSVQAHKDLVLQCLDDKDES 355
Query: 795 VKLEKLDIMIRLASQANIAQV 815
++L LD++ + S+ N+ ++
Sbjct: 356 IRLRALDLLYGMVSKKNLMEI 376
Score = 50 (22.7 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 862 WIIGEYAERIDNADELLESFL 882
WI GE++E + + LE+ L
Sbjct: 487 WICGEFSEHLQEPQQTLEAML 507
>UNIPROTKB|E2QXV5 [details] [associations]
symbol:AP3D1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017105 Pfam:PF01602 PIRSF:PIRSF037092 GO:GO:0005794
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565
GeneTree:ENSGT00550000075067 OMA:VCKLTYL InterPro:IPR010474
Pfam:PF06375 EMBL:AAEX03012612 Ensembl:ENSCAFT00000030886
Uniprot:E2QXV5
Length = 1216
Score = 171 (65.3 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 63/321 (19%), Positives = 135/321 (42%)
Query: 503 VGKDVS-ALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPL 561
+G D+S A F +++ M K++ YL D+ ++ N KD +
Sbjct: 68 LGYDISWAAF-NIIEVMSASKFTFKRIGYLAASQCFHEGTDVIMLTTNQIRKDLSSPSQY 126
Query: 562 IRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGF 621
+A+ + C + L + + PY+RK A + + K++ + +
Sbjct: 127 DTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPESLRPA-- 184
Query: 622 LDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTEWGQV 681
+LK+ L D +P V + AV + E+ + + A KL+T+ W +
Sbjct: 185 FPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSL---APLFFKLMTS--STNNWVLI 239
Query: 682 FILDSLSNYSPKDDREAQSICERITPRLAHANAAVVL------SAVKVLMKLMEMLPGEG 735
I+ +P + R + + E +T L H+ +A+ L + + VL+ L +P
Sbjct: 240 KIIKLFGALTPLEPRLGKKLIEPLT-NLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHS 298
Query: 736 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRP-DILKHEMKVFFVKYNDPIY 794
+ +KL + + S+ ++Y+ L ++ I++ P + H+ V +
Sbjct: 299 ASIQLCVQKLR---ILIEDSDQNLKYLGLLAMSKILRTHPKSVQAHKDLVLQCLDDKDES 355
Query: 795 VKLEKLDIMIRLASQANIAQV 815
++L LD++ + S+ N+ ++
Sbjct: 356 IRLRALDLLYGMVSKKNLVEI 376
Score = 49 (22.3 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 862 WIIGEYAERIDNADELLESFL 882
WI GE++E + + LE+ L
Sbjct: 487 WICGEFSEHLQEPHQTLEAML 507
>MGI|MGI:107734 [details] [associations]
symbol:Ap3d1 "adaptor-related protein complex 3, delta 1
subunit" species:10090 "Mus musculus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=TAS] [GO:0006810
"transport" evidence=IEA] [GO:0006829 "zinc ion transport"
evidence=TAS] [GO:0006886 "intracellular protein transport"
evidence=IMP;TAS] [GO:0008089 "anterograde axon cargo transport"
evidence=IMP] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=ISO;IDA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0019882 "antigen processing and presentation"
evidence=IMP] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030424
"axon" evidence=IDA] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0043195 "terminal bouton"
evidence=IDA] [GO:0048007 "antigen processing and presentation,
exogenous lipid antigen via MHC class Ib" evidence=IMP] [GO:0048490
"anterograde synaptic vesicle transport" evidence=IMP] [GO:0048499
"synaptic vesicle membrane organization" evidence=IMP] [GO:0051138
"positive regulation of NK T cell differentiation" evidence=IMP]
[GO:0061088 "regulation of sequestering of zinc ion"
evidence=ISO;TAS] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017105 Pfam:PF01602 PIRSF:PIRSF037092 MGI:MGI:107734
GO:GO:0006886 GO:GO:0000139 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0030117 GO:GO:0008565
GO:GO:0043195 GO:GO:0010008 GO:GO:0008089 GO:GO:0005802
GO:GO:0033365 eggNOG:COG5096 GO:GO:0048490 GO:GO:0048007
GO:GO:0051138 GO:GO:0006829 CTD:8943 GeneTree:ENSGT00550000075067
HOGENOM:HOG000000981 KO:K12396 OMA:VCKLTYL OrthoDB:EOG45TCMD
GO:GO:0061088 GO:GO:0048499 InterPro:IPR010474 Pfam:PF06375
HOVERGEN:HBG050520 ChiTaRS:AP3D1 EMBL:AB004305 EMBL:BC048786
EMBL:BC053066 IPI:IPI00117811 PIR:T13946 RefSeq:NP_031486.1
UniGene:Mm.209294 ProteinModelPortal:O54774 SMR:O54774
DIP:DIP-32163N IntAct:O54774 STRING:O54774 PhosphoSite:O54774
PaxDb:O54774 PRIDE:O54774 Ensembl:ENSMUST00000020420 GeneID:11776
KEGG:mmu:11776 UCSC:uc007gek.1 InParanoid:O54774 NextBio:279571
Bgee:O54774 Genevestigator:O54774 GermOnline:ENSMUSG00000020198
Uniprot:O54774
Length = 1199
Score = 169 (64.5 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 62/321 (19%), Positives = 135/321 (42%)
Query: 503 VGKDVS-ALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPL 561
+G D+S A F +++ M K++ YL D+ ++ N KD +
Sbjct: 68 LGYDISWAAF-NIIEVMSASKFTFKRVGYLAASQCFHEGTDVIMLTTNQIRKDLSSPSQY 126
Query: 562 IRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGF 621
+A+ + C + L + + PY+RK A + + K++ + +
Sbjct: 127 DTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPESLRPA-- 184
Query: 622 LDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTEWGQV 681
+LK+ L D +P V + AV + E+ + + A KL+T+ W +
Sbjct: 185 FPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSL---APLFFKLMTS--STNNWVLI 239
Query: 682 FILDSLSNYSPKDDREAQSICERITPRLAHANAAVVL------SAVKVLMKLMEMLPGEG 735
I+ +P + R + + E +T L H+ +A+ L + + VL+ L +P
Sbjct: 240 KIIKLFGALTPLEPRLGKKLIEPLT-NLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHS 298
Query: 736 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRP-DILKHEMKVFFVKYNDPIY 794
+ +KL + + S+ ++Y+ L ++ I++ P + H+ + +
Sbjct: 299 ASIQLCVQKLR---ILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDES 355
Query: 795 VKLEKLDIMIRLASQANIAQV 815
++L LD++ + S+ N+ ++
Sbjct: 356 IRLRALDLLYGMVSKKNLMEI 376
Score = 50 (22.7 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 862 WIIGEYAERIDNADELLESFL 882
WI GE++E + + LE+ L
Sbjct: 487 WICGEFSEHLQGPQQTLEAML 507
>UNIPROTKB|O14617 [details] [associations]
symbol:AP3D1 "AP-3 complex subunit delta-1" species:9606
"Homo sapiens" [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0033365
"protein localization to organelle" evidence=IEA] [GO:0043195
"terminal bouton" evidence=IEA] [GO:0048007 "antigen processing and
presentation, exogenous lipid antigen via MHC class Ib"
evidence=IEA] [GO:0048499 "synaptic vesicle membrane organization"
evidence=IEA] [GO:0051138 "positive regulation of NK T cell
differentiation" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IDA]
[GO:0048490 "anterograde synaptic vesicle transport" evidence=ISS]
[GO:0008089 "anterograde axon cargo transport" evidence=ISS]
[GO:0005215 "transporter activity" evidence=TAS] [GO:0005794 "Golgi
apparatus" evidence=TAS] [GO:0006726 "eye pigment biosynthetic
process" evidence=TAS] [GO:0061088 "regulation of sequestering of
zinc ion" evidence=IMP] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017105 Pfam:PF01602 PIRSF:PIRSF037092 GO:GO:0005794
GO:GO:0006886 GO:GO:0000139 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0030117 GO:GO:0008565
GO:GO:0005215 GO:GO:0010008 GO:GO:0008089 GO:GO:0033365
eggNOG:COG5096 GO:GO:0048490 GO:GO:0048007 GO:GO:0051138 CTD:8943
HOGENOM:HOG000000981 KO:K12396 OMA:VCKLTYL GO:GO:0061088
GO:GO:0048499 InterPro:IPR010474 Pfam:PF06375 EMBL:AF002163
EMBL:U91930 EMBL:AB208804 EMBL:AC005545 EMBL:BC010065 EMBL:AF130042
IPI:IPI00289608 IPI:IPI00411453 IPI:IPI00411677 IPI:IPI00413686
IPI:IPI00719680 RefSeq:NP_001248755.1 RefSeq:NP_003929.4
UniGene:Hs.512815 PDB:4AFI PDBsum:4AFI ProteinModelPortal:O14617
SMR:O14617 IntAct:O14617 STRING:O14617 PhosphoSite:O14617
PaxDb:O14617 PRIDE:O14617 Ensembl:ENST00000345016
Ensembl:ENST00000355272 GeneID:8943 KEGG:hsa:8943 UCSC:uc002luy.3
UCSC:uc002luz.3 UCSC:uc002lva.3 GeneCards:GC19M002101
H-InvDB:HIX0014607 HGNC:HGNC:568 MIM:607246 neXtProt:NX_O14617
PharmGKB:PA24859 HOVERGEN:HBG050520 ChiTaRS:AP3D1 GenomeRNAi:8943
NextBio:33636 ArrayExpress:O14617 Bgee:O14617 CleanEx:HS_AP3D1
Genevestigator:O14617 GermOnline:ENSG00000065000 GO:GO:0006726
Uniprot:O14617
Length = 1153
Score = 170 (64.9 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 62/321 (19%), Positives = 135/321 (42%)
Query: 503 VGKDVS-ALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPL 561
+G D+S A F +++ M K++ YL D+ ++ N KD +
Sbjct: 68 LGYDISWAAF-NIIEVMSASKFTFKRIGYLAASQSFHEGTDVIMLTTNQIRKDLSSPSQY 126
Query: 562 IRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGF 621
+A+ + C + L + + PY+RK A + + K++ + +
Sbjct: 127 DTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPESLRPA-- 184
Query: 622 LDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTEWGQV 681
+LK+ L D +P V + AV + E+ + + A KL+T+ W +
Sbjct: 185 FPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSL---APLFFKLMTS--STNNWVLI 239
Query: 682 FILDSLSNYSPKDDREAQSICERITPRLAHANAAVVL------SAVKVLMKLMEMLPGEG 735
I+ +P + R + + E +T L H+ +A+ L + + VL+ L +P
Sbjct: 240 KIIKLFGALTPLEPRLGKKLIEPLT-NLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHS 298
Query: 736 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRP-DILKHEMKVFFVKYNDPIY 794
+ +KL + + S+ ++Y+ L ++ I++ P + H+ + +
Sbjct: 299 ASIQLCVQKLR---ILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDKDES 355
Query: 795 VKLEKLDIMIRLASQANIAQV 815
++L LD++ + S+ N+ ++
Sbjct: 356 IRLRALDLLYGMVSKKNLMEI 376
Score = 47 (21.6 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 862 WIIGEYAERIDNADELLESFL 882
WI GE++E + LE+ L
Sbjct: 487 WICGEFSEHLQEPHHTLEAML 507
>FB|FBgn0001087 [details] [associations]
symbol:g "garnet" species:7227 "Drosophila melanogaster"
[GO:0006726 "eye pigment biosynthetic process"
evidence=IEP;IMP;IDA] [GO:0006727 "ommochrome biosynthetic process"
evidence=IMP] [GO:0008055 "ocellus pigment biosynthetic process"
evidence=IDA] [GO:0008057 "eye pigment granule organization"
evidence=IMP] [GO:0030131 "clathrin adaptor complex" evidence=ISS]
[GO:0030123 "AP-3 adaptor complex" evidence=NAS] [GO:0005798
"Golgi-associated vesicle" evidence=NAS] [GO:0006895 "Golgi to
endosome transport" evidence=NAS] [GO:0007041 "lysosomal transport"
evidence=TAS] [GO:0007040 "lysosome organization" evidence=ISS]
[GO:0005795 "Golgi stack" evidence=IDA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0046907 "intracellular transport"
evidence=TAS] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0048072 "compound eye pigmentation" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0007220 "Notch receptor processing" evidence=IMP] [GO:0006897
"endocytosis" evidence=IMP] [GO:0005770 "late endosome"
evidence=IDA] [GO:0060967 "negative regulation of gene silencing by
RNA" evidence=IMP] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017105 Pfam:PF01602 PIRSF:PIRSF037092 GO:GO:0005783
GO:GO:0008340 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 PROSITE:PS50077 GO:GO:0008565 EMBL:AE014298
GO:GO:0005795 GO:GO:0006897 GO:GO:0007040 GO:GO:0005770
GO:GO:0005798 GO:GO:0007220 eggNOG:COG5096 GO:GO:0030665
GO:GO:0006895 GO:GO:0007041 GO:GO:0030123 KO:K12396
InterPro:IPR010474 Pfam:PF06375 EMBL:AF002164 EMBL:AF044287
EMBL:U31351 RefSeq:NP_524785.2 ProteinModelPortal:P54362 SMR:P54362
IntAct:P54362 MINT:MINT-948300 STRING:P54362 PaxDb:P54362
GeneID:44819 KEGG:dme:Dmel_CG10986 UCSC:CG10986-RB CTD:44819
FlyBase:FBgn0001087 InParanoid:P54362 OrthoDB:EOG4RJDGF ChiTaRS:g
GenomeRNAi:44819 NextBio:837685 Bgee:P54362 GermOnline:CG10986
GO:GO:0048072 GO:GO:0008057 GO:GO:0060967 GO:GO:0006727
Uniprot:P54362
Length = 1034
Score = 162 (62.1 bits), Expect = 7.7e-08, P = 7.7e-08
Identities = 63/332 (18%), Positives = 139/332 (41%)
Query: 493 LTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPD--MAIMAVNT 550
+ +L M +G D+S +++ M + K++ YL HPD + ++ N
Sbjct: 60 VAKLTYIQM-LGYDISWAGFNIIEVMSSSRFTCKRIGYLAASQCF--HPDSELLMLTTNM 116
Query: 551 FVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYD 610
KD N +A+ + C ++ L + + PY+R A + + K++
Sbjct: 117 IRKDLNSQNQYDAGVALSGLSCFISPDLSRDLANDIMTLMSSTKPYLRMKAVLMMYKVFL 176
Query: 611 INAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLT 670
+ + +LK+ L D +P V + AV + E+ + + A KL+T
Sbjct: 177 RYPEALRPA--FPKLKEKLEDPDPGVQSAAVNVICELARKNPKNYLPL---APIFFKLMT 231
Query: 671 ALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVL------SAVKVL 724
W + I+ +P + R + + E +T L H+ +A+ L + + VL
Sbjct: 232 T--STNNWMLIKIIKLFGALTPLEPRLGKKLIEPLT-NLIHSTSAMSLLYECINTVIAVL 288
Query: 725 MKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKV 784
+ + +P + +KL + + S+ ++Y+ L ++ I++ P ++ +
Sbjct: 289 ISISSGMPNHSASIQLCVQKLR---ILIEDSDQNLKYLGLLAMSKILKTHPKSVQAHKDL 345
Query: 785 FFVKYNDPIY-VKLEKLDIMIRLASQANIAQV 815
+D ++L LD++ + S+ N+ ++
Sbjct: 346 ILACLDDKDESIRLRALDLLYGMVSKKNLMEI 377
>WB|WBGene00000162 [details] [associations]
symbol:apd-3 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017105 Pfam:PF01602 PIRSF:PIRSF037092 GO:GO:0009792
GO:GO:0005794 GO:GO:0040007 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0002119 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 GO:GO:0010171 eggNOG:COG5096
GeneTree:ENSGT00550000075067 HOGENOM:HOG000000981 KO:K12396
InterPro:IPR010474 Pfam:PF06375 EMBL:FO081774 RefSeq:NP_494570.1
ProteinModelPortal:O16637 STRING:O16637 PaxDb:O16637 PRIDE:O16637
EnsemblMetazoa:W09G10.4a.1 EnsemblMetazoa:W09G10.4a.2 GeneID:173701
KEGG:cel:CELE_W09G10.4 UCSC:W09G10.4a CTD:173701 WormBase:W09G10.4a
InParanoid:O16637 OMA:ERACCAL NextBio:880723 ArrayExpress:O16637
Uniprot:O16637
Length = 1251
Score = 155 (59.6 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 61/334 (18%), Positives = 138/334 (41%)
Query: 485 NTFYILLH-LTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDM 543
++ Y+ + + +L M +G D+S +V+ M + K++ YL D+
Sbjct: 50 DSIYVKANAIEKLAYLQM-LGYDISWASFNVIEVMASTKYTEKRIGYLAAAQSFHDETDV 108
Query: 544 AIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAV 603
++ N KD SN +A+ + C + L + L Y RK A +
Sbjct: 109 LMLTTNLIRKDVNSSNMYESGIALGGLSCFVTPDLARDLAADVVNLLSCSRNYTRKRAVL 168
Query: 604 CVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQ 663
+ K++ + +LK+ L D +P V ++AV + E+ + + A
Sbjct: 169 LLYKIFLKYPDALRPT--FPRLKEKLEDPDPGVQSSAVNVICELARKNPKNYLTL---AP 223
Query: 664 TINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVL-SAVK 722
KL+T + W + I+ P + R + + E +T + +A +L +
Sbjct: 224 VFFKLMTTSSN--NWMLIKIIKLFGALVPLEPRLGKKLLEPLTNLINSTSAMSLLYECIN 281
Query: 723 VLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEM 782
++ ++ + GD +++ + V + S+ ++Y+ L + I++ P ++
Sbjct: 282 TVIAVLISISAGGDHTASIQLCVQKLGVLIEDSDQNLKYLGLLAMGKILKTHPKAVQAHK 341
Query: 783 KVFFVKYNDPIY-VKLEKLDIMIRLASQANIAQV 815
+ +D +++ LD++ + S+ NI ++
Sbjct: 342 DIVLRCLDDKDESIRIRSLDLLYGMVSKKNIVEI 375
Score = 59 (25.8 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 855 EARASMIWIIGEYAERIDNADELLESFLE 883
E + WI GEY++ + N +LES L+
Sbjct: 481 EVLLAAAWICGEYSQHVRNQQGVLESMLK 509
>UNIPROTKB|H3BNR4 [details] [associations]
symbol:AP1G1 "AP-1 complex subunit gamma-1" species:9606
"Homo sapiens" [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017107 Pfam:PF01602 GO:GO:0005794 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 PANTHER:PTHR22780:SF5 EMBL:AC009097
EMBL:AC010653 HGNC:HGNC:555 ChiTaRS:AP1G1 ProteinModelPortal:H3BNR4
SMR:H3BNR4 Ensembl:ENST00000568327 Bgee:H3BNR4 Uniprot:H3BNR4
Length = 236
Score = 147 (56.8 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 51/211 (24%), Positives = 95/211 (45%)
Query: 447 PTDTQELVQQVLSLATQDSDNPDL-RDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGK 505
P +EL++ + + TQ + + ++ I NT Y ++ +L+ M +G
Sbjct: 4 PIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNT-YRCRNVAKLLYMHM-LGY 61
Query: 506 DVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRAL 565
+ + + + K++ YL M D+ ++ N D S ++ L
Sbjct: 62 PAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGL 121
Query: 566 AVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQL 625
A+ T+GC+ ++ L + K LK + Y+RK AA+C + +L+E FL
Sbjct: 122 ALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPAT 179
Query: 626 KDLLSDSNPMVVANAVAALSEMNEASTSGVA 656
K+LL++ N V+ +V L+EM E S +A
Sbjct: 180 KNLLNEKNHGVLHTSVVLLTEMCERSPDMLA 210
>UNIPROTKB|E1BR25 [details] [associations]
symbol:AP4E1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 Pfam:PF01602 Pfam:PF07718
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 GeneTree:ENSGT00390000012618
GO:GO:0030126 InterPro:IPR017109 PANTHER:PTHR22780:SF6
EMBL:AADN02045349 EMBL:AADN02045350 IPI:IPI00570896
Ensembl:ENSGALT00000007625 ArrayExpress:E1BR25 Uniprot:E1BR25
Length = 1139
Score = 170 (64.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 78/396 (19%), Positives = 182/396 (45%)
Query: 453 LVQQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYILLH--LTRLVIASMTVGKDVSAL 510
L++ + +L ++ + ++ ++S T L+ + RL+ M +G + S
Sbjct: 43 LIRNITALTSKHEEEKLIQQEITSLKAMVSAPTTSLRLMKECMVRLIYCEM-LGYESSFG 101
Query: 511 FPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRALAVRTM 570
+ + Q NL K++ YL + + + ++ ++ VNT VKD + +N + ++A+ +
Sbjct: 102 YIHAIKLAQQGNLLEKRVGYLAVSLFLHENHELLLLLVNTVVKDLQSTNLVEVSMALTIV 161
Query: 571 GCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLS 630
I ++ + + L+ +R+ A + K Y I V Q D+ + L
Sbjct: 162 SQIFPREMIPAVLPLIEDKLQHSKEIIRRKAVQALYKFYLIAPNQV--QHIHDKFRKALC 219
Query: 631 DSNPMVVANAVAALSEMNEASTSGV-----ALIEMNAQTIN-KLLTALNECT---EWGQV 681
D + V+A ++ EM + ++SG + + + Q + KL N + W Q+
Sbjct: 220 DRDVGVMAASLHIYLEMIKENSSGYKDLTESFVIILKQVVGGKLPIDFNYHSVPAPWLQI 279
Query: 682 FILDSLSNYSPKDDREAQSICERITPRLAHA--NAAVVLSAVKVLMKLMEMLPGEGDFVS 739
+L L D+R ++ + + + L A N + + + ++ + + + + +
Sbjct: 280 QLLRILGLLGKDDNRTSELMYDVLEESLRRAEINHNITYAILFECVQTIYTIYPKSELLE 339
Query: 740 TLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDI-LKHEMKVF-FVKYNDPIYVKL 797
K + +LS + ++Y+ L+ + ++Q+ P++ L+H+M + + + DPI +K
Sbjct: 340 KAAKCIGK---FVLSPQINLKYLGLKALTCVIQQDPNLALEHQMTIIECLDHPDPI-IKR 395
Query: 798 EKLDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKY 833
E L+I+ R+ + N+ +VQ+ + +K+ +Y
Sbjct: 396 ETLEILYRITNGHNVV---VIVQKMLDYLKETREEY 428
Score = 41 (19.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 860 MIWIIGEYAERIDNAD 875
M W++GEY+ + D
Sbjct: 518 MSWVLGEYSSLATDVD 533
>UNIPROTKB|E1BR26 [details] [associations]
symbol:AP4E1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 Pfam:PF01602 Pfam:PF07718
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 GeneTree:ENSGT00390000012618
OMA:KYAPDNA GO:GO:0030126 InterPro:IPR017109 PANTHER:PTHR22780:SF6
EMBL:AADN02045349 EMBL:AADN02045350 IPI:IPI00575379
Ensembl:ENSGALT00000007624 ArrayExpress:E1BR26 Uniprot:E1BR26
Length = 1144
Score = 170 (64.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 78/396 (19%), Positives = 182/396 (45%)
Query: 453 LVQQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYILLH--LTRLVIASMTVGKDVSAL 510
L++ + +L ++ + ++ ++S T L+ + RL+ M +G + S
Sbjct: 43 LIRNITALTSKHEEEKLIQQEITSLKAMVSAPTTSLRLMKECMVRLIYCEM-LGYESSFG 101
Query: 511 FPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRALAVRTM 570
+ + Q NL K++ YL + + + ++ ++ VNT VKD + +N + ++A+ +
Sbjct: 102 YIHAIKLAQQGNLLEKRVGYLAVSLFLHENHELLLLLVNTVVKDLQSTNLVEVSMALTIV 161
Query: 571 GCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLS 630
I ++ + + L+ +R+ A + K Y I V Q D+ + L
Sbjct: 162 SQIFPREMIPAVLPLIEDKLQHSKEIIRRKAVQALYKFYLIAPNQV--QHIHDKFRKALC 219
Query: 631 DSNPMVVANAVAALSEMNEASTSGV-----ALIEMNAQTIN-KLLTALNECT---EWGQV 681
D + V+A ++ EM + ++SG + + + Q + KL N + W Q+
Sbjct: 220 DRDVGVMAASLHIYLEMIKENSSGYKDLTESFVIILKQVVGGKLPIDFNYHSVPAPWLQI 279
Query: 682 FILDSLSNYSPKDDREAQSICERITPRLAHA--NAAVVLSAVKVLMKLMEMLPGEGDFVS 739
+L L D+R ++ + + + L A N + + + ++ + + + + +
Sbjct: 280 QLLRILGLLGKDDNRTSELMYDVLEESLRRAEINHNITYAILFECVQTIYTIYPKSELLE 339
Query: 740 TLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDI-LKHEMKVF-FVKYNDPIYVKL 797
K + +LS + ++Y+ L+ + ++Q+ P++ L+H+M + + + DPI +K
Sbjct: 340 KAAKCIGK---FVLSPQINLKYLGLKALTCVIQQDPNLALEHQMTIIECLDHPDPI-IKR 395
Query: 798 EKLDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKY 833
E L+I+ R+ + N+ +VQ+ + +K+ +Y
Sbjct: 396 ETLEILYRITNGHNVV---VIVQKMLDYLKETREEY 428
Score = 41 (19.5 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 860 MIWIIGEYAERIDNAD 875
M W++GEY+ + D
Sbjct: 518 MSWVLGEYSSLATDVD 533
>POMBASE|SPBC146.14c [details] [associations]
symbol:sec26 "coatomer beta subunit (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006886 "intracellular protein transport"
evidence=IC] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0030134 "ER to Golgi transport vesicle" evidence=IC]
InterPro:IPR002553 InterPro:IPR011710 InterPro:IPR016024
InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727
PomBase:SPBC146.14c GO:GO:0005829 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0005198
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006888
eggNOG:COG5096 GO:GO:0030126 GO:GO:0030134 HOGENOM:HOG000207417
PANTHER:PTHR10635 OMA:DFEWENK PIR:T39428 RefSeq:NP_595403.1
ProteinModelPortal:Q9UUF7 STRING:Q9UUF7 EnsemblFungi:SPBC146.14c.1
GeneID:2539798 KEGG:spo:SPBC146.14c OrthoDB:EOG483HCN
NextBio:20800947 Uniprot:Q9UUF7
Length = 940
Score = 146 (56.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 79/347 (22%), Positives = 151/347 (43%)
Query: 488 YILLHLTRLVIASMTVGKDVSALFPDVVN-CMQTDNLELKKLVYLYLMNYAKSHPDMA-- 544
Y+ + + ++ + G + ++ V+ M + N ELKKL+Y Y K + D
Sbjct: 30 YVKISAMKTILRVVINGDSLPSILMHVIRFVMPSRNKELKKLLYYYWEVCPKYNNDGTMK 89
Query: 545 ---IMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTA 601
I+A N+F D + N IR +R + ++ ++ + L +R+CL+ YVRK A
Sbjct: 90 QEMILACNSFRNDLQHPNEFIRGATLRFLCKLKEPELLDPLIPTVRQCLEHRHAYVRKNA 149
Query: 602 AVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMN 661
+ V +Y ++ L+ D L + L ++S NA+ L ++ A + N
Sbjct: 150 ILAVFSIYQVSNHLIPDAASLAE-DFLAAESEGTCKRNALIVLFTIDPEKAK--AWLLAN 206
Query: 662 AQTINKL-LTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSA 720
+ I L ++L E+ + +L + QS+ +T A N++VV A
Sbjct: 207 FEQIPSLNASSLLVIIEFIRKVVLTKADGL---EKLRFQSLLVSLT---ATNNSSVVFEA 260
Query: 721 VKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPE--VQYVALRNINLIVQKRPDIL 778
++ + P D S K A L+ L E + + + L I+ + + IL
Sbjct: 261 AT---SVINVFP---DAESL--KLAASRLLALADREADNNAKLIMLDRISQLAARDKSIL 312
Query: 779 KHEMK--VFFVKYNDPIYVKLEK-LDIMIRLASQANIAQV-NYVVQE 821
+ + + F+ +D + EK + I++ L S N+ + N+ +E
Sbjct: 313 EDLITDVIPFLSSSD--FDVCEKAISIIMGLVSSRNVEDILNHFQKE 357
Score = 94 (38.1 bits), Expect = 0.00043, Sum P(5) = 0.00043
Identities = 22/78 (28%), Positives = 39/78 (50%)
Query: 115 CSSVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVC 174
C+S F D + N IR +R + ++ ++ + L +R+CL+ YVRK A +
Sbjct: 96 CNS---FRNDLQHPNEFIRGATLRFLCKLKEPELLDPLIPTVRQCLEHRHAYVRKNAILA 152
Query: 175 VAKLYDINAQLVEDQGFL 192
V +Y ++ L+ D L
Sbjct: 153 VFSIYQVSNHLIPDAASL 170
Score = 73 (30.8 bits), Expect = 0.00043, Sum P(5) = 0.00043
Identities = 41/170 (24%), Positives = 76/170 (44%)
Query: 285 KKLAPPLVTLLSSEPE--VQYVALRNINLIVQKRPDILKHEMK--VFFVKYNDPIYVKLE 340
K A L+ L E + + + L I+ + + IL+ + + F+ +D + E
Sbjct: 275 KLAASRLLALADREADNNAKLIMLDRISQLAARDKSILEDLITDVIPFLSSSD--FDVCE 332
Query: 341 K-LDIMIRLASQANIAQVLSEL-KEYA-----TEVDVDFVRKAV-RAIGRCAIKVEQSAE 392
K + I++ L S N+ +L+ KE TE D D R+A+ +AI CAI +A
Sbjct: 333 KAISIIMGLVSSRNVEDILNHFQKELTKSNGETEKD-DGRRRALTKAIHSCAINFPHTAA 391
Query: 393 RCVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKL 442
+ LL I ++ + ++ +E F D + +LL ++ +L
Sbjct: 392 TAIQYLLSHISDFQSKSASSVLSFIKEVMEKFPDLRSSNITKLLLSLKEL 441
Score = 63 (27.2 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 826 IKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEY 867
IK++ K+P+ + I+ L +L L + +IWI GEY
Sbjct: 416 IKEVMEKFPDLRSSNITKLLLSLKELRAGKIFRGVIWIAGEY 457
Score = 47 (21.6 bits), Expect = 0.00043, Sum P(5) = 0.00043
Identities = 15/56 (26%), Positives = 23/56 (41%)
Query: 18 LKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVN-CMQTDNLELKKLVYLY 72
LK L S + + G + ++ V+ M + N ELKKL+Y Y
Sbjct: 20 LKTSLESKNDYVKISAMKTILRVVINGDSLPSILMHVIRFVMPSRNKELKKLLYYY 75
Score = 45 (20.9 bits), Expect = 0.00043, Sum P(5) = 0.00043
Identities = 12/51 (23%), Positives = 26/51 (50%)
Query: 758 EVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIY----VKLEKLDIMI 804
E + N ++V+ L H +++ + DP+Y VK+++ DI++
Sbjct: 693 ESDIIQATNDGMVVEDLASKLDHIVQL--AGFTDPVYCEAYVKIQQFDIIL 741
Score = 43 (20.2 bits), Expect = 0.00043, Sum P(5) = 0.00043
Identities = 16/63 (25%), Positives = 27/63 (42%)
Query: 564 ALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLD 623
A+ + R++ + PLR + D Y+ A + KL A+L D+ L+
Sbjct: 524 AVTSEALSAARLEAVKASKKPPLRTQILSGDYYLAAVLASALTKLVMRFARLSFDKERLN 583
Query: 624 QLK 626
LK
Sbjct: 584 ALK 586
>UNIPROTKB|E9PU39 [details] [associations]
symbol:Ap1g1 "Protein Ap1g1" species:10116 "Rattus
norvegicus" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0044431 "Golgi apparatus part" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 RGD:619785 GO:GO:0048471
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0008565 GO:GO:0030136 GO:GO:0055037
GO:GO:0005802 GO:GO:0030131 SUPFAM:SSF49348 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 GO:GO:0044431 IPI:IPI00951607
PRIDE:E9PU39 Ensembl:ENSRNOT00000021419 ArrayExpress:E9PU39
Uniprot:E9PU39
Length = 825
Score = 158 (60.7 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 59/250 (23%), Positives = 109/250 (43%)
Query: 447 PTDTQELVQQVLSLATQDSDNPDL-RDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGK 505
P +EL++ + + TQ + + ++ I NT Y ++ +L+ M +G
Sbjct: 4 PIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNT-YRCRNVAKLLYMHM-LGY 61
Query: 506 DVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRAL 565
+ + + + K++ YL M D+ ++ N D S ++ L
Sbjct: 62 PAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGL 121
Query: 566 AVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQL 625
A+ T+GC+ ++ L + K LK + Y+RK AA+C + +L+E FL
Sbjct: 122 ALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPAT 179
Query: 626 KDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTEWGQVFILD 685
K+LL++ N V+ +V L+EM E S +A N + + +L+ L
Sbjct: 180 KNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKNEKLVPQLVRILKNLI--------- 230
Query: 686 SLSNYSPKDD 695
+S YSP+ D
Sbjct: 231 -MSGYSPEHD 239
Score = 103 (41.3 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 34/139 (24%), Positives = 61/139 (43%)
Query: 67 KLVYLYLMNYAKSHPDMAIMAF--STFFYQKSSSSFQCMIDIRSIPLFDLCSSVGVFVKD 124
KL+Y++++ Y + + S F K M+ + L + D
Sbjct: 52 KLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMT-NCIKND 110
Query: 125 CEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 184
S ++ LA+ T+GC+ ++ L + K LK + Y+RK AA+C + +
Sbjct: 111 LNHSTQFVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPE 170
Query: 185 LVEDQGFLDQLKDLLSDSN 203
L+E FL K+LL++ N
Sbjct: 171 LMEM--FLPATKNLLNEKN 187
Score = 74 (31.1 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 31/159 (19%), Positives = 71/159 (44%)
Query: 294 LLSSEPEVQYVALRNINLIVQKRPD-ILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQA 352
LL+++ ++YVAL ++ VQ + + +H + + + +K +++ L +
Sbjct: 320 LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGN 379
Query: 353 NIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQT--KYA--E 408
NI ++ EL + + +F + A K S + T++ ++ T Y +
Sbjct: 380 NIRGMMKELLYFLDSCEPEFKADCASGVFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDD 439
Query: 409 RIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRP 447
+ N +L+ + +E H Q +L AI+ + ++P
Sbjct: 440 AVPNLIQLITNSVE-MHAYTVQ---RLYKAILGDYSQQP 474
Score = 48 (22.0 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 35/164 (21%), Positives = 68/164 (41%)
Query: 658 IEMNAQTINKLLTA-LNECTEWGQVFILD-SLSNYSPKDDREAQSICERITP-RLAHANA 714
+EM+A T+ +L A L + ++ V + + Y D CE P ++
Sbjct: 452 VEMHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYG---DLLVSGQCEEEEPIQVTEDEV 508
Query: 715 AVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKR 774
+L +V L+ M G + T KL+ ++ +V + +I++ +Q+R
Sbjct: 509 LDILESV--LISNMSTSVTRG-YALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQR 565
Query: 775 PDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQ--ANIAQVN 816
E F KY+ LE++ +M ++ + + I Q N
Sbjct: 566 AV----EYNALFKKYDHMRSALLERMPVMEKVTTNGPSEIVQTN 605
Score = 37 (18.1 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 14/72 (19%), Positives = 32/72 (44%)
Query: 800 LDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENL--DTLDEPEAR 857
+D ++R+ + A +YV +A+ + + + + L + + D +P +
Sbjct: 422 IDTIMRVLTTAG----SYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQ 477
Query: 858 ASMIWIIGEYAE 869
+ W IGEY +
Sbjct: 478 VAA-WCIGEYGD 488
>GENEDB_PFALCIPARUM|PF11_0463 [details] [associations]
symbol:PF11_0463 "coat protein, gamma subunit,
putative" species:5833 "Plasmodium falciparum" [GO:0005829
"cytosol" evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0005829 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126 EMBL:AE014186
HOGENOM:HOG000184434 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 RefSeq:XP_001348130.1
ProteinModelPortal:Q8IHR6 PRIDE:Q8IHR6
EnsemblProtists:PF11_0463:mRNA GeneID:811006 KEGG:pfa:PF11_0463
EuPathDB:PlasmoDB:PF3D7_1145100 OMA:EDVEYSP ProtClustDB:CLSZ2433713
Uniprot:Q8IHR6
Length = 1068
Score = 141 (54.7 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 42/200 (21%), Positives = 97/200 (48%)
Query: 481 LSTGNTFYILLHLTRLVIAS--MTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAK 538
L+T IL + L+ + ++ + +F + Q++N L++++YL + N
Sbjct: 50 LNTQKCLQILTKILYLINKGDDILTSQECTDIFFSITKLFQSNNERLRRMIYLLIKNLPV 109
Query: 539 SHPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVR 598
S ++ I+ ++ KD +N RA A+R + I + + L+ + D +P+V
Sbjct: 110 SEKEIFIVT-SSLTKDMNSANDCYRANAIRVLSKIIDFSLATQIERYLKTAVVDRNPFVS 168
Query: 599 KTAAVCVAKLYD-INAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVAL 657
+A +C LY+ ++ +V+ +++++ + ++ +PM+ +A+ L + +
Sbjct: 169 TSALLCGLNLYNNTSSDIVKK--WINEVSECINSKHPMIQFHALTLLCSIKNQDKLALEK 226
Query: 658 IEMNAQTINK--LLTALNEC 675
I +N+ T N L ++L C
Sbjct: 227 I-INSYTKNSHTLSSSLANC 245
Score = 67 (28.6 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 31/138 (22%), Positives = 65/138 (47%)
Query: 752 LLSSEPEVQYVALRNINLIVQKRPDIL-KHEMKVFFVKYNDPIYVKLEKLDIMIRLASQA 810
LLSS+ ++ +R IN + RP ++ K + + Y++ + + +++ ++
Sbjct: 410 LLSSKIVDKFSIIRQINKLAHHRPYVVSKLNQDIENLLYDNNKSICVLAFTTLLKTGNET 469
Query: 811 NIAQV-----NYVVQE----AIVVIKDIFRK---YPNKYETIISTLCENLDTLDEPEARA 858
+I ++ NY+ + I +I+++ YPNK I++ L NL + + +A
Sbjct: 470 SIDKLLNQINNYMTADNTTFKIKIIEEVKNLCFIYPNKCNIILNFLSNNLRDDESYQFKA 529
Query: 859 SMIWIIGEYAERIDNADE 876
S I I + NA+E
Sbjct: 530 STIDSIILIITNLPNAEE 547
Score = 41 (19.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 829 IFRKYPNKYETIISTLCENLD 849
I PN ET I LCE ++
Sbjct: 538 IITNLPNAEETAILQLCEFIE 558
>UNIPROTKB|Q8IHR6 [details] [associations]
symbol:PF11_0463 "Coatomer subunit gamma" species:36329
"Plasmodium falciparum 3D7" [GO:0005829 "cytosol" evidence=ISS]
[GO:0016192 "vesicle-mediated transport" evidence=ISS]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 GO:GO:0005829
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 SUPFAM:SSF55711 SUPFAM:SSF49348
Gene3D:3.30.310.30 GO:GO:0030126 EMBL:AE014186 HOGENOM:HOG000184434
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 RefSeq:XP_001348130.1 ProteinModelPortal:Q8IHR6
PRIDE:Q8IHR6 EnsemblProtists:PF11_0463:mRNA GeneID:811006
KEGG:pfa:PF11_0463 EuPathDB:PlasmoDB:PF3D7_1145100 OMA:EDVEYSP
ProtClustDB:CLSZ2433713 Uniprot:Q8IHR6
Length = 1068
Score = 141 (54.7 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 42/200 (21%), Positives = 97/200 (48%)
Query: 481 LSTGNTFYILLHLTRLVIAS--MTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAK 538
L+T IL + L+ + ++ + +F + Q++N L++++YL + N
Sbjct: 50 LNTQKCLQILTKILYLINKGDDILTSQECTDIFFSITKLFQSNNERLRRMIYLLIKNLPV 109
Query: 539 SHPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVR 598
S ++ I+ ++ KD +N RA A+R + I + + L+ + D +P+V
Sbjct: 110 SEKEIFIVT-SSLTKDMNSANDCYRANAIRVLSKIIDFSLATQIERYLKTAVVDRNPFVS 168
Query: 599 KTAAVCVAKLYD-INAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVAL 657
+A +C LY+ ++ +V+ +++++ + ++ +PM+ +A+ L + +
Sbjct: 169 TSALLCGLNLYNNTSSDIVKK--WINEVSECINSKHPMIQFHALTLLCSIKNQDKLALEK 226
Query: 658 IEMNAQTINK--LLTALNEC 675
I +N+ T N L ++L C
Sbjct: 227 I-INSYTKNSHTLSSSLANC 245
Score = 67 (28.6 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 31/138 (22%), Positives = 65/138 (47%)
Query: 752 LLSSEPEVQYVALRNINLIVQKRPDIL-KHEMKVFFVKYNDPIYVKLEKLDIMIRLASQA 810
LLSS+ ++ +R IN + RP ++ K + + Y++ + + +++ ++
Sbjct: 410 LLSSKIVDKFSIIRQINKLAHHRPYVVSKLNQDIENLLYDNNKSICVLAFTTLLKTGNET 469
Query: 811 NIAQV-----NYVVQE----AIVVIKDIFRK---YPNKYETIISTLCENLDTLDEPEARA 858
+I ++ NY+ + I +I+++ YPNK I++ L NL + + +A
Sbjct: 470 SIDKLLNQINNYMTADNTTFKIKIIEEVKNLCFIYPNKCNIILNFLSNNLRDDESYQFKA 529
Query: 859 SMIWIIGEYAERIDNADE 876
S I I + NA+E
Sbjct: 530 STIDSIILIITNLPNAEE 547
Score = 41 (19.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 9/21 (42%), Positives = 11/21 (52%)
Query: 829 IFRKYPNKYETIISTLCENLD 849
I PN ET I LCE ++
Sbjct: 538 IITNLPNAEETAILQLCEFIE 558
>UNIPROTKB|G3MZH4 [details] [associations]
symbol:AP1G1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0055037 "recycling endosome" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0030136
"clathrin-coated vesicle" evidence=IEA] [GO:0019894 "kinesin
binding" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=IEA] [GO:0044431 "Golgi apparatus part" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0048471 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030136 GO:GO:0055037 GO:GO:0005802
GO:GO:0030131 SUPFAM:SSF49348 KO:K12391 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 CTD:164
GeneTree:ENSGT00390000012618 GO:GO:0044431 OMA:DCASGVF
EMBL:DAAA02046759 UniGene:Bt.3110 NextBio:20868171
RefSeq:NP_001178365.1 PRIDE:G3MZH4 Ensembl:ENSBTAT00000065037
GeneID:507677 KEGG:bta:507677 Uniprot:G3MZH4
Length = 825
Score = 157 (60.3 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 59/250 (23%), Positives = 109/250 (43%)
Query: 447 PTDTQELVQQVLSLATQDSDNPDL-RDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGK 505
P +EL++ + + TQ + + ++ I NT Y ++ +L+ M +G
Sbjct: 4 PIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNT-YRCRNVAKLLYMHM-LGY 61
Query: 506 DVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRAL 565
+ + + + K++ YL M D+ ++ N D S ++ L
Sbjct: 62 PAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGL 121
Query: 566 AVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQL 625
A+ T+GC+ ++ L + K LK + Y+RK AA+C + +L+E FL
Sbjct: 122 ALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPAT 179
Query: 626 KDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTEWGQVFILD 685
K+LL++ N V+ +V L+EM E S +A N + + +L+ L
Sbjct: 180 KNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKNEKLVPQLVRILKNLI--------- 230
Query: 686 SLSNYSPKDD 695
+S YSP+ D
Sbjct: 231 -MSGYSPEHD 239
Score = 102 (41.0 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 34/139 (24%), Positives = 61/139 (43%)
Query: 67 KLVYLYLMNYAKSHPDMAIMAF--STFFYQKSSSSFQCMIDIRSIPLFDLCSSVGVFVKD 124
KL+Y++++ Y + + S F K M+ + L + D
Sbjct: 52 KLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMT-NCIKND 110
Query: 125 CEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 184
S ++ LA+ T+GC+ ++ L + K LK + Y+RK AA+C + +
Sbjct: 111 LNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPE 170
Query: 185 LVEDQGFLDQLKDLLSDSN 203
L+E FL K+LL++ N
Sbjct: 171 LMEM--FLPATKNLLNEKN 187
Score = 75 (31.5 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 32/159 (20%), Positives = 71/159 (44%)
Query: 294 LLSSEPEVQYVALRNINLIVQKRPD-ILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQA 352
LL+++ ++YVAL ++ VQ + + +H + + + +K +++ L +
Sbjct: 320 LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGN 379
Query: 353 NIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQT--KYA--E 408
NI ++ EL + + +F I A K S + T++ ++ T Y +
Sbjct: 380 NIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDD 439
Query: 409 RIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRP 447
+ N +L+ + +E H Q +L AI+ + ++P
Sbjct: 440 AVPNLIQLITNSVE-MHAYTVQ---RLYKAILGDYSQQP 474
Score = 47 (21.6 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 35/164 (21%), Positives = 67/164 (40%)
Query: 658 IEMNAQTINKLLTA-LNECTEWGQVFILD-SLSNYSPKDDREAQSICERITP-RLAHANA 714
+EM+A T+ +L A L + ++ V + + Y D CE P ++
Sbjct: 452 VEMHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYG---DLLVSGQCEEEEPIQVTEDEV 508
Query: 715 AVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKR 774
+L +V L+ M G + T KL+ ++ +V + +I++ +Q+R
Sbjct: 509 LDILESV--LISNMSTSVTRG-YALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQR 565
Query: 775 PDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQA--NIAQVN 816
E F KY+ LE++ +M ++ + I Q N
Sbjct: 566 AV----EYNALFKKYDHMRSALLERMPVMEKVTTNGPTEIVQTN 605
Score = 37 (18.1 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 14/72 (19%), Positives = 32/72 (44%)
Query: 800 LDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENL--DTLDEPEAR 857
+D ++R+ + A +YV +A+ + + + + L + + D +P +
Sbjct: 422 IDTIMRVLTTAG----SYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQ 477
Query: 858 ASMIWIIGEYAE 869
+ W IGEY +
Sbjct: 478 VAA-WCIGEYGD 488
>ASPGD|ASPL0000012367 [details] [associations]
symbol:AN4207 species:162425 "Emericella nidulans"
[GO:0016197 "endosomal transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0030121 "AP-1 adaptor complex" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR016024
InterPro:IPR017107 Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094
SMART:SM00809 InterPro:IPR013041 InterPro:IPR008153 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 EMBL:BN001302 GO:GO:0030131 SUPFAM:SSF49348
eggNOG:NOG303101 HOGENOM:HOG000210271 KO:K12391 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 GO:GO:0044431
OrthoDB:EOG4X9BRC EMBL:AACD01000068 RefSeq:XP_661811.1
ProteinModelPortal:Q5B5H3 SMR:Q5B5H3 STRING:Q5B5H3
EnsemblFungi:CADANIAT00004455 GeneID:2873629 KEGG:ani:AN4207.2
OMA:DCASGVF Uniprot:Q5B5H3
Length = 839
Score = 160 (61.4 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 77/323 (23%), Positives = 142/323 (43%)
Query: 526 KKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEP 585
K+L YL M + ++ + N+ D SN I L++ T+G I +++ L
Sbjct: 81 KRLGYLGTMLLLDENQEVLTLVTNSLKNDLNHSNQYIVGLSLCTLGNIASVEMSRDLFTE 140
Query: 586 LRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALS 645
+ L +PY+R+ AA+C ++ L E FL++ K+LLSD N V+ + +
Sbjct: 141 VESLLSTANPYIRRKAALCAMRICRKVPDLQEH--FLEKAKNLLSDRNHGVLLCGLTLVI 198
Query: 646 EMNEASTS--GV-ALIEMNAQTINKLLTALNECTEWG---------------QVFILDSL 687
+M EA S G +IEM L+ AL T G QV IL L
Sbjct: 199 DMCEAEESEEGQEGVIEMFRPLAGNLVRALKGLTTSGYAPEHDVSGITDPFVQVKILRLL 258
Query: 688 SNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAP 747
+ D ++ I + + + +++ + + ++ +L E D S L + L
Sbjct: 259 RVLARGDTATSELINDILAQVATNTDSSKNVGNAILYEAVLTILDIEAD--SGL-RVLGV 315
Query: 748 PLVT--LLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDP-IYVKLEKLDIMI 804
++ L + + ++YVAL +N +V P+ ++ DP I ++ LD+
Sbjct: 316 NILGKFLTNKDNNIRYVALNTLNKVVAIEPNAVQRHRNTVLECLRDPDISIRRRALDLSF 375
Query: 805 RLASQANIAQVNYVVQEAIVVIK 827
L +++N V +V+E + ++
Sbjct: 376 MLINESN---VRVLVRELLAFLE 395
Score = 96 (38.9 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 124 DCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINA 183
D SN I L++ T+G I +++ L + L +PY+R+ AA+C ++
Sbjct: 109 DLNHSNQYIVGLSLCTLGNIASVEMSRDLFTEVESLLSTANPYIRRKAALCAMRICRKVP 168
Query: 184 QLVEDQGFLDQLKDLLSDSN 203
L E FL++ K+LLSD N
Sbjct: 169 DLQEH--FLEKAKNLLSDRN 186
Score = 96 (38.9 bits), Expect = 2.6e-05, Sum P(3) = 2.6e-05
Identities = 38/169 (22%), Positives = 76/169 (44%)
Query: 294 LLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDP-IYVKLEKLDIMIRLASQA 352
L + + ++YVAL +N +V P+ ++ DP I ++ LD+ L +++
Sbjct: 322 LTNKDNNIRYVALNTLNKVVAIEPNAVQRHRNTVLECLRDPDISIRRRALDLSFMLINES 381
Query: 353 NIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKYAERIDN 412
N+ ++ EL + D +F IG A + + T+L +++ A
Sbjct: 382 NVRVLVRELLAFLEVADNEFKPTMTTQIGIAADRYAPNKRWHADTILRVLKLAGAYV--- 438
Query: 413 ADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLA 461
+++L SF+ T +LQ + + KL++ D + Q+ L+LA
Sbjct: 439 KEQILSSFVRLIA---TTPELQTYS-VQKLYVSLKED---ISQEGLTLA 480
Score = 41 (19.5 bits), Expect = 7.9e-07, Sum P(2) = 7.9e-07
Identities = 8/21 (38%), Positives = 11/21 (52%)
Query: 862 WIIGEYAERIDNADELLESFL 882
W+IGEY + + E E L
Sbjct: 483 WLIGEYGDNLLRGGEYEEEEL 503
>UNIPROTKB|J3KQU9 [details] [associations]
symbol:AP1G1 "AP-1 complex subunit gamma-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0044431 "Golgi apparatus part" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0030131 SUPFAM:SSF49348 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 EMBL:AC009097 EMBL:AC010653
HGNC:HGNC:555 ChiTaRS:AP1G1 GO:GO:0044431 ProteinModelPortal:J3KQU9
Ensembl:ENST00000423132 Uniprot:J3KQU9
Length = 825
Score = 154 (59.3 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 58/250 (23%), Positives = 109/250 (43%)
Query: 447 PTDTQELVQQVLSLATQDSDNPDL-RDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGK 505
P +EL++ + + TQ + + ++ I NT Y ++ +L+ M +G
Sbjct: 4 PIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNT-YRCRNVAKLLYMHM-LGY 61
Query: 506 DVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRAL 565
+ + + + K++ YL M D+ ++ N D S ++ L
Sbjct: 62 PAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGL 121
Query: 566 AVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQL 625
A+ T+GC+ ++ L + K LK + Y+RK AA+C + +L+E FL
Sbjct: 122 ALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPAT 179
Query: 626 KDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTEWGQVFILD 685
K+LL++ N V+ +V L+EM E S +A ++ + +L+ L
Sbjct: 180 KNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKESKLVPQLVRILKNLI--------- 230
Query: 686 SLSNYSPKDD 695
+S YSP+ D
Sbjct: 231 -MSGYSPEHD 239
Score = 103 (41.3 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 34/139 (24%), Positives = 61/139 (43%)
Query: 67 KLVYLYLMNYAKSHPDMAIMAF--STFFYQKSSSSFQCMIDIRSIPLFDLCSSVGVFVKD 124
KL+Y++++ Y + + S F K M+ + L + D
Sbjct: 52 KLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMT-NCIKND 110
Query: 125 CEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 184
S ++ LA+ T+GC+ ++ L + K LK + Y+RK AA+C + +
Sbjct: 111 LNHSTQFVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPE 170
Query: 185 LVEDQGFLDQLKDLLSDSN 203
L+E FL K+LL++ N
Sbjct: 171 LMEM--FLPATKNLLNEKN 187
Score = 75 (31.5 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 32/159 (20%), Positives = 71/159 (44%)
Query: 294 LLSSEPEVQYVALRNINLIVQKRPD-ILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQA 352
LL+++ ++YVAL ++ VQ + + +H + + + +K +++ L +
Sbjct: 320 LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGN 379
Query: 353 NIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQT--KYA--E 408
NI ++ EL + + +F I A K S + T++ ++ T Y +
Sbjct: 380 NIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDD 439
Query: 409 RIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRP 447
+ N +L+ + +E H Q +L AI+ + ++P
Sbjct: 440 AVPNLIQLITNSVE-MHAYTVQ---RLYKAILGDYSQQP 474
Score = 47 (21.6 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 35/164 (21%), Positives = 67/164 (40%)
Query: 658 IEMNAQTINKLLTA-LNECTEWGQVFILD-SLSNYSPKDDREAQSICERITP-RLAHANA 714
+EM+A T+ +L A L + ++ V + + Y D CE P ++
Sbjct: 452 VEMHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYG---DLLVSGQCEEEEPIQVTEDEV 508
Query: 715 AVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKR 774
+L +V L+ M G + T KL+ ++ +V + +I++ +Q+R
Sbjct: 509 LDILESV--LISNMSTSVTRG-YALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQR 565
Query: 775 PDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQA--NIAQVN 816
E F KY+ LE++ +M ++ + I Q N
Sbjct: 566 AV----EYNALFKKYDHMRSALLERMPVMEKVTTNGPTEIVQTN 605
Score = 37 (18.1 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 14/72 (19%), Positives = 32/72 (44%)
Query: 800 LDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENL--DTLDEPEAR 857
+D ++R+ + A +YV +A+ + + + + L + + D +P +
Sbjct: 422 IDTIMRVLTTAG----SYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQ 477
Query: 858 ASMIWIIGEYAE 869
+ W IGEY +
Sbjct: 478 VAA-WCIGEYGD 488
>UNIPROTKB|F1NDA9 [details] [associations]
symbol:AP1G1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0044431 "Golgi
apparatus part" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=IEA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0030136 "clathrin-coated vesicle" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0055037
"recycling endosome" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0048471 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030136 GO:GO:0055037 GO:GO:0005802
GO:GO:0030131 SUPFAM:SSF49348 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 GeneTree:ENSGT00390000012618
GO:GO:0044431 OMA:DCASGVF EMBL:AADN02054199 IPI:IPI00592100
Ensembl:ENSGALT00000001245 Uniprot:F1NDA9
Length = 820
Score = 146 (56.5 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 51/211 (24%), Positives = 95/211 (45%)
Query: 447 PTDTQELVQQVLSLATQDSDNPDL-RDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGK 505
P +EL++ + + TQ + + ++ I NT Y ++ +L+ M +G
Sbjct: 4 PIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNT-YRCRNVAKLLYMHM-LGY 61
Query: 506 DVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRAL 565
+ + + + K++ YL M D+ ++ N D S ++ L
Sbjct: 62 PAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGL 121
Query: 566 AVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQL 625
A+ T+GC+ ++ L + K LK + Y+RK AA+C + +L+E FL
Sbjct: 122 ALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPAT 179
Query: 626 KDLLSDSNPMVVANAVAALSEMNEASTSGVA 656
K+LL++ N V+ +V L+EM E S +A
Sbjct: 180 KNLLNEKNHGVLHTSVVLLTEMCERSPDMLA 210
Score = 102 (41.0 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 34/139 (24%), Positives = 61/139 (43%)
Query: 67 KLVYLYLMNYAKSHPDMAIMAF--STFFYQKSSSSFQCMIDIRSIPLFDLCSSVGVFVKD 124
KL+Y++++ Y + + S F K M+ + L + D
Sbjct: 52 KLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMT-NCIKND 110
Query: 125 CEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 184
S ++ LA+ T+GC+ ++ L + K LK + Y+RK AA+C + +
Sbjct: 111 LNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPE 170
Query: 185 LVEDQGFLDQLKDLLSDSN 203
L+E FL K+LL++ N
Sbjct: 171 LMEM--FLPATKNLLNEKN 187
Score = 74 (31.1 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 31/159 (19%), Positives = 71/159 (44%)
Query: 294 LLSSEPEVQYVALRNINLIVQKRPD-ILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQA 352
LL+++ ++YVAL ++ VQ + + +H + + + +K +++ L +
Sbjct: 319 LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGN 378
Query: 353 NIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQT--KYA--E 408
N+ ++ EL + + +F I A K S + T++ ++ T Y +
Sbjct: 379 NVRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDD 438
Query: 409 RIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRP 447
+ N +L+ + +E H Q +L AI+ + ++P
Sbjct: 439 AVPNLIQLITNSVE-MHAYTVQ---RLYKAILGDYSQQP 473
Score = 54 (24.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 37/175 (21%), Positives = 72/175 (41%)
Query: 658 IEMNAQTINKLLTA-LNECTEWGQVFILD-SLSNYSPKDDREAQSICERITP-RLAHANA 714
+EM+A T+ +L A L + ++ V + + Y D CE P ++
Sbjct: 451 VEMHAYTVQRLYKAILGDYSQQPLVQVASWCIGEYG---DLLVSGQCEEEEPIQVTEDEV 507
Query: 715 AVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKR 774
+L +V L+ M G + T KL+ ++ +V + +I++ +Q+R
Sbjct: 508 LDILESV--LISNMSASVTRG-YALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQR 564
Query: 775 PDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQA--NIAQVNYVVQEAIVVIK 827
E F KY+ LE++ +M ++ + I Q N + A++ K
Sbjct: 565 AV----EYNALFKKYDHMRPALLERMPVMEKVTTNGPTEIVQTNGETETAVLETK 615
Score = 37 (18.1 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 14/72 (19%), Positives = 32/72 (44%)
Query: 800 LDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENL--DTLDEPEAR 857
+D ++R+ + A +YV +A+ + + + + L + + D +P +
Sbjct: 421 IDTIMRVLTTAG----SYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQ 476
Query: 858 ASMIWIIGEYAE 869
+ W IGEY +
Sbjct: 477 VAS-WCIGEYGD 487
>CGD|CAL0000129 [details] [associations]
symbol:SEC26 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=IEA]
InterPro:IPR002553 InterPro:IPR011710 InterPro:IPR016024
InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727
CGD:CAL0000129 GO:GO:0005886 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0005198
eggNOG:COG5096 GO:GO:0030126 EMBL:AACQ01000055 EMBL:AACQ01000054
HOGENOM:HOG000207417 PANTHER:PTHR10635 RefSeq:XP_717391.1
RefSeq:XP_717483.1 ProteinModelPortal:Q5A6M6 STRING:Q5A6M6
GeneID:3640891 GeneID:3641005 KEGG:cal:CaO19.528
KEGG:cal:CaO19.8161 Uniprot:Q5A6M6
Length = 952
Score = 154 (59.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 71/333 (21%), Positives = 143/333 (42%)
Query: 497 VIASMTVGKDVSALFPDVVN-CMQTDNLELKKLVYLY------LMNYAKSHPDMAIMAVN 549
++ ++ G + L ++ M + N ELKKL+Y Y + K +M I+ N
Sbjct: 42 ILITILNGDPLPDLLMHIIRFVMPSRNKELKKLLYHYWEVCPKMDESGKMRHEM-ILVCN 100
Query: 550 TFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLY 609
+D + N IR +R + ++ ++ E L +R+CL+ YVRK A + ++
Sbjct: 101 AIQRDLQHPNEYIRGNTLRYLTKLKEPELLETLVPNVRQCLEHRHAYVRKNAVFALWSIH 160
Query: 610 DINAQLVEDQGFLDQL--KDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINK 667
++ L D D+L + L +++ + NA L ++N + + I+ N I
Sbjct: 161 KVSDHLAPDA---DELIYRFLYEENDSVCKRNAFVCLGDLNREAA--LQYIQDNISVIET 215
Query: 668 LLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKL 727
L + + + DS+ N + K Q + +T + ++ V+ A L L
Sbjct: 216 LDPLIQ--LAFIEFIKKDSIQNPALK-----QQYAQLMTEIIESSSNVVMYEAANTLTVL 268
Query: 728 ----MEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKH-EM 782
+L FV T++ S+ V+ + L IN + ++ P +L+ +
Sbjct: 269 TSNPQSILLAGNKFVELATRE----------SDNNVKIITLERINQLHKQHPGVLQDLSL 318
Query: 783 KVFFVKYNDPIYVKLEKLDIMIRLASQANIAQV 815
++ V + + VK + LD+ ++ + N+ V
Sbjct: 319 EILRVLSSQDLDVKKKALDVTLQFITTRNVEDV 351
Score = 101 (40.6 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 80/346 (23%), Positives = 150/346 (43%)
Query: 552 VKDC-EDSNPLIRALAVRTMGCIRVDKITEYLC----EPLRKCLKDE-DPYVRKTAAVCV 605
V+ C E + +R AV + I K++++L E + + L +E D ++ A VC+
Sbjct: 137 VRQCLEHRHAYVRKNAVFALWSIH--KVSDHLAPDADELIYRFLYEENDSVCKRNAFVCL 194
Query: 606 AKLY-DINAQLVEDQ-GFLDQLKDLLS---------DS--NPMVVANAVAALSEMNEAST 652
L + Q ++D ++ L L+ DS NP + ++E+ E+S
Sbjct: 195 GDLNREAALQYIQDNISVIETLDPLIQLAFIEFIKKDSIQNPALKQQYAQLMTEIIESS- 253
Query: 653 SGVALIEMNAQTINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSIC-ERITPRLAH 711
S V + E A T+ L + G F+ L+ + + D + I ERI +L
Sbjct: 254 SNVVMYEA-ANTLTVLTSNPQSILLAGNKFV--ELA--TRESDNNVKIITLERIN-QLHK 307
Query: 712 ANAAVV----LSAVKVLMKL-MEMLPGEGDF-VSTLTKKLAPPLVTLLSSEPEVQYVALR 765
+ V+ L ++VL +++ D + +T + +V LL E +Q AL
Sbjct: 308 QHPGVLQDLSLEILRVLSSQDLDVKKKALDVTLQFITTRNVEDVVKLLKKE--LQSTALS 365
Query: 766 NINLIVQKRPDILK--HEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQ-EA 822
N + R ++ H++ + FV+ V +D+++ +IA +N E
Sbjct: 366 NDDKNADYRQLLINAIHQLAIKFVE------VAANVIDLLLD-----SIADLNTTAAYEV 414
Query: 823 IVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYA 868
I +K++ K+P+ + I+ L L + + +W+IGEYA
Sbjct: 415 ITFVKEVVEKFPDLRDAILRRLILALPHVKSGKVFRGALWVIGEYA 460
Score = 97 (39.2 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 34/151 (22%), Positives = 68/151 (45%)
Query: 297 SEPEVQYVALRNINLIVQKRPDILKH-EMKVFFVKYNDPIYVKLEKLDIMIRLASQANIA 355
S+ V+ + L IN + ++ P +L+ +++ V + + VK + LD+ ++ + N+
Sbjct: 290 SDNNVKIITLERINQLHKQHPGVLQDLSLEILRVLSSQDLDVKKKALDVTLQFITTRNVE 349
Query: 356 QVLS----ELKEYATEVD---VDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKYAE 408
V+ EL+ A D D+ + + AI + AIK + A + LLD I
Sbjct: 350 DVVKLLKKELQSTALSNDDKNADYRQLLINAIHQLAIKFVEVAANVIDLLLDSIADLNTT 409
Query: 409 RIDNADELLESFLEGFHDENTQVQLQLLTAI 439
++ +E F D + +L+ A+
Sbjct: 410 AAYEVITFVKEVVEKFPDLRDAILRRLILAL 440
Score = 78 (32.5 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 17/66 (25%), Positives = 33/66 (50%)
Query: 123 KDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDIN 182
+D + N IR +R + ++ ++ E L +R+CL+ YVRK A + ++ ++
Sbjct: 104 RDLQHPNEYIRGNTLRYLTKLKEPELLETLVPNVRQCLEHRHAYVRKNAVFALWSIHKVS 163
Query: 183 AQLVED 188
L D
Sbjct: 164 DHLAPD 169
Score = 47 (21.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 20/78 (25%), Positives = 30/78 (38%)
Query: 1 MTDSKYF-----TTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVV 55
M+DS Y T K + E K L + ++ G + L ++
Sbjct: 1 MSDSGYTLIYEPNTATKVSVNEFKNLLEKGKDDVKVDTMKKILITILNGDPLPDLLMHII 60
Query: 56 N-CMQTDNLELKKLVYLY 72
M + N ELKKL+Y Y
Sbjct: 61 RFVMPSRNKELKKLLYHY 78
>UNIPROTKB|Q5A6M6 [details] [associations]
symbol:SEC26 "Coatomer subunit beta" species:237561
"Candida albicans SC5314" [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR002553 InterPro:IPR011710
InterPro:IPR016024 InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718
PIRSF:PIRSF005727 CGD:CAL0000129 GO:GO:0005886 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0005198 eggNOG:COG5096 GO:GO:0030126 EMBL:AACQ01000055
EMBL:AACQ01000054 HOGENOM:HOG000207417 PANTHER:PTHR10635
RefSeq:XP_717391.1 RefSeq:XP_717483.1 ProteinModelPortal:Q5A6M6
STRING:Q5A6M6 GeneID:3640891 GeneID:3641005 KEGG:cal:CaO19.528
KEGG:cal:CaO19.8161 Uniprot:Q5A6M6
Length = 952
Score = 154 (59.3 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 71/333 (21%), Positives = 143/333 (42%)
Query: 497 VIASMTVGKDVSALFPDVVN-CMQTDNLELKKLVYLY------LMNYAKSHPDMAIMAVN 549
++ ++ G + L ++ M + N ELKKL+Y Y + K +M I+ N
Sbjct: 42 ILITILNGDPLPDLLMHIIRFVMPSRNKELKKLLYHYWEVCPKMDESGKMRHEM-ILVCN 100
Query: 550 TFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLY 609
+D + N IR +R + ++ ++ E L +R+CL+ YVRK A + ++
Sbjct: 101 AIQRDLQHPNEYIRGNTLRYLTKLKEPELLETLVPNVRQCLEHRHAYVRKNAVFALWSIH 160
Query: 610 DINAQLVEDQGFLDQL--KDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINK 667
++ L D D+L + L +++ + NA L ++N + + I+ N I
Sbjct: 161 KVSDHLAPDA---DELIYRFLYEENDSVCKRNAFVCLGDLNREAA--LQYIQDNISVIET 215
Query: 668 LLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKL 727
L + + + DS+ N + K Q + +T + ++ V+ A L L
Sbjct: 216 LDPLIQ--LAFIEFIKKDSIQNPALK-----QQYAQLMTEIIESSSNVVMYEAANTLTVL 268
Query: 728 ----MEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKH-EM 782
+L FV T++ S+ V+ + L IN + ++ P +L+ +
Sbjct: 269 TSNPQSILLAGNKFVELATRE----------SDNNVKIITLERINQLHKQHPGVLQDLSL 318
Query: 783 KVFFVKYNDPIYVKLEKLDIMIRLASQANIAQV 815
++ V + + VK + LD+ ++ + N+ V
Sbjct: 319 EILRVLSSQDLDVKKKALDVTLQFITTRNVEDV 351
Score = 101 (40.6 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 80/346 (23%), Positives = 150/346 (43%)
Query: 552 VKDC-EDSNPLIRALAVRTMGCIRVDKITEYLC----EPLRKCLKDE-DPYVRKTAAVCV 605
V+ C E + +R AV + I K++++L E + + L +E D ++ A VC+
Sbjct: 137 VRQCLEHRHAYVRKNAVFALWSIH--KVSDHLAPDADELIYRFLYEENDSVCKRNAFVCL 194
Query: 606 AKLY-DINAQLVEDQ-GFLDQLKDLLS---------DS--NPMVVANAVAALSEMNEAST 652
L + Q ++D ++ L L+ DS NP + ++E+ E+S
Sbjct: 195 GDLNREAALQYIQDNISVIETLDPLIQLAFIEFIKKDSIQNPALKQQYAQLMTEIIESS- 253
Query: 653 SGVALIEMNAQTINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSIC-ERITPRLAH 711
S V + E A T+ L + G F+ L+ + + D + I ERI +L
Sbjct: 254 SNVVMYEA-ANTLTVLTSNPQSILLAGNKFV--ELA--TRESDNNVKIITLERIN-QLHK 307
Query: 712 ANAAVV----LSAVKVLMKL-MEMLPGEGDF-VSTLTKKLAPPLVTLLSSEPEVQYVALR 765
+ V+ L ++VL +++ D + +T + +V LL E +Q AL
Sbjct: 308 QHPGVLQDLSLEILRVLSSQDLDVKKKALDVTLQFITTRNVEDVVKLLKKE--LQSTALS 365
Query: 766 NINLIVQKRPDILK--HEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQ-EA 822
N + R ++ H++ + FV+ V +D+++ +IA +N E
Sbjct: 366 NDDKNADYRQLLINAIHQLAIKFVE------VAANVIDLLLD-----SIADLNTTAAYEV 414
Query: 823 IVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYA 868
I +K++ K+P+ + I+ L L + + +W+IGEYA
Sbjct: 415 ITFVKEVVEKFPDLRDAILRRLILALPHVKSGKVFRGALWVIGEYA 460
Score = 97 (39.2 bits), Expect = 0.00047, Sum P(3) = 0.00047
Identities = 34/151 (22%), Positives = 68/151 (45%)
Query: 297 SEPEVQYVALRNINLIVQKRPDILKH-EMKVFFVKYNDPIYVKLEKLDIMIRLASQANIA 355
S+ V+ + L IN + ++ P +L+ +++ V + + VK + LD+ ++ + N+
Sbjct: 290 SDNNVKIITLERINQLHKQHPGVLQDLSLEILRVLSSQDLDVKKKALDVTLQFITTRNVE 349
Query: 356 QVLS----ELKEYATEVD---VDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKYAE 408
V+ EL+ A D D+ + + AI + AIK + A + LLD I
Sbjct: 350 DVVKLLKKELQSTALSNDDKNADYRQLLINAIHQLAIKFVEVAANVIDLLLDSIADLNTT 409
Query: 409 RIDNADELLESFLEGFHDENTQVQLQLLTAI 439
++ +E F D + +L+ A+
Sbjct: 410 AAYEVITFVKEVVEKFPDLRDAILRRLILAL 440
Score = 78 (32.5 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 17/66 (25%), Positives = 33/66 (50%)
Query: 123 KDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDIN 182
+D + N IR +R + ++ ++ E L +R+CL+ YVRK A + ++ ++
Sbjct: 104 RDLQHPNEYIRGNTLRYLTKLKEPELLETLVPNVRQCLEHRHAYVRKNAVFALWSIHKVS 163
Query: 183 AQLVED 188
L D
Sbjct: 164 DHLAPD 169
Score = 47 (21.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 20/78 (25%), Positives = 30/78 (38%)
Query: 1 MTDSKYF-----TTTKKGEIFELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVV 55
M+DS Y T K + E K L + ++ G + L ++
Sbjct: 1 MSDSGYTLIYEPNTATKVSVNEFKNLLEKGKDDVKVDTMKKILITILNGDPLPDLLMHII 60
Query: 56 N-CMQTDNLELKKLVYLY 72
M + N ELKKL+Y Y
Sbjct: 61 RFVMPSRNKELKKLLYHY 78
>DICTYBASE|DDB_G0279537 [details] [associations]
symbol:ap3d1 "delta adaptin" species:44689
"Dictyostelium discoideum" [GO:0030123 "AP-3 adaptor complex"
evidence=IDA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0010008 "endosome membrane"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR016024
InterPro:IPR017105 Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037092
SMART:SM00809 dictyBase:DDB_G0279537 GO:GO:0005794 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GenomeReviews:CM000152_GR GO:GO:0008565
GO:GO:0006897 GO:GO:0010008 EMBL:AAFI02000031 GO:GO:0030131
PROSITE:PS50180 GO:GO:0030123 KO:K12396 eggNOG:NOG285451
RefSeq:XP_641687.1 ProteinModelPortal:Q54WN0 STRING:Q54WN0
EnsemblProtists:DDB0234240 GeneID:8622095 KEGG:ddi:DDB_G0279537
ProtClustDB:CLSZ2430692 Uniprot:Q54WN0
Length = 1143
Score = 146 (56.5 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 65/316 (20%), Positives = 134/316 (42%)
Query: 503 VGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLI 562
+G D+S +V M + K++ YL D+ ++A + KD SN
Sbjct: 55 LGFDISWASFKIVEVMSCNKFSSKRIGYLAASQSFNEGTDVIVLATHQIRKDFLSSNQSE 114
Query: 563 RALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVED-QGF 621
LA+ + I + L + L + ++ K A + LY I + E +
Sbjct: 115 AYLALNCLSNICTTDLARELANDILTLLSTQKTHILKRA---ITVLYKIFLRYPESLRPA 171
Query: 622 LDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTEWGQV 681
+L++ L D P VV+ +V + E+ + + A + ++LT W +
Sbjct: 172 FPKLREKLDDPEPSVVSCSVNVICELARRNPKNYLPL---APVLFRILTNTTN-NYWMLI 227
Query: 682 FILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTL 741
I+ + +P + R + + + +T + +++ +V L + + + G D + L
Sbjct: 228 KIVKLFAALTPHEPRLGKKLIDPLT-NIINSSPSVSL----LYECIQTCITGMSDHIP-L 281
Query: 742 TKKLAPPLVTLLS-SEPEVQYVALRNINLIVQKRPD-ILKHEMKVFFVKYNDPIYVKLEK 799
K L TL+ ++ ++Y+ L +N I++ P + +H V +D I ++L
Sbjct: 282 MKLCISKLRTLIEHNDQNLKYLGLLALNNIMKIHPKAVSEHRDLVLNCLEDDDISIRLRA 341
Query: 800 LDIMIRLASQANIAQV 815
LD++ + S+ NI +
Sbjct: 342 LDLLPGMTSKKNIGDI 357
Score = 56 (24.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 20/92 (21%), Positives = 44/92 (47%)
Query: 800 LDIMIRLASQANIAQVNYVVQEAI-VVIK-DIFRKYPNKYETIISTLCENLDTLDEP--- 854
++I+++L+ + + + + VVI+ I R Y + + L +N + P
Sbjct: 399 INILVKLSQIQDSIHGKLIASQLLDVVIRVKIVRAYSTRQ---MIELLKNPKLMSNPTEG 455
Query: 855 ---EARASMIWIIGEYAERIDNADELLESFLE 883
E + WI+GE++ ++ + LE+FL+
Sbjct: 456 GMCEVLYAAAWIVGEFSGYVNRPIDALEAFLQ 487
>MGI|MGI:1336993 [details] [associations]
symbol:Ap4e1 "adaptor-related protein complex AP-4, epsilon
1" species:10090 "Mus musculus" [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=TAS] [GO:0006810
"transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=TAS] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 Pfam:PF01602 Pfam:PF07718
MGI:MGI:1336993 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0005198 GO:GO:0005802
eggNOG:NOG303101 GeneTree:ENSGT00390000012618 CTD:23431
HOGENOM:HOG000231886 HOVERGEN:HBG050522 KO:K12400 OMA:KYAPDNA
OrthoDB:EOG4QFWCJ GO:GO:0030126 InterPro:IPR017109
PANTHER:PTHR22780:SF6 PIRSF:PIRSF037097 EMBL:AK144636 EMBL:AL928836
EMBL:AL928590 EMBL:BC042530 IPI:IPI00667233 RefSeq:NP_780759.2
UniGene:Mm.134045 ProteinModelPortal:Q80V94 SMR:Q80V94
STRING:Q80V94 PhosphoSite:Q80V94 PaxDb:Q80V94 PRIDE:Q80V94
DNASU:108011 Ensembl:ENSMUST00000002063 GeneID:108011
KEGG:mmu:108011 InParanoid:A2ASB4 NextBio:359873 Bgee:Q80V94
CleanEx:MM_AP4E1 Genevestigator:Q80V94
GermOnline:ENSMUSG00000001998 Uniprot:Q80V94
Length = 1122
Score = 157 (60.3 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 79/385 (20%), Positives = 169/385 (43%)
Query: 493 LTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFV 552
+ RL+ M +G D S + + Q NL K++ YL + + ++ ++ VNT V
Sbjct: 80 MVRLIYCEM-LGYDASFGYIHAIKLAQQGNLLEKRVGYLAVSLFLHESHELLLLLVNTVV 138
Query: 553 KDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDIN 612
KD + +N + +A+ + I ++ + + L+ +R+ A + + K Y I
Sbjct: 139 KDLQSTNLVEVCMALTVVSQIFPREMIPAVLPLIEDKLQHSKEIIRRKAVLALYKFYLIA 198
Query: 613 AQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTAL 672
V Q + + L D + V+A ++ M + + SG + + TI K +
Sbjct: 199 PNQV--QHIHTKFRKALCDRDVGVMAASLHIYLRMIKENASGYKDLTESFVTILKQVVGG 256
Query: 673 NECTE---------WGQVFILDSLSNYSPKDDREAQSICERITPRLAHA--NAAVVLSAV 721
E W Q+ +L L D+R ++ + + + L A N V + +
Sbjct: 257 KLPVEFSYHSVPAPWLQIQLLRILGLLGKDDERTSELMYDVLDESLRRAELNHNVTYAIL 316
Query: 722 KVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDI-LKH 780
+ + + + + + K + +LS + ++Y+ L+ + ++Q+ P + L+H
Sbjct: 317 FECVHTIYSIYPKSELLEKAAKCIGK---FVLSPKINLKYLGLKALTYVIQQDPSLALQH 373
Query: 781 EMKVF-FVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYET 839
++ + + + DPI +K E L+++ R+ + N+ +VQ+ + + + +K E
Sbjct: 374 QITIIECLDHPDPI-IKRETLELLYRITNAQNVV---VIVQKMLEYL------HQSKEEH 423
Query: 840 IISTLCENLDTLDEPEARASMIWII 864
II +L + L E A + +W I
Sbjct: 424 IIISLVGRIAELAEKYAPDN-VWFI 447
Score = 42 (19.8 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 860 MIWIIGEYAERID 872
M W++GEY+ +D
Sbjct: 513 MSWVLGEYSYLLD 525
>SGD|S000002646 [details] [associations]
symbol:SEC26 "Essential beta-coat protein of the COPI
coatomer" species:4932 "Saccharomyces cerevisiae" [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA;IGI;ISS] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0030135
"coated vesicle" evidence=ISS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 InterPro:IPR016460
Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727 SGD:S000002646
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0005198 EMBL:BK006938 GO:GO:0006888
EMBL:Z49701 eggNOG:COG5096 GO:GO:0030126 HOGENOM:HOG000207417
PANTHER:PTHR10635 GeneTree:ENSGT00390000005270 OrthoDB:EOG483HCN
EMBL:U11236 PIR:S54534 RefSeq:NP_010524.3 RefSeq:NP_010529.3
ProteinModelPortal:P41810 DIP:DIP-6467N IntAct:P41810
MINT:MINT-429001 STRING:P41810 PaxDb:P41810 PeptideAtlas:P41810
EnsemblFungi:YDR238C GeneID:851824 GeneID:851830 KEGG:sce:YDR238C
KEGG:sce:YDR243C CYGD:YDR238c KO:K12858 OMA:TEFRSMW NextBio:969701
Genevestigator:P41810 GermOnline:YDR238C Uniprot:P41810
Length = 973
Score = 140 (54.3 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 73/340 (21%), Positives = 151/340 (44%)
Query: 497 VIASMTVGKDVSALFPDVVN-CMQTDNLELKKLVYLY------LMNYAKSHPDMAIMAVN 549
++ +M G + L ++ M + N ELKKL+Y Y L K +M I+ N
Sbjct: 47 ILVTMLEGNPMPELLMHIIRFVMPSKNKELKKLLYFYWEIVPKLAEDGKLRHEM-ILVCN 105
Query: 550 TFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLY 609
D + N IR +R + +R ++ E + + CL+ YVRK A + V ++
Sbjct: 106 AIQHDLQHPNEYIRGNTLRFLTKLREAELLEQMVPSVLACLEYRHAYVRKYAILAVFSIF 165
Query: 610 DINAQLVED-QGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKL 668
++ L+ D + ++ ++++++P+ NA L+E++ + + +E N I L
Sbjct: 166 KVSEHLLPDAKEIINSF--IVAETDPICKRNAFIGLAELDRENA--LHYLENNIADIENL 221
Query: 669 LTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLM 728
L + Q FI +N +P +AQ I E + L+ + V+ + + ++
Sbjct: 222 DPLLQAV--FVQ-FIRQD-ANRTPA--LKAQYI-ELLMELLSTTTSDEVIFETALALTVL 274
Query: 729 E-----MLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMK 783
++P + L K++ + L+ + +Q + N+ + + DIL+
Sbjct: 275 SANPNVLVPAVNKLID-LAVKVSDNNIKLIVLD-RIQDINANNVGALEELTLDILR---- 328
Query: 784 VFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAI 823
V + + V+ + LDI + LA+ N V ++++ +
Sbjct: 329 ---VLNAEDLDVRSKALDISMDLATSRNAEDVVQLLKKEL 365
Score = 118 (46.6 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 71/329 (21%), Positives = 138/329 (41%)
Query: 562 IRALAVRTMGCIRVDKITEYLCEPLRKCLK-----DEDPYVRKTAAVCVAKLYDINA-QL 615
+R A+ + + K++E+L ++ + + DP ++ A + +A+L NA
Sbjct: 153 VRKYAI--LAVFSIFKVSEHLLPDAKEIINSFIVAETDPICKRNAFIGLAELDRENALHY 210
Query: 616 VEDQ-GFLDQLKDLLS---------DSN--PMVVANAVAALSEMNEASTSGVALIEMNAQ 663
+E+ ++ L LL D+N P + A + L E+ +TS + E A
Sbjct: 211 LENNIADIENLDPLLQAVFVQFIRQDANRTPALKAQYIELLMELLSTTTSDEVIFE-TAL 269
Query: 664 TINKLLTALNECTEWGQVFILDSLSNYSPK-DDREAQSICERITPRLAHANAAVVLSAVK 722
+ L N V ++ L + + K D + I + R+ NA V + +
Sbjct: 270 ALTVLSANPNVL-----VPAVNKLIDLAVKVSDNNIKLI---VLDRIQDINANNVGALEE 321
Query: 723 VLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKH-E 781
+ + ++ +L E V + ++ L T ++E VQ + + + V PD K +
Sbjct: 322 LTLDILRVLNAEDLDVRSKALDISMDLATSRNAEDVVQLLK-KELQTTVNN-PDQDKAMQ 379
Query: 782 MKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVV-IKDIFRKYPNKYETI 840
+ +K + V ++ + I +N V I+ IK++ KYP I
Sbjct: 380 YRQLLIKTIRTVAVNFVEMAASVVSLLLDFIGDLNSVAASGIIAFIKEVIEKYPQLRANI 439
Query: 841 ISTLCENLDTLDEPEARASMIWIIGEYAE 869
+ + + LD + +A +WI+GEYAE
Sbjct: 440 LENMVQTLDKVRSAKAYRGALWIMGEYAE 468
Score = 73 (30.8 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 17/65 (26%), Positives = 32/65 (49%)
Query: 124 DCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINA 183
D + N IR +R + +R ++ E + + CL+ YVRK A + V ++ ++
Sbjct: 110 DLQHPNEYIRGNTLRFLTKLREAELLEQMVPSVLACLEYRHAYVRKYAILAVFSIFKVSE 169
Query: 184 QLVED 188
L+ D
Sbjct: 170 HLLPD 174
Score = 52 (23.4 bits), Expect = 3.5e-06, Sum P(3) = 3.5e-06
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 38 IASMTVGKDVSALFPDVVN-CMQTDNLELKKLVYLY 72
+ +M G + L ++ M + N ELKKL+Y Y
Sbjct: 48 LVTMLEGNPMPELLMHIIRFVMPSKNKELKKLLYFY 83
Score = 44 (20.5 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 835 NKYETIISTLCENLDTLDEP 854
NK++ + C+N++ +D P
Sbjct: 668 NKHKRALKDSCKNIEPIDTP 687
>WB|WBGene00011775 [details] [associations]
symbol:T14G10.5 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0005798 "Golgi-associated vesicle"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0032940 "secretion by cell"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR002553 InterPro:IPR009028 InterPro:IPR013040
InterPro:IPR014863 InterPro:IPR015873 InterPro:IPR016024
Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041 GO:GO:0006898
GO:GO:0040010 GO:GO:0006915 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0002119 GO:GO:0032940
GO:GO:0005198 GO:GO:0040011 GO:GO:0000003 SUPFAM:SSF55711
SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126
GeneTree:ENSGT00390000016313 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 OMA:WDEVGEE EMBL:Z68880
GeneID:177891 KEGG:cel:CELE_T14G10.5 CTD:177891
RefSeq:NP_001255464.1 ProteinModelPortal:F5GUA3 SMR:F5GUA3
EnsemblMetazoa:T14G10.5c WormBase:T14G10.5c Uniprot:F5GUA3
Length = 885
Score = 151 (58.2 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 73/378 (19%), Positives = 170/378 (44%)
Query: 488 YILLHLTRLVIASMTVGK-DVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIM 546
+IL L ++ ++G+ + + F V Q+ ++ L+++VYL + A+ D+ I+
Sbjct: 55 FILSKLIYIIQQGESIGRTEATEAFFGVTKLWQSKDVSLRRMVYLAVKELAEVSDDV-II 113
Query: 547 AVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 606
++ KD L RA A+R + I + + + +++ + D + + +A V
Sbjct: 114 VTSSLTKDMTGREDLYRAAAIRALCKITDTGMLQTIERYMKQAIVDRNSAISSSAIVSSI 173
Query: 607 KLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTIN 666
L ++++V + + +++++ +S N MV +A+A L ++ + +A+ ++ Q +
Sbjct: 174 HLMRKSSEVV--RRWANEVQEAVSSDNHMVQYHALALLYQIR--ANDRLAVNKL-VQKFS 228
Query: 667 KLLTALNECTEWGQVFILDSLSNYSPKDD--REAQSICERITPRLAHANAAVVLSAVKVL 724
K AL + + +++ + DD R S+ I L H + VV A + +
Sbjct: 229 K--NALR--SPYAVCYLIRIATRCLVDDDHCRPDSSVFTFIESCLRHKSEMVVYEAARAI 284
Query: 725 MKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKV 784
+ L + P E + + + S + V++ A+R +N + P+ + V
Sbjct: 285 VSLPQTTPSE------IQPAITALQMCCTSPKAAVRFAAVRTLNKVAMAHPNAVM-SCNV 337
Query: 785 FFVKY-NDPIY-VKLEKLDIMIRLASQANIAQ--------VNYVVQEAIVVIKDIFR--- 831
K+ DP + + +++ +++++ + VN + E +V+ D R
Sbjct: 338 DLEKFITDPNRSIATLAITTLLKTGAESSVERLMQQIAGFVNEISDEFKIVVVDAIRSLC 397
Query: 832 -KYPNKYETIISTLCENL 848
+YP K+ ++ L + L
Sbjct: 398 SRYPRKHTVMMPFLAKML 415
Score = 44 (20.5 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 13/59 (22%), Positives = 28/59 (47%)
Query: 816 NYVVQEAIV-VIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDN 873
+Y ++AIV I I + P+ ++ LCE ++ + ++ ++G A + N
Sbjct: 420 SYDYKKAIVETIIAIIEENPDAKVAGLAHLCEFIEDCEHDNLSTRVLHLLGREAPKTPN 478
>UNIPROTKB|B3KXW5 [details] [associations]
symbol:AP1G1 "AP-1 complex subunit gamma-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0044431 "Golgi apparatus part" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0030131 SUPFAM:SSF49348 HOGENOM:HOG000210271
Gene3D:2.60.40.1230 PANTHER:PTHR22780:SF5 PROSITE:PS50180
EMBL:AC009097 EMBL:AC010653 UniGene:Hs.461253 HGNC:HGNC:555
HOVERGEN:HBG067473 ChiTaRS:AP1G1 GO:GO:0044431 EMBL:AK128078
IPI:IPI00643591 SMR:B3KXW5 STRING:B3KXW5 Ensembl:ENST00000433195
UCSC:uc002fbb.3 OMA:KIWYIDQ Uniprot:B3KXW5
Length = 845
Score = 155 (59.6 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 82/402 (20%), Positives = 174/402 (43%)
Query: 428 NTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQDSDNPDL-RDRGFIYWRLLSTGNT 486
N Q L + L + P +EL++ + + TQ + + ++ I NT
Sbjct: 9 NCQT-LNTYVMLTHLRMPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNT 67
Query: 487 FYILLHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIM 546
Y ++ +L+ M +G + + + + K++ YL M D+ ++
Sbjct: 68 -YRCRNVAKLLYMHM-LGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLL 125
Query: 547 AVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 606
N D S ++ LA+ T+GC+ ++ L + K LK + Y+RK AA+C
Sbjct: 126 MTNCIKNDLNHSTQFVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAV 185
Query: 607 KLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVA----LIEMNA 662
+ +L+E FL K+LL++ N V+ +V L+EM E S +A L+
Sbjct: 186 HVIRKVPELMEM--FLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLV 243
Query: 663 QTINKLLTA-------LNECTE-WGQVFILDSLSNYSPKDDREAQSICERITPRLAHANA 714
+ + L+ + ++ ++ + QV IL L DD ++++ + + +
Sbjct: 244 RILKNLIMSGYSPEHDVSGISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTET 303
Query: 715 AV-VLSAV--KVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIV 771
+ V +A+ + ++ +M++ G + L + LL+++ ++YVAL ++ V
Sbjct: 304 SKNVGNAILYETVLTIMDIKSESG--LRVLAINILGRF--LLNNDKNIRYVALTSLLKTV 359
Query: 772 QKRPD-ILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANI 812
Q + + +H + + + +K +++ L + NI
Sbjct: 360 QTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNI 401
Score = 103 (41.3 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 34/139 (24%), Positives = 61/139 (43%)
Query: 67 KLVYLYLMNYAKSHPDMAIMAF--STFFYQKSSSSFQCMIDIRSIPLFDLCSSVGVFVKD 124
KL+Y++++ Y + + S F K M+ + L + D
Sbjct: 75 KLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMT-NCIKND 133
Query: 125 CEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 184
S ++ LA+ T+GC+ ++ L + K LK + Y+RK AA+C + +
Sbjct: 134 LNHSTQFVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPE 193
Query: 185 LVEDQGFLDQLKDLLSDSN 203
L+E FL K+LL++ N
Sbjct: 194 LMEM--FLPATKNLLNEKN 210
Score = 75 (31.5 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 32/159 (20%), Positives = 71/159 (44%)
Query: 294 LLSSEPEVQYVALRNINLIVQKRPD-ILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQA 352
LL+++ ++YVAL ++ VQ + + +H + + + +K +++ L +
Sbjct: 340 LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGN 399
Query: 353 NIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQT--KYA--E 408
NI ++ EL + + +F I A K S + T++ ++ T Y +
Sbjct: 400 NIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDD 459
Query: 409 RIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRP 447
+ N +L+ + +E H Q +L AI+ + ++P
Sbjct: 460 AVPNLIQLITNSVE-MHAYTVQ---RLYKAILGDYSQQP 494
Score = 47 (21.6 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 35/164 (21%), Positives = 67/164 (40%)
Query: 658 IEMNAQTINKLLTA-LNECTEWGQVFILD-SLSNYSPKDDREAQSICERITP-RLAHANA 714
+EM+A T+ +L A L + ++ V + + Y D CE P ++
Sbjct: 472 VEMHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYG---DLLVSGQCEEEEPIQVTEDEV 528
Query: 715 AVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKR 774
+L +V L+ M G + T KL+ ++ +V + +I++ +Q+R
Sbjct: 529 LDILESV--LISNMSTSVTRG-YALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQR 585
Query: 775 PDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQA--NIAQVN 816
E F KY+ LE++ +M ++ + I Q N
Sbjct: 586 AV----EYNALFKKYDHMRSALLERMPVMEKVTTNGPTEIVQTN 625
Score = 37 (18.1 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 14/72 (19%), Positives = 32/72 (44%)
Query: 800 LDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENL--DTLDEPEAR 857
+D ++R+ + A +YV +A+ + + + + L + + D +P +
Sbjct: 442 IDTIMRVLTTAG----SYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQ 497
Query: 858 ASMIWIIGEYAE 869
+ W IGEY +
Sbjct: 498 VAA-WCIGEYGD 508
>UNIPROTKB|Q9UPM8 [details] [associations]
symbol:AP4E1 "AP-4 complex subunit epsilon-1" species:9606
"Homo sapiens" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
Reactome:REACT_11123 InterPro:IPR002553 InterPro:IPR011710
InterPro:IPR016024 Pfam:PF01602 Pfam:PF07718 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0005198 EMBL:CH471082 eggNOG:NOG303101 Orphanet:280763
EMBL:AF155156 EMBL:AB030653 EMBL:CR749604 EMBL:AC021752
EMBL:AC022407 EMBL:AC073964 EMBL:BC126308 EMBL:BC130466
IPI:IPI00010213 RefSeq:NP_001239056.1 RefSeq:NP_031373.2
UniGene:Hs.413366 ProteinModelPortal:Q9UPM8 SMR:Q9UPM8
IntAct:Q9UPM8 STRING:Q9UPM8 PhosphoSite:Q9UPM8 DMDM:145559441
PaxDb:Q9UPM8 PRIDE:Q9UPM8 DNASU:23431 Ensembl:ENST00000261842
Ensembl:ENST00000560508 GeneID:23431 KEGG:hsa:23431 UCSC:uc001zyx.2
CTD:23431 GeneCards:GC15P051200 HGNC:HGNC:573 HPA:HPA041749
HPA:HPA041891 MIM:607244 MIM:613744 neXtProt:NX_Q9UPM8
PharmGKB:PA24865 HOGENOM:HOG000231886 HOVERGEN:HBG050522
InParanoid:Q9UPM8 KO:K12400 OMA:KYAPDNA OrthoDB:EOG4QFWCJ
GenomeRNAi:23431 NextBio:45677 Bgee:Q9UPM8 CleanEx:HS_AP4E1
Genevestigator:Q9UPM8 GermOnline:ENSG00000081014 GO:GO:0030126
InterPro:IPR017109 PANTHER:PTHR22780:SF6 PIRSF:PIRSF037097
Uniprot:Q9UPM8
Length = 1137
Score = 151 (58.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 80/385 (20%), Positives = 169/385 (43%)
Query: 493 LTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFV 552
+ RL+ M +G D S + + Q NL K++ YL + + ++ ++ VNT V
Sbjct: 81 MVRLIYCEM-LGYDASFGYIHAIKLAQQGNLLEKRVGYLAVSLFLHESHELLLLLVNTVV 139
Query: 553 KDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDIN 612
KD + +N + +A+ + I ++ + + L+ VR+ A + + K + I
Sbjct: 140 KDLQSTNLVEVCMALTVVSQIFPCEMIPAVLPLIEDKLQHSKEIVRRKAVLALYKFHLIA 199
Query: 613 AQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGV-----ALIEMNAQTIN- 666
V Q + + L D + V+A ++ M + ++SG + + + Q +
Sbjct: 200 PNQV--QHIHIKFRKALCDRDVGVMAASLHIYLRMIKENSSGYKDLTGSFVTILKQVVGG 257
Query: 667 KLLTALNECT---EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHA--NAAVVLSAV 721
KL N + W Q+ +L L D R ++ + + + L A N V + +
Sbjct: 258 KLPVEFNYHSVPAPWLQIQLLRILGLLGKDDQRTSELMYDVLDESLRRAELNHNVTYAIL 317
Query: 722 KVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDI-LKH 780
+ + + + + + K + +LS + ++Y+ L+ + ++Q+ P + L+H
Sbjct: 318 FECVHTVYSIYPKSELLEKAAKCIGK---FVLSPKINLKYLGLKALTYVIQQDPTLALQH 374
Query: 781 EMKVF-FVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYET 839
+M + + + DPI +K E L+++ R+ + NI +VQ+ + + + +K E
Sbjct: 375 QMTIIECLDHPDPI-IKRETLELLYRITNAQNIT---VIVQKMLEYL------HQSKEEY 424
Query: 840 IISTLCENLDTLDEPEARASMIWII 864
+I L + L E A + W I
Sbjct: 425 VIVNLVGKIAELAEKYAPDNA-WFI 448
Score = 42 (19.8 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 860 MIWIIGEYAERID 872
M W++GEY+ +D
Sbjct: 514 MSWVLGEYSYLLD 526
>WB|WBGene00000161 [details] [associations]
symbol:apa-2 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030131 "clathrin adaptor
complex" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0030139 "endocytic vesicle" evidence=IDA]
[GO:0045334 "clathrin-coated endocytic vesicle" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0032794 "GTPase
activating protein binding" evidence=IPI] InterPro:IPR002553
InterPro:IPR003164 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013038 InterPro:IPR015873 InterPro:IPR016024
InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296 Pfam:PF02883
PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041 GO:GO:0005886
GO:GO:0009792 GO:GO:0006898 GO:GO:0040010 GO:GO:0006886
GO:GO:0008104 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0008565 GO:GO:0040011 GO:GO:0030131 SUPFAM:SSF55711
SUPFAM:SSF49348 eggNOG:NOG303101 HSSP:P17427 HOGENOM:HOG000170596
KO:K11824 OMA:PNKQAQM Gene3D:2.60.40.1030 Gene3D:3.30.310.30
GeneTree:ENSGT00550000074757 GO:GO:0045334 EMBL:FO081025 PIR:T16911
RefSeq:NP_509572.1 ProteinModelPortal:Q22601 SMR:Q22601
IntAct:Q22601 STRING:Q22601 PaxDb:Q22601 EnsemblMetazoa:T20B5.1.1
EnsemblMetazoa:T20B5.1.2 GeneID:181163 KEGG:cel:CELE_T20B5.1
UCSC:T20B5.1.1 CTD:181163 WormBase:T20B5.1 InParanoid:Q22601
NextBio:912676 Uniprot:Q22601
Length = 925
Score = 141 (54.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 51/206 (24%), Positives = 94/206 (45%)
Query: 503 VGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLI 562
+G D+ + VN + ++ K++ YL++ + D+ + V D NP+
Sbjct: 67 LGNDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLIEQQSDLMKLIVQGIRNDLTSRNPVH 126
Query: 563 RALAVRTMGCIRVDKITEYLCEPLRKCLKDEDP--YVRKTAAVCVAKLYDINAQLVEDQG 620
LA++ + + ++ E C L K L + +V+++AA+C+ KL+ + +
Sbjct: 127 VNLALQCISNMGSREMVEAFCTDLPKLLVSGETIDFVKQSAALCILKLFRNSPDSFQPGD 186
Query: 621 FLDQLKDLLSDSNPMVVANA---VAALSEM-NEASTSGVAL-IEMNAQTINKLLTALNEC 675
+ ++ LL+DS+ VV +A + ALS+ E V L I ++ + T L +
Sbjct: 187 YASRIVHLLNDSHMGVVTSAASLIEALSKKWPEEYKGAVPLAISRLSRIVTATYTDLQDY 246
Query: 676 T------EWGQVFILDSLSNYSPKDD 695
T W V +L L NY P DD
Sbjct: 247 TYYFVPAPWLCVKLLRLLQNYPPPDD 272
>UNIPROTKB|Q22601 [details] [associations]
symbol:apa-2 "Protein APA-2" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002553 InterPro:IPR003164 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013038 InterPro:IPR015873
InterPro:IPR016024 InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296
Pfam:PF02883 PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041
GO:GO:0005886 GO:GO:0009792 GO:GO:0006898 GO:GO:0040010
GO:GO:0006886 GO:GO:0008104 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008565 GO:GO:0040011 GO:GO:0030131
SUPFAM:SSF55711 SUPFAM:SSF49348 eggNOG:NOG303101 HSSP:P17427
HOGENOM:HOG000170596 KO:K11824 OMA:PNKQAQM Gene3D:2.60.40.1030
Gene3D:3.30.310.30 GeneTree:ENSGT00550000074757 GO:GO:0045334
EMBL:FO081025 PIR:T16911 RefSeq:NP_509572.1
ProteinModelPortal:Q22601 SMR:Q22601 IntAct:Q22601 STRING:Q22601
PaxDb:Q22601 EnsemblMetazoa:T20B5.1.1 EnsemblMetazoa:T20B5.1.2
GeneID:181163 KEGG:cel:CELE_T20B5.1 UCSC:T20B5.1.1 CTD:181163
WormBase:T20B5.1 InParanoid:Q22601 NextBio:912676 Uniprot:Q22601
Length = 925
Score = 141 (54.7 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 51/206 (24%), Positives = 94/206 (45%)
Query: 503 VGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLI 562
+G D+ + VN + ++ K++ YL++ + D+ + V D NP+
Sbjct: 67 LGNDIDFGHMEAVNLLSSNKYTEKQIGYLFISVLIEQQSDLMKLIVQGIRNDLTSRNPVH 126
Query: 563 RALAVRTMGCIRVDKITEYLCEPLRKCLKDEDP--YVRKTAAVCVAKLYDINAQLVEDQG 620
LA++ + + ++ E C L K L + +V+++AA+C+ KL+ + +
Sbjct: 127 VNLALQCISNMGSREMVEAFCTDLPKLLVSGETIDFVKQSAALCILKLFRNSPDSFQPGD 186
Query: 621 FLDQLKDLLSDSNPMVVANA---VAALSEM-NEASTSGVAL-IEMNAQTINKLLTALNEC 675
+ ++ LL+DS+ VV +A + ALS+ E V L I ++ + T L +
Sbjct: 187 YASRIVHLLNDSHMGVVTSAASLIEALSKKWPEEYKGAVPLAISRLSRIVTATYTDLQDY 246
Query: 676 T------EWGQVFILDSLSNYSPKDD 695
T W V +L L NY P DD
Sbjct: 247 TYYFVPAPWLCVKLLRLLQNYPPPDD 272
>TAIR|locus:2139479 [details] [associations]
symbol:AT4G34450 species:3702 "Arabidopsis thaliana"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005798 "Golgi-associated
vesicle" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0030276 "clathrin binding"
evidence=ISS] [GO:0016020 "membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006487 "protein N-linked
glycosylation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
GO:GO:0005829 GO:GO:0005886 GO:GO:0009506 GO:GO:0009507
GO:GO:0006886 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0016192 GO:GO:0005198 EMBL:AL161585
SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126
EMBL:AL023094 eggNOG:COG5240 HOGENOM:HOG000184434
Gene3D:2.60.40.1480 InterPro:IPR017106 PANTHER:PTHR10261
PIRSF:PIRSF037093 EMBL:AK221839 EMBL:AK226533 IPI:IPI00537691
PIR:T05265 RefSeq:NP_195171.2 UniGene:At.25572
ProteinModelPortal:Q0WW26 SMR:Q0WW26 IntAct:Q0WW26 STRING:Q0WW26
PaxDb:Q0WW26 PRIDE:Q0WW26 ProMEX:Q0WW26 EnsemblPlants:AT4G34450.1
GeneID:829596 KEGG:ath:AT4G34450 TAIR:At4g34450 InParanoid:Q0WW26
OMA:DESIFAN PhylomeDB:Q0WW26 ProtClustDB:CLSN2681006
Genevestigator:Q0WW26 Uniprot:Q0WW26
Length = 886
Score = 151 (58.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 69/357 (19%), Positives = 160/357 (44%)
Query: 506 DVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRAL 565
+ + +F V Q+ + L+++VYL + + S D I+ ++ +KD + RA
Sbjct: 67 EATEVFFSVTKLFQSKDTGLRRMVYLIIKELSPSS-DEVIIVTSSLMKDMNSKIDMYRAN 125
Query: 566 AVRTMGCIRVD-KITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQ 624
A+R + C +D + + L++ + D++P V A V L N ++V+ + ++
Sbjct: 126 AIRVL-CRIIDGTLLTQIERYLKQAIVDKNPVVSSAALVSGLHLLKTNPEIVKR--WSNE 182
Query: 625 LKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT--EWGQVF 682
+++ + + +V +A+A L ++ + V+ + + + T + + L +C +
Sbjct: 183 VQEGIQSRSALVQFHALALLHQIRQNDRLAVSKL-VGSLTRGSVRSPLAQCLLIRYTSQV 241
Query: 683 ILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLT 742
I D ++N+ +R E L H V+L A + + +L +G LT
Sbjct: 242 IRD-MANHGQSGERPFYEFLESC---LRHKAEMVILEAARAITEL------DGVTSRELT 291
Query: 743 KKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKH---EMKVFFVKYNDPIYVKLEK 799
+ + L S P +++ A+R +N + P + + +M+ N I
Sbjct: 292 PAITVLQLFLSSPRPVLRFAAVRTLNKVAMTHPMAVTNCNIDMESLISDQNRSIATLA-- 349
Query: 800 LDIMIRLASQANIAQV-----NY---VVQEAIVVIKDIFR----KYPNKYETIISTL 844
+ +++ +++++ ++ N+ + E +V+ D R K+P KY ++++ L
Sbjct: 350 ITTLLKTGNESSVERLMKQITNFMSDIADEFKIVVVDAIRSLCVKFPLKYRSLMTFL 406
Score = 39 (18.8 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 9/39 (23%), Positives = 21/39 (53%)
Query: 429 TQVQL-QLLTAIVKLFLKRPTDTQELVQQVLSLATQDSD 466
T+V+ ++ ++ KLF + T + +V ++ + SD
Sbjct: 64 TKVEATEVFFSVTKLFQSKDTGLRRMVYLIIKELSPSSD 102
>SGD|S000006116 [details] [associations]
symbol:APL5 "Delta adaptin-like subunit of the clathrin
associated protein complex" species:4932 "Saccharomyces cerevisiae"
[GO:0006623 "protein targeting to vacuole" evidence=IMP]
[GO:0006896 "Golgi to vacuole transport" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0030665 "clathrin-coated vesicle membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030123 "AP-3 adaptor complex"
evidence=IMP] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017105 Pfam:PF01602 PIRSF:PIRSF037092 SGD:S000006116
GO:GO:0005794 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0008565 EMBL:BK006949 GO:GO:0030665
GO:GO:0006896 GO:GO:0030123 GO:GO:0006623
GeneTree:ENSGT00550000075067 HOGENOM:HOG000000981 eggNOG:NOG285451
OrthoDB:EOG4QC4DP EMBL:Z73551 EMBL:U36858 PIR:S65214
RefSeq:NP_015129.1 ProteinModelPortal:Q08951 SMR:Q08951
DIP:DIP-3977N IntAct:Q08951 MINT:MINT-565984 STRING:Q08951
PaxDb:Q08951 PeptideAtlas:Q08951 EnsemblFungi:YPL195W GeneID:855906
KEGG:sce:YPL195W CYGD:YPL195w OMA:ASQSFYK NextBio:980604
Genevestigator:Q08951 GermOnline:YPL195W Uniprot:Q08951
Length = 932
Score = 129 (50.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 69/322 (21%), Positives = 139/322 (43%)
Query: 447 PTDTQELVQQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKD 506
P + +QVLS ++ ++PDL S N +L LT L + G D
Sbjct: 41 PEKLDQFFKQVLSECREEVNSPDLN----------SKTNA---VLKLTYLEM----YGFD 83
Query: 507 VSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDC--EDSNPLIRA 564
++ ++ M ++ L+ K++ YL D+ ++A N KD + +N +++
Sbjct: 84 MAWCNFHILEVMSSNKLQQKRVGYLAASQSFYKDSDILMLATNLLKKDLKYDGNNDVVKV 143
Query: 565 -LAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLD 623
+A+ + I + + + L L PY+RK A + K++ + + D D
Sbjct: 144 GIALSGLSTIITPSLARDIADDLFTMLNSTRPYIRKKAITALFKVFLQYPEALRDN--FD 201
Query: 624 QLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTEWGQVFI 683
+ L D + VV+ AV+ + E+++ + I+++ L+T N W + +
Sbjct: 202 KFVSKLDDDDISVVSAAVSVICELSKKNPQ--PFIQLSPLLYEILVTIDNN---WIIIRL 256
Query: 684 LDSLSNYSPKDDREAQSICERITPRLAHANA-AVVLSAVKVLMKLMEMLPGEGDFVSTLT 742
L +N S + + + +I + A +V+ +V ++K ML E DF + +
Sbjct: 257 LKLFTNLSQVEPKLRAKLLPKILELMESTVATSVIYESVNCIVK-GNMLE-EDDFETAMA 314
Query: 743 KKLAPPLVTLLSSE-PEVQYVA 763
L T S+ P ++Y++
Sbjct: 315 --CLERLHTFCDSQDPNLRYIS 334
Score = 62 (26.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 13/61 (21%), Positives = 33/61 (54%)
Query: 827 KDIFRKYPNKYETIISTLCENL--DTLDE--PEARASMIWIIGEYAERIDNADELLESFL 882
+++ K P+ E I+ + + + D +++ P IW +GE++ ++N ++L++
Sbjct: 478 RNLMIKVPSMREVTIANIIKLISNDNINKQLPTVLRECIWCLGEFSTLVENGNDLIKIMT 537
Query: 883 E 883
E
Sbjct: 538 E 538
>UNIPROTKB|E2RJS0 [details] [associations]
symbol:AP4E1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 Pfam:PF01602 Pfam:PF07718
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 GeneTree:ENSGT00390000012618
OMA:KYAPDNA GO:GO:0030126 InterPro:IPR017109 PANTHER:PTHR22780:SF6
PIRSF:PIRSF037097 EMBL:AAEX03016123 Ensembl:ENSCAFT00000024322
Uniprot:E2RJS0
Length = 1125
Score = 150 (57.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 80/385 (20%), Positives = 169/385 (43%)
Query: 493 LTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFV 552
+ RL+ M +G D S + + Q NL K++ YL + + ++ ++ VNT V
Sbjct: 68 MVRLIYCEM-LGYDASFGYIHAIKLAQQGNLLEKRVGYLAVSLFLHESHELLLLLVNTVV 126
Query: 553 KDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDIN 612
KD + +N + +A+ + I ++ + + L+ +R+ A + + K + I
Sbjct: 127 KDLQSTNLVEVCMALTIVSQIFPREMIPAVLPLIEDKLQHSKEIIRRKAVLALYKFHLIA 186
Query: 613 AQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGV-----ALIEMNAQTIN- 666
V Q + + L D + V+A ++ M + ++SG + + + Q +
Sbjct: 187 PNQV--QHIHIKFRKALCDRDVGVMAASLHIYFRMIKENSSGYKDLTGSFVTILKQVVGG 244
Query: 667 KLLTALNECT---EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHA--NAAVVLSAV 721
KL N + W Q+ +L L D R ++ + + + L A N V + +
Sbjct: 245 KLPVDFNYHSVPAPWLQIQLLRILGLLGKDDQRTSELMYDVLDESLRRAELNHNVTYAIL 304
Query: 722 KVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDI-LKH 780
+ + + + + + K + +LS + ++Y+ L+ + ++Q+ P + L+H
Sbjct: 305 FECVHTVYSIYPKSELLEKAAKCIGK---FVLSPKINLKYLGLKALTYVIQQDPTLALQH 361
Query: 781 EMKVF-FVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYET 839
+M + + + DPI +K E L+++ R+ + NI +VQ+ + + + +K E
Sbjct: 362 QMTIIECLDHPDPI-IKRETLELLYRITNAQNIT---VIVQKMLEYL------HQSKEEY 411
Query: 840 IISTLCENLDTLDEPEARASMIWII 864
II L + L E A + W I
Sbjct: 412 IIVNLVGKIAELAEKYAPDNA-WFI 435
Score = 42 (19.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 860 MIWIIGEYAERID 872
M W++GEY+ +D
Sbjct: 501 MSWVLGEYSYLLD 513
>MGI|MGI:101919 [details] [associations]
symbol:Ap1g1 "adaptor protein complex AP-1, gamma 1 subunit"
species:10090 "Mus musculus" [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005518 "collagen binding" evidence=ISO]
[GO:0005794 "Golgi apparatus" evidence=ISO] [GO:0005802
"trans-Golgi network" evidence=IDA;TAS] [GO:0005829 "cytosol"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=TAS] [GO:0006897
"endocytosis" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=ISO] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0015630 "microtubule cytoskeleton" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0019894 "kinesin binding" evidence=ISO]
[GO:0030117 "membrane coat" evidence=IEA] [GO:0030131 "clathrin
adaptor complex" evidence=IEA] [GO:0030136 "clathrin-coated
vesicle" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0055037 "recycling endosome" evidence=ISO]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR016024
InterPro:IPR017107 Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094
SMART:SM00809 InterPro:IPR013041 InterPro:IPR008153 MGI:MGI:101919
GO:GO:0048471 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 GO:GO:0006897
GO:GO:0030136 GO:GO:0005802 GO:GO:0030131 GO:GO:0030665
SUPFAM:SSF49348 PDB:1W63 PDBsum:1W63 eggNOG:NOG303101
HOGENOM:HOG000210271 Gene3D:2.60.40.1230 PANTHER:PTHR22780:SF5
PROSITE:PS50180 HOVERGEN:HBG067473 OrthoDB:EOG4ZGPBP EMBL:X54424
IPI:IPI00621460 PIR:A36680 UniGene:Mm.37210 PDB:1GYU PDB:1GYV
PDB:1GYW PDB:2A7B PDB:3ZY7 PDBsum:1GYU PDBsum:1GYV PDBsum:1GYW
PDBsum:2A7B PDBsum:3ZY7 ProteinModelPortal:P22892 SMR:P22892
IntAct:P22892 MINT:MINT-200421 STRING:P22892 PhosphoSite:P22892
PaxDb:P22892 PRIDE:P22892 Ensembl:ENSMUST00000034171
UCSC:uc012gkl.1 GeneTree:ENSGT00390000012618
EvolutionaryTrace:P22892 Bgee:P22892 CleanEx:MM_AP1G1
Genevestigator:P22892 GO:GO:0044431 Uniprot:P22892
Length = 822
Score = 151 (58.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 78/383 (20%), Positives = 168/383 (43%)
Query: 447 PTDTQELVQQVLSLATQDSDNPDL-RDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGK 505
P +EL++ + + TQ + + ++ I NT Y ++ +L+ M +G
Sbjct: 4 PIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNT-YRCRNVAKLLYMHM-LGY 61
Query: 506 DVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRAL 565
+ + + + K++ YL M D+ ++ N D S ++ L
Sbjct: 62 PAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGL 121
Query: 566 AVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQL 625
A+ T+GC+ ++ L + K LK + Y+RK AA+C + +L+E FL
Sbjct: 122 ALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPAT 179
Query: 626 KDLLSDSNPMVVANAVAALSEMNEASTSGVA----LIEMNAQTINKLLTA-------LNE 674
K+LL++ N V+ +V L+EM E S +A L+ + + L+ + ++
Sbjct: 180 KNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSG 239
Query: 675 CTE-WGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAV-VLSAV--KVLMKLMEM 730
++ + QV IL L DD ++++ + + + + V +A+ + ++ +M++
Sbjct: 240 ISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDI 299
Query: 731 LPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPD-ILKHEMKVFFVKY 789
G + L + LL+++ ++YVAL ++ VQ + + +H +
Sbjct: 300 KSESG--LRVLAINILGRF--LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLK 355
Query: 790 NDPIYVKLEKLDIMIRLASQANI 812
+ + +K +++ L + NI
Sbjct: 356 DLDVSIKRRAMELSFALVNGNNI 378
Score = 103 (41.3 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 34/139 (24%), Positives = 61/139 (43%)
Query: 67 KLVYLYLMNYAKSHPDMAIMAF--STFFYQKSSSSFQCMIDIRSIPLFDLCSSVGVFVKD 124
KL+Y++++ Y + + S F K M+ + L + D
Sbjct: 52 KLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMT-NCIKND 110
Query: 125 CEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 184
S ++ LA+ T+GC+ ++ L + K LK + Y+RK AA+C + +
Sbjct: 111 LNHSTQFVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPE 170
Query: 185 LVEDQGFLDQLKDLLSDSN 203
L+E FL K+LL++ N
Sbjct: 171 LMEM--FLPATKNLLNEKN 187
Score = 75 (31.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 32/159 (20%), Positives = 71/159 (44%)
Query: 294 LLSSEPEVQYVALRNINLIVQKRPD-ILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQA 352
LL+++ ++YVAL ++ VQ + + +H + + + +K +++ L +
Sbjct: 317 LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGN 376
Query: 353 NIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQT--KYA--E 408
NI ++ EL + + +F I A K S + T++ ++ T Y +
Sbjct: 377 NIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDD 436
Query: 409 RIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRP 447
+ N +L+ + +E H Q +L AI+ + ++P
Sbjct: 437 AVPNLIQLITNSVE-MHAYTVQ---RLYKAILGDYSQQP 471
Score = 48 (22.0 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 35/164 (21%), Positives = 68/164 (41%)
Query: 658 IEMNAQTINKLLTA-LNECTEWGQVFILD-SLSNYSPKDDREAQSICERITP-RLAHANA 714
+EM+A T+ +L A L + ++ V + + Y D CE P ++
Sbjct: 449 VEMHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYG---DLLVSGQCEEEEPIQVTEDEV 505
Query: 715 AVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKR 774
+L +V L+ M G + T KL+ ++ +V + +I++ +Q+R
Sbjct: 506 LDILESV--LISNMSTSVTRG-YALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQR 562
Query: 775 PDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQ--ANIAQVN 816
E F KY+ LE++ +M ++ + + I Q N
Sbjct: 563 AV----EYNALFKKYDHMRSALLERMPVMEKVTTNGPSEIVQTN 602
Score = 37 (18.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 14/72 (19%), Positives = 32/72 (44%)
Query: 800 LDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENL--DTLDEPEAR 857
+D ++R+ + A +YV +A+ + + + + L + + D +P +
Sbjct: 419 IDTIMRVLTTAG----SYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQ 474
Query: 858 ASMIWIIGEYAE 869
+ W IGEY +
Sbjct: 475 VAA-WCIGEYGD 485
>UNIPROTKB|O43747 [details] [associations]
symbol:AP1G1 "AP-1 complex subunit gamma-1" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0055037 "recycling endosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005215
"transporter activity" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0030119 "AP-type membrane coat adaptor complex"
evidence=TAS] [GO:0019894 "kinesin binding" evidence=IPI]
[GO:0030136 "clathrin-coated vesicle" evidence=IDA] [GO:0000139
"Golgi membrane" evidence=TAS] [GO:0005765 "lysosomal membrane"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006892
"post-Golgi vesicle-mediated transport" evidence=TAS] [GO:0016032
"viral reproduction" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0019886 "antigen processing and
presentation of exogenous peptide antigen via MHC class II"
evidence=TAS] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=TAS] [GO:0032588 "trans-Golgi network membrane"
evidence=TAS] [GO:0050690 "regulation of defense response to virus
by virus" evidence=TAS] [GO:0030665 "clathrin-coated vesicle
membrane" evidence=ISS] Reactome:REACT_11123 InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0005829 GO:GO:0048471
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006886
GO:GO:0000139 GO:GO:0050690 GO:GO:0016032 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0005765 GO:GO:0032588
GO:GO:0019886 GO:GO:0008565 GO:GO:0006897 GO:GO:0005215
GO:GO:0055037 GO:GO:0030131 GO:GO:0030665 SUPFAM:SSF49348
GO:GO:0016044 GO:GO:0006892 eggNOG:NOG303101 HOGENOM:HOG000210271
KO:K12391 Gene3D:2.60.40.1230 PANTHER:PTHR22780:SF5 PROSITE:PS50180
EMBL:Y12226 EMBL:AJ224112 EMBL:AJ224113 EMBL:AJ224114 EMBL:AB015317
EMBL:AC009097 EMBL:AC010653 EMBL:AL050025 EMBL:AL110198
IPI:IPI00293396 IPI:IPI00939879 RefSeq:NP_001025178.1
RefSeq:NP_001119.3 UniGene:Hs.461253 PDB:1IU1 PDBsum:1IU1
ProteinModelPortal:O43747 SMR:O43747 IntAct:O43747
MINT:MINT-3369703 STRING:O43747 PhosphoSite:O43747 PaxDb:O43747
PRIDE:O43747 DNASU:164 Ensembl:ENST00000299980
Ensembl:ENST00000393512 Ensembl:ENST00000569748 GeneID:164
KEGG:hsa:164 UCSC:uc010cgg.3 UCSC:uc021tky.1 CTD:164
GeneCards:GC16M071762 HGNC:HGNC:555 HPA:CAB009049 MIM:603533
neXtProt:NX_O43747 PharmGKB:PA24845 HOVERGEN:HBG067473
OrthoDB:EOG4ZGPBP ChiTaRS:AP1G1 EvolutionaryTrace:O43747
GenomeRNAi:164 NextBio:659 PMAP-CutDB:O43747 ArrayExpress:O43747
Bgee:O43747 CleanEx:HS_AP1G1 Genevestigator:O43747
GermOnline:ENSG00000166747 GO:GO:0030119 Uniprot:O43747
Length = 822
Score = 151 (58.2 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 78/383 (20%), Positives = 168/383 (43%)
Query: 447 PTDTQELVQQVLSLATQDSDNPDL-RDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGK 505
P +EL++ + + TQ + + ++ I NT Y ++ +L+ M +G
Sbjct: 4 PIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNT-YRCRNVAKLLYMHM-LGY 61
Query: 506 DVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRAL 565
+ + + + K++ YL M D+ ++ N D S ++ L
Sbjct: 62 PAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGL 121
Query: 566 AVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQL 625
A+ T+GC+ ++ L + K LK + Y+RK AA+C + +L+E FL
Sbjct: 122 ALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPAT 179
Query: 626 KDLLSDSNPMVVANAVAALSEMNEASTSGVA----LIEMNAQTINKLLTA-------LNE 674
K+LL++ N V+ +V L+EM E S +A L+ + + L+ + ++
Sbjct: 180 KNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSG 239
Query: 675 CTE-WGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAV-VLSAV--KVLMKLMEM 730
++ + QV IL L DD ++++ + + + + V +A+ + ++ +M++
Sbjct: 240 ISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDI 299
Query: 731 LPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPD-ILKHEMKVFFVKY 789
G + L + LL+++ ++YVAL ++ VQ + + +H +
Sbjct: 300 KSESG--LRVLAINILGRF--LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLK 355
Query: 790 NDPIYVKLEKLDIMIRLASQANI 812
+ + +K +++ L + NI
Sbjct: 356 DLDVSIKRRAMELSFALVNGNNI 378
Score = 103 (41.3 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 34/139 (24%), Positives = 61/139 (43%)
Query: 67 KLVYLYLMNYAKSHPDMAIMAF--STFFYQKSSSSFQCMIDIRSIPLFDLCSSVGVFVKD 124
KL+Y++++ Y + + S F K M+ + L + D
Sbjct: 52 KLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMT-NCIKND 110
Query: 125 CEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 184
S ++ LA+ T+GC+ ++ L + K LK + Y+RK AA+C + +
Sbjct: 111 LNHSTQFVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPE 170
Query: 185 LVEDQGFLDQLKDLLSDSN 203
L+E FL K+LL++ N
Sbjct: 171 LMEM--FLPATKNLLNEKN 187
Score = 75 (31.5 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 32/159 (20%), Positives = 71/159 (44%)
Query: 294 LLSSEPEVQYVALRNINLIVQKRPD-ILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQA 352
LL+++ ++YVAL ++ VQ + + +H + + + +K +++ L +
Sbjct: 317 LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGN 376
Query: 353 NIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQT--KYA--E 408
NI ++ EL + + +F I A K S + T++ ++ T Y +
Sbjct: 377 NIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDD 436
Query: 409 RIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRP 447
+ N +L+ + +E H Q +L AI+ + ++P
Sbjct: 437 AVPNLIQLITNSVE-MHAYTVQ---RLYKAILGDYSQQP 471
Score = 47 (21.6 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 35/164 (21%), Positives = 67/164 (40%)
Query: 658 IEMNAQTINKLLTA-LNECTEWGQVFILD-SLSNYSPKDDREAQSICERITP-RLAHANA 714
+EM+A T+ +L A L + ++ V + + Y D CE P ++
Sbjct: 449 VEMHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYG---DLLVSGQCEEEEPIQVTEDEV 505
Query: 715 AVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKR 774
+L +V L+ M G + T KL+ ++ +V + +I++ +Q+R
Sbjct: 506 LDILESV--LISNMSTSVTRG-YALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQR 562
Query: 775 PDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQA--NIAQVN 816
E F KY+ LE++ +M ++ + I Q N
Sbjct: 563 AV----EYNALFKKYDHMRSALLERMPVMEKVTTNGPTEIVQTN 602
Score = 37 (18.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 14/72 (19%), Positives = 32/72 (44%)
Query: 800 LDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENL--DTLDEPEAR 857
+D ++R+ + A +YV +A+ + + + + L + + D +P +
Sbjct: 419 IDTIMRVLTTAG----SYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQ 474
Query: 858 ASMIWIIGEYAE 869
+ W IGEY +
Sbjct: 475 VAA-WCIGEYGD 485
>UNIPROTKB|H3BR36 [details] [associations]
symbol:AP1G1 "AP-1 complex subunit gamma-1" species:9606
"Homo sapiens" [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017107 Pfam:PF01602 GO:GO:0005794 GO:GO:0048471
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0030117 GO:GO:0016192 GO:GO:0008565 GO:GO:0005802
PANTHER:PTHR22780:SF5 EMBL:AC009097 EMBL:AC010653 HGNC:HGNC:555
ChiTaRS:AP1G1 Ensembl:ENST00000563259 Bgee:H3BR36 Uniprot:H3BR36
Length = 187
Score = 124 (48.7 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 43/188 (22%), Positives = 83/188 (44%)
Query: 447 PTDTQELVQQVLSLATQDSDNPDL-RDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGK 505
P +EL++ + + TQ + + ++ I NT Y ++ +L+ M +G
Sbjct: 4 PIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNT-YRCRNVAKLLYMHM-LGY 61
Query: 506 DVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRAL 565
+ + + + K++ YL M D+ ++ N D S ++ L
Sbjct: 62 PAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGL 121
Query: 566 AVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQL 625
A+ T+GC+ ++ L + K LK + Y+RK AA+C + +L+E FL
Sbjct: 122 ALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPAT 179
Query: 626 KDLLSDSN 633
K+LL++ N
Sbjct: 180 KNLLNEKN 187
>ASPGD|ASPL0000052724 [details] [associations]
symbol:AN1177 species:162425 "Emericella nidulans"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR002553 InterPro:IPR011710
InterPro:IPR016024 InterPro:IPR016460 Pfam:PF01602 Pfam:PF07718
PIRSF:PIRSF005727 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 EMBL:AACD01000016 EMBL:BN001308
GO:GO:0005198 eggNOG:COG5096 GO:GO:0030126 HOGENOM:HOG000207417
PANTHER:PTHR10635 OMA:DFEWENK OrthoDB:EOG483HCN RefSeq:XP_658781.1
ProteinModelPortal:Q5BE53 STRING:Q5BE53
EnsemblFungi:CADANIAT00001449 GeneID:2876954 KEGG:ani:AN1177.2
Uniprot:Q5BE53
Length = 950
Score = 132 (51.5 bits), Expect = 0.00012, P = 0.00012
Identities = 79/393 (20%), Positives = 165/393 (41%)
Query: 491 LHLTRLVIASMTVGKDVSALFPDVVN-CMQTDNLELKKLVYLYLM------NYAKSHPDM 543
L R +I M G + L ++ M + + LKKL+Y Y + K +M
Sbjct: 39 LDTMRRIITIMLNGDPMPQLLMHIIRFVMPSKSKPLKKLLYFYYEICPKHDSNGKLKQEM 98
Query: 544 AIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAV 603
I+ N D + N +R +R + +R ++ E L R CL YVRK+A
Sbjct: 99 -ILVCNGIRNDLQHPNEYVRGNTLRFLCKLREPELIEPLLSSARSCLDHRHAYVRKSAVW 157
Query: 604 CVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQ 663
++ ++ + L+ D L Q L ++S+ NA AAL ++ +E A
Sbjct: 158 AISSIFQHSESLIPDAPELIQTF-LETESDGTCKRNAFAALMSISHQKA-----LEYLAS 211
Query: 664 TINKLLTALNECTEWGQV-FIL-DSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAV 721
T + + +E + ++ FI D++ N K A+ + R+ L A+ + V+
Sbjct: 212 TFDSIPNT-DELLQLAELEFIRKDAVQNSQNK----ARYL--RLIFDLLDASTSTVVYEA 264
Query: 722 KVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKH- 780
+ + P V KL +++ ++ V+ + L ++ + + +L
Sbjct: 265 ATSLTALTSNPVA---VKAAAGKLIE--LSIKEADNNVKLIVLDRVDQLRIRNEGVLDDL 319
Query: 781 EMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETI 840
M++ V + I V+ + L I + + S N+ ++ ++++ + D + ++Y +
Sbjct: 320 TMEILRVLSSPDIDVRRKALGIALEMVSSKNVEEIVMLLKKELSKTVDEQYEKNSEYRQL 379
Query: 841 ISTLCENLDTLDEPEARASMIWIIGEYAERIDN 873
+ N + E AS++ ++ ++ +N
Sbjct: 380 LIQSIHNC-AIKFSEIAASVVDLLMDFIADFNN 411
Score = 84 (34.6 bits), Expect = 2.2e-05, Sum P(4) = 2.2e-05
Identities = 31/128 (24%), Positives = 60/128 (46%)
Query: 285 KKLAPPLVTLLSSEPE--VQYVALRNINLIVQKRPDILKH-EMKVFFVKYNDPIYVKLEK 341
K A L+ L E + V+ + L ++ + + +L M++ V + I V+ +
Sbjct: 279 KAAAGKLIELSIKEADNNVKLIVLDRVDQLRIRNEGVLDDLTMEILRVLSSPDIDVRRKA 338
Query: 342 LDIMIRLASQANIAQVLSELK-EYATEVDVDFVRKA------VRAIGRCAIKVEQSAERC 394
L I + + S N+ +++ LK E + VD + + + +++I CAIK + A
Sbjct: 339 LGIALEMVSSKNVEEIVMLLKKELSKTVDEQYEKNSEYRQLLIQSIHNCAIKFSEIAASV 398
Query: 395 VSTLLDLI 402
V L+D I
Sbjct: 399 VDLLMDFI 406
Score = 78 (32.5 bits), Expect = 2.2e-05, Sum P(4) = 2.2e-05
Identities = 17/65 (26%), Positives = 31/65 (47%)
Query: 124 DCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINA 183
D + N +R +R + +R ++ E L R CL YVRK+A ++ ++ +
Sbjct: 108 DLQHPNEYVRGNTLRFLCKLREPELIEPLLSSARSCLDHRHAYVRKSAVWAISSIFQHSE 167
Query: 184 QLVED 188
L+ D
Sbjct: 168 SLIPD 172
Score = 72 (30.4 bits), Expect = 2.2e-05, Sum P(4) = 2.2e-05
Identities = 11/48 (22%), Positives = 26/48 (54%)
Query: 821 EAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYA 868
+ I +K++ K+P +I++ L L + + ++W++GEY+
Sbjct: 416 DVISFVKEVVEKFPKLRPSIVNRLVSTLSEVRAGKVYRGVLWVVGEYS 463
Score = 44 (20.5 bits), Expect = 2.2e-05, Sum P(4) = 2.2e-05
Identities = 15/57 (26%), Positives = 22/57 (38%)
Query: 17 ELKGELNSDXXXXXXXXXXXXIASMTVGKDVSALFPDVVN-CMQTDNLELKKLVYLY 72
ELK +L I M G + L ++ M + + LKKL+Y Y
Sbjct: 25 ELKLQLEKGTDETKLDTMRRIITIMLNGDPMPQLLMHIIRFVMPSKSKPLKKLLYFY 81
>ZFIN|ZDB-GENE-030131-3187 [details] [associations]
symbol:ap1g1 "adaptor-related protein complex 1,
gamma 1 subunit" species:7955 "Danio rerio" [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0030131 "clathrin adaptor
complex" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR016024
InterPro:IPR017107 Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094
SMART:SM00809 InterPro:IPR013041 InterPro:IPR008153
ZFIN:ZDB-GENE-030131-3187 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0030131 SUPFAM:SSF49348 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 GeneTree:ENSGT00390000012618
GO:GO:0044431 EMBL:CU914549 IPI:IPI01024413
Ensembl:ENSDART00000150062 ArrayExpress:F8W5I5 Uniprot:F8W5I5
Length = 821
Score = 149 (57.5 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 78/383 (20%), Positives = 168/383 (43%)
Query: 447 PTDTQELVQQVLSLATQDSDNPDL-RDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGK 505
P +EL++ + + TQ + + ++ I NT Y ++ +L+ M +G
Sbjct: 6 PIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNT-YRCRNVAKLLYMHM-LGY 63
Query: 506 DVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRAL 565
+ + + + K++ YL M D+ ++ N D S ++ L
Sbjct: 64 PAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGL 123
Query: 566 AVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQL 625
A+ T+GC+ ++ L + K LK + Y+RK AA+C + +L+E FL
Sbjct: 124 ALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPAT 181
Query: 626 KDLLSDSNPMVVANAVAALSEMNEASTSGVA----LIEMNAQTINKLLTA-------LNE 674
K+LLS+ N V+ +V L+EM E S ++ L+ + + L+ + ++
Sbjct: 182 KNLLSEKNHGVLHTSVVLLTEMCERSPDMLSHFRKLVPQLVRILKNLIMSGYSPEHDVSG 241
Query: 675 CTE-WGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAV-VLSAV--KVLMKLMEM 730
++ + QV IL L DD ++++ + + + + V +A+ + ++ +M++
Sbjct: 242 ISDPFLQVRILRLLRILGKGDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDI 301
Query: 731 LPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPD-ILKHEMKVFFVKY 789
G + L + LL+++ ++YVAL ++ VQ + + +H +
Sbjct: 302 KSESG--LRVLAINILGRF--LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLK 357
Query: 790 NDPIYVKLEKLDIMIRLASQANI 812
+ + +K +++ L + NI
Sbjct: 358 DLDVSIKRRAMELSFALVNGNNI 380
Score = 105 (42.0 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 35/139 (25%), Positives = 61/139 (43%)
Query: 67 KLVYLYLMNYAKSHPDMAIMAF--STFFYQKSSSSFQCMIDIRSIPLFDLCSSVGVFVKD 124
KL+Y++++ Y + + S F K M+ + L + D
Sbjct: 54 KLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMT-NCIKND 112
Query: 125 CEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 184
S ++ LA+ T+GC+ ++ L + K LK + Y+RK AA+C + +
Sbjct: 113 LNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPE 172
Query: 185 LVEDQGFLDQLKDLLSDSN 203
L+E FL K+LLS+ N
Sbjct: 173 LMEM--FLPATKNLLSEKN 189
Score = 77 (32.2 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 27/128 (21%), Positives = 57/128 (44%)
Query: 294 LLSSEPEVQYVALRNINLIVQKRPD-ILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQA 352
LL+++ ++YVAL ++ VQ + + +H + + + +K +++ L +
Sbjct: 319 LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGN 378
Query: 353 NIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQT--KYAERI 410
NI ++ EL + D +F I A K S + T++ ++ T Y R
Sbjct: 379 NIRGMMKELLYFLDSCDPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYV-RD 437
Query: 411 DNADELLE 418
D+ L++
Sbjct: 438 DSVPNLIQ 445
Score = 51 (23.0 bits), Expect = 2.2e-05, Sum P(3) = 2.2e-05
Identities = 48/199 (24%), Positives = 80/199 (40%)
Query: 658 IEMNAQTINKLLTAL-NECTEWGQVFILD-SLSNYSPKDDREAQSICERITPRLAHANAA 715
+EM+A T+ +L AL ++ ++ V + + Y D CE P +
Sbjct: 451 VEMHAYTVQRLYKALLDDISQQPLVQVASWCIGEYG---DLLVSGQCEEEEP--IQVSED 505
Query: 716 VVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQ-YVALRNINLIVQKR 774
VL ++ L+ P + T KL+ T SS ++ V++ ++ V+ +
Sbjct: 506 EVLDVLEGLLVSNLSAPVTRGYSLTAIMKLS----TRFSSVNRIKKVVSIYGSSIDVELQ 561
Query: 775 PDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQ--ANIAQVNYVVQEAIVVIKDIFRK 832
+ E F KY+ LE++ IM + A+ A I Q N E I D K
Sbjct: 562 QRAV--EYNALFKKYDHMRPALLERMPIMEKSATNGPAEIVQTN---GETDAPILDT--K 614
Query: 833 YPNKYETIISTLCENLDTL 851
+P IS + LD L
Sbjct: 615 HPPNIPQPISQANDLLDLL 633
Score = 38 (18.4 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 13/70 (18%), Positives = 31/70 (44%)
Query: 800 LDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARAS 859
+D ++R+ + A + V I +I + + + + L +++ +P + +
Sbjct: 421 IDTIMRVLTTAGSYVRDDSVPNLIQLITNSVEMHAYTVQRLYKALLDDIS--QQPLVQVA 478
Query: 860 MIWIIGEYAE 869
W IGEY +
Sbjct: 479 S-WCIGEYGD 487
>UNIPROTKB|F1MF68 [details] [associations]
symbol:AP1G1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0044431 "Golgi apparatus part" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0030131 SUPFAM:SSF49348 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 GeneTree:ENSGT00390000012618
GO:GO:0044431 EMBL:DAAA02046759 IPI:IPI00686299 UniGene:Bt.3110
Ensembl:ENSBTAT00000003599 NextBio:20868171 Uniprot:F1MF68
Length = 822
Score = 150 (57.9 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 78/383 (20%), Positives = 168/383 (43%)
Query: 447 PTDTQELVQQVLSLATQDSDNPDL-RDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGK 505
P +EL++ + + TQ + + ++ I NT Y ++ +L+ M +G
Sbjct: 4 PIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNT-YRCRNVAKLLYMHM-LGY 61
Query: 506 DVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRAL 565
+ + + + K++ YL M D+ ++ N D S ++ L
Sbjct: 62 PAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGL 121
Query: 566 AVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQL 625
A+ T+GC+ ++ L + K LK + Y+RK AA+C + +L+E FL
Sbjct: 122 ALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPAT 179
Query: 626 KDLLSDSNPMVVANAVAALSEMNEASTSGVA----LIEMNAQTINKLLTA-------LNE 674
K+LL++ N V+ +V L+EM E S +A L+ + + L+ + ++
Sbjct: 180 KNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSG 239
Query: 675 CTE-WGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAV-VLSAV--KVLMKLMEM 730
++ + QV IL L DD ++++ + + + + V +A+ + ++ +M++
Sbjct: 240 ISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDI 299
Query: 731 LPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPD-ILKHEMKVFFVKY 789
G + L + LL+++ ++YVAL ++ VQ + + +H +
Sbjct: 300 KSESG--LRVLAINILGRF--LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLK 355
Query: 790 NDPIYVKLEKLDIMIRLASQANI 812
+ + +K +++ L + NI
Sbjct: 356 DLDVSIKRRAMELSFALVNGNNI 378
Score = 102 (41.0 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 34/139 (24%), Positives = 61/139 (43%)
Query: 67 KLVYLYLMNYAKSHPDMAIMAF--STFFYQKSSSSFQCMIDIRSIPLFDLCSSVGVFVKD 124
KL+Y++++ Y + + S F K M+ + L + D
Sbjct: 52 KLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMT-NCIKND 110
Query: 125 CEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 184
S ++ LA+ T+GC+ ++ L + K LK + Y+RK AA+C + +
Sbjct: 111 LNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPE 170
Query: 185 LVEDQGFLDQLKDLLSDSN 203
L+E FL K+LL++ N
Sbjct: 171 LMEM--FLPATKNLLNEKN 187
Score = 75 (31.5 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 32/159 (20%), Positives = 71/159 (44%)
Query: 294 LLSSEPEVQYVALRNINLIVQKRPD-ILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQA 352
LL+++ ++YVAL ++ VQ + + +H + + + +K +++ L +
Sbjct: 317 LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGN 376
Query: 353 NIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQT--KYA--E 408
NI ++ EL + + +F I A K S + T++ ++ T Y +
Sbjct: 377 NIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDD 436
Query: 409 RIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRP 447
+ N +L+ + +E H Q +L AI+ + ++P
Sbjct: 437 AVPNLIQLITNSVE-MHAYTVQ---RLYKAILGDYSQQP 471
Score = 47 (21.6 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 35/164 (21%), Positives = 67/164 (40%)
Query: 658 IEMNAQTINKLLTA-LNECTEWGQVFILD-SLSNYSPKDDREAQSICERITP-RLAHANA 714
+EM+A T+ +L A L + ++ V + + Y D CE P ++
Sbjct: 449 VEMHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYG---DLLVSGQCEEEEPIQVTEDEV 505
Query: 715 AVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKR 774
+L +V L+ M G + T KL+ ++ +V + +I++ +Q+R
Sbjct: 506 LDILESV--LISNMSTSVTRG-YALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQR 562
Query: 775 PDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQA--NIAQVN 816
E F KY+ LE++ +M ++ + I Q N
Sbjct: 563 AV----EYNALFKKYDHMRSALLERMPVMEKVTTNGPTEIVQTN 602
Score = 37 (18.1 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 14/72 (19%), Positives = 32/72 (44%)
Query: 800 LDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENL--DTLDEPEAR 857
+D ++R+ + A +YV +A+ + + + + L + + D +P +
Sbjct: 419 IDTIMRVLTTAG----SYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQ 474
Query: 858 ASMIWIIGEYAE 869
+ W IGEY +
Sbjct: 475 VAA-WCIGEYGD 485
>UNIPROTKB|E2RPG3 [details] [associations]
symbol:AP1G1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0055037 "recycling endosome" evidence=IEA]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0030136 "clathrin-coated vesicle" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=IEA] [GO:0044431 "Golgi apparatus part" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0048471 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030136 GO:GO:0055037 GO:GO:0005802
GO:GO:0030131 SUPFAM:SSF49348 KO:K12391 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 CTD:164
GeneTree:ENSGT00390000012618 GO:GO:0044431 OMA:KIWYIDQ
EMBL:AAEX03004089 EMBL:AAEX03004087 EMBL:AAEX03004088
RefSeq:XP_862506.1 ProteinModelPortal:E2RPG3
Ensembl:ENSCAFT00000032187 GeneID:479666 KEGG:cfa:479666
NextBio:20854810 Uniprot:E2RPG3
Length = 822
Score = 150 (57.9 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 78/383 (20%), Positives = 168/383 (43%)
Query: 447 PTDTQELVQQVLSLATQDSDNPDL-RDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGK 505
P +EL++ + + TQ + + ++ I NT Y ++ +L+ M +G
Sbjct: 4 PIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNT-YRCRNVAKLLYMHM-LGY 61
Query: 506 DVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRAL 565
+ + + + K++ YL M D+ ++ N D S ++ L
Sbjct: 62 PAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGL 121
Query: 566 AVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQL 625
A+ T+GC+ ++ L + K LK + Y+RK AA+C + +L+E FL
Sbjct: 122 ALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPAT 179
Query: 626 KDLLSDSNPMVVANAVAALSEMNEASTSGVA----LIEMNAQTINKLLTA-------LNE 674
K+LL++ N V+ +V L+EM E S +A L+ + + L+ + ++
Sbjct: 180 KNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSG 239
Query: 675 CTE-WGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAV-VLSAV--KVLMKLMEM 730
++ + QV IL L DD ++++ + + + + V +A+ + ++ +M++
Sbjct: 240 ISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDI 299
Query: 731 LPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPD-ILKHEMKVFFVKY 789
G + L + LL+++ ++YVAL ++ VQ + + +H +
Sbjct: 300 KSESG--LRVLAINILGRF--LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLK 355
Query: 790 NDPIYVKLEKLDIMIRLASQANI 812
+ + +K +++ L + NI
Sbjct: 356 DLDVSIKRRAMELSFALVNGNNI 378
Score = 102 (41.0 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 34/139 (24%), Positives = 61/139 (43%)
Query: 67 KLVYLYLMNYAKSHPDMAIMAF--STFFYQKSSSSFQCMIDIRSIPLFDLCSSVGVFVKD 124
KL+Y++++ Y + + S F K M+ + L + D
Sbjct: 52 KLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMT-NCIKND 110
Query: 125 CEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 184
S ++ LA+ T+GC+ ++ L + K LK + Y+RK AA+C + +
Sbjct: 111 LNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPE 170
Query: 185 LVEDQGFLDQLKDLLSDSN 203
L+E FL K+LL++ N
Sbjct: 171 LMEM--FLPATKNLLNEKN 187
Score = 75 (31.5 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 32/159 (20%), Positives = 71/159 (44%)
Query: 294 LLSSEPEVQYVALRNINLIVQKRPD-ILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQA 352
LL+++ ++YVAL ++ VQ + + +H + + + +K +++ L +
Sbjct: 317 LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGN 376
Query: 353 NIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQT--KYA--E 408
NI ++ EL + + +F I A K S + T++ ++ T Y +
Sbjct: 377 NIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDD 436
Query: 409 RIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRP 447
+ N +L+ + +E H Q +L AI+ + ++P
Sbjct: 437 AVPNLIQLITNSVE-MHAYTVQ---RLYKAILGDYSQQP 471
Score = 47 (21.6 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 35/164 (21%), Positives = 67/164 (40%)
Query: 658 IEMNAQTINKLLTA-LNECTEWGQVFILD-SLSNYSPKDDREAQSICERITP-RLAHANA 714
+EM+A T+ +L A L + ++ V + + Y D CE P ++
Sbjct: 449 VEMHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYG---DLLVSGQCEEEEPIQVTEDEV 505
Query: 715 AVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKR 774
+L +V L+ M G + T KL+ ++ +V + +I++ +Q+R
Sbjct: 506 LDILESV--LISNMSTSVTRG-YALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQR 562
Query: 775 PDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQA--NIAQVN 816
E F KY+ LE++ +M ++ + I Q N
Sbjct: 563 AV----EYNALFKKYDHMRSALLERMPVMEKVTTNGPTEIVQTN 602
Score = 37 (18.1 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 14/72 (19%), Positives = 32/72 (44%)
Query: 800 LDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENL--DTLDEPEAR 857
+D ++R+ + A +YV +A+ + + + + L + + D +P +
Sbjct: 419 IDTIMRVLTTAG----SYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQ 474
Query: 858 ASMIWIIGEYAE 869
+ W IGEY +
Sbjct: 475 VAA-WCIGEYGD 485
>DICTYBASE|DDB_G0284735 [details] [associations]
symbol:copB "coatomer protein complex beta subunit"
species:44689 "Dictyostelium discoideum" [GO:0048471 "perinuclear
region of cytoplasm" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IEA;IDA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0030117 "membrane coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 InterPro:IPR016460
Pfam:PF01602 Pfam:PF07718 PIRSF:PIRSF005727 dictyBase:DDB_G0284735
GO:GO:0005794 GO:GO:0048471 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077
GenomeReviews:CM000153_GR GO:GO:0016192 GO:GO:0005198
EMBL:AAFI02000071 eggNOG:COG5096 GO:GO:0030126 PANTHER:PTHR10635
OMA:DFEWENK EMBL:AF247143 EMBL:U62960 RefSeq:XP_638375.1
ProteinModelPortal:Q23924 STRING:Q23924 PRIDE:Q23924
EnsemblProtists:DDB0191250 GeneID:8624744 KEGG:ddi:DDB_G0284735
ProtClustDB:CLSZ2430217 Uniprot:Q23924
Length = 912
Score = 106 (42.4 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 52/228 (22%), Positives = 104/228 (45%)
Query: 484 GNTFYILLHLTRLVIASMTVGKDV-SALFPDVVNCMQTDNLELKKLVYLYLMNYAKSH-- 540
G T + L ++++ ++ G+ + L P ++ M +++ +KKL+ +Y K+H
Sbjct: 38 GTTEQKIETLKKVILYTIN-GEPIPQLLMPIILYVMPSNDHTIKKLLLIYWEVIEKTHLG 96
Query: 541 --PDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVR 598
I+ N+ + D N +R +R + +R ++ E L +R L++ Y R
Sbjct: 97 KLKSEMILVCNSLLNDLNHPNEFVRGSTLRFLCKLREAEVLEPLVPSVRSNLENRHAYCR 156
Query: 599 KTAAVCVAKLYDINAQLVEDQ-----GFLDQLKDLLSDSNPMVVA------NAVAALSE- 646
+ A + + +Y L+ D FL Q KD N ++ AV LS
Sbjct: 157 RNAVLAIYNIYSHFDYLIPDAPELIYNFLLQEKDASCKRNAFIMLFNCAPEKAVEYLSSV 216
Query: 647 MNEASTSGVALIEMNAQTINKLL-TALNECTEWGQ-VFILDSLSNYSP 692
++E + G L + + I K+ T+ +E +++ + +F L L++ SP
Sbjct: 217 LDEVPSFGDMLQFIVVELIRKVCKTSPSERSKYIKCIFTL--LNSSSP 262
Score = 83 (34.3 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 14/60 (23%), Positives = 31/60 (51%)
Query: 821 EAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLES 880
+ ++ ++++ YP+ E II L ENL ++ + +W+I EY +++ + S
Sbjct: 420 DVVIFLREVVETYPSLRELIIKKLIENLSSIKVSKVYRVAVWVIAEYVTCLEDLQYAMTS 479
>DICTYBASE|DDB_G0281957 [details] [associations]
symbol:ap1g1 "gamma adaptin" species:44689
"Dictyostelium discoideum" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030276 "clathrin binding" evidence=IPI]
[GO:0030130 "clathrin coat of trans-Golgi network vesicle"
evidence=IDA] [GO:0030121 "AP-1 adaptor complex" evidence=IDA]
[GO:0006895 "Golgi to endosome transport" evidence=IDA] [GO:0044431
"Golgi apparatus part" evidence=IEA] [GO:0030131 "clathrin adaptor
complex" evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0030665
"clathrin-coated vesicle membrane" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 dictyBase:DDB_G0281957
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GenomeReviews:CM000152_GR GO:GO:0008565
GO:GO:0006897 GO:GO:0030121 SUPFAM:SSF49348 HSSP:P22892
eggNOG:NOG303101 KO:K12391 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 EMBL:AY144597
EMBL:AAFI02000044 RefSeq:XP_640382.1 ProteinModelPortal:Q8I8U2
SMR:Q8I8U2 STRING:Q8I8U2 EnsemblProtists:DDB0214928 GeneID:8623337
KEGG:ddi:DDB_G0281957 OMA:NTECAYI GO:GO:0006895 Uniprot:Q8I8U2
Length = 895
Score = 145 (56.1 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 70/303 (23%), Positives = 137/303 (45%)
Query: 526 KKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEP 585
K++ YL LM ++ ++A N D +SN I +++ G I + +
Sbjct: 80 KRIGYLGLMLLLDEKQEVLLLATNCIRGDIMNSNQFIVGVSLCAFGNICSTAMARDISPE 139
Query: 586 LRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALS 645
+ K + +PY+RK AA+C ++ L E+ ++ ++K LLS+ N V+ A+ +
Sbjct: 140 IEKVISHSNPYIRKKAALCAIRVLRKVPDLTEN--YIPKIKALLSERNHAVILTALTLII 197
Query: 646 EMNEA-STSGVALIEMNAQTIN--KLLTA---LNECTEWG------QVFILDSLSNYSPK 693
E+ E ST + +M Q + K LT+ L E G QV IL L +
Sbjct: 198 EICEMDSTQIIHFKKMVPQLVRILKSLTSSGYLPEHDIGGVTDPFLQVKIL-RLLRILGQ 256
Query: 694 DDREAQSICERITPRLAHANAAVVLSAVKVLMKLME-MLPGEGDFVSTLTKKLAPPLVT- 751
+D EA I +++ + +L + ++ ++ E + + L K +A ++
Sbjct: 257 NDPEASDAMNDILAQVSTNTDSTKNVGNAILYECVQTIMTIESE--NGL-KVMAINILGR 313
Query: 752 -LLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDP-IYVKLEKLDIMIRLASQ 809
LL+ + ++YVAL ++ +V ++ DP + ++ LD++ L ++
Sbjct: 314 FLLNRDNNIRYVALNTLSRVVNTDIQAVQRHRNTIVECLKDPDVSIRCRALDLIYSLVTE 373
Query: 810 ANI 812
+NI
Sbjct: 374 SNI 376
Score = 41 (19.5 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 16/73 (21%), Positives = 30/73 (41%)
Query: 799 KLDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENL--DTLDEPEA 856
++D ++R+ S A N++ E + + P + L L D +P
Sbjct: 416 QIDTILRVMSIAG----NFIPDEVPSNLIQLISSTPELSSYAVQKLYLALKQDITQQPLT 471
Query: 857 RASMIWIIGEYAE 869
+ + W IGEY +
Sbjct: 472 QVGL-WCIGEYGD 483
>ZFIN|ZDB-GENE-030616-587 [details] [associations]
symbol:ap1g2 "adaptor-related protein complex 1,
gamma 2 subunit" species:7955 "Danio rerio" [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030131 "clathrin
adaptor complex" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR016024 InterPro:IPR017107 Pfam:PF01602 Pfam:PF02883
PIRSF:PIRSF037094 SMART:SM00809 InterPro:IPR013041
InterPro:IPR008153 ZFIN:ZDB-GENE-030616-587 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030131 SUPFAM:SSF49348 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 GeneTree:ENSGT00390000012618
GO:GO:0044431 EMBL:FP017218 IPI:IPI00610034
Ensembl:ENSDART00000076503 ArrayExpress:F1QYF4 Bgee:F1QYF4
Uniprot:F1QYF4
Length = 831
Score = 136 (52.9 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 81/410 (19%), Positives = 170/410 (41%)
Query: 421 LEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQDSDNPDL-RDRGFIYWR 479
+ G N + LQLL ++ ++ QE+++ + S TQ + + ++ I +
Sbjct: 7 IRGCTSYNFNMMLQLLDPVMTPSVR----LQEMIRVIRSARTQGEERGIIQKECAEIRAQ 62
Query: 480 LLSTGNTFYILLH-LTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAK 538
T N H L +L+ M +G + V + + K++ YL M
Sbjct: 63 FRQTDNGERS--HSLAKLLYVHM-LGYPAHFGQMECVRLIASPRYSEKRIGYLGAMMLLD 119
Query: 539 SHPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVR 598
D +++ N+ D S+ +++LA+ T+ C+ ++ L + + L+ Y++
Sbjct: 120 EKQDASLLITNSIKNDLSHSSQYVQSLALCTLACMGSSEMCRDLAPEIERLLRASTSYIK 179
Query: 599 KTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALI 658
K A +C + +L E F + LLS+ N V+ AV ++E+ E + +
Sbjct: 180 KKATLCAVHIIRKVPELAEL--FTPSARSLLSEKNHGVLHGAVVLITELCERNAETLDKF 237
Query: 659 EMNAQ---TINKLLTALNECTEWG---------QVFILDSLSNYSPKDDREAQSICERIT 706
TI K L + E QV IL L +D + ++ + +
Sbjct: 238 RKAVPELVTIMKGLVTSSYSPEHNVAGISDPFLQVRILRLLRILGHNNDSASDAMNDLLA 297
Query: 707 PRLAHANAAVVL-SAV--KVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVA 763
+ +++ SAV + ++ +M++ G + L + LL+++ ++Y++
Sbjct: 298 QVATNTDSSKTAGSAVLYETVLTIMDINSESG--LRVLAVNILGRF--LLNNDRNIRYIS 353
Query: 764 LRNINLIVQKRPD-ILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANI 812
+ ++ IVQ + + +H + + VK L++ + L S NI
Sbjct: 354 MTSLQKIVQTDHNAVQRHRGTIVDCLKDQDTSVKRRALELSLALVSPVNI 403
Score = 93 (37.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 33/153 (21%), Positives = 68/153 (44%)
Query: 59 QTDNLE----LKKLVYLYLMNYAKSHPDM-AIMAFSTFFYQKSSSSF---QCMIDIRSIP 110
QTDN E L KL+Y++++ Y M + ++ Y + + ++D +
Sbjct: 65 QTDNGERSHSLAKLLYVHMLGYPAHFGQMECVRLIASPRYSEKRIGYLGAMMLLDEKQDA 124
Query: 111 LFDLCSSVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKT 170
+ +S+ D S+ +++LA+ T+ C+ ++ L + + L+ Y++K
Sbjct: 125 SLLITNSIK---NDLSHSSQYVQSLALCTLACMGSSEMCRDLAPEIERLLRASTSYIKKK 181
Query: 171 AAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSN 203
A +C + +L E F + LLS+ N
Sbjct: 182 ATLCAVHIIRKVPELAEL--FTPSARSLLSEKN 212
Score = 89 (36.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 36/165 (21%), Positives = 73/165 (44%)
Query: 294 LLSSEPEVQYVALRNINLIVQKRPD-ILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQA 352
LL+++ ++Y+++ ++ IVQ + + +H + + VK L++ + L S
Sbjct: 342 LLNNDRNIRYISMTSLQKIVQTDHNAVQRHRGTIVDCLKDQDTSVKRRALELSLALVSPV 401
Query: 353 NIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKYAERIDN 412
NI ++ EL + + V+ + I A + S + T+L ++ T D
Sbjct: 402 NIRSMMKELLIFLSSCPVELRSQTASGIFNAAERYSPSKRWHIDTILHVLTTAGG---DV 458
Query: 413 ADELLESFLEGFHDENTQVQLQLLTAIVKLF--LKRPTDTQELVQ 455
DE + + ++ T +L T + KL+ L + Q LVQ
Sbjct: 459 RDETVPNLIQLI---TTASELHCYT-VHKLYRALVKDISQQSLVQ 499
>UNIPROTKB|I3LM40 [details] [associations]
symbol:AP4E1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 Pfam:PF01602 Pfam:PF07718
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 GeneTree:ENSGT00390000012618
GO:GO:0030126 InterPro:IPR017109 PANTHER:PTHR22780:SF6
PIRSF:PIRSF037097 EMBL:CU407241 EMBL:CU915459
Ensembl:ENSSSCT00000025088 Uniprot:I3LM40
Length = 1131
Score = 146 (56.5 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 79/385 (20%), Positives = 169/385 (43%)
Query: 493 LTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFV 552
+ RL+ M +G D S + + Q NL K++ YL + + + ++ ++ VNT V
Sbjct: 81 MVRLIYCEM-LGYDASFGYIHAIKLAQQGNLLEKRVGYLAVSLFLHENHELLLLLVNTVV 139
Query: 553 KDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDIN 612
KD + +N + +A+ + I ++ + + L+ +R+ A + + K + I
Sbjct: 140 KDLQSTNLVEVCMALTIVSQIFPREMIPAVLPLIEDKLQHSKEIIRRKAVLALYKFHLIA 199
Query: 613 AQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGV-----ALIEMNAQTIN- 666
V Q + + L D + V+A ++ M + ++S + + + Q +
Sbjct: 200 PNQV--QHIHIKFRKALCDRDVGVMAASLHIYLRMIKENSSAFKDLTGSFVTILKQVVGG 257
Query: 667 KLLTALNECT---EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHA--NAAVVLSAV 721
KL N + W Q+ +L L D R ++ + + + L A N V + +
Sbjct: 258 KLPVDFNYHSVPAPWLQIQLLRILGLLGKDDQRTSELMYDVLDESLRRAELNHNVTYAIL 317
Query: 722 KVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDI-LKH 780
+ + + + + + K + +LS + ++Y+ L+ + ++Q+ P + L+H
Sbjct: 318 FECVHTVYSIYPKSELLEKAAKCIGK---FVLSPKINLKYLGLKALTYVIQQDPTLALQH 374
Query: 781 EMKVF-FVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYET 839
+M + + + DPI +K E L+++ R+ + NI +VQ+ + ++ +K E
Sbjct: 375 QMTIIECLDHPDPI-IKRETLELLYRITNAQNIT---VIVQKMLEYLQQ------SKEEY 424
Query: 840 IISTLCENLDTLDEPEARASMIWII 864
II L + L E A + W I
Sbjct: 425 IIVNLVGKIAELAEKYAPDNA-WFI 448
Score = 42 (19.8 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 860 MIWIIGEYAERID 872
M W++GEY+ +D
Sbjct: 514 MSWVLGEYSYLLD 526
>UNIPROTKB|F1RYM9 [details] [associations]
symbol:AP4E1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 Pfam:PF01602 Pfam:PF07718
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 GeneTree:ENSGT00390000012618
OMA:KYAPDNA GO:GO:0030126 InterPro:IPR017109 PANTHER:PTHR22780:SF6
PIRSF:PIRSF037097 EMBL:CU407241 EMBL:CU915459
Ensembl:ENSSSCT00000005118 Uniprot:F1RYM9
Length = 1139
Score = 146 (56.5 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 79/385 (20%), Positives = 169/385 (43%)
Query: 493 LTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFV 552
+ RL+ M +G D S + + Q NL K++ YL + + + ++ ++ VNT V
Sbjct: 81 MVRLIYCEM-LGYDASFGYIHAIKLAQQGNLLEKRVGYLAVSLFLHENHELLLLLVNTVV 139
Query: 553 KDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDIN 612
KD + +N + +A+ + I ++ + + L+ +R+ A + + K + I
Sbjct: 140 KDLQSTNLVEVCMALTIVSQIFPREMIPAVLPLIEDKLQHSKEIIRRKAVLALYKFHLIA 199
Query: 613 AQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGV-----ALIEMNAQTIN- 666
V Q + + L D + V+A ++ M + ++S + + + Q +
Sbjct: 200 PNQV--QHIHIKFRKALCDRDVGVMAASLHIYLRMIKENSSAFKDLTGSFVTILKQVVGG 257
Query: 667 KLLTALNECT---EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHA--NAAVVLSAV 721
KL N + W Q+ +L L D R ++ + + + L A N V + +
Sbjct: 258 KLPVDFNYHSVPAPWLQIQLLRILGLLGKDDQRTSELMYDVLDESLRRAELNHNVTYAIL 317
Query: 722 KVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDI-LKH 780
+ + + + + + K + +LS + ++Y+ L+ + ++Q+ P + L+H
Sbjct: 318 FECVHTVYSIYPKSELLEKAAKCIGK---FVLSPKINLKYLGLKALTYVIQQDPTLALQH 374
Query: 781 EMKVF-FVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYET 839
+M + + + DPI +K E L+++ R+ + NI +VQ+ + ++ +K E
Sbjct: 375 QMTIIECLDHPDPI-IKRETLELLYRITNAQNIT---VIVQKMLEYLQQ------SKEEY 424
Query: 840 IISTLCENLDTLDEPEARASMIWII 864
II L + L E A + W I
Sbjct: 425 IIVNLVGKIAELAEKYAPDNA-WFI 448
Score = 42 (19.8 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 860 MIWIIGEYAERID 872
M W++GEY+ +D
Sbjct: 514 MSWVLGEYSYLLD 526
>UNIPROTKB|H3BUN9 [details] [associations]
symbol:AP1G1 "AP-1 complex subunit gamma-1" species:9606
"Homo sapiens" [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017107 Pfam:PF01602 GO:GO:0005794 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 PANTHER:PTHR22780:SF5 EMBL:AC009097
EMBL:AC010653 HGNC:HGNC:555 ChiTaRS:AP1G1 ProteinModelPortal:H3BUN9
SMR:H3BUN9 Ensembl:ENST00000565009 Bgee:H3BUN9 Uniprot:H3BUN9
Length = 208
Score = 124 (48.7 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 43/188 (22%), Positives = 83/188 (44%)
Query: 447 PTDTQELVQQVLSLATQDSDNPDL-RDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGK 505
P +EL++ + + TQ + + ++ I NT Y ++ +L+ M +G
Sbjct: 4 PIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNT-YRCRNVAKLLYMHM-LGY 61
Query: 506 DVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRAL 565
+ + + + K++ YL M D+ ++ N D S ++ L
Sbjct: 62 PAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGL 121
Query: 566 AVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQL 625
A+ T+GC+ ++ L + K LK + Y+RK AA+C + +L+E FL
Sbjct: 122 ALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPAT 179
Query: 626 KDLLSDSN 633
K+LL++ N
Sbjct: 180 KNLLNEKN 187
>TAIR|locus:2162419 [details] [associations]
symbol:alpha-ADR "alpha-adaptin" species:3702
"Arabidopsis thaliana" [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA;IDA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR002553
InterPro:IPR003164 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013038 InterPro:IPR015873 InterPro:IPR016024
InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296 Pfam:PF02883
PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041 GO:GO:0005886
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0008565 GO:GO:0006897 GO:GO:0005905
GO:GO:0008289 GO:GO:0030131 SUPFAM:SSF55711 SUPFAM:SSF49348
eggNOG:NOG303101 PROSITE:PS50180 EMBL:AB006699 EMBL:AB024030
EMBL:AY099568 EMBL:AK318657 EMBL:AK319011 IPI:IPI00528626
IPI:IPI00969742 IPI:IPI00969758 RefSeq:NP_197669.1
RefSeq:NP_851057.1 RefSeq:NP_851058.1 UniGene:At.46641 HSSP:P17427
ProteinModelPortal:Q8LPL6 SMR:Q8LPL6 IntAct:Q8LPL6 STRING:Q8LPL6
PaxDb:Q8LPL6 PRIDE:Q8LPL6 EnsemblPlants:AT5G22770.1
EnsemblPlants:AT5G22770.2 EnsemblPlants:AT5G22770.3 GeneID:832340
KEGG:ath:AT5G22770 TAIR:At5g22770 HOGENOM:HOG000170596
InParanoid:Q8LPL6 KO:K11824 OMA:PNKQAQM PhylomeDB:Q8LPL6
ProtClustDB:CLSN2687597 Genevestigator:Q8LPL6 Gene3D:2.60.40.1030
Gene3D:3.30.310.30 Uniprot:Q8LPL6
Length = 1012
Score = 136 (52.9 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 72/322 (22%), Positives = 134/322 (41%)
Query: 503 VGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLI 562
+G DV + V+ + K++ Y+ + D +A+NT D N
Sbjct: 62 LGYDVDFGHMEAVSLISAPKYPEKQVGYIVTSCLLNENHDFLKLAINTVRNDIIGRNETF 121
Query: 563 RALAVRTMGCIRVDKITEYLCEPLRKCLKDED--PYVRKTAAVCVAKLYDINAQLVEDQG 620
+ LA+ +G I E L ++K L P VRK AA+C+ +L+ N V G
Sbjct: 122 QCLALTLVGNIGGRDFAESLAPDVQKLLISSSCRPLVRKKAALCLLRLFRKNPDAVNVDG 181
Query: 621 FLDQLKDLLSDSNPMVVANA----VAALSEMNEASTSG----VALIEMNA--QTINKLLT 670
+ D++ LL + + V+ ++ VA +S +EA +S V ++E A Q + + T
Sbjct: 182 WADRMAQLLDERDLGVLTSSTSLLVALVSNNHEAYSSCLPKCVKILERLARNQDVPQEYT 241
Query: 671 ALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVK------VL 724
+ W QV + +L + +D + + R+ VV + K VL
Sbjct: 242 YYGIPSPWLQVKAMRALQYFPTIEDPSTRKALFEVLQRIL-MGTDVVKNVNKNNASHAVL 300
Query: 725 MKLMEMLPGEGDFVSTLTKKLAPPLVTLLS-SEPEVQYVALRNINLIVQKRPDILKHEMK 783
+ + ++ D + + L +S EP ++Y+ L N+ + ++ +++
Sbjct: 301 FEALSLVM-HLDAEKEMMSQCVALLGKFISVREPNIRYLGLENMTRM------LMVTDVQ 353
Query: 784 VFFVKYNDPIYVKLEKLDIMIR 805
K+ I L+ DI IR
Sbjct: 354 DIIKKHQSQIITSLKDPDISIR 375
Score = 92 (37.4 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 33/141 (23%), Positives = 61/141 (43%)
Query: 67 KLVYLYLMNYAKSHPDM-AIMAFSTFFYQKSSSSF---QCMIDIRSIPLFDLCSSVGVFV 122
K++Y++++ Y M A+ S Y + + C+++ + L ++
Sbjct: 55 KMLYIHMLGYDVDFGHMEAVSLISAPKYPEKQVGYIVTSCLLN-ENHDFLKL--AINTVR 111
Query: 123 KDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDED--PYVRKTAAVCVAKLYD 180
D N + LA+ +G I E L ++K L P VRK AA+C+ +L+
Sbjct: 112 NDIIGRNETFQCLALTLVGNIGGRDFAESLAPDVQKLLISSSCRPLVRKKAALCLLRLFR 171
Query: 181 INAQLVEDQGFLDQLKDLLSD 201
N V G+ D++ LL +
Sbjct: 172 KNPDAVNVDGWADRMAQLLDE 192
Score = 87 (35.7 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 27/108 (25%), Positives = 52/108 (48%)
Query: 298 EPEVQYVALRNIN--LIVQKRPDILKHEMKVFFVKYNDP-IYVKLEKLDIMIRLASQANI 354
EP ++Y+ L N+ L+V DI+K DP I ++ LD++ + +N
Sbjct: 332 EPNIRYLGLENMTRMLMVTDVQDIIKKHQSQIITSLKDPDISIRRRALDLLYGMCDVSNA 391
Query: 355 AQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI 402
++ EL +Y + + +R+ + + AI E+ A +S +D+I
Sbjct: 392 KDIVEELLQYLSTAEFS-MREELSL--KAAILAEKFAPD-LSWYVDVI 435
>TAIR|locus:2157510 [details] [associations]
symbol:AT5G22780 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=IEA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR002553
InterPro:IPR003164 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013038 InterPro:IPR015873 InterPro:IPR016024
InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296 Pfam:PF02883
PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041 GO:GO:0005886
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GO:GO:0008565 GO:GO:0006897 GO:GO:0005905
GO:GO:0008289 GO:GO:0030131 SUPFAM:SSF55711 SUPFAM:SSF49348
eggNOG:NOG303101 PROSITE:PS50180 EMBL:AB024030 UniGene:At.46641
HSSP:P17427 HOGENOM:HOG000170596 KO:K11824 ProtClustDB:CLSN2687597
Gene3D:2.60.40.1030 Gene3D:3.30.310.30 EMBL:AB025618 EMBL:AY099646
IPI:IPI00547724 RefSeq:NP_197670.1 UniGene:At.49048
ProteinModelPortal:Q8LPK4 SMR:Q8LPK4 IntAct:Q8LPK4 STRING:Q8LPK4
PaxDb:Q8LPK4 PRIDE:Q8LPK4 EnsemblPlants:AT5G22780.1 GeneID:832341
KEGG:ath:AT5G22780 TAIR:At5g22780 InParanoid:Q8LPK4 OMA:KPALHET
PhylomeDB:Q8LPK4 Genevestigator:Q8LPK4 Uniprot:Q8LPK4
Length = 1013
Score = 136 (52.9 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 72/322 (22%), Positives = 134/322 (41%)
Query: 503 VGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLI 562
+G DV + V+ + K++ Y+ + D +A+NT D N
Sbjct: 62 LGYDVDFGHMEAVSLISAPKYPEKQVGYIVTSCLLNENHDFLKLAINTVRNDIIGRNETF 121
Query: 563 RALAVRTMGCIRVDKITEYLCEPLRKCLKDED--PYVRKTAAVCVAKLYDINAQLVEDQG 620
+ LA+ +G I E L ++K L P VRK AA+C+ +L+ N V G
Sbjct: 122 QCLALTLVGNIGGRDFAESLAPDVQKLLISSSCRPLVRKKAALCLLRLFRKNPDAVNVDG 181
Query: 621 FLDQLKDLLSDSNPMVVANA----VAALSEMNEASTSG----VALIEMNA--QTINKLLT 670
+ D++ LL + + V+ ++ VA +S +EA +S V ++E A Q + + T
Sbjct: 182 WADRMAQLLDERDLGVLTSSTSLLVALVSNNHEAYSSCLPKCVKILERLARNQDVPQEYT 241
Query: 671 ALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVK------VL 724
+ W QV + +L + +D + + R+ VV + K VL
Sbjct: 242 YYGIPSPWLQVKAMRALQYFPTIEDPSTRKALFEVLQRIL-MGTDVVKNVNKNNASHAVL 300
Query: 725 MKLMEMLPGEGDFVSTLTKKLAPPLVTLLS-SEPEVQYVALRNINLIVQKRPDILKHEMK 783
+ + ++ D + + L +S EP ++Y+ L N+ + ++ +++
Sbjct: 301 FEALSLVM-HLDAEKEMMSQCVALLGKFISVREPNIRYLGLENMTRM------LMVTDVQ 353
Query: 784 VFFVKYNDPIYVKLEKLDIMIR 805
K+ I L+ DI IR
Sbjct: 354 DIIKKHQSQIITSLKDPDISIR 375
Score = 92 (37.4 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 33/141 (23%), Positives = 61/141 (43%)
Query: 67 KLVYLYLMNYAKSHPDM-AIMAFSTFFYQKSSSSF---QCMIDIRSIPLFDLCSSVGVFV 122
K++Y++++ Y M A+ S Y + + C+++ + L ++
Sbjct: 55 KMLYIHMLGYDVDFGHMEAVSLISAPKYPEKQVGYIVTSCLLN-ENHDFLKL--AINTVR 111
Query: 123 KDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDED--PYVRKTAAVCVAKLYD 180
D N + LA+ +G I E L ++K L P VRK AA+C+ +L+
Sbjct: 112 NDIIGRNETFQCLALTLVGNIGGRDFAESLAPDVQKLLISSSCRPLVRKKAALCLLRLFR 171
Query: 181 INAQLVEDQGFLDQLKDLLSD 201
N V G+ D++ LL +
Sbjct: 172 KNPDAVNVDGWADRMAQLLDE 192
Score = 87 (35.7 bits), Expect = 0.00036, Sum P(2) = 0.00036
Identities = 27/108 (25%), Positives = 52/108 (48%)
Query: 298 EPEVQYVALRNIN--LIVQKRPDILKHEMKVFFVKYNDP-IYVKLEKLDIMIRLASQANI 354
EP ++Y+ L N+ L+V DI+K DP I ++ LD++ + +N
Sbjct: 332 EPNIRYLGLENMTRMLMVTDVQDIIKKHQSQIITSLKDPDISIRRRALDLLYGMCDVSNA 391
Query: 355 AQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLI 402
++ EL +Y + + +R+ + + AI E+ A +S +D+I
Sbjct: 392 KDIVEELLQYLSTAEFS-MREELSL--KAAILAEKFAPD-LSWYVDVI 435
>UNIPROTKB|E1BNA3 [details] [associations]
symbol:LOC536144 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] InterPro:IPR002553
InterPro:IPR011710 InterPro:IPR016024 Pfam:PF01602 Pfam:PF07718
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0016192 GO:GO:0005198 GeneTree:ENSGT00390000012618 KO:K12400
OMA:KYAPDNA GO:GO:0030126 InterPro:IPR017109 PANTHER:PTHR22780:SF6
PIRSF:PIRSF037097 EMBL:DAAA02029063 IPI:IPI00923849
RefSeq:XP_003586629.1 Ensembl:ENSBTAT00000061383 GeneID:536144
KEGG:bta:536144 Uniprot:E1BNA3
Length = 1138
Score = 148 (57.2 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 80/385 (20%), Positives = 167/385 (43%)
Query: 493 LTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFV 552
+ RL+ M +G D S + + Q NL K++ YL + + ++ ++ VNT V
Sbjct: 81 MVRLIYCEM-LGYDASFGYIHAIKLAQQGNLLEKRVGYLAVSLFLHESHELLLLLVNTVV 139
Query: 553 KDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDIN 612
KD + +N + +A+ + I ++ + + L+ +R+ A + + K Y I
Sbjct: 140 KDLQSTNLVEVCMALTIVSQIFPREMIPAVLPLIEDKLQHSKEIIRRKAVLALYKFYLIA 199
Query: 613 AQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGV-----ALIEMNAQTIN- 666
V Q + + L D + V+A ++ M + ++S + + + Q +
Sbjct: 200 PNQV--QHIHVKFRKALCDRDVGVMAASLHIYLRMIKENSSAYKDLTGSFVTILKQVVGG 257
Query: 667 KLLTALNECT---EWGQVFILDSLSNYSPKDDREAQSICERITP--RLAHANAAVVLSAV 721
KL N + W Q+ +L L D R ++ + + + R A N V + +
Sbjct: 258 KLPVDFNYHSVPAPWLQIQLLRILGLLGKDDQRTSELMYDVLDESLRTAELNHNVTYAIL 317
Query: 722 KVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRP-DILKH 780
+ + + + + + K + +LS + ++Y+ L+ + ++Q+ P L+H
Sbjct: 318 FECVHTVYSIYPKSELLEKAAKCIGK---FVLSPKINLKYLGLKALTYVIQQDPTQALQH 374
Query: 781 EMKVF-FVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYET 839
+M + + + DPI +K E L+++ R+ + NI +VQ+ + + + +K E
Sbjct: 375 QMTIIECLDHPDPI-IKRETLELLYRITNAQNIT---VIVQKMLEYL------HQSKEEY 424
Query: 840 IISTLCENLDTLDEPEARASMIWII 864
II L + L E A + W I
Sbjct: 425 IIVNLVGKIAELAEKYAPDNA-WFI 448
Score = 38 (18.4 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 5/9 (55%), Positives = 8/9 (88%)
Query: 860 MIWIIGEYA 868
M W++GEY+
Sbjct: 514 MSWVLGEYS 522
>DICTYBASE|DDB_G0289371 [details] [associations]
symbol:copG "adaptin N-terminal domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030126 "COPI
vesicle coat" evidence=IEA;ISS] [GO:0030117 "membrane coat"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0005798 "Golgi-associated vesicle" evidence=IEA]
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0006891
"intra-Golgi vesicle-mediated transport" evidence=ISS] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0030663
"COPI-coated vesicle membrane" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR002553 InterPro:IPR009028
InterPro:IPR013040 InterPro:IPR014863 InterPro:IPR015873
InterPro:IPR016024 Pfam:PF01602 Pfam:PF08752 InterPro:IPR013041
dictyBase:DDB_G0289371 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 PROSITE:PS50077 GO:GO:0005198
GenomeReviews:CM000154_GR EMBL:AAFI02000139 GO:GO:0006891
SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:3.30.310.30 GO:GO:0030126
eggNOG:COG5240 Gene3D:2.60.40.1480 InterPro:IPR017106
PANTHER:PTHR10261 PIRSF:PIRSF037093 HSSP:P53620 RefSeq:XP_636291.1
ProteinModelPortal:Q54HL0 IntAct:Q54HL0 STRING:Q54HL0 PRIDE:Q54HL0
EnsemblProtists:DDB0233801 GeneID:8627109 KEGG:ddi:DDB_G0289371
OMA:EMSSISE ProtClustDB:CLSZ2429791 Uniprot:Q54HL0
Length = 898
Score = 134 (52.2 bits), Expect = 6.7e-05, P = 6.7e-05
Identities = 69/349 (19%), Positives = 150/349 (42%)
Query: 506 DVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRAL 565
+ + +F Q+ ++ L++L+YL L + D AI+ +++ KD L RA
Sbjct: 63 EATDIFFAATKLFQSKDIPLRRLMYLLLKELSTISQD-AIIVISSLTKDMSHKIELYRAN 121
Query: 566 AVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQL 625
A+R + I I + ++ + ++DP+V A V L + ++V+ + +++
Sbjct: 122 AIRILCKITDSSILPQIERYFKQSIVEKDPHVSSAALVSSIHLLKVCPEIVKR--WANEV 179
Query: 626 KDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTEWGQVFILD 685
++ +S+ + MV +A+A L + + V+ + N + +L + + Q +++
Sbjct: 180 QEAISNKSNMVQYHALALLHRIKQHDRLAVSKLVSNL-----IKNSLR--SPYAQSYLIR 232
Query: 686 SLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKL 745
+ + E + E I L N V A + + + E + + +
Sbjct: 233 CCVEVIEETNTEDRIFREYIESCLRSKNEMVAYEAARSICTFKNVSNKEINSAVGVLQNF 292
Query: 746 APPLVTLLSSEPEVQYVALRNINLIVQKRPDIL---KHEMKVFFVKYNDPI-------YV 795
L S++P +++ A+R +N + Q P + +M+ N I +
Sbjct: 293 ------LNSTKPTLRFAAVRTLNKLAQTNPTAVIPCNLDMENLITDTNRSIATLAITTLL 346
Query: 796 KLEKLDIMIRLASQ-AN-IAQVNYVVQEAIV-VIKDIFRKYPNKYETII 841
K+ + RL Q AN + +N + +V I + +K+P KY+ +I
Sbjct: 347 KVGNESNVERLIKQIANFLGDINDEFKIVVVDAITSLSQKFPKKYKHLI 395
>UNIPROTKB|E9PR62 [details] [associations]
symbol:AP2A2 "AP-2 complex subunit alpha-2" species:9606
"Homo sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030117 "membrane coat" evidence=IEA]
InterPro:IPR002553 InterPro:IPR016024 Pfam:PF01602 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 HGNC:HGNC:562 ChiTaRS:AP2A2 EMBL:AP006623
EMBL:AP006477 IPI:IPI00984039 ProteinModelPortal:E9PR62 SMR:E9PR62
Ensembl:ENST00000534328 ArrayExpress:E9PR62 Bgee:E9PR62
Uniprot:E9PR62
Length = 378
Score = 128 (50.1 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 49/206 (23%), Positives = 91/206 (44%)
Query: 503 VGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVK-DCEDSNPL 561
+G D+ + VN + ++ K++ YL++ S+ ++ I +N +K D NP
Sbjct: 68 LGHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSEL-IRLINNAIKNDLASRNPT 126
Query: 562 IRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPY--VRKTAAVCVAKLYDINAQLVEDQ 619
LA+ + + ++ E + K L D V+++AA+C+ +LY + LV
Sbjct: 127 FMGLALHCIASVGSREMAEAFAGEIPKVLVAGDTMDSVKQSAALCLLRLYRTSPDLVPMG 186
Query: 620 GFLDQLKDLLSDSNPMVVANA---VAALSEMN--EASTSGVALIEMNAQTINKLLTALNE 674
+ ++ LL+D + VV A + L++ N E TS + ++ + T L +
Sbjct: 187 DWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSASTDLQD 246
Query: 675 CT------EWGQVFILDSLSNYSPKD 694
T W V +L L Y P D
Sbjct: 247 YTYYFVPAPWLSVKLLRLLQCYPPPD 272
>ASPGD|ASPL0000017338 [details] [associations]
symbol:AN8291 species:162425 "Emericella nidulans"
[GO:0030117 "membrane coat" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR002553 InterPro:IPR016024 InterPro:IPR017105
Pfam:PF01602 PIRSF:PIRSF037092 GO:GO:0005794 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117
GO:GO:0016192 GO:GO:0008565 EMBL:BN001302 OMA:ASQSFYK
EnsemblFungi:CADANIAT00004352 HOGENOM:HOG000179695 Uniprot:C8V3R4
Length = 934
Score = 124 (48.7 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 71/330 (21%), Positives = 132/330 (40%)
Query: 493 LTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFV 552
L +L M G D+S +V+ M + K++ YL + + ++ ++A N
Sbjct: 8 LLKLAYLEM-FGYDMSWASFNVLEVMSSSKFLQKRVGYLGALQSFRPETEVLMLATNLLK 66
Query: 553 KDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL---Y 609
KD SN I +L + T+ I + L + + P +RK A VC+ +L Y
Sbjct: 67 KDMVCSNLQIISLPLNTLPNIITPSLAMSLLPDVLSRISHSSPSIRKKAVVCLYRLALVY 126
Query: 610 DINAQLVEDQGFLDQLKDLLSDSN-PMVVANAVAALSEMNEASTSGVALIEMNAQTINKL 668
+L + D+L D DS+ V N V L + + + L
Sbjct: 127 PEALRLAWPR-LKDRLMDETEDSSVTTAVLNVVCELGWRRPHD-----FLPLAPRFFELL 180
Query: 669 LTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAV-KVLMKL 727
+ N W + I+ + +P + R + + I P + +S + + + +
Sbjct: 181 VEGGNN---WMSIKIIKLFATLTPLEPRLVRKL---IRPLINIVQTTTAMSLLYECINGI 234
Query: 728 ME--MLPGEG------DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILK 779
++ +L GEG + KL +VT +P ++YVAL + IV P ++
Sbjct: 235 IQGGILEGEGALEDSHEIADLCVSKLRGMVVT--DFDPNLKYVALLAFSRIVVSHPHLIS 292
Query: 780 HEMKVFFVKYNDP-IYVKLEKLDIMIRLAS 808
V D I ++L+ L++ R+ +
Sbjct: 293 MHQDVIMNCLEDADISIRLQALELAARMVT 322
Score = 59 (25.8 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 8/24 (33%), Positives = 17/24 (70%)
Query: 860 MIWIIGEYAERIDNADELLESFLE 883
+ W++GEYAE + + +L+S ++
Sbjct: 491 LAWVVGEYAEYLSSPGPMLQSLID 514
>UNIPROTKB|F1S3C7 [details] [associations]
symbol:AP1G1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055037 "recycling endosome" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0030136
"clathrin-coated vesicle" evidence=IEA] [GO:0019894 "kinesin
binding" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=IEA] [GO:0044431 "Golgi apparatus part" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0008565 "protein
transporter activity" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0048471 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030136 GO:GO:0055037 GO:GO:0005802
GO:GO:0030131 SUPFAM:SSF49348 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 GeneTree:ENSGT00390000012618
GO:GO:0044431 OMA:KIWYIDQ EMBL:CU467029 EMBL:FP565416
Ensembl:ENSSSCT00000003036 Uniprot:F1S3C7
Length = 844
Score = 150 (57.9 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 78/383 (20%), Positives = 168/383 (43%)
Query: 447 PTDTQELVQQVLSLATQDSDNPDL-RDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGK 505
P +EL++ + + TQ + + ++ I NT Y ++ +L+ M +G
Sbjct: 26 PIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNT-YRCRNVAKLLYMHM-LGY 83
Query: 506 DVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRAL 565
+ + + + K++ YL M D+ ++ N D S ++ L
Sbjct: 84 PAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQGL 143
Query: 566 AVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQL 625
A+ T+GC+ ++ L + K LK + Y+RK AA+C + +L+E FL
Sbjct: 144 ALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEM--FLPAT 201
Query: 626 KDLLSDSNPMVVANAVAALSEMNEASTSGVA----LIEMNAQTINKLLTA-------LNE 674
K+LL++ N V+ +V L+EM E S +A L+ + + L+ + ++
Sbjct: 202 KNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEHDVSG 261
Query: 675 CTE-WGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAV-VLSAV--KVLMKLMEM 730
++ + QV IL L DD ++++ + + + + V +A+ + ++ +M++
Sbjct: 262 ISDPFLQVRILRLLRILGRNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDI 321
Query: 731 LPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPD-ILKHEMKVFFVKY 789
G + L + LL+++ ++YVAL ++ VQ + + +H +
Sbjct: 322 KSESG--LRVLAINILGRF--LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLK 377
Query: 790 NDPIYVKLEKLDIMIRLASQANI 812
+ + +K +++ L + NI
Sbjct: 378 DLDVSIKRRAMELSFALVNGNNI 400
Score = 102 (41.0 bits), Expect = 0.00043, Sum P(4) = 0.00043
Identities = 34/139 (24%), Positives = 61/139 (43%)
Query: 67 KLVYLYLMNYAKSHPDMAIMAF--STFFYQKSSSSFQCMIDIRSIPLFDLCSSVGVFVKD 124
KL+Y++++ Y + + S F K M+ + L + D
Sbjct: 74 KLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMT-NCIKND 132
Query: 125 CEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQ 184
S ++ LA+ T+GC+ ++ L + K LK + Y+RK AA+C + +
Sbjct: 133 LNHSTQYVQGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPE 192
Query: 185 LVEDQGFLDQLKDLLSDSN 203
L+E FL K+LL++ N
Sbjct: 193 LMEM--FLPATKNLLNEKN 209
Score = 75 (31.5 bits), Expect = 0.00043, Sum P(4) = 0.00043
Identities = 32/159 (20%), Positives = 71/159 (44%)
Query: 294 LLSSEPEVQYVALRNINLIVQKRPD-ILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQA 352
LL+++ ++YVAL ++ VQ + + +H + + + +K +++ L +
Sbjct: 339 LLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGN 398
Query: 353 NIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQT--KYA--E 408
NI ++ EL + + +F I A K S + T++ ++ T Y +
Sbjct: 399 NIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDD 458
Query: 409 RIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRP 447
+ N +L+ + +E H Q +L AI+ + ++P
Sbjct: 459 AVPNLIQLITNSVE-MHAYTVQ---RLYKAILGDYSQQP 493
Score = 47 (21.6 bits), Expect = 0.00043, Sum P(4) = 0.00043
Identities = 35/164 (21%), Positives = 67/164 (40%)
Query: 658 IEMNAQTINKLLTA-LNECTEWGQVFILD-SLSNYSPKDDREAQSICERITP-RLAHANA 714
+EM+A T+ +L A L + ++ V + + Y D CE P ++
Sbjct: 471 VEMHAYTVQRLYKAILGDYSQQPLVQVAAWCIGEYG---DLLVSGQCEEEEPIQVTEDEV 527
Query: 715 AVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKR 774
+L +V L+ M G + T KL+ ++ +V + +I++ +Q+R
Sbjct: 528 LDILESV--LISNMSTSVTRG-YALTAIMKLSTRFTCTVNRIKKVVSIYGSSIDVELQQR 584
Query: 775 PDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQA--NIAQVN 816
E F KY+ LE++ +M ++ + I Q N
Sbjct: 585 AV----EYNALFKKYDHMRSALLERMPVMEKVTTNGPTEIVQTN 624
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 7/15 (46%), Positives = 11/15 (73%)
Query: 62 NLELKKLVYLYLMNY 76
NL+ KK + YLM++
Sbjct: 4 NLKNKKCEHFYLMSF 18
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 14/72 (19%), Positives = 32/72 (44%)
Query: 800 LDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETIISTLCENL--DTLDEPEAR 857
+D ++R+ + A +YV +A+ + + + + L + + D +P +
Sbjct: 441 IDTIMRVLTTAG----SYVRDDAVPNLIQLITNSVEMHAYTVQRLYKAILGDYSQQPLVQ 496
Query: 858 ASMIWIIGEYAE 869
+ W IGEY +
Sbjct: 497 VAA-WCIGEYGD 507
>FB|FBgn0030089 [details] [associations]
symbol:AP-1gamma "Adaptor Protein complex 1, gamma subunit"
species:7227 "Drosophila melanogaster" [GO:0030135 "coated vesicle"
evidence=TAS] [GO:0016183 "synaptic vesicle coating" evidence=TAS]
[GO:0008021 "synaptic vesicle" evidence=TAS] [GO:0007269
"neurotransmitter secretion" evidence=NAS] [GO:0006901 "vesicle
coating" evidence=TAS] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0044431 "Golgi apparatus part" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0030136
"clathrin-coated vesicle" evidence=IDA] [GO:0055037 "recycling
endosome" evidence=IDA] [GO:0005802 "trans-Golgi network"
evidence=IDA] [GO:0030141 "secretory granule" evidence=IDA]
[GO:0033363 "secretory granule organization" evidence=IMP]
[GO:0048749 "compound eye development" evidence=IMP] [GO:0035976
"AP1 complex" evidence=IMP;IPI] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR016024 InterPro:IPR017107
Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037094 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 GO:GO:0008021
EMBL:AE014298 GO:GO:0030141 GO:GO:0055037 GO:GO:0005802
GO:GO:0007269 GO:GO:0030131 SUPFAM:SSF49348 KO:K12391
Gene3D:2.60.40.1230 PANTHER:PTHR22780:SF5 PROSITE:PS50180
GeneTree:ENSGT00390000012618 GO:GO:0044431 GO:GO:0016183
GO:GO:0033363 GO:GO:0048749 GO:GO:0035976 UniGene:Dm.5374
GeneID:31842 KEGG:dme:Dmel_CG9113 CTD:31842 FlyBase:FBgn0030089
GenomeRNAi:31842 NextBio:775599 RefSeq:NP_788891.2
ProteinModelPortal:Q7KVR8 SMR:Q7KVR8 STRING:Q7KVR8 PRIDE:Q7KVR8
EnsemblMetazoa:FBtr0071296 UCSC:CG9113-RD InParanoid:Q7KVR8
OMA:LNKVVSM PhylomeDB:Q7KVR8 ArrayExpress:Q7KVR8 Bgee:Q7KVR8
Uniprot:Q7KVR8
Length = 982
Score = 130 (50.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 48/219 (21%), Positives = 101/219 (46%)
Query: 438 AIVKLFLKRPTDTQELVQQVLSLATQDSDNPDLRDRGFIYWR-LLSTGNTFYILLHLTRL 496
A+ ++ + PT ++L++Q+ + T + + ++ Y R ++ + ++ +L
Sbjct: 36 AVERVRMPTPTRLRDLIRQIRAARTAAEERAVV-NKECAYIRSTFREEDSVWRCRNIAKL 94
Query: 497 VIASMTVGKDVSALFPDVVNCMQ-TDNLEL--KKLVYLYLMNYAKSHPDMAIMAVNTFVK 553
+ M +G A F + C++ T + K++ YL M D+ ++ N
Sbjct: 95 LYIHM-LG--YPAHFGQL-ECLKLTASTRFTDKRIGYLGAMLLLDERQDVHLLITNCLKN 150
Query: 554 DCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINA 613
D S + LA+ T+G I ++ L + + +K + Y+RK A +C ++
Sbjct: 151 DLNSSTQFVVGLALCTLGAIASPEMARDLASEVERLMKSPNTYIRKKATLCAFRVIRRVP 210
Query: 614 QLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEAST 652
+L+E FL + LLS+ N ++ V ++EM E S+
Sbjct: 211 ELMEI--FLPATRSLLSEKNHGILITGVTLITEMCENSS 247
Score = 50 (22.7 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 29/142 (20%), Positives = 60/142 (42%)
Query: 739 STLTKKLAPPLVTLLSSEPEVQYVAL--RNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+T+ + L P V++ E+ + + +NI + ++ L+ F + + + +
Sbjct: 395 TTILECLKDPDVSIRRRAMELSFALINAQNIRTMTKELLLFLEKADAEFKAQCSSGMILA 454
Query: 797 LEKLDIMIR--LASQAN--IAQVNYVVQEAIVVIKDIFRKYPNKYETIIST-LCENLDTL 851
E+ R L +Q + IA NYV + + + P +T I+ E+L
Sbjct: 455 AERYSPTTRWHLDTQLSVLIAAGNYVRDDVVSSTIQLVSSSPVPEQTYITNRFWESLQVA 514
Query: 852 DEPEARASM----IWIIGEYAE 869
+ E + + +W IGEY +
Sbjct: 515 NHCEDKQPLLQVAVWAIGEYGD 536
Score = 49 (22.3 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 13/62 (20%), Positives = 27/62 (43%)
Query: 752 LLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDP-IYVKLEKLDIMIRLASQA 810
LL+S+ ++YVAL + V ++ DP + ++ +++ L +
Sbjct: 364 LLNSDKNIRYVALNTLLRTVHADTSAVQRHRTTILECLKDPDVSIRRRAMELSFALINAQ 423
Query: 811 NI 812
NI
Sbjct: 424 NI 425
>UNIPROTKB|F1RZ02 [details] [associations]
symbol:AP2A2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR008152 InterPro:IPR013038 InterPro:IPR016024
InterPro:IPR017104 Pfam:PF01602 Pfam:PF02883 PIRSF:PIRSF037091
SMART:SM00809 InterPro:IPR013041 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
GO:GO:0030131 SUPFAM:SSF49348 OMA:PNKQAQM Gene3D:2.60.40.1030
GeneTree:ENSGT00550000074757 EMBL:CU928976
Ensembl:ENSSSCT00000014031 Uniprot:F1RZ02
Length = 836
Score = 129 (50.5 bits), Expect = 0.00021, P = 0.00021
Identities = 50/207 (24%), Positives = 92/207 (44%)
Query: 503 VGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVK-DCEDSNPL 561
+G D+ + VN + ++ K++ YL++ S+ ++ I +N VK D NP
Sbjct: 97 LGHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSEL-IRLINNAVKNDLASRNPT 155
Query: 562 IRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPY--VRKTAAVCVAKLYDINAQLVEDQ 619
LA+ + + ++ E + K L D V+++AA+C+ +LY + LV
Sbjct: 156 FMGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMG 215
Query: 620 GFLDQLKDLLSDSNPMVVANA---VAALSEMN--EASTSGVALIEMNAQTINKLLTALNE 674
+ ++ LL+D + VV A + L++ N E TS + ++ + T L +
Sbjct: 216 DWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSASTDLQD 275
Query: 675 CT------EWGQVFILDSLSNYSPKDD 695
T W V +L L Y P +D
Sbjct: 276 YTYYFVPAPWLSVKLLRLLQCYPPPED 302
>UNIPROTKB|O94973 [details] [associations]
symbol:AP2A2 "AP-2 complex subunit alpha-2" species:9606
"Homo sapiens" [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0030122 "AP-2 adaptor complex"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0003674 "molecular_function" evidence=ND]
[GO:0030666 "endocytic vesicle membrane" evidence=TAS] [GO:0042059
"negative regulation of epidermal growth factor receptor signaling
pathway" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
signaling pathway" evidence=TAS] [GO:0050690 "regulation of defense
response to virus by virus" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0007173 "epidermal growth factor receptor signaling pathway"
evidence=TAS] [GO:0007268 "synaptic transmission" evidence=TAS]
[GO:0007411 "axon guidance" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0019886 "antigen processing and
presentation of exogenous peptide antigen via MHC class II"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_13685 InterPro:IPR002553 InterPro:IPR003164
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013038
InterPro:IPR015873 InterPro:IPR016024 InterPro:IPR017104
Pfam:PF01602 Pfam:PF02296 Pfam:PF02883 PIRSF:PIRSF037091
SMART:SM00809 InterPro:IPR013041 GO:GO:0005829
Reactome:REACT_111045 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0007411 GO:GO:0007173 GO:GO:0048011
GO:GO:0006886 GO:GO:0050690 GO:GO:0016032 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0019886 GO:GO:0008565
GO:GO:0007268 GO:GO:0006897 GO:GO:0008289 GO:GO:0030122
eggNOG:COG5096 SUPFAM:SSF55711 SUPFAM:SSF49348 HOGENOM:HOG000170596
KO:K11824 OMA:PNKQAQM Gene3D:2.60.40.1030 Gene3D:3.30.310.30
HOVERGEN:HBG050518 GO:GO:0042059 CTD:161 EMBL:AB020706
EMBL:AK223558 EMBL:AK027891 EMBL:BC006155 EMBL:AF049527
IPI:IPI00016621 IPI:IPI00914938 IPI:IPI00914952
RefSeq:NP_001229766.1 RefSeq:NP_036437.1 UniGene:Hs.19121
ProteinModelPortal:O94973 SMR:O94973 IntAct:O94973
MINT:MINT-1198502 STRING:O94973 PhosphoSite:O94973 PaxDb:O94973
PRIDE:O94973 DNASU:161 Ensembl:ENST00000332231
Ensembl:ENST00000448903 Ensembl:ENST00000528815 GeneID:161
KEGG:hsa:161 UCSC:uc001lss.3 UCSC:uc001lst.2 GeneCards:GC11P000915
HGNC:HGNC:562 HPA:CAB017514 MIM:607242 neXtProt:NX_O94973
PharmGKB:PA24853 InParanoid:O94973 ChiTaRS:AP2A2 GenomeRNAi:161
NextBio:643 PMAP-CutDB:O94973 ArrayExpress:O94973 Bgee:O94973
CleanEx:HS_AP2A2 Genevestigator:O94973 GermOnline:ENSG00000183020
Uniprot:O94973
Length = 939
Score = 128 (50.1 bits), Expect = 0.00031, P = 0.00031
Identities = 49/206 (23%), Positives = 91/206 (44%)
Query: 503 VGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVK-DCEDSNPL 561
+G D+ + VN + ++ K++ YL++ S+ ++ I +N +K D NP
Sbjct: 68 LGHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSEL-IRLINNAIKNDLASRNPT 126
Query: 562 IRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPY--VRKTAAVCVAKLYDINAQLVEDQ 619
LA+ + + ++ E + K L D V+++AA+C+ +LY + LV
Sbjct: 127 FMGLALHCIASVGSREMAEAFAGEIPKVLVAGDTMDSVKQSAALCLLRLYRTSPDLVPMG 186
Query: 620 GFLDQLKDLLSDSNPMVVANA---VAALSEMN--EASTSGVALIEMNAQTINKLLTALNE 674
+ ++ LL+D + VV A + L++ N E TS + ++ + T L +
Sbjct: 187 DWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSASTDLQD 246
Query: 675 CT------EWGQVFILDSLSNYSPKD 694
T W V +L L Y P D
Sbjct: 247 YTYYFVPAPWLSVKLLRLLQCYPPPD 272
>UNIPROTKB|Q66HM2 [details] [associations]
symbol:Ap2a2 "AP-2 complex subunit alpha-2" species:10116
"Rattus norvegicus" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR002553 InterPro:IPR003164 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013038 InterPro:IPR015873
InterPro:IPR016024 InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296
Pfam:PF02883 PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041
RGD:71015 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 GO:GO:0030131
SUPFAM:SSF55711 SUPFAM:SSF49348 HOGENOM:HOG000170596 KO:K11824
Gene3D:2.60.40.1030 Gene3D:3.30.310.30 HOVERGEN:HBG050518
GeneTree:ENSGT00550000074757 CTD:161 IPI:IPI00471901
UniGene:Rn.34928 PDBsum:2XA7 EMBL:AC109542 EMBL:BC081786
RefSeq:NP_112270.2 SMR:Q66HM2 IntAct:Q66HM2 MINT:MINT-3375420
STRING:Q66HM2 Ensembl:ENSRNOT00000064254 GeneID:81637
KEGG:rno:81637 InParanoid:Q66HM2 NextBio:615128
Genevestigator:Q66HM2 Uniprot:Q66HM2
Length = 939
Score = 128 (50.1 bits), Expect = 0.00031, P = 0.00031
Identities = 49/207 (23%), Positives = 92/207 (44%)
Query: 503 VGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVK-DCEDSNPL 561
+G D+ + VN + ++ K++ YL++ S+ ++ I +N +K D NP
Sbjct: 68 LGHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSEL-IRLINNAIKNDLASRNPT 126
Query: 562 IRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPY--VRKTAAVCVAKLYDINAQLVEDQ 619
LA+ + + ++ E + K L D V+++AA+C+ +LY + LV
Sbjct: 127 FMGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMG 186
Query: 620 GFLDQLKDLLSDSNPMVVANA---VAALSEMN--EASTSGVALIEMNAQTINKLLTALNE 674
+ ++ LL+D + VV A + L++ N E TS + ++ + T L +
Sbjct: 187 DWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSASTDLQD 246
Query: 675 CT------EWGQVFILDSLSNYSPKDD 695
T W V +L L Y P +D
Sbjct: 247 YTYYFVPAPWLSVKLLRLLQCYPPPED 273
>UNIPROTKB|F1NQB3 [details] [associations]
symbol:AP2A2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR003164 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013038 InterPro:IPR015873 InterPro:IPR016024
InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296 Pfam:PF02883
PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030131 SUPFAM:SSF55711 SUPFAM:SSF49348
OMA:PNKQAQM Gene3D:2.60.40.1030 Gene3D:3.30.310.30
GeneTree:ENSGT00550000074757 EMBL:AADN02030345 IPI:IPI00819995
Ensembl:ENSGALT00000039069 ArrayExpress:F1NQB3 Uniprot:F1NQB3
Length = 941
Score = 128 (50.1 bits), Expect = 0.00031, P = 0.00031
Identities = 49/207 (23%), Positives = 92/207 (44%)
Query: 503 VGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVK-DCEDSNPL 561
+G D+ + VN + ++ K++ YL++ S+ ++ I +N +K D NP
Sbjct: 70 LGHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSEL-IRLINNAIKNDLASRNPT 128
Query: 562 IRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPY--VRKTAAVCVAKLYDINAQLVEDQ 619
LA+ + + ++ E + K L D V+++AA+C+ +LY + LV
Sbjct: 129 FMGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMG 188
Query: 620 GFLDQLKDLLSDSNPMVVANA---VAALSEMN--EASTSGVALIEMNAQTINKLLTALNE 674
+ ++ LL+D + VV A + L++ N E TS + ++ + T L +
Sbjct: 189 DWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSASTDLQD 248
Query: 675 CT------EWGQVFILDSLSNYSPKDD 695
T W V +L L Y P +D
Sbjct: 249 YTYYFVPAPWLSVKLLRLLQCYPPPED 275
>GENEDB_PFALCIPARUM|PF14_0529 [details] [associations]
symbol:PF14_0529 "gamma-adaptin, putative"
species:5833 "Plasmodium falciparum" [GO:0005802 "trans-Golgi
network" evidence=ISS] [GO:0030131 "clathrin adaptor complex"
evidence=ISS] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR016024 InterPro:IPR017107 Pfam:PF01602 Pfam:PF02883
SMART:SM00809 InterPro:IPR013041 InterPro:IPR008153 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 EMBL:AE014187 GO:GO:0005802 GO:GO:0030131
SUPFAM:SSF49348 HSSP:P22892 HOGENOM:HOG000210271 KO:K12391
Gene3D:2.60.40.1230 PANTHER:PTHR22780:SF5 PROSITE:PS50180
GO:GO:0044431 RefSeq:XP_001348703.1 ProteinModelPortal:Q8IKS3
IntAct:Q8IKS3 MINT:MINT-1570028 EnsemblProtists:PF14_0529:mRNA
GeneID:812111 KEGG:pfa:PF14_0529 EuPathDB:PlasmoDB:PF3D7_1455500
OMA:SNQYING ProtClustDB:CLSZ2432934 Uniprot:Q8IKS3
Length = 1081
Score = 127 (49.8 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 36/168 (21%), Positives = 78/168 (46%)
Query: 515 VNCMQ---TDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRALAVRTMG 571
+ C++ ++ K++ YL L + D+ ++ N+ D +SN I LA+ +G
Sbjct: 66 IECLKLIASNKFSFKRIGYLGLTILLDENTDILMLVTNSIKNDLRNSNQYINGLALCALG 125
Query: 572 CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSD 631
I ++ L + + +PY++K AA+C ++ + ++ FL+++ +LL D
Sbjct: 126 NIANSEMCSSLRYEILDMMNINNPYIKKKAAMCAIRILKKTNDI--EELFLEKINNLLDD 183
Query: 632 SNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTEWG 679
N V++ ++ + + E ++ T NK++ L C G
Sbjct: 184 RNHGVLSAGISLMITLMEKKPQYKNILR--GYT-NKIVKILKSCVMSG 228
Score = 52 (23.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 33/172 (19%), Positives = 77/172 (44%)
Query: 684 LDSLSNYSPKDDREAQSICERI---TPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVST 740
+DS++N + D E S+ ++ T L + A++ VK + + PG
Sbjct: 353 MDSMNN-NIYDMEEVNSVLAQVATNTDSLKNVGNAILYECVKTITYISTD-PGLLVLAVN 410
Query: 741 LTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILK-HEMKVFFVKYNDPIYVKLEK 799
+ K L +++ ++YV L + +++K P L + + + I ++ +
Sbjct: 411 VLGKF------LQNNDNNIRYVGLCTLQKLLKKDPKTLHIYRNTIIECLKDQDISIRKKA 464
Query: 800 LDIMIRLASQANIAQVNYVVQEAI--VVIKDIFRKYPNKYETIISTLCENLD 849
LD+ L ++ ++ +V+E + +++ DI K I+S +C +++
Sbjct: 465 LDVAFALITKDSL---KIMVKELLNYLLVADIEIK-----SDIVSNICVSVN 508
>UNIPROTKB|Q8IKS3 [details] [associations]
symbol:PF14_0529 "Gamma-adaptin, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005802 "trans-Golgi network"
evidence=ISS] [GO:0030131 "clathrin adaptor complex" evidence=ISS]
InterPro:IPR002553 InterPro:IPR008152 InterPro:IPR016024
InterPro:IPR017107 Pfam:PF01602 Pfam:PF02883 SMART:SM00809
InterPro:IPR013041 InterPro:IPR008153 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565
EMBL:AE014187 GO:GO:0005802 GO:GO:0030131 SUPFAM:SSF49348
HSSP:P22892 HOGENOM:HOG000210271 KO:K12391 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 GO:GO:0044431
RefSeq:XP_001348703.1 ProteinModelPortal:Q8IKS3 IntAct:Q8IKS3
MINT:MINT-1570028 EnsemblProtists:PF14_0529:mRNA GeneID:812111
KEGG:pfa:PF14_0529 EuPathDB:PlasmoDB:PF3D7_1455500 OMA:SNQYING
ProtClustDB:CLSZ2432934 Uniprot:Q8IKS3
Length = 1081
Score = 127 (49.8 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 36/168 (21%), Positives = 78/168 (46%)
Query: 515 VNCMQ---TDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRALAVRTMG 571
+ C++ ++ K++ YL L + D+ ++ N+ D +SN I LA+ +G
Sbjct: 66 IECLKLIASNKFSFKRIGYLGLTILLDENTDILMLVTNSIKNDLRNSNQYINGLALCALG 125
Query: 572 CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSD 631
I ++ L + + +PY++K AA+C ++ + ++ FL+++ +LL D
Sbjct: 126 NIANSEMCSSLRYEILDMMNINNPYIKKKAAMCAIRILKKTNDI--EELFLEKINNLLDD 183
Query: 632 SNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTEWG 679
N V++ ++ + + E ++ T NK++ L C G
Sbjct: 184 RNHGVLSAGISLMITLMEKKPQYKNILR--GYT-NKIVKILKSCVMSG 228
Score = 52 (23.4 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 33/172 (19%), Positives = 77/172 (44%)
Query: 684 LDSLSNYSPKDDREAQSICERI---TPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVST 740
+DS++N + D E S+ ++ T L + A++ VK + + PG
Sbjct: 353 MDSMNN-NIYDMEEVNSVLAQVATNTDSLKNVGNAILYECVKTITYISTD-PGLLVLAVN 410
Query: 741 LTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILK-HEMKVFFVKYNDPIYVKLEK 799
+ K L +++ ++YV L + +++K P L + + + I ++ +
Sbjct: 411 VLGKF------LQNNDNNIRYVGLCTLQKLLKKDPKTLHIYRNTIIECLKDQDISIRKKA 464
Query: 800 LDIMIRLASQANIAQVNYVVQEAI--VVIKDIFRKYPNKYETIISTLCENLD 849
LD+ L ++ ++ +V+E + +++ DI K I+S +C +++
Sbjct: 465 LDVAFALITKDSL---KIMVKELLNYLLVADIEIK-----SDIVSNICVSVN 508
>POMBASE|SPAC144.06 [details] [associations]
symbol:apl5 "AP-3 adaptor complex subunit Apl5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IC]
[GO:0006896 "Golgi to vacuole transport" evidence=ISO] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0030123 "AP-3
adaptor complex" evidence=NAS] [GO:0030665 "clathrin-coated vesicle
membrane" evidence=IEA] InterPro:IPR002553 InterPro:IPR016024
InterPro:IPR017105 Pfam:PF01602 PIRSF:PIRSF037092
PomBase:SPAC144.06 GO:GO:0005634 GO:GO:0005794 GO:GO:0006886
EMBL:CU329670 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
PROSITE:PS50077 GenomeReviews:CU329670_GR GO:GO:0008565
GO:GO:0030665 GO:GO:0006896 GO:GO:0030123 HOGENOM:HOG000000981
eggNOG:NOG285451 PIR:T37673 RefSeq:NP_594667.2 STRING:Q9UTL8
EnsemblFungi:SPAC144.06.1 GeneID:2542857 OrthoDB:EOG4QC4DP
NextBio:20803898 Uniprot:Q9UTL8
Length = 825
Score = 135 (52.6 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 67/341 (19%), Positives = 137/341 (40%)
Query: 493 LTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFV 552
+ +L M +G D+S +V M + + K+ YL + K D+ ++ N
Sbjct: 48 ILKLAYLEM-LGVDISWASFQIVEVMSSSKILQKQKGYLAAVQSFKPDTDVLMLTTNLLK 106
Query: 553 KDCEDSN-PLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDI 611
KD S P I LA+ + + L + L PYVRK + LY +
Sbjct: 107 KDLMSSKVPEI-TLAIDGLSHFSTLGLARDLYRDVLILLNHSVPYVRKRT---ILLLYRL 162
Query: 612 NAQLVED-QGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLT 670
Q E + +L++ L D + VV AV+ + E+ + +E + L T
Sbjct: 163 CLQYPEAISACIPKLRERLDDPDTSVVNAAVSVICELARRAPKNY--LEFAPDLFHLLTT 220
Query: 671 ALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVL-SAVKVLMKLME 729
+ N W + ++ ++ +P + R + + +T + + +A +L + ++
Sbjct: 221 SSNN---WMLIKLIKLFASLTPYEPRLVKKLIPSLTDIIENTHAMSLLYECINTIVS-GN 276
Query: 730 MLPGEGDFVSTLTKKLAPPLVTLLS-SEPEVQYVALRNINLIVQKRPDILKHEMKVFFVK 788
ML G L A L ++ ++Y+AL + + P ++ ++ +
Sbjct: 277 MLVGHSQ-CDKLASLCASKLRGFFEDTDQNLKYIALLCLRKLANTHPSLVSAQLDIILKC 335
Query: 789 YNDP-IYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIKD 828
D ++L LD++ + ++ NI + + ++V D
Sbjct: 336 LVDTDTSIRLRALDLVNEIVNKENIRTIVKTLMLQLIVSSD 376
Score = 41 (19.5 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 13/41 (31%), Positives = 21/41 (51%)
Query: 342 LDIMIRLASQAN-----IAQVLSELKEYATEVDVDFVRKAV 377
+D++ + S AN IA L E ++ AT D D +A+
Sbjct: 8 IDLIKGIRSHANDEEAFIATCLLECRKEATSQDADLKSEAI 48
>UNIPROTKB|D4A101 [details] [associations]
symbol:Ap2a2 "AP-2 complex subunit alpha-2" species:10116
"Rattus norvegicus" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0008565 "protein transporter activity"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR002553 InterPro:IPR003164 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013038 InterPro:IPR015873
InterPro:IPR016024 InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296
Pfam:PF02883 PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041
RGD:71015 GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0016192 GO:GO:0008565 GO:GO:0030131
SUPFAM:SSF55711 SUPFAM:SSF49348 Gene3D:2.60.40.1030
Gene3D:3.30.310.30 EMBL:AC109542 IPI:IPI00952004
Ensembl:ENSRNOT00000026738 ArrayExpress:D4A101 Uniprot:D4A101
Length = 929
Score = 126 (49.4 bits), Expect = 0.00050, P = 0.00050
Identities = 49/206 (23%), Positives = 91/206 (44%)
Query: 503 VGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVK-DCEDSNPL 561
+G D+ + VN + ++ K++ YL++ S+ ++ I +N +K D NP
Sbjct: 59 LGHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSEL-IRLINNAIKNDLASRNPT 117
Query: 562 IRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPY--VRKTAAVCVAKLYDINAQLVEDQ 619
LA+ + + ++ E + K L D V+++AA+C+ +LY + LV
Sbjct: 118 FMGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMG 177
Query: 620 GFLDQLKDLLSDSNPMVVANA---VAALSEMN--EASTSGVALIEMNAQTINKLLTALNE 674
+ ++ LL+D + VV A + L++ N E TS + ++ + T L +
Sbjct: 178 DWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSASTDLQD 237
Query: 675 CT------EWGQVFILDSLSNYSPKD 694
T W V +L L Y P D
Sbjct: 238 YTYYFVPAPWLSVKLLRLLQCYPPPD 263
>UNIPROTKB|E1C866 [details] [associations]
symbol:AP2A2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] InterPro:IPR002553
InterPro:IPR003164 InterPro:IPR008152 InterPro:IPR009028
InterPro:IPR013038 InterPro:IPR015873 InterPro:IPR016024
InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296 Pfam:PF02883
PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0016192
GO:GO:0008565 GO:GO:0030131 SUPFAM:SSF55711 SUPFAM:SSF49348
Gene3D:2.60.40.1030 Gene3D:3.30.310.30 GeneTree:ENSGT00550000074757
EMBL:AADN02030345 IPI:IPI00590871 Ensembl:ENSGALT00000010998
ArrayExpress:E1C866 Uniprot:E1C866
Length = 938
Score = 126 (49.4 bits), Expect = 0.00051, P = 0.00051
Identities = 49/206 (23%), Positives = 91/206 (44%)
Query: 503 VGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVK-DCEDSNPL 561
+G D+ + VN + ++ K++ YL++ S+ ++ I +N +K D NP
Sbjct: 68 LGHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSEL-IRLINNAIKNDLASRNPT 126
Query: 562 IRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPY--VRKTAAVCVAKLYDINAQLVEDQ 619
LA+ + + ++ E + K L D V+++AA+C+ +LY + LV
Sbjct: 127 FMGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMG 186
Query: 620 GFLDQLKDLLSDSNPMVVANA---VAALSEMN--EASTSGVALIEMNAQTINKLLTALNE 674
+ ++ LL+D + VV A + L++ N E TS + ++ + T L +
Sbjct: 187 DWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSASTDLQD 246
Query: 675 CT------EWGQVFILDSLSNYSPKD 694
T W V +L L Y P D
Sbjct: 247 YTYYFVPAPWLSVKLLRLLQCYPPPD 272
>MGI|MGI:101920 [details] [associations]
symbol:Ap2a2 "adaptor-related protein complex 2, alpha 2
subunit" species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005905 "coated pit" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=TAS] [GO:0006897 "endocytosis" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0008565 "protein transporter
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=TAS] [GO:0030117 "membrane
coat" evidence=IDA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0030141 "secretory granule" evidence=TAS]
InterPro:IPR002553 InterPro:IPR003164 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013038 InterPro:IPR015873
InterPro:IPR016024 InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296
Pfam:PF02883 PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041
MGI:MGI:101920 GO:GO:0005886 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192
GO:GO:0008565 GO:GO:0030141 GO:GO:0006897 GO:GO:0005905
GO:GO:0008289 PDB:1KY7 PDBsum:1KY7 PDB:2VJ0 PDBsum:2VJ0
eggNOG:COG5096 GO:GO:0030131 SUPFAM:SSF55711 SUPFAM:SSF49348
KO:K11824 OMA:PNKQAQM Gene3D:2.60.40.1030 Gene3D:3.30.310.30
HOVERGEN:HBG050518 GeneTree:ENSGT00550000074757 OrthoDB:EOG4HMJ8J
CTD:161 ChiTaRS:AP2A2 EMBL:X14972 EMBL:AK088500 EMBL:AC158224
EMBL:AC102524 EMBL:BC010597 EMBL:AF006990 IPI:IPI00310131
PIR:B30111 PIR:S12471 RefSeq:NP_031485.3 UniGene:Mm.253090 PDB:1B9K
PDB:1KY6 PDB:1KYD PDB:1KYF PDB:1KYU PDB:1QTP PDB:1QTS PDB:1W80
PDB:2JKR PDB:2JKT PDB:3HS8 PDBsum:1B9K PDBsum:1KY6 PDBsum:1KYD
PDBsum:1KYF PDBsum:1KYU PDBsum:1QTP PDBsum:1QTS PDBsum:1W80
PDBsum:2JKR PDBsum:2JKT PDBsum:3HS8 ProteinModelPortal:P17427
SMR:P17427 DIP:DIP-32160N IntAct:P17427 MINT:MINT-101068
STRING:P17427 PhosphoSite:P17427 PaxDb:P17427 PRIDE:P17427
Ensembl:ENSMUST00000003038 GeneID:11772 KEGG:mmu:11772
InParanoid:Q8C2J5 EvolutionaryTrace:P17427 NextBio:279555
PMAP-CutDB:P17427 Bgee:P17427 CleanEx:MM_AP2A2
Genevestigator:P17427 GermOnline:ENSMUSG00000002957 Uniprot:P17427
Length = 938
Score = 126 (49.4 bits), Expect = 0.00051, P = 0.00051
Identities = 49/206 (23%), Positives = 91/206 (44%)
Query: 503 VGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVK-DCEDSNPL 561
+G D+ + VN + ++ K++ YL++ S+ ++ I +N +K D NP
Sbjct: 68 LGHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSEL-IRLINNAIKNDLASRNPT 126
Query: 562 IRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPY--VRKTAAVCVAKLYDINAQLVEDQ 619
LA+ + + ++ E + K L D V+++AA+C+ +LY + LV
Sbjct: 127 FMGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMG 186
Query: 620 GFLDQLKDLLSDSNPMVVANA---VAALSEMN--EASTSGVALIEMNAQTINKLLTALNE 674
+ ++ LL+D + VV A + L++ N E TS + ++ + T L +
Sbjct: 187 DWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSASTDLQD 246
Query: 675 CT------EWGQVFILDSLSNYSPKD 694
T W V +L L Y P D
Sbjct: 247 YTYYFVPAPWLSVKLLRLLQCYPPPD 272
>RGD|71015 [details] [associations]
symbol:Ap2a2 "adaptor-related protein complex 2, alpha 2 subunit"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0005905 "coated pit" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0008565
"protein transporter activity" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0030117 "membrane
coat" evidence=ISO] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] InterPro:IPR002553 InterPro:IPR003164
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013038
InterPro:IPR015873 InterPro:IPR016024 InterPro:IPR017104
Pfam:PF01602 Pfam:PF02296 Pfam:PF02883 PIRSF:PIRSF037091
SMART:SM00809 InterPro:IPR013041 RGD:71015 GO:GO:0005886
Reactome:REACT_111984 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565 GO:GO:0006897
GO:GO:0005905 GO:GO:0008289 GO:GO:0030131 SUPFAM:SSF55711
SUPFAM:SSF49348 eggNOG:NOG303101 Gene3D:2.60.40.1030
Gene3D:3.30.310.30 HOVERGEN:HBG050518 OrthoDB:EOG4HMJ8J EMBL:X53773
IPI:IPI00471901 PIR:S11276 UniGene:Rn.34928 PDB:2VGL PDB:2XA7
PDBsum:2VGL PDBsum:2XA7 ProteinModelPortal:P18484 SMR:P18484
DIP:DIP-29765N IntAct:P18484 MINT:MINT-93156 STRING:P18484
PRIDE:P18484 UCSC:RGD:71015 InParanoid:P18484
EvolutionaryTrace:P18484 ArrayExpress:P18484 Genevestigator:P18484
GermOnline:ENSRNOG00000019534 Uniprot:P18484
Length = 938
Score = 126 (49.4 bits), Expect = 0.00051, P = 0.00051
Identities = 49/206 (23%), Positives = 91/206 (44%)
Query: 503 VGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVK-DCEDSNPL 561
+G D+ + VN + ++ K++ YL++ S+ ++ I +N +K D NP
Sbjct: 68 LGHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSEL-IRLINNAIKNDLASRNPT 126
Query: 562 IRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPY--VRKTAAVCVAKLYDINAQLVEDQ 619
LA+ + + ++ E + K L D V+++AA+C+ +LY + LV
Sbjct: 127 FMGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMG 186
Query: 620 GFLDQLKDLLSDSNPMVVANA---VAALSEMN--EASTSGVALIEMNAQTINKLLTALNE 674
+ ++ LL+D + VV A + L++ N E TS + ++ + T L +
Sbjct: 187 DWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSASTDLQD 246
Query: 675 CT------EWGQVFILDSLSNYSPKD 694
T W V +L L Y P D
Sbjct: 247 YTYYFVPAPWLSVKLLRLLQCYPPPD 272
>UNIPROTKB|P18484 [details] [associations]
symbol:Ap2a2 "AP-2 complex subunit alpha-2" species:10116
"Rattus norvegicus" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR002553 InterPro:IPR003164 InterPro:IPR008152
InterPro:IPR009028 InterPro:IPR013038 InterPro:IPR015873
InterPro:IPR016024 InterPro:IPR017104 Pfam:PF01602 Pfam:PF02296
Pfam:PF02883 PIRSF:PIRSF037091 SMART:SM00809 InterPro:IPR013041
RGD:71015 GO:GO:0005886 Reactome:REACT_111984 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
GO:GO:0006897 GO:GO:0005905 GO:GO:0008289 GO:GO:0030131
SUPFAM:SSF55711 SUPFAM:SSF49348 eggNOG:NOG303101
Gene3D:2.60.40.1030 Gene3D:3.30.310.30 HOVERGEN:HBG050518
OrthoDB:EOG4HMJ8J EMBL:X53773 IPI:IPI00471901 PIR:S11276
UniGene:Rn.34928 PDB:2VGL PDB:2XA7 PDBsum:2VGL PDBsum:2XA7
ProteinModelPortal:P18484 SMR:P18484 DIP:DIP-29765N IntAct:P18484
MINT:MINT-93156 STRING:P18484 PRIDE:P18484 UCSC:RGD:71015
InParanoid:P18484 EvolutionaryTrace:P18484 ArrayExpress:P18484
Genevestigator:P18484 GermOnline:ENSRNOG00000019534 Uniprot:P18484
Length = 938
Score = 126 (49.4 bits), Expect = 0.00051, P = 0.00051
Identities = 49/206 (23%), Positives = 91/206 (44%)
Query: 503 VGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVK-DCEDSNPL 561
+G D+ + VN + ++ K++ YL++ S+ ++ I +N +K D NP
Sbjct: 68 LGHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSEL-IRLINNAIKNDLASRNPT 126
Query: 562 IRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPY--VRKTAAVCVAKLYDINAQLVEDQ 619
LA+ + + ++ E + K L D V+++AA+C+ +LY + LV
Sbjct: 127 FMGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMG 186
Query: 620 GFLDQLKDLLSDSNPMVVANA---VAALSEMN--EASTSGVALIEMNAQTINKLLTALNE 674
+ ++ LL+D + VV A + L++ N E TS + ++ + T L +
Sbjct: 187 DWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSASTDLQD 246
Query: 675 CT------EWGQVFILDSLSNYSPKD 694
T W V +L L Y P D
Sbjct: 247 YTYYFVPAPWLSVKLLRLLQCYPPPD 272
>WB|WBGene00000158 [details] [associations]
symbol:apg-1 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030131 "clathrin adaptor
complex" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0008565 "protein transporter activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0009306
"protein secretion" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR002553 InterPro:IPR008152
InterPro:IPR016024 InterPro:IPR017107 Pfam:PF01602 Pfam:PF02883
PIRSF:PIRSF037094 SMART:SM00809 InterPro:IPR013041
InterPro:IPR008153 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0006886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0002119 GO:GO:0016192 GO:GO:0008565 GO:GO:0040011
GO:GO:0009306 GO:GO:0030131 SUPFAM:SSF49348 eggNOG:NOG303101
HOGENOM:HOG000210271 KO:K12391 Gene3D:2.60.40.1230
PANTHER:PTHR22780:SF5 PROSITE:PS50180 GeneTree:ENSGT00390000012618
GO:GO:0044431 OMA:DERSEVH HSSP:P17427 GO:GO:0001703 EMBL:AL132876
RefSeq:NP_740937.1 ProteinModelPortal:Q8WQB3 SMR:Q8WQB3
STRING:Q8WQB3 PaxDb:Q8WQB3 EnsemblMetazoa:Y105E8A.9 GeneID:173304
KEGG:cel:CELE_Y105E8A.9 UCSC:Y105E8A.9 CTD:173304
WormBase:Y105E8A.9 InParanoid:Q8WQB3 NextBio:879077 Uniprot:Q8WQB3
Length = 829
Score = 125 (49.1 bits), Expect = 0.00056, P = 0.00056
Identities = 65/304 (21%), Positives = 130/304 (42%)
Query: 526 KKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEP 585
K++ YL M ++ ++ N+ D S + LA+ T+G I ++ L
Sbjct: 104 KRIGYLGAMLLLDERSEVHMLVTNSLKNDLTCSTQFVSGLALCTLGSICSAEMCRDLANE 163
Query: 586 LRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALS 645
+ K +K + Y++K AA+C ++ +L+E F+ + LL + N V+ A ++
Sbjct: 164 VEKIIKQNNAYLKKKAALCAFRIVRKVPELMEV--FIPCTRSLLGEKNHGVLMGATTLVT 221
Query: 646 EMNEASTSGV----ALIEMNAQTINKLLTA----LNECT----EWGQVFILDSLSNYSPK 693
EM E S + L+ + + LL + ++ T + QV IL L
Sbjct: 222 EMCEKSPDVLNHFKKLVPNLVRILKNLLMSGYSPEHDVTGISDPFLQVKILRLLRVLGKD 281
Query: 694 DDREAQSICERITPRLAHANAAV-VLSAV--KVLMKLMEMLPGEGDFVSTLTKKLAPPLV 750
D R + + + + + A V +A+ + ++ +ME+ G + L +
Sbjct: 282 DVRVTEEMNDILAQVATNTETAKNVGNAILYETVLTIMEIKSESG--LRILAVNILGRF- 338
Query: 751 TLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDP-IYVKLEKLDIMIRLASQ 809
LL+++ ++YVAL + V ++ V DP I ++ +++ L ++
Sbjct: 339 -LLNTDKNIRYVALNTLLKTVHVDYQAVQRHRNVVVECLKDPDISIRKRAMELCFALMNR 397
Query: 810 ANIA 813
NIA
Sbjct: 398 TNIA 401
>UNIPROTKB|Q7QG73 [details] [associations]
symbol:alpha-Adaptin "AP-2 complex subunit alpha"
species:7165 "Anopheles gambiae" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0005905 "coated pit" evidence=ISS] [GO:0008565 "protein
transporter activity" evidence=ISS] [GO:0015031 "protein transport"
evidence=ISS] [GO:0048488 "synaptic vesicle endocytosis"
evidence=ISS] InterPro:IPR002553 InterPro:IPR003164
InterPro:IPR008152 InterPro:IPR009028 InterPro:IPR013038
InterPro:IPR015873 InterPro:IPR016024 InterPro:IPR017104
Pfam:PF01602 Pfam:PF02296 Pfam:PF02883 PIRSF:PIRSF037091
SMART:SM00809 InterPro:IPR013041 GO:GO:0005886 GO:GO:0006886
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008565
GO:GO:0005905 GO:GO:0048488 GO:GO:0030131 SUPFAM:SSF55711
SUPFAM:SSF49348 eggNOG:NOG303101 HSSP:P17427 HOGENOM:HOG000170596
KO:K11824 OMA:PNKQAQM Gene3D:2.60.40.1030 Gene3D:3.30.310.30
EMBL:AAAB01008839 RefSeq:XP_310153.4 ProteinModelPortal:Q7QG73
SMR:Q7QG73 STRING:Q7QG73 PRIDE:Q7QG73 EnsemblMetazoa:AGAP009538-RA
GeneID:1271372 KEGG:aga:AgaP_AGAP009538 VectorBase:AGAP009538
CTD:1271372 InParanoid:Q7QG73 OrthoDB:EOG42V6X5 PhylomeDB:Q7QG73
Uniprot:Q7QG73
Length = 934
Score = 125 (49.1 bits), Expect = 0.00065, P = 0.00065
Identities = 45/203 (22%), Positives = 92/203 (45%)
Query: 503 VGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLI 562
+G D+ + VN + ++ K++ YL++ ++ D+ + + + D + NP+
Sbjct: 67 LGHDIDFGHMEAVNLLSSNKYSEKQIGYLFISVLVNTNSDLIKLIIQSIKNDLQSRNPIH 126
Query: 563 RALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPY--VRKTAAVCVAKLYDINAQLVEDQG 620
LA++ + I + E + K L D V+++AA+C+ +L+ ++
Sbjct: 127 VNLALQCIANIGSQDMAEAFSNEIPKLLVSGDTMDVVKQSAALCLLRLFRTCPDIIPGGE 186
Query: 621 FLDQLKDLLSDSNPMVVANAVA---ALSEMNEASTSG-VAL-IEMNAQTINKLLTALNEC 675
+ ++ LL+D + VV A + AL + N G V+L + ++ + T L +
Sbjct: 187 WTSRIIHLLNDQHMGVVTAATSLIDALVKKNPEEYKGCVSLAVSRLSRIVTASYTDLQDY 246
Query: 676 T------EWGQVFILDSLSNYSP 692
T W V +L L NY+P
Sbjct: 247 TYYFVPAPWLSVKLLRLLQNYNP 269
>UNIPROTKB|I3LP89 [details] [associations]
symbol:I3LP89 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030117 "membrane coat" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR002553
InterPro:IPR016024 Pfam:PF01602 GO:GO:0006886 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0030117 GO:GO:0016192
GeneTree:ENSGT00390000012618 InterPro:IPR017109
PANTHER:PTHR22780:SF6 Ensembl:ENSSSCT00000030102 Uniprot:I3LP89
Length = 333
Score = 118 (46.6 bits), Expect = 0.00082, P = 0.00082
Identities = 63/319 (19%), Positives = 140/319 (43%)
Query: 493 LTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFV 552
+ RL+ M +G D S + + Q NL K++ YL + + + ++ ++ VNT V
Sbjct: 16 MVRLIYCEM-LGYDASFGYIHAIKLAQQGNLLEKRVGYLAVSLFLHENHELLLLLVNTVV 74
Query: 553 KDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDIN 612
KD + +N + +A+ + I ++ + + L+ +R+ A + + K + I
Sbjct: 75 KDLQSTNLVEVCMALTIVSQIFPREMIPAVLPLIEDKLQHSKEIIRRKAVLALYKFHLIA 134
Query: 613 AQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGV-----ALIEMNAQTIN- 666
V Q + + L D + V+A ++ M + ++S + + + Q +
Sbjct: 135 PNQV--QHIHIKFRKALCDRDVGVMAASLHIYLRMIKENSSAFKDLTGSFVTILKQVVGG 192
Query: 667 KLLTALNECT---EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHA--NAAVVLSAV 721
KL N + W Q+ +L L D R ++ + + + L A N V + +
Sbjct: 193 KLPVDFNYHSVPAPWLQIQLLRILGLLGKDDQRTSELMYDVLDESLRRAELNHNVTYAIL 252
Query: 722 KVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDI-LKH 780
+ + + + + + K + +LS + ++Y+ L+ + ++Q+ P + L+H
Sbjct: 253 FECVHTVYSIYPKSELLEKAAKCIGK---FVLSPKINLKYLGLKALTYVIQQDPTLALQH 309
Query: 781 EMKVF-FVKYNDPIYVKLE 798
+M + + + DPI +K E
Sbjct: 310 QMTIIECLDHPDPI-IKRE 327
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 883 847 0.00082 122 3 11 22 0.37 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 172
No. of states in DFA: 624 (66 KB)
Total size of DFA: 377 KB (2182 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 72.04u 0.13s 72.17t Elapsed: 00:00:19
Total cpu time: 72.15u 0.13s 72.28t Elapsed: 00:00:20
Start: Thu Aug 15 16:25:30 2013 End: Thu Aug 15 16:25:50 2013
WARNINGS ISSUED: 1