RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy2915
(883 letters)
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment
{Human (Homo sapiens) [TaxId: 9606]}
Length = 579
Score = 348 bits (894), Expect = e-110
Identities = 334/535 (62%), Positives = 373/535 (69%), Gaps = 109/535 (20%)
Query: 4 SKYFTTTKKGEIFELKGELNSDKKEKKREAVKKVIASMTVGKDVSALFPDVVNCMQTDNL 63
SKYFTT KKGEIFELK ELN++KKEK++EAVKKVIA+MTVGKDVS+LFPDVVNCMQTDNL
Sbjct: 1 SKYFTTNKKGEIFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDNL 60
Query: 64 ELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQKSSSSFQCMIDIRSIPLFDLCSSVGVFVK 123
ELKKLVYLYLMNYAKS PDMAIMA ++F VK
Sbjct: 61 ELKKLVYLYLMNYAKSQPDMAIMAVNSF------------------------------VK 90
Query: 124 DCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINA 183
DCED NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINA
Sbjct: 91 DCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINA 150
Query: 184 QLVEDQGFLDQLKDLLSDSNPMVVANAVAAI-----------LLLPRKSYWQRNLSSRKK 232
Q+VEDQGFLD L+DL++DSNPMVVANAVAA+ LL + L++ +
Sbjct: 151 QMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNE 210
Query: 233 QICWNLPYLMNLSVIYPAW----PLSTINPHTPLL------------KVLMKLMEMLPGE 276
W ++++ Y S TP L KVLMK +E+LP +
Sbjct: 211 CTEWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKD 270
Query: 277 GDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIY 336
D+ + L KKLAPPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYNDPIY
Sbjct: 271 SDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIY 330
Query: 337 VKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER--- 393
VKLEKLDIMIRLASQANIAQVL+ELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER
Sbjct: 331 VKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVS 390
Query: 394 ----------------CVSTLLDLIQT--------------------------------- 404
+ + D+ +
Sbjct: 391 TLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVG 450
Query: 405 KYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLS 459
+YAERIDNADELLESFLEGFHDE+TQVQL LLTAIVKLFLK+P++TQELVQQVLS
Sbjct: 451 EYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLS 505
Score = 344 bits (882), Expect = e-108
Identities = 322/436 (73%), Positives = 359/436 (82%), Gaps = 50/436 (11%)
Query: 497 VIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCE 556
VIA+MTVGKDVS+LFPDVVNCMQTDNLELKKLVYLYLMNYAKS PDMAIMAVN+FVKDCE
Sbjct: 34 VIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDCE 93
Query: 557 DSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLV 616
D NPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKL+DINAQ+V
Sbjct: 94 DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMV 153
Query: 617 EDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
EDQGFLD L+DL++DSNPMVVANAVAALSE++E+ + L+++N Q INKLLTALNECT
Sbjct: 154 EDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNS-NLLDLNPQNINKLLTALNECT 212
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGD 736
EWGQ+FILD LSNY+PKDDREAQSICER+TPRL+HAN+AVVLSAVKVLMK +E+LP + D
Sbjct: 213 EWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSD 272
Query: 737 FVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVK 796
+ + L KKLAPPLVTLLS EPEVQYVALRNINLIVQKRP+ILK E+KVFFVKYNDPIYVK
Sbjct: 273 YYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYNDPIYVK 332
Query: 797 LEKL--------------------------DIMIRLASQANIAQ---------------- 814
LEKL D+ + I +
Sbjct: 333 LEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTL 392
Query: 815 -------VNYVVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWIIGEY 867
VNYVVQEAIVVI+DIFRKYPNKYE+II+TLCENLD+LDEP+ARA+MIWI+GEY
Sbjct: 393 LDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATLCENLDSLDEPDARAAMIWIVGEY 452
Query: 868 AERIDNADELLESFLE 883
AERIDNADELLESFLE
Sbjct: 453 AERIDNADELLESFLE 468
Score = 36.3 bits (83), Expect = 0.018
Identities = 41/296 (13%), Positives = 91/296 (30%), Gaps = 51/296 (17%)
Query: 583 CEPLRKCLKDEDPYVRKTAAVCVAKL----YDINA------QLVEDQGF----------- 621
L+ L +E RK A V D+++ ++
Sbjct: 12 IFELKAELNNEKKEKRKEAVKKVIAAMTVGKDVSSLFPDVVNCMQTDNLELKKLVYLYLM 71
Query: 622 -------------LDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKL 668
++ D NP++ A AV + + + E + + K
Sbjct: 72 NYAKSQPDMAIMAVNSFVKDCEDPNPLIRALAVRTMGCIRVDK-----ITEYLCEPLRKC 126
Query: 669 LTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLM 728
L + + L + + + E Q + + +A +N VV +AV L ++
Sbjct: 127 LKDEDPYVRKTAAVCVAKLHDINAQMV-EDQGFLDSLRDLIADSNPMVVANAVAALSEIS 185
Query: 729 EMLPGEGDFVSTLTKKLAPPLVTLL-SSEPEVQYVALRNINLIVQKRPDILKHEMKVFFV 787
E P + L + L+T L Q L ++ K +
Sbjct: 186 ESHPNS--NLLDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQ-------- 235
Query: 788 KYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETIIST 843
+ + +L + + L++ + + ++ + + +K T++S
Sbjct: 236 SICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSG 291
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 584
Score = 265 bits (679), Expect = 4e-79
Identities = 67/454 (14%), Positives = 151/454 (33%), Gaps = 84/454 (18%)
Query: 493 LTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFV 552
+ +L+ + G D+ + VN + ++ K++ YL++ S+ ++ + N
Sbjct: 51 VCKLLFIFLL-GHDIDFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRLINNAIK 109
Query: 553 KDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKC--LKDEDPYVRKTAAVCVAKLYD 610
D NP LA+ + + ++ E + K D V+++AA+C+ +LY
Sbjct: 110 NDLASRNPTFMGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYR 169
Query: 611 INAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGV-ALIEMNAQTINKLL 669
+ LV + ++ LL+D + VV A + ++ + + + + + +++++
Sbjct: 170 TSPDLVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIV 229
Query: 670 TALNECT----------EWGQVFILDSLSNYSPKDDREAQ--------SICERITPRLAH 711
T+ + W V +L L Y P +D + +I +
Sbjct: 230 TSASTDLQDYTYYFVPAPWLSVKLLRLLQCYPPPEDPAVRGRLTECLETILNKAQEPPKS 289
Query: 712 ANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIV 771
+ VL + + ++ + L + L E ++Y+AL ++ +
Sbjct: 290 KKVQHSNAKNAVLFEAISLIIHHDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLA 349
Query: 772 QKRPD---ILKH-EMKVFFVKYNDPIYVKLEK---------------------------- 799
+ H E + +K + V+
Sbjct: 350 SSEFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVAEMLSYLETAD 409
Query: 800 -------------------------LDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYP 834
+D ++ L A +YV +E + I
Sbjct: 410 YSIREEIVLKVAILAEKYAVDYTWYVDTILNLIRIAG----DYVSEEVWYRVIQIVINRD 465
Query: 835 NKYETIISTLCENLDTLDEPEARAS-MIWIIGEY 867
+ T+ E L E +I+GE+
Sbjct: 466 DVQGYAAKTVFEALQAPACHENLVKVGGYILGEF 499
Score = 262 bits (670), Expect = 5e-78
Identities = 80/513 (15%), Positives = 169/513 (32%), Gaps = 108/513 (21%)
Query: 14 EIFELKGELNSDKK---EKKREAVKKVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVY 70
E+ ++ + DK K++ V K++ +G D+ + VN + ++ K++ Y
Sbjct: 28 ELANIRSKFKGDKALDGYSKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNRYTEKQIGY 87
Query: 71 LYLMNYAKSHPDMAIMAFSTFFYQKSSSSFQCMIDIRSIPLFDLCSSVGVFVKDCEDSNP 130
L++ S+ ++ + + D NP
Sbjct: 88 LFISVLVNSNSELIRLINNAI------------------------------KNDLASRNP 117
Query: 131 LIRALAVRTMGCIRVDKITEYLCEPLRKC--LKDEDPYVRKTAAVCVAKLYDINAQLVED 188
LA+ + + ++ E + K D V+++AA+C+ +LY + LV
Sbjct: 118 TFMGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPM 177
Query: 189 QGFLDQLKDLLSDSNPMVVANAVAAILLLPRKS-----YWQRNLSSRKKQI--------- 234
+ ++ LL+D + VV A + I L +K+ SR +I
Sbjct: 178 GDWTSRVVHLLNDQHLGVVTAATSLITTLAQKNPEEFKTSVSLAVSRLSRIVTSASTDLQ 237
Query: 235 ---------CWNLPYLMNLSVIYPAW-----------PLSTINPHTPLL----------- 263
W L+ L YP L TI
Sbjct: 238 DYTYYFVPAPWLSVKLLRLLQCYPPPEDPAVRGRLTECLETILNKAQEPPKSKKVQHSNA 297
Query: 264 --KVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPD--- 318
VL + + ++ + L + L E ++Y+AL ++ +
Sbjct: 298 KNAVLFEAISLIIHHDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEA 357
Query: 319 ILKH-EMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAV 377
+ H E + +K + V+ +D++ + ++N Q+++E+ Y D + V
Sbjct: 358 VKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVAEMLSYLETADYSIREEIV 417
Query: 378 RAIGRCAIKVEQSAERCVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLT 437
+ A K V T+L+LI+ V ++
Sbjct: 418 LKVAILAEKYAVDYTWYVDTILNLIRIA----------------------GDYVSEEVWY 455
Query: 438 AIVKLFLKRPTDTQELVQQVLSLATQDSDNPDL 470
++++ + R + V + + +L
Sbjct: 456 RVIQIVINRDDVQGYAAKTVFEALQAPACHENL 488
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 888
Score = 73.6 bits (179), Expect = 6e-14
Identities = 93/779 (11%), Positives = 227/779 (29%), Gaps = 83/779 (10%)
Query: 123 KDCEDSNPLIRALAVRTMG-CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDI 181
K+ + + I+ + + + YL L K LK ED R + + +
Sbjct: 18 KESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIFVLTK-LKSEDEPTRSLSGLILKNNVKA 76
Query: 182 NAQLVED---QGFLDQLKDLLSDSNPMVVANAVAAILLLPRKSYWQRNLSSRKKQICWN- 237
+ Q + + + + DS+P++ A I + K Q W
Sbjct: 77 HFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQN----------WPD 126
Query: 238 -LPYLMNLSVIYPAWPLSTINPHT--PLLKVLMKLMEMLPG--EGDFVSTLTKKLAPPLV 292
LP L +L L + + +T L K+ E + D + + P +
Sbjct: 127 LLPKLCSL--------LDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFL 178
Query: 293 TLLSSE-PEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQ 351
P+++ A+ +N + R L
Sbjct: 179 QFFKHSSPKIRSHAVACVNQFIISRTQAL------------------------------M 208
Query: 352 ANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKYAERID 411
+I L A + + + + RA+ + +++ + + ++ +
Sbjct: 209 LHIDSFTENLFALAGDEEPEVRKNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDE 268
Query: 412 NADELLESFLEGFHDENTQVQL--QLLTAIVKLFLKRPTDTQELVQQVLSLATQDSDNPD 469
N F ++ + + L ++ + + + + + +D PD
Sbjct: 269 NVALEACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGMKYSDIDIILLKGDVEEDETIPD 328
Query: 470 LRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLV 529
+ T + + + D + ++ C ++
Sbjct: 329 SEQDIRPRFHRSRTVAQQHDEDGIEEEDDDDDEIDDDDTISDWNLRKCS----AAALDVL 384
Query: 530 YLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKC 589
+ H + + + + ++ A+ + L L +C
Sbjct: 385 ANVYRDELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIPHLIQC 444
Query: 590 LKDEDPYVRKTAAVCVAKLYDINAQLVED---QGFLDQLKDLLSDSNPMVVANAVAALSE 646
L D+ VR +++ D + + +L + DSN V A +A +
Sbjct: 445 LSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAACSAFAT 504
Query: 647 MNEASTSGVALIEMNAQTINKLLTALNECTEWGQVFILDSLS--NYSPKDDREAQSICER 704
+ E + + + A ++ L+ A ++ + + D++ S +
Sbjct: 505 LEEEACTELV--PYLAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPEYIQM 562
Query: 705 ITPRLAHANAAVVLSA---VKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQY 761
+ P L + +L L + + + V L+
Sbjct: 563 LMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAM 622
Query: 762 VALRNINLIVQKRPDILKHEMKVF--FVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVV 819
+ + D + + + + +L ++ L Q ++ V
Sbjct: 623 LNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVR 682
Query: 820 QEAIVVIKDIFRKYPNKY----ETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNA 874
Q + ++ D+ + + L NL+ + + W IGE + ++
Sbjct: 683 QSSFALLGDLTKACFQHVKPCIADFMPILGTNLNP-EFISVCNNATWAIGEISIQMGIE 740
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId:
9606]}
Length = 876
Score = 67.5 bits (163), Expect = 5e-12
Identities = 85/580 (14%), Positives = 187/580 (32%), Gaps = 61/580 (10%)
Query: 351 QANIAQVLSEL-KEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKYAER 409
+ + + + + ++ E D + + AI + K E S ++ L+ + +
Sbjct: 147 KESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTK 206
Query: 410 IDNADE-----LLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQV---LSLA 461
+ E +++ E +T+V++ L +VK+ + + +++
Sbjct: 207 ANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIE 266
Query: 462 TQDSDNPDLRDRGFIYWRLLSTGNTFYILLHLTRLV--------------IASMTVGKDV 507
SD ++ +G +W + + A + +
Sbjct: 267 AMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPIL 326
Query: 508 SALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDC--------EDSN 559
+ D+ K + LM A D + V F+K+ D+
Sbjct: 327 TQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAA 386
Query: 560 PLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQ 619
+ + ++ + L + +KD VR TAA V ++ ++ + +
Sbjct: 387 VMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAIND 446
Query: 620 GFLDQLKDLL---SDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECT 676
+L L L + P V +N A S + EA+ + + + L++ E
Sbjct: 447 VYLAPLLQCLIEGLSAEPRVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSFELI 506
Query: 677 EWGQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLM-KLMEMLPGEG 735
+ D + A I A V V+M +L ++L E
Sbjct: 507 VQKLLETTDRPDGHQNNLRSSAYESLMEIVKNSAKDCYPAVQKTTLVIMERLQQVLQMES 566
Query: 736 DFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYV 795
ST + L +LL + +Q V + + + D++ + F V
Sbjct: 567 HIQSTSDRIQFNDLQSLLCAT--LQNVLRKVQHQDALQISDVVMASLLRMFQSTAGSGGV 624
Query: 796 KLEKLDIMIRLASQANIAQVNY-------------------VVQEAIVVIKDIFRKYPNK 836
+ + L + L + Y V A+ ++ D+ R +
Sbjct: 625 QEDALMAVSTLVEVLGGEFLKYMEAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSN 684
Query: 837 Y----ETIISTLCENL-DTLDEPEARASMIWIIGEYAERI 871
+ ++ L ENL + + ++ + G+ A I
Sbjct: 685 IIPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDIALAI 724
Score = 32.4 bits (72), Expect = 0.30
Identities = 88/746 (11%), Positives = 213/746 (28%), Gaps = 88/746 (11%)
Query: 126 EDSNPLIRALAVRTMGCIRVDKITEYL-------CEPLRKCLKDEDPYVRKTAA------ 172
+S ++ + +G I D E L + + ++ E+P A
Sbjct: 140 PNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALL 199
Query: 173 VCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAAILLLPRKSYWQRNLSSRKK 232
+ + E + + + + V A+ +
Sbjct: 200 NSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNL-----------------V 242
Query: 233 QICWNLPYLMNLSVIYPAWPLSTINPHTPLLKVLMKLMEMLPGEGDFVSTLTKKLAPPLV 292
+I M + + ++ + + +V ++ +E D L + +
Sbjct: 243 KIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAE 302
Query: 293 TLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQA 352
E ++ A + +V L + + +P L ++
Sbjct: 303 QGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDD 362
Query: 353 NIAQVLSELKEYATEVDVDFVRKAVRAIGRCA-----IKVEQSAERCVSTLLDLIQTKYA 407
+ VL +KE+ D + AV A G +++ + + TL++L++
Sbjct: 363 IVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSV 422
Query: 408 ERIDNADELLESFLEGFHDE--NTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQDS 465
D A + E + N LL +++ P + SLA
Sbjct: 423 VVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSAEPRVASNVCWAFSSLAEAAY 482
Query: 466 DNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDV-SALFPDVVNCMQTDNLE 524
+ D+ D + + I+ L ++ S+ + ++ ++ +
Sbjct: 483 EAADVADDQEEPATYCLSSSFELIVQKLLETTDRPDGHQNNLRSSAYESLMEIVKNSAKD 542
Query: 525 LKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCI-------RVDK 577
V + + + M + +++L T+ + +
Sbjct: 543 CYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQHQDALQ 602
Query: 578 ITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLL-----SDS 632
I++ + L + + +A + E +++ K L + +
Sbjct: 603 ISDVVMASLLRMFQSTAGSGGVQEDALMAVSTLVEVLGGEFLKYMEAFKPFLGIGLKNYA 662
Query: 633 NPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTEWGQV--FILDSLSNY 690
V AV + ++ +I + + LL L V IL +
Sbjct: 663 EYQVCLAAVGLVGDL--CRALQSNIIPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDI 720
Query: 691 SPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLV 750
+ E + E + L A+ A V + ++ D+++ L +
Sbjct: 721 ALAIGGEFKKYLEVVLNTLQQASQAQVDKSDYDMV----------DYLNELRESCLEAYT 770
Query: 751 TLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQA 810
++ Q ++ L+ + IL +
Sbjct: 771 GIVQGLKGDQENVHPDVMLVQPRVEFILSFIDHIA------------------------G 806
Query: 811 NIAQVNYVVQEAIVVIKDIFRKYPNK 836
+ + VV A +I D+ +
Sbjct: 807 DEDHTDGVVACAAGLIGDLCTAFGKD 832
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein
phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId:
9606]}
Length = 588
Score = 65.2 bits (157), Expect = 2e-11
Identities = 71/542 (13%), Positives = 153/542 (28%), Gaps = 33/542 (6%)
Query: 125 CEDSNPLIRALA---VRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDI 181
D + ++ ALA + + L PL E+ VR A + +
Sbjct: 58 IYDEDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHE 117
Query: 182 NAQLVEDQGFLDQLKDLLSDSNPMVVANAVAAILLLPRK--SYWQRNLSSRKKQIC-WNL 238
++ + F+ +K L +A + + S + L + +C +
Sbjct: 118 HSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCSDDT 177
Query: 239 PYLMNLSVIYPAWPLSTINPHTPLLKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSE 298
P + + + +++ + E D V L + + LL E
Sbjct: 178 PMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQE 237
Query: 299 PEVQYVALRNINLIVQKRPDILK---------HEMKVFFVKYNDPIYVKLEKLDIMIRLA 349
V K + + + D + +
Sbjct: 238 DLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEV 297
Query: 350 SQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKYAER 409
A +V + + + + + + + + + + + + +
Sbjct: 298 RAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGK 357
Query: 410 IDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQDSDNPD 469
+ + LL FL DE +V+L +++ + + + +
Sbjct: 358 DNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWR 417
Query: 470 LRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLV 529
+R Y LL+ L ++ L V + LKKLV
Sbjct: 418 VRLAIIEYMPLLAG--------QLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLV 469
Query: 530 YLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRALAVRTMG----CIRVDKITEYLCEP 585
+ +A + + + D N L R + + D T+++
Sbjct: 470 EKFGKEWAHAT------IIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPT 523
Query: 586 LRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALS 645
+ + D VR A + K+ I L+ L D + V A AL+
Sbjct: 524 VLRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPILEKLTQDQDVDVKYFAQEALT 583
Query: 646 EM 647
+
Sbjct: 584 VL 585
Score = 48.2 bits (113), Expect = 4e-06
Identities = 19/101 (18%), Positives = 33/101 (32%), Gaps = 4/101 (3%)
Query: 121 FVKDCEDSNPLIRALAVRTMG----CIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 176
+ D N L R + + D T+++ + + D VR A +
Sbjct: 485 VLAMSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQ 544
Query: 177 KLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAAILLL 217
K+ I L+ L D + V A A+ +L
Sbjct: 545 KIGPILDNSTLQSEVKPILEKLTQDQDVDVKYFAQEALTVL 585
Score = 47.9 bits (112), Expect = 5e-06
Identities = 68/539 (12%), Positives = 146/539 (27%), Gaps = 44/539 (8%)
Query: 151 YLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNP--MVVA 208
Y L L++ED +R + ++ + L L D + D + + +A
Sbjct: 10 YPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALA 69
Query: 209 NAVAAILLLPRKSYWQRNLSS-------------RKK------QICWNLPYLMNLSVIYP 249
+ L + L R K I + P
Sbjct: 70 EQLGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHEHSPSDLEAHFVP 129
Query: 250 AWPLSTINPHTPLLKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSS-EPEVQYVALRN 308
L + S + +L L S P V+ A
Sbjct: 130 LVKRLAGGDWFTSRTSACGLFSVCYPR--VSSAVKAELRQYFRNLCSDDTPMVRRAAASK 187
Query: 309 I-----NLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDI--MIRLASQANIAQVLSEL 361
+ L + + D + + + + L + A V+ L
Sbjct: 188 LGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTL 247
Query: 362 KEYATEVDVDFVRKAVRAIGRC--AIKVEQSAERCVSTLLDLIQTKYAERIDNADELLES 419
++ A + A+ E + V +L++ AE A ++
Sbjct: 248 RQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKE 307
Query: 420 FLEGFHDEN--TQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQDSDNPDLRDRGFIY 477
F E + + Q+L I +L + + V+ + + +
Sbjct: 308 FCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPL 367
Query: 478 WRLLSTGNTFYILLH---LTRLVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLM 534
+ + L+ V + + + +L P +V + ++ + Y+
Sbjct: 368 FLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMP 427
Query: 535 NYAK--SHPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCI----RVDKITEYLCEPLRK 588
A + + D IR A + + + + +
Sbjct: 428 LLAGQLGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEWAHATIIPKVLA 487
Query: 589 CLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEM 647
D + R T C+ L ++ Q + + L + + D V N +L ++
Sbjct: 488 MSGDPNYLHRMTTLFCINVLSEVCGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKI 546
Score = 35.9 bits (81), Expect = 0.022
Identities = 18/104 (17%), Positives = 33/104 (31%), Gaps = 3/104 (2%)
Query: 555 CEDSNPLIRALA---VRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDI 611
D + ++ ALA + + L PL E+ VR A + +
Sbjct: 58 IYDEDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATVEETVVRDKAVESLRAISHE 117
Query: 612 NAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGV 655
++ + F+ +K L +A S +S V
Sbjct: 118 HSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSSAV 161
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId:
9606]}
Length = 529
Score = 59.5 bits (142), Expect = 1e-09
Identities = 70/509 (13%), Positives = 143/509 (28%), Gaps = 15/509 (2%)
Query: 154 EPLRKCLKDEDPYVRKTAAVCVAKL---YDINAQLVEDQGFLDQLKDLLSDSNPMVVANA 210
L K L DED V AAV V +L ++ + + + ++N + A
Sbjct: 20 PELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARC 79
Query: 211 VAAILLLPRKSYWQRNLSSRKKQICWNLPYLMNLS---VIYPAWPLSTINPHTPLLKVLM 267
A L + I + L + + Y L + H K+ +
Sbjct: 80 TAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAV 139
Query: 268 KLMEMLPGEGDFVSTLTKKLAPPLVTLLSS--EPEVQYVALRNINLIVQKRPDILKHEMK 325
+L L ++ K L + + + Q +I++
Sbjct: 140 RLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTY 199
Query: 326 VFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAI 385
+ + L +A Q L ++ V +R + A
Sbjct: 200 EKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAAT 259
Query: 386 KVEQSAERCVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLK 445
K E + + L A L + ++ Q+ + A+V+ L+
Sbjct: 260 KQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLR 319
Query: 446 RPTDTQELVQQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGK 505
+ +L S + + +L + + TVG
Sbjct: 320 AGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGL 379
Query: 506 DVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRAL 565
+ + + + +LV L + + + ++ + ++
Sbjct: 380 IRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGC 439
Query: 566 AVRTMGCIRVDKITEYLCE-----PLRKCLKDEDPYVRKTAAVCVAKL--YDINAQLVED 618
R + + L +++ AA + +L A+ +E
Sbjct: 440 TGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEA 499
Query: 619 QGFLDQLKDLLSDSNPMVVANAVAALSEM 647
+G L +LL N V A A L M
Sbjct: 500 EGATAPLTELLHSRNEGVATYAAAVLFRM 528
Score = 46.8 bits (109), Expect = 9e-06
Identities = 25/156 (16%), Positives = 48/156 (30%), Gaps = 11/156 (7%)
Query: 584 EPLRKCLKDEDPYVRKTAAVCVAKL---YDINAQLVEDQGFLDQLKDLLSDSNPMVVA-N 639
L K L DED V AAV V +L ++ + + + ++N + A
Sbjct: 20 PELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARC 79
Query: 640 AVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTEWGQVFILDSLS-----NYSPKD 694
L ++ +A+ + I L+ L + + + +L K
Sbjct: 80 TAGTLHNLSHHREGLLAIFKSGG--IPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKM 137
Query: 695 DREAQSICERITPRLAHANAAVVLSAVKVLMKLMEM 730
+++ L N + L L
Sbjct: 138 AVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYG 173
Score = 36.0 bits (81), Expect = 0.023
Identities = 23/147 (15%), Positives = 49/147 (33%), Gaps = 1/147 (0%)
Query: 543 MAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAA 602
+A+ N + + P + L VR + + + ++ E+ T A
Sbjct: 383 LALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGA 442
Query: 603 VCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNA 662
+ + N ++ + LL + A L E+ + + A+ A
Sbjct: 443 LHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGA 502
Query: 663 -QTINKLLTALNECTEWGQVFILDSLS 688
+ +LL + NE +L +S
Sbjct: 503 TAPLTELLHSRNEGVATYAAAVLFRMS 529
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1
(Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Length = 1207
Score = 59.4 bits (142), Expect = 2e-09
Identities = 79/833 (9%), Positives = 220/833 (26%), Gaps = 73/833 (8%)
Query: 15 IFELKGELNSDKKEKKREAVKKVIASM------TVGKDVSALFPDVVNCMQTDNLELKKL 68
I L EL+ + + IA++ +G+ + + P VV D+ EL++
Sbjct: 212 IEHLLSELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREY 271
Query: 69 VYLYLMNYAKSHP-----------DMAIMAFSTFFYQKSSSSFQCMIDIRSIPLFDLCSS 117
++ + P ++ + + + + + D
Sbjct: 272 CIQAFESFVRRCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDEDENAMDADGGDDDDQG 331
Query: 118 VGVFVKDCEDSNPLIRALAVRTMG------CIRVDKITEYLCEPLRKCLKDEDPYVRKTA 171
D +D + +R A + + + + + + L K+ + V+
Sbjct: 332 SDDEYSDDDDMSWKVRRAAAKCLDAVVSTRHEMLPEFYKTVSPALISRFKEREENVKADV 391
Query: 172 AVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPM-----VVANAVAAILLLPRKSYWQRN 226
L + D ++ + + + A+ + Q
Sbjct: 392 FHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQSQVPNIVKALHKQMKEKSVKTRQCC 451
Query: 227 LSSRKKQICWNLPYLMNLSVIYPAWPLSTINPHTPLLKVLMKLMEMLP------GEGDFV 280
+ + + L + + ++N + + + + L F
Sbjct: 452 FNMLTELVNVLPGALTQHIPVLVPGIIFSLNDKSSSSNLKIDALSCLYVILCNHSPQVFH 511
Query: 281 STLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLE 340
+ + P + + ++ AL +V+ + + D ++
Sbjct: 512 PHVQALVPPVVACVGDPFYKITSEALLVTQQLVKVIRPLDQPSSFDATPYIKDLFTCTIK 571
Query: 341 KLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLD 400
+L A ++ I +K E + V L
Sbjct: 572 RLKAADIDQEVKERAISCMGQIICNLGDNLGSDLPNTLQIFLERLKNEITRLTTVKALTL 631
Query: 401 LIQTKYAERI-DNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTDTQELVQQV-- 457
+ + + E + ++L L+A+ L +
Sbjct: 632 IAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDAVL 691
Query: 458 -LSLATQDSDNPDLRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVN 516
+ + + L+ + ++ + + + P +
Sbjct: 692 DELPPLISESDMHVSQMAISFLTTLAKVYPSSLSKISGSILNELIGLVRS-----PLLQG 746
Query: 517 CMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRV- 575
+ L+ + + + N + ++ + + ++ + + +
Sbjct: 747 GALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRA 806
Query: 576 --DKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSN 633
+ + + ++ + A+ + L + + S +
Sbjct: 807 CPKEGPAVVGQFIQDVKNSRSTDSIRLLALLSLGEVGHHIDLSGQLELKSVILEAFSSPS 866
Query: 634 PMVVANAVAALSEM-----NEASTSGVALIEMNAQTINKLLTALNECTEWGQVF------ 682
V + A AL + E + I + LL +L E V
Sbjct: 867 EEVKSAASYALGSISVGNLPEYLPFVLQEITSQPKRQYLLLHSLKEIISSASVVGLKPYV 926
Query: 683 --ILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMK-------------L 727
I L + + +++ +L + +L +K + +
Sbjct: 927 ENIWALLLKHCECAEEGTRNVVAECLGKLTLIDPETLLPRLKGYLISGSSYARSSVVTAV 986
Query: 728 MEMLPGEGDFVSTLTKKLAPPLVTLLS-SEPEVQYVALRNINLIVQKRPDILK 779
+ + L K + L + V+ VAL N +P +++
Sbjct: 987 KFTISDHPQPIDPLLKNCIGDFLKTLEDPDLNVRRVALVTFNSAAHNKPSLIR 1039
Score = 54.4 bits (129), Expect = 6e-08
Identities = 47/467 (10%), Positives = 141/467 (30%), Gaps = 29/467 (6%)
Query: 411 DNADELLESFLEGFHDENTQVQLQLLTAIVKLFLK-RPTDTQELVQQVLSLATQDSDNPD 469
D+ ++++ L+ D+N +VQ + + L K + + +V + + SD
Sbjct: 41 DSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEYQVETIVDTLCTNML--SDKEQ 98
Query: 470 LRDRGFIYWRLLSTGNTFYILLHLTRLVIASMTVGKDVSALFPDVVNCMQ-TDNLELKKL 528
LRD I L T ++ L S + + + + +++ ++
Sbjct: 99 LRDISSI---GLKT-----VIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLE 150
Query: 529 VYLYLMNYAKSHPDMAIM----AVNTFVKDCEDSNPLIRALAVRTMGCI----RVDKITE 580
+ + + + + + +R + +G + +
Sbjct: 151 ALDIMADMLSRQGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFVD 210
Query: 581 YLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQ--GFLDQLKDLLSDSNPMVVA 638
+ L + K++ +T C+A + + + + + + + +
Sbjct: 211 LIEHLLSELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVDDDELRE 270
Query: 639 NAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTEWGQVFILDSLSNYSPKDDREA 698
+ A + + IN L L + + + +
Sbjct: 271 YCIQAFESF--VRRCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDEDENAMDADGGDDD 328
Query: 699 QSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLS-SEP 757
+ + V +A K L ++ + + K ++P L++ E
Sbjct: 329 DQGSDDEYSDDDDMSWKVRRAAAKCLDA---VVSTRHEMLPEFYKTVSPALISRFKEREE 385
Query: 758 EVQYVALRNINLIVQKRPDILKHEMKV-FFVKYNDPIYVKLEKLDIMIRLASQANIAQVN 816
V+ ++++ + + P+ + ++ +++ + +
Sbjct: 386 NVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQSQVPNIVKALHKQMKEKSV 445
Query: 817 YVVQEAIVVIKDIFRKYPNKYETIISTLCENLDTLDEPEARASMIWI 863
Q ++ ++ P I L + ++ +S + I
Sbjct: 446 KTRQCCFNMLTELVNVLPGALTQHIPVLVPGIIFSLNDKSSSSNLKI 492
Score = 48.6 bits (114), Expect = 3e-06
Identities = 69/569 (12%), Positives = 164/569 (28%), Gaps = 49/569 (8%)
Query: 73 LMNYAKSHPDMAIMAFSTFFYQKSSSSFQCMIDIRSIPLFDLCSSVGVFVKDCEDSNPLI 132
+ ++ + FY+ +S + + + S +D
Sbjct: 510 FHPHVQALVPPVVACVGDPFYKITSEALLVTQQLVKVIRPLDQPSSFDATPYIKDLFTCT 569
Query: 133 RALAVRTMGCIRVD-KITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGF 191
V + + + + + + T + + +L + +L +
Sbjct: 570 IKRLKAADIDQEVKERAISCMGQIICNLGDNLGSDLPNTLQIFLERLKNEITRLTTVKAL 629
Query: 192 LDQLKDLLSDSNPMVVANAVAAILLLPRKSYWQRNLSSRK--KQICWNLPYLMNLSVIYP 249
L V+ V + RK+ L + + N + ++I
Sbjct: 630 TLIAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDA 689
Query: 250 AW----PLSTINPHTPLLKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVA 305
PL + + + L + +S ++ + L+ L+ S
Sbjct: 690 VLDELPPLISESDMHVSQMAISFLTTLAKVYPSSLSKISGSILNELIGLVRSPLLQGGAL 749
Query: 306 LRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLSELKEYA 365
++ + + + + + S +IA+ ++ L
Sbjct: 750 SAMLDFF--QALVVTGTNNLGYMDLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRAC 807
Query: 366 TEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKYAERIDNADELLESFLEGFH 425
+ V + ++ + + + LL L + + + EL LE F
Sbjct: 808 PKEGPAVVGQFIQDV----KNSRSTDSIRLLALLSLGEVGHHIDLSGQLELKSVILEAFS 863
Query: 426 DENTQVQLQLLTAIVKLFLKRPTDTQELVQQVLSLATQDSDNPDLRDRGFIYWRLLSTGN 485
+ +V+ A+ + + E + VL T
Sbjct: 864 SPSEEVKSAASYALGSISVGNL---PEYLPFVLQEITSQPK------------------- 901
Query: 486 TFYILLHLTRLVIASMTVGKD---VSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPD 542
Y+LLH + +I+S +V V ++ ++ + + +V L P+
Sbjct: 902 RQYLLLHSLKEIISSASVVGLKPYVENIWALLLKHCECAEEGTRNVVAECLGKLTLIDPE 961
Query: 543 MAIMAVNTFVKDCEDSNPLIRALAVRTMGCI------RVDKITEYLCEPLRKCLKDEDPY 596
+ + ++ + R+ V + +D + + K L+D D
Sbjct: 962 TLLPRLKGYLIS---GSSYARSSVVTAVKFTISDHPQPIDPLLKNCIGDFLKTLEDPDLN 1018
Query: 597 VRKTAAVCVAKLYDINAQLVEDQGFLDQL 625
VR+ A V L+ D LD +
Sbjct: 1019 VRRVALVTFNSAAHNKPSLIRD--LLDTV 1045
Score = 46.7 bits (109), Expect = 1e-05
Identities = 85/829 (10%), Positives = 243/829 (29%), Gaps = 78/829 (9%)
Query: 118 VGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEY----LCEPLRKCLKDEDPYVRKTAAV 173
V + +K ED N ++ LAV+ +G + V K+ EY + + L + + +R +++
Sbjct: 47 VKMILKLLEDKNGEVQNLAVKCLGPL-VSKVKEYQVETIVDTLCTNMLSDKEQLRDISSI 105
Query: 174 CVAKLYDINAQLVEDQGFLDQL---------KDLLSDSNPMVVANAVAAILLLPRKSYWQ 224
+ + + + + V A+ + + +
Sbjct: 106 GLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSR--QG 163
Query: 225 RNLSSRKKQICWNLPYLMN-------------LSVIYPAWPLSTINPHTP-LLKVLMK-- 268
L + I L + L + + LL L K
Sbjct: 164 GLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFVDLIEHLLSELSKND 223
Query: 269 -----------LMEMLPGEGDFVSTLTKKLAPPLVTLLSSE-PEVQYVALRNINLIVQKR 316
+ + G + +K+ P +V + + E++ ++ V++
Sbjct: 224 SMSTTRTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQAFESFVRRC 283
Query: 317 PDILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKA 376
P + I K + + + + + + D
Sbjct: 284 PK--------EVYPHVSTIINICLKYLTYDPNYNYDDEDEDENAMDADGGDDDDQGSDDE 335
Query: 377 VRAIGRCAIKVEQSAERCVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLL 436
+ KV ++ L ++ T++ + + + + F + V+ +
Sbjct: 336 YSDDDDMSWKVRRA---AAKCLDAVVSTRHEMLPEFYKTVSPALISRFKEREENVKADVF 392
Query: 437 TAIVKLFLKRPTDTQELVQQVLSLATQDSDNPDLRDRGF----IYWRLLSTGNTFYILLH 492
A + L LK+ Q + ++ ++ L+ + + + +
Sbjct: 393 HAYLSL-LKQTRPVQSWLCDPDAMEQGETPLTMLQSQVPNIVKALHKQMKEKSVKTRQCC 451
Query: 493 LTRLVIASMTVGKDVSALFPDVVNCM------QTDNLELKKLVYLYLMNYAKSHPDMAIM 546
L + ++ P +V + ++ + LK L +H
Sbjct: 452 FNMLTELVNVLPGALTQHIPVLVPGIIFSLNDKSSSSNLKIDALSCLYVILCNHSPQVFH 511
Query: 547 AVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVA 606
+ + + + + ++ + + + D PY++ +
Sbjct: 512 PHVQALVPPVVACVGDPFYKITSEALLVTQQLVKVIRPLDQPSSFDATPYIKDLFTCTIK 571
Query: 607 KLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTIN 666
+L + + + + ++ + + ++ L E + + +
Sbjct: 572 RLKAADIDQEVKERAISCMGQIICNLGDNLGSDLPNTLQIFLERLKNEITRLTTVKALTL 631
Query: 667 KLLTALNECTEWGQVFILDSLSNYSPKDDRE-AQSICERITPRLAHANAAVVLSAVKVLM 725
+ L + L+++ K+ R + + + + ++ + + ++
Sbjct: 632 IAGSPLKIDLRPVLGEGVPILASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDAVL 691
Query: 726 KLMEMLPGEGDFVSTLTK--------KLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDI 777
+ L E D + K+ P ++ +S + + L L+
Sbjct: 692 DELPPLISESDMHVSQMAISFLTTLAKVYPSSLSKISGSILNELIGLVRSPLLQGGALSA 751
Query: 778 LKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKY 837
+ + V + + + + SQ+ + + R P +
Sbjct: 752 MLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRACPKEG 811
Query: 838 ETIISTLCENLDTLDEPEARASM-IWIIGEYAERIDNAD--ELLESFLE 883
++ +++ ++ + + +GE ID + EL LE
Sbjct: 812 PAVVGQFIQDVKNSRSTDSIRLLALLSLGEVGHHIDLSGQLELKSVILE 860
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 861
Score = 57.1 bits (136), Expect = 8e-09
Identities = 74/750 (9%), Positives = 185/750 (24%), Gaps = 52/750 (6%)
Query: 150 EYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVAN 209
+ L +P + AA +A + DI + + D P V
Sbjct: 94 NQIKTNALTALVSIEPRIANAAAQLIAAIADIELPHGAWPELMKIMVDNTGAEQPENVKR 153
Query: 210 AVAAILLLPRKSYWQRNLSSRKKQICWNLPYLMNLSVIYPAWPLSTINPHTPLLKVLMKL 269
A L Y + + + + + ++ V ++ L L
Sbjct: 154 ASLLAL-----GYMCESADPQSQALVSSSNNILIAIVQGAQSTETSKAVRLAALNALADS 208
Query: 270 MEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFF- 328
+ + + + + + EVQ A + I+ K +K M+
Sbjct: 209 LIFIKNNMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQALY 268
Query: 329 -----VKYNDPIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRC 383
+ V ++ + + + +F +++ +
Sbjct: 269 ALTIATMKSPNDKVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSIKDV--- 325
Query: 384 AIKVEQSAERCVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLF 443
V D + + L + V + I
Sbjct: 326 ---VPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHILEPVLEFVEQNITADN 382
Query: 444 LKRPTDTQELVQQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTFY---ILLHLTRLVIAS 500
+ ++ + + L++ + + R+ +
Sbjct: 383 WRNREAAVMAFGSIMDGPDKVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADSV 442
Query: 501 MTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNP 560
L V C+ K + +
Sbjct: 443 AESIDPQQHLPGVVQACLIGLQDHPKVATNCSWTIINLVEQLAEATPSPIYNFYPALVDG 502
Query: 561 LIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQG 620
LI A L + + + KL +
Sbjct: 503 LIGAANRIDNEFNARASAFSALTTMVEYATDTVAETSASISTFVMDKLGQTMSVDENQLT 562
Query: 621 FLD--QLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTEW 678
D L++L S+ ++ A + S + + + L + + +
Sbjct: 563 LEDAQSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEKKDS-----AFIEDD 617
Query: 679 GQVFILDSLSNYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFV 738
I ++ ++ ++ + L ++ V ++AV + + L +
Sbjct: 618 VFYAISALAASLGKGFEKYLETFSPYLLKALNQVDSPVSITAVGFIADISNSL---EEDF 674
Query: 739 STLTKKLAPPLVTLLSSE---PEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYV 795
+ + L ++S+ E++ L I + F+ Y + I
Sbjct: 675 RRYSDAMMNVLAQMISNPNARRELKPAVLSVFGDIASN--------IGADFIPYLNDIMA 726
Query: 796 KLEK-LDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETI----------ISTL 844
+ + + V++ + I +K E + I+ +
Sbjct: 727 LCVAAQNTKPENGTLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTIFQFIAQV 786
Query: 845 CENLDTLDEPEARASMIWIIGEYAERIDNA 874
E+ E + + +IG+ A +
Sbjct: 787 AEDPQLYSEDATSRAAVGLIGDIAAMFPDG 816
Score = 31.0 bits (68), Expect = 0.88
Identities = 79/743 (10%), Positives = 207/743 (27%), Gaps = 58/743 (7%)
Query: 152 LCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAV 211
+ L + D +R T+ + KL + N F +L D N + +
Sbjct: 6 FAQLLENSILSPDQNIRLTSETQLKKLSNDN-----FLQFAGLSSQVLIDENTKLEGRIL 60
Query: 212 AAILLLPRKSYWQRNLSSRKKQICWNLPYLMNLSVIYPAWPLSTINPHTPLLKVLMKLME 271
AA+ L + + Q + I + ++ + +L+
Sbjct: 61 AALTLKNELVSKDSVKTQQFAQRWITQVSPEAKNQIKTNALTALVSIEPRIANAAAQLIA 120
Query: 272 MLPGEGDFVSTLTKKLAPPLVTLLSSE--PEVQYVALRNINLIVQKRPDILKHEMKVFFV 329
+ + + +L +V +E V+ +L + + + + +
Sbjct: 121 AI-ADIELPHGAWPELMKIMVDNTGAEQPENVKRASLLALGYMCESADPQSQALVSSSN- 178
Query: 330 KYNDPIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQ 389
+I+I + A + ++ A D + + R +
Sbjct: 179 -------------NILIAIVQGAQSTETSKAVRLAALNALADSLIFIKNNMEREGER--- 222
Query: 390 SAERCVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKRPTD 449
+ + + Q + E A L + ++ Q L A+ +K P D
Sbjct: 223 --NYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQALYALTIATMKSPND 280
Query: 450 TQELVQQVLSLATQDSDNPDLRDRGFIYWRLLSTGNTFYILLHLTRLV-IASMTVGKDVS 508
++ + + + + + + L + +V + +
Sbjct: 281 --KVASMTVEFWSTICEEEIDIAYELAQFPQSPLQSYNFALSSIKDVVPNLLNLLTRQNE 338
Query: 509 ALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKDCEDSNPLIRALAVR 568
D N + L+ + + + + ++ + +
Sbjct: 339 DPEDDDWNVSMSAGACLQLFAQNCGNHILEPVLEFVEQNITADNWRNREAAVMAFGSIMD 398
Query: 569 TMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDL 628
++ + + D+ V++T A C+ ++ D A+ ++ Q L +
Sbjct: 399 GPDKVQRTYYVHQALPSILNLMNDQSLQVKETTAWCIGRIADSVAESIDPQQHLPGVVQA 458
Query: 629 LSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQTINKLLTALNECTEWGQVFILDSLS 688
A + + + +
Sbjct: 459 CLIGLQDHPKVATNCSWTI--------INLVEQLAEATPSPIYNFYPALVDGLIGAANRI 510
Query: 689 NYSPKDDREAQSICERITPRLAHANAAVVLSAVKVLM-KLMEMLPGEGDFVSTLTKKLAP 747
+ A S + A S +M KL + + + + ++ +
Sbjct: 511 DNEFNARASAFSALTTMVEYATDTVAETSASISTFVMDKLGQTMSVDENQLTLEDAQSLQ 570
Query: 748 PLVTLLSS-------------EPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIY 794
L + + + EP + L+ +K ++ ++ +
Sbjct: 571 ELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLG 630
Query: 795 VKLEKLDIMIRLASQANIAQVNYVV-QEAIVVIKDIFRKYPNKY----ETIISTLCENL- 848
EK + QV+ V A+ I DI + + +++ L + +
Sbjct: 631 KGFEKYLETFSPYLLKALNQVDSPVSITAVGFIADISNSLEEDFRRYSDAMMNVLAQMIS 690
Query: 849 DTLDEPEARASMIWIIGEYAERI 871
+ E + +++ + G+ A I
Sbjct: 691 NPNARRELKPAVLSVFGDIASNI 713
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 111
Score = 45.7 bits (107), Expect = 1e-06
Identities = 18/112 (16%), Positives = 28/112 (25%), Gaps = 28/112 (25%)
Query: 556 EDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAA---------VCVA 606
D N +R + + + EPL + L +ED +R AA V
Sbjct: 2 ADENKWVRRDVSTALSRMGDEAF-----EPLLESLSNEDWRIRGAAAWIIGNFQDERAVE 56
Query: 607 KLYDINAQLVEDQGF--------------LDQLKDLLSDSNPMVVANAVAAL 644
L + ++ L AV L
Sbjct: 57 PLIKLLEDDSGFVRSGAARSLEQIGGERVRAAMEKLAETGTGFARKVAVNYL 108
Score = 44.1 bits (103), Expect = 5e-06
Identities = 17/112 (15%), Positives = 28/112 (25%), Gaps = 28/112 (25%)
Query: 126 EDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAA---------VCVA 176
D N +R + + + EPL + L +ED +R AA V
Sbjct: 2 ADENKWVRRDVSTALSRMGDEAF-----EPLLESLSNEDWRIRGAAAWIIGNFQDERAVE 56
Query: 177 KLYDINAQLVEDQGF--------------LDQLKDLLSDSNPMVVANAVAAI 214
L + ++ L AV +
Sbjct: 57 PLIKLLEDDSGFVRSGAARSLEQIGGERVRAAMEKLAETGTGFARKVAVNYL 108
Score = 35.3 bits (80), Expect = 0.006
Identities = 18/135 (13%), Positives = 43/135 (31%), Gaps = 27/135 (20%)
Query: 590 LKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNE 649
+ DE+ +VR+ + ++++ D + L + LS+ + + A +
Sbjct: 1 MADENKWVRRDVSTALSRMGDEA---------FEPLLESLSNEDWRIRGAAAWIIGNF-- 49
Query: 650 ASTSGVALIEMNAQTINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICERITPRL 709
+ + + L+ L + + + + SL + R A +
Sbjct: 50 ----------QDERAVEPLIKLLEDDSGFVRSGAARSLEQIGGERVRAA------MEKLA 93
Query: 710 AHANAAVVLSAVKVL 724
AV L
Sbjct: 94 ETGTGFARKVAVNYL 108
Score = 33.4 bits (75), Expect = 0.025
Identities = 16/112 (14%), Positives = 33/112 (29%), Gaps = 18/112 (16%)
Query: 160 LKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAAILLLPR 219
+ DE+ +VR+ + ++++ D + L + LS+ + + A
Sbjct: 1 MADENKWVRRDVSTALSRMGDEA---------FEPLLESLSNEDWRIRGAAA-------- 43
Query: 220 KSYWQRNLSSRKKQICWNLPYLMNLSVIYPAWPLSTINPHTPLLKVLMKLME 271
+ + L A L I + KL E
Sbjct: 44 WIIGNFQDERAVEPLIKLLEDDSGFVRSGAARSLEQIGGERV-RAAMEKLAE 94
Score = 32.6 bits (73), Expect = 0.044
Identities = 15/78 (19%), Positives = 27/78 (34%), Gaps = 4/78 (5%)
Query: 95 KSSSSFQCMIDIRSIPLFDLCSSVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCE 154
+ I F +V +K ED + +R+ A R++ I E +
Sbjct: 32 SNEDWRIRGAAAWIIGNFQDERAVEPLIKLLEDDSGFVRSGAARSLEQIG----GERVRA 87
Query: 155 PLRKCLKDEDPYVRKTAA 172
+ K + + RK A
Sbjct: 88 AMEKLAETGTGFARKVAV 105
Score = 31.4 bits (70), Expect = 0.15
Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 4/63 (6%)
Query: 540 HPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRK 599
AV +K ED + +R+ A R++ I E + + K + + RK
Sbjct: 47 GNFQDERAVEPLIKLLEDDSGFVRSGAARSLEQIG----GERVRAAMEKLAETGTGFARK 102
Query: 600 TAA 602
A
Sbjct: 103 VAV 105
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli
[TaxId: 562]}
Length = 276
Score = 47.9 bits (112), Expect = 2e-06
Identities = 16/118 (13%), Positives = 39/118 (33%), Gaps = 6/118 (5%)
Query: 546 MAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCV 605
+ + + +D N L R + R + + D++ R A +
Sbjct: 19 LNDDELFRLLDDHNSLKRISSARVLQLRGGQDAV----RLAIEFCSDKNYIRRDIGAFIL 74
Query: 606 AKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAALSEMNEASTSGVALIEMNAQ 663
++ L+ + L+D + V A A+ + ++ + + I +Q
Sbjct: 75 GQIKICKKCEDNVFNILNNM--ALNDKSACVRATAIESTAQRCKKNPIYSPKIVEQSQ 130
Score = 47.2 bits (110), Expect = 4e-06
Identities = 32/283 (11%), Positives = 76/283 (26%), Gaps = 20/283 (7%)
Query: 106 IRSIPLFDLCSSVGV--FVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDE 163
+ L++ C + + +D N L R + R + + D+
Sbjct: 7 SKEYGLYNQCKKLNDDELFRLLDDHNSLKRISSARVLQLRGGQDAVR----LAIEFCSDK 62
Query: 164 DPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAAILLLPRKSYW 223
+ R A + ++ L+ + L+D + V A A+ + +
Sbjct: 63 NYIRRDIGAFILGQIKICKKCEDNVFNILNNM--ALNDKSACVRATAIEST------AQR 114
Query: 224 QRNLSSRKKQICWNLPYLMNLSVIYPAWPLSTINPHTPLLKVLMKLMEMLPGEGDFVSTL 283
+ +I + + L+ +L V
Sbjct: 115 CKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVINDKATIPLLINLLKDPNGDVRNW 174
Query: 284 TKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFVKYNDPIYVKLEKLD 343
S + L++ N V+ I + + +L+K
Sbjct: 175 AAFAININKYDNSDIRDCFVEMLQDKNEEVRIEAII--GLSYRKDKRVLSVLCDELKKNT 232
Query: 344 IMIRLA---SQANIAQVLSELKEYATEVDVDFVRK-AVRAIGR 382
+ + + +L L + D + + A+ + R
Sbjct: 233 VYDDIIEAAGELGDKTLLPVLDTMLYKFDDNEIITSAIDKLKR 275
Score = 46.4 bits (108), Expect = 8e-06
Identities = 18/147 (12%), Positives = 46/147 (31%), Gaps = 14/147 (9%)
Query: 584 EPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAA 643
+ L + L D + R ++A + +A + + SD N +
Sbjct: 22 DELFRLLDDHNSLKRISSARVLQLRGGQDA--------VRLAIEFCSDKNYIRRDIGAFI 73
Query: 644 LSEMNEASTSGVALIEMNAQTINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQSICE 703
L ++ + + ALN+ + + ++S + K+ + I E
Sbjct: 74 LGQIKICKKCEDNVFNI------LNNMALNDKSACVRATAIESTAQRCKKNPIYSPKIVE 127
Query: 704 RITPRLAHANAAVVLSAVKVLMKLMEM 730
+ + V + + + +
Sbjct: 128 QSQITAFDKSTNVRRATAFAISVINDK 154
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId:
9606]}
Length = 458
Score = 48.3 bits (113), Expect = 3e-06
Identities = 51/337 (15%), Positives = 109/337 (32%), Gaps = 30/337 (8%)
Query: 319 ILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVR 378
I E+ V P V ++ + + ++ E D + +
Sbjct: 115 IACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILT 174
Query: 379 AIGRCAIKVEQSAERCVSTLLDLIQ-----TKYAERIDNADELLESFLEGFHDENTQVQL 433
AI + K E S ++ L+ ++ +++ E +T+V++
Sbjct: 175 AIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRV 234
Query: 434 QLLTAIVKLFLKRPTDTQELVQQV---LSLATQDSDNPDLRDRGFIYWRLLSTGNTFYIL 490
L +VK+ + + +++ SD ++ +G +W + +
Sbjct: 235 AALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAI 294
Query: 491 LHL-------TRLVIASMTVGKDVSALFPDVVN-------CMQTDNLELKKLVYLYLMNY 536
+ + L P + D+ K + LM
Sbjct: 295 EASEAAEQGRPPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLL 354
Query: 537 AKSHPDMAIMAVNTFVKDC-EDSNPLIRALAVRTMGCI-------RVDKITEYLCEPLRK 588
A D + V F+K+ ++ + R AV GCI ++ + L +
Sbjct: 355 ATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIE 414
Query: 589 CLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQL 625
+KD VR TAA V ++ ++ + + +L L
Sbjct: 415 LMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPL 451
Score = 39.8 bits (91), Expect = 0.001
Identities = 22/112 (19%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Query: 92 FYQKSSSSFQCMIDIRSIPLFDLCSSVGVFVKDC-EDSNPLIRALAVRTMGCI------- 143
+ ++ C++ + + D+ V F+K+ ++ + R AV GCI
Sbjct: 340 DWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPS 399
Query: 144 RVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQL 195
++ + L + +KD VR TAA V ++ ++ + + +L L
Sbjct: 400 QLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAINDVYLAPL 451
Score = 37.9 bits (86), Expect = 0.005
Identities = 22/172 (12%), Positives = 55/172 (31%), Gaps = 8/172 (4%)
Query: 51 FPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAFSTFFYQKSSSSFQCMIDIRSIP 110
F + M++D E+ + N D+AI A + ++
Sbjct: 260 FAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQ 319
Query: 111 -----LFDLCSSVGVFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDP 165
L + D + + + + + D I ++ +++ +K+ D
Sbjct: 320 YLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDW 379
Query: 166 YVRKTAAVC---VAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANAVAAI 214
R A + + + + + + L +L+ D + +V A +
Sbjct: 380 RYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTV 431
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 959
Score = 48.0 bits (113), Expect = 5e-06
Identities = 82/769 (10%), Positives = 214/769 (27%), Gaps = 91/769 (11%)
Query: 150 EYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVED-QGFLDQLKDLLSDSNPMVVA 208
E + + + + ++ ++ + ++ + L L LS+ + +
Sbjct: 84 ELIKKEIVPLMISLPNNLQVQIGEAISSI--ADSDFPDRWPTLLSDLASRLSNDDMVTNK 141
Query: 209 NAVAAILLLPRKSYWQRNLSSRKKQICWNLPYLMNLSVIYPAWPLSTINPHTPLLKVLMK 268
+ + ++ +I L P L +L
Sbjct: 142 GVLTVAHSIFKRWRPLFRSDELFLEIKLVLDVFTA-----------------PFLNLLKT 184
Query: 269 LMEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFF 328
+ E + + ++L LV + +Q I +
Sbjct: 185 VDEQITANENNKASLNILFDVLLVLIKLYYDFNCQDIPEFFEDNIQVGMGIFHKYLSYSN 244
Query: 329 VKYNDPIYVKLEKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKV- 387
DP + + I ++ + Q + + ++ + +F++ + + +
Sbjct: 245 PLLEDPDETEHASVLIKVKSSIQELVQLYTTRYEDVFGPMINEFIQITWNLLTSISNQPK 304
Query: 388 -EQSAERCVSTLLDLIQTKYAERIDNADELLESFLEGFHDENTQVQLQLLTAIVKLFLKR 446
+ + +S L + + I N + + + E Q++ V L +
Sbjct: 305 YDILVSKSLSFLTAVTRIPKYFEIFNNESAMNNITE-----------QIILPNVTLREED 353
Query: 447 PTDTQELVQQVLSLATQDSDNPDLRDRGFIYWRLLSTGN---TFYILLHLTRLVIASMTV 503
++ + + + SD R + + L N I L + +
Sbjct: 354 VELFEDDPIEYIRRDLEGSDTDTRRRACTDFLKELKEKNEVLVTNIFLAHMKGFVDQYMS 413
Query: 504 GKDVSALFPDVVNCMQTDNLELKKLVYLYL--MNYAKSHPDMAIMAVNTFVKDCEDSNPL 561
+ F D+ + T + + N + D + + + +
Sbjct: 414 DPSKNWKFKDLYIYLFTALAINGNITNAGVSSTNNLLNVVDFFTKEIAPDLTSNNIPHII 473
Query: 562 IRALAVRTMGCIRVDKITEYLCE---PLRKCLKDEDPYVRKTAAVCVAKLYDI------N 612
+R A++ + R L E L L+ ++ V AA+ + K+ I
Sbjct: 474 LRVDAIKYIYTFRNQLTKAQLIELMPILATFLQTDEYVVYTYAAITIEKILTIRESNTSP 533
Query: 613 AQLVEDQGFLDQLKDLLS----------DSNPMVVANAVAALSEMNEASTSGVALIEMNA 662
A + + + + LL S + N S TS ++ +
Sbjct: 534 AFIFHKEDISNSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSEDSIQPLFP 593
Query: 663 QTINKLLTALNECTEWGQ-----VFILDSLSNYSPKDDREA-QSICERITPRLAHANAAV 716
Q + + + + + + +S+ R+ + + + P +
Sbjct: 594 QLLAQFIEIVTIMAKNPSNPRFTHYTFESIGAILNYTQRQNLPLLVDSMMPTFLTVFSED 653
Query: 717 VLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLSSE-PEVQYVALRNINLIVQKRP 775
+ + + +++ + + + K LA PL+ E R + ++
Sbjct: 654 IQEFIPYVFQIIAFVVEQSATIPESIKPLAQPLLAPNVWELKGNIPAVTRLLKSFIKTDS 713
Query: 776 DILKHEMKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPN 835
I + V + E +++ I
Sbjct: 714 SIFPDLVPVLGIFQRLIASKAYE---------------------VHGFDLLEHIMLLIDM 752
Query: 836 KY-----ETIISTLCENLDTLDEPEARASMIWIIGEYAERIDNADELLE 879
+ I L + L + G + ++ +D L+
Sbjct: 753 NRLRPYIKQIAVLLLQRLQNSKTERYVKKLTVFFGLISNKL-GSDFLIH 800
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 457
Score = 39.8 bits (91), Expect = 0.001
Identities = 25/131 (19%), Positives = 39/131 (29%), Gaps = 4/131 (3%)
Query: 584 EPLRKCLKDEDPYVRKTAAVCVAKL---YDINAQLVEDQGFLDQLKDLLSDSNPMVVANA 640
+ L +D + A + + Q V G + +L DLL N V A
Sbjct: 5 PKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAA 64
Query: 641 VAALSEMNEASTSGVALIEMNAQTINKLLTALNECTEWGQVFILDSLSNYSPKDDREAQS 700
AL + ST+ I + ++ L L L D +
Sbjct: 65 AGALRNLVFRSTTNKLET-RRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEE 123
Query: 701 ICERITPRLAH 711
+ P LA
Sbjct: 124 LIADALPVLAD 134
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter
vinelandii [TaxId: 354]}
Length = 233
Score = 34.7 bits (79), Expect = 0.036
Identities = 35/247 (14%), Positives = 70/247 (28%), Gaps = 71/247 (28%)
Query: 538 KSHPDMAIMAVNTFVKDCEDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYV 597
+++P +A+ + D RA+AVR E L ++D D V
Sbjct: 41 RNNPHLAVQYL-------ADPFWERRAIAVRYSPV-----------EALTPLIRDSDEVV 82
Query: 598 RKTAAVCVAKLYDINAQLVEDQGFLDQLKDLLSDSNPMVVANA-----VAALSEMNEAST 652
R+ A + + +QL L+ D + V + L +M
Sbjct: 83 RRAVAYRLPR---------------EQLSALMFDEDREVRITVADRLPLEQLEQMAADRD 127
Query: 653 SGVALIEMNAQTINKLLTALN--------ECTEWGQVFILDSLSNYSPKDDREA---QSI 701
V + +L + + L ++ + R +
Sbjct: 128 YLVRAYVVQRIPPGRLFRFMRDEDRQVRKLVAKRLPEESLGLMTQDPEPEVRRIVASRLR 187
Query: 702 CERITPRLAHANAAVVLSAVKVLMKLMEMLPGEGDFVSTLTKKLAPPLVTLLS-SEPEVQ 760
+ + L + V L+AV + + + L +PEV+
Sbjct: 188 GDDLLELLHDPDWTVRLAAV---------------------EHASLEALRELDEPDPEVR 226
Query: 761 YVALRNI 767
+
Sbjct: 227 LAIAGRL 233
Score = 33.9 bits (77), Expect = 0.054
Identities = 30/209 (14%), Positives = 56/209 (26%), Gaps = 52/209 (24%)
Query: 126 EDSNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQL 185
D RA+AVR E L ++D D VR+ A + +
Sbjct: 52 ADPFWERRAIAVRYSPV-----------EALTPLIRDSDEVVRRAVAYRLPR-------- 92
Query: 186 VEDQGFLDQLKDLLSDSNPMVVANA-----VAAILLLPRKSYWQRNLSSRKKQICWNLPY 240
+QL L+ D + V + + + + ++ L
Sbjct: 93 -------EQLSALMFDEDREVRITVADRLPLEQLEQMAADRDYLVRAYVVQRIPPGRLFR 145
Query: 241 LMNLSVIYPAWPLSTINPHTPLLKVLMK------------------LMEMLPGEGDFV-S 281
M L L ++ + L+E+L V
Sbjct: 146 FMRDEDRQ-VRKLVAKRLPEESLGLMTQDPEPEVRRIVASRLRGDDLLELLHDPDWTVRL 204
Query: 282 TLTKKLAPPLVTLLS-SEPEVQYVALRNI 309
+ + + L +PEV+ +
Sbjct: 205 AAVEHASLEALRELDEPDPEVRLAIAGRL 233
Score = 30.9 bits (69), Expect = 0.49
Identities = 10/60 (16%), Positives = 19/60 (31%), Gaps = 12/60 (20%)
Query: 125 CEDSNPLIRALAVRTMGCIRVDK------------ITEYLCEPLRKCLKDEDPYVRKTAA 172
+D P +R + + + + E+ + L + DP VR A
Sbjct: 171 TQDPEPEVRRIVASRLRGDDLLELLHDPDWTVRLAAVEHASLEALRELDEPDPEVRLAIA 230
>d2b6ca1 a.118.1.17 (A:3-215) Hypothetical protein EF3068
{Enterococcus faecalis [TaxId: 1351]}
Length = 213
Score = 33.1 bits (75), Expect = 0.10
Identities = 19/167 (11%), Positives = 49/167 (29%), Gaps = 7/167 (4%)
Query: 31 REAVKKVIASMTVGKDVSALFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAFST 90
+ K+++ L ++ Q E + V + L + +
Sbjct: 33 QALSKQLLKESHT-WPKEKLCQEIEAYYQKTEREYQ-YVAIDLALQNVQRFSLEEVVAFK 90
Query: 91 FFYQKSSS---SFQCMIDIRSIPLFDLCSSVGVFVKDCEDSNPLIRALAVRTMGCIRVDK 147
+ + + S L +F N R +A+ ++
Sbjct: 91 AYVPQKAWWDSVDAWRKFFGSWVALHLTELPTIFALFYGAENFWNRRVALNLQLMLKEKT 150
Query: 148 ITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLYDINAQLVEDQGFLDQ 194
+ L + + E+ +++K + + N Q VE+ + +
Sbjct: 151 NQDLLKKAIIYDRTTEEFFIQKAIGWSLRQYSKTNPQWVEE--LMKE 195
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId:
10090]}
Length = 434
Score = 33.2 bits (74), Expect = 0.15
Identities = 21/196 (10%), Positives = 44/196 (22%), Gaps = 15/196 (7%)
Query: 154 EPLRKCLKDEDPYVRKTAAVCVAKLYDINA----QLVEDQGFLDQLKDLLSDSNPMVVAN 209
E + K + + + A KL + G + + L ++ +
Sbjct: 16 EDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQF 75
Query: 210 AVAAILLLPRKSYWQRNLSSRKKQICWNLPYLMNLSVIYPAWPLSTINPHTPLLKVLMKL 269
A L N++S + + + + + L +
Sbjct: 76 ESAWAL---------TNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNI 126
Query: 270 MEMLPGEGDFVSTLTKKLAPPLVTLLSSEPEVQYVALRNINLIVQKRPDILKHEMKVFFV 329
D V + PL+ LL+ NL
Sbjct: 127 AGDGSAFRDLV--IKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLD 184
Query: 330 KYNDPIYVKLEKLDIM 345
+ + L
Sbjct: 185 AVEQILPTLVRLLHHN 200
Score = 32.8 bits (73), Expect = 0.16
Identities = 9/83 (10%), Positives = 24/83 (28%), Gaps = 5/83 (6%)
Query: 584 EPLRKCLKDEDPYVRKTAAVCVAKLYDINA----QLVEDQGFLDQLKDLLSDS-NPMVVA 638
E + K + + + A KL + G + + L + +
Sbjct: 16 EDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQF 75
Query: 639 NAVAALSEMNEASTSGVALIEMN 661
+ AL+ + ++ +
Sbjct: 76 ESAWALTNIASGTSEQTKAVVDG 98
>d1n5ua3 a.126.1.1 (A:389-584) Serum albumin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 196
Score = 27.6 bits (61), Expect = 5.2
Identities = 7/45 (15%), Positives = 13/45 (28%), Gaps = 2/45 (4%)
Query: 510 LFPDVVNCMQTDNLELKKLVYLYLMNYAKSHPDMAIMAVNTFVKD 554
F + + ++KK L K P + + D
Sbjct: 120 TFHADICTLSEKERQIKKQTALV--ELVKHKPKATKEQLKAVMDD 162
>d1guqa2 d.13.1.2 (A:178-348) Galactose-1-phosphate
uridylyltransferase {Escherichia coli [TaxId: 562]}
Length = 171
Score = 27.3 bits (60), Expect = 5.8
Identities = 12/93 (12%), Positives = 32/93 (34%), Gaps = 9/93 (9%)
Query: 782 MKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVNYVVQEAIVVIKDIFRKYPNKYETII 841
K +F + P+ V + ++ A + E + + + +P + +
Sbjct: 9 QKEYFAEQKSPMLVDYVQREL----ADGSRTVVET----EHWLAVVPYWAAWPFETLLLP 60
Query: 842 STLCENLDTLDEPEARASMIWIIGEYAERIDNA 874
+ L + + R+ + + + R DN
Sbjct: 61 KAHVLRITDLTDAQ-RSDLALALKKLTSRYDNL 92
>d2nw8a1 a.266.1.1 (A:23-284) Tryptophan 2,3-dioxygenase
{Xanthomonas campestris pv. campestris [TaxId: 340]}
Length = 262
Score = 27.4 bits (60), Expect = 6.6
Identities = 11/53 (20%), Positives = 21/53 (39%)
Query: 340 EKLDIMIRLASQANIAQVLSELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAE 392
E L I+ S+ + + EL+ + D V + + + R + Q E
Sbjct: 26 EMLFIIQHQTSELWLKLLAHELRAAIVHLQRDEVWQCRKVLARSKQVLRQLTE 78
>d2z5fa_ c.37.1.5 (A:) Thyroid hormone sulfotransferase Sult1b1
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 27.5 bits (60), Expect = 7.4
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 2/41 (4%)
Query: 827 KDIFRKYPNKYETIISTLC--ENLDTLDEPEARASMIWIIG 865
KDI RK T N + +++ +R I I
Sbjct: 2 KDILRKDLKLVHGYPMTCAFASNWEKIEQFHSRPDDIVIAT 42
>d1pu1a_ d.266.1.1 (A:) Hypothetical protein MTH677 {Archaeon
Methanobacterium thermoautotrophicum [TaxId: 145262]}
Length = 91
Score = 25.8 bits (56), Expect = 7.9
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 385 IKVEQSAERCVSTLLDLIQTKYAERIDNADELLESFLEGFHD 426
+KV+ SAE + L D E +D A LESFL+GF +
Sbjct: 50 LKVDISAELYLDELSDADPGIVDEAVDAAYRSLESFLDGFRE 91
>d1mkfa_ b.116.1.1 (A:) Viral chemokine binding protein m3 {Murid
herpesvirus 4, MuHV-4 [TaxId: 33708]}
Length = 371
Score = 27.4 bits (60), Expect = 9.5
Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Query: 71 LYLMNYAKSHPDMAIMAFSTFFYQKSSSSFQCMIDIRSIPLFDLCSSVG 119
+++++ KS+ D+ ++ +TF Q + MI F C +G
Sbjct: 142 VWMIDIPKSYVDVGMLTRATFLEQWPGAKVTVMIPY--SSTFTWCGELG 188
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.135 0.385
Gapped
Lambda K H
0.267 0.0488 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,114,660
Number of extensions: 147147
Number of successful extensions: 486
Number of sequences better than 10.0: 1
Number of HSP's gapped: 413
Number of HSP's successfully gapped: 70
Length of query: 883
Length of database: 2,407,596
Length adjustment: 93
Effective length of query: 790
Effective length of database: 1,130,706
Effective search space: 893257740
Effective search space used: 893257740
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.3 bits)