BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2920
(325 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|189237687|ref|XP_969192.2| PREDICTED: similar to Neural-cadherin precursor (Cadherin-N
protein) (DN-cadherin) [Tribolium castaneum]
Length = 3035
Score = 347 bits (889), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 186/330 (56%), Positives = 240/330 (72%), Gaps = 13/330 (3%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNST---ESK 58
ENS +GT V GLP+L A+S + + YSI GN F L++ T ++ + +S+
Sbjct: 116 ENSPAGTKVGGLPVLQAASGLTTNPIT-YSIIGGNVGQAFELRSSVTGDVMPNVTVGDSQ 174
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+GV +VT+ +DREE ++Y L I A+D G+NKA +V ++V DENDNSPVFSQKVYRF+
Sbjct: 175 AGVDIVTAQVLDREETSRYVLTIQASDPLGVNKAVINVVIEVEDENDNSPVFSQKVYRFV 234
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDP 178
VGD ++ + WK+FSSIG V ATDADGDKVAY+LA P+N +VIVPQTG+LLL+ +
Sbjct: 235 VGDDSLEGDNVTTTWKRFSSIGKVEATDADGDKVAYRLATPTNYLVIVPQTGDLLLS-EE 293
Query: 179 PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSP----VLQDEQLLQMIDRKSEAPHR 234
P+++V+ EL VEAHDL++PSR + PAQV +F P V D L Q+ +R+ HR
Sbjct: 294 PTEEVDLELVVEAHDLRTPSRTSPRPAQVLFKFKPPESSKVELDLDLQQLAEREL---HR 350
Query: 235 IEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVR 294
KRRVTRAVRPTKRI+F+E+DG+ EGR VF LEKET+RE FKIRDENPW+TVD NG VR
Sbjct: 351 -GKRRVTRAVRPTKRIEFTESDGDTEGRNVFQLEKETDRETFKIRDENPWVTVDPNGAVR 409
Query: 295 VKKRWDFEELGPEKTIDFWVTINNQATNGG 324
VKK+WD+EELGPEKTIDFWVTI N + G
Sbjct: 410 VKKKWDYEELGPEKTIDFWVTITNAEKSAG 439
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 64/143 (44%), Gaps = 30/143 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L + A+D
Sbjct: 1367 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRKRYELRLAASD-- 1411
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ + T V + V D NDN PVF + YR + + N+ S+ V+ATD
Sbjct: 1412 NLKENYTTVVIHVKDVNDNPPVFERPTYR---TQITEEDDRNLP-----KSVLRVTATDG 1463
Query: 148 DGDKVAYKLAVPSNLVVIVPQTG 170
D D+ P N+V + G
Sbjct: 1464 DKDR-------PQNIVYFLTGQG 1479
>gi|270008134|gb|EFA04582.1| DN cadherin-like protein [Tribolium castaneum]
Length = 487
Score = 346 bits (888), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 185/324 (57%), Positives = 238/324 (73%), Gaps = 13/324 (4%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNST---ESK 58
ENS +GT V GLP+L A+S + + YSI GN F L++ T ++ + +S+
Sbjct: 121 ENSPAGTKVGGLPVLQAASGLTTNPIT-YSIIGGNVGQAFELRSSVTGDVMPNVTVGDSQ 179
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+GV +VT+ +DREE ++Y L I A+D G+NKA +V ++V DENDNSPVFSQKVYRF+
Sbjct: 180 AGVDIVTAQVLDREETSRYVLTIQASDPLGVNKAVINVVIEVEDENDNSPVFSQKVYRFV 239
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDP 178
VGD ++ + WK+FSSIG V ATDADGDKVAY+LA P+N +VIVPQTG+LLL+ +
Sbjct: 240 VGDDSLEGDNVTTTWKRFSSIGKVEATDADGDKVAYRLATPTNYLVIVPQTGDLLLS-EE 298
Query: 179 PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSP----VLQDEQLLQMIDRKSEAPHR 234
P+++V+ EL VEAHDL++PSR + PAQV +F P V D L Q+ +R+ HR
Sbjct: 299 PTEEVDLELVVEAHDLRTPSRTSPRPAQVLFKFKPPESSKVELDLDLQQLAEREL---HR 355
Query: 235 IEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVR 294
KRRVTRAVRPTKRI+F+E+DG+ EGR VF LEKET+RE FKIRDENPW+TVD NG VR
Sbjct: 356 -GKRRVTRAVRPTKRIEFTESDGDTEGRNVFQLEKETDRETFKIRDENPWVTVDPNGAVR 414
Query: 295 VKKRWDFEELGPEKTIDFWVTINN 318
VKK+WD+EELGPEKTIDFWVTI N
Sbjct: 415 VKKKWDYEELGPEKTIDFWVTITN 438
>gi|328702680|ref|XP_003241980.1| PREDICTED: neural-cadherin-like [Acyrthosiphon pisum]
Length = 1040
Score = 339 bits (870), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 181/333 (54%), Positives = 225/333 (67%), Gaps = 17/333 (5%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALK---NPTTHEIRNSTESK 58
EN GT V+G+P+L A +RY+I GND+ FALK N I N + +
Sbjct: 150 ENKPPGTRVRGVPVLHAFGEGVAGLPIRYAIVDGNDDGAFALKTAENIIAGNITNKSYYR 209
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
GV LVT +DRE+ Y L++ A D GI+KA V VDVLDENDNSPVF Q +Y+
Sbjct: 210 -GVHLVTKRPLDREQRPSYDLIVQAADGSGIDKAYATVHVDVLDENDNSPVFGQALYKIN 268
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDP 178
V L++ + ++S++G VSA DADGD+VAY+L+ PS+ VV+VPQTGELL+
Sbjct: 269 VDGFALGLDNGTAGPGRYSAVGRVSAVDADGDRVAYRLSAPSSAVVVVPQTGELLV---- 324
Query: 179 PSDDV-------EYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEA 231
SDDV E +LTV+AHDL+ PSR A PA VW+Q+N VL D+ L+Q +A
Sbjct: 325 -SDDVLRSREYFECQLTVDAHDLREPSRVADRPATVWIQYNFVVLDDDVLMQDFGAYDDA 383
Query: 232 P-HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDEN 290
HR+ KRRVTRAVRPTKRI+F+ETDGE EGR VF LEKETE+E FKIRDENPW+TV+ N
Sbjct: 384 ADHRVYKRRVTRAVRPTKRIEFTETDGEQEGRSVFPLEKETEKETFKIRDENPWVTVEPN 443
Query: 291 GDVRVKKRWDFEELGPEKTIDFWVTINNQATNG 323
G VRVKK+WD+EELGPEKTIDFWVTI N G
Sbjct: 444 GAVRVKKKWDYEELGPEKTIDFWVTITNAGVGG 476
>gi|158298604|ref|XP_001238041.2| AGAP009725-PA [Anopheles gambiae str. PEST]
gi|157013964|gb|EAU76025.2| AGAP009725-PA [Anopheles gambiae str. PEST]
Length = 1325
Score = 324 bits (831), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 177/330 (53%), Positives = 226/330 (68%), Gaps = 12/330 (3%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEI----RNSTES 57
EN GT V+ +P+L A+S + ++ YSI GN+ FAL++ +T I R
Sbjct: 121 ENKDGGTRVRDIPLLQANSARGAKTVI-YSIVGGNEGDAFALEDSSTGTIGTTIRIDDPR 179
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
K GV LV++ +DRE QY+L I ATD K INKAE H+ V + D NDN PVF + YRF
Sbjct: 180 KHGVWLVSAKPLDREHREQYTLAIEATDTKRINKAEVHLPVHITDVNDNRPVFGKPDYRF 239
Query: 118 IVGDLKSSL---NSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLL 174
V +K++ N V+ W++F+S+G V A DADGDKVAY+L PSN VVIVPQTGELLL
Sbjct: 240 TVTGMKATTPAGNETVT-WERFTSVGRVEAKDADGDKVAYRLTSPSNTVVIVPQTGELLL 298
Query: 175 TGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHR 234
G+P D E + VEAHDL++PS + +PA+V ++F +P +LQ + + HR
Sbjct: 299 AGEP--DAPELFVDVEAHDLRTPSLKSEKPARVLVEFVAPDPL-PVILQHSGHEYQHSHR 355
Query: 235 IEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVR 294
+KRRVTRAVRPTKRI+F+E DG+ EGR VF LEKET+RE FKIRDENPW+TV+ NG VR
Sbjct: 356 RDKRRVTRAVRPTKRIEFTEADGDTEGRNVFQLEKETDRETFKIRDENPWVTVETNGAVR 415
Query: 295 VKKRWDFEELGPEKTIDFWVTINNQATNGG 324
VKK+WD+EELGPEKTIDFWV I NQ N G
Sbjct: 416 VKKKWDYEELGPEKTIDFWVIITNQGHNAG 445
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 85/192 (44%), Gaps = 34/192 (17%)
Query: 28 VRYSI-TQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQ---YSLVITA 83
+RY++ QG TF + PT SG++ + + ++D E++ Q YSLV+TA
Sbjct: 608 IRYTLKAQGQGAGTFNI-GPT-----------SGIVKL-AKELDFEDLRQPHVYSLVVTA 654
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
T+ G +T+ V D NDN+P F Y+ D L +++ K S +
Sbjct: 655 TEDSGGFSTSVELTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILKVKAMDSDSGAN 714
Query: 144 ATDADGDKVAY-----KLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPS 198
A ++ Y AV SN +++ +L D +++ YE V A D P+
Sbjct: 715 A------EIEYLVSDDHFAVDSNGIIV--NNKQL----DADNNNAYYEFVVTAKDKGEPA 762
Query: 199 RYAREPAQVWLQ 210
+ +V+ +
Sbjct: 763 KTGTATVRVYTK 774
>gi|312385594|gb|EFR30049.1| hypothetical protein AND_00580 [Anopheles darlingi]
Length = 544
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 172/330 (52%), Positives = 231/330 (70%), Gaps = 13/330 (3%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTE----S 57
EN + G V+ LP+L A+S + Q++ Y+IT GN+ H FAL++ +T EI+++
Sbjct: 214 ENREPGARVRDLPLLQANSVRGAKQIL-YTITAGNEGHEFALEDSSTGEIKDTVRIEDPR 272
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
K GV LV + +DRE Y++V+ ATD + IN+AE + V + D NDN PVF++ YRF
Sbjct: 273 KHGVWLVAAKPLDREHQDAYTVVVEATDARQINRAEIRLPVHITDVNDNRPVFTKPDYRF 332
Query: 118 IVGDLKS---SLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLL 174
V +KS + N ++ W++F+S+G V A DADGD+VAY+L PSN VVIVPQTGELLL
Sbjct: 333 TVTGIKSVTPAGNETIT-WQRFTSVGKVEAKDADGDRVAYRLTAPSNTVVIVPQTGELLL 391
Query: 175 TGDPPSDDVEYELTVEAHDLQSPSRYARE-PAQVWLQFNSPVLQDEQLLQMIDRKSEAPH 233
G+P D E + VEAHDL++P+ E PA+V ++F +P ++Q + + + H
Sbjct: 392 AGEP--DMAELFVDVEAHDLRTPTSLKSERPARVLIEFVAPD-PLPVIVQHMGHEYQHSH 448
Query: 234 RIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDV 293
R +KRRVTRAVRPTKRI+F+E DG+ EGR VF LEKET+RE FKIRDENPW+TV+ NG V
Sbjct: 449 RRDKRRVTRAVRPTKRIEFTEADGDTEGRNVFQLEKETDRETFKIRDENPWVTVETNGAV 508
Query: 294 RVKKRWDFEELGPEKTIDFWVTINNQATNG 323
RVKK+WD+EELGPEKTIDFWV I NQ NG
Sbjct: 509 RVKKKWDYEELGPEKTIDFWVIITNQGHNG 538
>gi|170061113|ref|XP_001866096.1| predicted protein [Culex quinquefasciatus]
gi|167879347|gb|EDS42730.1| predicted protein [Culex quinquefasciatus]
Length = 542
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 169/325 (52%), Positives = 229/325 (70%), Gaps = 10/325 (3%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTE----S 57
EN +GT V+ LPIL A+S + ++ Y+I GN H FAL++ +T EI+++
Sbjct: 198 ENKPAGTRVRELPILQANSARGAKTVI-YTIASGNAGHEFALEDSSTGEIKDTVRIDDTR 256
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
K GV LV++ +DRE Y+LV+ A+D K INKA+ + V +LD NDN P F++ YRF
Sbjct: 257 KHGVFLVSNKPLDRESKDLYTLVLEASDPKKINKAQVKLQVKILDVNDNHPTFTKPDYRF 316
Query: 118 IVGDLKSSLN--SNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLT 175
V +KS+ N + +++F+S+G V A DADGDKVAY+L PSN VVIVPQTGELLL
Sbjct: 317 TVNGVKSTNNYGNETISYERFTSVGKVEAKDADGDKVAYRLLNPSNTVVIVPQTGELLLA 376
Query: 176 GDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRI 235
G+P D E + VEAHD+++PS + +PA+V ++F +P ++Q ++ + + HR
Sbjct: 377 GEP--DTPELFIDVEAHDIRTPSLKSVKPARVLVEFVAPD-PIPVVVQHLNHEYQHSHRR 433
Query: 236 EKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRV 295
+KRRVTRAVRPTKRI+F+E DG+ EGR VF LEKET++E FKIRDENPW+TV+ NG VRV
Sbjct: 434 DKRRVTRAVRPTKRIEFTEADGDSEGRNVFQLEKETDKETFKIRDENPWVTVETNGAVRV 493
Query: 296 KKRWDFEELGPEKTIDFWVTINNQA 320
KK+WD+EELGPEKTIDFWV I NQ
Sbjct: 494 KKKWDYEELGPEKTIDFWVIITNQG 518
>gi|195388064|ref|XP_002052710.1| GJ20220 [Drosophila virilis]
gi|194149167|gb|EDW64865.1| GJ20220 [Drosophila virilis]
Length = 3328
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 170/343 (49%), Positives = 228/343 (66%), Gaps = 25/343 (7%)
Query: 2 ENSKSGTGVKGLPILVASSHK-------HPHQLVRYSITQGNDNHTFALKNPTTHE---- 50
EN +GT V+G+P++ A S P + VRY+I GN + FAL+ ++
Sbjct: 215 ENHPAGTRVRGVPLMQAFSGSILDEELAQPKK-VRYTIIDGNVDDAFALQERRANQNVQL 273
Query: 51 ----IRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDN 106
+ + +SGV LVT+ +DREE + Y L + A+DV G++K + + + VLDENDN
Sbjct: 274 NAKSLVIEGDDESGVWLVTNRPLDREERSHYDLSVEASDVDGLDKTVSKIQITVLDENDN 333
Query: 107 SPVFSQKVYRFIVGDLKSSLNS---NVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLV 163
PVF + Y+F + K SLNS N W++F+ +G V ATDADGDK+AY+L PSN+V
Sbjct: 334 RPVFKSQDYKFAIAG-KKSLNSDSNNSVSWQRFAILGRVEATDADGDKIAYRLKSPSNVV 392
Query: 164 VIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSP--VLQDEQL 221
+IVPQTGEL+L G+P ++ E L V AHDL+ PS + +PA+V L+F +P V Q
Sbjct: 393 IIVPQTGELMLAGEPTTN--ELLLEVIAHDLRYPSLLSAQPAKVLLEFLAPEPVSFIMQH 450
Query: 222 LQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDE 281
L+ D +E H EKRRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD+
Sbjct: 451 LEH-DAVNEHSHHREKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDD 509
Query: 282 NPWITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
NPW+TV+ NG VRVKK+WDFEELGP+KTIDFWV I N N G
Sbjct: 510 NPWVTVETNGAVRVKKKWDFEELGPDKTIDFWVIITNMGHNAG 552
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 15/89 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L + A+D
Sbjct: 1532 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRRRYELRLAASD-- 1576
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYR 116
+ + T V + V D NDN PVF + YR
Sbjct: 1577 NLKENYTTVIIHVKDVNDNPPVFERPTYR 1605
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 37/141 (26%)
Query: 78 SLVITATD-----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSH 132
S+ + ATD ++G+ TV++ D NDN P+F ++ Y V +
Sbjct: 1077 SVTVKATDQGDPSLEGV----CSFTVEITDVNDNPPLFDRQKY--------------VEN 1118
Query: 133 WKKFSSIGS----VSATDADGDK---VAYKLAVPSN-----LVVIVPQTGELLLTGDPPS 180
K+ +SIG+ VSA+D D D + Y L+ P N I ++G ++L P
Sbjct: 1119 VKQDASIGTNILRVSASDEDADNNGAIVYSLSAPFNPNDLEYFDIQAESGWIVLKK--PL 1176
Query: 181 DDVEYELTVEAHDLQSPSRYA 201
D Y L V A D P YA
Sbjct: 1177 DRDRYRLRVRASDRGDPPSYA 1197
>gi|195065835|ref|XP_001996748.1| GH25256 [Drosophila grimshawi]
gi|193891968|gb|EDV90834.1| GH25256 [Drosophila grimshawi]
Length = 1243
Score = 304 bits (778), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 168/342 (49%), Positives = 230/342 (67%), Gaps = 23/342 (6%)
Query: 2 ENSKSGTGVKGLPILVASSHK-------HPHQLVRYSITQGNDNHTFALKNPTTHE-IRN 53
EN +GT V+G+P++ A S P + VRY+I GN N FAL+ ++ +++
Sbjct: 215 ENHPAGTRVRGVPLMQAFSGSILDEELAKPKK-VRYTIIDGNVNDAFALQERRANQNVQS 273
Query: 54 STES-------KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDN 106
+ +S +SGV LVT+ +DREE A Y L + A+DV G++K + + + VLDENDN
Sbjct: 274 NAKSLTIEGDDESGVWLVTNRPLDREERAHYDLSVEASDVGGLDKTVSKIQITVLDENDN 333
Query: 107 SPVFSQKVYRFIVGDLKSS--LNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVV 164
PVF + Y+F + KS +N W++F+ +G V ATDADGDK+AY+L PSN+V+
Sbjct: 334 RPVFKSQDYKFAIAGKKSQNMEGNNSISWQRFAILGKVEATDADGDKIAYRLKSPSNVVI 393
Query: 165 IVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSP--VLQDEQLL 222
IVPQTGEL+L G+P + E L V AHDL+ PS + +PA+V L+F +P V Q L
Sbjct: 394 IVPQTGELMLAGEPSTS--ELLLEVIAHDLRYPSLLSAQPAKVLLEFLAPEPVSFIMQHL 451
Query: 223 QMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDEN 282
+ + + + HR EKRRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD+N
Sbjct: 452 EHDEVNAHSHHR-EKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDN 510
Query: 283 PWITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
PW+TV+ NG VRVKK+WD+EELGP+KTIDFWV I N N G
Sbjct: 511 PWVTVETNGAVRVKKKWDYEELGPDKTIDFWVIITNMGHNAG 552
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 37/141 (26%)
Query: 78 SLVITATD-----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSH 132
S+ + ATD ++G+ TV++ D NDN P+F ++ Y V +
Sbjct: 1077 SVTVKATDQGDPSLEGV----CSFTVEITDVNDNPPLFDRQKY--------------VEN 1118
Query: 133 WKKFSSIGS----VSATDADGDK---VAYKLAVPSN-----LVVIVPQTGELLLTGDPPS 180
K+ +SIG+ VSA+D D D + Y L+ P N I ++G ++L P
Sbjct: 1119 VKQDASIGTNILRVSASDEDADNNGAIVYSLSAPFNPNDLEYFDIQAESGWIVLKK--PL 1176
Query: 181 DDVEYELTVEAHDLQSPSRYA 201
D Y L V A D P YA
Sbjct: 1177 DRDRYRLRVRASDRGDPPSYA 1197
>gi|303228011|gb|ADM07129.1| LD09349p [Drosophila melanogaster]
Length = 1271
Score = 303 bits (777), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 169/341 (49%), Positives = 232/341 (68%), Gaps = 21/341 (6%)
Query: 2 ENSKSGTGVKGLPILVASSHK------HPHQLVRYSITQGNDNHTFALKNPTTHE-IRNS 54
EN +GT V+G+P++ A S + VRY+I GN + FAL+ ++ I+ S
Sbjct: 183 ENQPAGTRVRGVPLMQAFSGSILDEELATPKKVRYTIIDGNVDDAFALQERKANKNIQIS 242
Query: 55 TES-------KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNS 107
+S +SGV LVT+ +DREE A Y L + A+DV G+++ + + + VLDENDN
Sbjct: 243 AKSLVINGDDESGVWLVTNRPLDREERAHYDLSVEASDVDGLDRTVSKIQITVLDENDNR 302
Query: 108 PVFSQKVYRF-IVGDLKSSLNSNVS-HWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVI 165
P+F Y+F I G +S+ SN S +++F+ +G V ATDADGDK+AY+L PSN+V+I
Sbjct: 303 PIFKSLDYKFAIAGQKSASMESNSSVTYQRFAIMGKVEATDADGDKIAYRLKSPSNVVII 362
Query: 166 VPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNS--PVLQDEQLLQ 223
VPQTGE++L G+P S+++ E V AHDL+ PS + +PA+V L+F + PV Q L+
Sbjct: 363 VPQTGEIMLAGEPTSNELLIE--VIAHDLRYPSLVSAKPAKVLLEFLAAEPVSFIMQHLE 420
Query: 224 MIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENP 283
D + + HR EKRRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD+NP
Sbjct: 421 HDDINNHSHHR-EKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNP 479
Query: 284 WITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
W+TV+ NG VRVKK+WD+EELGPEKTIDFWV I N N G
Sbjct: 480 WVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAG 520
>gi|194880377|ref|XP_001974423.1| GG21728 [Drosophila erecta]
gi|190657610|gb|EDV54823.1| GG21728 [Drosophila erecta]
Length = 1514
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 169/341 (49%), Positives = 232/341 (68%), Gaps = 21/341 (6%)
Query: 2 ENSKSGTGVKGLPILVASSHK------HPHQLVRYSITQGNDNHTFALKNPTTHE-IRNS 54
EN +GT V+G+P++ A S + VRY+I GN + FAL+ ++ I+ S
Sbjct: 183 ENQPAGTRVRGVPLMQAFSGSILDEELATPKKVRYTIIDGNVDDAFALQERKANKNIQIS 242
Query: 55 TES-------KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNS 107
+S +SGV LVT+ +DREE A Y L + A+DV G++K + + + VLDENDN
Sbjct: 243 AKSLVINGDDESGVWLVTNRPLDREERAHYDLSVEASDVDGLDKTVSKIQISVLDENDNR 302
Query: 108 PVFSQKVYRF-IVGDLKSSLNSNVS-HWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVI 165
P+F Y+F I G +S+ SN S +++F+ +G V ATDADGDK+AY+L PSN+V+I
Sbjct: 303 PIFKSLDYKFAIAGQKSASMESNSSVTYQRFAIMGKVEATDADGDKIAYRLKSPSNVVII 362
Query: 166 VPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNS--PVLQDEQLLQ 223
VPQTGE++L G+P S+++ E V AHDL+ PS + +PA+V L+F + PV Q L+
Sbjct: 363 VPQTGEIMLAGEPTSNELLIE--VIAHDLRYPSLLSAKPAKVLLEFLAAEPVSFIMQHLE 420
Query: 224 MIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENP 283
+ + + HR EKRRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD+NP
Sbjct: 421 HDEINNHSHHR-EKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNP 479
Query: 284 WITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
W+TV+ NG VRVKK+WD+EELGPEKTIDFWV I N N G
Sbjct: 480 WVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAG 520
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 37/141 (26%)
Query: 78 SLVITATD-----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSH 132
S+ + ATD ++G+ TV++ D NDN P+F ++ Y V +
Sbjct: 1045 SVTVKATDQGDPSLEGV----CSFTVEITDVNDNPPLFDRQKY--------------VEN 1086
Query: 133 WKKFSSIGS----VSATDADGDK---VAYKLAVPSN-----LVVIVPQTGELLLTGDPPS 180
K+ +SIG+ VSA+D D D + Y L P N I ++G ++L P
Sbjct: 1087 VKQDASIGTNILRVSASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWIVLK--KPL 1144
Query: 181 DDVEYELTVEAHDLQSPSRYA 201
D Y L V A D +P+ A
Sbjct: 1145 DRDRYRLRVSASDKGTPASAA 1165
>gi|195483811|ref|XP_002090443.1| GE13118 [Drosophila yakuba]
gi|194176544|gb|EDW90155.1| GE13118 [Drosophila yakuba]
Length = 3281
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 168/341 (49%), Positives = 233/341 (68%), Gaps = 21/341 (6%)
Query: 2 ENSKSGTGVKGLPILVASSHK------HPHQLVRYSITQGNDNHTFALKNPTTHE-IRNS 54
EN +GT V+G+P++ A S + VRY+I GN++ FAL+ ++ I+ S
Sbjct: 183 ENQPAGTRVRGVPLMQAFSGSILDEELATPKKVRYTIIDGNEDDAFALQERKANKNIQIS 242
Query: 55 TES-------KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNS 107
+S +SGV LVT+ +DREE A Y L + A+DV G++K + + + VLDENDN
Sbjct: 243 AKSLVINGDDESGVWLVTNRPLDREERAHYDLSVEASDVDGLDKTVSKIQISVLDENDNR 302
Query: 108 PVFSQKVYRF-IVGDLKSSLNSNVS-HWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVI 165
P+F Y+F I G +++ SN S +++F+ +G V ATDADGDK+AY+L PSN+V+I
Sbjct: 303 PIFKSLDYKFAIAGQKSANMESNSSVTYQRFAIMGKVEATDADGDKIAYRLKSPSNVVII 362
Query: 166 VPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNS--PVLQDEQLLQ 223
VPQTGE++L G+P S+++ E V AHDL+ PS + +PA+V L+F + PV Q L+
Sbjct: 363 VPQTGEIMLAGEPTSNELLIE--VIAHDLRYPSLLSAKPAKVLLEFLAAEPVSFIMQHLE 420
Query: 224 MIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENP 283
+ + + HR EKRRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD+NP
Sbjct: 421 HDEVNNHSHHR-EKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNP 479
Query: 284 WITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
W+TV+ NG VRVKK+WD+EELGPEKTIDFWV I N N G
Sbjct: 480 WVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAG 520
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 15/89 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L + A+D
Sbjct: 1500 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRRRYELRLAASD-- 1544
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYR 116
+ + T V + V D NDN PVF + YR
Sbjct: 1545 NLKENYTTVIIHVKDVNDNPPVFERPTYR 1573
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 37/141 (26%)
Query: 78 SLVITATD-----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSH 132
S+ + ATD ++G+ TV++ D NDN P+F ++ Y V +
Sbjct: 1045 SVTVKATDQGDPSLEGV----CSFTVEITDVNDNPPLFDRQKY--------------VEN 1086
Query: 133 WKKFSSIGS----VSATDADGDK---VAYKLAVPSN-----LVVIVPQTGELLLTGDPPS 180
K+ +SIG+ VSA+D D D + Y L P N I ++G ++L P
Sbjct: 1087 VKQDASIGTNILRVSASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWIVLK--KPL 1144
Query: 181 DDVEYELTVEAHDLQSPSRYA 201
D Y L V A D +P+ A
Sbjct: 1145 DRDRYRLRVSASDKGTPASAA 1165
>gi|24584871|ref|NP_724070.1| Cadherin-N, isoform F [Drosophila melanogaster]
gi|22946725|gb|AAN10994.1| Cadherin-N, isoform F [Drosophila melanogaster]
Length = 3096
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/341 (49%), Positives = 232/341 (68%), Gaps = 21/341 (6%)
Query: 2 ENSKSGTGVKGLPILVASSHK------HPHQLVRYSITQGNDNHTFALKNPTTHE-IRNS 54
EN +GT V+G+P++ A S + VRY+I GN + FAL+ ++ I+ S
Sbjct: 183 ENQPAGTRVRGVPLMQAFSGSILDEELATPKKVRYTIIDGNVDDAFALQERKANKNIQIS 242
Query: 55 TES-------KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNS 107
+S +SGV LVT+ +DREE A Y L + A+DV G+++ + + + VLDENDN
Sbjct: 243 AKSLVINGDDESGVWLVTNRPLDREERAHYDLSVEASDVDGLDRTVSKIQITVLDENDNR 302
Query: 108 PVFSQKVYRF-IVGDLKSSLNSNVS-HWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVI 165
P+F Y+F I G +S+ SN S +++F+ +G V ATDADGDK+AY+L PSN+V+I
Sbjct: 303 PIFKSLDYKFAIAGQKSASMESNSSVTYQRFAIMGKVEATDADGDKIAYRLKSPSNVVII 362
Query: 166 VPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNS--PVLQDEQLLQ 223
VPQTGE++L G+P S+++ E V AHDL+ PS + +PA+V L+F + PV Q L+
Sbjct: 363 VPQTGEIMLAGEPTSNELLIE--VIAHDLRYPSLVSAKPAKVLLEFLAAEPVSFIMQHLE 420
Query: 224 MIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENP 283
D + + HR EKRRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD+NP
Sbjct: 421 HDDINNHSHHR-EKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNP 479
Query: 284 WITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
W+TV+ NG VRVKK+WD+EELGPEKTIDFWV I N N G
Sbjct: 480 WVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAG 520
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 30/143 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L + A+D
Sbjct: 1447 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRRRYELRLAASD-- 1491
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ + T V + V D NDN PVF + YR + + N+ + V+ATD
Sbjct: 1492 NLKENYTTVIIHVKDVNDNPPVFERPTYR---TQITEEDDRNLP-----KRVLQVTATDG 1543
Query: 148 DGDKVAYKLAVPSNLVVIVPQTG 170
D D+ P N+V + G
Sbjct: 1544 DKDR-------PQNIVYFLTGQG 1559
>gi|24584873|ref|NP_724071.1| Cadherin-N, isoform D [Drosophila melanogaster]
gi|13124002|sp|O15943.2|CADN_DROME RecName: Full=Neural-cadherin; AltName: Full=Cadherin-N;
Short=dN-cadherin; Flags: Precursor
gi|7298411|gb|AAF53635.1| Cadherin-N, isoform D [Drosophila melanogaster]
Length = 3097
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/341 (49%), Positives = 232/341 (68%), Gaps = 21/341 (6%)
Query: 2 ENSKSGTGVKGLPILVASSHK------HPHQLVRYSITQGNDNHTFALKNPTTHE-IRNS 54
EN +GT V+G+P++ A S + VRY+I GN + FAL+ ++ I+ S
Sbjct: 183 ENQPAGTRVRGVPLMQAFSGSILDEELATPKKVRYTIIDGNVDDAFALQERKANKNIQIS 242
Query: 55 TES-------KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNS 107
+S +SGV LVT+ +DREE A Y L + A+DV G+++ + + + VLDENDN
Sbjct: 243 AKSLVINGDDESGVWLVTNRPLDREERAHYDLSVEASDVDGLDRTVSKIQITVLDENDNR 302
Query: 108 PVFSQKVYRF-IVGDLKSSLNSNVS-HWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVI 165
P+F Y+F I G +S+ SN S +++F+ +G V ATDADGDK+AY+L PSN+V+I
Sbjct: 303 PIFKSLDYKFAIAGQKSASMESNSSVTYQRFAIMGKVEATDADGDKIAYRLKSPSNVVII 362
Query: 166 VPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNS--PVLQDEQLLQ 223
VPQTGE++L G+P S+++ E V AHDL+ PS + +PA+V L+F + PV Q L+
Sbjct: 363 VPQTGEIMLAGEPTSNELLIE--VIAHDLRYPSLVSAKPAKVLLEFLAAEPVSFIMQHLE 420
Query: 224 MIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENP 283
D + + HR EKRRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD+NP
Sbjct: 421 HDDINNHSHHR-EKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNP 479
Query: 284 WITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
W+TV+ NG VRVKK+WD+EELGPEKTIDFWV I N N G
Sbjct: 480 WVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAG 520
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 30/143 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L + A+D
Sbjct: 1447 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRRRYELRLAASD-- 1491
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ + T V + V D NDN PVF + YR + + N+ + V+ATD
Sbjct: 1492 NLKENYTTVIIHVKDVNDNPPVFERPTYR---TQITEEDDRNLP-----KRVLQVTATDG 1543
Query: 148 DGDKVAYKLAVPSNLVVIVPQTG 170
D D+ P N+V + G
Sbjct: 1544 DKDR-------PQNIVYFLTGQG 1559
>gi|2381492|dbj|BAA22151.1| DN-cadherin [Drosophila melanogaster]
Length = 3097
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/341 (49%), Positives = 232/341 (68%), Gaps = 21/341 (6%)
Query: 2 ENSKSGTGVKGLPILVASSHK------HPHQLVRYSITQGNDNHTFALKNPTTHE-IRNS 54
EN +GT V+G+P++ A S + VRY+I GN + FAL+ ++ I+ S
Sbjct: 183 ENQPAGTRVRGVPLMQAFSGSILDEELATPKKVRYTIIDGNVDDAFALQERKANKNIQIS 242
Query: 55 TES-------KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNS 107
+S +SGV LVT+ +DREE A Y L + A+DV G+++ + + + VLDENDN
Sbjct: 243 AKSLVINGDDESGVWLVTNRPLDREERAHYDLSVEASDVDGLDRTVSKIQITVLDENDNR 302
Query: 108 PVFSQKVYRF-IVGDLKSSLNSNVS-HWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVI 165
P+F Y+F I G +S+ SN S +++F+ +G V ATDADGDK+AY+L PSN+V+I
Sbjct: 303 PIFKSLDYKFAIAGQKSASMESNSSVTYQRFAIMGKVEATDADGDKIAYRLKSPSNVVII 362
Query: 166 VPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNS--PVLQDEQLLQ 223
VPQTGE++L G+P S+++ E V AHDL+ PS + +PA+V L+F + PV Q L+
Sbjct: 363 VPQTGEIMLAGEPTSNELLIE--VIAHDLRYPSLVSAKPAKVLLEFLAAEPVSFIMQHLE 420
Query: 224 MIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENP 283
D + + HR EKRRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD+NP
Sbjct: 421 HDDINNHSHHR-EKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNP 479
Query: 284 WITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
W+TV+ NG VRVKK+WD+EELGPEKTIDFWV I N N G
Sbjct: 480 WVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAG 520
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 30/143 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L + A+D
Sbjct: 1447 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRRRYELRLAASD-- 1491
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ + T V + V D NDN PVF + YR + + N+ + V+ATD
Sbjct: 1492 NLKENYTTVIIHVKDVNDNPPVFERPTYR---TQITEEDDRNLP-----KRVLQVTATDG 1543
Query: 148 DGDKVAYKLAVPSNLVVIVPQTG 170
D D+ P N+V + G
Sbjct: 1544 DKDR-------PQNIVYFLTGQG 1559
>gi|24584881|ref|NP_724075.1| Cadherin-N, isoform E [Drosophila melanogaster]
gi|22946729|gb|AAN10998.1| Cadherin-N, isoform E [Drosophila melanogaster]
Length = 3097
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/341 (49%), Positives = 232/341 (68%), Gaps = 21/341 (6%)
Query: 2 ENSKSGTGVKGLPILVASSHK------HPHQLVRYSITQGNDNHTFALKNPTTHE-IRNS 54
EN +GT V+G+P++ A S + VRY+I GN + FAL+ ++ I+ S
Sbjct: 183 ENQPAGTRVRGVPLMQAFSGSILDEELATPKKVRYTIIDGNVDDAFALQERKANKNIQIS 242
Query: 55 TES-------KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNS 107
+S +SGV LVT+ +DREE A Y L + A+DV G+++ + + + VLDENDN
Sbjct: 243 AKSLVINGDDESGVWLVTNRPLDREERAHYDLSVEASDVDGLDRTVSKIQITVLDENDNR 302
Query: 108 PVFSQKVYRF-IVGDLKSSLNSNVS-HWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVI 165
P+F Y+F I G +S+ SN S +++F+ +G V ATDADGDK+AY+L PSN+V+I
Sbjct: 303 PIFKSLDYKFAIAGQKSASMESNSSVTYQRFAIMGKVEATDADGDKIAYRLKSPSNVVII 362
Query: 166 VPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNS--PVLQDEQLLQ 223
VPQTGE++L G+P S+++ E V AHDL+ PS + +PA+V L+F + PV Q L+
Sbjct: 363 VPQTGEIMLAGEPTSNELLIE--VIAHDLRYPSLVSAKPAKVLLEFLAAEPVSFIMQHLE 420
Query: 224 MIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENP 283
D + + HR EKRRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD+NP
Sbjct: 421 HDDINNHSHHR-EKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNP 479
Query: 284 WITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
W+TV+ NG VRVKK+WD+EELGPEKTIDFWV I N N G
Sbjct: 480 WVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAG 520
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 30/143 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L + A+D
Sbjct: 1447 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRRRYELRLAASD-- 1491
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ + T V + V D NDN PVF + YR + + N+ + V+ATD
Sbjct: 1492 NLKENYTTVIIHVKDVNDNPPVFERPTYR---TQITEEDDRNLP-----KRVLQVTATDG 1543
Query: 148 DGDKVAYKLAVPSNLVVIVPQTG 170
D D+ P N+V + G
Sbjct: 1544 DKDR-------PQNIVYFLTGQG 1559
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 37/141 (26%)
Query: 78 SLVITATD-----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSH 132
S+ + ATD ++G+ TV++ D NDN P+F ++ Y V +
Sbjct: 1045 SVTVKATDQGDPSLEGV----CSFTVEITDVNDNPPLFDRQKY--------------VEN 1086
Query: 133 WKKFSSIGS----VSATDADGDK---VAYKLAVPSN-----LVVIVPQTGELLLTGDPPS 180
K+ +SIG+ VSA+D D D + Y L P N I ++G ++L P
Sbjct: 1087 VKQDASIGTNILRVSASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWIVLK--KPL 1144
Query: 181 DDVEYELTVEAHDLQSPSRYA 201
D Y L V A D +P+ A
Sbjct: 1145 DRDRYRLRVSASDKGTPASAA 1165
>gi|78706950|ref|NP_001027280.1| Cadherin-N, isoform I [Drosophila melanogaster]
gi|72151392|gb|AAZ66474.1| Cadherin-N, isoform I [Drosophila melanogaster]
Length = 3100
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/341 (49%), Positives = 232/341 (68%), Gaps = 21/341 (6%)
Query: 2 ENSKSGTGVKGLPILVASSHK------HPHQLVRYSITQGNDNHTFALKNPTTHE-IRNS 54
EN +GT V+G+P++ A S + VRY+I GN + FAL+ ++ I+ S
Sbjct: 183 ENQPAGTRVRGVPLMQAFSGSILDEELATPKKVRYTIIDGNVDDAFALQERKANKNIQIS 242
Query: 55 TES-------KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNS 107
+S +SGV LVT+ +DREE A Y L + A+DV G+++ + + + VLDENDN
Sbjct: 243 AKSLVINGDDESGVWLVTNRPLDREERAHYDLSVEASDVDGLDRTVSKIQITVLDENDNR 302
Query: 108 PVFSQKVYRF-IVGDLKSSLNSNVS-HWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVI 165
P+F Y+F I G +S+ SN S +++F+ +G V ATDADGDK+AY+L PSN+V+I
Sbjct: 303 PIFKSLDYKFAIAGQKSASMESNSSVTYQRFAIMGKVEATDADGDKIAYRLKSPSNVVII 362
Query: 166 VPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNS--PVLQDEQLLQ 223
VPQTGE++L G+P S+++ E V AHDL+ PS + +PA+V L+F + PV Q L+
Sbjct: 363 VPQTGEIMLAGEPTSNELLIE--VIAHDLRYPSLVSAKPAKVLLEFLAAEPVSFIMQHLE 420
Query: 224 MIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENP 283
D + + HR EKRRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD+NP
Sbjct: 421 HDDINNHSHHR-EKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNP 479
Query: 284 WITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
W+TV+ NG VRVKK+WD+EELGPEKTIDFWV I N N G
Sbjct: 480 WVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAG 520
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L + A+D
Sbjct: 1451 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRRRYELKLVASD-- 1495
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+N+ +T + ++V D ND P F Q Y + +L+ +++ +I V+ATD
Sbjct: 1496 SLNENQTTIVINVRDVNDLPPQFPQTSY-------ERTLDEGMTNTP--FTIMQVTATDG 1546
Query: 148 DGDKVAYKLAVPSNLVVIVPQTG 170
D D+ P N+V + G
Sbjct: 1547 DKDR-------PQNIVYFLTGQG 1562
>gi|24584877|ref|NP_724073.1| Cadherin-N, isoform A [Drosophila melanogaster]
gi|22946727|gb|AAN10996.1| Cadherin-N, isoform A [Drosophila melanogaster]
Length = 3096
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/341 (49%), Positives = 232/341 (68%), Gaps = 21/341 (6%)
Query: 2 ENSKSGTGVKGLPILVASSHK------HPHQLVRYSITQGNDNHTFALKNPTTHE-IRNS 54
EN +GT V+G+P++ A S + VRY+I GN + FAL+ ++ I+ S
Sbjct: 183 ENQPAGTRVRGVPLMQAFSGSILDEELATPKKVRYTIIDGNVDDAFALQERKANKNIQIS 242
Query: 55 TES-------KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNS 107
+S +SGV LVT+ +DREE A Y L + A+DV G+++ + + + VLDENDN
Sbjct: 243 AKSLVINGDDESGVWLVTNRPLDREERAHYDLSVEASDVDGLDRTVSKIQITVLDENDNR 302
Query: 108 PVFSQKVYRF-IVGDLKSSLNSNVS-HWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVI 165
P+F Y+F I G +S+ SN S +++F+ +G V ATDADGDK+AY+L PSN+V+I
Sbjct: 303 PIFKSLDYKFAIAGQKSASMESNSSVTYQRFAIMGKVEATDADGDKIAYRLKSPSNVVII 362
Query: 166 VPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNS--PVLQDEQLLQ 223
VPQTGE++L G+P S+++ E V AHDL+ PS + +PA+V L+F + PV Q L+
Sbjct: 363 VPQTGEIMLAGEPTSNELLIE--VIAHDLRYPSLVSAKPAKVLLEFLAAEPVSFIMQHLE 420
Query: 224 MIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENP 283
D + + HR EKRRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD+NP
Sbjct: 421 HDDINNHSHHR-EKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNP 479
Query: 284 WITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
W+TV+ NG VRVKK+WD+EELGPEKTIDFWV I N N G
Sbjct: 480 WVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAG 520
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L + A+D
Sbjct: 1447 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRRRYELKLVASD-- 1491
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+N+ +T + ++V D ND P F Q Y + +L+ +++ +I V+ATD
Sbjct: 1492 SLNENQTTIVINVRDVNDLPPQFPQTSY-------ERTLDEGMTNTP--FTIMQVTATDG 1542
Query: 148 DGDKVAYKLAVPSNLVVIVPQTG 170
D D+ P N+V + G
Sbjct: 1543 DKDR-------PQNIVYFLTGQG 1558
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 37/141 (26%)
Query: 78 SLVITATD-----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSH 132
S+ + ATD ++G+ TV++ D NDN P+F ++ Y V +
Sbjct: 1045 SVTVKATDQGDPSLEGV----CSFTVEITDVNDNPPLFDRQKY--------------VEN 1086
Query: 133 WKKFSSIGS----VSATDADGDK---VAYKLAVPSN-----LVVIVPQTGELLLTGDPPS 180
K+ +SIG+ VSA+D D D + Y L P N I ++G ++L P
Sbjct: 1087 VKQDASIGTNILRVSASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWIVLK--KPL 1144
Query: 181 DDVEYELTVEAHDLQSPSRYA 201
D Y L V A D +P+ A
Sbjct: 1145 DRDRYRLRVSASDKGTPASAA 1165
>gi|78706948|ref|NP_001027279.1| Cadherin-N, isoform J [Drosophila melanogaster]
gi|72151391|gb|AAZ66473.1| Cadherin-N, isoform J [Drosophila melanogaster]
Length = 3099
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/341 (49%), Positives = 232/341 (68%), Gaps = 21/341 (6%)
Query: 2 ENSKSGTGVKGLPILVASSHK------HPHQLVRYSITQGNDNHTFALKNPTTHE-IRNS 54
EN +GT V+G+P++ A S + VRY+I GN + FAL+ ++ I+ S
Sbjct: 183 ENQPAGTRVRGVPLMQAFSGSILDEELATPKKVRYTIIDGNVDDAFALQERKANKNIQIS 242
Query: 55 TES-------KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNS 107
+S +SGV LVT+ +DREE A Y L + A+DV G+++ + + + VLDENDN
Sbjct: 243 AKSLVINGDDESGVWLVTNRPLDREERAHYDLSVEASDVDGLDRTVSKIQITVLDENDNR 302
Query: 108 PVFSQKVYRF-IVGDLKSSLNSNVS-HWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVI 165
P+F Y+F I G +S+ SN S +++F+ +G V ATDADGDK+AY+L PSN+V+I
Sbjct: 303 PIFKSLDYKFAIAGQKSASMESNSSVTYQRFAIMGKVEATDADGDKIAYRLKSPSNVVII 362
Query: 166 VPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNS--PVLQDEQLLQ 223
VPQTGE++L G+P S+++ E V AHDL+ PS + +PA+V L+F + PV Q L+
Sbjct: 363 VPQTGEIMLAGEPTSNELLIE--VIAHDLRYPSLVSAKPAKVLLEFLAAEPVSFIMQHLE 420
Query: 224 MIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENP 283
D + + HR EKRRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD+NP
Sbjct: 421 HDDINNHSHHR-EKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNP 479
Query: 284 WITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
W+TV+ NG VRVKK+WD+EELGPEKTIDFWV I N N G
Sbjct: 480 WVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAG 520
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L + A+D
Sbjct: 1451 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRRRYELKLVASD-- 1495
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+N+ +T + ++V D ND P F Q Y + +L+ +++ +I V+ATD
Sbjct: 1496 SLNENQTTIVINVRDVNDLPPQFPQTSY-------ERTLDEGMTNTP--FTIMQVTATDG 1546
Query: 148 DGDKVAYKLAVPSNLVVIVPQTG 170
D D+ P N+V + G
Sbjct: 1547 DKDR-------PQNIVYFLTGQG 1562
>gi|78706944|ref|NP_001027277.1| Cadherin-N, isoform L [Drosophila melanogaster]
gi|72151394|gb|AAZ66476.1| Cadherin-N, isoform L [Drosophila melanogaster]
Length = 3101
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/341 (49%), Positives = 232/341 (68%), Gaps = 21/341 (6%)
Query: 2 ENSKSGTGVKGLPILVASSHK------HPHQLVRYSITQGNDNHTFALKNPTTHE-IRNS 54
EN +GT V+G+P++ A S + VRY+I GN + FAL+ ++ I+ S
Sbjct: 183 ENQPAGTRVRGVPLMQAFSGSILDEELATPKKVRYTIIDGNVDDAFALQERKANKNIQIS 242
Query: 55 TES-------KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNS 107
+S +SGV LVT+ +DREE A Y L + A+DV G+++ + + + VLDENDN
Sbjct: 243 AKSLVINGDDESGVWLVTNRPLDREERAHYDLSVEASDVDGLDRTVSKIQITVLDENDNR 302
Query: 108 PVFSQKVYRF-IVGDLKSSLNSNVS-HWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVI 165
P+F Y+F I G +S+ SN S +++F+ +G V ATDADGDK+AY+L PSN+V+I
Sbjct: 303 PIFKSLDYKFAIAGQKSASMESNSSVTYQRFAIMGKVEATDADGDKIAYRLKSPSNVVII 362
Query: 166 VPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNS--PVLQDEQLLQ 223
VPQTGE++L G+P S+++ E V AHDL+ PS + +PA+V L+F + PV Q L+
Sbjct: 363 VPQTGEIMLAGEPTSNELLIE--VIAHDLRYPSLVSAKPAKVLLEFLAAEPVSFIMQHLE 420
Query: 224 MIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENP 283
D + + HR EKRRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD+NP
Sbjct: 421 HDDINNHSHHR-EKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNP 479
Query: 284 WITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
W+TV+ NG VRVKK+WD+EELGPEKTIDFWV I N N G
Sbjct: 480 WVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAG 520
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 30/143 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L + A+D
Sbjct: 1451 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRRRYELRLAASD-- 1495
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ + T V + V D NDN PVF + YR + + N+ + V+ATD
Sbjct: 1496 NLKENYTTVIIHVKDVNDNPPVFERPTYR---TQITEEDDRNLP-----KRVLQVTATDG 1547
Query: 148 DGDKVAYKLAVPSNLVVIVPQTG 170
D D+ P N+V + G
Sbjct: 1548 DKDR-------PQNIVYFLTGQG 1563
>gi|24584879|ref|NP_724074.1| Cadherin-N, isoform G [Drosophila melanogaster]
gi|22946728|gb|AAN10997.1| Cadherin-N, isoform G [Drosophila melanogaster]
Length = 3096
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/341 (49%), Positives = 232/341 (68%), Gaps = 21/341 (6%)
Query: 2 ENSKSGTGVKGLPILVASSHK------HPHQLVRYSITQGNDNHTFALKNPTTHE-IRNS 54
EN +GT V+G+P++ A S + VRY+I GN + FAL+ ++ I+ S
Sbjct: 183 ENQPAGTRVRGVPLMQAFSGSILDEELATPKKVRYTIIDGNVDDAFALQERKANKNIQIS 242
Query: 55 TES-------KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNS 107
+S +SGV LVT+ +DREE A Y L + A+DV G+++ + + + VLDENDN
Sbjct: 243 AKSLVINGDDESGVWLVTNRPLDREERAHYDLSVEASDVDGLDRTVSKIQITVLDENDNR 302
Query: 108 PVFSQKVYRF-IVGDLKSSLNSNVS-HWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVI 165
P+F Y+F I G +S+ SN S +++F+ +G V ATDADGDK+AY+L PSN+V+I
Sbjct: 303 PIFKSLDYKFAIAGQKSASMESNSSVTYQRFAIMGKVEATDADGDKIAYRLKSPSNVVII 362
Query: 166 VPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNS--PVLQDEQLLQ 223
VPQTGE++L G+P S+++ E V AHDL+ PS + +PA+V L+F + PV Q L+
Sbjct: 363 VPQTGEIMLAGEPTSNELLIE--VIAHDLRYPSLVSAKPAKVLLEFLAAEPVSFIMQHLE 420
Query: 224 MIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENP 283
D + + HR EKRRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD+NP
Sbjct: 421 HDDINNHSHHR-EKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNP 479
Query: 284 WITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
W+TV+ NG VRVKK+WD+EELGPEKTIDFWV I N N G
Sbjct: 480 WVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAG 520
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 30/143 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L + A+D
Sbjct: 1447 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRRRYELRLAASD-- 1491
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ + T V + V D NDN PVF + YR + + N+ + V+ATD
Sbjct: 1492 NLKENYTTVIIHVKDVNDNPPVFERPTYR---TQITEEDDRNLP-----KRVLQVTATDG 1543
Query: 148 DGDKVAYKLAVPSNLVVIVPQTG 170
D D+ P N+V + G
Sbjct: 1544 DKDR-------PQNIVYFLTGQG 1559
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 37/141 (26%)
Query: 78 SLVITATD-----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSH 132
S+ + ATD ++G+ TV++ D NDN P+F ++ Y V +
Sbjct: 1045 SVTVKATDQGDPSLEGV----CSFTVEITDVNDNPPLFDRQKY--------------VEN 1086
Query: 133 WKKFSSIGS----VSATDADGDK---VAYKLAVPSN-----LVVIVPQTGELLLTGDPPS 180
K+ +SIG+ VSA+D D D + Y L P N I ++G ++L P
Sbjct: 1087 VKQDASIGTNILRVSASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWIVLK--KPL 1144
Query: 181 DDVEYELTVEAHDLQSPSRYA 201
D Y L V A D +P+ A
Sbjct: 1145 DRDRYRLRVSASDKGTPASAA 1165
>gi|78706946|ref|NP_001027278.1| Cadherin-N, isoform K [Drosophila melanogaster]
gi|72151393|gb|AAZ66475.1| Cadherin-N, isoform K [Drosophila melanogaster]
Length = 3100
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/341 (49%), Positives = 232/341 (68%), Gaps = 21/341 (6%)
Query: 2 ENSKSGTGVKGLPILVASSHK------HPHQLVRYSITQGNDNHTFALKNPTTHE-IRNS 54
EN +GT V+G+P++ A S + VRY+I GN + FAL+ ++ I+ S
Sbjct: 183 ENQPAGTRVRGVPLMQAFSGSILDEELATPKKVRYTIIDGNVDDAFALQERKANKNIQIS 242
Query: 55 TES-------KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNS 107
+S +SGV LVT+ +DREE A Y L + A+DV G+++ + + + VLDENDN
Sbjct: 243 AKSLVINGDDESGVWLVTNRPLDREERAHYDLSVEASDVDGLDRTVSKIQITVLDENDNR 302
Query: 108 PVFSQKVYRF-IVGDLKSSLNSNVS-HWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVI 165
P+F Y+F I G +S+ SN S +++F+ +G V ATDADGDK+AY+L PSN+V+I
Sbjct: 303 PIFKSLDYKFAIAGQKSASMESNSSVTYQRFAIMGKVEATDADGDKIAYRLKSPSNVVII 362
Query: 166 VPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNS--PVLQDEQLLQ 223
VPQTGE++L G+P S+++ E V AHDL+ PS + +PA+V L+F + PV Q L+
Sbjct: 363 VPQTGEIMLAGEPTSNELLIE--VIAHDLRYPSLVSAKPAKVLLEFLAAEPVSFIMQHLE 420
Query: 224 MIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENP 283
D + + HR EKRRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD+NP
Sbjct: 421 HDDINNHSHHR-EKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNP 479
Query: 284 WITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
W+TV+ NG VRVKK+WD+EELGPEKTIDFWV I N N G
Sbjct: 480 WVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAG 520
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 30/143 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L + A+D
Sbjct: 1451 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRRRYELRLAASD-- 1495
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ + T V + V D NDN PVF + YR + + N+ + V+ATD
Sbjct: 1496 NLKENYTTVIIHVKDVNDNPPVFERPTYR---TQITEEDDRNLP-----KRVLQVTATDG 1547
Query: 148 DGDKVAYKLAVPSNLVVIVPQTG 170
D D+ P N+V + G
Sbjct: 1548 DKDR-------PQNIVYFLTGQG 1563
>gi|24584867|ref|NP_724068.1| Cadherin-N, isoform H [Drosophila melanogaster]
gi|22946723|gb|AAN10992.1| Cadherin-N, isoform H [Drosophila melanogaster]
Length = 3095
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/341 (49%), Positives = 232/341 (68%), Gaps = 21/341 (6%)
Query: 2 ENSKSGTGVKGLPILVASSHK------HPHQLVRYSITQGNDNHTFALKNPTTHE-IRNS 54
EN +GT V+G+P++ A S + VRY+I GN + FAL+ ++ I+ S
Sbjct: 183 ENQPAGTRVRGVPLMQAFSGSILDEELATPKKVRYTIIDGNVDDAFALQERKANKNIQIS 242
Query: 55 TES-------KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNS 107
+S +SGV LVT+ +DREE A Y L + A+DV G+++ + + + VLDENDN
Sbjct: 243 AKSLVINGDDESGVWLVTNRPLDREERAHYDLSVEASDVDGLDRTVSKIQITVLDENDNR 302
Query: 108 PVFSQKVYRF-IVGDLKSSLNSNVS-HWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVI 165
P+F Y+F I G +S+ SN S +++F+ +G V ATDADGDK+AY+L PSN+V+I
Sbjct: 303 PIFKSLDYKFAIAGQKSASMESNSSVTYQRFAIMGKVEATDADGDKIAYRLKSPSNVVII 362
Query: 166 VPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNS--PVLQDEQLLQ 223
VPQTGE++L G+P S+++ E V AHDL+ PS + +PA+V L+F + PV Q L+
Sbjct: 363 VPQTGEIMLAGEPTSNELLIE--VIAHDLRYPSLVSAKPAKVLLEFLAAEPVSFIMQHLE 420
Query: 224 MIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENP 283
D + + HR EKRRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD+NP
Sbjct: 421 HDDINNHSHHR-EKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNP 479
Query: 284 WITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
W+TV+ NG VRVKK+WD+EELGPEKTIDFWV I N N G
Sbjct: 480 WVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAG 520
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L + A+D
Sbjct: 1447 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRRRYELKLVASD-- 1491
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+N+ +T + ++V D ND P F Q Y + +L+ +++ +I V+ATD
Sbjct: 1492 SLNENQTTIVINVRDVNDLPPQFPQTSY-------ERTLDEGMTNTP--FTIMQVTATDG 1542
Query: 148 DGDKVAYKLAVPSNLVVIVPQTG 170
D D+ P N+V + G
Sbjct: 1543 DKDR-------PQNIVYFLTGQG 1558
>gi|24584869|ref|NP_724069.1| Cadherin-N, isoform B [Drosophila melanogaster]
gi|22946724|gb|AAN10993.1| Cadherin-N, isoform B [Drosophila melanogaster]
Length = 3096
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/341 (49%), Positives = 232/341 (68%), Gaps = 21/341 (6%)
Query: 2 ENSKSGTGVKGLPILVASSHK------HPHQLVRYSITQGNDNHTFALKNPTTHE-IRNS 54
EN +GT V+G+P++ A S + VRY+I GN + FAL+ ++ I+ S
Sbjct: 183 ENQPAGTRVRGVPLMQAFSGSILDEELATPKKVRYTIIDGNVDDAFALQERKANKNIQIS 242
Query: 55 TES-------KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNS 107
+S +SGV LVT+ +DREE A Y L + A+DV G+++ + + + VLDENDN
Sbjct: 243 AKSLVINGDDESGVWLVTNRPLDREERAHYDLSVEASDVDGLDRTVSKIQITVLDENDNR 302
Query: 108 PVFSQKVYRF-IVGDLKSSLNSNVS-HWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVI 165
P+F Y+F I G +S+ SN S +++F+ +G V ATDADGDK+AY+L PSN+V+I
Sbjct: 303 PIFKSLDYKFAIAGQKSASMESNSSVTYQRFAIMGKVEATDADGDKIAYRLKSPSNVVII 362
Query: 166 VPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNS--PVLQDEQLLQ 223
VPQTGE++L G+P S+++ E V AHDL+ PS + +PA+V L+F + PV Q L+
Sbjct: 363 VPQTGEIMLAGEPTSNELLIE--VIAHDLRYPSLVSAKPAKVLLEFLAAEPVSFIMQHLE 420
Query: 224 MIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENP 283
D + + HR EKRRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD+NP
Sbjct: 421 HDDINNHSHHR-EKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNP 479
Query: 284 WITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
W+TV+ NG VRVKK+WD+EELGPEKTIDFWV I N N G
Sbjct: 480 WVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAG 520
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L + A+D
Sbjct: 1447 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRRRYELKLVASD-- 1491
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+N+ +T + ++V D ND P F Q Y + +L+ +++ +I V+ATD
Sbjct: 1492 SLNENQTTIVINVRDVNDLPPQFPQTSY-------ERTLDEGMTNTP--FTIMQVTATDG 1542
Query: 148 DGDKVAYKLAVPSNLVVIVPQTG 170
D D+ P N+V + G
Sbjct: 1543 DKDR-------PQNIVYFLTGQG 1558
>gi|24584875|ref|NP_724072.1| Cadherin-N, isoform C [Drosophila melanogaster]
gi|22946726|gb|AAN10995.1| Cadherin-N, isoform C [Drosophila melanogaster]
Length = 3095
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 169/341 (49%), Positives = 232/341 (68%), Gaps = 21/341 (6%)
Query: 2 ENSKSGTGVKGLPILVASSHK------HPHQLVRYSITQGNDNHTFALKNPTTHE-IRNS 54
EN +GT V+G+P++ A S + VRY+I GN + FAL+ ++ I+ S
Sbjct: 183 ENQPAGTRVRGVPLMQAFSGSILDEELATPKKVRYTIIDGNVDDAFALQERKANKNIQIS 242
Query: 55 TES-------KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNS 107
+S +SGV LVT+ +DREE A Y L + A+DV G+++ + + + VLDENDN
Sbjct: 243 AKSLVINGDDESGVWLVTNRPLDREERAHYDLSVEASDVDGLDRTVSKIQITVLDENDNR 302
Query: 108 PVFSQKVYRF-IVGDLKSSLNSNVS-HWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVI 165
P+F Y+F I G +S+ SN S +++F+ +G V ATDADGDK+AY+L PSN+V+I
Sbjct: 303 PIFKSLDYKFAIAGQKSASMESNSSVTYQRFAIMGKVEATDADGDKIAYRLKSPSNVVII 362
Query: 166 VPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNS--PVLQDEQLLQ 223
VPQTGE++L G+P S+++ E V AHDL+ PS + +PA+V L+F + PV Q L+
Sbjct: 363 VPQTGEIMLAGEPTSNELLIE--VIAHDLRYPSLVSAKPAKVLLEFLAAEPVSFIMQHLE 420
Query: 224 MIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENP 283
D + + HR EKRRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD+NP
Sbjct: 421 HDDINNHSHHR-EKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNP 479
Query: 284 WITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
W+TV+ NG VRVKK+WD+EELGPEKTIDFWV I N N G
Sbjct: 480 WVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAG 520
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 31/143 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L + A+D
Sbjct: 1447 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRRRYELKLVASD-- 1491
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+N+ +T + ++V D ND P F Q Y + +L+ +++ +I V+ATD
Sbjct: 1492 SLNENQTTIVINVRDVNDLPPQFPQTSY-------ERTLDEGMTNTP--FTIMQVTATDG 1542
Query: 148 DGDKVAYKLAVPSNLVVIVPQTG 170
D D+ P N+V + G
Sbjct: 1543 DKDR-------PQNIVYFLTGQG 1558
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 37/141 (26%)
Query: 78 SLVITATD-----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSH 132
S+ + ATD ++G+ TV++ D NDN P+F ++ Y V +
Sbjct: 1045 SVTVKATDQGDPSLEGV----CSFTVEITDVNDNPPLFDRQKY--------------VEN 1086
Query: 133 WKKFSSIGS----VSATDADGDK---VAYKLAVPSN-----LVVIVPQTGELLLTGDPPS 180
K+ +SIG+ VSA+D D D + Y L P N I ++G ++L P
Sbjct: 1087 VKQDASIGTNILRVSASDEDADNNGAIVYSLTAPFNPNDLEYFEIQAESGWIVLK--KPL 1144
Query: 181 DDVEYELTVEAHDLQSPSRYA 201
D Y L V A D +P+ A
Sbjct: 1145 DRDRYRLRVSASDKGTPASAA 1165
>gi|195035601|ref|XP_001989264.1| GH10146 [Drosophila grimshawi]
gi|193905264|gb|EDW04131.1| GH10146 [Drosophila grimshawi]
Length = 2305
Score = 301 bits (771), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 167/340 (49%), Positives = 229/340 (67%), Gaps = 23/340 (6%)
Query: 2 ENSKSGTGVKGLPILVASSHK-------HPHQLVRYSITQGNDNHTFALKNPTTHE-IRN 53
EN +GT V+G+P++ A S P + VRY+I GN N FAL+ ++ +++
Sbjct: 215 ENHPAGTRVRGVPLMQAFSGSILDEELAKPKK-VRYTIIDGNVNDAFALQERRANQNVQS 273
Query: 54 STES-------KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDN 106
+ +S +SGV LVT+ +DREE A Y L + A+DV G++K + + + VLDENDN
Sbjct: 274 NAKSLTIEGDDESGVWLVTNRPLDREERAHYDLSVEASDVGGLDKTVSKIQITVLDENDN 333
Query: 107 SPVFSQKVYRFIVGDLKSS--LNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVV 164
PVF + Y+F + KS +N W++F+ +G V ATDADGDK+AY+L PSN+V+
Sbjct: 334 RPVFKSQDYKFAIAGKKSQNMEGNNSISWQRFAILGKVEATDADGDKIAYRLKSPSNVVI 393
Query: 165 IVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSP--VLQDEQLL 222
IVPQTGEL+L G+P + E L V AHDL+ PS + +PA+V L+F +P V Q L
Sbjct: 394 IVPQTGELMLAGEPSTS--ELLLEVIAHDLRYPSLLSAQPAKVLLEFLAPEPVSFIMQHL 451
Query: 223 QMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDEN 282
+ + + + HR EKRRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD+N
Sbjct: 452 EHDEVNAHSHHR-EKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDN 510
Query: 283 PWITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATN 322
PW+TV+ NG VRVKK+WD+EELGP+KTIDFWV I N N
Sbjct: 511 PWVTVETNGAVRVKKKWDYEELGPDKTIDFWVIITNMGHN 550
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 15/89 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L + A+D
Sbjct: 602 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRRRYELRLAASD-- 646
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYR 116
+ + T V + V D NDN PVF + YR
Sbjct: 647 NLKENYTTVIIHVKDVNDNPPVFERPTYR 675
>gi|195117884|ref|XP_002003475.1| GI22312 [Drosophila mojavensis]
gi|193914050|gb|EDW12917.1| GI22312 [Drosophila mojavensis]
Length = 3328
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 167/342 (48%), Positives = 229/342 (66%), Gaps = 23/342 (6%)
Query: 2 ENSKSGTGVKGLPILVASSHK-------HPHQLVRYSITQGNDNHTFALKNPTTHE---- 50
EN +GT V+G+P++ A S P + VRY+I GN++ FAL+ ++
Sbjct: 222 ENHPAGTRVRGVPLMQAFSGSIVDEELAKPKK-VRYTIIDGNEDDAFALQERRANQNVQV 280
Query: 51 ----IRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDN 106
+ + +SGV LVT+ +DRE+ A Y L + A+DV+G++K + + + VLDENDN
Sbjct: 281 NAKSLTIEGDDESGVWLVTNRPLDREQRAHYDLSVEASDVEGLDKTVSKIQITVLDENDN 340
Query: 107 SPVFSQKVYRFIVGDLKS-SLNSNVS-HWKKFSSIGSVSATDADGDKVAYKLAVPSNLVV 164
PVF + Y+F + KS ++ SN S W +F+ +G V A DADGDK+AY+L PSN+V+
Sbjct: 341 RPVFKSQDYKFAIAGKKSQNMESNNSVTWDRFAILGKVEAVDADGDKIAYRLKSPSNVVI 400
Query: 165 IVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSP--VLQDEQLL 222
IVPQTGEL+L G+P S+ E L V AHDL+ PS + +PA+V ++F +P V Q L
Sbjct: 401 IVPQTGELMLAGEPTSN--ELLLEVIAHDLRYPSLLSAQPAKVLVEFLAPEPVSFIMQHL 458
Query: 223 QMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDEN 282
+ D +E H EKRRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD+N
Sbjct: 459 EH-DAINEHSHHREKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDN 517
Query: 283 PWITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
PW+TV+ NG VRVKK+WD+EELGP+KTIDFWV I N N G
Sbjct: 518 PWVTVETNGAVRVKKKWDYEELGPDKTIDFWVIITNMGHNAG 559
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 15/89 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L + A+D
Sbjct: 1539 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRRRYELRLAASD-- 1583
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYR 116
+ + T V + V D NDN PVF + YR
Sbjct: 1584 NLKENYTTVIIHVKDVNDNPPVFERPTYR 1612
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 37/141 (26%)
Query: 78 SLVITATD-----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSH 132
S+ + ATD ++G+ TV++ D NDN P+F ++ Y V +
Sbjct: 1084 SVTVKATDQGDPSLEGV----CSFTVEITDVNDNPPLFDRQKY--------------VEN 1125
Query: 133 WKKFSSIGS----VSATDADGDK---VAYKLAVPSN-----LVVIVPQTGELLLTGDPPS 180
K+ +SIG+ VSA+D D D + Y L+ P N I ++G ++L P
Sbjct: 1126 VKQDASIGTNILRVSASDEDADNNGAIVYSLSAPFNPNDLEYFDIQAESGWIVLKK--PL 1183
Query: 181 DDVEYELTVEAHDLQSPSRYA 201
D Y L V A D P YA
Sbjct: 1184 DRDRYRLRVRASDRGDPPSYA 1204
>gi|195579808|ref|XP_002079751.1| GD21853 [Drosophila simulans]
gi|194191760|gb|EDX05336.1| GD21853 [Drosophila simulans]
Length = 1402
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 168/341 (49%), Positives = 232/341 (68%), Gaps = 21/341 (6%)
Query: 2 ENSKSGTGVKGLPILVASSHK------HPHQLVRYSITQGNDNHTFALKNPTTHE-IRNS 54
EN +GT V+G+P++ A S + VRY+I GN + FAL+ ++ I+ S
Sbjct: 183 ENQPAGTRVRGVPLMQAFSGSILDEELATPKKVRYTIIDGNVDDAFALQERKANKNIQIS 242
Query: 55 TES-------KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNS 107
+S +SGV LVT+ +DREE A Y L + A+DV G++K + + + VLDENDN
Sbjct: 243 AKSLVINGDDESGVWLVTNRPLDREERAHYDLSVEASDVDGLDKTVSKIQITVLDENDNR 302
Query: 108 PVFSQKVYRF-IVGDLKSSLNSNVS-HWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVI 165
P+F Y+F I G +++ SN S +++F+ +G V ATDADGDK+AY+L PSN+V+I
Sbjct: 303 PIFKSLDYKFAIAGQKSANMESNSSVTYQRFAIMGKVEATDADGDKIAYRLKSPSNVVII 362
Query: 166 VPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNS--PVLQDEQLLQ 223
VPQTGE++L G+P S+++ E V AHDL+ PS + +PA+V L+F + PV Q L+
Sbjct: 363 VPQTGEIMLAGEPTSNELLIE--VIAHDLRYPSLLSAKPAKVLLEFLAAEPVSFIMQHLE 420
Query: 224 MIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENP 283
+ + + HR EKRRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD+NP
Sbjct: 421 HDEINNHSHHR-EKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNP 479
Query: 284 WITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
W+TV+ NG VRVKK+WD+EELGPEKTIDFWV I N N G
Sbjct: 480 WVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAG 520
>gi|195344744|ref|XP_002038939.1| GM17111 [Drosophila sechellia]
gi|194134069|gb|EDW55585.1| GM17111 [Drosophila sechellia]
Length = 3151
Score = 300 bits (767), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 168/341 (49%), Positives = 232/341 (68%), Gaps = 21/341 (6%)
Query: 2 ENSKSGTGVKGLPILVASSHK------HPHQLVRYSITQGNDNHTFALKNPTTHE-IRNS 54
EN +GT V+G+P++ A S + VRY+I GN + FAL+ ++ I+ S
Sbjct: 183 ENQPAGTRVRGVPLMQAFSGSILDEELATPKKVRYTIIDGNVDDAFALQERKANKNIQIS 242
Query: 55 TES-------KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNS 107
+S +SGV LVT+ +DREE A Y L + A+DV G++K + + + VLDENDN
Sbjct: 243 AKSLVINGDDESGVWLVTNRPLDREERAHYDLSVEASDVDGLDKTVSKIQITVLDENDNR 302
Query: 108 PVFSQKVYRF-IVGDLKSSLNSNVS-HWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVI 165
P+F Y+F I G +++ SN S +++F+ +G V ATDADGDK+AY+L PSN+V+I
Sbjct: 303 PIFKSLDYKFAIAGQKSANMESNSSVTYQRFAIMGKVEATDADGDKIAYRLKSPSNVVII 362
Query: 166 VPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNS--PVLQDEQLLQ 223
VPQTGE++L G+P S+++ E V AHDL+ PS + +PA+V L+F + PV Q L+
Sbjct: 363 VPQTGEIMLAGEPTSNELLIE--VIAHDLRYPSLLSAKPAKVLLEFLAAEPVSFIMQHLE 420
Query: 224 MIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENP 283
+ + + HR EKRRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD+NP
Sbjct: 421 HDEINNHSHHR-EKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNP 479
Query: 284 WITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
W+TV+ NG VRVKK+WD+EELGPEKTIDFWV I N N G
Sbjct: 480 WVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAG 520
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 15/89 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L + A+D
Sbjct: 1447 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRRRYELRLAASD-- 1491
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYR 116
+ + T V + V D NDN PVF + YR
Sbjct: 1492 NLKENYTTVIIHVKDVNDNPPVFERPTYR 1520
>gi|195436718|ref|XP_002066304.1| GK18219 [Drosophila willistoni]
gi|194162389|gb|EDW77290.1| GK18219 [Drosophila willistoni]
Length = 3304
Score = 299 bits (765), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 161/347 (46%), Positives = 229/347 (65%), Gaps = 27/347 (7%)
Query: 2 ENSKSGTGVKGLPIL------VASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNST 55
EN SGT V+G+P++ V+ + ++Y+I GN N FAL+ +++ T
Sbjct: 192 ENQPSGTRVRGVPLMQAFSGSVSEEESAKPKKIKYTIIDGNVNEAFALQERNSNQQDAKT 251
Query: 56 ------------ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDE 103
E +SGV LVT+ +DREE + Y L + A+D+ G++K + + + +LDE
Sbjct: 252 LVIDGNSNSPDNEEESGVWLVTNRPLDREERSHYDLSVEASDLDGLDKTVSKIAITILDE 311
Query: 104 NDNSPVFSQKVYRF-IVGDLKSSLNSNVSH---WKKFSSIGSVSATDADGDKVAYKLAVP 159
NDN P+F Y+F + G ++++SN S+ +++F+ +G V ATD DGDK+AY+L P
Sbjct: 312 NDNRPIFKSLDYKFALAGQKATNIDSNTSNAVTYQRFAIMGRVEATDLDGDKIAYRLKTP 371
Query: 160 SNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSP--VLQ 217
+N+V++VPQTGE++L G+P S+ E L V AHDL+ PS + +PA+V L+F +P V
Sbjct: 372 NNVVIMVPQTGEIMLAGEPTSN--EMLLEVLAHDLRYPSLLSAQPAKVLLEFLAPEPVSF 429
Query: 218 DEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFK 277
Q L+ D +E H EKRRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FK
Sbjct: 430 IMQHLEH-DEVNEHSHHREKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFK 488
Query: 278 IRDENPWITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
IRD+NPW+TV+ NG VRVKK+WD+EELGPEKTIDFWV I N N G
Sbjct: 489 IRDDNPWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAG 535
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 15/89 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L + A+D
Sbjct: 1515 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRRRYELRLAASD-- 1559
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYR 116
+ + T V + V D NDN PVF + YR
Sbjct: 1560 NLKENYTTVIIHVKDVNDNPPVFERPTYR 1588
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 85/193 (44%), Gaps = 40/193 (20%)
Query: 28 VRYSI-TQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQ---YSLVITA 83
+RY++ QG TF + PT SG++ + ++D E++ Q YSL++TA
Sbjct: 698 IRYTLKAQGQGQGTFNI-GPT-----------SGIVKLAK-ELDFEDLRQPHVYSLIVTA 744
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
T+ G +T+ V D NDN+P F Y+ D L +SI V
Sbjct: 745 TEDSGGFSTSVELTIRVTDVNDNAPKFELPDYQAHNVDEDIPLG---------TSILRVK 795
Query: 144 ATDADGD---KVAY-----KLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQ 195
ATDAD ++ Y AV SN +++ +L D +++ YE V A D
Sbjct: 796 ATDADSGANAEIEYLVSDDHFAVDSNGIIV--NNKQL----DADNNNAYYEFIVTAKDKG 849
Query: 196 SPSRYAREPAQVW 208
P++ +V+
Sbjct: 850 EPAKSGTATVRVY 862
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 37/141 (26%)
Query: 78 SLVITATD-----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSH 132
S+ + ATD ++G+ TV++ D NDN P+F ++ Y V +
Sbjct: 1060 SVTVKATDQGDPSLEGV----CSFTVEITDVNDNPPLFDRQKY--------------VEN 1101
Query: 133 WKKFSSIGS----VSATDADGDK---VAYKLAVPSN-----LVVIVPQTGELLLTGDPPS 180
K+ +SIG+ VSA+D D D + Y L+ P N I ++G ++L P
Sbjct: 1102 VKQDASIGTNILRVSASDEDADNNGAIVYSLSAPFNPNDLEYFDIQAESGWIVLK--KPL 1159
Query: 181 DDVEYELTVEAHDLQSPSRYA 201
D Y L V A D P YA
Sbjct: 1160 DRDRYRLRVRASDKGEPPSYA 1180
>gi|194758880|ref|XP_001961686.1| GF15089 [Drosophila ananassae]
gi|190615383|gb|EDV30907.1| GF15089 [Drosophila ananassae]
Length = 3097
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 168/344 (48%), Positives = 229/344 (66%), Gaps = 27/344 (7%)
Query: 2 ENSKSGTGVKGLPILVASSHK-------HPHQLVRYSITQGNDNHTFALKNPTTHEIRN- 53
ENS +GT ++G+P++ A S P + VRY+I GN FAL+ + RN
Sbjct: 183 ENSPAGTRIRGVPLMQAFSGSILEEELAKPKK-VRYTIIDGNVEDAFALQERKAN--RNV 239
Query: 54 ---------STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDEN 104
+ +SGV LVT+ +DRE+ A Y L + A+DV G++K + + + VLDEN
Sbjct: 240 QINAKSLVIDGDDESGVWLVTNRPLDREQRAHYDLSVEASDVDGLDKTVSKIQITVLDEN 299
Query: 105 DNSPVFSQKVYRF-IVGDLKSSLNSNVS-HWKKFSSIGSVSATDADGDKVAYKLAVPSNL 162
DN P+F Y+F I G +S+ SN S +++F+ +G V ATDADGDK+AY+L P+N+
Sbjct: 300 DNRPIFKSVDYKFAIAGQKAASMESNNSITYQRFAIMGKVEATDADGDKIAYRLKSPNNV 359
Query: 163 VVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSP--VLQDEQ 220
V+IVPQTGE++L G+P S+ E + V AHDL+ PS + +PA+V L+F +P V Q
Sbjct: 360 VIIVPQTGEIMLVGEPTSN--ELLIDVIAHDLRYPSLLSAQPAKVLLEFLAPEPVSFIMQ 417
Query: 221 LLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRD 280
L+ + S + HR EKRRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD
Sbjct: 418 HLEHDEVNSHSHHR-EKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRD 476
Query: 281 ENPWITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
+NPW+TV+ NG VRVKK+WD+EELGPEKTIDFWV I N N G
Sbjct: 477 DNPWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAG 520
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 30/143 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L + A+D
Sbjct: 1447 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRRRYELRLAASD-- 1491
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ + T V + V D NDN PVF + YR + + N+ + V+ATD
Sbjct: 1492 NLKENYTTVIIHVKDVNDNPPVFERPTYR---TQITEEDDRNLP-----KRVLQVTATDG 1543
Query: 148 DGDKVAYKLAVPSNLVVIVPQTG 170
D D+ P N+V + G
Sbjct: 1544 DKDR-------PQNIVYFLTGQG 1559
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 84/193 (43%), Gaps = 40/193 (20%)
Query: 28 VRYSI-TQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQ---YSLVITA 83
+RY++ QG TF + PT SG++ + ++D E++ Q YSL++TA
Sbjct: 683 IRYTLKAQGQGAGTFNI-GPT-----------SGIVKLAK-ELDFEDLRQPHVYSLIVTA 729
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
T+ G +T+ V D NDN+P F Y+ D L +SI V
Sbjct: 730 TEDSGGFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLG---------TSILRVK 780
Query: 144 ATDADGD---KVAY-----KLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQ 195
A DAD ++ Y AV SN +++ +L D +++ YE V A D
Sbjct: 781 AMDADSGSNAEIEYLVSDDHFAVDSNGIIV--NNKQL----DADNNNAYYEFMVTAKDKG 834
Query: 196 SPSRYAREPAQVW 208
P++ +V+
Sbjct: 835 EPAKSGTATVRVY 847
>gi|198475483|ref|XP_002132931.1| GA26093 [Drosophila pseudoobscura pseudoobscura]
gi|198138844|gb|EDY70333.1| GA26093 [Drosophila pseudoobscura pseudoobscura]
Length = 3116
Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 168/342 (49%), Positives = 230/342 (67%), Gaps = 23/342 (6%)
Query: 2 ENSKSGTGVKGLPILVASSHK-------HPHQLVRYSITQGNDNHTFALKNPTTHE-IRN 53
EN +GT V+G+P++ A S P + VRY+I GN + FAL+ ++ ++
Sbjct: 202 ENHPAGTRVRGVPLMQAFSGSILDEELAKPKK-VRYTIIDGNVDDAFALQERKANQNVQL 260
Query: 54 STES-------KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDN 106
+ S +SGV LVT+ +DRE A Y L + A+DV G++K + + + VLDENDN
Sbjct: 261 NARSLVIDGNDESGVWLVTNRPLDRELRAHYDLSVEASDVDGLDKTVSRIQIAVLDENDN 320
Query: 107 SPVFSQKVYRF-IVGDLKSSLNSNVS-HWKKFSSIGSVSATDADGDKVAYKLAVPSNLVV 164
PVF + Y+F I G SS+ SN S +++F+ +G V ATDADGDK+AY+L PSN+V+
Sbjct: 321 RPVFKSQDYKFAIAGQKSSSMESNNSVTYQRFAILGKVEATDADGDKIAYRLQSPSNVVI 380
Query: 165 IVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSP--VLQDEQLL 222
IVPQTGE++L G+P + ++ E V AHDL+ PS + +PA+V L+F +P V Q L
Sbjct: 381 IVPQTGEIMLAGEPSASELLIE--VVAHDLRYPSLLSAQPAKVLLEFLAPEPVSFIMQHL 438
Query: 223 QMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDEN 282
+ + + HR EKRRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD+N
Sbjct: 439 EHDEVNLHSHHR-EKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDN 497
Query: 283 PWITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
PW+TV+ NG VRVKK+WD+EELGPEKTIDFWV I N N G
Sbjct: 498 PWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAG 539
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 63/143 (44%), Gaps = 30/143 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L + A+D
Sbjct: 1466 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRRRYELRLAASD-- 1510
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ + T V + V D NDN PVF + YR + + N+ + V+ATD
Sbjct: 1511 NLKENYTTVIIHVKDVNDNPPVFERPTYR---TQITEEDDRNLP-----KRVLQVTATDG 1562
Query: 148 DGDKVAYKLAVPSNLVVIVPQTG 170
D D+ P N+V + G
Sbjct: 1563 DKDR-------PQNIVYFLTGQG 1578
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 37/141 (26%)
Query: 78 SLVITATD-----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSH 132
S+ + ATD ++G+ TV++ D NDN P+F ++ Y V +
Sbjct: 1064 SVTVKATDQGDPSLEGV----CSFTVEITDVNDNPPLFDRQKY--------------VEN 1105
Query: 133 WKKFSSIGS----VSATDADGDK---VAYKLAVPSN-----LVVIVPQTGELLLTGDPPS 180
K+ +SIG+ VSA+D D D + Y L+ P N I ++G ++L P
Sbjct: 1106 VKQDASIGTNILRVSASDEDADNNGAIVYSLSAPFNPNDLEYFDIQAESGWIVLK--KPL 1163
Query: 181 DDVEYELTVEAHDLQSPSRYA 201
D Y L V A D P YA
Sbjct: 1164 DRDRYRLRVRAQDKGQPPSYA 1184
>gi|195159812|ref|XP_002020772.1| GL15835 [Drosophila persimilis]
gi|194117722|gb|EDW39765.1| GL15835 [Drosophila persimilis]
Length = 3110
Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 168/342 (49%), Positives = 230/342 (67%), Gaps = 23/342 (6%)
Query: 2 ENSKSGTGVKGLPILVASSHK-------HPHQLVRYSITQGNDNHTFALKNPTTHE-IRN 53
EN +GT V+G+P++ A S P + VRY+I GN + FAL+ ++ ++
Sbjct: 202 ENHPAGTRVRGVPLMQAFSGSILDEELAKPKK-VRYTIIDGNVDDAFALQERKANQNVQL 260
Query: 54 STES-------KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDN 106
+ S +SGV LVT+ +DRE A Y L + A+DV G++K + + + VLDENDN
Sbjct: 261 NARSLVIDGNDESGVWLVTNRPLDRELRAHYDLSVEASDVDGLDKTVSRIQIAVLDENDN 320
Query: 107 SPVFSQKVYRF-IVGDLKSSLNSNVS-HWKKFSSIGSVSATDADGDKVAYKLAVPSNLVV 164
PVF + Y+F I G SS+ SN S +++F+ +G V ATDADGDK+AY+L PSN+V+
Sbjct: 321 RPVFKSQDYKFAIAGQKSSSMESNNSVTYQRFAILGKVEATDADGDKIAYRLQSPSNVVI 380
Query: 165 IVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSP--VLQDEQLL 222
IVPQTGE++L G+P + ++ E V AHDL+ PS + +PA+V L+F +P V Q L
Sbjct: 381 IVPQTGEIMLAGEPSASELLIE--VVAHDLRYPSLLSAQPAKVLLEFLAPEPVSFIMQHL 438
Query: 223 QMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDEN 282
+ + + HR EKRRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD+N
Sbjct: 439 EHDEVNLHSHHR-EKRRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDN 497
Query: 283 PWITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
PW+TV+ NG VRVKK+WD+EELGPEKTIDFWV I N N G
Sbjct: 498 PWVTVETNGAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAG 539
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 15/89 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L + A+D
Sbjct: 1519 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRRRYELRLAASD-- 1563
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYR 116
+ + T V + V D NDN PVF + YR
Sbjct: 1564 NLKENYTTVIIHVKDVNDNPPVFERPTYR 1592
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 37/141 (26%)
Query: 78 SLVITATD-----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSH 132
S+ + ATD ++G+ TV++ D NDN P+F ++ Y V +
Sbjct: 1064 SVTVKATDQGDPSLEGV----CSFTVEITDVNDNPPLFDRQKY--------------VEN 1105
Query: 133 WKKFSSIGS----VSATDADGDK---VAYKLAVPSN-----LVVIVPQTGELLLTGDPPS 180
K+ +SIG+ VSA+D D D + Y L+ P N I ++G ++L P
Sbjct: 1106 VKQDASIGTNILRVSASDEDADNNGAIVYSLSAPFNPNDLEYFDIQAESGWIVLK--KPL 1163
Query: 181 DDVEYELTVEAHDLQSPSRYA 201
D Y L V A D P YA
Sbjct: 1164 DRDRYRLRVRAQDKGQPPSYA 1184
>gi|357610679|gb|EHJ67093.1| hypothetical protein KGM_03051 [Danaus plexippus]
Length = 433
Score = 292 bits (747), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 166/328 (50%), Positives = 219/328 (66%), Gaps = 24/328 (7%)
Query: 2 ENSKSGTGVKGLPI-LVASSHKHPHQLVRYSITQGNDNHTFALK---NPTTHEIRNSTES 57
EN+ G+ V PI A + P + Y IT+GND FAL+ P+ +I+ S +
Sbjct: 122 ENAPPGSVVDCSPIKATALVNVGP---IAYKITKGNDQSVFALREKSRPSNSDIK-SVIT 177
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
V +V +D E Y LVI ATD+ G NKA V V+V++END+ P+F Q++Y F
Sbjct: 178 DGDVEIVAMKPLDSETKNLYDLVIQATDLHGANKASLPVRVNVINENDHEPIFEQEIYYF 237
Query: 118 IV-GDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTG 176
V G + ++ ++W++FS+IG V A DADGD+V Y L PSNL VIVPQTGEL+L G
Sbjct: 238 AVNGTCDDNCHNGTAYWQRFSTIGKVRAFDADGDRVYYSLKAPSNLAVIVPQTGELILAG 297
Query: 177 DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIE 236
+P D E EL V AHD+ P R + +PAQV+++F V+++ + + + R E
Sbjct: 298 EP--DGHEAELEVLAHDVGIPPRKS-QPAQVFIEF---VIRERKDMPTLHR--------E 343
Query: 237 KRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
KRRVTRAVRPTKRI+F+E DGE+EGR VF LEKET+RE FKIRDENPW+TV+ +G V+VK
Sbjct: 344 KRRVTRAVRPTKRIEFTEADGEVEGRAVFTLEKETDRETFKIRDENPWVTVEPSGVVKVK 403
Query: 297 KRWDFEELGPEKTIDFWVTINNQATNGG 324
K+WD+EELGPEKTIDFWVTI N A NGG
Sbjct: 404 KKWDYEELGPEKTIDFWVTITN-AGNGG 430
>gi|307173873|gb|EFN64630.1| Neural-cadherin [Camponotus floridanus]
Length = 1186
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 163/333 (48%), Positives = 220/333 (66%), Gaps = 26/333 (7%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDN-HTFALKNPTTHEIRNSTESKS- 59
ENS +GT + G P+L A H V Y I +D FAL+ ++E + KS
Sbjct: 122 ENSPAGTRIDGFPVLRA----HGSFPVHYKILPDDDGERPFALRENESNETGFNLTLKSQ 177
Query: 60 --GVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
GV +VT+ +DRE Y++VI A+D ++ ++ V VLD+NDNSP+F +++Y F
Sbjct: 178 MQGVRIVTAKPLDREIRGLYTIVIHASDGNFLSTSKISGIVHVLDQNDNSPIFERELYVF 237
Query: 118 IV--GDLKSSLNSNVSH---WKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGEL 172
+ +L + SNV WK+FS++G V+A DADGD+VAYKL PS+L+++VPQTGEL
Sbjct: 238 EIRPTNLDTLRKSNVVSLLGWKRFSTVGKVTAKDADGDRVAYKLVTPSSLLIVVPQTGEL 297
Query: 173 LLTGDP---PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKS 229
LL G+P P D E EL VEAHDL++PSR +PA+V ++F L D++
Sbjct: 298 LLAGEPEVSPEQDGECELVVEAHDLRTPSRSTEKPAKVIVRF---------LTTEPDQQP 348
Query: 230 EAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDE 289
E HRI+KRRVTRAVRPTK++DF+E DG +EG+I F LEKE E+E +KIRDEN W+TV
Sbjct: 349 EV-HRIQKRRVTRAVRPTKKVDFTEADGNIEGKIAFYLEKENEKETYKIRDENKWVTVGA 407
Query: 290 NGDVRVKKRWDFEELGPEKTIDFWVTINNQATN 322
NG V VK++WD+EELGPEKTIDFWVTI N T+
Sbjct: 408 NGSVMVKQKWDYEELGPEKTIDFWVTITNTGTD 440
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 50/189 (26%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE--EVAQYSLVITATD 85
V+YSI Q P + + + ++G +L T+ DRE + S+ + ATD
Sbjct: 922 VKYSIVQ----------QPNQKGTKFTVDEETGQVL-TNKVFDREGDDGKFVSVTVKATD 970
Query: 86 -----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG 140
++G+ TV++ D NDN P+F ++ Y V + K+ +SIG
Sbjct: 971 QGEPSLEGV----CSFTVEITDVNDNPPLFDRQRY--------------VENVKQDASIG 1012
Query: 141 S----VSATDADGDK---VAYKLAVPSN-----LVVIVPQTGELLLTGDPPSDDVEYELT 188
+ VSA+D D D + Y L+ P+N I P++G ++L P D Y L
Sbjct: 1013 TNILRVSASDEDADNNGAIVYSLSSPNNEQNLEYFEIQPESGWIVLK--KPLDRDSYRLR 1070
Query: 189 VEAHDLQSP 197
V A D P
Sbjct: 1071 VRASDRGMP 1079
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 27/161 (16%)
Query: 59 SGVLLVTSGDIDREEVAQ---YSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
SG++ + + ++D E++ Q YSL++TAT+ G +T+ V D NDN+P F Y
Sbjct: 621 SGIVKL-AKELDFEDLRQPHIYSLIVTATEDSGGFSTSVELTIRVSDVNDNAPKFELPDY 679
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAY-----KLAVPSNLVVIVP 167
+ D L +N I V ATDAD ++ Y +V SN +++
Sbjct: 680 QAHNVDEDIPLGTN---------ILKVKATDADSGANAEIEYLVSDDHFSVDSNGIIV-- 728
Query: 168 QTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVW 208
+L D +++ YE V A D PS+ +++
Sbjct: 729 NNKQL----DADNNNAYYEFIVTAKDKGEPSKTGTATVRIY 765
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 58/124 (46%), Gaps = 15/124 (12%)
Query: 75 AQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHW 133
A Y ++TA D +K T V + ++ND P FSQ+VY V D + N+ V+
Sbjct: 740 AYYEFIVTAKDKGEPSKTGTATVRIYTKNKNDEEPKFSQQVYTPNV-DENAGPNTLVT-- 796
Query: 134 KKFSSIGSVSATDADGDKVAYKLA---VPSNLVVIVPQTGELLLTGDPPS-DDVEYELTV 189
+V A+D DGD V ++ S VI TG + L G S D +YEL V
Sbjct: 797 -------TVVASDKDGDDVRFRFVGGNTTSGQFVIEEITGVIRLHGKEISLDRDKYELNV 849
Query: 190 EAHD 193
A D
Sbjct: 850 TALD 853
>gi|332029953|gb|EGI69778.1| Neural-cadherin [Acromyrmex echinatior]
Length = 1145
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 160/331 (48%), Positives = 214/331 (64%), Gaps = 23/331 (6%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKS-- 59
ENS GT + G P+L A H + + N FAL+ +++ + K+
Sbjct: 122 ENSPIGTRIDGFPVLRARGSFPVHYKI---LPDNNGERPFALRETESNDTGFNLTLKNQM 178
Query: 60 -GVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
GV +VT+ +DRE Y++VI A+D ++ ++ V VLD+NDNSP+F +++Y F
Sbjct: 179 QGVRVVTAKPLDREIHGIYTVVIHASDGNFLSTSKISGIVHVLDQNDNSPIFERELYIFE 238
Query: 119 V--GDLKSSLNSNVSH--WKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLL 174
+ +L + NV+ WK+FS++G V+A DADGDKVAYKL PS+L+++VPQTGELLL
Sbjct: 239 IRPTNLDTLRKDNVAQPGWKRFSTVGKVTAKDADGDKVAYKLVTPSSLLIVVPQTGELLL 298
Query: 175 TGDP---PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEA 231
TG+P P D E EL VEAHDL PSR +PA+V ++F L D E
Sbjct: 299 TGEPEVNPEQDSECELIVEAHDLHMPSRSTEKPAKVIVRF---------LTSEPDDPPEV 349
Query: 232 PHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENG 291
HRIEKRRVTRAVRPTK++DF+E DG +EG+I F LEKE E+E +KIRDEN W+TV NG
Sbjct: 350 -HRIEKRRVTRAVRPTKKVDFTEADGNIEGKIAFYLEKENEKETYKIRDENKWVTVGANG 408
Query: 292 DVRVKKRWDFEELGPEKTIDFWVTINNQATN 322
V VK++WD+EELGPEKTIDFWVTI N T+
Sbjct: 409 SVMVKQKWDYEELGPEKTIDFWVTITNTDTD 439
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 50/189 (26%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE--EVAQYSLVITATD 85
V+YSI Q P + + + ++G +L T+ DRE + S+ + ATD
Sbjct: 919 VKYSIVQ----------QPNQKGTKFTVDEETGQVL-TNKVFDREGDDGKFVSVTVKATD 967
Query: 86 -----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG 140
++G+ TV++ D NDN P+F ++ Y V + K+ +SIG
Sbjct: 968 QGEPSLEGV----CSFTVEITDVNDNPPLFDRQRY--------------VENVKQDASIG 1009
Query: 141 S----VSATDADGDK---VAYKLAVPSN-----LVVIVPQTGELLLTGDPPSDDVEYELT 188
+ VSA+D D D + Y L+ P+N I P++G ++L P D Y L
Sbjct: 1010 TNILRVSASDEDADNNGAIVYSLSSPNNEQNLEYFEIQPESGWIVLK--KPLDRDSYRLR 1067
Query: 189 VEAHDLQSP 197
V A D P
Sbjct: 1068 VRASDRGMP 1076
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 27/161 (16%)
Query: 59 SGVLLVTSGDIDREEVAQ---YSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
SG++ + + ++D E++ Q YSL++TAT+ G +T+ V D NDN+P F Y
Sbjct: 618 SGIVKL-AKELDFEDLRQPHIYSLIVTATEDSGGFSTSVELTIRVSDVNDNAPKFELPDY 676
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAY-----KLAVPSNLVVIVP 167
+ D L +N I V ATDAD ++ Y +V SN +++
Sbjct: 677 QAHNVDEDIPLGTN---------ILKVKATDADSGANAEIEYLVSDDHFSVDSNGIIV-- 725
Query: 168 QTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVW 208
+L D +++ YE V A D PS+ +++
Sbjct: 726 NNKQL----DADNNNAYYEFIVTAKDKGEPSKTGTATVRIY 762
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 58/124 (46%), Gaps = 15/124 (12%)
Query: 75 AQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHW 133
A Y ++TA D +K T V + ++ND P FSQ+VY V D + N+ V+
Sbjct: 737 AYYEFIVTAKDKGEPSKTGTATVRIYTKNKNDEEPKFSQQVYTPNV-DENAGPNTLVT-- 793
Query: 134 KKFSSIGSVSATDADGDKVAYKLA---VPSNLVVIVPQTGELLLTGDPPS-DDVEYELTV 189
+V A+D DGD V ++ S VI TG + L G S D +YEL V
Sbjct: 794 -------TVVASDKDGDNVRFRFVGGNTTSGQFVIEEITGVIRLHGKEISLDRDKYELNV 846
Query: 190 EAHD 193
A D
Sbjct: 847 TALD 850
>gi|345493993|ref|XP_003427197.1| PREDICTED: LOW QUALITY PROTEIN: neural-cadherin-like [Nasonia
vitripennis]
Length = 3062
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 164/334 (49%), Positives = 210/334 (62%), Gaps = 26/334 (7%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGND-NHTFAL-KNPTTHEIRNST--ES 57
EN+ GT V G P+L H + V YSI +D + FAL + H N T
Sbjct: 155 ENAAPGTPVDGFPVL----HARGNFPVHYSIEPEDDGSRPFALAETHLKHTGFNLTLRSP 210
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
G+ +VT+ +DRE + Y LV+ A+D I+ + +V VLD NDNSP+F Q VY F
Sbjct: 211 NQGIRVVTARPLDREAKSSYRLVVRASDSDYISSSRIEGSVAVLDVNDNSPIFEQAVYSF 270
Query: 118 IVGD-----LKSSLNSNVS-HWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGE 171
+ L+ + +V WK+FS+IG V A DADGDKVAYKL PSNLV+IVPQTGE
Sbjct: 271 ELSPTNLEALRDDADGSVQPQWKRFSTIGKVLAKDADGDKVAYKLITPSNLVIIVPQTGE 330
Query: 172 LLLTGDP---PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRK 228
LLL G+P P D E E VEAHDL++PSR A PA+V ++F L ++
Sbjct: 331 LLLAGEPEVSPDLDTESEFLVEAHDLRTPSRTAPTPARVLVRF---------LTSGPEKP 381
Query: 229 SEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVD 288
HRIEKRRVTRAVRPTK+++F+E DG++EG++ F LEKE E+E +KIRDEN W+TV
Sbjct: 382 ELDVHRIEKRRVTRAVRPTKKVEFTEADGDVEGKVAFHLEKENEKETYKIRDENQWVTVG 441
Query: 289 ENGDVRVKKRWDFEELGPEKTIDFWVTINNQATN 322
NG VRVK +WD+E LG EKTIDFWVTI N T+
Sbjct: 442 SNGTVRVKHKWDYEALGAEKTIDFWVTITNPDTD 475
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 15/89 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L +TA+D
Sbjct: 1405 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRKRYELKLTASD-- 1449
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYR 116
+ + T V + V D NDN PVF + YR
Sbjct: 1450 NLKENYTIVVIHVKDVNDNPPVFERPTYR 1478
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 41/145 (28%)
Query: 78 SLVITATD-----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSH 132
S+ + ATD ++G+ TV++ D NDN P+F ++ Y V +
Sbjct: 996 SVTVKATDQGEPSLEGV----CSFTVEITDVNDNPPLFDRQKY--------------VEN 1037
Query: 133 WKKFSSIGS----VSATDADGDK---VAYKLAVPSN-----LVVIVPQTGELLLT----G 176
K+ +SIG+ VSA+D D D + Y L+ P++ I P++G ++L G
Sbjct: 1038 VKQDASIGTNILRVSASDEDADNNGAIVYSLSAPNDEKGLEYFEIQPESGWIVLKKPLDG 1097
Query: 177 DPPSDDVEYELTVEAHDLQSPSRYA 201
P D +Y L V A D SP A
Sbjct: 1098 CFPRD--KYRLKVSASDRGSPPSCA 1120
>gi|307200812|gb|EFN80865.1| Neural-cadherin [Harpegnathos saltator]
Length = 1176
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 156/331 (47%), Positives = 210/331 (63%), Gaps = 23/331 (6%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALK-NPTTHEIRNST--ESK 58
ENS +GT + G PIL A H + + FAL+ N ++ N T K
Sbjct: 122 ENSPAGTWIDGFPILRARGSFPVHYKI---LPDDTGERPFALRENESSETGFNLTLNSQK 178
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
GV +VT+ +DRE Y++VI A+D I+ ++ V VLD NDNSP+F +++Y F
Sbjct: 179 QGVRVVTAKPLDREVRELYTVVIHASDGNFISTSKISGVVHVLDRNDNSPIFERELYIFE 238
Query: 119 VG----DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLL 174
+ D N WK+FS +G V+A DADGDK+AYKL PS+L+++VPQTGEL+L
Sbjct: 239 IRPTNLDTLHKGNEVSPGWKRFSVVGKVTAKDADGDKIAYKLVTPSSLMIVVPQTGELIL 298
Query: 175 TGDP---PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEA 231
G+P D E EL VEAHD+++PSR +PA+V ++F + D+Q +
Sbjct: 299 VGEPEINAEQDSECELVVEAHDIRTPSRNTEKPAKVIVRFLTSEPDDQQEV--------- 349
Query: 232 PHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENG 291
HRI+KRRVTRAVRPTK++DF+E DG +EG+I F LEKE E+E +KIRDEN W+TV NG
Sbjct: 350 -HRIQKRRVTRAVRPTKKVDFTEADGNIEGKIAFYLEKENEKETYKIRDENKWVTVGANG 408
Query: 292 DVRVKKRWDFEELGPEKTIDFWVTINNQATN 322
V VK++WD+EELGPEKTIDFWVTI N T+
Sbjct: 409 SVMVKQKWDYEELGPEKTIDFWVTITNTDTD 439
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 27/161 (16%)
Query: 59 SGVLLVTSGDIDREEVAQ---YSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
SG++ + + ++D E++ Q YSL++TAT+ G +T+ V D NDN+P F Y
Sbjct: 618 SGIVKL-AKELDFEDLRQPHIYSLIVTATEDSGGFSTSVELTIRVSDVNDNAPKFELPDY 676
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAY-----KLAVPSNLVVIVP 167
+ D SL +N+ V ATDAD ++ Y +V SN +++
Sbjct: 677 QAHNVDEDVSLGTNILR---------VKATDADSGVNAEIEYLVSDDHFSVDSNGIIV-- 725
Query: 168 QTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVW 208
+L D +++ YE V A D PS+ +++
Sbjct: 726 NNKQL----DADNNNAYYEFIVTAKDKGEPSKTGTATVRIY 762
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 50/189 (26%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE--EVAQYSLVITATD 85
V+YSI Q P + + + ++G +L T+ DRE + S+ + ATD
Sbjct: 919 VKYSIVQ----------QPNQKGTKFTVDEETGQVL-TNKVFDREGDDGKFVSVTVKATD 967
Query: 86 -----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG 140
++G+ TV++ D NDN P+F ++ Y V + K+ +SIG
Sbjct: 968 QGEPSLEGV----CSFTVEITDVNDNPPLFDRQRY--------------VENVKQDASIG 1009
Query: 141 S----VSATDADGDK---VAYKLAVPSN-----LVVIVPQTGELLLTGDPPSDDVEYELT 188
+ VSA+D D D + Y L+ P+N I P++G ++L P D Y+L
Sbjct: 1010 TNILRVSASDEDADNNGAITYTLSSPNNDQGLEYFEIQPESGWIVLK--KPLDRETYKLE 1067
Query: 189 VEAHDLQSP 197
A D P
Sbjct: 1068 AMAQDKGFP 1076
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 58/124 (46%), Gaps = 15/124 (12%)
Query: 75 AQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHW 133
A Y ++TA D +K T V + ++ND P FSQ+VY V D + N+ V+
Sbjct: 737 AYYEFIVTAKDKGEPSKTGTATVRIYTKNKNDEEPKFSQQVYTPNV-DENAGPNTLVT-- 793
Query: 134 KKFSSIGSVSATDADGDKVAYKLA---VPSNLVVIVPQTGELLLTGDPPS-DDVEYELTV 189
+V A+D DGD V ++ S VI TG + L G S D +YEL V
Sbjct: 794 -------TVVASDKDGDNVRFRFVGGNTTSGQFVIEEITGVIRLHGKEISLDRDKYELNV 846
Query: 190 EAHD 193
A D
Sbjct: 847 TALD 850
>gi|380012137|ref|XP_003690144.1| PREDICTED: neural-cadherin-like [Apis florea]
Length = 1097
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 161/336 (47%), Positives = 212/336 (63%), Gaps = 30/336 (8%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSIT--QGNDNHTFALK----NPTTHEIRNST 55
EN +GT V G P+L A H Y+I +G D FALK + T + +
Sbjct: 129 ENRPAGTLVDGFPVLRARGSFPVH----YAILGDEGGD-RPFALKEEGSDRTGFNLTLGS 183
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
E + GV +VT+ +DRE Y++ I A+D + + V VLDENDNSPVF ++ Y
Sbjct: 184 E-REGVRVVTARPLDREAAKAYAVAIHASDGYLLTSSRIDGVVRVLDENDNSPVFEREEY 242
Query: 116 RFIV--------GDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVP 167
F G + SL WK+FS++G V A DADGDKVAYKLA PS L+V+VP
Sbjct: 243 TFEARPSSREAGGRRRGSLG-----WKRFSTVGKVVAKDADGDKVAYKLATPSRLLVVVP 297
Query: 168 QTGELLLTGDP---PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQF--NSPVLQDEQLL 222
QTGEL+L G+P P +D E VEAHD+++PSR + +PA+V ++F + P++ +
Sbjct: 298 QTGELMLVGEPEIGPEEDAECVAVVEAHDVRNPSRSSEKPAKVVVRFLTSDPIVVAKHED 357
Query: 223 QMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDEN 282
D HRI KRRVTRAVRPTK++DF+E DG++EG+IVF LEKE E+E +KIRDEN
Sbjct: 358 GDDDDGVVEVHRIRKRRVTRAVRPTKKVDFTEADGDIEGKIVFYLEKENEKETYKIRDEN 417
Query: 283 PWITVDENGDVRVKKRWDFEELGPEKTIDFWVTINN 318
W+TVD NG V VK++WD+EELG EKTIDFWVTI N
Sbjct: 418 KWVTVDSNGSVIVKQKWDYEELGSEKTIDFWVTITN 453
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 14/148 (9%)
Query: 68 DIDREEVAQ---YSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
++D E++ Q YSL++TAT+ G +T+ V D NDN+P F Y+ D
Sbjct: 647 ELDFEDLRQPHIYSLIVTATEDSGGFSTSVELTIRVSDVNDNAPKFELPDYQAHNVDEDI 706
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTG--DPPSDD 182
SL +SI V ATDAD A + S+ V +G ++ D +++
Sbjct: 707 SLG---------TSILKVKATDADSGANAEIEYLVSDDHFSVDSSGIIVNNKQLDADNNN 757
Query: 183 VEYELTVEAHDLQSPSRYAREPAQVWLQ 210
YE V A D P + +++ +
Sbjct: 758 AYYEFVVTARDKGEPPKTGTATVRIYTK 785
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 17/125 (13%)
Query: 75 AQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSH 132
A Y V+TA D KG TV + ++ND P FSQ+VY V D + N+ V+
Sbjct: 758 AYYEFVVTARD-KGEPPKTGTATVRIYTKNKNDEEPKFSQQVYTPNV-DENAGPNTLVT- 814
Query: 133 WKKFSSIGSVSATDADGDKVAYKLA---VPSNLVVIVPQTGELLLTGDPPS-DDVEYELT 188
+V A+D DGD V ++ S VI TG + L G S D +YEL
Sbjct: 815 --------TVVASDKDGDNVRFRFVGGNTTSGQFVIEEITGVIRLHGKAISLDRDKYELN 866
Query: 189 VEAHD 193
V A D
Sbjct: 867 VTALD 871
>gi|340722540|ref|XP_003399662.1| PREDICTED: neural-cadherin-like [Bombus terrestris]
Length = 3006
Score = 277 bits (708), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 156/328 (47%), Positives = 216/328 (65%), Gaps = 26/328 (7%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALK----NPTTHEIRNSTES 57
ENS +GT + G P+L A H + + + FALK N T + +++
Sbjct: 121 ENSAAGTLIDGFPVLRARGSFPVHYTI---LPDETGDRPFALKEEDSNQTGFNLTLNSQ- 176
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
K GV +VT+ +DRE Y++VI A+D ++ ++ + V VLDENDNSPVF ++ Y F
Sbjct: 177 KEGVRVVTAKPLDRETKKLYTVVIHASDGYLLSSSQINGLVHVLDENDNSPVFEKEQYTF 236
Query: 118 IVGDLKS-SLNSN---VSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELL 173
+ S +N N + WK+FS++G V+A DADGDKVAYKL PS+L+V+VPQTGEL+
Sbjct: 237 EIRPTSSDGINKNSVALPGWKRFSTVGKVAAKDADGDKVAYKLLTPSSLLVVVPQTGELM 296
Query: 174 LTGDPP---SDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSE 230
L G+P +D E + VEAHD++SPSR +PA+V ++F + D +++
Sbjct: 297 LVGEPEITMEEDSECVVIVEAHDVRSPSRSTEKPAKVVVRF---LTSDSTEVEV------ 347
Query: 231 APHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDEN 290
HRI+KRRVTRAVRPTK++DF+E DG++EG+I F LEKE E+E +KIRDEN W+TVD N
Sbjct: 348 --HRIQKRRVTRAVRPTKKVDFTEADGDIEGKIAFYLEKENEKETYKIRDENKWVTVDSN 405
Query: 291 GDVRVKKRWDFEELGPEKTIDFWVTINN 318
G V VK++WD+EELG EKTIDFWVTI N
Sbjct: 406 GSVIVKQKWDYEELGSEKTIDFWVTITN 433
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 64/144 (44%), Gaps = 32/144 (22%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L +TA+D
Sbjct: 1364 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRKRYELRLTASD-- 1408
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRF-IVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+ + T V + V D NDN PVF + Y+ I + +L V V+ATD
Sbjct: 1409 NLKENYTTVVIHVKDVNDNPPVFERPTYKTQITEEDDRTLPKRVL---------GVTATD 1459
Query: 147 ADGDKVAYKLAVPSNLVVIVPQTG 170
D D+ P N+V + G
Sbjct: 1460 GDKDR-------PQNIVYFLTGQG 1476
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 50/189 (26%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE--EVAQYSLVITATD 85
V+YSI Q P + + + ++G +L T+ DRE + S+ + ATD
Sbjct: 920 VKYSIVQ----------QPNQKGTKFTVDEETGQVL-TNKVFDREGDDGKFVSVTVKATD 968
Query: 86 -----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG 140
++G+ TV++ D NDN P+F ++ Y V + K+ +SIG
Sbjct: 969 QGEPSLEGV----CSFTVEITDVNDNPPLFDRQRY--------------VENVKQDASIG 1010
Query: 141 S----VSATDADGDK---VAYKLAVPSN-----LVVIVPQTGELLLTGDPPSDDVEYELT 188
+ VSA+D D D + Y L+ P+N I P++G ++L P D Y+L
Sbjct: 1011 TNILRVSASDEDADNNGAITYSLSSPNNEQGLEYFEIQPESGWIVLK--KPLDREMYKLE 1068
Query: 189 VEAHDLQSP 197
A D P
Sbjct: 1069 AMAQDKGFP 1077
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 17/125 (13%)
Query: 75 AQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSH 132
A Y V+TA D KG TV + ++ND P FSQ+VY V D + N+ V+
Sbjct: 738 AYYEFVVTAKD-KGEPPKTGTATVRIYTKNKNDEEPKFSQQVYTPNV-DENAGPNTLVT- 794
Query: 133 WKKFSSIGSVSATDADGDKVAYKLA---VPSNLVVIVPQTGELLLTGDPPS-DDVEYELT 188
+V A+D DGD V ++ S VI TG + L G S D +YEL
Sbjct: 795 --------TVVASDKDGDNVRFRFVGGNTTSGQFVIEEITGVIRLHGKAISLDRDKYELN 846
Query: 189 VEAHD 193
V A D
Sbjct: 847 VTALD 851
>gi|350418529|ref|XP_003491887.1| PREDICTED: neural-cadherin-like [Bombus impatiens]
Length = 3006
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 156/329 (47%), Positives = 214/329 (65%), Gaps = 28/329 (8%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALK----NPTTHEIRNSTES 57
ENS +GT + G P+L A H + + + FALK N T + +++
Sbjct: 121 ENSAAGTLIDGFPVLRARGSFPVHYTI---LPDETGDRPFALKEEDSNQTGFNLTLNSQ- 176
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
K GV +VT+ +DRE Y++VI A+D ++ ++ + V VLDENDNSPVF ++ Y F
Sbjct: 177 KEGVRVVTAKPLDRETKKLYTVVIHASDGYLLSSSQINGLVHVLDENDNSPVFEKEQYTF 236
Query: 118 IVGDLKS-SLNSN---VSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELL 173
+ S +N N + WK+FS++G V+A DADGDKVAYKL PS+L+V+VPQTGEL+
Sbjct: 237 EIRPTSSDGINKNSVALPGWKRFSTVGKVAAKDADGDKVAYKLLTPSSLLVVVPQTGELM 296
Query: 174 LTGDP---PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSE 230
L G+P +D E + VEAHD++SPSR +PA+V ++F + +E
Sbjct: 297 LVGEPEITTEEDSECVVIVEAHDVRSPSRSTEKPAKVVVRF------------LTSESTE 344
Query: 231 AP-HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDE 289
HRI+KRRVTRAVRPTK++DF+E DG++EG+I F LEKE E+E +KIRDEN W+TVD
Sbjct: 345 VEVHRIQKRRVTRAVRPTKKVDFTEADGDVEGKIAFYLEKENEKETYKIRDENKWVTVDS 404
Query: 290 NGDVRVKKRWDFEELGPEKTIDFWVTINN 318
NG V VK++WD+EELG EKTIDFWVTI N
Sbjct: 405 NGSVIVKQKWDYEELGSEKTIDFWVTITN 433
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 64/144 (44%), Gaps = 32/144 (22%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L +TA+D
Sbjct: 1364 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRKRYELRLTASD-- 1408
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRF-IVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+ + T V + V D NDN PVF + Y+ I + +L V V+ATD
Sbjct: 1409 NLKENYTTVVIHVKDVNDNPPVFERPTYKTQITEEDDRTLPKRVL---------GVTATD 1459
Query: 147 ADGDKVAYKLAVPSNLVVIVPQTG 170
D D+ P N+V + G
Sbjct: 1460 GDKDR-------PQNIVYFLTGQG 1476
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 50/189 (26%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE--EVAQYSLVITATD 85
V+YSI Q P + + + ++G +L T+ DRE + S+ + ATD
Sbjct: 920 VKYSIVQ----------QPNQKGTKFTVDEETGQVL-TNKVFDREGDDGKFVSVTVKATD 968
Query: 86 -----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG 140
++G+ TV++ D NDN P+F ++ Y V + K+ +SIG
Sbjct: 969 QGEPSLEGV----CSFTVEITDVNDNPPLFDRQRY--------------VENVKQDASIG 1010
Query: 141 S----VSATDADGDK---VAYKLAVPSN-----LVVIVPQTGELLLTGDPPSDDVEYELT 188
+ VSA+D D D + Y L+ P+N I P++G ++L P D Y+L
Sbjct: 1011 TNILRVSASDEDADNNGAITYSLSSPNNEQGLEYFEIQPESGWIVLK--KPLDREMYKLE 1068
Query: 189 VEAHDLQSP 197
A D P
Sbjct: 1069 AMAQDKGFP 1077
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 17/125 (13%)
Query: 75 AQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSH 132
A Y V+TA D KG TV + ++ND P FSQ+VY V D + N+ V+
Sbjct: 738 AYYEFVVTAKD-KGEPPKTGTATVRIYTKNKNDEEPKFSQQVYTPNV-DENAGPNTLVT- 794
Query: 133 WKKFSSIGSVSATDADGDKVAYKLA---VPSNLVVIVPQTGELLLTGDPPS-DDVEYELT 188
+V A+D DGD V ++ S VI TG + L G S D +YEL
Sbjct: 795 --------TVVASDKDGDNVRFRFVGGNTTSGQFVIEEITGVIRLHGKAISLDRDKYELN 846
Query: 189 VEAHD 193
V A D
Sbjct: 847 VTALD 851
>gi|110764123|ref|XP_392099.3| PREDICTED: neural-cadherin [Apis mellifera]
Length = 3043
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 155/339 (45%), Positives = 214/339 (63%), Gaps = 29/339 (8%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALK----NPTTHEIRNSTES 57
EN +GT V+G P+L A H + G+ FAL+ + T + ++E
Sbjct: 123 ENRGAGTLVEGFPVLRARGSFPVHYTILADEATGD--RPFALREEDSSRTGFNLTLASE- 179
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
K GV +VT+ +DRE + Y++VI A+D + V VLDENDNSPVF ++ Y F
Sbjct: 180 KEGVRVVTARPLDREASSAYTVVIHASDGYLLTSTRIDGVVRVLDENDNSPVFEREEYAF 239
Query: 118 IVGDLKSSLNSNVSH---------WKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQ 168
+ + WK+FS++G V A DADGDKVAYKL PS L+V+VPQ
Sbjct: 240 EARPSRRGIGEESGRNSVELVEPGWKRFSTVGKVVAKDADGDKVAYKLVTPSRLLVVVPQ 299
Query: 169 TGELLLTGDPP---SDDVEYELTVEAHDLQSPSRYAREPAQVWLQF--NSPVLQDEQLLQ 223
TGEL+L G+P +D E VEAHD+++PSR + +PA+V ++F + P++++E ++
Sbjct: 300 TGELMLVGEPEVGMDEDGECVAMVEAHDVRNPSRSSVKPAKVVVRFLTSDPIVEEEAAVE 359
Query: 224 MIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENP 283
+ HRI+KRRVTRAVRPTK++DF+E DG++EG+IVF LEKE E+E +KIRDEN
Sbjct: 360 V--------HRIQKRRVTRAVRPTKKVDFTEADGDIEGKIVFYLEKENEKETYKIRDENK 411
Query: 284 WITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATN 322
W+TVD NG V VK++WD+EELG EKTIDFWVTI N N
Sbjct: 412 WVTVDSNGSVIVKQKWDYEELGSEKTIDFWVTITNTGKN 450
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 64/144 (44%), Gaps = 32/144 (22%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L +TA+D
Sbjct: 1389 IRYEITSGNIGGAFAVKNMT------------GAIYV-AGALDYETRKRYELRLTASD-- 1433
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRF-IVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+ + T V + V D NDN PVF + Y+ I + +L V V+ATD
Sbjct: 1434 NLKENYTTVVIHVKDVNDNPPVFERPTYKTQITEEDDRTLPKRVL---------GVTATD 1484
Query: 147 ADGDKVAYKLAVPSNLVVIVPQTG 170
D D+ P N+V + G
Sbjct: 1485 GDKDR-------PQNIVYFLTGQG 1501
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 14/148 (9%)
Query: 68 DIDREEVAQ---YSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
++D E++ Q YSL++TAT+ G +T+ V D NDN+P F Y+ D
Sbjct: 648 ELDFEDLRQPHIYSLIVTATEDSGGFSTSVELTIRVSDVNDNAPKFELPDYQAHNVDEDI 707
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTG--DPPSDD 182
SL +SI V ATDAD A + S+ V +G ++ D +++
Sbjct: 708 SLG---------TSILKVKATDADSGANAEIEYLVSDDHFSVDSSGIIVNNKQLDADNNN 758
Query: 183 VEYELTVEAHDLQSPSRYAREPAQVWLQ 210
YE V A D P + +++ +
Sbjct: 759 AYYEFVVTARDKGEPPKTGTATVRIYTK 786
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 84/189 (44%), Gaps = 54/189 (28%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE--EVAQYSLVITATD 85
V+YSI Q P + + + ++G +L T+ DRE + S+ + ATD
Sbjct: 941 VKYSIVQ----------QPNQKGTKFTVDEETGQVL-TNKVFDREGDDGKFVSVTVKATD 989
Query: 86 -----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG 140
++G+ TV++ D NDN P+F ++ Y V + K+ +SIG
Sbjct: 990 QGEPSLEGV----CSFTVEITDVNDNPPLFDRQRY--------------VENVKQDASIG 1031
Query: 141 S----VSATDADGDK---VAYKLAVPSN-----LVVIVPQTGELLLT----GDPPSDDVE 184
+ VSA+D D D + Y L+ P+N I P++G ++L G P D
Sbjct: 1032 TNILRVSASDEDADNNGAITYSLSSPNNDQGLEYFEIQPESGWIVLKKPLDGCFPRD--S 1089
Query: 185 YELTVEAHD 193
Y L V A D
Sbjct: 1090 YRLRVRASD 1098
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 58/125 (46%), Gaps = 17/125 (13%)
Query: 75 AQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSH 132
A Y V+TA D KG TV + ++ND P FSQ+VY V D + N+ V+
Sbjct: 759 AYYEFVVTARD-KGEPPKTGTATVRIYTKNKNDEEPKFSQQVYTPNV-DENAGPNTLVT- 815
Query: 133 WKKFSSIGSVSATDADGDKVAYKLA---VPSNLVVIVPQTGELLLTGDPPS-DDVEYELT 188
+V A+D DGD V ++ S VI TG + L G S D +YEL
Sbjct: 816 --------TVVASDKDGDNVRFRFVGGNTTSGQFVIEEITGVIRLHGKAISLDRDKYELN 867
Query: 189 VEAHD 193
V A D
Sbjct: 868 VTALD 872
>gi|383864721|ref|XP_003707826.1| PREDICTED: neural-cadherin-like [Megachile rotundata]
Length = 579
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 147/332 (44%), Positives = 210/332 (63%), Gaps = 24/332 (7%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNP-TTHEIRNST--ES 57
+ENS +GT + G P+L A H + + + FAL+ + H N T
Sbjct: 118 LENSVAGTLIDGFPVLRARGSFPVHYTI---LPDETGDRPFALQEEDSNHTGFNLTLNSQ 174
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
K GV +VT+ +DRE Y++ I A+D ++ ++ + V VLD NDNSPVF +++Y F
Sbjct: 175 KDGVRVVTAKPLDRETKKLYTVAIQASDGYLLSSSQINGIVHVLDMNDNSPVFEKELYTF 234
Query: 118 IVG----DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELL 173
+ D + + W++FS +G V A D DGDKVAYKL S+L+V+VPQTGEL+
Sbjct: 235 EIRPSNVDAIHKNSVTLPGWERFSVVGKVVAKDGDGDKVAYKLLTHSSLLVVVPQTGELM 294
Query: 174 LTGDPP---SDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSE 230
L G+P +D EY + VEAHD++SPSR +PA+V ++F + + ++
Sbjct: 295 LVGEPDVTMDEDSEYVVIVEAHDVRSPSRTTEKPAKVIVRFLTSQPMEVEV--------- 345
Query: 231 APHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDEN 290
HRI+KRRVTRAVRPTK+++F+E DG++EG+IVF LEKE E+E +KIRDEN W++V N
Sbjct: 346 --HRIQKRRVTRAVRPTKKVEFTEADGDVEGKIVFYLEKENEKEVYKIRDENKWVSVCPN 403
Query: 291 GDVRVKKRWDFEELGPEKTIDFWVTINNQATN 322
G V VK++WD+EELG EKT+DFWVTI N T+
Sbjct: 404 GSVVVKQKWDYEELGSEKTLDFWVTITNTDTD 435
>gi|61162138|dbj|BAD91057.1| Le-cadherin [Ligia exotica]
Length = 3009
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 138/330 (41%), Positives = 191/330 (57%), Gaps = 44/330 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT ++GL + A + + Y + G+D TFAL H++ G
Sbjct: 144 ENLPPGTELQGLEEVEAVGDED----ITYELIGGHD--TFAL-----HQV--------GA 184
Query: 62 L--LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
L +VT +DRE + + L + A D G++ AE ++V VLD ND++P+F+Q ++ F V
Sbjct: 185 LPSIVTLRALDREAQSVHKLRLRARDNLGVDSAEAELSVHVLDMNDHAPIFTQSLFYFFV 244
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPP 179
NVS +F +IG V A D DGDKV Y+LA PSN+ IVPQTGE+LL P
Sbjct: 245 P-------LNVS---RFDAIGKVVAHDGDGDKVVYQLAHPSNIFTIVPQTGEILLIDVPE 294
Query: 180 SDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSP----------VLQDEQLLQMIDRKS 229
+ + YEL +EAHD + P+ Y+ A+ ++F+ P ++ DE D
Sbjct: 295 A--MVYELELEAHDNRKPTLYSDSLARAHIEFHYPGDTLFLGGSNLISDEVTEDSEDPDD 352
Query: 230 EAPHRIEKRRVTRA-VRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVD 288
R RV R +R TK + FSE DG +EG++VF LEKE + E FKIRD NPW+ V+
Sbjct: 353 PDRIRRSLSRVKRGQLRHTKELSFSEADGAIEGKVVFRLEKEIQHETFKIRDPNPWVEVE 412
Query: 289 ENGDVRVKKRWDFEELGPEKTIDFWVTINN 318
+GDVRVKK+WD+E+LGPEKTIDFWVTI N
Sbjct: 413 PDGDVRVKKKWDYEDLGPEKTIDFWVTITN 442
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 23/124 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y+L + ATD
Sbjct: 1372 IRYEITNGNIGGAFAVKNMT------------GAIYV-AGPLDYETRKRYNLTLVATDT- 1417
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+N+A+T + ++++D ND P F + Y + ++ + N+ I V A D
Sbjct: 1418 -VNEAKTTIIINIIDVNDLPPKFERNSY---IATIEEEFDRNLPM-----KILQVKANDG 1468
Query: 148 DGDK 151
D D+
Sbjct: 1469 DKDR 1472
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 17/125 (13%)
Query: 75 AQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSH 132
A Y +TA D +G E T+ + ++ND P+FSQ+VY +++ N
Sbjct: 746 AYYEFTVTAID-RGEPPKEGTATIRIYTKNKNDEKPMFSQQVY-------TPNVDENAG- 796
Query: 133 WKKFSSIGSVSATDADGDKVAYKL---AVPSNLVVIVPQTGELLLTGDPPS-DDVEYELT 188
+ + + +V A+D DGD V + A S VI TG + L P S D +YEL
Sbjct: 797 --RSTLVTTVVASDKDGDNVEFGFVGGASESGQFVIEKMTGVIRLHNGPISLDRDKYELN 854
Query: 189 VEAHD 193
V A D
Sbjct: 855 VTAVD 859
>gi|321459270|gb|EFX70325.1| hypothetical protein DAPPUDRAFT_300527 [Daphnia pulex]
Length = 2952
Score = 215 bits (547), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 129/322 (40%), Positives = 184/322 (57%), Gaps = 26/322 (8%)
Query: 2 ENSKSGTGV---KGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESK 58
EN+ +GT V GL ++ + + V++ I G + F ++ T + N T +
Sbjct: 57 ENAPAGTLVVFLDGLSVVAENGSQ-----VKFDIMSGGSD-GFRIEKVTESD-GNCTTNH 109
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ LVT +DRE Y LV+ A A V + V D NDN P+FS Y F
Sbjct: 110 TSARLVTRRPLDRELQPVYDLVVRAVSAHPPGTATCRVIISVDDVNDNRPIFSAPEYHFE 169
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDP 178
V + K+ IG V A DADGD ++L SN V++PQTGE++L DP
Sbjct: 170 V----------PTTAMKYDRIGRVKAVDADGDHAIFRLTSASNSFVMIPQTGEIILI-DP 218
Query: 179 --PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIE 236
PS + Y L V A D + P +PA+++++ Q+E + + H +
Sbjct: 219 QLPSSNRSYALQVTAKDRREPGWETEQPARIFIRTKQ---QEEGEGDVKAADQQEHHNLV 275
Query: 237 KRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
KRR RA+RPTKRI+FSE DG EG+++FAL+K +E+E+FK+RD+NPW+TV+ NG+VRVK
Sbjct: 276 KRRAPRALRPTKRIEFSEADGAPEGKLMFALDKPSEKERFKVRDDNPWVTVEPNGNVRVK 335
Query: 297 KRWDFEELGPEKTIDFWVTINN 318
++WD+EELGPEKTIDFWVTI N
Sbjct: 336 RKWDYEELGPEKTIDFWVTITN 357
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 15/88 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT+GN FA+KN T G + V +G +D E +Y L + A+D
Sbjct: 1285 IRYEITRGNLGGAFAVKNMT------------GAIYV-AGPLDYETRKRYDLTLVASD-- 1329
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVY 115
+N++ T V + + D ND P+F+Q +Y
Sbjct: 1330 SLNESVTRVVILIKDSNDLPPIFNQTMY 1357
>gi|61162135|dbj|BAD91056.1| Cj-cadherin [Caridina japonica]
Length = 3000
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 135/326 (41%), Positives = 184/326 (56%), Gaps = 40/326 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT ++GL + A + V+Y + G+ FAL H +
Sbjct: 137 ENLPPGTELQGLEEMEAMGEED----VKYELIGGH--SVFAL-----HHVGGMP------ 179
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+VT +DRE Y L + A D +G++ A+ + V + D ND++PVF+Q ++ F V
Sbjct: 180 TIVTKKALDREAQDTYKLTLRAYDREGMDTADAKIIVHIHDMNDHAPVFTQSMFYFFV-- 237
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD 181
N+S +F IG V A D DGDKV Y+LA PSN I+PQTGE++L +PP
Sbjct: 238 -----PLNIS---RFDIIGRVVAHDGDGDKVVYRLAYPSNTFTIIPQTGEIMLI-EPPET 288
Query: 182 DVEYELTVEAHDLQSPSRYAREPAQVWLQFNSP---VLQDEQLLQMIDRKSEAPHRIEKR 238
V YEL +EA D + P+ Y+ A+ ++F P + E ID H + KR
Sbjct: 289 MV-YELELEAFDKRKPTLYSDNLAKAHIEFRYPSDSLFTGES--NDIDFDIYPDHALSKR 345
Query: 239 -----RVTRA-VRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGD 292
RV R +R TK + FSE DG +EG++VF LEKE + E FKIRD+NPW+ VD G
Sbjct: 346 SAANSRVKRGQLRHTKELSFSEADGAVEGKVVFQLEKEIQWENFKIRDDNPWVEVDLGGA 405
Query: 293 VRVKKRWDFEELGPEKTIDFWVTINN 318
VRVKK+WD+EELGPEKTIDFWVTI+N
Sbjct: 406 VRVKKKWDYEELGPEKTIDFWVTISN 431
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 61/125 (48%), Gaps = 23/125 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT GN FA+KN T G + V +G +D E +Y L + ATD
Sbjct: 1361 IRYEITNGNIGGAFAVKNMT------------GAIYV-AGPLDYETRKRYELTLVATD-- 1405
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+N+A T V + + D ND P F + +Y + + +S N +S K V+ATD
Sbjct: 1406 SVNEATTKVIIHIADVNDRPPEFDRPIYEATILEEQSE-NLPISLIK-------VTATDG 1457
Query: 148 DGDKV 152
D D+V
Sbjct: 1458 DRDRV 1462
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 85/182 (46%), Gaps = 44/182 (24%)
Query: 28 VRYSITQG-NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE-EVAQY-SLVITAT 84
VRYSI Q N T +P T E+ T+ DRE E ++ S+ + AT
Sbjct: 917 VRYSIVQQPNQKGTKFTVDPETGEV------------TTNKVFDREGEDGKFVSVTVKAT 964
Query: 85 D-----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSI 139
D ++G+ TV++ D NDN P+F ++ Y V ++K N ++I
Sbjct: 965 DNGDPSLEGV----CSFTVEITDINDNPPLFDRQKY---VENVKQDTNVG-------TNI 1010
Query: 140 GSVSATDADGDK---VAYKL---AVPSNL--VVIVPQTGELLLTGDPPSDDVEYELTVEA 191
VSA+D D D + Y L A P++L I P++G + L P D +YE+ V+A
Sbjct: 1011 LRVSASDEDADNNGAILYNLTAAATPADLEYFEIQPESGWITLK--KPLDRGDYEVVVQA 1068
Query: 192 HD 193
D
Sbjct: 1069 TD 1070
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 58/125 (46%), Gaps = 17/125 (13%)
Query: 75 AQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSH 132
A Y +TATD KG E T+ + ++ND P FSQ+VY +++ N
Sbjct: 735 AYYEFTVTATD-KGEPPKEGTATIRIYTKNKNDEEPKFSQQVY-------TPNVDENAG- 785
Query: 133 WKKFSSIGSVSATDADGDKVAYKLA---VPSNLVVIVPQTGEL-LLTGDPPSDDVEYELT 188
++ + +V A+D DGD V + S VI TG + L G+ D +YEL
Sbjct: 786 --PYTLVTTVVASDKDGDNVEFGFVGQEKESGQFVIEKMTGVIRLRQGEISLDRDKYELN 843
Query: 189 VEAHD 193
V A D
Sbjct: 844 VTAVD 848
>gi|61162140|dbj|BAD91058.1| At-cadherin [Achaearanea tepidariorum]
Length = 2971
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 174/327 (53%), Gaps = 39/327 (11%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN +GT V+GL + A+S P+ + Y+ GN+ F++ + + +S +
Sbjct: 113 ENEPAGTVVEGLDRMFATSD--PYHPIIYTFVSGNEEDAFSIVQLPINNLSSS------I 164
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
++ T+ +DRE Y LVI ATDV+ N A+ VT+ V + NDN+PV + +Y F + +
Sbjct: 165 VIRTNRVLDRERQEVYDLVIRATDVQEANSADAQVTIQVNNVNDNAPVPERTIYEFRIPE 224
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD 181
+ +S +G+VSA DADGDK Y L + I+P+TG++LL P
Sbjct: 225 ----------DTELYSIVGNVSAYDADGDKPVYHLVSRHPVFAIIPKTGQILLIAAPELK 274
Query: 182 DVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQ------DEQLLQMIDRKSEAPHRI 235
Y+L V D P R + P V+++ S L D +Q++ R+
Sbjct: 275 --TYKLNVRTQDTAKPPRIS-APFSVYIEVYSEELPLESENVDSNDIQLLSRQK------ 325
Query: 236 EKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRV 295
R+VRPTK ++ ETDG G+++F L+K+ +E +K+ + W+ VD +GDV++
Sbjct: 326 ------RSVRPTKSYEYKETDGSKPGKVMFQLDKKHPQETYKMENPIKWVDVDSSGDVKI 379
Query: 296 KKRWDFEELGPEKTIDFWVTINNQATN 322
K+ WD+E+LG EKTIDFWV + N
Sbjct: 380 KEPWDYEQLGKEKTIDFWVFVTGPNIN 406
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 15/101 (14%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
I V + K +RY ITQGN FA+KN T G + V +G +D E
Sbjct: 1317 ITVTAKDKDESSRIRYEITQGNIGGAFAVKNET------------GAIYV-AGPLDYESR 1363
Query: 75 AQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
+Y L + A+D +N+ T V + + D NDN P+F + Y
Sbjct: 1364 KEYKLRLVASD--NLNENHTTVVIHIKDVNDNPPMFDRPTY 1402
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 65/130 (50%), Gaps = 26/130 (20%)
Query: 28 VRYSI-TQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQ---YSLVITA 83
+RY++ QG TF + PTT GV+ + D+D E++ Q YSL++TA
Sbjct: 567 IRYTLRAQGKGAGTFNI-GPTT-----------GVVKLAK-DLDYEDLRQPKSYSLIVTA 613
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
T+ G +T+ V D NDN+P F Y+ +++ +V+ +SI VS
Sbjct: 614 TEDSGGFSTSVELTIKVTDVNDNAPRFELPDYQ------AHNVDEDVAVG---TSILQVS 664
Query: 144 ATDADGDKVA 153
A+D D +K A
Sbjct: 665 ASDMDQNKNA 674
>gi|61162132|dbj|BAD91055.1| Af2-cadherin [Artemia franciscana]
Length = 3005
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/262 (39%), Positives = 149/262 (56%), Gaps = 30/262 (11%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHV--TVDVLDENDNSPVFSQKVYR 116
GV ++T+ +DRE +Y L+I A GI + V T+ + D N+N P F+++VY
Sbjct: 160 GGVSVLTNESLDREMKGKYHLLILAY-AHGITSEISSVPLTIVIEDVNNNEPRFTEEVYE 218
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTG 176
F+ S + +G+V A D DG +V Y LA SN VI PQTG + +T
Sbjct: 219 FLYEFTAS----------RPLRVGNVKAWDPDGTEVTYFLAERSNNAVIEPQTGSIFITN 268
Query: 177 DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIE 236
+ E+ + A D PSR PA+ + F +K +
Sbjct: 269 ---PELRSLEILIGARDRGVPSRNTSVPARARVTFY--------------KKEHGVVKRH 311
Query: 237 KRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
+R+ R R KR++FSE+DG EG+++F LEKE+ERE+FK++DENPWITV+ NG+VRVK
Sbjct: 312 AKRIPRGSRTMKRLEFSESDGGTEGKLMFQLEKESERERFKLKDENPWITVEPNGNVRVK 371
Query: 297 KRWDFEELGPEKTIDFWVTINN 318
K+WD+EELGP+K IDF++TI N
Sbjct: 372 KKWDYEELGPDKNIDFYITITN 393
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 30/143 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT+GN FA+KN T G + V +G +D E +Y L + A+D
Sbjct: 1322 IRYEITRGNIGGAFAVKNMT------------GAIYV-AGPLDYETRKRYELTLVASD-- 1366
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+N+ T VT+++ D ND P F Q Y +++ +S F + V+ATD
Sbjct: 1367 SLNEVVTTVTINIADANDLPPSFDQSTY-------STTIQEELSDPLPFKLL-KVTATDG 1418
Query: 148 DGDKVAYKLAVPSNLVVIVPQTG 170
D D+ P N+V + G
Sbjct: 1419 DKDR-------PQNIVYFLTGQG 1434
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 33/190 (17%)
Query: 28 VRYSITQ--GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQ---YSLVIT 82
+RY++ G TF + PTT +R + E +D E++ Q YSLV+T
Sbjct: 557 IRYTLKAQGGQGAGTFTI-GPTTGNVRLAKE------------LDFEDLRQPHIYSLVVT 603
Query: 83 ATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSH-WKKFSSIGS 141
AT+ G +T+ V D NDN+P F Y+ + NV +SI
Sbjct: 604 ATEDSGGFSTSVELTIRVTDVNDNAPKFELPDYQ----------SHNVEEDLPIGTSILK 653
Query: 142 VSATDAD-GDKVAYKLAVPSNLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQSPS 198
V ATDAD GD + +V S+ V Q G + D +++ YE TV A D P
Sbjct: 654 VKATDADSGDNAEIEYSV-SDDNFQVDQKGVISNARQLDADNNNAYYEFTVTAKDKGEPP 712
Query: 199 RYAREPAQVW 208
+ +++
Sbjct: 713 KTGTATVRIY 722
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 39/167 (23%)
Query: 78 SLVITATD-----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSH 132
S+ + ATD ++G+ TV++ D NDN P+F ++ Y V +
Sbjct: 919 SVTVKATDQGDPSLEGV----CSFTVEITDVNDNPPLFDRQKY--------------VEN 960
Query: 133 WKKFSSIGS----VSATDADGDK---VAYKLAVPSN-----LVVIVPQTGELLLTGDPPS 180
K+ ++IG+ VSA+D D D + Y L P N I+P++G ++LT P
Sbjct: 961 VKQDTTIGTNILRVSASDEDADNNGAIIYNLTAPYNPSDIDYFSILPESGWIVLTR--PL 1018
Query: 181 DDVEYELTVEAHDLQSP--SRYAREPAQVWLQFNSPVLQDEQLLQMI 225
D Y+L A D P SR V + N+P + D+ + I
Sbjct: 1019 DRETYKLEAIAMDRGFPPLSRTVEVQIDVVDRANNPPVWDQTVYGPI 1065
>gi|241735377|ref|XP_002413936.1| hypothetical protein IscW_ISCW022281 [Ixodes scapularis]
gi|215507790|gb|EEC17244.1| hypothetical protein IscW_ISCW022281 [Ixodes scapularis]
Length = 421
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/299 (37%), Positives = 157/299 (52%), Gaps = 34/299 (11%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
VRY I G+D+ F L +P + RNST ++L +DRE +Y L I A
Sbjct: 154 VRYEIVSGDDDGAFHL-SPLS---RNSTR----LVLRARTPLDRETQNRYDLTIRA--FN 203
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G+ A T V V+VLD NDN PV ++ Y F V L+S + +S +G+VSATD+
Sbjct: 204 GLESARTRVVVEVLDVNDNDPVPERRSYTFRV-----PLSS-----EPYSIVGNVSATDS 253
Query: 148 DGDKVAYKLAVPSNLVVIVPQTGELLLT-GDPPSDDVEYELTVEAHDLQSPSRYAREP-A 205
DGD VA++L+ +VP+TGEL+LT G P Y+L V D +P R R P
Sbjct: 254 DGDAVAFRLSDRHPFFTMVPKTGELMLTRGLEPK---TYKLAVRLRDRGTPPR--RGPTV 308
Query: 206 QVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVF 265
V++ P DE S+ + RR + VRPTK + ETDG + VF
Sbjct: 309 AVYVDAFEP---DEAAPA----SSQEDSVVRIRRSSIIVRPTKSYLYKETDGRDVNKTVF 361
Query: 266 ALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
L+K+ E F++ + W+ V NGDV+VK++WD+E+L EK+IDFWV G
Sbjct: 362 TLDKKAVDETFELEKPDRWVHVSANGDVKVKEKWDYEQLDKEKSIDFWVLARPAGNPSG 420
>gi|391338388|ref|XP_003743540.1| PREDICTED: neural-cadherin-like [Metaseiulus occidentalis]
Length = 3036
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 102/295 (34%), Positives = 152/295 (51%), Gaps = 36/295 (12%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
+SI +GN+N TF L T ++ +++S+ +DREE +LVI A G
Sbjct: 199 FSIVEGNENGTFKLVKYTRRRVKIASQSR----------LDREEKEIRNLVIKAQ--AGP 246
Query: 90 NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
A +VTV V DENDN P+ Q Y F V + + + IG V DADG
Sbjct: 247 EVAYVNVTVRVKDENDNPPIPLQNSYEFRV----------RADAEPQTVIGQVEGKDADG 296
Query: 150 DKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYEL-----TVEAHDLQSPSRYAREP 204
D++ YKL + L+ +VP+TG+L+LT P E+E T+ D+ PS +
Sbjct: 297 DQIIYKLVERNPLIAMVPKTGQLVLTRKPLE---EWERNSQLKTLAKEDILEPSDLESD- 352
Query: 205 AQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIV 264
+ V D + + D +S+ HR + ++RPTK F ETDG + V
Sbjct: 353 ---LKNLENTVDNDNRDGKREDEESK--HRSRRSTPLGSIRPTKSYKFKETDGSTPNKTV 407
Query: 265 FALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQ 319
F L+K+ E F++ N W+T+ NG+V+VK++WD+E+L EKTIDFWV + Q
Sbjct: 408 FTLDKKYTGESFELEAPNRWVTILANGEVKVKEKWDYEQLDKEKTIDFWVLVKQQ 462
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 83/194 (42%), Gaps = 38/194 (19%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
I V + K +RY ITQGN FA+KN T G + V +G +D E
Sbjct: 1377 ITVTAKDKDESSRIRYEITQGNIGGAFAVKNET------------GAIFV-AGPLDYETR 1423
Query: 75 AQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWK 134
+Y L + A+D +N+ T V + V D NDN+P+F + Y + + N+
Sbjct: 1424 KEYRLRLVASD--NLNENHTTVLIRVKDVNDNAPIFDRPTYD---AQIVEENDRNLPQ-- 1476
Query: 135 KFSSIGSVSATDADGDK---VAYKLA--------VPSNLVVIVPQTGELL----LTGDPP 179
I +V+ATD D D+ + Y L +N I TGE+ L D P
Sbjct: 1477 ---KILTVTATDGDRDRESDIVYFLTGQGVDNTDSENNKFAINQTTGEIYVLKPLDRDLP 1533
Query: 180 SDDVEYELTVEAHD 193
++ TV A D
Sbjct: 1534 HGRSQWRFTVFAED 1547
>gi|427779553|gb|JAA55228.1| Putative cadherin egf lag seven-pass g-type receptor [Rhipicephalus
pulchellus]
Length = 2970
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 135/255 (52%), Gaps = 22/255 (8%)
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+ L TS +DRE +Y L + A+D ++ A T + VDVLD NDN PV ++ Y F V
Sbjct: 117 LALRTSRPLDREHRRRYELNLRASD--DVDSALTRLLVDVLDVNDNDPVADREAYVFRVS 174
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLT-GDPP 179
+ ++ +G+VSA+DADGD V+++LA +VP+TGEL++T G P
Sbjct: 175 ----------RESEPYTIVGNVSASDADGDSVSFRLAERHPFFTVVPKTGELMVTRGLEP 224
Query: 180 SDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRR 239
Y + + D P R+ R A V + E R E P + RR
Sbjct: 225 K---SYLMALRVGDRGKPQRFGRTVA-----VKVEVFEPEPAPPPAQRSLETP-QTRVRR 275
Query: 240 VTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
T +RPTK F ET G + VF L+K+ E F++ + W+ V NGDVRVK++W
Sbjct: 276 STVTIRPTKTYRFEETKGRDVNKTVFTLDKKAVDETFELEKPDRWVYVSPNGDVRVKEKW 335
Query: 300 DFEELGPEKTIDFWV 314
D+E+L EK+IDFWV
Sbjct: 336 DYEQLDKEKSIDFWV 350
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 83/193 (43%), Gaps = 37/193 (19%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
I V + K +RY ITQGN FA+KN T G + V +G +D E
Sbjct: 1269 ITVTAKDKDESSRIRYEITQGNIGGAFAVKNET------------GAIYV-AGPLDYETR 1315
Query: 75 AQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWK 134
+++L + A+D + + T V + V D ND PVF Q Y +++ VSH
Sbjct: 1316 KEFNLTLVASDT--LYEGSTTVLIHVKDVNDLPPVFGQSSY-------VTTIEEEVSHNL 1366
Query: 135 KFSSIGSVSATDADGDK---VAYKLAV------PSN-LVVIVPQTGELL----LTGDPPS 180
I +V+ATD D D+ + Y L P N I TGE+ L D P
Sbjct: 1367 PM-KIMTVTATDGDKDRESLIVYFLTGQGVDEDPGNSKFAINTTTGEIYVLKPLDRDLPH 1425
Query: 181 DDVEYELTVEAHD 193
++ TV A D
Sbjct: 1426 GRSQWRFTVFAED 1438
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 26/130 (20%)
Query: 28 VRYSI-TQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQ---YSLVITA 83
+RY++ QG TF + PT SGV+ + ++D E++ Q YSL++TA
Sbjct: 519 IRYTLRAQGKGAGTFNI-GPT-----------SGVVKLAK-ELDYEDLRQPKSYSLIVTA 565
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
T+ G +T+ V D NDN+P F Y+ +++ +++ +SI VS
Sbjct: 566 TEDSGGFSTSVELTIKVTDVNDNAPRFELPDYQ------AHNVDEDIAVG---TSILQVS 616
Query: 144 ATDADGDKVA 153
ATD D + A
Sbjct: 617 ATDMDTGRNA 626
>gi|427781127|gb|JAA56015.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 1400
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 134/255 (52%), Gaps = 22/255 (8%)
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+ L TS +DRE +Y L + A+D ++ A T + VDVLD NDN PV ++ Y F V
Sbjct: 183 LALRTSRPLDREHRRRYELNLRASD--DVDSALTRLLVDVLDVNDNDPVADREAYVFRVS 240
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLT-GDPP 179
+ ++ +G+VSA+DADGD V+++LA +VP+TGEL++T G P
Sbjct: 241 ----------RESEPYTIVGNVSASDADGDSVSFRLAERHPFFTVVPKTGELMVTRGLEP 290
Query: 180 SDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRR 239
Y + + D P R+ R A V + E R E P RR
Sbjct: 291 K---SYLMALRVGDRGKPQRFGRTVA-----VKVEVFEPEPAPPPAQRSLETPQ-TRVRR 341
Query: 240 VTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
T +RPTK F ET G + VF L+K+ E F++ + W+ V NGDVRVK++W
Sbjct: 342 STVTIRPTKTYRFEETKGRDVNKTVFTLDKKAVDETFELEKPDRWVYVSPNGDVRVKEKW 401
Query: 300 DFEELGPEKTIDFWV 314
D+E+L EK+IDFWV
Sbjct: 402 DYEQLDKEKSIDFWV 416
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 26/125 (20%)
Query: 28 VRYSI-TQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQ---YSLVITA 83
+RY++ QG TF + PT SGV+ + + ++D E++ Q YSL++TA
Sbjct: 585 IRYTLRAQGKGAGTFNI-GPT-----------SGVVKL-AKELDYEDLRQPKSYSLIVTA 631
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
T+ G +T+ V D NDN+P F Y+ +++ +++ +SI VS
Sbjct: 632 TEDSGGFSTSVELTIKVTDVNDNAPRFELPDYQ------AHNVDEDIAVG---TSILQVS 682
Query: 144 ATDAD 148
ATD D
Sbjct: 683 ATDMD 687
>gi|364506175|pdb|3UBH|A Chain A, Crystal Structure Of Drosophila N-Cadherin Ec1-4
Length = 419
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 63/87 (72%), Positives = 74/87 (85%)
Query: 238 RRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKK 297
RRVTRAVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD+NPW+TV+ NG VRVKK
Sbjct: 2 RRVTRAVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNPWVTVETNGAVRVKK 61
Query: 298 RWDFEELGPEKTIDFWVTINNQATNGG 324
+WD+EELGPEKTIDFWV I N N G
Sbjct: 62 KWDYEELGPEKTIDFWVIITNMGHNAG 88
>gi|364506172|pdb|3UBF|A Chain A, Crystal Structure Of Drosophila N-Cadherin Ec1-3, I
gi|364506173|pdb|3UBG|A Chain A, Crystal Structure Of Drosophila N-Cadherin Ec1-3, Ii
gi|364506174|pdb|3UBG|B Chain B, Crystal Structure Of Drosophila N-Cadherin Ec1-3, Ii
Length = 316
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 58/82 (70%), Positives = 69/82 (84%)
Query: 243 AVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
AVRPTKRI+F+E DG+ EG+ VF LEKET++E FKIRD+NPW+TV+ NG VRVKK+WD+E
Sbjct: 2 AVRPTKRIEFTEADGDTEGKSVFQLEKETDKETFKIRDDNPWVTVETNGAVRVKKKWDYE 61
Query: 303 ELGPEKTIDFWVTINNQATNGG 324
ELGPEKTIDFWV I N N G
Sbjct: 62 ELGPEKTIDFWVIITNMGHNAG 83
>gi|427791591|gb|JAA61247.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 1124
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 50/77 (64%)
Query: 238 RRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKK 297
RR T +RPTK F ET G + VF L+K+ E F++ + W+ V NGDVRVK+
Sbjct: 26 RRSTVTIRPTKTYRFEETKGRDVNKTVFTLDKKAVDETFELEKPDRWVYVSPNGDVRVKE 85
Query: 298 RWDFEELGPEKTIDFWV 314
+WD+E+L EK+IDFWV
Sbjct: 86 KWDYEQLDKEKSIDFWV 102
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 15/101 (14%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
I V + K +RY ITQGN FA+KN T G + V +G +D E
Sbjct: 1021 ITVTAKDKDESSRIRYEITQGNIGGAFAVKNET------------GAIYV-AGPLDYETR 1067
Query: 75 AQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
+++L + A+D + + T V + V D ND PVF Q Y
Sbjct: 1068 KEFNLTLVASDT--LYEGSTTVLIHVKDVNDLPPVFGQSSY 1106
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 26/125 (20%)
Query: 28 VRYSI-TQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQ---YSLVITA 83
+RY++ QG TF + PT SGV+ + + ++D E++ Q YSL++TA
Sbjct: 271 IRYTLRAQGKGAGTFNI-GPT-----------SGVVKL-AKELDYEDLRQPKSYSLIVTA 317
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
T+ G +T+ V D NDN+P F Y+ +++ +++ +SI VS
Sbjct: 318 TEDSGGFSTSVELTIKVTDVNDNAPRFELPDYQ------AHNVDEDIAVG---TSILQVS 368
Query: 144 ATDAD 148
ATD D
Sbjct: 369 ATDMD 373
>gi|427795051|gb|JAA62977.1| Putative cadherin egf lag seven-pass g-type receptor, partial
[Rhipicephalus pulchellus]
Length = 2741
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 50/77 (64%)
Query: 238 RRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKK 297
RR T +RPTK F ET G + VF L+K+ E F++ + W+ V NGDVRVK+
Sbjct: 20 RRSTVTIRPTKTYRFEETKGRDVNKTVFTLDKKAVDETFELEKPDRWVYVSPNGDVRVKE 79
Query: 298 RWDFEELGPEKTIDFWV 314
+WD+E+L EK+IDFWV
Sbjct: 80 KWDYEQLDKEKSIDFWV 96
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 83/193 (43%), Gaps = 37/193 (19%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
I V + K +RY ITQGN FA+KN T G + V +G +D E
Sbjct: 1040 ITVTAKDKDESSRIRYEITQGNIGGAFAVKNET------------GAIYV-AGPLDYETR 1086
Query: 75 AQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWK 134
+++L + A+D + + T V + V D ND PVF Q Y +++ VSH
Sbjct: 1087 KEFNLTLVASDT--LYEGSTTVLIHVKDVNDLPPVFGQSSY-------VTTIEEEVSHNL 1137
Query: 135 KFSSIGSVSATDADGDK---VAYKLAV------PSN-LVVIVPQTGELL----LTGDPPS 180
I +V+ATD D D+ + Y L P N I TGE+ L D P
Sbjct: 1138 PM-KIMTVTATDGDKDRESLIVYFLTGQGVDEDPGNSKFAINTTTGEIYVLKPLDRDLPH 1196
Query: 181 DDVEYELTVEAHD 193
++ TV A D
Sbjct: 1197 GRSQWRFTVFAED 1209
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 26/130 (20%)
Query: 28 VRYSI-TQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQ---YSLVITA 83
+RY++ QG TF + PT SGV+ + ++D E++ Q YSL++TA
Sbjct: 290 IRYTLRAQGKGAGTFNI-GPT-----------SGVVKLAK-ELDYEDLRQPKSYSLIVTA 336
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
T+ G +T+ V D NDN+P F Y+ +++ +++ +SI VS
Sbjct: 337 TEDSGGFSTSVELTIKVTDVNDNAPRFELPDYQ------AHNVDEDIAVG---TSILQVS 387
Query: 144 ATDADGDKVA 153
ATD D + A
Sbjct: 388 ATDMDTGRNA 397
>gi|345548553|gb|AEO12553.1| Lefftyrin, partial [Oscarella carmela]
Length = 14757
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 117/251 (46%), Gaps = 28/251 (11%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHV--TVDVLDENDNSPVFSQKVY 115
SG L ++ ++DRE +YSL +TA D +G T V TVDVLD NDN+PVFS++ Y
Sbjct: 2491 SSGTLTLSVANLDRELKTRYSLTVTARD-RGSPALLTSVGVTVDVLDINDNAPVFSKQRY 2549
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGEL 172
VG++ + K ++I ++ATD D +V Y+L PSN + + P TG L
Sbjct: 2550 ---VGNVSEA-------ASKGTAILGLTATDLDSGLNGQVRYRLVPPSNDLDVNPGTGVL 2599
Query: 173 LLTGDPPSDDV-EYELTVEAHDLQSPSRYAREPAQVWLQ-FNSPVLQDEQLLQMIDRKSE 230
G + +Y+L VEA DL PSR + ++ ++ N Q L +
Sbjct: 2600 STKGTLDRESTSQYDLIVEAFDLGVPSRSSNSSVRIMVEDVNDSPPTFSQFLYVATISEA 2659
Query: 231 APHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDEN 290
AP + V+ + ID D +++L + F+I + I ++
Sbjct: 2660 APAGAD-------VQIVEAID---GDAGSNAVFLYSLRVSLDSSAFRINGRSGQIQLNRK 2709
Query: 291 GDVRVKKRWDF 301
D K +DF
Sbjct: 2710 VDRESKDVYDF 2720
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 90/215 (41%), Gaps = 37/215 (17%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V ++ + + +V YSI GN + F + N T+ E
Sbjct: 1323 ENVAIGTSV--FAVVASDDDSGLNAIVSYSIVAGNSDFAFVI-NSTSGE----------- 1368
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
L +DRE+ + Y L +TAT+ + V V +LD NDN+P + Y V
Sbjct: 1369 -LTVGNSLDREKTSSYRLTVTATNSFATFGRSSSADVIVHILDVNDNTPQLEKANYEASV 1427
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTG 176
V + +S+ +V ATD D V Y L+ S+L I +G L +TG
Sbjct: 1428 ----------VENSPTGTSVLTVKATDDDIGSNGAVTYSLSPSSSLFNIDNTSGVLEVTG 1477
Query: 177 DPPSDDVE----YELTVEAHDLQSPSRYAREPAQV 207
S D E Y L V A D PSR A A V
Sbjct: 1478 ---SLDREKQSVYSLNVIAVDGGDPSRTATARATV 1509
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 91/219 (41%), Gaps = 52/219 (23%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ LV YSI GN + F + + +G + V +DRE V Y L I A+
Sbjct: 6233 NGLVSYSIRSGNRDGQFTV------------DHSNGQIAVLK-PLDREAVNSYVLTILAS 6279
Query: 85 DVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
D +N + V++ VLD NDN+PVF+ K R L NV+ + + V
Sbjct: 6280 DFASVNPMSSSATVSIQVLDSNDNAPVFATKSQRV-------DLFENVTVG---TLVALV 6329
Query: 143 SATDAD---GDKVAYKLAV--PSNLVVIVPQTGELLL--TGDPPSDDVEYELTVEAHDLQ 195
+ATD D VAY + P +I TG L + T D S EY+L V A D
Sbjct: 6330 NATDRDLGLNGVVAYMIETGDPDGRFLIDSVTGALTVAQTLDRES-KAEYQLEVLAEDQG 6388
Query: 196 SPS-------------------RYAREPAQVWLQFNSPV 215
PS R++ P ++L N PV
Sbjct: 6389 IPSLQSTASITVNVLDVNDNAPRFSVPPGSLFLNENEPV 6427
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 111/294 (37%), Gaps = 63/294 (21%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ LV YS GN F + + S L+ + +D E YSL I A
Sbjct: 1031 NALVSYSFVNGNVGQAFGINS-------------SNGLVTVAASLDFETRPAYSLTIEAV 1077
Query: 85 DVKGINKAETHVT--VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
D + + VT V V D ND++P FS VYR ++ N S FS + +
Sbjct: 1078 DGNSVKPLSSTVTLNVAVTDSNDHAPSFSANVYRAVL---------NESAGVGFSVL-QL 1127
Query: 143 SATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYE------LTVEAHD 193
+A+D D ++A+ L V ++ G LL T + +++YE L V+ D
Sbjct: 1128 TASDPDVGTNGQIAFSL-VSGDIGDFNLSAGGLLKT----ARNLDYERRQTYHLVVQVED 1182
Query: 194 LQSPSRYAREPAQVWL---QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRI 250
P V + N+PV + ++ P + V ++ T R
Sbjct: 1183 FGFPQHSGTAAVTVEVLDENDNAPVFNTTTVF------ADVPENVATGTVVETLKATDR- 1235
Query: 251 DFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEEL 304
D G I +++ KF D+ G+V V DFE++
Sbjct: 1236 -----DSGSNGDISYSIVSGNSEGKF---------VADKTGNVIVVASLDFEKI 1275
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 95/207 (45%), Gaps = 36/207 (17%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+E++K GT + I V S + + +V + IT GN+ S S SG
Sbjct: 9915 IESAKLGTAIG--TIEVTSRNASGYSVV-FRITAGNEEF--------------SVNSTSG 9957
Query: 61 -VLLVTSGDIDREEVAQYSLVITA---TDVKGINKAETHVTVDVLDENDNSPVFSQKVYR 116
++L+ S +DRE+V Y LV+ A + G+ A V + VLD NDNSP+ S
Sbjct: 9958 DIILIDS--LDREKVVSYRLVVEAETRSSFGGVAAASVEVNITVLDANDNSPIAS----- 10010
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVI-VPQTGEL 172
+VG+ LNS+ I + A+D D K+ Y+++ + L V G L
Sbjct: 10011 -VVGNASVQLNSSSPVGVL---IAQILASDNDAGPNGKLLYRISSGNFLESFNVSDDGAL 10066
Query: 173 LLTGDPPSDDVEYELTVEAHDLQSPSR 199
L P+ + + +L V+ D +P R
Sbjct: 10067 RLAKRLPNTNKDTDLVVQVLDNGNPVR 10093
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 115/290 (39%), Gaps = 55/290 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
+ Y+IT G D +F + N T GV+ + + +D E V Y LVITA +
Sbjct: 8393 ILYAITSG-DQGSFDVNNET------------GVITLAAA-LDFERVENYQLVITARNPS 8438
Query: 86 -VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
I V + VLD NDN+P+F Q YR+ + NV+ K SV A
Sbjct: 8439 SSSSILPRSATVNIAVLDVNDNAPIFDQMFYRW-------EILENVTIGKAGF---SVQA 8488
Query: 145 TDADG---DKVAYKLAVPSNLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQSPSR 199
TDAD + Y L S+ I + G+L L T D + Y LTV A D SP
Sbjct: 8489 TDADSGINSLIRYSLTDASSTFTIDHRFGDLSTLKTLDRET-QASYNLTVLAVDSGSPRL 8547
Query: 200 YAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTR----AVRPTKRIDFSET 255
L +D AP + V R A + + S T
Sbjct: 8548 TGTATVAAIL---------------LDVNDNAPTFTQSVFVGRVEENATLGSSVLLLSAT 8592
Query: 256 DGE--MEGRIVFALEKETEREKFKIRD-ENPWITVDENGDVRVKKRWDFE 302
D + + + F++ E F++ D + + V+ + D +KR FE
Sbjct: 8593 DRDTGLNADVTFSILSGDEDGAFRLSDVTSGLLVVNGSLDRESRKRHVFE 8642
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 12/92 (13%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYR 116
+SG + V +G +DRE +Y+L + D + AE V + + D NDNSPVF +Y
Sbjct: 4819 QSGQIFV-NGSLDREMSPRYTLTVKVNDFGFPSLSAEAQVNITIADVNDNSPVFETLLYD 4877
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
F SL NVS S++G+V ATD D
Sbjct: 4878 F-------SLYENVSVG---STLGTVKATDDD 4899
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 128/299 (42%), Gaps = 60/299 (20%)
Query: 19 SSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYS 78
+ K+ V Y I +G +N ++A+ +GV+ + + +DRE V Y+
Sbjct: 4164 TGEKNGDVAVSYEI-EGTENGSYAIN-------------ATGVIFLLAM-LDREAVDLYN 4208
Query: 79 LVITATDVKGIN----KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWK 134
L + A+ + G + ++ VTV VLD ND+SP+FS +Y+F+V + +++V
Sbjct: 4209 LTVAAS-IPGSDGRFLRSSAAVTVVVLDVNDHSPIFSDFLYKFLVSE-----DASVG--- 4259
Query: 135 KFSSIGSVSATDADGDKVAYKLAVPSNLVV--------IVPQTGELLLTGDPPSDDVE-Y 185
SS+G V A D + V A+ S V +G + + ++V +
Sbjct: 4260 --SSVGRVEAIDT--NDVGVNAAIKSYRFTSGNSRNHFSVSSSGIIEVARQLDHENVSVF 4315
Query: 186 ELTVEAHDLQSPSRYAREPAQVWLQF-----NSPVLQDEQLLQMIDRKSEAPHRIEKRRV 240
LT+EA D PS A A + +Q ++PV S+ + +
Sbjct: 4316 NLTIEADDSGLPSLTAT--AALTIQIGNVNEHAPVF------------SQPEYEVSIYET 4361
Query: 241 TRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
R+ S+ D GR+ ++L + E F + + +T + D +K+++
Sbjct: 4362 AGLGTSIVRVSASDADDGSSGRVSYSLVEGNENGTFAVDAVSGIVTTTASLDYEMKRKF 4420
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 22/155 (14%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-----KAETHVTVDVLDENDNSP 108
S ++ SG + VT+ +DRE + V+ + N A V V + D NDNSP
Sbjct: 2381 SVDASSGSI-VTNTSLDREAPGVPTSVLVRVEASNRNASPALSAVVPVFVTIEDVNDNSP 2439
Query: 109 VFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVI 165
VF + Y F V ++ ++ F+ +G VSATD D ++ Y L PS + I
Sbjct: 2440 VFDEAAYVFNVTEMAAA----------FTVLGRVSATDKDSGSNGQILYSLT-PSGVFQI 2488
Query: 166 VPQTGELLLTGDPPSDDVE--YELTVEAHDLQSPS 198
+G L L+ +++ Y LTV A D SP+
Sbjct: 2489 GRSSGTLTLSVANLDRELKTRYSLTVTARDRGSPA 2523
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 66/149 (44%), Gaps = 26/149 (17%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
+ +L + S + V Y I GN TFAL++ EI V GD+D E
Sbjct: 6007 ITVLASDSDVGENGSVTYQIVGGNSGSTFALRSRGKGEI------------VAVGDLDYE 6054
Query: 73 EVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
+ ++L + A D + + V V +L+ NDN P F+ ++LN +S
Sbjct: 6055 DRTNFTLFVEARDGGSPVRSSTVPVYVSILNVNDNRPQFT-----------PATLNVKIS 6103
Query: 132 HWK-KFSSIGSVSATDAD-GDKVAYKLAV 158
S I +VSA+DAD GD + +V
Sbjct: 6104 EAAVPGSQITTVSASDADSGDNAVLQYSV 6132
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 14/85 (16%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ V+YSIT+GN N TF++ NP EI T+ +DRE VA YSL + AT
Sbjct: 5114 NAFVKYSITEGNANGTFSV-NPFLGEIE------------TNRALDRENVAAYSLKVLAT 5160
Query: 85 DVKGIN-KAETHVTVDVLDENDNSP 108
D + + V V V D ND +P
Sbjct: 5161 DGGTPSLSSSVDVIVRVTDVNDKAP 5185
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 76/179 (42%), Gaps = 37/179 (20%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y++T+GN + F++ + NS ++REE Y L + A D G
Sbjct: 4597 YNLTKGNFDGVFSISQTGRISVSNS--------------LNREETGFYRLTVAAID--GG 4640
Query: 90 NKAETH---VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSI-GSVSAT 145
+ A T + V+VLD NDN P F Q Y F NVS S+ G+V A
Sbjct: 4641 SPALTGNSIIAVNVLDVNDNDPRFQQAKYVF-----------NVSEDALIGSVAGAVGAV 4689
Query: 146 DAD-GDKVAYKLAVPSN--LVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSPSR 199
D D G K + PS+ + P G + ++G D D V V A D +PSR
Sbjct: 4690 DIDSGLNGQVKYSAPSSGRYFSVDPANGIMTVSGSLDRVKDPV-ITFAVTATDSGAPSR 4747
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 25/160 (15%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH 95
+DN ++ ++ T NST SGV+ T+ +DRE A Y+L + ATD G AE
Sbjct: 8706 DDNVSYRFRDSVTDFTLNST---SGVV-TTARALDRETKAIYNLTVIATD--GARSAEVT 8759
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG-SVSATDAD---GDK 151
+ V D+NDN+P F+ K YR +NVS ++ + SA+D D ++
Sbjct: 8760 AIITVQDDNDNAPEFA-KSYR-----------ANVSESAPVGTVVLTASASDRDVGINEE 8807
Query: 152 VAYKLAVPSNLVVIVPQTGELLLTGD--PPSD-DVEYELT 188
V+Y + S+ + TG L + D P S + +ELT
Sbjct: 8808 VSYAVGPLSDFFEVNSTTGVLTVARDLKPLSGRSLTFELT 8847
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 35/201 (17%)
Query: 39 HTFALKN--PTTHEIRNSTESKSGVLLVTSGDI------DREEVAQYSLVITATD----V 86
FA N TT+ +N+ S + ++ +GD+ DRE V +YS I AT V
Sbjct: 10133 QVFAFSNFSNTTYNFKNTGNSSTFIIHQLTGDVIVNEKLDRETVDKYSYEIEATSFDPIV 10192
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+ + TV VLD NDN P+F Q Y V + S++ + SA D
Sbjct: 10193 DQVASSFAKFTVTVLDVNDNKPLFEQSGYNVSVSE----------DVDVGSTVFTASAAD 10242
Query: 147 ADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSPSR 199
D + V Y++ S+ I GE+ + S D E + LT+ A D+ +
Sbjct: 10243 NDEGRNAIVVYEIVSGSSSFAINTTAGEVTVIN---SLDREVQSNFVLTIRASDILNGLF 10299
Query: 200 YAREPAQVWL---QFNSPVLQ 217
++ Q+ L N PV+Q
Sbjct: 10300 FSETILQISLVDVNDNGPVIQ 10320
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 73/182 (40%), Gaps = 32/182 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I GN+ A+ T G L V +DRE QY I ATD+
Sbjct: 6553 VVYEIVGGNEESVVAVNRST------------GALTVVR-SLDRERTDQYRFRIKATDLG 6599
Query: 88 GINK--AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSI-GSVSA 144
A V + V D NDN PVF +SS + ++ SI SVSA
Sbjct: 6600 SPPSLPAYAFVNLTVEDVNDNPPVFD-----------RSSYQTRITEGTDVGSIVASVSA 6648
Query: 145 TDADGDK---VAYKLAVPSNLVV--IVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSR 199
+DAD V Y + + L V IV +GE+ L P + L ++A D PS
Sbjct: 6649 SDADSGSNGIVTYSIVSGNKLNVFEIVASSGEIKLLSPFPRHVSLFSLVLQASDGGLPSL 6708
Query: 200 YA 201
A
Sbjct: 6709 KA 6710
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV + +DRE V Y+L I A D G N V + V D NDN PVF + +YRF V +
Sbjct: 3880 LVLNSSLDREVVDFYNLTILAVDEVG-NTGTALVQITVEDINDNPPVFERDIYRFSVAE 3937
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 98/230 (42%), Gaps = 39/230 (16%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS G V L + + LVRY ++ GN TF++ ++ SG
Sbjct: 4043 LENSTVGQFV--LSVQAEDVDSGANGLVRYELSSGNVGGTFSI------------DAVSG 4088
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDEN--DNSPVFSQKVYRF- 117
+ T+ +D E Y + + A D G + TV+V N D P+F Q VY+F
Sbjct: 4089 DIF-TALSLDFETRESYRMTVVARD-GGSPSLSSSSTVEVNINNLIDTPPLFDQDVYKFS 4146
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSAT--DADGD-KVAYKLAVPSNLVVIVPQTGELLL 174
I+ D KS S +G VSA + +GD V+Y++ N + TG + L
Sbjct: 4147 ILEDRKSR-----------SFVGQVSAKTGEKNGDVAVSYEIEGTENGSYAINATGVIFL 4195
Query: 175 TGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVW---LQFN--SPVLQD 218
+ V+ Y LTV A S R+ R A V L N SP+ D
Sbjct: 4196 LAMLDREAVDLYNLTVAASIPGSDGRFLRSSAAVTVVVLDVNDHSPIFSD 4245
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 52/95 (54%), Gaps = 11/95 (11%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKV 114
++ SGVL VT G +DRE+ + YSL + A D ++ T TV V D NDN+P FS+ +
Sbjct: 1467 DNTSGVLEVT-GSLDREKQSVYSLNVIAVDGGDPSRTATARATVTVADANDNTPRFSRSL 1525
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
Y V + ++ S V +VSATDAD
Sbjct: 1526 YAAGVSE-SVAVGSTVPV--------TVSATDADA 1551
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 103/264 (39%), Gaps = 44/264 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN +F + H + +D E V YSL+I+A+D
Sbjct: 4906 ILYSIESGNTRDSFDVGRRNGH-------------ITLQRAVDYESVTNYSLIISASDGG 4952
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+ T V+V VLD NDN PVF + +K N+ VS +S+ +VSA D
Sbjct: 4953 SPTLSSTAAVSVRVLDTNDNPPVFVGGPFT-----VKVRENTPVS-----TSVFTVSAED 5002
Query: 147 ADGD---KVAYKL-AVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSPSR 199
AD +AY + A + + + +L G D + + L++E D SPS
Sbjct: 5003 ADSGINADLAYSIVAGAEGGQLFINSSSGILRVGGAGLDRESNPHFVLSLEVRDRGSPSL 5062
Query: 200 YAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKR-------IDF 252
A V ++ V + + I AP + + V T + +
Sbjct: 5063 TAATTVNVTVE---DVNDEAPVFTEIQYVFHAPENVSSNSIVGLVSATDNDAGTNAFVKY 5119
Query: 253 SETDGEMEGRIV---FALEKETER 273
S T+G G F E ET R
Sbjct: 5120 SITEGNANGTFSVNPFLGEIETNR 5143
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 14/147 (9%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET---HVTVDVLDENDNSPVFSQKV 114
SG++ V +G +DR+ ++ + A + + + + VTV +LD NDNSPVF+Q
Sbjct: 3567 SSGIIRV-NGSLDRDTESRIVFAVNAQESRSPFRTASVPALVTVTLLDVNDNSPVFNQSA 3625
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQTGEL 172
Y S+++ N + + + + A K+ +++ +++ I +G +
Sbjct: 3626 Y-------ISAVSENALPGRIVTIVAASDADSGSNAKLTFRIIDGDRNDVFSIGSTSGIV 3678
Query: 173 LLTGDPPSDDVE-YELTVEAHDLQSPS 198
+ GD + +E Y LTVEA D SPS
Sbjct: 3679 SVKGDLDREIIEGYSLTVEARDQGSPS 3705
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 67/148 (45%), Gaps = 19/148 (12%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE YSL +T TD G+ A +++TV V D NDNSP F+ Y L +
Sbjct: 5948 LDREVKDSYSLPVTVTD--GLFSAVSNLTVVVDDVNDNSPQFNASSY---FASLSEGGGA 6002
Query: 129 NVSHWKKFSSIGSVSATDAD---GDKVAYKLA---VPSNLVVIVPQTGELLLTGDPPSDD 182
N + +V A+D+D V Y++ S + GE++ GD +D
Sbjct: 6003 N-------RPVITVLASDSDVGENGSVTYQIVGGNSGSTFALRSRGKGEIVAVGDLDYED 6055
Query: 183 -VEYELTVEAHDLQSPSRYAREPAQVWL 209
+ L VEA D SP R + P V +
Sbjct: 6056 RTNFTLFVEARDGGSPVRSSTVPVYVSI 6083
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 22/152 (14%)
Query: 31 SITQGNDNHTFALKNPTTHE-IRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG- 88
+I +GN + ++L + ++ + N+T +GV+ V SGDIDRE + ++ V+TA+ + G
Sbjct: 9514 AIDKGNSSLKYSLTSGSSVPFVVNAT---TGVISV-SGDIDRELNSSFTFVVTASTIAGN 9569
Query: 89 INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ VTV + D NDN+P F+ N+ V S I + ATD D
Sbjct: 9570 VPPGSATVTVTIADINDNTPQVDPLTTAFV------PFNATVG-----SHIVVIQATDPD 9618
Query: 149 G---DKVAYKLAV--PSNLVVIVPQTGELLLT 175
K+++ + + I TGE+ LT
Sbjct: 9619 AGVNGKLSFSIVSGNSAQFFAINSSTGEITLT 9650
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 83/196 (42%), Gaps = 38/196 (19%)
Query: 15 ILVASSHKHPHQL--VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
I +SS + P + + Y I G+D TF T SGV+ + S ++DRE
Sbjct: 4474 IQASSSDEDPGKTNGIVYGIVSGDDESTF-------------TVDGSGVVTLAS-ELDRE 4519
Query: 73 EVAQYSLVITAT-DVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
VA Y+LV++AT V G N + V V D ND P F L S NV
Sbjct: 4520 AVANYTLVVSATRAVPGRNLTGYATLFVTVGDVNDREPSF-----------LSSFKEVNV 4568
Query: 131 SHWKKFS-SIGSVSATDAD----GDKVAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV 183
S I VSA D D G AY L N V + QTG + ++ ++
Sbjct: 4569 SEGVPIGFEITQVSAEDTDAGLNGVVTAYNLT-KGNFDGVFSISQTGRISVSNSLNREET 4627
Query: 184 E-YELTVEAHDLQSPS 198
Y LTV A D SP+
Sbjct: 4628 GFYRLTVAAIDGGSPA 4643
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 67/155 (43%), Gaps = 23/155 (14%)
Query: 57 SKSGVLLVTS-GDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQK 113
S +GV+ V DID E Y+ + A D GI E V V V D NDN+PVF++
Sbjct: 9024 SSTGVISVARPSDIDMETNPLYNFTVVAID-AGIPQKSGEVIVRVTVTDVNDNAPVFTKL 9082
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNL---VVIVP 167
Y +V + +S+ VSA+DAD V Y + +PS VI
Sbjct: 9083 FYSAVV------------NGTSDTSLVRVSASDADSGLNGAVTYSI-LPSQFSDRFVINK 9129
Query: 168 QTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAR 202
TG++ + + L V A D PS A+
Sbjct: 9130 TTGDIFFSDLALNQSFNASLEVVAEDSGFPSLNAK 9164
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 61/138 (44%), Gaps = 19/138 (13%)
Query: 104 NDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLV 163
NDN P+FS Y V + N S K S+ V+A+D DGDK+ Y ++PS +
Sbjct: 3515 NDNPPLFSPTNYAVQVQE-------NASLGK---SLLKVTASDLDGDKLLY--SIPSVVP 3562
Query: 164 VIVPQTGELLLTGDPPSD-DVEYELTVEAHDLQSPSRYAREPAQVWLQF-----NSPVLQ 217
V +G + + G D + V A + +SP R A PA V + NSPV
Sbjct: 3563 FSVNSSGIIRVNGSLDRDTESRIVFAVNAQESRSPFRTASVPALVTVTLLDVNDNSPVFN 3622
Query: 218 DEQLLQMIDRKSEAPHRI 235
+ + + P RI
Sbjct: 3623 QSAYISAVSENA-LPGRI 3639
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVY 115
L G IDRE +LV++A D GI + + T V V++ D NDN+P F+++ Y
Sbjct: 3985 LTVGGSIDREAFDTITLVVSAVD-AGIPRLHSTTTVVVNITDVNDNAPEFTRRTY 4038
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 26/123 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ ++IT GN+ F+L +S SG L + +DRE Y L + +D
Sbjct: 8288 LNFAITSGNNGGIFSL------------DSLSGQLSIVR-SLDRETKKNYDLTVAVSDSG 8334
Query: 88 GINKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKF-SSIGSVSAT 145
+ + T V ++V D +DN PVF+Q +Y N++ S +SI +VSAT
Sbjct: 8335 VPSLSSTTVLKINVTDIDDNIPVFNQTIY-----------NASASEDAGLGNSIVTVSAT 8383
Query: 146 DAD 148
D D
Sbjct: 8384 DGD 8386
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 41/87 (47%), Gaps = 15/87 (17%)
Query: 26 QLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
QL+ YSI GN N F L + T L + +DRE ++ Y L I A+D
Sbjct: 1556 QLI-YSIVGGNINGAFNLDSATAS-------------LTVAKSLDRETLSSYRLTIQASD 1601
Query: 86 VKGINKAET-HVTVDVLDENDNSPVFS 111
++ T + V V D NDN PVF+
Sbjct: 1602 GGTSPRSSTARIFVGVSDVNDNPPVFT 1628
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 16/146 (10%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYR 116
+G LL T+ ++D E Y LV+ D + T VTV+VLDENDN+PVF+
Sbjct: 1155 SAGGLLKTARNLDYERRQTYHLVVQVEDFGFPQHSGTAAVTVEVLDENDNAPVFNTTT-- 1212
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGEL 172
+ D+ ++ + + + ++ ATD D GD ++ S + +TG +
Sbjct: 1213 -VFADVPENVATG-------TVVETLKATDRDSGSNGDISYSIVSGNSEGKFVADKTGNV 1264
Query: 173 LLTGDPPSDDV-EYELTVEAHDLQSP 197
++ + + EY L VEA D +P
Sbjct: 1265 IVVASLDFEKIREYRLGVEARDGGNP 1290
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
Query: 24 PHQLVRYSITQGND--NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVI 81
P ++ + QG D N TF LK+ +T + + + L + +DREE A Y+L +
Sbjct: 9299 PTLILDVKLLQGRDVENVTFLLKSNSTDRFFITKDGR----LFANTSLDREETASYNLTV 9354
Query: 82 TATDVKGI----NKAETHVTVDVLDENDNSPVFSQ 112
+ + + VTV V D NDN PV Q
Sbjct: 9355 ISNVLSSFPFLRKSIQVSVTVSVSDANDNIPVIEQ 9389
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 20/90 (22%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV- 86
VRYSI GN N F++ + ++ S +DRE Y L + A
Sbjct: 9729 VRYSIISGNSNSKFSISSNGEISVQKS--------------LDREIQNLYLLTVRAVAFD 9774
Query: 87 -----KGINKAETHVTVDVLDENDNSPVFS 111
G + E + T++VLD+NDN PV +
Sbjct: 9775 PAFAPNGSSPVEVNATINVLDDNDNRPVIT 9804
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 16/108 (14%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G G + + + L+RYS+T + T H + + K+
Sbjct: 8480 GKAGFSVQATDADSGINSLIRYSLTDASSTFTI------DHRFGDLSTLKT--------- 8524
Query: 69 IDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
+DRE A Y+L + A D T V +LD NDN+P F+Q V+
Sbjct: 8525 LDRETQASYNLTVLAVDSGSPRLTGTATVAAILLDVNDNAPTFTQSVF 8572
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 27/134 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V +SI G+++ F L + T+ LLV +G +DRE ++ + ++
Sbjct: 8602 VTFSILSGDEDGAFRLSDVTSG------------LLVVNGSLDRESRKRHVFEVQVANIH 8649
Query: 88 -GINKA----ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
G+ ++ V + + + ND SPVFS +Y S + + S+ +V
Sbjct: 8650 PGVQQSVLFDTAFVNLTISNVNDESPVFSSLLYS----------ASILENRPPGQSLVTV 8699
Query: 143 SATDADGDKVAYKL 156
SA+D D D V+Y+
Sbjct: 8700 SASDKDDDNVSYRF 8713
>gi|242021157|ref|XP_002431012.1| Cadherin-23 precursor, putative [Pediculus humanus corporis]
gi|212516241|gb|EEB18274.1| Cadherin-23 precursor, putative [Pediculus humanus corporis]
Length = 996
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 72/131 (54%), Gaps = 13/131 (9%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS T V LPI+ A +RY+I GN++ F LK P + S G
Sbjct: 131 LENSPPSTVVSRLPIIQAYRGGVGGINIRYAIVGGNEDDAFRLK-PKVY-----NNSCFG 184
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
V LV + +DRE+ ++ + I A D K I+KA T + V++LDENDNSPVF Q VY F
Sbjct: 185 VELVANIPLDREKTSERLVTIQAADEKYIDKAYTKIKVNILDENDNSPVFKQLVYDF--- 241
Query: 121 DLKSSLNSNVS 131
+LN N++
Sbjct: 242 ----ALNKNIN 248
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 40/193 (20%)
Query: 28 VRYSI-TQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQ---YSLVITA 83
+RY++ QG TF + PT+ ++ + E +D E++ Q YSL++TA
Sbjct: 265 IRYTLKAQGQGAGTFNI-GPTSGIVKLAKE------------LDFEDLRQPHVYSLIVTA 311
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
T+ G +T+ V D NDN+P F Y+ D +L +SI V
Sbjct: 312 TEDSGGFSTSVELTIRVTDVNDNAPKFELPDYQAHNVDEDIALG---------TSILKVK 362
Query: 144 ATDADGD---KVAY-----KLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQ 195
ATD+D ++ Y +V +N I+ +L D +++ YE V A D
Sbjct: 363 ATDSDSGFNAEIEYLVSDDHFSVDAN--GIISNNKQL----DADNNNAYYEFVVTAKDKG 416
Query: 196 SPSRYAREPAQVW 208
PS+ +++
Sbjct: 417 EPSKTGTATVRIY 429
>gi|348524466|ref|XP_003449744.1| PREDICTED: protocadherin Fat 1 [Oreochromis niloticus]
Length = 4614
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 129/265 (48%), Gaps = 46/265 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I GN N+ F + NP SGV+ VT +D E +A+Y L+I T++
Sbjct: 1698 VFYQIKGGNINNAFDI-NP-----------NSGVV-VTQKALDYETIAEYKLIIQGTNMA 1744
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G+ + T +T+ + DENDN+PVF Q+ ++ ++ + S+L ++V ++ + + ATDA
Sbjct: 1745 GL-ASNTTLTIHLKDENDNAPVFDQREFQGVISE--SALINSVVLTRENTPF-VIHATDA 1800
Query: 148 DGDKVA---YKLAVP--SNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHDLQSPSR 199
D D+ A Y++ P N I TG + +T P D + + TV+ HDL P
Sbjct: 1801 DCDQNAMLIYQIVEPFAHNYFAIDSSTGAIRITS--PLDYEQRSVFRFTVQVHDLGMPRL 1858
Query: 200 YAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKR----IDFSET 255
+A A V +++ID AP +++ + PT + I S T
Sbjct: 1859 FAETTANV-------------TIEVIDVNDCAPVLSQEQYEATVIVPTYKGVEVIQVSAT 1905
Query: 256 DGEM--EGRIVFALEKETEREKFKI 278
D + +++F++ + +KFK+
Sbjct: 1906 DADSGPNSKLLFSISEGNIGDKFKM 1930
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y IT GN FA+ +K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1175 YKITSGNPQGFFAIN------------TKTGLVTTTSRKLDREQQDEHILEVTITDHGVP 1222
Query: 90 NKAET-HVTVDVLDENDNSPVFSQKVYRF 117
K+ T V V VLDENDN P+F +K+Y+
Sbjct: 1223 PKSTTVRVIVQVLDENDNRPLFLEKIYKI 1251
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 57/108 (52%), Gaps = 16/108 (14%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DREE Y L ITA+D GI A+ V V VLD NDNSPV + VY V + +S
Sbjct: 2987 LDREEKDNYLLNITASD--GIFTAKAVVEVKVLDANDNSPVCDKSVYSESVPE-----DS 3039
Query: 129 NVSHWKKFSSIGSVSATDAD---GDKVAYKL-AVPSNLVVIVPQTGEL 172
I VSATDAD +++Y+L V S L +I TGEL
Sbjct: 3040 PAGRL-----ILQVSATDADIRSNAQISYELQGVGSELFIIDFVTGEL 3082
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
VRYSI GN F + +P E++ + + +DRE + Y+L + A+D
Sbjct: 3372 VRYSIVAGNQGSPFTI-DPVRGELKVARQ------------LDRERTSGYTLTVVASDNG 3418
Query: 88 GIN-KAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+ + +D+ D NDN P+FSQ Y I+
Sbjct: 3419 APPLSSSAMINIDISDINDNPPLFSQANYSLII 3451
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 102/227 (44%), Gaps = 45/227 (19%)
Query: 16 LVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVA 75
+V + K+P ++Y+ +D + F + NP T L+ T+G I+ + +
Sbjct: 387 MVTAVPKYPQ--LKYAFRHKSDKNRFTI-NPDTG------------LISTAGPINADISS 431
Query: 76 QYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK 135
Q+ L + +D KA V VDV+D N+N+P F Q Y K+S++ NV
Sbjct: 432 QFQLDVITSD----KKAAAKVIVDVIDVNNNAPEFQQTSY-------KASVDENVPIG-- 478
Query: 136 FSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGEL-LLTGDPPSDDVE--------YE 186
+S+ +V ATD D + Y V ++ + PQ + +G + +V Y
Sbjct: 479 -TSVVTVKATDLDKGENGY---VTYSITNVSPQPFVIDYFSGVISTSEVLDYELMPRIYN 534
Query: 187 LTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQ-LLQMIDRKSEAP 232
L V A D SP R E A V + N+ L D + L + +D + P
Sbjct: 535 LKVRASDWGSPYRREVE-ASVIITLNN--LNDNKPLFENVDCEVTVP 578
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 109/272 (40%), Gaps = 50/272 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
L TS +DREE +YS + A D G E+ + + V D NDN P FS Y V
Sbjct: 3082 LKTSQPLDREEKDEYSFKVRAVDGGG-RYCESDIHIIVEDVNDNPPQFSSDPYTITV--- 3137
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPP 179
+ + + + +SA D D + Y L ++ V ++ ++ P
Sbjct: 3138 -------FENTETGTFVAKLSANDLDTGLNSDILYSLVESADGFFSVDESTGVITLERPL 3190
Query: 180 SDDVE--YELTVEAHDLQSPSRYAREPAQVWLQF-----NSPVLQDEQLLQMIDRKSEAP 232
+V+ YEL A D SP + QV + N PV + + +
Sbjct: 3191 DREVQSVYELKARASDQGSPRLSSL--CQVVISVLDINDNPPVFEHREYTATVSEDVAVG 3248
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGD 292
++ RV A R D + G I +++ E F + +P + GD
Sbjct: 3249 TQV--LRVHAASR----------DADANGEITYSIISGNEHGMFSV---DP-----KTGD 3288
Query: 293 VRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
V V + D+ E + ++++TI +AT+GG
Sbjct: 3289 VFVIEPLDY-----EASHEYYITI--EATDGG 3313
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 114/272 (41%), Gaps = 47/272 (17%)
Query: 62 LLVTSGDIDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
++ T+ +D EE+ Q+ L + D V ++ ++ VT+DV D NDN+PVF++ YR +
Sbjct: 2342 IISTAQVLDHEEIQQHKLRVRVVDGGVPALS-SDIIVTIDVTDLNDNAPVFTEHTYRTTI 2400
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATD---ADGDKVAYKLAVPSNL---VVIVPQTGELL 173
+L H+ + V A+D +D +K+ + + + N I +TG++
Sbjct: 2401 SELAPR-----GHF-----VSQVQASDPDSSDTNKLQFSI-ISGNEDQNFAINKRTGDIT 2449
Query: 174 LTGD-PPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
++ P Y L V D S + F+SP L +
Sbjct: 2450 ISNHRRPHMQPLYNLNVSVSDGVFRSSALVTVKVIGANFHSPTFSQVDYLAEL------- 2502
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGD 292
+E V V K D D + G+I + + + ++KF I +ENG+
Sbjct: 2503 --VENSPVGTLVAEAKATD---DDEGIYGQITYQIINDFAKDKFSI---------NENGE 2548
Query: 293 VRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
+ + E L E T + + I+ A +GG
Sbjct: 2549 I-----FTLESLDRENTEEKVIPISLMAKDGG 2575
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 23/173 (13%)
Query: 28 VRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+RY I G++ + F ++ + +R T+ S +L +RE Y L I A+
Sbjct: 69 IRYKIISGDNENLFKAEDYLLGDFSFLRIRTKGGSTAIL------NREVKDHYVLTIKAS 122
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+ + T V V VLD ND P+FS Y + + N+ + +S+ V+A
Sbjct: 123 ERNTNLECRTQVKVQVLDTNDLRPLFSPTSYSIALPE-----NTAIR-----TSVAKVTA 172
Query: 145 TDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
TDAD + Y +++ + P +G + LTG + + YEL + A D
Sbjct: 173 TDADIGTNGEYYYSFREWTDMFAVHPTSGVVTLTGKLDYSETKLYELEILAVD 225
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 14/116 (12%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G + L + AS + + YSI GN++ F S + K+G + V
Sbjct: 3246 AVGTQVLRVHAASRDADANGEITYSIISGNEHGMF------------SVDPKTGDVFVIE 3293
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
+D E +Y + I ATD ++ V +++ D NDN PVFSQ VY ++ +
Sbjct: 3294 -PLDYEASHEYYITIEATDGGSPPLSDMATVNINLTDVNDNRPVFSQDVYTAVISE 3348
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVT-VDVLDENDNSPVFSQKVY 115
++G LLV S +DRE Y+L IT D+ K+ + + V +LD NDNSP F Q+ Y
Sbjct: 769 ETGWLLVYS-PLDRETADHYTLNITVYDLGIPQKSSSRLLDVKILDANDNSPQFLQESY 826
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
SG L+V +D E+ + Y+L + ATD G T V + V+D N++ P FS+ VY
Sbjct: 1409 SGTLIVAR-PLDAEQKSNYNLTVEATD--GTRTVSTQVLIRVIDTNNHRPEFSENVY 1462
>gi|156544389|ref|XP_001607435.1| PREDICTED: cadherin-23-like [Nasonia vitripennis]
Length = 1842
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 122/278 (43%), Gaps = 34/278 (12%)
Query: 40 TFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVD 99
T+ L+ + R T+SKSG + V +D E YSL + A D G + +V V+
Sbjct: 529 TYVLRGFGADKFR--TDSKSGGVYVAR-PLDYETQKSYSLTMEARDGGG-KISTVNVLVE 584
Query: 100 VLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG-----DKVAY 154
+ D NDN+PVF QK Y IV + +S + + V ATDADG ++ Y
Sbjct: 585 LEDVNDNAPVFEQKEYSRIVRERATSFDPQM----------FVRATDADGPEQGDGRITY 634
Query: 155 KL----AVPSNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHDLQSPSRYAREPAQV 207
+ ++ N+ I P TGEL +T S D E YELT+ A D SP+++A A++
Sbjct: 635 SISEHNSMNDNVFKIHPDTGELTITRPARSGDTERGIYELTIRATDYGSPAKFAE--AKI 692
Query: 208 WLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFAL 267
+++ P Q PH R + A T+ I + D + ++
Sbjct: 693 YVRVGVPGNQKPIFRGNFKSNQPGPHAYRARILENAAPGTEVIRVTANDPDGRDNLLQYQ 752
Query: 268 EKETEREKFKIRDENPWITVDENGDVRVKKRWDFEELG 305
+ ++ F I + ITV + R D E G
Sbjct: 753 IRSGAKDNFVINSGSGVITVSPDA------RLDLETGG 784
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 38/194 (19%)
Query: 22 KHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVI 81
K + +VRYSIT G + + F ++ P IR + + +DRE + +
Sbjct: 1098 KRGYGVVRYSIT-GENANLFEIE-PINGNIR----------IAPNTTLDRERQSVLRMYA 1145
Query: 82 TATDVK--GINK--AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFS 137
A+D+ G + A VTVDVLD NDN+P+F Q Y ++ + +
Sbjct: 1146 IASDMPEGGAEQRTARALVTVDVLDVNDNAPMFPQDSYTAVIPE----------NAPTGI 1195
Query: 138 SIGSVSATDAD---GDKVAYKL---AVPSNLVVIVPQTGELL----LTGDPPSDDVEYEL 187
S+ +++A+D D G + + + S L I TGE++ LTG ++ Y +
Sbjct: 1196 SVVNITASDPDEGPGGVIIFDIIDEGEASGLFKINQTTGEIMSNRELTGKGRTE--PYYM 1253
Query: 188 TVEAHDLQSPSRYA 201
+ A D P Y+
Sbjct: 1254 RIRAQDSGDPVLYS 1267
>gi|307194561|gb|EFN76853.1| Cadherin-related tumor suppressor [Harpegnathos saltator]
Length = 3259
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 111/254 (43%), Gaps = 49/254 (19%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
S ++ SG + V +G +DREE +Y L I A D G +AET +T+ + D+NDN P F +
Sbjct: 1089 SIDALSGNVTV-AGHLDREEQDEYLLKIVAVD--GAWRAETALTITIQDQNDNFPEFDET 1145
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQT 169
YRF +L+ ++ + +G V+A D D ++Y L PS+L + P T
Sbjct: 1146 TYRFHFPELQPAM----------AHVGQVTAIDRDKQGPNSAISYSLLQPSDLFTVDPAT 1195
Query: 170 GELLL--------TGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQL 221
G++ T P S + Y LT+ A D P +R V
Sbjct: 1196 GDVFSKRTLRYKHTHRPSSPENLYSLTIVATDNGKPPMSSRSLVYV-------------- 1241
Query: 222 LQMIDRKSEAPHRIEKRRVTRAV--------RPTKRIDFSETDGEMEGRIVFALEKETER 273
++D + AP R E+R V R T+ I + D + I ++L
Sbjct: 1242 -SVVDANNNAP-RFEQRSYLSPVPENYGVNKRITQLIARDDADFGVNAEIDYSLVSVNGS 1299
Query: 274 EKFKIRDENPWITV 287
+ F I + N W+ V
Sbjct: 1300 DLFSIEERNGWLYV 1313
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 54/100 (54%), Gaps = 14/100 (14%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVG 120
LL SG +DRE+ + Y+L + A D ++ + VTV VLDENDNSPVF K Y V
Sbjct: 362 LLRVSGPLDREQTSNYTLQVIAKDRGDPPRSSSIPVTVTVLDENDNSPVFDPKQYSATVA 421
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA 157
+ N+++ +S+ VSA D D +V Y +A
Sbjct: 422 E-----NASIG-----ASVLQVSAMDRDEGANGRVRYSIA 451
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 16/94 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ +VRY I+ GN+ + F + H I +G + + +D + V +Y L ITA
Sbjct: 1391 PNGMVRYKISAGNERNEFFV-----HSI-------TGAVTILE-PLDYDMVQEYRLNITA 1437
Query: 84 TDVKGI--NKAETHVTVDVLDENDNSPVFSQKVY 115
TD+ G +A +TV+V D NDN P F+Q VY
Sbjct: 1438 TDL-GFEPRQAVATLTVNVSDINDNPPTFNQSVY 1470
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 85/182 (46%), Gaps = 35/182 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVI----TA 83
VRYSI +G+DN F + S+ G ++ + +++ E +Y L I A
Sbjct: 446 VRYSIAKGDDNRDFTI-------------SEDGGVIRVAKNLNFERKPRYYLTIHGDDCA 492
Query: 84 TDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
+V ++++T VT+ VLD NDN+PVF Y + + N+ F + V
Sbjct: 493 AEVGEKSRSDTAQVTITVLDINDNAPVFLDSPY-------IAHVMENMVPPGGF--VIQV 543
Query: 143 SATDAD----GDKVAYKLA-VPSNLVVIVPQTGELLLTGDPPSDDV--EYELTVEAHDLQ 195
A DAD D+V Y L ++L I TG++ L P +V EY LT+ A D
Sbjct: 544 KAYDADTPPYNDQVRYFLKEGDTDLFRINASTGDIFLL-RPLDREVMSEYTLTLVAMDTG 602
Query: 196 SP 197
SP
Sbjct: 603 SP 604
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE +Y L + A D G+ + +T+ V D NDN+P F Y F V +
Sbjct: 57 LDRETKEKYLLRVRADD--GLQHRDIVLTIQVTDTNDNAPTFQSTAYSFDVPE------- 107
Query: 129 NVSHWKKFSSIGSVSATDADGD----KVAYKLAV--PSNLVVIVPQTGELLLTGDPPSDD 182
+ S +G + ATDAD + +++Y L +++ + P TG LT +
Sbjct: 108 ---DVLRGSRVGQIVATDADAEGPNSQLSYVLISDWANDVFSLNPNTGVFTLTASLDYEQ 164
Query: 183 VE-YELTVEAHDLQSP 197
++ Y L V+A D P
Sbjct: 165 MQHYILVVQATDGGMP 180
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 123/313 (39%), Gaps = 56/313 (17%)
Query: 1 MENSKSGTGVKGLPILVASSH---KHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTES 57
MEN+ GT P+L ++ + V Y++ G+D+ F + + T
Sbjct: 212 MENATIGT-----PVLTVTAQDLDSGDNGRVVYAVVGGDDDGDFVVASNGT--------- 257
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD-----VKGINKAETHVTVDVLDENDNSPVFSQ 112
L+T ++RE Y+LV++ATD + ++ + VTV +LD ND SP F
Sbjct: 258 -----LLTHRLLNRERKPLYNLVLSATDSPLPPARPLS-STVQVTVVLLDVNDMSPEF-- 309
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGEL 172
+ K S+ N SI +V + V Y L S + G L
Sbjct: 310 ------ISPTKISIIENAPSNTVVMSIKAVDRDEGRNGYVEYSLENDSLPFTLGSVDGLL 363
Query: 173 LLTGDPPSDDVE---YELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQMID 226
++G P D + Y L V A D P R + P V + NSPV +Q +
Sbjct: 364 RVSG--PLDREQTSNYTLQVIAKDRGDPPRSSSIPVTVTVLDENDNSPVFDPKQYSATV- 420
Query: 227 RKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWIT 286
E + +V +D E GR+ +++ K + F I ++ I
Sbjct: 421 --------AENASIGASVLQVSAMDRDEG---ANGRVRYSIAKGDDNRDFTISEDGGVIR 469
Query: 287 VDENGDVRVKKRW 299
V +N + K R+
Sbjct: 470 VAKNLNFERKPRY 482
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 30/153 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
YSI GN F + +P T +I T+ +DRE ++ Y L+I A D+
Sbjct: 1715 YSIIGGNIGQAFKV-DPQTGDIE------------TAKQLDRESMSMYDLIIGAIDIGLP 1761
Query: 90 NKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ T V +++ D NDN PVF D + + +SI ++SATD D
Sbjct: 1762 PETGTATVHIELTDVNDNGPVF----------DPPEVIGYVSENEPPGTSIMTLSATDPD 1811
Query: 149 ----GDKVAYKL--AVPSNLVVIVPQTGELLLT 175
G +Y+L SN+V + +G L T
Sbjct: 1812 LPPNGAPFSYRLIGGRQSNMVTLDKHSGVLRTT 1844
>gi|47216301|emb|CAF96597.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2244
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 97/192 (50%), Gaps = 29/192 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I GN N+ F + NP SGV+ VT +D E AQY+LVI T++
Sbjct: 451 VFYQIKAGNINNAFDI-NP-----------NSGVV-VTQRPLDYETTAQYTLVIQGTNMA 497
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G+ T + V + DENDN+P+F QK +R +V + + +NS V + + V A+DA
Sbjct: 498 GLG-TNTTLLVHLKDENDNAPIFIQKEFRGVVSE-SAPVNSVVLTRENTPLV--VRASDA 553
Query: 148 DGDKVA---YKLAVP--SNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSPS 198
DGD+ A Y++ P N I TG + +T + D E + TV+ HDL P
Sbjct: 554 DGDQNAMLIYQIVEPFAHNYFAIDSNTGAIRIT---TALDYEERNTFHFTVQVHDLGIPR 610
Query: 199 RYAREPAQVWLQ 210
+A A V ++
Sbjct: 611 LFAETAANVTIE 622
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 112/268 (41%), Gaps = 53/268 (19%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D EE+ Q+ L + A D +G+ +E VT+DV D NDN+P F+Q+ Y + +L
Sbjct: 1102 LDYEEIRQHELRVRAVD-RGVPALSSEVIVTIDVTDLNDNAPEFTQQTYNSTISELAPR- 1159
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLV--VIVPQTGELLLTGD---- 177
H+ I V A+DAD D + + + + I TG +L++
Sbjct: 1160 ----GHF-----ITQVQASDADSSDKDNLLFFFTSGNEDLNFSIDKHTGAILISNHRRVH 1210
Query: 178 -PPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIE 236
P Y L+V D S A + F+SP + + + SE +
Sbjct: 1211 MQPF----YNLSVSVSDGVFRSSAAVLVTVIGANFHSPTFSQTEFVVELVEHSEIYTPVA 1266
Query: 237 KRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
+ + T A D + G+I + + + ++KF +V+ENG++
Sbjct: 1267 EAKATDA------------DEGIYGQIRYQIVNDFAKDKF---------SVNENGEI--- 1302
Query: 297 KRWDFEELGPEKTIDFWVTINNQATNGG 324
+ E L E ++ V I+ A +GG
Sbjct: 1303 --FTLESLDRENNMEKVVPISLVARDGG 1328
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 53/108 (49%), Gaps = 16/108 (14%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DREE Y L ITA+D GI A+ V V VLD NDNSP + +Y V + NS
Sbjct: 1740 LDREEKDNYLLNITASD--GIFTAKATVEVKVLDANDNSPQCEKALYSESVPE-----NS 1792
Query: 129 NVSHWKKFSSIGSVSATDAD---GDKVAYKL-AVPSNLVVIVPQTGEL 172
I VSA+DAD ++ Y+L S L I TGEL
Sbjct: 1793 PAGRL-----ILQVSASDADIRSNAQIFYELQGAGSELFTIDSDTGEL 1835
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 14/114 (12%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + Y I GN++ F S + ++G + V
Sbjct: 2001 GTQLLRVQAASRDTEANGEISYGIISGNEHGLF------------SVDPRTGDIFVIQ-P 2047
Query: 69 IDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
+D E +Y + + ATD ++ V +++ D NDN PVFSQ VY +V +
Sbjct: 2048 LDYEASHEYYITVEATDGGSPPLSDMATVNINLTDVNDNRPVFSQDVYTAVVSE 2101
>gi|410917722|ref|XP_003972335.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Takifugu
rubripes]
Length = 4583
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 125/275 (45%), Gaps = 48/275 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I GN N F + NP SGV+ VT +D E QY+L+I T++
Sbjct: 1670 VFYQIKGGNINGAFDI-NP-----------NSGVV-VTQRPLDYEATPQYTLIIQGTNMA 1716
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G+ T + V + DENDN+P+F+QK + I+ + + +NS V + + + A+DA
Sbjct: 1717 GLG-TNTTLLVHLKDENDNAPIFTQKEFTGIISE-SAPVNSVVLTRENTPLV--IRASDA 1772
Query: 148 DGDK---VAYKLAVP--SNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSPS 198
DGD+ + Y++ P N I TG + +T + D E + TV+ HDL P
Sbjct: 1773 DGDQNAMLVYQIVEPFAHNYFAIDSNTGAIRIT---TALDYEQRNAFHFTVQVHDLGMPR 1829
Query: 199 RYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKR------IDF 252
+A A V +++ID P +K + PT + I+
Sbjct: 1830 LFAEAAANV-------------TVEVIDVNDCPPVFSQKMYEATVIVPTYKGVEVIQINA 1876
Query: 253 SETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
+++D +++ ++ + EKF++ I+V
Sbjct: 1877 TDSDSRPNSKLLLSISEGNIGEKFRMDPATGMISV 1911
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 13/91 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN FA+ ++G++ TS +DRE+ ++ L IT TD
Sbjct: 1145 LSYRITSGNPQGFFAING------------RTGLITTTSRKLDREQQDEHILEITVTDHG 1192
Query: 88 GINKAET-HVTVDVLDENDNSPVFSQKVYRF 117
K+ T V V VLDENDN P+F +K+Y+
Sbjct: 1193 VPAKSTTVRVIVQVLDENDNRPLFLEKIYKI 1223
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 97/232 (41%), Gaps = 53/232 (22%)
Query: 16 LVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVA 75
+V + K+P Q + G++ + FA+ NP T L+ T+G I+ +
Sbjct: 357 MVTAVPKYPQQKYAFKYKSGHNQNRFAI-NPDTG------------LISTAGPINADSTP 403
Query: 76 QYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK 135
Q L + D K A T V VDV+D N+N+P F Q Y K++++ NV
Sbjct: 404 QIELEVITADAK----AGTKVIVDVIDVNNNAPEFQQTSY-------KTTVDENVPTG-- 450
Query: 136 FSSIGSVSATDADGDKVAYKLAVPSNL---------VVIVPQTGELLLTGDPPSDDVE-- 184
+S+ +V ATD D + Y +N+ V T ELL D E
Sbjct: 451 -TSVLTVKATDHDRGENGYVTYSITNMSPQPFAIDYFTGVITTSELL--------DYELM 501
Query: 185 ---YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQ-LLQMIDRKSEAP 232
Y L V A D SP R E A V + N+ L D + L + +D P
Sbjct: 502 PRIYNLKVRASDWGSPYRREVE-AYVTVTLNN--LNDNKPLFENVDCDVTVP 550
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 112/273 (41%), Gaps = 52/273 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L TS +DREE ++ + A D G +A+ HV+V+ D NDN P FS Y F V +
Sbjct: 3054 LKTSQPLDREEQEEHRFTMRAVDGGGRYCEADVHVSVE--DVNDNPPQFSSDPYTFTVFE 3111
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELLLTGD 177
N+ + + + + A+D D D V L I QTG + L +
Sbjct: 3112 -----NTEIGTY-----VAKLLASDIDVGLNSDIVYSLLDSADGFFSIDEQTGVISL--E 3159
Query: 178 PPSD---DVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHR 234
P D YEL A D SP +F+S L +L + D HR
Sbjct: 3160 RPLDRELQATYELRALASDQGSP------------RFSSVCLVVISVLDINDNPPVFEHR 3207
Query: 235 IEKRRVTRAVRPTK---RIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENG 291
V+ V R+ + D E G I + + E F + +P +G
Sbjct: 3208 EYTATVSEDVTAGTQLLRVQAASRDTEANGEISYGIISGNEHGLFSV---DP-----RSG 3259
Query: 292 DVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
DV V + D+ E + ++++TI +AT+GG
Sbjct: 3260 DVFVIEPLDY-----EASHEYYITI--EATDGG 3285
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 16/97 (16%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
H VRYSI GN F + ++ G L V +DRE + Y+L + A+
Sbjct: 3341 HSQVRYSIVAGNQGSPFTI------------DAARGELKVAR-QLDRERTSGYTLTVVAS 3387
Query: 85 DVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIV 119
D G + + +D+ D NDN P+FSQ Y I+
Sbjct: 3388 D-SGTPPLSSSAMINIDISDVNDNPPLFSQANYSLII 3423
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 53/108 (49%), Gaps = 16/108 (14%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DREE Y L ITA+D GI A+ V V VLD NDNSP + +Y V + NS
Sbjct: 2959 LDREEKDNYLLNITASD--GIFTAKATVEVKVLDANDNSPRCEKALYSESVPE-----NS 3011
Query: 129 NVSHWKKFSSIGSVSATDAD---GDKVAYKL-AVPSNLVVIVPQTGEL 172
I VSA+DAD + Y+L S L +I TGEL
Sbjct: 3012 PAGRL-----ILQVSASDADIRSNAHITYELQGAGSELFIIDSDTGEL 3054
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 23/173 (13%)
Query: 28 VRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
VRY I G++ + F ++ + +R T+ S +L +RE Y L + A+
Sbjct: 39 VRYKIISGDNENLFKAEDYLVGDFSFLRIRTKGGSTAIL------NREVKDHYVLTVKAS 92
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+ ++ T V V VLD ND P+FS Y SL N + +S+ V+A
Sbjct: 93 ERNTNAESRTRVKVQVLDTNDLRPLFSPTSYSV-------SLPENTAIR---TSVAKVTA 142
Query: 145 TDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPP-SDDVEYELTVEAHD 193
TDAD + Y S++ + P +G + LTG S+ YEL + A D
Sbjct: 143 TDADIGTNGEYYYSFREWSDMFAVHPTSGVVTLTGKLDFSETRLYELEILAVD 195
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 115/272 (42%), Gaps = 47/272 (17%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYRFIV 119
++ T+ +D EE Q+ L + D G+ +E VTVDV D NDN+P F+Q Y +
Sbjct: 2314 VISTAQVLDYEETQQHKLRVRXVD-GGVPALTSEVLVTVDVTDLNDNAPEFTQNTYNSTI 2372
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLV--VIVPQTGELLL 174
+L H+ I V A+DAD DK+ + + + I TG +++
Sbjct: 2373 SELAPR-----GHF-----ITQVQASDADSSDKDKLLFFFTSGNEDLNFSIDKHTGAIIV 2422
Query: 175 TGD-PPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVL-QDEQLLQMIDRKSEAP 232
+ P+ Y L+V D A + F++P Q E ++++
Sbjct: 2423 SNHRRPNLQPFYNLSVSVSDGVFRGSAAVLVTVIGANFHNPTFTQTEYVVEL-------- 2474
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGD 292
+E V V K D E + G+I + + + ++KF +V+ENG+
Sbjct: 2475 --VENSPVGTLVAEAKATDGDEG---VYGQITYQIVNDFAKDKF---------SVNENGE 2520
Query: 293 VRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
+ + E L E I+ V I+ A +GG
Sbjct: 2521 I-----FTLESLDRENNIEKVVPISLIARDGG 2547
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 14/114 (12%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + Y I GN++ F S + +SG + V
Sbjct: 3220 GTQLLRVQAASRDTEANGEISYGIISGNEHGLF------------SVDPRSGDVFVIE-P 3266
Query: 69 IDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
+D E +Y + I ATD ++ V +++ D NDN PVFSQ VY +V +
Sbjct: 3267 LDYEASHEYYITIEATDGGSPPLSDMATVNINLTDVNDNRPVFSQDVYTAVVSE 3320
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 27 LVRYSITQGNDNH--TFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
++R S G+ N + + P H + +S +G + +T+ +D E+ + +
Sbjct: 1766 VIRASDADGDQNAMLVYQIVEPFAHNYF-AIDSNTGAIRITTA-LDYEQRNAFHFTVQVH 1823
Query: 85 DV---KGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
D+ + +A +VTV+V+D ND PVFSQK+Y V
Sbjct: 1824 DLGMPRLFAEAAANVTVEVIDVNDCPPVFSQKMYEATV 1861
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 14/87 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I+ GN F + + +SG L V S +DRE V Y+L IT D+
Sbjct: 725 YVISGGNTGSHFVV------------DMESGWLQVYS-PLDREAVDSYTLNITVYDLGIP 771
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVY 115
K+ + + V +LD NDNSP F Q Y
Sbjct: 772 QKSSSRLLGVKILDANDNSPQFLQDSY 798
>gi|291231670|ref|XP_002735781.1| PREDICTED: hedgling-like [Saccoglossus kowalevskii]
Length = 2902
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 144/327 (44%), Gaps = 59/327 (18%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G L IL + + + Y T GN N TFA+ PT SGVL V +
Sbjct: 2244 GSSILTILATDVDANENGRLTYKFTSGN-NGTFAIV-PT-----------SGVLTV-ALP 2289
Query: 69 IDREEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE A +SL +T +D + AE VT+ + D NDN P FSQ +Y F V
Sbjct: 2290 LDRETTASHSLHVTVSDNGNVQLFAEASVTLTISDANDNVPQFSQNIYTFYV-------- 2341
Query: 128 SNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDV 183
+ + S +G+V ATD D ++ Y +A P + ++ TG + + D +++
Sbjct: 2342 --LENSPFLSLVGNVLATDRDVGSNSRINYTIASGPHDHFILDIVTGSISTSADIDRENI 2399
Query: 184 E-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQLLQMIDRKSEAPHRIEKRR 239
E Y V+A D +PSRY + ++ N PV +++ I H +
Sbjct: 2400 ESYSYNVKATDNGTPSRYNFTSVVIVVEDENDNYPVFNEDEYSVTIAED----HDVNAYV 2455
Query: 240 VTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVD-ENGDVRVKKR 298
+T +D ++ D + ++ F + DE + ++D G++ +K+
Sbjct: 2456 LT--------VDATDADNGTNAELTYSF-----HSSFPVGDE--YFSIDGSTGEITLKQA 2500
Query: 299 WDFEELGPEKTIDFWVTINNQATNGGP 325
D+E + T++F V ++ NG P
Sbjct: 2501 VDYEAV---HTLEFVVICSD---NGSP 2521
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 6 SGTGVKGLPILVASSH--KHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLL 63
+ TGV L I HPH V+Y+I GND+ F+L + T L
Sbjct: 1709 TATGVTLLTISATGEDLASHPHGQVKYTIASGNDDDHFSLDDSTGD-------------L 1755
Query: 64 VTSGDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVL--DENDNSPVFSQKVY 115
V D E ++ ++LV+TATD ++ T V V+++ DENDN+P + Y
Sbjct: 1756 VVIKRFDFETISSHTLVVTATDSTAALGDQLSTDVDVEIIIEDENDNTPTCDSQPY 1811
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 77/182 (42%), Gaps = 36/182 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y I GN + FA+ + SG +L+ S +D E QY L ITA D
Sbjct: 1945 ITYKIVAGNADGKFAV------------DRYSGDILIQS-QLDHEITDQYILEITAIDGG 1991
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+ T +TV + D NDN+P+F+ +Y + + H +S+ +V ATD
Sbjct: 1992 STSLTGTMTLTVKIEDVNDNTPIFTHDIYTTTI----------LEHMGIGTSVLTVKATD 2041
Query: 147 AD-GDKVAYKLAVPSNL----VVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
D G + ++ + I TGE++ T D D E Y V+A D P
Sbjct: 2042 IDSGANAIIEYSITKGMSHEHFSIDRVTGEIMTTADL---DFETRSIYSFKVKASDGGIP 2098
Query: 198 SR 199
R
Sbjct: 2099 MR 2100
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 82/189 (43%), Gaps = 18/189 (9%)
Query: 69 IDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+D E V V+ +D + T V V++ D NDN+P F+ Y ++ + N
Sbjct: 2501 VDYEAVHTLEFVVICSDNGSPVLTTTTTVYVNLTDVNDNAPEFNPAFYS---AEITTECN 2557
Query: 128 SNVSHWKKFSSIGSVSATDA-DGDKVAYKLAVPSNLVVIVPQTGELLLTGD---PPSDDV 183
+ I +VSATDA DG+ + Y L S I TG++ L D
Sbjct: 2558 NG-------EPIVTVSATDAEDGETMKYILTDASEKFKIDINTGDITLIADYTYALQTGQ 2610
Query: 184 EYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA 243
+YEL VEA D +P+ ++ + F++ + E + + KS ++ K +A
Sbjct: 2611 KYELRVEAEDYGTPTSSDEAIVRIDI-FDASLYLVEFYMTL--SKSLLDFKLTKSDFLQA 2667
Query: 244 VRPTKRIDF 252
+ ++F
Sbjct: 2668 ITDILHVNF 2676
>gi|380011903|ref|XP_003690033.1| PREDICTED: LOW QUALITY PROTEIN: protein dachsous-like, partial
[Apis florea]
Length = 2820
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 119/245 (48%), Gaps = 38/245 (15%)
Query: 69 IDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE + +++L + ATD A T V V VLD+NDN P F ++ Y F +L +L
Sbjct: 514 LDRESLDRHALTVLATDNGSPAATASTSVLVTVLDDNDNDPRFEKEFYGF---ELLENLP 570
Query: 128 SNVSHWKKFSSIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE 184
S + +GSVSA+D D K A Y + ++ + P TGE ++T +P + +
Sbjct: 571 SG-------TLVGSVSASDPDLGKNALLRYAVVQANSSFTVDPDTGE-IITREPLDRETK 622
Query: 185 --YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRR 239
+EL +EA D +PSR AR P ++ + NSP + D Q ++ + E P E R
Sbjct: 623 GVHELVLEARDQGTPSRAARVPLKITVLDVNDNSPEIVDPQ-GDVVSVREEQPPGTEVAR 681
Query: 240 VTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDE-NGDVRVKKR 298
V RA+ +TD + + + K+ + + + + TVD G +R K
Sbjct: 682 V-RAL---------DTDLGENASVTYTILKDRDSDGYNV------FTVDPITGMIRTKAV 725
Query: 299 WDFEE 303
D EE
Sbjct: 726 LDHEE 730
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 126/310 (40%), Gaps = 95/310 (30%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
YSI GN FAL +PT SG L ++ ++DRE V++Y L I+A D KG
Sbjct: 1221 YSIVGGNVGAKFAL-DPT-----------SGALSMS--NLDRESVSKYVLTISAKD-KGR 1265
Query: 90 N--KAETHVTVDVLDENDNSPVFSQKVYR------------------FIVGDLKSSLNSN 129
+A ++TV VLD NDN+P F Q Y F G SS N
Sbjct: 1266 PSLEARCNLTVIVLDVNDNAPTFVQNEYSESRARGSAVATAEYPAFGFPYG---SSSNYP 1322
Query: 130 VSHW-KKF-----------SSIGSVSATDAD---GDKVAYKLAVPS-------NLVVIVP 167
SH K+ SS+ +V ATD D K+ Y +A + NL +V
Sbjct: 1323 TSHRPTKYVATVSEDVAPDSSVMTVRATDPDQGVNGKITYAIAEETSWLFRVDNLTGVVT 1382
Query: 168 QTGELLLTGDPPSDDVE----YELTVEAHD-LQSPSRYAREPAQVW---LQFNSPVLQDE 219
G L D E Y V A D + +R + P ++ + N+PV +
Sbjct: 1383 TAGAL---------DRERQSAYNFVVVATDGGKYDARSSTIPVEIRVSDVNDNAPVFE-- 1431
Query: 220 QLLQMIDRKSEAPHRIEKRRVTRAVRPTK---RIDFSETDGEMEGRIVFALEKETEREKF 276
E P R RV+ +P K R+ ++ D G IV++ E E+ KF
Sbjct: 1432 ----------EYPFRA---RVSIGTQPEKNILRVVATDIDEGANGEIVYSFLHEQEKPKF 1478
Query: 277 KIRDENPWIT 286
+I +T
Sbjct: 1479 RIHPSTGAVT 1488
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 17/135 (12%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D E ++YSL + A+D GI++A T + V V D NDN+P F Q Y + + +
Sbjct: 1849 LDAETRSEYSLQVVASD--GIHEATTDLIVRVTDLNDNAPRFQQSAYIATLPEGRGG--- 1903
Query: 129 NVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELLL--TGDPPSDD 182
+ I +V+ATD D +V Y L + + P TG + + T P
Sbjct: 1904 ------ELQEIVTVNATDDDLTEENSRVRYHLLRATKGFSVHPVTGVVTVNRTAIPRPLP 1957
Query: 183 VEYELTVEAHDLQSP 197
E EL V A D P
Sbjct: 1958 KEVELAVVAEDYGKP 1972
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 82/182 (45%), Gaps = 30/182 (16%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P +RY++ Q N N F + +++SG L + S +D E ++ L+I A
Sbjct: 383 PPHPIRYALGQ-NSNDLFGI------------DARSGELYL-SRRLDYETQQRHGLLIRA 428
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G+ A ++V+V D NDN PVF + Y V + K S I V+
Sbjct: 429 VDGGGLT-ANLSLSVEVQDVNDNPPVFERNEYHVEVPE----------GAKLDSQILQVT 477
Query: 144 ATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSR 199
A D D +++Y+L S I P TG + L + ++ + LTV A D SP+
Sbjct: 478 AVDLDTGNNARLSYRLQ-GSTAFRISPNTGWIYLAQALDRESLDRHALTVLATDNGSPAA 536
Query: 200 YA 201
A
Sbjct: 537 TA 538
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 63/153 (41%), Gaps = 31/153 (20%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+ G +DREE ++YS+ I A K ++ V V+DENDNSP F
Sbjct: 1138 LVTLRGPLDREEASRYSVPILARSSKLLDIGTLEVV--VMDENDNSPEFRP--------- 1186
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD------------GDKVAYKLAVPSNLVVIVPQT 169
S V + + I +++A+D D G V K A+ P +
Sbjct: 1187 -GSCYTLAVPENQGTAVIHTIAASDLDEGKNGEFXYSIVGGNVGAKFALD-------PTS 1238
Query: 170 GELLLTGDPPSDDVEYELTVEAHDLQSPSRYAR 202
G L ++ +Y LT+ A D PS AR
Sbjct: 1239 GALSMSNLDRESVSKYVLTISAKDKGRPSLEAR 1271
>gi|350403194|ref|XP_003486727.1| PREDICTED: protein dachsous-like [Bombus impatiens]
Length = 3229
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 116/244 (47%), Gaps = 36/244 (14%)
Query: 69 IDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE + +++L + ATD A V V VLD+NDN P F + Y F DL +L
Sbjct: 919 LDRETLDRHALTVLATDNGSPAATASASVLVTVLDDNDNDPRFEKDFYGF---DLLENLP 975
Query: 128 SNVSHWKKFSSIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE 184
S + +GSVSA+D+D K A Y + ++ + P TGE + T +P + +
Sbjct: 976 SG-------TLVGSVSASDSDLGKNALLRYAVVQANSSFTVDPDTGE-ITTKEPLDRETK 1027
Query: 185 --YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRR 239
+EL +EA D +PSR AR P +V + NSP + D Q ++ + E P E R
Sbjct: 1028 GVHELVLEARDQGTPSRAARVPLKVTVLDVNDNSPEIVDPQ-GDVVSVREEQPPGTEVAR 1086
Query: 240 VTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
V RA+ +TD + + + K+ + + + + +P G +R K
Sbjct: 1087 V-RAL---------DTDLGENASVTYTILKDRDSDGYNVFTIDPI-----TGMIRTKAVL 1131
Query: 300 DFEE 303
D EE
Sbjct: 1132 DHEE 1135
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 124/302 (41%), Gaps = 73/302 (24%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN F L +S +G+L ++ ++DRE V++Y L I+A D K
Sbjct: 1624 IYYSIVGGNIGAKFIL------------DSITGMLSMS--NLDREAVSKYILTISAKD-K 1668
Query: 88 GINKAET--HVTVDVLDENDNSPVFSQKVYR---------------FIVGDLKSSLNSNV 130
G ET ++TV VLD NDN+P F Q Y F + + S +SN
Sbjct: 1669 GRPSLETRCNLTVIVLDVNDNAPSFVQNQYTESRPRGPVPSSEYPGFALSNGFSYGSSNY 1728
Query: 131 S---HWKKF-----------SSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELL 173
+ K+ SS+ SV ATD D K+ Y + ++ + V ++
Sbjct: 1729 PTNYYPSKYVATISEDVAPDSSVMSVRATDPDQGVNGKITYAIGEETSWLFRVDNLTGVI 1788
Query: 174 LTGDPPSDD--VEYELTVEAHDL-QSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDR 227
T P + Y V A D + +R P ++ + N+PV
Sbjct: 1789 TTAGPLDRERQTSYNFVVVATDSGKYDARSTTIPVEIRVSDVNDNAPVFD---------- 1838
Query: 228 KSEAPHRIEKRRVTRAVRPTK---RIDFSETDGEMEGRIVFALEKETEREKFKIRDENPW 284
E P R RV+ +P K R+ ++ D G +V++ E E+ KF+I
Sbjct: 1839 --EYPFRA---RVSIGTQPEKNILRVVATDADDGPNGEVVYSFLHEQEKPKFRIHPSTGA 1893
Query: 285 IT 286
+T
Sbjct: 1894 VT 1895
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 23/125 (18%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL---LVTSGDIDREEVAQYSLVITATD 85
RY I GN F L + H R+ GVL L SG +DRE ++Y LVI A D
Sbjct: 50 RYEIVSGNYADAFRL---SQHRGRD------GVLYLDLQNSGSLDREARSRYHLVIEALD 100
Query: 86 VKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
++ HV V V D NDN P+F+Q Y + + N+ V + + +V+A
Sbjct: 101 GGAPPLRSRLHVNVTVQDVNDNPPIFNQTRYVASIAE-----NATVG-----TPVLAVNA 150
Query: 145 TDADG 149
TD+D
Sbjct: 151 TDSDA 155
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D E ++YSL + A+D G+++A T + V V+D NDN+P F Q Y + + + L
Sbjct: 2252 LDAETRSEYSLQVIASD--GVHEATTDLIVRVMDLNDNAPRFQQSAYIATLPEGRGDLQ- 2308
Query: 129 NVSHWKKFSSIGSVSATD----ADGDKVAYKLAVPSNLVVIVPQTGELLL--TGDPPSDD 182
I +V+ATD D +V Y L + + P TG L + T P
Sbjct: 2309 ---------EILTVNATDDDLTEDNSRVRYYLLKATKGFSVHPATGVLTVNRTAIPRPLP 2359
Query: 183 VEYELTVEAHDLQSP 197
E EL + A D P
Sbjct: 2360 KEVELAIVAEDYGKP 2374
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 80/182 (43%), Gaps = 30/182 (16%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P +RY + Q N N F + + +SG L + +D E ++ L+I A
Sbjct: 788 PSHPIRYVLGQ-NSNDLFGI------------DGRSGELYLAR-RLDYETQQRHGLLIRA 833
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G++ A ++V+V D NDN PVF + Y V + K S I V+
Sbjct: 834 LDGAGLS-ANLSLSVEVQDVNDNPPVFERNEYHVEVPE----------GAKLDSQILQVT 882
Query: 144 ATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSR 199
A D D +++Y+L S I P TG + L + ++ + LTV A D SP+
Sbjct: 883 AVDLDTGNNARLSYRLQ-GSTAFRISPNTGWIYLAQILDRETLDRHALTVLATDNGSPAA 941
Query: 200 YA 201
A
Sbjct: 942 TA 943
>gi|328790020|ref|XP_392300.4| PREDICTED: protein dachsous-like [Apis mellifera]
Length = 3415
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 117/244 (47%), Gaps = 36/244 (14%)
Query: 69 IDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE +++L + ATD A T V V VLD+NDN P F ++ Y F +L +L
Sbjct: 1096 LDRESSDRHALTVLATDNGSPAATASTSVLVTVLDDNDNDPRFEKEFYGF---ELLENLP 1152
Query: 128 SNVSHWKKFSSIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE 184
S + +GSVSA+D D K A Y + ++ + P TGE ++T +P + +
Sbjct: 1153 SG-------TLVGSVSASDPDLGKNALLRYAVVQANSSFTVDPDTGE-IITKEPLDRETK 1204
Query: 185 --YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRR 239
+EL +EA D +PSR AR P ++ + NSP + D Q ++ + E P E R
Sbjct: 1205 GVHELVLEARDQGTPSRAARVPLKITVLDVNDNSPEIVDPQ-GDVVSVREEQPPGTEVAR 1263
Query: 240 VTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
V RA+ +TD + + + K+ + + + + +P G +R K
Sbjct: 1264 V-RAL---------DTDLGENASVTYTILKDRDSDGYNVFTIDPI-----TGMIRTKAVL 1308
Query: 300 DFEE 303
D EE
Sbjct: 1309 DHEE 1312
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 131/304 (43%), Gaps = 76/304 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN FAL +PT SG L ++ ++DRE V++Y+L I+A D K
Sbjct: 1801 IYYSIVGGNIGAKFAL-DPT-----------SGALSMS--NLDRESVSKYALTISAKD-K 1845
Query: 88 GIN--KAETHVTVDVLDENDNSPVFSQKVYR--------------------FIVGDLKSS 125
G +A ++TV VLD NDN+P F Q Y F G S+
Sbjct: 1846 GRPSLEARCNLTVIVLDVNDNAPTFVQNQYAESRPRGGSSVPGTADYPAFGFPYGS-SSN 1904
Query: 126 LNSNVSHWKKF-----------SSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGE 171
++ H K+ SS+ +V ATD D K+ Y +A ++ + V
Sbjct: 1905 YPTSSHHPAKYVATVSEDVAPDSSVMTVRATDPDQGVNGKITYAIAEETSWLFRVDNLTG 1964
Query: 172 LLLTGDPPSDDVE--YELTVEAHDL-QSPSRYAREPAQVW---LQFNSPVLQDEQLLQMI 225
++ T P + + Y+ V A D + +R + P ++ + N+PV +
Sbjct: 1965 VVTTAGPLDRERQSSYKFLVVATDSGKYDARSSTIPVEIRVSDVNDNAPVFE-------- 2016
Query: 226 DRKSEAPHRIEKRRVTRAVRPTK---RIDFSETDGEMEGRIVFALEKETEREKFKIRDEN 282
E P R RV+ +P K R+ ++ D + G IV++ E E+ KF+I
Sbjct: 2017 ----EYPFRA---RVSIGTQPEKNIVRVVATDIDEGLNGEIVYSFLHEQEKPKFRIHPST 2069
Query: 283 PWIT 286
+T
Sbjct: 2070 GAVT 2073
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL---LVTSGDIDREEVAQYSLVITATD 85
RY I GN F L + H R+ GVL L SG +DRE ++Y LVI A D
Sbjct: 146 RYEIVSGNHEDAFRL---SQHRGRD------GVLYLDLQNSGSLDREARSRYHLVIEALD 196
Query: 86 VKGIN-KAETHVTVDVLDENDNSPVFSQKVY 115
++ HV V V D NDN P+F+Q Y
Sbjct: 197 GGAPPLRSRLHVNVTVQDVNDNPPIFNQTRY 227
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 65/146 (44%), Gaps = 17/146 (11%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+ G ++REEV++YS+ I A K ++ A V V+DENDNSP F
Sbjct: 1720 LVTLRGPLNREEVSRYSVPILARSSKLLDIATLEVL--VMDENDNSPEFRP--------- 1768
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDKVA--YKLAVPSNL---VVIVPQTGELLLTG 176
S V + + I +++A D D K Y V N+ + P +G L ++
Sbjct: 1769 -GSCYTLAVPENQGTAVIHTIAAADLDEGKNGEIYYSIVGGNIGAKFALDPTSGALSMSN 1827
Query: 177 DPPSDDVEYELTVEAHDLQSPSRYAR 202
+Y LT+ A D PS AR
Sbjct: 1828 LDRESVSKYALTISAKDKGRPSLEAR 1853
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 17/135 (12%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D E ++YSL + A+D GI++A T + V V D NDN+P F Q Y + + +
Sbjct: 2433 LDAETRSEYSLQVIASD--GIHEATTDLIVRVTDLNDNAPRFQQSAYIATLPEGRGG--- 2487
Query: 129 NVSHWKKFSSIGSVSATD----ADGDKVAYKLAVPSNLVVIVPQTGELLL--TGDPPSDD 182
+ I +V+ATD D +V Y L + + P +G + + T P
Sbjct: 2488 ------ELQEIVTVNATDDDLTEDNSRVRYHLLRATKGFSVHPASGVVTVNRTAIPRPLP 2541
Query: 183 VEYELTVEAHDLQSP 197
E EL + A D P
Sbjct: 2542 KEVELAIVAEDYGKP 2556
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 32/183 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P +RY++ Q N N F + +++SG L + S +D E ++ L+I A
Sbjct: 965 PSHPIRYALGQ-NSNDLFGI------------DARSGELYL-SRRLDYETQQRHGLLIRA 1010
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G++ A ++V+V D NDN PVF + Y V + K S I V+
Sbjct: 1011 LDGGGLS-ANLSLSVEVQDVNDNPPVFERNEYHVEVPE----------GAKLDSQILQVT 1059
Query: 144 ATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSPS 198
A D D +++Y+L S I P TG + L D S D + LTV A D SP+
Sbjct: 1060 AVDLDTGNNARLSYRLQ-GSTAFRISPNTGWIYLAQVLDRESSD-RHALTVLATDNGSPA 1117
Query: 199 RYA 201
A
Sbjct: 1118 ATA 1120
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 109/249 (43%), Gaps = 28/249 (11%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH 95
N T+A+ T+ R ++ +GV+ T+G +DRE + Y ++ ATD + +
Sbjct: 1942 NGKITYAIAEETSWLFR--VDNLTGVV-TTAGPLDRERQSSYKFLVVATDSGKYDARSST 1998
Query: 96 VTVD--VLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GD 150
+ V+ V D NDN+PVF + +R V S+ + + +I V ATD D
Sbjct: 1999 IPVEIRVSDVNDNAPVFEEYPFRARV-----SIGT-----QPEKNIVRVVATDIDEGLNG 2048
Query: 151 KVAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQV 207
++ Y I P TG + D+ + Y L V A D +P R AR ++
Sbjct: 2049 EIVYSFLHEQEKPKFRIHPSTGAVTAALSLSQDNGKTYHLEVVARDKGNPPRSARGLIEL 2108
Query: 208 W---LQFNSPVL--QDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGR 262
L +PVL Q+E ++ A + + R+ +R+ +S G G
Sbjct: 2109 RVGDLADLAPVLKFQNETYEVVVGENCAAGTEVIRVTAVRSDGRRQRVSYSLGSGNESG- 2167
Query: 263 IVFALEKET 271
FA++++T
Sbjct: 2168 -TFAIDEDT 2175
>gi|195437460|ref|XP_002066658.1| GK24450 [Drosophila willistoni]
gi|194162743|gb|EDW77644.1| GK24450 [Drosophila willistoni]
Length = 5118
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 116/265 (43%), Gaps = 40/265 (15%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET 94
N ++TF+ +NP + E +SG + V +G +DRE+ +Y L + A+D G +AET
Sbjct: 2927 ANASYTFS-ENPGN---KFKIEPQSGNITV-AGHLDREQQDEYILKVVASD--GAWRAET 2979
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GD 150
+T+ + D+NDN+P F Y F +L+ H F +G + ATD D
Sbjct: 2980 PITITIQDQNDNAPEFEHSFYSFSFPELQ--------HAVAF--VGQIIATDRDKQGPNS 3029
Query: 151 KVAYKLAVPSNLVVIVPQTGELL----LTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQ 206
++Y L PS + I P TGE+ + ++ Y LT+ A D P Y+ Q
Sbjct: 3030 VISYSLQQPSPMFSIDPGTGEIFSKKRIEYKRSHEENIYALTILATDNGKPPLYSECMVQ 3089
Query: 207 VWLQFNS----PVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGR 262
+ + NS P + + L + + RI + T ++ D
Sbjct: 3090 ITI-VNSNNSPPKFEQAEYLSPLPEHARPGQRIVRVHATD----------NKKDSGSNNE 3138
Query: 263 IVFALEKETEREKFKIRDENPWITV 287
I +AL + F I + WIT+
Sbjct: 3139 IDYALVSANQSAYFGINKHDGWITL 3163
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 103/218 (47%), Gaps = 36/218 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFAL-KNPTTHEIRNSTESKSG 60
EN+ +GT V + ++ + + + R + GN+ F L K P H +R
Sbjct: 408 ENAANGTVVAAVSVIDSDDGPNGETITR--LVSGNELGHFRLDKTPLFHIVR-------- 457
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+G +DREE+++Y+L + A D GI A H+ +DV D ND+ PVF + Y +
Sbjct: 458 ----VNGVLDREEISKYNLTVVALD-GGIPARSATAHLIIDVNDVNDHEPVFEKSEYTAV 512
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL--VVIVPQTGELL 173
+ +L K S + S++ATD D ++ Y++ + L + TG L+
Sbjct: 513 LSELA----------PKGSFVASIAATDEDTGVNAQIHYEILSGNELKWFTMDSATG-LI 561
Query: 174 LTGDPPSDDVE--YELTVEAHDLQSPSRYAREPAQVWL 209
+T +P +V+ EL++ A D +YA +V +
Sbjct: 562 VTSEPLDREVQDSVELSISARDGGPNPKYAYTQLKVTI 599
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 85/177 (48%), Gaps = 32/177 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ +S+ G+ N F L+ T + I N T +DRE ++Y + I +D
Sbjct: 1837 ITFSLVSGH-NGKFLLEPTTGNLILNDT-------------LDRETKSKYDVRIRVSD-- 1880
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G+ ET++ ++V D NDN P+F + VY F + + + K +G V ATD
Sbjct: 1881 GVQYTETNIIIEVNDTNDNPPMFDETVYSFDIPE----------NAPKGFQVGQVVATDN 1930
Query: 148 DGDK---VAYKLAV--PSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
D + V+Y + +++ + PQTG L LT ++V+ Y L V+A D PS
Sbjct: 1931 DLGQNGLVSYTVVSDWANDVFSLNPQTGMLTLTARLDYEEVQHYILLVQAQDNGQPS 1987
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 70/146 (47%), Gaps = 19/146 (13%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
+Y I GN +H F L T N + S + L T+G++DRE Y+L I+A D
Sbjct: 203 QYEIVDGNVDHKFRLVTTT-----NPSGDTSYLHLETTGNLDRESRGYYNLNISARDGGS 257
Query: 89 INK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ V V +LD NDN P+F D +LN V + + + +V A+D+
Sbjct: 258 PPRMGYLQVNVTILDVNDNPPIFDHS-------DYSVNLNETV---QPGTPVLTVMASDS 307
Query: 148 D-GD--KVAYKLAVPSNLVVIVPQTG 170
D GD K+ Y LA + + P+TG
Sbjct: 308 DMGDNGKLTYYLAETEHQFTVDPETG 333
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 18/140 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGI---NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
L T +DRE +A Y +++ A D +G A V + V D NDNSP F K Y + +
Sbjct: 670 LTTRHTLDRETMANYEILVIARD-QGAPIPQSATATVYLSVADINDNSPEFYPKHYIYTL 728
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADGDK--VAYKL-AVPSNLVVIVPQTGEL-LLT 175
S+ S ++ S+ +V+ATD D DK +AY L + L + TG + LL
Sbjct: 729 --------SSGSDSERGKSLLNVTATDLDNDKESIAYTLESGGEGLFHVDASTGSVQLLA 780
Query: 176 GDPPSDDV--EYELTVEAHD 193
G D+ Y LT+ A D
Sbjct: 781 GHGHGSDLMSHYRLTISARD 800
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I QG+ N FA+ + KSG L T+ IDRE A Y L+I A+
Sbjct: 864 YIILQGDKNENFAI------------DRKSG-RLTTARPIDREAQASYQLIILASSPDFS 910
Query: 90 NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+ + V + V+D NDN+P F+Q + ++
Sbjct: 911 SYGKCLVRISVIDVNDNAPSFAQDLPSMLI 940
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 80/178 (44%), Gaps = 29/178 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYSI G+ NH F++ T GV+ V +++ E A+Y+L + A D
Sbjct: 2302 IRYSILTGDQNHDFSIGEDT------------GVVRVAK-NLNYERKARYTLTVRAEDCA 2348
Query: 88 GINKAE--THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
N A +T+ +LD NDN P F Y V +++++ N + + +V A
Sbjct: 2349 IENSASDVAELTISILDINDNRPTFLDSPYLARV--MENTVPPNGGY------VLTVKAY 2400
Query: 146 DAD----GDKVAYKLAVP-SNLVVIVPQTGEL-LLTGDPPSDDVEYELTVEAHDLQSP 197
DAD +V Y L S+L I TGE+ LL EY LT+ A D P
Sbjct: 2401 DADTPPLNSQVRYFLKEGNSDLFRINASTGEISLLKPLDRESQSEYILTLVAMDTGLP 2458
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 103/269 (38%), Gaps = 66/269 (24%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YS+ GN+ F L + T L + +DRE + L I A D
Sbjct: 1298 VYYSLFSGNEGGHFNLDSATGQ-------------LSLARHLDRESQDLHVLTIVARDAA 1344
Query: 88 GIN--KAETHVTVDVLDENDNSPVFSQ---------------KVYRFIVGDLKSSLNSNV 130
+ + T +T+ VLDENDN+P F+Q ++ RF D LNS V
Sbjct: 1345 LVQPLSSNTTITIVVLDENDNAPEFTQSSSEVSVPETSPIGTELMRFRASDADQGLNSQV 1404
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDV-EYELTV 189
+ S++A G++ + I +G L L +D+ Y L +
Sbjct: 1405 --------VFSITA----GNR--------RDTFHIDSISGSLYLHKSLDYEDITRYSLNI 1444
Query: 190 EAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVR---P 246
A D +PS + L +N ++ D D P R++ + P
Sbjct: 1445 TASDCGTPSLF------TTLLYNVLIVDDN------DNAPVFPSTAIVRQIKEGIALKTP 1492
Query: 247 TKRIDFSETDGEMEGRIVFALEKETEREK 275
+ + D E+ G++ +A+ K+ E+
Sbjct: 1493 IVTVTADDPDSELNGKVTYAISKQEPTEE 1521
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI +GN + F + G L V S +DREE Y+L + D
Sbjct: 1072 ISYSIIEGNGDKVFGI-------------FPDGYLFVRS-PLDREERDYYALTVACEDAG 1117
Query: 88 GINKA-ETHVTVDVLDENDNSPVFSQKVYRFIV 119
+++ + V + VLDENDN+P F+ + F +
Sbjct: 1118 YPSRSSQVPVVIHVLDENDNAPQFTNSTFTFSI 1150
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 26/121 (21%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
YSI GN N +F + +S E K+ LL DRE +A Y+L+I A D G+
Sbjct: 3564 YSIINGNLNQSFRID-------AHSGEIKTAALL------DRESIAHYNLIIGAIDT-GL 3609
Query: 90 --NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+T+ + D NDN P F+ + + + + + +SI +++ATD
Sbjct: 3610 PPQTGSAELTITITDVNDNGPTFAPEALQGYIAE----------NEPPGTSIMTLAATDP 3659
Query: 148 D 148
D
Sbjct: 3660 D 3660
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 14/91 (15%)
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRF 117
G+L V + +DRE + Y L ITA D +G T + + +LDENDNSPVF K Y
Sbjct: 2217 GLLRVVNA-LDRELCSSYVLNITAQD-RGEPPQSTTTRLLIRILDENDNSPVFDPKQYSA 2274
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
V + N+++ + + VSATD D
Sbjct: 2275 SVAE-----NASIG-----AMVLQVSATDVD 2295
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 88/198 (44%), Gaps = 39/198 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+ T+ +DREE+A Y+LV+ A D +G+ + V + +LD+NDN P F++
Sbjct: 2847 IYTTMRLDREELADYALVVEAVD-QGVPQLTGTASVMIHLLDKNDNPPKFTRL------- 2898
Query: 121 DLKSSLNSNVSHWKKFSS-IGSVSATDAD---GDKVAYKLAV-PSNLVVIVPQTGELLLT 175
+ NV+ + S + V+++D D +Y + P N I PQ+G + +
Sbjct: 2899 -----FSLNVTENAELGSFVIRVTSSDLDLGANANASYTFSENPGNKFKIEPQSGNITVA 2953
Query: 176 G--DPPSDDVEYELTVEAHD------------LQSPSRYAREPAQVWLQFNSPVLQDEQL 221
G D D EY L V A D +Q + A E + F+ P LQ
Sbjct: 2954 GHLDREQQD-EYILKVVASDGAWRAETPITITIQDQNDNAPEFEHSFYSFSFPELQHAVA 3012
Query: 222 L--QMI--DRKSEAPHRI 235
Q+I DR + P+ +
Sbjct: 3013 FVGQIIATDRDKQGPNSV 3030
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 14/101 (13%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ ++R+ I+ GN+ F S ++G +++ +D + + +Y L IT
Sbjct: 3241 PNGILRFGISGGNERQDF------------SVNEQTGAIIIQHA-LDYDLIQEYHLNITV 3287
Query: 84 TDVKGINKAETHV-TVDVLDENDNSPVFSQKVYRFIVGDLK 123
D+ + +T + T+ + D NDN PVF+Q Y + + K
Sbjct: 3288 RDLGFKSLTDTAILTIILTDVNDNPPVFNQTEYHSYIAENK 3328
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
LV Y++ N F+L NP T G+L +T+ +D EEV Y L++ A D
Sbjct: 1937 LVSYTVVSDWANDVFSL-NPQT-----------GMLTLTA-RLDYEEVQHYILLVQAQDN 1983
Query: 87 KGINKAET-HVTVDVLDENDNSPVFSQKVY 115
+ + T V +VLD NDN+P+F Y
Sbjct: 1984 GQPSLSNTITVYCNVLDLNDNAPIFDPMSY 2013
>gi|340728239|ref|XP_003402435.1| PREDICTED: protein dachsous-like [Bombus terrestris]
Length = 3327
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 115/244 (47%), Gaps = 36/244 (14%)
Query: 69 IDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE + +++L + ATD A V V VLD+NDN P F + Y F DL +L
Sbjct: 1017 LDRETLDRHALTVLATDNGSPAATASASVLVTVLDDNDNDPRFEKDFYGF---DLLENLP 1073
Query: 128 SNVSHWKKFSSIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE 184
S + +GSVSA+D D K A Y + ++ + P TGE + T +P + +
Sbjct: 1074 SG-------TLVGSVSASDPDLGKNALLRYAVVQANSSFTVDPDTGE-ITTKEPLDRETK 1125
Query: 185 --YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRR 239
+EL +EA D +PSR AR P +V + NSP + D Q ++ + E P E R
Sbjct: 1126 GVHELVLEARDQGTPSRAARVPLKVTVLDVNDNSPEIVDPQ-GDVVSVREEQPPGTEVAR 1184
Query: 240 VTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
V RA+ +TD + + + K+ + + + + +P G +R K
Sbjct: 1185 V-RAL---------DTDLGENASVTYTILKDRDSDGYNVFTIDPI-----TGMIRTKAVL 1229
Query: 300 DFEE 303
D EE
Sbjct: 1230 DHEE 1233
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 120/302 (39%), Gaps = 73/302 (24%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN F L +S +G+L ++ ++DRE V++Y L I+A D K
Sbjct: 1722 IYYSIVGGNIGAKFIL------------DSITGMLSMS--NLDREAVSKYILTISAKD-K 1766
Query: 88 GINKAET--HVTVDVLDENDNSPVFSQKVYR---------------------FIVGDLKS 124
G ET ++TV VLD NDN+P F Q Y F G
Sbjct: 1767 GRPSLETRCNLTVIVLDVNDNAPSFVQNQYTESRPRGPVPSSEYPGFALSNGFSYGSANY 1826
Query: 125 SLNSNVSHWKKF--------SSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELL 173
N S + SS+ SV ATD D K+ Y + ++ + V ++
Sbjct: 1827 PTNYYPSKYVATISEDVAPDSSVMSVRATDPDQGVNGKITYAIGEETSWLFRVDNLTGVI 1886
Query: 174 LTGDPPSDDVE--YELTVEAHDL-QSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDR 227
T P + + Y V A D + +R P ++ + N+PV
Sbjct: 1887 TTAGPLDRERQSSYNFVVVATDSGKYDARSTTIPVEIRVSDVNDNAPVFD---------- 1936
Query: 228 KSEAPHRIEKRRVTRAVRPTK---RIDFSETDGEMEGRIVFALEKETEREKFKIRDENPW 284
E P R RV+ +P K R+ ++ D G +V++ E E+ KF+I
Sbjct: 1937 --EYPFRA---RVSIGTQPEKNILRVVATDADDGPNGEVVYSFLHEQEKPKFRIHPSTGA 1991
Query: 285 IT 286
+T
Sbjct: 1992 VT 1993
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 60/125 (48%), Gaps = 23/125 (18%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL---LVTSGDIDREEVAQYSLVITATD 85
RY I GN F L + H R+ GVL L SG +DRE ++Y LVI A D
Sbjct: 148 RYEIVSGNHADAFRL---SQHRGRD------GVLYLDLQNSGSLDREARSRYHLVIEALD 198
Query: 86 VKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
++ HV V V D NDN P+F+Q Y + + N+ V + + +V+A
Sbjct: 199 GGAPPLRSRLHVNVTVQDVNDNPPIFNQTRYVASIAE-----NATVG-----TPVLAVNA 248
Query: 145 TDADG 149
TD+D
Sbjct: 249 TDSDA 253
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D E ++YSL + A+D G+++A T + V V D NDN+P F Q Y + + + L
Sbjct: 2350 LDAETRSEYSLQVIASD--GVHEATTDLIVRVTDLNDNAPRFQQSAYIATLPEGRGDLQ- 2406
Query: 129 NVSHWKKFSSIGSVSATD----ADGDKVAYKLAVPSNLVVIVPQTGELLL--TGDPPSDD 182
I +V+ATD D +V Y L + + P TG L + T P
Sbjct: 2407 ---------EILTVNATDDDLTEDNSRVRYYLLKATKGFSVHPATGVLTVNRTAIPRPLP 2457
Query: 183 VEYELTVEAHDLQSP 197
E EL + A D P
Sbjct: 2458 KEVELAIVAEDYGKP 2472
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 80/182 (43%), Gaps = 30/182 (16%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P +RY + Q N N F + + +SG L + +D E ++ L+I A
Sbjct: 886 PSHPIRYVLGQ-NSNDLFGI------------DGRSGELYLAR-RLDYETQQRHGLLIRA 931
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G++ A ++V+V D NDN PVF + Y V + K S I V+
Sbjct: 932 LDGAGLS-ANLSLSVEVQDVNDNPPVFERNEYHVEVPE----------GAKLDSQILQVT 980
Query: 144 ATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSR 199
A D D +++Y+L S I P TG + L + ++ + LTV A D SP+
Sbjct: 981 AVDLDTGNNARLSYRLQ-GSTAFRISPNTGWIYLAQILDRETLDRHALTVLATDNGSPAA 1039
Query: 200 YA 201
A
Sbjct: 1040 TA 1041
>gi|291244988|ref|XP_002742375.1| PREDICTED: hedgling-like [Saccoglossus kowalevskii]
Length = 2697
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 103/217 (47%), Gaps = 33/217 (15%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS +GT V I+ + + + YSI G + + FA+ +S SG
Sbjct: 2334 LENSAAGTLVN--TIVATDLDEAENGRIIYSIVSGENLNHFAI------------DSDSG 2379
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQKVYRFIV 119
+ V DIDRE YSL ATD ++ +E V + VLDENDNSPVF+ VY
Sbjct: 2380 DIFVAVSDIDRENFDYYSLTCKATDNGDLSLFSEATVLITVLDENDNSPVFTLDVYE--- 2436
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA-YKLAVPSNLVV------IVPQTGEL 172
+ + NS V +S+ +SATD D D A + ++P++ ++ + +GE+
Sbjct: 2437 --TQLTENSPVG-----TSVTVISATDIDQDINADIRYSIPASQIIANEYFKVDSTSGEI 2489
Query: 173 LLTGDPPSDDVEY-ELTVEAHDLQSPSRYAREPAQVW 208
+ SD + Y E TV A D +P+ V+
Sbjct: 2490 TVKFPIDSDTIPYVEFTVYAEDSGAPTMRGTATVLVY 2526
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 113/268 (42%), Gaps = 45/268 (16%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
H + Y IT GND F L + TT +I + + ++DRE + Y+L IT
Sbjct: 1940 HGDLSYFITDGNDEQAFML-DETTGDI------------IIALNLDRERTSSYALEITVF 1986
Query: 85 DVKGINKAETH-----VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSI 139
D G N +T + +++ DENDNSP FSQ Y V D ++ +S+
Sbjct: 1987 D-NGDNVDDTFNDTMTLNIEITDENDNSPAFSQMQY---VADTDENIAVG-------TSV 2035
Query: 140 GSVSATDAD---GDKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
V ATD D D + Y + + I TG + D ++ + Y ++A D
Sbjct: 2036 TQVVATDRDIGTNDDIVYSIIAGLGQGYFSIQSDTGVINTASDIDAELMSLYSFHIQAVD 2095
Query: 194 LQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSE------APHRIEKRRVTRAV 244
SP + + Q+ L N+PV ++ + S + ++ +
Sbjct: 2096 GGSPQKTSYAVVQIIINDLNDNTPVFVPATVVANVYEDSAENDQVYTMYAMDDDVDSDGG 2155
Query: 245 RPTKRIDFSETDGEMEGRIVFALEKETE 272
P+ + S+T GE+ + L++ET+
Sbjct: 2156 DPSNQFRISDTTGELTVSGI-GLDRETD 2182
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 19/99 (19%)
Query: 22 KHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVI 81
HPH V+ IT GN F++ + ++G++ TS +DRE +A Y+L +
Sbjct: 1726 SHPHGQVKCEITAGNSEGHFSI------------DGETGIIYTTSL-LDRENIASYTLTV 1772
Query: 82 TATDVK-----GINKAETHVTVDVLDENDNSPVFSQKVY 115
TATD ++ +E V + V DENDN P + VY
Sbjct: 1773 TATDSTITLGDQLSSSE-DVIITVEDENDNIPKCNPSVY 1810
>gi|157108477|ref|XP_001650243.1| cadherin [Aedes aegypti]
gi|108884003|gb|EAT48228.1| AAEL000700-PA [Aedes aegypti]
Length = 3131
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 26/205 (12%)
Query: 69 IDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+DRE+ +Y++ + +D G+ A THV V VLD NDN+P+F++++Y F + +
Sbjct: 744 LDREDQERYNITVIVSD-NGVPTLTATTHVIVSVLDANDNNPIFAKQLYEFQIEE----- 797
Query: 127 NSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVV-IVPQTGELLLTGDPPSDD 182
+ ++ S IG ++ATDAD V Y L +PSN I P +GE + T D +
Sbjct: 798 -----NMRRGSVIGLITATDADAGINAVVRYSL-IPSNTSFQINPISGE-ITTRDRLDRE 850
Query: 183 VE--YELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQMIDRKSEAPHRIEK 237
+ Y+L VEA D +P R +R ++ + NSP + D Q ++ + E P E
Sbjct: 851 TKSIYDLVVEARDQGTPYRSSRVSIKIKILDVNDNSPEIVDPQ-EDVVSVREEQPIGTEV 909
Query: 238 RRVTRAVRPTKRIDFSETDGEMEGR 262
RV RA+ ++ S T ++GR
Sbjct: 910 VRV-RAIDRDYGVNASITYSILKGR 933
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 19/154 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQK 113
+SKSGV+ T+G DRE + Y+ ++ ATD N V V V+ D NDN PVF +
Sbjct: 1614 DSKSGVI-TTAGHFDRERQSIYNFMVVATDGGRYNARSQSVQVQVIIADVNDNKPVFDKY 1672
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA-VPSNLVV-IVPQ 168
++ +G L + ++ +SATD D ++ Y L P+N I P
Sbjct: 1673 PFKEQIGAL----------VQPGQTLLHISATDVDQGSNGEIVYSLNDNPNNAKFRINPN 1722
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYA 201
TG L T S++ + V A D +P + A
Sbjct: 1723 TGALSATQSLASENGRLLHIEVTARDKGNPPQVA 1756
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 30/128 (23%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
+ + I GND++ F + P+ +LLV S +DRE+ Y L + T+
Sbjct: 2260 IAFEIIDGNDDNCFEISYPS-----------GAILLVKS--LDREKTDYYELRLVVTEPG 2306
Query: 86 ----VKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG 140
KG+N + VT+ V D NDN+P F Y + + + K+ SIG
Sbjct: 2307 ATMMYKGMNMSSAIRVTITVEDANDNAPEFQPGPYEVAISE---------TAPIKY-SIG 2356
Query: 141 SVSATDAD 148
+SA DAD
Sbjct: 2357 QISAVDAD 2364
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 61/113 (53%), Gaps = 17/113 (15%)
Query: 40 TFALKN--PTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVT 97
T+ L N P T + S +S+SG L + +D E V +++L++TA+D GI T++T
Sbjct: 594 TYRLSNNGPATGNLF-SIDSRSGHLSLAR-PLDYETVQRHTLIVTASD-SGIPSLSTNLT 650
Query: 98 --VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
V+V D NDN+PVF + Y V + S SN S I V+A DAD
Sbjct: 651 ILVEVQDVNDNAPVFERSEYAIKVSE---STPSN-------SQIMQVTAVDAD 693
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 11/122 (9%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
+S SGV+ ++ D EE +YS + ATD G +K V + + ++ SP F+++ Y
Sbjct: 2504 DSVSGVI-NSNAVFDYEEKNRYSFTLRATDTGGKSKT-VKVRIMIESRDEFSPQFTERTY 2561
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGEL 172
RFI LK+ + H +G V+ATD D ++ Y+L + TG +
Sbjct: 2562 RFI---LKT---PDTGHLPVGYVVGHVTATDRDRGPDGRIVYQLTTQHPYFKMNRTTGAI 2615
Query: 173 LL 174
L+
Sbjct: 2616 LV 2617
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 106/262 (40%), Gaps = 47/262 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI+ GN + F++ + +G L T+ +DRE A+Y L ITA D
Sbjct: 1494 ITYSISGGNIGNKFSI------------DMNTGAL--TARPLDREIHARYVLQITAQDRG 1539
Query: 88 GINKAETH--VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ H +TV V DENDN P F + Y + D + + + V +V A
Sbjct: 1540 SPTSHQGHCNITVRVEDENDNDPKFELQKYIATI-DEDAPIGTTVL---------TVKAV 1589
Query: 146 DAD---GDKVAYKLA-VPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSPSR 199
DAD ++ Y LA V L I ++G + G D + Y V A D R
Sbjct: 1590 DADIGINARIVYSLANVTEWLFDIDSKSGVITTAGHFDRERQSI-YNFMVVATD---GGR 1645
Query: 200 YAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTK---RIDFSETD 256
Y V +Q ++ D D K K ++ V+P + I ++ D
Sbjct: 1646 YNARSQSVQVQV---IIADVN-----DNKPVFDKYPFKEQIGALVQPGQTLLHISATDVD 1697
Query: 257 GEMEGRIVFALEKETEREKFKI 278
G IV++L KF+I
Sbjct: 1698 QGSNGEIVYSLNDNPNNAKFRI 1719
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSG-DIDREEVAQYSLVIT 82
P+ V Y I GND F++ + +G+L + + D DR Q++LVI
Sbjct: 2369 PNSEVVYQIVSGNDGGWFSI------------DLITGLLYINNNLDYDRGP-TQFNLVIR 2415
Query: 83 ATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
A D + K H +++ DENDN P F Y VG+
Sbjct: 2416 ACDSHVLPKCSVHPFVINLTDENDNEPQFPVPEYLEFVGE 2455
>gi|354490726|ref|XP_003507507.1| PREDICTED: protocadherin Fat 1-like [Cricetulus griseus]
gi|344246355|gb|EGW02459.1| Protocadherin Fat 1 [Cricetulus griseus]
Length = 4589
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 104/228 (45%), Gaps = 35/228 (15%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G+ V H V Y I GN F + NP + I +T D+D
Sbjct: 1682 GIGTFVGMVSAHSQSSVMYEIKDGNVGDAFDI-NPHSGSI------------ITQKDLDF 1728
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E ++ Y+L + T++ G++ A T VTV + DENDN PVF++ Y V + +S+NS V
Sbjct: 1729 ETLSIYTLTVQGTNMAGLS-ANTTVTVHMQDENDNPPVFTRAEYSGFVSE-SASVNSVVL 1786
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVE 184
+ + + ATDAD + + Y++ PS N I TG + +L+ D V
Sbjct: 1787 TDRNVPLV--IRATDADRESNALLVYQIVEPSVHNYFAIDATTGAIHTVLSLDYEETRV- 1843
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQ----------FNSPVLQDEQLL 222
+ TV+ HD+ +P +A A V + F+ P+ + LL
Sbjct: 1844 FHFTVQVHDMGTPRLFAECAANVTIHVIDINDCPPVFSKPLYEASLLL 1891
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 103/234 (44%), Gaps = 51/234 (21%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + YSI GN++ F++ +SK+G + + +
Sbjct: 3247 GTEVLQVYAASRDIEANAEITYSIISGNEHGKFSM------------DSKTGAIFIIE-N 3293
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L + ATD ++ T V ++V D NDN+PVFSQ Y +VG+ ++L
Sbjct: 3294 LDYESSHEYYLTVEATDGGTPSLSDVAT-VNINVSDINDNTPVFSQDTYTTVVGE-DAAL 3351
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
S+ ++ A DADG + Y + + I P GE+ +T +
Sbjct: 3352 E---------QSVITIMADDADGPSNSHIRYSIIEGNQGSPFTIDPIRGEVKVTKPLDRE 3402
Query: 182 DVE-YELTVEAHDLQSPSR-------------------YAREPAQVWLQFNSPV 215
+ Y LTV+A D +P R ++R+ V +Q N PV
Sbjct: 3403 TISGYTLTVQAADNGNPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVIIQENKPV 3456
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 93/219 (42%), Gaps = 28/219 (12%)
Query: 28 VRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+RY I G+ + F + + +R T+ + +L +RE Y+L+I A
Sbjct: 71 IRYKIISGDSENLFKAEEHVLGDFCFLRIRTKGGNTAIL------NREVRDHYTLIIKAV 124
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+ +A T V V VLD ND P+FS Y SL N + +SI VSA
Sbjct: 125 ERNSNAEARTKVRVQVLDTNDLRPLFSPTSYSV-------SLPENTAIR---TSIARVSA 174
Query: 145 TDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHDLQSPS 198
TDAD + Y +++ I P +G ++LTG D +E YEL + A D +
Sbjct: 175 TDADIGTNGEFYYSFKDRTDMFAIHPTSGVVVLTGR--LDFLETQLYELEILAVD-RGMK 231
Query: 199 RYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEK 237
Y + V Q + MI + +P +EK
Sbjct: 232 LYGSSGISSMAKLTVHVEQANECAPMITAVTLSPSELEK 270
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1175 LTYKITSGNPQGFFSI------------HPKTGLITTTSRKLDREQQDEHILEVTVTD-N 1221
Query: 88 GINKAET--HVTVDVLDENDNSPVFSQKVYRF 117
G T V V +LDENDN P F QK Y+
Sbjct: 1222 GTPPRSTIARVIVKILDENDNKPQFLQKFYKI 1253
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 107/251 (42%), Gaps = 38/251 (15%)
Query: 50 EIRNSTESKSGV----------LLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVT 97
EIR S SGV ++ TS +DRE + Y L + ATD +G+ + V
Sbjct: 1069 EIRYSIRDGSGVGVFRIDEVTGVIETSDRLDRESTSHYWLTVYATD-QGVVPLSSFIEVY 1127
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAY 154
++V D NDN+P S+ VY + + + K S+ + A D D DK+ Y
Sbjct: 1128 IEVEDVNDNAPQTSEPVYYPEI----------IENSPKDVSVVQIEAFDPDSSSSDKLTY 1177
Query: 155 KLAV--PSNLVVIVPQTGELLLTG---DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL 209
K+ P I P+TG + T D D E+ L V D +P R A+V +
Sbjct: 1178 KITSGNPQGFFSIHPKTGLITTTSRKLDREQQD-EHILEVTVTDNGTPPR--STIARVIV 1234
Query: 210 QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVR--PTKRIDFSETDGEMEGRIVFAL 267
+ Q LQ K P R EK R+V+ P R+ ++ D + +++
Sbjct: 1235 KILDENDNKPQFLQKF-YKIRLPER-EKADGERSVKREPLYRVIAADKDEGPNAELSYSI 1292
Query: 268 EKETEREKFKI 278
E+ E +F I
Sbjct: 1293 EEGNEHGRFSI 1303
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 77/175 (44%), Gaps = 36/175 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N I+N + + +DRE+ Y L ITATD
Sbjct: 2955 VTYFITGGDALGQFAVEN-----IQNEWK------VYVKKPLDREQKDSYLLTITATD-- 3001
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD--LKSSLNSNVSHWKKFSSIGSVSAT 145
G ++ V V VLD NDNSPV + +Y + + L L + VSAT
Sbjct: 3002 GTFSSKARVEVKVLDANDNSPVCEKTLYSDTIPEDALPGKL------------VMQVSAT 3049
Query: 146 DAD---GDKVAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHD 193
DAD ++ Y L + + P TGEL P D E Y L V+A D
Sbjct: 3050 DADIRSNAEITYTLFGSGAEKFKLNPDTGELRTLA--PLDREEQAVYNLLVKATD 3102
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 24/156 (15%)
Query: 6 SGTGVKGLPIL---VASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL 62
S V G P+L S P++ V Y Q NH+ +H+ +S +G++
Sbjct: 2294 SEAAVIGTPVLQVKATDSDSEPNRGVSY---QMFGNHS------KSHD-HFHIDSNTGLI 2343
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+ +D E+ Q+ + + A D G+ ++ VTVDV D NDN P+F Q++Y
Sbjct: 2344 SLVRA-LDYEQFQQHKVFVRAVD-GGMPPLSSDVIVTVDVTDLNDNPPLFEQQIY----- 2396
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKL 156
++ ++ + +H + + A +D DK+ Y +
Sbjct: 2397 --EAKISEHAAHGHFVMCVKACDADSSDLDKLEYSI 2430
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 14/87 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GND+ F + + +SG+L V S +DRE +Y+L IT D+
Sbjct: 755 YAISGGNDDSCFTI------------DMESGMLKVLS-PLDREVTDKYTLNITVYDLGIP 801
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVY 115
+A + V VLD NDN P F Q+ Y
Sbjct: 802 QRAAWRLLDVTVLDANDNPPEFLQESY 828
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 133/322 (41%), Gaps = 62/322 (19%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPT-THEIRNSTESKSGVLLVTSG 67
GVK + + + P + YSIT+GN F++ T T I+N+T+ +S
Sbjct: 1896 GVKIITVNATDADSRPFSQLIYSITEGNIGEKFSMDYKTGTITIQNTTQLRS-------- 1947
Query: 68 DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+Y L + A+D G + T V ++V + ++ F+Q Y +V +
Sbjct: 1948 --------RYELTVRASD--GRFASMTSVKINVKESKESPLKFTQDFYTAVVKE------ 1991
Query: 128 SNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE--Y 185
N + K + I ++ + + + Y + P I +G L TG P + +
Sbjct: 1992 -NTTESKTLAVITAIG--NPINEPLFYHILNPDRRFKISHTSGVLSTTGIPFDREQREAF 2048
Query: 186 ELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTR 242
++ VE PS A +V ++ N+PV + ++ +E H I R VT
Sbjct: 2049 DVVVEVTKEHEPSAVAHVVVKVTIEDQNDNAPVFVNLPYYAVVKVDAEVGHVI--RYVTA 2106
Query: 243 AVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
R + R +GE+ + +++ + + +GD+ +KK+++ +
Sbjct: 2107 IDRDSGR------NGEVH---------------YYLKEHHDHFQIGPSGDISLKKQFEHD 2145
Query: 303 ELGPEKTIDFWVTINNQATNGG 324
L E + VT+ A +GG
Sbjct: 2146 TLNKE----YLVTV--VAKDGG 2161
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 27/125 (21%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET 94
G+ F L NP T E+R T +DREE A Y+L++ ATD G +
Sbjct: 3065 GSGAEKFKL-NPDTGELR------------TLAPLDREEQAVYNLLVKATDGGG-RSCQA 3110
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---K 151
+ + + D NDN+P F+ Y V + + + + V ATDAD K
Sbjct: 3111 TIVLTLEDVNDNAPEFTADPYTITV----------FENTEPGTLLTRVQATDADAGLNRK 3160
Query: 152 VAYKL 156
++Y L
Sbjct: 3161 ISYSL 3165
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 4/50 (8%)
Query: 69 IDREEVAQYSLVITATDVKGINK---AETHVTVDVLDENDNSPVFSQKVY 115
+DRE+ A Y+L + A D +G+ + A + V V VLD NDN PVF + Y
Sbjct: 3188 LDREQQAVYTLTLKAVD-QGVPRKLTATSTVVVSVLDINDNPPVFEYREY 3236
>gi|345485230|ref|XP_003425221.1| PREDICTED: LOW QUALITY PROTEIN: protein dachsous-like [Nasonia
vitripennis]
Length = 3357
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 92/185 (49%), Gaps = 23/185 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
+G +DRE + +YSL + ATD A + V VLD+NDN P F + +Y F +L
Sbjct: 1044 AGQLDRETLDRYSLTVLATDNGSPAATASASILVTVLDDNDNEPRFEKDLYAF---ELLE 1100
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSD 181
+L S + +G+VSA+D D K A Y + ++ + P TGE +T P D
Sbjct: 1101 NLPSGM-------LVGTVSASDTDLGKNALLRYAVVQANSSFAVDPDTGE--ITTREPLD 1151
Query: 182 ---DVEYELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHRI 235
+EL +EA D +PSR AR P +V + NSP + D Q ++ + E P
Sbjct: 1152 RESKAVHELVLEARDQGTPSRAARVPLRVSVLDVNDNSPEIVDPQ-GDVVSVREEQPPGT 1210
Query: 236 EKRRV 240
E RV
Sbjct: 1211 EVARV 1215
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 128/306 (41%), Gaps = 74/306 (24%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN F L ++ +GVL ++G +DRE V +Y L ++A D K
Sbjct: 1753 ISYSIISGNIGSKFKL------------DAVTGVL--SAGSLDREAVPKYVLTVSAKD-K 1797
Query: 88 GIN--KAETHVTVDVLDENDNSPVFSQKVYR-------FIVGDLKSSLNSNVSHWKKF-- 136
G +A ++TV VLD NDN+P F Y F GD ++ + ++ S K
Sbjct: 1798 GRPSLEARCNLTVVVLDVNDNAPSFLHNQYSEPRLRAAFAGGDFETYVAASFSQGKYSTS 1857
Query: 137 --------SSIGSVSATDAD---GDKVAYKLAVPS-------NLVVIVPQTGELLLTGDP 178
SSI V ATD+D K+ Y +A S NL ++ G L D
Sbjct: 1858 VSEDVAPESSIMQVRATDSDQGVNGKITYSIAEESSWLFRVDNLTGVITTAGSL----DR 1913
Query: 179 PSDDVEYELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQMIDRKSEAPHRI 235
+ L V + +R P ++++ N P+ + E P
Sbjct: 1914 EQQSLYRFLVVATDSGKYEARQTSVPVEIYIGDVNDNRPIFE------------EYPF-- 1959
Query: 236 EKRRVTRAVRPTK---RIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITV----- 287
K RV + +P + R+ ++ D G IV++ +E ++ KF+I +TV
Sbjct: 1960 -KARVPVSTQPGQNILRVKANDADDAANGEIVYSFPREQDKPKFRIHPSTGIVTVTSSLA 2018
Query: 288 DENGDV 293
ENG V
Sbjct: 2019 QENGRV 2024
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 107/251 (42%), Gaps = 56/251 (22%)
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
G +V +G +D E ++Y+L + A+D G+++A T +TV V D NDN P F Q Y +
Sbjct: 2363 GGRVVLTGKLDAELRSEYTLHVLASD--GLHEATTELTVRVTDLNDNPPRFEQVAYITTL 2420
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADG----DKVAYKLAVPSNLVVIVPQTGELLL- 174
+ + ++ + SV+ATD D + + Y+L P + +G LL+
Sbjct: 2421 SEERGNVQ----------EVLSVNATDDDSTDENNGIRYRLVRPMKGFTVHSVSGVLLVN 2470
Query: 175 -TGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPH 233
T P E EL++ A D P A V ++ N K+ P
Sbjct: 2471 RTALPKPLPKEIELSIIAEDSGKPPLSAI--CSVVVRLNG-------------LKNNVPG 2515
Query: 234 RIEKRRV----TRAVRPTKRIDFSETDGEM------------EGRIVFA--LEKETEREK 275
R K + TR K D DG + GR++ A L++ET RE+
Sbjct: 2516 REYKVSIKENATRGTSLMKLADVDLLDGTIVAGDEGGFFEVSRGRLILARPLDRET-RER 2574
Query: 276 FKIR----DEN 282
+ IR DEN
Sbjct: 2575 YVIRLGAKDEN 2585
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL---LVTSGDIDREEVAQYSLVITATD 85
RY I GN+ F L H R+ GVL L S +DRE A Y L++ A D
Sbjct: 149 RYEIVSGNEGEAFRL---AAHRGRD------GVLYLDLQNSAALDREARAGYQLLVEALD 199
Query: 86 VKGIN-KAETHVTVDVLDENDNSPVFSQKVY 115
++ HV V V D NDN P+F Q Y
Sbjct: 200 GGSPPLRSRLHVNVTVQDVNDNPPIFKQSRY 230
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 87/182 (47%), Gaps = 30/182 (16%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P +RYSI Q N N F + +++SG + + +D E ++ L+I+A
Sbjct: 916 PATPLRYSI-QHNSNELFGI------------DARSGEVYLAR-RLDYETQQRHRLMISA 961
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G++ A ++V+V D NDN PVF + Y V + + LN W+ I V+
Sbjct: 962 LDGAGLS-ANLSLSVEVQDVNDNPPVFERNEYHVEVSE-GARLN-----WQ----IVQVT 1010
Query: 144 ATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSR 199
A D D +++Y+L S + P +G + L G + ++ Y LTV A D SP+
Sbjct: 1011 AVDLDTGNNARLSYRLQ-GSGPFRVSPNSGWVTLAGQLDRETLDRYSLTVLATDNGSPAA 1069
Query: 200 YA 201
A
Sbjct: 1070 TA 1071
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 79/176 (44%), Gaps = 32/176 (18%)
Query: 38 NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVT 97
N +F++ ++ + S + LL +DRE+ ++YS+ + A K ++ A +
Sbjct: 1651 NVSFSIAKGVASDVFGVSSSGAVSLLAP---LDREKTSRYSVPVLARSSKLLDLATLEIF 1707
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAY 154
V LDENDNSP F+ G S V ++ + + +++ATDAD K ++Y
Sbjct: 1708 V--LDENDNSP-------EFVPG---SCYTLAVPENQENAVVHTLAATDADEGKNGEISY 1755
Query: 155 KLAVPSNL--------VVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAR 202
+ + N+ V V G L P +Y LTV A D PS AR
Sbjct: 1756 SI-ISGNIGSKFKLDAVTGVLSAGSLDREAVP-----KYVLTVSAKDKGRPSLEAR 1805
>gi|195437548|ref|XP_002066702.1| GK24627 [Drosophila willistoni]
gi|194162787|gb|EDW77688.1| GK24627 [Drosophila willistoni]
Length = 3471
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 104/216 (48%), Gaps = 25/216 (11%)
Query: 69 IDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE+ +Y L + ATD +A+T + + VLD NDN P F + Y F + +
Sbjct: 1079 LDREQRDRYQLTVMATDNGTPAAQAKTRIVIRVLDANDNDPKFKRSNYEFRIEE------ 1132
Query: 128 SNVSHWKKFSSIGSVSATDAD-GDKVA--YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE 184
+ ++ S +G V A+D D GD A Y L ++ I P TGE +T P D +
Sbjct: 1133 ----NMRRGSKVGIVQASDLDLGDNAAIRYSLMPQNSSFQIQPITGE--ITTKEPLDREQ 1186
Query: 185 ---YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHR--IE 236
Y+L VEA D SP R AR P ++ + N+P + D Q + R+ + P +
Sbjct: 1187 RELYDLLVEARDQGSPQRSARVPVRIHVTDVNDNAPEIADPQEDVVSVREEQPPGTEVVR 1246
Query: 237 KRRVTRAVRPTKRIDFSETDG-EMEGRIVFALEKET 271
R + R I +S G + +G +F+++ +T
Sbjct: 1247 IRAIDRDSGQNASITYSIVKGRDSDGHGLFSIDPQT 1282
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 63/136 (46%), Gaps = 31/136 (22%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL---LVTSGDIDREEVAQYSLV 80
P+ RY+I GN N F L +S + GVL L SG +DRE YSL+
Sbjct: 165 PYNTQRYNIVSGNVNDAFRL---------SSHRERDGVLYLDLQISGFLDRETTPAYSLL 215
Query: 81 ITATD-----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK 135
I A D ++G+ V + + D NDN P+F+Q Y V + NS V
Sbjct: 216 IEALDGGTPPLRGL----MTVNITIQDVNDNQPIFNQSRYFATVPE-----NSTVG---- 262
Query: 136 FSSIGSVSATDADGDK 151
+S+ V A+D D D+
Sbjct: 263 -TSVLQVYASDTDADE 277
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 122/270 (45%), Gaps = 39/270 (14%)
Query: 41 FALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTV 98
+AL N T + + +SKSG L+ T G +DRE + YS + ATD + A V +
Sbjct: 1947 YALANETQWQF--AIDSKSG-LITTVGKLDRELQSSYSFMALATDGGRYEVRSARVPVQI 2003
Query: 99 DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYK 155
+VLD NDN PVF + Y V L + ++ V A D D + ++ Y
Sbjct: 2004 NVLDVNDNKPVFERYPYMAQVPSL----------IQPGQTLVKVQAHDLDENLNGEITYS 2053
Query: 156 LAVPSNLVV--------IVPQTGELLLTGDPPSDDVEY-ELTVEAHDLQSPSRYAREPAQ 206
L S+ + I P TG L T S+ +L + A D +PS+++ +
Sbjct: 2054 LKSGSSSLKGNQLGKFRINPHTGALSATQSLASEAGHLIQLEIMARDKGNPSKFSEGLIE 2113
Query: 207 VWLQ---FNSPVLQDEQLLQMIDRKSEAPH--RIEKRRVTRAVRPTKRIDFSETDGEMEG 261
+ + + P+L+ + I K AP R+ + R+ ++++FS G +G
Sbjct: 2114 LMVGDQPVDQPILRFQNDTYRIKLKENAPAGTRLLQFVALRSDGRRQKVNFSFGAGNDDG 2173
Query: 262 RIVFALEKETEREKFKIRDENPWITVDENG 291
+F+L+ T ++R NP + +D +G
Sbjct: 2174 --IFSLDATTG----ELRVANPSL-LDYDG 2196
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 13/146 (8%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
LV +D E +Y L I A+D ++A T +T+ V +ENDN+PVF + L
Sbjct: 2458 LVLKRRLDYESQQEYQLEIIASDAA--HEARTMLTLRVGNENDNAPVFLAQQPPAYFAQL 2515
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKL--------AVPSNLVVIVPQTGE 171
+ + ++ + + +V+ATDADGD +++Y + PS+ VV V +
Sbjct: 2516 PLVEDEDDNNLRMDVELVTVNATDADGDDISQISYSIHPTVIGFNVNPSSGVVSVNMSRL 2575
Query: 172 LLLTGDPPSDDVEYELTVEAHDLQSP 197
+ PPS + +Y + V A D P
Sbjct: 2576 TSESLSPPSPNGDYFIRVVAQDSGKP 2601
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 68/133 (51%), Gaps = 18/133 (13%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V Y++ +G K+ T E+R S SG + + +G++D E+ + Y + ATD
Sbjct: 605 MVNYTLGEG-------FKHLTEFEVR----SASGEICI-AGELDYEQRSSYEFPVLATDR 652
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
G++ + + + D NDN PVF + Y + + +S S+ + I +V ATD
Sbjct: 653 GGLSTT-AMIKMQLTDINDNRPVFYPREYNVSLKEFQS--QSSQGQTNSNAPIVAVVATD 709
Query: 147 AD-GD--KVAYKL 156
D GD +V+Y++
Sbjct: 710 PDSGDFGQVSYRI 722
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 13/120 (10%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+SGV+ +SG D E+ +Y L + ATD+ G A + V++ ++ P F+++ YRF
Sbjct: 2896 QSGVV-TSSGVFDYEQRQRYDLELRATDMGG-KTARVALRVEIESRDEFQPQFTERTYRF 2953
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGELLL 174
+ L + V+ F +G V A+D+D +V Y+L+ P + +G +L+
Sbjct: 2954 V-------LPAAVALPAGF-VVGQVQASDSDSGPDGRVVYQLSAPHQHFKVNRSSGAVLV 3005
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 37/139 (26%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN + F S ++++G L S +DRE+ ++Y+L + A+D
Sbjct: 1840 ILYSIIGGNLGNKF------------SIDARTGELSARS--LDREQHSRYTLQVQASDRG 1885
Query: 88 GIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS---- 141
N + + ++T+ V D+NDN+P F Y +++ + ++IGS
Sbjct: 1886 KPNSLQGQCNITILVEDQNDNAPRFELPKY--------------IANIAEDAAIGSSVVR 1931
Query: 142 VSATDAD---GDKVAYKLA 157
+ A DAD ++ Y LA
Sbjct: 1932 IKANDADLGINARLVYALA 1950
>gi|432847518|ref|XP_004066062.1| PREDICTED: protocadherin Fat 1-like [Oryzias latipes]
Length = 4558
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 123/266 (46%), Gaps = 48/266 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y I GN N+ F + NP SGV+ VT +D E + Y L+I T++
Sbjct: 1625 IFYQIKAGNINNAFDI-NP-----------NSGVV-VTRQTLDYESNSHYKLIIQGTNMA 1671
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G+ + T + + + DENDN+PVF Q+ ++ ++ + S +NS V + + + A+DA
Sbjct: 1672 GL-ASNTTLLIHLKDENDNTPVFIQREFKGVISE-SSPVNSVVLTHENTPLV--IHASDA 1727
Query: 148 DGDKVA---YKLAVP--SNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSPS 198
D D+ A Y++ P N I TG + +T + D E + TV+ HDL P
Sbjct: 1728 DCDQNARLIYQIVEPYAHNYFAIDSSTGAIRIT---TTLDYEERSVFHFTVQVHDLGMPR 1784
Query: 199 RYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKR------IDF 252
+A A V + +ID +P ++ V PT + ++
Sbjct: 1785 LFAETAANV-------------TINVIDVNDCSPSFTQEVYEAVIVLPTYKGVEVIQVNA 1831
Query: 253 SETDGEMEGRIVFALEKETEREKFKI 278
+++D +++F++ + +KFKI
Sbjct: 1832 TDSDSGPNSKLLFSISEGNIGDKFKI 1857
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 103/232 (44%), Gaps = 55/232 (23%)
Query: 16 LVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVA 75
+V + K+PH ++Y+ +D + F + NP T L+ T+G I+ + A
Sbjct: 386 MVTAVPKYPH--LKYAFKSSSDKNRFTI-NPDTG------------LISTTGSINADSSA 430
Query: 76 QYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK 135
Q+ L + D NKA T V +DV+D N+N+P F Q Y K +++ NV
Sbjct: 431 QFELEVITDD----NKASTKVIIDVVDVNNNAPEFQQTSY-------KVTVDENVPIG-- 477
Query: 136 FSSIGSVSATDADGDKVAYKLAVPSNL----VVI-----VPQTGELLLTGDPPSDDVE-- 184
+S+ +V ATD D + Y +NL VI V T E+L D E
Sbjct: 478 -TSVITVKATDLDRGENGYVTYSITNLSPQPFVIDYFSGVITTSEVL--------DYELM 528
Query: 185 ---YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQ-LLQMIDRKSEAP 232
Y L V A D SP R E + V + N+ L D + L + +D + P
Sbjct: 529 PRIYNLKVRASDWGSPFRREVE-SSVTITLNN--LNDNRPLFENVDCEVTVP 577
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 55/101 (54%), Gaps = 15/101 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y I GN N+ F + NP SGV+ VT +D E + Y L+I T++
Sbjct: 1376 IFYQIKAGNINNAFDI-NP-----------NSGVV-VTRQTLDYESNSHYKLIIQGTNMA 1422
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
G+ + T + + + DENDN+PVF Q+ ++ ++ + S +NS
Sbjct: 1423 GL-ASNTTLLIHLKDENDNTPVFIQREFKGVISE-SSPVNS 1461
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 110/265 (41%), Gaps = 47/265 (17%)
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E++ Q+ L D V ++ +E VT+DV D NDN+P+F++ +Y V +L
Sbjct: 2276 LDHEDIQQHKLRARVVDGGVPALS-SEVTVTIDVTDLNDNAPMFTEFIYNTTVSELAPR- 2333
Query: 127 NSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSN----LVVIVPQTGELLLTGD-PPS 180
H+ + V A+D D D + A+ S I QTG +L++ P
Sbjct: 2334 ----GHF-----VIQVQASDPDSSDTKKLEFAIISGNDEQNFAINKQTGTILISNHRRPH 2384
Query: 181 DDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVL-QDEQLLQMIDRKSEAPHRIEKRR 239
Y L+V D V F++P Q + L+++ +E
Sbjct: 2385 MQPLYNLSVSVSDGVFIGSALVMVTVVGANFHNPTFSQTDSLVEL----------VENSP 2434
Query: 240 VTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
V V + ID D + G+I + + + R+KF I D+ +T+
Sbjct: 2435 VGTLVAQAQAID---PDEGIYGQITYEIVNDFARDKFSINDKGEILTL------------ 2479
Query: 300 DFEELGPEKTIDFWVTINNQATNGG 324
E L E T++ + I+ A +GG
Sbjct: 2480 --ESLDRENTVEKIIPISLMAKDGG 2502
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 14/116 (12%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G + L + AS K + + YSI GN++ F S +++SG + V
Sbjct: 3173 AVGAQLLRVQAASRDKEANAEISYSIISGNEHGMF------------SVDARSGDIFVIE 3220
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
+D E +Y + I ATD ++ V +++ D NDN PVFSQ VY ++ +
Sbjct: 3221 -PLDYETSHEYYITIEATDGGSPPLSDMATVNINLTDVNDNRPVFSQDVYAAVISE 3275
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 16/94 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
V+YSI GN F + +P E++ + + +DRE + Y+L + A+D
Sbjct: 3299 VQYSIVDGNQGSPFTI-DPLRGELKVARQ------------LDRERTSGYTLTVVASDNG 3345
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
V ++ + T + +D+ D NDN P+FSQ Y I+
Sbjct: 3346 VPPLSSSAT-INIDISDVNDNPPLFSQANYSLII 3378
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 56/108 (51%), Gaps = 16/108 (14%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE + Y L ITA+D GI A+ V V VLD NDN PV Q +Y V + +S
Sbjct: 2914 LDREVMDNYLLNITASD--GIFTAKAVVEVKVLDANDNDPVCEQLLYSESVPE-----DS 2966
Query: 129 NVSHWKKFSSIGSVSATDAD---GDKVAYKL-AVPSNLVVIVPQTGEL 172
I VSATDAD +++++L V + L +I TGEL
Sbjct: 2967 PAGRL-----ILQVSATDADIRSNAQISFELQGVGAELFIIDSDTGEL 3009
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 78/173 (45%), Gaps = 23/173 (13%)
Query: 28 VRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+RY I G++ + F ++ + +R T+ S +L +RE Y L + AT
Sbjct: 68 IRYKIISGDNENLFKAEDYLLGDFSFLRIRTKGGSTAIL------NREVKDHYMLTVKAT 121
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+ + T V V VLD ND P+FS Y + + N+ + +S+ V+A
Sbjct: 122 ERTTNFECRTRVKVQVLDTNDLRPLFSPTSYSISIPE-----NTAIR-----TSVAKVTA 171
Query: 145 TDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
TDAD + Y +++ + P +G + LTG + + YEL + A D
Sbjct: 172 TDADIGTNGEYYYSFREWTDMFAVHPTSGVVTLTGKLDYSETKLYELEILAVD 224
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 50 EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVT-VDVLDENDNSP 108
E R + ++G LLV S +DRE Y+L IT D+ K+ + + V +LD NDNSP
Sbjct: 760 ENRFIVDMETGWLLVYSA-LDREATDHYTLNITVYDLGVPQKSSSRLLDVKILDANDNSP 818
Query: 109 VFSQKVY 115
F Q Y
Sbjct: 819 QFLQDSY 825
>gi|348520328|ref|XP_003447680.1| PREDICTED: protocadherin Fat 2-like [Oreochromis niloticus]
Length = 4457
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 122/288 (42%), Gaps = 34/288 (11%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G P++ S+ V Y I GN N TF + + T L+ T G ++
Sbjct: 1666 GTPVVTVSASSP--AAVHYDIESGNWNGTFYINSYTG-------------LISTQGRLNY 1710
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E Y L +TA+ G + T V + V+DENDN+PVF Q+ Y+ +G+ + +NS V
Sbjct: 1711 ETCDSYKLRVTASTTAGA-VSRTVVHIYVVDENDNAPVFEQREYQGQIGE-SAHINSMVM 1768
Query: 132 HWKKFSSIGSVSATDADGDK-VAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYEL 187
+ + S +D D + + Y++ P L V + ++ P D EY
Sbjct: 1769 GERNTPLVIRASDSDRDSNSLLTYQILEPEALKVFRIDSSMGTISLISPLDFETKAEYLF 1828
Query: 188 TVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSE-APHRIEKRRVTRAVRP 246
TV+ D PS YA EPA+V + ++L + D + E + AVR
Sbjct: 1829 TVQVKDSGEPSLYAAEPAKVTV----------RILDLNDCPPQFTASAYESSIILPAVRD 1878
Query: 247 TKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVR 294
+ + + D + + +++ + F I ITV+ D R
Sbjct: 1879 AEVVRITAHDA--DSAVSYSITEGNLHNAFSIHPSTGLITVNNVSDFR 1924
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 85/177 (48%), Gaps = 31/177 (17%)
Query: 26 QLVRYSITQGNDNHTFALKN-PTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+++ S+ N TF++KN P T + K+G++ +T+G D E +Y + A
Sbjct: 380 HVLKVSVNSVPFNVTFSIKNNPDTSNFK--INPKTGII-ITTGKFDYERKDRYEFDVMAN 436
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+AETH+ V++ DENDNSP F+Q Y+ + + NS V SS+ V+A
Sbjct: 437 H----GEAETHIVVEITDENDNSPQFTQTSYQATLDE-----NSPVG-----SSVLKVAA 482
Query: 145 TDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDP------PSDDVEYELTVEAHDLQ 195
+D D K + + + +G L T DP S+ ++YEL + L+
Sbjct: 483 SDKDKGKNGF-------VTYTIANSGPLPFTIDPFTGIISTSEHLDYELMKRRYHLR 532
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 72/152 (47%), Gaps = 29/152 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GN++ F++ ++ SG L + +DRE Y L IT D+ GI
Sbjct: 745 YAISSGNEDGCFSI------------DTFSGDLRLVC-PLDRESKEFYILNITVYDL-GI 790
Query: 90 --NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
A + ++V+D NDN PVF Q Y V + N V+ S I + A D
Sbjct: 791 PQTSAWKFIAINVMDVNDNPPVFDQPRYVIHVPE-----NKEVN-----SVIFTCRAADL 840
Query: 148 DGD---KVAYKLAVPSNLVVIVPQTGELLLTG 176
D D KV Y L +++ + TGEL++TG
Sbjct: 841 DSDMSGKVQYSLLTTTDMFRMDEFTGELIVTG 872
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 70/136 (51%), Gaps = 17/136 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
L+ +DRE +Y+L +TATD G +A V V VLD NDNSP+ Q VY +V +
Sbjct: 2963 LIVKESLDREARDRYALRVTATD--GKFEAPISVDVHVLDINDNSPLCEQLVYTEVVME- 3019
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVP-SNLVVIVPQTGELL-LTGD 177
NS S + + VSA+D D +++Y L P ++ + +TGEL L
Sbjct: 3020 ----NSPSSVF-----VLKVSASDPDVGTNGQISYTLHGPDADKFHLEHRTGELFTLAVL 3070
Query: 178 PPSDDVEYELTVEAHD 193
+VE+ L V+A D
Sbjct: 3071 DRERNVEFNLVVKATD 3086
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 14/89 (15%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ L+RYSI G+ F++ +++SG + V + +DREE+ YSL + A
Sbjct: 3351 NNLLRYSIVSGDLLQQFSI------------DARSGDITVRTA-LDREEIPHYSLTVQAA 3397
Query: 85 DVKGIN-KAETHVTVDVLDENDNSPVFSQ 112
D + V V V D NDN PVFSQ
Sbjct: 3398 DEGSPPLSSAVLVAVTVTDVNDNPPVFSQ 3426
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 115/268 (42%), Gaps = 57/268 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+VRY I G+ F + + ++GV+ +T +DRE Y L + ATD+
Sbjct: 1059 VVRYRIHDGSGLGVFTI------------DEETGVIRMTEM-LDRETAPHYWLSVYATDL 1105
Query: 87 KGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
THV ++VLD NDN+P SQ +Y +S+ NV S+ VSAT
Sbjct: 1106 GTEPLITWTHVFIEVLDVNDNAPELSQPMYF-------ASVPENV---DTVESVIQVSAT 1155
Query: 146 DADGD---KVAYKLAVPSNLVV-IVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYA 201
D D K+++++ L I P+TG + TV A D + ++
Sbjct: 1156 DVDTSSDGKLSFQMLESHRLHFDIDPKTGVI--------------STVSALDREDKPEHS 1201
Query: 202 REPAQVWLQFN-SPVLQDEQ--LLQMIDRKSEAPHRIEKR--------RVTRAVRPTKRI 250
E V + N SP L ++Q++D P +EKR R + RI
Sbjct: 1202 IE---VIVSDNGSPALSSTATVVIQVLDANDNPPKFMEKRFDVKLPEQRHDGGKQEVCRI 1258
Query: 251 DFSETDGEMEGRIVFALEKETEREKFKI 278
+ D + + ++L++ + E+F+I
Sbjct: 1259 LAQDNDEGLNAAVTYSLQENMD-EQFEI 1285
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 76/176 (43%), Gaps = 29/176 (16%)
Query: 28 VRYSITQGNDNHTF---ALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
++Y+I G+D+ F A+K +R T S + LL +RE Y+L + A
Sbjct: 72 IKYNIVSGDDDGFFKAEAVKVGDFCFLRIKTRSSNSALL------NREVRDSYTLTVEAK 125
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD---LKSSLNSNVSHWKKFSSIGS 141
+ +A T V V VLD ND P+F Y + + LK SS+
Sbjct: 126 ESTFGFEAMTKVFVQVLDTNDLKPLFYPASYNVAIREDALLK-------------SSVTK 172
Query: 142 VSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
VSATDAD + Y ++ V+ P TG + L + Y+LTV A D
Sbjct: 173 VSATDADIGSNAEFYYSFTSRAHPFVVDPFTGTVSLIKRLNHTHAQRYDLTVLAED 228
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 119/285 (41%), Gaps = 55/285 (19%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFS 111
S + +SG + T + D E Y + ATD G K + V V+V+ DENDN P F+
Sbjct: 2845 SIDGESG-WITTLRETDCEVTRVYRFNVVATDHGGNAKLSSSVLVEVMVTDENDNPPKFT 2903
Query: 112 QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGE 171
++VYR S V + + I ++ TDAD +++ + L+
Sbjct: 2904 EEVYR----------GSVVENSTPYEPIVYMTTTDAD-------VSLENRLITC------ 2940
Query: 172 LLLTGDPPS-------DDVEYELTV-EAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQ 223
+ GDP D+ ++ L V E+ D ++ RYA +F +P+ D +L
Sbjct: 2941 YITAGDPLGQFAIVQVDEGQWGLIVKESLDREARDRYALRVTATDGKFEAPISVDVHVLD 3000
Query: 224 MIDRKSEAPHRIEKRRVTRAVRPTK----RIDFSETDGEMEGRIVFALEKETEREKFKIR 279
I+ S ++ V P+ ++ S+ D G+I + L + +KF +
Sbjct: 3001 -INDNSPLCEQLVYTEVVMENSPSSVFVLKVSASDPDVGTNGQISYTLHGP-DADKFHLE 3058
Query: 280 DENPWITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
R + + L E+ ++F + + +AT+GG
Sbjct: 3059 H-------------RTGELFTLAVLDRERNVEFNLVV--KATDGG 3088
>gi|195035917|ref|XP_001989418.1| GH11711 [Drosophila grimshawi]
gi|193905418|gb|EDW04285.1| GH11711 [Drosophila grimshawi]
Length = 5208
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 128/289 (44%), Gaps = 57/289 (19%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFAL-KNPTTHEIRNSTESKSG 60
EN+ +GT V + ++ + + R I GN+ H F L K P H +R
Sbjct: 417 ENASNGTVVAAVSVIDSDDGLNGETTTR--IISGNELHHFRLEKTPLFHIVR-------- 466
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+G +DREE+++Y+L + A D KG KA H+ ++V D ND+ PVF + Y +
Sbjct: 467 ----VNGVLDREEISKYNLTVVAID-KGTPERKAIAHLIINVNDVNDHEPVFEKSEYSAV 521
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL--VVIVPQTGELL 173
+ +L + S + S++ATD D +V Y++ + L I P TG L+
Sbjct: 522 LSELAPT----------GSFVASIAATDEDTGVNAQVYYEILTGNELKWFNIDPATG-LI 570
Query: 174 LTGDPPSDDVE--YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEA 231
+T P +V+ EL++ A D ++A +V + +D EA
Sbjct: 571 VTAGPLDREVQASVELSISARDGGPNPKFAYTQLKVTI---------------LDENDEA 615
Query: 232 PHRIEKR---RVTRAVRPTKRIDF---SETDGEMEGRIVFALEKETERE 274
PH + + ++ V P I ++ D G + F+L ER+
Sbjct: 616 PHFGQPQMNVSLSEDVAPPALIALLSATDNDQGTNGSVTFSLAASVERQ 664
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 106/259 (40%), Gaps = 39/259 (15%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+SG + V +G IDRE+ +Y L + A+D G +AET +T+ + D+NDN+P F Y F
Sbjct: 3002 RSGNITV-AGQIDREQQDEYILKVVASD--GAWRAETPITITIQDQNDNAPEFEHSFYSF 3058
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELL 173
+L+ H F +G + ATD D ++Y L PS + + P TGE+
Sbjct: 3059 NFPELQ--------HAVAF--VGQIIATDRDKQGPNSVISYSLQSPSPIFSVDPATGEIF 3108
Query: 174 LTGDPPSDDVEY--------ELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLL 222
+Y LT+ A D P Y + + N P + + L
Sbjct: 3109 SKTQIQYKHSQYISSPENMFALTILATDNGKPPLYTECLVNINIVDANNNPPKFEQMEYL 3168
Query: 223 QMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDEN 282
+ ++ R+ VR D D + I + L + F I +
Sbjct: 3169 SPLPEHAQGGQRV--------VRVHANDDL---DVGVNAEIDYILMESNRSAYFTINKHD 3217
Query: 283 PWITVDENGDVRVKKRWDF 301
WI++ DV R++F
Sbjct: 3218 GWISLIRPIDVPANSRFEF 3236
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 67/136 (49%), Gaps = 18/136 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE +Y + I +D G+ ET V + V D NDN PVF + VY F + +
Sbjct: 1916 LDRETKDKYEMRIRVSD--GVQYTETDVIIQVEDTNDNPPVFEESVYSFDIPE------- 1966
Query: 129 NVSHWKKFSSIGSVSATDAD---GDKVAYKLAV--PSNLVVIVPQTGELLLTGDPPSDDV 183
+ + +G + A DAD +++Y + +++ + PQTG L LT ++V
Sbjct: 1967 ---NAPRGYQVGEIVAKDADLAQNAQISYAVISDWANDVFSLNPQTGALTLTAKLDYEEV 2023
Query: 184 E-YELTVEAHDLQSPS 198
+ Y L V+A D PS
Sbjct: 2024 QHYILIVQAQDNGQPS 2039
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 66/145 (45%), Gaps = 19/145 (13%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN ++ F L T N + S + L T+G++DRE Y L I+A+D
Sbjct: 206 YEIVAGNLDNKFRLVTTT-----NPSGDTSYLHLETTGNLDRESRGSYQLNISASDGGSP 260
Query: 90 NK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ V V +LD NDN P+F D +LN V S + V A+D D
Sbjct: 261 PRLGFLQVNVTILDVNDNPPIFDHS-------DYSVTLNETV---MPGSPVLQVMASDND 310
Query: 149 -GD--KVAYKLAVPSNLVVIVPQTG 170
GD K+ Y LA + + P+TG
Sbjct: 311 LGDNSKLTYYLAETEHQFTVDPETG 335
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 45/222 (20%)
Query: 40 TFALKNPT--THEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK--AETH 95
++ LKN T EI +S E + T+ +DREE++ Y+LV+ A D +G+ +
Sbjct: 2884 SYRLKNDYDGTFEIADSGE------IYTTMRLDREEISDYALVVEAVD-QGVPQLTGTAS 2936
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKV 152
V + +LD+NDN P F+ ++Y V + N+ + + + SV+++D D
Sbjct: 2937 VLLHLLDKNDNPPKFT-RLYSLNVTE-----NAEIGSF-----VISVTSSDLDLGENANA 2985
Query: 153 AYKLA-VPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEAHD------------LQSP 197
Y + P I P++G + + G D D EY L V A D +Q
Sbjct: 2986 TYTFSDNPGKKFKIDPRSGNITVAGQIDREQQD-EYILKVVASDGAWRAETPITITIQDQ 3044
Query: 198 SRYAREPAQVWLQFNSPVLQDEQLL--QMI--DRKSEAPHRI 235
+ A E + FN P LQ Q+I DR + P+ +
Sbjct: 3045 NDNAPEFEHSFYSFNFPELQHAVAFVGQIIATDRDKQGPNSV 3086
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 30/120 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
V Y++ GN+ + F+L +S +G LL + +DRE + L + A D
Sbjct: 1333 VYYTLVAGNEGNLFSL------------DSATG-LLTLAHQLDRESQEIHRLTVVAKDAA 1379
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQ---------------KVYRFIVGDLKSSLNSNV 130
+K + ++T+ VLD+NDN+P F+Q ++ RF D +NS V
Sbjct: 1380 LKHPLSSSANITIIVLDDNDNAPEFTQSSSEISVLETSPSGTELMRFRASDADQGVNSQV 1439
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 51 IRNSTESKSGVL----LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDEND 105
I +++ K GV L +DREE Y+L ++ +D +++ V + V+DEND
Sbjct: 1103 IDGNSDRKFGVFPDGYLFVRATLDREERDYYALTVSCSDAGTPSRSSVVPVVIHVIDEND 1162
Query: 106 NSPVFSQKVYRF 117
N+P F+ + F
Sbjct: 1163 NAPQFTNSTFTF 1174
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 18/112 (16%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+E S SGT + + + + + + V +SIT GN TF + +S SG
Sbjct: 1414 LETSPSGTEL--MRFRASDADQGVNSQVVFSITAGNRRDTFHI------------DSVSG 1459
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHV--TVDVLDENDNSPVF 110
L + +D E++ Y+L ITA+D G T V V V+D+NDN P+F
Sbjct: 1460 SLYLHKS-LDYEDITNYTLNITASDC-GTPPLSTTVLYNVIVVDDNDNPPIF 1509
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 14/83 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
YSI GN F + +++SG + T+ +DRE++A Y+LVI A D
Sbjct: 3622 YSIINGNIKQNFKI------------DAESGEI-STASLLDREDIAHYNLVIGAIDTGLP 3668
Query: 90 NKAETH-VTVDVLDENDNSPVFS 111
+ T V +D+ D NDN P F+
Sbjct: 3669 PQTGTATVRIDLDDINDNGPTFT 3691
Score = 37.4 bits (85), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTV--DVLDENDNSPVFS 111
S ++G L +T+ +D EEV Y L++ A D G T +TV +VLD NDN+P+F
Sbjct: 2004 SLNPQTGALTLTA-KLDYEEVQHYILIVQAQD-NGQPSLTTTITVYCNVLDLNDNTPLFD 2061
Query: 112 QKVY 115
Y
Sbjct: 2062 PMSY 2065
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 63/148 (42%), Gaps = 21/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHV--TVDVLDENDNSPVFSQKVYRFIVG 120
+ T+ +DRE +A Y L + A D T V T+ V D NDN P F ++ +V
Sbjct: 2585 ITTATVLDRETIAIYHLTLMAQDSSITEPRATSVNLTIAVEDNNDNVPKFEASIFNIVV- 2643
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVP-SNLVVIVPQTGEL---- 172
N ++F + ATDAD V Y ++ + P TG +
Sbjct: 2644 -------PNNIRAEEF--VFGARATDADEGVNAMVRYNISGKDQQFFEVHPSTGVIRTKM 2694
Query: 173 -LLTGDPPSDDVEYELTVEAHDLQSPSR 199
L+ + P+ D+ Y + ++A D S R
Sbjct: 2695 ELMQKNKPNADIIYNINIQATDQGSMPR 2722
>gi|383861450|ref|XP_003706199.1| PREDICTED: protein dachsous-like [Megachile rotundata]
Length = 2659
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 115/244 (47%), Gaps = 36/244 (14%)
Query: 69 IDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE + +++L + ATD A V V VLD+NDN P F + Y F +L +L
Sbjct: 348 LDRESLDRHALTVLATDNGSPAATASASVLVTVLDDNDNDPRFEKDFYGF---ELLENLP 404
Query: 128 SNVSHWKKFSSIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE 184
S + +GSVSA+D D K A Y + ++ + P TGE + T +P + +
Sbjct: 405 SG-------TLVGSVSASDPDLGKNALLRYAVVQANSSFTVDPDTGE-ITTREPLDRETK 456
Query: 185 --YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRR 239
+EL +EA D +PSR AR P +V + NSP + D Q ++ + E P E R
Sbjct: 457 GVHELVLEARDQGTPSRAARVPLKVTVLDVNDNSPEIVDPQ-GDVVSVREEQPPGTEVAR 515
Query: 240 VTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
V RA+ +TD + + + K+ + + + + +P G +R K
Sbjct: 516 V-RAL---------DTDLGENASVTYTILKDRDSDGYNVFTIDPI-----TGMIRTKAVL 560
Query: 300 DFEE 303
D EE
Sbjct: 561 DHEE 564
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 17/146 (11%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
K G +V +D E ++YSL + A+D GI++A T + V V D NDN+P+F Q Y
Sbjct: 1670 KYGGKVVLRRRLDAETRSEYSLQVIASD--GIHEATTDLVVRVTDLNDNAPIFQQSAYIA 1727
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATD----ADGDKVAYKLAVPSNLVVIVPQTGELL 173
+ + + I +V+ATD D +V Y L + + P TG L
Sbjct: 1728 TLPE---------GGRGELQEILTVNATDDDLTEDNSRVRYYLQKATKGFSVHPVTGVLT 1778
Query: 174 L--TGDPPSDDVEYELTVEAHDLQSP 197
+ T P E EL + A D P
Sbjct: 1779 VNRTAIPRPLPREVELAIVAEDYGKP 1804
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 81/309 (26%), Positives = 120/309 (38%), Gaps = 85/309 (27%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN F L +S +G L ++ ++DRE VA+Y L I+A D K
Sbjct: 1053 IYYSIVGGNIGAKFIL------------DSVTGKLSMS--NLDRETVAKYVLTISAKD-K 1097
Query: 88 GIN--KAETHVTVDVLDENDNSPVFSQKVYR---------------------FIVGDLKS 124
G +A ++TV VLD NDN+P F Y F
Sbjct: 1098 GRPSLEARCNLTVIVLDVNDNAPTFVSNQYTESRPRGAVQNSEYPGFNLPNGFPYASPNF 1157
Query: 125 SLNSNVSHWKKF--------SSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQ-TGEL 172
N+ ++ + SSI SV ATD D K+ Y +A ++ + V TG +
Sbjct: 1158 PTNAYLNKYVATISEDVAPDSSIMSVKATDPDQGVNGKITYSIAEETSWLFRVDNLTGVI 1217
Query: 173 LLTGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWLQF-------NSPVLQDEQL 221
G S D E Y V A D +Y + V ++ N PV +
Sbjct: 1218 TTAG---SLDRERQNSYNFMVVATD---SGKYDAKTTSVPVEIRVSDVNDNGPVFE---- 1267
Query: 222 LQMIDRKSEAPHRIEKRRVTRAVRPTK---RIDFSETDGEMEGRIVFALEKETEREKFKI 278
E P R RV+ +P K R+ ++ D G I+++ E E+ KF+I
Sbjct: 1268 --------EHPFRA---RVSIGTQPEKNILRVVATDADEGANGEIIYSFLHEQEKPKFRI 1316
Query: 279 RDENPWITV 287
+T
Sbjct: 1317 HPSTGAVTA 1325
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 17/148 (11%)
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
G L+ G ++REE ++YS+ I A K ++ + V V+DENDNSP F
Sbjct: 970 GGLVTLRGPLNREETSRYSVPILARSSKLLDISTLEVL--VMDENDNSPEFRP------- 1020
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA--YKLAVPSNL---VVIVPQTGELLL 174
S V ++ S I +++ATD D K Y V N+ ++ TG+L +
Sbjct: 1021 ---GSCYTLAVPENQESSVIHTIAATDLDEGKNGEIYYSIVGGNIGAKFILDSVTGKLSM 1077
Query: 175 TGDPPSDDVEYELTVEAHDLQSPSRYAR 202
+ +Y LT+ A D PS AR
Sbjct: 1078 SNLDRETVAKYVLTISAKDKGRPSLEAR 1105
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 81/183 (44%), Gaps = 32/183 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P +RY + Q N N F + + ++G L + +D E ++ L+I A
Sbjct: 217 PSHPLRYVLGQ-NSNDLFGI------------DGRTGELYLAR-RLDYETQQRHGLLIRA 262
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G++ A ++V+V D NDN PVF + Y V + K S I V+
Sbjct: 263 LDGAGLS-ANLSLSVEVQDVNDNPPVFERNEYHVEVPE----------GAKLDSQILQVT 311
Query: 144 ATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSPS 198
A D D +++Y+L S+ I P TG + L D S D + LTV A D SP+
Sbjct: 312 AVDLDTGNNARLSYRLQ-GSSAFRISPNTGWIYLAQILDRESLD-RHALTVLATDNGSPA 369
Query: 199 RYA 201
A
Sbjct: 370 ATA 372
>gi|60279665|ref|NP_001012504.1| protocadherin 15b precursor [Danio rerio]
gi|57471176|gb|AAW50924.1| protocadherin 15b [Danio rerio]
Length = 1907
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 133/324 (41%), Gaps = 59/324 (18%)
Query: 8 TGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSG 67
TG L I K P V YSI +G+ N+ F + S++ LL+ +
Sbjct: 638 TGATLLNIQATDREKDP---VTYSIQKGDPNNVFEV-------------SQTSGLLLLAK 681
Query: 68 DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE Y+L +TA+D K + T V + V D NDN P F D LN
Sbjct: 682 TLDREITDXYTLTVTASDGKPDGTSTTTVNIAVTDVNDNDPEF----------DPLLPLN 731
Query: 128 SNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDP--PSDD 182
V + + +G V ATD D +V Y+L +L I P + T P +
Sbjct: 732 LTVQEEEANAFVGQVKATDLDLGINGQVRYRLVSYPDLFRISPNGS--IFTAMPLDREER 789
Query: 183 VEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSE--APHRIEKRRV 240
+Y+L V+A D A++P + + + VL +D S +P
Sbjct: 790 AQYDLIVQASD------GAKDPRRTTITLSITVLD-------VDDNSPVFSPPAYHATLP 836
Query: 241 TRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWD 300
+ T ++ S D +++ + + + + RE F + G+++V + D
Sbjct: 837 ENSPVGTVILNISALDPDLDANVTYRIRTKEARELFAVN--------SLTGELKVLRSLD 888
Query: 301 FEELGPEKTIDFWVTINNQATNGG 324
FE+L P T +V +A +GG
Sbjct: 889 FEKLLPNATTQTFVV---EALDGG 909
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 85/185 (45%), Gaps = 45/185 (24%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ GT V G+ IL A+ + Q + YSI +GN+ F + N +GV
Sbjct: 1055 ENAPVGT-VAGV-ILAAAIN----QTIVYSIIEGNEGGEFVVNN------------NTGV 1096
Query: 62 LLVTSGDIDREEVAQY-------SLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQK 113
+ T+ +D E + Y S+ + +++++ K+ T V +DV DEND+ PVF++
Sbjct: 1097 I-STAKPLDYESNSSYVLRVEADSMRVVSSNLRAPAKSNTAKVFIDVQDENDHPPVFTKP 1155
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVA--YKLAVPSNL-----VVI 165
Y L K F+S+ V A D D G+ A Y+L +P VI
Sbjct: 1156 FY----------LGGVAEDAKTFTSVLQVQALDKDTGNYSAMLYRLIIPPTTDGKDGFVI 1205
Query: 166 VPQTG 170
P TG
Sbjct: 1206 EPFTG 1210
>gi|363733446|ref|XP_420617.3| PREDICTED: protocadherin Fat 4 [Gallus gallus]
Length = 5019
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 54/267 (20%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+ YS+ +GN+ FA+ + T V LV G +D E A YSLVI A D
Sbjct: 1278 LIHYSVIKGNEEKQFAIDSSTGQ-----------VTLV--GKLDHEATASYSLVIQAVDS 1324
Query: 87 KGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVSA 144
++ + T +++DVLDENDNSP F KS+L+ +V + + SV+A
Sbjct: 1325 GAVSLSSTCTLSIDVLDENDNSPSFP-----------KSTLSVDVLENMRVGELVSSVTA 1373
Query: 145 TDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQ 195
TD+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1374 TDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQG 1430
Query: 196 SPSRYAREPAQVWLQ-FNS--PVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDF 252
P R + ++++ FN P + + I IE V +V +
Sbjct: 1431 RPPRSSTMSVVIYVRDFNDNPPNFPAGDIFKSI---------IENIPVGSSV---ISVTA 1478
Query: 253 SETDGEMEGRIVFALEKETER-EKFKI 278
+++D ++ G++ +A+ ++T R F+I
Sbjct: 1479 NDSDADINGQLTYAIIQQTPRGNHFRI 1505
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 92/190 (48%), Gaps = 29/190 (15%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+RY+I+ GN+ FA+ N TT L + +D E ++ L++TATD
Sbjct: 3157 LIRYNISSGNEAGNFAI-NTTTGT------------LTLAKPLDFELCQKHELIVTATDG 3203
Query: 87 KGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+++ VT++V+D NDNSP FS + Y + + + +++ ++A+
Sbjct: 3204 GWVSRTGFCSVTINVIDVNDNSPTFSPEDY----------FPNVLENAPSGTTVIRLNAS 3253
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRY 200
DAD +AY + + S+L VI P TG + G + + Y LT++A ++ R
Sbjct: 3254 DADSGPNAVIAYAIQSSDSDLFVIDPNTGTITTQGFLDYETKQSYHLTIKAFNVPDEERC 3313
Query: 201 AREPAQVWLQ 210
+ + L+
Sbjct: 3314 SFASVNIQLE 3323
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ V+YSI+ G+ + R K+G++ T +DREE Y L I A
Sbjct: 754 PNGTVKYSISAGDTS-------------RFQVHGKTGII-TTKIALDREEKTAYQLQIVA 799
Query: 84 TDVKGI-NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
TD + ++ + VT+ VLD DN PVFSQ +Y F+V
Sbjct: 800 TDGGHLQSQNQAIVTITVLDTQDNPPVFSQGMYGFVV 836
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 67 GDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYR 116
G++DRE V+ Y+L + ATD KG + T V V VLD NDN+P+F+QK+YR
Sbjct: 2144 GELDREAVSNYTLTVVATD-KGQPSLSSSTDVVVIVLDINDNNPLFAQKLYR 2194
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 73/174 (41%), Gaps = 29/174 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ N T +I T+ IDREE A Y L + A+
Sbjct: 860 ISYLITTGDQRGMFAI-NKVTGQI------------TTASIIDREEQAFYQLKVVAS--G 904
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V D NDNSP F V S+N V +WK +I A D
Sbjct: 905 GAVTGDTIVNITVKDLNDNSPHFIHAV---------ESVNV-VENWKAGHTIFQAKALDP 954
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSP 197
D V Y L P L I QTG + L G + Y++ + A D+ P
Sbjct: 955 DEGVNGMVLYSLKQNPKGLFSINEQTGAISLIGQLDINAGTYQVEILASDMGVP 1008
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 17/89 (19%)
Query: 26 QLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
QL+ Y I +GN ++F++ N T EIR+ +DRE++++Y+L I A+D
Sbjct: 2736 QLI-YEIIEGNTENSFSI-NRATGEIRSVRP------------LDREKLSRYTLTIKASD 2781
Query: 86 VKG--INKAETHVTVDVLDENDNSPVFSQ 112
KG + V ++VLDENDN+P FSQ
Sbjct: 2782 -KGTPLQSTTVKVIINVLDENDNAPRFSQ 2809
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1788 GDGSKIMQLTAMDADEGANALVTYTIISGADD-SFHV------------DPESGDLIATK 1834
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND+ P FS+ VY F
Sbjct: 1835 -RLDRERRSKYSLLVRADD--GLQSSDMRINITVSDVNDHIPKFSKPVYSF 1882
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 80/199 (40%), Gaps = 39/199 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSG----VLLVTSGDIDREEVAQYSLVITATD 85
Y I GN+ F L N T + SG + LV+ G +DRE Y L++ D
Sbjct: 159 YRIVSGNEEGRFRL---------NITLNPSGEGAFLHLVSQGGLDREATPSYQLLVQVED 209
Query: 86 VKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
KG + V V V D NDN PVFSQ +Y+ V + ++ V +S+ V+
Sbjct: 210 -KGEPRRRGYLQVNVTVQDINDNPPVFSQTLYQARVPE-----DAPVG-----ASVLQVA 258
Query: 144 ATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDV------------EYELTVE 190
A DAD G + + L DP S + +Y LTV+
Sbjct: 259 AADADEGTNADIRYRLEGGDGGGGEGASSLPFEVDPESGVIRIRERLDYELCQQYSLTVQ 318
Query: 191 AHDLQSPSRYAREPAQVWL 209
A D P+ R A + L
Sbjct: 319 ATDRGVPALSGRAEALIRL 337
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 28 VRYSITQGNDNHTFALKN----PTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
+RYSI GN+ F + TT + T +G VTSG +DRE +Q L I+A
Sbjct: 519 LRYSIVSGNELGWFHISEHSGLVTTAGPGSGTAGHAGGASVTSG-LDRETTSQVVLNISA 577
Query: 84 TDVKGINK--AETHVTVDVLDENDNSPVFSQ 112
D +G+ + + V +LD NDN P FSQ
Sbjct: 578 RD-QGVQPKFSYAQLVVTILDINDNKPRFSQ 607
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 66/155 (42%), Gaps = 41/155 (26%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ +GT + +LV SS + +T GN T NP+T +I
Sbjct: 2409 EDAPTGTDI----LLVNSSDADASRNAVIRLTGGNSQFTI---NPSTGQI---------- 2451
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKA---ETHVTVDVLDENDNSPVFSQKVYRFI 118
+TS +DRE Y+L++ A+D G +A T V V V D NDN P F Y
Sbjct: 2452 --ITSALLDRETRENYTLIVVASD-GGYPRALSSSTSVLVAVADVNDNPPKFQHHPY--- 2505
Query: 119 VGDLKSSLNSNVSHWKKFSSIGS----VSATDADG 149
V+H ++ GS V+ TDAD
Sbjct: 2506 -----------VTHVPSPTTSGSFVFAVTVTDADA 2529
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVF 110
L T +DREE A +SL + ATD+ + V V +LD NDNSPVF
Sbjct: 675 LSTISQLDREEQAHFSLQVLATDLGSPPLSSVARVNVSLLDVNDNSPVF 723
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 76/186 (40%), Gaps = 26/186 (13%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y++++ ++ F L NP T GV +T +D E Y L I A D
Sbjct: 1910 ITYTVSEDDEEGMFFL-NPVT-----------GVFNLTRA-LDYEAQQYYILTIRAEDGG 1956
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G A V ++LD NDN PVFS Y +SL N++ + A D
Sbjct: 1957 G-QFATIRVYFNILDINDNPPVFSMTSY-------STSLMENLAPGSAILNFSVTDADDG 2008
Query: 148 DGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE--YELTVEAHDLQ--SPSRYARE 203
++++ +A ++ +L P + + Y L V+ HD+ SRY
Sbjct: 2009 SNSQLSFSIASGDSMGHFGIDNSGVLSIQQPLDRESQSFYSLVVQVHDMAPLPASRYTST 2068
Query: 204 PAQVWL 209
AQV +
Sbjct: 2069 -AQVSI 2073
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 27/123 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
+ YSI +GN F + G L + S ++DRE +Y L++ A+D
Sbjct: 1065 IAYSIIEGNAGDAFGIF-------------PDGQLYIKS-ELDRELQERYILLVVASDRA 1110
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
V+ +N A ++TV + D NDN P+F+ Y F + +S S +G ++A
Sbjct: 1111 VEPLN-ATVNITVILEDVNDNRPLFNSTNYVFYFEEEQSG----------GSYVGKINAV 1159
Query: 146 DAD 148
D D
Sbjct: 1160 DKD 1162
>gi|170031843|ref|XP_001843793.1| cadherin [Culex quinquefasciatus]
gi|167871192|gb|EDS34575.1| cadherin [Culex quinquefasciatus]
Length = 2888
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 118/248 (47%), Gaps = 44/248 (17%)
Query: 69 IDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+DRE +Y++ + +D G+ A THV V VLD NDNSP+F +++Y F + +
Sbjct: 524 LDRELQERYNITVIVSD-NGVPTLTATTHVIVTVLDANDNSPIFPKQLYEFEIEE----- 577
Query: 127 NSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVV-IVPQTGELL----LTGDP 178
+ ++ S IG V+A+DAD V Y L +PSN I P +GE+ L +
Sbjct: 578 -----NMRRGSVIGQVTASDADTGINAVVRYSL-IPSNSSFQINPVSGEITTRDSLDRET 631
Query: 179 PSDDVEYELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQMIDRKSEAPHRI 235
SD Y+L VEA D +P R +R +V + N+P + D Q ++ + E P
Sbjct: 632 KSD---YDLVVEARDQGTPYRSSRISIKVKILDVNDNAPDIVDPQ-EDVVSVREEQPIGT 687
Query: 236 EKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRV 295
E RV RA+ + D I +++ K + + + + +P +G +R
Sbjct: 688 EVVRV-RAI---------DRDNGANASITYSILKGRDSDGYGMFSIDPI-----SGVLRT 732
Query: 296 KKRWDFEE 303
K D EE
Sbjct: 733 KVSLDHEE 740
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 13/109 (11%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D EE +Y L I A+D + A T +TV V D NDN PVF Q Y ++ D S N+
Sbjct: 1836 LDYEERHEYQLRILASDSAHV--ARTTLTVRVTDVNDNPPVFQQITYHAMLND-DSESNT 1892
Query: 129 NVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVIVPQTGELLL 174
N+ +I +V+ATD D + + Y ++ PS I TG+L +
Sbjct: 1893 NI-------AIIAVNATDVDSEGNAAIRYAISPPSPGFAIDELTGQLFV 1934
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 73/154 (47%), Gaps = 19/154 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQK 113
+SKSGV+ T+G+ DRE + Y ++ ATD N V V V+ D NDN PVF +
Sbjct: 1394 DSKSGVI-TTAGNFDRERQSIYHFMVVATDGGRYNARSQSVAVQVIIADVNDNKPVFDKY 1452
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA-VPSNLVV-IVPQ 168
++ +G L + ++ +SATDAD ++ Y L P+N I P
Sbjct: 1453 PFKEQIGAL----------VQPGQTLLHISATDADQGSNGEIVYSLNDNPNNSKFRINPS 1502
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYA 201
TG L T S++ + V A D +P + A
Sbjct: 1503 TGALSATQSLASENGRLLHIEVTARDKGNPPQVA 1536
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 15/100 (15%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSG-DIDREEVAQYSLVIT 82
P+ V Y I GND F++ + +G+L + + D DR ++ QY+LVI
Sbjct: 2127 PNSEVVYQIISGNDGGMFSI------------DLITGLLYINNNLDYDRGQI-QYNLVIR 2173
Query: 83 ATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
A D + K H +++ DENDN P F Y VG+
Sbjct: 2174 ACDSYVVPKCSIHPFIINLTDENDNEPQFPVPEYLEFVGE 2213
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 106/261 (40%), Gaps = 45/261 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI+ GN + F++ + +G +T+ +DRE A+Y L ITA D
Sbjct: 1274 ITYSISGGNIGNKFSI------------DINTGA--ITARPLDREVHARYVLQITAQDRG 1319
Query: 88 GINKAETH--VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ H +T+ V DENDN P F + Y V D + L + V +V A
Sbjct: 1320 SPTSQQGHCNITIRVEDENDNDPKFELQKYIATV-DEDAQLGTTVL---------TVKAV 1369
Query: 146 DAD---GDKVAYKLA-VPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRY 200
DAD ++ Y LA V L I ++G + G+ + Y V A D RY
Sbjct: 1370 DADIGINARIVYSLANVTEWLFDIDSKSGVITTAGNFDRERQSIYHFMVVATD---GGRY 1426
Query: 201 AREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTK---RIDFSETDG 257
V +Q ++ D D K K ++ V+P + I ++ D
Sbjct: 1427 NARSQSVAVQV---IIADVN-----DNKPVFDKYPFKEQIGALVQPGQTLLHISATDADQ 1478
Query: 258 EMEGRIVFALEKETEREKFKI 278
G IV++L KF+I
Sbjct: 1479 GSNGEIVYSLNDNPNNSKFRI 1499
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 122/322 (37%), Gaps = 55/322 (17%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ +GT + L + + + I GN++ F + P+ +
Sbjct: 1992 EDAPTGTVITNLIPKAIADQPDVSSSIAFEIIDGNEDGAFEISYPS-----------GAI 2040
Query: 62 LLVTSGDIDREEVAQYSLVITATD------VKGIN-KAETHVTVDVLDENDNSPVFSQKV 114
LLV +DRE++ Y L + T+ KG+N + VT+ V D NDN+P F
Sbjct: 2041 LLVKP--LDREKIDYYELRLVVTEPGARMVYKGMNMTSAIRVTITVEDANDNAPEFQPGP 2098
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-----GDKVAYKLAVPSN--LVVIVP 167
Y + + S K+ SI +SA DAD +V Y++ ++ + I
Sbjct: 2099 YEVSISE---------SAAIKY-SIAMISAVDADLVNSPNSEVVYQIISGNDGGMFSIDL 2148
Query: 168 QTGELLLTGDPPSD--DVEYELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLL 222
TG L + + D ++Y L + A D + + P + L N P + L
Sbjct: 2149 ITGLLYINNNLDYDRGQIQYNLVIRACDSYVVPKCSIHPFIINLTDENDNEPQFPVPEYL 2208
Query: 223 QMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDEN 282
+ + I R T + D M G + +++E I D
Sbjct: 2209 EFVGENEPVGISIFTARAT------------DMDRGMYGNVNYSIENALASGYSAIDDGW 2256
Query: 283 PWITVDE-NGDVRVKKRWDFEE 303
VD +G + +D+EE
Sbjct: 2257 KLFKVDSISGVINSNAVFDYEE 2278
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 62/124 (50%), Gaps = 15/124 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDN--SPVFSQK 113
+S SGV+ ++ D EE +YS + ATD G +K V V +L E+ + SP F+++
Sbjct: 2262 DSISGVI-NSNAVFDYEEKNRYSFTLKATDSGGKSKT---VKVKILIESRDEFSPQFTER 2317
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTG 170
YRF+ LK+ + H +G V+ATD D ++ Y+L + TG
Sbjct: 2318 TYRFV---LKT---PDTGHLPVGYVVGHVTATDRDRGPDGRIVYQLTTQHPYFKMNRTTG 2371
Query: 171 ELLL 174
+L+
Sbjct: 2372 AILI 2375
>gi|241148648|ref|XP_002405854.1| protocadherin-16, putative [Ixodes scapularis]
gi|215493769|gb|EEC03410.1| protocadherin-16, putative [Ixodes scapularis]
Length = 3222
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 16/115 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+ +G +DRE +Y L + A D G KAET +TV + D NDN+P F + YRF + +L
Sbjct: 1125 VTVAGPLDRELRDEYLLKVAAVD--GSWKAETPLTVSLQDVNDNAPRFERMAYRFRLPEL 1182
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELL 173
+S S +G V+ATDAD V+Y L PS+L + P TGE+L
Sbjct: 1183 QSG----------GSFVGRVAATDADKTGPNAAVSYSLRRPSDLFRVDPATGEVL 1227
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 115/251 (45%), Gaps = 45/251 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
VR+SI +G + +P T G LL+ +DRE AQ+ +TATD
Sbjct: 49 VRFSIAEGQSDAGHFRIDPQT-----------GALLLVEA-LDRELQAQHLFSVTATD-- 94
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHW---KKFSSIGSVSA 144
G+ E V+++V D NDN P+F + Y F DL W ++ + +G+VSA
Sbjct: 95 GLQSTEALVSIEVTDTNDNLPLFGEAAYSF---DL----------WEDTQRGAQVGAVSA 141
Query: 145 TDAD---GDKVAYKLAV--PSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
DAD +V+Y + +++ + PQTG LT + + Y L V+A D +PS
Sbjct: 142 VDADLGLNRQVSYSVLSDWANDVFSLNPQTGVFTLTSHLDYELYQHYVLVVQAQDSGTPS 201
Query: 199 RYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGE 258
+ A V++ VL + D S + +E V ++ R+ ++ D
Sbjct: 202 LSST--ATVYVN----VLDLNDNAPLFDPMSYSDEVLENVTVGSSL---LRVSATDLDSG 252
Query: 259 MEGRIVFALEK 269
GRIV+++ +
Sbjct: 253 DNGRIVYSIAE 263
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 13/89 (14%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
LL G +DRE+ A Y L++TA D +G + A + V +LDENDNSPVF + Y V
Sbjct: 381 LLRVRGLLDREQRASYELLVTARD-RGHPVRVASQRLRVRLLDENDNSPVFDPRQYSAAV 439
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
S NS+V +S+ VSATD D
Sbjct: 440 -----SENSSVG-----ASVLRVSATDQD 458
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 65/155 (41%), Gaps = 43/155 (27%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
VRYSI GN +FA+ E +G L + S +D E V ++ L ++A D
Sbjct: 1423 VRYSIESGNTGDSFAM------------EPHNGALTI-SAVLDYETVPEFRLNVSACDAA 1469
Query: 88 GINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKF--------SS 138
K A +TV V D ND P F N +H+ + ++
Sbjct: 1470 FHRKCASATLTVIVTDVNDCPPQF------------------NATHFDAYVAENEPPGTT 1511
Query: 139 IGSVSATDADGDK---VAYKLAVPSNLVVIVPQTG 170
+ +SA+DAD + V Y L S+ + PQ+G
Sbjct: 1512 VTQLSASDADSGRNRIVQYALVGGSSDFAVDPQSG 1546
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 110/291 (37%), Gaps = 60/291 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
VRYSI G+ NH F++ T GVL V +D E +Y L + A D
Sbjct: 465 VRYSIIAGDPNHDFSVGQDT------------GVLRVRR-SLDYERRTRYLLTLQAEDCA 511
Query: 88 GINKA----ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
G + VT+ V D NDN+P F Y V V + + +++
Sbjct: 512 GASSELRFDTATVTISVTDVNDNAPAFLDSPYELHV----------VENAATPVVLLTLA 561
Query: 144 ATDAD---GDKVAYKLA-VPSNLVVIVPQTGELLLTGDPPSDDV---EYELTVEAHDLQS 196
A DAD + Y+L + I +GEL L + P D Y LTV A D +
Sbjct: 562 AHDADQLPSGPIHYRLEDLGHGAFRINGTSGELSL--ERPLDRELRDRYLLTVLAVDSGN 619
Query: 197 PSRYAREPAQVWLQ---FNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFS 253
P + V++ N+P + + + A H P RI +
Sbjct: 620 PRQTGTGTVSVFVSDVNDNAPEFDRSRYVASLAENQPADH------------PVTRITAT 667
Query: 254 ETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEEL 304
+ D RI ++L E + +F + E+G VR + D EE
Sbjct: 668 DADVGRNARIRYSLHGE-QGSRFSVD--------AESGLVRARVPMDREEC 709
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 89/214 (41%), Gaps = 43/214 (20%)
Query: 12 GLPILVASS-----HKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G P+L S+ + HQ YSI +G+ N F + +S++G LL T+
Sbjct: 1717 GSPVLSVSAVDRDVRPNNHQFF-YSILEGDPNKVFGV------------DSQTG-LLHTA 1762
Query: 67 GDIDREEVAQYSLVITATDVKG----INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+DRE V Y+L + A D +G A VT+D D NDN P F DL
Sbjct: 1763 APLDRESVPSYTLTLAAID-RGSPPQTGTATVRVTLD--DVNDNGPEFEP-------ADL 1812
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKL--AVPSNLVVIVPQTGELLLTG 176
L + ++S+ +++A D D G AY L NL + QTG L T
Sbjct: 1813 ---LGYVLEDEPPYTSVLTLAARDRDLAPNGAPFAYSLVGGARRNLFELDRQTGVLRTTQ 1869
Query: 177 DPPSDDV-EYELTVEAHDLQSPSRYAREPAQVWL 209
+ +L VE D +P AR V L
Sbjct: 1870 RLDREATPSLQLLVEVQDSGNPPIRARHGLTVLL 1903
>gi|426247588|ref|XP_004017563.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23 [Ovis aries]
Length = 3324
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 142/329 (43%), Gaps = 77/329 (23%)
Query: 12 GLPILVASSHKH---PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G PI+V S+ H V Y +T GN+ F L E K+GVL +
Sbjct: 2633 GSPIIVVSASDRDVGSHAEVSYYLTSGNEKQHFCL------------EEKTGVLSLIK-P 2679
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D EE ++ L + A+D + + + V V+VLD+ND++P +F+ +L ++
Sbjct: 2680 LDYEETIKFILTVQASDEERKHFSFAIVFVNVLDDNDHAP-------QFMFPNLNCAVPE 2732
Query: 129 NVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELL----LTGDPPS 180
N+ FS+I SV+A D D GD + Y + P L +P L LTGD +
Sbjct: 2733 NL---PVFSTICSVNALDFDAGPYGD-MTYSIVSPCPLPQEMPHDHNLFLIDPLTGDISA 2788
Query: 181 -------DDVEYELTVEAHDLQSPSRYAREPAQVWLQFNS-----PVLQDEQLLQMIDRK 228
+D +Y L V+A D + VW+ P+ +Q + K
Sbjct: 2789 QQVLDYENDNKYCLIVQAKDKGG----STASLMVWVDVEGIDEFEPIFSQDQYFFNLPEK 2844
Query: 229 SEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVD 288
S H I R++ S+ D ++G I+++LE + P+ +V+
Sbjct: 2845 SHVRHLI------------GRVEASDADAGVDGVILYSLETPS-----------PFFSVN 2881
Query: 289 E-NGDVRVKKRWD--FEELGPEKTIDFWV 314
+ NG++ + + ++G E TI+ +
Sbjct: 2882 KTNGNIYLSRALPPVKSQVGKEDTIEMKI 2910
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 14/139 (10%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH 95
N TF+ + + + + +GV+++ +D EE ++Y L I +D+ +++ E
Sbjct: 2328 NPAFTFSFVKESNSGTKFAIDRNTGVVVLVE-TLDFEEASKYELQIQISDL--VHQTEGT 2384
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAY 154
VTV VLD NDN PVFSQ Y+ + +L + H + +V ATD + + + Y
Sbjct: 2385 VTVHVLDVNDNPPVFSQDSYQVTISELVP-----LGH-----PVLTVVATDVESSENITY 2434
Query: 155 KLAVPSNLVVIVPQTGELL 173
++ S + + P G +
Sbjct: 2435 RILSSSKMFSVDPANGTIF 2453
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 14/89 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I GN + FA+ SG L T +DREEV+ ++LVI +D+
Sbjct: 1815 VTYHIISGNTDEYFAINE------------MSGELSTTRA-LDREEVSNFTLVILCSDLG 1861
Query: 88 GINKAET-HVTVDVLDENDNSPVFSQKVY 115
++ T + V VLD ND+SP F ++ Y
Sbjct: 1862 SPPQSSTAQLQVRVLDVNDHSPSFPRQQY 1890
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 16/86 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
LV YSI GN + F + + SGVL + +D E + YSL++ ATD
Sbjct: 2228 LVEYSILSGNQGNVFQM------------DPLSGVL-TANVILDYEYTSAYSLIVQATD- 2273
Query: 87 KGINKAE--THVTVDVLDENDNSPVF 110
KGI + T + + V+D NDN+P F
Sbjct: 2274 KGIPRLSDTTVIKIQVIDINDNAPTF 2299
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
V +SI GN+N F L +S L T+ +D E +Q+ L + A D
Sbjct: 1606 VTFSILSGNENMAFMLD-------------ESSGFLTTASPLDYEIKSQHILTLLALDGG 1652
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVY 115
++ ++T +T+ VLD ND +PVF Q +Y
Sbjct: 1653 TPTLSSSQT-LTITVLDVNDEAPVFKQHLY 1681
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
V YSI GN + F ++ T I + K LV +DRE A + LV+ A D
Sbjct: 2537 VEYSIISGNSQNNFHVE---TSFIHSEYSYKQVGYLVLLHHLDREATASHELVLLAFDHG 2593
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVY 115
++ + T V+++VLD +DN P FS Y
Sbjct: 2594 CPPLSSSAT-VSIEVLDVDDNPPAFSSLEY 2622
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 69 IDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+DRE VA + L I A D + V V VLDENDN PVF ++ YR V
Sbjct: 284 LDREAVAAHELQIEAWDXGRPRRTGRLRVEVRVLDENDNPPVFEEREYRAAV 335
>gi|350581207|ref|XP_003480989.1| PREDICTED: protocadherin beta-6-like [Sus scrofa]
Length = 788
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 64/122 (52%), Gaps = 21/122 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DREE A+Y++ I+ +D+ + H +TV V D NDN+P FSQ Y V +
Sbjct: 402 LVTEGPLDREERAEYNITISVSDLGTPRRHTQHNLTVRVADVNDNAPAFSQPAYTLRVRE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H IG+V ATDAD ++ Y L PS+ LV I P TG+
Sbjct: 462 ----NNSPALH------IGTVRATDADAGANAQLTYSLLPPSDPHLPLASLVAINPDTGQ 511
Query: 172 LL 173
L
Sbjct: 512 LF 513
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 15/117 (12%)
Query: 45 NPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLD 102
NP H + RN + + LV +DREE + L +TA D ++ T + + VLD
Sbjct: 175 NPHFHVLTRNRKDGRKSPELVLDKALDREEQPELRLTLTALDGGSPPRSGTAEIQILVLD 234
Query: 103 ENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
NDN+P F+Q+ Y V + SSL S V +VSA D D +V+Y L
Sbjct: 235 INDNAPEFAQEFYEAQVPE-NSSLGSLVI---------TVSARDLDAGSFGEVSYAL 281
>gi|195032868|ref|XP_001988576.1| GH10500 [Drosophila grimshawi]
gi|193904576|gb|EDW03443.1| GH10500 [Drosophila grimshawi]
Length = 3594
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 23/215 (10%)
Query: 69 IDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE +Y L + ATD A V V VLD NDN P F ++ Y F + +
Sbjct: 1115 LDRESRDRYELTVLATDNGTPAAHARARVLVRVLDSNDNDPKFLRESYAFKIEE------ 1168
Query: 128 SNVSHWKKFSSIGSVSATDAD-GDKVAYKLA-VPSNLVVIV-PQTGELLLTGDPPSDDVE 184
+ ++ + +G VSATDAD G+ A + + +P+N V P TGE + T +P ++
Sbjct: 1169 ----NLRRGAVVGVVSATDADLGENAAIRYSLLPANSSFQVHPVTGE-ISTREPLDRELR 1223
Query: 185 --YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHR--IEK 237
Y+L VEA D +P+R AR P +V + N+P + D Q + R+ + P +
Sbjct: 1224 ELYDLVVEARDQGTPTRSARAPVRVTVTDVNDNAPEIADPQEDVVSVREEQPPGTEVVRI 1283
Query: 238 RRVTRAVRPTKRIDFSETDG-EMEGRIVFALEKET 271
R + R I++S G + +G +F+++ T
Sbjct: 1284 RAIDRDHGQNASINYSLLKGRDSDGHGLFSIDANT 1318
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 65/136 (47%), Gaps = 31/136 (22%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL---LVTSGDIDREEVAQYSLV 80
P+ RY+I GN N F L ++H R+ GVL L SG +DRE YSL+
Sbjct: 193 PYNTQRYNIVSGNVNDAFRL---SSHRERD------GVLYLDLQISGFLDRETTPAYSLL 243
Query: 81 ITATD-----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK 135
I A D ++G+ V + + D NDN P+F+Q Y V + N+ V
Sbjct: 244 IEALDGGTPPLRGL----MTVNITIQDVNDNQPIFNQSRYFATVPE-----NATVG---- 290
Query: 136 FSSIGSVSATDADGDK 151
SS+ V A+D D D+
Sbjct: 291 -SSVLQVYASDTDADE 305
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 112/269 (41%), Gaps = 38/269 (14%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG--INKAE 93
N ++L N T + + +SKSG L+ T G +DRE + YS ++ ATD +
Sbjct: 1990 NSRLVYSLANETQWQF--AIDSKSG-LITTVGKLDRELQSSYSFMVLATDCGRYEVRSGS 2046
Query: 94 THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GD 150
V ++VLD NDN P+F + Y G + + + + K V A DAD
Sbjct: 2047 VAVQINVLDINDNKPIFERYPYS---GQVPALIQPGQTLLK-------VQAHDADQGSNG 2096
Query: 151 KVAYKLAVPSNL--------VVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYA 201
+V Y L S L I P TG L T S+ +L V A D +P + +
Sbjct: 2097 EVLYALKADSLLGSAAIRSKFRINPNTGALSATQSLASETGNLLQLEVIARDKGNPPQSS 2156
Query: 202 REPAQVWLQFNSPV-----LQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETD 256
++ + SP Q+E + S A R+ + R+ +++ FS
Sbjct: 2157 VGLIELMVGEASPTAPQLHFQNETYRMKLRENSPAGTRLLQVGAVRSDGRRQKLSFSFGA 2216
Query: 257 GEMEGRIVFALEKETEREKFKIRDENPWI 285
G EG F L+ T +IR NP +
Sbjct: 2217 GNDEGS--FILDSSTG----EIRVANPAL 2239
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 84/186 (45%), Gaps = 25/186 (13%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
++ SS VRYSI G+ + F+++ P + IR + +D E
Sbjct: 837 VIATSSDTAQRSPVRYSIYSGDPDGYFSIE-PASGNIR------------IAHPLDHEAK 883
Query: 75 AQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV---GDLKSSLNSNVS 131
AQ L I AT + T V ++V D NDN+P F + R V +L + L + +
Sbjct: 884 AQVLLNIQATSGEPPVYGHTQVNIEVEDVNDNAPEFETSMVRISVPENAELGTPLFAAHA 943
Query: 132 HWKKFSSIGSVSATDADGDKV---AYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT 188
H K S G V+ + A+G+ K A S+L I ++G L+L S ++YE T
Sbjct: 944 HDKDSGSSGQVTYSLANGNATKSGKQKAAQASSLFAIDARSGHLVL-----SRHLDYE-T 997
Query: 189 VEAHDL 194
+ H L
Sbjct: 998 AQRHSL 1003
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 93/213 (43%), Gaps = 29/213 (13%)
Query: 12 GLPILVASSH---KHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G P+ A +H V YS+ GN + K + + +++SG LV S
Sbjct: 935 GTPLFAAHAHDKDSGSSGQVTYSLANGNATKSGKQKAAQASSLF-AIDARSG-HLVLSRH 992
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIV------- 119
+D E ++SL++TATD G+ A+ + VDV D NDN PVF + Y V
Sbjct: 993 LDYETAQRHSLIVTATDA-GLPPLSADLTILVDVQDVNDNPPVFERDEYAVNVSESRSIN 1051
Query: 120 --------GDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGE 171
DL + N+ +++ + + S + A V LA I P +G
Sbjct: 1052 AQIIQVNASDLDTGNNARITYRIVDAGADNASQSSASVSGVDTDLA---QHFGIFPNSGW 1108
Query: 172 LLLTG--DPPSDDVEYELTVEAHDLQSPSRYAR 202
+ L D S D YELTV A D +P+ +AR
Sbjct: 1109 IYLRAALDRESRD-RYELTVLATDNGTPAAHAR 1140
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 115/270 (42%), Gaps = 49/270 (18%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + YSI GN + F S ++++G L S +DRE+ ++Y+L + A
Sbjct: 1884 PNAEIVYSIIGGNLGNKF------------SIDARTGELSARS--LDREQHSRYTLQLQA 1929
Query: 84 TDVKG---INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG 140
+D +G ++ +++V V D+NDN P RF + +S+ N + SS+
Sbjct: 1930 SD-RGQPITHQGHCNISVFVEDQNDNEP-------RFELAKYMASVAENAAIG---SSVL 1978
Query: 141 SVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE--YELTVEAHDLQ 195
+ A+DAD ++ Y LA + + L+ T +++ Y V A D
Sbjct: 1979 RIKASDADLGVNSRLVYSLANETQWQFAIDSKSGLITTVGKLDRELQSSYSFMVLATDC- 2037
Query: 196 SPSRYAREPAQVWLQFNSPVLQDEQ-LLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSE 254
RY V +Q N + D + + + + P I+ + V+ +
Sbjct: 2038 --GRYEVRSGSVAVQINVLDINDNKPIFERYPYSGQVPALIQPGQTLLKVQA------HD 2089
Query: 255 TDGEMEGRIVFALEKETE------REKFKI 278
D G +++AL+ ++ R KF+I
Sbjct: 2090 ADQGSNGEVLYALKADSLLGSAAIRSKFRI 2119
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 83/200 (41%), Gaps = 40/200 (20%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
+SI GN+ F L PTT I +LV D +R ++ + L +T +V G
Sbjct: 2694 FSIANGNEEGAFELL-PTTKAI----------VLVKQLDRERNDLYKLQLQLTQGNVPGG 2742
Query: 90 --------NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFS-SIG 140
+ A V V VLD NDN+PVF D + + +S SI
Sbjct: 2743 TIYNSNSNSTAGITVFVSVLDANDNAPVF----------DANAKYEAEISELAPLRYSIA 2792
Query: 141 SVSATDADGD-----KVAYKLAVPSN--LVVIVPQTGELLLTG--DPPSDDVEYELTVEA 191
+ A DAD + +V Y ++ ++ + I +G L + D S YEL + A
Sbjct: 2793 QLIAVDADQENTPNSEVVYDISSGNDEHMFTIDLVSGVLFVNNRLDYDSGATSYELIIRA 2852
Query: 192 HDLQSP-SRYAREPAQVWLQ 210
D P S + +P Q+ L
Sbjct: 2853 CDSHQPRSLCSLQPFQLSLH 2872
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 64/122 (52%), Gaps = 13/122 (10%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
++ SG++ ++ D E+ +Y+L + A+D+ G A + V++ ++ +P F+++ Y
Sbjct: 2936 DATSGIV-SSAAVFDYEQRQRYNLQLRASDMGG-RSARVALRVEIESRDEFTPQFTERTY 2993
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGEL 172
RF+ L + + F +G V ATDAD +V Y+L+ P + + +G +
Sbjct: 2994 RFV-------LPATTALPLGF-IVGQVRATDADSGADGRVVYQLSAPHSHFKVNRSSGAV 3045
Query: 173 LL 174
L+
Sbjct: 3046 LI 3047
>gi|156399381|ref|XP_001638480.1| predicted protein [Nematostella vectensis]
gi|156225601|gb|EDO46417.1| predicted protein [Nematostella vectensis]
Length = 3766
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/324 (25%), Positives = 133/324 (41%), Gaps = 63/324 (19%)
Query: 17 VASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQ 76
VA + + ++Y I GN N FA+ NP+ SGV+L T ++D EE
Sbjct: 1523 VAVAKAATSEALKYEILSGNTNDMFAI-NPS-----------SGVILTTR-ELDYEEATG 1569
Query: 77 YSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKF 136
Y + I A D + A V ++V++ NDN P+F G+ ++ V+
Sbjct: 1570 YIMNIIARDTRD-RSASVQVIINVVNINDNEPMFP--------GETNGQIDRKVAGPFAP 1620
Query: 137 SSIGS-VSATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDL 194
I + ++A D D GD+V YK+++ + + + G+L+ D + T+EA D
Sbjct: 1621 GVIATRLTAVDKDIGDRVYYKISIEAENYFTIDERGQLICKNDLKGIASPFRFTIEARDG 1680
Query: 195 QSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRI---- 250
P + A V L F + R + P R+ TRA R+
Sbjct: 1681 GLPQKV--HTANVLLVF------------VNYRPKQQPVRVIVPETTRAXTVITRVPRIL 1726
Query: 251 -------DFSETDGEMEG--RIVFALEKETE--REKFKIRDENPWITVDENGDVRVKKRW 299
D + + G IV++ K EKF +V+ NG ++ +
Sbjct: 1727 ESLSVNSDVLKVSAQAPGGKSIVYSPVKANADIDEKF---------SVETNGQIKTASQL 1777
Query: 300 DFEELGP-EKTIDFWVTINNQATN 322
D+E+L P +KT V + TN
Sbjct: 1778 DYEQLSPGDKTFKLQVRAQEENTN 1801
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 33/164 (20%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+K G V I V +++ + L++YS GN F + + SG
Sbjct: 1220 ENTKVGQQV----ISVKATYGDSNALLQYSFVSGNLGDAFCIDS-------------SGQ 1262
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+ V +DRE + Y+L + G N+ T V V + D ND+SP F++ VY F
Sbjct: 1263 ITVAQ-PLDREVLPSYTLRVRV--ALGNNEDFTEVVVSLTDINDDSPTFTKSVYEFFA-- 1317
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNL 162
N ++S +SIG V+ATD D +++Y+ S++
Sbjct: 1318 -----NEDISSG---TSIGKVAATDRDSGSHGQISYRFLYASDI 1353
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 28/168 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI QG+ F ++ T L+ + +DRE+++ Y LVI A D
Sbjct: 507 VVYSIIQGSGLGVFQVQATTGD-------------LIVAAPLDREKMSFYDLVIKAEDKA 553
Query: 88 GINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
K+ +V V + D +D+ P F+Q +Y + KS N+ V+ V D
Sbjct: 554 TFPKSSNLYVMVKIQDVDDHFPQFTQPMY-YAKAPEKSPENTFVT---------VVKVVD 603
Query: 147 AD-GDKVAYKLAVPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEA 191
D G+ V+Y + S+ IVP +G +L TG D ++ YEL V A
Sbjct: 604 HDLGESVSYSITGASSF-KIVPTSGLILTTGPIDLTTEPSTYELVVTA 650
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHV--TVDVLDENDNSPVFS 111
S +S VLL+ +DRE Y L + T G T V V V D NDN+P+F+
Sbjct: 1048 SIDSSGRVLLLRQ--LDRERTKSYKLYVRGTYTGGSLTLATDVECLVTVTDVNDNTPLFT 1105
Query: 112 -QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTG 170
+V + V D + N+ ++ + S +A ++ + VPSN +
Sbjct: 1106 FDRVNKQFVVDNYAPANTIIATLRAVDSDEGANAQVT----MSIQGTVPSNAPFTIDTPS 1161
Query: 171 ELLLTGDPPSDDVEYELTVEAHDLQSPSRYA 201
+L T S ++Y++TV A D SP +Y+
Sbjct: 1162 NVLKTTTKLSTVIDYQITVRATDKGSPPQYS 1192
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 74/178 (41%), Gaps = 29/178 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I G + FA T I N T S +SG DRE + +++ I TD
Sbjct: 2509 YAIYNGTVSGNFAFDIAT---ITNVTTDMS-----SSGTFDRETMTTWTIGIAGTDSGRP 2560
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT--- 145
K+ T+V VDV D+NDN P D + ++ N S+ KF G ++ T
Sbjct: 2561 AKSNFTYVYVDVQDDNDNEPY-----------DGRMTIIVN-SYNGKFRG-GPIAKTYYR 2607
Query: 146 --DADGDKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSR 199
D DGD Y L N + TGE+ D P + ++V + +P R
Sbjct: 2608 DADYDGDVNTYTLQSQTGGNFFTVDTTTGEISAAKDIPVGEYSLVISVTEVNTGNPPR 2665
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 56/119 (47%), Gaps = 19/119 (15%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
+ IT GN + F + + N S G++ T +DRE + L ITA D G+
Sbjct: 2400 FDITGGNPDDLFEV-------VPNPDNSSLGIVR-TRLPLDRETTPIHHLEITAKDTGGL 2451
Query: 90 NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ HV + +LD NDN P F F VG +K ++N K+F + VSA D D
Sbjct: 2452 T-GKAHVWLTLLDVNDNGPWFQPP---FFVGKIKENVN-----VKQF--VTKVSANDPD 2499
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 52/121 (42%), Gaps = 9/121 (7%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E + GT V GL A K + RY I GN+ F E + K V
Sbjct: 143 EEAAQGTTVGGLEKCHAE-DKDRSGIDRYEIVSGNERGYFV------AETKTVGAQKFLV 195
Query: 62 LLVTSGDIDREEV-AQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
L T+ I R+ +L + A D G++ T + +D+ D N+N PVF + Y VG
Sbjct: 196 LKATNTRIVRDPARPSITLTVRANDGGGLH-GTTRIQIDIQDTNNNPPVFEKSEYTVTVG 254
Query: 121 D 121
+
Sbjct: 255 E 255
>gi|260830788|ref|XP_002610342.1| hypothetical protein BRAFLDRAFT_72456 [Branchiostoma floridae]
gi|229295707|gb|EEN66352.1| hypothetical protein BRAFLDRAFT_72456 [Branchiostoma floridae]
Length = 3154
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 126/296 (42%), Gaps = 42/296 (14%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E+ GT + GL L ++ YSIT GN++ FA+ T H
Sbjct: 2175 EDEYGGTSILGLVAL----DDDEGNVLTYSITAGNEHRDFAVGASTGH------------ 2218
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
++ + +D E Y+L +TA D G N + T + V +LD NDN PVFSQ VYR V
Sbjct: 2219 -VIVAKSLDHETRPAYTLTVTAFDQDGRNGSTT-LLVKILDVNDNPPVFSQDVYRVEV-- 2274
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG----DKVAYKLAVPS--NLVVIVPQTGELLLT 175
+ + + +G V ATDAD KV Y + + N I ++GE+
Sbjct: 2275 --------MEDIQPGALVGQVEATDADALPQNKKVLYHILSGNVYNTFRIDTESGEVFTQ 2326
Query: 176 GDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHR 234
+ + Y+LT++A + S+ Q+ Q + + + D + A
Sbjct: 2327 AAVDRETLSLYQLTIQATNPSGDSQSVNGTTQITAQMFITIADVNDIAPVFDEEEYARPI 2386
Query: 235 IEKRRVTRAVRPTKRIDFSETDGEM--EGRIVFALEKETEREKFKIRDENPWITVD 288
+E + ++ + DG++ R+ +++ + FKI +++ + V+
Sbjct: 2387 LENEPIGTSI-----LYVHAEDGDLGNNSRLSYSIAEGNVDNAFKINEKSGLVMVN 2437
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 17/96 (17%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ + YSIT GN F + N T EI +G +DRE + QY+L +TA
Sbjct: 1482 NAFITYSITSGNIGQVFRI-NGTNGEI------------YVNGLLDREVIPQYTLTVTAR 1528
Query: 85 D----VKGINKAETHVTVDVLDENDNSPVFSQKVYR 116
D + + T V + V+DEND P F+Q +YR
Sbjct: 1529 DNPQNPTHVRRDTTQVYITVIDENDQRPRFTQPLYR 1564
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 84/176 (47%), Gaps = 25/176 (14%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN S T + L + P+ ++ Y+IT G+ H F + STE G
Sbjct: 512 ENEASQTPI--LRVRATDEDSPPYNILVYNITSGDSLHNFTI----------STEDGYGY 559
Query: 62 LLVTSGDIDREEVAQ--YSLVITATDVKGIN---KAETHVTVDVLDENDNSPVFSQKVYR 116
+ TS +D E + + L++TATD G N + T V ++V D+NDN PVF+Q+ Y
Sbjct: 560 IY-TSAPLDYEMMTGNLFELMVTATD--GGNHTLNSTTRVVIEVEDQNDNGPVFNQQEYN 616
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGEL 172
V + +++ + + F+S +S + D V Y ++ S I P+ GE+
Sbjct: 617 VSV---REDISAGDTVLRVFASDADMSE-ELGQDSVIYSMSGSSRF-RINPRDGEI 667
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 19/166 (11%)
Query: 43 LKNPTTHE--IRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDV 100
L +P T+E +R + + S L+ T +IDREE AQY + + +TD GI V++ +
Sbjct: 945 LFDPNTNEEVLRRFSINGSTGLISTIEEIDREEAAQYDITVISTD-GGIETDSATVSIVI 1003
Query: 101 LDENDNSP---VFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLA 157
LDENDN P +FSQ D+ + + + + + DAD +V Y +
Sbjct: 1004 LDENDNFPKFNIFSQT-------DVSVTEGPLTPNGSDIARVIARDPDDADNGRVEYTIE 1056
Query: 158 VPSNLVVI---VPQTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
++L ++G+ ++ P D EY+L V A D SP
Sbjct: 1057 EGNDLEYFKIEKTESGDGIIRNLHPLDREEQEEYKLRVVACDQGSP 1102
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
Query: 2 ENSKSGTGVK-GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
ENS++GT V IL + + V YSI G D F + +S G
Sbjct: 1569 ENSQAGTAVDMSEDILAVDADATTNAEVHYSIF-GKDARFFRI------------DSVKG 1615
Query: 61 VLLVTSGDI-DREEVAQ-YSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYR 116
L V G + DRE + S + A D G+N++ V +++LD+NDNSP+F ++R
Sbjct: 1616 ELFVRDGSLLDRETIGNDLSFTVMAADPGGLNES-AGVYLEILDQNDNSPIFISTLFR 1672
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 39/195 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSG-DIDREEVAQYSLVITATD- 85
+ Y+I G++N F + G L V G ++DRE A Y++ + A D
Sbjct: 1378 IDYTIDDGDENDEFYIS------------LLDGDLKVKQGLELDRERTAFYNITLRAQDR 1425
Query: 86 ----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+KG V+++VLD NDN P+F Y + S N+ V + +
Sbjct: 1426 GRPPLKGF----MTVSIEVLDINDNDPIFQDLPYY-----CRVSENAPVD-----TLVFK 1471
Query: 142 VSATDAD-GDKVAYKLAVPSN----LVVIVPQTGELLLTGDPPSDDV-EYELTVEAHD-L 194
VSA D D G+ ++ S + I GE+ + G + + +Y LTV A D
Sbjct: 1472 VSANDTDEGNNAFITYSITSGNIGQVFRINGTNGEIYVNGLLDREVIPQYTLTVTARDNP 1531
Query: 195 QSPSRYAREPAQVWL 209
Q+P+ R+ QV++
Sbjct: 1532 QNPTHVRRDTTQVYI 1546
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 128/303 (42%), Gaps = 46/303 (15%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ + Y I GN++ F + + SG + DRE Y++ +
Sbjct: 1159 NAFLSYYIISGNEDSMFRM------------DRLSGDITTRPNSPDRETKDFYNMTVLVE 1206
Query: 85 DVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D +A T V + +LDENDN+PVF Y + + + + S I ++
Sbjct: 1207 DEGSPQLQAYTTVYISILDENDNAPVFEFPTYSYTLREGEGSAG---------IYIVDIN 1257
Query: 144 ATDAD---GDKVAYKLAVPS--NLVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQS 196
ATD D KV + +A + N I P TG++ D + EY L V A D Q+
Sbjct: 1258 ATDIDQGLNGKVVFNIASGNDGNEFDIEPDTGKIRTVNELDYENSAGEYRLAVIASD-QA 1316
Query: 197 PSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETD 256
P R+ + + + + D ++ R+ P R+ + + V F E
Sbjct: 1317 PDVNDRQTSTTTVTISVNDIND--VVPHFLREHVGPVRMAEGLLGSFVGSFPA--FDEDS 1372
Query: 257 GEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEELGPEKTIDFWVTI 316
G+ G+I + ++ E ++F +I++ +GD++VK+ EL E+T + +T+
Sbjct: 1373 GDF-GKIDYTIDDGDENDEF-------YISL-LDGDLKVKQGL---ELDRERTAFYNITL 1420
Query: 317 NNQ 319
Q
Sbjct: 1421 RAQ 1423
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 79/168 (47%), Gaps = 29/168 (17%)
Query: 69 IDREEVAQYSLVITATD-VKGI--NKAE--THVTVDVLDENDNSPVFSQKVYRFIVGDLK 123
+DREE + L +TATD G+ N E V V VLDENDN+P S + F V +
Sbjct: 2008 LDREEQTDFLLSVTATDNTDGLPSNSRENSVQVVVTVLDENDNTPEPSTSKFDFRVPE-- 2065
Query: 124 SSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAV----PSNLVV--IVPQTGEL---- 172
N + +G++ A+D D GD + ++ P+++++ I TG +
Sbjct: 2066 ---NQPAGEY-----VGTILASDRDEGDNGRLQFSILKQEPNHVMLFDIENTTGVISSAR 2117
Query: 173 LLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQ 217
LL + + ELT++ DL SP R + A + + NSP Q
Sbjct: 2118 LLDRETMGYNGIVELTIQISDLGSPPRMSSTKAVIKILDSNDNSPYFQ 2165
>gi|297484498|ref|XP_002694357.1| PREDICTED: protocadherin-23 [Bos taurus]
gi|296478818|tpg|DAA20933.1| TPA: dachsous 2-like [Bos taurus]
Length = 3360
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 141/329 (42%), Gaps = 77/329 (23%)
Query: 12 GLPILVASSHKH---PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G PI+V S+ H V Y +T GN+ F L E K+GVL +
Sbjct: 2669 GSPIIVVSASDRDVGSHAEVSYYLTSGNEKQHFCL------------EEKTGVLSLIK-P 2715
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D EE ++ L + A+D + + + V V+VLD+ND++P +F+ +L ++
Sbjct: 2716 LDYEETIKFILTVQASDEERKHFSFAIVFVNVLDDNDHAP-------QFMFPNLNCAVPE 2768
Query: 129 NVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELL----LTGDPPS 180
N+ FS+I SV+A D D GD + Y + P L +P LTGD +
Sbjct: 2769 NL---PVFSTICSVNALDFDAGPYGD-MTYSIVSPCPLPHEMPHDHNFFLIDPLTGDISA 2824
Query: 181 -------DDVEYELTVEAHDLQSPSRYAREPAQVWLQFNS-----PVLQDEQLLQMIDRK 228
+D +Y L V+A D + VW+ P+ +Q + K
Sbjct: 2825 QQVLDYENDNKYCLIVQAKDKAD----STASVVVWVDVEGIDEFEPIFTQDQYFFSLPEK 2880
Query: 229 SEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVD 288
S H I R++ S+ D ++G I+++LE + P+ +V+
Sbjct: 2881 SHVRHLI------------GRVEASDADAGVDGVILYSLETPS-----------PFFSVN 2917
Query: 289 E-NGDVRVKKRWDF--EELGPEKTIDFWV 314
+ NG++ + + ++G E TI+ +
Sbjct: 2918 KTNGNIYLSRALPLIKSQVGKEDTIEMKI 2946
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 14/139 (10%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH 95
N TF+ + + + + +GV+++ +D EE +Y L I +D+ +++ E
Sbjct: 2364 NPAFTFSFVKESNSGTKFAIDRNTGVVVLVE-TLDFEEATKYELQIQISDL--VHQTEGT 2420
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAY 154
VTV VLD NDN PVFSQ Y+ + +L + H + ++ ATD + + + Y
Sbjct: 2421 VTVHVLDVNDNPPVFSQDSYQVTISELVP-----LGH-----PVLTIVATDVESSENITY 2470
Query: 155 KLAVPSNLVVIVPQTGELL 173
++ S + + P G +
Sbjct: 2471 RILSSSKMFSVDPTNGTIF 2489
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 14/90 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I GN + FA+ N + E L T+ +DREEV+ ++LVI +D+
Sbjct: 1851 VTYHIIDGNTDEYFAV-NEMSGE------------LSTTRALDREEVSNFTLVILCSDLG 1897
Query: 88 GINKAET-HVTVDVLDENDNSPVFSQKVYR 116
++ T + V VLD+ND+SP F + Y+
Sbjct: 1898 SPPQSSTAQLQVRVLDDNDHSPSFPRLQYQ 1927
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 16/86 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
LV YSI GN + F + + SGVL S +D E + YSL++ A D
Sbjct: 2264 LVEYSILSGNQGNVFQM------------DPLSGVL-TASAILDYEYTSTYSLIVQAMD- 2309
Query: 87 KGINKAE--THVTVDVLDENDNSPVF 110
KG+ + T + + V D NDN+P+F
Sbjct: 2310 KGMPRLSDTTVIKIQVTDINDNAPIF 2335
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
V +SI GN+N F L +S L T+ +D E +Q+ L + A D
Sbjct: 1642 VTFSILSGNENMAFMLD-------------ESSGFLTTASPLDYEIKSQHILTLLALDGG 1688
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVY 115
++ ++T +T+ VLD ND +PVF Q +Y
Sbjct: 1689 TPTLSSSQT-LTITVLDVNDEAPVFKQHLY 1717
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
V YSI GN + F ++ T I + K LV +DRE A + LV+ A D
Sbjct: 2573 VEYSIISGNSQNNFHVE---TSFIHSEYSYKQVGYLVLLHHLDREATASHELVLLAFDHG 2629
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVY 115
++ + T V+++VLD +DN P FS Y
Sbjct: 2630 CPPLSSSAT-VSIEVLDVDDNPPAFSSLEY 2658
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 49/110 (44%), Gaps = 15/110 (13%)
Query: 69 IDREEVAQYSLVITA--TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E Y+ + A + K A T VTV VLDENDNSP F V V + S +
Sbjct: 1136 LDYESTQMYNFRVFAWIPEDKLSQNASTSVTVHVLDENDNSPTFWHDVLFLKVQE--SPM 1193
Query: 127 NSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELL 173
V IG ++A D D K ++Y L + P TGEL+
Sbjct: 1194 PQGV--------IGKITAIDRDSGKNGQLSYFLLSDEKFFKMNPNTGELI 1235
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 63 LVTSGDIDRE-EVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+ S D DRE + Y L++ A D G++ A+ V V++ D NDN PVF+ Y
Sbjct: 712 ICVSQDTDRERDPVTYDLLVKAKDGGGLS-AQAFVRVELEDVNDNEPVFNPLTY------ 764
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVP--SNLVVIVPQTGELLLT 175
+ S + + + +V ATD D K VAY+L + S+ I TG + LT
Sbjct: 765 ----VTSLSGQAQLGTEVINVLATDRDSGKYGTVAYELVLGDLSSFFTIDSTTGIIYLT 819
>gi|194674457|ref|XP_001789138.1| PREDICTED: protocadherin-23 [Bos taurus]
Length = 3360
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 141/329 (42%), Gaps = 77/329 (23%)
Query: 12 GLPILVASSHKH---PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G PI+V S+ H V Y +T GN+ F L E K+GVL +
Sbjct: 2669 GSPIIVVSASDRDVGSHAEVSYYLTSGNEKQHFCL------------EEKTGVLSLIK-P 2715
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D EE ++ L + A+D + + + V V+VLD+ND++P +F+ +L ++
Sbjct: 2716 LDYEETIKFILTVQASDEERKHFSFAIVFVNVLDDNDHAP-------QFMFPNLNCAVPE 2768
Query: 129 NVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELL----LTGDPPS 180
N+ FS+I SV+A D D GD + Y + P L +P LTGD +
Sbjct: 2769 NL---PVFSTICSVNALDFDAGPYGD-MTYSIVSPCPLPHEMPHDHNFFLIDPLTGDISA 2824
Query: 181 -------DDVEYELTVEAHDLQSPSRYAREPAQVWLQFNS-----PVLQDEQLLQMIDRK 228
+D +Y L V+A D + VW+ P+ +Q + K
Sbjct: 2825 QQVLDYENDNKYCLIVQAKDKAD----STASVVVWVDVEGIDEFEPIFTQDQYFFSLPEK 2880
Query: 229 SEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVD 288
S H I R++ S+ D ++G I+++LE + P+ +V+
Sbjct: 2881 SHVRHLI------------GRVEASDADAGVDGVILYSLETPS-----------PFFSVN 2917
Query: 289 E-NGDVRVKKRWDF--EELGPEKTIDFWV 314
+ NG++ + + ++G E TI+ +
Sbjct: 2918 KTNGNIYLSRALPLIKSQVGKEDTIEMKI 2946
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 68/139 (48%), Gaps = 14/139 (10%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH 95
N TF+ + + + + +GV+++ +D EE +Y L I +D+ +++ E
Sbjct: 2364 NPAFTFSFVKESNSGTKFAIDRNTGVVVLVE-TLDFEEATKYELQIQISDL--VHQTEGT 2420
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAY 154
VTV VLD NDN PVFSQ Y+ + +L + H + ++ ATD + + + Y
Sbjct: 2421 VTVHVLDVNDNPPVFSQDSYQVTISELVP-----LGH-----PVLTIVATDVESSENITY 2470
Query: 155 KLAVPSNLVVIVPQTGELL 173
++ S + + P G +
Sbjct: 2471 RILSSSKMFSVDPTNGTIF 2489
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 14/90 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I GN + FA+ N + E L T+ +DREEV+ ++LVI +D+
Sbjct: 1851 VTYHIIDGNTDEYFAV-NEMSGE------------LSTTRALDREEVSNFTLVILCSDLG 1897
Query: 88 GINKAET-HVTVDVLDENDNSPVFSQKVYR 116
++ T + V VLD+ND+SP F + Y+
Sbjct: 1898 SPPQSSTAQLQVRVLDDNDHSPSFPRLQYQ 1927
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 16/86 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
LV YSI GN + F + + SGVL S +D E + YSL++ A D
Sbjct: 2264 LVEYSILSGNQGNVFQM------------DPLSGVL-TASAILDYEYTSTYSLIVQAMD- 2309
Query: 87 KGINKAE--THVTVDVLDENDNSPVF 110
KG+ + T + + V D NDN+P+F
Sbjct: 2310 KGMPRLSDTTVIKIQVTDINDNAPIF 2335
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
V +SI GN+N F L +S L T+ +D E +Q+ L + A D
Sbjct: 1642 VTFSILSGNENMAFMLD-------------ESSGFLTTASPLDYEIKSQHILTLLALDGG 1688
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVY 115
++ ++T +T+ VLD ND +PVF Q +Y
Sbjct: 1689 TPTLSSSQT-LTITVLDVNDEAPVFKQHLY 1717
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
V YSI GN + F ++ T I + K LV +DRE A + LV+ A D
Sbjct: 2573 VEYSIISGNSQNNFHVE---TSFIHSEYSYKQVGYLVLLHHLDREATASHELVLLAFDHG 2629
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVY 115
++ + T V+++VLD +DN P FS Y
Sbjct: 2630 CPPLSSSAT-VSIEVLDVDDNPPAFSSLEY 2658
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 49/110 (44%), Gaps = 15/110 (13%)
Query: 69 IDREEVAQYSLVITA--TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E Y+ + A + K A T VTV VLDENDNSP F V V + S +
Sbjct: 1136 LDYESTQMYNFRVFAWIPEDKLSQNASTSVTVHVLDENDNSPTFWHDVLFLKVQE--SPM 1193
Query: 127 NSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELL 173
V IG ++A D D K ++Y L + P TGEL+
Sbjct: 1194 PQGV--------IGKITAIDRDSGKNGQLSYFLLSDEKFFKMNPNTGELI 1235
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 63 LVTSGDIDRE-EVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+ S D DRE + Y L++ A D G++ A+ V V++ D NDN PVF+ Y
Sbjct: 712 ICVSQDTDRERDPVTYDLLVKAKDGGGLS-AQAFVRVELEDVNDNEPVFNPLTY------ 764
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVP--SNLVVIVPQTGELLLT 175
+ S + + + +V ATD D K VAY+L + S+ I TG + LT
Sbjct: 765 ----VTSLSGQAQLGTEVINVLATDRDSGKYGTVAYELVLGDLSSFFTIDSTTGIIYLT 819
>gi|326918941|ref|XP_003205743.1| PREDICTED: protocadherin Fat 4-like [Meleagris gallopavo]
Length = 5008
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 120/266 (45%), Gaps = 52/266 (19%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+ YS+ +GN+ FA+ + T V LV G +D E A YSLVI A D
Sbjct: 1283 LIHYSVIKGNEEKQFAIDSSTGQ-----------VTLV--GKLDHEATASYSLVIQAVDS 1329
Query: 87 KGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + T +++DVLDENDNSP F + + V + + + + SV+AT
Sbjct: 1330 GAVPLSSTCTLSIDVLDENDNSPSFPKSILSVDV----------LENMRVGELVSSVTAT 1379
Query: 146 DAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQS 196
D+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1380 DSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQGR 1436
Query: 197 PSRYAREPAQVWLQ-FNS--PVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFS 253
P R + ++++ FN P + + I IE V +V + +
Sbjct: 1437 PPRSSTMSVVIYVRDFNDNPPNFPAGDIFKSI---------IENIPVGSSV---ISVTAN 1484
Query: 254 ETDGEMEGRIVFALEKETER-EKFKI 278
++D ++ G++ +A+ ++T R F+I
Sbjct: 1485 DSDADINGQLTYAIIQQTPRGNHFRI 1510
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 29/190 (15%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+RY+I+ GN+ FA+ N TT L + +D E ++ L++TATD
Sbjct: 3147 LIRYNISSGNEAGNFAI-NTTTGT------------LTLAKPLDFELCQKHDLIVTATDG 3193
Query: 87 KGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+++ VT++V+D NDNSP FS + Y V + + +++ ++A+
Sbjct: 3194 GWVSRTGFCSVTINVIDVNDNSPAFSPEDYFPKV----------LENAPSGTTVIRLNAS 3243
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRY 200
DAD +AY + + S+L VI P TG + G + + Y LT++A ++ R
Sbjct: 3244 DADSGPNAVIAYAIQSSDSDLFVIDPNTGTITTQGFLDYETKQSYHLTIKAFNVPDEERC 3303
Query: 201 AREPAQVWLQ 210
+ + L+
Sbjct: 3304 SFASVNIQLE 3313
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 15/97 (15%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ V+YSI+ G+ + R SK+G++ T +DREE Y L + A
Sbjct: 759 PNGTVKYSISAGDTS-------------RFQVHSKTGII-TTKIALDREERTAYQLQVVA 804
Query: 84 TDVKGI-NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
TD + ++ + VT+ VLD DN PVF+Q +Y F+V
Sbjct: 805 TDGGHLQSQNQAIVTITVLDTQDNPPVFNQGMYGFVV 841
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%), Gaps = 3/52 (5%)
Query: 67 GDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYR 116
G++DRE V+ Y+L + ATD KG + T V V VLD NDN+P+F+QK+YR
Sbjct: 2149 GELDREAVSNYTLTVVATD-KGQPSLSSSTDVIVIVLDINDNNPIFAQKLYR 2199
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 17/89 (19%)
Query: 26 QLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
QL+ Y I +GN ++F + N T EIR+ +DRE+++QY+L I A+D
Sbjct: 2726 QLI-YEIIEGNTENSFNI-NRATGEIRSIRP------------LDREKLSQYTLTIKASD 2771
Query: 86 VKG--INKAETHVTVDVLDENDNSPVFSQ 112
KG + V ++VLDENDN+P FSQ
Sbjct: 2772 -KGTPLQSTTVKVIINVLDENDNAPRFSQ 2799
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 71/174 (40%), Gaps = 29/174 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ T + T+ IDREE A Y L + A+
Sbjct: 865 ISYLITTGDQRGMFAINRVTGQ-------------ITTASIIDREEQAFYQLKVVAS--G 909
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V D NDNSP F V S+N V +WK +I A D
Sbjct: 910 GAVTGDTIVNITVKDLNDNSPHFIHAV---------ESVNV-VENWKAGHTIFQAKALDP 959
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSP 197
D V Y L P L I QTG + L G + Y++ + A D+ P
Sbjct: 960 DEGVNGMVLYSLKQNPKGLFSINEQTGAISLIGQLDINAGTYQVEILASDMGVP 1013
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1793 GDGSKIMQLTAMDADEGANALVTYTIISGADD-SFHV------------DPESGDLIATK 1839
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND+ P FS+ VY F
Sbjct: 1840 -RLDRERRSKYSLLVRADD--GLQSSDMRINITVSDVNDHIPKFSKPVYSF 1887
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 80/199 (40%), Gaps = 39/199 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSG----VLLVTSGDIDREEVAQYSLVITATD 85
Y I GN+ F L N T + SG + LV+ G +DRE Y L++ D
Sbjct: 164 YRIVSGNEEGRFRL---------NITLNPSGEGAFLHLVSQGGLDREATPSYQLLVQVED 214
Query: 86 VKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
KG + V V V D NDN PVFSQ +Y+ V + ++ V +S+ V+
Sbjct: 215 -KGEPRRRGYLQVNVTVQDINDNPPVFSQTLYQARVPE-----DAPVG-----ASVLQVA 263
Query: 144 ATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDV------------EYELTVE 190
A DAD G + + L DP S + +Y LTV+
Sbjct: 264 AADADEGTNADIRYRLEGGDGGGGEGASSLPFEVDPESGVIRIREHLDYELCQQYSLTVQ 323
Query: 191 AHDLQSPSRYAREPAQVWL 209
A D P+ R A + L
Sbjct: 324 ATDRGVPALSGRAEALIRL 342
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 66/154 (42%), Gaps = 41/154 (26%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ +GT + +LV SS + +T GN T NP+T +I
Sbjct: 2399 EDAPTGTDI----LLVNSSDADASRNAVIRLTGGNSQFTI---NPSTGQI---------- 2441
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKA---ETHVTVDVLDENDNSPVFSQKVYRFI 118
+TS +DRE Y+LV+ A+D G KA T V V V D NDN P F Y
Sbjct: 2442 --ITSALLDRETRENYTLVVVASD-GGYPKALSSSTSVLVAVADVNDNPPKFQHHPY--- 2495
Query: 119 VGDLKSSLNSNVSHWKKFSSIGS----VSATDAD 148
V+H ++ GS V+ TDAD
Sbjct: 2496 -----------VTHVPSPTTSGSFVFAVTVTDAD 2518
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 82/183 (44%), Gaps = 35/183 (19%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG + V SG +DRE+ + SL + A + ++G + E V + VLD ND PVF+
Sbjct: 3373 DGRSGQIYV-SGPLDREKEERISLRVLAKNSGSIRGADIDEVTVNITVLDAND-PPVFTL 3430
Query: 113 KVYRFIVGD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSN 161
Y + + S+ +S+ V W +FS IGS D A+
Sbjct: 3431 GTYNIQISEGVPPGTHVTFVSAFDSDSVPSWSRFSYFIGS------GNDNSAFS------ 3478
Query: 162 LVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQ 217
I PQTG++ +T + + + Y L++ A D +PS V L+ N P L
Sbjct: 3479 ---INPQTGQVTVTAELDREALPVYNLSLLAIDSGTPSATGSASLLVTLEDINDNGPTLS 3535
Query: 218 DEQ 220
Q
Sbjct: 3536 TRQ 3538
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVF 110
L T +DREE A +SL + ATD+ + V V +LD NDNSPVF
Sbjct: 680 LSTISQLDREEQAHFSLQVLATDLGSPPLSSVARVNVSLLDVNDNSPVF 728
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 27/123 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
+ YSI +GN F + G L + S ++DRE +Y L++ A+D
Sbjct: 1070 IAYSIIEGNAGDAFGIF-------------PDGQLYIKS-ELDRELQERYVLLVVASDRA 1115
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
V+ +N A ++TV + D NDN P+F+ Y F + +S S +G ++A
Sbjct: 1116 VEPLN-ATVNITVILEDVNDNRPLFNSTNYVFYFEEEQSG----------GSYVGKINAV 1164
Query: 146 DAD 148
D D
Sbjct: 1165 DKD 1167
>gi|6688786|emb|CAB65271.1| mouse fat 1 cadherin [Mus musculus]
Length = 4587
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 124/294 (42%), Gaps = 44/294 (14%)
Query: 16 LVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVA 75
V H V Y I GN F + NP + I +T +D E +
Sbjct: 1687 FVGMVSAHSQSSVMYEIRDGNMGDAFNI-NPHSGSI------------ITQRALDFETLP 1733
Query: 76 QYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK 135
YSL + T++ G++ T V V V DENDN PVF+Q Y + + +S+NS V +
Sbjct: 1734 MYSLTVQGTNMAGLS-TNTTVVVHVRDENDNPPVFTQAEYSGFISE-SASVNSVVLTDRN 1791
Query: 136 FSSIGSVSATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELT 188
+ + ATDAD + + Y++ PS N I P TG + +L+ D + + T
Sbjct: 1792 VPLV--IRATDADRESNALLVYQIVEPSVHNYFAIDPTTGAIRTVLSLD-YEETHAFHFT 1848
Query: 189 VEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTK 248
V+ HD+ +P +A A V + +ID P + + PT
Sbjct: 1849 VQVHDMGTPRLFAEYAANV-------------TVHVIDINDCPPVFSKSLYEVSLLLPTY 1895
Query: 249 R------IDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
R ++ ++ D + ++++++ + EKF + + I + +R +
Sbjct: 1896 RGVNVITVNATDADSKAFSQVMYSITEGNIGEKFSMDHKTGTIAIQNTTQLRSR 1949
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 32/199 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + Y+I GN++ F++ +SK+G + +
Sbjct: 3248 GTEVLQVYAASRDIEANAEITYAIISGNEHGKFSI------------DSKTGAIFIIES- 3294
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L + ATD ++ T V ++V D NDNSPVFSQ Y +V + ++L
Sbjct: 3295 LDYESSHEYYLTVEATDGGTPSLSDVAT-VNINVTDINDNSPVFSQDTYTTVVSE-DAAL 3352
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
V ++ A DADG + Y + + I P GE+ +T +
Sbjct: 3353 EQPVI---------TIMADDADGPSNSHIHYSIIEGNQGSPFTIDPVRGEVKVTKPLDRE 3403
Query: 182 DVE-YELTVEAHDLQSPSR 199
+ Y LTV+A D +P R
Sbjct: 3404 TISGYTLTVQAADNGNPPR 3422
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 15/91 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1175 LTYRITSGNPQGFFSI------------HPKTGLITTTSRKLDREQQDEHILEVTVTD-N 1221
Query: 88 GINKAET--HVTVDVLDENDNSPVFSQKVYR 116
G+ T V V +LDENDN P F QK Y+
Sbjct: 1222 GVPPRSTIARVIVKILDENDNRPQFLQKFYK 1252
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 88/201 (43%), Gaps = 28/201 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P + P +RY I G+ + F + + +R T+
Sbjct: 46 ENSAAKTYV-GHPRKMGIYILDPSWEIRYKIVSGDSENLFKAEEYVLGDFCFLRIRTKGG 104
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A V V VLD ND P+FS Y
Sbjct: 105 NTAIL------NREVRDHYTLIVKAVEKATDAEARAKVRVQVLDTNDLRPLFSPTSYSV- 157
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 158 ------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKDRTDVFAIHPTSGVVVLT 208
Query: 176 GDPPSDDVE---YELTVEAHD 193
G D +E YEL + A D
Sbjct: 209 GR--LDFLETQLYELEILAAD 227
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI +GN F + +P E++ + +DRE ++ Y+L + A D
Sbjct: 3372 IHYSIIEGNQGSPFTI-DPVRGEVK------------VTKPLDRETISGYTLTVQAADNG 3418
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+P+FS+ Y I+
Sbjct: 3419 NPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVII 3451
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 14/87 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GND+ F + + ++GVL V S +DRE + +Y+L IT D+
Sbjct: 755 YAISGGNDDSCFTI------------DMETGVLKVLS-PLDREVMDKYTLNITVYDLGIP 801
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVY 115
KA + V VLD NDN+P F Q+ Y
Sbjct: 802 QKAAWRLLDVTVLDANDNAPEFLQESY 828
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 113/279 (40%), Gaps = 44/279 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N +S + +DRE+ Y L +TATD
Sbjct: 2956 VSYFITGGDALGQFAVEN-----------VQSDWRVYVKKPLDREQKDSYLLTVTATD-- 3002
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD--LKSSLNSNVSHWKKFSSIGSVSAT 145
G ++ V V VLD NDNSPV + Y + + L L + VSAT
Sbjct: 3003 GTFSSKARVEVKVLDANDNSPVCEKTSYSDTIPEDALPGKL------------VMQVSAT 3050
Query: 146 DAD---GDKVAYKL-AVPSNLVVIVPQTGEL-LLTGDPPSDDVEYELTVEAHDLQSPSRY 200
DAD ++ Y L + + P TGEL L + Y L V+A D S
Sbjct: 3051 DADIRSNAEITYTLFGSGAEKFKLNPDTGELRTLALLDREEQAVYNLLVKATDGGGRSCQ 3110
Query: 201 AREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEME 260
A + VL E + + P+ I T P R+ ++ D +
Sbjct: 3111 A-----------AIVLTLEDVNDNAPEFTAEPYTITVFENTEPGTPLTRVQATDADTGLN 3159
Query: 261 GRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
+I ++L E+ +F I + + I ++++ D ++ +
Sbjct: 3160 RKISYSL-VESADGQFSINERSGIIQLEKHLDRELQAVY 3197
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 39/252 (15%)
Query: 50 EIRNSTESKSGV----------LLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVT 97
EIR S SG+ ++ TS +DRE + Y L + ATD +G+ + V
Sbjct: 1069 EIRYSIRDGSGIGVFRIDEETGVIETSDRLDRESTSHYWLTVYATD-QGVVPLSSFIEVY 1127
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAY 154
++V D NDN+P S+ VY + + + K S+ + A D D DK+ Y
Sbjct: 1128 IEVEDVNDNAPQTSEPVYYPEI----------MENSPKDVSVVQIEAFDPDSSSNDKLTY 1177
Query: 155 KLAV--PSNLVVIVPQTGELLLTGDP----PSDDVEYELTVEAHDLQSPSRYAREPAQVW 208
++ P I P+TG + T D+ E+TV + + S AR ++
Sbjct: 1178 RITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEVTVTDNGVPPRSTIARVIVKIL 1237
Query: 209 LQF-NSP-VLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFA 266
+ N P LQ +++ +R+ R +R P R+ ++ D + ++
Sbjct: 1238 DENDNRPQFLQKFYKIRLPEREKADGDRSASKR-----EPLYRVIAADKDEGPNAELSYS 1292
Query: 267 LEKETEREKFKI 278
+E+ E +F I
Sbjct: 1293 IEEGNEHGRFSI 1304
>gi|114602953|ref|XP_001168406.1| PREDICTED: protocadherin Fat 2 [Pan troglodytes]
Length = 4349
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G PIL+ S+ V Y + +GN + F++ S SG L+ T ++D
Sbjct: 1676 GSPILLVSAMSSSE--VTYELREGNKDGVFSMN------------SYSG-LISTQKNLDH 1720
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E+++ Y L I +++ G + V VD++DENDN+P+F + + VG + +
Sbjct: 1721 EKISSYQLKIRGSNMAGA-FTDVMVVVDIIDENDNAPMFFKSTF---VGQISEAAPLYSM 1776
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EY 185
K ++ + A+D+D + + YK+ P L I P G L + D + + +
Sbjct: 1777 IMDKNNNPFVIHASDSDKEANSLLVYKILEPEALKFFKIDPSMGTLTIVSDMDYESMPSF 1836
Query: 186 ELTVEAHDLQSPSRYAREPAQVWLQF----NSPVLQDEQLLQM 224
+ V HD SP +A PAQV + +SP EQ+ ++
Sbjct: 1837 QFCVYVHDQGSPILFAPRPAQVIIHVRDVNDSPPRFSEQIYEV 1879
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLV 80
P VRY I G+ + F + +R T+S + LL +RE Y+L+
Sbjct: 65 PQWAVRYRIISGDVANVFKTEEYVVGNFCFLRIRTKSSNTALL------NREVRDSYTLI 118
Query: 81 ITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD---LKSSLNSNVSHWKKFS 137
I AT+ +A T V V +LD+ND P+FS YR + + LK S
Sbjct: 119 IQATEKTLELEALTRVVVHILDQNDLKPLFSPPSYRVTISEDMPLK-------------S 165
Query: 138 SIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTG 176
I V+ATDAD + A Y S + I P +G + + G
Sbjct: 166 PICKVTATDADLGQNAEFYYAFNTRSEMFAIHPTSGVVTVAG 207
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 79/178 (44%), Gaps = 32/178 (17%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS+ G V L L A + Q+ Y IT+G+ F + E R S+
Sbjct: 2916 VENSEPGELVATLKTLDADISEQNRQVTCY-ITEGDPLGQFGISQ-VGDEWRISSRKT-- 2971
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+DRE A+Y L +TA+D G +A V + VLD NDNSP SQ +Y V
Sbjct: 2972 --------LDREHTAKYLLRVTASD--GKFQASVTVEIFVLDVNDNSPQCSQLLYTGKV- 3020
Query: 121 DLKSSLNSNVSHWKKFSS--IGSVSATDADGD---KVAYKLAVP-SNLVVIVPQTGEL 172
H F I VSATD D D ++ Y L P ++ + P TGEL
Sbjct: 3021 -----------HEDVFPGHFILKVSATDLDTDTNAQITYSLHGPGAHEFKLDPHTGEL 3067
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 28/169 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN+ F + E ++G LL + +D E Y L +T D+
Sbjct: 752 YVIADGNEEGCFDI------------ELETG-LLTVAAPLDYEATNFYILNVTVYDLGTP 798
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K+ +TV+V D NDN+P F Y+ + + ++ V ++I ++ DAD
Sbjct: 799 QKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE-----DTEVG-----TTIAELTTKDAD 848
Query: 149 GD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSD-DVEYELTVEAHD 193
+ +V Y L P+ + P TGEL++TG + + Y L VEA D
Sbjct: 849 SEDNGRVRYTLLSPTEKFSLHPLTGELVVTGHLDRESEPRYILKVEARD 897
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 33/205 (16%)
Query: 26 QLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
++V +T N + LK P++ + +++G L+ T+ +D + A Y L I +
Sbjct: 380 RVVMVRVTPAFPNLQYVLK-PSSENVGFKLNARTG-LITTTKLMDFHDRAHYQLHIRTSP 437
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+A T V +D++D N+++P+F++ Y +L+ N+ +S+ +V+AT
Sbjct: 438 ----GQASTVVVIDIVDCNNHAPLFNRSSY-------DGTLDENI---PPGTSVLAVTAT 483
Query: 146 DADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT-------VEAHDLQ 195
D D + V Y +A P L + ++ T P ++YEL V A D
Sbjct: 484 DRDHGENGYVIYSIAGPKALPFSIDPYLGIISTSKP----MDYELMKRIYTFRVRASDWG 539
Query: 196 SPSRYAREPAQVWLQFNSPVLQDEQ 220
SP R +E ++LQ + L D Q
Sbjct: 540 SPFRREKE-VSIFLQLRN--LNDNQ 561
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 31/123 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ ++IT GN + F + +P T LL T+ +DRE ++ L +T D
Sbjct: 1172 LTFNITSGN-HMGFFMIHPVTG------------LLSTAQQLDRENKDEHILEVTVLDNG 1218
Query: 88 GIN-KAETHVTVDVLDENDNSPVFSQK-----------------VYRFIVGDLKSSLNSN 129
+ K+ + V V +LD NDN PVFS K VYR + DL LN
Sbjct: 1219 EPSLKSTSRVVVGILDVNDNPPVFSHKLFNVRLPERLSPVSPGPVYRLVASDLDEGLNGR 1278
Query: 130 VSH 132
V++
Sbjct: 1279 VTY 1281
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
+T+ K+GVL VT G +D E ++ + ATD + +E V V V D NDN P FSQ
Sbjct: 2217 TTDFKTGVLTVT-GPLDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQL 2275
Query: 114 VY 115
VY
Sbjct: 2276 VY 2277
>gi|195118208|ref|XP_002003632.1| GI18019 [Drosophila mojavensis]
gi|193914207|gb|EDW13074.1| GI18019 [Drosophila mojavensis]
Length = 2980
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 23/215 (10%)
Query: 69 IDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE +Y L + ATD A V V VLD NDN P F ++ Y F + +
Sbjct: 485 LDRESRDRYELTVLATDNGTPAAHARARVLVRVLDANDNDPKFQRESYEFRIEE------ 538
Query: 128 SNVSHWKKFSSIGSVSATDAD-GDKVAYKLA-VPSNLVVIV-PQTGELLLTGDPPSDDVE 184
+ ++ + +G VSA+DAD G+ A + + +P+N V P TGE + T +P ++
Sbjct: 539 ----NLRRGAVVGVVSASDADLGENAAIRYSLLPANSSFQVHPVTGE-ISTREPLDRELR 593
Query: 185 --YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHR--IEK 237
Y+L VEA D +P+R AR P +V + N+P + D Q + R+ + P +
Sbjct: 594 ELYDLMVEARDQGTPTRSARAPVRVHVTDVNDNAPEIADPQEDVVSVREEQPPGTEVVRI 653
Query: 238 RRVTRAVRPTKRIDFSETDG-EMEGRIVFALEKET 271
R + R I++S G + +G +F+++ T
Sbjct: 654 RAIDRDHGQNASINYSLLKGRDSDGHGLFSIDANT 688
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 97/216 (44%), Gaps = 33/216 (15%)
Query: 12 GLPILVASSH---KHPHQLVRYSITQGNDNHTFALKN---PTTHEIRNSTESKSGVLLVT 65
G P+ A +H V YSIT GN N T + PT + + +++SG LV
Sbjct: 303 GTPLFAAHAHDKDSGSSGQVTYSIT-GNANATQPGRGKAQPTGAALF-AIDARSG-HLVL 359
Query: 66 SGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIV---- 119
S +D E ++SL++TATD G+ A+ + VDV D NDN PVF + Y V
Sbjct: 360 SRHLDYETAQRHSLIVTATD-GGLPPLSADLTILVDVQDVNDNPPVFERDEYAVNVSESR 418
Query: 120 -----------GDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQ 168
DL + N+ +++ + + S + A+ LA I P
Sbjct: 419 PINAQIIQVNASDLDTGNNARITYRIVDAGADNASQSLANAGGPDADLA---QHFGIFPN 475
Query: 169 TGELLLTG--DPPSDDVEYELTVEAHDLQSPSRYAR 202
+G + L D S D YELTV A D +P+ +AR
Sbjct: 476 SGWIYLRAALDRESRD-RYELTVLATDNGTPAAHAR 510
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG--INKAE 93
N ++L N T + + + SG L+ T G +DRE A YS ++ ATD + +
Sbjct: 1367 NSKLVYSLANETQWQF--AIDGTSG-LITTVGKLDRELQASYSFMVLATDCGRYEVRSSS 1423
Query: 94 THVTVDVLDENDNSPVFSQKVY 115
V ++VLD NDN PVF + Y
Sbjct: 1424 VAVQINVLDVNDNKPVFERYPY 1445
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 64/116 (55%), Gaps = 13/116 (11%)
Query: 63 LVTSGDI-DREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+V+SG + D E+ +Y+L + A+D+ G A V V++ ++ +P F+++ YRF
Sbjct: 2323 IVSSGAVFDYEQRQRYNLQLRASDMGG-RSARVAVRVEIESRDEFTPQFTERTYRF---- 2377
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGELLL 174
+L ++ + F +G V+ATDAD +V Y+L+ P + + +G +L+
Sbjct: 2378 ---ALPASTALPLGF-VVGQVTATDADSGADGRVVYQLSAPHSHFKVNRSSGAVLI 2429
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 117/272 (43%), Gaps = 61/272 (22%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN + F S ++++G L ++ +DRE+ A+Y+L + A+D +
Sbjct: 1265 IVYSIIGGNLGNKF------------SIDARTGEL--SARPLDREQHARYTLQLQASD-R 1309
Query: 88 G---INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS--- 141
G ++ +++V V D+NDN P F Q Y V+ + ++IGS
Sbjct: 1310 GQPITHQGHCNISVFVEDQNDNEPHFDQPKY--------------VASVPENAAIGSSVL 1355
Query: 142 -VSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE--YELTVEAHDLQ 195
++A DAD K+ Y LA + + T L+ T +++ Y V A D
Sbjct: 1356 RINARDADLGVNSKLVYSLANETQWQFAIDGTSGLITTVGKLDRELQASYSFMVLATDC- 1414
Query: 196 SPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTK---RIDF 252
RY + V +Q N +L + D K +V ++P + ++
Sbjct: 1415 --GRYEVRSSSVAVQIN--------VLDVNDNKPVFERYPYTGQVPALIQPGQTLLKVQA 1464
Query: 253 SETDGEMEGRIVFALEKETE------REKFKI 278
+ D G +++AL+ ++ R KF+I
Sbjct: 1465 HDADQGANGDVLYALKADSTLTGAAMRSKFRI 1496
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 82/188 (43%), Gaps = 27/188 (14%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
++ SS VRYSI G+ + F+++ P + IR + +D E
Sbjct: 205 VIATSSDTAQRSPVRYSIYSGDPDGYFSIE-PASGNIR------------IARPLDHEAK 251
Query: 75 AQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV---GDLKSSLNSNVS 131
AQ L I AT T V ++V D NDN+P F + R V +L + L + +
Sbjct: 252 AQVLLNIQATSGDPPVYGHTQVNIEVEDVNDNAPEFETSMVRISVPENAELGTPLFAAHA 311
Query: 132 HWKKFSSIGSVSAT---DADGDKVAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVEYE 186
H K S G V+ + +A+ + A P+ L I ++G L+L S ++YE
Sbjct: 312 HDKDSGSSGQVTYSITGNANATQPGRGKAQPTGAALFAIDARSGHLVL-----SRHLDYE 366
Query: 187 LTVEAHDL 194
T + H L
Sbjct: 367 -TAQRHSL 373
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 21/133 (15%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V Y+I +G K+ T E+R S SG + + +G++D E Y + ATD
Sbjct: 1 MVNYTIGEG-------FKHLTEFEVR----SASGEICI-AGELDYERRNSYEFPVLATDR 48
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
G++ + + + D NDN PVF + Y + + + S S I +V ATD
Sbjct: 49 GGLSTTAM-IKLQLTDVNDNRPVFYPREYNVSLRESGPAQGSGSSM-----PIVAVVATD 102
Query: 147 ADG---DKVAYKL 156
D +V+Y++
Sbjct: 103 PDAGSFGQVSYRI 115
>gi|157951641|ref|NP_001074755.2| FAT tumor suppressor homolog 1 precursor [Mus musculus]
Length = 4590
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 124/294 (42%), Gaps = 44/294 (14%)
Query: 16 LVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVA 75
V H V Y I GN F + NP + I +T +D E +
Sbjct: 1687 FVGMVSAHSQSSVMYEIRDGNMGDAFNI-NPHSGSI------------ITQRALDFETLP 1733
Query: 76 QYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK 135
YSL + T++ G++ T V V V DENDN PVF+Q Y + + +S+NS V +
Sbjct: 1734 MYSLTVQGTNMAGLS-TNTTVVVHVRDENDNPPVFTQAEYSGFISE-SASVNSVVLTDRN 1791
Query: 136 FSSIGSVSATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELT 188
+ + ATDAD + + Y++ PS N I P TG + +L+ D + + T
Sbjct: 1792 VPLV--IRATDADRESNALLVYQIVEPSVHNYFAIDPTTGAIRTVLSLD-YEETHAFHFT 1848
Query: 189 VEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTK 248
V+ HD+ +P +A A V + +ID P + + PT
Sbjct: 1849 VQVHDMGTPRLFAEYAANV-------------TVHVIDINDCPPVFSKSLYEVSLLLPTY 1895
Query: 249 R------IDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
R ++ ++ D + ++++++ + EKF + + I + +R +
Sbjct: 1896 RGVNVITVNATDADSKAFSQVMYSITEGNIGEKFSMDHKTGTIAIQNTTQLRSR 1949
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 32/199 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + Y+I GN++ F++ +SK+G + +
Sbjct: 3248 GTEVLQVYAASRDIEANAEITYAIISGNEHGKFSI------------DSKTGAIFIIES- 3294
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L + ATD ++ T V ++V D NDNSPVFSQ Y +V + ++L
Sbjct: 3295 LDYESSHEYYLTVEATDGGTPSLSDVAT-VNINVTDINDNSPVFSQDTYTTVVSE-DAAL 3352
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
V ++ A DADG + Y + + I P GE+ +T +
Sbjct: 3353 EQPVI---------TIMADDADGPSNSHIHYSIIEGNQGSPFTIDPVRGEVKVTKPLDRE 3403
Query: 182 DVE-YELTVEAHDLQSPSR 199
+ Y LTV+A D +P R
Sbjct: 3404 TISGYTLTVQAADNGNPPR 3422
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 15/90 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y IT GN F++ K+G++ TS +DRE+ ++ L +T TD G+
Sbjct: 1177 YRITSGNPQGFFSI------------HPKTGLITTTSRKLDREQQDEHILEVTVTD-NGV 1223
Query: 90 NKAET--HVTVDVLDENDNSPVFSQKVYRF 117
T V V +LDENDN P F QK Y+
Sbjct: 1224 PPRSTIARVIVKILDENDNRPQFLQKFYKI 1253
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 88/201 (43%), Gaps = 28/201 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P + P +RY I G+ + F + + +R T+
Sbjct: 46 ENSAAKTYV-GHPRKMGIYILDPSWEIRYKIVSGDSENLFKAEEYVLGDFCFLRIRTKGG 104
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A V V VLD ND P+FS Y
Sbjct: 105 NTAIL------NREVRDHYTLIVKAVEKATDAEARAKVRVQVLDTNDLRPLFSPTSYSV- 157
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 158 ------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKDRTDVFAIHPTSGVVVLT 208
Query: 176 GDPPSDDVE---YELTVEAHD 193
G D +E YEL + A D
Sbjct: 209 GR--LDFLETQLYELEILAAD 227
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI +GN F + +P E++ + +DRE ++ Y+L + A D
Sbjct: 3372 IHYSIIEGNQGSPFTI-DPVRGEVK------------VTKPLDRETISGYTLTVQAADNG 3418
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+P+FS+ Y I+
Sbjct: 3419 NPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVII 3451
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 14/87 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GND+ F + + ++GVL V S +DRE + +Y+L IT D+
Sbjct: 755 YAISGGNDDSCFTI------------DMETGVLKVLS-PLDREVMDKYTLNITVYDLGIP 801
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVY 115
+A + V VLD NDN+P F Q+ Y
Sbjct: 802 QRAAWRLLDVTVLDANDNAPEFLQESY 828
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 113/279 (40%), Gaps = 44/279 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N +S + +DRE+ Y L +TATD
Sbjct: 2956 VSYFITGGDALGQFAVEN-----------VQSDWRVYVKKPLDREQKDSYLLTVTATD-- 3002
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD--LKSSLNSNVSHWKKFSSIGSVSAT 145
G ++ V V VLD NDNSPV + Y + + L L + VSAT
Sbjct: 3003 GTFSSKARVEVKVLDANDNSPVCEKTSYSDTIPEDALPGKL------------VMQVSAT 3050
Query: 146 DAD---GDKVAYKL-AVPSNLVVIVPQTGEL-LLTGDPPSDDVEYELTVEAHDLQSPSRY 200
DAD ++ Y L + + P TGEL L + Y L V+A D S
Sbjct: 3051 DADIRSNAEITYTLFGSGAEKFKLNPDTGELRTLALLDREEQAVYNLLVKATDGGGRSCQ 3110
Query: 201 AREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEME 260
A + VL E + + P+ I T P R+ ++ D +
Sbjct: 3111 A-----------AIVLTLEDVNDNAPEFTAEPYTITVFENTEPGTPLTRVQATDADTGLN 3159
Query: 261 GRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
+I ++L E+ +F I + + I ++++ D ++ +
Sbjct: 3160 RKISYSL-VESADGQFSINERSGIIQLEKHLDRELQAVY 3197
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 107/252 (42%), Gaps = 39/252 (15%)
Query: 50 EIRNSTESKSGV----------LLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVT 97
EIR S SG+ ++ TS +DRE + Y L + ATD +G+ + V
Sbjct: 1069 EIRYSIRDGSGIGVFRIDEETGVIETSDRLDRESTSHYWLTVYATD-QGVVPLSSFIEVY 1127
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAY 154
++V D NDN+P S+ VY + + + K S+ + A D D DK+ Y
Sbjct: 1128 IEVEDVNDNAPQTSEPVYYPEI----------MENSPKDVSVVQIEAFDPDSSSNDKLTY 1177
Query: 155 KLAV--PSNLVVIVPQTGELLLTGDP----PSDDVEYELTVEAHDLQSPSRYAREPAQVW 208
++ P I P+TG + T D+ E+TV + + S AR ++
Sbjct: 1178 RITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEVTVTDNGVPPRSTIARVIVKIL 1237
Query: 209 LQF-NSP-VLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFA 266
+ N P LQ +++ +R+ R +R P R+ ++ D + ++
Sbjct: 1238 DENDNRPQFLQKFYKIRLPEREKADGDRSASKR-----EPLYRVIAADKDEGPNAELSYS 1292
Query: 267 LEKETEREKFKI 278
+E+ E +F I
Sbjct: 1293 IEEGNEHGRFSI 1304
>gi|195388388|ref|XP_002052862.1| GJ19658 [Drosophila virilis]
gi|194149319|gb|EDW65017.1| GJ19658 [Drosophila virilis]
Length = 3639
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 107/215 (49%), Gaps = 23/215 (10%)
Query: 69 IDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE +Y L + ATD A V V VLD NDN P F ++ Y F + +
Sbjct: 1151 LDRESRDRYELTVLATDNGTPAAHARARVLVRVLDANDNDPKFQRESYEFRIEE------ 1204
Query: 128 SNVSHWKKFSSIGSVSATDAD-GDKVAYKLA-VPSNLVVIV-PQTGELLLTGDPPSDDVE 184
+ ++ + +G VSA+DAD G+ A + + +P+N V P TGE + T +P ++
Sbjct: 1205 ----NLRRGAVVGVVSASDADLGENAAIRYSLLPANSSFQVHPVTGE-ISTREPLDREMR 1259
Query: 185 --YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHR--IEK 237
Y+L VEA D +P+R AR P +V + N+P + D Q + R+ + P +
Sbjct: 1260 ELYDLMVEARDQGTPTRSARAPVRVHVTDVNDNAPEIADPQEDVVSVREEQPPGTEVVRI 1319
Query: 238 RRVTRAVRPTKRIDFSETDG-EMEGRIVFALEKET 271
R + R I++S G + +G +F+++ T
Sbjct: 1320 RAIDRDHGQNASINYSLLKGRDSDGHGLFSIDANT 1354
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 113/269 (42%), Gaps = 38/269 (14%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG--INKAE 93
N ++L N T + + +SKSG L+ T G +DRE + YS ++ ATD +
Sbjct: 2027 NSRLVYSLANETQWQF--AIDSKSG-LITTVGKLDRELQSSYSFMVLATDCGRYEVRSGS 2083
Query: 94 THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GD 150
V ++VLD NDN P+F + Y V L + ++ V A DAD
Sbjct: 2084 VAVQINVLDINDNKPIFERYPYSGQVAAL----------IQPGQTLLKVQAHDADQGANG 2133
Query: 151 KVAYKLAVPSNLVV--------IVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYA 201
++ Y L S L I P TG L T S+ +L V A D +P + +
Sbjct: 2134 ELLYALKADSTLTTPAMRSKFRINPNTGALSATQSLASETGRLLQLEVIARDKGNPPQSS 2193
Query: 202 REPAQVWLQFNSPV-----LQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETD 256
++ + +PV Q+E + S A R+ R+ ++++FS
Sbjct: 2194 VGLIELLVGEPNPVAPALHFQNETYRTKLRENSPAGTRLLHVAAVRSDGRRQKLNFSFGA 2253
Query: 257 GEMEGRIVFALEKETEREKFKIRDENPWI 285
G EG +F L+ T +IR NP +
Sbjct: 2254 GNDEG--IFTLDAGTG----EIRVANPQL 2276
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 63/136 (46%), Gaps = 31/136 (22%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL---LVTSGDIDREEVAQYSLV 80
P+ RY+I GN N F L +S + GVL L SG +DRE YSL+
Sbjct: 227 PYNTQRYNIVSGNVNDAFRL---------SSHRERDGVLYLDLQISGFLDRETTPAYSLL 277
Query: 81 ITATD-----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK 135
I A D ++G+ V + + D NDN P+F+Q Y V + N+ V
Sbjct: 278 IEALDGGTPPLRGL----MTVNITIQDVNDNQPIFNQSRYFATVPE-----NATVG---- 324
Query: 136 FSSIGSVSATDADGDK 151
+S+ V A+D D D+
Sbjct: 325 -TSVLQVYASDTDADE 339
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 95/222 (42%), Gaps = 45/222 (20%)
Query: 12 GLPILVASSH---KHPHQLVRYSITQGN--DNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G P+ A +H V YS+ +GN H AL + + +++SG LV S
Sbjct: 969 GAPLFAAHAHDKDSGSSGQVTYSL-KGNATQQHVKALAAGSAPLF--AIDARSG-HLVLS 1024
Query: 67 GDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIV----- 119
+D E ++SL++TATD G+ A+ + VDV D NDN PVF + Y V
Sbjct: 1025 RHLDYETAQRHSLIVTATDA-GLPPLSADLSILVDVQDVNDNPPVFERDEYAVNVSESRA 1083
Query: 120 ----------GDLKSSLNSNVSHW-------KKFSSIGSVSATDADGDKVAYKLAVPSNL 162
DL + N+ +++ S+ SV +D D +
Sbjct: 1084 INAQIIQVNASDLDTGNNARITYRIVDAGTDNASQSLASVGGGGSDADLAQH-------- 1135
Query: 163 VVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSPSRYAR 202
I P +G + L D S D YELTV A D +P+ +AR
Sbjct: 1136 FGIFPNSGWIYLRAALDRESRD-RYELTVLATDNGTPAAHAR 1176
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 82/186 (44%), Gaps = 25/186 (13%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
++ SS VRYSI G+ + F+++ PT+ IR + +D E
Sbjct: 871 VIATSSDTAQRSPVRYSIYSGDPDGYFSIE-PTSGNIR------------IAHPLDHEAK 917
Query: 75 AQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV---GDLKSSLNSNVS 131
AQ L I AT + T V ++V D NDN+P F + R V +L + L + +
Sbjct: 918 AQVLLNIQATSGEPPVYGHTQVNIEVEDVNDNAPEFETSMVRISVPENAELGAPLFAAHA 977
Query: 132 HWKKFSSIGSVSAT---DADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT 188
H K S G V+ + +A V A + L I ++G L+L S ++YE T
Sbjct: 978 HDKDSGSSGQVTYSLKGNATQQHVKALAAGSAPLFAIDARSGHLVL-----SRHLDYE-T 1031
Query: 189 VEAHDL 194
+ H L
Sbjct: 1032 AQRHSL 1037
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 12/109 (11%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
D E+ +Y L + A+D+ G A V +++ ++ +P F+++ YRF+ L +
Sbjct: 2984 FDYEQRQRYHLQLRASDMGG-RSARVAVRIEIESRDEFTPQFTERTYRFV-------LPA 3035
Query: 129 NVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGELLL 174
+ + F +G V+ATDAD +V Y+L+ P + + +G +L+
Sbjct: 3036 SAALPLGF-VVGQVTATDADSGADGRVVYQLSAPHSHFKVNRSSGAVLI 3083
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 14/84 (16%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN--K 91
+G D H FAL +T S L++ + +DRE + Y+L + ATD KG
Sbjct: 460 KGGDGH-FAL----------TTRDNSIYLVIVNLPLDREATSNYTLSVVATD-KGTPPLH 507
Query: 92 AETHVTVDVLDENDNSPVFSQKVY 115
A + + V D NDN+P F Q VY
Sbjct: 508 ASKSIFLRVTDVNDNAPEFEQDVY 531
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 111/268 (41%), Gaps = 53/268 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN + F + ++++G L S +DRE+ A+Y+L + A+D +
Sbjct: 1925 IVYSIIGGNLGNKFNI------------DARTGELSARS--LDREQHARYTLQLQASD-R 1969
Query: 88 G---INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
G + +++V V D+NDN P F +L + S SS+ S+ A
Sbjct: 1970 GQPITQQGHCNISVFVEDQNDNEPRF----------ELSKYMASVPEDAAIGSSVLSIKA 2019
Query: 145 TDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE--YELTVEAHDLQSPSR 199
+DAD ++ Y LA + + L+ T +++ Y V A D R
Sbjct: 2020 SDADLGVNSRLVYSLANETQWQFAIDSKSGLITTVGKLDRELQSSYSFMVLATDC---GR 2076
Query: 200 YAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTK---RIDFSETD 256
Y V +Q N +L + D K +V ++P + ++ + D
Sbjct: 2077 YEVRSGSVAVQIN--------VLDINDNKPIFERYPYSGQVAALIQPGQTLLKVQAHDAD 2128
Query: 257 GEMEGRIVFALEKETE------REKFKI 278
G +++AL+ ++ R KF+I
Sbjct: 2129 QGANGELLYALKADSTLTTPAMRSKFRI 2156
>gi|148703591|gb|EDL35538.1| mCG141119 [Mus musculus]
Length = 4592
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 124/294 (42%), Gaps = 44/294 (14%)
Query: 16 LVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVA 75
V H V Y I GN F + NP + I +T +D E +
Sbjct: 1689 FVGMVSAHSQSSVMYEIRDGNMGDAFNI-NPHSGSI------------ITQRALDFETLP 1735
Query: 76 QYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK 135
YSL + T++ G++ T V V V DENDN PVF+Q Y + + +S+NS V +
Sbjct: 1736 MYSLTVQGTNMAGLS-TNTTVVVHVRDENDNPPVFTQAEYSGFISE-SASVNSVVLTDRN 1793
Query: 136 FSSIGSVSATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELT 188
+ + ATDAD + + Y++ PS N I P TG + +L+ D + + T
Sbjct: 1794 VPLV--IRATDADRESNALLVYQIVEPSVHNYFAIDPTTGAIRTVLSLD-YEETHAFHFT 1850
Query: 189 VEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTK 248
V+ HD+ +P +A A V + +ID P + + PT
Sbjct: 1851 VQVHDMGTPRLFAEYAANV-------------TVHVIDINDCPPVFSKSLYEVSLLLPTY 1897
Query: 249 R------IDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
R ++ ++ D + ++++++ + EKF + + I + +R +
Sbjct: 1898 RGVNVITVNATDADSKAFSQVMYSITEGNIGEKFSMDHKTGTIAIQNTTQLRSR 1951
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 32/199 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + Y+I GN++ F++ +SK+G + +
Sbjct: 3250 GTEVLQVYAASRDIEANAEITYAIISGNEHGKFSI------------DSKTGAIFIIES- 3296
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L + ATD ++ T V ++V D NDNSPVFSQ Y +V + ++L
Sbjct: 3297 LDYESSHEYYLTVEATDGGTPSLSDVAT-VNINVTDINDNSPVFSQDTYTTVVSE-DAAL 3354
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
V ++ A DADG + Y + + I P GE+ +T +
Sbjct: 3355 EQPVI---------TIMADDADGPSNSHIHYSIIEGNQGSPFTIDPVRGEVKVTKPLDRE 3405
Query: 182 DVE-YELTVEAHDLQSPSR 199
+ Y LTV+A D +P R
Sbjct: 3406 TISGYTLTVQAADNGNPPR 3424
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 15/90 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y IT GN F++ K+G++ TS +DRE+ ++ L +T TD G+
Sbjct: 1179 YRITSGNPQGFFSI------------HPKTGLITTTSRKLDREQQDEHILEVTVTD-NGV 1225
Query: 90 NKAET--HVTVDVLDENDNSPVFSQKVYRF 117
T V V +LDENDN P F QK Y+
Sbjct: 1226 PPRSTIARVIVKILDENDNRPQFLQKFYKI 1255
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 88/201 (43%), Gaps = 28/201 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P + P +RY I G+ + F + + +R T+
Sbjct: 46 ENSAAKTYV-GHPRKMGIYILDPSWEIRYKIVSGDSENLFKAEEYVLGDFCFLRIRTKGG 104
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A V V VLD ND P+FS Y
Sbjct: 105 NTAIL------NREVRDHYTLIVKAVEKATDAEARAKVRVQVLDTNDLRPLFSPTSYSV- 157
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 158 ------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKDRTDVFAIHPTSGVVVLT 208
Query: 176 GDPPSDDVE---YELTVEAHD 193
G D +E YEL + A D
Sbjct: 209 GR--LDFLETQLYELEILAAD 227
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI +GN F + +P E++ + +DRE ++ Y+L + A D
Sbjct: 3374 IHYSIIEGNQGSPFTI-DPVRGEVK------------VTKPLDRETISGYTLTVQAADNG 3420
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+P+FS+ Y I+
Sbjct: 3421 NPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVII 3453
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 14/87 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GND+ F + + ++GVL V S +DRE + +Y+L IT D+
Sbjct: 755 YAISGGNDDSCFTI------------DMETGVLKVLS-PLDREVMDKYTLNITVYDLGIP 801
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVY 115
+A + V VLD NDN+P F Q+ Y
Sbjct: 802 QRAAWRLLDVTVLDANDNAPEFLQESY 828
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 113/279 (40%), Gaps = 44/279 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N +S + +DRE+ Y L +TATD
Sbjct: 2958 VSYFITGGDALGQFAVEN-----------VQSDWRVYVKKPLDREQKDSYLLTVTATD-- 3004
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD--LKSSLNSNVSHWKKFSSIGSVSAT 145
G ++ V V VLD NDNSPV + Y + + L L + VSAT
Sbjct: 3005 GTFSSKARVEVKVLDANDNSPVCEKTSYSDTIPEDALPGKL------------VMQVSAT 3052
Query: 146 DAD---GDKVAYKL-AVPSNLVVIVPQTGEL-LLTGDPPSDDVEYELTVEAHDLQSPSRY 200
DAD ++ Y L + + P TGEL L + Y L V+A D S
Sbjct: 3053 DADIRSNAEITYTLFGSGAEKFKLNPDTGELRTLALLDREEQAVYNLLVKATDGGGRSCQ 3112
Query: 201 AREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEME 260
A + VL E + + P+ I T P R+ ++ D +
Sbjct: 3113 A-----------AIVLTLEDVNDNAPEFTAEPYTITVFENTEPGTPLTRVQATDADTGLN 3161
Query: 261 GRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
+I ++L E+ +F I + + I ++++ D ++ +
Sbjct: 3162 RKISYSL-VESADGQFSINERSGIIQLEKHLDRELQAVY 3199
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 110/264 (41%), Gaps = 40/264 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYSI G+ F + E ++ TS +DRE + Y L + ATD +
Sbjct: 1070 IRYSIRDGSGIGVFRID-----------EETGKCVIETSDRLDRESTSHYWLTVYATD-Q 1117
Query: 88 GINKAET--HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G+ + V ++V D NDN+P S+ VY + + + K S+ + A
Sbjct: 1118 GVVPLSSFIEVYIEVEDVNDNAPQTSEPVYYPEI----------MENSPKDVSVVQIEAF 1167
Query: 146 DADG---DKVAYKLAV--PSNLVVIVPQTGELLLTGDP----PSDDVEYELTVEAHDLQS 196
D D DK+ Y++ P I P+TG + T D+ E+TV + +
Sbjct: 1168 DPDSSSNDKLTYRITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEVTVTDNGVPP 1227
Query: 197 PSRYAREPAQVWLQF-NSP-VLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSE 254
S AR ++ + N P LQ +++ +R+ R +R P R+ ++
Sbjct: 1228 RSTIARVIVKILDENDNRPQFLQKFYKIRLPEREKADGDRSASKR-----EPLYRVIAAD 1282
Query: 255 TDGEMEGRIVFALEKETEREKFKI 278
D + +++E+ E +F I
Sbjct: 1283 KDEGPNAELSYSIEEGNEHGRFSI 1306
>gi|395504746|ref|XP_003756708.1| PREDICTED: protocadherin beta-2-like [Sarcophilus harrisii]
Length = 814
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 64/116 (55%), Gaps = 22/116 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT D+ K+E ++TV + D NDNSPVF+Q+ Y + +
Sbjct: 421 LVTEGALDREYKAEYNITITVMDLGSPRLKSEYNITVLISDVNDNSPVFTQRAYTLYLQE 480
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVIVPQTGELLL 174
NS V H IGSVSA+D D KV Y L + P+TGEL L
Sbjct: 481 ----NNSPVLH------IGSVSASDRDSGINAKVTYSL--------LPPETGELPL 518
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 20/117 (17%)
Query: 38 NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HV 96
N+T + +IR+S + K LV +DREE + L +TA D ++ T +
Sbjct: 188 NYTIGTNSHFHSQIRDS-KGKRYPELVLDKALDREEQPEVRLTLTAVDGGTPQRSGTVQI 246
Query: 97 TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG----SVSATDADG 149
+ V+D NDN+PVF+Q Y + + SSIG +VSATD D
Sbjct: 247 RILVVDINDNAPVFTQSQYE--------------AQIPENSSIGFRVVTVSATDLDA 289
>gi|158297323|ref|XP_317578.4| AGAP007905-PA [Anopheles gambiae str. PEST]
gi|157015140|gb|EAA12903.4| AGAP007905-PA [Anopheles gambiae str. PEST]
Length = 2864
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 118/246 (47%), Gaps = 40/246 (16%)
Query: 69 IDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+DRE +Y++ + +D G+ A HV V +LD NDNSP+F++ +Y F + +
Sbjct: 488 LDREVKERYNITVIVSD-NGVPTLTATAHVIVTILDANDNSPIFAKSLYEFEIEE----- 541
Query: 127 NSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVV-IVPQTGELLLTGDPPSDD 182
+ ++ + IG+VSA+D+D V Y L +PSN I P +GE + T D +
Sbjct: 542 -----NMRRGAMIGTVSASDSDAGINAVVRYSL-IPSNTSFQINPVSGE-ITTRDSLDRE 594
Query: 183 VE--YELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQMIDRKSEAPHRIEK 237
+ Y+L VEA D +P R +R +V + N+P + D Q ++ + E P E
Sbjct: 595 TKASYDLVVEARDQGTPYRSSRVSVKVQILDVNDNAPDIVDPQ-EDVVSVREEQPIGTEV 653
Query: 238 RRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKK 297
+V RA+ + D I +++ K + + + + +P +G +R K
Sbjct: 654 VKV-RAI---------DRDHGQNASISYSILKGRDSDGYGMFSIDPM-----SGVIRTKT 698
Query: 298 RWDFEE 303
D EE
Sbjct: 699 SLDHEE 704
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 17/113 (15%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D E+ ++ L + A+D + A T +TV V+D NDN+PVF Q Y ++ D N+
Sbjct: 1807 LDYEDRHEFLLRLLASDSAHV--ARTTLTVRVVDVNDNAPVFQQITYHAMLSDSTDGSNT 1864
Query: 129 NVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVV-----IVPQTGELL 173
NV I SV+ATDAD + V Y + P +V+ I TG+L
Sbjct: 1865 NV-------MILSVNATDADSEPNAIVRYSIVPPKGMVMASGFTIDESTGQLF 1910
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 49/263 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI+ GN + F++ + +G L T+ +DRE A+Y L ITA D +
Sbjct: 1245 ITYSISGGNMGNKFSI------------DLHTGAL--TARPLDREVHARYVLQITAQD-R 1289
Query: 88 GI---NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
G ++ ++T+ V DENDN P F + Y + D + + + V +V A
Sbjct: 1290 GSPVSHQGHCNITIRVEDENDNDPKFELQKYIATI-DEDAQIGTTVL---------TVKA 1339
Query: 145 TDAD---GDKVAYKLA-VPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSPS 198
DAD ++ Y LA V L I +TG + G D +V + V + +
Sbjct: 1340 IDADVGINARIVYSLANVTEWLFDIDSKTGVITTAGLFDRERQNVYNFMVVAMDGGRYNA 1399
Query: 199 RYAREPAQVWL---QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSET 255
R P QV + N PV + P R + + + + I +++
Sbjct: 1400 RSQNVPVQVIIADVNDNKPVFD------------KYPFREQIGALVQPGQTLLHISATDS 1447
Query: 256 DGEMEGRIVFALEKETEREKFKI 278
D G IV++L + KF+I
Sbjct: 1448 DQGSNGEIVYSLNENASNGKFRI 1470
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 17/108 (15%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVT--VDVLDENDNSPVFS 111
S +S+SG L + +D E + +++LV+TA+D G T++T V+V D NDN+P+F
Sbjct: 353 SMDSRSGHLTLAR-PLDYESMQRHTLVVTASD-SGTPSLSTNLTILVEVQDVNDNAPIFE 410
Query: 112 QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL 156
+ Y V + S I VSATDAD ++ YK+
Sbjct: 411 KNEYAISV----------IESTPSNSQILQVSATDADTGNNARLTYKI 448
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 49/114 (42%), Gaps = 15/114 (13%)
Query: 10 VKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDI 69
+ L L A P V Y I GND+ F++ + SG LL T+ +
Sbjct: 2093 IAKLSALDADLSGSPSSEVIYQIISGNDSGMFSI------------DLVSG-LLYTNKYL 2139
Query: 70 DREE-VAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
D + QYSLV+ A D + H T+ + DENDN P F Y VG+
Sbjct: 2140 DYDHGQTQYSLVVRACDSHSAPRCSVHPFTIALSDENDNEPQFPVPEYLEFVGE 2193
>gi|311250323|ref|XP_003124099.1| PREDICTED: protocadherin beta-4-like [Sus scrofa]
Length = 800
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 72/148 (48%), Gaps = 31/148 (20%)
Query: 37 DNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH- 95
DN F LK PT K+ LVT +DREE A+Y++ I+ +D+ + H
Sbjct: 385 DNLPFVLK-PTF---------KNYYTLVTESPLDREERAEYNITISVSDLGTPRRHTQHN 434
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KV 152
+TV V D NDN+P FSQ Y V + NS H IG+V ATDAD ++
Sbjct: 435 LTVRVADVNDNAPAFSQPAYTLRVRE----NNSPALH------IGTVRATDADAGANAQL 484
Query: 153 AYKLAVPSN-------LVVIVPQTGELL 173
Y L PS+ LV I P TG+L
Sbjct: 485 TYSLLPPSDPHLPLASLVAINPDTGQLF 512
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 33/183 (18%)
Query: 28 VRYSITQGND--NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
V Y Q +D TF++ N T EIR + + +D E++ Y L I ATD
Sbjct: 275 VSYGFFQASDEIKQTFSI-NEVTGEIRLTKK------------LDFEQMKSYHLKIEATD 321
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G++ T V ++V+D NDN+P + SSL S+V + +
Sbjct: 322 GGGLSGKGT-VVIEVVDVNDNAPELT-----------ISSLTSSVPENSPETVVAVFRIR 369
Query: 146 DAD-GDKVAYKLAVPSNLVVIVPQTGE--LLLTGDPPSD---DVEYELTVEAHDLQSPSR 199
D D GD ++P NL ++ T + L + P D EY +T+ DL +P R
Sbjct: 370 DRDSGDNGKMICSIPDNLPFVLKPTFKNYYTLVTESPLDREERAEYNITISVSDLGTPRR 429
Query: 200 YAR 202
+ +
Sbjct: 430 HTQ 432
>gi|443732026|gb|ELU16918.1| hypothetical protein CAPTEDRAFT_222008 [Capitella teleta]
Length = 4878
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 38/277 (13%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH 95
N +++A + T + + +S SG + V + +DRE +Y L + A D G +ET
Sbjct: 2790 NAANSYAFISSTNGQF--AIDSASGNITVAT-PLDRESKDEYILDVAAND--GAYNSETS 2844
Query: 96 VTVDVLDENDNSPVFSQKVYRF-IVGDLKSSLNSNVSHWKKFSSIGSVSATDADG----D 150
V++ +LD NDN P F Y F IVG S V +S+G VSATDAD
Sbjct: 2845 VSIFILDVNDNQPQFDMNRYSFSIVG------GSPVG-----TSVGQVSATDADAPGPNS 2893
Query: 151 KVAYKLAVPSNLVVIVPQTG--------ELLLTGDPPSDDVEYELTVEAHDLQSPSRYAR 202
V Y+ P++L I P++G + L G PS + LTV D P +
Sbjct: 2894 DVFYRFKQPTSLFTIHPESGVVSSRKEVQFQLAGVSPSPENNQRLTVVVFDRGEPPMRSE 2953
Query: 203 EPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGR 262
P + +L + + D KS + E +V R V + S+ D
Sbjct: 2954 VPLTI------SILPSNENTPLFDEKSYSMSIEENWQVGRVV---GTVTASDADIGANAE 3004
Query: 263 IVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
+ +++ + F I E I++ + +V K++
Sbjct: 3005 LTYSVTSGNGTDYFVIDAETGVISLSASVASKVNKKF 3041
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 71/152 (46%), Gaps = 28/152 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I GN F + G L +T +DRE V+ Y L I A D+
Sbjct: 1015 VTYEIVGGNKERKFGIF-------------PDGALYITQ-PLDREAVSLYVLTIRARDMG 1060
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
++ T+VT+ VLD NDN P FS K + F + V + + +S+G+V A+D
Sbjct: 1061 SPQRSSLTNVTISVLDNNDNDPKFSNKTFSFEL----------VENSPRGTSVGTVYASD 1110
Query: 147 ADGDK---VAYKLAVPSNLVVIVPQTGELLLT 175
D + ++Y + S+ I P++G L+ T
Sbjct: 1111 RDTGRNAEMSYHIDGESSGFAIDPRSGMLVAT 1142
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 25/158 (15%)
Query: 48 THEIRNSTESK------SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL 101
T+ IR +E K GV+ V G +DRE + L+I A D G ++E V V+V
Sbjct: 1756 TYSIREGSEKKFDIDPLRGVIRVI-GSLDRESKPYFELIIVADD--GNQRSEAKVIVEVT 1812
Query: 102 DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV 158
D ND +P F++ +Y F + + + + + +G +SATD D ++ Y L
Sbjct: 1813 DVNDKTPEFTEPIYAFDIPE----------NTRTGARLGQISATDLDEGSNAELTYSLIT 1862
Query: 159 --PSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
+ V + P +G + L G ++V Y LTV+ D
Sbjct: 1863 HWGRDKVSLHPHSGVVTLIGALDYEEVPLYILTVKVQD 1900
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 30/186 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
YSI G+DN F + S +G + G IDRE V YSL + A+
Sbjct: 811 YSIINGDDNGDFVVG------------SINGQIKTAKG-IDREIVQFYSLTVIASSDTYF 857
Query: 90 NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
+ E ++T++ D NDNSPVF V + +W + SA D D
Sbjct: 858 SSVEVNITIN--DLNDNSPVFQLPAIATTVKE----------NWPVGHDVHLASAVDPDA 905
Query: 150 ---DKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD--DVEYELTVEAHDLQSPSRYAREP 204
++ Y+L S+ V ++ + ++ P S D +L VEA D PS +++
Sbjct: 906 GSNGRLTYRLMPGSSSVFVIDEVTGMITVAQPLSQLTDSVVDLFVEAKDGGVPSLSSQQT 965
Query: 205 AQVWLQ 210
+ ++
Sbjct: 966 VHIHIE 971
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 30/145 (20%)
Query: 17 VASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQ 76
VA++ P +V Y I GN F + + +RN+ +D E
Sbjct: 2574 VAATSPRPQAVVSYFIAGGNTGDAFGILDDGRLIVRNA--------------LDYETTHS 2619
Query: 77 YSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK 135
Y L + A D + H + +D+LDENDN+PVFSQ + N++V+ +
Sbjct: 2620 YHLWVEARDNSDPPLSAYHNLILDILDENDNAPVFSQHFF-----------NTSVAEGEY 2668
Query: 136 FS-SIGSVSATDAD-GD--KVAYKL 156
S ++ V+A DAD GD ++ Y L
Sbjct: 2669 GSLNVLQVTAVDADTGDNARITYAL 2693
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 16/144 (11%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA----ETHVTVDVLDENDNSPVF- 110
++++GV+ T+ +D E Y L I A D + A E VT++V D NDN+P F
Sbjct: 1452 DAQTGVI-TTAKSLDHEMAESYQLTIVAADQAYPSSARKSSEKIVTINVHDLNDNAPDFT 1510
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSI-GSVSATDADGDKVAYKLAVPSNLVVIVPQT 169
S ++G L ++L + V+ + S + G V+ +GD ++ I T
Sbjct: 1511 SVTAVPVLIGSLANTLVTTVTAVDRDSGMNGRVNYEIYNGDTDMFR---------INSDT 1561
Query: 170 GELLLTGDPPSDDVEYELTVEAHD 193
G+L L + S + Y+LT+ A D
Sbjct: 1562 GDLYLRSNLNSQVLTYDLTIRARD 1585
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 48 THEIRNSTESKSGVLLVTSGDI------DREEVAQYSLVITATDVKGINKAETH-VTVDV 100
T+ + E+ V+ TSG I DRE V Y LV+TATD + T V V V
Sbjct: 2690 TYALEAGNEAGMFVIDKTSGGIRTQMRLDRETVDAYQLVVTATDHGNPRQTSTATVEVHV 2749
Query: 101 LDENDNSPVFSQ 112
D+ND+ P+FSQ
Sbjct: 2750 SDKNDHPPLFSQ 2761
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
SGV+ + G +D EEV Y L + D I+ + T V ++V+D NDN+P+F Y
Sbjct: 1875 SGVVTLI-GALDYEEVPLYILTVKVQDSGPISLSSTSTVLINVIDTNDNAPIFDPSTY 1931
>gi|156399515|ref|XP_001638547.1| predicted protein [Nematostella vectensis]
gi|156225668|gb|EDO46484.1| predicted protein [Nematostella vectensis]
Length = 3186
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 122/291 (41%), Gaps = 54/291 (18%)
Query: 17 VASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQ 76
VA + + ++Y I GN N FA+ NP+ SGV+L T ++D EE
Sbjct: 1541 VAVAKAATSEALKYEILSGNTNDMFAI-NPS-----------SGVILTTR-ELDYEEATG 1587
Query: 77 YSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKF 136
Y + I A D + A V ++V++ NDN P+F G+ ++ V+
Sbjct: 1588 YIMNIIARDTRD-RSASVQVIINVVNINDNEPMFP--------GETNGQIDRKVAGPFAP 1638
Query: 137 SSIGS-VSATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDL 194
I + ++A D D GD+V YK+++ + + + G+L+ D + T+EA D
Sbjct: 1639 GFIATRLTAVDKDIGDRVYYKISIEAENYFTIDERGQLICKNDLKGIASPFRFTIEARDG 1698
Query: 195 QSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSE 254
P + A V L F + R + P R+ TRA R+
Sbjct: 1699 GLPQKV--HTANVLLVF------------VNYRPKQQPVRVIVPETTRAGTVITRVPRYF 1744
Query: 255 TDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEELG 305
GE IV+ E+ F T+D +G+V + + D+EE+
Sbjct: 1745 PTGEFS--IVYP-----EKTNF---------TIDNDGNVTLNRPLDYEEIA 1779
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 76/164 (46%), Gaps = 33/164 (20%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+K G V I V +++ + L++YS GN F + + SG
Sbjct: 1220 ENTKVGQQV----ISVKATYGDSNALLQYSFVSGNLGDAFCIDS-------------SGQ 1262
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+ V +DRE + Y+L + G N+ T V V + D ND+SP F++ VY F
Sbjct: 1263 ITVAQ-PLDREVLPSYTLRVRV--ALGNNEDFTEVVVSLTDINDDSPTFTKSVYEFFA-- 1317
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNL 162
N ++S +SIG V+ATD D +++Y+ S++
Sbjct: 1318 -----NEDISSG---TSIGKVAATDRDSGSHGQISYRFLYASDI 1353
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 120/280 (42%), Gaps = 54/280 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATD-VKGINKAE-----THVTVDVLDENDNSPVFSQKVYR 116
++T+ +DRE A Y+++ITA D G + AE + V+V D NDN P F + Y
Sbjct: 2276 VITTSSLDRETKATYTVIITAEDGGHGKDPAERLMSYCFLEVEVQDVNDNYPSFITRAY- 2334
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GD--KVAYKLAVPSNLVVIVPQTGEL- 172
L S + +S+ +VSATD D GD K+ Y P++ I +G++
Sbjct: 2335 ---------LGSIQNTKPIGTSVLTVSATDPDAGDNAKITYAFKSPNDKFEIDSTSGDIR 2385
Query: 173 ---LLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKS 229
LTG + DV ++TV A + ++ +Q +D + I
Sbjct: 2386 TKVALTG---TKDVNEKMTVVASNTEA------------IQGGDANNRDRETEVTIYITD 2430
Query: 230 EAPHRIEKRRVTRAVRPTKRI--DFSETDGEMEG--RIVFALEKETE--REKFKIRDENP 283
AP +K T + + + D + + G IV++ K EKF
Sbjct: 2431 LAPPVCDKNLFTARILESLSVNSDVLKVSAQAPGGKSIVYSPVKANADIDEKF------- 2483
Query: 284 WITVDENGDVRVKKRWDFEELGP-EKTIDFWVTINNQATN 322
+V+ NG ++ + D+E+L P +KT V + TN
Sbjct: 2484 --SVETNGQIKTASQLDYEQLSPGDKTFKLQVRAQEENTN 2521
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 28/168 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI QG+ F ++ T L+ + +DRE+++ Y LVI A D
Sbjct: 507 VVYSIIQGSGLGVFQVQATTGD-------------LIVAAPLDREKMSFYDLVIKAEDKA 553
Query: 88 GINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
K+ +V V + D +D+ P F+Q +Y + KS N+ V+ K D
Sbjct: 554 TFPKSSNLYVMVKIQDVDDHFPQFTQPMY-YAKAPEKSPENTFVTVVK---------VVD 603
Query: 147 AD-GDKVAYKLAVPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEA 191
D G+ V+Y + + IVP +G +L TG D ++ YEL V A
Sbjct: 604 HDLGESVSYSITGACSF-KIVPTSGLILTTGPIDLTTEPSTYELVVTA 650
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 9/151 (5%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHV--TVDVLDENDNSPVFS 111
S +S VLL+ +DRE Y L + T G T V V V D NDN+P+F+
Sbjct: 1048 SIDSSGRVLLLRQ--LDRERTKSYKLYVRGTYTGGSLTLATDVECLVTVTDVNDNTPLFT 1105
Query: 112 -QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTG 170
+V + V D + N+ ++ + S +A ++ + VPSN + +
Sbjct: 1106 FDRVNKQFVVDNYAPANTIIATLRAVDSDEGANAQVT----MSIQGTVPSNAPITIDTPS 1161
Query: 171 ELLLTGDPPSDDVEYELTVEAHDLQSPSRYA 201
+L T S ++Y++TV A D SP +Y+
Sbjct: 1162 NVLKTTTKLSTVIDYQITVRATDKGSPPQYS 1192
>gi|357623109|gb|EHJ74393.1| cadherin [Danaus plexippus]
Length = 2755
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 107/244 (43%), Gaps = 46/244 (18%)
Query: 69 IDREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+DRE +A++ + I ATD GI T + V+V+D NDN P FSQ Y F+V +
Sbjct: 459 LDRESIAKHKMTIIATD-NGIPPLSTTASLIVNVVDANDNDPAFSQASYEFLVEE----- 512
Query: 127 NSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAV-PSNLVVIV-PQTGELLLTGDPPSD-- 181
+ K + +G +SATDAD GD K ++ PSN +V P TG ++T D
Sbjct: 513 -----NQKVGAFVGKISATDADIGDNAVIKYSLFPSNTSFVVNPSTG--VITAKEVLDRE 565
Query: 182 -DVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRV 240
Y L EA D + + R P + ++ D +P I+ R
Sbjct: 566 YKNTYLLFAEARDQGTLPKSVRVPVTI---------------KVTDVNDNSPEIIDPRED 610
Query: 241 TRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDEN-GDVRVKKRW 299
+V K ID D + +++++ E + + F + +D N G ++
Sbjct: 611 VVSVSRVKAID---RDNGINASVLYSILNERDMDGFGV------FVIDSNTGVIKTSTVL 661
Query: 300 DFEE 303
D EE
Sbjct: 662 DHEE 665
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 119/298 (39%), Gaps = 56/298 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGN-DNHTFALKNPTTHEIRNSTESKSG 60
E+ +SGT V L QLVRYSI G+ DNH F + E+ +G
Sbjct: 198 EDVRSGTIVGNLKATAGG-----KQLVRYSIISGDIDNH-FTI------------ETHTG 239
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+ TS +DRE + Y L + A + +T V + + D NDN P F
Sbjct: 240 AIR-TSKSLDRETTSSYLLNVRAATGNPPSYDQTQVQITLEDVNDNVPEFG--------- 289
Query: 121 DLKSSLNSNVSHWKKFSSI-GSVSATDADGDK---VAYKLAV---PSNLVVIVPQTGEL- 172
SS+ +V+ + SI + ATD D K V Y+L P+N + Q G +
Sbjct: 290 --TSSVRVSVAESAQIGSIVYAARATDEDEGKNGMVTYQLVSATGPANTFAVNSQHGLVT 347
Query: 173 LLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQLLQMIDRKS 229
LL + V + + + A D +P A V +Q NSPV + + +
Sbjct: 348 LLRLLDYENLVRHTVIISAQDSGNPQLSANLTLVVDVQDINDNSPVFEHDTYTANV---- 403
Query: 230 EAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFAL--EKETEREKFKIRDENPWI 285
+E V + + ID D RI + + E T E FK++ W+
Sbjct: 404 -----LESDAVKTKILEVQAID---KDTGNNARITYRVVSENNTNEEHFKVQPSTGWV 453
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 30/156 (19%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
++ YSI+ GN+ + F + ++ +G L T+ +DRE A+Y L I A D
Sbjct: 1179 VITYSISSGNNGNKFTI------------DATTGKL--TAKTLDRETQAKYDLTIVAYDH 1224
Query: 87 KG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+ ++TV V D+NDN PVF Y + + +S++ +SI V A
Sbjct: 1225 GSPVALQGACNLTVMVEDQNDNDPVFDTGHYSATIPE-DASID---------TSIIKVRA 1274
Query: 145 TDAD---GDKVAYKLAVPS-NLVVIVPQTGELLLTG 176
TDAD ++ Y LA S L I ++G + TG
Sbjct: 1275 TDADLGFNKRIVYSLANESQGLFRIDNKSGVIYTTG 1310
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 17/137 (12%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D E Y + I+A+D G + A T +T+ + D NDN+PVF Y ++ + L
Sbjct: 1733 LDYENKKVYEVNISASD--GEHVARTTLTIKITDINDNTPVFDDITYNRVLPEGSGIL-- 1788
Query: 129 NVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVIVPQTGELLLTGDP-PSDDVE 184
IG VSA D D + K+ Y + PS I +TG L + P +
Sbjct: 1789 ---------EIGCVSAKDIDSEENGKITYSILDPSPGYYIDAETGVLFVNYSALPGSKRD 1839
Query: 185 YELTVEAHDLQSPSRYA 201
++ V A D P+R A
Sbjct: 1840 KQIPVIATDHGKPNRSA 1856
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 15/122 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E+ K G + L I A + P+ V ++IT G+DN+ F + +PTT G
Sbjct: 1992 EDVKIGHTLTQLTINDADLYGTPNSAVVFNITSGDDNNLFYI-HPTT-----------GS 2039
Query: 62 LLVT-SGDIDREEVAQYSLVITAT-DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
L V S D D + +++ L+I AT + G + + V +LDENDN+P F Y +
Sbjct: 2040 LTVNKSLDYDTGK-SKHKLIIVATLNPWGTDCNAVFIKVQILDENDNTPTFPVSEYFETI 2098
Query: 120 GD 121
G+
Sbjct: 2099 GE 2100
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 56/138 (40%), Gaps = 19/138 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETH----VTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
IDREE QY + TD V+V+VLD NDNSP F + S
Sbjct: 1100 IDREEADQYIFPVYVTDSSTFQSTANFDVATVSVNVLDVNDNSPTFK----------IGS 1149
Query: 125 SLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPS----NLVVIVPQTGELLLTGDPP 179
V + I +V+ATD D G ++ S N I TG+L
Sbjct: 1150 CYTLTVPENNEPEVIHTVTATDKDIGANGVITYSISSGNNGNKFTIDATTGKLTAKTLDR 1209
Query: 180 SDDVEYELTVEAHDLQSP 197
+Y+LT+ A+D SP
Sbjct: 1210 ETQAKYDLTIVAYDHGSP 1227
>gi|350581230|ref|XP_003354374.2| PREDICTED: protocadherin beta-15-like [Sus scrofa]
Length = 799
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 63/122 (51%), Gaps = 21/122 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ I+ +D+ + H +TV V D NDN+P FSQ Y V +
Sbjct: 403 LVTDGPLDRESQAEYNITISVSDLGTPRRHTQHNLTVRVADVNDNAPAFSQPAYTLRVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H IG+V ATDAD ++ Y L PS+ LV I P TG+
Sbjct: 463 ----NNSPALH------IGTVRATDADAGANAQLTYSLLPPSDPHLPLASLVAINPDTGQ 512
Query: 172 LL 173
L
Sbjct: 513 LF 514
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 19/123 (15%)
Query: 35 GNDNHTFALKNPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK 91
GN+N +P ++ RN + + LV ++DREE A+ L +TA D +
Sbjct: 163 GNNNIQNYSISPNSYFHVSTRNRGDGRKYPELVLDKELDREEQAELRLTVTALDGGSPPR 222
Query: 92 AET-HVTVDVLDENDNSPVFSQKVYRFIVG---------------DLKSSLNSNVSHWKK 135
+ T V + ++D NDN+P F+Q Y+ V DL + N +S+
Sbjct: 223 SGTAQVRILIVDVNDNAPEFAQTHYQVQVPEDSPVGTLVVKVSARDLDAGTNGEISYSLF 282
Query: 136 FSS 138
+SS
Sbjct: 283 YSS 285
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 18/140 (12%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D E V+ Y L I A+D G++ + V+++V+D NDNSP + SSL S
Sbjct: 307 LDFETVSSYELDIDASDGGGLS-GKCSVSIEVVDVNDNSPELT-----------ISSLTS 354
Query: 129 NVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTGE--LLLTGDPPSD---D 182
+ + + D D GD ++ +L ++ + E L D P D
Sbjct: 355 PIPENAPETEVALFRIRDRDSGDNGRMVCSIQDDLPFLLKPSEENFYTLVTDGPLDRESQ 414
Query: 183 VEYELTVEAHDLQSPSRYAR 202
EY +T+ DL +P R+ +
Sbjct: 415 AEYNITISVSDLGTPRRHTQ 434
>gi|307197254|gb|EFN78559.1| Protein dachsous [Harpegnathos saltator]
Length = 2617
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 113/245 (46%), Gaps = 36/245 (14%)
Query: 68 DIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
++DRE V + +L + A D A V V VLD+NDN P F + Y F +
Sbjct: 311 NLDRETVDRITLTVFAADNGSPAATANASVLVKVLDDNDNDPRFEKDFYGFKL------- 363
Query: 127 NSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDV 183
+ + + +GSV+ATD D DK + Y + ++ + P TG+ + T +P +
Sbjct: 364 ---LENLPSGTLVGSVNATDPDLDKNSLLRYSVVQSNSSFAVDPDTGK-ITTREPLDRET 419
Query: 184 E--YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHRIEKR 238
+ +EL +EA D +PSR R P +V + NSP + D Q ++ + E P E
Sbjct: 420 KEVHELVLEARDQGTPSRATRVPMKVTVLDVNDNSPEIVDPQ-RDVVSVREEQPPGTEVA 478
Query: 239 RVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKR 298
RV RA+ +TD + +++ K+ + + + + +P G +R K
Sbjct: 479 RV-RAL---------DTDFGENASVTYSILKDRDSDGYNVFTIDPI-----TGMIRTKAV 523
Query: 299 WDFEE 303
D EE
Sbjct: 524 LDHEE 528
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 118/294 (40%), Gaps = 61/294 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN F L E SG+L + S +DRE +++Y L I+A D K
Sbjct: 1017 ISYSIIGGNIGSKFTL------------EPSSGMLSMFS--LDRETISKYVLTISAKD-K 1061
Query: 88 GINKAETH--VTVDVLDENDNSPVFSQKVYR--------------FIVGDLKSSLNSNVS 131
G E H +TV VLD NDN+P F Q Y G +SS
Sbjct: 1062 GRPSLEAHCNLTVIVLDVNDNAPTFLQDQYAESHSRGNSQSLEYGLSNGGFQSSNYPANY 1121
Query: 132 HWKKF-----------SSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQ-TGELLLTG 176
H K+ SS+ +V ATD D K+ Y +A ++ + V TG + G
Sbjct: 1122 HLAKYVTTISEDVAPDSSVMTVRATDPDQGENGKITYAIAEETSWLFRVDNLTGVITTAG 1181
Query: 177 DPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
S D E Y V A D +Y + + ++ N + D + ++ P
Sbjct: 1182 ---SLDRERQSSYTFLVVAMD---SGKYDAKNTSIPVEINISDVNDNAPV-----FTKYP 1230
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWIT 286
R++ T + R+ + D G ++++ E E+ KF+I IT
Sbjct: 1231 FRMDVSTATLPGQNILRVSAHDADEGANGEVLYSFLHEVEKPKFRIHPTTGMIT 1284
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D E ++Y++ + A+D GI++ T +TV V D NDN+P F Q Y ++ + SL
Sbjct: 1644 LDAETRSEYTVQVIASD--GIHETMTDLTVRVTDLNDNTPRFEQAAYVAVLSEGPDSLQ- 1700
Query: 129 NVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELLL--TGDPPSDD 182
I +V+ATD D ++ Y L P + P TG L + T P
Sbjct: 1701 ---------EILTVNATDDDLTEENSRIRYYLLRPVKGFSVHPVTGVLTVNRTAIPRPLP 1751
Query: 183 VEYELTVEAHDLQSP 197
E +L + A D P
Sbjct: 1752 KELDLVIVAEDYGMP 1766
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
+ + KSG++ D E+ +Y+ + ATD+ G A V V++ ++ P F++K
Sbjct: 2052 AVDDKSGIV-TARAVFDYEQRNRYAFTLRATDMGG-RTAAVRVRVEIESRDEFYPQFTEK 2109
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTG 170
YRF++ ++ +L V IG V+ATD D +V Y+L + + TG
Sbjct: 2110 TYRFVIRNIAQALPGTV--------IGHVTATDRDKGPDGRVVYQLISQHPYIKLNRTTG 2161
Query: 171 ELLL 174
L++
Sbjct: 2162 ALIV 2165
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 19/143 (13%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+ G +DRE+VA+YS+ I A K ++ T + V V+DENDNSP F
Sbjct: 936 LVTLRGSLDREKVARYSVSILARSSKLLDI--TTLEVIVIDENDNSPEFRP--------- 984
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL---VVIVPQTGELLLT 175
S V ++ I +V+A+D D +++Y + + N+ + P +G L +
Sbjct: 985 -NSCYTLAVPENQEIFGIHTVAASDLDEGNNGEISYSI-IGGNIGSKFTLEPSSGMLSMF 1042
Query: 176 GDPPSDDVEYELTVEAHDLQSPS 198
+Y LT+ A D PS
Sbjct: 1043 SLDRETISKYVLTISAKDKGRPS 1065
>gi|260785219|ref|XP_002587660.1| hypothetical protein BRAFLDRAFT_96501 [Branchiostoma floridae]
gi|229272810|gb|EEN43671.1| hypothetical protein BRAFLDRAFT_96501 [Branchiostoma floridae]
Length = 1694
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 116/261 (44%), Gaps = 40/261 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YS+ G+ F + +PTT E++ VTSG +DRE Y L I+A D
Sbjct: 631 IVYSLEDGDGFFLFNI-HPTTGELK-----------VTSGHLDRETTETYELTISARDRG 678
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
++ T +T+ +LD NDN+P+FSQ VY+F S+ +V ++I ++SATD
Sbjct: 679 SPSQTVTQSMTITILDCNDNAPIFSQNVYKF-------SVREDVGVG---TTIAAISATD 728
Query: 147 AD----GDKVAYKLAVPSNLVVIVPQTGELLL--TGDPPSDDVEYELTVEAHDLQSPSRY 200
AD V Y + + TG +++ T D +E VEA D +P
Sbjct: 729 ADVTIQNSDVRYTIVNGRGTFYVDSTTGAVVVNDTLDYEEGQTYFEFEVEAEDTGNPVLT 788
Query: 201 AREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEME 260
+ + LQ N D + + +++ K + V+ S+ D
Sbjct: 789 GK---RSILQINVLDANDNRPIISVNQNYSLLTTAPKGSIVTVVQA------SDLDSGDN 839
Query: 261 GRIVFALEKETEREKFKIRDE 281
G++ FA++ ++ F I +E
Sbjct: 840 GKVTFAIDP--PQDSFIIDEE 858
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 76/179 (42%), Gaps = 25/179 (13%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I D FA+ NP T EI S+ S+ DRE QYS ITATD
Sbjct: 522 VTYGIHSSQDGGMFAI-NPQTAEIYVSSGSE----------FDRESKDQYSFTITATDRD 570
Query: 88 GINKAETHVT---VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
G + T + + D NDN+P+ L NV+ +++ + A
Sbjct: 571 GGIGSFTGTASITIIIDDINDNAPIIHSTQNHI-------DLYENVTRGHLITTLSATDA 623
Query: 145 TDADGDKVAYKLAVPSNLVV--IVPQTGELLLT-GDPPSDDVE-YELTVEAHDLQSPSR 199
+ ++ Y L + I P TGEL +T G + E YELT+ A D SPS+
Sbjct: 624 DEGANAEIVYSLEDGDGFFLFNIHPTTGELKVTSGHLDRETTETYELTISARDRGSPSQ 682
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 16/107 (14%)
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKV 152
VT+DV D NDN+PVFS + Y VG + N+ + F + G ATDAD V
Sbjct: 469 VTIDVTDTNDNTPVFSAQSY---VGHIAE--NATADDFVIFRNQGP-EATDADFGCNGTV 522
Query: 153 AYKL--AVPSNLVVIVPQTGELLLTG----DPPSDDVEYELTVEAHD 193
Y + + + I PQT E+ ++ D S D +Y T+ A D
Sbjct: 523 TYGIHSSQDGGMFAINPQTAEIYVSSGSEFDRESKD-QYSFTITATD 568
>gi|390354063|ref|XP_003728252.1| PREDICTED: protocadherin Fat 1-like [Strongylocentrotus purpuratus]
Length = 1207
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 45/217 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT+GND F + S SG++ T+ +D EEV Y+L + AT++
Sbjct: 505 VYYEITRGNDARRFDIN------------SNSGII-TTTMPLDYEEVTMYNLTVQATNMV 551
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G+ + T + + V D NDN+P FS Y VG + S + + S +SA DA
Sbjct: 552 GL-RTNTCLVIHVQDANDNAPTFSSVEY---VGSISESASLKSVVLDENSRPLVISAEDA 607
Query: 148 DGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDV------------EYELTVEAHDLQ 195
D A+ + I+ + ++ + D + + E+E TV+ HD
Sbjct: 608 DSGHNAHLV------YEIIERDAQMYFSIDESTGAIRTKMSLDHERIPEFEFTVQVHDTG 661
Query: 196 SPSRYAREPAQVWL----------QFNSPVLQDEQLL 222
SP A +PA+V + QF V + + LL
Sbjct: 662 SPQMMANKPARVRITIIDINDSQPQFVKAVFEAQLLL 698
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 26/130 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
VRY+I GN++ F + + + G +L+ + +D E + Y L I+A+D
Sbjct: 197 VRYAIVDGNEDGAFFI------------DPQGGFILI-AQPLDSETKSSYDLTISASD-- 241
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G N+A T + + V D NDN P+ Q++Y D+ + N + I + ATD
Sbjct: 242 GFNEATTMIRILVTDVNDNPPILEQELYEI---DIPENTRVN-------TPILQIMATDR 291
Query: 148 DG-DKVAYKL 156
D D++ + L
Sbjct: 292 DATDRLVFTL 301
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 43/85 (50%), Gaps = 4/85 (4%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK-AET 94
N+ TF + NP+ S + SG++ T DREE Y +V+ A D + + A
Sbjct: 817 NEPLTFTILNPSP---MFSIKPTSGIVRNTGIPFDREEQDSYHIVVEARDRRTPPRVAHI 873
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIV 119
V V++LD NDN P+F Y IV
Sbjct: 874 IVNVEILDINDNPPIFIHHQYNAIV 898
>gi|363729524|ref|XP_417264.3| PREDICTED: protocadherin-16 [Gallus gallus]
Length = 3258
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 85/172 (49%), Gaps = 28/172 (16%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+ G + +G +D E+ + YSL + A+D + ++ E ++TV V D NDN+P FSQ Y+
Sbjct: 2285 RYGGRIALTGPLDYEQRSHYSLTLRASDTR--HETEANLTVIVEDMNDNAPAFSQPFYQV 2342
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELL 173
+ + H S + ++SATD D GD + + LAVPS V I P G L
Sbjct: 2343 TLPE----------HTPAGSILLTMSATDMDSGSNGD-ITFHLAVPSLDVAIDPSNGT-L 2390
Query: 174 LTGDPPSDDVE---YELTVEAHDLQSPSRYAREPAQVWLQF-----NSPVLQ 217
T P D EL VEA D SPS + A V LQ +SP+ Q
Sbjct: 2391 FTIRPVEFDANQPTLELVVEARDRGSPSLSSW--ATVQLQVLDVNDHSPIFQ 2440
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 13/91 (14%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P V YSI+ G+ + F +I ST + L + +DRE A ++LV+ A
Sbjct: 2586 PRGHVHYSISSGDQHGLF--------QIHESTGA-----LCLARPLDRETQASHALVVQA 2632
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKV 114
TDV G + A V ++V D NDN P F +V
Sbjct: 2633 TDVPGGHFALVPVAIEVKDVNDNKPYFPVEV 2663
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 16/94 (17%)
Query: 60 GVL---LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDV--LDENDNSPVFSQKV 114
GVL LV S +DRE + YSLV+ A D G + +T+DV D NDN+P F+Q
Sbjct: 177 GVLYLDLVVSNVLDRENRSSYSLVLEAYD-GGTPPRSSQMTLDVSIQDINDNAPAFNQSR 235
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
Y ++ + + K SSI V A+DAD
Sbjct: 236 YHTLISE----------NLKPGSSILQVFASDAD 259
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
SGVL T+ +DRE+VA YSL + D ++ T V V VLD NDN+P F+Q Y
Sbjct: 1767 SGVL-STARALDREQVAFYSLTVVVQDHGTPPRSATMTVNVRVLDLNDNAPGFAQASY 1823
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 69/155 (44%), Gaps = 29/155 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YS+ GN + F L NP+T G L V ++REEV Q++L + A D
Sbjct: 1542 VSYSLRAGNGDGRFHL-NPST-----------GALSVVRA-LNREEVVQHNLTVVAADHG 1588
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
++ T + ++ VLD ND +P F + Y V + + S + V ATD
Sbjct: 1589 FPRRSATQLLSILVLDVNDEAPTFEKPEYEAHV----------MENLPAGSPVLQVLATD 1638
Query: 147 AD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDP 178
D +V Y + I PQTG L++T P
Sbjct: 1639 RDLGANGQVTYG-GLSGGPFSIHPQTG-LIVTTHP 1671
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYR 116
+DREE Y L +TATD G +AE+ + V+D NDN P+F Q+ Y+
Sbjct: 406 LDREERDSYDLRVTATD-SGTPPLRAESTFVLQVIDINDNPPLFDQQEYK 454
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 20/148 (13%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
L+VT+ +DREE Q+ L++ A D G+ N ++ V + V DEND++P +
Sbjct: 1665 LIVTTHPLDREEQEQHVLMVYAQD-GGLPPNLSKATVRITVGDENDHTPQLESE------ 1717
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA--VPSNLVVIVPQTGELLL 174
S + V + ++ ++ ATD DGD ++ Y++A P ++ P +G L
Sbjct: 1718 -----SCSVEVPENQSRVALYTLRATDPDGDENGRLEYRVADGDPEQDFILDPVSGVLST 1772
Query: 175 TGDPPSDDVE-YELTVEAHDLQSPSRYA 201
+ V Y LTV D +P R A
Sbjct: 1773 ARALDREQVAFYSLTVVVQDHGTPPRSA 1800
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 57/125 (45%), Gaps = 20/125 (16%)
Query: 57 SKSGVLLVTSGDIDREEVAQYSLVITATDVKGI------NKAETHVTVDVLDENDNSPVF 110
S+SG L V S +DRE Y L + A+ + V + + DENDNSP
Sbjct: 1025 SESGWLYVKSA-LDRETRDLYVLTVLASAGGSGSGGEARKTGTSTVRISITDENDNSPRL 1083
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVP 167
S++ Y F V + + SS+G V A+D D ++ Y+L + +I
Sbjct: 1084 SEERYFFTVPE----------NQAPGSSVGRVMASDRDAGQNSRLTYRLLQHDSNFLIHT 1133
Query: 168 QTGEL 172
QTGEL
Sbjct: 1134 QTGEL 1138
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 78/188 (41%), Gaps = 42/188 (22%)
Query: 22 KHPHQLVRYSITQGNDNHT--FALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSL 79
+ P+ V+YSI +D H+ FA+ +P T ++ T+ +D E+ Q L
Sbjct: 477 QGPNGEVQYSIVHSHDTHSSWFAI-DPATG------------IITTAAPLDYEKDPQPQL 523
Query: 80 VITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFS 137
+ ATD +G + V V + D NDN PVF Y SL N F
Sbjct: 524 TVLATD-RGTPALSSSAVVLVALQDVNDNEPVFRSNFYNV-------SLKENTPVGTCFL 575
Query: 138 SIGSVSATDADG---DKVAYKLAVPSNLVVIVP-------QTGELLLTGDPPSDD--VEY 185
V+ATDAD ++Y L S + +VP TG L T D+ Y
Sbjct: 576 ---QVTATDADSGLFGSLSYSLG--SGIGSVVPTQFSIDKHTGHLCTTQPLDRDEGTSAY 630
Query: 186 ELTVEAHD 193
+ T+ A D
Sbjct: 631 DFTITAVD 638
>gi|195114028|ref|XP_002001569.1| GI16125 [Drosophila mojavensis]
gi|193912144|gb|EDW11011.1| GI16125 [Drosophila mojavensis]
Length = 5013
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 66/122 (54%), Gaps = 17/122 (13%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
+S+SG + V +G+IDRE+ +Y L + A+D G +AET VT+ + D+NDN+P F Y
Sbjct: 2813 DSQSGNITV-AGEIDREQQDEYILKVIASD--GAWRAETPVTITIQDQNDNAPEFEHSFY 2869
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGE 171
F +L+ H F +G V ATD D ++Y L PS + + P TGE
Sbjct: 2870 SFNFPELQ--------HAVAF--VGQVIATDRDKRGPNSVISYSLQSPSPIFSVDPATGE 2919
Query: 172 LL 173
+
Sbjct: 2920 IF 2921
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 128/295 (43%), Gaps = 58/295 (19%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFAL-KNPTTHEIRNSTESKSG 60
EN+ +GT V + ++ S P+ I GN+ + F L K P H +R
Sbjct: 282 ENAVNGTVVAAVSVI--DSDDGPNGETSTRIVSGNELNHFRLEKTPLFHIVR-------- 331
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+G +DREE+++Y+L + ATD KG K+ H+ ++V D ND+ PVF + Y +
Sbjct: 332 ----VNGVLDREEISKYNLTVVATD-KGTPERKSIAHLIINVNDVNDHEPVFEKSEYSAV 386
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVI-VPQTGELLL 174
+ +L + + + S++ATD D +V Y++ + L + T L++
Sbjct: 387 LSELAPT----------GTFVASIAATDEDTGVNAQVYYEILTGNELKWFNIDTTTGLVV 436
Query: 175 TGDPPSDDVE--YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
T P +++ EL++ A D ++A +V + +D EAP
Sbjct: 437 TAGPLDREMQASVELSISARDGGPNPKFAYTQLKVTI---------------LDENDEAP 481
Query: 233 H----RIEKRRVTRAVRPTKRIDFSETDGEM--EGRIVFALEKETER---EKFKI 278
+ +I PT S TD + G + F+L ER ++F I
Sbjct: 482 NFGQQQINVSLSEDVAPPTLVTLLSATDNDQGTNGSVTFSLAPSVERLYPQQFAI 536
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 18/136 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE Y++ I D G+ ET V V V D NDN P+F + VY F + +
Sbjct: 1728 LDRETKDVYNMRIRVND--GVQYTETDVIVQVDDTNDNPPIFEETVYSFDIPE------- 1778
Query: 129 NVSHWKKFSSIGSVSATDAD---GDKVAYKLAV--PSNLVVIVPQTGELLLTGDPPSDDV 183
+ + +G + A DAD +V+Y + +++ + PQTG L LT ++V
Sbjct: 1779 ---NAPRGYQVGEILAKDADLAQNAQVSYAVVSDWANDVFSLNPQTGALTLTAKLDYEEV 1835
Query: 184 E-YELTVEAHDLQSPS 198
+ Y L V+A D PS
Sbjct: 1836 QHYILIVQAQDNGQPS 1851
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 12/157 (7%)
Query: 63 LVTSGDIDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
L+T +DRE +A Y + + A D A V ++VLD NDN+P F K Y F V
Sbjct: 543 LMTRKALDRETMANYEIFVIARDQGAPAPQSATATVYLNVLDINDNNPEFYPKHYIFTVK 602
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDA-DGDK--VAYKL-AVPSNLVVIVPQTGELLLTG 176
D +++V+H + +V+ATD DGD + Y L + N+ + +TG + T
Sbjct: 603 D----QDTDVAHKNSMQVLLNVTATDRDDGDNALITYNLESGGENVFQLDSRTGAITFTA 658
Query: 177 DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNS 213
Y L + A D S R+ + A V + S
Sbjct: 659 SGEMKKAYYRLRISARD--SGERHTKHDAIVEIILES 693
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 30/120 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
V YS+ GN+ + F+L +S +G LL + +DRE + LV+ A D
Sbjct: 1144 VYYSLAAGNEANLFSL------------DSATG-LLTLAHRLDRESQEIHRLVVVAKDAA 1190
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQ---------------KVYRFIVGDLKSSLNSNV 130
+K K+ ++T+ VLD+NDN+P F+Q ++ RF D +NS V
Sbjct: 1191 LKNPLKSTANITITVLDDNDNAPEFTQSSSEISVLETSPSGTELMRFRASDADQGVNSQV 1250
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 19/145 (13%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN ++ F L T N + S + L T+G++DRE Y L I+A+D
Sbjct: 72 YEIIAGNVDNKFRLVTTT-----NPSGDTSYLHLETTGNLDRESRGSYQLNISASDGGTP 126
Query: 90 NK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ V V +LD NDN P+F D +LN V S + V A+D D
Sbjct: 127 PRLGFLQVNVTILDVNDNPPIFDHS-------DYSVTLNETVLPG---SPVLQVMASDND 176
Query: 149 -GD--KVAYKLAVPSNLVVIVPQTG 170
GD K+ Y L+ + P+TG
Sbjct: 177 LGDNSKLTYYLSETETQFTVDPETG 201
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFI 118
G+L V + +DRE Y L ITA D A ++ +T+ +LDENDN PVF K Y
Sbjct: 2077 GILRV-ADTLDREIRVNYVLNITARDRGDPPLATQSQLTIKILDENDNIPVFDPKQYSAS 2135
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GD--KVAYKL 156
V + N+++ + + VSATD D GD +V Y +
Sbjct: 2136 VAE-----NASIG-----AMVLQVSATDMDEGDNGRVRYSI 2166
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
VRY + +GN N +T EI VLL +DRE+ ++Y L + A D
Sbjct: 2271 VRYFLKEGNATKDLFRINASTGEI---------VLLTP---LDREQQSEYILTLVAMDTG 2318
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V V+V D NDN PVF + Y V
Sbjct: 2319 SPPLSNTGIVKVEVQDINDNGPVFELQYYHATV 2351
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 44/90 (48%), Gaps = 16/90 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y++ N F+L NP T G L +T+ +D EEV Y L++ A D
Sbjct: 1802 VSYAVVSDWANDVFSL-NPQT-----------GALTLTA-KLDYEEVQHYILIVQAQD-N 1847
Query: 88 GINKAETHVTV--DVLDENDNSPVFSQKVY 115
G T +TV +VLD NDN+P+F Y
Sbjct: 1848 GQPSLSTTITVYCNVLDLNDNTPLFDPMSY 1877
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 37/197 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+ T+ +DREE++ Y+LV+ A D +G+ + V + +LD+NDN P F+ ++Y V
Sbjct: 2716 IYTTMQLDREEMSDYALVVEAVD-QGVPQLTGTASVLLHLLDKNDNPPKFT-RLYSLNVT 2773
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL-AVPSNLVVIVPQTGELLLTG 176
+ N+++ + + V+++D D Y A P N + Q+G + + G
Sbjct: 2774 E-----NADIGTF-----VICVTSSDLDLGENANATYTFSANPGNKFKLDSQSGNITVAG 2823
Query: 177 --DPPSDDVEYELTVEAHD------------LQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
D D EY L V A D +Q + A E + FN P LQ
Sbjct: 2824 EIDREQQD-EYILKVIASDGAWRAETPVTITIQDQNDNAPEFEHSFYSFNFPELQHAVAF 2882
Query: 223 --QMI--DRKSEAPHRI 235
Q+I DR P+ +
Sbjct: 2883 VGQVIATDRDKRGPNSV 2899
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 28/132 (21%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
YSI GN +F + +++SG + T+ +DRE++A Y+LVI A D
Sbjct: 3435 YSIINGNLKQSFKI------------DAESGEI-TTAALLDREDIAHYNLVIGAIDTGLP 3481
Query: 90 NKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ T V +++ D NDN P F+ + ++G + + + +SI +++ATD D
Sbjct: 3482 PQTGTATVRINLDDINDNGPTFTSE---GLIGYIPENEPAG-------TSIMTLTATDPD 3531
Query: 149 ----GDKVAYKL 156
G +YK+
Sbjct: 3532 LPENGPPFSYKI 3543
Score = 37.4 bits (85), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 21/172 (12%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV- 86
++Y I GN + A+ +P SGVL V +D E QY + + A D
Sbjct: 2590 IKYKIAGGNMGNA-AVVDP-----------NSGVLSVGPDGLDYELTHQYEIWVAAADSD 2637
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+ + T + ++V D NDN PV + +Y V + +S + +I ++
Sbjct: 2638 RPSLRTVTLLNINVTDANDNPPVMEKLIYNAEVLEEESP-------PQFIVAIKAIDKDS 2690
Query: 147 ADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSP 197
D +V+Y L N + + +GE+ T +++ +Y L VEA D P
Sbjct: 2691 GDNGEVSYLLKNDYNGIFEINSSGEIYTTMQLDREEMSDYALVVEAVDQGVP 2742
>gi|395736274|ref|XP_003780447.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-6 [Pongo abelii]
Length = 769
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 90/186 (48%), Gaps = 30/186 (16%)
Query: 30 YSITQGNDNHT----FALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
+S++ + H +++N +R S E+ LVT G +DRE A+Y++ IT TD
Sbjct: 341 FSVSDADSGHNQQVICSIENNLPFLLRPSVENF--YTLVTEGALDRESRAKYNITITVTD 398
Query: 86 VKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
+ GI + +T +TV V D NDN+P F+Q Y V + NS V H IGSVS
Sbjct: 399 L-GIPRLKTQQSITVQVSDVNDNAPSFTQTSYTLFVRE----NNSPVLH------IGSVS 447
Query: 144 ATDADGD---KVAYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAH 192
ATD D +V Y L P ++LV I G L + ++ +E V A
Sbjct: 448 ATDGDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGAT 507
Query: 193 DLQSPS 198
D SP+
Sbjct: 508 DRGSPA 513
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 65/135 (48%), Gaps = 25/135 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
L RY+I+ NP H + RN +E + L+ +DREE Q L +TA D
Sbjct: 166 LQRYTIS----------SNPHFHVLTRNRSEGRKFPELMLDKSLDREEQPQLRLTLTALD 215
Query: 86 VKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
++ + + + VLD NDN P F+Q++Y V + N+++ S + +VSA
Sbjct: 216 GGSPPRSGSSEIQIQVLDINDNIPEFAQELYEAQVPE-----NNHLG-----SPVITVSA 265
Query: 145 TDADG---DKVAYKL 156
D D KV+Y L
Sbjct: 266 RDLDAGSFGKVSYAL 280
>gi|380028708|ref|XP_003698032.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
suppressor-like [Apis florea]
Length = 4483
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 109/258 (42%), Gaps = 49/258 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+ +G +DREE +Y L + A D G +A T +T+ + D+NDN P F ++ Y F +L
Sbjct: 2326 VTVNGHLDREEQDEYLLKLVAAD--GAWQAATALTITIQDQNDNPPEFDEESYHFHFPEL 2383
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELLL---- 174
+ S V+H +G V+A D D ++Y L PS+L + P TG++
Sbjct: 2384 QPS----VAH------VGQVTAIDRDKQGPNSVISYSLLQPSDLFTVDPATGDVFSKKTL 2433
Query: 175 ----TGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSE 230
T P S + Y LTV A D P ++ V ++D +
Sbjct: 2434 KYKHTHRPSSPENLYSLTVVATDNGKPPLSSKTSIHV---------------NVVDANNN 2478
Query: 231 APHRIEKRRVTRAV--------RPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDEN 282
AP R E+R V R + + + D + I + L E F I +++
Sbjct: 2479 AP-RFEQRSYLYPVPENYGVGKRVVQLVARDDADFGVNAEISYFLVNVNGSEYFSIDEKS 2537
Query: 283 PWITVDEN-GDVRVKKRW 299
W+ + +VRV +
Sbjct: 2538 GWVYIQNALANVRVGTTF 2555
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 124/311 (39%), Gaps = 56/311 (18%)
Query: 3 NSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL 62
N + G + L + + + + V YS+ GN FA+ E+ +
Sbjct: 1231 NEGAAIGTQLLRVYTTDADEGLNGDVFYSLEDGNQYGRFAID-----------EATGQIS 1279
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
L+ ++DRE + Y L + A D+ + + + + V D NDN+P F Y F V +
Sbjct: 1280 LMK--ELDRETMDTYVLTVVAHDL--LTHRDIILNIQVTDTNDNAPTFQNTAYSFDVPE- 1334
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDADGD----KVAYKLAV--PSNLVVIVPQTGELLLTG 176
+ + S IG V ATDAD D +++Y L +++ + P TG LT
Sbjct: 1335 ---------NMPRGSRIGQVVATDADADGPNSQLSYTLISDWANDVFSLNPSTGVFTLTA 1385
Query: 177 DPPSDDVE-YELTVEAHDLQSPSRYAREPAQ---VWLQFNSPVLQDEQLLQMIDRKSEAP 232
+ V+ Y L V+A D P+ + V L N+P+ + P
Sbjct: 1386 SLDYEQVQHYILVVQATDGGIPALSSTVTVYCNVVDLNDNAPIFE------------AGP 1433
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGD 292
H ++ T P + + D GR+++A+ DEN V NG
Sbjct: 1434 HAVDIVENTTIGTPILSVTAQDLDSGDNGRVIYAVAGG---------DENGDFGVAPNGT 1484
Query: 293 VRVKKRWDFEE 303
+ +K D E+
Sbjct: 1485 LFTRKLLDREQ 1495
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 27/130 (20%)
Query: 32 ITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI-- 89
I GN+ F L+ T ++ + +G +DREE+ +Y+L + ATD KG
Sbjct: 437 IRAGNELGHFRLQTAATFDV-----------VRVNGGLDREEIPKYNLTVVATD-KGTPP 484
Query: 90 NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
A ++ + V D ND+ PVF Q Y S++ S +S F + S+SATDAD
Sbjct: 485 RSATAYLVIHVNDVNDHEPVFQQSEY--------SAVLSELSPIGSF--VASISATDADS 534
Query: 150 D---KVAYKL 156
++ Y+L
Sbjct: 535 GLNARIYYEL 544
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 32/181 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVI----TA 83
VRY I G+DN F + S+ G ++ + +++ E ++Y L I A
Sbjct: 1673 VRYGIAMGDDNRDFTI-------------SEDGGVIRVAKNLNFERKSRYYLTIRGEDCA 1719
Query: 84 TDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
++V + +T VT+ VLD NDN+PVF Y L + + V F + V
Sbjct: 1720 SEVGETPRGDTAQVTITVLDINDNAPVFLDSPY------LAHVMENMVPPGGGF--VIQV 1771
Query: 143 SATDAD----GDKVAYKLA-VPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQS 196
A DAD D+V Y L ++L I TG++ L + V EY LT+ A D S
Sbjct: 1772 KAYDADTPPYNDQVRYFLKEGDTDLFRINASTGDIFLLRPLDRELVPEYTLTLVAMDTGS 1831
Query: 197 P 197
P
Sbjct: 1832 P 1832
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 59/142 (41%), Gaps = 13/142 (9%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN + F L+ N T + + L T+G +DRE+V YSL + A D
Sbjct: 201 YFIVDGNTDGKFRLE-----VTGNPTGETTYLHLETTGKLDREQVEFYSLNVCARDRGQP 255
Query: 90 NK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ V V VLD NDN P+F Q D +LN + K ++ + D
Sbjct: 256 PRLGYLLVNVTVLDVNDNPPIFQQS-------DYVVALNESAPIGTKVLTVRATDKDSED 308
Query: 149 GDKVAYKLAVPSNLVVIVPQTG 170
K+ Y L I P TG
Sbjct: 309 NSKLTYYLPDTERQFTIDPDTG 330
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 14/93 (15%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ ++RY I+ GN+ + F + H I +G + + +D + V +Y L ITA
Sbjct: 2620 PNGMIRYKISAGNEKNEFFV-----HSI-------TGAVTILE-PLDYDLVQEYKLNITA 2666
Query: 84 TDVK-GINKAETHVTVDVLDENDNSPVFSQKVY 115
TD+ +A +TV+V D NDN P F+Q VY
Sbjct: 2667 TDLGFEAKQAVAILTVNVSDINDNPPTFNQSVY 2699
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 105/261 (40%), Gaps = 46/261 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y + GN+ FA+ T L+ T +DRE L ++A D
Sbjct: 540 IYYELDSGNEQGWFAIDQDTG-------------LVTTIATLDREVQGSIELHVSARDGG 586
Query: 88 GINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
K A TH+ V +LDEND +P FSQ V ++ +L+ N +++ +V
Sbjct: 587 PSPKYASTHLKVTILDENDEAPRFSQNV-------VQVTLSENTPPQSLVATLTAVDNDQ 639
Query: 147 ADGDKVAYKL--AVPSNLVVIVPQTGEL-LLTGDPPSD-------DVEYELTVEAHDLQS 196
VAY +VP + P+T L LTG + EY + V A D +
Sbjct: 640 GTNGSVAYSFHSSVPRDY----PKTFALDGLTGQLTTKVHLDRETIAEYRILVIAKDQGT 695
Query: 197 PSRYAREPAQVWLQF-----NSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA-VRPTKRI 250
P + + A V L NSPV + L + + + K T A R ++
Sbjct: 696 PPQSST--ATVILTLKDVNDNSPVFYPWRYLMAVPEDAPPGTSVGKVMATDADARENAQV 753
Query: 251 DFSETDGEMEGRIVFALEKET 271
+S G G +FA+++ T
Sbjct: 754 RYSLESG---GEGLFAVDERT 771
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 40/83 (48%), Gaps = 15/83 (18%)
Query: 65 TSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQK---------- 113
T+ +DREE+A Y L++ A D + T V V VLD+NDN P F++
Sbjct: 2225 TNAKLDREEIASYELIVEARDEGQPSLTGTATVLVTVLDKNDNPPQFTRLFSVNVTENAE 2284
Query: 114 ----VYRFIVGDLKSSLNSNVSH 132
V R DL N+NVS+
Sbjct: 2285 IGTFVIRITSSDLDIGQNANVSY 2307
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 56/102 (54%), Gaps = 16/102 (15%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
LL SG +DRE + Y+L +TA D +G + T VTV VLD+NDNSPVF + Y V
Sbjct: 1589 LLRVSGSLDRELRSNYTLEVTAKD-RGEPPRSSSTTVTVTVLDKNDNSPVFDPRQYSATV 1647
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV 158
+ N+++ +S+ VSA D D +V Y +A+
Sbjct: 1648 AE-----NASIG-----ASVLQVSAMDRDEGANGRVRYGIAM 1679
>gi|397517685|ref|XP_003829037.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Pan paniscus]
Length = 4349
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G PIL+ S+ V Y + +GN + F++ S SG L+ T ++D
Sbjct: 1676 GSPILLVSAMSSSE--VTYELREGNKDGVFSMN------------SYSG-LISTQKNLDH 1720
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E+++ Y L I +++ G + V VD++DENDN+P+F + + VG + +
Sbjct: 1721 EKISSYQLKIRGSNMAGA-FTDVMVVVDIIDENDNAPMFFKSTF---VGQISEAAPLYSM 1776
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EY 185
K ++ + A+D+D + + YK+ P L I P G L + + + + +
Sbjct: 1777 IMDKNNNPFVIHASDSDKEANSLLVYKILEPEALKFFKIDPSMGTLTIVSEMDYESMPSF 1836
Query: 186 ELTVEAHDLQSPSRYAREPAQVWLQF----NSPVLQDEQLLQM 224
+ V HD SP +A PAQV + +SP EQ+ ++
Sbjct: 1837 QFCVYVHDQGSPILFAPRPAQVIIHVRDVNDSPPRFSEQIYEV 1879
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLV 80
P VRY I G+ + F + +R T+S + LL +RE Y+L+
Sbjct: 65 PQWAVRYRIISGDVANVFKTEEYVVGNFCFLRIRTKSSNTALL------NREVRDSYTLI 118
Query: 81 ITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD---LKSSLNSNVSHWKKFS 137
I AT+ +A T V V +LD+ND P+FS YR + + LK S
Sbjct: 119 IQATEKTLELEALTRVVVHILDQNDLKPLFSPPSYRVTISEDMPLK-------------S 165
Query: 138 SIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTG 176
I V+ATDAD + A Y S + I P +G + + G
Sbjct: 166 PICKVTATDADLGQNAEFYYAFNTRSEMFAIHPTSGVVTVAG 207
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 79/178 (44%), Gaps = 32/178 (17%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS+ G V L L A + Q+ Y IT+G+ F + E R S+
Sbjct: 2916 VENSEPGELVATLKTLDADISEQNRQVTCY-ITEGDPLGQFGISQ-VGDEWRISSRKT-- 2971
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+DRE A+Y L +TA+D G +A V + VLD NDNSP SQ +Y V
Sbjct: 2972 --------LDREHTAKYLLRVTASD--GKFQASVTVEIFVLDVNDNSPQCSQLLYTGKV- 3020
Query: 121 DLKSSLNSNVSHWKKFSS--IGSVSATDADGD---KVAYKLAVP-SNLVVIVPQTGEL 172
H F I VSATD D D ++ Y L P ++ + P TGEL
Sbjct: 3021 -----------HEDVFPGHFILKVSATDLDTDTNAQITYSLHGPGAHEFKLDPHTGEL 3067
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 28/169 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN+ F + E ++G LL + +D E Y L +T D+
Sbjct: 752 YVIADGNEEGCFDI------------ELETG-LLTVAAPLDYEATNFYILNVTVYDLGTP 798
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K+ +TV+V D NDN+P F Y+ + + ++ V ++I ++ DAD
Sbjct: 799 QKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE-----DTEVG-----TTIAELTTKDAD 848
Query: 149 GD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSD-DVEYELTVEAHD 193
+ +V Y L P+ + P TGEL++TG + + Y L VEA D
Sbjct: 849 SEDNGRVRYTLLSPTEKFSLHPLTGELVVTGHLDRESEPRYILKVEARD 897
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 31/123 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ ++IT GN + F + +P T LL T+ +DRE ++ L +T D
Sbjct: 1172 LTFNITSGN-HMGFFMIHPVTG------------LLSTAQQLDRENKEEHILEVTVLDNG 1218
Query: 88 GIN-KAETHVTVDVLDENDNSPVFSQK-----------------VYRFIVGDLKSSLNSN 129
+ K+ + V V +LD NDN PVFS K VYR + DL LN
Sbjct: 1219 EPSLKSTSRVVVGILDVNDNPPVFSHKLFNVRLPERLSPVSPGPVYRLVASDLDEGLNGR 1278
Query: 130 VSH 132
V++
Sbjct: 1279 VTY 1281
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 33/205 (16%)
Query: 26 QLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
++V +T N + LK P++ +++G L+ T+ +D + A Y L I +
Sbjct: 380 RVVMVRVTPAFPNLQYVLK-PSSENAGFKLNAQTG-LITTTKLMDFHDRAHYQLHIRTSP 437
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+A T V +D++D N+++P+F++ Y +L+ N+ +S+ +V+AT
Sbjct: 438 ----GQASTMVVIDIVDCNNHAPLFNRSSY-------DGTLDENI---PPGTSVLAVTAT 483
Query: 146 DADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT-------VEAHDLQ 195
D D + V Y +A P L + ++ T P ++YEL V A D
Sbjct: 484 DRDHGENGYVTYSIAGPKALPFSIDPYLGIISTSKP----MDYELMKRIYTFRVRASDWG 539
Query: 196 SPSRYAREPAQVWLQFNSPVLQDEQ 220
SP R +E ++LQ + L D Q
Sbjct: 540 SPFRREKE-VSIFLQLRN--LNDNQ 561
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
+T+ K+GVL VT G +D E ++ + ATD + +E V V V D NDN P FSQ
Sbjct: 2217 TTDFKTGVLTVT-GPLDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQL 2275
Query: 114 VY 115
VY
Sbjct: 2276 VY 2277
>gi|426350687|ref|XP_004042901.1| PREDICTED: protocadherin Fat 2 [Gorilla gorilla gorilla]
Length = 4349
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G PIL+ S+ V Y + +GN + F++ S SG L+ T ++D
Sbjct: 1676 GSPILLVSAMSSSE--VTYELREGNKDGVFSMN------------SYSG-LISTQKNLDH 1720
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E+++ Y L I +++ G + V VD++DENDN+P+F + + VG + +
Sbjct: 1721 EKISSYQLKIRGSNMAGA-FTDVMVVVDIIDENDNAPMFLKSTF---VGQISEAAPLYSM 1776
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EY 185
K ++ + A+D+D + + YK+ P L I P G L + + + + +
Sbjct: 1777 IMDKNNNPFVIHASDSDKEANSLLVYKILEPEALKFFKIDPSMGTLTIVSEMDYESMPSF 1836
Query: 186 ELTVEAHDLQSPSRYAREPAQVWLQF----NSPVLQDEQLLQM 224
+ V HD SP +A PAQV + +SP EQ+ ++
Sbjct: 1837 QFCVYVHDQGSPILFAPRPAQVIIHVRDVNDSPPRFSEQIYEV 1879
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLV 80
P VRY I G+ + F + +R T+S + LL +RE Y+L+
Sbjct: 65 PQWAVRYRIISGDVANVFKTEEYVVGNFCFLRIRTKSSNTALL------NREVRDSYTLI 118
Query: 81 ITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD---LKSSLNSNVSHWKKFS 137
I AT+ +A T V V +LD+ND P+FS YR + + LK S
Sbjct: 119 IQATEKTLELEALTRVVVHILDQNDLKPLFSPPSYRVTISEDMPLK-------------S 165
Query: 138 SIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTG 176
I V+ATDAD + A Y S + I P +G + + G
Sbjct: 166 PICKVTATDADLGQNAEFYYAFNTRSEMFAIHPTSGVVTVAG 207
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 79/178 (44%), Gaps = 32/178 (17%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS+ G V L L A + Q+ Y IT+G+ F + E R S+
Sbjct: 2916 VENSEPGELVATLKTLDADISEQNRQVTCY-ITEGDALGQFGISQ-VGDEWRISSRKT-- 2971
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+DRE A+Y L +TA+D G +A V + VLD NDNSP SQ +Y V
Sbjct: 2972 --------LDREHTAKYLLRVTASD--GKFQASVTVEIFVLDVNDNSPQCSQLLYTGKV- 3020
Query: 121 DLKSSLNSNVSHWKKFSS--IGSVSATDADGD---KVAYKLAVP-SNLVVIVPQTGEL 172
H F I VSATD D D ++ Y L P ++ + P TGEL
Sbjct: 3021 -----------HEDVFPGHFILKVSATDLDTDTNAQITYSLHGPGAHEFKLDPHTGEL 3067
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 28/169 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN+ F + E ++G LL + +D E Y L +T D+
Sbjct: 752 YVIADGNEEGCFDI------------ELETG-LLTVAAPLDYEATNFYILNVTVYDLGTP 798
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K+ +TV+V D NDN+P F Y+ + + ++ V ++I ++ DAD
Sbjct: 799 QKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE-----DTEVG-----TTIAELTTKDAD 848
Query: 149 GD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSD-DVEYELTVEAHD 193
+ +V Y L P+ + P TGEL++TG + + +Y L VEA D
Sbjct: 849 SEDNGRVRYTLLSPTEKFSLHPLTGELVVTGHLDRESEPQYILKVEARD 897
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 33/205 (16%)
Query: 26 QLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
++V +T N + LK P++ + +++G L+ T+ +D + A Y L I +
Sbjct: 380 RVVMVRVTPAFPNLQYVLK-PSSENVGFKLNARTG-LITTTKLMDFHDRAHYQLHIRTSP 437
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+A T V +D++D N+++P+F++ Y +L+ N+ +S+ +V+AT
Sbjct: 438 ----GQASTMVVIDIVDCNNHAPLFNRSSY-------DGTLDENI---PPGTSVLAVTAT 483
Query: 146 DADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT-------VEAHDLQ 195
D D + V Y +A P L + ++ T P ++YEL V A D
Sbjct: 484 DRDHGENGYVTYSIAGPKALPFSIDPYLGIISTSKP----MDYELMKRIYTFRVRASDWG 539
Query: 196 SPSRYAREPAQVWLQFNSPVLQDEQ 220
SP R +E ++LQ + L D Q
Sbjct: 540 SPFRREKE-VSIFLQLRN--LNDNQ 561
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 31/123 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ ++IT GN + F + +P T LL T+ +DRE ++ L +T D
Sbjct: 1172 LTFNITSGN-HMGFFMIHPVTG------------LLSTAQQLDRENKDEHILEVTVLDNG 1218
Query: 88 GIN-KAETHVTVDVLDENDNSPVFSQK-----------------VYRFIVGDLKSSLNSN 129
+ K+ + V V +LD NDN P+FS K VYR + DL LN
Sbjct: 1219 EPSLKSTSRVVVGILDVNDNPPIFSHKLFNVRLPERLSPVSPGPVYRLVASDLDEGLNGR 1278
Query: 130 VSH 132
V++
Sbjct: 1279 VTY 1281
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
+T+ K+GVL VT G +D E ++ + ATD + +E V V V D NDN P FSQ
Sbjct: 2217 TTDFKTGVLTVT-GPLDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQL 2275
Query: 114 VY 115
VY
Sbjct: 2276 VY 2277
>gi|158297299|ref|XP_317558.4| AGAP007924-PA [Anopheles gambiae str. PEST]
gi|157015128|gb|EAA12848.4| AGAP007924-PA [Anopheles gambiae str. PEST]
Length = 5159
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 104/249 (41%), Gaps = 39/249 (15%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
S +S +G + V +G +DRE+ +Y L + A D G + ET +T+ + D+NDN+P F
Sbjct: 2895 SIDSTTGNVTV-AGHLDREQQDEYILKVAAVD--GAWRTETPLTITIQDQNDNAPEFEHS 2951
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQT 169
Y F +L+ K + +G V ATD D ++Y L PS+L I P T
Sbjct: 2952 YYSFNFRELQ----------KSVTFVGQVIATDRDKQGPNSVISYSLQQPSDLFTIDPAT 3001
Query: 170 GELLL--------TGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQD 218
GE+ T S + + LTV A D P Y + + N PV
Sbjct: 3002 GEIFSKRRIHYKHTQLEASPENSFTLTVLATDNGKPPMYTECLVNINVVDANNNPPVFSQ 3061
Query: 219 EQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKI 278
+ + ++ RI ++ T R E D + I + L ++F I
Sbjct: 3062 RAYMAPVPEGADVGLRI--------LQLTAR---DELDFGVNAEIEYQLIGGNGSDRFAI 3110
Query: 279 RDENPWITV 287
+ WI V
Sbjct: 3111 NKLDGWIVV 3119
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 116/284 (40%), Gaps = 55/284 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y++ G+ FAL E ++G LL +DRE Y L ++ TD
Sbjct: 1789 LEYALLDGDAPKKFAL------------ERETG-LLKLRDTLDRETEDSYRLKVSVTD-- 1833
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
GI ET +T+ + D NDN PVF++ Y F + + + ++ +G ++ATD
Sbjct: 1834 GIQSTETTITIQITDTNDNPPVFAEPAYSFDIPE----------NAQRGFHVGVIAATDP 1883
Query: 148 D-GDKVAYKLAVPS----NLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYA 201
D G A V S ++ + PQTG LT ++V+ Y L V+A D PS +
Sbjct: 1884 DVGTNAAVTYTVISDWANDVFSLNPQTGIFTLTARLDYEEVQHYILVVQAQDNGYPSLSS 1943
Query: 202 REPAQ---VWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGE 258
V L N+P+ D S + E + V D D
Sbjct: 1944 TLTVYCNVVDLNDNAPIF---------DPMSYSNEIFENAPINSDVVTVSATDI---DSG 1991
Query: 259 MEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
GRI +++ + E F+I NG +R ++ D E
Sbjct: 1992 SNGRIEYSITAGDDNEDFQIM---------SNGTIRTRRALDRE 2026
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 13/89 (14%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
LL SG +DRE Y L + A D +G ++ + ++VLDENDNSP+F K Y +
Sbjct: 2159 LLRVSGQLDREAKPSYELNVIAKD-RGDPPRMTQSRIRINVLDENDNSPIFDPKQYSAAI 2217
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ N+++ +S+ VSATD D
Sbjct: 2218 AE-----NASIG-----ASVLQVSATDID 2236
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 15/94 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I++GN FA+ + T + + +DRE A Y L + A D
Sbjct: 1250 VFYYISEGNRAERFAIDDSTGQ-------------ITLARALDRETTASYRLTVVAHDAS 1296
Query: 88 GINK--AETHVTVDVLDENDNSPVFSQKVYRFIV 119
++ A T VT++VLDEND++P F+Q + + +
Sbjct: 1297 KQHRLSASTTVTIEVLDENDDAPEFTQTLSQIAI 1330
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 24/119 (20%)
Query: 32 ITQGNDNHTFAL-KNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN 90
I GND F L K+P+ + +R +G +DREE+ +Y+L + A D
Sbjct: 379 IVAGNDLQHFRLEKSPSFYIVR------------VNGVLDREEIGKYNLTVVAIDRGAPP 426
Query: 91 KAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ T H+ + V D ND+ PVF + Y ++ +L + + S++ATD D
Sbjct: 427 RTATAHLIIHVNDVNDHEPVFEKSEYSAVLSELA----------PPGTYVASITATDED 475
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 67/154 (43%), Gaps = 28/154 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
++ Y+I G+ FA+ E+ +G++ + D EE QY+L + A +
Sbjct: 3307 IINYAIVGGSGRELFAI------------ETATGII-TSKATFDYEEQDQYTLTLAAYNP 3353
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+ ET V V V N+ P F Q V+ F V + + SS+G + ATD
Sbjct: 3354 DSSMRNETKVIVHVTGVNEYFPKFIQPVFHFDVSE----------SAEVGSSVGIIEATD 3403
Query: 147 ADG---DKVAYKLAVPSN--LVVIVPQTGELLLT 175
D KV Y L SN I P TG L+++
Sbjct: 3404 KDAGEDGKVYYLLVGSSNDKGFSIHPSTGVLVVS 3437
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 63/151 (41%), Gaps = 21/151 (13%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSG----VLLVTSGDIDREEVAQYSLVITATD 85
Y I +GN F L T S +G + L T+G +DRE Y+L I+A D
Sbjct: 146 YRIVEGNHEEKFRLA---------VTTSPNGDVYYLHLETTGKLDRESRGFYALNISARD 196
Query: 86 V-KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+ V V +LD NDN P+F Y IV SLN +V + + +
Sbjct: 197 GGEPARYGYLRVNVTILDVNDNPPIFDHSDY--IV-----SLNESVLPGTPVLQVMASDS 249
Query: 145 TDADGDKVAYKLAVPSNLVVIVPQTGELLLT 175
D K+ Y LA + P+TG + T
Sbjct: 250 DLGDNSKITYYLADAETQFTVDPETGVIATT 280
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 16/100 (16%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTH-EIRNSTESKSGVLLVTSGDIDREEVAQYSLVIT 82
P+ +VRY+I GN+ + F + + T IRN +D + + Y L IT
Sbjct: 3199 PNGMVRYAILAGNERNDFMVNSVTGAVSIRNP--------------LDYDLIQVYQLNIT 3244
Query: 83 ATDVK-GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
A D+ ++ VT+ + D NDN+P F+Q VY V +
Sbjct: 3245 AEDLGYKPKRSIAMVTITLTDINDNAPYFNQSVYDAYVAE 3284
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 36/52 (69%), Gaps = 3/52 (5%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQ 112
+ T+ +DRE++AQY+L++ A D +G+ + V V+VLD+NDN P F++
Sbjct: 2800 IYTTTRLDREDIAQYTLIVEAVD-QGVPQLTGSATVLVNVLDKNDNPPKFTR 2850
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 16/100 (16%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y+I +GN + F + G L V S +DREE Y+L I
Sbjct: 1019 PNGRISYAIVEGNVDGKFGI-------------FPDGYLFVRSA-LDREERDYYALTIAC 1064
Query: 84 TD-VKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
D + ++++ + V V V+DENDN+P F+ + F V +
Sbjct: 1065 ADEGRPVSRSSSVPVIVHVIDENDNAPQFTNGTFVFSVAE 1104
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 27/175 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV- 86
+RY+I GN + +P+T E+ V G +D E QY + I A D
Sbjct: 2674 IRYAIAGGNIGEALRI-DPSTGEV-----------AVNRGGLDYERHQQYEVWIEAADSD 2721
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+ ++ + V+V D NDN+PV + +Y + L+ S + + VSA+D
Sbjct: 2722 RPSLRSVLQLIVNVTDANDNAPVMDRPMY--VAEVLEEESPSQL--------VTKVSASD 2771
Query: 147 ADGD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSP 197
AD + ++ Y+L I TGE+ T +D+ +Y L VEA D P
Sbjct: 2772 ADSEENGQITYRLRDDFESFEINTDTGEIYTTTRLDREDIAQYTLIVEAVDQGVP 2826
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 58/135 (42%), Gaps = 23/135 (17%)
Query: 69 IDREEVAQYSLVITATDVKGIN----KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
IDRE + Y L + ATD AE VTV V D NDN+PVF
Sbjct: 1494 IDREAIDTYRLTVLATDQAAPPAQRLSAEKLVTVIVEDVNDNAPVF-------------V 1540
Query: 125 SLNSNVSHWK--KFSSIGSVSATDADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDP 178
S+N+ + + I + A DAD V Y++ +++ + TG + L
Sbjct: 1541 SMNAAILPVRDSAMGEIMRIHAQDADSSSNGLVTYEMIGGNTDIFQLHRTTGVITLRKPI 1600
Query: 179 PSDDVEYELTVEAHD 193
P D Y+L+V A D
Sbjct: 1601 PKPDTRYQLSVRATD 1615
>gi|355691768|gb|EHH26953.1| hypothetical protein EGK_17044 [Macaca mulatta]
Length = 4349
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G PIL+ S+ V Y + +GN + F++ S SG L+ T ++D
Sbjct: 1676 GSPILLVSAMSSSE--VTYELREGNKDGVFSMN------------SYSG-LISTQKNLDH 1720
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E+++ Y L I +++ G + V VD++DENDN+P+F + + VG + +
Sbjct: 1721 EKISSYQLKIRGSNMAGA-FTDVMVVVDIIDENDNAPMFLKSTF---VGQISEAAPLYSM 1776
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EY 185
K ++ + A+D+D + + YK+ P L I P G L + + + + +
Sbjct: 1777 IMDKNNNPFVIHASDSDKETNSLLVYKILEPEALKFFKIDPSMGTLTIVSEMDYESMPSF 1836
Query: 186 ELTVEAHDLQSPSRYAREPAQVWLQF----NSPVLQDEQLLQM 224
+ V HD SP +A PAQV + +SP EQ+ ++
Sbjct: 1837 QFCVYVHDQGSPILFAPRPAQVIIHVRDVNDSPPRFSEQIYEV 1879
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 79/178 (44%), Gaps = 32/178 (17%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS+ G V L L A + Q+ Y IT+G+ F + E R S+
Sbjct: 2916 VENSEPGKLVVTLKTLDADISEQNRQVTCY-ITEGDPLGQFGISQ-VGDEWRISSRKT-- 2971
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+DRE A+Y L +TA+D G +A V + VLD NDNSP SQ VY V
Sbjct: 2972 --------LDREHTAKYLLRVTASD--GKFQASVTVEIFVLDVNDNSPQCSQLVYTGKV- 3020
Query: 121 DLKSSLNSNVSHWKKFSS--IGSVSATDADGD---KVAYKLAVP-SNLVVIVPQTGEL 172
H F I VSATD D D ++ Y L P ++ + P TGEL
Sbjct: 3021 -----------HEDVFPGHFILKVSATDLDTDTNAQITYSLHGPGAHEFKLDPHTGEL 3067
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLV 80
P VRY I G+ + F + +R T+S + LL +RE Y+L+
Sbjct: 65 PQWAVRYRIISGDVANAFKTEEYVVGNFCFLRIRTKSSNTALL------NREVRDSYTLI 118
Query: 81 ITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD---LKSSLNSNVSHWKKFS 137
I AT+ +A T V V +LD+ND P+FS YR + + LK S
Sbjct: 119 IQATEKTLELEALTRVVVHILDQNDLKPLFSPPSYRVTISEDMPLK-------------S 165
Query: 138 SIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTG 176
I V+ATDAD + A Y S + I P +G + + G
Sbjct: 166 PICKVTATDADLGQNAEFYYAFNTRSEMFAIHPTSGVVTVAG 207
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 28/169 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN+ F + E ++G LL + +D E Y L +T D+
Sbjct: 752 YVIADGNEEGCFDI------------ELETG-LLTVAAPLDYEATNFYILNVTVYDLGTP 798
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K+ +TV+V D NDN+P F Y+ + + ++ V ++I ++ DAD
Sbjct: 799 QKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE-----DTEVG-----TTIAELTTKDAD 848
Query: 149 GD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSD-DVEYELTVEAHD 193
+ +V Y L P+ + P TGEL++TG + + Y L VEA D
Sbjct: 849 SEDNGRVRYTLLSPTEKFSLHPLTGELVVTGHLDRESEPRYILKVEARD 897
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 25/201 (12%)
Query: 26 QLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
++V +T N + LK P++ + +++G L+ T+ +D + A Y L I +
Sbjct: 380 RVVMVRVTPAFPNLQYVLK-PSSENVGFKLNARTG-LITTTKLMDFHDRAHYQLHIRTSP 437
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ T V +D++D N+++P+F++ Y +L+ N+ +S+ +V+AT
Sbjct: 438 ----GQVSTMVVIDIVDCNNHAPIFNRSSY-------DGTLDENI---PPGTSVLAVTAT 483
Query: 146 DADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHDLQSPSR 199
D D + V Y +A P L + ++ T P ++ Y V A D SP R
Sbjct: 484 DRDHGENGYVTYSIAGPKALPFSIDPYLGIISTSKPTDYELMKRIYTFRVRASDWGSPFR 543
Query: 200 YAREPAQVWLQFNSPVLQDEQ 220
+E ++LQ + L D Q
Sbjct: 544 REKE-VSIFLQLRN--LNDNQ 561
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
+T+ K+GVL VT G +D E ++ + ATD + +E V V V D NDN P FSQ
Sbjct: 2217 TTDFKTGVLTVT-GPLDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQL 2275
Query: 114 VY 115
VY
Sbjct: 2276 VY 2277
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 31/126 (24%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ ++IT GN + F + +P T LL T+ +DRE ++ L +T D
Sbjct: 1172 LTFNITSGN-HMGFFIIHPVTG------------LLSTARQLDRENKDEHILEVTVLDNG 1218
Query: 88 GIN-KAETHVTVDVLDENDNSPVFSQK-----------------VYRFIVGDLKSSLNSN 129
+ K+ + V + +LD NDN PVFS K VYR + DL LN
Sbjct: 1219 EPSLKSTSRVVIGILDVNDNPPVFSHKLFNVRLPERLSPVSSGPVYRLVASDLDEGLNGR 1278
Query: 130 VSHWKK 135
V++ K
Sbjct: 1279 VTYSIK 1284
>gi|402873140|ref|XP_003900444.1| PREDICTED: protocadherin Fat 2 [Papio anubis]
Length = 4349
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G PIL+ S+ V Y + +GN + F++ S SG L+ T ++D
Sbjct: 1676 GSPILLVSAMSSSE--VTYELREGNKDGVFSMN------------SYSG-LISTQKNLDH 1720
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E+++ Y L I +++ G + V VD++DENDN+P+F + + VG + +
Sbjct: 1721 EKISSYQLKIRGSNMAGA-FTDVMVVVDIIDENDNAPMFLKSTF---VGQISEAAPLYSM 1776
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EY 185
K ++ + A+D+D + + YK+ P L I P G L + + + + +
Sbjct: 1777 IMDKNNNPFVIHASDSDKETNSLLVYKILEPEALKFFKIDPSMGTLTIVSEMDYESMPSF 1836
Query: 186 ELTVEAHDLQSPSRYAREPAQVWLQF----NSPVLQDEQLLQM 224
+ V HD SP +A PAQV + +SP EQ+ ++
Sbjct: 1837 QFCVYVHDQGSPILFAPRPAQVIIHVRDVNDSPPRFSEQIYEV 1879
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 79/178 (44%), Gaps = 32/178 (17%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS+ G V L L A + Q+ Y IT+G+ F + E R S+
Sbjct: 2916 VENSEPGKLVVTLKTLDADISEQNRQVTCY-ITEGDPLGQFGISQ-VGDEWRISSRKT-- 2971
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+DRE A+Y L +TA+D G +A V + VLD NDNSP SQ VY V
Sbjct: 2972 --------LDREHTAKYLLRVTASD--GKFQASVTVEIFVLDVNDNSPQCSQLVYTGKV- 3020
Query: 121 DLKSSLNSNVSHWKKFSS--IGSVSATDADGD---KVAYKLAVP-SNLVVIVPQTGEL 172
H F I VSATD D D ++ Y L P ++ + P TGEL
Sbjct: 3021 -----------HEDVFPGHFILKVSATDLDTDTNAQITYSLHGPGAHEFKLDPHTGEL 3067
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLV 80
P VRY I G+ + F + +R T+S + LL +RE Y+L+
Sbjct: 65 PQWAVRYRIISGDVANAFKTEEYVVGNFCFLRIRTKSSNTALL------NREVRDSYTLI 118
Query: 81 ITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD---LKSSLNSNVSHWKKFS 137
I AT+ +A T V V +LD+ND P+FS YR + + LK S
Sbjct: 119 IQATEKTLELEALTRVVVHILDQNDLKPLFSPPSYRVTISEDMPLK-------------S 165
Query: 138 SIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTG 176
I V+ATDAD + A Y S + I P +G + + G
Sbjct: 166 PICKVTATDADLGQNAEFYYAFNTRSEMFAIHPTSGVVTVAG 207
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 28/169 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN+ F + E ++G LL + +D E Y L +T D+
Sbjct: 752 YVIADGNEEGCFDI------------ELETG-LLTVAAPLDYEVTNFYILNVTVYDLGTP 798
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K+ +TV+V D NDN+P F Y+ + + ++ V ++I ++ DAD
Sbjct: 799 QKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE-----DTEVG-----TTIAELTTKDAD 848
Query: 149 GD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSD-DVEYELTVEAHD 193
+ +V Y L P+ + P TGEL++TG + + Y L VEA D
Sbjct: 849 SEDNGRVRYTLLSPTEKFSLHPLTGELVVTGHLDRESEPRYILKVEARD 897
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 25/201 (12%)
Query: 26 QLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
++V +T N + LK P++ + +++G L+ T+ +D + A Y L I +
Sbjct: 380 RVVMVRVTPAFPNLQYVLK-PSSENVGFKLNARTG-LITTTKLMDFHDRAHYQLHIRTSP 437
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ T V +D++D N+++P+F++ Y +L+ N+ +S+ +V+AT
Sbjct: 438 ----GQVSTMVVIDIVDCNNHAPIFNRSSY-------DGTLDENI---PPGTSVLAVTAT 483
Query: 146 DADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHDLQSPSR 199
D D + V Y +A P L + ++ T P ++ Y V A D SP R
Sbjct: 484 DRDHGENGYVTYSIAGPKALPFSIDPYLGIISTSKPTDYELMKRIYTFRVRASDWGSPFR 543
Query: 200 YAREPAQVWLQFNSPVLQDEQ 220
+E ++LQ + L D Q
Sbjct: 544 REKE-VSIFLQLRN--LNDNQ 561
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
+T+ K+GVL VT G +D E ++ + ATD + +E V V V D NDN P FSQ
Sbjct: 2217 TTDFKTGVLTVT-GPLDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQL 2275
Query: 114 VY 115
VY
Sbjct: 2276 VY 2277
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 31/126 (24%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ ++IT GN + F + +P T LL T+ +DRE ++ L +T D
Sbjct: 1172 LTFNITSGN-HMGFFIIHPVTG------------LLSTARQLDRENKDEHILEVTVLDNG 1218
Query: 88 GIN-KAETHVTVDVLDENDNSPVFSQK-----------------VYRFIVGDLKSSLNSN 129
+ K+ + V + +LD NDN PVFS K VYR + DL LN
Sbjct: 1219 EPSLKSTSRVVIGILDVNDNPPVFSHKLFNVRLPERLSPVSSGPVYRLVASDLDEGLNGR 1278
Query: 130 VSHWKK 135
V++ K
Sbjct: 1279 VTYSVK 1284
>gi|270006423|gb|EFA02871.1| cadherin-like protein [Tribolium castaneum]
Length = 3284
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 98/236 (41%), Gaps = 38/236 (16%)
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
G +DRE+ +Y L + A D G KAET +T+ + D+NDN+P F Y F +L+
Sbjct: 1155 GHLDREQQDEYLLKVAAVD--GAWKAETPLTITIQDQNDNAPEFEHSFYSFNFPELQ--- 1209
Query: 127 NSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELL--------L 174
+ +G V+ATD D ++Y L PS+L + P +G++
Sbjct: 1210 -------RDVVFVGQVAATDRDKQGPNSVISYSLQQPSDLFTVDPASGDIFSKRSLRFKY 1262
Query: 175 TGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQMIDRKSEA 231
T S + Y LT+ A D P + V + N+P + L S
Sbjct: 1263 TQMEASPENMYSLTILATDNGKPPMSSECLVTVNVVDANNNAPKFDKPEYL------SPV 1316
Query: 232 PHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
P ++ ++ V ++DF + I + + E F I N WIT+
Sbjct: 1317 PDDAQEGQLLLKVTAKDKLDFG-----VNAEINYVIVGGNGSENFAIDKYNGWITL 1367
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 116/300 (38%), Gaps = 53/300 (17%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
++ YS+ +G+D H KN +GVL + +DRE Y L + A+D
Sbjct: 76 VLEYSLIRGDDGHFVLDKN-------------TGVLTLVD-SLDRETKDVYKLTVRASD- 120
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
G +T +TV + D NDN P F + Y F + + N+ H +G V A D
Sbjct: 121 -GNQHTDTVLTVQITDTNDNPPAFLETAYSFDIPE-----NAQRGH-----KVGQVKAVD 169
Query: 147 AD-GDKVAYKLAVPS----NLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRY 200
AD G +V S ++ + PQTG LT ++V+ Y L V+A D P+
Sbjct: 170 ADLGINAQLTYSVISDWANDVFSLNPQTGVFTLTSRLDYEEVQHYILVVQAQDAGHPALS 229
Query: 201 AREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEME 260
+ L VL + D S E + + D D
Sbjct: 230 ST------LTVYCNVLDLNDNTPLFDPMSYTNEIFENVSIATPIVTVSATDLDSGD---N 280
Query: 261 GRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQA 320
G+IVF + DEN + NG V KK D E G + VT +QA
Sbjct: 281 GKIVF---------RITAGDENGDFEMTPNGTVITKKELDRERQG---LYNLVVTATDQA 328
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LL SG IDRE + Y+L ITA D +A T + V +LDENDNSPVF K Y
Sbjct: 411 LLRVSGRIDRETKSNYTLSITARDRGDPPRATHTKIFVRILDENDNSPVFDPKQY----- 465
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+S+ N S +S+ VSATD D
Sbjct: 466 --SASIAENASIG---ASVLQVSATDVD 488
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 70/318 (22%), Positives = 128/318 (40%), Gaps = 70/318 (22%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN G+ + L + + + P+ ++RY I+ GN+ FA+ + SG
Sbjct: 1423 ENEPLGSTI--LTVNASDDDQGPNGMIRYKISGGNERKEFAV------------DPYSGA 1468
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVG 120
+ + +D + + +Y L ITA D+ ++ T +T+ + D NDNSP F+Q +Y +
Sbjct: 1469 VTILQ-PLDYDTIQEYHLNITAEDLGFKPQSTTAMLTITLTDINDNSPTFNQSIYEAYIS 1527
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLA--VPSNLVVIVPQTGELLLT 175
+ +L N S + V ATD D K + Y ++ ++ I +TG +
Sbjct: 1528 E---NLPPN-------SFVFQVKATDIDSPKNAIIQYSISDGPDKDMFAIDQKTGRVT-- 1575
Query: 176 GDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRI 235
+Y E +DL + + A P +SP+ +L I+ +E
Sbjct: 1576 -------AKYSFDYEENDLYTINIVASNP-------DSPMFGIAELRVHINGVNE----- 1616
Query: 236 EKRRVTRAVRPTKRIDFSET---------------DGEMEGRIVFALEKETEREKFKIRD 280
R ++P D SE+ D +G++ + + F I
Sbjct: 1617 ---YYPRFIQPVFHFDVSESAEVGTQVGTVQATDQDAGDDGKVYYLFVGSSNDRGFNINS 1673
Query: 281 ENPWITVDENGDVRVKKR 298
E+ I+V + D + R
Sbjct: 1674 ESGVISVSRSLDRETQSR 1691
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
++ TS +DREE Y + A D A ++T+ V DENDNSP FS Y +
Sbjct: 732 IITTSAILDREETEIYYFTVMAQDCSATEPRAAAVNLTITVTDENDNSPSFSSTKYEVNI 791
Query: 120 GD 121
D
Sbjct: 792 SD 793
>gi|355750344|gb|EHH54682.1| hypothetical protein EGM_15570 [Macaca fascicularis]
Length = 4349
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G PIL+ S+ V Y + +GN + F++ S SG L+ T ++D
Sbjct: 1676 GSPILLVSAMSSSE--VTYELREGNKDGVFSMN------------SYSG-LISTQKNLDH 1720
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E+++ Y L I +++ G + V VD++DENDN+P+F + + VG + +
Sbjct: 1721 EKISSYQLKIRGSNMAGA-FTDVMVVVDIIDENDNAPMFLKSTF---VGQISEAAPLYSM 1776
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EY 185
K ++ + A+D+D + + YK+ P L I P G L + + + + +
Sbjct: 1777 IMDKNNNPFVIHASDSDKETNSLLVYKILEPEALKFFKIDPSMGTLTIVSEMDYESMPSF 1836
Query: 186 ELTVEAHDLQSPSRYAREPAQVWLQF----NSPVLQDEQLLQM 224
+ V HD SP +A PAQV + +SP EQ+ ++
Sbjct: 1837 QFCVYVHDQGSPILFAPRPAQVIIHVRDVNDSPPRFSEQIYEV 1879
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 79/178 (44%), Gaps = 32/178 (17%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS+ G V L L A + Q+ Y IT+G+ F + E R S+
Sbjct: 2916 VENSEPGKLVVTLKTLDADISEQNRQVTCY-ITEGDPLGQFGISQ-VGDEWRISSRKT-- 2971
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+DRE A+Y L +TA+D G +A V + VLD NDNSP SQ VY V
Sbjct: 2972 --------LDREHTAKYLLRVTASD--GKFQASVTVEIFVLDVNDNSPQCSQLVYTGKV- 3020
Query: 121 DLKSSLNSNVSHWKKFSS--IGSVSATDADGD---KVAYKLAVP-SNLVVIVPQTGEL 172
H F I VSATD D D ++ Y L P ++ + P TGEL
Sbjct: 3021 -----------HEDVFPGHFILKVSATDLDTDTNAQITYSLHGPGAHEFKLDPHTGEL 3067
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLV 80
P VRY I G+ + F + +R T+S + LL +RE Y+L+
Sbjct: 65 PQWAVRYRIISGDVANAFKTEEYVVGNFCFLRIRTKSSNTALL------NREVRDSYTLI 118
Query: 81 ITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD---LKSSLNSNVSHWKKFS 137
I AT+ +A T V V +LD+ND P+FS YR + + LK S
Sbjct: 119 IQATEKTLELEALTRVVVHILDQNDLKPLFSPPSYRVTISEDTPLK-------------S 165
Query: 138 SIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTG 176
I V+ATDAD + A Y S + I P +G + + G
Sbjct: 166 PICKVTATDADLGQNAEFYYAFNTRSEMFAIHPTSGVVTVAG 207
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 28/169 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN+ F + E ++G LL + +D E Y L +T D+
Sbjct: 752 YVIADGNEEGCFDI------------ELETG-LLTVAAPLDYEATNFYILNVTVYDLGTP 798
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K+ +TV+V D NDN+P F Y+ + + ++ V ++I ++ DAD
Sbjct: 799 QKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE-----DTEVG-----TTIAELTTKDAD 848
Query: 149 GD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSD-DVEYELTVEAHD 193
+ +V Y L P+ + P TGEL++TG + + Y L VEA D
Sbjct: 849 SEDNGRVRYTLLSPTEKFSLHPLTGELVVTGHLDRESEPRYILKVEARD 897
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 25/201 (12%)
Query: 26 QLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
++V +T N + LK P++ + +++G L+ T+ +D + A Y L I +
Sbjct: 380 RVVMVRVTPAFPNLQYVLK-PSSENVGFKLNARTG-LITTTKLMDFHDRAHYQLHIRTSP 437
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ T V +D++D N+++P+F++ Y +L+ N+ +S+ +V+AT
Sbjct: 438 ----GQVSTMVVIDIVDCNNHAPIFNRSSY-------DGTLDENI---PPGTSVLAVTAT 483
Query: 146 DADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHDLQSPSR 199
D D + V Y +A P L + ++ T P ++ Y V A D SP R
Sbjct: 484 DRDHGENGYVTYSIAGPKALPFSIDPYLGIISTSKPTDYELMKRIYTFRVRASDWGSPFR 543
Query: 200 YAREPAQVWLQFNSPVLQDEQ 220
+E ++LQ + L D Q
Sbjct: 544 REKE-VSIFLQLRN--LNDNQ 561
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
+T+ K+GVL VT G +D E ++ + ATD + +E V V V D NDN P FSQ
Sbjct: 2217 TTDFKTGVLTVT-GPLDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQL 2275
Query: 114 VY 115
VY
Sbjct: 2276 VY 2277
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 31/126 (24%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ ++IT GN + F + +P T LL T+ +DRE ++ L +T D
Sbjct: 1172 LTFNITSGN-HMGFFIIHPVTG------------LLSTARQLDRENKDEHILEVTVLDNG 1218
Query: 88 GIN-KAETHVTVDVLDENDNSPVFSQK-----------------VYRFIVGDLKSSLNSN 129
+ K+ + V + +LD NDN PVFS K VYR + DL LN
Sbjct: 1219 EPSLKSTSRVVIGILDVNDNPPVFSHKLFNVRLPERLSPVSSGPVYRLVASDLDEGLNGR 1278
Query: 130 VSHWKK 135
V++ K
Sbjct: 1279 VTYSIK 1284
>gi|391338304|ref|XP_003743499.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
suppressor-like [Metaseiulus occidentalis]
Length = 4957
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 68/136 (50%), Gaps = 18/136 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE AQ+ L + +D G+ ET+V + VLD NDNSPVFS ++ F + +
Sbjct: 1805 LDRELAAQHQLTVRVSD--GVQSCETNVDITVLDTNDNSPVFSHSMFSFDIPE------- 1855
Query: 129 NVSHWKKFSSIGSVSATDAD---GDKVAYKLAV--PSNLVVIVPQTGELLLTGDPPSDDV 183
+ IGSV ATDAD +V+Y + ++L + PQTG LT + +
Sbjct: 1856 ---DTPRGHKIGSVRATDADIGQNGQVSYSVLSDWGNDLFSLNPQTGVFTLTSNLDYEQY 1912
Query: 184 E-YELTVEAHDLQSPS 198
+ Y V A D PS
Sbjct: 1913 QHYIFVVSAQDAGVPS 1928
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 96/218 (44%), Gaps = 31/218 (14%)
Query: 91 KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA-DG 149
K+ET + V VLDENDN PVFS+KVY+ + S +N + I VSATD DG
Sbjct: 1188 KSETRIVVHVLDENDNPPVFSRKVYK---SPISESTPAN-------TQIARVSATDPDDG 1237
Query: 150 DKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDL--QSPSRYAREPA 205
+P +++V I +G++ L+ + V EY LTV A D + R+A
Sbjct: 1238 PNGMIVYTIPDTDVVTIDSVSGQISLSKTLDRETVTEYSLTVIASDAAPMASRRFA---- 1293
Query: 206 QVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVF 265
N +L + + + + I + T + + D + G + +
Sbjct: 1294 --VATLNLIILDENDNFPVFNASTHESKEIPED--TEIGAEIYQFSAEDMDLGLNGEVSY 1349
Query: 266 ALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEE 303
++ R+ F+I IT G +RV K DFE+
Sbjct: 1350 SISAGNIRDAFRID----AIT----GVLRVNKALDFEQ 1379
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 11/88 (12%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LL + ++DRE ++Y +++ A D K A T + V VLDENDNSPVF Q+ Y ++
Sbjct: 2110 LLRVNSELDRELKSEYQIIVVAKDRGKPPLSATTTIIVHVLDENDNSPVFEQRQYEAVMS 2169
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ NS V S+ VSATD D
Sbjct: 2170 E-----NSPVEK-----SVIKVSATDFD 2187
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 121/296 (40%), Gaps = 63/296 (21%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ LV Y I GND H FA+ + K+G L+ T ++REE L I A
Sbjct: 493 NALVFYGIESGNDRHWFAI------------DKKTG-LVTTVEILNREEQDLVELKIYAH 539
Query: 85 DVKGINK--AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
D G N+ A T + + + DEND +P F++ L +L+ N + + + +
Sbjct: 540 D-GGPNRKFAYTTLKIHIQDENDEAPA-------FVMNHLNVTLSENAT---PHALVTQI 588
Query: 143 SATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE------------YEL 187
+ATD D V+Y L L Q G++ DP S + Y+L
Sbjct: 589 TATDNDLGPNGTVSYALQSSVKL-----QYGDMFEI-DPLSGRITTAMALDRERCAFYQL 642
Query: 188 TVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRP- 246
TV A D PS +S V + + D + I +V ++P
Sbjct: 643 TVIAKDNGQPS------------LSSTVNVSVHVADVNDNRPILYPSIYFHQVRSGIKPG 690
Query: 247 --TKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWD 300
+ R+ S+ D + RIVF++ E ++FKI D I D R + R++
Sbjct: 691 AFSTRVYASDADEGVNARIVFSIVNGAE-DRFKINDATGEILNTRVLDTRQQARYE 745
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 71/139 (51%), Gaps = 19/139 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+ T+ +IDRE Y L ITATD + +E +T+ + D NDN+P F VG
Sbjct: 1477 IYTAREIDREFTDTYKLTITATDHGEPALTSEKALTLVIEDVNDNAPSF------ISVGT 1530
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP-SNLVVIVPQTGELLLTGD 177
+ +N SH SI +V+ATD D +V+Y+L +L + TGE+LL +
Sbjct: 1531 AVLPVPANRSH-----SIMAVTATDPDAGTNGQVSYELVGGIHHLFDLDRMTGEILLKQN 1585
Query: 178 --PPSD-DVEYELTVEAHD 193
P S DV Y+L + A D
Sbjct: 1586 LLPTSQFDVSYQLKIRAFD 1604
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 82/194 (42%), Gaps = 31/194 (15%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
GL + + + + Y I GN F + + +G + V + +D
Sbjct: 2595 GLLLTTIRAKSSLYSTINYRIGGGNLGDVFGVN------------ASTGAVFV-AKKLDY 2641
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E V +YSL I A ++ A T + V V D NDNSP+ SQ V+ V + ++
Sbjct: 2642 ETVKEYSLWIQAENINSKLSAATELQVRVQDVNDNSPMCSQAVFNVTVMEEQAP------ 2695
Query: 132 HWKKFSSIGSVSATDAD----GDKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSDDVE- 184
+F + V ATDAD GD V Y+ ++L I TG++ + +
Sbjct: 2696 --PEF--VAQVHATDADEGTNGD-VFYQFESVAETSLFSIESDTGKVFTRSKLDRETMSR 2750
Query: 185 YELTVEAHDLQSPS 198
Y L V+A D P+
Sbjct: 2751 YRLIVQAVDRGFPA 2764
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 16/102 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+ +G +DRE +Y+L +T D G K +T +T+ V D NDNSP F + Y F + +
Sbjct: 2840 VTVAGSLDRELKDEYNLKVTVFD--GAWKKDTPLTITVTDVNDNSPQFGKTEYTFYLAE- 2896
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDADGD----KVAYKLAVPS 160
K + S V G + A D D + +++Y L PS
Sbjct: 2897 KQVIQSYV---------GLIQAIDRDKEGRNSRISYFLKRPS 2929
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 22/135 (16%)
Query: 29 RYSITQGNDNHTFALK---NPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
+Y I GN++ F L+ +P T + + L T +DRE+ Y L I+A D
Sbjct: 155 KYRIVGGNEDGKFDLRTSNDPNTFSV-------VFLYLETVATLDREQKEFYRLNISAED 207
Query: 86 VKGIN---KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
G N V + VLD NDN P+F Y S+N ++ + + +
Sbjct: 208 --GGNPPMHGYLIVNITVLDTNDNPPIFDHSAYSV-------SMNESLPAGHRVLQVHAS 258
Query: 143 SATDADGDKVAYKLA 157
A D +++Y LA
Sbjct: 259 DADAGDNARISYSLA 273
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 16/83 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I GN N F + +P T ++ T+ ++DRE ++ Y+L + A D GI
Sbjct: 3450 YAILDGNINRAFTI-DPNTGDLH------------TASNLDRESMSHYNLTVGAID-NGI 3495
Query: 90 --NKAETHVTVDVLDENDNSPVF 110
+T V V + D NDN+P F
Sbjct: 3496 PSQTGQTTVLVTIADVNDNAPYF 3518
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 4/61 (6%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFS 111
S ES +G + T +DRE +++Y L++ A D +G N V V+V D+NDNSP F+
Sbjct: 2729 SIESDTGKVF-TRSKLDRETMSRYRLIVQAVD-RGFPANTGTCTVMVEVADKNDNSPRFT 2786
Query: 112 Q 112
+
Sbjct: 2787 R 2787
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 14/109 (12%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE+ ++Y+ + A D T + + V D NDN+PVF + Y V +
Sbjct: 2330 LDREQQSEYTATVLAIDSGTPRLTGTGTLILSVSDRNDNAPVFEKPFYEIHVSE------ 2383
Query: 128 SNVSHWKKFSSIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELL 173
+ + I ++ATD+D A Y L PS + PQTG L+
Sbjct: 2384 ----NLPADTFIAKITATDSDQGLNALLRYTLKEPSGWFELDPQTGVLI 2428
>gi|301753541|ref|XP_002912599.1| PREDICTED: protocadherin beta-6-like [Ailuropoda melanoleuca]
Length = 797
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 74/149 (49%), Gaps = 23/149 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE AQY++ IT TD+ K + ++TV V D NDN+P FSQ Y V +
Sbjct: 403 LVTEGALDRESQAQYNITITVTDLGTPRLKTQHNLTVTVSDVNDNAPAFSQSSYTLRVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP--------SNLVVIVPQTG 170
NS H IGSVSATD D +V Y L +P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDAGANAQVTYSLLLPPHDPHLPLASLVSINADNG 512
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
+L + ++ +E V A D SP+
Sbjct: 513 QLFALRALDYEALQAFEFGVRAADRGSPA 541
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 45 NPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLD 102
NP H + R+ ++ + LV +DREE ++ L +TA D ++ T + + VLD
Sbjct: 176 NPHFHVLTRHRSDGRKFPELVLDKALDREEQPEHRLTLTALDGGSPPRSGTTEIKILVLD 235
Query: 103 ENDNSPVFSQKVY 115
NDN+P F+Q++Y
Sbjct: 236 SNDNAPEFAQELY 248
>gi|109079410|ref|XP_001110265.1| PREDICTED: protocadherin Fat 2-like [Macaca mulatta]
Length = 4349
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G PIL+ S+ V Y + +GN + F++ S SG L+ T ++D
Sbjct: 1676 GSPILLVSAMSSSE--VTYELREGNKDGVFSMN------------SYSG-LISTQKNLDH 1720
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E+++ Y L I +++ G + V VD++DENDN+P+F + + VG + +
Sbjct: 1721 EKISSYQLKIRGSNMAGA-FTDVMVVVDIIDENDNAPMFLKSTF---VGQISEAAPLYSM 1776
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EY 185
K ++ + A+D+D + + YK+ P L I P G L + + + + +
Sbjct: 1777 IMDKNNNPFVIHASDSDKETNSLLVYKILEPEALKFFKIDPSMGTLTIVSEMDYESMPSF 1836
Query: 186 ELTVEAHDLQSPSRYAREPAQVWLQF----NSPVLQDEQLLQM 224
+ V HD SP +A PAQV + +SP EQ+ ++
Sbjct: 1837 QFCVYVHDQGSPILFAPRPAQVIIHVRDVNDSPPRFSEQIYEV 1879
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 79/178 (44%), Gaps = 32/178 (17%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS+ G V L L A + Q+ Y IT+G+ F + E R S+
Sbjct: 2916 VENSEPGKLVVTLKTLDADISEQNRQVTCY-ITEGDPLGQFGISQ-VGDEWRISSRKT-- 2971
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+DRE A+Y L +TA+D G +A V + VLD NDNSP SQ VY V
Sbjct: 2972 --------LDREHTAKYLLRVTASD--GKFQASVTVEIFVLDVNDNSPQCSQLVYTGKV- 3020
Query: 121 DLKSSLNSNVSHWKKFSS--IGSVSATDADGD---KVAYKLAVP-SNLVVIVPQTGEL 172
H F I VSATD D D ++ Y L P ++ + P TGEL
Sbjct: 3021 -----------HEDVFPGHFILKVSATDLDTDTNAQITYSLHGPGAHEFKLDPHTGEL 3067
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLV 80
P VRY I G+ + F + +R T+S + LL +RE Y+L+
Sbjct: 65 PQWAVRYRIISGDVANAFKTEEYVVGNFCFLRIRTKSSNTALL------NREVRDSYTLI 118
Query: 81 ITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD---LKSSLNSNVSHWKKFS 137
I AT+ +A T V V +LD+ND P+FS YR + + LK S
Sbjct: 119 IQATEKTLELEALTRVVVHILDQNDLKPLFSPPSYRVTISEDMPLK-------------S 165
Query: 138 SIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTG 176
I V+ATDAD + A Y S + I P +G + + G
Sbjct: 166 PICKVTATDADLGQNAEFYYAFNTRSEMFAIHPTSGVVTVAG 207
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 28/169 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN+ F + E ++G LL + +D E Y L +T D+
Sbjct: 752 YVIADGNEEGCFDI------------ELETG-LLTVAAPLDYEATNFYILNVTVYDLGTP 798
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K+ +TV+V D NDN+P F Y+ + + ++ V ++I ++ DAD
Sbjct: 799 QKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE-----DTEVG-----TTIAELTTKDAD 848
Query: 149 GD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSD-DVEYELTVEAHD 193
+ +V Y L P+ + P TGEL++TG + + Y L VEA D
Sbjct: 849 SEDNGRVRYTLLSPTEKFSLHPLTGELVVTGHLDRESEPRYILKVEARD 897
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 25/201 (12%)
Query: 26 QLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
++V +T N + LK P++ + +++G L+ T+ +D + A Y L I +
Sbjct: 380 RVVMVRVTPAFPNLQYVLK-PSSENVGFKLNARTG-LITTTKLMDFHDRAHYQLHIRTSP 437
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ T V +D++D N+++P+F++ Y +L+ N+ +S+ +V+AT
Sbjct: 438 ----GQVSTMVVIDIVDCNNHAPIFNRSSY-------DGTLDENI---PPGTSVLAVTAT 483
Query: 146 DADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHDLQSPSR 199
D D + V Y +A P L + ++ T P ++ Y V A D SP R
Sbjct: 484 DRDHGENGYVTYSIAGPKALPFSIDPYLGIISTSKPTDYELMKRIYTFRVRASDWGSPFR 543
Query: 200 YAREPAQVWLQFNSPVLQDEQ 220
+E ++LQ + L D Q
Sbjct: 544 REKE-VSIFLQLRN--LNDNQ 561
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
+T+ K+GVL VT G +D E ++ + ATD + +E V V V D NDN P FSQ
Sbjct: 2217 TTDFKTGVLTVT-GPLDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQL 2275
Query: 114 VY 115
VY
Sbjct: 2276 VY 2277
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 56/126 (44%), Gaps = 31/126 (24%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ ++IT GN + F + +P T LL T+ +DRE ++ L +T D
Sbjct: 1172 LTFNITSGN-HMGFFIIHPVTG------------LLSTARQLDRENKDEHILEVTVLDNG 1218
Query: 88 GIN-KAETHVTVDVLDENDNSPVFSQK-----------------VYRFIVGDLKSSLNSN 129
+ K+ + V + +LD NDN PVFS K VYR + DL LN
Sbjct: 1219 EPSLKSTSRVVIGILDVNDNPPVFSHKLFNVRLPERLSPVSSGPVYRLVASDLDEGLNGR 1278
Query: 130 VSHWKK 135
V++ K
Sbjct: 1279 VTYSIK 1284
>gi|390459333|ref|XP_003732279.1| PREDICTED: protocadherin beta-15-like [Callithrix jacchus]
Length = 787
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAET 94
N T ++++ E++ S E+ LVT G +DRE A+Y++ IT TD+ K E
Sbjct: 378 NGKMTCSIQDDVPFELKPSVENF--YRLVTEGALDRETRAEYNITITVTDLGTPRLKTEH 435
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---K 151
+TV V D NDN+P F+Q Y F V + NS H IG+VSATD D +
Sbjct: 436 SITVQVSDVNDNAPAFTQTSYTFFVRE----NNSPALH------IGTVSATDRDSGTNAQ 485
Query: 152 VAYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
V Y L P ++LV I G L + ++ +E V A D SP+
Sbjct: 486 VTYSLLPPQDTHLALASLVSINADNGHLFALRSLDYEALQAFEFRVGATDGGSPA 540
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVY 115
LV ++DREE A+ L +TA D ++ T + V VLD NDN+PVF+Q +Y
Sbjct: 194 LVLDTELDREEQAELRLTLTALDGGSTPRSGTAQILVLVLDANDNAPVFAQALY 247
>gi|229442267|gb|AAI72776.1| FAT tumor suppressor 2 precursor [synthetic construct]
Length = 896
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 29/223 (13%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G PIL+ S+ P + V Y + +GN + F++ S SG L+ T +D
Sbjct: 336 GSPILLVSAMS-PSE-VTYELREGNKDGVFSMN------------SYSG-LISTQKKLDH 380
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E+++ Y L I +++ G + V VD++DENDN+P+F + + VG + +
Sbjct: 381 EKISSYQLKIRGSNMAG-AFTDVMVVVDIIDENDNAPMFLKSTF---VGQISEAAPLYSM 436
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EY 185
K ++ + A+D+D + + YK+ P L I P G L + + + + +
Sbjct: 437 IMDKNNNPFVIHASDSDKEANSLLVYKILEPEALKFFKIDPSMGTLTIVSEMDYESMPSF 496
Query: 186 ELTVEAHDLQSPSRYAREPAQVWLQF----NSPVLQDEQLLQM 224
+ V HD SP +A PAQV + +SP EQ+ ++
Sbjct: 497 QFCVYVHDQGSPVLFAPRPAQVIIHVRDVNDSPPRFSEQIYEV 539
>gi|198475184|ref|XP_002132853.1| GA26057 [Drosophila pseudoobscura pseudoobscura]
gi|198138709|gb|EDY70255.1| GA26057 [Drosophila pseudoobscura pseudoobscura]
Length = 3586
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 83/161 (51%), Gaps = 20/161 (12%)
Query: 69 IDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE +Y LVI ATD A T V V VLD NDN P F + Y F + +
Sbjct: 1111 LDRETRDRYQLVILATDNGTPAAHARTRVLVRVLDANDNDPRFLRPQYEFRIEE------ 1164
Query: 128 SNVSHWKKFSSIGSVSATDAD-GDKVAYKLA-VPSNLVVIV-PQTGELLLTGDPPSDDVE 184
+ ++ S +G+V+A D D G+ A + + +P+N V P TGE + T +P ++
Sbjct: 1165 ----NLRRGSVVGAVAARDLDLGENAAVRYSLLPANSSFQVHPVTGE-ISTREPLDRELR 1219
Query: 185 --YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQ 220
Y+L VEA D +P R AR P +V + N+P + D Q
Sbjct: 1220 ALYDLVVEARDQGTPVRSARAPVRVHVSDVNDNAPEIADPQ 1260
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 119/277 (42%), Gaps = 62/277 (22%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG--INKAE 93
N ++L N T + + +SKSG L+ T G +DRE + YS ++ ATD + A
Sbjct: 1991 NARLVYSLANETQWQF--AIDSKSG-LITTVGKLDRELQSSYSFMVLATDGGRYEVRSAR 2047
Query: 94 THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GD 150
V ++VLD NDN PVF + Y +G + + + + K V A DAD
Sbjct: 2048 VAVQINVLDVNDNRPVFERYPY---IGQVPALIQPGQTLLK-------VQAHDADQGLNG 2097
Query: 151 KVAYKLAVPSNLVVIVPQTGELLLT--------------------GDPPSDDVEY-ELTV 189
++ Y L + I P TG L T G+PP V EL V
Sbjct: 2098 ELLYSLKGDAGKFRINPNTGALSATQSLASESGRLLQLEVVARDKGNPPQSSVGLIELLV 2157
Query: 190 EAHDLQSPS-RYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTK 248
+P R+ E +V L+ +SP +LLQ++ +S+ RR +
Sbjct: 2158 GEAPQGAPVLRFQNETYRVKLRESSPA--GLRLLQVVAVRSDG------RR--------Q 2201
Query: 249 RIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWI 285
++ FS G EG +F+L+ + +IR NP +
Sbjct: 2202 KVQFSFGAGNDEG--IFSLDPSSG----EIRVANPSL 2232
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 38/166 (22%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL---LVTSGDIDREEVAQYSLV 80
P+ RY+I GN N F L +S + GVL L SG +DRE YSL+
Sbjct: 204 PYNTQRYNIVSGNVNDAFRL---------SSHRERDGVLYLDLQISGFLDRETTPGYSLL 254
Query: 81 ITATD-----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK 135
I A D ++G+ V + + D NDN P+F+Q Y V + N+ V
Sbjct: 255 IEALDGGTPPLRGL----MTVNITIQDVNDNQPIFNQSRYFATVPE-----NATVG---- 301
Query: 136 FSSIGSVSATDADGDK---VAYKL----AVPSNLVVIVPQTGELLL 174
+S+ V A+D D ++ V Y + + + I PQTG + +
Sbjct: 302 -TSVLQVYASDTDAEENGLVEYAINRRQSDKEQMFRIDPQTGAIFI 346
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 77/179 (43%), Gaps = 35/179 (19%)
Query: 19 SSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYS 78
++H+ P VRYSI G+ + F + E SG + + +D E Q
Sbjct: 855 TAHRSP---VRYSIYSGDPDGYFGI------------EGGSGNIRIAR-PLDHEAKGQVL 898
Query: 79 LVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV---GDLKSSLNSNVSHWKK 135
L I AT + T V ++V D NDN+P F + R V DL + L + +H K
Sbjct: 899 LNIQATAGEPPVYGHTQVNIEVEDVNDNAPEFEASLVRISVPENADLGAPLYAAHAHDKD 958
Query: 136 FSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDL 194
S G +V Y LA L I P++G L+L S ++YE T + H L
Sbjct: 959 SGSSG----------QVTYSLARERQLFAIDPRSGHLVL-----SQHLDYE-TSQRHSL 1001
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 29/139 (20%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + YSIT GN + F S +++SG L + +DRE+ A+Y+L + A
Sbjct: 1885 PNADIIYSITGGNLGNKF------------SIDARSGEL--SCRPLDREQHARYTLQVQA 1930
Query: 84 TDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D + H + VL D+NDN+P F DL + S +S+
Sbjct: 1931 SDRGQPTSRQGHCNITVLVEDQNDNAPRF----------DLPKYVASVAEDAPLGASVVR 1980
Query: 142 VSATDAD---GDKVAYKLA 157
+ ATDAD ++ Y LA
Sbjct: 1981 IKATDADLGVNARLVYSLA 1999
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 13/122 (10%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
+S SG ++ ++ D E+ +Y + + A+D+ G A V V+V ++ +P FS++ Y
Sbjct: 2921 DSHSG-MVSSAAVFDFEQRQRYDMELRASDMGG-KGARVAVRVEVDSRDEFAPQFSERTY 2978
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGEL 172
RF+ L + + + F +G V+ATDAD +V Y+L+ P + +G +
Sbjct: 2979 RFV-------LPAAAALPQGF-VVGQVTATDADSGPDGRVVYQLSAPHTHFKVNRSSGAV 3030
Query: 173 LL 174
L+
Sbjct: 3031 LI 3032
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 52/100 (52%), Gaps = 18/100 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVT--VDVLDENDNSPVFSQKVYRFIVG 120
LV S +D E ++SLV+TATD G+ T++T VDV D NDN PVF + Y
Sbjct: 985 LVLSQHLDYETSQRHSLVVTATD-GGVPPLATNLTILVDVQDVNDNPPVFERDEYAV--- 1040
Query: 121 DLKSSLNSNVSHWKKFSS-IGSVSATDAD---GDKVAYKL 156
NVS + +S I V+ATD D ++ Y++
Sbjct: 1041 --------NVSESRPVNSQIVQVNATDLDTGNNARITYRI 1072
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 19/107 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK---VYRFI- 118
LV +D E +Y L + A+D ++A T +TV V DENDN+PVF + Y I
Sbjct: 2491 LVLKRRLDYEVQQEYQLEVIASDAA--HEARTTLTVRVNDENDNAPVFLAQQPPAYFAIL 2548
Query: 119 --VGDLKSSLNSNVSHWKKFSSIGSVSATDADGD----KVAYKLAVP 159
V ++ SL+ ++ + SV+ATDAD + K+ Y + P
Sbjct: 2549 PAVAEVADSLSMDL-------ELLSVNATDADAEGSNSKIRYSIDPP 2588
>gi|350581199|ref|XP_003480985.1| PREDICTED: protocadherin beta-5-like [Sus scrofa]
Length = 580
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 62/122 (50%), Gaps = 21/122 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DREE A+Y++ IT D+ + H +TV V D NDN+P FSQ Y V +
Sbjct: 402 LVTERPLDREERAEYNITITVGDLGTPRRHTQHNLTVRVADVNDNAPAFSQPAYTLRVRE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H IG+V ATDAD ++ Y L PS+ LV I P TG+
Sbjct: 462 ----NNSPALH------IGTVRATDADAGANAQLTYSLLPPSDPHLPLASLVAINPDTGQ 511
Query: 172 LL 173
L
Sbjct: 512 LF 513
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 69 IDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DREE + SL++TA D ++ T V ++V+D NDN+P F Q +Y + + S LN
Sbjct: 200 VDREEQPELSLILTALDGGAPPRSGTTAVRIEVVDINDNAPEFLQSLYEVQIPE-NSPLN 258
Query: 128 SNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
+ V+ +VSA D D VAY L
Sbjct: 259 TLVA---------AVSARDLDAGTYGNVAYAL 281
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D EE +Y++ ITATD G++ T V ++V D NDN+P + S+L S
Sbjct: 306 LDFEETQKYTVEITATDGGGLSGKCT-VAIEVEDVNDNAPELTM-----------STLAS 353
Query: 129 NVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTGE--LLLTGDPPSDD--- 182
+ + + S +D D GD ++ +L ++ T + L + P D
Sbjct: 354 STPENSPETVVAVFSVSDPDSGDNGRMVCSIQDDLPFLLKPTFKNFYTLVTERPLDREER 413
Query: 183 VEYELTVEAHDLQSPSRYAR 202
EY +T+ DL +P R+ +
Sbjct: 414 AEYNITITVGDLGTPRRHTQ 433
>gi|195401052|ref|XP_002059128.1| GJ16197 [Drosophila virilis]
gi|194156002|gb|EDW71186.1| GJ16197 [Drosophila virilis]
Length = 5168
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 116/282 (41%), Gaps = 43/282 (15%)
Query: 36 NDNHTFAL-KNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET 94
N N T++ +NP + +S+SG + V +G IDRE+ +Y L + A+D G +AET
Sbjct: 2951 NANATYSFSENPGK---KFKIDSQSGNITV-AGQIDREQQDEYILKVVASD--GAWRAET 3004
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GD 150
+T+ + D+NDN+P F Y F +L+ H F +G + ATD D
Sbjct: 3005 PITITIQDQNDNAPEFEHSFYSFNFPELQ--------HAVAF--VGQIIATDRDKQGPNS 3054
Query: 151 KVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEY--------ELTVEAHDLQSPSRYAR 202
++Y L PS + + P TGE+ +Y LT+ A D P Y
Sbjct: 3055 VISYSLQSPSPIFSVDPATGEIFSKTQIQYKHSQYISSPENMFALTILATDNGKPPLYTE 3114
Query: 203 EPAQVWL---QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEM 259
+ + N P + + L + ++ A R+ + + D +
Sbjct: 3115 CLVNINIVDANNNPPKFEHTEYLSPLPEQAGAGQRVVRVHAN-----------DDCDVGV 3163
Query: 260 EGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDF 301
I ++L F I + W+T+ + + R++
Sbjct: 3164 NAEIDYSLISSNLSAYFTINKHDGWVTLIKQIKLPANSRFEL 3205
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 128/295 (43%), Gaps = 58/295 (19%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFAL-KNPTTHEIRNSTESKSG 60
EN+ +GT V + ++ + + R I GN+ H F L K P H +R
Sbjct: 412 ENASNGTVVAAVSVIDSDDGLNGETTTR--IVSGNELHHFRLEKTPLFHIVR-------- 461
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+G +DREE+++Y+L + A D KG KA ++ +DV D ND+ PVF + Y +
Sbjct: 462 ----VNGVLDREEISKYNLTVVAID-KGTPERKAIAYLIIDVNDVNDHEPVFEKSEYTAV 516
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVI-VPQTGELLL 174
+ +L + + + S+ ATD D +V Y++ + L + T L++
Sbjct: 517 LSELAPT----------GTFVTSIVATDEDTGVNAQVFYEILTGNELKWFNIDTTTGLIV 566
Query: 175 TGDPPSDDVE--YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
T P +V+ EL++ A D ++A +V + +D EAP
Sbjct: 567 TTGPLDREVQASVELSISARDGGPNPKFAYTQLKVTI---------------LDENDEAP 611
Query: 233 HRIEKR---RVTRAVRP---TKRIDFSETDGEMEGRIVFALEKETER---EKFKI 278
H ++ ++ V P + ++ D G + F+L ER ++F I
Sbjct: 612 HFGQQELNVSLSEGVSPPTIVALLSATDNDQGTNGSVTFSLAPSVERLYPQQFAI 666
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 68/136 (50%), Gaps = 18/136 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE +Y++ I +D G+ ET + + V D NDN PVF + VY F + +
Sbjct: 1908 LDREAKDKYNMRIRVSD--GVQYTETDIIIQVDDTNDNPPVFEESVYSFDIPE------- 1958
Query: 129 NVSHWKKFSSIGSVSATDAD---GDKVAYKLAV--PSNLVVIVPQTGELLLTGDPPSDDV 183
+ + +G + A DAD +V+Y + +++ + PQTG L LT +DV
Sbjct: 1959 ---NAPRGYQVGEIVAKDADLAQNAQVSYAVVSDWANDVFSLNPQTGALTLTAKLDYEDV 2015
Query: 184 E-YELTVEAHDLQSPS 198
+ Y L V+A D PS
Sbjct: 2016 QHYILLVQAQDNGQPS 2031
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 66/145 (45%), Gaps = 19/145 (13%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN ++ F L T N + S + L T+G++DRE Y L I+A+D
Sbjct: 202 YEIVAGNLDNKFRLVTTT-----NPSGDTSYLHLETTGNLDRESRGSYQLNISASDGGSP 256
Query: 90 NK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ V V +LD NDN P+F D +LN V S + V A+D D
Sbjct: 257 PRLGFLQVNVTILDVNDNPPIFDHS-------DYSVTLNETV---MPGSPVLQVMASDND 306
Query: 149 -GD--KVAYKLAVPSNLVVIVPQTG 170
GD K+ Y LA + + P+TG
Sbjct: 307 LGDNSKLTYYLAETEHQFTVDPETG 331
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 30/120 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
V Y++ GN+ + F L +S +G LL+ + +DRE + L + A D
Sbjct: 1320 VYYTLVAGNEANLFGL------------DSATG-LLILAHRLDRESQEIHRLTVVARDAA 1366
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQ---------------KVYRFIVGDLKSSLNSNV 130
+K + ++T+ VLD+NDN+P F+Q ++ RF D +NS V
Sbjct: 1367 IKNSLTSSVNITITVLDDNDNAPEFTQSSSEISVLETSPSGTELMRFRASDADQGMNSQV 1426
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 17/118 (14%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+E +K T + + + S P+ + Y I GN + F + G
Sbjct: 1066 LETTKVNT--RFFALAASDSDLGPNGRIAYEIIDGNSDRKFGV-------------FPDG 1110
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRF 117
L V + +DREE Y+L I+ +D +++ V + V+DENDN P F+ + F
Sbjct: 1111 FLFVRA-PLDREERDYYALTISCSDAGTPSRSSVVPVVIHVIDENDNPPQFTNSTFTF 1167
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Query: 63 LVTSGDIDREEVAQYSLVITATDV------KGINKAETHVTVDVLDENDNSPVFSQ 112
+ T+ IDRE AQY LV+ A V G + +V + +LD NDN+P F+Q
Sbjct: 896 ITTARRIDREAQAQYQLVVMARSVNRSSSMSGFAYGKCNVHIAILDLNDNAPNFAQ 951
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 40/83 (48%), Gaps = 14/83 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
YSI GN +F + T E + VLL DRE++A Y+LVI A D
Sbjct: 3591 YSIINGNIKQSFKIDAETG-------EISTAVLL------DREDIAYYNLVIGAIDTGLP 3637
Query: 90 NKAETH-VTVDVLDENDNSPVFS 111
+ T V +D+ D NDN P FS
Sbjct: 3638 PQTGTATVRIDLDDINDNGPTFS 3660
>gi|162138878|ref|NP_001104603.1| protocadherin alpha 3 precursor [Gallus gallus]
gi|45790051|gb|AAS77407.1| cadherin-related neuronal receptor 3 [Gallus gallus]
Length = 1000
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 126/274 (45%), Gaps = 55/274 (20%)
Query: 36 NDNHTFALKNPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA 92
N +++L +P+ H ++++ ++ + LV + +DRE ++++ LV+TA+D G A
Sbjct: 163 NAQLSYSL-SPSEHFALDVKSPDDNLKSLFLVLTHPLDRESLSEHRLVLTASD--GGRPA 219
Query: 93 ET---HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD- 148
T + + VLD NDN+P F+Q VY K L + + + + + V+ATD D
Sbjct: 220 LTGTVQLVISVLDANDNAPQFNQSVY-------KVQLPEDAA---EGTLVARVAATDPDV 269
Query: 149 --GDKVAYKL--AVP---SNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPSRY 200
+ +Y + +VP S+ I P+TGE+ LTG +DV ++EL +EA D +P
Sbjct: 270 GFNQEFSYSIVSSVPASQSDAFSIDPRTGEIRLTGPLDFEDVHQHELQIEARDKGTPPLS 329
Query: 201 AR------------EPAQVWL-QFNSPVLQDE------QLLQMIDRKSEAPHRIEKRRVT 241
+VW+ + PV +D LL + DR S RV
Sbjct: 330 GHCSVILEVLDVNDNAPEVWVTSLSVPVPEDAALGTVVALLSVSDRDSG-----PNGRVR 384
Query: 242 RAVRPTKRIDFSETDGEMEGRIVFALEKETEREK 275
AVRP T G L + +RE+
Sbjct: 385 CAVRPPSPFGLVAT---FAGSYSLVLREALDRER 415
>gi|13787217|ref|NP_001438.1| protocadherin Fat 2 precursor [Homo sapiens]
gi|296434503|sp|Q9NYQ8.2|FAT2_HUMAN RecName: Full=Protocadherin Fat 2; Short=hFat2; AltName:
Full=Cadherin family member 8; AltName: Full=Multiple
epidermal growth factor-like domains protein 1;
Short=Multiple EGF-like domains protein 1; Flags:
Precursor
Length = 4349
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 29/223 (13%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G PIL+ S+ P + V Y + +GN + F++ S SG L+ T +D
Sbjct: 1676 GSPILLVSAMS-PSE-VTYELREGNKDGVFSMN------------SYSG-LISTQKKLDH 1720
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E+++ Y L I +++ G + V VD++DENDN+P+F + + VG + +
Sbjct: 1721 EKISSYQLKIRGSNMAGA-FTDVMVVVDIIDENDNAPMFLKSTF---VGQISEAAPLYSM 1776
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EY 185
K ++ + A+D+D + + YK+ P L I P G L + + + + +
Sbjct: 1777 IMDKNNNPFVIHASDSDKEANSLLVYKILEPEALKFFKIDPSMGTLTIVSEMDYESMPSF 1836
Query: 186 ELTVEAHDLQSPSRYAREPAQVWLQF----NSPVLQDEQLLQM 224
+ V HD SP +A PAQV + +SP EQ+ ++
Sbjct: 1837 QFCVYVHDQGSPVLFAPRPAQVIIHVRDVNDSPPRFSEQIYEV 1879
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 79/178 (44%), Gaps = 32/178 (17%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS+ G V L L A + Q+ Y IT+G+ F + E R S+
Sbjct: 2916 VENSEPGELVATLKTLDADISEQNRQVTCY-ITEGDPLGQFGISQ-VGDEWRISSRKT-- 2971
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+DRE A+Y L +TA+D G +A V + VLD NDNSP SQ +Y V
Sbjct: 2972 --------LDREHTAKYLLRVTASD--GKFQASVTVEIFVLDVNDNSPQCSQLLYTGKV- 3020
Query: 121 DLKSSLNSNVSHWKKFSS--IGSVSATDADGD---KVAYKLAVP-SNLVVIVPQTGEL 172
H F I VSATD D D ++ Y L P ++ + P TGEL
Sbjct: 3021 -----------HEDVFPGHFILKVSATDLDTDTNAQITYSLHGPGAHEFKLDPHTGEL 3067
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLV 80
P VRY I G+ + F + +R T+S + LL +RE Y+L+
Sbjct: 65 PQWAVRYRIISGDVANVFKTEEYVVGNFCFLRIRTKSSNTALL------NREVRDSYTLI 118
Query: 81 ITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD---LKSSLNSNVSHWKKFS 137
I AT+ +A T V V +LD+ND P+FS YR + + LK S
Sbjct: 119 IQATEKTLELEALTRVVVHILDQNDLKPLFSPPSYRVTISEDMPLK-------------S 165
Query: 138 SIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTG 176
I V+ATDAD + A Y S + I P +G + + G
Sbjct: 166 PICKVTATDADLGQNAEFYYAFNTRSEMFAIHPTSGVVTVAG 207
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 28/169 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN+ F + E ++G LL + +D E Y L +T D+
Sbjct: 752 YVIADGNEEGCFDI------------ELETG-LLTVAAPLDYEATNFYILNVTVYDLGTP 798
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K+ +TV+V D NDN+P F Y+ + + ++ V ++I ++ DAD
Sbjct: 799 QKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE-----DTEVG-----TTIAELTTKDAD 848
Query: 149 GD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSD-DVEYELTVEAHD 193
+ +V Y L P+ + P TGEL++TG + + Y L VEA D
Sbjct: 849 SEDNGRVRYTLLSPTEKFSLHPLTGELVVTGHLDRESEPRYILKVEARD 897
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 33/205 (16%)
Query: 26 QLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
++V +T N + LK P++ + +++G L+ T+ +D + A Y L I +
Sbjct: 380 RVVMVRVTPAFPNLQYVLK-PSSENVGFKLNARTG-LITTTKLMDFHDRAHYQLHIRTSP 437
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+A T V +D++D N+++P+F++ Y +L+ N+ +S+ +V+AT
Sbjct: 438 ----GQASTVVVIDIVDCNNHAPLFNRSSY-------DGTLDENI---PPGTSVLAVTAT 483
Query: 146 DADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT-------VEAHDLQ 195
D D + V Y +A P L + ++ T P ++YEL V A D
Sbjct: 484 DRDHGENGYVTYSIAGPKALPFSIDPYLGIISTSKP----MDYELMKRIYTFRVRASDWG 539
Query: 196 SPSRYAREPAQVWLQFNSPVLQDEQ 220
SP R +E ++LQ + L D Q
Sbjct: 540 SPFRREKE-VSIFLQLRN--LNDNQ 561
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
+T+ K+GVL VT G +D E ++ + ATD + +E V V V D NDN P FSQ
Sbjct: 2217 TTDFKTGVLTVT-GPLDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQL 2275
Query: 114 VY 115
VY
Sbjct: 2276 VY 2277
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 31/123 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ ++IT GN F + +P T LL T+ +DRE ++ L +T D
Sbjct: 1172 LTFNITSGN-YMGFFMIHPVTG------------LLSTAQQLDRENKDEHILEVTVLDNG 1218
Query: 88 GIN-KAETHVTVDVLDENDNSPVFSQK-----------------VYRFIVGDLKSSLNSN 129
+ K+ + V V +LD NDN P+FS K VYR + DL LN
Sbjct: 1219 EPSLKSTSRVVVGILDVNDNPPIFSHKLFNVRLPERLSPVSPGPVYRLVASDLDEGLNGR 1278
Query: 130 VSH 132
V++
Sbjct: 1279 VTY 1281
>gi|403254095|ref|XP_003919814.1| PREDICTED: protocadherin-16 [Saimiri boliviensis boliviensis]
Length = 3297
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 74/154 (48%), Gaps = 23/154 (14%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+G +D E+ Y L + A D G ++ ++TV V D NDN+P FSQ +Y+ ++
Sbjct: 2333 TGPLDFEQCDHYQLQLLAHD--GPHQGHANLTVLVEDVNDNAPAFSQSLYQVML------ 2384
Query: 126 LNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELL------LTG 176
+ H S+I SVSATD D ++Y LA P++ + P G L G
Sbjct: 2385 ----LEHTPPGSAILSVSATDRDSGANGHISYHLASPADGFTVDPNNGTLFTIVETVALG 2440
Query: 177 DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQ 210
S V ++ +EA D +P R AR V LQ
Sbjct: 2441 HEGSGAV--DVVLEARDHGAPGRAARATVHVQLQ 2472
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 87/204 (42%), Gaps = 20/204 (9%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V + P+ + YS+ Q +++ +P T E+
Sbjct: 1115 ENQPPGTSVGR--VFATDRDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEV---------- 1162
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
T +DRE+ + Y L++ D +++ T V V VLD NDNSP F Q G
Sbjct: 1163 --TTLQTLDREQQSSYQLLVQVQDGGSPSRSTTGTVHVAVLDLNDNSPTFLQ-ASGAAGG 1219
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGELLLTGDP- 178
L + V +++ + + + + Y L P S L + P +GE LLT P
Sbjct: 1220 GLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGE-LLTAAPL 1278
Query: 179 -PSDDVEYELTVEAHDLQSPSRYA 201
++ Y LT+ AHD SP R A
Sbjct: 1279 IRAERPHYVLTLSAHDQGSPPRSA 1302
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 59/131 (45%), Gaps = 25/131 (19%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LV ++++ G+ + F L + SG L + +D E A++ LV+ A
Sbjct: 2632 PHGLVHFAVSSGDPSGLFEL------------DENSGTLRLAHA-LDCETQARHQLVVQA 2678
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G + A VT++V D ND+ P F + L +SL N +++ ++
Sbjct: 2679 ADPAGAHFALAPVTIEVQDVNDHGPAFPLNL-------LSTSLAENQPPGTLVTTLHAI- 2730
Query: 144 ATDADGDKVAY 154
DGD A+
Sbjct: 2731 ----DGDAGAF 2737
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 405 EGGEGH-FAL----------STQDSVIYLVCVARRLDREERDAYNLRVTATDSGSPPLRA 453
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + V D NDN+P F +++YR
Sbjct: 454 EAAFVLHVTDVNDNAPAFDRQLYR 477
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 112/286 (39%), Gaps = 49/286 (17%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV-LLVTSGDIDREEVAQYSLVITA 83
H V YSI GN F L+ S + LV +D E + QY+L + A
Sbjct: 2514 HAAVDYSIVSGNRGQVFQLEPRLAEAGEGSGPGPRALGCLVLLESLDFESLTQYNLTVAA 2573
Query: 84 TD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
D + + VTV VLD NDN PVF+Q YR V + + + + + H V
Sbjct: 2574 ADRGQPPRSSVVPVTVTVLDVNDNPPVFTQASYRVAVPE-DTPVGAELLH---------V 2623
Query: 143 SATDAD-GDKVAYKLAV----PSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHD 193
A+DAD G AV PS L + +G L L + D E ++L V+A D
Sbjct: 2624 EASDADPGPHGLVHFAVSSGDPSGLFELDENSGTLRLAH---ALDCETQARHQLVVQAAD 2680
Query: 194 LQSPSRYAREPAQVWLQ------------FNSPVLQDEQ-------LLQMIDRKSEAPHR 234
+ +A P + +Q S L + Q L ID + A R
Sbjct: 2681 PAG-AHFALAPVTIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGDAGAFGR 2739
Query: 235 IEKRRVTRAVRPTKRIDFS--ETDGEMEGRIVFALEKETEREKFKI 278
+ + P R F+ + GE+ R+ F E E F++
Sbjct: 2740 LRYSLLEAGPGPEGREAFALNSSTGELRARMPFDYEHT---ESFRL 2782
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 10/119 (8%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ TF L E R + LV +G++DRE + Y L + A D
Sbjct: 179 YALSGDGAGETFRL------ETRPGPDGAPVPELVVTGELDRENRSHYMLQLEAYDGGSP 232
Query: 90 -NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+A+ + V +LD ND++P F+Q Y +V + SL + F+S A A
Sbjct: 233 PRRAQALLDVTLLDINDHAPAFNQSRYHAVVSE---SLAPGSPVLQVFASDADAGANGA 288
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 15/93 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y + G D H F L S +G L V +DRE A++ L + A+D
Sbjct: 1579 VSYRLASGGDGH-FRL------------HSSTGALSVVR-PLDRERRAEHVLTVVASDHG 1624
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIV 119
++ T V TV V D ND +P F Q+ Y ++
Sbjct: 1625 SPPRSATQVLTVSVADVNDEAPTFQQQEYSVLL 1657
>gi|311250321|ref|XP_003124098.1| PREDICTED: protocadherin beta-5-like [Sus scrofa]
Length = 785
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 61/122 (50%), Gaps = 21/122 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DREE A+Y++ IT D+ + H +TV V D NDN+P FSQ Y V
Sbjct: 402 LVTERPLDREERAEYNITITVGDLGTPRRHTQHNLTVRVADVNDNAPAFSQPAYTLRV-- 459
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H IG+V ATDAD ++ Y L PS+ LV I P TG+
Sbjct: 460 --RENNSPALH------IGTVRATDADAGANAQLTYSLLPPSDPHLPLASLVAINPDTGQ 511
Query: 172 LL 173
L
Sbjct: 512 LF 513
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 23/132 (17%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
RY+++ + H TH N + + LV +DREE + SL+++A D
Sbjct: 169 RYAVSPNSHFHV------VTH---NRGDGRKFPELVLDKAVDREEQPKLSLILSALDGGA 219
Query: 89 INKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
++ T V ++V+D NDN+P F Q +Y + + S LN+ V+ +VSA D
Sbjct: 220 PPRSGTTAVRIEVVDINDNAPEFLQSLYEVQIPE-NSPLNTLVA---------AVSARDL 269
Query: 148 DG---DKVAYKL 156
D VAY L
Sbjct: 270 DAGTNGNVAYAL 281
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 30/181 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y++ QG++ + + T EIR +D EE +Y++ ITATD
Sbjct: 277 VAYALFQGDEVTQPFVIDELTGEIRLQRA------------LDFEETQRYTVEITATDGG 324
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G++ T V ++V D NDN+P + S+L S+ + + S +D
Sbjct: 325 GLSGKCT-VAIEVEDVNDNAPELTM-----------STLVSSTPENSPETVVAVFSVSDP 372
Query: 148 D-GDKVAYKLAVPSNLVVIVPQTGE--LLLTGDPPSDD---VEYELTVEAHDLQSPSRYA 201
D GD ++ +L ++ T + L + P D EY +T+ DL +P R+
Sbjct: 373 DSGDNGRMVCSIQDDLPFLLKPTFKNFYTLVTERPLDREERAEYNITITVGDLGTPRRHT 432
Query: 202 R 202
+
Sbjct: 433 Q 433
>gi|189236209|ref|XP_971084.2| PREDICTED: similar to AGAP007924-PA [Tribolium castaneum]
Length = 4974
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 98/236 (41%), Gaps = 38/236 (16%)
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
G +DRE+ +Y L + A D G KAET +T+ + D+NDN+P F Y F +L+
Sbjct: 2845 GHLDREQQDEYLLKVAAVD--GAWKAETPLTITIQDQNDNAPEFEHSFYSFNFPELQ--- 2899
Query: 127 NSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELL--------L 174
+ +G V+ATD D ++Y L PS+L + P +G++
Sbjct: 2900 -------RDVVFVGQVAATDRDKQGPNSVISYSLQQPSDLFTVDPASGDIFSKRSLRFKY 2952
Query: 175 TGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQMIDRKSEA 231
T S + Y LT+ A D P + V + N+P + L S
Sbjct: 2953 TQMEASPENMYSLTILATDNGKPPMSSECLVTVNVVDANNNAPKFDKPEYL------SPV 3006
Query: 232 PHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
P ++ ++ V ++DF + I + + E F I N WIT+
Sbjct: 3007 PDDAQEGQLLLKVTAKDKLDFG-----VNAEINYVIVGGNGSENFAIDKYNGWITL 3057
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 116/300 (38%), Gaps = 53/300 (17%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
++ YS+ +G+D H KN +GVL + +DRE Y L + A+D
Sbjct: 1766 VLEYSLIRGDDGHFVLDKN-------------TGVLTLVDS-LDRETKDVYKLTVRASD- 1810
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
G +T +TV + D NDN P F + Y F + + N+ H +G V A D
Sbjct: 1811 -GNQHTDTVLTVQITDTNDNPPAFLETAYSFDIPE-----NAQRGH-----KVGQVKAVD 1859
Query: 147 AD-GDKVAYKLAVPS----NLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRY 200
AD G +V S ++ + PQTG LT ++V+ Y L V+A D P+
Sbjct: 1860 ADLGINAQLTYSVISDWANDVFSLNPQTGVFTLTSRLDYEEVQHYILVVQAQDAGHPALS 1919
Query: 201 AREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEME 260
+ L VL + D S E + + D D
Sbjct: 1920 ST------LTVYCNVLDLNDNTPLFDPMSYTNEIFENVSIATPIVTVSATDLDSGD---N 1970
Query: 261 GRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQA 320
G+IVF + DEN + NG V KK D E G + VT +QA
Sbjct: 1971 GKIVF---------RITAGDENGDFEMTPNGTVITKKELDRERQG---LYNLVVTATDQA 2018
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 49/89 (55%), Gaps = 13/89 (14%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIV 119
LL SG IDRE + Y+L ITA D +G TH + V +LDENDNSPVF K Y
Sbjct: 2101 LLRVSGRIDRETKSNYTLSITARD-RGDPPRATHTKIFVRILDENDNSPVFDPKQY---- 2155
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+S+ N S +S+ VSATD D
Sbjct: 2156 ---SASIAENASIG---ASVLQVSATDVD 2178
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 15/87 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI QGND+ F ++ T ++ S +DRE V+ Y L + A D
Sbjct: 1233 VFYSIVQGNDDGRFTIEEATGQ-------------IILSKILDRETVSNYLLTVVARDAG 1279
Query: 88 GINK--AETHVTVDVLDENDNSPVFSQ 112
+ + + T V+V+V+DENDNSP F+Q
Sbjct: 1280 QMRQLSSTTTVSVEVMDENDNSPEFTQ 1306
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 59/137 (43%), Gaps = 30/137 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI G+ H+F + T + T+ IDRE+ YSL ITA
Sbjct: 814 VTYSIVYGDPEHSFDIDERTGK-------------ITTAKKIDREQTLMYSLTITAR--V 858
Query: 88 GINKAETHVTVDVLDENDNSPVF---------------SQKVYRFIVGDLKSSLNSNVSH 132
G+ +T V V VLD NDN PVF Q+VY DL + +NS V++
Sbjct: 859 GLAYGKTLVNVVVLDLNDNKPVFDRDKDEVKLAENAAVGQEVYLARARDLDAGINSRVTY 918
Query: 133 WKKFSSIGSVSATDADG 149
++ ++A G
Sbjct: 919 HLNYNPDDQFRISEATG 935
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 126/318 (39%), Gaps = 70/318 (22%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN G+ + L + + + P+ ++RY I+ GN+ FA+ + SG
Sbjct: 3113 ENEPLGSTI--LTVNASDDDQGPNGMIRYKISGGNERKEFAV------------DPYSGA 3158
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVG 120
+ + +D + + +Y L ITA D+ ++ T +T+ + D NDNSP F+Q +Y +
Sbjct: 3159 VTILQ-PLDYDTIQEYHLNITAEDLGFKPQSTTAMLTITLTDINDNSPTFNQSIYEAYIS 3217
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLA--VPSNLVVIVPQTGELLLT 175
+ + S + V ATD D K + Y ++ ++ I +TG +
Sbjct: 3218 E----------NLPPNSFVFQVKATDIDSPKNAIIQYSISDGPDKDMFAIDQKTGRVT-- 3265
Query: 176 GDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRI 235
+Y E +DL + + A P +SP+ +L I+ +E
Sbjct: 3266 -------AKYSFDYEENDLYTINIVASNP-------DSPMFGIAELRVHINGVNE----- 3306
Query: 236 EKRRVTRAVRPTKRIDFSET---------------DGEMEGRIVFALEKETEREKFKIRD 280
R ++P D SE+ D +G++ + + F I
Sbjct: 3307 ---YYPRFIQPVFHFDVSESAEVGTQVGTVQATDQDAGDDGKVYYLFVGSSNDRGFNINS 3363
Query: 281 ENPWITVDENGDVRVKKR 298
E+ I+V + D + R
Sbjct: 3364 ESGVISVSRSLDRETQSR 3381
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 18/125 (14%)
Query: 54 STESKSGVL----LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSP 108
+TE K G+ L +DRE+ YSL +TA+D+ +++ V + V+DENDNSP
Sbjct: 1028 NTEGKFGIFPDGFLYVRQSLDREDKDYYSLSVTASDLGNPSRSSVVPVVIHVIDENDNSP 1087
Query: 109 VFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLAVPSNLVVI 165
F+ + F + + + S +G ++ATD D + A + L+ + VI
Sbjct: 1088 EFTNASFSFNIRE----------NEPPDSFVGKLTATDRDIGRNAELIFSLSNSQSDFVI 1137
Query: 166 VPQTG 170
P+ G
Sbjct: 1138 DPKNG 1142
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 63/145 (43%), Gaps = 19/145 (13%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN + F L N S + L T+G +DRE Y L I+A D
Sbjct: 167 YRIIDGNKDDKFRLA-----LTVNPAGETSYLHLETTGKLDRESQGFYFLNISARDGGAP 221
Query: 90 NK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K V V +LD NDN P+F Y IV SLN +V + + V ATD D
Sbjct: 222 PKFGYLQVNVTILDVNDNPPIFDHSDY--IV-----SLNESVLPG---TPVLQVMATDND 271
Query: 149 -GD--KVAYKLAVPSNLVVIVPQTG 170
GD K+ Y LA + P+TG
Sbjct: 272 LGDNAKITYYLADTERQFTVDPETG 296
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
++ TS +DREE Y + A D A ++T+ V DENDNSP FS Y +
Sbjct: 2422 IITTSAILDREETEIYYFTVMAQDCSATEPRAAAVNLTITVTDENDNSPSFSSTKYEVNI 2481
Query: 120 GD 121
D
Sbjct: 2482 SD 2483
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 13/85 (15%)
Query: 66 SGDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLK 123
+G +DREE+++Y+L + ATD KG A + + V D ND+ PVF + Y I+ +L
Sbjct: 423 NGVLDREEISKYNLTVVATD-KGTPPRTATAFLIIHVNDVNDHEPVFEKSEYSAILSELA 481
Query: 124 SSLNSNVSHWKKFSSIGSVSATDAD 148
S + + ++ATD D
Sbjct: 482 PS----------GTYVAGITATDED 496
>gi|119582077|gb|EAW61673.1| FAT tumor suppressor homolog 2 (Drosophila) [Homo sapiens]
Length = 4349
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 29/223 (13%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G PIL+ S+ P + V Y + +GN + F++ S SG L+ T +D
Sbjct: 1676 GSPILLVSAMS-PSE-VTYELREGNKDGVFSMN------------SYSG-LISTQKKLDH 1720
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E+++ Y L I +++ G + V VD++DENDN+P+F + + VG + +
Sbjct: 1721 EKISSYQLKIRGSNMAGA-FTDVMVVVDIIDENDNAPMFLKSTF---VGQISEAAPLYSM 1776
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EY 185
K ++ + A+D+D + + YK+ P L I P G L + + + + +
Sbjct: 1777 IMDKNNNPFVIHASDSDKEANSLLVYKILEPEALKFFKIDPSMGTLTIVSEMDYESMPSF 1836
Query: 186 ELTVEAHDLQSPSRYAREPAQVWLQF----NSPVLQDEQLLQM 224
+ V HD SP +A PAQV + +SP EQ+ ++
Sbjct: 1837 QFCVYVHDQGSPVLFAPRPAQVIIHVRDVNDSPPRFSEQIYEV 1879
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 79/178 (44%), Gaps = 32/178 (17%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS+ G V L L A + Q+ Y IT+G+ F + E R S+
Sbjct: 2916 VENSEPGELVATLKTLDADISEQNRQVTCY-ITEGDPLGQFGISQ-VGDEWRISSRKT-- 2971
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+DRE A+Y L +TA+D G +A V + VLD NDNSP SQ +Y V
Sbjct: 2972 --------LDREHTAKYLLRVTASD--GKFQASVTVEIFVLDVNDNSPQCSQLLYTGKV- 3020
Query: 121 DLKSSLNSNVSHWKKFSS--IGSVSATDADGD---KVAYKLAVP-SNLVVIVPQTGEL 172
H F I VSATD D D ++ Y L P ++ + P TGEL
Sbjct: 3021 -----------HEDVFPGHFILKVSATDLDTDTNAQITYSLHGPGAHEFKLDPHTGEL 3067
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLV 80
P VRY I G+ + F + +R T+S + LL +RE Y+L+
Sbjct: 65 PQWAVRYRIISGDVANVFKTEEYVVGNFCFLRIRTKSSNTALL------NREVRDSYTLI 118
Query: 81 ITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD---LKSSLNSNVSHWKKFS 137
I AT+ +A T V V +LD+ND P+FS YR + + LK S
Sbjct: 119 IQATEKTLELEALTRVVVHILDQNDLKPLFSPPSYRVTISEDMPLK-------------S 165
Query: 138 SIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTG 176
I V+ATDAD + A Y S + I P +G + + G
Sbjct: 166 PICKVTATDADLGQNAEFYYAFNTRSEMFAIHPTSGVVTVAG 207
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 28/169 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN+ F + E ++G LL + +D E Y L +T D+
Sbjct: 752 YVIADGNEEGCFDI------------ELETG-LLTVAAPLDYEATNFYILNVTVYDLGTP 798
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K+ +TV+V D NDN+P F Y+ + + ++ V ++I ++ DAD
Sbjct: 799 QKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE-----DTEVG-----TTIAELTTKDAD 848
Query: 149 GD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSD-DVEYELTVEAHD 193
+ +V Y L P+ + P TGEL++TG + + Y L VEA D
Sbjct: 849 SEDNGRVRYTLLSPTEKFSLHPLTGELVVTGHLDRESEPRYILKVEARD 897
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 33/205 (16%)
Query: 26 QLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
++V +T N + LK P++ + +++G L+ T+ +D + A Y L I +
Sbjct: 380 RVVMVRVTPAFPNLQYVLK-PSSENVGFKLNARTG-LITTTKLMDFHDRAHYQLHIRTSP 437
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+A T V +D++D N+++P+F++ Y +L+ N+ +S+ +V+AT
Sbjct: 438 ----GQASTVVVIDIVDCNNHAPLFNRSSY-------DGTLDENI---PPGTSVLAVTAT 483
Query: 146 DADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT-------VEAHDLQ 195
D D + V Y +A P L + ++ T P ++YEL V A D
Sbjct: 484 DRDHGENGYVTYSIAGPKALPFSIDPYLGIISTSKP----MDYELMKRIYTFRVRASDWG 539
Query: 196 SPSRYAREPAQVWLQFNSPVLQDEQ 220
SP R +E ++LQ + L D Q
Sbjct: 540 SPFRREKE-VSIFLQLRN--LNDNQ 561
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 31/123 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ ++IT GN + F + +P T LL T+ +DRE ++ L +T D
Sbjct: 1172 LTFNITSGN-HMGFFMIHPVTG------------LLSTAQQLDRENKDEHILEVTVLDNG 1218
Query: 88 GIN-KAETHVTVDVLDENDNSPVFSQK-----------------VYRFIVGDLKSSLNSN 129
+ K+ + V V +LD NDN P+FS K VYR + DL LN
Sbjct: 1219 EPSLKSTSRVVVGILDVNDNPPIFSHKLFNVRLPERLSPVSPGPVYRLVASDLDEGLNGR 1278
Query: 130 VSH 132
V++
Sbjct: 1279 VTY 1281
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
+T+ K+GVL VT G +D E ++ + ATD + +E V V V D NDN P FSQ
Sbjct: 2217 TTDFKTGVLTVT-GPLDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQL 2275
Query: 114 VY 115
VY
Sbjct: 2276 VY 2277
>gi|7407144|gb|AAF61928.1|AF231022_1 protocadherin Fat 2 [Homo sapiens]
Length = 4349
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 105/223 (47%), Gaps = 29/223 (13%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G PIL+ S+ P + V Y + +GN + F++ S SG L+ T +D
Sbjct: 1676 GSPILLVSAMS-PSE-VTYELREGNKDGVFSMN------------SYSG-LISTQKKLDH 1720
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E+++ Y L I +++ G + V VD++DENDN+P+F + + VG + +
Sbjct: 1721 EKISSYQLKIRGSNMAGA-FTDVMVVVDIIDENDNAPMFLKSTF---VGQISEAAPLYSM 1776
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EY 185
K ++ + A+D+D + + YK+ P L I P G L + + + + +
Sbjct: 1777 IMDKNNNPFVIHASDSDKEANSLLVYKILEPEALKFFKIDPSMGTLTIVSEMDYESMPSF 1836
Query: 186 ELTVEAHDLQSPSRYAREPAQVWLQF----NSPVLQDEQLLQM 224
+ V HD SP +A PAQV + +SP EQ+ ++
Sbjct: 1837 QFCVYVHDQGSPVLFAPRPAQVIIHVRDVNDSPPRFSEQIYEV 1879
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 79/178 (44%), Gaps = 32/178 (17%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS+ G V L L A + Q+ Y IT+G+ F + E R S+
Sbjct: 2916 VENSEPGELVATLKTLDADISEQNRQVTCY-ITEGDPLGQFGISQ-VGDEWRISSRKT-- 2971
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+DRE A+Y L +TA+D G +A V + VLD NDNSP SQ +Y V
Sbjct: 2972 --------LDREHTAKYLLRVTASD--GKFQASVTVEIFVLDVNDNSPQCSQLLYTGKV- 3020
Query: 121 DLKSSLNSNVSHWKKFSS--IGSVSATDADGD---KVAYKLAVP-SNLVVIVPQTGEL 172
H F I VSATD D D ++ Y L P ++ + P TGEL
Sbjct: 3021 -----------HEDVFPGHFILKVSATDLDTDTNAQITYSLHGPGAHEFKLDPHTGEL 3067
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLV 80
P VRY I G+ + F + +R T+S + LL +RE Y+L+
Sbjct: 65 PQWAVRYRIISGDVANVFKTEEYVVGNFCFLRIRTKSSNTALL------NREVRDSYTLI 118
Query: 81 ITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD---LKSSLNSNVSHWKKFS 137
I AT+ +A T V V +LD+ND P+FS YR + + LK S
Sbjct: 119 IQATEKTLELEALTRVVVHILDQNDLKPLFSPPSYRVTISEDMPLK-------------S 165
Query: 138 SIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTG 176
I V+ATDAD + A Y S + I P +G + + G
Sbjct: 166 PICKVTATDADLGQNAEFYYAFNTRSEMFAIHPTSGVVTVAG 207
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 28/169 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN+ F + E ++G LL + +D E Y L +T D+
Sbjct: 752 YVIADGNEEGCFDI------------ELETG-LLTVAAPLDYEATNFYILNVTVYDLGTP 798
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K+ +TV+V D NDN+P F Y+ + + ++ V ++I ++ DAD
Sbjct: 799 QKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE-----DTEVG-----TTIAELTTKDAD 848
Query: 149 GD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSD-DVEYELTVEAHD 193
+ +V Y L P+ + P TGEL++TG + + Y L VEA D
Sbjct: 849 SEDNGRVRYTLLSPTEKFSLHPLTGELVVTGHLDRESEPRYILKVEARD 897
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 33/205 (16%)
Query: 26 QLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
++V +T N + LK P++ + +++G L+ T+ +D + A Y L I +
Sbjct: 380 RVVMVRVTPAFPNLQYVLK-PSSENVGFKLNARTG-LITTTKLMDFHDRAHYQLHIRTSP 437
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+A T V +D++D N+++P+F++ Y +L+ N+ +S+ +V+AT
Sbjct: 438 ----GQASTVVVIDIVDCNNHAPLFNRSSY-------DGTLDENI---PPGTSVLAVTAT 483
Query: 146 DADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT-------VEAHDLQ 195
D D + V Y +A P L + ++ T P ++YEL V A D
Sbjct: 484 DRDHGENGYVTYSIAGPKALPFSIDPYLGIISTSKP----MDYELMKRIYTFRVRASDWG 539
Query: 196 SPSRYAREPAQVWLQFNSPVLQDEQ 220
SP R +E ++LQ + L D Q
Sbjct: 540 SPFRREKE-VSIFLQLRN--LNDNQ 561
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
+T+ K+GVL VT G +D E ++ + ATD + +E V V V D NDN P FSQ
Sbjct: 2217 TTDFKTGVLTVT-GPLDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQL 2275
Query: 114 VY 115
VY
Sbjct: 2276 VY 2277
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 31/123 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ ++IT GN F + +P T LL T+ +DRE ++ L +T D
Sbjct: 1172 LTFNITSGN-YMGFFMIHPVTG------------LLSTAQQLDRENKDEHILEVTVLDNG 1218
Query: 88 GIN-KAETHVTVDVLDENDNSPVFSQK-----------------VYRFIVGDLKSSLNSN 129
+ K+ + V V +LD NDN P+FS K VYR + DL LN
Sbjct: 1219 EPSLKSTSRVVVGILDVNDNPPIFSHKLFNVRLPERLSPVSPGPVYRLVASDLDEGLNGR 1278
Query: 130 VSH 132
V++
Sbjct: 1279 VTY 1281
>gi|326916835|ref|XP_003204710.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16-like [Meleagris
gallopavo]
Length = 3001
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 84/171 (49%), Gaps = 26/171 (15%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+ G + +G +D E+ + YSL + A+D + ++ E ++TV V D NDN+P FSQ Y+
Sbjct: 2028 RYGGRIALTGPLDYEQRSHYSLTLRASDSR--HETEANLTVIVEDVNDNAPAFSQAFYQV 2085
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGELLL 174
+ + H S + ++SATD D ++ + LAVPS V I P G L
Sbjct: 2086 TLPE----------HTPAGSILLTMSATDMDSGSNGEITFHLAVPSLDVAIDPSNGT-LF 2134
Query: 175 TGDPPSDDVE---YELTVEAHDLQSPSRYAREPAQVWLQF-----NSPVLQ 217
T P D EL VEA D SPS + A V LQ +SP+ Q
Sbjct: 2135 TIRPVEFDANQPTLELVVEARDHGSPSLSSW--ATVQLQVLDVNDHSPIFQ 2183
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 16/94 (17%)
Query: 60 GVL---LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDV--LDENDNSPVFSQKV 114
GVL LV S +DRE + YSLV+ A D G + +T+DV D NDN+P F+Q
Sbjct: 177 GVLYLDLVVSNVLDRENRSSYSLVLEAYD-GGSPPRSSQMTLDVSVQDINDNAPTFNQSR 235
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
Y ++ + + K SSI V A+DAD
Sbjct: 236 YHTLISE----------NLKPGSSILQVFASDAD 259
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 16/106 (15%)
Query: 12 GLPILVASSH---KHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G +L ++H P V Y+I+ G+ + F +I ST + L +
Sbjct: 2314 GTELLRVTAHDADSGPRGHVHYTISSGDQHGLF--------QIHESTGA-----LCLARP 2360
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKV 114
+DRE A ++LV+ A DV G + A V ++V D NDN P F +V
Sbjct: 2361 LDRETQALHALVVQAMDVPGGHFALVPVAIEVKDVNDNKPYFPVEV 2406
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVY 115
SGVL T+ +DRE+VA YSL + D ++ T V V VLD NDN+P F+Q Y
Sbjct: 1497 SGVL-STARALDREQVAFYSLTVVVQDHGTPPRSATMSVNVQVLDLNDNAPGFAQASY 1553
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 20/125 (16%)
Query: 57 SKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH------VTVDVLDENDNSPVF 110
S+SG L V S +DRE Y L + A+ G + E V + + DENDNSP
Sbjct: 1025 SESGWLYVKSA-LDRETRDLYVLTVLASAGGGGSGGEARKTGTSTVRISITDENDNSPRL 1083
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVP 167
S++ Y F V + + SS+G V A+D D ++ Y+L + +I
Sbjct: 1084 SEERYFFTVPE----------NQAPGSSVGRVMASDRDAGQNSRLTYRLLQHDSNFLIHT 1133
Query: 168 QTGEL 172
QTGEL
Sbjct: 1134 QTGEL 1138
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYR 116
+DREE Y L +TATD G +AE+ + V+D NDN P+F Q+ Y+
Sbjct: 406 LDREERDSYDLRVTATD-SGTPPLRAESTFVLQVIDINDNPPLFDQQEYK 454
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 20/148 (13%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
L+VT+ +DREE Q+ L++ A D G+ N ++ V + V DEND++P +
Sbjct: 1395 LIVTTHPLDREEQEQHVLMVYARD-GGLPPNLSKATVRITVGDENDHTPQLESE------ 1447
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA--VPSNLVVIVPQTGELLL 174
S + V + ++ ++ ATD DGD ++ Y++A P ++ P +G L
Sbjct: 1448 -----SCSVEVPENQSRVALYTLRATDPDGDENGRLEYRVADGDPEQDFILDPVSGVLST 1502
Query: 175 TGDPPSDDVE-YELTVEAHDLQSPSRYA 201
+ V Y LTV D +P R A
Sbjct: 1503 ARALDREQVAFYSLTVVVQDHGTPPRSA 1530
>gi|432093130|gb|ELK25388.1| Protocadherin-16 [Myotis davidii]
Length = 3060
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+G +D E+ +Y L + A D G ++ ++TV V D NDN+PVFSQ +Y+ +
Sbjct: 2111 TGPLDFEQCDRYHLQLLAHD--GPHEGRANLTVLVEDVNDNAPVFSQSLYQVTL------ 2162
Query: 126 LNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDD 182
+ H S+I SVSATD D ++Y LA P+ + P G L T +
Sbjct: 2163 ----LEHTPPGSAILSVSATDRDSGANGHISYHLASPAEGFSVDPNNGTLFTTAGTVALG 2218
Query: 183 VE----YELTVEAHDLQSPSRYAREPAQVWLQ 210
E ++ +EA D P R AR V LQ
Sbjct: 2219 HEGLGVVDVVLEARDHGMPGRAARATVHVQLQ 2250
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 48/103 (46%), Gaps = 14/103 (13%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL-------LVTSGDIDREEVAQY 77
H V YSI GN F L E R + +SG L LV +D E + QY
Sbjct: 2292 HATVDYSIVSGNRGRVFQL------EPRLAEAGESGGLGPQALGCLVLLEPLDFESLTQY 2345
Query: 78 SLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+L + A D + + VTV VLD NDN PVF++ YR V
Sbjct: 2346 NLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRVAV 2388
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 104/273 (38%), Gaps = 53/273 (19%)
Query: 43 LKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDV 100
L P++ E+R +T +DRE+ + YS ++A D T VT+ V
Sbjct: 1680 LLEPSSGELRTATA------------LDREQCSSYSFSVSAVDGAAAGPLSTTVPVTITV 1727
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA 157
D ND++P F R + SL++ ++ ++ A D D + Y+LA
Sbjct: 1728 RDVNDHAPTFPSSPLRLRLPRPGPSLSTPT------LALATLRAEDRDAGANASILYRLA 1781
Query: 158 -VPSNLVVIVPQTGELLLTGDP----PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFN 212
P + TGE+ +T P P D V L + A DL P+R A V LQ
Sbjct: 1782 GTPPPGTTVDSYTGEIRVTRSPVGLGPRDRV---LFIVATDLGRPARSATGVVIVGLQGE 1838
Query: 213 SPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSET---DGEMEGRIVFALEK 269
S +R P R V R P S G G I +++
Sbjct: 1839 S------------ERGPRFP-RASGEAVLRENAPPGTPIASPKAVHTGGSNGPITYSILS 1885
Query: 270 ETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
E+ F I+ IT VR+ + DFE
Sbjct: 1886 GNEKGTFSIQPNTGAIT------VRLAEGLDFE 1912
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 6/135 (4%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE + Y L++ D ++ T V + VLD NDNSP F Q G L +
Sbjct: 1166 LDRERQSSYQLLVRVQDGGSPPRSATGTVHIAVLDLNDNSPTFLQ-ASGAAGGGLPIQVP 1224
Query: 128 SNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGELLLTGDP--PSDDVE 184
V +++ + + + + Y L P S L + P +GE LLT P ++
Sbjct: 1225 DRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGE-LLTAAPLIRAERPH 1283
Query: 185 YELTVEAHDLQSPSR 199
Y LT+ AHD SP R
Sbjct: 1284 YVLTLSAHDQGSPPR 1298
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 25/131 (19%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LVR++++ G+ F L + SG L + +D E A++ LV+ A
Sbjct: 2410 PHGLVRFTLSSGDPAGLFEL------------DESSGALRLAR-PLDCETQARHQLVVQA 2456
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G + A VT++V D ND+ P F + L +SL N +++ ++
Sbjct: 2457 ADPVGAHFALAPVTIEVQDVNDHGPAFPLSL-------LSTSLAENQPPGTLVTTLHAI- 2508
Query: 144 ATDADGDKVAY 154
DGD A+
Sbjct: 2509 ----DGDAGAF 2515
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 11/90 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGI-NKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +GD+DRE + Y L + A D +A+ + V +LD ND++P F+Q Y +V +
Sbjct: 204 LVITGDLDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAVVSE 263
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK 151
S + V A+DAD D
Sbjct: 264 ----------SLAPGSPVLQVYASDADADA 283
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 403 EGGEGH-FAL----------STQDSVIYLVCVARQLDREERDAYNLRVTATDSGSPPLRA 451
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + V D NDN P F +++YR
Sbjct: 452 EAAFVLHVTDVNDNVPAFDRQLYR 475
>gi|431913398|gb|ELK15073.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Pteropus alecto]
Length = 2408
Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 81/280 (28%), Positives = 119/280 (42%), Gaps = 53/280 (18%)
Query: 42 ALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDV 100
AL N + E+ S +++SG L+ T +DRE + ++ L +TA D A T V V V
Sbjct: 116 ALMNSRSLELF-SIDAQSG-LIRTEAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTV 173
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLA 157
+D ND+SPVF Q YR +L NV ++ I + ATD D A Y+
Sbjct: 174 VDRNDHSPVFEQAQYR-------ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFV 223
Query: 158 VPSNLVV-------IVPQTGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVW 208
PS I P++G + +G + +E YEL VEA D Q P P
Sbjct: 224 GPSAARAAAAAAFEIDPRSGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSAT 278
Query: 209 LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGR 262
++ + VL D AP EKR V + VRP R+ ++ D + G
Sbjct: 279 VRVHITVL---------DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGL 329
Query: 263 IVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ + + R F I G+++V DFE
Sbjct: 330 VHYNIISGNSRGHFAID--------SLTGEIQVVAPLDFE 361
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 239 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 297
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 298 KRY---VAQVREDV-------RPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDS 347
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 348 LTGEIQVVA--PLDFEAEREYALRIRAQDAGRP 378
Score = 42.7 bits (99), Expect = 0.25, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 30/179 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 828 ENSIVGSVVA--QITAVDPDEGPNAHIMYQIVEGNIPELFQM------------DIFSGE 873
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIV 119
L D+D E +Y +V+ AT +++A HV + +D+NDNSPV + Q ++ V
Sbjct: 874 LTALI-DLDYEARQEYVIVVQATSAPLVSRATVHVRL--VDQNDNSPVLNNFQILFNNYV 930
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
+ + S + IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 931 SNRSDTFPSGI--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 981
Score = 41.6 bits (96), Expect = 0.51, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y
Sbjct: 461 SGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHL------- 513
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
LN + + +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 514 RLNEDAA---VGTSVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGIGLVTLALPLD 570
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 571 YKQERYFKLVLTASD 585
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 315 LRVTATDRDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVVA-PLDFE 361
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y+L I A D ++ ++ V+D ND++P+F ++ V + + L +V
Sbjct: 362 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLE-NAPLGHSV 420
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL-AVPSNL-VVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L V S+ VI TG + ++G + VE Y
Sbjct: 421 IH------IQAVDADHGENARLEYSLTGVASDTPFVINSATGWVSVSGPLDRESVEHYFF 474
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 475 GVEARDHGSP 484
Score = 39.7 bits (91), Expect = 1.9, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 33/203 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ GT V + V + + + + Y IT GN + FA+ ++ G+
Sbjct: 517 EDAAVGTSV----VSVTAVDRDANSAISYQITGGNTRNRFAI------------STQGGI 560
Query: 62 LLVTSG-DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +D ++ + LV+TA+D + ++ HV +++ D N + PVF Y V
Sbjct: 561 GLVTLALPLDYKQERYFKLVLTASD-RALHD-HCHVHINITDANTHRPVFQSAHYSVSVN 618
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL--VVIVPQTGELLLTGD 177
+ + S++ +SA+D D G+ + NL I +G + L
Sbjct: 619 EDRPV----------GSTVVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAT 668
Query: 178 PPSDD-VEYELTVEAHDLQSPSR 199
+D V Y L + A D P +
Sbjct: 669 LDYEDQVTYTLAITARDNGIPQK 691
Score = 38.5 bits (88), Expect = 3.8, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKV 114
++ SG + + + +D E+ Y+L ITA D KA+T +V V V D NDN+P F
Sbjct: 657 DADSGAITLQA-TLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASH 715
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
Y +V + F+S+ +SATD D
Sbjct: 716 YTGLVSE----------DAPPFTSVLQISATDRDA 740
Score = 38.5 bits (88), Expect = 4.2, Method: Composition-based stats.
Identities = 58/218 (26%), Positives = 86/218 (39%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 731 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 778
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+ Y L A D +G+ T V++ V D NDN+PVF + + V + NS V
Sbjct: 779 AMPVYELTAYAVD-RGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE-----NSIV 832
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 833 G-----SVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 887
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 888 YVIVVQATSAPLVSRATVHVRLVDQNDNSPVLNNFQIL 925
>gi|194758613|ref|XP_001961556.1| GF14875 [Drosophila ananassae]
gi|190615253|gb|EDV30777.1| GF14875 [Drosophila ananassae]
Length = 3563
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 102/215 (47%), Gaps = 23/215 (10%)
Query: 69 IDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE +Y L + ATD A+ V + VLD NDN P F + Y F + +
Sbjct: 1107 LDRETRDRYQLTVLATDNGTPAAHAKARVVIRVLDANDNDPKFQRTKYEFRIEE------ 1160
Query: 128 SNVSHWKKFSSIGSVSATDAD-GDKVA--YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE 184
+ ++ S +G V+ATD D G+ A Y L ++ + P TGE + T +P ++
Sbjct: 1161 ----NLRRGSVVGVVTATDLDLGENAAVRYSLLTANSSFQVHPVTGE-ISTREPLDRELR 1215
Query: 185 --YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHR--IEK 237
YEL VEA D +P R AR P + + NSP + D Q + R+ + P +
Sbjct: 1216 EMYELIVEARDQGTPVRSARVPVSIRVTDVNDNSPEIADPQEDVVSVREEQPPGTEVVRI 1275
Query: 238 RRVTRAVRPTKRIDFSETDG-EMEGRIVFALEKET 271
R + R I +S G + +G +F+++ +T
Sbjct: 1276 RAIDRDNGQNASITYSIVKGRDSDGHGLFSIDPKT 1310
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 61/133 (45%), Gaps = 25/133 (18%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL---LVTSGDIDREEVAQYSLV 80
P +Y+I GN N F L +S + GVL L SG +DRE YSL+
Sbjct: 202 PFNTQKYNIVSGNVNDAFRL---------SSHRERDGVLYLDLQISGFLDRETTPGYSLL 252
Query: 81 ITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS 138
I A D G +TV++ D NDN P+F+Q Y V + N+ V +S
Sbjct: 253 IEALD-GGSPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPE-----NATVG-----TS 301
Query: 139 IGSVSATDADGDK 151
+ V A+D D D+
Sbjct: 302 VLQVYASDTDADE 314
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 62/116 (53%), Gaps = 12/116 (10%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+ + D E+ +Y L + A+D+ G KA V +++ +++ +P F+++ YRF+
Sbjct: 2929 LMTSDAVFDYEQRQRYDLQLEASDMGG-KKARVGVRIEIESKDEFAPQFTERTYRFV--- 2984
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGELLL 174
L + V+ + F +G V+ATD D +V Y+L+ P + + +G +L+
Sbjct: 2985 ----LPAAVALPQGF-VVGQVTATDGDSGPDGRVVYQLSAPHSNFKVNRSSGAILI 3035
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFS 111
+ +S SG L+ T G +DRE A YS ++ ATD + A V + VLD NDN PVF
Sbjct: 1999 AIDSSSG-LITTIGKLDRELQASYSFMVVATDGGRYEVRSASVPVQIHVLDVNDNRPVFE 2057
Query: 112 QKVY 115
+ Y
Sbjct: 2058 RYPY 2061
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 50/215 (23%)
Query: 12 GLPILVASSHKH---PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G P+ A +H V YS+ + + F++ + H LV S
Sbjct: 944 GAPLYAAHAHDRDSGSSGQVTYSLARDSGKRLFSIDARSGH-------------LVLSHH 990
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +++L +TATD GI +++T+ DV D NDN PVF ++ Y F+
Sbjct: 991 LDYETSQRHTLTVTATD-GGIPPLSSNLTILLDVQDVNDNPPVFEREEY-FV-------- 1040
Query: 127 NSNVSHWKKFSS-IGSVSATDAD---GDKVAYKL--AVPSNLVV-----------IVPQT 169
NVS + ++ I V+A+D D ++ Y++ A N+ I P +
Sbjct: 1041 --NVSESRSINTQIIQVNASDLDTGNNARITYRIVDAGVDNVTTSSSSDVAQHFGIFPNS 1098
Query: 170 GELLLTG--DPPSDDVEYELTVEAHDLQSPSRYAR 202
G + L D + D Y+LTV A D +P+ +A+
Sbjct: 1099 GWIYLRALLDRETRD-RYQLTVLATDNGTPAAHAK 1132
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 29/139 (20%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + YSI GN + F S +++SG L V +DRE+ ++Y+L + A
Sbjct: 1877 PNADLVYSIAAGNLGNKF------------SIDARSGELRVQP--LDREQHSRYTLQVQA 1922
Query: 84 TDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
D + H +TV V D+NDN+P RF + +S+ + + +
Sbjct: 1923 ADRGKPTSRQGHCNITVFVEDQNDNAP-------RFELSKYTASVQEDAPPGTR---VAQ 1972
Query: 142 VSATDAD---GDKVAYKLA 157
++A+DAD ++ Y LA
Sbjct: 1973 ITASDADLGVNARLVYSLA 1991
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 14/83 (16%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN--KA 92
G D H FAL +T S L++ + +DRE V+ Y+L + ATD KG A
Sbjct: 436 GGDGH-FAL----------TTRDNSIYLVIVNLPLDREMVSNYTLSVVATD-KGTPPLHA 483
Query: 93 ETHVTVDVLDENDNSPVFSQKVY 115
+ + + D NDN P F Q +Y
Sbjct: 484 SKSIFLKITDVNDNPPEFEQDLY 506
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 80/186 (43%), Gaps = 42/186 (22%)
Query: 19 SSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYS 78
++H+ P +RYSI G+ + F S E+ SG + + +D E +Q
Sbjct: 853 TAHRSP---MRYSIYSGDPDGYF------------SIEANSGNIRIAK-PLDHEAKSQVL 896
Query: 79 LVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV---GDLKSSLNSNVSHWKK 135
L I AT + T V ++V D NDN+P F + R V +L + L + +H +
Sbjct: 897 LNIQATVGEPPVYGHTQVNIEVEDVNDNAPEFETNMVRISVPENAELGAPLYAAHAHDRD 956
Query: 136 FSSIGSVSATDADGDKVAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVEYE------L 187
S G +V Y LA S L I ++G L+L S ++YE L
Sbjct: 957 SGSSG----------QVTYSLARDSGKRLFSIDARSGHLVL-----SHHLDYETSQRHTL 1001
Query: 188 TVEAHD 193
TV A D
Sbjct: 1002 TVTATD 1007
>gi|195159445|ref|XP_002020589.1| GL15349 [Drosophila persimilis]
gi|194117539|gb|EDW39582.1| GL15349 [Drosophila persimilis]
Length = 1812
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 83/161 (51%), Gaps = 20/161 (12%)
Query: 69 IDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE +Y LVI ATD A T V V VLD NDN P F + Y F + +
Sbjct: 1101 LDRETRDRYQLVILATDNGTPAAHARTRVLVRVLDANDNDPRFLRPQYEFRIEE------ 1154
Query: 128 SNVSHWKKFSSIGSVSATDAD-GDKVAYKLA-VPSNLVVIV-PQTGELLLTGDPPSDDVE 184
+ ++ S +G+V+A D D G+ A + + +P+N V P TGE + T +P ++
Sbjct: 1155 ----NLRRGSVVGAVAARDLDLGENAAIRYSLLPANSSFQVHPVTGE-ISTREPLDRELR 1209
Query: 185 --YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQ 220
Y+L VEA D +P R AR P +V + N+P + D Q
Sbjct: 1210 ALYDLVVEARDQGTPVRSARVPVRVHVSDVNDNAPEIADPQ 1250
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 75/166 (45%), Gaps = 38/166 (22%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL---LVTSGDIDREEVAQYSLV 80
P+ RY+I GN N F L +S + GVL L SG +DRE YSL+
Sbjct: 194 PYNTQRYNIVSGNVNDAFRL---------SSHRERDGVLYLDLQISGFLDRETTPGYSLL 244
Query: 81 ITATD-----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK 135
I A D ++G+ V + + D NDN P+F+Q Y V + N+ V
Sbjct: 245 IEALDGGTPPLRGL----MTVNITIQDVNDNQPIFNQSRYFATVPE-----NATVG---- 291
Query: 136 FSSIGSVSATDADGDK---VAYKL----AVPSNLVVIVPQTGELLL 174
+S+ V A+D D ++ V Y + + + I PQTG + +
Sbjct: 292 -TSVLQVYASDTDAEENGLVEYAINRRQSDKEQMFRIDPQTGAIFI 336
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 77/179 (43%), Gaps = 35/179 (19%)
Query: 19 SSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYS 78
++H+ P VRYSI G+ + F + E SG + + +D E Q
Sbjct: 845 TAHRSP---VRYSIYSGDPDGYFGI------------EGGSGNIRIAR-PLDHEAKGQVL 888
Query: 79 LVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV---GDLKSSLNSNVSHWKK 135
L I AT + T V ++V D NDN+P F + R V DL + L + +H K
Sbjct: 889 LNIQATAGEPPVYGHTQVNIEVEDVNDNAPEFEASLVRISVPENADLGAPLYAAHAHDKD 948
Query: 136 FSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDL 194
S G +V Y LA L I P++G L+L S ++YE T + H L
Sbjct: 949 SGSSG----------QVTYSLARERQLFAIDPRSGHLVL-----SQHLDYE-TSQRHTL 991
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 18/100 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVT--VDVLDENDNSPVFSQKVYRFIVG 120
LV S +D E +++LV+TATD G+ T++T VDV D NDN PVF + Y
Sbjct: 975 LVLSQHLDYETSQRHTLVVTATD-GGVPPLATNLTILVDVQDVNDNPPVFERDEYAV--- 1030
Query: 121 DLKSSLNSNVSHWKKFSS-IGSVSATDAD---GDKVAYKL 156
NVS + +S I V+ATD D ++ Y++
Sbjct: 1031 --------NVSESRPVNSQIVQVNATDLDTGNNARITYRI 1062
>gi|242014336|ref|XP_002427847.1| protocadherin-16 precursor, putative [Pediculus humanus corporis]
gi|212512316|gb|EEB15109.1| protocadherin-16 precursor, putative [Pediculus humanus corporis]
Length = 5078
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 119/281 (42%), Gaps = 44/281 (15%)
Query: 36 NDNHTFAL-KNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET 94
N N T++ +NP + S + SG + V +G +DRE +Y L + A D G ++ET
Sbjct: 2850 NANATYSFTENPGN---KFSLDPLSGNVTV-AGPLDRETQDEYLLKVAAFD--GAWRSET 2903
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GD 150
+T+ + D+NDN+P F Y F + +SS+ +G V ATD D
Sbjct: 2904 PLTITIQDQNDNAPEFEHFDYSFNFPESQSSV----------IFVGQVIATDRDKHGANS 2953
Query: 151 KVAYKLAVPSNLVVIVPQTGELL--------LTGDPPSDDVEYELTVEAHDLQSPSRYAR 202
++Y L PS++ I P +GE+ T S + +Y LTV A D P +
Sbjct: 2954 VISYSLKHPSDIFTIDPASGEIFSKRPLRYKYTALEHSPENQYTLTVLATDNGKPPMSSE 3013
Query: 203 EPAQVWL---QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEM 259
V + N P Q + + ++ +I + + T E D M
Sbjct: 3014 CLVTVNIIDSNNNPPKFTKSQYFSSLPKSADYEQKILQVKAT-----------DEQDFGM 3062
Query: 260 EGRIVFALEKETEREKFKIRDENPWITVDE-NGDVRVKKRW 299
I +++ F I ++ W+TV N V+V R+
Sbjct: 3063 NAEIDYSISGGNGSNYFNINEKTGWLTVSRANIPVKVLSRY 3103
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 116/285 (40%), Gaps = 46/285 (16%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
LV Y I++GN F + G L V S +DREE YSL++TA D
Sbjct: 1050 LVSYEISEGNFEGKFGI-------------FPDGYLYVKSS-LDREERDYYSLIVTARDS 1095
Query: 87 KGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+++ T V + V+DENDN P F+ + F V + + S +G +SAT
Sbjct: 1096 GEPSRSSTVSVVIHVIDENDNPPEFTNSTFTFHV----------LENEPPDSFVGKLSAT 1145
Query: 146 DADGDKVA---YKLAVPSNLVVIVPQTG--ELLLTGDPPSDDVEYELTVEAHDLQSPSRY 200
D D + A + A P N +I P+ G + L+ D E + S
Sbjct: 1146 DRDIGRNAELIFSFANPQNEFIIDPKNGFVKTLIVF-----DREALIQTTGKGFISLEAV 1200
Query: 201 AREPAQVWLQFNSPV------LQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSE 254
+ Q+ L+ + V L D + + P++++ + R+ ++
Sbjct: 1201 VHDNGQIKLKDKAAVNVFIDDLNDNPPVFLT-----TPYKVQISEGSTLETQVLRVYATD 1255
Query: 255 TDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
D + G + +++ E +KF I IT+ ++ D R+
Sbjct: 1256 IDEGVNGEVYYSIAMGNEEQKFSIEQGTGQITLIKDLDRETTSRY 1300
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 34/209 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI GN+ F+++ T + L+ D+DRE ++Y L + A D
Sbjct: 1264 VYYSIAMGNEEQKFSIEQGTGQ-----------ITLIK--DLDRETTSRYVLTVIAEDGA 1310
Query: 88 GINK--AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
NK T V +D+LDENDN+P F Q ++ V + + +N+ ++ +K A
Sbjct: 1311 VQNKLSVSTTVVIDILDENDNAPEFVQTMFEISVPE-TTPVNTKLTQFK---------AI 1360
Query: 146 DAD---GDKVAYKLAVPS--NLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPSR 199
D D ++++ + + + I P +G L L +++ Y LT+ A D +P
Sbjct: 1361 DMDIGINSEISFSIGAGNRRDTFHIDPTSGTLYLHKLLDYEELNSYTLTIVASDGGNPRL 1420
Query: 200 YAREPAQVWLQ---FNSPVLQDEQLLQMI 225
+ V ++ NSPV + L++ I
Sbjct: 1421 SSTTLFNVTVEDSNDNSPVFPNTALVRQI 1449
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 114/280 (40%), Gaps = 44/280 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y I G++N A+ N T + T ++DRE + Y+LV+T TD+
Sbjct: 2006 IEYKIISGDENEDLAIANNGT--------------IYTVKELDRETKSAYNLVVTGTDLA 2051
Query: 88 GINK----AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
+ + VT+ + D ND SP F + K+S++ N+ +I ++
Sbjct: 2052 EPPQQRLSSTVQVTIVLKDVNDMSPEF--------ITPTKTSVSENIPLNTVVLAIKAID 2103
Query: 144 ATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPSRYAR 202
+ + Y L P+ + G L + G + V Y L V A D P RY +
Sbjct: 2104 KDEGRNSYLEYSLYDPTKTFSVGTIDGLLRVVGKLDRETVANYSLEVVAKDKGDPPRYTK 2163
Query: 203 EPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGR 262
+ +++ V+ + M D K + E + +V ++ ++ D + G+
Sbjct: 2164 Q--NIFVN----VVDENDNSPMFDPKHYSASIAENASIGASVL---QVSATDVDEGLNGK 2214
Query: 263 IVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ +++ E F I ++ G VRV K +FE
Sbjct: 2215 VRYSIFSGDENRDFSIS--------EDTGVVRVAKNLNFE 2246
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 18/117 (15%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN G+ + L I P+ +V Y I+ GN++ F L S +G
Sbjct: 3148 ENDPVGSTI--LTIKATDDDDGPNGMVEYKISSGNEDSKFHLN------------STTGA 3193
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYR 116
L + +D + V+ Y L +TATD+ G ++A VT+ + D NDN P F+Q VY+
Sbjct: 3194 LKILK-PLDYDTVSNYHLNVTATDL-GFEPHQATAMVTISLTDVNDNPPTFNQSVYK 3248
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 103/254 (40%), Gaps = 39/254 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
ES SG+L + +DRE Y L + A D GI + V + V D NDN PVFS Y
Sbjct: 1815 ESSSGILKLNDS-LDRETKDSYQLQVRAND--GIQYTDAIVKIFVTDTNDNPPVFSDNAY 1871
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV--PSNLVVIVPQTG 170
F V + + + + +G + ATD D +V+Y++ +++ + Q+G
Sbjct: 1872 SFDVPE----------NTIRGTRVGEIMATDEDEGINGQVSYQVISDWANDVFSLNSQSG 1921
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKS 229
LT ++V+ Y V+A D PS + + + FN L D L D S
Sbjct: 1922 VFTLTTRLDYEEVQHYIFVVQAQDSGKPSL----SSTLTVYFNVIDLNDNAPL--FDPMS 1975
Query: 230 EAPHRIEKRRVTRAVRPTKRIDF-SETDGEMEGRIVFALEKETEREKFKIRDENPWITVD 288
E + V D S +G +E +I+ DEN + +
Sbjct: 1976 YNNEVFENVTIGTNVVTVSATDLDSGQNGAIEYKIISG-------------DENEDLAIA 2022
Query: 289 ENGDVRVKKRWDFE 302
NG + K D E
Sbjct: 2023 NNGTIYTVKELDRE 2036
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 69/153 (45%), Gaps = 35/153 (22%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVL----LVTSGDIDREEVAQYSLVITATD 85
Y+I GN + F + N T + SG + L T+G++DRE A Y L I+A D
Sbjct: 184 YNIVGGNKDQKFRI---------NITSNPSGEMSYLNLETTGNLDRETRAFYHLNISAKD 234
Query: 86 -----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG 140
+ G V V +LD NDN P+F D SLN +V +S+
Sbjct: 235 GGDPPLYGY----LQVNVTILDVNDNPPMFDHS-------DYNVSLNESVPPG---TSVL 280
Query: 141 SVSATDAD-GD--KVAYKLAVPSNLVVIVPQTG 170
V ATD D GD K+ Y L + I P+TG
Sbjct: 281 QVRATDNDAGDNAKITYNLEDIGHQFSIDPETG 313
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 50/112 (44%), Gaps = 16/112 (14%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E S GT V G I + + + Y+ GNDN+ F L + SG
Sbjct: 499 ELSPPGTYVAG--ITASDEDTGVNAQIYYAFVSGNDNNWFELN------------ADSG- 543
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQ 112
L+ T IDRE L I+A D K A T + V VLDEND SP FSQ
Sbjct: 544 LITTKTTIDREIQGSVELKISARDGGPSPKWAYTQLKVTVLDENDESPKFSQ 595
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 3/59 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDL 122
+G +DREE+++Y+L I ATD KG + ++ +L D ND+ PVF + Y ++ +L
Sbjct: 443 NGVLDREEISKYNLTIVATD-KGTPPRSSSASLIILVNDVNDHEPVFEKSEYSVVLSEL 500
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 52 RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHV--TVDVLDENDNSPV 109
R E +GV+ T+ +DREE + Y L A D T V T+ +LD+NDNSP
Sbjct: 2442 RFHLEENTGVI-TTATILDREETSIYFLTYVAQDCSITEPKATAVNLTIIILDDNDNSPE 2500
Query: 110 FSQKVYRFIVGD 121
FS Y V D
Sbjct: 2501 FSSAEYSVSVPD 2512
Score = 37.4 bits (85), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 16/83 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
YSI GN F + +P T I T+ ++DRE++ Y+L+I A D G+
Sbjct: 3490 YSIINGNSEKAFKI-DPQTGAIE------------TAAELDREKIPAYTLIIGAIDT-GV 3535
Query: 90 NKAETHVTVDVL--DENDNSPVF 110
TV ++ D NDN P F
Sbjct: 3536 PPQTGTATVKIILEDVNDNEPFF 3558
>gi|444525565|gb|ELV14091.1| Protocadherin gamma-B5 [Tupaia chinensis]
Length = 508
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 64/126 (50%), Gaps = 20/126 (15%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH L Y ++ N F+L I+N TE K+ LV +DRE+ + LV+TA
Sbjct: 164 PHSLQSYQLS---SNEHFSLM------IKNKTEGKNAPELVLEKPLDREQQISHLLVLTA 214
Query: 84 TDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
TD + T + ++V D NDN+PVFSQ VYR SL NV +S+ V
Sbjct: 215 TDGGNPVLTGTTQIQIEVTDANDNAPVFSQDVYRV-------SLRENVPPG---TSVLKV 264
Query: 143 SATDAD 148
+ATD D
Sbjct: 265 TATDQD 270
>gi|162138882|ref|NP_001104606.1| protocadherin alpha 6 precursor [Gallus gallus]
gi|45790054|gb|AAS77410.1| cadherin-related neuronal receptor 6 [Gallus gallus]
Length = 989
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 128/274 (46%), Gaps = 55/274 (20%)
Query: 36 NDNHTFALKNPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA 92
N +++L +P+ H ++++ ++ + LV + +DRE ++++ LV+TA+D G A
Sbjct: 163 NAQLSYSL-SPSEHFALDVKSPDDNLKSLFLVLTHPLDRESLSEHRLVLTASD--GGRPA 219
Query: 93 ET---HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD- 148
T + + VLD NDN+P F+Q VY K L + + + + + V+ATD D
Sbjct: 220 LTGTVQLVISVLDANDNAPQFNQSVY-------KVQLPEDAA---EGTLVARVAATDPDV 269
Query: 149 --GDKVAYKL--AVP---SNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPSRY 200
+ +Y + +VP S+ I P+TGE+ LTG +DV ++EL +EA D +P
Sbjct: 270 GFNQEFSYSIVSSVPASQSDAFSIDPRTGEIRLTGPLDFEDVLQHELQIEARDKGTPPLS 329
Query: 201 AR------------EPAQVWL-QFNSPVLQDE------QLLQMIDRKSEAPHRIEKRRVT 241
+VW+ + PV +D LL + DR S P+ RV
Sbjct: 330 GHCSVILEVLDVNDNAPEVWVTSLSVPVPEDAALGTVVALLSVSDRDS-GPN----GRVR 384
Query: 242 RAVRPTKRIDFSETDGEMEGRIVFALEKETEREK 275
AVRP T G L + +RE+
Sbjct: 385 CAVRPPSPFGLVAT---FAGSYSLVLREALDRER 415
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 123/297 (41%), Gaps = 55/297 (18%)
Query: 25 HQLVRYSITQ---GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVI 81
+Q YSI + + F++ +P T EIR +G +D E+V Q+ L I
Sbjct: 272 NQEFSYSIVSSVPASQSDAFSI-DPRTGEIR------------LTGPLDFEDVLQHELQI 318
Query: 82 TATDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS- 138
A D KG H +V +VLD NDN+P +V+ +SL+ V +
Sbjct: 319 EARD-KGTPPLSGHCSVILEVLDVNDNAP----EVW-------VTSLSVPVPEDAALGTV 366
Query: 139 IGSVSATDADGD-----KVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAH 192
+ +S +D D + A + P LV + L+L + V EYE+ V A
Sbjct: 367 VALLSVSDRDSGPNGRVRCAVRPPSPFGLVATFAGSYSLVLREALDRERVSEYEVEVRAE 426
Query: 193 DLQSP----SRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTK 248
D +P SR R P + N+P ++A + + R A
Sbjct: 427 DGGAPPLRASRGLRVPVSD-VNDNAPAF------------AQAVYTVLARENNAAGAELA 473
Query: 249 RIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVD-ENGDVRVKKRWDFEEL 304
R+ + D GR+ +++ + R + +++VD E+G +R + D+EEL
Sbjct: 474 RLWARDPDEAGNGRVSYSVAEGGAGTGSGWRPASSYVSVDAESGRLRALRPLDYEEL 530
>gi|14009465|gb|AAK51618.1|AF217751_1 protocadherin-psi1 [Homo sapiens]
Length = 587
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+T G +DRE A+Y++ IT TD+ K E ++T+ V D NDN+P F+Q Y V +
Sbjct: 404 LLTEGALDRESRAEYNITITVTDLGTPRLKTEYNITLRVSDVNDNAPAFTQTSYTLFVRE 463
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H IGSVSATD D +V Y L P N LV I G
Sbjct: 464 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQNPHLPLASLVSINTDNGH 513
Query: 172 LLLTGDPPSDDV-EYELTVEAHDLQSPS 198
L + + E+E V A D SP+
Sbjct: 514 LFALRSLDYEALQEFEFRVGASDRGSPA 541
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 77/173 (44%), Gaps = 28/173 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
YSI+ + H F RN ++ K LV +DREE Q L +TA D
Sbjct: 171 YSISTNSYFHLFT---------RNHSDGKKYPELVLDQALDREEQPQLRLTLTALDGGSP 221
Query: 90 NKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ T V + ++D NDN P F+Q+ Y V + N+ + S + +VSA D D
Sbjct: 222 PRTGTSQVLIVIVDINDNVPEFAQRRYEVQVPE-----NTPIG-----SLVITVSARDLD 271
Query: 149 G---DKVAYKLAVPSNLVV----IVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
+++Y SN ++ I TGE+ ++++ Y + VEA D
Sbjct: 272 AGTHGELSYSFFQYSNQIIQAFEINSITGEIRFKKALDFEEIQSYHMEVEASD 324
>gi|301770611|ref|XP_002920723.1| PREDICTED: protocadherin Fat 1-like [Ailuropoda melanoleuca]
Length = 4587
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 25/206 (12%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G+ V + H V Y I GN F + NP + I +T +D
Sbjct: 1680 GIGSFVGTVTAHSQSSVVYEIKDGNIGDAFDI-NPHSGSI------------ITQKALDF 1726
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E V Y+L+I T++ G++ + T V V + DENDN PVF+Q Y ++ + +S+NS V
Sbjct: 1727 ETVPVYALIIQGTNMAGLS-SNTTVVVHLQDENDNLPVFTQAEYTGLISE-SASINSVVL 1784
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVE 184
K + + ATDAD + + Y + PS I TG + +L+ D +
Sbjct: 1785 TDKNVPLV--IRATDADRESNALLVYHIVEPSLHKYFAIDSSTGAIHTVLSLD-YEETRT 1841
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQ 210
+ TV+ HD+ +P +A A V ++
Sbjct: 1842 FHFTVQVHDMGTPRLFAEYAANVTIR 1867
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + +P +RY I G++ + F + + +R T+
Sbjct: 44 ENSAAKTYV-GHPVKMGIYLTNPLWELRYKIVSGDNENLFKAEEYILGDFCFLRIRTKGG 102
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A V V VLD ND P+FS Y
Sbjct: 103 NTAIL------NREVKDHYTLIVKAVEKNTNAEARAKVRVQVLDTNDLRPLFSPTSYSV- 155
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +S+ VSATDAD + Y +++ I P +G ++LT
Sbjct: 156 ------SLPENTAMR---TSVARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGAVVLT 206
Query: 176 G 176
G
Sbjct: 207 G 207
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 32/199 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + S + + YSI GN++ F++ +S++G + V +
Sbjct: 3245 GTEVLQVYAVSRDIEANAEITYSIMSGNEHGKFSI------------DSRTGAIFVIE-N 3291
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L I A D ++ T V+++V D NDNSPVFSQ Y +V + + L
Sbjct: 3292 LDYESSREYYLTIEAMDGGTPSLSDVAT-VSINVTDINDNSPVFSQDTYTAVVSE-DALL 3349
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
S+ +V A DADG + Y + + + P GE+ +T +
Sbjct: 3350 E---------QSVITVMADDADGPSNSHIRYSIIDGNQGSPFTVDPTRGEVKVTKLLDRE 3400
Query: 182 DVE-YELTVEAHDLQSPSR 199
+ Y LTV+A D SP R
Sbjct: 3401 TISGYTLTVQASDNGSPPR 3419
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F S K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1173 LMYKITSGNPQGFF------------SVHPKTGLITTTSRKLDREQQDEHILEVTVTD-N 1219
Query: 88 GINKAET--HVTVDVLDENDNSPVFSQKVYRF 117
GI T V V +LDENDN P F QK Y+
Sbjct: 1220 GIPPKSTIARVIVKILDENDNKPQFLQKFYKI 1251
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYSI GN F + +PT E++ + +DRE ++ Y+L + A+D
Sbjct: 3369 IRYSIIDGNQGSPFTV-DPTRGEVK------------VTKLLDRETISGYTLTVQASDNG 3415
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+PVFS+ Y I+
Sbjct: 3416 SPPRVNTTTVNIDVSDVNDNAPVFSKGNYSVII 3448
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 77/173 (44%), Gaps = 32/173 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N I+N + + +DRE+ Y L ITATD
Sbjct: 2953 VTYYITGGDPLGQFAIEN-----IQNEWK------VYVKKPLDREKRDNYLLTITATD-- 2999
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G ++ V V VLD NDNSPV + +Y V + S I VSATDA
Sbjct: 3000 GTFSSKAIVEVKVLDANDNSPVCEKTLYSDTVPEDAS----------PGQLILQVSATDA 3049
Query: 148 D---GDKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHD 193
D ++ Y L P + + P TGEL P D E Y L V+A D
Sbjct: 3050 DIRSNAEITYTLLGPGAEKFTLNPDTGELRTLA--PLDREEQGVYNLLVKATD 3100
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
I R++ + + L +T +D +A T V V VL N N P F+Q Y K+S +
Sbjct: 425 IKRQQASHFELEVTTSD----RRASTRVLVKVLSANSNPPEFTQSAY-------KASFDE 473
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT 188
NV S+ +V + + V Y +A +++ ++ + T S+D++YEL
Sbjct: 474 NVPIGTTVMSVSAVDPDEGENGYVTYSIANLNHVPFVINHFTGAVST----SEDLDYELM 529
Query: 189 VEAHDLQ 195
+ L+
Sbjct: 530 PRVYTLR 536
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 14/87 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GN++ F + + ++G+L + S +DRE +Y+L +T +D+
Sbjct: 753 YAISGGNEDSCFII------------DMETGMLKILS-PLDRETTDKYTLNVTVSDLGIP 799
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVY 115
KA + V VLD NDN P F Q+ Y
Sbjct: 800 QKAAWRLLDVRVLDANDNPPEFLQESY 826
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E+ Q+ + + A D G+ ++ VTVDV D NDN P+F Q +Y ++ +
Sbjct: 2347 LDYEQFQQHKIFVRAVD-GGMPPLSSDVIVTVDVTDLNDNPPLFDQHIY-------EARI 2398
Query: 127 NSNVSHWKKFSSIGSVSATDADGDKVAYKL 156
+ + H + + + A +D DK+ Y +
Sbjct: 2399 SEHAIHGHFVTCVKAYDADSSDVDKLDYSI 2428
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 69 IDREEVAQYSLVITATDVKGINK---AETHVTVDVLDENDNSPVFSQKVY 115
+DRE+ A YSL + A D +G+ + A V V VLD NDN PVF + Y
Sbjct: 3186 LDREQQAVYSLTLKAVD-QGLPRRLTATGTVVVSVLDINDNPPVFEYRDY 3234
>gi|195471220|ref|XP_002087903.1| GE14764 [Drosophila yakuba]
gi|194174004|gb|EDW87615.1| GE14764 [Drosophila yakuba]
Length = 5024
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 19/143 (13%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET 94
N N +++ + R E +SG + V +G +DRE+ +Y L + A+D G +AET
Sbjct: 2821 ANANASYSFSENPGEKFR--IEPQSGNITV-AGHLDREQQDEYILKVVASD--GAWRAET 2875
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GD 150
+T+ + D+NDN+P F Y F +L+ S+ + +G + ATD D
Sbjct: 2876 PITITIQDQNDNAPEFEHSFYSFSFPELQQSI----------ALVGQIIATDRDKQGPNS 2925
Query: 151 KVAYKLAVPSNLVVIVPQTGELL 173
++Y L PS + I P TGE+
Sbjct: 2926 VISYSLQQPSPMFSIDPATGEVF 2948
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 72/142 (50%), Gaps = 18/142 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
L+ + +DRE ++Y L I +D G+ ET+ T+ V D NDN P+F VY F + +
Sbjct: 1755 LILNDTLDRETKSKYELRIRVSD--GVQYTETYATIQVSDTNDNPPLFEDTVYSFDIPE- 1811
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV--PSNLVVIVPQTGELLLTGD 177
+ ++ +G + A DAD +V+Y + +++ + PQTG L LT
Sbjct: 1812 ---------NAQRGYQVGQIVARDADLGQNAQVSYGVVSDWANDVFSLNPQTGMLTLTAR 1862
Query: 178 PPSDDVE-YELTVEAHDLQSPS 198
++V+ Y L V+A D PS
Sbjct: 1863 LDYEEVQHYILIVQAQDNGQPS 1884
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 120/281 (42%), Gaps = 43/281 (15%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT V + + + S + VR I GN+ F L+ E+
Sbjct: 392 ENAVNGTVVAAVAVKDSDSGLNGRTSVR--IVSGNELGHFRLE-----------EAADLH 438
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVG 120
++ +G +DREE+ +Y+L + A D + T H+ +DV D ND+ PVF + Y ++
Sbjct: 439 IVRVNGVLDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLS 498
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL--VVIVPQTGELLLT 175
+L + S + S++ATD D +V Y + + L + P TG ++ T
Sbjct: 499 ELAPT----------GSFVASITATDEDTGVNAQVHYDILSGNELKWFSMDPLTGLIVTT 548
Query: 176 GDPPSDDVE--YELTVEAHDLQSPSRYAREPAQV-WLQFNSPVLQDEQLLQMIDRKSEAP 232
G P ++ EL++ A D ++A +V L N Q Q Q + +AP
Sbjct: 549 G-PLDREIRDTVELSISARDGGPNPKFAYTQLKVIILDENDEAPQFSQREQNVTLSEDAP 607
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETER 273
+ +T ++ D G + FAL ER
Sbjct: 608 PQTIVALMTA----------TDHDQGTNGSVTFALAPSVER 638
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 33/180 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYSI G+ NH F++ T GV+ V +++ E +++YSL + A D
Sbjct: 2191 IRYSIVLGDQNHDFSISEDT------------GVVRVAK-NLNYERLSRYSLTVRAEDCA 2237
Query: 88 GINKA--ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
N A +T+++LD NDN P F Y V +++++ N + + +V+A
Sbjct: 2238 LENPAGDTAELTINILDINDNRPTFLDSPYLARV--MENTVPPNGGY------VLTVNAY 2289
Query: 146 DAD----GDKVAYKLA-VPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
DAD +V Y L S+L I +G++ L P D EY LT+ A D SP
Sbjct: 2290 DADTPPLNSQVRYFLKEGDSDLFRINASSGDIALL--KPLDREQQSEYTLTLVAMDTGSP 2347
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 60/143 (41%), Gaps = 13/143 (9%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
+Y I GN ++ F L N + S + L T+G++DRE Y L I+A D
Sbjct: 193 QYEIVAGNVDNKFRLVTTA-----NPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGT 247
Query: 89 INK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ V V +LD NDN P+F D SLN +++ +
Sbjct: 248 PPRFGYLQVNVTILDVNDNPPIFDHS-------DYNVSLNETALPGTPVATVMASDNDLG 300
Query: 148 DGDKVAYKLAVPSNLVVIVPQTG 170
D K+ Y LA + + P+TG
Sbjct: 301 DNSKITYYLAETEHQFTVNPETG 323
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 13/82 (15%)
Query: 69 IDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+DRE + Y L ITA D +G ET + + +LDENDNSPVF K Y V +
Sbjct: 2114 LDRELRSSYLLNITARD-RGEPPQSTETQLLIRILDENDNSPVFDPKQYSASVAE----- 2167
Query: 127 NSNVSHWKKFSSIGSVSATDAD 148
N+++ + + VSATD D
Sbjct: 2168 NASIG-----AMVLQVSATDVD 2184
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 18/156 (11%)
Query: 68 DIDREEVAQYSLVITATDVKGINK----AETHVTVDVLDENDNSPVFSQKVYRFIVGDLK 123
+IDRE + + L + ATD ++ E VTV V D NDN+PVF +
Sbjct: 1433 EIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPSKFS 1492
Query: 124 SSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPP 179
+S S+ +++ V A DAD V Y++ + P L + TG + T P
Sbjct: 1493 TSKGSS-------TAVMQVHAKDADSSSNGLVTYEIVSGPQELFKLQRNTGVVTFTPAPQ 1545
Query: 180 -SDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSP 214
+V Y+LT++A D S R ++V++ +P
Sbjct: 1546 LKQEVRYQLTLKATDEAVQSE--RRSSEVYITIITP 1579
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 32/134 (23%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
YSI GN H+F + + T EI ST S+ +DREE++ Y+LVI A D G+
Sbjct: 3461 YSIINGNLKHSFKI-DVQTGEI--STASR----------LDREEISTYNLVIGAIDT-GL 3506
Query: 90 --NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS-HWKKFSSIGSVSATD 146
V +++ D NDN P F+ + +LN +S + +SI ++ A+D
Sbjct: 3507 PPQTGSATVHIELEDVNDNGPTFTTE-----------ALNGYISENEPPGTSIMTLMASD 3555
Query: 147 AD----GDKVAYKL 156
D G Y+L
Sbjct: 3556 PDLPRNGGPFTYQL 3569
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 16/94 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ ++RYSI+ GN+ F S + ++G +++ +D + + +Y L IT
Sbjct: 3138 PNGMLRYSISGGNERQDF------------SVDERTGGIVIQQ-QLDYDLIQEYHLNITV 3184
Query: 84 TDVKGINKAET--HVTVDVLDENDNSPVFSQKVY 115
D+ G + + +T+ + D NDN PVF Q+ Y
Sbjct: 3185 QDL-GYHPLSSVAMLTIILTDVNDNPPVFDQREY 3217
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 15/93 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y I +GN F + G L V + +DREE Y+L ++ D
Sbjct: 962 ISYEIIEGNSERMFGV-------------FPDGFLFVRA-PLDREERDYYALTVSCRDAG 1007
Query: 88 GINKAET-HVTVDVLDENDNSPVFSQKVYRFIV 119
+++ V + V+DENDN+P F+ + F +
Sbjct: 1008 QPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSI 1040
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTV--DVLDENDNSPVFS 111
S ++G+L +T+ +D EEV Y L++ A D G T +TV +VLD NDN+P+F
Sbjct: 1849 SLNPQTGMLTLTA-RLDYEEVQHYILIVQAQD-NGQPSLSTTITVYCNVLDLNDNAPIFD 1906
Query: 112 QKVY 115
Y
Sbjct: 1907 PMSY 1910
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 30/120 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
V Y++ +GN+ F L + T L + +DRE + L++ A D
Sbjct: 1191 VYYTLAKGNEAGQFNLDSATGQ-------------LSLARRLDRESQEIHHLIVVAKDAA 1237
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQ---------------KVYRFIVGDLKSSLNSNV 130
+K + +T+ VLDENDN+P F+Q ++ RF D +NS V
Sbjct: 1238 LKHPLSSNASITIVVLDENDNAPEFTQSSSEVSVLETSPTGTELMRFRASDADQGVNSQV 1297
>gi|281339742|gb|EFB15326.1| hypothetical protein PANDA_009494 [Ailuropoda melanoleuca]
Length = 4593
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 96/206 (46%), Gaps = 25/206 (12%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G+ V + H V Y I GN F + NP + I +T +D
Sbjct: 1686 GIGSFVGTVTAHSQSSVVYEIKDGNIGDAFDI-NPHSGSI------------ITQKALDF 1732
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E V Y+L+I T++ G++ + T V V + DENDN PVF+Q Y ++ + +S+NS V
Sbjct: 1733 ETVPVYALIIQGTNMAGLS-SNTTVVVHLQDENDNLPVFTQAEYTGLISE-SASINSVVL 1790
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVE 184
K + + ATDAD + + Y + PS I TG + +L+ D +
Sbjct: 1791 TDKNVPLV--IRATDADRESNALLVYHIVEPSLHKYFAIDSSTGAIHTVLSLD-YEETRT 1847
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQ 210
+ TV+ HD+ +P +A A V ++
Sbjct: 1848 FHFTVQVHDMGTPRLFAEYAANVTIR 1873
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + +P +RY I G++ + F + + +R T+
Sbjct: 44 ENSAAKTYV-GHPVKMGIYLTNPLWELRYKIVSGDNENLFKAEEYILGDFCFLRIRTKGG 102
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A V V VLD ND P+FS Y
Sbjct: 103 NTAIL------NREVKDHYTLIVKAVEKNTNAEARAKVRVQVLDTNDLRPLFSPTSYSV- 155
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +S+ VSATDAD + Y +++ I P +G ++LT
Sbjct: 156 ------SLPENTAMR---TSVARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGAVVLT 206
Query: 176 G 176
G
Sbjct: 207 G 207
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 32/199 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + S + + YSI GN++ F++ +S++G + V +
Sbjct: 3251 GTEVLQVYAVSRDIEANAEITYSIMSGNEHGKFSI------------DSRTGAIFVIE-N 3297
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L I A D ++ T V+++V D NDNSPVFSQ Y +V + + L
Sbjct: 3298 LDYESSREYYLTIEAMDGGTPSLSDVAT-VSINVTDINDNSPVFSQDTYTAVVSE-DALL 3355
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
S+ +V A DADG + Y + + + P GE+ +T +
Sbjct: 3356 E---------QSVITVMADDADGPSNSHIRYSIIDGNQGSPFTVDPTRGEVKVTKLLDRE 3406
Query: 182 DVE-YELTVEAHDLQSPSR 199
+ Y LTV+A D SP R
Sbjct: 3407 TISGYTLTVQASDNGSPPR 3425
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 15/92 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F S K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1173 LMYKITSGNPQGFF------------SVHPKTGLITTTSRKLDREQQDEHILEVTVTD-N 1219
Query: 88 GINKAET--HVTVDVLDENDNSPVFSQKVYRF 117
GI T V V +LDENDN P F QK Y+
Sbjct: 1220 GIPPKSTIARVIVKILDENDNKPQFLQKFYKI 1251
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYSI GN F + +PT E++ + +DRE ++ Y+L + A+D
Sbjct: 3375 IRYSIIDGNQGSPFTV-DPTRGEVK------------VTKLLDRETISGYTLTVQASDNG 3421
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+PVFS+ Y I+
Sbjct: 3422 SPPRVNTTTVNIDVSDVNDNAPVFSKGNYSVII 3454
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 77/173 (44%), Gaps = 32/173 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N I+N + + +DRE+ Y L ITATD
Sbjct: 2959 VTYYITGGDPLGQFAIEN-----IQNEWK------VYVKKPLDREKRDNYLLTITATD-- 3005
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G ++ V V VLD NDNSPV + +Y V + S I VSATDA
Sbjct: 3006 GTFSSKAIVEVKVLDANDNSPVCEKTLYSDTVPEDAS----------PGQLILQVSATDA 3055
Query: 148 D---GDKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHD 193
D ++ Y L P + + P TGEL P D E Y L V+A D
Sbjct: 3056 DIRSNAEITYTLLGPGAEKFTLNPDTGELRTLA--PLDREEQGVYNLLVKATD 3106
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
I R++ + + L +T +D +A T V V VL N N P F+Q Y K+S +
Sbjct: 425 IKRQQASHFELEVTTSD----RRASTRVLVKVLSANSNPPEFTQSAY-------KASFDE 473
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT 188
NV S+ +V + + V Y +A +++ ++ + T S+D++YEL
Sbjct: 474 NVPIGTTVMSVSAVDPDEGENGYVTYSIANLNHVPFVINHFTGAVST----SEDLDYELM 529
Query: 189 VEAHDLQ 195
+ L+
Sbjct: 530 PRVYTLR 536
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 14/87 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GN++ F + + ++G+L + S +DRE +Y+L +T +D+
Sbjct: 753 YAISGGNEDSCFII------------DMETGMLKILS-PLDRETTDKYTLNVTVSDLGIP 799
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVY 115
KA + V VLD NDN P F Q+ Y
Sbjct: 800 QKAAWRLLDVRVLDANDNPPEFLQESY 826
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 10/90 (11%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E+ Q+ + + A D G+ ++ VTVDV D NDN P+F Q +Y ++ +
Sbjct: 2353 LDYEQFQQHKIFVRAVD-GGMPPLSSDVIVTVDVTDLNDNPPLFDQHIY-------EARI 2404
Query: 127 NSNVSHWKKFSSIGSVSATDADGDKVAYKL 156
+ + H + + + A +D DK+ Y +
Sbjct: 2405 SEHAIHGHFVTCVKAYDADSSDVDKLDYSI 2434
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 4/50 (8%)
Query: 69 IDREEVAQYSLVITATDVKGINK---AETHVTVDVLDENDNSPVFSQKVY 115
+DRE+ A YSL + A D +G+ + A V V VLD NDN PVF + Y
Sbjct: 3192 LDREQQAVYSLTLKAVD-QGLPRRLTATGTVVVSVLDINDNPPVFEYRDY 3240
>gi|17352473|ref|NP_477497.1| fat [Drosophila melanogaster]
gi|13124727|sp|P33450.3|FAT_DROME RecName: Full=Cadherin-related tumor suppressor; AltName:
Full=Protein fat; Flags: Precursor
gi|7295732|gb|AAF51036.1| fat [Drosophila melanogaster]
Length = 5147
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 19/143 (13%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET 94
N N +++ + R E +SG + V +G +DRE+ +Y L + A+D G +AET
Sbjct: 2943 ANANASYSFSENPGEKFR--IEPQSGNITV-AGHLDREQQDEYILKVVASD--GAWRAET 2997
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GD 150
+T+ + D+NDN+P F Y F +L+ S+ + +G + ATD D
Sbjct: 2998 PITITIQDQNDNAPEFEHSFYSFSFPELQQSI----------ALVGQIIATDRDKQGPNS 3047
Query: 151 KVAYKLAVPSNLVVIVPQTGELL 173
++Y L PS + I P TGE+
Sbjct: 3048 VISYSLQQPSPMFSIDPATGEVF 3070
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 18/142 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
L+ + +DRE ++Y L I +D G+ E + T+ V D NDN P+F VY F + +
Sbjct: 1877 LILNDTLDRETKSKYELRIRVSD--GVQYTEAYATIQVSDTNDNPPLFEDTVYSFDIPE- 1933
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPS----NLVVIVPQTGELLLTGD 177
+ ++ +G + A DAD G V S ++ + PQTG L LT
Sbjct: 1934 ---------NAQRGYQVGQIVARDADLGQNAQLSYGVVSDWANDVFSLNPQTGMLTLTAR 1984
Query: 178 PPSDDVE-YELTVEAHDLQSPS 198
++V+ Y L V+A D PS
Sbjct: 1985 LDYEEVQHYILIVQAQDNGQPS 2006
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 120/281 (42%), Gaps = 43/281 (15%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT V + + + S + VR I GN+ F L+ E+
Sbjct: 398 ENAVNGTVVAAVAVKDSDSGLNGRTSVR--IVSGNELGHFRLE-----------EAADLH 444
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVG 120
++ +G +DREE+ +Y+L + A D + T H+ +DV D ND+ PVF + Y ++
Sbjct: 445 IVRVNGVLDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLS 504
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL--VVIVPQTGELLLT 175
+L + S + S++ATD D +V Y + + L + P TG ++ T
Sbjct: 505 ELAPT----------GSFVASITATDEDTGVNAQVHYDILSGNELKWFSMDPLTGLIVTT 554
Query: 176 GDPPSDDVE--YELTVEAHDLQSPSRYAREPAQV-WLQFNSPVLQDEQLLQMIDRKSEAP 232
G P ++ EL++ A D ++A +V L N Q Q Q + +AP
Sbjct: 555 G-PLDREIRDTVELSISARDGGPNPKFAYTQLKVIILDENDEAPQFSQREQNVTLGEDAP 613
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETER 273
+ +T ++ D G + FAL ER
Sbjct: 614 PQTIVALMTA----------TDHDQGTNGSVTFALAPSVER 644
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 33/180 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYSI G+ NH F++ T GV+ V + +++ E +++YSL + A D
Sbjct: 2313 IRYSIVLGDQNHDFSISEDT------------GVVRV-AKNLNYERLSRYSLTVRAEDCA 2359
Query: 88 GINKA--ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
N A +T+++LD NDN P F Y V +++++ N + + +V+A
Sbjct: 2360 LENPAGDTAELTINILDINDNRPTFLDSPYLARV--MENTVPPNGGY------VLTVNAY 2411
Query: 146 DAD----GDKVAYKLA-VPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
DAD +V Y L S+L I +G++ L P D EY LT+ A D SP
Sbjct: 2412 DADTPPLNSQVRYFLKEGDSDLFRINASSGDIALL--KPLDREQQSEYTLTLVAMDTGSP 2469
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 59/143 (41%), Gaps = 13/143 (9%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
+Y I GN ++ F L N + S + L T+G++DRE Y L I+A D
Sbjct: 193 QYEIVAGNVDNKFRLVTTA-----NPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGS 247
Query: 89 INK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ V V +LD NDN P+F D SLN ++ +
Sbjct: 248 PPRFGYLQVNVTILDVNDNPPIFDHS-------DYNVSLNETALPGTPVVTVMASDNDLG 300
Query: 148 DGDKVAYKLAVPSNLVVIVPQTG 170
D K+ Y LA + + P+TG
Sbjct: 301 DNSKITYYLAETEHQFTVNPETG 323
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 13/82 (15%)
Query: 69 IDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+DRE + Y L ITA D +G E+ + + +LDENDNSPVF K Y V +
Sbjct: 2236 LDRELRSSYLLNITARD-RGEPPQSTESQLLIRILDENDNSPVFDPKQYSASVAE----- 2289
Query: 127 NSNVSHWKKFSSIGSVSATDAD 148
N+++ + + VSATD D
Sbjct: 2290 NASIG-----AMVLQVSATDVD 2306
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 18/156 (11%)
Query: 68 DIDREEVAQYSLVITATDVKGINK----AETHVTVDVLDENDNSPVFSQKVYRFIVGDLK 123
+IDRE + + L + ATD ++ E VTV V D NDN+PVF +
Sbjct: 1555 EIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFS 1614
Query: 124 SSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPP 179
+S S+ +++ V A DAD V Y++ + P L + TG + T P
Sbjct: 1615 TSKGSS-------TAVMQVHAKDADSSSNGLVTYEIVSGPQELFKLQRNTGIITFTPGPQ 1667
Query: 180 -SDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSP 214
+V Y+LT+++ D S R ++V++ +P
Sbjct: 1668 FKQEVRYQLTLKSTDEAVQSE--RRSSEVYITIITP 1701
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 16/98 (16%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ ++RYSI+ GN+ F S + ++G +++ +D + + +Y L IT
Sbjct: 3260 PNGMLRYSISGGNERQDF------------SVDERTGGIVIQQ-QLDYDLIQEYHLNITV 3306
Query: 84 TDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIV 119
D+ G + + +T+ + D NDN PVF+ K Y +
Sbjct: 3307 QDL-GYHPLSSVAMLTIILTDVNDNPPVFNHKEYHCYI 3343
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 51 IRNSTESKSGVL----LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDEND 105
I +TE GV L +DREE Y+L ++ D +++ V + V+DEND
Sbjct: 1089 IEGNTERMFGVFPDGYLFVRAPLDREERDYYALTVSCRDAGQPSRSSVVPVVIHVIDEND 1148
Query: 106 NSPVFSQKVYRFIV 119
N+P F+ + F +
Sbjct: 1149 NAPQFTNSTFTFSI 1162
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTV--DVLDENDNSPVFS 111
S ++G+L +T+ +D EEV Y L++ A D G T +TV +VLD NDN+P+F
Sbjct: 1971 SLNPQTGMLTLTA-RLDYEEVQHYILIVQAQD-NGQPSLSTTITVYCNVLDLNDNAPIFD 2028
Query: 112 QKVY 115
Y
Sbjct: 2029 PMSY 2032
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 98/240 (40%), Gaps = 25/240 (10%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTV--DVLDENDNSPVFSQK--VYRFI 118
L T +DRE+++QY + + A D TV +V D NDN P F + +Y
Sbjct: 659 LTTRRPLDREKMSQYEISVIARDQGAPTPQSATATVWLNVADVNDNDPQFYPRHYIYSLA 718
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKL-AVPSNLVVIVPQTGELLLTGD 177
D L V + + + D D + Y+L + L + ++G + L GD
Sbjct: 719 DDDDDIKLKKEVEKERILLHVTASDKDDGDNALIEYRLESGGEGLFQLDARSGAISLRGD 778
Query: 178 PPSD---DVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPV--LQDEQL------LQMID 226
P+ Y+L V A D + R +++ A V + S + L+ Q QM++
Sbjct: 779 APASMHWKPHYKLLVSARD--AGQRRSQQDAIVEIVLKSKLEMLECGQAQAGGYEFQMVE 836
Query: 227 RKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWIT 286
E++R ++ R + T+G+ I + + + + F+I + IT
Sbjct: 837 DH-------EQQRNSQPNREVGIVQVKSTNGKANSHIEYDIIQGDRAQNFRIDTRSGRIT 889
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 30/120 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
V YS+ +GN+ F L + T L +DRE + L++ A D
Sbjct: 1313 VYYSLAKGNEAGQFNLDSATGQ-------------LSLGRRLDRESQEIHHLIVVAKDAA 1359
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQ---------------KVYRFIVGDLKSSLNSNV 130
+K + +T+ VLDENDN+P F+Q ++ RF D +NS V
Sbjct: 1360 LKHPLSSNASITIVVLDENDNAPEFTQSSSEVSVLETSPTGTELMRFRASDADQGVNSQV 1419
>gi|157409|gb|AAA28530.1| fat protein [Drosophila melanogaster]
Length = 5147
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 19/143 (13%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET 94
N N +++ + R E +SG + V +G +DRE+ +Y L + A+D G +AET
Sbjct: 2943 ANANASYSFSENPGEKFR--IEPQSGNITV-AGHLDREQQDEYILKVVASD--GAWRAET 2997
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GD 150
+T+ + D+NDN+P F Y F +L+ S+ + +G + ATD D
Sbjct: 2998 PITITIQDQNDNAPEFEHSFYSFSFPELQQSI----------ALVGQIIATDRDKQGPNS 3047
Query: 151 KVAYKLAVPSNLVVIVPQTGELL 173
++Y L PS + I P TGE+
Sbjct: 3048 VISYSLQQPSPMFSIDPATGEVF 3070
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 18/142 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
L+ + +DRE ++Y L I +D G+ E + T+ V D NDN P+F VY F + +
Sbjct: 1877 LILNDTLDRETKSKYELRIRVSD--GVQYTEAYATIQVSDTNDNPPLFEDTVYSFDIPE- 1933
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPS----NLVVIVPQTGELLLTGD 177
+ ++ +G + A DAD G V S ++ + PQTG L LT
Sbjct: 1934 ---------NAQRGYQVGQIVARDADLGQNAQLSYGVVSDWANDVFSLNPQTGMLTLTAR 1984
Query: 178 PPSDDVE-YELTVEAHDLQSPS 198
++V+ Y L V+A D PS
Sbjct: 1985 LDYEEVQHYILIVQAQDNGQPS 2006
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 120/281 (42%), Gaps = 43/281 (15%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT V + + + S + VR I GN+ F L+ E+
Sbjct: 398 ENAVNGTVVAAVAVKDSDSGLNGRTSVR--IVSGNELGHFRLE-----------EAADLH 444
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVG 120
++ +G +DREE+ +Y+L + A D + T H+ +DV D ND+ PVF + Y ++
Sbjct: 445 IVRVNGVLDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLS 504
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL--VVIVPQTGELLLT 175
+L + S + S++ATD D +V Y + + L + P TG ++ T
Sbjct: 505 ELAPT----------GSFVASITATDEDTGVNAQVHYDILSGNELKWFSMDPLTGLIVTT 554
Query: 176 GDPPSDDVE--YELTVEAHDLQSPSRYAREPAQV-WLQFNSPVLQDEQLLQMIDRKSEAP 232
G P ++ EL++ A D ++A +V L N Q Q Q + +AP
Sbjct: 555 G-PLDREIRDTVELSISARDGGPNPKFAYTQLKVIILDENDEAPQFSQREQNVTLGEDAP 613
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETER 273
+ +T ++ D G + FAL ER
Sbjct: 614 PQTIVALMTA----------TDHDQGTNGSVTFALAPSVER 644
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 33/180 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYSI G+ NH F++ T GV+ V + +++ E +++YSL + A D
Sbjct: 2313 IRYSIVLGDQNHDFSISEDT------------GVVRV-AKNLNYERLSRYSLTVRAEDCA 2359
Query: 88 GINKA--ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
N A +T+++LD NDN P F Y V +++++ N + + +V+A
Sbjct: 2360 LENPAGDTAELTINILDINDNRPTFLDSPYLARV--MENTVPPNGGY------VLTVNAY 2411
Query: 146 DAD----GDKVAYKLA-VPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
DAD +V Y L S+L I +G++ L P D EY LT+ A D SP
Sbjct: 2412 DADTPPLNSQVRYFLKEGDSDLFRINASSGDIALL--KPLDREQQSEYTLTLVAMDTGSP 2469
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 59/143 (41%), Gaps = 13/143 (9%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
+Y I GN ++ F L N + S + L T+G++DRE Y L I+A D
Sbjct: 193 QYEIVAGNVDNKFRLVTTA-----NPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGS 247
Query: 89 INK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ V V +LD NDN P+F D SLN ++ +
Sbjct: 248 PPRFGYLQVNVTILDVNDNPPIFDHS-------DYNVSLNETALPGTPVVTVMASDNDLG 300
Query: 148 DGDKVAYKLAVPSNLVVIVPQTG 170
D K+ Y LA + + P+TG
Sbjct: 301 DNSKITYYLAETEHQFTVNPETG 323
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 13/82 (15%)
Query: 69 IDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+DRE + Y L ITA D +G E+ + V +LDENDNSPVF K Y V +
Sbjct: 2236 LDRELRSSYLLNITARD-RGEPPQSTESQLLVRILDENDNSPVFDPKQYSASVAE----- 2289
Query: 127 NSNVSHWKKFSSIGSVSATDAD 148
N+++ + + VSATD D
Sbjct: 2290 NASIG-----AMVLQVSATDVD 2306
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 18/156 (11%)
Query: 68 DIDREEVAQYSLVITATDVKGINK----AETHVTVDVLDENDNSPVFSQKVYRFIVGDLK 123
+IDRE + + L + ATD ++ E VTV V D NDN+PVF +
Sbjct: 1555 EIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFS 1614
Query: 124 SSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPP 179
+S S+ +++ V A DAD V Y++ + P L + TG + T P
Sbjct: 1615 TSKGSS-------TAVMQVHAKDADSSSNGLVTYEIVSGPQELFKLQRNTGIITFTPGPQ 1667
Query: 180 -SDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSP 214
+V Y+LT+++ D S R ++V++ +P
Sbjct: 1668 FKQEVRYQLTLKSTDEAVQSE--RRSSEVYITIITP 1701
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 16/98 (16%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ ++RYSI+ GN+ F S + ++G +++ +D + + +Y L IT
Sbjct: 3260 PNGMLRYSISGGNERQDF------------SVDERTGGIVIQQ-QLDYDLIQEYHLNITV 3306
Query: 84 TDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIV 119
D+ G + + +T+ + D NDN PVF+ K Y +
Sbjct: 3307 QDL-GYHPLSSVAMLTIILTDVNDNPPVFNHKEYHCYI 3343
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 51 IRNSTESKSGVL----LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDEND 105
I +TE GV L +DREE Y+L ++ D +++ V + V+DEND
Sbjct: 1089 IEGNTERMFGVFPDGYLFVRAPLDREERDYYALTVSCRDAGQPSRSSVVPVVIHVIDEND 1148
Query: 106 NSPVFSQKVYRFIV 119
N+P F+ + F +
Sbjct: 1149 NAPQFTNSTFTFSI 1162
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTV--DVLDENDNSPVFS 111
S ++G+L +T+ +D EEV Y L++ A D G T +TV +VLD NDN+P+F
Sbjct: 1971 SLNPQTGMLTLTA-RLDYEEVQHYILIVQAQD-NGQPSLSTTITVYCNVLDLNDNAPIFD 2028
Query: 112 QKVY 115
Y
Sbjct: 2029 PMSY 2032
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 15/87 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YS+ +GN+ F L + T L + +DRE + L++ A D
Sbjct: 1313 VYYSLAKGNEAGQFNLDSATGQ-------------LSLARRLDRESQEIHHLIVVAKDAA 1359
Query: 88 GINKAETH--VTVDVLDENDNSPVFSQ 112
+ T+ +T+ VLDENDN+P F+Q
Sbjct: 1360 LKHPLSTNASITIVVLDENDNAPEFTQ 1386
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 58/139 (41%), Gaps = 8/139 (5%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTV--DVLDENDNSPVFSQK--VYRFI 118
L T +DRE+++QY + + A D TV +V D NDN P F + +Y
Sbjct: 659 LTTRRPLDREKMSQYEIPVIARDQGAPTPQSATATVWLNVADVNDNDPQFYPRHYIYSLT 718
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKL-AVPSNLVVIVPQTGELLLTGD 177
D L V + + + D D + Y+L + L + ++G + L GD
Sbjct: 719 DDDDDIKLKKEVEKERILLHVTASDKDDGDNALIEYRLESGGEGLFQLDARSGAISLRGD 778
Query: 178 PPSD---DVEYELTVEAHD 193
P+ Y+L V A D
Sbjct: 779 APASMHWKPHYKLLVSARD 797
>gi|170032323|ref|XP_001844031.1| cadherin EGF LAG seven-pass G-type receptor 1 [Culex
quinquefasciatus]
gi|167872317|gb|EDS35700.1| cadherin EGF LAG seven-pass G-type receptor 1 [Culex
quinquefasciatus]
Length = 2812
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 100/240 (41%), Gaps = 38/240 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+ +G +DRE+ +Y L + A D G +AET +T+ + D+NDN+P F Y F +L
Sbjct: 623 VTVAGHLDREQQDEYILKVAAVD--GAWRAETPLTITIQDQNDNAPEFEHSYYSFNFPEL 680
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELLL---- 174
+ K+ + +G V ATD D ++Y L PS++ I P TGE+
Sbjct: 681 Q----------KQVTFVGQVIATDRDKHGPNSVISYSLQQPSDMFSIDPATGEIFSKRTI 730
Query: 175 ----TGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQMIDR 227
T S + + LTV A D P Y + + N PV + L
Sbjct: 731 HYKHTQMESSPENMFSLTVLATDNGKPPMYTECLININVVDANNNPPVFTQREYL----- 785
Query: 228 KSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
+ AP E V + + T+ + E D + I + + F + + WI V
Sbjct: 786 -APAP---EGANVGQKI--TQLVARDELDFGVNAEIEYVIAGGNGTNHFVVSKNDGWIVV 839
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ +VRYSI GN+ FA+ +S +G + + +D + + Y L ITA
Sbjct: 916 PNGMVRYSILGGNERKEFAV------------DSVTGAITILQ-PLDYDMIQTYQLNITA 962
Query: 84 TDVK-GINKAETHVTVDVLDENDNSPVFSQKVY 115
D+ K+ +TV + D NDN+P F+Q Y
Sbjct: 963 EDLGFKPKKSMAMITVTLTDINDNAPTFNQTEY 995
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 80/188 (42%), Gaps = 27/188 (14%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
I S K P +RY+I GN + +P T E+ V G +D E
Sbjct: 381 ISATSPKKGPAGNIRYAIAGGNIGDALRI-DPNTGEV-----------AVNKGGLDYESN 428
Query: 75 AQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHW 133
QY + I A D + ++ + ++V D NDN+PV ++VY V + +S
Sbjct: 429 QQYEVWIEAADSDRPSLRSVMQLIINVTDANDNAPVMEKQVYMAEVMEEESP-------- 480
Query: 134 KKFSSIGSVSATDADGD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDV-EYELTV 189
F + + ATD D + ++ Y L + I TGE+ T +D+ +Y L V
Sbjct: 481 GLF--VTKIQATDVDSEENGQITYSLKDDFDSFEINSDTGEIYTTTRLDREDIPKYALIV 538
Query: 190 EAHDLQSP 197
EA D P
Sbjct: 539 EAVDQGVP 546
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 28/154 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
++ YSI G F++ ES +G++ + D EE +Y+L + A +
Sbjct: 1024 IIHYSIIGGTGRDLFSI------------ESTTGIIK-SKATFDYEEQNKYTLDVVAMNP 1070
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
K +T V V V N+ P F Q V+ F V + + SS+GS+ ATD
Sbjct: 1071 DSPMKNKTKVIVHVTGVNEFYPKFIQPVFHFDVSE----------SAEVGSSVGSIQATD 1120
Query: 147 ADG---DKVAYKLAVPSN--LVVIVPQTGELLLT 175
D KV Y L SN I P++G ++++
Sbjct: 1121 KDAGEDGKVYYLLVGSSNDKGFSIHPESGVMVVS 1154
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQ 112
+ T+ +DRE++ +Y+L++ A D +G+ + V V+VLD+NDN P F++
Sbjct: 520 IYTTTRLDREDIPKYALIVEAVD-QGVPQLTGSATVLVNVLDKNDNPPKFTR 570
>gi|410948475|ref|XP_003980964.1| PREDICTED: protocadherin beta-6 [Felis catus]
Length = 701
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 73/148 (49%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ K + ++TV V D NDN+P FSQ Y V +
Sbjct: 401 LVTEGALDRESQAEYNITITVTDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRE 460
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H IGSVSATD D +V Y L P++ LV I G+
Sbjct: 461 ----NNSPALH------IGSVSATDRDSGANAQVTYSLLPPADPQLPLASLVSINADNGQ 510
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 511 LFALRSLDYEALQAFEFGVRAADRGSPA 538
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 15/117 (12%)
Query: 45 NPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLD 102
NP H + RN ++ + LV +DREE + L +TA D ++ T + + VLD
Sbjct: 174 NPHFHVLTRNRSDGRKFPELVLDKALDREEQPELRLTLTALDGGSPPRSGTTEIQILVLD 233
Query: 103 ENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
NDN+P F+Q+ Y + + +SL S I +VSA D D +VAY L
Sbjct: 234 INDNAPEFAQEQYEAQIPE-NNSLG---------SLIITVSARDLDAGSFGEVAYAL 280
>gi|395504742|ref|XP_003756706.1| PREDICTED: protocadherin beta-2-like [Sarcophilus harrisii]
Length = 790
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 22/115 (19%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+LVT G +DRE A+Y++ IT D+ K+E ++TV + D NDNSPVF+Q+ Y +
Sbjct: 402 MLVTEGALDREYKAEYNITITVMDLGFPKLKSEYNLTVFISDVNDNSPVFTQRAYTLYLQ 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVIVPQTGEL 172
+ NS H IGSVSA+D D K+ Y L + P+TGEL
Sbjct: 462 E----NNSPALH------IGSVSASDRDSGINAKITYSL--------LPPETGEL 498
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 13/114 (11%)
Query: 38 NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI--NKAETH 95
N+T + + +IR+++E K LV +DRE+ ++ L +TA D G+
Sbjct: 169 NYTISPNSLFHIQIRDNSEGKRYPELVLDETLDREKQSEVILTLTAVD-GGVPPRSGTAQ 227
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
V + ++D NDN+PVF+Q Y + + NS + S + +VSATD D
Sbjct: 228 VRILIVDINDNAPVFAQLRYEVQIPE-----NSPIG-----SKVVTVSATDLDA 271
>gi|307210681|gb|EFN87104.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Harpegnathos saltator]
Length = 3435
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 36/246 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+VT +DRE++ +Y + + ATD G V V V DENDN+PVF + Y
Sbjct: 1289 IVTRKKLDREQLKRYEIPVIATDGGG-RSGFVMVRVKVGDENDNAPVFLLREY------- 1340
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKL----AVPSNLVV-IVPQTGELLLTGD 177
K+++ SN+S F + + A + + K+ Y + P+ L+ I P TG L L
Sbjct: 1341 KATIQSNLSLNTPFLKVRAQDADEDEAAKIVYSIYETQTAPARLLFGINPDTGALFLQKS 1400
Query: 178 P-PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIE 236
P ++ +EL + A D + + +A P ++ ++ + + +RK + E
Sbjct: 1401 ALPWENQLFELFIRAEDKGTTTHHADVPLSIY------IMGPHDIPPLFERKEDKFFISE 1454
Query: 237 KRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
+ + K + T+ + RI+ E +NP T+D +G + +
Sbjct: 1455 ASSIGTPITKLKTV----TNSTVTYRIISGDE------------DNPLFTIDSHGQITLA 1498
Query: 297 KRWDFE 302
+ D E
Sbjct: 1499 RPLDRE 1504
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 85/190 (44%), Gaps = 37/190 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-VKG 88
YSIT+GND FAL + +GV+ V ++D E+ QY L + ATD V G
Sbjct: 957 YSITKGNDFEEFAL------------DFNTGVIYVVD-ELDYEQKKQYELTVRATDSVSG 1003
Query: 89 INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKF-SSIGSVSATDA 147
+ AE V++ VLD ND P F+Q Y N +VS F +S+ VS+ D
Sbjct: 1004 V-YAEVLVSILVLDVNDCPPEFTQDSY-----------NISVSEAASFGTSVLRVSSRDN 1051
Query: 148 D---GDKVAYKLA----VPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSR 199
D KV Y + ++L I P G + L + E + TV A D PS
Sbjct: 1052 DTGINQKVRYAIQNDTENSTDLFHIDPDEGVIFLKRSLDHETRESHHFTVIAMDRGVPS- 1110
Query: 200 YAREPAQVWL 209
A VW+
Sbjct: 1111 -LSSTAHVWV 1119
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 77/166 (46%), Gaps = 21/166 (12%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT----DVKGINK 91
N++ F++ NPT + T SG + T DRE Y L++ A D +
Sbjct: 746 NEHIVFSILNPTDMFVIGPT---SGAIRTTGIRFDRETCDHYELIVEAKSHPPDREKPRV 802
Query: 92 AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GD 150
A V V +LD NDN P+F Y +V S+++ +K I V A D D GD
Sbjct: 803 AHVIVNVTILDINDNCPMFVNLPYYAVV-----SVDA-----QKGDVITKVHAVDMDSGD 852
Query: 151 --KVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHD 193
+V Y+L L + +TGE+ L + + EY+LT+ A+D
Sbjct: 853 NGEVRYELKKGHGELFKVCRKTGEISLKQNLEGHNREYQLTIAAYD 898
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 21/114 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN + GT VK + SS +++ I +GN + TF + NP+T GV
Sbjct: 415 ENQQLGTYVKHVEARSTSS-------LQFEIVRGNRDDTFFV-NPST-----------GV 455
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
+++ + +D E+ Y+L ++AT++ G + A +V V VLD NDN+P F Q +Y
Sbjct: 456 IVIKN-QLDYEKTKFYNLSVSATNMAGAS-AVCNVIVHVLDRNDNAPRFLQALY 507
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 55/123 (44%), Gaps = 31/123 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN++ F + ++K+GV+ + +D E Y L I A D
Sbjct: 1994 IYYSIVGGNEHKKFQI------------DAKTGVVTIAEL-LDYERARDYFLTIQAVD-G 2039
Query: 88 GINKAETHVTVD--VLDENDNSPVFSQKVYRFIV---------------GDLKSSLNSNV 130
GI H TV+ V D NDN+P+FS+ YR V DL S N NV
Sbjct: 2040 GIPPLSNHATVNITVTDSNDNAPIFSEVSYRAAVREDAKIGEKVAQVYANDLDSEENGNV 2099
Query: 131 SHW 133
S++
Sbjct: 2100 SYY 2102
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDV--LDENDNSPVFS 111
S + K+G + V + +DREE+A Y L + A D GI + V V++ +D NDN P+FS
Sbjct: 2113 SIDRKTGQITV-AAPLDREEIANYVLEVHARD-SGIPMLSSFVMVNIEIMDANDNPPLFS 2170
Query: 112 QKVYRFIVGDLKS 124
Y +V + KS
Sbjct: 2171 LPNYTAVVQEDKS 2183
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 16/94 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ + IT G+ F +IR++ E + + +DRE + +Y L I TD K
Sbjct: 1685 IEFYITSGDPRSQF--------QIRSTGE------VYVAKSLDRETIDRYELEIVGTDGK 1730
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+ ET VTV VLD NDN P + YR ++ +
Sbjct: 1731 YV--FETRVTVQVLDVNDNPPYCLRYRYREVLSE 1762
>gi|157123758|ref|XP_001653880.1| cadherin [Aedes aegypti]
gi|108874300|gb|EAT38525.1| AAEL009616-PA [Aedes aegypti]
Length = 1831
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 98/206 (47%), Gaps = 41/206 (19%)
Query: 15 ILVASSHKHPHQLVRYSITQ------------GNDNHTFALKNPTTHEIRNSTESKSGVL 62
+ V S +HPHQ++ T G ++ ++L +H + ++K+G +
Sbjct: 1082 VTVMESDRHPHQVITVKATDADAVLSEKDKLLGYNSVWYSLAG--SHANLFTIDNKTGSI 1139
Query: 63 LVTSG-DIDREEVAQYSLVITATDVKG----INKAETHVTVDVLDENDNSPVFSQKVYRF 117
+ G +DRE+ + L+ITA D G + T V +DVLD NDN+P+F QK Y
Sbjct: 1140 SIAKGQSLDREKQSVLKLMITAEDSPGKATDAKRGYTEVIIDVLDVNDNAPMFGQKSYTA 1199
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL---AVPSNLVVIVPQTGE 171
++ + + + + +++A D D G +V Y+ + L+ I P+TGE
Sbjct: 1200 VIPE----------NVLADTFVIAITANDPDEGPGGEVRYEFLNEGEANGLLHINPKTGE 1249
Query: 172 L----LLTGDPPSDDVEYELTVEAHD 193
+ LLTG SD YE+ V A D
Sbjct: 1250 IKTKVLLTGKGRSD--PYEMVVRAQD 1273
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 24/155 (15%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKV 114
T+ ++G + V ++D EE YSL + ATD G + ++ +D++D NDN P F
Sbjct: 557 TDPQNGGVFVNL-NLDYEEQKSYSLALVATD-GGKRETNANLLIDIMDVNDNHPTFESLE 614
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-----GDKVAYKL----AVPSNLVVI 165
Y ++ V +F V ATD D G K+ Y + ++ ++ +
Sbjct: 615 YT------RTIREGAVEFEPQF----FVHATDLDGPQQGGGKITYSIESENSISGHVFTV 664
Query: 166 VPQTGELLLTGDPPSDDVE---YELTVEAHDLQSP 197
P +GE+ +T S D E YEL V A D P
Sbjct: 665 DPNSGEIKITRPVNSMDTERGQYELIVVATDHGVP 699
>gi|410925620|ref|XP_003976278.1| PREDICTED: protocadherin gamma-A11-like [Takifugu rubripes]
Length = 770
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 100/204 (49%), Gaps = 36/204 (17%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
RY I Q NDN ++ N V LV +DRE+ + +L++TA D
Sbjct: 168 RY-ILQKNDNFILSVDNKK-------------VELVLENRLDREKQKEMNLLLTALDGGS 213
Query: 89 INKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
++ T V V VLD NDN+PVFSQ VY K+SL N + + VSATDA
Sbjct: 214 PQRSGTVVIHVTVLDANDNAPVFSQAVY-------KASLPEN---SPLDTVVMQVSATDA 263
Query: 148 D----GDKVAYKLAVPS----NLVVIVPQTGELLLTGDPPSDD-VEYELTVEAHDLQSPS 198
D GD V Y S N+ + PQ+GE+ +TG ++ +E+ VEA D +
Sbjct: 264 DEGVNGD-VKYDFGHLSDEDVNVFSVDPQSGEIRVTGLIDYEERRSFEMRVEAKDGLGLT 322
Query: 199 RYAREPAQVWLQF-NSPVLQDEQL 221
YA+ +V + N+PV+Q + L
Sbjct: 323 SYAKLLIEVIDKNDNAPVIQLKSL 346
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 59/105 (56%), Gaps = 10/105 (9%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIV- 119
LVT+G +DRE V+ Y++ I+ATD ++ ++T + + V D NDN PVF ++ Y V
Sbjct: 398 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKT-LHLSVADINDNPPVFEEESYSAYVR 456
Query: 120 -----GDLKSSLNSNVSHWKKFSS-IGSVSATDADGDKVAYKLAV 158
G S+++ W++ + I S+ A + +G V+ ++V
Sbjct: 457 ENNRAGSTLCSVSAGDPDWRQNGTVIYSLLAAEVNGAPVSSYVSV 501
>gi|410913743|ref|XP_003970348.1| PREDICTED: protocadherin gamma-A2-like [Takifugu rubripes]
Length = 806
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 99/204 (48%), Gaps = 36/204 (17%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
RY I Q NDN + N V LV +DRE+ + +L++TA D
Sbjct: 168 RY-ILQKNDNFILSADN-------------KKVELVLENRLDREKQKEMNLLLTALDGGS 213
Query: 89 INKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
++ T V V VLD NDN+PVFSQ VY K+SL N + + VSATDA
Sbjct: 214 PQRSGTVVIHVTVLDANDNAPVFSQAVY-------KASLPEN---SPLDTVVMQVSATDA 263
Query: 148 D----GDKVAYKLAVPS----NLVVIVPQTGELLLTGDPPSDD-VEYELTVEAHDLQSPS 198
D GD V Y S N+ + PQ+GE+ +TG ++ +E+ VEA D +
Sbjct: 264 DEGVNGD-VKYDFGHLSDEDVNVFSVDPQSGEIRVTGLIDYEERRSFEMRVEAKDGLGLT 322
Query: 199 RYAREPAQVW-LQFNSPVLQDEQL 221
YA+ +V + N+PV+Q + L
Sbjct: 323 SYAKIVIEVIDVNDNAPVIQLKSL 346
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G +DRE V+ Y++ I+ATD + T + + V D NDN PVF ++ Y V +
Sbjct: 398 LVTTGQLDRELVSDYNITISATDEGSPPLSSTKTLHLSVADINDNPPVFEEESYSAYVSE 457
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + S++ SVSA D D
Sbjct: 458 ----------NNRAGSTLCSVSAGDPD 474
>gi|194758587|ref|XP_001961543.1| GF15021 [Drosophila ananassae]
gi|190615240|gb|EDV30764.1| GF15021 [Drosophila ananassae]
Length = 5182
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 106/246 (43%), Gaps = 36/246 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
LV +DRE ++Y L I +D GI ET+ T++V D NDN PVF + VY F + +
Sbjct: 1878 LVLKDSLDRETKSKYELRIRVSD--GIQYTETYATIEVSDTNDNPPVFEETVYSFDIPE- 1934
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV--PSNLVVIVPQTGELLLTGD 177
+ + +G + A DAD +V+Y + +++ + PQTG L LT
Sbjct: 1935 ---------NAPRGYQVGQILAKDADLGQNAQVSYGVFSDWATDIFSLNPQTGMLTLTSR 1985
Query: 178 PPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIE 236
++V+ Y L V+A D PS + + N L D + D S + E
Sbjct: 1986 LDYEEVQHYILLVQAQDNGQPSL----STTITIYCNVLDLNDNA--PIFDPMSYSSEVFE 2039
Query: 237 KRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
+ + V + + D G + +++ +F+I D NG +R +
Sbjct: 2040 NAPIGKEV---ASVSAKDIDSGNNGLVAYSITAGDSDSEFEI---------DSNGTIRTR 2087
Query: 297 KRWDFE 302
+ D E
Sbjct: 2088 RHLDRE 2093
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 116/263 (44%), Gaps = 38/263 (14%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
S +++SG + V +G +DRE+ +Y L + +D G +A T +T+ + D+NDN+P F
Sbjct: 2964 SIDAQSGNITV-AGHLDREQQEEYILKVEVSD--GAWRAATPITITIQDQNDNAPEFEHS 3020
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELL 173
Y F +L+ S + +G + ATD D P++++ Q L+
Sbjct: 3021 FYSFSFPELQHS----------GALVGQIIATDRDKQG-------PNSVISYSLQQSSLM 3063
Query: 174 LTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL------QFNSPVLQDEQLLQM-ID 226
+ DP + ++ + V S+Y R P ++ P L E L+ + I
Sbjct: 3064 FSIDPATGEIFSKKMVHFRH----SQYVRSPENMYALTVLATDNGKPPLYSECLVNINIV 3119
Query: 227 RKSEAPHRIEKRRVT-----RAVRPTKRIDFSETDGEMEG--RIVFALEKETEREKFKIR 279
+ P + E+ + +A R K + TDG++ G I ++L F I
Sbjct: 3120 DAHKNPPKFERAKYLAPVPEKAGRGQKIVRVHATDGQLFGSNEIEYSLVSANLSSMFTIG 3179
Query: 280 DENPWITVDENGDVRVKKRWDFE 302
+ WI++ ++ + R++ +
Sbjct: 3180 THDGWISLAKSLSSPPQSRFELD 3202
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 127/296 (42%), Gaps = 60/296 (20%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFAL-KNPTTHEIRNSTESKSG 60
EN+ +GT V + ++ + + + R I GN+ F L K + H +R
Sbjct: 406 ENAANGTVVAAVSVIDSDDGLNGNTTTR--IVSGNEMGHFRLEKTGSLHIVR-------- 455
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFI 118
+G +DREE+ +Y+L + A D KG T H+ +DV D ND+ PVF + Y +
Sbjct: 456 ----VNGVLDREEIGKYNLTVVAMD-KGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAV 510
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL--VVIVPQTGELL 173
+ +L S K S + S++ATD D +V Y++ + L + P TG L+
Sbjct: 511 LSELAS----------KGSYVTSITATDGDTGVNAEVHYEILSGNELKWFSMDPLTG-LI 559
Query: 174 LTGDPPSDDV--EYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEA 231
+T P +V EL++ A D ++A + Q VL D EA
Sbjct: 560 VTAGPLDREVSDSVELSISARDGGPNPKFA------YTQLKVTVL---------DENDEA 604
Query: 232 PHRIEKR-RVT---RAVRPTKRIDFSETDGEM--EGRIVFALEKETER---EKFKI 278
P + VT A T + TD + G + FAL ER ++F I
Sbjct: 605 PQFAQSHLNVTLTENAPAQTLVAVLTATDHDQGTNGSVTFALAPSVERLYPQQFAI 660
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 59/143 (41%), Gaps = 13/143 (9%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
+Y I GN ++ F L T N + S + L T G++DRE Y L I+A D
Sbjct: 202 QYEIVAGNVDNKFRLATTT-----NPSGDTSYLHLETKGNLDRESRGSYQLNISARDGGS 256
Query: 89 INK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ V V +LD NDN P+F D SLN ++ +
Sbjct: 257 PPRFGFLQVNVTILDVNDNPPIFDHS-------DYNVSLNETALPGTPVVTVMASDNDLG 309
Query: 148 DGDKVAYKLAVPSNLVVIVPQTG 170
D K+ Y LA + + P+TG
Sbjct: 310 DNSKITYYLAETEHQFAVNPETG 332
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 51/91 (56%), Gaps = 14/91 (15%)
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRF 117
G+L VT +DRE A Y L ITA D +G +AET + V +LDENDNSP+F K Y
Sbjct: 2233 GLLRVTDA-LDRELRASYLLNITARD-RGEPPQEAETQLLVRILDENDNSPIFDPKQYSA 2290
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
V + N+++ + + VSATD D
Sbjct: 2291 SVAE-----NASIG-----AMVLQVSATDID 2311
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 18/130 (13%)
Query: 49 HEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDN 106
H +R +S++G++ TS +DREE A Y L + A D V + ++T+ V D NDN
Sbjct: 2539 HIMRFHIDSQTGII-TTSMPLDREETAVYHLTLMAQDSSVTEPRASSVNLTIQVGDVNDN 2597
Query: 107 SPVFSQKVYR-----------FIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYK 155
+P F Y F+ G L + L+ + ++ S+S D D ++ +
Sbjct: 2598 APSFDASRYTVTLPDRTSTGDFVFGALATDLDEAENAMVRY----SISGKDQDYFEINAR 2653
Query: 156 LAVPSNLVVI 165
V S VV+
Sbjct: 2654 TGVVSTKVVL 2663
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 51/120 (42%), Gaps = 30/120 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
V YS+ GN+ F+L T L + +DRE + LV+ A D
Sbjct: 1318 VYYSLAGGNEAGQFSLDGATGQ-------------LTLARRLDRESQEAHHLVVVARDAA 1364
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQ---------------KVYRFIVGDLKSSLNSNV 130
+K A T +T+ VLDENDN+P F+Q ++ RF D +NS V
Sbjct: 1365 LKDSLSANTTITIVVLDENDNAPEFTQSSSEVSVLETSPTGTELMRFRASDADQGVNSQV 1424
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 30/133 (22%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
YSI GN +F + +++SG + T+ +DREE A ++LVI A D+ G+
Sbjct: 3587 YSIINGNLKQSFRI------------DAQSGEI-TTAAHLDREETAHFNLVIGAIDM-GL 3632
Query: 90 --NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
V +D+ D NDN+P F+++ ++G + + S +SI +++A+D
Sbjct: 3633 PPQTGSATVRIDLEDVNDNAPTFTRE---GLMGYISENEPSG-------TSIMTLAASDP 3682
Query: 148 D----GDKVAYKL 156
D G +YKL
Sbjct: 3683 DLPRNGGPFSYKL 3695
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 16/94 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ ++RY+I+ GN+ F++ E G+++ D D + +Y L IT
Sbjct: 3264 PNGMLRYAISGGNELRKFSVD-----------ERTGGIVIRQPLDFDTTQ--EYHLNITV 3310
Query: 84 TDVKGIN--KAETHVTVDVLDENDNSPVFSQKVY 115
D+ G A +T+ + D NDN PVF+QK Y
Sbjct: 3311 QDL-GFQPLSAVAMLTIILTDVNDNPPVFAQKEY 3343
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 77/189 (40%), Gaps = 41/189 (21%)
Query: 57 SKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH----VTVDVLDENDNSPVF-- 110
+++GV+ T DIDRE + + L + ATD + + H VTV V D NDN+PVF
Sbjct: 1550 TETGVIY-TLRDIDREAIDTFRLTVVATDRAQPSDLQLHAEKLVTVIVEDINDNAPVFVS 1608
Query: 111 ------------SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAV 158
Q+V R D SS N G V+ G + ++L
Sbjct: 1609 MNAAMLPMTDQGPQQVMRVHARDADSSSN------------GLVTYEIVSGQQELFRLNR 1656
Query: 159 PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQD 218
+ +V P G V Y+LT++A D S R ++V++ +P
Sbjct: 1657 NTGIVTFTP--------GPQYKSKVRYQLTLKATDEAVQSE--RRSSEVYITIITPGFGG 1706
Query: 219 EQLLQMIDR 227
++ Q +
Sbjct: 1707 SEVPQFAQK 1715
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 82/180 (45%), Gaps = 33/180 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+R+SI G+ NH F + T GV+ V +++ E +++Y+L + A D
Sbjct: 2318 IRFSIVMGDLNHDFTISEDT------------GVVRVAK-NLNFERLSRYTLTVKAEDCD 2364
Query: 88 GINKAE--THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
N A +T+ +LD NDN P F Y V +++++ N + + +V A
Sbjct: 2365 LENPASDTAELTIIILDINDNRPTFLDSPYLARV--MENTVPPNGGY------VLTVKAY 2416
Query: 146 DADG----DKVAYKLA-VPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
DAD +V Y L ++L I +G++ L P D EY LT+ A D SP
Sbjct: 2417 DADSPPLNSQVRYFLKEGDTDLFRINASSGDISLL--KPLDRERQSEYILTLVAMDTGSP 2474
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 68/163 (41%), Gaps = 6/163 (3%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVG 120
L T +DRE A+Y + + A D + TV +V D NDN P F + Y + +G
Sbjct: 667 LTTRRFLDRESTARYEIPVIARDQGAPTPQSSTATVWLNVADVNDNDPEFYPQHYIYTLG 726
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPS-NLVVIVPQTGELLLTGDPP 179
D + K + + + D + Y L L + ++G L + D
Sbjct: 727 DDSRNDGHENGEGKILLHVTASDRDEGDNALIEYSLVSGGEGLFQLDARSGALRMHADVG 786
Query: 180 SDDVE--YELTVEAHDLQSPS-RYAREPAQVWLQFNSPVLQDE 219
+ V+ Y+L V A D P+ R ++ A V + S LQ E
Sbjct: 787 TTHVKPHYKLQVSARDHGQPAGRKSQRDAVVEIVLGSKALQLE 829
>gi|395816056|ref|XP_003781529.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Otolemur garnettii]
Length = 3374
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 76/152 (50%), Gaps = 19/152 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+G +D E+ ++Y L + A D G ++ ++TV V D NDN+P FSQ +Y+ +
Sbjct: 2410 TGPLDFEQCSRYHLQLLAHD--GPHEGCANLTVLVEDVNDNAPAFSQSLYQVTL------ 2461
Query: 126 LNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDD 182
+ H S+I SVSATD D ++Y LA P+ + P G L T + + D
Sbjct: 2462 ----LEHTPPGSAIISVSATDRDSGANGHISYHLASPAAGFSVDPNNGTLFTTVETVALD 2517
Query: 183 VE----YELTVEAHDLQSPSRYAREPAQVWLQ 210
E ++ +EA D +P R A+ V LQ
Sbjct: 2518 HEGPGVVDVVLEARDHGAPGRAAQAMVHVQLQ 2549
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 110/277 (39%), Gaps = 48/277 (17%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVIT 82
H V YSI GN F L+ P E L LV +D E + QY+L +
Sbjct: 2591 HAAVDYSIISGNRGRVFQLE-PRLAEAGEGVGPGPQALGCLVLLEPLDFESLTQYNLTVA 2649
Query: 83 ATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
A D + + VTV +LD NDN PVF+Q YR V + + + + + H
Sbjct: 2650 AADRGQPPRSSAVPVTVTILDVNDNPPVFTQASYRVAVPE-DTPVGAELLH--------- 2699
Query: 142 VSATDADGDK---VAYKLAV--PSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAH 192
V A+DAD V + L+ PS L + +G L L S D E ++L V+A
Sbjct: 2700 VEASDADPGPHGLVRFTLSSGDPSGLFELDESSGTLRLAH---SLDCETQARHQLVVQAA 2756
Query: 193 DLQSPSRYAREPAQVWLQ------------FNSPVLQDEQ-------LLQMIDRKSEAPH 233
D + +A P + +Q S L + Q L ID + A
Sbjct: 2757 DPAG-AHFALAPVTIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGDAGAFG 2815
Query: 234 RIEKRRVTRAVRPTKRIDFS--ETDGEMEGRIVFALE 268
R+ + P R F+ + GE+ R+ F E
Sbjct: 2816 RLHYSLLEAGPGPEGREAFALNSSTGELRARVPFDYE 2852
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 86/204 (42%), Gaps = 20/204 (9%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V I P+ + YS+ Q +++ +P T E
Sbjct: 1192 ENQPPGTSVGR--IFATDRDSGPNGRLTYSLQQLSEDSKAFRIHPQTGE----------- 1238
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
+ T +DRE+ + Y L++ D ++ T V + VLD NDNSP F Q G
Sbjct: 1239 -MTTLQILDREQQSSYQLLVQVQDAGNPPRSTTGTVHIAVLDLNDNSPTFLQ-ASGAAGG 1296
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGELLLTGDP- 178
L + VS +++ + + + V Y L P S L + P +GE LLT P
Sbjct: 1297 GLPIQVPDRVSPGTLVTTLQAKDPDEGENGTVLYTLTGPGSELFSLHPHSGE-LLTAAPL 1355
Query: 179 -PSDDVEYELTVEAHDLQSPSRYA 201
+ Y LT+ AHD SP R A
Sbjct: 1356 IREERPHYVLTLSAHDQGSPPRSA 1379
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 25/131 (19%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LVR++++ G+ + F L + SG L + +D E A++ LV+ A
Sbjct: 2709 PHGLVRFTLSSGDPSGLFEL------------DESSGTLRLAH-SLDCETQARHQLVVQA 2755
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G + A VT++V D ND+ P F + L +SL N +++ ++
Sbjct: 2756 ADPAGAHFALAPVTIEVQDVNDHGPAFPLNL-------LSTSLAENQPPGTLVTTLHAI- 2807
Query: 144 ATDADGDKVAY 154
DGD A+
Sbjct: 2808 ----DGDAGAF 2814
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 24 PHQLV-RYSITQGNDNH----TFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYS 78
P QLV R S++ +D +L+ H N+ +S L+ + +DREE Y+
Sbjct: 457 PGQLVARISVSDPDDGDFAHVNVSLEGGEGHFALNTQDSVI-YLVCVARRLDREERDAYN 515
Query: 79 LVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYR 116
L +TATD +AE + V D NDN+P F +++YR
Sbjct: 516 LRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYR 554
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 98/250 (39%), Gaps = 35/250 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIVG 120
L T+ +DRE+ Y+ ++A D T VT+ V D ND++P F R +
Sbjct: 1987 LRTAIALDREQCPSYTFSVSAVDGAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLP 2046
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA-VPSNLVVIVPQTGELLLTG 176
L++ + ++ A D D + Y+LA P ++ TGE+ +
Sbjct: 2047 RPGPILSTPT------LPLATLRAEDRDAGANASILYRLAGTPPPGTIVDSYTGEIRVAR 2100
Query: 177 DP----PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
P P D V L + A DL P+R A + LQ S E+ + SEA
Sbjct: 2101 SPVALTPRDRV---LFIVATDLGRPARSATGVIIIGLQGES-----ERGPRFPRASSEAM 2152
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGD 292
R T V P K I G G I +++ E+ F I+ IT
Sbjct: 2153 LRENAPPGTPIVSP-KAIHA----GGSNGPITYSILSGNEKGTFSIQPSTGTIT------ 2201
Query: 293 VRVKKRWDFE 302
VR + DFE
Sbjct: 2202 VRSAEGLDFE 2211
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y + G D H F L S +G L V +DRE+ A++ L + A+D
Sbjct: 1656 VSYRLAAGGDGH-FRL------------HSSTGALSVVR-PLDREQQAEHILTVVASDHG 1701
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIV 119
++ T V T+ V D ND +P F Q+ Y ++
Sbjct: 1702 SPPRSATQVLTISVADVNDEAPAFQQQEYSVLL 1734
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGI-NKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +G++DRE + Y L + A D +A+ + + +LD ND++P F+Q Y +V +
Sbjct: 283 LVVTGELDRENRSHYMLQLEAYDGGSPPRRAQALLDITLLDINDHAPAFNQSRYHAVVSE 342
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDA 147
SL + F+S A A
Sbjct: 343 ---SLAPGSPVLQVFASDADAGANGA 365
>gi|313224590|emb|CBY20381.1| unnamed protein product [Oikopleura dioica]
Length = 974
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 89/176 (50%), Gaps = 20/176 (11%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+ +D E +++ + I A D + K ET V ++VLDENDN P F Q Y F
Sbjct: 500 LIALQSLDAELNSRHVIRIIAVDRGSPSLKGETSVVINVLDENDNDPAFEQVEYDF---- 555
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD-KVAYKLAVPSNLVVIVPQTGELLL--TGDP 178
S N + +IG+V+A DAD + +V Y+LA S I PQTG + L + D
Sbjct: 556 ---SFPENTEEGE---TIGTVAAIDADKNSEVRYRLASNSVPFRISPQTGSITLQRSIDA 609
Query: 179 PSDDVEYELTVEAHDLQSPSRYAREPAQVW-LQFNSPVL----QDEQLLQM-IDRK 228
D+ +YE+ + A D+ S A V + N+PVL D ++Q+ +DRK
Sbjct: 610 DIDNTKYEIMIIAEDIDGRSATASGTIIVNDINDNAPVLIWPNPDLDVIQVTLDRK 665
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 70/149 (46%), Gaps = 20/149 (13%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
+ +++ ND+ F L+N + +E +G +L + +DRE V Y + + A D
Sbjct: 369 KLNVSLVNDDGDFELEN------MSDSEGSNGYILKVAKPLDRERVHLYRIDLRAADNGS 422
Query: 89 INKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
T +++ V D NDN+P F + +Y + + N+NV SI S+ ATD
Sbjct: 423 PPLTTTKTISIKVEDVNDNAPFFQRDMYHVNILE-----NNNVGK-----SIVSLKATDF 472
Query: 148 D---GDKVAYKLAVPSNLVVIVPQTGELL 173
D ++ Y L S+ + TG+L+
Sbjct: 473 DEGQNAEIEYILGEESSFFSLERGTGDLI 501
>gi|7506591|pir||T15273 hypothetical protein R10F2.2 - Caenorhabditis elegans
Length = 620
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 29/179 (16%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV-K 87
R+ I QGN N+ F L + +E + LV +G +DRE +Y L+I A D K
Sbjct: 137 RFVILQGNVNNVFKLASRKVNEQLQAD-------LVVNGQLDREFRDKYELLIEAQDGGK 189
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ +++++D NDN+PVFS+ Y +S+++N+S S + +V ATDA
Sbjct: 190 PAKIGQLRCSIEIIDANDNAPVFSRSRY-------TASVSANISIG---SHLITVQATDA 239
Query: 148 D---GDKVAY---KLAVPSNLVVIVPQTGELLLTGD--PPSDDVEYELTVEAHDLQSPS 198
D +++Y K + PSN + Q+G + T P S +++ V A D SPS
Sbjct: 240 DIGENSRISYDIKKTSAPSNSNFAISQSGVITTTASLLPAS---THDVIVVASDHGSPS 295
>gi|71989522|ref|NP_497641.2| Protein CDH-1 [Caenorhabditis elegans]
gi|373220104|emb|CCD72204.1| Protein CDH-1 [Caenorhabditis elegans]
Length = 2779
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 29/179 (16%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV-K 87
R+ I QGN N+ F L + +E + LV +G +DRE +Y L+I A D K
Sbjct: 158 RFVILQGNVNNVFKLASRKVNEQLQAD-------LVVNGQLDREFRDKYELLIEAQDGGK 210
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ +++++D NDN+PVFS+ Y +S+++N+S S + +V ATDA
Sbjct: 211 PAKIGQLRCSIEIIDANDNAPVFSRSRY-------TASVSANISIG---SHLITVQATDA 260
Query: 148 D---GDKVAY---KLAVPSNLVVIVPQTGELLLTGD--PPSDDVEYELTVEAHDLQSPS 198
D +++Y K + PSN + Q+G + T P S +++ V A D SPS
Sbjct: 261 DIGENSRISYDIKKTSAPSNSNFAISQSGVITTTASLLPAS---THDVIVVASDHGSPS 316
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 21/162 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITA-TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L +G IDRE+ A + + ++ K + V VLDENDN PVF+ Y
Sbjct: 2182 LFVAGPIDREQRATHEFQVEIDNEMMTSQKVQCKCHVIVLDENDNLPVFTSVAYYL---- 2237
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPS--NLVVIVPQTGELLLT- 175
SL +++H +K IG + A+D D +V+Y++ + N+V + P TG + L
Sbjct: 2238 ---SLKDSMAHGQK---IGQIMASDQDSGENGRVSYRILSGNDLNIVTLNPDTGSIQLNE 2291
Query: 176 -GDPPSDD---VEYELTVEAHDLQSPSRYAREPAQVWLQFNS 213
D D+ +++ VEA D P+R A QV L+ +S
Sbjct: 2292 WNDAQLDEFPNATWQILVEARDHGHPARAAVGKVQVSLKMSS 2333
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 14/143 (9%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D E + +++L I ATD G T++T+ V D NDN+P FS+ +Y+ V +
Sbjct: 1990 LDFEVLPEHTLTIKATD--GSFDTFTNLTIFVSDINDNAPTFSKPLYQTTVSP------A 2041
Query: 129 NVSHWKKFSSIGSVSATDADG-DKVAYKLAVPSNLVV-IVPQTGELLLTGDPPSDDVEYE 186
S + F+ I A D D + Y L S+ + + P++G L + PP+ + Y
Sbjct: 2042 TFSPGQPFAKI---EAHDLDARGALTYSLGQGSSSIFRVAPESGALFMKVLPPAGE-RYL 2097
Query: 187 LTVEAHDLQSPSRYAREPAQVWL 209
+TV A D PS P V +
Sbjct: 2098 VTVTATDNGVPSFSTSVPVSVII 2120
>gi|297674808|ref|XP_002815402.1| PREDICTED: protocadherin Fat 1 [Pongo abelii]
Length = 4588
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 123/287 (42%), Gaps = 44/287 (15%)
Query: 23 HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVIT 82
H V Y I GN F + NP SG + +T +D E + Y+L+I
Sbjct: 1692 HSQSSVVYEIKDGNIGDAFDI-NP-----------HSGTI-ITQKALDFETLPIYTLIIQ 1738
Query: 83 ATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
T++ G++ T V V + DENDNSPVF Q Y ++ + +S+NS V + + +
Sbjct: 1739 GTNMAGLS-TNTTVLVHLQDENDNSPVFMQAEYTGLISE-SASINSVVLTDRNIPLV--I 1794
Query: 143 SATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQ 195
ATDAD D + Y + PS I TG + +L+ D + + TV+ HD+
Sbjct: 1795 RATDADKDSNALLVYHIVEPSVHKYFAIDSSTGAIHTVLSLDYEETSI-FHFTVQVHDMG 1853
Query: 196 SPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKR------ 249
+P +A A V + +ID P + + PT +
Sbjct: 1854 TPRLFAEYAANV-------------TVHVIDINDCPPVFAKPLYEASLLLPTYKGVKVIT 1900
Query: 250 IDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
++ ++ D ++++++ + EKF + + +TV +R +
Sbjct: 1901 VNATDADSSAFSQLIYSITEGNIGEKFSMDYKTGALTVQNTTQLRSR 1947
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + HP VRY I G+ + F + + +R T+
Sbjct: 45 ENSAAKTYV-GHPVKMGIYITHPSWEVRYKIVSGDSENLFKAEEYILGDFCFLRIRTKGG 103
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A T V V VLD ND P+FS Y
Sbjct: 104 NTAIL------NREVKDHYTLIVKALEKNTNVEARTKVRVQVLDTNDLRPLFSPTSYSV- 156
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 157 ------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGVIVLT 207
Query: 176 G 176
G
Sbjct: 208 G 208
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 32/199 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + YSI GN++ F++ +SK+G + + +
Sbjct: 3246 GTEVLQVYAASRDIEANAEITYSIISGNEHGKFSI------------DSKTGAVFIIE-N 3292
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L + ATD ++ T V ++V D NDN+PVFSQ Y ++ + + L
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVAT-VNINVTDINDNTPVFSQDTYTTVISE-DAVL 3350
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
S+ +V A DADG + Y + + I P GE+ +T +
Sbjct: 3351 E---------QSVITVMADDADGPSNSHIHYSIVDGNQGSSFTIDPVRGEVKVTKLLDRE 3401
Query: 182 DVE-YELTVEAHDLQSPSR 199
+ Y LTV+A D SP R
Sbjct: 3402 TISGYTLTVQASDNGSPPR 3420
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1174 LMYKITSGNPQGFFSI------------HPKTGLITTTSRKLDREQQDEHILEVTVTDNG 1221
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRF 117
K+ V V +LDENDN P F QK Y+
Sbjct: 1222 SPPKSTIARVIVKILDENDNKPQFLQKFYKI 1252
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN +F + +P E++ + +DRE ++ Y+L + A+D
Sbjct: 3370 IHYSIVDGNQGSSFTI-DPVRGEVK------------VTKLLDRETISGYTLTVQASDNG 3416
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+P+FS+ Y I+
Sbjct: 3417 SPPRVNTTTVNIDVSDVNDNAPIFSRGNYSVII 3449
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 78/173 (45%), Gaps = 32/173 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N I+N + + +DRE+ Y L ITATD
Sbjct: 2954 VTYFITGGDPLGQFAVEN-----IQNEWK------VYVKKPLDREKRDNYLLTITATD-- 3000
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G ++ V V VLD NDNSPV + +Y ++ +V K I +SATDA
Sbjct: 3001 GTFSSKAVVEVKVLDANDNSPVCEKTLY-------SDTIPEDVLPGKL---IMQISATDA 3050
Query: 148 D---GDKVAYK-LAVPSNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHD 193
D ++ Y L + + P TGEL + P D E Y L V A D
Sbjct: 3051 DIRSNAEITYTLLGSGAEKFKLNPDTGELRTS--TPLDREEQAVYHLLVRATD 3101
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 103/250 (41%), Gaps = 36/250 (14%)
Query: 50 EIRNSTESKSGV----------LLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVT 97
EI S SGV ++ TS +DRE + Y L + ATD +G+ + +
Sbjct: 1068 EIHYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSHYWLTVFATD-QGVVPLSSFIEIY 1126
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAY 154
++V D NDN+P S+ VY + + + K S+ + A D D DK+ Y
Sbjct: 1127 IEVEDVNDNAPQTSEPVYYPEI----------MENSPKDVSVVQIEAFDPDSSSNDKLMY 1176
Query: 155 KLAV--PSNLVVIVPQTGELLLTG---DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL 209
K+ P I P+TG + T D D E+ L V D SP + A+V +
Sbjct: 1177 KITSGNPQGFFSIHPKTGLITTTSRKLDREQQD-EHILEVTVTDNGSPPK--STIARVIV 1233
Query: 210 QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVR-PTKRIDFSETDGEMEGRIVFALE 268
+ Q LQ K P R + R A R P R+ ++ D I +++E
Sbjct: 1234 KILDENDNKPQFLQKF-YKIRLPEREKPDRERNARREPLYRVIATDKDEGPNAEISYSIE 1292
Query: 269 KETEREKFKI 278
E KF I
Sbjct: 1293 DGNEHGKFFI 1302
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E+ Q+++ + A D G+ ++ VTVDV D NDN P+F Q++Y ++ +
Sbjct: 2348 LDYEQSRQHTIFVRAVD-GGMPPLSSDVIVTVDVTDLNDNPPLFEQQIY-------EARI 2399
Query: 127 NSNVSHWKKFSSIGSVSATDADGDKVAYKL 156
+ + H + + + A +D DK+ Y +
Sbjct: 2400 SEHAPHGHFVTCVKAYDADSSDIDKLQYSI 2429
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 15/127 (11%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+ R++ A + L +T +D KA T V V VL N N P F+Q Y K++ +
Sbjct: 426 VKRQQAAHFELEVTTSD----RKASTKVLVKVLGANSNPPEFTQTAY-------KAAFDE 474
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT 188
NV S+ +V + + V Y +A ++ VP + S++++YEL
Sbjct: 475 NVPIGTTVMSLSAVDPDEGENGYVTYSIANLNH----VPFAIDHFTGAVSTSENLDYELM 530
Query: 189 VEAHDLQ 195
+ L+
Sbjct: 531 PRVYTLR 537
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 40/85 (47%), Gaps = 14/85 (16%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET 94
G+ F L NP T E+R ST +DREE A Y L++ ATD G +
Sbjct: 3064 GSGAEKFKL-NPDTGELRTSTP------------LDREEQAVYHLLVRATDGGG-RFCQA 3109
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIV 119
+ + + D NDN+P FS Y V
Sbjct: 3110 SIVLTLEDVNDNAPEFSVDPYAVTV 3134
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 126/288 (43%), Gaps = 62/288 (21%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ GN++ F + + ++G+L + S +DRE +Y+L +T D+
Sbjct: 754 YAVSGGNEDSCFMI------------DMETGMLKILS-PLDRETADKYTLNVTVYDLGIP 800
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
KA + V V+D NDN P F Q+ Y V + K + S I V ATD D
Sbjct: 801 QKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDK----------EVHSEIIQVEATDKD 850
Query: 149 ---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYE--LTVEAHDLQSPSRYARE 203
V Y + ++ I TG + +T P ++++E L +EA D ARE
Sbjct: 851 LGPNGHVTYSILTDTDAFSIDSVTGVVKIT-RPLDRELQHEHYLKIEARD------QARE 903
Query: 204 PAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRI 263
Q+ F++ +L+ + + D P + + P R+ E EG +
Sbjct: 904 EPQL---FSTVILK----VSLEDVNDNPP---------KFIPPNYRVKVRE--DLPEGTV 945
Query: 264 VFALEK------ETEREKFKIRDENPW-ITVDE-NGDVRVKKRWDFEE 303
+ LE ++ + ++ + D VD+ +G VR+ ++ DFE+
Sbjct: 946 IMWLEAQDPDLGQSGQVRYSLMDHGEGNFDVDKLSGAVRIVQQLDFEK 993
>gi|332234442|ref|XP_003266417.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Nomascus
leucogenys]
Length = 4007
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 29/223 (13%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G PIL+ S+ V Y + +GN + F++ S SG L+ T ++D
Sbjct: 1676 GSPILLVSAMSSSE--VTYELREGNKDGVFSMN------------SYSG-LISTQKNLDH 1720
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E+++ Y L I +++ G + V VD++DENDN+P+F + + VG + +
Sbjct: 1721 EKISSYQLKIRGSNMAGA-FTDVMVVVDIIDENDNAPMFLKSTF---VGQISEAAPLYSM 1776
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EY 185
K ++ + A+D+D + + YK+ P L I P G L + + + + +
Sbjct: 1777 IMDKNNNPFVIHASDSDKEANSLLVYKILEPEALKFFKIDPSMGTLTIVSEMDYESMPSF 1836
Query: 186 ELTVEAHDLQSPSRYAREPAQVWLQF----NSPVLQDEQLLQM 224
+ V HD SP ++ PAQV + +SP EQ+ ++
Sbjct: 1837 QFCVYVHDQGSPILFSPRPAQVIIHVRDVNDSPPRFSEQIYEV 1879
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 79/178 (44%), Gaps = 32/178 (17%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS+ G V L L A + Q+ Y IT+G+ F + E R S+
Sbjct: 2575 VENSEPGELVATLKTLDADISEQNRQVTCY-ITEGDPLGQFGISQ-VGDEWRISSRKT-- 2630
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+DRE A+Y L +TA+D G +A V + VLD NDNSP SQ +Y V
Sbjct: 2631 --------LDREHTAKYLLRVTASD--GKFQASVTVEIFVLDVNDNSPQCSQLLYTGKV- 2679
Query: 121 DLKSSLNSNVSHWKKFSS--IGSVSATDADGD---KVAYKLAVP-SNLVVIVPQTGEL 172
H F I VSATD D D ++ Y L P ++ + P TGEL
Sbjct: 2680 -----------HEDVFPGHFILKVSATDLDTDTNAQITYSLHGPGAHEFKLDPHTGEL 2726
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLV 80
P VRY I G+ + F + +R T+S + LL +RE Y+L+
Sbjct: 65 PQWAVRYRIISGDVANVFKTEEYVVGNFCFLRIRTKSSNTALL------NREVRDSYTLI 118
Query: 81 ITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD---LKSSLNSNVSHWKKFS 137
I AT+ +A T V V +LD+ND P+FS YR + + LK S
Sbjct: 119 IQATEKTLELEALTRVVVYILDQNDLKPLFSPPSYRVTISEDMPLK-------------S 165
Query: 138 SIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTG 176
I V+ATDAD + A Y S + I P +G + + G
Sbjct: 166 PICKVTATDADLGQNAEFYYAFNTRSEMFAIHPTSGVVTVAG 207
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 96/205 (46%), Gaps = 33/205 (16%)
Query: 26 QLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
++V +T N + LK P++ + +++G L+ T+ +D + A Y L I +
Sbjct: 380 RVVMVRVTPAFPNLQYVLK-PSSENVGFKLNARTG-LITTTKLMDFHDRAHYQLHIRTSP 437
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+A T V +D++D N+++P+F++ Y +L+ N+ +S+ +V+AT
Sbjct: 438 ----GQASTTVVIDIVDCNNHAPLFNRSSY-------DGTLDENI---PPGTSVLAVTAT 483
Query: 146 DADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT-------VEAHDLQ 195
D D + V Y +A P L + ++ T P ++YEL V A D
Sbjct: 484 DRDHGENGYVTYSIAGPKALPFSIDPYLGIISTSKP----MDYELMKRIYTFRVRASDWG 539
Query: 196 SPSRYAREPAQVWLQFNSPVLQDEQ 220
SP R +E ++LQ + L D Q
Sbjct: 540 SPFRREKE-VSIFLQLRN--LNDNQ 561
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 22/166 (13%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN+ F + E ++G LL + +D E Y L +T D+
Sbjct: 752 YVIADGNEEGCFDI------------ELETG-LLTVAAPLDYEATNFYILNVTVYDLGTP 798
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K+ +TV+V D NDN+P RF G + +++ + + + + A D
Sbjct: 799 QKSSWKLLTVNVKDWNDNAP-------RFPPGGYQLTISEDTEVGTTVAELTTKDADSED 851
Query: 149 GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD-DVEYELTVEAHD 193
+V Y L P+ + P TGEL++TG + + Y L VEA D
Sbjct: 852 NGRVRYTLLSPTEKFSLHPLTGELVVTGHLDRESEPRYILKVEARD 897
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 31/123 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ ++IT GN + F + +P T LL T+ +DRE ++ L +T D
Sbjct: 1172 LTFNITSGN-HMGFFMIHPVTG------------LLSTAQQLDRENKDEHILEVTVLDNG 1218
Query: 88 GIN-KAETHVTVDVLDENDNSPVFSQK-----------------VYRFIVGDLKSSLNSN 129
+ K+ + V V +LD NDN PVFS K VYR + DL LN
Sbjct: 1219 EPSLKSTSRVVVGILDVNDNPPVFSHKLFNVRLPERLSPVSPGPVYRLVASDLDEGLNGR 1278
Query: 130 VSH 132
V++
Sbjct: 1279 VTY 1281
>gi|350581203|ref|XP_003480987.1| PREDICTED: protocadherin beta-16 [Sus scrofa]
Length = 598
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 63/122 (51%), Gaps = 21/122 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DREE A+Y++ I+ +D+ + H +TV V D NDN+P FSQ Y V +
Sbjct: 403 LVTERPLDREERAEYNITISVSDLGTPRRHTQHNLTVRVADVNDNAPAFSQPAYTLRVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H +G+V ATDAD ++ Y L PS+ LV I P TG+
Sbjct: 463 ----NNSPALH------VGTVRATDADAGANAQLTYSLLPPSDPHLPLASLVAINPDTGQ 512
Query: 172 LL 173
L
Sbjct: 513 LF 514
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 78/153 (50%), Gaps = 22/153 (14%)
Query: 52 RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVF 110
RN ++ + LV ++DREE + SL++TA D + T + ++V+D NDN+P F
Sbjct: 183 RNRSDGRKYPELVLDKELDREEEPEISLILTALDGGSPPRYGTAQLRIEVVDSNDNAPEF 242
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP----SNLV 163
Q +Y+ V + NS V S + +VSATDAD K++Y P S +
Sbjct: 243 EQSLYKVHVPE-----NSPVG-----SLVVTVSATDADSGVYGKISYTFFQPSEDISKTL 292
Query: 164 VIVPQTGELLLTGDPPSDDVEYELTVEAHDLQS 196
+ P TGE+ L D E EL+ E DL++
Sbjct: 293 EVNPMTGEIRLRK---QLDFETELSYEV-DLKA 321
>gi|395817812|ref|XP_003782342.1| PREDICTED: uncharacterized protein LOC100955282 [Otolemur garnettii]
Length = 1760
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 74/148 (50%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ ITATD+ K + ++TV V D NDN+P F+Q Y V +
Sbjct: 1059 LVTEGGLDRESQAEYNITITATDLGTPRLKTQLNITVLVSDINDNAPAFTQTSYTLFVRE 1118
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IG++SATD D +VAY L P ++LV I G
Sbjct: 1119 ----NNSPALH------IGTISATDRDSGTNAQVAYSLLPPQDPHLPLASLVSINADNGH 1168
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 1169 LFALRALDYEALQAFEFRVGATDRGSPA 1196
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIV 119
LVT G +DRE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V
Sbjct: 401 LVTEGALDRELRAEYNITITVTDLGTPRLKTEQNITVLVSDVNDNAPAFTQTSYTLFV 458
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV ++DREEVA+ L +TA D ++ T + + VLD NDN+P F+Q +Y+ V +
Sbjct: 850 LVLDKELDREEVAELRLTLTALDGGSPQRSGTSQIRIVVLDINDNAPEFAQTLYKAQVPE 909
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVV----IVPQTGELLL 174
NS V S + VSA D D +++Y L S + + TGE+ L
Sbjct: 910 -----NSPVG-----SLVVKVSARDLDAGTNGQISYSLFYSSQEISKTFELSSFTGEIRL 959
Query: 175 TGDPPSDDV-EYELTVEAHD 193
+ + YEL +EA D
Sbjct: 960 IKKLDFETISSYELDIEASD 979
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 14/107 (13%)
Query: 46 PTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVL 101
P++H RN E + LV +DREE ++ L +TA D K+ T V +D+L
Sbjct: 172 PSSHFHVLTRNDGEGRKYPELVLDKALDREEQSELRLTLTAVDGGAPPKSGTALVLIDIL 231
Query: 102 DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
D NDN+P F+Q +Y+ + + NS + S + +VSA D D
Sbjct: 232 DINDNAPEFAQPLYQVQISE-----NSPLE-----SVVATVSARDLD 268
>gi|354501665|ref|XP_003512910.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16-like [Cricetulus
griseus]
Length = 3070
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+G +D E+ Y L + A D G ++ ++TV V D NDN+P FSQ +Y+ ++
Sbjct: 2106 TGPLDFEQCDHYHLQLLAHD--GPHEGHANLTVLVEDVNDNAPTFSQSLYQVMM------ 2157
Query: 126 LNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDD 182
+ H S+I SVSATD D ++Y LA P + P G L T +
Sbjct: 2158 ----LEHTPPGSAILSVSATDRDSGANGHISYHLASPGEGFSVDPNNGTLFTTVGAVALG 2213
Query: 183 VE----YELTVEAHDLQSPSRYAREPAQVWLQ 210
E ++ +EA D +P R AR V LQ
Sbjct: 2214 QEGPGVVDVVLEARDHGAPGRVARATVHVQLQ 2245
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVIT 82
H V YSI GN F L+ P E S L LV +D E + QY+L +
Sbjct: 2287 HATVDYSIISGNRGRVFQLE-PRLTEAGEGVGSGPQALGCLVLLEPLDFESLTQYNLTVA 2345
Query: 83 ATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
A D + + VTV VLD NDN PVF+Q YR V
Sbjct: 2346 AADRGQPPRSSAVPVTVTVLDVNDNPPVFTQASYRVTV 2383
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 13/87 (14%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LVR++++ G+ F L + SG L + +D E A++ LV+ A
Sbjct: 2405 PHGLVRFTLSSGDPLGLFEL------------DENSGALRLAH-PLDCETQARHQLVVQA 2451
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVF 110
D G + A VTV+VLD ND+ P F
Sbjct: 2452 ADPAGTHFALVPVTVEVLDVNDHGPAF 2478
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 98/244 (40%), Gaps = 34/244 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V + P+ + YS+ Q +++ +P T E+
Sbjct: 1112 ENQPPGTSVGR--VFATDRDSGPNGRLTYSLRQLSEDSKAFRIHPQTGEV---------- 1159
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
T +DRE + + L++ D ++ T V + VLD NDNSP F Q G
Sbjct: 1160 --TTLQSLDREHQSSFQLLVHVQDSGSPPRSTTGTVHIAVLDLNDNSPTFLQ-ASGAAGG 1216
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGEL-----LL 174
L + V +++ + + + + Y L P S L + P TGEL L+
Sbjct: 1217 GLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFSLHPHTGELHTAASLI 1276
Query: 175 TGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQF------NSPVLQDEQLLQMIDRK 228
+ P Y LT+ AHD SP R A Q+ +Q N+PV +++ + +
Sbjct: 1277 RAERP----HYVLTLSAHDQGSPPRSAS--LQLLVQXVTDENDNAPVFASPSRVRLPEDQ 1330
Query: 229 SEAP 232
P
Sbjct: 1331 PPGP 1334
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 103/270 (38%), Gaps = 47/270 (17%)
Query: 43 LKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHV--TVDV 100
L PT+ E+R +T +DRE A Y+ + A D T V T+ V
Sbjct: 1675 LLEPTSGELRTATA------------LDREHCASYAFSVNAVDGAAAGPLSTTVPITITV 1722
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA 157
D ND++P F R + SL+ + ++ ++ A D D + Y+LA
Sbjct: 1723 RDVNDHAPTFPTSPLRLRLPRSVPSLS------RPTLALATLRAEDRDAGANASILYRLA 1776
Query: 158 -VPSNLVVIVPQTGELLLTGDP----PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFN 212
P + TGE+ + P P D V L + A DL P+R A V +Q
Sbjct: 1777 GTPPPGTTVDSYTGEIRVARSPVALGPRDRV---LFIVATDLGRPARSATGVVIVGIQGE 1833
Query: 213 SPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETE 272
S E+ + +EA R T + P + G G I +++ E
Sbjct: 1834 S-----ERGPRFPRTSNEAVLRENAPPGTPVISPK-----AVHSGGSNGPITYSILSGNE 1883
Query: 273 REKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ F I+ IT VR + DFE
Sbjct: 1884 KGIFSIQPSTGAIT------VRSAEGLDFE 1907
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 402 EGGEGH-FAL----------STQDSVIYLVCVARRLDREERDVYNLRVTATDSGSPPLRA 450
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + V D NDN+P F +++YR
Sbjct: 451 EAAFVLHVTDVNDNAPAFDRQLYR 474
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ TF L E R LV GD+DRE + Y L + A D
Sbjct: 176 YALSGDGAGETFRL------ETRPGPNGAPVPELVVVGDLDRENRSHYMLQLEAYDGGSP 229
Query: 90 -NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+A+ + V +LD ND++P F+Q Y +V + SL + F+S A A
Sbjct: 230 PRRAQALLDVTLLDINDHAPAFNQSRYHAVVSE---SLAPGSPVLQVFASDADAGANGA 285
>gi|344257579|gb|EGW13683.1| Protocadherin-16 [Cricetulus griseus]
Length = 3015
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+G +D E+ Y L + A D G ++ ++TV V D NDN+P FSQ +Y+ ++
Sbjct: 2051 TGPLDFEQCDHYHLQLLAHD--GPHEGHANLTVLVEDVNDNAPTFSQSLYQVMM------ 2102
Query: 126 LNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDD 182
+ H S+I SVSATD D ++Y LA P + P G L T +
Sbjct: 2103 ----LEHTPPGSAILSVSATDRDSGANGHISYHLASPGEGFSVDPNNGTLFTTVGAVALG 2158
Query: 183 VE----YELTVEAHDLQSPSRYAREPAQVWLQ 210
E ++ +EA D +P R AR V LQ
Sbjct: 2159 QEGPGVVDVVLEARDHGAPGRVARATVHVQLQ 2190
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVIT 82
H V YSI GN F L+ P E S L LV +D E + QY+L +
Sbjct: 2232 HATVDYSIISGNRGRVFQLE-PRLTEAGEGVGSGPQALGCLVLLEPLDFESLTQYNLTVA 2290
Query: 83 ATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
A D + + VTV VLD NDN PVF+Q YR V
Sbjct: 2291 AADRGQPPRSSAVPVTVTVLDVNDNPPVFTQASYRVTV 2328
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 13/87 (14%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LVR++++ G+ F L + SG L + +D E A++ LV+ A
Sbjct: 2350 PHGLVRFTLSSGDPLGLFEL------------DENSGALRLAH-PLDCETQARHQLVVQA 2396
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVF 110
D G + A VTV+VLD ND+ P F
Sbjct: 2397 ADPAGTHFALVPVTVEVLDVNDHGPAF 2423
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 84/207 (40%), Gaps = 26/207 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V + P+ + YS+ Q +++ +P T E+
Sbjct: 1112 ENQPPGTSVGR--VFATDRDSGPNGRLTYSLRQLSEDSKAFRIHPQTGEV---------- 1159
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
T +DRE + + L++ D ++ T V + VLD NDNSP F Q G
Sbjct: 1160 --TTLQSLDREHQSSFQLLVHVQDSGSPPRSTTGTVHIAVLDLNDNSPTFLQ-ASGAAGG 1216
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGEL-----LL 174
L + V +++ + + + + Y L P S L + P TGEL L+
Sbjct: 1217 GLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFSLHPHTGELHTAASLI 1276
Query: 175 TGDPPSDDVEYELTVEAHDLQSPSRYA 201
+ P Y LT+ AHD SP R A
Sbjct: 1277 RAERP----HYVLTLSAHDQGSPPRSA 1299
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 103/270 (38%), Gaps = 47/270 (17%)
Query: 43 LKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHV--TVDV 100
L PT+ E+R +T +DRE A Y+ + A D T V T+ V
Sbjct: 1620 LLEPTSGELRTATA------------LDREHCASYAFSVNAVDGAAAGPLSTTVPITITV 1667
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA 157
D ND++P F R + SL+ + ++ ++ A D D + Y+LA
Sbjct: 1668 RDVNDHAPTFPTSPLRLRLPRSVPSLS------RPTLALATLRAEDRDAGANASILYRLA 1721
Query: 158 -VPSNLVVIVPQTGELLLTGDP----PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFN 212
P + TGE+ + P P D V L + A DL P+R A V +Q
Sbjct: 1722 GTPPPGTTVDSYTGEIRVARSPVALGPRDRV---LFIVATDLGRPARSATGVVIVGIQGE 1778
Query: 213 SPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETE 272
S E+ + +EA R T + P + G G I +++ E
Sbjct: 1779 S-----ERGPRFPRTSNEAVLRENAPPGTPVISPK-----AVHSGGSNGPITYSILSGNE 1828
Query: 273 REKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ F I+ IT VR + DFE
Sbjct: 1829 KGIFSIQPSTGAIT------VRSAEGLDFE 1852
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 402 EGGEGH-FAL----------STQDSVIYLVCVARRLDREERDVYNLRVTATDSGSPPLRA 450
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + V D NDN+P F +++YR
Sbjct: 451 EAAFVLHVTDVNDNAPAFDRQLYR 474
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 51/119 (42%), Gaps = 10/119 (8%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ TF L E R LV GD+DRE + Y L + A D
Sbjct: 176 YALSGDGAGETFRL------ETRPGPNGAPVPELVVVGDLDRENRSHYMLQLEAYDGGSP 229
Query: 90 -NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+A+ + V +LD ND++P F+Q Y +V + SL + F+S A A
Sbjct: 230 PRRAQALLDVTLLDINDHAPAFNQSRYHAVVSE---SLAPGSPVLQVFASDADAGANGA 285
>gi|326429811|gb|EGD75381.1| cadherin [Salpingoeca sp. ATCC 50818]
Length = 3697
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 66/139 (47%), Gaps = 23/139 (16%)
Query: 69 IDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
++RE +S + A+D +A +TV + DENDN+PVFS Y F SL
Sbjct: 2166 LNREAYQAFSFDLVASDFGTPQLQATATITVTLSDENDNAPVFSNATYMF-------SLA 2218
Query: 128 SNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGD-----PP 179
+VS GSVSATDAD + Y L + L I TG+L LT PP
Sbjct: 2219 EDVS----LGVFGSVSATDADTGVNALIEYTLLTSTGLFAIDAATGDLSLTAALDYDVPP 2274
Query: 180 SDDVEYELTVEAHDLQSPS 198
Y LTVEA D +PS
Sbjct: 2275 Q---MYTLTVEASDGGAPS 2290
>gi|402872813|ref|XP_003900295.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-16 [Papio
anubis]
Length = 743
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 57/106 (53%), Gaps = 14/106 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ +T TD+ K E ++TV + D NDN+P F+Q Y F V +
Sbjct: 403 LVTERALDREATAEYNITLTVTDMGTPRLKTEHNITVQISDVNDNAPAFTQTFYTFFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVV 164
NS H IGSVSATD D +V Y L P LV+
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPRVLVL 498
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV ++DREE Q L +TA D ++ T V ++V+D NDN+P F Q +Y+ + +
Sbjct: 194 LVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVHIEVVDINDNAPEFEQPIYKVRIPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP----SNLVVIVPQTGELLL 174
SSL S V+ +VSA D D K++Y L P S ++ + TGE+ L
Sbjct: 254 -NSSLGSLVA---------TVSARDLDSGANGKISYSLFQPSEDISKMLEVNAMTGEIRL 303
Query: 175 TGDPPSDDV-EYELTVEAHD 193
+ V YE+ ++A D
Sbjct: 304 RKQVDFEAVTSYEVHIKATD 323
>gi|397518000|ref|XP_003829188.1| PREDICTED: protocadherin beta-6 [Pan paniscus]
Length = 842
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 70/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ K + +TV V D NDN+P F+Q Y V +
Sbjct: 449 LVTEGALDRESRAEYNITITVTDLGTPRLKTQQSITVQVSDVNDNAPAFTQTSYTLFVRE 508
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H IGSVSATD D +V Y L P N LV I G
Sbjct: 509 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQNPHLPLASLVSINADNGH 558
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 559 LFALRSLDYEALQAFEFRVGATDRGSPA 586
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 63/135 (46%), Gaps = 25/135 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
L RY+I+ NP H + RN +E + LV +DREE Q L + A D
Sbjct: 214 LQRYTIS----------SNPHFHVLTRNRSEGRKFPELVLDKPLDREEQPQLRLTLIALD 263
Query: 86 VKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
++ T + + VLD NDN P F++++Y V + N+ + S + +VSA
Sbjct: 264 GGSPPRSGTSEIQIQVLDINDNVPEFAEELYEAQVPE-----NNPLG-----SLVITVSA 313
Query: 145 TDADG---DKVAYKL 156
D D KV+Y L
Sbjct: 314 RDLDAGSFGKVSYAL 328
>gi|297676219|ref|XP_002816038.1| PREDICTED: protocadherin beta-17-like [Pongo abelii]
Length = 796
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+T G +DRE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 404 LLTEGALDRESRAEYNITITVTDLGTPRLKTEYNITVRVSDVNDNAPAFTQTSYTLFVRE 463
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H IGSVSATD D +V Y L P N LV I G
Sbjct: 464 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQNPHLPLASLVSINADNGH 513
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 514 LFALRSLDYEALQAFEFRVGASDRGSPA 541
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 76/173 (43%), Gaps = 28/173 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
YSI+ + H F RN ++ K LV +DREE Q L +TA D
Sbjct: 171 YSISTNSYFHLFT---------RNHSDGKKYPELVLDQALDREEQPQLRLTLTALDGGSP 221
Query: 90 NKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ T V + ++D NDN P F+Q+ Y V + + S + +VSA D D
Sbjct: 222 PRIGTSQVLIVIVDINDNVPEFAQRRYEVQVPE----------NTPTGSLVITVSARDLD 271
Query: 149 G---DKVAYKLAVPSNLVV----IVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
+++Y SN ++ I TGE+ L ++++ Y + VEA D
Sbjct: 272 AGTHGELSYSFFQYSNQIIQSFEINSITGEIRLKKALDFEEIQSYHMEVEASD 324
>gi|397518016|ref|XP_003829196.1| PREDICTED: protocadherin beta-17-like [Pan paniscus]
Length = 796
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+T G +DRE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 404 LLTEGALDRESRAEYNITITVTDLGTPRLKTEYNITVLVSDVNDNAPAFTQTSYTLFVRE 463
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H IGSVSATD D +V Y L P N LV I G
Sbjct: 464 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQNPHLPLASLVSINTDNGH 513
Query: 172 LLLTGDPPSDDV-EYELTVEAHDLQSPS 198
L + + E+E V A D SP+
Sbjct: 514 LFALRSLDYEALQEFEFRVGATDRGSPA 541
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
YSI+ + H F RN ++ K LV +DREE Q L +TA D
Sbjct: 171 YSISTNSYFHLFT---------RNHSDGKKYPELVLDQALDREEQPQLRLTLTALDGGSP 221
Query: 90 NKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ T V + ++D NDN P F+Q+ Y V + N+ + S + +VSA D D
Sbjct: 222 PRIGTSQVLIVIVDINDNVPEFAQRRYEVQVPE-----NTPIG-----SLVITVSARDLD 271
Query: 149 G---DKVAYKLAVPSNLVV----IVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
+++Y SN ++ I TGE+ L ++++ Y + VEA D
Sbjct: 272 AGTHGELSYSFFQYSNQIIQAFEINSITGEIRLKKALDFEEIQSYHMEVEASD 324
>gi|426367248|ref|XP_004050645.1| PREDICTED: protocadherin-16 [Gorilla gorilla gorilla]
Length = 3298
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 23/154 (14%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+G +D E+ +Y L + A D G ++ ++TV V D NDN+P FSQ +Y+ ++
Sbjct: 2334 TGPLDFEQCDRYQLQLLAHD--GPHEGRANLTVLVEDVNDNAPAFSQSLYQVML------ 2385
Query: 126 LNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELL------LTG 176
+ H S+I SVSATD D ++Y LA P++ + P G L G
Sbjct: 2386 ----LEHTPPGSAILSVSATDRDSGANGHISYHLASPADGFSVDPNNGTLFTIVGTVALG 2441
Query: 177 DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQ 210
S V ++ +EA D +P R AR V LQ
Sbjct: 2442 HDGSGAV--DVVLEARDHGAPGRAARATVHVQLQ 2473
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 86/204 (42%), Gaps = 20/204 (9%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V + P+ + YS+ Q +++ +P T E+
Sbjct: 1116 ENQPPGTSVGR--VFATDRDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEV---------- 1163
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
T +DRE+ + Y L++ D ++ T V V VLD NDNSP F Q G
Sbjct: 1164 --TTLQTLDREQQSSYQLLVQVQDGGSPPRSTTGTVHVAVLDLNDNSPTFLQ-ASGAAGG 1220
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGELLLTGDP- 178
L + V +++ + + + + Y L P S L + P +GE LLT P
Sbjct: 1221 GLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGE-LLTAAPL 1279
Query: 179 -PSDDVEYELTVEAHDLQSPSRYA 201
++ Y LT+ AHD SP R A
Sbjct: 1280 IQAERPHYVLTLSAHDQGSPPRSA 1303
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 25/131 (19%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LVR++++ G+ + F L + SG L + +D E A++ LV+ A
Sbjct: 2633 PHGLVRFTVSSGDPSGLFEL------------DESSGTLRLAHA-LDCETQARHQLVVQA 2679
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G + A VT++V D ND+ P F + L +SL N +++ ++
Sbjct: 2680 ADPAGAHFALAPVTIEVQDVNDHGPAFPLNL-------LSTSLAENQPPGTLVTTLHAI- 2731
Query: 144 ATDADGDKVAY 154
DGD A+
Sbjct: 2732 ----DGDAGAF 2738
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 406 EGGEGH-FAL----------STQDSVIYLVCVARRLDREERDAYNLRVTATDSGSPPLRA 454
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + V D NDN+P F +++YR
Sbjct: 455 EAAFVLHVTDVNDNAPAFDRQLYR 478
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 96/250 (38%), Gaps = 35/250 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIVG 120
L T+ +DRE Y+ ++A D T VT+ V D ND++P F R +
Sbjct: 1911 LRTAAALDRERCPSYTFSVSAVDGAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLP 1970
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA-VPSNLVVIVPQTGELLLTG 176
S ++ ++ ++ A D D + Y+LA P + TGE+ +
Sbjct: 1971 RPGPSFSTPT------LALATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVAR 2024
Query: 177 DP----PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
P P D V L + A DL P+R A V LQ + E+ + SEA
Sbjct: 2025 SPVALGPRDRV---LFIVATDLGRPARSATGVIIVGLQGEA-----ERGPRFPRASSEAT 2076
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGD 292
R T V P + G G I +++ E+ F I+ IT
Sbjct: 2077 IRENAPPGTPIVSPR-----AVHAGGTNGPITYSILSGNEKGTFSIQPSTGAIT------ 2125
Query: 293 VRVKKRWDFE 302
VR + DFE
Sbjct: 2126 VRSAEGLDFE 2135
Score = 40.4 bits (93), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 15/93 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y + G D H F L S +G L V +DRE A++ L + A+D
Sbjct: 1580 VSYRLASGGDGH-FRL------------HSSTGALSVVR-PLDRERRAEHVLTVVASDHG 1625
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIV 119
++ T V TV V D ND +P F Q+ Y ++
Sbjct: 1626 SPPRSATQVLTVSVADVNDEAPTFQQQEYSVLL 1658
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ TF L E R + LV +G++DRE + Y L + A D
Sbjct: 180 YALSGDGAGETFRL------ETRPGPDGTPVPELVVTGELDRENRSHYMLQLEAYDGGSP 233
Query: 90 -NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+A+ + V +LD ND++P F+Q Y +V
Sbjct: 234 PRRAQALLDVTLLDINDHAPAFNQSRYHAVV 264
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 114/287 (39%), Gaps = 51/287 (17%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVIT 82
H V YSI GN F L+ P E S L LV +D E + QY+L +
Sbjct: 2515 HAAVDYSIISGNWGRVFQLE-PRLAEAGESAGPGPRALGCLVLLEPLDFESLTQYNLTVA 2573
Query: 83 ATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
A D + + VTV VLD NDN PVF++ YR V + + + + + H
Sbjct: 2574 AADRGQPPQSSVVPVTVTVLDVNDNPPVFTRASYRVAVPE-DTPVGAELLH--------- 2623
Query: 142 VSATDAD-GDKVAYKLAV----PSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAH 192
V A+DAD G + V PS L + +G L L + D E ++L V+A
Sbjct: 2624 VEASDADPGPHGLVRFTVSSGDPSGLFELDESSGTLRLAH---ALDCETQARHQLVVQAA 2680
Query: 193 DLQSPSRYAREPAQVWLQ------------FNSPVLQDEQ-------LLQMIDRKSEAPH 233
D + +A P + +Q S L + Q L ID + A
Sbjct: 2681 DPAG-AHFALAPVTIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGDAGAFG 2739
Query: 234 RIEKRRVTRAVRPTKRIDFS--ETDGEMEGRIVFALEKETEREKFKI 278
R+ + P R F+ + GE+ R+ F E E F++
Sbjct: 2740 RLRYSLLEAGPGPEGREAFALNSSTGELRARVPFDYEHT---ESFRL 2783
>gi|348511876|ref|XP_003443469.1| PREDICTED: protocadherin Fat 4 [Oreochromis niloticus]
Length = 4971
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 114/262 (43%), Gaps = 55/262 (20%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+RY I +GN+ F + +S SG V LV G +D E + YSL I A D
Sbjct: 1220 LLRYHIAEGNEEGQFTI------------DSSSGQVTLV--GKLDYESTSSYSLKIIAVD 1265
Query: 86 VKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
+ + +++ +LDENDNSP+F KSSL+ +V + + SV+
Sbjct: 1266 AGAVPLSSSCMLSISILDENDNSPIFP-----------KSSLSVDVLENMRIGELVASVT 1314
Query: 144 ATDADGDK---VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
TDAD + + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1315 GTDADSGQNADITYSITATNNHGTFSISPNTGSIFLV---KKLDFETQSFYKLNITAKDN 1371
Query: 195 QSPSRYAREPAQVWLQ-FNS--PVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRID 251
P R + P + ++ FN PV + + I E ++ +V I
Sbjct: 1372 GRPPRSSSIPVVIHVRDFNDNPPVFTPGDIFKSIP---------ENLPISASVM---TIT 1419
Query: 252 FSETDGEMEGRIVFALEKETER 273
+TD ++ G + +++ ++ R
Sbjct: 1420 AQDTDADINGLLQYSIVQQIPR 1441
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 93/196 (47%), Gaps = 31/196 (15%)
Query: 22 KHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVI 81
K + L+ Y+IT GND FAL S++GVL + + +D EE Q+ L +
Sbjct: 3094 KEMNGLITYNITSGNDKGLFALN------------SRTGVLSL-AHPLDFEEKQQHELRV 3140
Query: 82 TATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG 140
+ATD I K VT+ V D NDN PVF Y IV + NV +++
Sbjct: 3141 SATDGGWIAKTSYVSVTIHVTDVNDNPPVFDPDEYFPIVQE-------NVPSG---TTVI 3190
Query: 141 SVSATDADGDK---VAYKL-AVPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDL 194
++ATD D +AY + + S+L VI P TG + G D + V Y LTV+A ++
Sbjct: 3191 KLNATDLDSGANAVMAYVIQSSDSDLFVIDPNTGTITTQGFLDYEAKQV-YHLTVKAFNV 3249
Query: 195 QSPSRYAREPAQVWLQ 210
R + + L+
Sbjct: 3250 PDEERCSFANVNIQLK 3265
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 134/308 (43%), Gaps = 58/308 (18%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y+I +GN ++F++ N T EIR T+ +DRE+VA Y+L + A
Sbjct: 2675 PNGQLEYAIIEGNKENSFSI-NRATGEIR------------TTRPLDREKVALYTLKVKA 2721
Query: 84 TDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
TD +G+ T V ++VLD NDN+P FS K++ V + N+ V + ++
Sbjct: 2722 TD-RGLPPKNTIVKVLINVLDVNDNAPRFS-KIFSATVAE-----NAPVGY-----TVTR 2769
Query: 142 VSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSP 197
V+ TD D A Y + S I P TG++ ++ +D Y + V AHD
Sbjct: 2770 VTTTDEDAGSNAISRYSITDTSLPFNINPNTGDITISRPLNREDTNHYIVKVSAHD---- 2825
Query: 198 SRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDG 257
W + + R S + ++ +T R+ ++ D
Sbjct: 2826 --------SGWTVSTDVTVFITDINDNAPRFSRPSYYLDYPELTEVGSLVTRVSATDPDE 2877
Query: 258 EMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEELGPEKTID-----F 312
+ G+I + + ++E F+I G++ VK++ ++ +I+ F
Sbjct: 2878 DFNGKIFYFIRSQSEY--FRIN--------ASTGEIFVKQQLKYQNSTGASSININRHSF 2927
Query: 313 WVTINNQA 320
VT +++A
Sbjct: 2928 IVTASDRA 2935
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 60/122 (49%), Gaps = 25/122 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V+Y IT G D+ F + NS K L+ +DREE Y L +TA D
Sbjct: 701 VKYFITAG-DSSKFRI---------NSNTGKITTLV----PLDREEKTAYQLQVTAADGS 746
Query: 88 GI-NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
G+ + VTV V+D DN PVFSQKVY F++ + N V + IG+VSAT
Sbjct: 747 GLRSHTPAIVTVTVIDTQDNPPVFSQKVYSFVMFE-----NVGVG-----TVIGTVSATT 796
Query: 147 AD 148
D
Sbjct: 797 VD 798
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
G++DREE++ Y+L + ATD + T VT+ VLD NDN+P FSQ +Y
Sbjct: 2086 GELDREELSNYTLTVVATDKGEPPLSSTMDVTMVVLDVNDNTPSFSQNIY 2135
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + P+ LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1730 GDGFKIMQLTATDADEGPNALVTYTIISGADD-SFRI------------DPESGDLIATK 1776
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G ++ + + V D ND++P FS+ Y F
Sbjct: 1777 -KLDRERRSKYSLLVRADD--GKQSSDMTLNITVKDVNDHTPKFSRATYSF 1824
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 18/116 (15%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN +GT V + + + + + + +R+SI+ GN N F + +S +GV
Sbjct: 2141 ENILTGTDV--IQVFASDADEGTNGQIRFSISGGNTNSDFRI------------DSVTGV 2186
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDV--LDENDNSPVFSQKVY 115
+ V +DRE + YSLV+ A D +G + TV++ LD ND SPVF Y
Sbjct: 2187 ISVAK-QLDREARSSYSLVVQAAD-RGSSPRVDRATVNIVLLDVNDCSPVFELSPY 2240
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 15/89 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y ++ GND F L S SG L +T +DRE +Y L+ITATD
Sbjct: 2271 LSYMLSGGNDEGAFTL-------------SSSGQLSLTE-TLDREVQEKYILLITATDSG 2316
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVY 115
+ + T VTV V D NDN PVF+ ++
Sbjct: 2317 TPSLSGTGTVTVMVDDVNDNVPVFTSSIF 2345
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 81/190 (42%), Gaps = 31/190 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVL-LVTSGDIDREEVAQYSLVITATDVKG 88
Y I +GN+ F L +I + + L LV++G +DRE Y L+I D KG
Sbjct: 159 YRIVKGNEQRKFRL------DITVNPSGEGAFLHLVSTGGLDREVTPFYQLLIEVED-KG 211
Query: 89 INK--AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
K V V + D NDN P+F Q Y+ S SSI ++A+D
Sbjct: 212 EPKKFGYMQVNVTIQDINDNPPIFEQDQYQ----------TSVFEDAAVGSSILEITASD 261
Query: 147 AD---GDKVAYKL--AVPSNLVVIVPQTGELLL--TGDPPSDDVEYELTVEAHDLQSPSR 199
D ++ Y L P I P+ G +++ + D S EY LT+ A D PS
Sbjct: 262 QDEGANAEIRYFLDEGTPFQ---IDPKAGTIIIKESLDYESKK-EYSLTIHAVDNGVPSL 317
Query: 200 YAREPAQVWL 209
R A + L
Sbjct: 318 SGRTEATIKL 327
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 23/118 (19%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
ME++ +GT V +LV SS S+T G+ + NP T +I
Sbjct: 2350 MEDAPTGTDV----LLVNSSDADVGVNGVISLTGGHGQFSI---NPATGQI--------- 2393
Query: 61 VLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKVY 115
+TS +DRE+ A Y L++ ATD +G++ + T V+V V D NDN P F Y
Sbjct: 2394 ---ITSSLLDREDRANYQLLVVATDGGQPEGLSSSAT-VSVTVADINDNPPRFHHHPY 2447
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 21/143 (14%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
IL + S + V Y + + +++ TF L NP T G VT +D E
Sbjct: 1839 ILASDSDSGVNGEVTYLLEEDDEDETFLL-NPVT-----------GFFNVTR-PLDYETQ 1885
Query: 75 AQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWK 134
Y L A D G + V +VLD NDN+P+F+ Y +S++ ++
Sbjct: 1886 QYYILTAKAQDGGG-QASTVRVYFNVLDVNDNAPIFNTTTY-------STSVSESLPPGS 1937
Query: 135 KFSSIGSVSATDADGDKVAYKLA 157
++G+ A D ++ YK+A
Sbjct: 1938 SIITVGATDADDGQNAQLLYKIA 1960
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 22/174 (12%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD---VKGIN 90
QG D + L + + ++G + VT G +DRE+ + SL + A + ++G +
Sbjct: 3303 QGEDGVVYYLIFGRSRKKGFGINKRTGQIYVT-GTLDREKEEKVSLKVLAKNAGSIRGAD 3361
Query: 91 KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG- 149
E V + +LD ND PVF+ ++Y D++ S + F VSA D+D
Sbjct: 3362 IDEVFVNITILDAND-PPVFTNELY-----DVQVSEGLSPGGLVTF-----VSAEDSDSV 3410
Query: 150 ---DKVAYKLAVPS--NLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSP 197
+ +Y +A S N+ I +TG++ + + + + Y LTV A D +P
Sbjct: 3411 PSWSRFSYSIAPESDKNIFTINAKTGQVSVAAELDRETIPVYNLTVLAVDTGTP 3464
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 51/133 (38%), Gaps = 16/133 (12%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
IDREE Y L + A G E V + V D NDN+P F V S
Sbjct: 830 IDREEQGFYQLKVVAR--AGEITGEAFVNITVKDLNDNAPHFIHTVEHV----------S 877
Query: 129 NVSHWKKFSSIGSVSATDAD---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVE 184
V +W I A+D D V Y L P L I + G + LTG
Sbjct: 878 AVENWSTGHVIFQAKASDPDEGANGMVVYSLKQNPKGLFHIHEKHGLITLTGPLEITTSS 937
Query: 185 YELTVEAHDLQSP 197
YE+ V A D+ P
Sbjct: 938 YEIEVSASDMGVP 950
>gi|61162128|dbj|BAD91053.1| Fc2-cadherin [Folsomia candida]
Length = 1651
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 83/181 (45%), Gaps = 38/181 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY IT+GN FA+KN T G + V +G +D E +Y L + A+D
Sbjct: 5 IRYEITKGNTGGAFAVKNMT------------GAIYV-AGPLDYETRKRYDLTLVASD-- 49
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+N+ ET V + ++D+ND PVFSQ VY + ++ SN+ + V ATD
Sbjct: 50 SLNENETTVVMRIIDKNDLPPVFSQSVY---MAEILEEFTSNLP-----LKLTQVIATDG 101
Query: 148 DGDK---VAYKLA--------VPSNLVVIVPQTGELL----LTGDPPSDDVEYELTVEAH 192
D D+ + Y L +N I TGE+ L D P+ ++ TV A
Sbjct: 102 DRDRPQNIVYFLTGQGIDSENAANNKFDINRTTGEIYVLKPLDRDSPNGRAQWRFTVFAQ 161
Query: 193 D 193
D
Sbjct: 162 D 162
>gi|73490260|dbj|BAB61903.2| KIAA1773 protein [Homo sapiens]
Length = 3434
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 23/154 (14%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+G +D E+ +Y L + A D G ++ ++TV V D NDN+P FSQ +Y+ ++
Sbjct: 2470 TGPLDFEQCDRYQLQLLAHD--GPHEGRANLTVLVEDVNDNAPAFSQSLYQVML------ 2521
Query: 126 LNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELL------LTG 176
+ H S+I SVSATD D ++Y LA P++ + P G L G
Sbjct: 2522 ----LEHTPPGSAILSVSATDRDSGANGHISYHLASPADGFSVDPNNGTLFTIVGTVALG 2577
Query: 177 DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQ 210
S V ++ +EA D +P R AR V LQ
Sbjct: 2578 HDGSGAV--DVVLEARDHGAPGRAARATVHVQLQ 2609
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 86/204 (42%), Gaps = 20/204 (9%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V + P+ + YS+ Q +++ +P T E+
Sbjct: 1252 ENQPPGTSVGR--VFATDRDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEV---------- 1299
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
T +DRE+ + Y L++ D ++ T V V VLD NDNSP F Q G
Sbjct: 1300 --TTLQTLDREQQSSYQLLVQVQDGGSPPRSTTGTVHVAVLDLNDNSPTFLQ-ASGAAGG 1356
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGELLLTGDP- 178
L + V +++ + + + + Y L P S L + P +GE LLT P
Sbjct: 1357 GLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGE-LLTAAPL 1415
Query: 179 -PSDDVEYELTVEAHDLQSPSRYA 201
++ Y LT+ AHD SP R A
Sbjct: 1416 IRAERPHYVLTLSAHDQGSPPRSA 1439
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 13/87 (14%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LVR++++ G+ + F L + SG L + +D E A++ LV+ A
Sbjct: 2769 PHGLVRFTVSSGDPSGLFEL------------DESSGTLRLAHA-LDCETQARHQLVVQA 2815
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVF 110
D G + A VT++V D ND+ P F
Sbjct: 2816 ADPAGAHFALAPVTIEVQDVNDHGPAF 2842
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 97/250 (38%), Gaps = 35/250 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIVG 120
L T+ +DRE+ Y+ ++A D T VT+ V D ND++P F R +
Sbjct: 2047 LRTAAALDREQCPSYTFSVSAVDGAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLP 2106
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA-VPSNLVVIVPQTGELLLTG 176
S ++ ++ ++ A D D + Y+LA P + TGE+ +
Sbjct: 2107 RPGPSFSTPT------LALATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVAR 2160
Query: 177 DP----PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
P P D V L + A DL P+R A V LQ + E+ + SEA
Sbjct: 2161 SPVALGPRDRV---LFIVATDLGRPARSATGVIIVGLQGEA-----ERGPRFPRASSEAT 2212
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGD 292
R T V P + G G I +++ E+ F I+ IT
Sbjct: 2213 IRENAPPGTPIVSPR-----AVHAGGTNGPITYSILSGNEKGTFSIQPSTGAIT------ 2261
Query: 293 VRVKKRWDFE 302
VR + DFE
Sbjct: 2262 VRSAEGLDFE 2271
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 542 EGGEGH-FAL----------STQDSVIYLVCVARRLDREERDAYNLRVTATDSGSPPLRA 590
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + V D NDN+P F +++YR
Sbjct: 591 EAAFVLHVTDVNDNAPAFDRQLYR 614
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y + G D H F L S +G L V +DRE+ A++ L + A+D
Sbjct: 1716 VSYRLASGGDGH-FRL------------HSSTGALSVVR-PLDREQRAEHVLTVVASDHG 1761
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIV 119
++ T V TV V D ND +P F Q+ Y ++
Sbjct: 1762 SPPRSATQVLTVSVADVNDEAPTFQQQEYSVLL 1794
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ TF L E R + LV +G++DRE + Y L + A D
Sbjct: 316 YALSGDGAGETFRL------ETRPGPDGTPVPELVVTGELDRENRSHYMLQLEAYDGGSP 369
Query: 90 -NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+A+ + V +LD ND++P F+Q Y +V
Sbjct: 370 PRRAQALLDVTLLDINDHAPAFNQSRYHAVV 400
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVIT 82
H V YSI GN F L+ P E S L LV +D E + QY+L +
Sbjct: 2651 HAAVDYSIISGNWGRVFQLE-PRLAEAGESAGPGPRALGCLVLLEPLDFESLTQYNLTVA 2709
Query: 83 ATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
A D + + VTV VLD NDN PVF++ YR V
Sbjct: 2710 AADRGQPPQSSVVPVTVTVLDVNDNPPVFTRASYRVTV 2747
>gi|397496709|ref|XP_003819172.1| PREDICTED: protocadherin-16 [Pan paniscus]
Length = 3300
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 23/154 (14%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+G +D E+ +Y L + A D G ++ ++TV V D NDN+P FSQ +Y+ ++
Sbjct: 2336 TGPLDFEQCDRYQLQLLAHD--GPHEGRANLTVLVEDVNDNAPAFSQSLYQVML------ 2387
Query: 126 LNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELL------LTG 176
+ H S+I SVSATD D ++Y LA P++ + P G L G
Sbjct: 2388 ----LEHTPPGSAILSVSATDRDSGANGHISYHLASPADGFSVDPNNGTLFTIVGTVALG 2443
Query: 177 DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQ 210
S V ++ +EA D +P R AR V LQ
Sbjct: 2444 HDGSGAV--DVVLEARDHGAPGRAARATVHVQLQ 2475
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 86/204 (42%), Gaps = 20/204 (9%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V + P+ + YS+ Q +++ +P T E+
Sbjct: 1236 ENQPPGTSVGR--VFATDRDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEV---------- 1283
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
T +DRE+ + Y L++ D ++ T V V VLD NDNSP F Q G
Sbjct: 1284 --TTLQTLDREQQSSYQLLVQVQDGGSPPRSTTGTVHVAVLDLNDNSPTFLQ-ASGAAGG 1340
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGELLLTGDP- 178
L + V +++ + + + + Y L P S L + P +GE LLT P
Sbjct: 1341 GLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGE-LLTAAPL 1399
Query: 179 -PSDDVEYELTVEAHDLQSPSRYA 201
++ Y LT+ AHD SP R A
Sbjct: 1400 IRAERPHYVLTLSAHDQGSPPRSA 1423
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 25/131 (19%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LVR++++ G+ + F L + SG L + +D E A++ LV+ A
Sbjct: 2635 PHGLVRFTVSSGDPSGLFEL------------DESSGTLRLAHA-LDCETQARHQLVVQA 2681
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G + A VT++V D ND+ P F + L +SL N +++ ++
Sbjct: 2682 ADPAGAHFALAPVTIEVQDVNDHGPAFPLNL-------LSTSLAENQPPGTLVTTLHAI- 2733
Query: 144 ATDADGDKVAY 154
DGD A+
Sbjct: 2734 ----DGDAGAF 2740
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 97/250 (38%), Gaps = 35/250 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIVG 120
L T+ +DRE+ Y+ ++A D T VT+ V D ND++P F R +
Sbjct: 1913 LRTAAALDREQCPSYTFSVSAVDGAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLP 1972
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA-VPSNLVVIVPQTGELLLTG 176
S ++ ++ ++ A D D + Y+LA P + TGE+ +
Sbjct: 1973 RPGPSFSTPT------LALATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVAR 2026
Query: 177 DP----PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
P P D V L + A DL P+R A V LQ + E+ + SEA
Sbjct: 2027 SPVALGPRDRV---LFIVATDLGRPARSATGVIIVGLQGEA-----ERGPRFPRASSEAT 2078
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGD 292
R T V P + G G I +++ E+ F I+ IT
Sbjct: 2079 IRENAPPGTPIVSPR-----AVHAGGTNGPITYSILSGNEKGTFSIQPSTGAIT------ 2127
Query: 293 VRVKKRWDFE 302
VR + DFE
Sbjct: 2128 VRSAEGLDFE 2137
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 526 EGGEGH-FAL----------STQDSVIYLVCVARRLDREERDAYNLRVTATDSGSPPLRA 574
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + V D NDN+P F +++YR
Sbjct: 575 EAAFVLHVTDVNDNAPAFDRQLYR 598
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 89/220 (40%), Gaps = 49/220 (22%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y + G D H F L S +G L V +DRE+ A++ L + A+D
Sbjct: 1582 VSYRLASGGDGH-FRL------------HSSTGALSVVR-PLDREQRAEHVLTVVASDHG 1627
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
++ T V TV V D ND +P F Q+ Y ++ + NS +S+ ++ ATD
Sbjct: 1628 SPPRSATQVLTVSVADVNDEAPTFQQQEYSVLLRE-----NS-----PPGTSLLTLRATD 1677
Query: 147 AD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYE---LTVEAHDLQSPSR- 199
D +V Y V S + P TG +LT D E E LTV A D SP R
Sbjct: 1678 PDVGANGQVTYG-GVSSESFSLDPDTG--VLTTLRALDREEQEEIILTVYAQDRGSPPRL 1734
Query: 200 --------------YAREPAQVWLQFNSPVLQDEQLLQMI 225
+A L P QD Q L M+
Sbjct: 1735 THVTIRVAVEDENDHAPTFGSAHLSLEVPEGQDPQTLTML 1774
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ TF L E R + LV +G++DRE + Y L + A D
Sbjct: 300 YALSGDGAGETFRL------ETRPGPDGTPVPELVVTGELDRENRSHYMLQLEAYDGGSP 353
Query: 90 -NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+A+ + V +LD ND++P F+Q Y +V
Sbjct: 354 PRRAQALLDVTLLDINDHAPAFNQSRYHAVV 384
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 114/287 (39%), Gaps = 51/287 (17%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVIT 82
H V YSI GN F L+ P E S L LV +D E + QY+L +
Sbjct: 2517 HAAVDYSIISGNWGRVFQLE-PRLAEAGESAGPGPRALGCLVLLEPLDFESLTQYNLTVA 2575
Query: 83 ATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
A D + + VTV VLD NDN PVF++ YR V + + + + + H
Sbjct: 2576 AADRGQPPQSSVVPVTVTVLDVNDNPPVFTRASYRVAVPE-DTPVGAELLH--------- 2625
Query: 142 VSATDAD-GDKVAYKLAV----PSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAH 192
V A+DAD G + V PS L + +G L L + D E ++L V+A
Sbjct: 2626 VEASDADPGPHGLVRFTVSSGDPSGLFELDESSGTLRLAH---ALDCETQARHQLVVQAA 2682
Query: 193 DLQSPSRYAREPAQVWLQ------------FNSPVLQDEQ-------LLQMIDRKSEAPH 233
D + +A P + +Q S L + Q L ID + A
Sbjct: 2683 DPAG-AHFALAPVTIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGDAGAFG 2741
Query: 234 RIEKRRVTRAVRPTKRIDFS--ETDGEMEGRIVFALEKETEREKFKI 278
R+ + P R F+ + GE+ R+ F E E F++
Sbjct: 2742 RLRYSLLEAGPGPEGREAFALNSSTGELRARVPFDYEHT---ESFRL 2785
>gi|410334089|gb|JAA35991.1| dachsous 1 [Pan troglodytes]
Length = 3298
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 23/154 (14%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+G +D E+ +Y L + A D G ++ ++TV V D NDN+P FSQ +Y+ ++
Sbjct: 2334 TGPLDFEQCDRYQLQLLAHD--GPHEGRANLTVLVEDVNDNAPAFSQSLYQVML------ 2385
Query: 126 LNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELL------LTG 176
+ H S+I SVSATD D ++Y LA P++ + P G L G
Sbjct: 2386 ----LEHTPPGSAILSVSATDRDSGANGHISYHLASPADGFSVDPNNGTLFTIVGTVALG 2441
Query: 177 DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQ 210
S V ++ +EA D +P R AR V LQ
Sbjct: 2442 HDGSGAV--DVVLEARDHGAPGRAARATVHVQLQ 2473
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 86/204 (42%), Gaps = 20/204 (9%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V + P+ + YS+ Q +++ +P T E+
Sbjct: 1116 ENQPPGTSVGR--VFATDRDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEV---------- 1163
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
T +DRE+ + Y L++ D ++ T V V VLD NDNSP F Q G
Sbjct: 1164 --TTLQTLDREQQSSYQLLVQVQDGGSPPRSTTGTVHVAVLDLNDNSPTFLQ-ASGAAGG 1220
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGELLLTGDP- 178
L + V +++ + + + + Y L P S L + P +GE LLT P
Sbjct: 1221 GLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGE-LLTAAPL 1279
Query: 179 -PSDDVEYELTVEAHDLQSPSRYA 201
++ Y LT+ AHD SP R A
Sbjct: 1280 IRAERPHYVLTLSAHDQGSPPRSA 1303
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 25/131 (19%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LVR++++ G+ + F L + SG L + +D E A++ LV+ A
Sbjct: 2633 PHGLVRFTVSSGDPSGLFEL------------DESSGTLRLAHA-LDCETQARHQLVVQA 2679
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G + A VT++V D ND+ P F + L +SL N +++ ++
Sbjct: 2680 ADPAGAHFALAPVTIEVQDVNDHGPAFPLNL-------LSTSLAENQPPGTLVTTLHAI- 2731
Query: 144 ATDADGDKVAY 154
DGD A+
Sbjct: 2732 ----DGDAGAF 2738
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 89/220 (40%), Gaps = 49/220 (22%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y + G D H F L S +G L V +DRE+ A++ L + A+D
Sbjct: 1580 VSYRLASGGDGH-FRL------------HSSTGALSVVR-PLDREQRAEHVLTVVASDHG 1625
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
++ T V TV V D ND +P F Q+ Y ++ + NS +S+ ++ ATD
Sbjct: 1626 SPPRSATQVLTVSVADVNDEAPTFQQQEYSVLLRE-----NS-----PPGTSLLTLRATD 1675
Query: 147 AD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYE---LTVEAHDLQSPSR- 199
D +V Y V S + P TG +LT D E E LTV A D SP R
Sbjct: 1676 PDVGANGQVTYG-GVSSESFSLDPDTG--VLTTLRALDREEQEEIILTVYAQDRGSPPRL 1732
Query: 200 --------------YAREPAQVWLQFNSPVLQDEQLLQMI 225
+A L P QD Q L M+
Sbjct: 1733 THVTVRVAVEDENDHAPTFGSAHLSLEVPEGQDPQTLTML 1772
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 406 EGGEGH-FAL----------STQDSVIYLVCVARRLDREERDAYNLRVTATDSGSPPLRA 454
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + + D NDN+P F +++YR
Sbjct: 455 EAAFVLHITDVNDNAPAFDRQLYR 478
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 96/249 (38%), Gaps = 31/249 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIVG 120
L T+ +DRE+ Y+ ++A D T VT+ V D ND++P F R +
Sbjct: 1911 LRTAAALDREQCPSYTFSVSAVDGAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLP 1970
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA-VPSNLVVIVPQTGELLLTG 176
S ++ ++ ++ A D D + Y+LA P + TGE+ +
Sbjct: 1971 RPGPSFSTPT------LALATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVAR 2024
Query: 177 DP----PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
P P D V L + A DL P+R A V LQ + E+ + SEA
Sbjct: 2025 SPVALGPRDRV---LFIVATDLGRPARSATGVIIVGLQGEA-----ERGPRFPRASSEAT 2076
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVD--EN 290
R T V P + G G I +++ E+ F I+ ITV E
Sbjct: 2077 IRENAPPGTPIVSPR-----AVHAGGTNGPITYSILSGNEKGTFSIQPSTGAITVHSAEG 2131
Query: 291 GDVRVKKRW 299
D V R
Sbjct: 2132 LDFEVSPRL 2140
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ TF L E R + LV +G++DRE + Y L + A D
Sbjct: 180 YALSGDGAGETFRL------ETRPGPDGTPVPELVVTGELDRENRSHYMLQLEAYDGGSP 233
Query: 90 -NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+A+ + V +LD ND++P F+Q Y +V
Sbjct: 234 PRRAQALLDVTLLDINDHAPAFNQSRYHAVV 264
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 114/287 (39%), Gaps = 51/287 (17%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVIT 82
H V YSI GN F L+ P E S L LV +D E + QY+L +
Sbjct: 2515 HAAVDYSIISGNWGRVFQLE-PRLAEAGESAGPGPRALGCLVLLEPLDFESLTQYNLTVA 2573
Query: 83 ATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
A D + + VTV VLD NDN PVF++ YR V + + + + + H
Sbjct: 2574 AADRGQPPQSSVVPVTVTVLDVNDNPPVFTRASYRVAVPE-DTPVGAELLH--------- 2623
Query: 142 VSATDAD-GDKVAYKLAV----PSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAH 192
V A+DAD G + V PS L + +G L L + D E ++L V+A
Sbjct: 2624 VEASDADPGPHGLVRFTVSSGDPSGLFELDESSGTLRLAH---ALDCETQARHQLVVQAA 2680
Query: 193 DLQSPSRYAREPAQVWLQ------------FNSPVLQDEQ-------LLQMIDRKSEAPH 233
D + +A P + +Q S L + Q L ID + A
Sbjct: 2681 DPAG-AHFALAPVTIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGDAGAFG 2739
Query: 234 RIEKRRVTRAVRPTKRIDFS--ETDGEMEGRIVFALEKETEREKFKI 278
R+ + P R F+ + GE+ R+ F E E F++
Sbjct: 2740 RLRYSLLEAGPGPEGREAFALNSSTGELRARVPFDYEHT---ESFRL 2783
>gi|109079059|ref|XP_001092245.1| PREDICTED: protocadherin beta-15 isoform 2 [Macaca mulatta]
Length = 787
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 70/147 (47%), Gaps = 22/147 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE AQY++ IT TD+ K E +TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTEGALDRENRAQYNITITITDLGTPRLKTEHCITVLVSDVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINTDNGH 512
Query: 172 LLLTGDPPSDDV-EYELTVEAHDLQSP 197
L + + E+E V A D SP
Sbjct: 513 LFALRSLDYETLQEFEFRVGATDRGSP 539
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV ++DREE A+ L +TA D ++ T + + VLD NDN+P F+Q +Y +
Sbjct: 194 LVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDVNDNAPEFAQALY-----E 248
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
++ S NS + S + VSA D D
Sbjct: 249 VQVSENSPIG-----SLVVKVSARDLD 270
>gi|16933557|ref|NP_003728.1| protocadherin-16 precursor [Homo sapiens]
gi|20139065|sp|Q96JQ0.1|PCD16_HUMAN RecName: Full=Protocadherin-16; AltName: Full=Cadherin-19; AltName:
Full=Cadherin-25; AltName: Full=Fibroblast cadherin-1;
AltName: Full=Protein dachsous homolog 1; Flags:
Precursor
gi|119589089|gb|EAW68683.1| dachsous 1 (Drosophila) [Homo sapiens]
gi|168275540|dbj|BAG10490.1| protocadherin-16 precursor [synthetic construct]
Length = 3298
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 23/154 (14%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+G +D E+ +Y L + A D G ++ ++TV V D NDN+P FSQ +Y+ ++
Sbjct: 2334 TGPLDFEQCDRYQLQLLAHD--GPHEGRANLTVLVEDVNDNAPAFSQSLYQVML------ 2385
Query: 126 LNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELL------LTG 176
+ H S+I SVSATD D ++Y LA P++ + P G L G
Sbjct: 2386 ----LEHTPPGSAILSVSATDRDSGANGHISYHLASPADGFSVDPNNGTLFTIVGTVALG 2441
Query: 177 DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQ 210
S V ++ +EA D +P R AR V LQ
Sbjct: 2442 HDGSGAV--DVVLEARDHGAPGRAARATVHVQLQ 2473
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 86/204 (42%), Gaps = 20/204 (9%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V + P+ + YS+ Q +++ +P T E+
Sbjct: 1116 ENQPPGTSVGR--VFATDRDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEV---------- 1163
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
T +DRE+ + Y L++ D ++ T V V VLD NDNSP F Q G
Sbjct: 1164 --TTLQTLDREQQSSYQLLVQVQDGGSPPRSTTGTVHVAVLDLNDNSPTFLQ-ASGAAGG 1220
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGELLLTGDP- 178
L + V +++ + + + + Y L P S L + P +GE LLT P
Sbjct: 1221 GLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGE-LLTAAPL 1279
Query: 179 -PSDDVEYELTVEAHDLQSPSRYA 201
++ Y LT+ AHD SP R A
Sbjct: 1280 IRAERPHYVLTLSAHDQGSPPRSA 1303
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 13/87 (14%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LVR++++ G+ + F L + SG L + +D E A++ LV+ A
Sbjct: 2633 PHGLVRFTVSSGDPSGLFEL------------DESSGTLRLAHA-LDCETQARHQLVVQA 2679
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVF 110
D G + A VT++V D ND+ P F
Sbjct: 2680 ADPAGAHFALAPVTIEVQDVNDHGPAF 2706
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 97/250 (38%), Gaps = 35/250 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIVG 120
L T+ +DRE+ Y+ ++A D T VT+ V D ND++P F R +
Sbjct: 1911 LRTAAALDREQCPSYTFSVSAVDGAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLP 1970
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA-VPSNLVVIVPQTGELLLTG 176
S ++ ++ ++ A D D + Y+LA P + TGE+ +
Sbjct: 1971 RPGPSFSTPT------LALATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVAR 2024
Query: 177 DP----PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
P P D V L + A DL P+R A V LQ + E+ + SEA
Sbjct: 2025 SPVALGPRDRV---LFIVATDLGRPARSATGVIIVGLQGEA-----ERGPRFPRASSEAT 2076
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGD 292
R T V P + G G I +++ E+ F I+ IT
Sbjct: 2077 IRENAPPGTPIVSPR-----AVHAGGTNGPITYSILSGNEKGTFSIQPSTGAIT------ 2125
Query: 293 VRVKKRWDFE 302
VR + DFE
Sbjct: 2126 VRSAEGLDFE 2135
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 406 EGGEGH-FAL----------STQDSVIYLVCVARRLDREERDAYNLRVTATDSGSPPLRA 454
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + V D NDN+P F +++YR
Sbjct: 455 EAAFVLHVTDVNDNAPAFDRQLYR 478
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y + G D H F L S +G L V +DRE+ A++ L + A+D
Sbjct: 1580 VSYRLASGGDGH-FRL------------HSSTGALSVVR-PLDREQRAEHVLTVVASDHG 1625
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIV 119
++ T V TV V D ND +P F Q+ Y ++
Sbjct: 1626 SPPRSATQVLTVSVADVNDEAPTFQQQEYSVLL 1658
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ TF L E R + LV +G++DRE + Y L + A D
Sbjct: 180 YALSGDGAGETFRL------ETRPGPDGTPVPELVVTGELDRENRSHYMLQLEAYDGGSP 233
Query: 90 -NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+A+ + V +LD ND++P F+Q Y +V
Sbjct: 234 PRRAQALLDVTLLDINDHAPAFNQSRYHAVV 264
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVIT 82
H V YSI GN F L+ P E S L LV +D E + QY+L +
Sbjct: 2515 HAAVDYSIISGNWGRVFQLE-PRLAEAGESAGPGPRALGCLVLLEPLDFESLTQYNLTVA 2573
Query: 83 ATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
A D + + VTV VLD NDN PVF++ YR V
Sbjct: 2574 AADRGQPPQSSVVPVTVTVLDVNDNPPVFTRASYRVTV 2611
>gi|332211631|ref|XP_003254918.1| PREDICTED: protocadherin-16 [Nomascus leucogenys]
Length = 3297
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 23/154 (14%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+G +D E+ +Y L + A D G ++ ++TV V D NDN+P FSQ +Y+ ++
Sbjct: 2333 TGPLDFEQCDRYQLQLLAHD--GPHEGRANLTVLVEDVNDNAPAFSQSLYQVML------ 2384
Query: 126 LNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELL------LTG 176
+ H S+I SVSATD D ++Y LA P++ + P G L G
Sbjct: 2385 ----LEHTPPGSAILSVSATDRDSGANGHISYHLASPASGFSVDPNNGTLFTIVGTVALG 2440
Query: 177 DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQ 210
S V ++ +EA D +P R AR V LQ
Sbjct: 2441 HDGSGAV--DVVLEARDHGAPGRAARATVHVQLQ 2472
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 86/204 (42%), Gaps = 20/204 (9%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V + P+ + YS+ Q +++ +P T E+
Sbjct: 1115 ENQPPGTSVGR--VFATDRDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEV---------- 1162
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
T +DRE+ + Y L++ D ++ T V V VLD NDNSP F Q G
Sbjct: 1163 --TTLQTLDREQQSSYQLLVQVQDGGSPPRSTTGTVHVAVLDLNDNSPTFLQ-ASGAAGG 1219
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGELLLTGDP- 178
L + V +++ + + + + Y L P S L + P +GE LLT P
Sbjct: 1220 GLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGE-LLTAAPL 1278
Query: 179 -PSDDVEYELTVEAHDLQSPSRYA 201
++ Y LT+ AHD SP R A
Sbjct: 1279 IRAERPHYVLTLSAHDQGSPPRSA 1302
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 25/131 (19%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LVR++++ G+ + F L + SG L + +D E A++ LV+ A
Sbjct: 2632 PHGLVRFTVSSGDPSGLFEL------------DESSGTLRLAHA-LDCETQARHQLVVQA 2678
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G + A VT++V D ND+ P F + L +SL N +++ ++
Sbjct: 2679 ADPAGAHFALAPVTIEVQDVNDHGPAFPLNL-------LSTSLAENQPPGTLVTTLHAI- 2730
Query: 144 ATDADGDKVAY 154
DGD A+
Sbjct: 2731 ----DGDAGAF 2737
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 105/270 (38%), Gaps = 47/270 (17%)
Query: 43 LKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDV 100
L P++ E+R +T +DRE+ Y+ ++A D T VT+ V
Sbjct: 1902 LLEPSSGELRTATA------------LDREQCPSYTFSVSAVDGAAAGPLSTTVSVTITV 1949
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA 157
D ND++P F R + S ++ ++ ++ A D D + Y+LA
Sbjct: 1950 RDVNDHAPTFPTSPLRLRLPRPGPSFSTPT------LALATLRAEDRDAGANASILYRLA 2003
Query: 158 -VPSNLVVIVPQTGELLLTGDP----PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFN 212
P + TGE+ + P P D V L V A DL P+R A V LQ
Sbjct: 2004 GTPPPGTTVDSYTGEIRVARSPVALGPRDRV---LFVVATDLGRPARSATGVIIVGLQGE 2060
Query: 213 SPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETE 272
+ E+ + SEA R T V P + I T+G I +++ E
Sbjct: 2061 A-----ERGPRFPRASSEAIIRENAPPGTPIVSP-RAIHAGGTNGP----ITYSILSGNE 2110
Query: 273 REKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ F I+ IT VR + DFE
Sbjct: 2111 KGTFSIQPSTGAIT------VRSAEGLDFE 2134
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 405 EGGEGH-FAL----------STQDSVIYLVCVARRLDREERDAYNLRVTATDSGSPPLRA 453
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + V D NDN+P F +YR
Sbjct: 454 EAAFVLHVTDVNDNAPAFDHHLYR 477
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 10/110 (9%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ TF L E R + LV +G++DRE + Y L + A D
Sbjct: 179 YALSGDGAGETFRL------ETRPGPDGAPVPELVVTGELDRENRSHYMLQLEAYDGGSP 232
Query: 90 -NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS 138
+A+ + V +LD ND++P F+Q Y +V + SL + F+S
Sbjct: 233 PRRAQALLDVTLLDINDHAPAFNQSRYHAVVSE---SLGPGSPVLQVFAS 279
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y + G D H F L S +G L V +DRE+ A++ L + A+D
Sbjct: 1579 VSYWLASGGDGH-FRL------------HSSTGALSVVR-PLDREQRAEHVLTVVASDHG 1624
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIV 119
++ T V TV V D ND +P F Q+ Y ++
Sbjct: 1625 SPPRSATQVLTVSVADVNDEAPTFQQQEYSVLL 1657
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 114/287 (39%), Gaps = 51/287 (17%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVIT 82
H V YSI GN F L+ P E S L LV +D E + QY+L +
Sbjct: 2514 HAAVDYSIISGNWGRVFQLE-PRLAEAGESAGPGPRALGCLVLLEPLDFESLTQYNLTVA 2572
Query: 83 ATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
A D + + VTV VLD NDN PVF++ YR V + + + + + H
Sbjct: 2573 AADRGQPPQSSVVPVTVTVLDVNDNPPVFTRASYRVAVPE-DTPVGAELLH--------- 2622
Query: 142 VSATDAD-GDKVAYKLAV----PSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAH 192
V A+DAD G + V PS L + +G L L + D E ++L V+A
Sbjct: 2623 VEASDADPGPHGLVRFTVSSGDPSGLFELDESSGTLRLAH---ALDCETQARHQLVVQAA 2679
Query: 193 DLQSPSRYAREPAQVWLQ------------FNSPVLQDEQ-------LLQMIDRKSEAPH 233
D + +A P + +Q S L + Q L ID + A
Sbjct: 2680 DPAG-AHFALAPVTIEVQDVNDHGPAFPLNLLSTSLAENQPPGTLVTTLHAIDGDAGAFG 2738
Query: 234 RIEKRRVTRAVRPTKRIDFS--ETDGEMEGRIVFALEKETEREKFKI 278
R+ + P R F+ + GE+ R+ F E E F++
Sbjct: 2739 RLRYSLLEAGPGPEGREAFALNSSTGELRARVPFDYEHT---ESFRL 2782
>gi|449482631|ref|XP_004176432.1| PREDICTED: protocadherin-16 [Taeniopygia guttata]
Length = 2905
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 29/152 (19%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+ G + +G +D E+ ++Y+L + A+D + ++ E ++TV V D NDN P F+Q Y+
Sbjct: 2110 RYGGHIALTGPLDHEQRSRYTLTLRASDTR--HETEANLTVLVEDVNDNVPTFTQVFYQV 2167
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELL 173
++ + H + I +VSATD D GD + + LAVPS V I P G L
Sbjct: 2168 LLPE----------HTPAGTVILTVSATDPDSGSNGD-ITFHLAVPSPDVAIDPSNGTLF 2216
Query: 174 LTGDPPSDDVEY-------ELTVEAHDLQSPS 198
T VE+ +L VEA D SPS
Sbjct: 2217 TT-----RQVEFNASQPTLDLVVEARDHGSPS 2243
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 97/226 (42%), Gaps = 39/226 (17%)
Query: 8 TGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV------ 61
TG L ++ S + V YS+ GN + F L NP+T E E +G+
Sbjct: 1338 TGFVALHVVAQDSDLGENGRVSYSLRAGNADGRFHL-NPSTGEGWEGAEVVAGIPGTRRL 1396
Query: 62 ------------LLVTSGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNS 107
L G ++REEVAQ++L + ATD G + A ++V VLD ND +
Sbjct: 1397 RRVQGYVRTLRGALSIVGALNREEVAQHNLTVVATD-HGFPRLSATQLLSVLVLDVNDEA 1455
Query: 108 PVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVV 164
PVF + Y V + + S + V ATD D +V+Y +
Sbjct: 1456 PVFEKPEYEAHV----------MENLPAGSPVLQVLATDRDLGANGQVSYG-GLSGGPFS 1504
Query: 165 IVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL 209
I PQTG ++ T ++ E + LTV A D P + A VW+
Sbjct: 1505 IHPQTGLIVTTRALDREEQEQHVLTVYARDAGLPPSLTK--ATVWV 1548
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 50/103 (48%), Gaps = 17/103 (16%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQ 112
S + SGVL T+ +DRE++A YSL++ D ++ T VTV VLD NDN+P F+Q
Sbjct: 1608 SLDPVSGVL-STAHALDREQIASYSLIVVVQDHGSPPRSATMSVTVQVLDLNDNAPSFAQ 1666
Query: 113 KVY---------------RFIVGDLKSSLNSNVSHWKKFSSIG 140
Y + + D N VS++ S+G
Sbjct: 1667 ASYTVEVPEDLPVGALVLQLVAEDPDEGTNGQVSYYLGNESLG 1709
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 6/94 (6%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I GN + F ++ + R + ++ LV +D E + Y+L + A+D +G+
Sbjct: 2302 YTIVSGNGGNAFQVE---SRVARAGGQLRTQGALVLVESLDFEAIPVYNLTVAASD-RGL 2357
Query: 90 NK--AETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+ A V + V D NDN PVFS+ YR +V +
Sbjct: 2358 PQRSATVPVLITVQDVNDNPPVFSRAEYRAVVSE 2391
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 16/108 (14%)
Query: 6 SGTGVKGLPILVASSH---KHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL 62
S + G +L ++H P V Y+I+ G+ + F L ES +
Sbjct: 2390 SEAALPGTELLRVAAHDADSGPRGRVHYTISSGDQHGLFQLH-----------ESTGALS 2438
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVF 110
LV +DRE A ++LV+ ATD G + A V ++V D NDN P F
Sbjct: 2439 LVRP--LDREAQALHTLVVQATDTPGGHFALVPVAIEVKDINDNKPYF 2484
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 16/94 (17%)
Query: 60 GVL---LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDV--LDENDNSPVFSQKV 114
GVL LV S +DRE + YSL++ A D G T +T+DV D NDN+P F+Q
Sbjct: 21 GVLYLDLVVSNVLDRENRSSYSLLLEAYD-GGSPPRSTQMTLDVSIQDINDNAPSFNQSR 79
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
Y ++ + + K SSI V A+DAD
Sbjct: 80 YHTLISE----------NLKPGSSILQVFASDAD 103
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 22/125 (17%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-------THVTVDVLDENDNSPVF 110
+SG L V S +DRE Y L + A+ V G A + V + + DENDNSP
Sbjct: 870 ESGWLYVKSA-LDRETRDLYVLTVLAS-VGGTGAAADARKTGTSTVRISITDENDNSPRL 927
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVP 167
S++ Y F V + + S++G V+A+D D ++ Y+L +I
Sbjct: 928 SEERYFFTVSE----------NQAPGSTVGRVTASDRDAGQNSRLTYRLLQHDPNFLIHT 977
Query: 168 QTGEL 172
QTGE+
Sbjct: 978 QTGEV 982
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYR 116
+DREE Y L +TATD G +AE+ + V+D NDN P+F Q+ Y+
Sbjct: 250 LDREERDSYDLRVTATD-SGTPPLRAESAFVLQVMDVNDNPPLFDQQEYK 298
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 55/131 (41%), Gaps = 28/131 (21%)
Query: 22 KHPHQLVRYSITQGNDNHT--FALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSL 79
+ P+ VRYSI G D H+ F + +P T ++ T+ +D E+ Q L
Sbjct: 321 QGPNGEVRYSILHGRDTHSSWFTI-DPATG------------IITTAAPLDYEKDPQPQL 367
Query: 80 VITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFS 137
+ ATD +G + V V D NDN PVF Y SL N F
Sbjct: 368 TVLATD-RGTPALSSSAVVHVALQDVNDNEPVFKSNFYNV-------SLKENTPVGTCFL 419
Query: 138 SIGSVSATDAD 148
V+ATD+D
Sbjct: 420 ---QVTATDSD 427
>gi|444713187|gb|ELW54095.1| Protocadherin beta-18 [Tupaia chinensis]
Length = 1696
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 94/199 (47%), Gaps = 37/199 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ H +TV V D NDN+P F+Q Y +V +
Sbjct: 865 LVTEGALDRESQAEYNITITVTDLGTPRLTTEHSITVLVSDVNDNAPAFTQASYTLLVRE 924
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IG++SATDAD +V Y L P ++LV I G+
Sbjct: 925 ----NNSPALH------IGTISATDADAGTNAQVTYSLLPPHDPQLALASLVSINADNGQ 974
Query: 172 LLLTGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ--- 220
L S D E +E V A D SP+ ++ +V + N+P VL Q
Sbjct: 975 LFALR---SLDYEALRAFEFGVRAADRGSPALSSQALVRVLVLDANDNAPFVLYPLQNGS 1031
Query: 221 --LLQMIDRKSEAPHRIEK 237
+++ R +EA + + K
Sbjct: 1032 APCTELVPRAAEAGYLVTK 1050
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 62/122 (50%), Gaps = 21/122 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ H +TV V D NDN+P F+Q Y +V +
Sbjct: 1509 LVTEGALDRESQAEYNITITVTDLGTPRLTTEHSITVLVSDVNDNAPAFTQASYTLLVRE 1568
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IG++SATDAD +V Y L P ++LV I G+
Sbjct: 1569 ----NNSPALH------IGTISATDADAGTNAQVTYSLLPPHDPQLALASLVSINADNGQ 1618
Query: 172 LL 173
L
Sbjct: 1619 LF 1620
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 88/194 (45%), Gaps = 38/194 (19%)
Query: 31 SITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN 90
++ DN F LK PT K+ LVT +DRE A+Y++ IT TD+
Sbjct: 382 TVCSIQDNLPFYLK-PTF---------KNFYTLVTERPLDREARAEYNITITVTDLGTPR 431
Query: 91 KAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
H +TV V D NDN+P F+Q Y +V + NS H IG++SATDAD
Sbjct: 432 LTTEHSITVLVSDVNDNAPAFTQASYTLLVRE----NNSPALH------IGTISATDADA 481
Query: 150 D---KVAYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQ 195
+V Y L P ++LV I G+L S D E +E V A D
Sbjct: 482 GTNAQVTYSLLPPHDPQLALASLVSINADNGQLFALR---SLDYEALRAFEFGVRAADRG 538
Query: 196 SPSRYAREPAQVWL 209
SP+ ++ +V +
Sbjct: 539 SPALSSQALVRVLV 552
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 51/99 (51%), Gaps = 13/99 (13%)
Query: 52 RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPV 109
RN +E + LV ++DREE + L + A D GI T V +D+LD NDN+P
Sbjct: 645 RNDSEGRKYPELVLDKELDREEQTELRLALMAVD-GGIPPKTGTTQVLIDILDINDNAPE 703
Query: 110 FSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
FSQ +Y+ + + NS V S + +VSA D D
Sbjct: 704 FSQPLYQVQIPE-----NSPVG-----SIVTTVSARDLD 732
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV D+DREE A+ L +TA D ++ T + V V+D NDN P F+Q +Y V +
Sbjct: 1300 LVLDKDLDREEQAELRLTLTALDGGSPPRSGTIQIRVLVMDVNDNVPEFAQTLYEVQVPE 1359
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL 156
NS V S + VSATD D +++Y L
Sbjct: 1360 -----NSPVG-----SLVLKVSATDLDTGTNGEISYSL 1387
>gi|431899687|gb|ELK07641.1| Protocadherin Fat 4 [Pteropus alecto]
Length = 1782
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 87/185 (47%), Gaps = 40/185 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+RYS+ +GN+ FA+ +S SG V L+ G +D E A YSLVI A D
Sbjct: 1244 LIRYSVMKGNEERQFAI------------DSTSGQVTLI--GKLDYEATAAYSLVIQAVD 1289
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
I+ T + +D+LDENDN+P F KS+L +V + + SV+
Sbjct: 1290 SGAISLNSTCTLNIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVT 1338
Query: 144 ATDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
ATD+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1339 ATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQ 1395
Query: 195 QSPSR 199
P R
Sbjct: 1396 GRPPR 1400
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 59/120 (49%), Gaps = 28/120 (23%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V+YSI+ G+ + R ++SGV+ T +DREE Y L I ATD
Sbjct: 724 VKYSISAGDRS-------------RFQVSAQSGVI-STRMALDREEKTAYQLQIVATDGG 769
Query: 88 GINKA-ETHVTVDVLDENDNSPVFSQKVYRFI----------VGDLKSS---LNSNVSHW 133
+ + + VT+ VLD DN PVFSQ Y F+ VG + +S LNSN+S+
Sbjct: 770 NLQSSNQAIVTITVLDTQDNPPVFSQAAYSFVVFENVALGYHVGSVSASTMDLNSNISYL 829
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 81/189 (42%), Gaps = 28/189 (14%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVL-LVTSGDIDREEVAQYSLVITATDVKG 88
Y I QGN+ F L +I S + L LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIIQGNEAGRFRL------DITLSPSGEGAFLHLVSKGGLDREVTPQYQLLVQVED-KG 226
Query: 89 --INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+ V V V D NDN PVF Y+ V + SS+ V+A D
Sbjct: 227 EPRRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE----------DAAVGSSVLQVAAAD 276
Query: 147 AD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSPSRY 200
AD + Y+L + P+TG L+T P D +Y LTV+A D PS
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTVQALDRGVPSLT 334
Query: 201 AREPAQVWL 209
R A + L
Sbjct: 335 GRAEALIQL 343
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 71/174 (40%), Gaps = 29/174 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ T L T+ IDREE + Y L + A+
Sbjct: 826 ISYLITTGDQKGMFAISRVTGQ-------------LTTASMIDREEQSFYQLKVVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V D NDNSP F Q V S+N V +W+ SI A D
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAV---------ESVNV-VENWQAGHSIFQAKAVDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSP 197
D V Y L P NL I + G + L G Y++ + A D+ P
Sbjct: 921 DEGVNGMVFYSLKQNPKNLFTINEKNGSISLLGPLDVHAGSYQMEILASDMGVP 974
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVF 110
L T +DREE A YSL++ A D+ ++ V V +LD NDNSPVF
Sbjct: 641 LSTVSSLDREEQAFYSLLVLAADLGSPPQSSVARVNVSLLDLNDNSPVF 689
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN++ GT V L + A S + I GN+ F E+++S +
Sbjct: 369 ENAQVGTVVALLTVTDADSPAANGN-ISVQILGGNEQRHF--------EVQSSKVPNLSL 419
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAE--------THVTVDVLDENDNSPVFSQK 113
+ V S +DRE + Y+L ++ +D G A + + V D ND+ PVF+Q+
Sbjct: 420 IKVASA-LDRERIPSYNLTVSVSDNSGAPPAAGVQARSSVASLVIFVNDINDHPPVFAQQ 478
Query: 114 VYRFIVGDLKSSLNSNVS-HWKKFSSIGSVSATDAD 148
VYR N+S S + VSATD D
Sbjct: 479 VYRV-----------NLSEEAPPGSYVSGVSATDGD 503
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 27/123 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI +GN F + G L + S ++DRE +Y L++ A+D +
Sbjct: 1031 IAYSIAEGNTGDAFGIF-------------PDGQLYIKS-ELDRELQDRYVLLVVASD-R 1075
Query: 88 GIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ A +VTV + D NDN P+F+ Y F + K S +G VSA
Sbjct: 1076 AVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEE----------EQKSGSFVGKVSAV 1125
Query: 146 DAD 148
D D
Sbjct: 1126 DKD 1128
>gi|402894358|ref|XP_003910330.1| PREDICTED: protocadherin-16 [Papio anubis]
Length = 3345
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 23/154 (14%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+G +D E+ +Y L + A D G ++ ++TV V D NDN+P FSQ +Y+ ++
Sbjct: 2381 TGPLDFEQCDRYQLQLLAHD--GPHEGRANLTVLVEDVNDNAPAFSQSLYQVML------ 2432
Query: 126 LNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELL------LTG 176
+ H S+I SVSATD D ++Y LA P++ + P G L G
Sbjct: 2433 ----LEHTPPGSAILSVSATDRDSGANGHISYHLASPADGFSVDPNNGTLFTIVGTVALG 2488
Query: 177 DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQ 210
S V ++ +EA D +P R AR V LQ
Sbjct: 2489 HDGSGAV--DVVLEARDHGTPGRAARATVHVQLQ 2520
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 86/204 (42%), Gaps = 20/204 (9%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V + P+ + YS+ Q +++ +P T E+
Sbjct: 1163 ENQPPGTSVGR--VFATDRDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEV---------- 1210
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
T +DRE+ + Y L++ D + + T V V VLD NDNSP F Q G
Sbjct: 1211 --TTLQTLDREQQSTYQLLVQVQDGGSPSHSTTGTVHVAVLDLNDNSPTFLQ-ASGAAAG 1267
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGELLLTGDP- 178
L + V +++ + + + + Y L P S L + P +GE LLT P
Sbjct: 1268 GLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFSLNPHSGE-LLTAAPL 1326
Query: 179 -PSDDVEYELTVEAHDLQSPSRYA 201
++ Y LT+ AHD SP R A
Sbjct: 1327 IRAERPHYVLTLSAHDQGSPPRSA 1350
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 25/131 (19%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LVR++++ G+ + F L + SG L + +D E A++ LV+ A
Sbjct: 2680 PHGLVRFTVSSGDPSGLFEL------------DESSGTLRLAHA-LDCETQARHQLVVQA 2726
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G + A VT++V D ND+ P F + L +SL N +++ ++
Sbjct: 2727 ADPTGAHFALAPVTIEVQDVNDHGPAFPLNL-------LSTSLAENQPPGTLVTTLHAI- 2778
Query: 144 ATDADGDKVAY 154
DGD A+
Sbjct: 2779 ----DGDAGAF 2785
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 10/119 (8%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ TF L E R + LV +G++DRE + Y L + A D
Sbjct: 227 YALSGDGAGETFRL------ETRPGPDGAPVPELVVTGELDRENRSHYMLQLEAYDGGSP 280
Query: 90 -NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+A+T + V +LD ND++P F+Q Y +V + SL + F+S A A
Sbjct: 281 PRRAQTLLDVTLLDINDHAPAFNQSRYHAVVSE---SLAPGSPVLQVFASDADAGANGA 336
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 90/218 (41%), Gaps = 45/218 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y + G D H F L S +G L V +DRE+ A++ L + A+D
Sbjct: 1627 VSYRLASGGDGH-FRL------------HSSTGALSVVQ-PLDREQRAEHILTVVASDHG 1672
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
++ T V TV V D ND +P F Q+ Y ++ + NS +S+ ++ ATD
Sbjct: 1673 SPPRSATQVLTVSVADVNDEAPTFQQQEYSVLLRE-----NS-----APGTSLLTLRATD 1722
Query: 147 AD---GDKVAYKLAVPSNLVVIVPQTGEL-LLTGDPPSDDVEYELTVEAHDLQSPSRYAR 202
D +V Y V S + P TG L L + E LTV A D SP +
Sbjct: 1723 PDLGANGQVTYG-GVSSGSFSLDPDTGVLTTLRALDREEQEEINLTVYAQDRGSPPQLTH 1781
Query: 203 EPAQVWLQ--------FNS-------PVLQDEQLLQMI 225
+V ++ F S P QD Q L M+
Sbjct: 1782 ATIRVAVEDENDHAPTFGSTHLSLEVPEGQDPQTLTML 1819
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 97/247 (39%), Gaps = 29/247 (11%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVG 120
L T+ +DRE+ Y+ ++A D T V+V ++ D ND++P F R +
Sbjct: 1958 LRTAAALDREQCPSYTFAVSAVDGAAAGPLSTTVSVTIIVRDVNDHAPTFPTSPLRLRLP 2017
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA-VPSNLVVIVPQTGELLLTG 176
S ++ ++ ++ A D D + Y+LA P + TGE+ +
Sbjct: 2018 RPGPSFSTPT------LALATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVAR 2071
Query: 177 DPPSDDV-EYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRI 235
P + + L + A DL P+R A V LQ + E+ + SEA R
Sbjct: 2072 SPVALGARDRVLFIVATDLGRPARSATGVIIVGLQGEA-----ERGPRFPRTSSEAMIRE 2126
Query: 236 EKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRV 295
T V P + G G I +++ E+ F I+ IT VR
Sbjct: 2127 NAPPGTPIVSPR-----AVHAGGTNGPITYSILSGNEKGTFSIQPSTGAIT------VRS 2175
Query: 296 KKRWDFE 302
+ DFE
Sbjct: 2176 AEGLDFE 2182
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 453 EGGEGH-FAL----------STQDSVIYLVCVARRLDREERDAYNLRVTATDSGSPPLRA 501
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + V D NDN+P F ++ Y+
Sbjct: 502 EAAFVLHVTDVNDNAPAFDRQFYQ 525
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVIT 82
H V YSI GN F L+ P E S L LV +D E + QY+L +
Sbjct: 2562 HAAVEYSIISGNWGRVFQLE-PRLAEAGESAGPGPQALGCLVLLEPLDFESLTQYNLTVA 2620
Query: 83 ATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
A D + + VTV VLD NDN PVF++ YR V
Sbjct: 2621 AADRGQPPQSSVVPVTVTVLDVNDNPPVFTRASYRVAV 2658
>gi|109107523|ref|XP_001100797.1| PREDICTED: protocadherin-16-like [Macaca mulatta]
Length = 3386
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 23/154 (14%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+G +D E+ +Y L + A D G ++ ++TV V D NDN+P FSQ +Y+ ++
Sbjct: 2422 TGPLDFEQCDRYQLQLLAHD--GPHEGRANLTVLVEDVNDNAPAFSQSLYQVML------ 2473
Query: 126 LNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLLT------G 176
+ H S+I SVSATD D ++Y LA P++ + P G L G
Sbjct: 2474 ----LEHTPPGSAILSVSATDRDSGANGHISYHLASPADGFSVDPNNGTLFTIVGTVALG 2529
Query: 177 DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQ 210
S V ++ +EA D +P R AR V LQ
Sbjct: 2530 HDGSGAV--DVVLEARDHGTPGRAARATVHVQLQ 2561
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 86/204 (42%), Gaps = 20/204 (9%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V + P+ + YS+ Q +++ +P T E+
Sbjct: 1204 ENQPPGTNVGR--VFATDRDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEV---------- 1251
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
T +DRE+ + Y L++ D + + T V V VLD NDNSP F Q G
Sbjct: 1252 --TTLQTLDREQQSTYQLLVQVQDGGSPSHSTTGTVHVAVLDLNDNSPTFLQ-ASGAAAG 1308
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGELLLTGDP- 178
L + V +++ + + + + Y L P S L + P +GE LLT P
Sbjct: 1309 GLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFSLNPHSGE-LLTAAPL 1367
Query: 179 -PSDDVEYELTVEAHDLQSPSRYA 201
++ Y LT+ AHD SP R A
Sbjct: 1368 IRAERPHYVLTLSAHDQGSPPRSA 1391
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 25/131 (19%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LVR++++ G+ F L + SG L + +D E A++ LV+ A
Sbjct: 2721 PHGLVRFTVSSGDPAGLFEL------------DESSGTLRLAHA-LDCETQARHQLVVQA 2767
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G + A VT++V D ND+ P F + L +SL N +++ ++
Sbjct: 2768 ADPAGAHFALAPVTIEVQDVNDHGPAFPLNL-------LSTSLAENQPPGTLVTTLHAI- 2819
Query: 144 ATDADGDKVAY 154
DGD A+
Sbjct: 2820 ----DGDAGAF 2826
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 91/218 (41%), Gaps = 45/218 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y + G D H F L S +G L V +DRE+ A++ L++ A+D
Sbjct: 1668 VSYRLASGGDGH-FRL------------HSSTGALSVVQ-PLDREQRAEHVLIVVASDHG 1713
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
++ T V TV V D ND +P F Q+ Y ++ + NS +S+ ++ ATD
Sbjct: 1714 SPPRSATQVLTVSVADVNDEAPTFQQQEYSVLLRE-----NS-----APGTSLLTLRATD 1763
Query: 147 AD---GDKVAYKLAVPSNLVVIVPQTGEL-LLTGDPPSDDVEYELTVEAHDLQSPSRYAR 202
D +V Y V S + P TG L L + E LTV A D SP +
Sbjct: 1764 PDLGANGQVTYG-GVSSGSFSLDPDTGVLTTLRALDREEQEEINLTVYAQDRGSPPQLTH 1822
Query: 203 EPAQVWLQ--------FNS-------PVLQDEQLLQMI 225
+V ++ F S P QD Q L M+
Sbjct: 1823 ATIRVAVEDENDHAPTFGSTHLSLEVPEGQDPQTLTML 1860
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 10/119 (8%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ TF L E R + LV +G++DRE + Y L + A D
Sbjct: 268 YALSGDGAGETFRL------ETRPGPDGAPVPELVVTGELDRENRSHYMLQLEAYDGGSP 321
Query: 90 -NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+A+T + V +LD ND++P F+Q Y +V + SL + F+S A A
Sbjct: 322 PRRAQTLLDVTLLDINDHAPAFNQSRYHAVVSE---SLAPGSPVLQVFASDADAGANGA 377
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 96/247 (38%), Gaps = 29/247 (11%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIVG 120
L T+ +DRE+ Y+ ++A D T VT+ V D ND++P F R +
Sbjct: 1999 LRTAAALDREQCPSYTFAVSAVDGAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLP 2058
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA-VPSNLVVIVPQTGELLLTG 176
S ++ ++ ++ A D D + Y+LA P + TGE+ +
Sbjct: 2059 RPGPSFSTPT------LALATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVAR 2112
Query: 177 DPPSDDV-EYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRI 235
P + + L + A DL P+R A V LQ + E+ + SEA R
Sbjct: 2113 SPVALGTRDRVLFIVATDLGRPARSATGVIIVGLQGEA-----ERGPRFPRTSSEAMIRE 2167
Query: 236 EKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRV 295
T V P + G G I +++ E+ F I+ IT VR
Sbjct: 2168 NAPPGTPIVSPR-----AVHAGGTNGPITYSILSGNEKGTFSIQPSTGAIT------VRS 2216
Query: 296 KKRWDFE 302
+ DFE
Sbjct: 2217 AEGLDFE 2223
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 494 EGGEGH-FAL----------STQDSVIYLVCVARRLDREERDAYNLRVTATDSGSPPLRA 542
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + V D NDN+P F ++ Y+
Sbjct: 543 EAAFVLHVTDVNDNAPAFDRQFYQ 566
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVIT 82
H V YSI GN F L+ P E S L LV +D E + QY+L +
Sbjct: 2603 HAAVEYSIISGNWGRVFQLE-PRLAEAGESAGPGPQALGCLVLLEPLDFESLTQYNLTVA 2661
Query: 83 ATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
A D + + VTV VLD NDN PVF++ YR V
Sbjct: 2662 AADRGQPPQSSVVPVTVTVLDVNDNPPVFTRASYRVAV 2699
>gi|270047473|ref|NP_001161798.1| protocadherin beta-17 precursor [Pan troglodytes]
gi|62510876|sp|Q5DRC3.1|PCDBH_PANTR RecName: Full=Protocadherin beta-17; Short=PCDH-beta-17; AltName:
Full=Protocadherin beta-16; Flags: Precursor
Length = 795
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+T G +DRE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LLTEGALDRESRAEYNITITVTDLGTPRLKTEYNITVLVSDVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H IGSVSATD D +V Y L P N LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQNPHLPLASLVSINTDNGH 512
Query: 172 LLLTGDPPSDDV-EYELTVEAHDLQSPS 198
L + + E+E V A D SP+
Sbjct: 513 LFALRSLDYEALQEFEFRVGATDRGSPA 540
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
YSI+ + H F RN ++ K LV +DREE Q L +TA D
Sbjct: 170 YSISTNSYFHLFT---------RNHSDGKKYPELVLDQALDREEQPQLRLTLTALDGGSP 220
Query: 90 NKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ T V + ++D NDN P F+Q+ Y V + N+ + S + +VSA D D
Sbjct: 221 PRIGTSQVLIVIVDINDNVPEFAQRRYEVQVPE-----NTPIG-----SLVITVSARDLD 270
Query: 149 G---DKVAYKLAVPSNLVV----IVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
+++Y SN ++ I TGE+ L ++++ Y + VEA D
Sbjct: 271 AGTHGELSYSFFQYSNQIIQAFEINSITGEIRLKKALDFEEIQSYHMEVEASD 323
>gi|402872879|ref|XP_003900322.1| PREDICTED: protocadherin beta-15-like [Papio anubis]
Length = 835
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 72/147 (48%), Gaps = 22/147 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE AQY++ IT TD+ K E +TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTEGALDRENKAQYNITITITDLGTPRLKTEHSITVLVSDVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP-------SNLVVIVPQTGE 171
N++ + + IGSVSATD D +V Y L P ++LV I G
Sbjct: 463 -----NNSPALY-----IGSVSATDRDSGTNSQVTYSLLPPQDPHLPLASLVSINTDNGH 512
Query: 172 LLLTGDPPSDDV-EYELTVEAHDLQSP 197
L + + E+E V A D SP
Sbjct: 513 LFALRSLDYETLQEFEFRVGATDRGSP 539
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV ++DREE A+ L +TA D ++ T + + VLD NDN+P F+Q +Y +
Sbjct: 194 LVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDVNDNAPEFAQALY-----E 248
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
++ S NS + S + VSA D D
Sbjct: 249 VQVSENSPIG-----SLVVKVSARDLD 270
>gi|440902407|gb|ELR53204.1| Protocadherin beta-16, partial [Bos grunniens mutus]
Length = 784
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 119/277 (42%), Gaps = 50/277 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DREE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTEGALDREEKAEYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPTFTQTSYTLWVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYK-------LAVPSNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L ++LV I P G
Sbjct: 463 ----NNSPALH------IGSVSATDTDAGANAQVTYSLLPPPDPLVPLASLVSINPDNGH 512
Query: 172 LL-LTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVW-LQFNSPVLQDEQLLQMIDRKS 229
L LT +E V A D SP ++ L N + Q L +
Sbjct: 513 LFALTSLDYEALRAFEFHVGATDRGSPPLSRTTLVRILVLDINDNAPEFVQPLYKVQLCE 572
Query: 230 EAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETER--EKFKIRDENPWITV 287
++P + VT + R + D G IV+A TER F+I NP
Sbjct: 573 DSP--VGSLVVTVSAR--------DLDTGSNGEIVYAFFYATERILNTFQI---NP---- 615
Query: 288 DENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
+G V +K ++E I + T+ QA +GG
Sbjct: 616 -TSGSVYLKAELNYE------VIQTY-TLTIQAKDGG 644
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 26/195 (13%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE-------IRNSTESKSGVLLVTSG 67
+L S HP I Q D + ++N T RN ++ + LV
Sbjct: 139 LLKISESSHPGSAYPLKIAQDLDVGSNTVQNYTISSNFHFHLFTRNHSDGRKYPELVLDQ 198
Query: 68 DIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
++DREE + L +TA D K T V + VLD NDN+P F+Q++Y+ V +
Sbjct: 199 ELDREEQPELRLTLTAMDGGSPPKTGTSQVLIIVLDINDNAPEFAQQLYQVQVPE----- 253
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVV----IVPQTGELLLTGDPP 179
NS + S + +VSA D D +++Y SN V+ + TG++ L
Sbjct: 254 NSPIG-----SLVITVSARDLDAGIHGELSYSFFQSSNQVIQAFEVNTATGDIRLKKKLD 308
Query: 180 SDDV-EYELTVEAHD 193
+++ Y + +EA D
Sbjct: 309 FEEIRSYHMEIEASD 323
>gi|194373689|dbj|BAG56940.1| unnamed protein product [Homo sapiens]
Length = 249
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 70/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+T G +DRE A+Y++ IT TD+ K E ++T+ V D NDN+P F+Q Y V +
Sbjct: 66 LLTEGALDRESRAEYNITITVTDLGTPRLKTEYNITLRVSDVNDNAPAFTQTSYTLFVRE 125
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H IGSVSATD D +V Y L P N LV I G
Sbjct: 126 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQNPHLPLASLVSINTDNGH 175
Query: 172 LLLTGDPPSDDV-EYELTVEAHDLQSPS 198
L + E+E V A D SP+
Sbjct: 176 LFALRSLDYKALQEFEFRVGASDRGSPA 203
>gi|395504744|ref|XP_003756707.1| PREDICTED: protocadherin beta-2-like [Sarcophilus harrisii]
Length = 825
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 79/160 (49%), Gaps = 22/160 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT D+ K+E ++TV + D NDN PVFSQ Y+ + +
Sbjct: 440 LVTEGALDRESRAEYNITITVMDLGSPRLKSEHNITVLISDVNDNPPVFSQTAYKLYLQE 499
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPS-------NLVVIVPQTGE 171
N+N + IGSVSA+D D KV Y L P + + I G
Sbjct: 500 -----NNNPALH-----IGSVSASDRDSGINAKVTYSLLPPQTEDLPLFSYISINSDNGY 549
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ 210
L + ++ ++ TV A D SPS ++ Q+ +Q
Sbjct: 550 LYALRSLDYEAIQAFQFTVRAADGGSPSLSSQVLVQIVVQ 589
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 24/119 (20%)
Query: 50 EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNS 107
+IR+S+E + LV +DRE+ ++ +L +TA D G+ V V V+D NDN+
Sbjct: 218 QIRDSSEGRKYPELVLDETLDREKQSEVTLTLTAVD-GGVPPRSGTAQVRVLVVDINDNA 276
Query: 108 PVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS----VSATDADG---DKVAYKLAVP 159
PVF+Q Y H + SSIGS VSATD D +++Y P
Sbjct: 277 PVFAQSQYNI--------------HIPENSSIGSKVVTVSATDLDAGNYGEISYTFLYP 321
>gi|119582382|gb|EAW61978.1| protocadherin beta 6 [Homo sapiens]
Length = 794
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 86/185 (46%), Gaps = 28/185 (15%)
Query: 30 YSITQGNDNHT----FALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
+S++ + H +++N +R S E+ LVT G +DRE A+Y++ IT TD
Sbjct: 366 FSVSDADSGHNQQVICSIENNLPFLLRPSVENF--YTLVTEGALDRESRAEYNITITVTD 423
Query: 86 VKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+ K + +TV V D NDN+P F+Q Y V + NS H IGSVSA
Sbjct: 424 LGTPRLKTQQSITVQVSDVNDNAPAFTQTSYTLFVRE----NNSPALH------IGSVSA 473
Query: 145 TDADGD---KVAYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
TD D +V Y L P S+LV I G L + ++ +E V A D
Sbjct: 474 TDRDSGINAQVTYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATD 533
Query: 194 LQSPS 198
SP+
Sbjct: 534 RGSPA 538
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 12/91 (13%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
L RY+I+ NP H + RN +E + LV +DREE Q L + A D
Sbjct: 166 LQRYTIS----------SNPHFHVLTRNRSEGRKFPELVLDKPLDREEQPQLRLTLIALD 215
Query: 86 VKGINKAET-HVTVDVLDENDNSPVFSQKVY 115
++ T + + VLD NDN P F+Q++Y
Sbjct: 216 GGSPPRSGTSEIQIQVLDINDNVPEFAQELY 246
>gi|449267271|gb|EMC78237.1| Protocadherin Fat 4, partial [Columba livia]
Length = 2772
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHV-TVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DREE AQY L++TATD T TVD+ D NDNSPVFSQ Y V +
Sbjct: 2566 LVTVSTLDREETAQYILIVTATDAGSPPLTTTQTFTVDISDVNDNSPVFSQTSYTMYVRE 2625
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA-------VPSNLVVIVPQTGE 171
+NV +G+VSA DAD KV Y L P + + + + G+
Sbjct: 2626 ------NNVPTVL----VGAVSAADADTGSNAKVTYSLLPAHPTEQPPCSCISVNSENGD 2675
Query: 172 LLLTGDPPSDDV-EYELTVEAHDLQSPS 198
+ + + V + E+ V A D SP+
Sbjct: 2676 VFVLRPLDYEQVKQIEVLVSASDAGSPA 2703
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 116/279 (41%), Gaps = 59/279 (21%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHV-TVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DREE AQY L +TA D T TVDV D NDN+PVF+Q +Y V +
Sbjct: 2140 LVTVSTLDREETAQYILSVTAADAGSPPLTTTQTFTVDVSDVNDNAPVFNQTLYVMYVRE 2199
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA-------VPSNLVVIVPQTGE 171
+NV +G+VSA DAD KV Y L P + + + + G+
Sbjct: 2200 ------NNVPTVL----VGAVSAADADTGSNAKVTYSLLPAHPTEQPPCSCISVNSENGD 2249
Query: 172 LLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQF-----NSPVLQDEQLLQMID 226
+ D +TV A D +SP+ ++ +WL+ N+PV + + +
Sbjct: 2250 VEELSD-------NNVTVRAADGESPALWSC--TVLWLRVLDVNDNAPVFAEARYSARVP 2300
Query: 227 RKSEAPHRIEKRRVTRAV-RPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWI 285
+ A + + R A R+ + +G + G L E
Sbjct: 2301 ENNAAGALVLRVRAWDADWGQNARVRYRLGEGRVRGA---PLSSSVSVEA---------- 2347
Query: 286 TVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
E G + + +D+EE+ + + WV +A +GG
Sbjct: 2348 ---ETGALYALRSFDYEEV---REVGLWV----RAEDGG 2376
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 70/147 (47%), Gaps = 22/147 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHV-TVDVLDENDNSPVFSQKVYRFIVGD 121
LVT ++DREE AQY L +TA D T TVD+ D NDN+PVF+Q Y V +
Sbjct: 1709 LVTMSELDREETAQYILSVTAADAGSPPLTTTQTFTVDISDVNDNAPVFNQTSYTMYVRE 1768
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA-------VPSNLVVIVPQTGE 171
+NV +G++SA DAD KV Y L P + + + + G+
Sbjct: 1769 ------NNVPTVL----VGAISAADADTGSNAKVTYSLVPAHPTEQPPCSCISVNSENGD 1818
Query: 172 LLLTGDPPSDDV-EYELTVEAHDLQSP 197
+ + + V + E+ V A D SP
Sbjct: 1819 VFVLRPLDYEQVKQIEVLVSASDAGSP 1845
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 49/100 (49%), Gaps = 18/100 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHV-TVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DREE AQY L +TA DV T TVD+ D NDN+PVF+Q Y V
Sbjct: 1278 LVTVITLDREETAQYILSVTAADVGSPPLTTTQTFTVDISDVNDNAPVFNQTSYVMYV-- 1335
Query: 122 LKSSLNSNVSHWKKFSS--IGSVSATDAD---GDKVAYKL 156
H + +G+VSA DAD KV Y L
Sbjct: 1336 ----------HENSVPTVLVGAVSAADADTGSNAKVTYSL 1365
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 48/100 (48%), Gaps = 18/100 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHV-TVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DREE AQY L +TA D T TVD+ D NDN+PVF+Q Y V
Sbjct: 742 LVTVSMLDREETAQYILSVTAADAGSPPLTTTQTFTVDISDVNDNAPVFNQTSYVMYV-- 799
Query: 122 LKSSLNSNVSHWKKFSS--IGSVSATDAD---GDKVAYKL 156
H + +G+VSA DAD KV Y L
Sbjct: 800 ----------HENSVPTVLVGAVSAADADTGSNAKVTYSL 829
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 60/104 (57%), Gaps = 16/104 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVTS +DRE+VA+Y++ + A D ++ ++T + V +LD NDN+P F+Q +Y ++
Sbjct: 209 LVTSEALDREQVAEYNVTVRARDEGSPALSVSKT-LFVRLLDVNDNAPTFTQTIYTMVLS 267
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSN 161
+ + +S+G ++ATDAD K V Y L PS+
Sbjct: 268 E----------NEPAGTSLGRLNATDADAGKNARVRYALEQPSS 301
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 75/145 (51%), Gaps = 25/145 (17%)
Query: 63 LVTSGDIDREEVAQYSLV----ITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRF 117
LVT ++DREE AQY L +TA D ++ T + + VLD NDNSP+F+Q +Y
Sbjct: 528 LVTVSELDREETAQYILTPENGLTAMDGGSPPRSGTTQIRIIVLDVNDNSPIFAQDLY-- 585
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVP----SNLVVIVPQT 169
VG + S + S + SV ATD D GD ++Y+ + + VI P +
Sbjct: 586 -VGQVLES-------APEGSVVLSVLATDLDAGPNGD-ISYQFSQAVSQSDSAFVIDPFS 636
Query: 170 GELLLTGDPPSDDVE-YELTVEAHD 193
GE+ LT + E +EL+V A D
Sbjct: 637 GEIKLTKPLDFETAENHELSVRATD 661
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 118/266 (44%), Gaps = 50/266 (18%)
Query: 41 FALKNPTT--HEIRN--STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHV 96
+AL+ P++ H + + S ++++G++ +D EE + VI T +
Sbjct: 294 YALEQPSSKGHPVESFVSVDAETGIVRALR-PLDYEEAEMHFTVIAMDGGVLPRSGTTQI 352
Query: 97 TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKV 152
+ VLD NDN+PVF+Q Y VG + + + + S + SV ATD D GD +
Sbjct: 353 HIVVLDVNDNAPVFTQDQY---VGKV-------LENAPEGSVVLSVVATDQDVGFNGD-I 401
Query: 153 AYKLAVPSNLV----VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAR----- 202
+Y+ + + + VI P +GE+ LT + E YEL+V A D S +
Sbjct: 402 SYQFSQVAGQIRSAFVIDPTSGEIKLTKPLDFEAAEKYELSVRATDGGGLSAICKVLVEV 461
Query: 203 ------EPAQVWLQFNSPVLQDE------QLLQMIDRKSEAPHRIE---KRRVTRAVRPT 247
P V F+SP+ ++ L + DR S A ++ + +++ ++RP
Sbjct: 462 VDVNDNAPELVVSSFSSPLPENALPGAVVALFAVRDRDSGANGKVSCALEDQLSFSLRPA 521
Query: 248 KR-----IDFSETDGEMEGRIVFALE 268
+ + SE D E + + E
Sbjct: 522 YKNYYELVTVSELDREETAQYILTPE 547
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 11/93 (11%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYR 116
K V LV +DREE ++ + A D ++ T + + VLD NDNSP+F+Q +Y
Sbjct: 1063 KKYVELVLKKPLDREEQSEMGFSLIAVDGGSPPRSGTTQIRIIVLDVNDNSPIFAQDLY- 1121
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
VG + + + + S + SV ATD D
Sbjct: 1122 --VGQV-------LENAPEGSVVLSVLATDLDA 1145
>gi|328791786|ref|XP_393497.4| PREDICTED: cadherin-related tumor suppressor [Apis mellifera]
Length = 4958
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 104/247 (42%), Gaps = 50/247 (20%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+ +G +DREE +Y L + A D G +A T +T+ + D+NDN P F ++ Y F +L
Sbjct: 2838 VTVNGHLDREEQDEYLLKLVAAD--GAWQAATALTITIQDQNDNPPEFDEESYHFHFPEL 2895
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELLL---- 174
+ S V+H +G V+A D D ++Y L PS+L + P TG++
Sbjct: 2896 QPS----VAH------VGQVTAIDRDKQGPNSVISYSLLQPSDLFTVDPATGDVFSKKTL 2945
Query: 175 ----TGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSE 230
T P S + Y LTV A D P +R V ++D +
Sbjct: 2946 KYKHTHRPSSPENLYSLTVVATDNGKPPLSSRTVIHV---------------SVVDANNN 2990
Query: 231 APHRIEKRRVTRAV--------RPTKRIDFSETDGEMEGRIVFALEKETE--REKFKIRD 280
AP R E+R V R + I + D + I + L E F I +
Sbjct: 2991 AP-RFEQRSYLYPVPENYGIGKRVVQLIARDDADFGVNAEISYYLVNRANGTTEHFTIDE 3049
Query: 281 ENPWITV 287
++ W+ +
Sbjct: 3050 KSGWVYI 3056
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 101/245 (41%), Gaps = 43/245 (17%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE +Y L + A D G+ + +T+ V D NDN+P F Y F V +
Sbjct: 1796 LDRETREKYVLKVRADD--GLQHTDIALTIQVTDTNDNAPTFQNTAYSFDVPE------- 1846
Query: 129 NVSHWKKFSSIGSVSATDADGD----KVAYKLAV--PSNLVVIVPQTGELLLTGDPPSDD 182
+ + S IG V ATDAD D +++Y L +++ + P TG LT +
Sbjct: 1847 ---NMPRGSRIGQVVATDADADGPNSQLSYTLISDWANDVFSLNPSTGVFTLTASLDYEQ 1903
Query: 183 VE-YELTVEAHDLQSPSRYAREPAQ---VWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKR 238
V+ Y L V+A D P+ + V L N+P+ + PH ++
Sbjct: 1904 VQHYILVVQATDGGIPALSSTVTVYCNVVDLNDNAPIFE------------AGPHAVDIV 1951
Query: 239 RVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKR 298
T P + + D GR+++A+ DEN V NG + +K
Sbjct: 1952 ENTTIGTPILSVTAQDLDSGDNGRVIYAVAGG---------DENGDFGVAPNGTLFTRKL 2002
Query: 299 WDFEE 303
D E+
Sbjct: 2003 LDREQ 2007
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 27/130 (20%)
Query: 32 ITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI-- 89
I GN+ F L+ T ++ + +G +DREE+ +Y+L + ATD KG
Sbjct: 372 IRAGNELGHFRLQTAATFDV-----------VRVNGGLDREEIPKYNLTVVATD-KGTPP 419
Query: 90 NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
A ++ + V D ND+ PVF Q Y S++ S +S F + S+SATDAD
Sbjct: 420 RSATAYLVIHVNDVNDHEPVFQQSEY--------SAVLSELSPIGSF--VASISATDADS 469
Query: 150 D---KVAYKL 156
++ Y+L
Sbjct: 470 GLNARIYYEL 479
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 32/181 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVI----TA 83
VRY I G+DN F + S+ G ++ + +++ E ++Y L I A
Sbjct: 2185 VRYGIAMGDDNRDFTI-------------SEDGGVIRVAKNLNFERKSRYYLTIRGEDCA 2231
Query: 84 TDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
++V + +T VT+ VLD NDN+PVF Y L + + V F + V
Sbjct: 2232 SEVGETPRGDTAQVTITVLDINDNAPVFLDSPY------LAHVMENMVPPGGGF--VIQV 2283
Query: 143 SATDAD----GDKVAYKLA-VPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQS 196
A DAD D+V Y L ++L I TG++ L + V EY LT+ A D S
Sbjct: 2284 KAYDADTPPYNDQVRYFLKEGDTDLFRINASTGDIFLLRPLDRESVAEYTLTLVAMDTGS 2343
Query: 197 P 197
P
Sbjct: 2344 P 2344
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 59/142 (41%), Gaps = 13/142 (9%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN + F L+ N T + + L T+G +DRE+V YSL + A D
Sbjct: 136 YFIVDGNTDGKFRLE-----VTGNPTGETTYLHLETTGKLDREQVEFYSLNVCARDRGQP 190
Query: 90 NK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ V V VLD NDN P+F Q D +LN + K ++ + D
Sbjct: 191 PRLGYLLVNVTVLDVNDNPPIFQQS-------DYVVALNESAPIGTKVLTVRATDKDSED 243
Query: 149 GDKVAYKLAVPSNLVVIVPQTG 170
K+ Y L I P TG
Sbjct: 244 NSKLTYYLPDTETQFTIDPDTG 265
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVF 110
+ TSG +DRE+VA YSL ++A G+ +T V + V+D NDN P F
Sbjct: 819 ITTSGCLDREQVAYYSLQLSAR--AGLAYGQTSVNITVVDVNDNPPRF 864
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 16/89 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y++ N F+L NP+T GV +T+ +D E+V Y LV+ A
Sbjct: 1867 PNSQLSYTLISDWANDVFSL-NPST-----------GVFTLTAS-LDYEQVQHYILVVQA 1913
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVF 110
TD GI + VTV +V+D NDN+P+F
Sbjct: 1914 TD-GGIPALSSTVTVYCNVVDLNDNAPIF 1941
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 15/83 (18%)
Query: 65 TSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQK---------- 113
T+ +DREE+A Y L+I A D + T V V VLD+NDN P F++
Sbjct: 2737 TNAKLDREEIASYELIIEARDEGQPSLTGTATVLVTVLDKNDNPPQFTRLFSVNVTENAE 2796
Query: 114 ----VYRFIVGDLKSSLNSNVSH 132
V R DL N+NVS+
Sbjct: 2797 IGTFVIRITSSDLDIGQNANVSY 2819
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 16/102 (15%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
LL SG +DRE + Y+L +TA D +G + T VTV VLDENDNSPVF + Y V
Sbjct: 2101 LLRVSGSLDRELRSNYTLEVTAKD-RGEPPRSSSTTVTVTVLDENDNSPVFDPRQYSATV 2159
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV 158
+ N+++ +S+ VSA D D +V Y +A+
Sbjct: 2160 AE-----NASIG-----ASVLQVSAMDRDEGANGRVRYGIAM 2191
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 55/123 (44%), Gaps = 23/123 (18%)
Query: 39 HTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN----KAET 94
++ A ++P R +GV+ T IDREEV Y LV+ ATD + AE
Sbjct: 1431 YSIASQDPEDQVRRFGINPSTGVIH-TLLPIDREEVDTYKLVVVATDSAQPSSARLSAEK 1489
Query: 95 HVTVDVLDENDNSPVF---------------SQK---VYRFIVGDLKSSLNSNVSHWKKF 136
V V V D NDN+P+F QK V R + DL SS N V++
Sbjct: 1490 LVIVIVEDINDNAPIFVSMSAVVLPLKGNYQYQKEITVTRLVARDLDSSTNGLVTYELLR 1549
Query: 137 SSI 139
SS+
Sbjct: 1550 SSV 1552
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 118/306 (38%), Gaps = 61/306 (19%)
Query: 12 GLPILVASSH---KHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G PIL ++ + V Y++ G++N F + + +G L T
Sbjct: 1957 GTPILSVTAQDLDSGDNGRVIYAVAGGDENGDFGV-------------APNGTLF-TRKL 2002
Query: 69 IDREEVAQYSLVITATDV---KGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
+DRE+ Y+LV++ATD G+ + T VTV +LD ND SP F + K
Sbjct: 2003 LDREQKPLYNLVLSATDSPSPPGLPLSSTVQVTVVLLDVNDMSPEF--------ISPTKI 2054
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE 184
S+ N +I +V + V Y L + + P G L ++G S D E
Sbjct: 2055 SIIENAPSNTVVMAIKAVDRDEGRNGYVEYSLEDTTLPFTVGPVDGLLRVSG---SLDRE 2111
Query: 185 ----YELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQMIDRKSEAPHRIEK 237
Y L V A D P R + V + NSPV Q + E
Sbjct: 2112 LRSNYTLEVTAKDRGEPPRSSSTTVTVTVLDENDNSPVFDPRQYSATV---------AEN 2162
Query: 238 RRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDV-RVK 296
+ +V +D E GR+ R + D+N T+ E+G V RV
Sbjct: 2163 ASIGASVLQVSAMDRDEG---ANGRV---------RYGIAMGDDNRDFTISEDGGVIRVA 2210
Query: 297 KRWDFE 302
K +FE
Sbjct: 2211 KNLNFE 2216
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 102/258 (39%), Gaps = 46/258 (17%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH 95
ND + LK T R + + LL +DRE VA+Y+L + A D +
Sbjct: 2294 NDQVRYFLKEGDTDLFRINASTGDIFLLRP---LDRESVAEYTLTLVAMDTGSPPLTGSG 2350
Query: 96 VT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDK 151
+ + VLD ND+ P F+++ YR V + NS W + ATD D K
Sbjct: 2351 IVRIVVLDVNDHIPEFTRQEYRATVTE-----NSVSRTW-----VTKPHATDKDEGLNAK 2400
Query: 152 VAYK-LAVPSNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHDLQSPSRYAREPAQV 207
+ Y L S + P+TGE+ P D + Y LT+ A D SP+ EP
Sbjct: 2401 IRYSLLGEYSERFTVDPETGEVFTV--VPLDREQTSVYHLTLVAQD-SSPT----EPQAS 2453
Query: 208 WLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDF-------SETDGEME 260
+ + + D AP R TK DF + DGE
Sbjct: 2454 AVNLT---------IFVKDVNDNAPRFSSPRYTAYVPGATKSGDFVFGAKAVDDDDGE-N 2503
Query: 261 GRIVFALEKETEREKFKI 278
RIV+ L+ + EKF I
Sbjct: 2504 SRIVYRLQG-IDAEKFAI 2520
>gi|195129685|ref|XP_002009286.1| GI13952 [Drosophila mojavensis]
gi|193920895|gb|EDW19762.1| GI13952 [Drosophila mojavensis]
Length = 2436
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 84/179 (46%), Gaps = 23/179 (12%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P Q + YSIT GN F S E +G+L T +DRE A++ L I+
Sbjct: 1220 PSQTITYSITSGNLIGYF------------SIEPHTGILRTTERKLDRENQAEHILEISI 1267
Query: 84 TDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
+D I + T V V VLD NDNSPVF Q+VY+ V S+ + N S ++ + ++
Sbjct: 1268 SDNGSPILTSTTRVVVSVLDINDNSPVFDQRVYKVQV---PSTTHINESIFQ----VHAI 1320
Query: 143 SATDADGDKVAY--KLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSR 199
D + ++ Y K N I +G + T +D EYE+ V+A D P +
Sbjct: 1321 DNDDGENSRITYSIKSGKKKNKFRIDSFSGHIFFTKSFEADS-EYEINVKAEDNGIPKK 1378
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 31/141 (21%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GN+ + F + T VLL S +D E Y+L I+ TD G
Sbjct: 1437 YNISGGNEGNYFYIGRDT-----------GNVLL--SKYLDYETQTSYNLSISVTD--GS 1481
Query: 90 NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS-HWKKFSSIGSVSATDAD 148
N A T + + V+D NDN+P F++++Y N+S + ++ S I + ATD D
Sbjct: 1482 NIAHTWLYIQVVDTNDNAPQFTKEIYHV-----------NISENIEEESVIMQLHATDRD 1530
Query: 149 GD-KVAYKLAV---PSNLVVI 165
D K+ Y+L PS+L +
Sbjct: 1531 EDKKLFYQLHATQDPSSLTLF 1551
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 14/88 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ ++I GN N +F + NP+T GV+++ + ++D E + Y+L + AT++
Sbjct: 1743 IFFNIISGNINDSFRI-NPST-----------GVIVINT-NVDYEIIKIYNLTVKATNMA 1789
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVY 115
+ + +V + VLD NDN P F Q Y
Sbjct: 1790 SQSSCQ-NVIIHVLDMNDNIPKFLQSEY 1816
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 20/135 (14%)
Query: 69 IDREEVAQYSL----VITATDVK--GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
++RE+ +Y+L +IT + K I + +T + V VLD ND SP+F Y V +
Sbjct: 132 LNREKTEEYNLKVRALITYANGKNNSIYETDTTIHVKVLDRNDLSPLFYPTEYAVTVPE- 190
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGEL-LLTGDP 178
K SI V A DAD ++ Y + S I P TG++ +L
Sbjct: 191 ---------DTPKHDSILKVIADDADLGINGEIYYSFLIESESFAIHPTTGDITILKQLN 241
Query: 179 PSDDVEYELTVEAHD 193
+++ YEL V A+D
Sbjct: 242 YAENSHYELIVLAND 256
>gi|149021384|gb|EDL78847.1| rCG59113 [Rattus norvegicus]
Length = 4589
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 122/294 (41%), Gaps = 44/294 (14%)
Query: 16 LVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVA 75
V H V Y + GN F + NP + I VT +D E +
Sbjct: 1686 FVGMVSAHSQSSVMYEVKDGNIGDAFNI-NPHSGSI------------VTQRALDFETLP 1732
Query: 76 QYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK 135
Y+L + T++ G++ T V V + DENDN P F++ Y + + +S+NS V K
Sbjct: 1733 IYTLTVQGTNMAGLS-TNTTVVVHIQDENDNPPAFTRAEYSGFISE-SASVNSVVLTDKN 1790
Query: 136 FSSIGSVSATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELT 188
+ + ATDAD + + Y++ PS N I P TG + +L+ D V + T
Sbjct: 1791 VPLV--IRATDADRESNALLVYQIVEPSVHNYFAIDPTTGAIHTVLSLDYEETRV-FHFT 1847
Query: 189 VEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTK 248
V+ HD+ +P +A A V + +ID P + + PT
Sbjct: 1848 VQVHDMGTPRLFAEYAANV-------------TVHVIDINDCPPVFSKSLYEASLLLPTY 1894
Query: 249 R------IDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
+ ++ ++ D ++++++ K EKF + + I + +R +
Sbjct: 1895 KGVNVITVNATDADSRAFSQLIYSITKGNIGEKFSMDHKTGTIAIQNTTQLRSR 1948
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 32/199 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + Y+I GN++ F++ +SK+G + + +
Sbjct: 3247 GTEVLQVYAASRDIEANAEITYAIISGNEHGKFSI------------DSKTGAIFIIE-N 3293
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E Y L + ATD ++ T V +++ D NDNSPVFSQ Y +V + ++L
Sbjct: 3294 LDYESSHGYYLTVEATDGGTPSLSDVAT-VNINITDINDNSPVFSQDSYTTVVSE-DAAL 3351
Query: 127 NSNVSHWKKFSSIGSVSATDADGDKVAYKL-----AVPSNLVVIVPQTGELLLTGDPPSD 181
V ++ A DADG ++ L + I P GE+ +T +
Sbjct: 3352 EQPVI---------TIMADDADGPSNSHILYSIIEGNQGSPFTIDPVRGEIKVTKPLDRE 3402
Query: 182 DVE-YELTVEAHDLQSPSR 199
+ Y LTV+A D +P R
Sbjct: 3403 TISGYTLTVQAADNGNPPR 3421
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 15/92 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1175 LTYRITSGNPQGFFSI------------HPKTGLITTTSRKLDREQQDEHILEVTVTD-N 1221
Query: 88 GINKAET--HVTVDVLDENDNSPVFSQKVYRF 117
G+ T V V +LDENDN P F QK Y+
Sbjct: 1222 GVPPRSTIARVIVKILDENDNRPQFLQKFYKI 1253
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P + P +RY I G++ + F + + +R T+
Sbjct: 46 ENSAAKTYV-GHPRKMGIYILDPSWEIRYKIISGDNENLFKAEEYVLGDFCFLRIRTKGG 104
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+LVI A + +A V V VLD ND P+FS Y
Sbjct: 105 NTAIL------NREVRDHYTLVIKAVEKVTDAEARAKVRVQVLDTNDLRPLFSPTSYSV- 157
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 158 ------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGVVVLT 208
Query: 176 G 176
G
Sbjct: 209 G 209
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI +GN F + +P EI+ + +DRE ++ Y+L + A D
Sbjct: 3371 ILYSIIEGNQGSPFTI-DPVRGEIK------------VTKPLDRETISGYTLTVQAADNG 3417
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+P+FS+ Y I+
Sbjct: 3418 NPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVII 3450
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 100/238 (42%), Gaps = 33/238 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD--LKSSL 126
+DRE+ Y L +TATD G ++ V V VLD NDNSPV + Y + + L L
Sbjct: 2985 LDREQKDSYLLTVTATD--GTFSSKARVEVKVLDANDNSPVCERTAYSDAIPEDALPGKL 3042
Query: 127 NSNVSHWKKFSSIGSVSATDAD---GDKVAYKL-AVPSNLVVIVPQTGEL-LLTGDPPSD 181
+ VSATDAD ++ Y L + + P TGEL L +
Sbjct: 3043 ------------VMQVSATDADIRSNAEITYTLFGSGAEKFKLNPDTGELRTLALLDREE 3090
Query: 182 DVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVT 241
Y L V+A D S A + VL E + + P+ I T
Sbjct: 3091 QAVYHLLVKATDGGGRSCQA-----------TIVLTLEDVNDNTPEFTADPYAITVFENT 3139
Query: 242 RAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
P R+ ++ D + +I ++L ++ +F I +++ + ++++ D ++ +
Sbjct: 3140 EPGTPLTRVQATDADAGLNRKISYSL-LDSADGQFSINEQSGILQLEKHLDRELQAVY 3196
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 14/87 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GND+ F + + ++G+L V S +DRE +Y+L IT D+
Sbjct: 755 YAISGGNDDSCFTV------------DMETGMLKVLS-PLDREVTDKYTLNITVYDLGIP 801
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVY 115
+A + V VLD NDN+P F Q+ Y
Sbjct: 802 QRAAWRLLDVTVLDANDNAPEFLQESY 828
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 107/252 (42%), Gaps = 40/252 (15%)
Query: 50 EIRNSTESKSGV----------LLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVT 97
EIR S SGV ++ TS +DRE + Y L + ATD +G+ + V
Sbjct: 1069 EIRYSIRDGSGVGVFRIDEETGVIETSDRLDRESTSHYWLTVYATD-QGVVPLSSFIEVY 1127
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAY 154
++V D NDN+P S+ VY + + + K S+ + A D D DK+ Y
Sbjct: 1128 IEVEDVNDNAPQTSEPVYYPEI----------MENSPKDVSVVQIEAFDPDSSSSDKLTY 1177
Query: 155 KLAV--PSNLVVIVPQTGELLLTGDP----PSDDVEYELTVEAHDLQSPSRYAREPAQVW 208
++ P I P+TG + T D+ E+TV + + S AR ++
Sbjct: 1178 RITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEVTVTDNGVPPRSTIARVIVKIL 1237
Query: 209 LQF-NSP-VLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFA 266
+ N P LQ +++ +R+ R KR P R+ ++ D + ++
Sbjct: 1238 DENDNRPQFLQKFYKIRLPEREKADGDRSAKR------EPLYRVIAADKDEGPNAELSYS 1291
Query: 267 LEKETEREKFKI 278
+E+ E +F I
Sbjct: 1292 IEEGNEHGRFSI 1303
>gi|119514213|gb|ABL75876.1| protocadherin 2G1 [Takifugu rubripes]
Length = 1013
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 99/207 (47%), Gaps = 42/207 (20%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
RY I Q NDN + N V LV +DRE+ + +L++TA D
Sbjct: 241 RY-ILQKNDNFILSADN-------------KKVELVLENRLDREKQKEMNLLLTALDGGS 286
Query: 89 INKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
++ T V V VLD NDN+PVFSQ VY K+SL N + + VSATDA
Sbjct: 287 PQRSGTVVIHVTVLDANDNAPVFSQAVY-------KASLPEN---SPLDTVVMQVSATDA 336
Query: 148 D----GDKVAYKLAVPS----NLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQ 195
D GD V Y S N+ + PQ+GE+ +TG D E +E+ VEA D
Sbjct: 337 DEGVNGD-VKYDFGHLSDEDVNVFSVDPQSGEIRVTG---LIDYEERRSFEMRVEAKDGL 392
Query: 196 SPSRYAREPAQVW-LQFNSPVLQDEQL 221
+ YA+ +V + N+PV+Q + L
Sbjct: 393 GLTSYAKIVIEVIDVNDNAPVIQLKSL 419
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIV-- 119
LVT+G +DRE V+ Y++ I+ATD + T + + V D NDN PVF ++ Y V
Sbjct: 471 LVTTGQLDRELVSDYNITISATDEGSPPLSSTKTLHLSVADINDNPPVFEEESYSAYVSE 530
Query: 120 ----GDLKSSLNSNVSHWKKFSS-IGSVSATDADGDKVAYKLAV 158
G S+++ W++ + I S+ A + +G V+ ++V
Sbjct: 531 NNRAGSTLCSVSAGDPDWRQNGTVIYSLLAAEVNGAPVSSYVSV 574
>gi|326435630|gb|EGD81200.1| tyrosine phosphatase [Salpingoeca sp. ATCC 50818]
Length = 8158
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 107/223 (47%), Gaps = 42/223 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ GT V+ L A P VRY+IT G F L +PTT G
Sbjct: 1226 EHTAVGTVVQELVATDADQANTPASAVRYNITGGAFARFFTL-SPTT-----------GA 1273
Query: 62 LLVTSGDIDREEVAQYSL----VITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYR 116
L V + DIDRE +A ++ V+TA + G + A TH + V + D NDN+PVF Y
Sbjct: 1274 LAV-AADIDREALAAQAITGDVVVTAYN-PGSDLASTHTMQVTIADINDNTPVFEFAQY- 1330
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GD--KVAYKLAVPSN-LVVIVPQTGEL 172
N+ ++ ++ + +V+ATDAD GD +V Y+L V S L I TG
Sbjct: 1331 ----------NATIAEGEQGVVVATVTATDADAGDNARVQYELDVASRALFAIDAATG-- 1378
Query: 173 LLTGDPPSDDVE------YELTVEAHDLQSPSRYAREPAQVWL 209
++T S D+E Y L+V A D + SR + +V++
Sbjct: 1379 VITTRTSSIDLETDAQATYMLSVTARDGGASSRSSTAHVRVFV 1421
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 116/263 (44%), Gaps = 44/263 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATD-VKGINKAETH---VTVDVLDENDNSPVFSQKVYRFI 118
L SG++DRE V Y+LV+ A D G ++A + V V V DENDN+P+F+
Sbjct: 6792 LAVSGNVDREAVTAYTLVVFAVDGATGTDQARSQDLVVRVAVGDENDNAPMFAASTTA-- 6849
Query: 119 VGDLKSSLNSNVSHW----KKFSSIGS----VSATDAD-GDKVAYKLAVPSN--LVVIVP 167
+S ++ + + ++ S+GS ++ATDAD G A A+ S+ V V
Sbjct: 6850 ----GASFDATRATYQVSVQEDVSVGSEVLLLAATDADEGANAALTFALVSSGGAGVSVS 6905
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSPSRYAREPAQVW-LQFN--SPVLQDEQL 221
+G + LT P D +YEL VE D S AR Q+ L N +P +
Sbjct: 6906 SSGAITLTS--PLDRETTAQYELVVEVLDGGSQPLGARATVQLTVLDVNDVTPAFVPASI 6963
Query: 222 LQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDE 281
++ + +AP + VR +D E + G +VFAL +
Sbjct: 6964 ADLVLSEDQAPGMV--------VRTLAAVDNDEGN---NGDLVFALITGVDTLSAV---S 7009
Query: 282 NPWITVDENGDVRVKKRWDFEEL 304
P+ GDV V D+E++
Sbjct: 7010 GPFSIDASTGDVYVSA-LDYEQM 7031
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 34/218 (15%)
Query: 94 THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---D 150
T VT+ VLD NDN+PVF++ G S+ N + +G V TDAD +
Sbjct: 6383 TTVTITVLDTNDNAPVFTEG------GSYAMSVAEN---EGVGAVVGRVQVTDADSGVNE 6433
Query: 151 KVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDV--EYELTVEAHDLQSPSRYAREPAQV 207
V++ L ++L + P +G ++ T P +V EY LTV A D SP V
Sbjct: 6434 LVSFMLVGGRADLFSVNPVSG-VVTTLQPLDREVQAEYALTVLALDQGSPQLSTNATVTV 6492
Query: 208 WL-QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFA 266
+ N Q +Q + ++ E+R T AV P + + + TDG+ + +VF+
Sbjct: 6493 TVGNVNDNAPQFDQAVYRVEVD-------ERRGTTGAVVPLRAVRLTATDGDGDA-MVFS 6544
Query: 267 LEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEEL 304
L + ++ V NGDV V +D E+L
Sbjct: 6545 LAPTPFAQ---------YVQVFTNGDVFVTPSFDHEQL 6573
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 69/133 (51%), Gaps = 16/133 (12%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+DRE A+Y+L + A D +G + T+ VTV V + NDN+P F Q VYR V + + +
Sbjct: 6462 LDREVQAEYALTVLALD-QGSPQLSTNATVTVTVGNVNDNAPQFDQAVYRVEVDERRGTT 6520
Query: 127 NSNVSHWKKFSSIGSVSATDADGDKVAYKLA-VPSNLVVIVPQTGELLLTGDPPSDD--- 182
+ V ++ATD DGD + + LA P V V G++ +T PS D
Sbjct: 6521 GAVVPLRAV-----RLTATDGDGDAMVFSLAPTPFAQYVQVFTNGDVFVT---PSFDHEQ 6572
Query: 183 -VEYELTVEAHDL 194
++ +TVE D+
Sbjct: 6573 LTQFNVTVEVTDV 6585
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 72/150 (48%), Gaps = 12/150 (8%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQK 113
E SGVL+V S +D E A+Y L++ +D + + ++TV +LDENDN+PVF
Sbjct: 1881 EPASGVLVVQSA-VDSETYAEYRLLVRVSDAGSPSPRSVDFNITVAILDENDNAPVFVDA 1939
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVP----- 167
G + N + + ++ G V A DAD GD A A+ N ++P
Sbjct: 1940 DGSATDGAVGYVFNVS-ENTSAPAAAGRVYAPDADAGDNGAVAFAI-DNTAALLPFVIDA 1997
Query: 168 QTGELLLTGDPPSDDV-EYELTVEAHDLQS 196
QTG + ++ +DV Y V A D S
Sbjct: 1998 QTGVISVSSALDREDVGAYTFVVVATDQAS 2027
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 32/173 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI G + FA+ + T ++R +T +DRE + +L I A D
Sbjct: 4102 IVYSIRDGAGSSNFAIDS-ATGDVRPTTA------------LDREVLPVITLTIVAEDGG 4148
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G+ T V + + D+NDN P F+ Y V + + W + +G+V A D
Sbjct: 4149 GLQGTTTAV-ITLFDQNDNQPEFANATYTLTVAE-------GMPAWTR---VGAVVAQDR 4197
Query: 148 DGDK---VAYKLAVPSN--LVVIVPQTGELLLTG--DPPSDDVEYELTVEAHD 193
D D +AY L+ + L + TGE+ T D + D Y T+ A D
Sbjct: 4198 DSDANAIIAYSLSGSGDEALFWVNGSTGEIFATAEFDRETKD-AYTFTITARD 4249
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 62/136 (45%), Gaps = 17/136 (12%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQ-YSLVITAT---DVKGIN 90
DN T + R + SG + T+ +DRE Y L + A D G +
Sbjct: 2313 AGDNAVVVYTLADTFDGRFAINGTSGAI-TTTASLDREAAPNGYVLAVVAANLNDATGPS 2371
Query: 91 KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS------LNSNVSHWKKFSSIGSVSA 144
A +VTV + D NDN PVF Q+ Y F V + S +N + +F +G+V A
Sbjct: 2372 SA-VNVTVHITDINDNPPVFEQQSYAFTVAEADGSTAGVTGAANNNDNAVQF--VGTVRA 2428
Query: 145 TDAD-GD--KVAYKLA 157
T AD GD ++ Y LA
Sbjct: 2429 TSADIGDNARIVYALA 2444
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 52/109 (47%), Gaps = 22/109 (20%)
Query: 28 VRYSITQGNDNHTFAL-------------KNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
+ ++ GND FAL P T N T + G L D E V
Sbjct: 1602 IAFAFATGNDAGAFALTPARVVVVAVPGIAEPVTVYASNITVAPRGPGL------DHEAV 1655
Query: 75 AQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIVGD 121
A ++L++TATD +G+ +A +VTV+V D +DN+P F Q VY V +
Sbjct: 1656 AVHNLMVTATD-QGVRQATATLNVTVEVGDVDDNAPRFQQGVYAHTVAE 1703
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 14/81 (17%)
Query: 69 IDREEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE V Y V+ ATD G+N A HV VD D NDN+P F Q Y V + + ++
Sbjct: 5613 LDRETVQAYRFVVVATDEDGLNSTASVHVIVD--DVNDNAPAFVQGGYSATVAENTAGVD 5670
Query: 128 SNVSHWKKFSSIGSVSATDAD 148
+ +++ATDAD
Sbjct: 5671 -----------LITLAATDAD 5680
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 60 GVLLVTSG-DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
GV+ + +G +DREE +Y L++ A+D+ G+N + V + V D NDN+P F Y
Sbjct: 4443 GVIRLAAGATLDREEQNEYVLLVAASDIGGLNDTQAVVLL-VTDVNDNAPTFDAPAYSIA 4501
Query: 119 V 119
V
Sbjct: 4502 V 4502
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 26/155 (16%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHV-TVDVLDENDNSPVF-S 111
+ ++ +GV+ + + DRE A+++ + A D +++ TV V D NDNSP F +
Sbjct: 3454 AVDAHTGVITLATA-FDRETQAEHTFTVRAQDAGQPPRSDVATFTVTVGDVNDNSPAFVT 3512
Query: 112 QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVP--SNLVVIV 166
Q RF V +L + + +G V+ATDAD + +AY + + I
Sbjct: 3513 QDGARFTVSELAGT----------GTRVGGVTATDADAGENAAIAYSIVAGNDAGFFAID 3562
Query: 167 PQTGELLLTG--------DPPSDDVEYELTVEAHD 193
++GE+ + G PS D LT+EA +
Sbjct: 3563 TESGEVTIGGVLPAGAFTGRPSADRSVTLTIEASN 3597
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 20/181 (11%)
Query: 27 LVRYSITQGNDNHTFALK-NPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
+VR + +++ T A++ + TH + ++++G + T +DRE V YS+V+TATD
Sbjct: 3322 VVRVAAQDADEDGTQAVRFSLATHASEFAIDAETG-QITTRVVLDREAVPVYSVVVTATD 3380
Query: 86 VKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
N T+VTV V D+NDN+P ++G S+L + + I ++
Sbjct: 3381 SAVRNPLSTNVTVTVAVDDKNDNNP--------LLIG-APSALTISEDTLVG-ARIAVLN 3430
Query: 144 ATDAD----GDKVAYKLAVPSNLVVIVPQTGEL-LLTGDPPSDDVEYELTVEAHDLQSPS 198
ATDAD GD V + + + TG + L T E+ TV A D P
Sbjct: 3431 ATDADVGPNGD-VTFAFVGAQRFLAVDAHTGVITLATAFDRETQAEHTFTVRAQDAGQPP 3489
Query: 199 R 199
R
Sbjct: 3490 R 3490
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
L T+ +DREE Y+L ++A+D G +A V V V+D NDN+PVF ++ Y
Sbjct: 4019 LSTNAVLDREEEDAYALTVSASDPGG-RRAVATVLVRVVDVNDNAPVFERERY 4070
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 89/206 (43%), Gaps = 41/206 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI GN FA+ ++ +GV+ T+G +DRE A Y+L + A D
Sbjct: 2652 VSYSIVGGNAAGLFAI------------DAATGVVR-TTGPLDRETDAAYNLTVQAAD-- 2696
Query: 88 GIN-----KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
N A V V V D NDN+PVF+ Y ++ N + +G+V
Sbjct: 2697 --NGEPPLTATVAVPVVVGDVNDNAPVFTSNAYYAWSVSEDAAPN---------TLLGTV 2745
Query: 143 SATDADGD---KVAYKLA-VPSNLVVIVPQTGELLLTGDPPSDDVE--YELTVEAHDLQS 196
+A+DAD +V Y L + L + TGE+ LTG + + L V A D +
Sbjct: 2746 AASDADAGANARVTYSLINATAPLFSVDATTGEVRLTGGQLDRETAETHTLVVRARDSGA 2805
Query: 197 PSRYAREPAQVWLQF----NSPVLQD 218
P + + + V N+PV D
Sbjct: 2806 PVQLSTDATIVLTVLDVNDNAPVFVD 2831
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 15/91 (16%)
Query: 66 SGDIDREEVAQYSLVITATD----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+G +DRE+ Y + ATD V A T +++ +LD NDN+PVFS F+V
Sbjct: 4338 AGALDREQQELYVFDVVATDNAASVDQRRSARTTISIALLDVNDNAPVFSHG--EFVV-- 4393
Query: 122 LKSSLNSNVSHWKKFSS-IGSVSATDADGDK 151
NVS +G V ATDAD ++
Sbjct: 4394 ------FNVSEAAAGGDVVGRVIATDADAEE 4418
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 9/84 (10%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH 95
N + T+AL+ +TH + ++ SG L V +DRE +Y+L I ATD +G+ + +
Sbjct: 5433 NSDVTYALR--STHNDTFALDALSGRLRVLK-PLDRETRDRYALTIVATD-RGVEQ-QLQ 5487
Query: 96 VTVDVL----DENDNSPVFSQKVY 115
T D+L D NDN+P F Q +Y
Sbjct: 5488 TTFDMLVRVQDVNDNAPQFDQVLY 5511
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 13/69 (18%)
Query: 53 NSTESKSGVLLVTS--------GDIDREEVAQYSLVITATDVKGINKA---ETHVTVDVL 101
+ST SGV + S G +DRE A ++LV+ ATD G + A + VTV V
Sbjct: 3675 DSTADTSGVFAIDSASGEVRVRGAVDREAQALFTLVVRATD--GGSPALFTDATVTVAVT 3732
Query: 102 DENDNSPVF 110
DEND+SP F
Sbjct: 3733 DENDSSPSF 3741
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 12/97 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQ--YSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQ 112
++ +GV+ + ID E AQ Y L +TA D +++ T HV V V D ND +P F Q
Sbjct: 1374 DAATGVITTRTSSIDLETDAQATYMLSVTARDGGASSRSSTAHVRVFVTDANDVAPRFEQ 1433
Query: 113 KVYRFIVGDLK---------SSLNSNVSHWKKFSSIG 140
Y + D++ S ++ +VS + +S+
Sbjct: 1434 STYTVTISDVQEGPVALARVSVVDGDVSLVNRITSVA 1470
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 94/209 (44%), Gaps = 39/209 (18%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+E++ GT + G+ + + + V Y+I GN N FA+ +PTT G
Sbjct: 2519 LEDAAPGTPI-GVQVAARDADLGGNGTVAYAIVAGNTNSDFAV-DPTT-----------G 2565
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDE---NDNSPVFSQKVYRF 117
V+ V +D E V Y+L + A+D +G + +T + V+ ND +PVF+ V
Sbjct: 2566 VVSVAR-RLDFESVVSYTLTMRASD-QGTPQPKTADVLVVVSLVDANDEAPVFNADVGAQ 2623
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKL--AVPSNLVVIVPQTGE 171
+V + +L + F ATDAD ++V+Y + + L I TG
Sbjct: 2624 VVAE---NLPAGKVAAAPF-------ATDADITAGFNRVSYSIVGGNAAGLFAIDAATGV 2673
Query: 172 LLLTGDPPSD---DVEYELTVEAHDLQSP 197
+ TG P D D Y LTV+A D P
Sbjct: 2674 VRTTG--PLDRETDAAYNLTVQAADNGEP 2700
>gi|297676226|ref|XP_002816046.1| PREDICTED: protocadherin beta-9 [Pongo abelii]
Length = 797
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ IT TD+ K E ++T+ V D NDN+P F+Q Y V
Sbjct: 402 ILMTEGALDRESKAEYNITITVTDLGTPRLKTEYNITLQVCDVNDNAPAFTQTSYTLFVR 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPS--------NLVVIVPQT 169
+ NS H IGSVSATD D +V Y L +PS +LV I
Sbjct: 462 E----NNSPALH------IGSVSATDRDSGTNAQVTYSL-LPSQDPHLPLASLVSINADN 510
Query: 170 GELLLTGDPPSDDV-EYELTVEAHDLQSPS 198
G L + + E+E V A D SP+
Sbjct: 511 GHLFALRSLDYEALQEFEFRVGARDRGSPA 540
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 16/86 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY------ 115
LV +DREE + SL +TA D +++ T + + VLD NDN+P F+Q +Y
Sbjct: 194 LVLDKALDREEQGELSLTLTALDGGSPSRSGTSTLRIVVLDVNDNAPQFAQALYETQAPE 253
Query: 116 ---------RFIVGDLKSSLNSNVSH 132
+ GD+ S +N+ VS+
Sbjct: 254 NSPVGSPIVKVSAGDVDSGVNAEVSY 279
>gi|301756110|ref|XP_002913894.1| PREDICTED: protocadherin-23-like [Ailuropoda melanoleuca]
Length = 3357
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 117/263 (44%), Gaps = 58/263 (22%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
H + Y I GN+ F L E +GVL + +D EE +++L + A+
Sbjct: 2684 HAEIIYHIISGNEKGHFHL------------EETTGVLYLIK-PLDYEETTKFTLTVQAS 2730
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
D + + + T V ++VLD+ND++P +F+ L ++ NV FS++ SV A
Sbjct: 2731 DEEKKHFSFTVVFINVLDDNDHAP-------QFMFSSLTCAVPENV---PVFSTVCSVRA 2780
Query: 145 TDADG---DKVAYKLAVPSNLVVIVPQTGELL----LTGDPPS-------DDVEYELTVE 190
+D+D ++ Y + P ++ +P+ + LTGD + +D +Y LTV+
Sbjct: 2781 SDSDAGPYGELVYSVVSPCSVTHGLPRDRDPFLIDPLTGDIHTQQVLDYENDSKYCLTVQ 2840
Query: 191 AHDLQSPSRYAREPAQVWLQFNS-----PVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVR 245
A D + VWL P+ E+ + K++A I
Sbjct: 2841 AKDKGD----STATLMVWLDIEGIDEFEPIFTQEEYFFNLPEKNKARELI---------- 2886
Query: 246 PTKRIDFSETDGEMEGRIVFALE 268
R++ S+ D M+G ++++LE
Sbjct: 2887 --GRVEASDADAGMDGVVLYSLE 2907
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 16/90 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
V YSI GN+N F L KS LL T+ +D E AQ+ L + A D
Sbjct: 1641 VTYSIISGNENMAFMLD-------------KSSGLLTTTCPLDYEIKAQHILTLLALDDG 1687
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVY 115
+ ++ ++T +T+ VLD ND +PVF QK+Y
Sbjct: 1688 IPALSSSQT-LTITVLDVNDEAPVFQQKLY 1716
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 14/114 (12%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D E ++Y L + A D KG + A V +D+ ++ P+F+Q+ Y F + +
Sbjct: 2827 LDYENDSKYCLTVQAKD-KGDSTATLMVWLDIEGIDEFEPIFTQEEYFFNLPEKN----- 2880
Query: 129 NVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPP 179
K IG V A+DAD V Y L PS ++ G + L G PP
Sbjct: 2881 -----KARELIGRVEASDADAGMDGVVLYSLETPSPFFLVNKTNGNIYLIGAPP 2929
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 14/90 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
VRY + GN + FA+ N T+ E L T+ +DRE+++ ++LVI +D+
Sbjct: 1850 VRYRVIDGNTDGYFAI-NETSGE------------LSTTHALDREQISNFTLVILCSDLG 1896
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYR 116
+ + V VLD+ND+ P F +Y+
Sbjct: 1897 DPPRTSLVQLQVRVLDDNDHGPSFPTLLYQ 1926
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 56/125 (44%), Gaps = 24/125 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD--VK 87
YSI GN + F ++ T I + K LV +DRE A + LVI A+D
Sbjct: 2574 YSIISGNSQNNFHVE---TSFIHSEYPYKQVGYLVLLHSLDREAAASHKLVILASDHGFP 2630
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS----VS 143
++ T V ++VLD NDN P F Y +H K+ + +GS VS
Sbjct: 2631 PLSSTAT-VAIEVLDVNDNPPKFHSLKYH--------------AHVKESTPLGSHITVVS 2675
Query: 144 ATDAD 148
ATD D
Sbjct: 2676 ATDRD 2680
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 19/120 (15%)
Query: 63 LVTSGDIDRE-EVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+ S DIDRE + A Y L++ A D G++ A+ V V++ D NDN PVF+ Y +
Sbjct: 711 ICVSQDIDRERDPATYDLLVKAKDGGGLS-AQAFVRVEMEDVNDNEPVFNPSTYVMSIS- 768
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP---SNLVVIVPQTGELLLT 175
+ + I +V ATD D VAY+L +P S+L I TG + LT
Sbjct: 769 ---------GQTQPGTEIINVLATDRDSGIYGTVAYEL-IPGDLSSLFTIDSTTGIIYLT 818
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 18/121 (14%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQ-LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
EN +GT + + VA+ P Q ++YSI GN++ F+L S SG
Sbjct: 2137 ENCDAGTSI----VTVAAVAPDPIQDSIKYSIFSGNEDGVFSLC------------SSSG 2180
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
L V EV +I + +G ++A + V V + D NDN P F Q VY V
Sbjct: 2181 ELTVKEPKFLDFEVRHEVRLIVLAESRG-HRAYSKVAVLIQDVNDNLPCFEQSVYHVSVS 2239
Query: 121 D 121
+
Sbjct: 2240 E 2240
>gi|426350411|ref|XP_004042768.1| PREDICTED: protocadherin beta-16 [Gorilla gorilla gorilla]
Length = 1012
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 109/239 (45%), Gaps = 33/239 (13%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ IT TD+ K E +T+ V D NDN+P F+Q Y V
Sbjct: 402 ILMTEGALDRESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVR 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 462 E----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNG 511
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ----- 220
L + ++ +E V A D SP+ + +V + NSP VL Q
Sbjct: 512 HLFALRSLDYEALQAFEFRVSATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSAP 571
Query: 221 LLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETD-GEMEGRIVFALEKETEREKFKI 278
+++ R +E P + R TK + ET+ + G +++ +ETE+ F +
Sbjct: 572 CTELVPRAAE-PGYLVTSYFKANTRKTKTSESKETEIAKSSGFGRYSVTEETEKGSFVV 629
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 77/154 (50%), Gaps = 22/154 (14%)
Query: 49 HEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNS 107
HE+R+ + LV ++DREE Q L +TA D ++ T V ++V+D NDN+
Sbjct: 183 HELRDGRKYPE---LVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNA 239
Query: 108 PVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP----S 160
P F Q +Y+ + + NS + S + +VSA D DG K++Y L P S
Sbjct: 240 PEFEQPIYKVQIPE-----NSPLG-----SLVATVSARDLDGGANGKISYTLFQPSEDIS 289
Query: 161 NLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHD 193
+ + P TGE+ L + V YE+ ++A D
Sbjct: 290 KTLEVNPMTGEIRLREQVDFETVTSYEVDIKATD 323
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
LV +DREE A+ SL +TA D +++ T V + VLD NDN+P F+Q +Y
Sbjct: 777 LVLDKALDREEQAELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALY 830
>gi|355749714|gb|EHH54113.1| hypothetical protein EGM_14874 [Macaca fascicularis]
Length = 4591
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 122/287 (42%), Gaps = 44/287 (15%)
Query: 23 HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVIT 82
H V Y I GN F + NP + I +T +D E + Y+L+I
Sbjct: 1695 HSQSSVVYEIKDGNTGDAFDI-NPHSGSI------------ITQKALDFETLPVYTLIIQ 1741
Query: 83 ATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
T++ G++ T V+V + DENDNSPVF Q Y ++ + +S+NS V + + +
Sbjct: 1742 GTNMAGLS-TNTTVSVQLQDENDNSPVFMQAEYTGLISE-SASINSVVLTDRNVPLV--I 1797
Query: 143 SATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQ 195
A DAD D + Y + PS I TG + +L+ D + + TV+ HD+
Sbjct: 1798 RAADADKDSNALLVYHIVEPSVHKYFAIDSSTGAIHTVLSLD-YEETSTFHFTVQVHDMG 1856
Query: 196 SPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKR------ 249
+P +A A V + +ID P + + PT +
Sbjct: 1857 TPRLFAEYAANV-------------TIHVIDINDCPPVFAKPLYEASLLLPTYKGVKVIT 1903
Query: 250 IDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
++ ++ D ++++++ + EKF + + +TV +R +
Sbjct: 1904 VNATDADSSAFSQLIYSITEGNIGEKFSMDYKTGALTVQNTTQLRSR 1950
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + HP VRY I G+ + F + + +R T+
Sbjct: 45 ENSAAKTYV-GHPVKMGIYMTHPSWEVRYKIVSGDSENLFKAEEYVLGDFCFLRIRTKGG 103
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A T V V VLD ND P+FS Y
Sbjct: 104 NTAIL------NREVKDHYTLIVKAVEKNTNMEARTKVRVQVLDTNDLRPLFSPTSYSV- 156
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 157 ------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGVIVLT 207
Query: 176 G 176
G
Sbjct: 208 G 208
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 90/199 (45%), Gaps = 32/199 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + YSI GN++ F++ +SK+G + + +
Sbjct: 3249 GTEVLQVYAASRDIEANAEITYSIISGNEHGKFSI------------DSKTGAVFIIE-N 3295
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L I ATD ++ T V V+V D NDN+PVFSQ Y +V + + L
Sbjct: 3296 LDYESSHEYYLTIEATDGGTPSLSDVAT-VNVNVTDVNDNAPVFSQDTYTAVVSE-DAVL 3353
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
S+ +V A DADG + Y + I P GE+ +T +
Sbjct: 3354 E---------QSVITVLADDADGPSNSHIHYSIIDGNQGGPFTIDPVRGEVKVTKLLDRE 3404
Query: 182 DVE-YELTVEAHDLQSPSR 199
+ Y LTV+A D SP R
Sbjct: 3405 TISGYTLTVQASDNGSPPR 3423
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y IT GN FA+ K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1176 YRITSGNPQGFFAV------------HPKTGLITTTSRKLDREQQDEHILEVTVTDNGSP 1223
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRF 117
K+ V V +LDENDN P F QK Y+
Sbjct: 1224 PKSTIARVIVKILDENDNKPQFLQKFYKI 1252
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN F + +P E++ + +DRE ++ Y+L + A+D
Sbjct: 3373 IHYSIIDGNQGGPFTI-DPVRGEVK------------VTKLLDRETISGYTLTVQASDNG 3419
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+PVFS+ Y I+
Sbjct: 3420 SPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVII 3452
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 105/250 (42%), Gaps = 36/250 (14%)
Query: 50 EIRNSTESKSGV----------LLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVT 97
EIR S SGV ++ TS +DRE + Y L + ATD +G+ + +
Sbjct: 1068 EIRYSIRDGSGVGVFKIGEETGIIETSDRLDRESTSHYWLTVFATD-QGVVPLSSFIEIY 1126
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAY 154
++V D NDN+P S+ VY + + + K S+ + A D D DK+ Y
Sbjct: 1127 IEVEDVNDNAPQTSEPVYYPEI----------LENSPKDVSVVQIEAFDPDLSSNDKLVY 1176
Query: 155 KLAV--PSNLVVIVPQTGELLLTG---DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL 209
++ P + P+TG + T D D E+ L V D SP + A+V +
Sbjct: 1177 RITSGNPQGFFAVHPKTGLITTTSRKLDREQQD-EHILEVTVTDNGSPPK--STIARVIV 1233
Query: 210 QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVR-PTKRIDFSETDGEMEGRIVFALE 268
+ Q LQ K P R + R A R P R+ ++ D I +++E
Sbjct: 1234 KILDENDNKPQFLQKF-YKIRLPEREKPDRERNARREPLYRVIATDKDEGPNAEISYSIE 1292
Query: 269 KETEREKFKI 278
+ E KF I
Sbjct: 1293 EGNEHGKFFI 1302
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 77/173 (44%), Gaps = 32/173 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N I+N + + +DRE+ Y L ITATD
Sbjct: 2957 VTYFITGGDPLGQFAVEN-----IQNEWK------VYVKKPLDREKRDNYLLTITATD-- 3003
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G ++ V V VLD NDNSPV + +Y ++ +V K I +SA DA
Sbjct: 3004 GTFSSKAIVEVKVLDANDNSPVCEKTLY-------SDTIPEDVLPGKL---IMQISAADA 3053
Query: 148 D---GDKVAYK-LAVPSNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHD 193
D ++ Y L + + P TGEL + P D E Y L V A D
Sbjct: 3054 DIRSNAEITYTLLGSGAEKFQLNPDTGELKTSA--PLDREEQAVYHLLVRATD 3104
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 108/271 (39%), Gaps = 47/271 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
L TS +DREE A Y L++ ATD +G + + + + D NDN+P FS Y V
Sbjct: 3082 LKTSAPLDREEQAVYHLLVRATD-RGGRFCQASIVLALEDVNDNAPEFSADPYAITV--- 3137
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVIVPQTGELLLTGDPP 179
+ + + + V ATDAD K+ Y L ++ + + ++ P
Sbjct: 3138 -------FENTEPGTLLTRVQATDADSGLNRKILYSLIDSADGQFSINELSGIIQLEKPL 3190
Query: 180 SDDVE--YELTVEAHDLQSPSRYAREPAQVW----LQFNSPVLQDEQLLQMIDRKSEAPH 233
+++ Y L+++A D P R V + N PV + + +
Sbjct: 3191 DRELQAVYTLSLKAVDQGLPRRLTATGTVVVSVLDINDNPPVFEYREYGATVSEDILV-- 3248
Query: 234 RIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDV 293
E +V A R D E I +++ E KF I + + + EN D
Sbjct: 3249 GTEVLQVYAASR----------DIEANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDY 3298
Query: 294 RVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
E + ++++TI +AT+GG
Sbjct: 3299 -------------ESSHEYYLTI--EATDGG 3314
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 126/288 (43%), Gaps = 62/288 (21%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GN++ F + + ++G+L + S +DRE +Y+L IT D+
Sbjct: 754 YAISGGNEDSCFMI------------DMETGMLKILS-PLDRETTDKYTLNITVYDLGIP 800
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
KA + V V+D NDN P F Q+ Y V + K + S I V ATD D
Sbjct: 801 QKAAWRLLDVVVVDANDNPPEFLQESYFVEVSEDK----------EVHSEIIQVEATDKD 850
Query: 149 ---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYE--LTVEAHDLQSPSRYARE 203
V Y + ++ I TG + +T P ++++E L +EA D ARE
Sbjct: 851 LGPNGHVTYSILTDTDKFSIDSATGVVKIT-HPLDRELQHEHYLKIEARD------QARE 903
Query: 204 PAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRI 263
Q+ F++ VL+ + + D P + + P R+ E EG +
Sbjct: 904 EPQL---FSTVVLK----VSLEDVNDNPP---------KFIPPNYRVKVRE--DLPEGTV 945
Query: 264 VFALEK------ETEREKFKIRDENPW-ITVDE-NGDVRVKKRWDFEE 303
+ LE ++ + ++ + D VD+ +G VR+ ++ DFE+
Sbjct: 946 IMWLEAHDPDLGQSGQVRYSLMDHGEGNFDVDKLSGAVRIVQQLDFEK 993
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 61/133 (45%), Gaps = 26/133 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSIT G+ F + T GV+ V + +D E Y L I ATD
Sbjct: 2217 VFYSITDGDPFSQFTINFNT------------GVINVIA-PLDFEAHPAYKLSIRATDSL 2263
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
AE V + V D NDN+PVF+Q+ Y + + S + +S+ V ATDA
Sbjct: 2264 TGAHAEVFVDIIVEDINDNAPVFAQQSYAATLSE-ASVIG---------TSVVQVRATDA 2313
Query: 148 DGDK---VAYKLA 157
D + ++Y+L+
Sbjct: 2314 DSEPNRGISYQLS 2326
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E+ ++++ + A D G+ ++ VTVDV D NDN P+F Q++Y ++ +
Sbjct: 2351 LDYEQSQRHTIFVRAVD-GGMPPLSSDVIVTVDVTDLNDNPPLFEQQIY-------EARI 2402
Query: 127 NSNVSHWKKFSSIGSVSATDADGDKVAYKL 156
+ + H + + + A +D DK+ Y +
Sbjct: 2403 SEHAPHGHFVTCVKAYDADSSDIDKLQYSI 2432
>gi|380790103|gb|AFE66927.1| protocadherin Fat 1 precursor [Macaca mulatta]
Length = 4588
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 122/287 (42%), Gaps = 44/287 (15%)
Query: 23 HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVIT 82
H V Y I GN F + NP + I +T +D E + Y+L+I
Sbjct: 1692 HSQSSVVYEIKDGNTGDAFDI-NPHSGSI------------ITQKALDFETLPVYTLIIQ 1738
Query: 83 ATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
T++ G++ T V+V + DENDNSPVF Q Y ++ + +S+NS V + + +
Sbjct: 1739 GTNMAGLS-TNTTVSVQLQDENDNSPVFMQAEYTGLISE-SASINSVVLTDRNVPLV--I 1794
Query: 143 SATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQ 195
A DAD D + Y + PS I TG + +L+ D + + TV+ HD+
Sbjct: 1795 RAADADKDSNALLVYHIVEPSVHKYFAIDSSTGAIHTVLSLD-YEETSTFHFTVQVHDMG 1853
Query: 196 SPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKR------ 249
+P +A A V + +ID P + + PT +
Sbjct: 1854 TPRLFAEYAANV-------------TIHVIDINDCPPVFAKPLYEASLLLPTYKGVKVIT 1900
Query: 250 IDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
++ ++ D ++++++ + EKF + + +TV +R +
Sbjct: 1901 VNATDADSSAFSQLIYSITEGNIGEKFSMDYKTGALTVQNTTQLRSR 1947
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + HP VRY I G+ + F + + +R T+
Sbjct: 45 ENSAAKTYV-GHPVKMGIYMTHPSWEVRYKIVSGDSENLFKAEEYVLGDFCFLRIRTKGG 103
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A T V V VLD ND P+FS Y
Sbjct: 104 NTAIL------NREVKDHYTLIVKAVEKNTNMEARTKVRVQVLDTNDLRPLFSPTSYSV- 156
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 157 ------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGVIVLT 207
Query: 176 G 176
G
Sbjct: 208 G 208
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 90/199 (45%), Gaps = 32/199 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + YSI GN++ F++ +SK+G + + +
Sbjct: 3246 GTEVLQVYAASRDIEANAEITYSIISGNEHGKFSI------------DSKTGAVFIIE-N 3292
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L I ATD ++ T V V+V D NDN+PVFSQ Y +V + + L
Sbjct: 3293 LDYESSHEYYLTIEATDGGTPSLSDVAT-VNVNVTDVNDNAPVFSQDTYTAVVSE-DAVL 3350
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
S+ +V A DADG + Y + I P GE+ +T +
Sbjct: 3351 E---------QSVITVLADDADGPSNSHIHYSIIDGNQGGPFTIDPVRGEVKVTKLLDRE 3401
Query: 182 DVE-YELTVEAHDLQSPSR 199
+ Y LTV+A D SP R
Sbjct: 3402 TISGYTLTVQASDNGSPPR 3420
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y IT GN FA+ K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1176 YRITSGNPQGFFAV------------HPKTGLITTTSRKLDREQQDEHILEVTVTDNGSP 1223
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRF 117
K+ V V +LDENDN P F QK Y+
Sbjct: 1224 PKSTIARVIVKILDENDNKPQFLQKFYKI 1252
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN F + +P E++ + +DRE ++ Y+L + A+D
Sbjct: 3370 IHYSIIDGNQGGPFTI-DPVRGEVK------------VTKLLDRETISGYTLTVQASDNG 3416
Query: 88 GINKAET-HVTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+PVFS+ Y I+
Sbjct: 3417 SPPRVNTTAVNIDVSDVNDNAPVFSRGNYSVII 3449
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 105/250 (42%), Gaps = 36/250 (14%)
Query: 50 EIRNSTESKSGV----------LLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVT 97
EIR S SGV ++ TS +DRE + Y L + ATD +G+ + +
Sbjct: 1068 EIRYSIRDGSGVGVFKIGEETGIIETSDRLDRESTSHYWLTVFATD-QGVVPLSSFIEIY 1126
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAY 154
++V D NDN+P S+ VY + + + K S+ + A D D DK+ Y
Sbjct: 1127 IEVEDVNDNAPQTSEPVYYPEI----------LENSPKDVSVVQIEAFDPDLSSNDKLVY 1176
Query: 155 KLAV--PSNLVVIVPQTGELLLTG---DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL 209
++ P + P+TG + T D D E+ L V D SP + A+V +
Sbjct: 1177 RITSGNPQGFFAVHPKTGLITTTSRKLDREQQD-EHILEVTVTDNGSPPK--STIARVIV 1233
Query: 210 QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVR-PTKRIDFSETDGEMEGRIVFALE 268
+ Q LQ K P R + R A R P R+ ++ D I +++E
Sbjct: 1234 KILDENDNKPQFLQKF-YKIRLPEREKPDRERNARREPLYRVIATDKDEGPNAEISYSIE 1292
Query: 269 KETEREKFKI 278
+ E KF I
Sbjct: 1293 EGNEHGKFFI 1302
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 78/173 (45%), Gaps = 32/173 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N I+N + + +DRE+ Y L ITATD
Sbjct: 2954 VTYFITGGDPLGQFAVEN-----IQNEWK------VYVKKPLDREKRDNYLLTITATD-- 3000
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G ++ V V VLD NDNSPV + +Y ++ +V K I +SA DA
Sbjct: 3001 GTFSSKAIVEVKVLDANDNSPVCEKTLY-------SDTIPEDVLPGKL---IMQISAADA 3050
Query: 148 D---GDKVAYKLA-VPSNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHD 193
D ++ Y L+ + + P TGEL + P D E Y L V A D
Sbjct: 3051 DIRSNAEITYTLSGSGAEKFQLNPDTGELKTSA--PLDREEQAVYHLLVRATD 3101
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 122/306 (39%), Gaps = 61/306 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y+++ G+ F L NP T E++ TS +DREE A Y L++ ATD +
Sbjct: 3058 ITYTLS-GSGAEKFQL-NPDTGELK------------TSAPLDREEQAVYHLLVRATD-R 3102
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G + + + + D NDN+P FS Y V + + + + V ATDA
Sbjct: 3103 GGRFCQASIVLTLEDVNDNAPEFSADPYAITV----------FENTEPGTLLTRVQATDA 3152
Query: 148 DGD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE--YELTVEAHDLQSPSRYAR 202
D K+ Y L ++ + + ++ P +++ Y L+++A D P R
Sbjct: 3153 DSGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRRLTA 3212
Query: 203 EPAQVW----LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGE 258
V + N PV + + + E +V A R D E
Sbjct: 3213 TGTVVVSVLDINDNPPVFEYREYGATVSEDILV--GTEVLQVYAASR----------DIE 3260
Query: 259 MEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEELGPEKTIDFWVTINN 318
I +++ E KF I + + + EN D E + ++++TI
Sbjct: 3261 ANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDY-------------ESSHEYYLTI-- 3305
Query: 319 QATNGG 324
+AT+GG
Sbjct: 3306 EATDGG 3311
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 26/133 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSIT G+ F + T GV+ V + +D E Y L I ATD
Sbjct: 2214 VFYSITDGDPFSQFTINFNT------------GVINVIA-PLDFEAHPAYKLSIRATDSL 2260
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
AE V + V D NDN+PVF+Q+ Y + + S + +S+ V ATD+
Sbjct: 2261 TGAHAEVFVDIIVEDINDNAPVFAQQSYAATLSE-ASVIG---------TSVVQVRATDS 2310
Query: 148 DGDK---VAYKLA 157
D + ++Y+L+
Sbjct: 2311 DSEPNRGISYQLS 2323
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E+ ++++ + A D G+ ++ VTVDV D NDN P+F Q++Y ++ +
Sbjct: 2348 LDYEQSQRHTIFVRAVD-GGMPPLSSDVIVTVDVTDLNDNPPLFEQQIY-------EARI 2399
Query: 127 NSNVSHWKKFSSIGSVSATDADGDKVAYKL 156
+ + H + + + A +D DK+ Y +
Sbjct: 2400 SEHAPHGHFVTCVKAYDADSSDIDKLQYSI 2429
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 125/288 (43%), Gaps = 62/288 (21%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GN++ F + + ++G+L + S +DRE +Y+L IT D+
Sbjct: 754 YAISGGNEDSCFMI------------DMETGMLKILS-PLDRETTDKYTLNITVYDLGIP 800
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
KA + V V+D NDN P F Q+ Y V + K + S I V ATD D
Sbjct: 801 QKAAWRLLDVVVVDANDNPPEFLQESYFVEVSEDK----------EVHSEIIQVEATDKD 850
Query: 149 ---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYE--LTVEAHDLQSPSRYARE 203
V Y + ++ I TG + + P ++++E L +EA D ARE
Sbjct: 851 LGPNGHVTYSILTDTDKFSIDSATGVVKIM-HPLDRELQHEHYLKIEARD------QARE 903
Query: 204 PAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRI 263
Q+ F++ VL+ + + D P + + P R+ E EG +
Sbjct: 904 EPQL---FSTVVLK----VSLEDVNDNPP---------KFIPPNYRVKVRE--DLPEGTV 945
Query: 264 VFALE------KETEREKFKIRDENPW-ITVDE-NGDVRVKKRWDFEE 303
+ LE ++ + ++ + D VD+ +G VR+ ++ DFE+
Sbjct: 946 IMWLEAHDPDLAQSGQVRYSLMDHGEGNFDVDKLSGAVRIVQQLDFEK 993
>gi|195470324|ref|XP_002087458.1| GE15963 [Drosophila yakuba]
gi|194173559|gb|EDW87170.1| GE15963 [Drosophila yakuba]
Length = 3556
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 69 IDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE +Y L++ ATD A+T V V VLD NDN P F + Y F + +
Sbjct: 1111 LDRETRDRYQLMVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEE------ 1164
Query: 128 SNVSHWKKFSSIGSVSATDAD-GDKVA--YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE 184
+ ++ S +G V+A+D D G+ A Y L ++ + P TGE + T +P ++
Sbjct: 1165 ----NLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGE-ISTREPLDRELR 1219
Query: 185 --YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRR 239
Y+L VEA D +P R AR P ++ + N+P + D Q ++ + E P E R
Sbjct: 1220 ELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQ-EDVVSVREEQPPGTEVVR 1278
Query: 240 VTRAV 244
V RAV
Sbjct: 1279 V-RAV 1282
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 62/133 (46%), Gaps = 25/133 (18%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL---LVTSGDIDREEVAQYSLV 80
P+ RY+I GN N F L +S + GVL L SG +DRE YSL+
Sbjct: 205 PYNTQRYNIVSGNVNDAFRL---------SSHRERDGVLYLDLQISGFLDRETTPGYSLL 255
Query: 81 ITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS 138
I A D G +TV++ D NDN P+F+Q Y V + N+ V +S
Sbjct: 256 IEALD-GGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPE-----NATVG-----TS 304
Query: 139 IGSVSATDADGDK 151
+ V A+D D D+
Sbjct: 305 VLQVYASDTDADE 317
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 98/227 (43%), Gaps = 46/227 (20%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG--INKAE 93
N ++L N T + + +S+SG L+ T G +DRE A Y+ ++ A D + A
Sbjct: 1984 NARLVYSLANETQWQF--AIDSQSG-LITTVGKLDRELQASYNFMVLAMDGGRYEVRSAT 2040
Query: 94 THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GD 150
V ++VLD NDN PVF + Y +G + + + + K V A DAD
Sbjct: 2041 VPVQINVLDINDNRPVFERYPY---IGQVPALIQPGQTLLK-------VQALDADLGANA 2090
Query: 151 KVAYKLAVPSNLVV----IVPQTGEL------------LL--------TGDPPSDDVEY- 185
++ Y L ++ V I P TG L LL G PP +
Sbjct: 2091 EIVYSLNAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVIARDKGTPPQSSLGLI 2150
Query: 186 ELTVEAHDLQSPS-RYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEA 231
EL + +P R+ E +V L+ NSP +LLQ++ +S+
Sbjct: 2151 ELLIGEAPQGTPVLRFQNETYRVMLKENSP--SGTRLLQVVALRSDG 2195
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 55/118 (46%), Gaps = 19/118 (16%)
Query: 12 GLPILVASSH---KHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G P+ A +H V YS+ + FA+ + H L+ S
Sbjct: 947 GAPLYAAHAHDKDSGSSGQVSYSLVGDSGKRLFAIDARSGH-------------LILSQH 993
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVT--VDVLDENDNSPVFSQKVYRFIVGDLKS 124
+D E ++SL++TATD G+ T++T VDV D NDN PVF ++ Y V + +S
Sbjct: 994 LDYESSQRHSLIVTATD-GGVPSLSTNLTILVDVQDVNDNPPVFEKEEYSVNVSESRS 1050
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 64/116 (55%), Gaps = 13/116 (11%)
Query: 63 LVTSGDI-DREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVTS + D E+ +Y + + A+D+ G KA V V++ ++ +P F+++ YRF+
Sbjct: 2922 LVTSAFVFDYEQRQRYDMELLASDMGG-KKAGVAVRVEIESRDEFTPQFTERTYRFV--- 2977
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGELLL 174
L + V+ + + +G V+ATD+D +V Y+L+ P + + +G +L+
Sbjct: 2978 ----LPAAVALPQGY-VVGQVTATDSDSGPDGRVVYQLSAPHSHFKVNRSSGAVLI 3028
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 79/190 (41%), Gaps = 42/190 (22%)
Query: 20 SHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSL 79
+H+ P VRYSI G+ + F S E+ SG + + +D E +Q L
Sbjct: 857 AHRSP---VRYSIYSGDPDGYF------------SIETNSGNIRIAK-PLDHEAKSQVLL 900
Query: 80 VITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV---GDLKSSLNSNVSHWKKF 136
I AT + T V ++V D NDN+P F + R V +L + L + +H K
Sbjct: 901 NIQATLGEPPVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDS 960
Query: 137 SSIGSVSATDADGDKVAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVEYE------LT 188
S G VS Y L S L I ++G L+L S ++YE L
Sbjct: 961 GSSGQVS----------YSLVGDSGKRLFAIDARSGHLIL-----SQHLDYESSQRHSLI 1005
Query: 189 VEAHDLQSPS 198
V A D PS
Sbjct: 1006 VTATDGGVPS 1015
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 73/156 (46%), Gaps = 27/156 (17%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V Y+I +G K+ T E+R S SG + + +G++D E + Y + ATD
Sbjct: 645 MVNYTIGEG-------FKHLTEFEVR----SASGEICI-AGELDFERRSSYEFPVLATDR 692
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS--IGSVSA 144
G++ + + + D NDN PVF + Y K SL + + SS I +V A
Sbjct: 693 GGLSTTAM-IKMQLTDVNDNRPVFYPREY-------KVSLRESPKAPTQASSTPIVAVVA 744
Query: 145 TDADG---DKVAYKLAV--PSNLVVIVPQTGELLLT 175
TD D +V+Y++ + + I TGE+ +
Sbjct: 745 TDPDSGNFGQVSYRIVAGNEAGIFRIDRSTGEIFVA 780
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 23/118 (19%)
Query: 2 ENSKSGTGVKGLPILVASS-HKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
ENS+ G + +VAS + P+ + YSIT GN + F S +S SG
Sbjct: 1859 ENSEPGV----IHTVVASDLDEGPNADLIYSITGGNLGNKF------------SIDSSSG 1902
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKA---ETHVTVDVLDENDNSPVFSQKVY 115
L ++ +DRE+ ++Y+L I A+D +G K+ ++T+ V D+NDN+P F Y
Sbjct: 1903 EL--SARPLDREQHSRYTLQIQASD-RGQPKSRQGHCNITIFVEDQNDNAPRFKLSKY 1957
>gi|4887715|gb|AAA79329.2| adherin [Drosophila melanogaster]
Length = 3503
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 92/185 (49%), Gaps = 22/185 (11%)
Query: 69 IDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE +Y L I ATD A+T V V VLD NDN P F + Y F + +
Sbjct: 1058 LDRETRDRYQLTILATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEE------ 1111
Query: 128 SNVSHWKKFSSIGSVSATDAD-GDKVA--YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE 184
+ ++ S +G V+A+D D G+ A Y L ++ + P TGE + T +P ++
Sbjct: 1112 ----NLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGE-ISTREPLDRELR 1166
Query: 185 --YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRR 239
Y+L VEA D +P R AR P ++ + N+P + D Q ++ + E P E R
Sbjct: 1167 ELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQ-EDVVSVREEQPPGTEVVR 1225
Query: 240 VTRAV 244
V RAV
Sbjct: 1226 V-RAV 1229
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 62/133 (46%), Gaps = 25/133 (18%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL---LVTSGDIDREEVAQYSLV 80
P+ RY+I GN N F L +S + GVL L SG +DRE YSL+
Sbjct: 152 PYNTQRYNIVSGNVNDAFRL---------SSHRERDGVLYLDLQISGFLDRETTPGYSLL 202
Query: 81 ITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS 138
I A D G +TV++ D NDN P+F+Q Y V + N+ V +S
Sbjct: 203 IEALD-GGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPE-----NATVG-----TS 251
Query: 139 IGSVSATDADGDK 151
+ V A+D D D+
Sbjct: 252 VLQVYASDTDADE 264
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 46/227 (20%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG--INKAE 93
N ++L N T + + + +SG L+ T G +DRE A Y+ ++ ATD + A
Sbjct: 1931 NARLVYSLANETQWQF--AIDGQSG-LITTVGKLDRELQASYNFMVLATDGGRYEVRSAT 1987
Query: 94 THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GD 150
V ++VLD NDN P+F + Y +G + + + + K V A DAD
Sbjct: 1988 VPVQINVLDINDNRPIFERYPY---IGQVPALIQPGQTLLK-------VQAIDADLGANA 2037
Query: 151 KVAYKLAVPSNLVV----IVPQTGEL------------LL--------TGDPPSDDVEY- 185
++ Y L ++ V I P TG L LL G+PP +
Sbjct: 2038 EIVYSLNAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVVARDKGNPPQSSLGLI 2097
Query: 186 ELTVEAHDLQSPS-RYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEA 231
EL + +P R+ E +V L+ NSP +LLQ++ +S+
Sbjct: 2098 ELLIGEAPQGTPVLRFQNETYRVMLKENSP--SGTRLLQVVALRSDG 2142
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 69/123 (56%), Gaps = 15/123 (12%)
Query: 56 ESKSGVLLVTSGDI-DREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKV 114
+S+SG LVTS + D E+ +Y + + A+D+ G KA V V++ ++ +P F+++
Sbjct: 2864 DSESG--LVTSAFVFDYEQRQRYDMELLASDMGG-KKASVAVRVEIESRDEFTPQFTERT 2920
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGE 171
YRF+ L + V+ + + +G V+ATD+D +V Y+L+ P + + +G
Sbjct: 2921 YRFV-------LPAAVALPQGY-VVGQVTATDSDSGPDGRVVYQLSAPHSHFKVNRSSGA 2972
Query: 172 LLL 174
+L+
Sbjct: 2973 VLI 2975
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 51/216 (23%)
Query: 12 GLPILVASSH---KHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G P+ A +H V YS+ + + FA+ + H L+ S
Sbjct: 894 GAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFAIDARSGH-------------LILSQH 940
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVT--VDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +++L++TATD G+ T++T VDV D NDN PVF + Y
Sbjct: 941 LDYESSQRHTLIVTATD-GGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSV--------- 990
Query: 127 NSNVSHWKKFSS-IGSVSATDAD---GDKVAYKL----------AVPSNLVV----IVPQ 168
NVS + ++ I V+A+D D ++ Y++ ++ S+ V I P
Sbjct: 991 --NVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPN 1048
Query: 169 TGELLLTG--DPPSDDVEYELTVEAHDLQSPSRYAR 202
+G + L D + D Y+LT+ A D +P+ +A+
Sbjct: 1049 SGWIYLRAPLDRETRD-RYQLTILATDNGTPAAHAK 1083
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 36/163 (22%)
Query: 2 ENSKSGTGVKGLPILVASS-HKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
ENS+ G + +VAS + P+ + YSIT GN + F S +S SG
Sbjct: 1806 ENSEPGV----IHTVVASDLDEGPNADLIYSITGGNLGNKF------------SIDSSSG 1849
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKA---ETHVTVDVLDENDNSPVFSQKVYRF 117
L ++ +DRE+ ++Y+L I A+D +G K+ ++T+ V D+NDN+P RF
Sbjct: 1850 EL--SARPLDREQHSRYTLQIQASD-RGQPKSRQGHCNITIFVEDQNDNAP-------RF 1899
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA 157
+ S+ + +S+ +SA DAD ++ Y LA
Sbjct: 1900 KLSKYTGSVQEDAPLG---TSVVQISAVDADLGVNARLVYSLA 1939
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 23/153 (15%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V Y+I +G K+ T E+R S SG + + +G++D E + Y + ATD
Sbjct: 592 MVNYTIGEG-------FKHLTEFEVR----SASGEICI-AGELDFERRSSYEFPVLATDR 639
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
G++ + + + D NDN PVF + Y+ L+ S S + I +V ATD
Sbjct: 640 GGLSTTAM-IKMQLTDVNDNRPVFYPREYKV---SLRES--PKASSQASSTPIVAVVATD 693
Query: 147 AD-GD--KVAYKLAV--PSNLVVIVPQTGELLL 174
D G+ +V+Y++ + + I TGE+ +
Sbjct: 694 PDYGNFGQVSYRIVAGNEAGIFRIDRSTGEIFV 726
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 79/190 (41%), Gaps = 42/190 (22%)
Query: 20 SHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSL 79
+H+ P VRYSI G+ + F S E+ SG + + +D E +Q L
Sbjct: 804 AHRSP---VRYSIYSGDPDGYF------------SIETNSGNIRIAK-PLDHEAKSQVLL 847
Query: 80 VITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV---GDLKSSLNSNVSHWKKF 136
I AT + T V ++V D NDN+P F + R V +L + L + +H K
Sbjct: 848 NIQATLGEPPVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDS 907
Query: 137 SSIGSVSATDADGDKVAYKLAVPS--NLVVIVPQTGELLLTGDPPSDDVEYE------LT 188
S G +V Y L S L I ++G L+L S ++YE L
Sbjct: 908 GSSG----------QVTYSLVKESGKGLFAIDARSGHLIL-----SQHLDYESSQRHTLI 952
Query: 189 VEAHDLQSPS 198
V A D PS
Sbjct: 953 VTATDGGVPS 962
>gi|13929168|ref|NP_114007.1| protocadherin Fat 1 precursor [Rattus norvegicus]
gi|4426629|gb|AAD20459.1| protocadherin [Rattus norvegicus]
Length = 4589
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 122/294 (41%), Gaps = 44/294 (14%)
Query: 16 LVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVA 75
V H V Y + GN F + NP + I VT +D E +
Sbjct: 1686 FVGMVSAHSQSSVMYEVKDGNIGDAFNI-NPHSGSI------------VTQRALDFETLP 1732
Query: 76 QYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK 135
Y+L + T++ G++ T V V + DENDN P F++ Y + + +S+NS V K
Sbjct: 1733 IYTLTVQGTNMAGLS-TNTTVVVHIQDENDNPPAFTRAEYSGFISE-SASVNSVVLTDKN 1790
Query: 136 FSSIGSVSATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELT 188
+ + ATDAD + + Y++ PS N I P TG + +L+ D V + T
Sbjct: 1791 VPLV--IRATDADRESNALLVYQIVEPSVHNYFAIDPTTGAIHTVLSLDYEETRV-FHFT 1847
Query: 189 VEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTK 248
V+ HD+ +P +A A V + +ID P + + PT
Sbjct: 1848 VQVHDMGTPRLFAEYAANV-------------TVHVIDINDCPPVFSKSLYEASLLLPTY 1894
Query: 249 R------IDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
+ ++ ++ D ++++++ K EKF + + I + +R +
Sbjct: 1895 KGVNVITVNATDADSRAFSQLIYSITKGNIGEKFSMDHKTGTIAIQNTTQLRSR 1948
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 32/199 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + Y+I GN++ F++ +SK+G + + +
Sbjct: 3247 GTEVLQVYAASRDIEANAEITYAIISGNEHGKFSI------------DSKTGAIFIIE-N 3293
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E Y L + ATD ++ T V +++ D NDNSPVFSQ Y +V + ++L
Sbjct: 3294 LDYESSHGYYLTVEATDGGTPSLSDVAT-VNINITDINDNSPVFSQDSYTTVVSE-DAAL 3351
Query: 127 NSNVSHWKKFSSIGSVSATDADGDKVAYKL-----AVPSNLVVIVPQTGELLLTGDPPSD 181
V ++ A DADG ++ L + I P GE+ +T +
Sbjct: 3352 EQPVI---------TIMADDADGPSNSHILYSIIEGNQGSPFTIDPVRGEIKVTKPLDRE 3402
Query: 182 DVE-YELTVEAHDLQSPSR 199
+ Y LTV+A D +P R
Sbjct: 3403 TISGYTLTVQAADNGNPPR 3421
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 46/92 (50%), Gaps = 15/92 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1175 LTYRITSGNPQGFFSI------------HPKTGLITTTSRKLDREQQDEHILEVTVTD-N 1221
Query: 88 GINKAET--HVTVDVLDENDNSPVFSQKVYRF 117
G+ T V V +LDENDN P F QK Y+
Sbjct: 1222 GVPPRSTIARVIVKILDENDNRPQFLQKFYKI 1253
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P + P +RY I G++ + F + + +R T+
Sbjct: 46 ENSAAKTYV-GHPRKMGIYILDPSWEIRYKIISGDNENLFKAEEYVLGDFCFLRIRTKGG 104
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+LVI A + +A V V VLD ND P+FS Y
Sbjct: 105 NTAIL------NREVRDHYTLVIKAVEKVTDAEARAKVRVQVLDTNDLRPLFSPTSYSV- 157
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 158 ------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGVVVLT 208
Query: 176 G 176
G
Sbjct: 209 G 209
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI +GN F + +P EI+ + +DRE ++ Y+L + A D
Sbjct: 3371 ILYSIIEGNQGSPFTI-DPVRGEIK------------VTKPLDRETISGYTLTVQAADNG 3417
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+P+FS+ Y I+
Sbjct: 3418 NPPRVNTTTVNIDVSDVNDNAPLFSRDNYSVII 3450
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 100/238 (42%), Gaps = 33/238 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD--LKSSL 126
+DRE+ Y L +TATD G ++ V V VLD NDNSPV + Y + + L L
Sbjct: 2985 LDREQKDSYLLTVTATD--GTFSSKARVEVKVLDANDNSPVCERTAYSDAIPEDALPGKL 3042
Query: 127 NSNVSHWKKFSSIGSVSATDAD---GDKVAYKL-AVPSNLVVIVPQTGEL-LLTGDPPSD 181
+ VSATDAD ++ Y L + + P TGEL L +
Sbjct: 3043 ------------VMQVSATDADIRSNAEITYTLFGSGAEKFKLNPDTGELRTLALLDREE 3090
Query: 182 DVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVT 241
Y L V+A D S A + VL E + + P+ I T
Sbjct: 3091 QAVYHLLVKATDGGGRSCQA-----------TIVLTLEDVNDNTPEFTADPYAITVFENT 3139
Query: 242 RAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
P R+ ++ D + +I ++L ++ +F I +++ + ++++ D ++ +
Sbjct: 3140 EPGTPLTRVQATDADAGLNRKISYSL-LDSADGQFSINEQSGILQLEKHLDRELQAVY 3196
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 14/87 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GND+ F + + ++G+L V S +DRE +Y+L IT D+
Sbjct: 755 YAISGGNDDSCFTV------------DMETGMLKVLS-PLDREVTDKYTLNITVYDLGIP 801
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVY 115
+A + V VLD NDN+P F Q+ Y
Sbjct: 802 QRAAWRLLDVTVLDANDNAPEFLQESY 828
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 107/252 (42%), Gaps = 40/252 (15%)
Query: 50 EIRNSTESKSGV----------LLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVT 97
EIR S SGV ++ TS +DRE + Y L + ATD +G+ + V
Sbjct: 1069 EIRYSIRDGSGVGVFRIDEETGVIETSDRLDRESTSHYWLTVYATD-QGVVPLSSFIEVY 1127
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAY 154
++V D NDN+P S+ VY + + + K S+ + A D D DK+ Y
Sbjct: 1128 IEVEDVNDNAPQTSEPVYYPEI----------MENSPKDVSVVQIEAFDPDSSSSDKLTY 1177
Query: 155 KLAV--PSNLVVIVPQTGELLLTGDP----PSDDVEYELTVEAHDLQSPSRYAREPAQVW 208
++ P I P+TG + T D+ E+TV + + S AR ++
Sbjct: 1178 RITSGNPQGFFSIHPKTGLITTTSRKLDREQQDEHILEVTVTDNGVPPRSTIARVIVKIL 1237
Query: 209 LQF-NSP-VLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFA 266
+ N P LQ +++ +R+ R KR P R+ ++ D + ++
Sbjct: 1238 DENDNRPQFLQKFYKIRLPEREKADGDRSAKR------EPLYRVIAADKDEGPNAELSYS 1291
Query: 267 LEKETEREKFKI 278
+E+ E +F I
Sbjct: 1292 IEEGNEHGRFSI 1303
>gi|189069234|dbj|BAG36266.1| unnamed protein product [Homo sapiens]
Length = 794
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 86/185 (46%), Gaps = 28/185 (15%)
Query: 30 YSITQGNDNHT----FALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
+S++ + H +++N +R S E+ LVT G +DRE A+Y++ IT TD
Sbjct: 366 FSVSDADSGHNQQVICSIENNLPFLLRPSVENF--YTLVTEGALDRESRAEYNITITVTD 423
Query: 86 VKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+ K + +TV V D NDN+P F+Q Y V + NS H IGSVSA
Sbjct: 424 LGTPRLKTQQSITVQVSDVNDNAPAFTQTSYTLFVRE----NNSPALH------IGSVSA 473
Query: 145 TDADGD---KVAYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
TD D +V Y L P S+LV I G L + ++ +E V A D
Sbjct: 474 TDRDSGINAQVTYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATD 533
Query: 194 LQSPS 198
SP+
Sbjct: 534 RGSPA 538
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 12/91 (13%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
L RY+I+ NP H + RN +E + LV +DREE Q L + A D
Sbjct: 166 LQRYTIS----------SNPHFHVLTRNRSEGRKFPELVLDKPLDREEQPQLRLTLIALD 215
Query: 86 VKGINKAET-HVTVDVLDENDNSPVFSQKVY 115
++ T + + VLD NDN P F+Q++Y
Sbjct: 216 GGSPPRSGTSEIQIQVLDINDNVPEFAQELY 246
>gi|355687770|gb|EHH26354.1| hypothetical protein EGK_16302 [Macaca mulatta]
Length = 4591
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 122/287 (42%), Gaps = 44/287 (15%)
Query: 23 HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVIT 82
H V Y I GN F + NP + I +T +D E + Y+L+I
Sbjct: 1695 HSQSSVVYEIKDGNTGDAFDI-NPHSGSI------------ITQKALDFETLPVYTLIIQ 1741
Query: 83 ATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
T++ G++ T V+V + DENDNSPVF Q Y ++ + +S+NS V + + +
Sbjct: 1742 GTNMAGLS-TNTTVSVQLQDENDNSPVFMQAEYTGLISE-SASINSVVLTDRNVPLV--I 1797
Query: 143 SATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQ 195
A DAD D + Y + PS I TG + +L+ D + + TV+ HD+
Sbjct: 1798 RAADADKDSNALLVYHIVEPSVHKYFAIDSSTGAIHTVLSLD-YEETSTFHFTVQVHDMG 1856
Query: 196 SPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKR------ 249
+P +A A V + +ID P + + PT +
Sbjct: 1857 TPRLFAEYAANV-------------TIHVIDINDCPPVFAKPLYEASLLLPTYKGVKVIT 1903
Query: 250 IDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
++ ++ D ++++++ + EKF + + +TV +R +
Sbjct: 1904 VNATDADSSAFSQLIYSITEGNIGEKFSMDYKTGALTVQNTTQLRSR 1950
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + HP VRY I G+ + F + + +R T+
Sbjct: 45 ENSAAKTYV-GHPVKMGIYMTHPSWEVRYKIVSGDSENLFKAEEYVLGDFCFLRIRTKGG 103
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A T V V VLD ND P+FS Y
Sbjct: 104 NTAIL------NREVKDHYTLIVKAVEKNTNMEARTKVRVQVLDTNDLRPLFSPTSYSV- 156
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 157 ------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGVIVLT 207
Query: 176 G 176
G
Sbjct: 208 G 208
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 90/199 (45%), Gaps = 32/199 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + YSI GN++ F++ +SK+G + + +
Sbjct: 3249 GTEVLQVYAASRDIEANAEITYSIISGNEHGKFSI------------DSKTGAVFIIE-N 3295
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L I ATD ++ T V V+V D NDN+PVFSQ Y +V + + L
Sbjct: 3296 LDYESSHEYYLTIEATDGGTPSLSDVAT-VNVNVTDVNDNAPVFSQDTYTAVVSE-DAVL 3353
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
S+ +V A DADG + Y + I P GE+ +T +
Sbjct: 3354 E---------QSVITVLADDADGPSNSHIHYSIIDGNQGGPFTIDPVRGEVKVTKLLDRE 3404
Query: 182 DVE-YELTVEAHDLQSPSR 199
+ Y LTV+A D SP R
Sbjct: 3405 TISGYTLTVQASDNGSPPR 3423
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y IT GN FA+ K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1176 YRITSGNPQGFFAV------------HPKTGLITTTSRKLDREQQDEHILEVTVTDNGSP 1223
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRF 117
K+ V V +LDENDN P F QK Y+
Sbjct: 1224 PKSTIARVIVKILDENDNKPQFLQKFYKI 1252
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN F + +P E++ + +DRE ++ Y+L + A+D
Sbjct: 3373 IHYSIIDGNQGGPFTI-DPVRGEVK------------VTKLLDRETISGYTLTVQASDNG 3419
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+PVFS+ Y I+
Sbjct: 3420 SPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVII 3452
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 105/250 (42%), Gaps = 36/250 (14%)
Query: 50 EIRNSTESKSGV----------LLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVT 97
EIR S SGV ++ TS +DRE + Y L + ATD +G+ + +
Sbjct: 1068 EIRYSIRDGSGVGVFKIGEETGIIETSDRLDRESTSHYWLTVFATD-QGVVPLSSFIEIY 1126
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAY 154
++V D NDN+P S+ VY + + + K S+ + A D D DK+ Y
Sbjct: 1127 IEVEDVNDNAPQTSEPVYYPEI----------LENSPKDVSVVQIEAFDPDLSSNDKLVY 1176
Query: 155 KLAV--PSNLVVIVPQTGELLLTG---DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL 209
++ P + P+TG + T D D E+ L V D SP + A+V +
Sbjct: 1177 RITSGNPQGFFAVHPKTGLITTTSRKLDREQQD-EHILEVTVTDNGSPPK--STIARVIV 1233
Query: 210 QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVR-PTKRIDFSETDGEMEGRIVFALE 268
+ Q LQ K P R + R A R P R+ ++ D I +++E
Sbjct: 1234 KILDENDNKPQFLQKF-YKIRLPEREKPDRERNARREPLYRVIATDKDEGPNAEISYSIE 1292
Query: 269 KETEREKFKI 278
+ E KF I
Sbjct: 1293 EGNEHGKFFI 1302
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 78/173 (45%), Gaps = 32/173 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N I+N + + +DRE+ Y L ITATD
Sbjct: 2957 VTYFITGGDPLGQFAVEN-----IQNEWK------VYVKKPLDREKRDNYLLTITATD-- 3003
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G ++ V V VLD NDNSPV + +Y ++ +V K I +SA DA
Sbjct: 3004 GTFSSKAIVEVKVLDANDNSPVCEKTLY-------SDTIPEDVLPGKL---IMQISAADA 3053
Query: 148 D---GDKVAYKLA-VPSNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHD 193
D ++ Y L+ + + P TGEL + P D E Y L V A D
Sbjct: 3054 DIRSNAEITYTLSGSGAEKFQLNPDTGELKTSA--PLDREEQAVYHLLVRATD 3104
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 122/306 (39%), Gaps = 61/306 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y+++ G+ F L NP T E++ TS +DREE A Y L++ ATD +
Sbjct: 3061 ITYTLS-GSGAEKFQL-NPDTGELK------------TSAPLDREEQAVYHLLVRATD-R 3105
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G + + + + D NDN+P FS Y V + + + + V ATDA
Sbjct: 3106 GGRFCQASIVLTLEDVNDNAPEFSADPYAITV----------FENTEPGTLLTRVQATDA 3155
Query: 148 DGD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE--YELTVEAHDLQSPSRYAR 202
D K+ Y L ++ + + ++ P +++ Y L+++A D P R
Sbjct: 3156 DSGLNRKILYSLIDSADGQFSINELSGIIQLEKPLDRELQAVYTLSLKAVDQGLPRRLTA 3215
Query: 203 EPAQVW----LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGE 258
V + N PV + + + E +V A R D E
Sbjct: 3216 TGTVVVSVLDINDNPPVFEYREYGATVSEDILV--GTEVLQVYAASR----------DIE 3263
Query: 259 MEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEELGPEKTIDFWVTINN 318
I +++ E KF I + + + EN D E + ++++TI
Sbjct: 3264 ANAEITYSIISGNEHGKFSIDSKTGAVFIIENLDY-------------ESSHEYYLTI-- 3308
Query: 319 QATNGG 324
+AT+GG
Sbjct: 3309 EATDGG 3314
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E+ ++++ + A D G+ ++ VTVDV D NDN P+F Q++Y ++ +
Sbjct: 2351 LDYEQSQRHTIFVRAVD-GGMPPLSSDVIVTVDVTDLNDNPPLFEQQIY-------EARI 2402
Query: 127 NSNVSHWKKFSSIGSVSATDADGDKVAYKL 156
+ + H + + + A +D DK+ Y +
Sbjct: 2403 SEHAPHGHFVTCVKAYDADSSDIDKLQYSI 2432
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 125/288 (43%), Gaps = 62/288 (21%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GN++ F + + ++G+L + S +DRE +Y+L IT D+
Sbjct: 754 YAISGGNEDSCFMI------------DMETGMLKILS-PLDRETTDKYTLNITVYDLGIP 800
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
KA + V V+D NDN P F Q+ Y V + K + S I V ATD D
Sbjct: 801 QKAAWRLLDVVVVDANDNPPEFLQESYFVEVSEDK----------EVHSEIIQVEATDKD 850
Query: 149 ---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYE--LTVEAHDLQSPSRYARE 203
V Y + ++ I TG + + P ++++E L +EA D ARE
Sbjct: 851 LGPNGHVTYSILTDTDKFSIDSATGVVKIM-HPLDRELQHEHYLKIEARD------QARE 903
Query: 204 PAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRI 263
Q+ F++ VL+ + + D P + + P R+ E EG +
Sbjct: 904 EPQL---FSTVVLK----VSLEDVNDNPP---------KFIPPNYRVKVRE--DLPEGTV 945
Query: 264 VFALE------KETEREKFKIRDENPW-ITVDE-NGDVRVKKRWDFEE 303
+ LE ++ + ++ + D VD+ +G VR+ ++ DFE+
Sbjct: 946 IMWLEAHDPDLAQSGQVRYSLMDHGEGNFDVDKLSGAVRIVQQLDFEK 993
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 13/88 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSIT G+ F + T GV+ V + +D E Y L I ATD
Sbjct: 2217 VFYSITDGDPFSQFTINFNT------------GVINVIA-PLDFEAHPAYKLNIRATDSL 2263
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVY 115
AE V + V D NDN+PVF+Q+ Y
Sbjct: 2264 TGAHAEVFVDIIVEDINDNAPVFAQQSY 2291
>gi|322778929|gb|EFZ09345.1| hypothetical protein SINV_80025 [Solenopsis invicta]
Length = 2727
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 79/155 (50%), Gaps = 30/155 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD-IDREEVAQYSLVITATDV 86
+RY+ +G + FA+ ++++G++ V G +DRE AQ L ITA D
Sbjct: 243 IRYTGIEGIGSDAFAI------------DAETGLITVAMGSSLDREMAAQLQLTITARDE 290
Query: 87 KGI-NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G N + V++LD NDN+P+F + Y F +LNS++++ FS+ + AT
Sbjct: 291 NGKGNMGTVPLIVNLLDVNDNAPIFEKDTYEF-------ALNSDLTN---FSTPAIIKAT 340
Query: 146 DADGD----KVAYKL--AVPSNLVVIVPQTGELLL 174
DAD + ++ Y+L N + TGEL+L
Sbjct: 341 DADAEPPNNEIRYELIHGNYENKFYLDEITGELIL 375
>gi|332234725|ref|XP_003266555.1| PREDICTED: protocadherin beta-17-like [Nomascus leucogenys]
Length = 796
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+T G +DRE A+Y+ IT TD+ K E ++TV V D NDN+PVF+Q Y V +
Sbjct: 404 LLTEGALDRESRAEYNFTITVTDLGTPRLKTEYNITVRVSDVNDNAPVFTQTSYTLFVRE 463
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 464 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGH 513
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 514 LFALRSLDYEALQAFEFRVGATDRGSPA 541
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 28/173 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
YSI+ + H F RN ++ K LV +DREE Q L +TA D
Sbjct: 171 YSISTNSYFHLFT---------RNHSDGKKYPELVLDQALDREEQPQLRLTLTALDGGSP 221
Query: 90 NKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ T V + ++D NDN P F+Q+ Y V + N+ + S + +VSA D D
Sbjct: 222 PRTGTSQVVIVIVDINDNVPEFAQRRYEVQVPE-----NTPIG-----SLVITVSARDLD 271
Query: 149 G---DKVAYKLAVPSNLVV----IVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
+++Y SN ++ I TGE+ L ++++ Y + VEA D
Sbjct: 272 AGTHGELSYSFFQYSNQIIQAFEINSITGEIRLKKALDFEEIQSYHMEVEASD 324
>gi|260802290|ref|XP_002596025.1| hypothetical protein BRAFLDRAFT_84111 [Branchiostoma floridae]
gi|229281279|gb|EEN52037.1| hypothetical protein BRAFLDRAFT_84111 [Branchiostoma floridae]
Length = 3422
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 112/270 (41%), Gaps = 58/270 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V + IT GND +F++ + SG LLV++ ++DRE ++ YSL+ITAT+ +
Sbjct: 2556 VSFEITGGNDYTSFSIN------------ASSG-LLVSTMELDRENISSYSLIITATNYR 2602
Query: 88 G---INKAETHVTVDVLDENDNSPVFSQKVY---------------RFIVGDLKSSLNSN 129
+N + T V V VLD+NDNSP F+ Y + GDL N +
Sbjct: 2603 ADPQLNTS-TVVEVTVLDQNDNSPTFNSSDYAAQIDLTAPVGSEVIQVFAGDLDEGANGD 2661
Query: 130 VSHW-KKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YEL 187
+ ++ K S GS + L P+ ++ Q +D V +EL
Sbjct: 2662 IWYFLKNDDSYGSY-----------FTLDDPNQGIITTRQEFNF-------NDSVRVFEL 2703
Query: 188 TVEAHDLQSP---SRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAV 244
V+A+D P V FN P+ ++Q++ A + + T
Sbjct: 2704 QVDAYDGGEPRESVSTNVTVTVVNTAFNQPIFTEQQIVVSPLENQAAGTTVVELSATHYT 2763
Query: 245 RPTKRIDF-SETDGEMEGRIVFALEKETER 273
PT I F G G FAL +T R
Sbjct: 2764 DPTGEITFYCIRSGNELGN--FALNNKTGR 2791
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 60/128 (46%), Gaps = 29/128 (22%)
Query: 1 MENSKSGTGVKGLPILVASSHKHP-HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKS 59
+EN +GT V L A+ + P ++ Y I GN+ FAL N T
Sbjct: 2745 LENQAAGTTVVELS---ATHYTDPTGEITFYCIRSGNELGNFALNNKTGR---------- 2791
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH------------VTVDVLDENDNS 107
L T+ ++DREE+ Y+L++ A V G ++ +TV+V DENDN
Sbjct: 2792 ---LYTTRELDREEMPVYTLMVEAILVNGTGGCDSRRRKRAIPANQIVITVEVGDENDNP 2848
Query: 108 PVFSQKVY 115
PVFSQ Y
Sbjct: 2849 PVFSQSSY 2856
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 92/206 (44%), Gaps = 42/206 (20%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
++TS +DRE + ++ +T D +G+ + VTV VLDENDNSP+F ++ Y
Sbjct: 1307 IITSALLDRETNSTFTFNVTVKDAEGMEDTAS-VTVVVLDENDNSPLFDRETYT------ 1359
Query: 123 KSSLNSNVSHWKKFSS-IGSVSATDAD---GDKVAYKLAVPSN--LVVIVPQTGELLLTG 176
+NV+ K I V+ATD D + Y + ++ + I +TGE+ L
Sbjct: 1360 -----TNVTEDKPGGGLILQVTATDEDEGSNSNITYSIRSGNSDEVFYIDSRTGEIFLQT 1414
Query: 177 DPPSD---DVEYELTVEAHDL-------------------QSPSRYAREPAQVWLQFNSP 214
+ D EY L+V+A D +SP + +P QV L N P
Sbjct: 1415 NKSLDYETTPEYRLSVKAQDGGESPRSDVADVTISVIGVNESPPQCKEQPFQVTLMENQP 1474
Query: 215 VLQDEQLLQMIDRKSEAPHRIEKRRV 240
QLLQ+ +A +E R V
Sbjct: 1475 --SPVQLLQVEVTHEDAAEVLEYRLV 1498
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 64/133 (48%), Gaps = 27/133 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATDV 86
+ Y+I GN+ +TFA+ + SG + L T+ D D+ Y LV+ A D
Sbjct: 1183 ITYTIISGNEQNTFAI------------DGGSGEITLETTLDHDQGN-RSYQLVVEAKD- 1228
Query: 87 KGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
G + TVD+L +ENDN+PVF Y F V + ++ S +G V A
Sbjct: 1229 AGTPIRSSTATVDILVVNENDNTPVFQNTTYNFEV----------YENERRSSFVGMVRA 1278
Query: 145 TDADGDKVAYKLA 157
TD DGD ++Y +
Sbjct: 1279 TDLDGDSLSYTIG 1291
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 64/137 (46%), Gaps = 16/137 (11%)
Query: 69 IDREEVAQYSLVITATDVK-GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE Y L++ ATD K + A T V V V D ND P F Y FIV + +
Sbjct: 1955 LDRETKDSYELLVRATDDKIPQHTAYTTVAVTVTDINDQDPTFQSPPYHFIVSEAAT--- 2011
Query: 128 SNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPS-NLVVIVPQTGELLLTGDPPSD-D 182
S++G V ATD D K + Y + + N+ I TG++ G +
Sbjct: 2012 -------PGSAVGGVIATDMDLGKNGEILYSITADNDNVFSIDNTTGQITTVGQLDREAT 2064
Query: 183 VEYELTVEAHDLQSPSR 199
EY +TVEA D+ SP R
Sbjct: 2065 AEYNITVEATDMGSPPR 2081
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 37/139 (26%)
Query: 17 VASSHKHPHQLVRYSITQG-NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVA 75
V +H+ +++ Y + QG N F S +S +G LL T+ +DREE +
Sbjct: 1482 VEVTHEDAAEVLEYRLVQGPNSTSPF------------SVDSTTG-LLNTTQSLDREETS 1528
Query: 76 QYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK 135
QYSL I+ +D + + + VT +LD+NDN+P F SNVSH+
Sbjct: 1529 QYSLNISVSDGENVEFCQVQVT--ILDQNDNTPQF---------------FPSNVSHFNV 1571
Query: 136 FSS------IGSVSATDAD 148
S +G V A D D
Sbjct: 1572 EESVAVGTVVGQVFANDTD 1590
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 15/95 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSIT NDN F++ N T + T G +DRE A+Y++ + ATD+
Sbjct: 2032 ILYSITADNDN-VFSIDNTTGQ-------------ITTVGQLDREATAEYNITVEATDMG 2077
Query: 88 GINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
+ T VTV V D ND+ P FS + +G+
Sbjct: 2078 SPPRNTTAMVTVSVEDVNDSPPKFSNSTFEVYIGE 2112
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 74/163 (45%), Gaps = 23/163 (14%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
SGD D V S+ + ATD GI+ + V + V D NDN+P F++ VY V +++
Sbjct: 1107 SGDNDTATVV-VSVQVLATD--GIHNSTAVVDITVTDVNDNAPEFTKDVYEVEVN--ETA 1161
Query: 126 LNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPS----NLVVIVPQTGELLL--TGDP 178
N V + V ATD D GD + S N I +GE+ L T D
Sbjct: 1162 TNGTV--------VAMVMATDIDSGDNGNITYTIISGNEQNTFAIDGGSGEITLETTLDH 1213
Query: 179 PSDDVEYELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQD 218
+ Y+L VEA D +P R + + + N+PV Q+
Sbjct: 1214 DQGNRSYQLVVEAKDAGTPIRSSTATVDILVVNENDNTPVFQN 1256
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 73/154 (47%), Gaps = 27/154 (17%)
Query: 58 KSGVLLVTSGDIDREEVA--QYSLVITATDVKGI-NKAETHVTVDVLDENDNSPVFSQKV 114
+SG++ V + ++D E + +L +TA+D + N A + VT+ V D NDN+P F
Sbjct: 1614 ESGIISVLA-NLDYESLQDPNITLTVTASDGGEVPNSAVSTVTISVTDVNDNAPEFDTSH 1672
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL-----AVPSNLVVIV 166
Y F V S N N S +G+V A D D +V+Y L VP N I
Sbjct: 1673 YNFQV-----SENMNASTL-----VGTVFAEDTDEGGNGEVSYYLDPSGEEVPFN---IS 1719
Query: 167 PQTGELLLTG--DPPSDDVEYELTVEAHDLQSPS 198
+TGE++ T D D + TV A D P+
Sbjct: 1720 KETGEIITTEVLDREGDAASFTFTVFAQDNGMPT 1753
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Query: 40 TFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVD 99
TF +++ + + S V +V S ++DRE Y++ + +D G A T + V
Sbjct: 549 TFQIEDGSFGQFNLSDARDGEVQVVISSELDREMTDSYNITVKVSD--GTFDATTQLIVT 606
Query: 100 VLDENDNSPVFSQKVYRF 117
V D NDN PV +Q Y F
Sbjct: 607 VQDVNDNFPVMNQTGYTF 624
>gi|395542254|ref|XP_003773048.1| PREDICTED: protocadherin Fat 1 [Sarcophilus harrisii]
Length = 4589
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 125/285 (43%), Gaps = 44/285 (15%)
Query: 23 HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVIT 82
H V Y I GN F + NP SGV+ +T +D E + Y+L++
Sbjct: 1693 HSQSSVVYEIKDGNIGDAFDI-NP-----------NSGVI-ITQKTLDFETLPFYTLIVQ 1739
Query: 83 ATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
AT++ G++ A T V V + DENDN PVF Q Y ++ + +S+NS V K + +
Sbjct: 1740 ATNMAGLS-ANTTVWVHLQDENDNVPVFMQAEYTGLISE-SASINSVVLTDKNVPLV--I 1795
Query: 143 SATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQ 195
A DAD + + Y++ PS I TG + +L+ D + + TV+ HD+
Sbjct: 1796 RAMDADKESNALLVYQIVEPSAHKYFAIDSSTGAIRTVLSLDYEEAHI-FHFTVQVHDMG 1854
Query: 196 SPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKR------ 249
+P +A A V + +ID P + + + PT +
Sbjct: 1855 TPRLFAEYAANV-------------TIHVIDINDCPPVFSKMLYESSVLVPTYKGVKVIT 1901
Query: 250 IDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVR 294
++ ++ D ++++++ + EKF I + ITV +R
Sbjct: 1902 VNATDADSVAFSQLMYSIPEGNIGEKFLIDPKTGTITVQNTTQLR 1946
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 32/199 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + Y+I GN++ F++ +S +G + + +
Sbjct: 3247 GTEVLQVYAASRDIEVNAEITYAIISGNEHGKFSI------------DSTTGAIFIID-N 3293
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L + ATD +N V ++V D NDN+PVFSQ Y ++ + + L
Sbjct: 3294 LDYESSHEYYLTVEATDGGTPSLNDVAA-VNINVTDINDNTPVFSQDTYTAVISE-DAVL 3351
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
S+ +V A DADG + + Y + N I P GE+ +T +
Sbjct: 3352 E---------QSVVTVMADDADGPSNNYIHYSIIDGNQGNPFTIDPVKGEIKVTQLLDRE 3402
Query: 182 DVE-YELTVEAHDLQSPSR 199
+ Y LTV+A D SP R
Sbjct: 3403 MISGYTLTVQAADNGSPPR 3421
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 81/183 (44%), Gaps = 27/183 (14%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFA-----LKNPTTHEIRNSTE 56
ENS + T V G PI + +P +RY I G++ + F L N IR
Sbjct: 46 ENSAAKTYV-GHPIKMGIYLTNPSWELRYKIISGDNENLFKAEEHILGNFCFLRIR---- 100
Query: 57 SKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYR 116
+K G + ++RE Y+L + A + +A T + V VLD ND P+FS Y
Sbjct: 101 TKGG----NTAILNREVKDHYTLTVKAVEKNTNVEARTKIRVQVLDTNDLRPLFSPTSYS 156
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELL 173
SL N +SI VSATDAD + Y +++ I P +G ++
Sbjct: 157 V-------SLPENTMIR---TSIARVSATDADIGTNGEFYYSFKERTDMFAIHPTSGVVV 206
Query: 174 LTG 176
LTG
Sbjct: 207 LTG 209
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 15/91 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1175 LTYKITSGNPQGFFSI------------HPKTGLITTTSRKLDREQQNEHILEVTVTD-D 1221
Query: 88 GINKAET--HVTVDVLDENDNSPVFSQKVYR 116
GI T V V +LDENDN P F QK Y+
Sbjct: 1222 GIPPKSTIARVIVKILDENDNKPQFLQKFYK 1252
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN + F + +P EI+ + +DRE ++ Y+L + A D
Sbjct: 3371 IHYSIIDGNQGNPFTI-DPVKGEIK------------VTQLLDREMISGYTLTVQAADNG 3417
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN PVFS+ Y I+
Sbjct: 3418 SPPRVNTTTVNIDVSDVNDNPPVFSKGNYSIII 3450
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 115/283 (40%), Gaps = 54/283 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N I+N + + +DRE+ Y L ITATD
Sbjct: 2955 VTYYITGGDPLGQFAVEN-----IQNEWK------VYVKKPLDREKKDNYLLTITATD-- 3001
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G ++ V V VLD NDNSP+ + Y ++ + K I VSATDA
Sbjct: 3002 GTFSSKAIVEVKVLDANDNSPICEKSAY-------SDTIPEDTVPGKL---IMQVSATDA 3051
Query: 148 D---GDKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSPSRY 200
D ++ Y L+ P + + TGEL P D Y L V+A D R+
Sbjct: 3052 DIRSNAEITYTLSGPGAEKFKLNADTGELKTFA--PLDREQQAVYNLLVKATD--GGGRF 3107
Query: 201 AREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEME 260
+ S V E + S P+ I T P R+ ++ D +
Sbjct: 3108 CQM---------SVVFTLEDVNDNAPEFSADPYAITVFENTEPKTPLTRVQATDADAGLN 3158
Query: 261 GRIVFALEKETEREKFKIRDENPWITVDE-NGDVRVKKRWDFE 302
+I ++L + + ++DE +G +R++K D E
Sbjct: 3159 HKIAYSL----------VNSADGQFSIDESSGIIRLEKPLDRE 3191
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 76/170 (44%), Gaps = 30/170 (17%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
YSI+ GND+ F + + ++G+L V S +DRE +Y+L IT D+
Sbjct: 755 YSISGGNDDSCFII------------DLETGMLKVLS-PLDRETTEKYTLNITVYDLGIP 801
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
KA + + VLD NDN P F Q Y FI LNS + + ATD D
Sbjct: 802 QKAAWCLLDIRVLDANDNKPEFLQDNY-FIEVSENRELNSEIIQ---------IEATDKD 851
Query: 149 ---GDKVAYKLAVPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEAHD 193
+V Y L ++ I +TG + + G D V + L +EA D
Sbjct: 852 LGLNGEVKYYLLTDTDKFSIDSETGIVKVVGPLDREKQHVHF-LKIEARD 900
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 98/229 (42%), Gaps = 34/229 (14%)
Query: 65 TSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
T+ +DRE V+ Y L + ATD +G+ + T + ++V D NDN+P S+ VY V
Sbjct: 1094 TAEKLDRETVSHYWLTVFATD-QGVVPLSSFTEIYIEVEDVNDNAPQTSEPVYYPEV--- 1149
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAV--PSNLVVIVPQTGELLLTGD 177
+ + K S+ + A D D DK+ YK+ P I P+TG L+T
Sbjct: 1150 -------MENSPKDVSVVQIEAFDPDSSSNDKLTYKITSGNPQGFFSIHPKTG--LITTT 1200
Query: 178 PPSDDVE------YELTVEAHDLQSPSRYAREPAQVWLQF-NSPVLQDEQLLQMIDRKSE 230
D E E+TV + S AR ++ + N P Q LQ K
Sbjct: 1201 SRKLDREQQNEHILEVTVTDDGIPPKSTIARVIVKILDENDNKP-----QFLQKF-YKIR 1254
Query: 231 APHRIEKRRVTRAVR-PTKRIDFSETDGEMEGRIVFALEKETEREKFKI 278
P R + R A R P R+ ++ D I +++E E KF I
Sbjct: 1255 LPERDKPERERSAKREPIYRVIATDKDEGPNAEISYSIEDGDEHGKFFI 1303
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D EE+ ++ L++ A D G+ ++ VTVDV D NDN P+F Q +Y ++ +
Sbjct: 2349 LDYEEIQEHKLLVRAVD-SGMPPLSSDMIVTVDVTDLNDNPPLFDQLLY-------EAKI 2400
Query: 127 NSNVSHWKKFSSIGSVSATDADGDKVAYKL 156
+ H + + + A +D DK+ Y +
Sbjct: 2401 SEQAPHGHFVTCVKAYDADSSDIDKLEYSI 2430
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 13/88 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSIT+G+ F + T GV+ V + +D E Y L I ATD
Sbjct: 2215 VFYSITEGDPFSQFTINFNT------------GVINVIA-PLDFESHPAYKLSIRATDSL 2261
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVY 115
AE V + V D NDN PVF+Q+ Y
Sbjct: 2262 TGVHAEVFVDIIVEDVNDNPPVFAQQSY 2289
>gi|351696441|gb|EHA99359.1| Protocadherin beta-15 [Heterocephalus glaber]
Length = 749
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ K + ++TV V D NDN+P F+Q Y V +
Sbjct: 400 LVTEGALDRESRAEYNITITVTDLGTPRLKTQHNITVQVSDVNDNAPTFTQTSYTLWVPE 459
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP---------SNLVVIVPQT 169
NS H IG++SATD D +V Y L +P ++LV I T
Sbjct: 460 ----NNSPALH------IGTISATDRDSGTNAQVTYSLLLPPPRDPHPGLASLVSINADT 509
Query: 170 GELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
G+L + + +E V A D SP+
Sbjct: 510 GQLFALRALDYETLRAFEFRVGAADRGSPA 539
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 46 PTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK-AETHVTVDVL 101
P +H I N + + LV ++DREE ++Y L +TA D + T + V V+
Sbjct: 172 PNSHFHVSIYNRGDGRKYPELVLDKELDREEQSEYRLTLTALDGGSPPRTGTTKIHVLVM 231
Query: 102 DENDNSPVFSQKVY 115
D NDN+P F+Q +Y
Sbjct: 232 DVNDNAPEFAQTLY 245
>gi|426350419|ref|XP_004042771.1| PREDICTED: protocadherin beta-15 [Gorilla gorilla gorilla]
Length = 571
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 56/102 (54%), Gaps = 15/102 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ K E +TV V D NDN+P F+Q Y VG+
Sbjct: 403 LVTEGALDRETRAEYNITITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVGE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPS 160
NS H IGSVSATD D +V Y L +PS
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSL-LPS 493
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 16/92 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVG- 120
LV ++DREE AQ L +TA D ++ T + + VLD NDN+P F Q +Y V
Sbjct: 194 LVLDTELDREEQAQLRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFVQALYEVQVPE 253
Query: 121 --------------DLKSSLNSNVSHWKKFSS 138
DL + N +S+ +SS
Sbjct: 254 NSPVGSLVVKVSARDLDTGTNGEISYSLYYSS 285
>gi|348558978|ref|XP_003465293.1| PREDICTED: protocadherin-16-like [Cavia porcellus]
Length = 3297
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 71/151 (47%), Gaps = 19/151 (12%)
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
G +D E+ Y L + A D G ++ ++TV V D NDN+P FSQ +Y+ ++
Sbjct: 2334 GPLDFEQCDHYHLQLLAHD--GPHEGRANLTVLVEDVNDNAPTFSQSLYQVML------- 2384
Query: 127 NSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLLT----GDPP 179
+ H S+I SVSATD D ++Y LA P+ + P G L T G
Sbjct: 2385 ---LEHTPPGSAILSVSATDRDSGANGHISYYLASPAEGFSVDPNNGTLFTTVGTVGFGH 2441
Query: 180 SDDVEYELTVEAHDLQSPSRYAREPAQVWLQ 210
++ +EA D +P R AR V LQ
Sbjct: 2442 EGPGVVDVVLEARDHGAPGRAARATVHVQLQ 2472
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVIT 82
H V Y+I GN F L+ P E L LV +D E + QY+L +
Sbjct: 2514 HATVDYTIISGNRGRVFQLE-PRLAEAGEGVGPGPQALGCLVLLEPLDFESLTQYNLTVA 2572
Query: 83 ATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
A D + + VTV VLD NDN PVF+Q YR V
Sbjct: 2573 AADRGQPPRSSAVPVTVTVLDVNDNPPVFTQASYRVTV 2610
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 84/203 (41%), Gaps = 18/203 (8%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V + P+ + YS+ Q +++ +P T E+
Sbjct: 1115 ENQPPGTSVGR--VFATDRDSGPNGRLTYSLRQLSEDSKAFRIHPQTGEV---------- 1162
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
T +DRE+ + + L++ D ++ T V + VLD NDNSP F Q G
Sbjct: 1163 --TTLQTLDREQQSSFQLLVQVQDGGSPPRSTTGTVHIAVLDLNDNSPTFLQ-ASGAAGG 1219
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGELLLTGDP- 178
L + V +++ + + + + Y L P S L + P +GELL
Sbjct: 1220 GLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGELLTAASLI 1279
Query: 179 PSDDVEYELTVEAHDLQSPSRYA 201
++ Y LT+ AHD SP R A
Sbjct: 1280 RAERPHYVLTLSAHDQGSPPRSA 1302
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 25/131 (19%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LVR++++ G+ F L + SG L + +D E ++ LV+ A
Sbjct: 2632 PHGLVRFTLSSGDPLGLFEL------------DENSGALRLAQ-SLDCETQTRHQLVVQA 2678
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G + A VTV+V D ND+ P F + L +SL N +++ ++
Sbjct: 2679 ADPAGTHFALAPVTVEVQDVNDHGPAFPLNI-------LSTSLAENQPPGTLVTTLHAI- 2730
Query: 144 ATDADGDKVAY 154
DGD A+
Sbjct: 2731 ----DGDAGAF 2737
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 105/270 (38%), Gaps = 43/270 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y + G TF L+ PT+ E+R +T +DRE + Y+ ++A D
Sbjct: 1889 VTYYLGAGTAG-TFLLE-PTSGELRTATA------------LDREHCSSYAFSVSAVDGA 1934
Query: 88 GINKAET--HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
T VT+ V D ND++P F R + SL++ ++ ++ A
Sbjct: 1935 AAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLPRPGPSLSTPT------LALATLRAE 1988
Query: 146 DADGD---KVAYKLA-VPSNLVVIVPQTGELLLTGDP----PSDDVEYELTVEAHDLQSP 197
D D + Y+LA P + TGE+ + P P D V L + A DL P
Sbjct: 1989 DRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARSPVTLGPRDRV---LFIVATDLGRP 2045
Query: 198 SRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDG 257
+R A V LQ S E + SEA R E V K + G
Sbjct: 2046 ARSATGVVIVGLQGES-----EHGPRFPRASSEAVLR-ENAPPGTPVSSPKAVH----AG 2095
Query: 258 EMEGRIVFALEKETEREKFKIRDENPWITV 287
G I +++ E+ F I+ ITV
Sbjct: 2096 GSNGPITYSILSGNEKGIFSIQPSTGAITV 2125
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 405 EGGEGH-FAL----------STQDSVIYLVCVARQLDREERDAYNLRVTATDSGSPPLRA 453
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + + D NDN+P F +++YR
Sbjct: 454 EAAFVLHITDVNDNAPTFDRQLYR 477
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ TF L E R + LV +G++DRE + Y L + A D G+
Sbjct: 179 YALSGDGAGETFRL------ETRPGPDGAPVPELVIAGELDRENRSHYMLQLEAYD-GGL 231
Query: 90 --NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+A+ + V +LD ND++P F+Q Y +V
Sbjct: 232 PPRRAQALLDVTLLDINDHAPAFNQSRYHAVV 263
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y + G D H F L S +G L V +DRE+ A++ L + A+D
Sbjct: 1579 VSYRLASGGDGH-FRL------------HSSTGALSVVR-PLDREQRAEHVLTVVASDHG 1624
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIV 119
++ T + TV ++D ND +P F Q+ Y ++
Sbjct: 1625 SPPRSSTQLLTVSIVDVNDEAPTFQQQEYSVLL 1657
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 14/109 (12%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
D E + L++ A D ++ + T V+V V E++ PVF + F V +
Sbjct: 2772 FDYEHTGSFRLLVGAADAGNLSASVT-VSVLVTGEDEYDPVFLAPAFHFQVPE------- 2823
Query: 129 NVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLL 174
++ S+G V ATD DG V Y LA S I TG L L
Sbjct: 2824 ---GAQRGHSVGHVQATDEDGGADGLVLYSLATSSPYFGINQTTGVLYL 2869
>gi|195576483|ref|XP_002078105.1| GD22718 [Drosophila simulans]
gi|194190114|gb|EDX03690.1| GD22718 [Drosophila simulans]
Length = 3385
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 16/115 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+ +G +DRE+ +Y L + A+D G +AET +T+ + D+NDN+P F Y F +L
Sbjct: 1488 ITVAGHLDREQQDEYILKVVASD--GAWRAETPITITIQDQNDNAPEFEHSFYSFSFPEL 1545
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELL 173
+ S+ + +G + ATD D ++Y L PS + I P TGE+
Sbjct: 1546 QQSI----------ALVGQIIATDRDKQGPNSVISYSLQQPSPMFSIDPATGEVF 1590
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 18/142 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
L+ + +DRE ++Y L I +D G+ E + T+ V D NDN P+F VY F + +
Sbjct: 421 LILNDTLDRETKSKYELRIRVSD--GVQYTEAYATIQVSDTNDNPPLFEDTVYSFDIPE- 477
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPS----NLVVIVPQTGELLLTGD 177
+ ++ +G + A DAD G V S ++ + PQTG L LT
Sbjct: 478 ---------NAQRGYQVGQIVAKDADLGQNAQLSYGVVSDWANDVFSLNPQTGMLTLTAR 528
Query: 178 PPSDDVE-YELTVEAHDLQSPS 198
++V+ Y L V+A D PS
Sbjct: 529 LDYEEVQHYILIVQAQDNGQPS 550
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 85/180 (47%), Gaps = 33/180 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYSI G+ NH F++ T GV+ V +++ E +++YSL + A D
Sbjct: 857 IRYSIVMGDQNHDFSISEDT------------GVVRVAK-NLNYERLSRYSLTVRAEDCA 903
Query: 88 GINKA--ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
N A +T+++LD NDN P F Y V +++++ N + + +V+A
Sbjct: 904 LENPAGDTAELTINILDINDNRPTFLDSPYLARV--MENTVPPNGGY------VLTVNAY 955
Query: 146 DAD----GDKVAYKLA-VPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
DAD +V Y L S+L I +G++ L P D EY LT+ A D SP
Sbjct: 956 DADTPPLNSQVRYFLKEGDSDLFRINASSGDIALL--KPLDREQQSEYTLTLVAMDTGSP 1013
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 13/82 (15%)
Query: 69 IDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+DRE + Y L ITA D +G ET + + +LDENDNSPVF K Y V +
Sbjct: 780 LDRELRSSYLLNITARD-RGEPPQSTETQLLIRILDENDNSPVFDPKQYSASVAE----- 833
Query: 127 NSNVSHWKKFSSIGSVSATDAD 148
N+++ + + VSATD D
Sbjct: 834 NASIG-----AMVLQVSATDVD 850
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 18/156 (11%)
Query: 68 DIDREEVAQYSLVITATDVKGINK----AETHVTVDVLDENDNSPVFSQKVYRFIVGDLK 123
+IDRE + + L + ATD ++ E VTV V D NDN+PVF +
Sbjct: 99 EIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFS 158
Query: 124 SSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPP 179
+S S+ +++ V A DAD V Y++ + P L + TG + T P
Sbjct: 159 TSKGSS-------TAVMQVHAKDADSSSNGLVTYEIVSGPQELFKLQRNTGVITFTPGPQ 211
Query: 180 -SDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSP 214
+V Y+LT+++ D S R ++V++ +P
Sbjct: 212 FKQEVRYQLTLKSTDEAVQSE--RRSSEVYITIITP 245
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTV--DVLDENDNSPVFS 111
S ++G+L +T+ +D EEV Y L++ A D G T +TV +VLD NDN+P+F
Sbjct: 515 SLNPQTGMLTLTA-RLDYEEVQHYILIVQAQD-NGQPSLSTTITVYCNVLDLNDNAPIFD 572
Query: 112 QKVY 115
Y
Sbjct: 573 PMSY 576
>gi|47213179|emb|CAF95368.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3762
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 97/209 (46%), Gaps = 30/209 (14%)
Query: 79 LVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS 138
L ++A+ V G + + T V++ V DENDN+PVF QK Y +G + + + + S
Sbjct: 1672 LEVSASTVGGASSS-TFVSIYVTDENDNAPVFRQKEY---LGQISEAADIGAMVTGEGSR 1727
Query: 139 IGSVSATDADGDK---VAYKLAVPSNLVV--IVPQTGEL-LLTGDPPSDDVEYELTVEAH 192
+ A+DAD D + Y++ P L V I P G + LL+ EY +V+
Sbjct: 1728 PLVIQASDADRDANALLVYQILEPELLSVFSIDPSMGTISLLSAVDFEARAEYRFSVQVR 1787
Query: 193 DLQSPSRYAREPAQVWLQ----------FNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTR 242
D P RYA EPA+V ++ F SPV + +L + R E H + R
Sbjct: 1788 DSGEPCRYAAEPAKVTVRVLDLNDCAPHFTSPVYESSVILPAV-RGMEVTH-VTARDADS 1845
Query: 243 AVRPTKRIDFSETDGEMEGRIVFALEKET 271
AV +S +G + G F++E +
Sbjct: 1846 AVA------YSIVEGNLHG--AFSVEPSS 1866
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 75/156 (48%), Gaps = 23/156 (14%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
++VT+ +D E +Y + A +AE V ++V DENDNSP F+ Y
Sbjct: 379 VIVTTQKLDYESKRRYQFDVAANG----GEAEARVVIEVKDENDNSPQFASPSY------ 428
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLA--VPSNLVVIVPQTGELLLTG 176
++SL+ N SS+ VSATDADG K V Y LA PS I P TG + +G
Sbjct: 429 -EASLDENAPVG---SSVLQVSATDADGGKNAFVTYALANSGPSPF-TIHPFTGVISTSG 483
Query: 177 DPPSDDV--EYELTVEAHDLQSP-SRYAREPAQVWL 209
+ + Y L V A D SP SR + P + L
Sbjct: 484 HLDYELMRRRYHLRVWASDSGSPFSRVSECPVTITL 519
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 79/177 (44%), Gaps = 23/177 (12%)
Query: 24 PHQLVRYSITQGNDNHTF---ALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLV 80
PH + YS+ G+D+ F ALK +R T S + LL +RE Y+L
Sbjct: 33 PHWELDYSVVSGDDDDLFQAEALKVGDFCFLRVRTRSGNAALL------NREVRDAYTLT 86
Query: 81 ITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG 140
+ AT+ +A+T V V VLD ND P+F Y + + + SS+
Sbjct: 87 VEATEKSSDLRAKTKVLVRVLDANDLKPLFYPASYSVSIAE----------DAELRSSVV 136
Query: 141 SVSATDADGDKVA---YKLAVPSNLVVIVPQTGEL-LLTGDPPSDDVEYELTVEAHD 193
+VSATDAD A Y ++ + P TG + L+ + YELTV A D
Sbjct: 137 TVSATDADVGSNADFYYSFTSRAHPFAVDPFTGTVSLVRKLNHTRSQRYELTVLAED 193
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I GN++ F L +S++G+L + + +D E Y L + K
Sbjct: 3190 VAYRIVSGNEDGRFLL------------DSRTGLLTLVA-PLDFEASRTYYLSVEGRRGK 3236
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRF-IVGDL-KSSLNSNVSHWKKFSSIGSVSAT 145
T V V+V D NDN+PVF + YR I DL SL V + G V+A+
Sbjct: 3237 QTLSDITTVMVNVTDVNDNAPVFEEGGYRVEIKEDLPPGSLVMKVPAQEPPVFGGKVTAS 3296
Query: 146 DADGDK---VAYKLAV--PSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSP 197
D DG + Y + P I P++GE+ + ++V Y LTV+A D P
Sbjct: 3297 DQDGPSNSLLRYSIVSGDPLQQFSIHPRSGEISVAAALDREEVPHYSLTVQAADGGDP 3354
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 85/192 (44%), Gaps = 27/192 (14%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK-AET 94
N+ F+L NP E + S + SGVL T DREE Y +V+ D + + A
Sbjct: 1942 NEPLVFSLLNP---EGKFSISASSGVLETTGIPFDREETDVYEVVVMVRDTRTPPRTARA 1998
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---- 150
V V + D ND+ P FS + ++ + SS +V + A+ DGD
Sbjct: 1999 QVRVFIDDVNDSPPQFSNLPFSIVIPE--SSEPGDVLY----------QASAVDGDLGEN 2046
Query: 151 -KVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPSRYAREPAQVW 208
+ Y L +L I P G++ L + + +Y LTV A D PS A AQ+
Sbjct: 2047 ASILYSLEEDYSLFRIDPHAGDISLQRPLDFEALNKYVLTVLAVDEGEPSHSAT--AQLS 2104
Query: 209 LQF---NSPVLQ 217
LQ +SPV Q
Sbjct: 2105 LQVRNQSSPVFQ 2116
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 76/174 (43%), Gaps = 35/174 (20%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL-LVTSGDIDREEVAQYSLVITATD 85
L+ Y+I+ GN + F S ++ +G L LV S +DRE A Y L IT D
Sbjct: 707 LLVYAISAGNQDGCF------------SIDTFAGDLRLVCS--LDRERNAFYVLNITVYD 752
Query: 86 VKGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+ K A V V V D NDN P F Q Y V + N+ V S + + A
Sbjct: 753 LGMPQKTAWRFVAVTVTDVNDNPPEFDQLRYVTRVPE-----NAEVD-----SVVFTAHA 802
Query: 145 TDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQ 195
D D G ++ + L P+N I P TGE+ L P D T HDLQ
Sbjct: 803 ADPDLDVGGRLRFSLLTPTNAFSIDPVTGEVTLKA--PLD----RETTPRHDLQ 850
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 15/99 (15%)
Query: 16 LVASSHKHP-HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
+ AS P + L+RYSI G+ F++ +P + EI + +DREEV
Sbjct: 3293 VTASDQDGPSNSLLRYSIVSGDPLQQFSI-HPRSGEIS------------VAAALDREEV 3339
Query: 75 AQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQ 112
YSL + A D + VT+ V D NDN P+FS+
Sbjct: 3340 PHYSLTVQAADGGDPPLSSAILVTITVADVNDNPPIFSR 3378
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 13/95 (13%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYR 116
K+GVL VT +D E + L + A+D V G+ +E V ++V D NDN+PVFSQ+ Y
Sbjct: 2165 KTGVLTVTD-PLDYESQRAHVLTVRASDSVTGV-FSEASVEIEVEDVNDNAPVFSQRAYG 2222
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK 151
+V + +S+ VSA+D D +
Sbjct: 2223 AVVAE----------GLPVGTSVVQVSASDGDSGR 2247
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 73/153 (47%), Gaps = 26/153 (16%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
++LV IT G+ FA+ +S+ G L+ + +DRE +++L + AT
Sbjct: 2889 NRLVTCYITDGDPLGHFAIIQ----------QSEGGWGLILTQPLDREVKDRHALRVMAT 2938
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
D G +A V V VLD NDNSP Q VY V + NS S + + VSA
Sbjct: 2939 D--GKFQASVSVDVHVLDINDNSPQCEQLVYTEAVME-----NSPSSRF-----VLKVSA 2986
Query: 145 TDAD---GDKVAYKLAVP-SNLVVIVPQTGELL 173
D D +V+Y L P ++ + +TGELL
Sbjct: 2987 VDPDVGANGQVSYSLHGPNADKFHLNYRTGELL 3019
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 14/98 (14%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFS 111
S + ++GV+ ++ +DRE++ Y L + D+ G + THV + VLD NDN+P S
Sbjct: 1039 SIDEETGVI-CSAKILDREKMPHYWLSVLVGDL-GTEPLLSWTHVFLRVLDVNDNAPQLS 1096
Query: 112 QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
Q VY +S+ NV S+ V ATDAD
Sbjct: 1097 QPVYF-------ASVQENV---DGVGSVAQVWATDADA 1124
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+T +DRE +Y+LV ATD G ++ + + + D NDN P FS Y+ V D
Sbjct: 3018 LLTLAVLDREAEPEYNLVAKATDGGG-RSCQSDILLMIQDMNDNPPRFSSSHYQLTVFD 3075
>gi|391332942|ref|XP_003740885.1| PREDICTED: protein dachsous-like [Metaseiulus occidentalis]
Length = 3117
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 68/147 (46%), Gaps = 14/147 (9%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+ S +D E YS+ + TD G + AET +T+DVLD ND +P+FS Y ++
Sbjct: 2292 ITLSKPLDFETQNNYSVTVMVTD--GAHTAETTLTIDVLDVNDRTPIFSSTSYSVVL--- 2346
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPP--S 180
N K ++ + A D +V Y L PS LV I +G+L L +
Sbjct: 2347 ------NGHQATKLLTVAATDADSGDNGRVKYSLEPPSELVKIDEWSGQLFLRDEISLRK 2400
Query: 181 DDVEYELTVEAHDLQSPSRYAREPAQV 207
V Y V DL SP+R A P ++
Sbjct: 2401 SFVSYS-NVIVRDLGSPARQASVPLRI 2426
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 24/173 (13%)
Query: 69 IDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE Y++ + A D A T V + V D NDN P F + ++ F V +
Sbjct: 1034 LDRETEDSYTIQVEAVDNGNPPLSASTTVFIAVSDANDNEPQFVRDMFEFAVEE------ 1087
Query: 128 SNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL--VVIVPQTGEL----LLTGDPPS 180
+ + S+G + A D D GD A + ++ SN+ I P TGE+ L + S
Sbjct: 1088 ----NAESGRSVGEIRAIDKDLGDNAAIRYSLLSNIDEFSINPMTGEMHTKNRLDREKRS 1143
Query: 181 DDVEYELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQMIDRKSE 230
+ YE VEA D + + +R +V + N+P+ D Q + R+ E
Sbjct: 1144 N---YECIVEAQDQGAKPKSSRVTVRVRVLDKNDNAPLFADNQETSFVLRRDE 1193
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 124/331 (37%), Gaps = 54/331 (16%)
Query: 6 SGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVT 65
+ G L + V +S H + Y++ FA+ + TT E+R T
Sbjct: 1622 AAVGTVFLRVAVPNSTASAHN-ISYTLQHEATTTPFAI-DATTGELR------------T 1667
Query: 66 SGDIDREEVAQYSLVITA--TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLK 123
+ +DRE V +Y+L + V VDVLD NDN P F + Y
Sbjct: 1668 TRPLDRERVDRYNLTVFGDHNTYSASQYDSATVIVDVLDVNDNVPDFGESCY-------- 1719
Query: 124 SSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL--AVPSNLVVIVPQTGELLLTGDP 178
N +V +++S I + A D D ++ Y + N+ I P +G L
Sbjct: 1720 ---NLSVPENREWSFIHRLHAADDDLGENGEIVYSIEEGNVGNVFSIAPLSGNLSCKALD 1776
Query: 179 PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKR 238
EY L V A D +P + R ++W+ D Q + +P E
Sbjct: 1777 RESASEYSLVVLAQDRGAPPKIGR--CRLWITVMDQNDNDPQF----EHSEYSPQVREDA 1830
Query: 239 RVTRAVRPTKRIDFSE-TDGEMEGRIV------FALEKETER----EKFKIRDENPWITV 287
+ V D E +GE+ ++ F+++ ET R +F R+ P T+
Sbjct: 1831 EIGTEVLMVNAHDIDEKNNGEVTYSLINATNSLFSIDSETGRIYTTGQFD-RENEPRYTL 1889
Query: 288 DENGDVRVKKRWDFEELGPEKTIDFWVTINN 318
+VR R +E T+ +T N
Sbjct: 1890 ----EVRASDRGSYETRSHSATVHIAITDAN 1916
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 96/240 (40%), Gaps = 42/240 (17%)
Query: 16 LVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVA 75
++A + Q +RY+I GN+ F + IR L+ +D E +
Sbjct: 786 VMAKTADQGLQGIRYAIRSGNEEGYFGID-----AIRG--------LISVEKPLDFESAS 832
Query: 76 QYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK 135
L + AT ++ V + +LD NDNSP F R V + S L
Sbjct: 833 SVLLSVQATSGVPLSFGHAQVNISILDVNDNSPRFESNFVRMSVPENSSLL--------- 883
Query: 136 FSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYE------ 186
S + V A DAD +++Y LA S + ++G ++L ++YE
Sbjct: 884 -SPVYFVHAQDADSGENGRISYSLAEESENFKVNERSGAIIL-----KRSLDYELRQQHR 937
Query: 187 LTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA 243
LTV A D +P+R V +Q N+PV + E ++ E E RVT A
Sbjct: 938 LTVIAEDGATPARRNNMTLLVEVQDINDNTPVFEYESYRISVEESMEV--DTEFLRVTAA 995
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
+++SG L + + +DREE + Y + + ATD G++ A T V V VLD ND+ PVF+ VY
Sbjct: 607 DARSGELCI-AAKLDREERSTYEIPVLATDRGGLSTA-TVVKVHVLDINDHRPVFNPVVY 664
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 58/124 (46%), Gaps = 25/124 (20%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD---- 85
YSI GN N+ F L + H R+ + L +G +DRE +SLVI A D
Sbjct: 159 YSIISGNTNNAFKL---SYHRERDEVLY---LDLQVNGILDREITPNFSLVIEAYDGGTP 212
Query: 86 -VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+KG+ V + + D NDN P+FSQ Y + + N+ V +S+ V A
Sbjct: 213 PLKGV----LLVNITIQDVNDNQPIFSQGNYVATIAE-----NATVG-----TSVLRVLA 258
Query: 145 TDAD 148
TD D
Sbjct: 259 TDTD 262
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 86/196 (43%), Gaps = 40/196 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYS+ D + NP T E+ T +DRE+ + Y ++ A D +
Sbjct: 1111 IRYSLLSNIDEFSI---NPMTGEMH------------TKNRLDREKRSNYECIVEAQD-Q 1154
Query: 88 GINKAETHVTVDV--LDENDNSPVFS--QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
G + VTV V LD+NDN+P+F+ Q+ + D + S +G +
Sbjct: 1155 GAKPKSSRVTVRVRVLDKNDNAPLFADNQETSFVLRRDEPAG-----------SEVGQIR 1203
Query: 144 ATDAD---GDKVAYKL---AVPSNLV-VIVPQTGELLLTGDPPSD--DVEYELTVEAHDL 194
A+DAD +V Y+L P++ V T L+ T S EY L V A DL
Sbjct: 1204 ASDADEGTNAEVVYELEATGFPTDGVKFFTINTDGLIKTKTELSQGKQKEYALRVVAKDL 1263
Query: 195 QSPSRYAREPAQVWLQ 210
SPS ++ ++ LQ
Sbjct: 1264 GSPSLESKVDIRITLQ 1279
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 18/110 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E +K GT V + V + + V Y IT GN+ + FA+ + +
Sbjct: 2556 EYTKVGTSV----LSVVAEDRDCDSEVNYDITSGNELNHFAID-----------KLDGSI 2600
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVF 110
L+ D DR ++ ++ ATD K A VT+ V DENDN PVF
Sbjct: 2601 FLLKELDFDR--AGEFKFIVRATDTKNYVLASLVGVTIKVKDENDNPPVF 2648
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 19/165 (11%)
Query: 54 STESKSGVLLVTSGDI-DREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQ 112
S + +SG LV+S + D E + I ATD G A V VD++ +++ P F +
Sbjct: 2697 SIDPRSG--LVSSNIVFDYESKKHHYFTIAATDAGG-KTAHVQVQVDIIGKDEYPPEFLK 2753
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQT 169
VY F V N+ + + S+G V ATD D + V Y + P+ + T
Sbjct: 2754 PVYHFTVPG-----NAPIGY-----SVGRVEATDIDSGQDGVVTYWMHYPNYNFNVNSTT 2803
Query: 170 GELLLTGDPPSDD--VEYELTVEAHDLQSPSRYAREPAQVWLQFN 212
G + + S++ +E L++EA ++ S + AQ+ + F+
Sbjct: 2804 GVIYVVKPMGSNERVIELTLSIEAGTGRTASSTSVTTAQLTIDFS 2848
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVY 115
L+V + +DRE A +++ I ATD +GI K T+ + D NDN+P F+Q Y
Sbjct: 404 LMVVNVPLDRERQANFTMTIMATD-QGIPPLKTSKQFTLHISDVNDNAPRFTQSEY 458
>gi|194855946|ref|XP_001968648.1| GG24390 [Drosophila erecta]
gi|190660515|gb|EDV57707.1| GG24390 [Drosophila erecta]
Length = 5150
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 16/115 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+ +G +DRE+ +Y L + A+D G +AET +T+ + D+NDN+P F Y F +L
Sbjct: 2967 ITVAGHLDREQQDEYILKVVASD--GAWRAETPITITIQDQNDNAPEFEHSFYSFSFPEL 3024
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELL 173
+ S+ + +G + ATD D ++Y L PS + I P TGE+
Sbjct: 3025 QQSI----------ALVGQILATDRDKQGPNSVISYSLQQPSPMFSIDPATGEVF 3069
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 18/142 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
LV + +DRE ++Y L I +D G+ E + T+ V D NDN P+F VY F + +
Sbjct: 1876 LVLNDTLDRETKSKYELRIRVSD--GVQYTEAYATIQVSDTNDNPPLFEDTVYSFDIPE- 1932
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPS----NLVVIVPQTGELLLTGD 177
+ ++ +G + A DAD G V S ++ + PQTG L LT
Sbjct: 1933 ---------NAQRGYQVGQIVARDADLGQNAQLSYGVVSDWANDVFSLNPQTGMLTLTAR 1983
Query: 178 PPSDDVE-YELTVEAHDLQSPS 198
++V+ Y L V+A D PS
Sbjct: 1984 LDYEEVQHYILIVQAQDNGQPS 2005
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 120/283 (42%), Gaps = 47/283 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT V + + + S + VR I GN+ F L+ E+
Sbjct: 398 ENAVNGTVVAAVAVKDSDSGLNGRTSVR--IVSGNELGHFRLE-----------EAADLH 444
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVG 120
++ +G +DREE+ +Y+L + A D + T H+ +DV D ND+ PVF + Y ++
Sbjct: 445 IVRVNGVLDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLS 504
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL--VVIVPQTGELLLT 175
+L + S + S++ATD D +V Y + + L + P TG ++ T
Sbjct: 505 ELAPT----------GSFVASITATDEDTGVNAQVHYDILSGNELKWFAMDPLTGLIVTT 554
Query: 176 GDPPSDDVEY----ELTVEAHDLQSPSRYAREPAQVW-LQFNSPVLQDEQLLQMIDRKSE 230
G + D E EL++ A D ++A +V L N Q Q Q + +
Sbjct: 555 G---ALDREIRDTVELSISARDGGPNPKFAYTQLKVIVLDENDEAPQFSQREQNVTLGED 611
Query: 231 APHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETER 273
AP + +T ++ D G + FAL ER
Sbjct: 612 APPQTIVALMTA----------TDHDQGTNGSVTFALAPSVER 644
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 33/180 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYSI G+ NH F++ T GV+ V +++ E +A+YSL + A D
Sbjct: 2312 IRYSIVLGDQNHDFSISEDT------------GVVRVAK-NLNYERLARYSLTVRAEDCA 2358
Query: 88 GINKA--ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
N A +T+++LD NDN P F Y V +++++ N + + +V+A
Sbjct: 2359 LENPAGDTAELTINILDINDNRPTFLDSPYLARV--MENTVPPNGGY------VLTVNAY 2410
Query: 146 DAD----GDKVAYKLA-VPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
DAD +V Y L S+L I +G++ L P D EY LT+ A D SP
Sbjct: 2411 DADTPPLNSQVRYFLKEGDSDLFRINASSGDIALL--KPLDREQQREYTLTLVAMDTGSP 2468
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 59/143 (41%), Gaps = 13/143 (9%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
+Y I GN ++ F L N + S + L T+G++DRE Y L I+A D
Sbjct: 193 QYEIVAGNVDNKFRLATTA-----NPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGS 247
Query: 89 INK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ V V +LD NDN P+F D SLN ++ +
Sbjct: 248 PPRFGYLQVNVTILDVNDNPPIFDHS-------DYNVSLNETALPGTPVVTVMASDNDLG 300
Query: 148 DGDKVAYKLAVPSNLVVIVPQTG 170
D K+ Y LA + + P+TG
Sbjct: 301 DNSKITYYLAETEHQFTVNPETG 323
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 11/81 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE + Y L ITA D +A ET + + +LDENDNSPVF K Y V + N
Sbjct: 2235 LDRELRSSYLLNITARDRGEPPQATETQLLIRILDENDNSPVFDPKQYSASVAE-----N 2289
Query: 128 SNVSHWKKFSSIGSVSATDAD 148
+++ + + VSATD D
Sbjct: 2290 ASIG-----AMVLQVSATDVD 2305
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 18/156 (11%)
Query: 68 DIDREEVAQYSLVITATDVKGINK----AETHVTVDVLDENDNSPVFSQKVYRFIVGDLK 123
+IDRE + + L + ATD ++ E VTV V D NDN+PVF +
Sbjct: 1554 EIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFS 1613
Query: 124 SSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPP 179
+S S+ +++ V A DAD V Y++ + P L + TG + T P
Sbjct: 1614 TSKGSS-------TAVMQVHAKDADSSSNGLVTYEIVSGPQELFKLQRNTGVVTFTPGPQ 1666
Query: 180 -SDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSP 214
+V Y+LT++A D S R ++V++ +P
Sbjct: 1667 FKQEVRYQLTLKATDEAVQSE--RRSSEVYITIITP 1700
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 16/94 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ ++RYSI+ GN+ F S + ++G +++ +D + + +Y L IT
Sbjct: 3259 PNGMLRYSISGGNERQDF------------SVDERTGGIVIQQ-QLDYDLIQEYHLNITV 3305
Query: 84 TDVKGINKAET--HVTVDVLDENDNSPVFSQKVY 115
D+ G + + +T+ + D NDN PVF QK Y
Sbjct: 3306 QDL-GYHPLSSVAMLTIILTDVNDNPPVFDQKEY 3338
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 51 IRNSTESKSGVL----LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDEND 105
I +TE GV L +DREE Y+L ++ D +++ V + V+DEND
Sbjct: 1088 IEGNTERMFGVFPDGFLFVRAPLDREERDYYALTVSCQDAGQPSRSSVVPVVIHVIDEND 1147
Query: 106 NSPVFSQKVYRFIV 119
N+P F+ + F +
Sbjct: 1148 NAPQFTNSTFTFSI 1161
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 30/120 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
V Y++ +GN+ F+L T L + +DRE + LV+ A D
Sbjct: 1312 VYYTLAKGNEAGQFSLDGATGQ-------------LSLARRLDRESQEIHHLVVVAKDAA 1358
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQ---------------KVYRFIVGDLKSSLNSNV 130
+K + VT+ VLDENDN+P F+Q ++ RF D +NS V
Sbjct: 1359 LKHPLSSNASVTIVVLDENDNAPEFTQSSSEVSVLETSPTGTELMRFRASDADQGVNSQV 1418
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTV--DVLDENDNSPVFS 111
S ++G+L +T+ +D EEV Y L++ A D G T +TV +VLD NDN+P+F
Sbjct: 1970 SLNPQTGMLTLTA-RLDYEEVQHYILIVQAQD-NGQPSLSTTITVYCNVLDLNDNAPIFD 2027
Query: 112 QKVY 115
Y
Sbjct: 2028 PMSY 2031
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 62/134 (46%), Gaps = 32/134 (23%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
YSI GN +F + + T EI ST S+ +DREE+A Y+LVI A D G+
Sbjct: 3582 YSIINGNLKQSFKI-DVQTGEI--STASR----------LDREEIATYNLVIGAIDT-GL 3627
Query: 90 --NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS-HWKKFSSIGSVSATD 146
V +++ D NDN P F+ + LN VS + +SI ++ A+D
Sbjct: 3628 PPQTGSATVHIELEDVNDNGPTFTTE-----------GLNGYVSENEPPGTSIMTLMASD 3676
Query: 147 AD----GDKVAYKL 156
D G Y+L
Sbjct: 3677 PDLPRNGGPFTYQL 3690
>gi|335294261|ref|XP_003357178.1| PREDICTED: protocadherin-16 [Sus scrofa]
Length = 3300
Score = 59.7 bits (143), Expect = 2e-06, Method: Composition-based stats.
Identities = 50/160 (31%), Positives = 76/160 (47%), Gaps = 19/160 (11%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+ G L +G +D E+ +Y L + A D G ++ ++TV V D NDN+P FSQ +Y+
Sbjct: 2324 RYGGRLSLTGPLDYEQRDRYHLQLLAHD--GPHQGHANLTVLVEDVNDNAPTFSQSLYQA 2381
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGELLL 174
++ + H S+I SVSATD D ++Y LA P+ + P G L
Sbjct: 2382 ML----------LEHAPPGSAILSVSATDRDSGANGHISYHLASPAEGFSVDPNNGTLFT 2431
Query: 175 TGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWLQ 210
+ E ++ +EA D +P R AR V LQ
Sbjct: 2432 AAGTAAWGHEGPGVVDVVLEARDHGTPGRVARATVHVQLQ 2471
Score = 48.1 bits (113), Expect = 0.006, Method: Composition-based stats.
Identities = 55/202 (27%), Positives = 83/202 (41%), Gaps = 20/202 (9%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V + P+ + YS+ Q +++ +P T E+
Sbjct: 1114 ENQLPGTSVG--RVFATDRDSGPNGRLTYSLRQLSEDSKVFRIHPQTGEV---------- 1161
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVG 120
T +DRE + Y L++ D ++ T V + VLD NDNSP F Q G
Sbjct: 1162 --TTLQTLDRERQSSYQLLVQVQDGGSPPRSTTGTVHITVLDLNDNSPTFLQ-ASGAAGG 1218
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGELLLTGDP- 178
L + V +++ + + + Y L P S L + P +GE LLT P
Sbjct: 1219 GLPVQVPDGVPPGTLVTTLQAKDPDAGENGTILYTLTGPGSELFSLHPHSGE-LLTAAPL 1277
Query: 179 -PSDDVEYELTVEAHDLQSPSR 199
++ Y LT+ AHD SP R
Sbjct: 1278 IRAERPHYVLTLSAHDQGSPPR 1299
Score = 47.4 bits (111), Expect = 0.008, Method: Composition-based stats.
Identities = 38/103 (36%), Positives = 48/103 (46%), Gaps = 14/103 (13%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL-------LVTSGDIDREEVAQY 77
H V YSI GN F L E R + +SG L LV +D E + QY
Sbjct: 2513 HATVDYSIVSGNRGRVFHL------EPRLAEAGESGGLGPRALGCLVLLEPLDFESLTQY 2566
Query: 78 SLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+L + A D + + VTV VLD NDN PVF++ YR V
Sbjct: 2567 NLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRVAV 2609
Score = 41.6 bits (96), Expect = 0.55, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQ 112
ST+ L+ + +DREE Y+L +TATD +AE + V D NDN+P F +
Sbjct: 413 STQDSVIYLVCVARRLDREERDAYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPTFDR 472
Query: 113 KVYR 116
++YR
Sbjct: 473 QLYR 476
Score = 40.4 bits (93), Expect = 1.2, Method: Composition-based stats.
Identities = 48/156 (30%), Positives = 70/156 (44%), Gaps = 24/156 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVK----GINKAETHVTVDVLDENDNSPVFS 111
E +SG L V + +DRE Y+L + A G A V V +L +ND+SP S
Sbjct: 1046 EPQSGWLWVRAA-LDREAQELYTLRVMAVSGSKAELGQQTATATVRVSILSQNDHSPRLS 1104
Query: 112 QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAY---KLAVPSNLVVI 165
++ V + + +S+G V ATD D ++ Y +L+ S + I
Sbjct: 1105 EEPTFLAVAE----------NQLPGTSVGRVFATDRDSGPNGRLTYSLRQLSEDSKVFRI 1154
Query: 166 VPQTGEL--LLTGDPPSDDVEYELTVEAHDLQSPSR 199
PQTGE+ L T D Y+L V+ D SP R
Sbjct: 1155 HPQTGEVTTLQTLDRERQS-SYQLLVQVQDGGSPPR 1189
Score = 38.5 bits (88), Expect = 4.3, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 17/121 (14%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
YS++ TF L E R + LV +G++DRE + Y L + A D
Sbjct: 178 YSLSGDGAGETFRL------ETRPGPDGAPVPELVVTGELDRENRSHYMLQLEAYDGGSP 231
Query: 90 -NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+A+ + V +LD ND++P F+Q Y G + SL S + V A+DAD
Sbjct: 232 PRRAQALLDVTLLDINDHAPAFNQSRYH---GTVSESLAPG-------SPVLQVYASDAD 281
Query: 149 G 149
Sbjct: 282 A 282
Score = 38.1 bits (87), Expect = 6.1, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 13/102 (12%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + + + PH L+R++++ G+ F L + SG L +
Sbjct: 2616 GAELLQVEASDADPGPHGLIRFTLSSGDPLGLFEL------------DESSGDLRLAR-P 2662
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVF 110
+D E ++ LV+ A D G + A VT++V D ND+ P F
Sbjct: 2663 LDCETQTRHQLVVQAADPAGAHFALAPVTIEVQDVNDHGPAF 2704
>gi|355750264|gb|EHH54602.1| hypothetical protein EGM_15478 [Macaca fascicularis]
Length = 720
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ K + +TV V D NDN+P F+Q Y V +
Sbjct: 400 LVTDGALDRESRAEYNITITVTDLGTPRLKTQQSITVLVSDVNDNAPAFTQTSYTLFVRE 459
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P S+LV I G
Sbjct: 460 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLSSLVSINADNGH 509
Query: 172 LLLTGDPPSDDV-EYELTVEAHDLQSPS 198
L + + E+E V A D SP+
Sbjct: 510 LFALRSLDYEALQEFEFRVGATDRGSPA 537
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 33 TQGNDNHTFALKNPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK 91
+ G ++T + NP H + RN +E + LV +DREE + +L +TA D +
Sbjct: 162 SNGLQSYTISF-NPHFHVLTRNRSEGRKFPELVLDKPLDREEQPRLTLTLTALDGGSPPR 220
Query: 92 AET-HVTVDVLDENDNSPVFSQKVY 115
+ T + + VLD NDN P F+Q++Y
Sbjct: 221 SGTSEIHIQVLDINDNIPEFAQELY 245
>gi|344265557|ref|XP_003404850.1| PREDICTED: protocadherin alpha-13-like [Loxodonta africana]
Length = 805
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 14/144 (9%)
Query: 61 VLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
V+LV +DREE+ ++SL++TATD K + ++VLD NDN+P F Q VY
Sbjct: 192 VVLVLKKSLDREEIREHSLLLTATDGGKPELTGSVKLLIEVLDVNDNAPEFDQSVYEV-- 249
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-----SNLVVIVPQTGELLL 174
SL N +W + + + ++ Y + + + I+ TGE+ L
Sbjct: 250 -----SLRENAVNWTSVIKLNASDVDEGSNQEITYHFSRDNYFRITEIFTIILNTGEIRL 304
Query: 175 TGDPPSDD-VEYELTVEAHDLQSP 197
G+ ++ + YE+ VEA D SP
Sbjct: 305 KGNLDYEEIISYEILVEAADKGSP 328
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE V Y+L++TA D + A ++V+V D NDN+P F Q Y V +
Sbjct: 407 LVLDSALDRESVWAYTLMVTARDGGSPSLSATASLSVEVADVNDNAPAFEQPEYTVFVKE 466
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKL 156
N H I +VSA DAD + V+Y L
Sbjct: 467 ----NNPPGCH------IFTVSAHDADAQENALVSYSL 494
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 63/141 (44%), Gaps = 15/141 (10%)
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKS 124
G++D EE+ Y +++ A D KG + H TV +VLD NDN+P S V L
Sbjct: 306 GNLDYEEIISYEILVEAAD-KGSPQMRGHCTVLVNVLDINDNAPEVS-------VTSLSL 357
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGD-KVAYKLA--VPSNLVVIVPQTGELLLTGDPPSD 181
+ + H + I SVS D+ + +V L VP LV L+L +
Sbjct: 358 PVREDAPHGSVIALI-SVSDRDSSANGQVTCTLMPDVPFKLVSTFKNYYSLVLDSALDRE 416
Query: 182 DV-EYELTVEAHDLQSPSRYA 201
V Y L V A D SPS A
Sbjct: 417 SVWAYTLMVTARDGGSPSLSA 437
>gi|322800567|gb|EFZ21553.1| hypothetical protein SINV_02181 [Solenopsis invicta]
Length = 1368
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 113/244 (46%), Gaps = 36/244 (14%)
Query: 69 IDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE + +++L + ATD A V V VLD+NDN P F + Y F +L +L
Sbjct: 232 LDRETLDRHALTVFATDNGSPAATASATVLVMVLDDNDNDPRFEKDFYAF---ELLENLP 288
Query: 128 SNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE 184
S + +G VSA D D K + Y + ++ + P TG+ + T +P + +
Sbjct: 289 SG-------TLVGRVSAIDPDIGKNSLLRYAVVQTNSSFAVDPDTGK-ITTREPLDREAK 340
Query: 185 --YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRR 239
+EL +EA D PSR AR P +V + NSP + D Q ++ + E P E R
Sbjct: 341 GVHELVLEARDQGIPSRAARVPLKVTVLDVNDNSPEIVDPQ-RDVVSVREEQPTGTEVAR 399
Query: 240 VTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
V RA+ +TD + +++ K+ + + + + +P G +R K
Sbjct: 400 V-RAL---------DTDLGENASVTYSISKDRDSDGYNVFTIDPI-----TGMIRTKAVL 444
Query: 300 DFEE 303
D EE
Sbjct: 445 DHEE 448
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 92/219 (42%), Gaps = 41/219 (18%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE+VA+YS+ I A K ++ T + V V+DENDNSP F S
Sbjct: 863 LDREKVARYSVPIMARSNKLLDV--TILEVIVMDENDNSPEFRPG----------SCYTL 910
Query: 129 NVSHWKKFSSIGSVSATDADGDK---VAYKLA---VPSNLVVIVPQTGELLLTGDPPSDD 182
V ++ S+I +V+ATD DG K ++Y + N V P E
Sbjct: 911 AVPENQETSAIHTVAATDLDGGKNGEISYSIVGTRAEDNCRVFDPLDRE---------RQ 961
Query: 183 VEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTR 242
Y V A D RY + + ++ N + D + E P R RV
Sbjct: 962 SSYTFFVVATD---SGRYDAKSTSIPVEINISDVNDNAPI-----FEEYPFRA---RVPV 1010
Query: 243 AVRPTK---RIDFSETDGEMEGRIVFALEKETEREKFKI 278
+P + R+ + D G IV++L E E+ KF+I
Sbjct: 1011 GTQPGQNILRVSAKDADDGANGDIVYSLINEQEKPKFRI 1049
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 92/230 (40%), Gaps = 47/230 (20%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFAL---------KNPTT--HE 50
ENS +GT + + + + Q V YSI GND HTFA+ +PT E
Sbjct: 1117 ENSAAGTEIVKITAVRTDGRR---QRVTYSIASGNDYHTFAIDEDTGLLRVNDPTRLDAE 1173
Query: 51 IRNSTESKSGVLL------------VTSGDIDREEVAQYSL----VITATDVKGINKAET 94
+ N K G L G +EE + S V+ T + + +A
Sbjct: 1174 LWNDLTVKPGTELPDDTARTNSWGRSLEGQQPKEEPRESSRHILNVVARTVSQEVLEAYV 1233
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDK 151
V + + D NDN P+F+Q Y V L N K + +SA+DAD +
Sbjct: 1234 KVIIRISDVNDNPPIFTQMQYSATV------LEGNT----KGDFVVKLSASDADQGLNSR 1283
Query: 152 VAYKL--AVPSNLVVIVPQTGELLLTGDPPSDDV--EYELTVEAHDLQSP 197
+ Y + P N I P ++ T ++ +Y LT+ A D +P
Sbjct: 1284 ILYHIVDGNPDNAFTISPPYSGVVRTNIVLDREIREKYRLTIIATDQGNP 1333
>gi|291221758|ref|XP_002730887.1| PREDICTED: FAT tumor suppressor homolog 4-like [Saccoglossus
kowalevskii]
Length = 4161
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 111/246 (45%), Gaps = 34/246 (13%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKV 114
++ SG L VT G +DRE + Y + I+A D I ++ T V +D+LD NDNSPVFS +
Sbjct: 532 DTYSGDLFVT-GILDRESIPSYVINISAYDTGNPILESYTVVIIDILDINDNSPVFSSDL 590
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT-DADGDKVAYKLAVPSNLVVIVPQTGELL 173
Y +G ++ S + S + +V AT D DG S+ I P TG+
Sbjct: 591 Y---IGSIEESAQLD-------SYVLTVRATDDDDGINANVSYYTSSSDFSIDPITGD-- 638
Query: 174 LTGDPPSDDVE------YELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQM 224
+T + D E YE TV A+D P+ + +V + N+P +
Sbjct: 639 ITTNSTDYDFEDNGKLNYEFTVYANDQGIPALTSSSSVRVQILDSNDNAPQFTESAYYGN 698
Query: 225 IDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPW 284
ID S + + R I+ S+ D + IV+ L E ++F+I + +
Sbjct: 699 IDENSLSDTTVIIDRF---------IEVSDADTGLNAAIVYTLAGEG-SDQFQIDNISGI 748
Query: 285 ITVDEN 290
IT +N
Sbjct: 749 ITTSDN 754
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 90/186 (48%), Gaps = 38/186 (20%)
Query: 2 ENSKSGTGV-KGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
ENS GT V IL + + + + YSI+ GN++ F + N K+G
Sbjct: 1021 ENSGPGTTVIMTRDILASDVDQGLNSSIVYSIS-GNNSDQFRIDN------------KTG 1067
Query: 61 VLLVTSG---DIDREEVAQYSLVITATDVKGINKAET-----HVTVDVLDENDNSPVFSQ 112
VL ++ D+DRE V Y +++TA D G+ + HVTV+ D+NDN+P F
Sbjct: 1068 VLETSNSGNLDLDRETVDFYEIILTAFDRNGMEGSRNTSVFIHVTVN--DDNDNNPAFED 1125
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVIV-PQ 168
+Y F +S +NV S+GS+ A D D D ++ Y + S+ +V
Sbjct: 1126 TLYTF-----DTSEGANVG-----DSVGSIHADDEDIDINARLTYSVIGGSDGKFVVDAD 1175
Query: 169 TGELLL 174
+GE+L+
Sbjct: 1176 SGEILV 1181
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 114/259 (44%), Gaps = 36/259 (13%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE--THVTVDVLDENDNSPVFSQKVY 115
++G + V S +DRE Y L ++ +D G+N + T V + VLD NDNSP F+ +Y
Sbjct: 855 RNGAIFVAS-QLDREHTMTYILKLSVSD-SGVNILQDFTEVEIQVLDVNDNSPTFTSDIY 912
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGEL 172
V D++ L S + + +V+A+D D + ++L I TG++
Sbjct: 913 ---VADVEEELPSG-------TYLFTVTASDPDVGRNSNILFRLNTTD--FAINDTTGDV 960
Query: 173 LLTGDPPSDDVE---YELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQMID 226
L T +D E YE V A D + +V++ N+P+ I+
Sbjct: 961 LTTTVLDYEDEENRIYEFQVFASDQGEIPMTSSVLVKVYVFDTNDNAPIFTQHVYYGNIE 1020
Query: 227 RKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWIT 286
S P V T+ I S+ D + IV+++ ++F+I ++ +
Sbjct: 1021 ENS-GPG--------TTVIMTRDILASDVDQGLNSSIVYSISGN-NSDQFRIDNKTGVLE 1070
Query: 287 VDENGDVRV-KKRWDFEEL 304
+G++ + ++ DF E+
Sbjct: 1071 TSNSGNLDLDRETVDFYEI 1089
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVF 110
S ++GV+ T G +DRE Y L +TA+D ++G A V V V D NDNSP F
Sbjct: 1696 SINERTGVITAT-GLLDREARGDYELTVTASDRDGLEGSRDATATVNVTVNDINDNSPEF 1754
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
Q Y F V + N+++ ++IG V A D D
Sbjct: 1755 LQSSYDFNVAE-----NASIH-----TTIGVVHAGDDD 1782
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 41/70 (58%), Gaps = 8/70 (11%)
Query: 48 THEIRNSTES------KSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDV 100
+ EIR+ ++ +GVL V S IDRE AQY L I+A+D + IN T V + +
Sbjct: 2976 SFEIRDGSDGDFQINRNTGVLSV-SNTIDRENKAQYILNISASDHGQPINTNFTRVVIKL 3034
Query: 101 LDENDNSPVF 110
LD NDN P+F
Sbjct: 3035 LDVNDNQPIF 3044
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 43/82 (52%), Gaps = 14/82 (17%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
+++IT GNDN F + N TT EI T+G+IDRE A +L +TA D
Sbjct: 3599 KFTITDGNDNGFFVI-NGTTGEI------------FTTGEIDRETAAYVNLEVTAHDGGT 3645
Query: 89 INKAETHVT-VDVLDENDNSPV 109
K +T V + ++D ND PV
Sbjct: 3646 PPKNDTTVVQITIIDVNDEQPV 3667
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 127/320 (39%), Gaps = 77/320 (24%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVA-----QYSLVIT 82
+ YSIT GN+ + + + E +G + S +IDRE + +Y++ +
Sbjct: 3272 IEYSITDGNNGKLYGVF---------AIEPTTGYIYANS-NIDREYNSSYCNTKYTMTVM 3321
Query: 83 ATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
A D + T V + VLD NDN P F+Q V K + N + I +
Sbjct: 3322 AQDNGSPQLNSTTGVEITVLDVNDNVPKFNQSV------PYKGWVEENALYSVD---IVT 3372
Query: 142 VSATDAD-GDKVAYKLAVPS---NLVVIVPQTGELLLTGDPPSD--DVE---YELTVEAH 192
VSATD D GD A+ S + V I P +G + T + D D E Y L ++A
Sbjct: 3373 VSATDDDEGDNARISYAIVSGGDDAVRINPDSGLIQPTWNAQIDYEDTEGRNYTLIIQAT 3432
Query: 193 DLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDF 252
D +P ++ +++ ID P+ + V V + +D+
Sbjct: 3433 DAGNPPLSSKAIVHIYV---------------IDVNDNTPYFMSNSYVAE-VSMDEPVDY 3476
Query: 253 -------SETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEELG 305
++D GRI + T E F + +E G++ ++K D +
Sbjct: 3477 LVITVLAVDSDSGENGRITYT----TNVEYFHLD--------NETGEITIQKELDTSK-- 3522
Query: 306 PEKTIDFWVTINNQATNGGP 325
DF T+ N + NG P
Sbjct: 3523 -----DFTFTV-NASDNGTP 3536
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 18/101 (17%)
Query: 56 ESKSGVLLVTSG----DIDREEVAQYSLVITATDVKGIN----KAETHVTVDVLDENDNS 107
+ K+GV+ T D+DRE+ +Y L + +D G++ +T+ +LD NDN
Sbjct: 2878 DGKTGVITATDDESVLDLDREKRDRYDLEVIVSDRDGVDDLSLSTSVPLTIVLLDVNDNY 2937
Query: 108 PVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
P FS Y + + + S +K IG +SATD D
Sbjct: 2938 PQFSHNEYYYEI------FENTTSSYK----IGVISATDID 2968
>gi|351705182|gb|EHB08101.1| Protocadherin beta-16 [Heterocephalus glaber]
Length = 753
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 64/124 (51%), Gaps = 23/124 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+YS+ IT TD+ K + ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTEGALDRESRAEYSITITVTDLGTPRLKTQHNITVQVSDVNDNAPTFTQTSYTLWVPE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP---------SNLVVIVPQT 169
NS H IG++SATD D +V Y L +P ++LV I T
Sbjct: 463 ----NNSPALH------IGTISATDRDSGTNAQVTYSLLLPPPRDPHPGLASLVSINADT 512
Query: 170 GELL 173
G+L
Sbjct: 513 GQLF 516
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGI-NKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + L +TA D + + V + VLD NDN P F Q +Y+ V +
Sbjct: 194 LVLDRALDREEQPEIRLTLTALDGGSPPSTGTSQVLILVLDINDNDPEFGQGLYKVQVPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVV----IVPQTGELLL 174
NS V S + +VSA+D D +++Y PS+ V+ I TGE+ L
Sbjct: 254 -----NSPVG-----SHVITVSASDLDTGTHGELSYSFFQPSSQVMQTFEIHTTTGEIRL 303
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+++E Y + VEA D
Sbjct: 304 KKLLDFEEIEYYHMEVEASD 323
>gi|395504748|ref|XP_003756709.1| PREDICTED: protocadherin beta-2-like [Sarcophilus harrisii]
Length = 787
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 55/101 (54%), Gaps = 14/101 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE +Y++ IT TD+ K E + TV + D NDN PVFSQ+VY+ + +
Sbjct: 402 LVTDGALDRENKEEYNITITVTDLGSPRLKTEYNFTVLISDVNDNPPVFSQRVYKLYLQE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP 159
NS H IGSVSA+D D KV Y L P
Sbjct: 462 ----NNSPALH------IGSVSASDRDSGINAKVTYSLLPP 492
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 35 GNDNHTFALKNPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI-- 89
GN++ +P +H +IR E + LV +DREE ++ L +TA D G+
Sbjct: 162 GNNSLQNYTVSPNSHFHIQIREDAEGRKYPELVLDKPLDREEQPEFRLTLTAVD-GGVPA 220
Query: 90 NKAETHVTVDVLDENDNSPVFSQKVY 115
T + V V+D NDN+PVFS Y
Sbjct: 221 KSGSTQILVLVMDINDNAPVFSHSRY 246
>gi|345328639|ref|XP_001507105.2| PREDICTED: protocadherin alpha-C2 [Ornithorhynchus anatinus]
Length = 1009
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 25/186 (13%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAET 94
N + +L P +R S + LV SG +DRE VA Y++ +TATD ++
Sbjct: 401 NQQVSLSLPTPLPFGLRGLGTSYT---LVVSGPLDRERVAAYNITVTATDAGSPPLSSQR 457
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DK 151
+ VD+ D NDN P F + VY V + + +G+V ATD D +
Sbjct: 458 TLRVDISDVNDNPPRFPRAVYSIYVPE----------NNTPGGLLGTVRATDPDARENAE 507
Query: 152 VAYKL------AVP-SNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPSRYARE 203
V Y L +P ++ V I P +G+L + + E+++TV+A DL SP +
Sbjct: 508 VTYSLLGGDIQGLPVTSFVSINPSSGDLYAVKSFDYERLREFDITVQAQDLGSPPLSSTV 567
Query: 204 PAQVWL 209
A V++
Sbjct: 568 TANVYV 573
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 57/124 (45%), Gaps = 21/124 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA---ETHVTVDVLDENDNSPVFSQKVYRFIV 119
LV +DRE A + LV+TA D G N A +TV VLD NDNSP F Q YR +
Sbjct: 213 LVLRKGLDRERDAWHRLVLTAVD--GGNPALSGTAQITVRVLDTNDNSPAFGQSTYRVQL 270
Query: 120 ------GDLKSSLNSNVSHWKKFSSIG-SVSATDADGDKVAYKLAVPSNLVVIVPQTGEL 172
G L LN++ +G S S+ ++ +K L I P TGEL
Sbjct: 271 REDAPPGTLAVKLNASDPDEGSNGQLGYSFSSYTSEREK---------QLFSIDPGTGEL 321
Query: 173 LLTG 176
+ G
Sbjct: 322 RVRG 325
>gi|194853658|ref|XP_001968202.1| GG24633 [Drosophila erecta]
gi|190660069|gb|EDV57261.1| GG24633 [Drosophila erecta]
Length = 3556
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 112/244 (45%), Gaps = 36/244 (14%)
Query: 69 IDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE +Y L + ATD A+T V V VLD NDN P F + Y F + +
Sbjct: 1111 LDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEE------ 1164
Query: 128 SNVSHWKKFSSIGSVSATDAD-GDKVA--YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE 184
+ ++ S +G V+A+D D G+ A Y L ++ + P TGE + T +P ++
Sbjct: 1165 ----NLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGE-ISTREPLDRELR 1219
Query: 185 --YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRR 239
Y+L VEA D +P R AR P ++ + N+P + D Q ++ + E P E R
Sbjct: 1220 ELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQ-EDVVSVREEQPPGTEVVR 1278
Query: 240 VTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
V RAV + D I +++ K + + + +P +G +R +
Sbjct: 1279 V-RAV---------DRDNGQNASITYSIVKGRDSDGHGLFSIDP-----SSGVIRTRVVL 1323
Query: 300 DFEE 303
D EE
Sbjct: 1324 DHEE 1327
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 62/133 (46%), Gaps = 25/133 (18%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL---LVTSGDIDREEVAQYSLV 80
P+ RY+I GN N F L +S + GVL L SG +DRE YSL+
Sbjct: 205 PYNTQRYNIVSGNVNDAFRL---------SSHIERDGVLYLDLQISGFLDRETTPGYSLL 255
Query: 81 ITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS 138
I A D G +TV++ D NDN P+F+Q Y V + N+ V +S
Sbjct: 256 IEALD-GGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPE-----NATVG-----TS 304
Query: 139 IGSVSATDADGDK 151
+ V A+D D D+
Sbjct: 305 VLQVYASDTDADE 317
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 99/227 (43%), Gaps = 46/227 (20%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG--INKAE 93
N ++L N T + + +S+SG L+ T G +DRE A Y+ ++ ATD + A
Sbjct: 1984 NARLVYSLANETQWQF--AIDSQSG-LITTVGKLDRELQASYNFMVLATDGGRYEVRSAT 2040
Query: 94 THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GD 150
V ++VLD NDN PVF + Y +G + + + + K V A DAD
Sbjct: 2041 VPVQINVLDINDNRPVFERYPY---IGQVPALIQPGQTLLK-------VQALDADLGANA 2090
Query: 151 KVAYKLAVPSNLVV----IVPQTGEL------------LL--------TGDPPSDDVEY- 185
++ Y L ++ V I P TG L LL G PP +
Sbjct: 2091 EIVYSLKAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVIARDKGTPPQSSLGLI 2150
Query: 186 ELTVEAHDLQSPS-RYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEA 231
EL + +P R+ E +V L+ NSP +LLQ++ +S+
Sbjct: 2151 ELLIGEAPQGTPVLRFQNETYRVMLKENSP--SGTRLLQVVALRSDG 2195
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 99/216 (45%), Gaps = 51/216 (23%)
Query: 12 GLPILVASSH---KHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G P+ A +H V YS+ + FA+ +++SG L +T
Sbjct: 947 GAPLYAAHAHDKDSGSSGQVSYSLVSDSGKRLFAI------------DARSGHLSLTQ-H 993
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVT--VDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E ++SL++TATD G+ T++T VDV D NDN PVF ++ Y
Sbjct: 994 LDYESSQRHSLIVTATD-GGVPSLSTNLTILVDVQDVNDNPPVFEKEEYSV--------- 1043
Query: 127 NSNVSHWKKFSS-IGSVSATDAD---GDKVAYKL----------AVPSNLVV----IVPQ 168
NVS + ++ I V+A+D D ++ Y++ ++ S+ V I P
Sbjct: 1044 --NVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPN 1101
Query: 169 TGELLLTG--DPPSDDVEYELTVEAHDLQSPSRYAR 202
+G + L D + D Y+LTV A D +P+ +A+
Sbjct: 1102 SGWIYLRAPLDRETRD-RYQLTVLATDNGTPAAHAK 1136
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 64/116 (55%), Gaps = 13/116 (11%)
Query: 63 LVTSGDI-DREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVTS + D E+ +Y + + A+D+ G KA V V++ ++ +P F+++ YRF+
Sbjct: 2922 LVTSAFVFDYEQRQRYDMELLASDMGG-KKAGVAVRVEIESRDEFTPQFTERTYRFV--- 2977
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGELLL 174
L + V+ + + +G V+ATD+D +V Y+L+ P + + +G +L+
Sbjct: 2978 ----LPAAVALPQGY-VVGQVTATDSDSGPDGRVVYQLSAPHSHFKVNRSSGAVLI 3028
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 18/95 (18%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + YSIT GN + F S +S SG L ++ +DRE+ ++Y+L I A
Sbjct: 1878 PNADLIYSITGGNLGNKF------------SIDSSSGEL--SARPLDREQHSRYTLQIQA 1923
Query: 84 TDVKGINKA---ETHVTVDVLDENDNSPVFSQKVY 115
+D +G K+ ++T+ V D+NDN+P F Y
Sbjct: 1924 SD-RGQPKSRQGHCNITIFVEDQNDNAPSFKLSKY 1957
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 73/155 (47%), Gaps = 27/155 (17%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V Y+I +G K+ T E+R S SG + + +G++D E + Y + ATD
Sbjct: 645 MVNYTIGEG-------FKHLTEFEVR----SASGEICI-AGELDFERRSSYEFPVLATDR 692
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS--IGSVSA 144
G++ + + + D NDN PVF + Y K SL + + SS I +V A
Sbjct: 693 GGLSTTAM-IKMQLTDVNDNRPVFYPREY-------KVSLRESPKAPTQASSTPIVAVVA 744
Query: 145 TDADG---DKVAYKLAV--PSNLVVIVPQTGELLL 174
TD D +V+Y++ + + I TGE+ +
Sbjct: 745 TDPDSGNFGQVSYRIVAGNEAGIFRIDRSTGEIFV 779
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 19/127 (14%)
Query: 20 SHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSL 79
+H+ P V+YSI G+ + F S E+ SG + + +D E +Q L
Sbjct: 857 AHRSP---VKYSIYSGDPDGYF------------SIETNSGNIRIAK-PLDHEAKSQVLL 900
Query: 80 VITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV---GDLKSSLNSNVSHWKKF 136
I AT + T V ++V D NDN+P F + R V +L + L + +H K
Sbjct: 901 NIQATLGEPPVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDS 960
Query: 137 SSIGSVS 143
S G VS
Sbjct: 961 GSSGQVS 967
>gi|410989771|ref|XP_004001132.1| PREDICTED: protocadherin beta-16, partial [Felis catus]
Length = 575
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 73/151 (48%), Gaps = 28/151 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DREE AQY++ IT TD+ K + ++TV V D NDN+P FSQ Y V +
Sbjct: 403 LVTKRALDREERAQYNITITVTDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H IGSVSATD D +V Y L P++ LV I G+
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGANAQVTYSLLPPADPQLPLASLVSINADNGQ 512
Query: 172 LLLTGDPPSDDVE----YELTVEAHDLQSPS 198
L S D E +E V A D SP+
Sbjct: 513 LFALR---SLDYEALRAFEFGVRAADRGSPA 540
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 21/126 (16%)
Query: 79 LVITATDVKGINK---AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK 135
+V+T T + G + V ++V+D NDN+P F Q +Y+ + + NS+V
Sbjct: 208 IVLTLTALDGGSPPRYGTAQVRIEVVDSNDNAPQFEQPIYKVQIPE-----NSHVG---- 258
Query: 136 FSSIGSVSATDADG---DKVAYKLAVP----SNLVVIVPQTGELLLTGDPPSDDVE-YEL 187
S + +VSA D D K+AY L P S + + P TGE+ L + V+ YE+
Sbjct: 259 -SLVVTVSARDLDSGVYGKIAYTLFQPSEDISKTLEVNPVTGEIQLRKQVDFETVQSYEV 317
Query: 188 TVEAHD 193
++A D
Sbjct: 318 DIKATD 323
>gi|313226794|emb|CBY21939.1| unnamed protein product [Oikopleura dioica]
Length = 780
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 94/201 (46%), Gaps = 39/201 (19%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSG-DIDREEVAQYSLVITATDVK 87
+Y+I+ G D F +++ ++ ++ G+L + +G +DREE YS+ +TA D
Sbjct: 47 KYAIS-GVDAEPFVVESRRDEDL--CSDKVCGILWLKNGITLDREEKELYSVTLTAYDSN 103
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
K E ++ ++VLDENDN P+F+ S L S K S G V A DA
Sbjct: 104 NEKKEEDNLIIEVLDENDNKPIFTAA---------SSKLQCEEST-KNGGSCGKVEAIDA 153
Query: 148 D---GDKVAYKL------------AVPSN---LVVIVPQTGELLLTGDPPS----DDVEY 185
D +V YK+ + +N + I QTGE+ L PS + EY
Sbjct: 154 DDGNAGQVEYKILPNTETWKRRGGGLETNNMGIFNIDSQTGEITLNNPGPSYWDAEQYEY 213
Query: 186 -ELTVEAHDLQSPSRYAREPA 205
E+ V A D +P + AR PA
Sbjct: 214 VEIEVTAQD--APGKGARNPA 232
>gi|195575605|ref|XP_002077668.1| GD22944 [Drosophila simulans]
gi|194189677|gb|EDX03253.1| GD22944 [Drosophila simulans]
Length = 3038
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 22/185 (11%)
Query: 69 IDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE +Y L + ATD A+T V V VLD NDN P F + Y F + +
Sbjct: 1111 LDREARDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEE------ 1164
Query: 128 SNVSHWKKFSSIGSVSATDAD-GDKVA--YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE 184
+ ++ S +G V+A+D D G+ A Y L ++ + P TGE + T +P ++
Sbjct: 1165 ----NLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGE-ISTREPLDRELR 1219
Query: 185 --YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRR 239
Y+L VEA D +P R AR P ++ + N+P + D Q ++ + E P E R
Sbjct: 1220 ELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQ-EDVVSVREEQPPGTEVVR 1278
Query: 240 VTRAV 244
V RAV
Sbjct: 1279 V-RAV 1282
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 62/133 (46%), Gaps = 25/133 (18%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL---LVTSGDIDREEVAQYSLV 80
P+ RY+I GN N F L +S + GVL L SG +DRE YSL+
Sbjct: 205 PYNTQRYNIVSGNVNDAFRL---------SSHRERDGVLYLDLQISGFLDRETTPGYSLL 255
Query: 81 ITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS 138
I A D G +TV++ D NDN P+F+Q Y V + N+ V +S
Sbjct: 256 IEALD-GGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPE-----NATVG-----TS 304
Query: 139 IGSVSATDADGDK 151
+ V A+D D D+
Sbjct: 305 VLQVYASDTDADE 317
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 108/241 (44%), Gaps = 28/241 (11%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG--INKAE 93
N ++L N T + + +S+SG L+ T G +DRE A Y+ ++ ATD + A
Sbjct: 2001 NARLVYSLANETQWQF--AIDSQSG-LITTVGKLDRELQASYNFMVLATDGGRYEVRSAT 2057
Query: 94 THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GD 150
V ++VLD NDN PVF + Y +G + + + + K V A DAD
Sbjct: 2058 VPVQINVLDINDNRPVFERYPY---IGQVPALIQPGQTLLK-------VQALDADLGANA 2107
Query: 151 KVAYKLAVPSNLVV----IVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPA 205
++ Y L ++ V I P TG L + S+ + L V A D +P + +
Sbjct: 2108 EIVYSLNAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVVARDKGTPPQSSLGLI 2167
Query: 206 QVWL---QFNSPVL--QDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEME 260
++ + +PVL Q+E M+ S + R+ + R+ +++ FS G +
Sbjct: 2168 ELLIGEAPQGTPVLRIQNETYRVMLKENSPSGTRLLQVVALRSDGRRQKVQFSFGAGNED 2227
Query: 261 G 261
G
Sbjct: 2228 G 2228
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 97/216 (44%), Gaps = 51/216 (23%)
Query: 12 GLPILVASSHKH---PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G P+ A +H V YS+ + + FA+ + H L+ S
Sbjct: 947 GAPLYAAHAHDKDSGSSGQVTYSLVKDSGKGLFAIDARSGH-------------LILSQH 993
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVT--VDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +++L++TATD G+ T++T VDV D NDN PVF ++ Y
Sbjct: 994 LDYESSQRHTLIVTATD-GGVPSLSTNLTILVDVQDVNDNPPVFEKEEYSV--------- 1043
Query: 127 NSNVSHWKKFSS-IGSVSATDAD---GDKVAYKL----------AVPSNLVV----IVPQ 168
NVS + ++ I V+A+D D ++ Y++ ++ S+ V I P
Sbjct: 1044 --NVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPN 1101
Query: 169 TGELLLTG--DPPSDDVEYELTVEAHDLQSPSRYAR 202
+G + L D + D Y+LTV A D +P+ +A+
Sbjct: 1102 SGWIYLRAPLDREARD-RYQLTVLATDNGTPAAHAK 1136
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 62/108 (57%), Gaps = 15/108 (13%)
Query: 56 ESKSGVLLVTSGDI-DREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKV 114
+S+SG LVTS + D E+ +Y + + A+D+ G KA V V++ ++ +P F+++
Sbjct: 2934 DSESG--LVTSAFVFDYEQRQRYDMELLASDMGG-KKASVAVRVEIESRDEFTPQFTERT 2990
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP 159
YRF+ L + V+ + + +G V+ATD+D +V Y+L+ P
Sbjct: 2991 YRFV-------LPAAVALPQGY-VVGQVTATDSDSGPDGRVVYQLSAP 3030
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 36/163 (22%)
Query: 2 ENSKSGTGVKGLPILVASS-HKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
ENS+ G + +VAS + P+ + YSIT GN + F S +S+SG
Sbjct: 1876 ENSEPGV----IHTVVASDLDEGPNADLIYSITGGNLGNKF------------SIDSRSG 1919
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKA---ETHVTVDVLDENDNSPVFSQKVYRF 117
L ++ +DRE+ ++Y+L I A+D +G K+ ++T+ V D+NDN+P RF
Sbjct: 1920 EL--SARPLDREQNSRYTLQIQASD-RGQPKSRQGHCNITIFVEDQNDNAP-------RF 1969
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA 157
+ S+ + +S+ +SA DAD ++ Y LA
Sbjct: 1970 KLSKYTGSVQEDAPLG---TSVVQISAVDADLGVNARLVYSLA 2009
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 41/83 (49%), Gaps = 14/83 (16%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN--KA 92
G D H FAL +T S L++ +DRE V+ Y+L + ATD KG A
Sbjct: 439 GGDGH-FAL----------TTRDNSIYLVIVHLPLDREIVSNYTLSVVATD-KGTPPLHA 486
Query: 93 ETHVTVDVLDENDNSPVFSQKVY 115
+ + + D NDNSP F Q +Y
Sbjct: 487 SKSIFLRITDVNDNSPEFEQDLY 509
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 27/155 (17%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V Y+I +G K+ T E+R S SG + + +G++D E + Y + ATD
Sbjct: 645 MVNYTIGEG-------FKHLTEFEVR----SASGEICI-AGELDFERRSSYEFPVLATDR 692
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS--IGSVSA 144
G++ + + + D NDN PVF + Y K SL + + SS I +V A
Sbjct: 693 GGLSTT-AMIKMQLTDVNDNRPVFYPREY-------KVSLRESPKAPSQASSTPIVAVVA 744
Query: 145 TDAD-GD--KVAYKLAV--PSNLVVIVPQTGELLL 174
TD D G+ +V+Y++ + + I TGE+ +
Sbjct: 745 TDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEIFV 779
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 81/191 (42%), Gaps = 42/191 (21%)
Query: 19 SSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYS 78
++H+ P VRYSI G+ + F S E+ SG + + + +D E +Q
Sbjct: 856 AAHRSP---VRYSIYSGDPDGYF------------SIETNSGNIRI-AKPLDHEAKSQVL 899
Query: 79 LVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV---GDLKSSLNSNVSHWKK 135
L I AT + T V ++V D NDN+P F + R V +L + L + +H K
Sbjct: 900 LNIQATLGEPPVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKD 959
Query: 136 FSSIGSVSATDADGDKVAYKLAVPS--NLVVIVPQTGELLLTGDPPSDDVEYE------L 187
S G +V Y L S L I ++G L+L S ++YE L
Sbjct: 960 SGSSG----------QVTYSLVKDSGKGLFAIDARSGHLIL-----SQHLDYESSQRHTL 1004
Query: 188 TVEAHDLQSPS 198
V A D PS
Sbjct: 1005 IVTATDGGVPS 1015
>gi|126290920|ref|XP_001377464.1| PREDICTED: protocadherin beta-2-like [Monodelphis domestica]
Length = 790
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 76/160 (47%), Gaps = 22/160 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT D+ K E ++T+ + D NDN PVF+Q Y+ + +
Sbjct: 403 LVTEGALDRERRAEYNITITVMDLGSPRLKTEHNITIWISDINDNPPVFTQTTYKLYLQE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H IGSVSA D D KV Y L P N + I G
Sbjct: 463 ----NNSPALH------IGSVSAKDRDSGINAKVTYSLLPPENGDLPLFSYISINSDNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ 210
L + ++ ++ TV A D SPS ++ QV +Q
Sbjct: 513 LYALRSLDYETIQVFQFTVTATDGGSPSLSSQALVQVVVQ 552
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 60/109 (55%), Gaps = 16/109 (14%)
Query: 45 NPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI--NKAETHVTVD 99
+P +H +I++S++ + LV + +DREE+++ L++TA D G+ V V
Sbjct: 173 SPNSHFHSQIQDSSKGRIYPELVLNKALDREELSEILLILTAVD-GGVPPRSGSAQVRVI 231
Query: 100 VLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
++D NDN+P+F Q Y + ++ N+S K + +VSATD D
Sbjct: 232 IVDINDNAPIFIQSQY-------EVQISENISVGSK---VVTVSATDLD 270
>gi|61316301|ref|NP_001013039.1| protocadherin beta-10 precursor [Pan troglodytes]
gi|62510891|sp|Q5DRD9.1|PCDBA_PANTR RecName: Full=Protocadherin beta-10; Short=PCDH-beta-10; Flags:
Precursor
Length = 798
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 57/105 (54%), Gaps = 14/105 (13%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V
Sbjct: 402 ILITEGALDRELRAEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVR 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNL 162
+ NS H IGSVSATD D +V Y L P +L
Sbjct: 462 E----NNSPALH------IGSVSATDGDSGTNAQVTYSLLPPQDL 496
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET 94
G N+T + + +I S E LV +DREE + SL +TA D +++ T
Sbjct: 166 GIQNYTISPNSFFHIKISGSDEGMIYPELVLDKALDREEQEELSLTLTALDGGSPSRSGT 225
Query: 95 H-VTVDVLDENDNSPVFSQKVY 115
V + VLD NDN+P F+Q +Y
Sbjct: 226 STVRIVVLDVNDNAPQFAQALY 247
>gi|301753533|ref|XP_002912596.1| PREDICTED: protocadherin beta-16-like [Ailuropoda melanoleuca]
Length = 796
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 95/197 (48%), Gaps = 32/197 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DREE AQY++ IT TD+ K + ++TV V D NDN+P FSQ Y V +
Sbjct: 403 LVTERALDREERAQYNITITVTDLGTPRLKTQHNLTVTVSDVNDNAPAFSQSSYTLRVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP--------SNLVVIVPQTG 170
NS H IGSVSATD D +V Y L +P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDAGANAQVTYSLLLPPHDPHLPLASLVSINADNG 512
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ----- 220
+L + ++ +E V A D SP+ ++ +V + N+P VL Q
Sbjct: 513 QLFALRALDYEALQAFEFGVRAADRGSPALSSQALVRVLVVDDNDNAPFVLYPLQNGSAP 572
Query: 221 LLQMIDRKSEAPHRIEK 237
+++ R +EA + + K
Sbjct: 573 CTELVPRAAEAGYLVTK 589
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 27/144 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV ++DRE + L +TA D + T V ++V+D NDN+P F Q +Y+
Sbjct: 194 LVLEEELDREVEPEIVLTLTALDGGSPPRYGTAQVLIEVVDSNDNAPEFGQPIYKV---- 249
Query: 122 LKSSLNSNVSHWKKFSSIGS----VSATDADG---DKVAYKLAVP----SNLVVIVPQTG 170
H + S +GS VSA+D D K++Y L P S + + P TG
Sbjct: 250 ----------HIPENSPVGSLVVTVSASDLDSGIYGKISYTLFQPSEDISKTLEVNPVTG 299
Query: 171 ELLLTGDPPSDDV-EYELTVEAHD 193
E+ L + V YE+ ++A D
Sbjct: 300 EIRLKKQVDFETVLSYEVDIKATD 323
>gi|432104084|gb|ELK30914.1| Protocadherin Fat 4 [Myotis davidii]
Length = 1859
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 91/193 (47%), Gaps = 35/193 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+RYSI+ GN+ FA+ S +GVL + +D E ++ + I+ATD
Sbjct: 4 LIRYSISSGNEEGIFAIN------------SSTGVLTLAKA-LDYELCQKHEMTISATDG 50
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + VTV+VLD NDNSPVF + Y V + + +++ ++AT
Sbjct: 51 GWVARTGSCSVTVNVLDVNDNSPVFLPEEYFPTV----------LENAPSGTTVIHLNAT 100
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
DAD +AY + + S+L VI P TG L G D E Y LTV+A ++
Sbjct: 101 DADSGTNAVIAYTVQSSDSDLFVIDPNTGVLTTQG---FLDFETKQSYHLTVKAFNVPDE 157
Query: 198 SRYAREPAQVWLQ 210
R + V L+
Sbjct: 158 ERCSFATVNVQLK 170
>gi|321479216|gb|EFX90172.1| hypothetical protein DAPPUDRAFT_6 [Daphnia pulex]
Length = 3261
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 114/252 (45%), Gaps = 52/252 (20%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSL 126
+DRE +Y+L + ATD G+ TV+V D NDN PVF++ VY+F + +
Sbjct: 1011 LDREMRDRYTLTVVATD-NGLPPGSAAATVNVFVNDANDNDPVFTRDVYQFTIEE----- 1064
Query: 127 NSNVSHWKKFSSIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSD-- 181
+ +K + +G VSATD D D A Y L + + TGE+ G P D
Sbjct: 1065 -----NLEKGALVGVVSATDKDLDANAALRYSLLPVNGSFQLNSLTGEIFTKG--PLDRE 1117
Query: 182 -DVEYELTVEAHDLQSPSRYAREPAQVW---LQFNSPVL--QDEQLLQMIDRKSEAPHRI 235
+EL +E D +P R A+ +V + N+PV+ +E +L + + E P
Sbjct: 1118 AKAVHELQIEVKDQGNPPRSAKAIVRVMVTDVNDNTPVIVEPEETVLSV---REELPAGT 1174
Query: 236 EKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWI---TVDEN-G 291
E R+ RAV +TD I ++ F I D+ + T+DE+ G
Sbjct: 1175 EVVRI-RAV---------DTDEGNNASITYS---------FVIGDDTDGLEAFTIDESTG 1215
Query: 292 DVRVKKRWDFEE 303
+R K D EE
Sbjct: 1216 TIRTKVTLDHEE 1227
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 75/138 (54%), Gaps = 22/138 (15%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D E QY+L + A+D+ I ET +TV+VLDENDN+PVFS + YR + +L
Sbjct: 2283 LDHERQQQYTLRVQASDMAHI--TETSITVNVLDENDNAPVFSVQNYRASLPELT----- 2335
Query: 129 NVSHWKKFSSIGSVSATDAD---GDKVAYKLAV-PSNLVVIVPQTGELL----LTGDPPS 180
+ ++ S++ATDAD +V Y LA+ P++ I +TG + LT +P
Sbjct: 2336 -----EPGYAVLSINATDADKGENARVRYSLAISPTDAFYISEETGVIYTNQTLTFNPRQ 2390
Query: 181 DDVEYELTVEAHDLQSPS 198
+ +L V+A D PS
Sbjct: 2391 PVL--QLVVKAQDRGRPS 2406
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 66/137 (48%), Gaps = 30/137 (21%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL---LVTSGDIDREEVAQYSLVITATD 85
RY+I GN N+ F L +S + GVL L +G +DRE A YSLVI A D
Sbjct: 134 RYNIISGNTNNAFRL---------SSHRERDGVLYLDLQINGFLDRETTAFYSLVIEALD 184
Query: 86 VKGIN---KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
G N + V + + D NDN P+F+Q Y V + N+ + +S+ V
Sbjct: 185 --GGNPPLRGFMTVNITIQDVNDNQPIFNQSRYFASVAE-----NATIG-----TSVLQV 232
Query: 143 SATDAD-GD--KVAYKL 156
ATD D GD ++ Y +
Sbjct: 233 FATDTDAGDNGRITYSI 249
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 80/182 (43%), Gaps = 34/182 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI GN++ F+L + SGVL VT +DRE +Y+L +TATD
Sbjct: 1513 VSYSIVSGNEDGAFSL------------DVASGVLAVTR-PLDRESQNRYALNVTATDHG 1559
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+A V + V D NDN P F + +Y V + NS + + VSATD
Sbjct: 1560 RPARASWQLVHIHVEDINDNPPRFVRPLYEAAVAE-----NSPAGTF-----VVKVSATD 1609
Query: 147 AD-GDKVAYKLAVP----SNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSPS 198
D G A+P + + P TG + TG P D Y +T+ D P+
Sbjct: 1610 KDVGTNGNLTYAIPEGIADGMFSVDPTTGAVTTTG--PLDRERKSSYIVTIYVRDGSFPA 1667
Query: 199 RY 200
+Y
Sbjct: 1668 QY 1669
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 61/127 (48%), Gaps = 24/127 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN N TF + T +LLV + +DREE++ ++L + A D
Sbjct: 2463 IDYSIENGNINSTFQI-----------TSDTGEILLVKT--VDREEISVFNLKVLAMDRG 2509
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+ T V + V D NDN PVF+Q +Y V + ++ +++ V+ATD
Sbjct: 2510 SPARNSTADVVIHVDDVNDNPPVFNQTLYEVKVSEAQA----------IGTALLRVAATD 2559
Query: 147 ADGDKVA 153
D D+ A
Sbjct: 2560 RDHDENA 2566
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 113/270 (41%), Gaps = 27/270 (10%)
Query: 40 TFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN----KAETH 95
T++L N T + ++++GVL T+G DRE Y+ + ATD + KA+ H
Sbjct: 1828 TYSLSNETQWLFK--IDNETGVL-TTTGHFDRERRGSYTFEVRATDGGRYDARSEKAQIH 1884
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYK 155
+T + D NDN PVF + Y F D+ + N ++ I + + G +V Y
Sbjct: 1885 IT--ITDVNDNKPVFVK--YPF-AADVPAFTQPN----QQLLQIVAEDKDEGPGGEVVYS 1935
Query: 156 LA-VPSNLVV-IVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQFN 212
L PSN I P TG + T + + L V A D SPS + ++ +
Sbjct: 1936 LINQPSNSKFRIHPSTGVVTATNSLTMESGRLFHLEVLATDKGSPSLSSTGLIEIRVGMG 1995
Query: 213 SPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETE 272
D Q+ R A + ++ + ++ +DG + R+ ++ E
Sbjct: 1996 EAGSSDVP-SQVALRFQNATYHVQLGENAPVGKDVIQVSAVRSDGRRQ-RVTYSFGSGNE 2053
Query: 273 REKFKIRDENPWITVDENGDVRVKKRWDFE 302
F+I N I VR +KR DFE
Sbjct: 2054 ENTFEINSNNGLIR------VRDQKRLDFE 2077
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 74/163 (45%), Gaps = 39/163 (23%)
Query: 2 ENSKSGTGVKGLPILVASSH-----KHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTE 56
EN+ +GT +V ++H + P+ ++YSI G F + +PTT I
Sbjct: 2650 ENAPAGT-------VVFTAHANDMDRGPYGKLKYSIAGGEGKDHFNI-DPTTGTI----- 2696
Query: 57 SKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYR 116
VT D E +Y L I A+DV G A +V +DV ++ +P F++ YR
Sbjct: 2697 -------VTQSVFDYEAKNRYYLSIQASDVGG-QTASVNVQIDVESRDEFAPEFTESSYR 2748
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL 156
F V +++V + +IG V ATD D +V Y L
Sbjct: 2749 FSVPS-----DADVGY-----AIGKVLATDRDKGTDGRVVYHL 2781
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
VRY+I GN+ F + E SG + +T + R +A + L I+ATD
Sbjct: 673 VRYAIVAGNEEGLFRV------------EMSSGEVFLTQ-PLTRARLA-HRLNISATDGG 718
Query: 88 GINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
G+ A + V V V+D N P+F Y F V + ++ S IG+VSA+
Sbjct: 719 GLRSAHDAEVLVTVIDSNHQPPIFENNRYLFSVRE----------DAQRNSVIGTVSASS 768
Query: 147 ADG-DKVAYKL--AVPSNLVVIVPQTG 170
G D Y + P+ I P TG
Sbjct: 769 VTGSDTARYSIYSGDPNGYFSINPVTG 795
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 73/174 (41%), Gaps = 28/174 (16%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
RYSI G+ N F++ NP T IR +TE +D E L + A +
Sbjct: 776 RYSIYSGDPNGYFSI-NPVTGVIRTNTE------------LDHETHPFVLLNVAAMTGEP 822
Query: 89 INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ V + + D NDN+P F V + V + + + S I + A D D
Sbjct: 823 PTFGHSQVNITIGDVNDNAPEFDTVVVKISVAE----------NAELGSPIYAAHAHDDD 872
Query: 149 -GDK--VAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSP 197
GD V Y+L P L I P+ G ++LT + + Y L + A D SP
Sbjct: 873 SGDNGAVIYQLLTNPDGLFKIDPRQGFIMLTRKLDFETTQKYALVIGAQDKGSP 926
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 25/101 (24%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y++ GN +F + T G L V +IDRE VAQY+L VK
Sbjct: 1300 VTYTLLSGNAYGSFDINKTT------------GALFVAR-EIDREAVAQYTL-----QVK 1341
Query: 88 GINKAETH-------VTVDVLDENDNSPVFSQKVYRFIVGD 121
++ + TH + +DV+D ND +P F+ F V +
Sbjct: 1342 AVDSSVTHPQSNIINIKIDVVDVNDCAPSFNADPVVFSVSE 1382
>gi|312374399|gb|EFR21960.1| hypothetical protein AND_15952 [Anopheles darlingi]
Length = 3475
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 106/269 (39%), Gaps = 45/269 (16%)
Query: 36 NDNHTFALKNPTTHEIRN--STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE 93
N N T+ T I N S +S +G + V +G +DRE ++ L + A D G + E
Sbjct: 1158 NANATYIF----TENIGNKFSIDSTTGNVTV-AGHLDRELQDEFILKVAAVD--GAWRTE 1210
Query: 94 THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----G 149
T +T+ + D+NDN+P F Y F +L+ K +G V ATD D
Sbjct: 1211 TPLTITIQDQNDNAPEFEHSYYSFNFPELQ----------KPIQFVGQVIATDRDKQGPN 1260
Query: 150 DKVAYKLAVPSNLVVIVPQTGELLL--------TGDPPSDDVEYELTVEAHDLQSPSRYA 201
++Y L PS++ I P TGEL T PS + + LTV A D P Y
Sbjct: 1261 SVISYSLQQPSDMFSIDPATGELFSKRRIHYKHTQMFPSPENMFSLTVLATDNGKPPMYT 1320
Query: 202 REPAQVWL---QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGE 258
V + N PV L + + RI + I E D
Sbjct: 1321 ECLVNVNIVDANNNPPVFSQTSYLAPAPKGATVGQRI-----------LQLIAKDELDFG 1369
Query: 259 MEGRIVFALEKETEREKFKIRDENPWITV 287
+ I + + +F + + W+ V
Sbjct: 1370 VNAEIEYQVMGGNGSSRFAVNKLDGWVVV 1398
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 108/277 (38%), Gaps = 63/277 (22%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVD---------------------- 99
LL +DRE V+ Y L ++ TD GI ET +TV
Sbjct: 41 LLKLRDTLDRESVSSYRLTVSVTD--GIQSTETTITVQLETNGRLEREPTAAVADSRGHG 98
Query: 100 -----VLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVA 153
V D NDN PVF++ Y F + + + ++ +G + ATD D G A
Sbjct: 99 GPQHPVTDTNDNPPVFAEPAYSFDIPE----------NAQRGYHVGVIQATDPDIGTNAA 148
Query: 154 YKLAVPS----NLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVW 208
V S ++ + PQTG LT ++V+ Y L V+A D PS + +
Sbjct: 149 VTYTVISDWANDVFSLNPQTGIFTLTARLDYEEVQHYILVVQAQDNGFPSL----SSTLT 204
Query: 209 LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALE 268
+ N L D + D S + E + P + ++ D GR+ +++
Sbjct: 205 VYCNVIDLNDNA--PIFDPMSYSNEIFENAPIN---SPVVTVSATDIDSGANGRVEYSIT 259
Query: 269 KETEREKFKIRDENPWITVDENGDVRVKKRWDFEELG 305
E+E F+I NG +R ++ D E G
Sbjct: 260 AGDEKEDFQIM---------SNGTIRTRRMLDRETKG 287
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 6/97 (6%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LL SG +DRE A Y L + A D +K+ ++ + ++VLDENDNSP+F K Y +
Sbjct: 413 LLRVSGSLDREIKAAYDLQVVAKDRGDPSKSTQSRIRINVLDENDNSPIFDPKQYSAAIA 472
Query: 121 DLKSSLNSNV----SHWKKFSSIGSVSATDADGDKVA 153
+ +S+ ++V SH + S++ D D V+
Sbjct: 473 E-NASIGASVLQVGSHHEFTPRSASINGGPGDQDLVS 508
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 75/175 (42%), Gaps = 27/175 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV- 86
+RY+I GN + + SG + V G +D E QY + I A D
Sbjct: 953 IRYAIAGGNIGEALRIN------------ANSGEVTVNRGGLDYERNQQYEVWIEAADSD 1000
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+ ++ + V+V D NDN+PV Q+VY V + +S I VSATD
Sbjct: 1001 RPSLRSVLQLIVNVTDANDNAPVMDQQVYVAEVMEEES----------PSQLIAKVSATD 1050
Query: 147 ADGD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSP 197
AD D ++ Y L I TGE+ T +++ Y LTV+A D P
Sbjct: 1051 ADSDENGQITYHLRDDFEAFEINTDTGEIYTTVRLDREEMAFYTLTVDAVDQGVP 1105
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 60/138 (43%), Gaps = 26/138 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
++ YSIT G F ++ P T I + T D EE +Y+L++ A +
Sbjct: 1583 IIVYSITGGTGKELFTIE-PGTGVISSRTT------------FDYEEQDRYTLIVGAANP 1629
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+ + ET V V + N+ P F Q V+ F V + + SS+GS+ ATD
Sbjct: 1630 DSVMRNETKVIVHITGVNEYYPKFVQPVFHFDVSE----------SAEIGSSVGSIQATD 1679
Query: 147 ADG---DKVAYKLAVPSN 161
D KV Y L SN
Sbjct: 1680 KDAGEDGKVYYLLVGSSN 1697
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ +V YSI GN+ + F++ H + + +V +D + V Y L I+A
Sbjct: 1475 PNGMVHYSILAGNERNDFSV-----HTVTGA--------IVIRQPLDYDLVQLYQLNISA 1521
Query: 84 TDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
D+ +K VT+ + D NDN+P F+Q +Y + +
Sbjct: 1522 EDLGYKSKKSIALVTITLTDINDNAPYFNQSLYNAYIAE 1560
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQ 112
+ T+ +DREE+A Y+L + A D +G+ + V V+VLD+NDN P F++
Sbjct: 1079 IYTTVRLDREEMAFYTLTVDAVD-QGVPQLTGSAAVLVNVLDKNDNPPKFTR 1129
>gi|395817724|ref|XP_003782306.1| PREDICTED: protocadherin Fat 2 [Otolemur garnettii]
Length = 4316
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 41/212 (19%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G PIL+ S+ V Y + +GN + F++ S SG L+ T ++D
Sbjct: 1675 GSPILLVSATSSSE--VTYELREGNKDGVFSMN------------SYSG-LISTQKNLDH 1719
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E+++ Y L I +++ G + V VD++DENDN+P+F LKS+ +S
Sbjct: 1720 EKISSYHLKIRGSNMAG-TFTDVMVLVDIIDENDNAPMF-----------LKSTFVGQIS 1767
Query: 132 HWKKFSSI--------GSVSATDADGDK---VAYKLAVPSNL--VVIVPQTGELLLTGDP 178
S+ + A+D+D + + YK+ P L I P G L + +
Sbjct: 1768 EAAPLYSMIMDNNNNPFVIHASDSDKEANSLLVYKILEPEALKFFKIDPSMGTLTIVSEM 1827
Query: 179 PSDDV-EYELTVEAHDLQSPSRYAREPAQVWL 209
+ + ++ +V HD SP +A PAQV +
Sbjct: 1828 DYETMPSFQFSVYVHDQGSPILFAPRPAQVII 1859
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 73/162 (45%), Gaps = 28/162 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLV 80
P VRY I G+ + F + +R T+S + LL +RE Y+L+
Sbjct: 65 PQWAVRYRIISGDVANVFKTEEYVVGNFCFLRIRTKSSNTALL------NREVRDSYTLI 118
Query: 81 ITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD---LKSSLNSNVSHWKKFS 137
+ AT+ +A THV V +LD+ND P+FS YR + D LK S
Sbjct: 119 VQATEKTLELEALTHVVVRILDQNDLKPLFSPPSYRVTISDDMPLK-------------S 165
Query: 138 SIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTG 176
I V+ATDAD + A Y L S + I P +G + + G
Sbjct: 166 PICKVTATDADLGQNAEFYYALNTRSEMFAIHPTSGVVTVAG 207
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 87/199 (43%), Gaps = 31/199 (15%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS+ G V L L A + Q+ Y IT+G+ F + E R S+
Sbjct: 2917 VENSEPGEPVVTLKTLDADISEQNRQVTCY-ITEGDPLGQFGISQ-VGDEWRISSRKT-- 2972
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+DRE A+Y L ITA+D G +A V + VLD NDNSP SQ +Y G
Sbjct: 2973 --------LDREHTAKYLLRITASD--GKFQASVTVEIFVLDVNDNSPQCSQLLY---TG 3019
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-SNLVVIVPQTGEL--LL 174
++ + K F ATD D D ++ Y L P + + P TGEL L
Sbjct: 3020 KVREDVFPGHLILKVF-------ATDLDTDTNGQITYSLHGPGAQEFKLDPHTGELTTLT 3072
Query: 175 TGDPPSDDVEYELTVEAHD 193
D DV Y L +A D
Sbjct: 3073 ALDRERKDV-YSLIAKATD 3090
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 22/166 (13%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN+ F + E ++G+L V S +D E Y L +T D+
Sbjct: 751 YVIADGNEEGCFDI------------ELETGLLTVAS-PLDYEVTNFYILNVTVFDLGTP 797
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K+ +TV+V D NDN+P RF G + +++ + + + + A D
Sbjct: 798 QKSSWKLLTVNVKDWNDNAP-------RFPPGGYQLTISEDAEVGTTIAELKTEDADSED 850
Query: 149 GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDD-VEYELTVEAHD 193
+V Y L P+ + P TGEL++TG + +Y L VEA D
Sbjct: 851 NGRVRYTLLSPTEKFSLHPLTGELVVTGHLDRESQPQYILKVEARD 896
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
+T+ K+GVL VT G +D E ++ + ATD + +E V V V D NDN P F Q
Sbjct: 2216 TTDFKTGVLSVT-GPLDYESKTKHVFTVRATDTALGSFSEATVEVLVEDINDNPPTFPQL 2274
Query: 114 VY 115
VY
Sbjct: 2275 VY 2276
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 34/172 (19%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+ T+ +D + A Y L I + G+ + T V +D++D N+++P+F++ Y
Sbjct: 413 LITTTKLLDFHDRAHYQLHIRTS--PGL--SSTTVVIDIVDCNNHAPIFNRSSY------ 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDP 178
+L+ N+ +S+ +V+ATD D + + Y +A P + + ++ T P
Sbjct: 463 -DGTLDENI---PPGTSVLTVAATDRDHGENGFITYSIAAPKAVPFSIDPYLGIISTSKP 518
Query: 179 PSDDVEYELT-------VEAHDLQSPSRYAREPAQVWLQF-----NSPVLQD 218
++YEL V A D SP R +E V LQ N PV ++
Sbjct: 519 ----MDYELMRRIYTFRVRASDWGSPFRREKE-VSVSLQLKNLNDNQPVFEE 565
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 18/89 (20%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQK------- 113
LL T+ +DRE ++ L +T D + K+ + V V V D NDN PVFS K
Sbjct: 1192 LLSTARQLDRENKDEHILEVTVLDNGEPSLKSTSRVVVCVSDINDNPPVFSHKLFKVRLP 1251
Query: 114 ----------VYRFIVGDLKSSLNSNVSH 132
VYR + D +NS V++
Sbjct: 1252 ERLSPVSPGPVYRLVASDADEGINSKVTY 1280
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 4/78 (5%)
Query: 33 TQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA 92
T N T++L P E + + L T +DRE YSL+ ATD G
Sbjct: 3041 TDTNGQITYSLHGPGAQEFKLDPHTGE---LTTLTALDRERKDVYSLIAKATDGGG-RSC 3096
Query: 93 ETHVTVDVLDENDNSPVF 110
+ VT+ V D NDN+P F
Sbjct: 3097 QADVTLHVEDVNDNAPRF 3114
>gi|194389122|dbj|BAG61578.1| unnamed protein product [Homo sapiens]
Length = 658
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 86/185 (46%), Gaps = 28/185 (15%)
Query: 30 YSITQGNDNHT----FALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
+S++ + H +++N +R S E+ LVT G +DRE A+Y++ IT TD
Sbjct: 230 FSVSDADSGHNQQVICSIENNLPFLLRPSVENF--YTLVTEGALDRESRAEYNITITVTD 287
Query: 86 VKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+ K + +TV V D NDN+P F+Q Y V + NS H IGSVSA
Sbjct: 288 LGTPRLKTQQSITVQVSDVNDNAPAFTQTSYTLFVRE----NNSPALH------IGSVSA 337
Query: 145 TDADGD---KVAYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
TD D +V Y L P S+LV I G L + ++ +E V A D
Sbjct: 338 TDRDSGINAQVTYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATD 397
Query: 194 LQSPS 198
SP+
Sbjct: 398 RGSPA 402
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 12/91 (13%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
L RY+I+ NP H + RN +E + LV +DREE Q L + A D
Sbjct: 30 LQRYTIS----------SNPHFHVLTRNRSEGRKFPELVLDKPLDREEQPQLRLTLIALD 79
Query: 86 VKGINKAET-HVTVDVLDENDNSPVFSQKVY 115
++ T + + +LD NDN P F+Q++Y
Sbjct: 80 GGSPPRSGTSEIQIQILDINDNVPEFAQELY 110
>gi|313241423|emb|CBY43772.1| unnamed protein product [Oikopleura dioica]
Length = 780
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 93/201 (46%), Gaps = 39/201 (19%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSG-DIDREEVAQYSLVITATDVK 87
+Y+I+ G D F +++ + ++ G+L + +G +DREE YS+ +TA D
Sbjct: 47 KYAIS-GVDAEPFVVESKRDENL--CSDKVCGILWLKNGITLDREEKELYSVTLTAYDSN 103
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
K E ++ ++VLDENDN P+F+ S L S K S G V A DA
Sbjct: 104 NEKKEEDNLIIEVLDENDNKPIFTAA---------SSKLQCEEST-KNGGSCGKVEAIDA 153
Query: 148 D---GDKVAYKL------------AVPSN---LVVIVPQTGELLLTGDPPS----DDVEY 185
D +V YK+ + +N + I QTGE+ L PS + EY
Sbjct: 154 DDGNAGQVEYKILPNTETWKRRGGGLETNNMGIFNIDSQTGEITLNNPGPSYWDAEQYEY 213
Query: 186 -ELTVEAHDLQSPSRYAREPA 205
E+ V A D +P + AR PA
Sbjct: 214 VEIEVTAQD--APGKGARNPA 232
>gi|426245749|ref|XP_004016666.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Ovis aries]
Length = 3155
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 76/160 (47%), Gaps = 19/160 (11%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+ G L +G +D E+ +Y L + A D G ++ ++TV V D NDN+P FSQ +Y+
Sbjct: 2228 RYGGRLSLTGPLDFEQRDRYHLQLLAHD--GPHEGRANLTVLVEDVNDNAPAFSQTLYQV 2285
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLL 174
++ + H S+I SVSATD D V+Y LA P+ I P G L
Sbjct: 2286 ML----------LEHTPPGSAILSVSATDRDSGANGHVSYHLASPAEGFSIDPNNGTLFT 2335
Query: 175 TGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWLQ 210
T + E ++ +EA D P R AR V LQ
Sbjct: 2336 TVGTVALGHEGPGMVDVVLEARDHGVPGRAARATVHVQLQ 2375
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVIT 82
H V YSI GN F L+ P E S L LV +D E + QY+L +
Sbjct: 2417 HATVDYSIVSGNRGRVFQLE-PRLAEAGESDGLGPRALGCLVLLEPLDFESLTQYNLTVA 2475
Query: 83 ATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
ATD + + VTV VLD NDN PVF++ YR V
Sbjct: 2476 ATDRGQPPRSSAVPVTVSVLDVNDNPPVFTRAAYRVAV 2513
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 6/135 (4%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE + Y L++ D ++ T V + VLD NDNSP F Q G L +
Sbjct: 1167 LDRERQSSYQLLVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTFLQ-ASGAAGGGLPIQVP 1225
Query: 128 SNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGELLLTGDP--PSDDVE 184
V +++ + + + + Y L P S L + P +GE LLT P ++
Sbjct: 1226 DGVPPGTLVTTLQAKDPDEGENGTILYILTGPGSELFSLHPHSGE-LLTAAPLIRAERPH 1284
Query: 185 YELTVEAHDLQSPSR 199
Y LT+ AHD SP R
Sbjct: 1285 YVLTLSAHDQGSPPR 1299
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 25/131 (19%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LVR++++ G+ F L + SG L + +D E A++ LV+ A
Sbjct: 2535 PHGLVRFTLSSGDPLGLFEL------------DESSGDLRLAR-PLDCETQARHQLVVQA 2581
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G + A VT++V D ND+ P F + L +SL N +++ ++
Sbjct: 2582 ADPAGAHFALAPVTIEVQDVNDHGPAFPLSL-------LSTSLAENQPPGTLVTTLHAI- 2633
Query: 144 ATDADGDKVAY 154
DGD A+
Sbjct: 2634 ----DGDAGAF 2640
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 102/270 (37%), Gaps = 47/270 (17%)
Query: 43 LKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDV 100
L P++ E+R +T +DRE+ Y+ + A D T VT+ V
Sbjct: 1805 LLEPSSGELRTATT------------LDREQCPSYAFTVNAVDSAAAGPLSTTVPVTITV 1852
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA 157
D ND++P F R + L++ + ++ A D D + Y+LA
Sbjct: 1853 RDVNDHAPTFPTSPLRLRLPRPGPVLSTPT------LPLATLRAEDRDAGANASILYRLA 1906
Query: 158 -VPSNLVVIVPQTGELLLTGDP----PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFN 212
P + TGE+ ++ P P D V L + A DL P+R A V LQ
Sbjct: 1907 GTPPPGTTVDSYTGEIRVSRSPVSLSPRDRV---LFIVATDLGRPARSATGVVIVGLQGE 1963
Query: 213 SPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETE 272
S E + SEA R T V P K I G G I +++ E
Sbjct: 1964 S-----EHGPRFPRTSSEAMLRENAPPGTPVVSP-KAIHA----GGSSGPITYSILSGNE 2013
Query: 273 REKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ F I+ IT VR + DFE
Sbjct: 2014 KGTFSIQPSTGAIT------VRSAEGLDFE 2037
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 404 EGGEGH-FAL----------STQDSVIYLVCVARRLDREERDAYNLRVTATDSGSPPLRA 452
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + V D NDN+P F +++YR
Sbjct: 453 EAAFVLHVTDVNDNAPAFDRQLYR 476
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ TF L E R + LV +G++DRE + Y L + A D
Sbjct: 178 YALSGDGAGETFRL------ETRPGPDGAPVPELVVTGELDRENRSHYMLQLEAYDGGSP 231
Query: 90 -NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+A+ + V +LD ND++P F+Q Y V
Sbjct: 232 PRRAQALLDVTLLDINDHAPAFNQSRYHAAV 262
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHV-TVDVLDENDNSPVFSQKVYRFIV 119
+DRE+ A+Y L + A+D ++ T + TV V D ND +P F Q Y ++
Sbjct: 1509 LDREQRAEYVLTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQLEYSVLL 1560
>gi|24580686|ref|NP_523446.2| dachsous [Drosophila melanogaster]
gi|22945533|gb|AAF51468.3| dachsous [Drosophila melanogaster]
Length = 3556
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 22/185 (11%)
Query: 69 IDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE +Y L + ATD A+T V V VLD NDN P F + Y F + +
Sbjct: 1111 LDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEE------ 1164
Query: 128 SNVSHWKKFSSIGSVSATDAD-GDKVA--YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE 184
+ ++ S +G V+A+D D G+ A Y L ++ + P TGE + T +P ++
Sbjct: 1165 ----NLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGE-ISTREPLDRELR 1219
Query: 185 --YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRR 239
Y+L VEA D +P R AR P ++ + N+P + D Q ++ + E P E R
Sbjct: 1220 ELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQ-EDVVSVREEQPPGTEVVR 1278
Query: 240 VTRAV 244
V RAV
Sbjct: 1279 V-RAV 1282
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 62/133 (46%), Gaps = 25/133 (18%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL---LVTSGDIDREEVAQYSLV 80
P+ RY+I GN N F L +S + GVL L SG +DRE YSL+
Sbjct: 205 PYNTQRYNIVSGNVNDAFRL---------SSHRERDGVLYLDLQISGFLDRETTPGYSLL 255
Query: 81 ITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS 138
I A D G +TV++ D NDN P+F+Q Y V + N+ V +S
Sbjct: 256 IEALD-GGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPE-----NATVG-----TS 304
Query: 139 IGSVSATDADGDK 151
+ V A+D D D+
Sbjct: 305 VLQVYASDTDADE 317
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 46/227 (20%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG--INKAE 93
N ++L N T + + + +SG L+ T G +DRE A Y+ ++ ATD + A
Sbjct: 1984 NARLVYSLANETQWQF--AIDGQSG-LITTVGKLDRELQASYNFMVLATDGGRYEVRSAT 2040
Query: 94 THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GD 150
V ++VLD NDN P+F + Y +G + + + + K V A DAD
Sbjct: 2041 VPVQINVLDINDNRPIFERYPY---IGQVPALIQPGQTLLK-------VQALDADLGANA 2090
Query: 151 KVAYKLAVPSNLVV----IVPQTGEL------------LL--------TGDPPSDDVEY- 185
++ Y L ++ V I P TG L LL G+PP +
Sbjct: 2091 EIVYSLNAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVVARDKGNPPQSSLGLI 2150
Query: 186 ELTVEAHDLQSPS-RYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEA 231
EL + +P R+ E +V L+ NSP +LLQ++ +S+
Sbjct: 2151 ELLIGEAPQGTPVLRFQNETYRVMLKENSP--SGTRLLQVVALRSDG 2195
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 69/123 (56%), Gaps = 15/123 (12%)
Query: 56 ESKSGVLLVTSGDI-DREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKV 114
+S+SG LVTS + D E+ +Y + + A+D+ G KA V V++ ++ +P F+++
Sbjct: 2917 DSESG--LVTSAFVFDYEQRQRYDMELLASDMGG-KKASVAVRVEIESRDEFTPQFTERT 2973
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGE 171
YRF+ L + V+ + + +G V+ATD+D +V Y+L+ P + + +G
Sbjct: 2974 YRFV-------LPAAVALPQGY-VVGQVTATDSDSGPDGRVVYQLSAPHSHFKVNRSSGA 3025
Query: 172 LLL 174
+L+
Sbjct: 3026 VLI 3028
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 51/216 (23%)
Query: 12 GLPILVASSH---KHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G P+ A +H V YS+ + + FA+ + H L+ S
Sbjct: 947 GAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFAIDARSGH-------------LILSQH 993
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVT--VDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +++L++TATD G+ T++T VDV D NDN PVF + Y
Sbjct: 994 LDYESSQRHTLIVTATD-GGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSV--------- 1043
Query: 127 NSNVSHWKKFSS-IGSVSATDAD---GDKVAYKL----------AVPSNLVV----IVPQ 168
NVS + ++ I V+A+D D ++ Y++ ++ S+ V I P
Sbjct: 1044 --NVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPN 1101
Query: 169 TGELLLTG--DPPSDDVEYELTVEAHDLQSPSRYAR 202
+G + L D + D Y+LTV A D +P+ +A+
Sbjct: 1102 SGWIYLRAPLDRETRD-RYQLTVLATDNGTPAAHAK 1136
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 31/140 (22%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + YSIT GN + F S +S SG L ++ +DRE+ ++Y+L I A
Sbjct: 1878 PNADLIYSITGGNLGNKF------------SIDSSSGEL--SARPLDREQHSRYTLQIQA 1923
Query: 84 TDVKGINKA---ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG 140
+D +G K+ ++T+ V D+NDN+P RF + S+ + +S+
Sbjct: 1924 SD-RGQPKSRQGHCNITIFVEDQNDNAP-------RFKLSKYTGSVQEDAPLG---TSVV 1972
Query: 141 SVSATDAD---GDKVAYKLA 157
+SA DAD ++ Y LA
Sbjct: 1973 QISAVDADLGVNARLVYSLA 1992
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 23/153 (15%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V Y+I +G K+ T E+R S SG + + +G++D E + Y + ATD
Sbjct: 645 MVNYTIGEG-------FKHLTEFEVR----SASGEICI-AGELDFERRSSYEFPVLATDR 692
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
G++ + + + D NDN PVF + Y+ L+ S S + I +V ATD
Sbjct: 693 GGLSTTAM-IKMQLTDVNDNRPVFYPREYKV---SLRES--PKASSQASSTPIVAVVATD 746
Query: 147 AD-GD--KVAYKLAV--PSNLVVIVPQTGELLL 174
D G+ +V+Y++ + + I TGE+ +
Sbjct: 747 PDYGNFGQVSYRIVAGNEAGIFRIDRSTGEIFV 779
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 79/190 (41%), Gaps = 42/190 (22%)
Query: 20 SHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSL 79
+H+ P VRYSI G+ + F S E+ SG + + +D E +Q L
Sbjct: 857 AHRSP---VRYSIYSGDPDGYF------------SIETNSGNIRIAK-PLDHEAKSQVLL 900
Query: 80 VITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV---GDLKSSLNSNVSHWKKF 136
I AT + T V ++V D NDN+P F + R V +L + L + +H K
Sbjct: 901 NIQATLGEPPVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDS 960
Query: 137 SSIGSVSATDADGDKVAYKLAVPS--NLVVIVPQTGELLLTGDPPSDDVEYE------LT 188
S G +V Y L S L I ++G L+L S ++YE L
Sbjct: 961 GSSG----------QVTYSLVKESGKGLFAIDARSGHLIL-----SQHLDYESSQRHTLI 1005
Query: 189 VEAHDLQSPS 198
V A D PS
Sbjct: 1006 VTATDGGVPS 1015
>gi|297477316|ref|XP_002689274.1| PREDICTED: protocadherin beta-6 [Bos taurus]
gi|358413160|ref|XP_001253387.2| PREDICTED: protocadherin beta-6 [Bos taurus]
gi|296485244|tpg|DAA27359.1| TPA: protocadherin beta 6 [Bos taurus]
Length = 797
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DREE A+Y++ IT TD+ K E ++TV V D NDN+P FSQ Y V +
Sbjct: 403 LVTEGALDREERAEYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFSQTSYTLWVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYK-------LAVPSNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L ++LV I P G
Sbjct: 463 ----NNSPALH------IGSVSATDTDAGANAQVTYSLLPPPDPLVPLASLVSINPDNGH 512
Query: 172 LL-LTGDPPSDDVEYELTVEAHDLQSPS 198
L LT +E V A D SP+
Sbjct: 513 LFALTSLDYEALRAFEFHVGATDRGSPA 540
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 15/117 (12%)
Query: 45 NPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLD 102
NP H + RN + + LV +DREE + L +TA D + T + + VLD
Sbjct: 176 NPHFHILTRNRKDGRKSPELVLDKALDREEQPELRLTLTALDGGSPSLSGTTEIQILVLD 235
Query: 103 ENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
NDN+P F+Q+ Y V + SSL S V +VSA D D +V+Y L
Sbjct: 236 SNDNAPEFAQEFYEAQVPE-NSSLGSLVI---------TVSARDLDAGSFGEVSYAL 282
>gi|25090185|sp|Q24292.3|DS_DROME RecName: Full=Protein dachsous; AltName: Full=Adherin; Flags:
Precursor
Length = 3503
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 22/185 (11%)
Query: 69 IDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE +Y L + ATD A+T V V VLD NDN P F + Y F + +
Sbjct: 1058 LDRETRDRYQLTVLATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEE------ 1111
Query: 128 SNVSHWKKFSSIGSVSATDAD-GDKVA--YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE 184
+ ++ S +G V+A+D D G+ A Y L ++ + P TGE + T +P ++
Sbjct: 1112 ----NLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGE-ISTREPLDRELR 1166
Query: 185 --YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRR 239
Y+L VEA D +P R AR P ++ + N+P + D Q ++ + E P E R
Sbjct: 1167 ELYDLVVEARDQGTPVRSARVPVRIHVSDVNDNAPEIADPQ-EDVVSVREEQPPGTEVVR 1225
Query: 240 VTRAV 244
V RAV
Sbjct: 1226 V-RAV 1229
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 62/133 (46%), Gaps = 25/133 (18%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL---LVTSGDIDREEVAQYSLV 80
P+ RY+I GN N F L +S + GVL L SG +DRE YSL+
Sbjct: 152 PYNTQRYNIVSGNVNDAFRL---------SSHRERDGVLYLDLQISGFLDRETTPGYSLL 202
Query: 81 ITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS 138
I A D G +TV++ D NDN P+F+Q Y V + N+ V +S
Sbjct: 203 IEALD-GGTPPLRGFMTVNITIQDVNDNQPIFNQSRYFATVPE-----NATVG-----TS 251
Query: 139 IGSVSATDADGDK 151
+ V A+D D D+
Sbjct: 252 VLQVYASDTDADE 264
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 46/227 (20%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG--INKAE 93
N ++L N T + + + +SG L+ T G +DRE A Y+ ++ ATD + A
Sbjct: 1931 NARLVYSLANETQWQF--AIDGQSG-LITTVGKLDRELQASYNFMVLATDGGRYEVRSAT 1987
Query: 94 THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GD 150
V ++VLD NDN P+F + Y +G + + + + K V A DAD
Sbjct: 1988 VPVQINVLDINDNRPIFERYPY---IGQVPALIQPGQTLLK-------VQALDADLGANA 2037
Query: 151 KVAYKLAVPSNLVV----IVPQTGEL------------LL--------TGDPPSDDVEY- 185
++ Y L ++ V I P TG L LL G+PP +
Sbjct: 2038 EIVYSLNAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVVARDKGNPPQSSLGLI 2097
Query: 186 ELTVEAHDLQSPS-RYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEA 231
EL + +P R+ E +V L+ NSP +LLQ++ +S+
Sbjct: 2098 ELLIGEAPQGTPVLRFQNETYRVMLKENSP--SGTRLLQVVALRSDG 2142
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 69/123 (56%), Gaps = 15/123 (12%)
Query: 56 ESKSGVLLVTSGDI-DREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKV 114
+S+SG LVTS + D E+ +Y + + A+D+ G KA V V++ ++ +P F+++
Sbjct: 2864 DSESG--LVTSAFVFDYEQRQRYDMELLASDMGG-KKASVAVRVEIESRDEFTPQFTERT 2920
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGE 171
YRF+ L + V+ + + +G V+ATD+D +V Y+L+ P + + +G
Sbjct: 2921 YRFV-------LPAAVALPQGY-VVGQVTATDSDSGPDGRVVYQLSAPHSHFKVNRSSGA 2972
Query: 172 LLL 174
+L+
Sbjct: 2973 VLI 2975
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 51/216 (23%)
Query: 12 GLPILVASSH---KHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G P+ A +H V YS+ + + FA+ + H L+ S
Sbjct: 894 GAPLYAAHAHDKDSGSSGQVTYSLVKESGKGLFAIDARSGH-------------LILSQH 940
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVT--VDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +++L++TATD G+ T++T VDV D NDN PVF + Y
Sbjct: 941 LDYESSQRHTLIVTATD-GGVPSLSTNLTILVDVQDVNDNPPVFEKDEYSV--------- 990
Query: 127 NSNVSHWKKFSS-IGSVSATDAD---GDKVAYKL----------AVPSNLVV----IVPQ 168
NVS + ++ I V+A+D D ++ Y++ ++ S+ V I P
Sbjct: 991 --NVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSQHFGIFPN 1048
Query: 169 TGELLLTG--DPPSDDVEYELTVEAHDLQSPSRYAR 202
+G + L D + D Y+LTV A D +P+ +A+
Sbjct: 1049 SGWIYLRAPLDRETRD-RYQLTVLATDNGTPAAHAK 1083
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 36/163 (22%)
Query: 2 ENSKSGTGVKGLPILVASS-HKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
ENS+ G + +VAS + P+ + YSIT GN + F S +S SG
Sbjct: 1806 ENSEPGV----IHTVVASDLDEGPNADLIYSITGGNLGNKF------------SIDSSSG 1849
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKA---ETHVTVDVLDENDNSPVFSQKVYRF 117
L ++ +DRE+ ++Y+L I A+D +G K+ ++T+ V D+NDN+P RF
Sbjct: 1850 EL--SARPLDREQHSRYTLQIQASD-RGQPKSRQGHCNITIFVEDQNDNAP-------RF 1899
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA 157
+ S+ + +S+ +SA DAD ++ Y LA
Sbjct: 1900 KLSKYTGSVQEDAPLG---TSVVQISAVDADLGVNARLVYSLA 1939
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 23/153 (15%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V Y+I +G K+ T E+R S SG + + +G++D E + Y + ATD
Sbjct: 592 MVNYTIGEG-------FKHLTEFEVR----SASGEICI-AGELDFERRSSYEFPVLATDR 639
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
G++ + + + D NDN PVF + Y+ L+ S S + I +V ATD
Sbjct: 640 GGLSTTAM-IKMQLTDVNDNRPVFYPREYKV---SLRES--PKASSQASSTPIVAVVATD 693
Query: 147 AD-GD--KVAYKLAV--PSNLVVIVPQTGELLL 174
D G+ +V+Y++ + + I TGE+ +
Sbjct: 694 PDYGNFGQVSYRIVAGNEAGIFRIDRSTGEIFV 726
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 79/190 (41%), Gaps = 42/190 (22%)
Query: 20 SHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSL 79
+H+ P VRYSI G+ + F S E+ SG + + +D E +Q L
Sbjct: 804 AHRSP---VRYSIYSGDPDGYF------------SIETNSGNIRIAK-PLDHEAKSQVLL 847
Query: 80 VITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV---GDLKSSLNSNVSHWKKF 136
I AT + T V ++V D NDN+P F + R V +L + L + +H K
Sbjct: 848 NIQATLGEPPVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKDS 907
Query: 137 SSIGSVSATDADGDKVAYKLAVPS--NLVVIVPQTGELLLTGDPPSDDVEYE------LT 188
S G +V Y L S L I ++G L+L S ++YE L
Sbjct: 908 GSSG----------QVTYSLVKESGKGLFAIDARSGHLIL-----SQHLDYESSQRHTLI 952
Query: 189 VEAHDLQSPS 198
V A D PS
Sbjct: 953 VTATDGGVPS 962
>gi|167526868|ref|XP_001747767.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773871|gb|EDQ87507.1| predicted protein [Monosiga brevicollis MX1]
Length = 8735
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 14/127 (11%)
Query: 92 AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK 151
A + + VL NDNSP+F Q ++ V N++V +++ + ATD DGD
Sbjct: 4173 ATCEIILSVLPVNDNSPLFEQSFFQLTV-------NTSVPVG---TTLVVLEATDGDGDV 4222
Query: 152 VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQF 211
VAY+L PS V+ +G L L + P+ + +EL V A D Q+P A +V L
Sbjct: 4223 VAYRLREPSPYFVVDAASGALRLIAELPALEPRFELFVIASDQQTPPLEATAIVEVLL-- 4280
Query: 212 NSPVLQD 218
PV++D
Sbjct: 4281 --PVVRD 4285
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIV 119
DRE VAQY+++I TD G T T+ D+LD NDN+P+F +YR +V
Sbjct: 6035 FDREAVAQYNVLINITD-AGSPALSTLATIKLDILDVNDNTPIFEASLYRVVV 6086
Score = 40.8 bits (94), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 13/80 (16%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE A Y+LV+ ++ +A+ ++ V D NDN+P FS ++++F S+
Sbjct: 5832 LDREARASYALVVAMEVLEFSLEAQVYIVVS--DVNDNAPQFSMEIFQF-------SVME 5882
Query: 129 NVSHWKKFSSIGSVSATDAD 148
NV+ IG+VSATD D
Sbjct: 5883 NVAGVV----IGTVSATDPD 5898
>gi|380796719|gb|AFE70235.1| protocadherin-16 precursor, partial [Macaca mulatta]
Length = 1815
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 50/154 (32%), Positives = 75/154 (48%), Gaps = 23/154 (14%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+G +D E+ +Y L + A D G ++ ++TV V D NDN+P FSQ +Y+ ++
Sbjct: 851 TGPLDFEQCDRYQLQLLAHD--GPHEGRANLTVLVEDVNDNAPAFSQSLYQVML------ 902
Query: 126 LNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGELLLT------G 176
+ H S+I SVSATD D ++Y LA P++ + P G L G
Sbjct: 903 ----LEHTPPGSAILSVSATDRDSGANGHISYHLASPADGFSVDPNNGTLFTIVGTVALG 958
Query: 177 DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQ 210
S V ++ +EA D +P R AR V LQ
Sbjct: 959 HDGSGAV--DVVLEARDHGTPGRAARATVHVQLQ 990
Score = 43.9 bits (102), Expect = 0.100, Method: Composition-based stats.
Identities = 62/218 (28%), Positives = 87/218 (39%), Gaps = 45/218 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y + G D H F L S +G L V +DRE+ A++ L + A+D
Sbjct: 97 VSYRLASGGDGH-FRL------------HSSTGALSVVQ-PLDREQRAEHVLTVVASDHG 142
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
++ T V TV V D ND +P F Q+ Y ++ + NS +S+ ++ ATD
Sbjct: 143 SPPRSATQVLTVSVADVNDEAPTFQQQEYSVLLRE-----NSAPG-----TSLLTLRATD 192
Query: 147 AD---GDKVAYKLAVPSNLVVIVPQTGEL-LLTGDPPSDDVEYELTVEAHDLQSPSRYAR 202
D +V Y V S + P TG L L + E LTV A D SP +
Sbjct: 193 PDLGANGQVTYG-GVSSGSFSLDPDTGVLTTLRALDREEQEEINLTVYAQDRGSPPQLTH 251
Query: 203 EPAQV---------------WLQFNSPVLQDEQLLQMI 225
+V L P QD Q L M+
Sbjct: 252 ATIRVAVEDENDHAPTFGSTHLSLEVPEGQDPQTLTML 289
Score = 43.5 bits (101), Expect = 0.13, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 13/102 (12%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + + + PH LVR++++ G+ + F L + SG L +
Sbjct: 1135 GAELLHVEASDADPGPHGLVRFTVSSGDPSGLFEL------------DESSGTLRLAHA- 1181
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVF 110
+D E A++ LV+ A D G + A VT++V D ND+ P F
Sbjct: 1182 LDCETQARHQLVVQAADPAGAHFALAPVTIEVQDVNDHGPAF 1223
>gi|194219820|ref|XP_001502241.2| PREDICTED: protocadherin beta-15 [Equus caballus]
Length = 795
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/196 (33%), Positives = 93/196 (47%), Gaps = 31/196 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVTSG +DRE A+Y++ IT TD+ K E +TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTSGALDRESRAEYNITITVTDMGTPRLKTEHSITVLVSDVNDNAPAFTQTSYTLWVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D ++ Y L P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDAGANAQLTYSLLPPQDPHLPLASLVSINADNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ-----L 221
L + ++ +E V A D SP+ ++ +V + NSP VL Q
Sbjct: 513 LFALRSLDYEALQAFEFGVGATDRGSPALSSQARVRVLVLDANDNSPFVLYPLQNGSAPC 572
Query: 222 LQMIDRKSEAPHRIEK 237
+++ R +EA + + K
Sbjct: 573 TELVPRAAEAGYLVTK 588
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 4/89 (4%)
Query: 35 GNDNHTFALKNPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK 91
GN+N NP +H R+ + + LV ++DREE A+ L +TA D +
Sbjct: 163 GNNNIQNYDINPNSHFHVSTRDRGDGRKYPELVLDKELDREEQAELRLTLTALDGGSPPR 222
Query: 92 AET-HVTVDVLDENDNSPVFSQKVYRFIV 119
+ T V + VLD NDN+P F+Q +Y+ V
Sbjct: 223 SGTAQVRILVLDVNDNAPEFAQTLYQVQV 251
>gi|326936441|ref|XP_003214262.1| PREDICTED: putative protocadherin beta-18-like, partial [Meleagris
gallopavo]
Length = 463
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 59/103 (57%), Gaps = 15/103 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHV-TVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE+ A+YS+++TA D + +H TVD+ D NDN+PVF+Q Y V +
Sbjct: 50 LVTVSALDREKTARYSVIVTAADAGSPRLSSSHTFTVDISDVNDNAPVFNQTSYTMYVHE 109
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSN 161
+NV +G+V ATDAD KV+Y L VP++
Sbjct: 110 ------NNVPALL----VGAVKATDADAGANGKVSYSL-VPAH 141
>gi|410925618|ref|XP_003976277.1| PREDICTED: protocadherin gamma-A10-like [Takifugu rubripes]
Length = 534
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 90/184 (48%), Gaps = 35/184 (19%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
RY I Q NDN ++ N V LV +DRE+ + +L++TA D
Sbjct: 154 RY-ILQKNDNFILSVDNKK-------------VELVLENRLDREKQKEMNLLLTALDGGS 199
Query: 89 INKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
++ T V V VLD NDN+PVFSQ VY K+SL N + + VSATDA
Sbjct: 200 PQRSGTVVIHVTVLDANDNAPVFSQAVY-------KASLPEN---SPLDTVVMQVSATDA 249
Query: 148 D----GDKVAYKLAVPS----NLVVIVPQTGELLLTGDPP-SDDVEYELTVEAHDLQSPS 198
D GD V Y L S N+ +I +TGE+ ++G ++ +E+ V+A D +
Sbjct: 250 DEGVNGD-VIYNLGHSSEDDANIFIINAKTGEIRVSGTVDFEENNSFEMRVQAKDGLGLT 308
Query: 199 RYAR 202
YA+
Sbjct: 309 SYAK 312
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT+G +DRE V+ Y++ I+ATD ++ ++T + + V D NDN PVF ++ Y V
Sbjct: 384 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKT-LHLSVADINDNPPVFEEESYSAYVS 442
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + + S++ SVSA D D
Sbjct: 443 E----------NNRAGSTLCSVSAGDPD 460
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 32/204 (15%)
Query: 37 DNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHV 96
D+ + N T EIR SG +D EE + + + A D G+ + V
Sbjct: 267 DDANIFIINAKTGEIR------------VSGTVDFEENNSFEMRVQAKDGLGLT-SYAKV 313
Query: 97 TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK----- 151
+DV D+NDNSP + V L + + +VS S +G ++ D D +K
Sbjct: 314 VIDVTDKNDNSP-------QIKVKSLTNPVPEDVSPG---SEVGIINVQDRDSEKNGKVR 363
Query: 152 VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPSRYAREPAQVW-- 208
+ + VP LV + L+ TG + V +Y +T+ A D SP + + +
Sbjct: 364 CSIQQNVPFKLVPSIKNYYSLVTTGQLDRELVSDYNITISATDEGSPPLSSSKTLHLSVA 423
Query: 209 -LQFNSPVLQDEQLLQMIDRKSEA 231
+ N PV ++E + + A
Sbjct: 424 DINDNPPVFEEESYSAYVSENNRA 447
>gi|119514228|gb|ABL75891.1| protocadherin 2G16 [Takifugu rubripes]
Length = 942
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 81/149 (54%), Gaps = 20/149 (13%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVT-VDVLDENDNSPVFSQ 112
+T SK G LL+ ++DREE L +TA D ++ T V V VLD NDN+PVFSQ
Sbjct: 182 NTGSKYGELLLEK-ELDREEQKDMKLKLTALDGGSPQRSGTVVIHVTVLDANDNAPVFSQ 240
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPS----NLVVI 165
+Y + + SS+N+ V +VSATDAD +V Y+ + S N+ +
Sbjct: 241 ALYSATLPE-NSSMNTPVI---------TVSATDADEGINGEVTYEFSRISEKSRNMFSL 290
Query: 166 VPQTGELLLTGDPPSDDVE-YELTVEAHD 193
TGE+ +TG+ +D + YE+ VEA D
Sbjct: 291 NQHTGEITVTGNIDYEDGQKYEVFVEAKD 319
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 20/178 (11%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+ +G+ID E+ +Y + + A D G++ +ET V +D+ D NDN+PV +Y V L
Sbjct: 297 ITVTGNIDYEDGQKYEVFVEAKDGYGLS-SETKVIIDITDVNDNAPV----IY---VKSL 348
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDADGD-----KVAYKLAVPSNLVVIVPQTGELLLTGD 177
K + +VS S +G ++ D D + + + + VP LV + L+ TG
Sbjct: 349 KDPVAEDVSPG---SEVGIINVQDRDSENNRQVRCSIQQNVPFKLVPSIKNYYSLVTTGQ 405
Query: 178 PPSDDV-EYELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEA 231
+ V +Y +T+ A D SP + + + + N PV ++E + + A
Sbjct: 406 LDRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESYSAYVSENNRA 463
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 59/105 (56%), Gaps = 10/105 (9%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIV- 119
LVT+G +DRE V+ Y++ I+ATD ++ ++T + + V D NDN PVF ++ Y V
Sbjct: 400 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKT-LHLSVADINDNPPVFEEESYSAYVS 458
Query: 120 -----GDLKSSLNSNVSHWKKFSS-IGSVSATDADGDKVAYKLAV 158
G S+++ W++ + I S+ A + +G V+ ++V
Sbjct: 459 ENNRAGSTLCSVSAGDPDWRQNGTVIYSLLAAEVNGAPVSSYVSV 503
>gi|301753539|ref|XP_002912598.1| PREDICTED: protocadherin beta-16-like [Ailuropoda melanoleuca]
Length = 799
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 95/197 (48%), Gaps = 32/197 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ K + +++V V D NDN+P FSQ Y V +
Sbjct: 405 LVTEGALDRETQAEYNITITVTDLGTPRLKTQHNLSVTVSDVNDNAPAFSQSSYTLRVRE 464
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP--------SNLVVIVPQTG 170
NS H IGSVSATD D +V Y L +P ++LV I G
Sbjct: 465 ----NNSPALH------IGSVSATDRDAGANAQVTYSLLLPPHDPHLPLASLVSINADNG 514
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ----- 220
+L + ++ +E V A D SP+ ++ +V + N+P VL Q
Sbjct: 515 QLFALRALDYEALQAFEFGVRAADRGSPALSSQALVRVLVVDDNDNAPFVLYPLQNGSAP 574
Query: 221 LLQMIDRKSEAPHRIEK 237
+++ R +EA + + K
Sbjct: 575 CTELVPRAAEAGYLVTK 591
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 28/173 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ + H F RN ++ + LV +DREE ++ L +TA D
Sbjct: 172 YTISTNSHFHLFT---------RNHSDGRRYPELVLEKVLDREEQSELRLTLTALDGGSP 222
Query: 90 NKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ T V + VLD NDN+P F+Q +Y+ + + NS + S + +V+A D D
Sbjct: 223 PRTGTSQVVIVVLDINDNAPEFAQLLYKVQIPE-----NSPIG-----SHVITVTARDLD 272
Query: 149 G---DKVAYKLAVPSNLVV----IVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
+++Y SN V+ I TGE+ L ++++ Y + +EA D
Sbjct: 273 AGTHGELSYSFFQSSNQVIQAFEINTVTGEIRLKKLLDFEEIQSYHMEIEASD 325
>gi|432880945|ref|XP_004073728.1| PREDICTED: protocadherin Fat 2-like [Oryzias latipes]
Length = 4001
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 98/222 (44%), Gaps = 35/222 (15%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G P++ S+ V Y I GN N TF L NP T L+ +D
Sbjct: 1800 GTPVVTVSASSP--AAVHYGIESGNTNGTFYL-NPYTG------------LISIQKHLDF 1844
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E+ Y L + A+ G ++T V++ V+DENDN+P F Q Y+ G + S + N
Sbjct: 1845 EDHESYRLEVAASTTAGA-LSKTFVSIYVIDENDNAPRFQQSEYQ---GHISESAHVNSM 1900
Query: 132 HWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVV--IVPQTGEL-LLTGDPPSDDVEY 185
+ ++ V A+DAD + Y++ P L V I P G + L++ EY
Sbjct: 1901 VMGQSNAPLVVHASDADRGFNSLLTYQILEPEALRVFQIDPSMGTISLVSAVDFEAKAEY 1960
Query: 186 ELTVEAHDLQSPSRYAREPAQVWL----------QFNSPVLQ 217
TV+ D S A +PA+V + QF +PVLQ
Sbjct: 1961 HFTVQVKDSGELSLRAAKPAKVTVRILDLNDCAPQFATPVLQ 2002
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 25/192 (13%)
Query: 26 QLVRYSITQGNDNHTFALK-NPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ + S++ N TF++K N + + + K+G++ VT+ D E+ +Y + A
Sbjct: 514 HVAKVSVSSVPYNVTFSMKSNSDSSDFK--INPKTGII-VTAAKFDYEKKDRYEFDVVAN 570
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+AETH+ V++ DENDNSP+F+Q Y +++L+ N SS+ V+A
Sbjct: 571 H----GEAETHLVVEITDENDNSPLFTQTSY-------QATLDENTPVG---SSVVKVTA 616
Query: 145 TDADGDK---VAYKLAVPSNL-VVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSP- 197
D+D K V Y +A L I P TG +L + D + Y L V A D SP
Sbjct: 617 WDSDKGKNGFVTYSIAHSDPLPFTIDPFTGVILTSEHLDFELANRLYHLRVWASDSGSPF 676
Query: 198 SRYAREPAQVWL 209
S+ + P + L
Sbjct: 677 SQVSECPVTITL 688
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 49/264 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+VRY I G+ F + + +SGV+ TS +DRE V Y L + ATD+
Sbjct: 1193 VVRYHIHDGSGLGVFTI------------DEESGVIR-TSELLDRETVPHYWLSVFATDL 1239
Query: 87 KGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
THV ++VLD NDN+P SQ +Y +S+ NV +K +S+ +SAT
Sbjct: 1240 GTEPLVSWTHVFLEVLDVNDNAPQLSQPIYF-------ASVQENV---EKVNSVIQLSAT 1289
Query: 146 DADGD---KVAYKLAVPSNLVV-IVPQTGEL-LLTGDPPSDDVEYELTVEAHDLQSPSRY 200
D D K+++++ + I P+TG + L + E+ + V D +P+
Sbjct: 1290 DVDVSSEGKLSFQMLESHRVYFDIDPKTGVISTLAALDREEKPEHSIEVVVSDNAAPA-- 1347
Query: 201 AREPAQVWLQF-----NSPVLQDEQL-LQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSE 254
R A V ++ N P D+ +Q+++R+ ++ KR V R V S+
Sbjct: 1348 LRSTATVVIKVLDSNDNRPKFTDKLFHVQLLERRWQS----GKRDVCRVVA-------SD 1396
Query: 255 TDGEMEGRIVFALEKETEREKFKI 278
D + + L+ ++ E+F+I
Sbjct: 1397 EDEGSNAVVTYKLQDNSD-ERFQI 1419
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 120/287 (41%), Gaps = 63/287 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSIT+GN + F++ +P T GV+ V S D + Y L++ A+D
Sbjct: 2027 VSYSITEGNLHQAFSI-HPNT-----------GVISV-SNVTDFQPF--YQLLVRASD-- 2069
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G+ K V V+V + D+ F Q+VY ++ VS + ++ +++A
Sbjct: 2070 GLYKDSAVVKVNVTNLTDSDLQFQQRVY-----------SAGVS--ENLKAVQTLAALKV 2116
Query: 148 DG----DKVAYKLAVPSNLVVIVPQTGELLLTG---DPPSDDVEYELTVEAHDLQSPSRY 200
G + + Y + P I +G L TG D DV Y++TV+ D++ P R
Sbjct: 2117 SGCFLNEPLLYSIINPMGKFKISQTSGVLETTGVAFDREEQDV-YDITVKVQDMRDPPRT 2175
Query: 201 AREPAQVWL---QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDG 257
A +V++ NSP + MI SE + + ++D
Sbjct: 2176 ATTQVKVFIDDVNDNSPQFLNLPFSMMISEDSEPGDVLYQATAI------------DSDQ 2223
Query: 258 EMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEEL 304
G I+++L E F WI D GD+ +KK DFE L
Sbjct: 2224 GENGSIIYSL-----VEDFDFF----WIDPDV-GDISLKKPLDFEAL 2260
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 29/154 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL-LVTSGDIDREEVAQYSLVITATDV 86
V ++++ GN++ F + ++ SG L LV S +DRE Y L ITA D+
Sbjct: 877 VVFALSSGNEDGCFCI------------DTFSGELRLVCS--LDRESKEFYILNITAYDL 922
Query: 87 KGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
++ + V++LD NDN P+F Q Y V + N+ V S + + A
Sbjct: 923 GMPQRSVWKLMAVNILDVNDNPPMFDQPRYVIRVPE-----NTAVG-----SVVFTAQAA 972
Query: 146 DADGD---KVAYKLAVPSNLVVIVPQTGELLLTG 176
D D D KV Y L ++L + TGE+++TG
Sbjct: 973 DMDTDMSGKVQYLLLTSTDLFRVDELTGEVIVTG 1006
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 16/103 (15%)
Query: 13 LPILV-ASSHKHP-HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDID 70
LP+ V A+ P + L+RYSI G+ F S + +SG + V + +D
Sbjct: 3560 LPVHVTATDQDGPINNLLRYSIVSGDPLQQF------------SIDHRSGEITVRTA-LD 3606
Query: 71 REEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQ 112
RE+ YSL + A D + +T+ V D NDN PVFSQ
Sbjct: 3607 REQTPHYSLTVQAADEGSPPLSSAALITITVSDVNDNPPVFSQ 3649
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 28 VRYSITQGNDNHTF---ALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
++Y++ G+D+ F AL +R T S LL +RE Y+L + AT
Sbjct: 206 IKYAVVVGDDDGLFQAEALSVGDFCFLRLKTRSSYSALL------NREVRDTYTLTVEAT 259
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD---LKSSLNSNVSHWKKFSSIGS 141
+ KA+T V V VLD ND P+F Y + + LK SS+
Sbjct: 260 ESIFDLKAKTKVLVQVLDTNDLKPLFYPASYNVAIREDTPLK-------------SSVVR 306
Query: 142 VSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
VSATDAD A Y ++ + P TG + L + +ELTV A D
Sbjct: 307 VSATDADEGSNAEFYYLFTSRAHPFAVDPFTGTVSLVKKLNYTQTQKFELTVLAED 362
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 11/94 (11%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
K+GVL VT+ +D E ++L + ATD + +E + V+V D NDN+PVFS Y
Sbjct: 2345 KTGVLTVTN-PLDYESQTAHTLTVRATDAVTGSFSEATIEVEVEDVNDNAPVFSPLTY-- 2401
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK 151
++ L N +S+ VSA+D D +
Sbjct: 2402 -AANIAERLPVN-------TSVTRVSASDKDSGR 2427
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVG 120
+ T ++D E + + ATD G K + V V+V+ DENDN P FS++VYR
Sbjct: 2985 ITTLREVDCERSRMFRFNVVATDHGGEVKLSSSVRVEVMVTDENDNPPTFSEEVYR---- 3040
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
S V + F I S++ DAD
Sbjct: 3041 ------GSVVENITPFEPIVSMTTFDAD 3062
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 31/156 (19%)
Query: 26 QLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
Q + + IT G+++ F + + SG + + + +D A Y+L + TD
Sbjct: 1504 QRLWFDITGGDEDKDFDI------------QKNSGTITI-ARKLDAARHAIYNLTVQVTD 1550
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G A T + VLD N++ PVF + +Y S+ + S WK I +SA
Sbjct: 1551 --GHRSATTQAYIRVLDINEHRPVFLKPLYEV-------SIPEDTSPWKD---ILQISAQ 1598
Query: 146 DADGD-KVAYKL--AVP---SNLVVIVPQTGELLLT 175
D D + K+ + + AVP + L + P++G L++T
Sbjct: 1599 DLDSNSKLVFSIHSAVPPDSTGLFHLDPKSGVLVMT 1634
>gi|383864925|ref|XP_003707928.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
suppressor-like [Megachile rotundata]
Length = 5000
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 97/215 (45%), Gaps = 44/215 (20%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQL--VRYSITQGNDNHTFALKNPTTHEIRNSTESKS 59
EN++ GT V I + SS + Q V YS T N FA+ +S S
Sbjct: 2823 ENAEIGTFV----IRITSSDRDIGQNANVTYSFTD-NPGKKFAM------------DSLS 2865
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
G + V G +DREE +Y L + D G +A T +T+ + D+NDN P F Q YRF
Sbjct: 2866 GNVTV-DGHLDREEQDEYLLKLVVAD--GAWQAATVLTITIQDQNDNPPEFEQDSYRFHF 2922
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELLL- 174
+L+ V+H +G V+A D D ++Y L PS+L + P TG++
Sbjct: 2923 PELQPP----VAH------VGQVAAIDRDKQGPNSVISYSLLQPSDLFTVDPATGDVFSK 2972
Query: 175 -------TGDPPSDDVEYELTVEAHDLQSPSRYAR 202
T P S + Y LTV A D P +R
Sbjct: 2973 KSLRYKHTHRPNSPENLYSLTVVATDNGKPPLSSR 3007
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 114/283 (40%), Gaps = 45/283 (15%)
Query: 32 ITQGNDNHTFALKNPTTH-EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN 90
+ G + F + PT E + +G L + +DRE +Y L + A D G+
Sbjct: 1789 LPNGGAGNNFDSQEPTNETECQFKLHPTTGQLTLAEA-LDRESREKYVLKVRADD--GLQ 1845
Query: 91 KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD 150
+ +T+ V D NDN+P+F Y F V + + + S IG V ATDAD D
Sbjct: 1846 HTDIALTIQVTDTNDNAPMFQSSAYSFDVPE----------NVPRGSRIGQVVATDADAD 1895
Query: 151 ----KVAYKLAV--PSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYARE 203
+++Y L +++ + P TG LT + V+ Y L V+A D P+ +
Sbjct: 1896 GPNSQLSYALISDWANDVFSLNPSTGVFTLTATLDYEQVQHYILVVQATDGGIPALSSTV 1955
Query: 204 PAQ---VWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEME 260
V L N+P+ + PH + T P + + D
Sbjct: 1956 TVYCNVVDLNDNAPIFE------------VGPHAADIVENTTIGTPVLSVTAQDLDSGDN 2003
Query: 261 GRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEE 303
GR+++A+ DEN V NG + +K D E+
Sbjct: 2004 GRVIYAVAGG---------DENGDFGVAANGTLFTRKLLDREQ 2037
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 59/117 (50%), Gaps = 21/117 (17%)
Query: 42 ALKNPTTHEIRNSTE--------SKSGVLLVTSGDIDREEVAQYSLVITATDVKGI--NK 91
L TT EIR E S+S ++ +G +DREE+ +Y+L + ATD KG
Sbjct: 363 GLNGETTVEIRAGNELGHFRLDNSQSFDIVYVNGRLDREEIPKYNLTVVATD-KGTPPRS 421
Query: 92 AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
A ++ + V D ND+ PVF Q Y ++ +L + S + S+SATDAD
Sbjct: 422 ATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPT----------GSFVASISATDAD 468
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 81/184 (44%), Gaps = 38/184 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV- 86
VRYSI+ G+DN F + S+ G ++ + +++ E ++Y L I D
Sbjct: 2215 VRYSISMGDDNRDFTI-------------SEDGGVIRVAKNLNFERKSKYHLTIRGEDCA 2261
Query: 87 -------KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSI 139
+G N VT+ VLD NDN+PVF Y L + + V F +
Sbjct: 2262 SEVGETPRGDN---AQVTITVLDINDNAPVFLDSPY------LAHVMENMVPPGGGF--V 2310
Query: 140 GSVSATDAD----GDKVAYKLA-VPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHD 193
V A DAD D+V Y L ++L I TG++ L + V EY LT+ A D
Sbjct: 2311 IQVKAYDADTPPYNDQVRYFLKEGDTDLFRINASTGDIFLLRPLDRESVPEYTLTLVAMD 2370
Query: 194 LQSP 197
SP
Sbjct: 2371 TGSP 2374
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-VKG 88
Y I GN + F L+ N T S + L T+G +DRE+V YSL + A D +
Sbjct: 136 YLIVDGNTDGKFRLQ-----VTGNPTGETSYLHLETTGKLDREQVEFYSLNVCARDRGRP 190
Query: 89 INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
V V VLD NDN P+F Q D +LN + +++ +V ATD D
Sbjct: 191 ARVGFLLVNVTVLDVNDNPPIFQQS-------DYVVALNESAPVG---TTVLTVHATDKD 240
Query: 149 GD---KVAYKLAVPSNLVVIVPQTGEL 172
+ ++ Y L I P+TG +
Sbjct: 241 SEDNSRLTYYLPDIERQFTIDPETGTI 267
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 93/219 (42%), Gaps = 31/219 (14%)
Query: 69 IDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+DRE L ++A D G N A TH+ V VLDEND +P FSQ V L+ +L
Sbjct: 505 LDREVQGSVELHVSARD-GGPNPKYASTHLKVTVLDENDEAPRFSQSV-------LEVTL 556
Query: 127 NSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGEL-LLTGDPPSD---- 181
+ N +++ +V VAY S++ P+T L LTG +
Sbjct: 557 SENTPPQSLVATLSAVDNDQGTNGSVAYSFH--SSVSRDYPKTFALDGLTGQLTTKIGLD 614
Query: 182 ---DVEYELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQLLQMIDRKSEAPHRI 235
EY + V A D SP + + + +Q NSPV + L I +AP
Sbjct: 615 RETIGEYRILVIAKDQGSPPQSSTATVVLTVQDVNDNSPVFYPWRYLMPI--PEDAPPGT 672
Query: 236 EKRRVTRA---VRPTKRIDFSETDGEMEGRIVFALEKET 271
RVT R ++ +S G G +FA+++ T
Sbjct: 673 SVGRVTATDADARENAQVRYSLESG---GEGLFAVDERT 708
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 17/111 (15%)
Query: 3 NSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL 62
N + TG + L + + + + V YS+ +GN+ FA+ T G +
Sbjct: 1209 NEGAATGTQLLKVYTTDADEGLNGDVFYSLEEGNERGHFAIDEAT------------GQI 1256
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN---KAETHVTVDVLDENDNSPVF 110
+T ++DRE Y L + A D G+ + T V V+VLDENDN P F
Sbjct: 1257 SLTK-ELDRETSDSYVLTVVAHDA-GLETRLSSSTTVRVEVLDENDNVPRF 1305
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 56/102 (54%), Gaps = 16/102 (15%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
LL SG +DRE + Y+L +TA D +G + T VTV VLDENDNSP+F + Y V
Sbjct: 2131 LLRVSGSLDRELRSNYTLEVTARD-RGEPPRSSSTTVTVTVLDENDNSPIFDPRQYSATV 2189
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV 158
+ N+++ +S+ VSA D D +V Y +++
Sbjct: 2190 AE-----NASIG-----ASVLQVSAMDRDEGANGRVRYSISM 2221
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQ 112
+ T+ +DREE+A Y L++ A D + T V V VLD+NDN P F++
Sbjct: 2765 ISTNAKLDREEIASYELIVEARDQGQPSLTGTATVLVSVLDKNDNPPQFTR 2815
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 120/315 (38%), Gaps = 62/315 (19%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+EN+ GT V L + + V Y++ G++N F + T
Sbjct: 1981 VENTTIGTPV--LSVTAQDLDSGDNGRVIYAVAGGDENGDFGVAANGT------------ 2026
Query: 61 VLLVTSGDIDREEVAQYSLVITATD-----VKGINKAETHVTVDVLDENDNSPVFSQKVY 115
L T +DRE+ Y+L++TATD + ++ + VTV +LD ND SP F
Sbjct: 2027 --LFTRKLLDREQKPLYNLLLTATDSPRPPARPLS-STVQVTVVLLDVNDMSPEF----- 2078
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLT 175
+ K S+ N + +I +V + V Y L + + P G L ++
Sbjct: 2079 ---ISPTKISIIENAASNTVVMAIKAVDRDEGRNGYVEYSLEDTTLPFTVGPVDGLLRVS 2135
Query: 176 GDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQMIDRK 228
G S D E Y L V A D P R + V + NSP+ Q +
Sbjct: 2136 G---SLDRELRSNYTLEVTARDRGEPPRSSSTTVTVTVLDENDNSPIFDPRQYSATV--- 2189
Query: 229 SEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVD 288
E + +V +D E GR+ R + D+N T+
Sbjct: 2190 ------AENASIGASVLQVSAMDRDEG---ANGRV---------RYSISMGDDNRDFTIS 2231
Query: 289 ENGDV-RVKKRWDFE 302
E+G V RV K +FE
Sbjct: 2232 EDGGVIRVAKNLNFE 2246
>gi|262263224|tpg|DAA06601.1| TPA_inf: protocadherin gamma a7 isoform [Anolis carolinensis]
Length = 936
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 74/145 (51%), Gaps = 29/145 (20%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE++ Y L++TATD + T + V VLD NDN+PVFSQ +Y + +
Sbjct: 193 LVLKELLDREELSVYDLILTATDGGDPVRSGTTQIKVRVLDANDNAPVFSQPIYEVTIKE 252
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSN----LVVIVPQTGELLL 174
+ K S++ VSATD D +V Y + + L ++ TGE++L
Sbjct: 253 ----------NIPKGSTVAFVSATDLDEGLNGEVKYTIRKITKSDFPLFLLNSTTGEIIL 302
Query: 175 TGDPPSDDVEYELT------VEAHD 193
TG ++YE++ VEA D
Sbjct: 303 TG-----RLDYEVSSLHEFEVEAKD 322
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIV- 119
LVT+ +DRE + +++ ITATD GI T + + VLD NDN PVF + Y + +
Sbjct: 403 LVTNSALDRECLPTFNITITATD-HGIPSLSTTTVIALHVLDTNDNPPVFEKSEYTYYLI 461
Query: 120 -----GDLKSSLNSNVSHWKKFSSI 139
G L SL +N W++ + I
Sbjct: 462 ENNNRGSLIFSLRANDPDWEENARI 486
>gi|351702219|gb|EHB05138.1| Protocadherin beta-15 [Heterocephalus glaber]
Length = 685
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 23/124 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ K + ++TV V D NDN+P F+Q Y V +
Sbjct: 400 LVTEGALDRESRAEYNITITVTDLGTPRLKTQHNITVQVSDVNDNAPTFTQTSYTLWVPE 459
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP---------SNLVVIVPQT 169
NS H IG++SATD D +V Y L +P ++LV I T
Sbjct: 460 ----NNSPALH------IGTISATDRDSGTNAQVTYSLLLPPPRDPHPGLASLVSINADT 509
Query: 170 GELL 173
G+L
Sbjct: 510 GQLF 513
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 46 PTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK-AETHVTVDVL 101
P +H I N + + LV ++DREE ++Y L +TA D + T + V V+
Sbjct: 172 PNSHFHVSIYNRGDGRKYPELVLDKELDREEQSEYRLTLTALDGGSPPRTGTTKIHVLVM 231
Query: 102 DENDNSPVFSQKVY 115
D NDN+P F+Q +Y
Sbjct: 232 DVNDNAPEFAQTLY 245
>gi|307201344|gb|EFN81179.1| Cadherin-86C [Harpegnathos saltator]
Length = 718
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 79/155 (50%), Gaps = 30/155 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD-IDREEVAQYSLVITATDV 86
++Y+ G + FA+ + +G++ V +G +DRE VAQ+ L + A D
Sbjct: 484 IKYTGITGGGSDAFAM------------DPDTGLITVATGSSLDREMVAQFQLTVIARDE 531
Query: 87 KGI-NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G N + V++LD NDN+P+F + VY F +LNS++++ F+ + AT
Sbjct: 532 DGKGNTGTASLIVNLLDVNDNAPIFEKDVYEF-------TLNSDLTN---FTGAAFIKAT 581
Query: 146 DADG----DKVAYKLAVPS--NLVVIVPQTGELLL 174
DAD +++ Y+L + N + TGEL+L
Sbjct: 582 DADAEPPNNEIRYELIQGNYENKFYLSEITGELVL 616
>gi|301753531|ref|XP_002912649.1| PREDICTED: protocadherin beta-10-like [Ailuropoda melanoleuca]
Length = 799
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 96/198 (48%), Gaps = 32/198 (16%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ IT TD+ K + +++V V D NDN+P FSQ Y V
Sbjct: 402 ILMTEGGLDRESQAEYNITITVTDLGTPRLKTQHNLSVTVSDVNDNAPAFSQSSYTLRVR 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP--------SNLVVIVPQT 169
+ NS H IGSVSATD D +V Y L +P ++LV I
Sbjct: 462 E----NNSPALH------IGSVSATDRDAGANAQVTYSLLLPPHDPHLPLASLVSINADN 511
Query: 170 GELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ---- 220
G+L + ++ +E V A D SP+ ++ +V + N+P VL Q
Sbjct: 512 GQLFALRALDYEALQAFEFGVRAADRGSPALSSQALVRVLVVDDNDNAPFVLYPLQNGSA 571
Query: 221 -LLQMIDRKSEAPHRIEK 237
+++ R +EA + + K
Sbjct: 572 PCTELVPRAAEAGYLVTK 589
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 16/114 (14%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-E 93
G ++T L + +I +S E LV +DRE+ + +L +TA D ++
Sbjct: 166 GIQSYTINLNSFFHIKISDSDEGMIYPELVLDKALDREKQHELTLTLTALDGGSPPRSGT 225
Query: 94 THVTVDVLDENDNSPVFSQKVY---------------RFIVGDLKSSLNSNVSH 132
T + + +LD NDN+P FSQ +Y + GD+ S +N+++S+
Sbjct: 226 TTIRIVILDINDNAPQFSQTIYETQAPENSPVGSLIAKVSAGDVDSGVNADISY 279
>gi|148678171|gb|EDL10118.1| mCG133388, isoform CRA_a [Mus musculus]
Length = 929
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +DREEV Y++ +TATD +G ETH+ +D+ D NDNSPVF Q Y +
Sbjct: 401 LVTDAVLDREEVPSYNITVTATD-RGSPPLTTETHLALDIADTNDNSPVFLQASYWAYIP 459
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLA 157
+ + + +SI SV+A D D DK V Y LA
Sbjct: 460 E----------NNPRGASIASVTAHDPDSDKNAQVTYSLA 489
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 45 NPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDV 100
+P H E++N + LV +DREE A + LV+TA+D + + V V
Sbjct: 170 SPNAHFSLEVQNGADGNKYPELVLESSLDREEKAAHLLVLTASDAGDPVRTGTARIRVTV 229
Query: 101 LDENDNSPVFSQKVYRFIV 119
+D NDN+P F++ YR V
Sbjct: 230 VDANDNAPAFARSEYRVSV 248
>gi|350581205|ref|XP_003480988.1| PREDICTED: protocadherin beta-6-like [Sus scrofa]
Length = 911
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 62/122 (50%), Gaps = 21/122 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DREE A+Y++ I+ +D+ + H +TV V D ND +P FSQ Y V +
Sbjct: 402 LVTEGPLDREERAEYNITISVSDLGTPRRHTQHNLTVRVADVNDYAPAFSQPAYTLRVRE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H I +V ATDAD ++ Y L PS+ LV I P TG+
Sbjct: 462 ----KNSPALH------IDTVRATDADAGANAQLTYSLLPPSDPHLPLASLVAINPDTGQ 511
Query: 172 LL 173
L
Sbjct: 512 LF 513
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 57/117 (48%), Gaps = 15/117 (12%)
Query: 45 NPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLD 102
NP H + RN + + LV +DREE + L +TA D ++ T + + VLD
Sbjct: 175 NPHFHVLTRNRKDGRKSPELVLDKALDREEQPELRLTLTALDGGSPPRSGTAEIQILVLD 234
Query: 103 ENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
NDN+P F+Q+ Y V + SSL S V +VSA D D +V+Y L
Sbjct: 235 INDNAPEFAQEFYEAQVPE-NSSLGSLVI---------TVSARDLDAGSFGEVSYAL 281
>gi|301623207|ref|XP_002940911.1| PREDICTED: protocadherin Fat 1-like isoform 1 [Xenopus (Silurana)
tropicalis]
Length = 4590
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 128/292 (43%), Gaps = 44/292 (15%)
Query: 16 LVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVA 75
VA + V Y I GN ++F + NP SGV+ T +D E +
Sbjct: 1686 FVAMLSAYSQSSVVYEIRDGNTLNSFDI-NP-----------NSGVV-TTQKQLDFETLP 1732
Query: 76 QYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK 135
++L + AT++ G++ T +TV V DENDN PVF+Q YR ++ + + NS V
Sbjct: 1733 SFTLTVQATNMAGLSTNST-LTVHVRDENDNFPVFAQTNYRGLISE-SAPPNSVVLTDDN 1790
Query: 136 FSSIGSVSATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELT 188
+ + ATD+D + + Y++ PS I TG L LL+ D ++ + T
Sbjct: 1791 IPLV--IRATDSDQESNALLVYQIVEPSVHKYFAIDSSTGALRTLLSLDYEQTNI-FHFT 1847
Query: 189 VEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTK 248
V+ HD+ P +A A V + ++D AP + T + PT
Sbjct: 1848 VQVHDMGYPRLFAENAANV-------------TIYVVDINDCAPVFSKDVYETSLLLPTY 1894
Query: 249 R------IDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVR 294
+ ++ ++ D ++++++ + +KF I ITV ++R
Sbjct: 1895 KGVRVITVNATDDDSGAYSQLIYSIIEGNIGDKFLIDPLKGTITVQNTTNLR 1946
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 82/187 (43%), Gaps = 46/187 (24%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y I GN++ F + NP T G++ + + +D E +Y L + ATD
Sbjct: 3266 ITYKIISGNEHGKFTI-NPVT-----------GMIFIIAS-LDYETSPEYYLTVEATDGG 3312
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
++ V ++V D NDNSPVFSQ Y +VG+ S S+ V A D
Sbjct: 3313 TPPLSDVASVNINVTDVNDNSPVFSQNTYTTVVGEDSVS----------GQSVLMVVADD 3362
Query: 147 ADG---DKVAYKL--AVPSNLVVIVPQTGEL---------LLTGDPPSDDVEYELTVEAH 192
ADG + + Y + P N +I P GE+ L++G Y LT++A
Sbjct: 3363 ADGPLNNHIRYSITEGNPGNTFIIDPVRGEVKVNKLLDRELISG--------YTLTIQAE 3414
Query: 193 DLQSPSR 199
D P R
Sbjct: 3415 DNGQPPR 3421
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 13/91 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y I+ GN FA+ NP K+G++ TS +DRE+ +++ L +T TD
Sbjct: 1175 LTYKISTGNPQGFFAI-NP-----------KTGLITTTSRKLDREQQSEHILEVTITDNG 1222
Query: 88 GINK-AETHVTVDVLDENDNSPVFSQKVYRF 117
K A T V V VLDENDN P F QK Y+
Sbjct: 1223 HPAKSAVTRVIVKVLDENDNKPQFLQKFYKI 1253
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P + K P ++Y I G++ + F + + +R T+
Sbjct: 46 ENSAAKTYV-GHPTKMGIYLKDPSWDIKYKIISGDNENIFKAEEHNLGDFCFLRIRTKGG 104
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y L + A + +A T + V VLD ND P+FS Y
Sbjct: 105 NTAIL------NREVKDNYLLTVKAVEKNSNAEARTRIRVQVLDTNDLRPLFSPTSYSV- 157
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + SSI V+ATDAD + Y +++ I P +G ++LT
Sbjct: 158 ------SLPENTAIR---SSIAKVTATDADIGTNGEFYYSFKERTDMFAIHPTSGTIVLT 208
Query: 176 G 176
G
Sbjct: 209 G 209
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 18/120 (15%)
Query: 2 ENSKSGTGVKGLPILVASSHKHP-HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
E+S SG V ++VA P + +RYSIT+GN +TF + +P E++
Sbjct: 3347 EDSVSGQSVL---MVVADDADGPLNNHIRYSITEGNPGNTFII-DPVRGEVK-------- 3394
Query: 61 VLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+ +DRE ++ Y+L I A D + + T V +DV D NDN P+FS+ Y ++
Sbjct: 3395 ----VNKLLDRELISGYTLTIQAEDNGQPPRRNTTTVNIDVSDVNDNPPMFSKGNYSIVI 3450
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 118/281 (41%), Gaps = 42/281 (14%)
Query: 12 GLPILVASSHKHPHQL---VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G P++ S+H +RYSI G+ F T HE + + + T+ +
Sbjct: 1051 GTPVMTVSAHDEDTGRDGEIRYSIRDGSGVGVF-----TIHEEKGT--------IRTADN 1097
Query: 69 IDREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+DRE + Y L + ATD +G+ + + +++ D NDN+P + VY V
Sbjct: 1098 LDRETTSHYWLTVYATD-RGVVPLSSFIQIYIEIEDVNDNAPQTVEPVYYPEV------- 1149
Query: 127 NSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV--PSNLVVIVPQTGELLLTGDPPSD 181
+ + K S+ ++A D D DK+ YK++ P I P+TG L+ T D
Sbjct: 1150 ---MENSAKDVSVVQINAFDPDSISSDKLTYKISTGNPQGFFAINPKTG-LITTTSRKLD 1205
Query: 182 ---DVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKR 238
E+ L V D P++ A +V ++ Q LQ K P R +
Sbjct: 1206 REQQSEHILEVTITDNGHPAKSAV--TRVIVKVLDENDNKPQFLQKF-YKIRLPEREKPE 1262
Query: 239 RVTRAVR-PTKRIDFSETDGEMEGRIVFALEKETEREKFKI 278
R A R P R+ + D I +++E+ E KF I
Sbjct: 1263 RERNAKRDPIYRVVAVDKDDGANAEISYSIEEGDEHGKFFI 1303
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 76/169 (44%), Gaps = 21/169 (12%)
Query: 41 FALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVD 99
F + NP + R SGVL T DREE + LV+ +D K A V V
Sbjct: 2015 FHILNP---DPRFKISPTSGVLSTTGIPFDREEEDLFELVVEVSDEQKPPTVAHVLVQVT 2071
Query: 100 VLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKL 156
V D NDN+PVF Y +V +++ H I V+A D D K + Y L
Sbjct: 2072 VEDVNDNNPVFVNLPYYAMV-----QIDAPEGHL-----IRHVTAVDRDIGKNGEITYYL 2121
Query: 157 AVPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSPSRYARE 203
S I P +GE+ L DP S + EY +TV A D +PS Y+ E
Sbjct: 2122 KEHSQQFQIGP-SGEIKLKKQFDPDSSNKEYFITVVAKDSGNPS-YSSE 2168
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 16/88 (18%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GND+ FA+ + ++G L + S +DRE QY+L IT D+ GI
Sbjct: 755 YAISGGNDDSCFAV------------DMETGWLKILS-PLDRELKDQYNLNITVYDL-GI 800
Query: 90 NKAET--HVTVDVLDENDNSPVFSQKVY 115
+ + + V+VLD NDN P F Q+ Y
Sbjct: 801 PQKSSWRLLDVNVLDVNDNPPEFLQESY 828
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 38/185 (20%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDV--LDENDNSPVFSQK 113
++ SG L+ T+ +D E + +LV+ ATD GI ++V + D NDN P F Q+
Sbjct: 2337 DASSG-LIETAKPLDYEYFQECTLVVRATD-NGIPPLSNDISVHIGLTDLNDNPPAFIQQ 2394
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLV--VIVPQ 168
VY + +L S H+ + V ATDAD +K+ Y + ++ + +I +
Sbjct: 2395 VYEVKISEL-----SKPGHF-----VTCVKATDADSSDTEKLEYSILSGNDDMNFIINSK 2444
Query: 169 TGELLLTG------DP-------PSDDV-----EYELTVEAHDLQSPSRYAREPAQVWLQ 210
TG + ++ +P SD V + +TV++ +L SP ++ + +V L
Sbjct: 2445 TGVITVSYLRKMILNPFYSINVSVSDGVFRSSAQVHVTVKSANLHSP-KFGQNEYEVELS 2503
Query: 211 FNSPV 215
NSPV
Sbjct: 2504 ENSPV 2508
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 49 HEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSP 108
++ R + +G ++V +D E+ + Y+L + ATD G T V++ V+D ND+ P
Sbjct: 1399 YDSRFDVDKGTGTIIVAR-PLDAEQKSNYNLTVEATD--GTRSVSTQVSIKVIDTNDHRP 1455
Query: 109 VFSQKVYRFIV 119
FS Y ++
Sbjct: 1456 EFSTSKYEVLI 1466
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 83/188 (44%), Gaps = 30/188 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V + IT G+ FA++N HE + + +DRE Y L ITATD
Sbjct: 2955 VTFHITGGDPLGQFAIEN-MQHEWK----------VYVRKPLDREVKDNYLLNITATD-- 3001
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G + V V VLD NDN+PV + Y + + +L V I V+A+DA
Sbjct: 3002 GTFATKAVVEVKVLDANDNTPVCEKTSYAETISE--DALAGRV--------ILQVAASDA 3051
Query: 148 D---GDKVAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAR 202
D ++ Y L V + + P TGEL + + +E Y L V+A D R+ +
Sbjct: 3052 DIRSNAEIIYTLHGVGAEKFHLNPFTGELKTSLPLDREILEVYHLMVKATD--GGGRFCQ 3109
Query: 203 EPAQVWLQ 210
++ L+
Sbjct: 3110 AAVELTLE 3117
>gi|301753523|ref|XP_002912646.1| PREDICTED: protocadherin beta-15-like [Ailuropoda melanoleuca]
Length = 796
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 95/197 (48%), Gaps = 32/197 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G +DRE A Y++ IT TD+ K + +++V V D NDN+P FSQ Y V +
Sbjct: 403 LVTNGALDRESKALYNITITVTDLGTPRLKTQHNLSVTVSDVNDNAPAFSQSSYTLRVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP--------SNLVVIVPQTG 170
NS H IGSVSATD D +V Y L +P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDAGANAQVTYSLLLPPHDPHLPLASLVSINADNG 512
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ----- 220
+L + ++ +E V A D SP+ ++ +V + N+P VL Q
Sbjct: 513 QLFALRALDYEALQAFEFGVRAADRGSPALSSQALVRVLVVDDNDNAPFVLYPLQNGSAP 572
Query: 221 LLQMIDRKSEAPHRIEK 237
+++ R +EA + + K
Sbjct: 573 CTELVPRAAEAGYLVTK 589
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIV 119
LV ++DRE+ A+ L +TA D ++ T V + VLD NDN+P F++ +Y+ V
Sbjct: 194 LVLDKELDREKQAELRLTLTALDGGSPPRSGTAQVRILVLDVNDNAPEFAKTLYQVQV 251
>gi|61316292|ref|NP_001013027.1| protocadherin beta-6 precursor [Pan troglodytes]
gi|62510880|sp|Q5DRC8.1|PCDB6_PANTR RecName: Full=Protocadherin beta-6; Short=PCDH-beta-6; Flags:
Precursor
Length = 794
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ K + +TV V D NDN+P F+Q Y V +
Sbjct: 401 LVTEGALDRESRAEYNITITVTDLGTPRLKTQQSITVQVSDVNDNAPAFTQTSYTLFVRE 460
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 461 ----NNSPALH------IGSVSATDRDSGINAQVTYSLLPPQDPHLPLASLVSINADNGH 510
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 511 LFALRSLDYEALQAFEFRVGATDRGSPA 538
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 82/176 (46%), Gaps = 29/176 (16%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
L RY+I+ NP H + RN +E + LV +DREE Q L + A D
Sbjct: 166 LQRYTIS----------SNPHFHVLTRNRSEGRKFPELVLDKPLDREEQPQLRLTLIALD 215
Query: 86 VKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
++ T + + VLD NDN P F++++Y V + N+ + S + +VSA
Sbjct: 216 GGSPPRSGTSEIQIQVLDINDNVPEFAEELYEAQVPE-----NNPLG-----SLVITVSA 265
Query: 145 TDADG---DKVAYKLAVPSNL---VVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
D D KV+Y L ++ I TGE+ L ++++ Y+L VEA D
Sbjct: 266 RDLDAGSFGKVSYALFQVDDVNQPFEINAITGEIRLRKALDFEEIQSYDLDVEATD 321
>gi|410932473|ref|XP_003979618.1| PREDICTED: protocadherin gamma-A10-like, partial [Takifugu
rubripes]
Length = 713
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 81/149 (54%), Gaps = 20/149 (13%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVT-VDVLDENDNSPVFSQ 112
+T SK G LL+ ++DREE L +TA D ++ T V V VLD NDN+PVFSQ
Sbjct: 182 NTGSKYGELLLEK-ELDREEQKDMKLKLTALDGGSPQRSGTVVIHVTVLDANDNAPVFSQ 240
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPS----NLVVI 165
+Y + + SS+N+ V +VSATDAD +V Y+ + S N+ +
Sbjct: 241 ALYSATLPE-NSSMNTPVI---------TVSATDADEGINGEVTYEFSRISEKSRNMFSL 290
Query: 166 VPQTGELLLTGDPPSDDVE-YELTVEAHD 193
TGE+ +TG+ +D + YE+ VEA D
Sbjct: 291 NQHTGEITVTGNIDYEDGQKYEVFVEAKD 319
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 20/178 (11%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+ +G+ID E+ +Y + + A D G++ +ET V +D+ D NDN+PV +Y V L
Sbjct: 297 ITVTGNIDYEDGQKYEVFVEAKDGYGLS-SETKVIIDITDVNDNAPV----IY---VKSL 348
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDADGD-----KVAYKLAVPSNLVVIVPQTGELLLTGD 177
K + +VS S +G ++ D D + + + + VP LV + L+ TG
Sbjct: 349 KDPVAEDVSPG---SEVGIINVQDRDSENNRQVRCSIQQNVPFKLVPSIKNYYSLVTTGQ 405
Query: 178 PPSDDV-EYELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEA 231
+ V +Y +T+ A D SP + + + + N PV ++E + + A
Sbjct: 406 LDRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESYSAYVSENNRA 463
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT+G +DRE V+ Y++ I+ATD ++ ++T + + V D NDN PVF ++ Y V
Sbjct: 400 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKT-LHLSVADINDNPPVFEEESYSAYVS 458
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + + S++ SVSA D D
Sbjct: 459 E----------NNRAGSTLCSVSAGDPD 476
>gi|345781801|ref|XP_532835.3| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Canis lupus
familiaris]
Length = 4589
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 127/303 (41%), Gaps = 46/303 (15%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G+ V H V Y I GN F + NP + I +T +D
Sbjct: 1681 GVGSFVGMVTAHSQSSVVYEIKDGNVAEVFDI-NPHSGSI------------ITQKALDF 1727
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E + Y+L+I T++ G++ T V V + DENDN PVF Q Y ++ + +S+NS V
Sbjct: 1728 ETLPVYTLIIQGTNMAGLS-TNTTVLVHLQDENDNLPVFMQSEYVGLISE-SASINSVVL 1785
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVE 184
K + + ATDAD + + Y + PS I TG + +L+ D +
Sbjct: 1786 TDKNAPLV--IRATDADKESNALLVYHIVEPSIHKYFAIDSSTGAIHTVLSLD-YEETST 1842
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAV 244
+ TV+ HD+ +P +A A V +++ID P + +
Sbjct: 1843 FHFTVQVHDMGTPRLFAEYAANV-------------TIRVIDINDCPPVFSKSLYEASLL 1889
Query: 245 RPTKR------IDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKR 298
PT R ++ ++ D ++++++ + EKF + ITV +R R
Sbjct: 1890 LPTYRGVKVITVNATDADSSAFSQLMYSITEGNIGEKFFMDYRTGTITVQNTTQLR--SR 1947
Query: 299 WDF 301
++F
Sbjct: 1948 YEF 1950
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 32/199 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + YSI GN++ F++ +SK+G + +
Sbjct: 3247 GTEVLQVYAASRDIEANAEITYSIISGNEHGKFSI------------DSKTGAIFIIE-T 3293
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L + ATD ++ T V ++V D NDNSPVFSQ Y ++ + + L
Sbjct: 3294 LDYESSHEYYLTVEATDGGTPSLSDVAT-VNINVTDINDNSPVFSQDTYTAVISE-DALL 3351
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
S+ +V A D DG ++ Y + + I P GE+ +T +
Sbjct: 3352 E---------QSVITVMADDTDGPSNSRIRYSIIDGNQGSPFTIDPAKGEVKVTKLLDRE 3402
Query: 182 DVE-YELTVEAHDLQSPSR 199
+ Y LTV+A D SP R
Sbjct: 3403 TISGYTLTVQASDNGSPPR 3421
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + P +RY I G++ + F + + +R T+
Sbjct: 45 ENSAAKTYV-GHPVKMGIYLTDPSWELRYKIVSGDNENLFKAEEYVLGDFCFLRIRTKGG 103
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A V V VLD ND P+FS Y
Sbjct: 104 NTAIL------NREVKDHYTLIVKAVEKNTNAEARAKVRVQVLDTNDLRPLFSPTSYSV- 156
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 157 ------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGTVVLT 207
Query: 176 G 176
G
Sbjct: 208 G 208
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1174 LMYKITSGNPQGFFSI------------HPKTGLITTTSRKLDREQQDEHILEVTVTDNG 1221
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRF 117
K+ V V +LDENDN P F QK Y+
Sbjct: 1222 SPPKSTIARVIVKILDENDNKPQFLQKFYKI 1252
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYSI GN F + +P E++ + +DRE ++ Y+L + A+D
Sbjct: 3371 IRYSIIDGNQGSPFTI-DPAKGEVK------------VTKLLDRETISGYTLTVQASDNG 3417
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+PVFS+ Y I+
Sbjct: 3418 SPPRVNTTTVNIDVSDVNDNAPVFSKGNYSVII 3450
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 77/173 (44%), Gaps = 32/173 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N I+N + + +DRE+ Y L ITATD
Sbjct: 2954 VAYYITGGDPLGQFAIEN-----IQNEWK------VYVKKPLDREKRDNYLLTITATD-- 3000
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS--IGSVSAT 145
G ++ V V VLD NDNSP+ + +Y S+ F I VSAT
Sbjct: 3001 GTFSSKAIVEVKVLDANDNSPICEKTLY------------SDTIPEDAFPGKLIMQVSAT 3048
Query: 146 DAD---GDKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
DAD ++ Y L P + + P TGEL ++ E Y L V+A D
Sbjct: 3049 DADIRSNAEITYTLFGPGAEKFKLNPDTGELKTLAPLDREEQEVYNLLVKATD 3101
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+ R++ + + L +T +D +A T V V VL N N P F+Q Y K+S +
Sbjct: 426 VKRQQASHFELEVTTSD----RRASTRVLVKVLSANSNPPEFTQTAY-------KASFDE 474
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT 188
NV S+ +V + + V Y +A +++ ++ + T S++++YEL
Sbjct: 475 NVPIGTAVMSVSAVDPDEGENGYVTYSIANLNHVPFVIDHFTGAVST----SENLDYELM 530
Query: 189 VEAHDLQ 195
+ L+
Sbjct: 531 PRVYTLR 537
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 65/143 (45%), Gaps = 17/143 (11%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
L T +DREE Y+L++ ATD G E ++ + V D NDN+P FS Y V
Sbjct: 3079 LKTLAPLDREEQEVYNLLVKATDGGG-RFCEANIVLTVEDVNDNAPEFSADPYTITV--- 3134
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDADGD----KVAYKLAVPSNLVVIVPQTGELLLTGDP 178
+ + + + V ATDAD K++Y L ++ + + ++ P
Sbjct: 3135 -------FENTEPGTPLTRVQATDADAGXLNRKISYSLINSADGQFSINELSGIIQLEKP 3187
Query: 179 PSDDVE--YELTVEAHDLQSPSR 199
+++ Y LT++A D P R
Sbjct: 3188 LDRELQAVYTLTLKAVDQGLPRR 3210
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 54/103 (52%), Gaps = 11/103 (10%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQK 113
+S +G++ + +D E+ Q+ + + A D G+ ++ VTVDV D NDN P+F Q+
Sbjct: 2336 DSSTGLISLVRA-LDYEQFQQHKIFVRAVD-GGMPPLSSDVIVTVDVTDLNDNPPLFDQQ 2393
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKL 156
+Y ++ ++ + H + + + A +D DK+ Y +
Sbjct: 2394 IY-------EAKISEHAIHGHFVTCVKAYDADSSDIDKLDYSI 2429
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 14/87 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GN++ F + + ++G+L + S +DRE +Y+L IT +D+
Sbjct: 754 YAISGGNEDSCFII------------DMETGMLKILS-PLDRETTDKYTLNITVSDLGIP 800
Query: 90 NKAETH-VTVDVLDENDNSPVFSQKVY 115
KA + + VLD NDN P F Q+ Y
Sbjct: 801 QKAAWRLIDIRVLDANDNPPEFLQESY 827
>gi|431892558|gb|ELK02991.1| Protocadherin beta-10 [Pteropus alecto]
Length = 798
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 63/123 (51%), Gaps = 21/123 (17%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ IT TD+ K E +VTV V D NDN+P F+Q Y V
Sbjct: 402 MLMTEGALDRESKAEYNVTITVTDLGSPRLKTEHNVTVMVSDVNDNAPAFTQTSYTLFVR 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 462 E----NNSPALH------IGSVSATDRDAGANAQVTYSLLPPQDPQLPLASLVSINADNG 511
Query: 171 ELL 173
+L
Sbjct: 512 QLF 514
>gi|296193285|ref|XP_002806645.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Callithrix
jacchus]
Length = 4349
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 29/223 (13%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G PIL+ S+ V Y + +GN + F++ S SG L+ T ++D
Sbjct: 1676 GSPILLVSAMSSSE--VTYELREGNKDGVFSMN------------SYSG-LMSTQKNLDH 1720
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E+++ Y L I +++ G + V VD++DENDN+P+F + + VG + +
Sbjct: 1721 EKISSYQLKIRGSNMAGA-FTDVMVVVDIIDENDNAPMFLKSTF---VGQISEAAPLYSM 1776
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDD-VEY 185
K ++ + A+D+D + + YK+ P L I P G L + + + +
Sbjct: 1777 IMDKNNNPFVIHASDSDKEANSLLVYKILEPEALKFFKIDPSMGTLTIVSEMDYESRPSF 1836
Query: 186 ELTVEAHDLQSPSRYAREPAQVWLQF----NSPVLQDEQLLQM 224
+ V HD +P +A PAQV + +SP EQ+ ++
Sbjct: 1837 KFCVYVHDQGNPILFAPRPAQVIINVRDVNDSPPRFSEQIYEV 1879
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 90/201 (44%), Gaps = 35/201 (17%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS+ G V L L A + Q+ Y IT+G+ F + E R S+
Sbjct: 2916 IENSEPGELVATLKTLDADISEQNRQVTCY-ITEGDPLGQFGISQ-VEDEWRISSRKT-- 2971
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+DRE +A+Y L +TA+D G +A V + VLD NDNSP SQ +Y V
Sbjct: 2972 --------LDREHMAKYLLRVTASD--GKFQASVTVEIFVLDVNDNSPQCSQLLYTGKV- 3020
Query: 121 DLKSSLNSNVSHWKKFSS--IGSVSATDADGD---KVAYKLAVP-SNLVVIVPQTGEL-- 172
H F I VSATD D D ++ Y L P ++ + P TGEL
Sbjct: 3021 -----------HEDVFPGHFILKVSATDLDADTNAQITYSLHGPGAHEFKLDPHTGELTT 3069
Query: 173 LLTGDPPSDDVEYELTVEAHD 193
L D DV + L V+A D
Sbjct: 3070 LTPLDRERKDV-FNLVVKATD 3089
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLV 80
P VRY I G+ + F + +R T+S + LL +RE Y+L+
Sbjct: 65 PQWAVRYRIISGDVANVFKTEEYVVGNFCFLRIRTKSSNTALL------NREVRDSYTLI 118
Query: 81 ITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD---LKSSLNSNVSHWKKFS 137
I AT+ +A T V V +LD+ND P+FS YR + + LK S
Sbjct: 119 IQATEKTLELEALTRVVVHILDQNDLKPLFSPPSYRVTISEDTPLK-------------S 165
Query: 138 SIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTG 176
I V+ATDAD + A Y S + I P +G + + G
Sbjct: 166 PICKVTATDADLGQNAEFYYNFNTRSEMFAIHPTSGVVTVAG 207
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 28/169 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN+ F + E ++G LL + +D E Y L +T D+
Sbjct: 752 YVIADGNEEGCFDI------------ELETG-LLTIAAPLDYETTNFYILNVTVYDLGTP 798
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K+ +TV+V D NDN+P F Y+ + + ++ V ++I ++ DAD
Sbjct: 799 QKSSWKLLTVNVKDWNDNAPRFPPGGYQLTISE-----DTEVG-----TTIAELTTKDAD 848
Query: 149 GD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSD-DVEYELTVEAHD 193
+ +V Y L P+ + P TGEL++TG + + +Y L VEA D
Sbjct: 849 SEDNGRVRYTLLSPTEKFSLHPLTGELVVTGHLDRESEPQYILKVEARD 897
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
+T+ K+GVL VT G +D E ++ + ATD + +E V V V D NDN P FSQ
Sbjct: 2217 TTDFKTGVLTVT-GPLDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQL 2275
Query: 114 VY 115
VY
Sbjct: 2276 VY 2277
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 33/205 (16%)
Query: 26 QLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
++V +T + + LK P++ + +++G L+ T+ +D + A Y L I +
Sbjct: 380 RVVMVRVTPAFPDLQYVLK-PSSENLGFKLNARTG-LITTTKLMDFHDRAHYQLHIRTSP 437
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+A T V +D++D N+++PVF++ Y +L+ N+ +S+ + +AT
Sbjct: 438 ----GQASTVVVIDIVDCNNHAPVFNRSSY-------DGTLDENI---PPGTSVLAATAT 483
Query: 146 DAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT-------VEAHDLQ 195
D D V Y +A P L + ++ T P ++YEL V A D
Sbjct: 484 DQDHRENGYVTYSIAGPKALPFSIDPYLGIISTSKP----MDYELMKRIYTFRVRASDWG 539
Query: 196 SPSRYAREPAQVWLQFNSPVLQDEQ 220
SP R +E V+LQ + L D Q
Sbjct: 540 SPFRREKE-VSVFLQLRN--LNDNQ 561
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 31/123 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-V 86
+ ++IT GN + F + +P T LL T+ +DRE ++ L +T D
Sbjct: 1172 LTFNITSGN-HMGFFIIHPVTG------------LLSTARQLDRENKDEHILEVTVLDNG 1218
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQK-----------------VYRFIVGDLKSSLNSN 129
+ K+ + V V +LD NDN P FS K VYR + DL LN
Sbjct: 1219 EPPLKSTSRVVVGILDINDNPPAFSHKLFNVRLPERLSPVSPGPVYRLVASDLDEGLNGR 1278
Query: 130 VSH 132
V++
Sbjct: 1279 VTY 1281
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH 95
N T++L P HE + + L T +DRE ++LV+ ATD G +
Sbjct: 3043 NAQITYSLHGPGAHEFKLDPHTGE---LTTLTPLDRERKDVFNLVVKATDGGG-RSCQAD 3098
Query: 96 VTVDVLDENDNSPVF 110
VT+ V D NDN+P F
Sbjct: 3099 VTLHVEDVNDNAPRF 3113
>gi|9256618|ref|NP_061762.1| protocadherin beta-6 precursor [Homo sapiens]
gi|13431374|sp|Q9Y5E3.1|PCDB6_HUMAN RecName: Full=Protocadherin beta-6; Short=PCDH-beta-6; Flags:
Precursor
gi|5457047|gb|AAD43760.1|AF152499_1 protocadherin beta 6 [Homo sapiens]
gi|14009467|gb|AAK51619.1|AF217752_1 protocadherin-beta6 [Homo sapiens]
gi|151554995|gb|AAI48407.1| Protocadherin beta 6 [synthetic construct]
gi|157170302|gb|AAI52976.1| Protocadherin beta 6 [synthetic construct]
gi|261857680|dbj|BAI45362.1| protocadherin beta 6 [synthetic construct]
Length = 794
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 85/185 (45%), Gaps = 28/185 (15%)
Query: 30 YSITQGNDNHT----FALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
+S++ + H +++N +R S E+ LVT G +DRE A+Y++ IT TD
Sbjct: 366 FSVSDADSGHNQQVICSIENNLPFLLRPSVENF--YTLVTEGALDRESRAEYNITITVTD 423
Query: 86 VKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+ K + +TV V D NDN P F+Q Y V + NS H IGSVSA
Sbjct: 424 LGTPRLKTQQSITVQVSDVNDNVPAFTQTSYTLFVRE----NNSPALH------IGSVSA 473
Query: 145 TDADGD---KVAYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
TD D +V Y L P S+LV I G L + ++ +E V A D
Sbjct: 474 TDRDSGINAQVTYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQSFEFRVGATD 533
Query: 194 LQSPS 198
SP+
Sbjct: 534 RGSPA 538
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 12/91 (13%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
L RY+I+ NP H + RN +E + LV +DREE Q L + A D
Sbjct: 166 LQRYTIS----------SNPHFHVLTRNRSEGRKFPELVLDKPLDREEQPQLRLTLIALD 215
Query: 86 VKGINKAET-HVTVDVLDENDNSPVFSQKVY 115
++ T + + VLD NDN P F+Q++Y
Sbjct: 216 GGSPPRSGTSEIQIQVLDINDNVPEFAQELY 246
>gi|301623209|ref|XP_002940912.1| PREDICTED: protocadherin Fat 1-like isoform 2 [Xenopus (Silurana)
tropicalis]
Length = 4570
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 128/292 (43%), Gaps = 44/292 (15%)
Query: 16 LVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVA 75
VA + V Y I GN ++F + NP SGV+ T +D E +
Sbjct: 1654 FVAMLSAYSQSSVVYEIRDGNTLNSFDI-NP-----------NSGVV-TTQKQLDFETLP 1700
Query: 76 QYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK 135
++L + AT++ G++ T +TV V DENDN PVF+Q YR ++ + + NS V
Sbjct: 1701 SFTLTVQATNMAGLSTNST-LTVHVRDENDNFPVFAQTNYRGLISE-SAPPNSVVLTDDN 1758
Query: 136 FSSIGSVSATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELT 188
+ + ATD+D + + Y++ PS I TG L LL+ D ++ + T
Sbjct: 1759 IPLV--IRATDSDQESNALLVYQIVEPSVHKYFAIDSSTGALRTLLSLDYEQTNI-FHFT 1815
Query: 189 VEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTK 248
V+ HD+ P +A A V + ++D AP + T + PT
Sbjct: 1816 VQVHDMGYPRLFAENAANV-------------TIYVVDINDCAPVFSKDVYETSLLLPTY 1862
Query: 249 R------IDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVR 294
+ ++ ++ D ++++++ + +KF I ITV ++R
Sbjct: 1863 KGVRVITVNATDDDSGAYSQLIYSIIEGNIGDKFLIDPLKGTITVQNTTNLR 1914
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 82/187 (43%), Gaps = 46/187 (24%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y I GN++ F + NP T G++ + + +D E +Y L + ATD
Sbjct: 3234 ITYKIISGNEHGKFTI-NPVT-----------GMIFIIAS-LDYETSPEYYLTVEATDGG 3280
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
++ V ++V D NDNSPVFSQ Y +VG+ S S+ V A D
Sbjct: 3281 TPPLSDVASVNINVTDVNDNSPVFSQNTYTTVVGEDSVS----------GQSVLMVVADD 3330
Query: 147 ADG---DKVAYKL--AVPSNLVVIVPQTGEL---------LLTGDPPSDDVEYELTVEAH 192
ADG + + Y + P N +I P GE+ L++G Y LT++A
Sbjct: 3331 ADGPLNNHIRYSITEGNPGNTFIIDPVRGEVKVNKLLDRELISG--------YTLTIQAE 3382
Query: 193 DLQSPSR 199
D P R
Sbjct: 3383 DNGQPPR 3389
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 13/91 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y I+ GN FA+ NP K+G++ TS +DRE+ +++ L +T TD
Sbjct: 1143 LTYKISTGNPQGFFAI-NP-----------KTGLITTTSRKLDREQQSEHILEVTITDNG 1190
Query: 88 GINK-AETHVTVDVLDENDNSPVFSQKVYRF 117
K A T V V VLDENDN P F QK Y+
Sbjct: 1191 HPAKSAVTRVIVKVLDENDNKPQFLQKFYKI 1221
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P + K P ++Y I G++ + F + + +R T+
Sbjct: 14 ENSAAKTYV-GHPTKMGIYLKDPSWDIKYKIISGDNENIFKAEEHNLGDFCFLRIRTKGG 72
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y L + A + +A T + V VLD ND P+FS Y
Sbjct: 73 NTAIL------NREVKDNYLLTVKAVEKNSNAEARTRIRVQVLDTNDLRPLFSPTSYSV- 125
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + SSI V+ATDAD + Y +++ I P +G ++LT
Sbjct: 126 ------SLPENTAIR---SSIAKVTATDADIGTNGEFYYSFKERTDMFAIHPTSGTIVLT 176
Query: 176 G 176
G
Sbjct: 177 G 177
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 18/120 (15%)
Query: 2 ENSKSGTGVKGLPILVASSHKHP-HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
E+S SG V ++VA P + +RYSIT+GN +TF + +P E++
Sbjct: 3315 EDSVSGQSVL---MVVADDADGPLNNHIRYSITEGNPGNTFII-DPVRGEVK-------- 3362
Query: 61 VLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+ +DRE ++ Y+L I A D + + T V +DV D NDN P+FS+ Y ++
Sbjct: 3363 ----VNKLLDRELISGYTLTIQAEDNGQPPRRNTTTVNIDVSDVNDNPPMFSKGNYSIVI 3418
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 118/281 (41%), Gaps = 42/281 (14%)
Query: 12 GLPILVASSHKHPHQL---VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G P++ S+H +RYSI G+ F T HE + + + T+ +
Sbjct: 1019 GTPVMTVSAHDEDTGRDGEIRYSIRDGSGVGVF-----TIHEEKGT--------IRTADN 1065
Query: 69 IDREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+DRE + Y L + ATD +G+ + + +++ D NDN+P + VY V
Sbjct: 1066 LDRETTSHYWLTVYATD-RGVVPLSSFIQIYIEIEDVNDNAPQTVEPVYYPEV------- 1117
Query: 127 NSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV--PSNLVVIVPQTGELLLTGDPPSD 181
+ + K S+ ++A D D DK+ YK++ P I P+TG L+ T D
Sbjct: 1118 ---MENSAKDVSVVQINAFDPDSISSDKLTYKISTGNPQGFFAINPKTG-LITTTSRKLD 1173
Query: 182 ---DVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKR 238
E+ L V D P++ A +V ++ Q LQ K P R +
Sbjct: 1174 REQQSEHILEVTITDNGHPAKSAV--TRVIVKVLDENDNKPQFLQKF-YKIRLPEREKPE 1230
Query: 239 RVTRAVR-PTKRIDFSETDGEMEGRIVFALEKETEREKFKI 278
R A R P R+ + D I +++E+ E KF I
Sbjct: 1231 RERNAKRDPIYRVVAVDKDDGANAEISYSIEEGDEHGKFFI 1271
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 76/169 (44%), Gaps = 21/169 (12%)
Query: 41 FALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVD 99
F + NP + R SGVL T DREE + LV+ +D K A V V
Sbjct: 1983 FHILNP---DPRFKISPTSGVLSTTGIPFDREEEDLFELVVEVSDEQKPPTVAHVLVQVT 2039
Query: 100 VLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKL 156
V D NDN+PVF Y +V +++ H I V+A D D K + Y L
Sbjct: 2040 VEDVNDNNPVFVNLPYYAMV-----QIDAPEGHL-----IRHVTAVDRDIGKNGEITYYL 2089
Query: 157 AVPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSPSRYARE 203
S I P +GE+ L DP S + EY +TV A D +PS Y+ E
Sbjct: 2090 KEHSQQFQIGP-SGEIKLKKQFDPDSSNKEYFITVVAKDSGNPS-YSSE 2136
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 16/88 (18%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GND+ FA+ + ++G L + S +DRE QY+L IT D+ GI
Sbjct: 723 YAISGGNDDSCFAV------------DMETGWLKILS-PLDRELKDQYNLNITVYDL-GI 768
Query: 90 NKAET--HVTVDVLDENDNSPVFSQKVY 115
+ + + V+VLD NDN P F Q+ Y
Sbjct: 769 PQKSSWRLLDVNVLDVNDNPPEFLQESY 796
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 38/185 (20%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDV--LDENDNSPVFSQK 113
++ SG L+ T+ +D E + +LV+ ATD GI ++V + D NDN P F Q+
Sbjct: 2305 DASSG-LIETAKPLDYEYFQECTLVVRATD-NGIPPLSNDISVHIGLTDLNDNPPAFIQQ 2362
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLV--VIVPQ 168
VY + +L S H+ + V ATDAD +K+ Y + ++ + +I +
Sbjct: 2363 VYEVKISEL-----SKPGHF-----VTCVKATDADSSDTEKLEYSILSGNDDMNFIINSK 2412
Query: 169 TGELLLTG------DP-------PSDDV-----EYELTVEAHDLQSPSRYAREPAQVWLQ 210
TG + ++ +P SD V + +TV++ +L SP ++ + +V L
Sbjct: 2413 TGVITVSYLRKMILNPFYSINVSVSDGVFRSSAQVHVTVKSANLHSP-KFGQNEYEVELS 2471
Query: 211 FNSPV 215
NSPV
Sbjct: 2472 ENSPV 2476
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 83/188 (44%), Gaps = 30/188 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V + IT G+ FA++N HE + + +DRE Y L ITATD
Sbjct: 2923 VTFHITGGDPLGQFAIEN-MQHEWK----------VYVRKPLDREVKDNYLLNITATD-- 2969
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G + V V VLD NDN+PV + Y + + +L V I V+A+DA
Sbjct: 2970 GTFATKAVVEVKVLDANDNTPVCEKTSYAETISE--DALAGRV--------ILQVAASDA 3019
Query: 148 D---GDKVAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAR 202
D ++ Y L V + + P TGEL + + +E Y L V+A D R+ +
Sbjct: 3020 DIRSNAEIIYTLHGVGAEKFHLNPFTGELKTSLPLDREILEVYHLMVKATD--GGGRFCQ 3077
Query: 203 EPAQVWLQ 210
++ L+
Sbjct: 3078 AAVELTLE 3085
Score = 37.4 bits (85), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 49 HEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSP 108
++ R + +G ++V + +D E+ + Y+L + ATD G T V++ V+D ND+ P
Sbjct: 1367 YDSRFDVDKGTGTIIV-ARPLDAEQKSNYNLTVEATD--GTRSVSTQVSIKVIDTNDHRP 1423
Query: 109 VFSQKVYRFIV 119
FS Y ++
Sbjct: 1424 EFSTSKYEVLI 1434
>gi|262263248|tpg|DAA06625.1| TPA_inf: protocadherin gamma b23 isoform [Anolis carolinensis]
Length = 940
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 93/198 (46%), Gaps = 34/198 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIVG 120
L+T G +DRE+ ++Y++ ITATD KG TH +TV + D NDNSP F + Y V
Sbjct: 406 LLTDGPLDREKNSEYNITITATD-KGTPSLSTHKSITVHISDINDNSPTFEESTYHVFVS 464
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA------VP-SNLVVIVPQTG 170
+ S +SI ++ A+D D D ++ Y + +P S+ V I +TG
Sbjct: 465 ENNPS----------GASIYTIKASDPDLDRNARITYSILNSNIDELPLSSFVSINSETG 514
Query: 171 ELLLTGDPPSDDV-EYELTVEAHDLQSPSRYAREPAQVWL---QFNSPVL-------QDE 219
+ + E+ + V+A D SPS + QV++ NSP +
Sbjct: 515 TIYAQRSFDYEQFREFHIQVKAQDGGSPSLSSSVTVQVFILDQNDNSPRILYPLLDTDGS 574
Query: 220 QLLQMIDRKSEAPHRIEK 237
L +M+ R SE + + K
Sbjct: 575 ALFEMVPRSSELGYLVTK 592
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 19/106 (17%)
Query: 48 THEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDN 106
T +++ S + +L+ +DRE L++TA D K T + +++ D NDN
Sbjct: 181 TLDVKESPDGNKYPVLIQRKSLDRESEHSLHLILTALDGGEPFKTGTAQIWINITDANDN 240
Query: 107 SPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS----VSATDAD 148
P+F+Q+ YR S K+ + IGS V+ATDAD
Sbjct: 241 PPIFTQETYR--------------SSLKETTPIGSLVTQVTATDAD 272
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 114/269 (42%), Gaps = 48/269 (17%)
Query: 51 IRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVF 110
++ S + +SG++ + +D EE Y +++ A D G+ A V VDVLDENDN P
Sbjct: 292 LKFSLDPESGIISIRE-PLDFEESTSYMMLVEAKDGGGL-LAHCKVEVDVLDENDNDPEI 349
Query: 111 S-QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL---VVI 165
S V+ I D SL V I +S D D G+ ++ +NL ++
Sbjct: 350 SLTSVFSPIPED---SLPGTV--------IALISVADRDEGESGKTACSIQNNLPFKILS 398
Query: 166 VPQTGELLLTGDPPSD---DVEYELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDE 219
T LLT D P D + EY +T+ A D +PS + V + NSP ++
Sbjct: 399 SSSTYYKLLT-DGPLDREKNSEYNITITATDKGTPSLSTHKSITVHISDINDNSPTFEES 457
Query: 220 QLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIR 279
+ + + I I S+ D + RI +++
Sbjct: 458 TYHVFVSENNPSGASI------------YTIKASDPDLDRNARITYSILNSN-------I 498
Query: 280 DENP---WITVD-ENGDVRVKKRWDFEEL 304
DE P +++++ E G + ++ +D+E+
Sbjct: 499 DELPLSSFVSINSETGTIYAQRSFDYEQF 527
>gi|44890561|gb|AAH66851.1| Pcdhga12 protein [Mus musculus]
Length = 812
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +DREEV Y++ +TATD +G ETH+ +D+ D NDNSPVF Q Y +
Sbjct: 404 LVTDAVLDREEVPSYNITVTATD-RGSPPLTTETHLALDIADTNDNSPVFLQASYWAYIP 462
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLA 157
+ + + +SI SV+A D D DK V Y LA
Sbjct: 463 E----------NNPRGASIASVTAHDPDSDKNAQVTYSLA 492
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 45 NPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDV 100
+P H E++N + LV +DREE A + LV+TA+D + + V V
Sbjct: 173 SPNAHFSLEVQNGADGNKYPELVLESSLDREEKAAHLLVLTASDAGDPVRTGTARIRVTV 232
Query: 101 LDENDNSPVFSQKVYRFIV 119
LD NDN+P F++ YR V
Sbjct: 233 LDANDNAPAFARSEYRVSV 251
>gi|402872805|ref|XP_003900292.1| PREDICTED: protocadherin beta-6 [Papio anubis]
Length = 658
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 86/185 (46%), Gaps = 28/185 (15%)
Query: 30 YSITQGNDNHT----FALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
+S++ + H +++N +R S E+ LVT G +DRE A+Y++ IT TD
Sbjct: 230 FSVSDADSGHNQQVICSIENNLPFLLRPSVENF--YTLVTDGALDRESRAEYNITITVTD 287
Query: 86 VKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+ K + +TV V D NDN+P F+Q Y V + NS H IGSVSA
Sbjct: 288 LGTPRLKTQQSITVLVSDVNDNAPAFTQTSYTLFVRE----NNSPALH------IGSVSA 337
Query: 145 TDADGD---KVAYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHD 193
TD D +V Y L P ++LV I G L + + E+E V A D
Sbjct: 338 TDRDSGTNAQVTYSLLPPQDPHLPLASLVSISADNGHLFALRSLDYEALQEFEFRVGATD 397
Query: 194 LQSPS 198
SP+
Sbjct: 398 RGSPA 402
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 33 TQGNDNHTFALKNPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK 91
+ G ++T + NP H + RN +E + LV +DREE + +L +TA D +
Sbjct: 27 SNGLQSYTIS-SNPHFHVLTRNRSEGRKFPELVLDKPLDREEQPRLTLTLTALDGGSPPR 85
Query: 92 AET-HVTVDVLDENDNSPVFSQKVY 115
+ T + + VLD NDN P F+Q++Y
Sbjct: 86 SGTSEIHIQVLDINDNIPEFAQELY 110
>gi|18087775|ref|NP_291073.1| protocadherin gamma subfamily A, 12 [Mus musculus]
gi|13876328|gb|AAK26084.1| protocadherin gamma A12 [Mus musculus]
gi|32451627|gb|AAH54528.1| Protocadherin gamma subfamily A, 12 [Mus musculus]
gi|34785238|gb|AAH56998.1| Protocadherin gamma subfamily A, 12 [Mus musculus]
Length = 932
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +DREEV Y++ +TATD +G ETH+ +D+ D NDNSPVF Q Y +
Sbjct: 404 LVTDAVLDREEVPSYNITMTATD-RGSPPLTTETHLALDIADTNDNSPVFLQASYWAYIP 462
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLA 157
+ + + +SI SV+A D D DK V Y LA
Sbjct: 463 E----------NNPRGASIASVTAHDPDSDKNAQVTYSLA 492
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 45 NPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDV 100
+P H E++N + LV +DREE A + LV+TA+D + + V V
Sbjct: 173 SPNAHFSLEVQNGADGNKYPELVLESSLDREEKAAHLLVLTASDAGDPVRTGTARIRVMV 232
Query: 101 LDENDNSPVFSQKVYRFIV 119
+D NDN+P F++ YR V
Sbjct: 233 VDANDNAPAFARSEYRVSV 251
>gi|57043475|ref|XP_544306.1| PREDICTED: protocadherin beta-15 [Canis lupus familiaris]
Length = 795
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 114/256 (44%), Gaps = 51/256 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G +DRE A+Y++ IT +D+ K + ++TV V D NDN+P FSQ Y V +
Sbjct: 403 LVTNGALDRESQAEYNITITVSDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IG+VSATD D +V Y L P ++LV I G+
Sbjct: 463 ----NNSPALH------IGTVSATDRDAGANAQVTYSLLPPRDPHLPLASLVSINADNGQ 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ-----L 221
L + ++ +E+ V A D SP+ ++ +V + N+P VL Q
Sbjct: 513 LFALRSLDYEALQAFEVRVGAADRGSPALSSQALVRVLVLDDNDNAPFVLYPLQNGSAPC 572
Query: 222 LQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDE 281
+++ R +EA + + K + + D + F L K TE F +
Sbjct: 573 TELVPRAAEAGYLVTK------------VVAVDGDSGQNAWLSFQLLKATEPGLFGV--- 617
Query: 282 NPWITVDENGDVRVKK 297
W NG+VR +
Sbjct: 618 --WA---HNGEVRTAR 628
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 35 GNDNHTFALKNPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK 91
GN+N +P +H R + + LV ++DREE A+ + +TA D +
Sbjct: 163 GNNNIQNYSISPNSHFRVSTRTRGDGRKYPELVLVKELDREEQAELRVTLTALDGGSPPR 222
Query: 92 A-ETHVTVDVLDENDNSPVFSQKVYR 116
+ V + VLD NDN+P F QK+Y+
Sbjct: 223 SGAAQVRILVLDVNDNAPEFVQKLYQ 248
>gi|327270411|ref|XP_003219983.1| PREDICTED: protocadherin gamma-A6-like [Anolis carolinensis]
Length = 812
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 18/122 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE++ Y L++TATD + T + V VLD NDN+PVFSQ +Y + +
Sbjct: 193 LVLKELLDREELSVYDLILTATDGGDPVRSGTTQIKVRVLDANDNAPVFSQPIYEVTIKE 252
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSN----LVVIVPQTGELLL 174
+ K S++ VSATD D +V Y + + L ++ TGE++L
Sbjct: 253 ----------NIPKGSTVAFVSATDLDEGLNGEVKYTIRKITKSDFPLFLLNSTTGEIIL 302
Query: 175 TG 176
TG
Sbjct: 303 TG 304
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 11/112 (9%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH 95
N T ++ N ++ ST++ LVT+ +DRE + +++ ITATD GI T
Sbjct: 378 NGEITCSVPNNLPFQLEKSTDNFYS--LVTNSALDRECLPTFNITITATD-HGIPSLSTT 434
Query: 96 --VTVDVLDENDNSPVFSQKVYRFIV------GDLKSSLNSNVSHWKKFSSI 139
+ + VLD NDN PVF + Y + + G L SL +N W++ + I
Sbjct: 435 TVIALHVLDTNDNPPVFEKSEYTYYLIENNNRGSLIFSLRANDPDWEENARI 486
>gi|332030986|gb|EGI70612.1| Protein dachsous [Acromyrmex echinatior]
Length = 2470
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 114/244 (46%), Gaps = 36/244 (14%)
Query: 69 IDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE + +++L + A D A V V VLD+NDN P F + Y F +L +L
Sbjct: 190 LDREILDRHTLTVLAIDNGSPAATASASVLVMVLDDNDNDPRFEKDFYGF---ELLENLP 246
Query: 128 SNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE 184
S + +GSVSA D D K + Y + ++ + P TGE ++T +P + +
Sbjct: 247 SG-------TVVGSVSAIDPDIGKNSLLRYTVVQANSSFTVDPDTGE-IITREPLDRETK 298
Query: 185 --YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRR 239
+EL +EA D +PSR AR +V + NSP + D Q ++ + E P E R
Sbjct: 299 SVHELVLEARDQGTPSRAARVSLKVTVLDVNDNSPEIVDPQ-GDVVSVREEQPPGTEVAR 357
Query: 240 VTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
V RA+ +D E + +++ K+ + + + + +P G +R K
Sbjct: 358 V-RAM----DMDLGE-----NASVTYSIPKDRDSDGYNVFTIDPI-----TGMIRTKAVL 402
Query: 300 DFEE 303
D EE
Sbjct: 403 DHEE 406
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 117/272 (43%), Gaps = 50/272 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV- 86
+ YSI GN F L NP+T GVL + ++DRE V +Y L I+A D
Sbjct: 895 IFYSIESGNIGAKFVL-NPST-----------GVLSML--NLDRENVPKYVLTISAKDRG 940
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVYR-FIVGDLKSSLNSNVSHWKKF--------- 136
+ +A ++TV VLD NDN+P F Q + F+ G S+ +N K
Sbjct: 941 RPSREAYCNLTVIVLDINDNAPSFVQNLNSGFLYG---SNYPANYYPSKYMTTISEDVPP 997
Query: 137 -SSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE--YELTVE 190
SS+ SV A D D K+ Y +A ++ + V ++ T P + + Y V
Sbjct: 998 DSSVMSVKAIDPDQGVNGKITYAIAEETSWLFRVDNLTGVVTTAGPLDRERQSNYTFLVV 1057
Query: 191 AHDL-QSPSRYAREPAQVWL---QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRP 246
A D ++ P ++ + N+P+ + E P R T+ +
Sbjct: 1058 ATDSGMYDAKRTSIPVEIIISDINDNAPIFE------------EYPFRTRVPISTKPGQN 1105
Query: 247 TKRIDFSETDGEMEGRIVFALEKETEREKFKI 278
R+ + D + G IV++L E E+ KF+I
Sbjct: 1106 ILRVSAKDADDGVNGDIVYSLINEQEKPKFRI 1137
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 72/151 (47%), Gaps = 21/151 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D E ++Y+L + A+D GI++A T +TV V D NDN+P F Q VY +
Sbjct: 1500 LDAEMRSEYTLRVIASD--GIHEATTDLTVRVTDLNDNTPQFKQAVYVAV---------- 1547
Query: 129 NVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDV- 183
+S + I +V+ATD D +V Y L P + P TG L + S +
Sbjct: 1548 -LSEGQGKQEILTVNATDDDLSEENSRVRYYLLRPVKGFSVDPVTGVLTVNHTAISRPIP 1606
Query: 184 -EYELTVEAHDLQSPSRYAREPAQVWLQFNS 213
E +L + A D P+ A V ++F+S
Sbjct: 1607 KEMDLAIVAEDHGKPA--ASSVCSVVVRFSS 1635
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 81/173 (46%), Gaps = 26/173 (15%)
Query: 37 DNHTFALKNP-TTHEIRNSTESKSGVLLVTSGDI-DREEVAQYSLVITATDVKGINKAET 94
DN TF++ N +++ ST + VT D+ DREEV+ YS+ I A K ++ T
Sbjct: 792 DNVTFSIPNGVASNKFAISTNGQ-----VTLRDLLDREEVSHYSVSILARSNKLLDV--T 844
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK--- 151
+ V V+DENDNSP F S V ++ S I ++ATD D K
Sbjct: 845 TLEVIVMDENDNSPEFRP----------GSCYTLAVPENQETSVIHVIAATDLDDGKNGE 894
Query: 152 VAYKLAVPSNL---VVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYA 201
+ Y + N+ V+ P TG L + + +Y LT+ A D PSR A
Sbjct: 895 IFYSIE-SGNIGAKFVLNPSTGVLSMLNLDRENVPKYVLTISAKDRGRPSREA 946
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 24/179 (13%)
Query: 34 QG-NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA 92
QG N T+A+ T+ R ++ +GV+ T+G +DRE + Y+ ++ ATD +
Sbjct: 1011 QGVNGKITYAIAEETSWLFR--VDNLTGVV-TTAGPLDRERQSNYTFLVVATDSGMYDAK 1067
Query: 93 ETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-- 148
T + V+++ D NDN+P+F + +R V K +I VSA DAD
Sbjct: 1068 RTSIPVEIIISDINDNAPIFEEYPFRTRVP----------ISTKPGQNILRVSAKDADDG 1117
Query: 149 --GDKVAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAR 202
GD + Y L I P TGE+ + D+ + Y L V A D +P + A+
Sbjct: 1118 VNGD-IVYSLINEQEKPKFRIHPSTGEVTASLSLSQDNGKTYYLEVLAQDKGNPPKCAK 1175
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATD--VKGINKAET-HVTVDVLDENDNSPVF 110
+ +S +G L + + +DREE+ Q++L++ A+D + G A T + VLDENDN PVF
Sbjct: 600 TVDSLTGALTL-AKQLDREEIMQHTLILKASDRALPGEQLASTVTAKIIVLDENDNDPVF 658
>gi|297295289|ref|XP_002804604.1| PREDICTED: protocadherin beta-6 isoform 2 [Macaca mulatta]
Length = 794
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 69/147 (46%), Gaps = 22/147 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ K + +TV V D NDN+P F+Q Y V +
Sbjct: 401 LVTDGALDRESRAEYNITITVTDLGTPRLKTQQSITVLVSDVNDNAPAFTQTSYTLFVRE 460
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H IGSVSATD D +V Y L P + LV I G
Sbjct: 461 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLPSLVSISADNGH 510
Query: 172 LLLTGDPPSDDV-EYELTVEAHDLQSP 197
L + + E+E V A D SP
Sbjct: 511 LFALRSLDYEALQEFEFRVGATDRGSP 537
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 33 TQGNDNHTFALKNPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK 91
+ G ++T + NP H + RN +E + LV +DREE + +L +TA D +
Sbjct: 163 SNGLQSYTIS-SNPHFHVLTRNRSEGRKFPELVLDKPLDREEQPRLTLTLTALDGGSPPR 221
Query: 92 AET-HVTVDVLDENDNSPVFSQKVY 115
+ T + + VLD NDN P F+Q++Y
Sbjct: 222 SGTSEIHIQVLDINDNIPEFAQELY 246
>gi|332019420|gb|EGI59904.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Acromyrmex echinatior]
Length = 3467
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 105/246 (42%), Gaps = 36/246 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+VT +DREE +Y + + ATD G V V + DENDN+PVF + Y
Sbjct: 1332 IVTRKKLDREEQKRYEIPVMATDGGG-RSGFVMVRVKIGDENDNAPVFLLREY------- 1383
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPS-----NLVVIVPQTGELLLTGD 177
K+++ N+S F I + A + + K+ Y + P +L+ I P TG L L
Sbjct: 1384 KATIQGNLSLNTPFLKIRAQDADEDEAAKIVYSIYEPQTSPARSLLGINPDTGSLYLQKS 1443
Query: 178 P-PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIE 236
P ++ +EL + A D + +A P ++ ++ + + +RK + E
Sbjct: 1444 AMPWENQLFELFIRAEDKGLTTHHADVPLSIY------IMGFHDVPPLFERKEDKFFVRE 1497
Query: 237 KRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
V + K + T+ + RIV E +NP T+D +G + +
Sbjct: 1498 DSSVGTPITKLKTV----TNSTVTYRIVSGDE------------DNPLFTIDSHGQITLA 1541
Query: 297 KRWDFE 302
+ D E
Sbjct: 1542 RPLDRE 1547
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 31/123 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN++ F + ++K+GVL + +D E Y L I A D
Sbjct: 2037 IYYSIVGGNEHKKFQI------------DAKTGVLTIAE-QLDYERARDYFLTIQAID-G 2082
Query: 88 GINKAETHVTVD--VLDENDNSPVFSQKVYRFIV---------------GDLKSSLNSNV 130
GI H TV+ V D NDN+P+FS+ YR V DL S N NV
Sbjct: 2083 GIPPLSNHATVNITVTDSNDNAPIFSEVSYRAFVREDAKTGEKVTQIYANDLDSEENGNV 2142
Query: 131 SHW 133
S++
Sbjct: 2143 SYY 2145
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 63/114 (55%), Gaps = 21/114 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN + GT VK + SS +++ I +GN + TF + NP+T GV
Sbjct: 458 ENQQLGTYVKHVEARSTSS-------LQFEIVRGNRDDTFFV-NPST-----------GV 498
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
+++ + ++D E+ ++L ++AT++ G + A +V V VLD NDN+P F Q +Y
Sbjct: 499 IVIKN-ELDYEKTKFFNLTVSATNMAGAS-ATCNVIVHVLDRNDNAPRFLQALY 550
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 15/93 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-VKG 88
YSIT+GND FAL + +GV+ V ++D E+ QY L + ATD V G
Sbjct: 1000 YSITKGNDFEEFAL------------DFNTGVIYVVD-ELDYEQKKQYELTVRATDSVSG 1046
Query: 89 INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+ AE V++ +LD ND P F+Q Y V +
Sbjct: 1047 V-YAEVLVSILILDVNDCPPEFTQDSYNISVSE 1078
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 118/274 (43%), Gaps = 34/274 (12%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT----DVKGINK 91
N++ F++ NPT I T SG + DRE Y L++ A D +
Sbjct: 789 NEHIIFSILNPTDMFIIGPT---SGAIRTNGIRFDREVCDHYELIVEAKSHPPDREKPRV 845
Query: 92 AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GD 150
A V V +LD NDN P+F Y +V S+++ +K I V A D D GD
Sbjct: 846 AHVIVNVTILDINDNCPMFVNLPYYAVV-----SVDA-----QKGDIITKVHAIDMDSGD 895
Query: 151 --KVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQV 207
+V Y+L L + +TGE+ L + + EY+LT+ A+D P +
Sbjct: 896 NGEVRYELKKGHGELFKVCRKTGEISLKQNLEGHNREYQLTIAAYD------GGITPCSI 949
Query: 208 WLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFAL 267
+ N V+ ++ + + D++ +E V + + + + + ++++++
Sbjct: 950 EVPVNVKVI--DRSMPVFDKQFYTDSVLESIEVHSPLALSI-----QAESPLNRKLIYSI 1002
Query: 268 EKETEREKFKIRDENPWITVDENGDVRVKKRWDF 301
K + E+F + I V + D KK+++
Sbjct: 1003 TKGNDFEEFALDFNTGVIYVVDELDYEQKKQYEL 1036
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVD--VLDENDNSPVFS 111
S + K+G + VT+ +DREE+A Y L + A D GI + V V+ VLD NDN P+FS
Sbjct: 2156 SIDRKTGQIAVTA-PLDREEIASYVLEVHARD-NGIPMLSSFVMVNIEVLDANDNPPLFS 2213
Query: 112 QKVYRFIV 119
Y +V
Sbjct: 2214 LPNYTAVV 2221
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 16/94 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ + IT G+ F +IR++ E + + +DRE + +Y L I TD K
Sbjct: 1728 IEFYITSGDSRSQF--------QIRSTGE------VYVAKSLDRETIDRYELQIVGTDGK 1773
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+ ET VTV VLD NDN P + YR I+ +
Sbjct: 1774 YV--FETKVTVQVLDVNDNPPYCLRYRYREILSE 1805
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 52/111 (46%), Gaps = 15/111 (13%)
Query: 6 SGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVT 65
S G L +L P+ +R+ +T G++N F+L + ++GVL T
Sbjct: 1807 SHPGAYVLTVLATDYDDEPNAKLRFYLT-GDNNDKFSL------------DKETGVLK-T 1852
Query: 66 SGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVY 115
G +DRE A+YSL D K + + + + V D NDN+P F+ Y
Sbjct: 1853 VGQLDRETQAKYSLTAHVQDRDKPTWECSSQLEILVSDLNDNAPKFTMSTY 1903
>gi|449500756|ref|XP_004174871.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Taeniopygia
guttata]
Length = 4576
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 124/282 (43%), Gaps = 44/282 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I GN + FA+ NP SGV+ VT +D E + Y+L + T++
Sbjct: 1692 VVYEIKDGNTDDAFAI-NP-----------NSGVI-VTQKILDFETLPFYALTVQGTNMA 1738
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G++ T V V + DENDN PVF Q Y ++ + +S+NS V K + + A DA
Sbjct: 1739 GLSSNAT-VLVHLQDENDNPPVFMQAEYTGLISE-SASINSVVLTDKNIPLV--IRAADA 1794
Query: 148 DGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQSPSRY 200
D + + Y++ PS I TG + +++ D ++ + +V+ HD P Y
Sbjct: 1795 DKESNALLVYQIVEPSVRQYFAIDSSTGAIRTVMSLDYEETNI-FHFSVQVHDTGIPRLY 1853
Query: 201 AREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKR------IDFSE 254
A A V + +ID P + T + PT + ++ ++
Sbjct: 1854 AEYAANV-------------TIYVIDINDCPPVFSRELYETSLLVPTYKGVKVIGVNATD 1900
Query: 255 TDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
D + ++++++ + EKF I + ITV +R +
Sbjct: 1901 ADSGIFSQLIYSIIEGNIGEKFSINPKTGDITVQNTTQLRSR 1942
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 30/198 (15%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L I AS + + YSI GN++ F++ +S +G + +
Sbjct: 3234 GTEVLQIHAASRDIEANAEITYSIVSGNEHGKFSI------------DSTTGAIFIIES- 3280
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+D E +Y L + ATD + ++ V ++V D NDNSPVFSQ Y ++ + + L
Sbjct: 3281 LDYESSHEYYLTVEATDGGTPSLSDVVTVNINVTDINDNSPVFSQDTYTAVISE-DAMLE 3339
Query: 128 SNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSDD 182
S+ +V A DADG ++V Y + N I P GE+ +T +
Sbjct: 3340 ---------QSVITVMADDADGPSNNRVHYTIIDGNQGNPFTIDPTRGEIKVTKLLDREK 3390
Query: 183 VE-YELTVEAHDLQSPSR 199
+ Y LTV+A D SP +
Sbjct: 3391 ISGYTLTVQASDNGSPPK 3408
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 47/91 (51%), Gaps = 13/91 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ NP K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1169 LSYKITSGNPQGFFSI-NP-----------KTGLITTTSRKLDREQQGEHILEVTVTDNG 1216
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRF 117
K+ V V VLDENDN P F QK Y+
Sbjct: 1217 TPAKSTIARVIVKVLDENDNKPQFLQKFYKI 1247
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 78/174 (44%), Gaps = 34/174 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N I+N + + +DREE Y L ITATD
Sbjct: 2951 VFYYITGGDPLGQFAIEN-----IQNEWK------VYVKKPLDREEKDNYLLNITATD-- 2997
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD--LKSSLNSNVSHWKKFSSIGSVSAT 145
G A+ V V VLD NDNSPV + +Y V + L L I VSAT
Sbjct: 2998 GTFAAKAVVEVKVLDANDNSPVCEKTLYADSVPEDALPGKL------------IMQVSAT 3045
Query: 146 DAD---GDKVAYKL-AVPSNLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHD 193
DAD ++ Y L + + P TGEL L+ D V Y L V+A D
Sbjct: 3046 DADIRSNAEITYTLHGTGAEKFRLTPDTGELKTLMALDREQQAV-YHLLVKATD 3098
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y+I GN + F + +PT EI+ + +DRE+++ Y+L + A+D
Sbjct: 3358 VHYTIIDGNQGNPFTI-DPTRGEIK------------VTKLLDREKISGYTLTVQASDNG 3404
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
K T V +DV D NDN PVFS+ Y I+
Sbjct: 3405 SPPKLNTTTVNIDVSDVNDNPPVFSKGNYSVII 3437
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKV 114
+S +G++L T+ +D E++ Q+ L+I A D + ++T VTVDV D NDN P+FSQ +
Sbjct: 2333 DSSTGLIL-TAKTLDYEQIKQHKLLIRAVDGGMLPLSSDTIVTVDVTDLNDNPPLFSQLL 2391
Query: 115 YRFIVGDL 122
Y + +L
Sbjct: 2392 YEAKISEL 2399
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 107/254 (42%), Gaps = 44/254 (17%)
Query: 50 EIRNSTESKSGV----------LLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVT 97
EIR S SG+ ++ T+ +DRE + Y L + ATD +G+ + +
Sbjct: 1063 EIRYSIRDGSGIGVFRIDEEKGIIETADHLDRETTSHYWLTVYATD-QGVVPLSSFIEIY 1121
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAY 154
++V D NDN+P ++ VY V + + K S+ + A D D +K++Y
Sbjct: 1122 IEVGDVNDNAPQTTEPVYYPEV----------MENSPKDVSVIQIEAFDPDSSSSEKLSY 1171
Query: 155 KLAV--PSNLVVIVPQTGELLLTGDPPSDDVE------YELTVEAHDLQSPSRYAREPAQ 206
K+ P I P+TG L+T D E E+TV + + S AR +
Sbjct: 1172 KITSGNPQGFFSINPKTG--LITTTSRKLDREQQGEHILEVTVTDNGTPAKSTIARVIVK 1229
Query: 207 VWLQF-NSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVR-PTKRIDFSETDGEMEGRIV 264
V + N P Q LQ K P R + R A R P R+ ++ D I
Sbjct: 1230 VLDENDNKP-----QFLQKF-YKIRLPERGKPERERTARREPIYRVIAADKDEGPNAEIS 1283
Query: 265 FALEKETEREKFKI 278
+++E E KF I
Sbjct: 1284 YSIEDGDEHGKFFI 1297
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 17/89 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV-AQYSLVITATDV 86
+ YSI GND F + SK+G++ ++ ++ R+ + + Y L ++ +D
Sbjct: 2422 LEYSILTGNDQKNFVIN------------SKTGIITIS--NLRRQTLKSHYKLNVSVSD- 2466
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVY 115
G+ ++ V + V+ N +SPVFSQ Y
Sbjct: 2467 -GVFRSSAQVHITVISANMHSPVFSQNEY 2494
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 58/123 (47%), Gaps = 27/123 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSIT G+ + F + T GV V + +D E Y L + ATD
Sbjct: 2211 VFYSITGGDPFNQFTINFNT------------GVXNVVA-PLDFESHPAYKLSVRATD-- 2255
Query: 88 GINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+N A V VD++ D NDN PVF+++ Y I ++S+ +S+ VSAT
Sbjct: 2256 SLNGAHADVFVDIIVEDINDNPPVFTEQSY--IATLSEASVIG--------TSVAQVSAT 2305
Query: 146 DAD 148
DAD
Sbjct: 2306 DAD 2308
>gi|297295295|ref|XP_001091293.2| PREDICTED: protocadherin beta-10 isoform 2 [Macaca mulatta]
Length = 809
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 55/99 (55%), Gaps = 16/99 (16%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+DRE A+Y + IT TD+ GI K E ++TV V D NDNSP+F+Q Y V +
Sbjct: 421 LDRESTAEYRITITVTDL-GIPRLKTEYNITVLVSDINDNSPIFTQTSYTLFVRE----N 475
Query: 127 NSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNL 162
NS H IGSVSATD D +V Y L +P +L
Sbjct: 476 NSPALH------IGSVSATDRDSGTNAQVTYSLLLPQDL 508
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
LV +DREE + SL +TA D ++ T + + VLD NDN+P F+Q +Y
Sbjct: 206 LVLDKALDREEQGELSLTLTALDGGSPPRSGTSTIGIVVLDVNDNAPQFAQALY 259
>gi|109079008|ref|XP_001090348.1| PREDICTED: protocadherin beta-6 isoform 1 [Macaca mulatta]
Length = 793
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 69/147 (46%), Gaps = 22/147 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ K + +TV V D NDN+P F+Q Y V +
Sbjct: 400 LVTDGALDRESRAEYNITITVTDLGTPRLKTQQSITVLVSDVNDNAPAFTQTSYTLFVRE 459
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H IGSVSATD D +V Y L P + LV I G
Sbjct: 460 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLPSLVSISADNGH 509
Query: 172 LLLTGDPPSDDV-EYELTVEAHDLQSP 197
L + + E+E V A D SP
Sbjct: 510 LFALRSLDYEALQEFEFRVGATDRGSP 536
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 33 TQGNDNHTFALKNPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK 91
+ G ++T + NP H + RN +E + LV +DREE + +L +TA D +
Sbjct: 162 SNGLQSYTIS-SNPHFHVLTRNRSEGRKFPELVLDKPLDREEQPRLTLTLTALDGGSPPR 220
Query: 92 AET-HVTVDVLDENDNSPVFSQKVY 115
+ T + + VLD NDN P F+Q++Y
Sbjct: 221 SGTSEIHIQVLDINDNIPEFAQELY 245
>gi|395541765|ref|XP_003772809.1| PREDICTED: protocadherin Fat 4 [Sarcophilus harrisii]
Length = 5148
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 85/184 (46%), Gaps = 38/184 (20%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+ YS+ +GN+ FA+ + T ++ +G +D E A YSL+I A D
Sbjct: 1410 LIHYSVVKGNEEKMFAIDSATGQ-------------VILAGQLDHEATASYSLLIQAVDS 1456
Query: 87 KGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVSA 144
++ T +++D+LDENDN+P F KS+L +V + + SV+A
Sbjct: 1457 GTVSLNSTCTLSIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVTSVTA 1505
Query: 145 TDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQ 195
TD+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1506 TDSDSGDNADIHYSITGTNNHGTFSISPNTGGIFLA---KKLDFETQPLYKLNITAKDQG 1562
Query: 196 SPSR 199
P R
Sbjct: 1563 RPPR 1566
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 61/126 (48%), Gaps = 25/126 (19%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ V+YSI+ G+ + R S +GV+ T +DREE Y L + A
Sbjct: 886 PNGTVKYSISAGDTS-------------RFQIHSHTGVI-STKMVLDREEKTAYQLQVVA 931
Query: 84 TDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
TD + + VT+ VLD DN PVFSQ VY F+V + NV+ +GSV
Sbjct: 932 TDGGHLQSPNQAIVTITVLDTQDNPPVFSQAVYSFVVFE-------NVALGYH---VGSV 981
Query: 143 SATDAD 148
SA+ D
Sbjct: 982 SASTMD 987
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 89/176 (50%), Gaps = 31/176 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y+I GN ++F++ + +T EIR+ +DRE+V+QY L +
Sbjct: 2867 PNGQLEYNIVNGNTENSFSIHH-STGEIRSIRS------------LDREKVSQYVLTVRC 2913
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D KG T VTV +VLDENDN+P FSQ ++ V + N+ + + ++
Sbjct: 2914 SD-KGTPPQSTTVTVIINVLDENDNAPRFSQ-IFTAPVPE-----NAPLGY-----TVTR 2961
Query: 142 VSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ +D D A Y + S I P TG+++++ +D + Y + V AHD
Sbjct: 2962 VTTSDEDIGVNAVSRYSITDTSLPFTINPSTGDIIISRPLNREDTDRYRIRVSAHD 3017
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 84/188 (44%), Gaps = 26/188 (13%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN+ F L N + + + LV+ G +DRE A Y L++ D KG
Sbjct: 342 YRIVGGNEAGRFRLD-----ITLNPSGEGAFLHLVSRGGLDREATAYYQLLVEVED-KGE 395
Query: 90 NKAETH--VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
K + V V V D NDN PVF Y+ V + ++ V SS+ VSA DA
Sbjct: 396 PKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE-----DAAVG-----SSVLQVSAADA 445
Query: 148 D---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSPSRYA 201
D + Y+L + P+TG L+T P D +Y LT++AHD PS
Sbjct: 446 DEGTNADIRYQLQEDGGPFHMDPETG--LITVREPLDYEARRQYSLTLQAHDRGVPSLTG 503
Query: 202 REPAQVWL 209
R A + L
Sbjct: 504 RAEALIQL 511
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ Y+L + ATD KG + T V V +LD NDN+PVF++ +Y+
Sbjct: 2275 TGELDREEVSNYTLTVVATD-KGQPPLSSSTEVAVIILDINDNNPVFAKALYK 2326
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 33/192 (17%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+ Y I+ GN+N FA+ + +G L + +D E ++ + I+ATD
Sbjct: 3291 LITYHISSGNENGLFAIN------------ASTGTLTLAK-PLDYELHQKHEMTISATD- 3336
Query: 87 KGINKAETH---VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
G +A T + ++VLD NDNSP+F + Y V + + +++ ++
Sbjct: 3337 -GGWRARTSYCSIIINVLDVNDNSPIFIPEEYSPTV----------LENAPSGTTVMRLN 3385
Query: 144 ATDADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
ATDAD +AY L + S+L VI P +G + G + + Y LTV+A ++
Sbjct: 3386 ATDADSGSNAVIAYSLQSSDSDLFVIDPNSGVITTQGFLDYETKQSYHLTVKAFNVPDEE 3445
Query: 199 RYAREPAQVWLQ 210
R + + L+
Sbjct: 3446 RCSFATVNIQLK 3457
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 108/271 (39%), Gaps = 47/271 (17%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
RYSIT + T NP+T +I + S ++RE+ +Y + ++A D
Sbjct: 2976 RYSITDTSLPFTI---NPSTGDI------------IISRPLNREDTDRYRIRVSAHDSGW 3020
Query: 89 INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
T V + V D NDN+P F + Y +L + + + VSATD D
Sbjct: 3021 --TVSTDVAIFVTDVNDNAPRFKKPSYYLDCPELT----------EIGAKVAQVSATDPD 3068
Query: 149 ---GDKVAYKLAVPSNLVVIVPQTGELL---------LTGDPPSDDVEYELTVEAHDLQS 196
+V Y + S I TGE+ +TG + + V + D S
Sbjct: 3069 EGSNGQVFYFIKSQSEFFRINATTGEIFNKQALRYRNVTGSSNVNINRHSFIVTSSDRGS 3128
Query: 197 PSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETD 256
PS + + + V ++ Q ++ K P R T+ ++ T ID + D
Sbjct: 3129 PSLLSETTVTINI-----VDSNDNAPQFLNSKYFTPVTKNVRVGTKLLKVTA-ID--DKD 3180
Query: 257 GEMEGRIVFALEKETEREKFKIRDENPWITV 287
+ I + + ET EKFK+ W++V
Sbjct: 3181 FGLNSEIEYFISNETPVEKFKLDSTTGWVSV 3211
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 61/151 (40%), Gaps = 29/151 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ T L T+ IDREE + Y L + A+
Sbjct: 992 ITYVITTGDQKGVFAINQVTGQ-------------LTTASIIDREEQSFYQLKVVAS--G 1036
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G+ ET V + V D NDN+P F Q V V V +W+ SI A D
Sbjct: 1037 GMVTGETIVNITVKDLNDNAPHFLQAVEWVNV----------VENWQAGHSIFQAKALDP 1086
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLL 174
D V Y L P NL I + G + L
Sbjct: 1087 DEGINGMVLYSLKQNPKNLFTIDEKNGNISL 1117
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 79/156 (50%), Gaps = 32/156 (20%)
Query: 57 SKSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQK 113
S++G + V SG +DRE+ + SL + A + ++G + E V + +LD ND PVFS +
Sbjct: 3518 SRTGQIYV-SGFLDREKEERISLKVLAKNSGSIRGADVDEVTVNITILDAND-PPVFSLE 3575
Query: 114 VYRFIVGD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNL 162
+Y + + S+ +S+ V W +FS IGS G++ + +
Sbjct: 3576 IYNVQISEGVPIGTHVTFVSAFDSDSVPSWSRFSYFIGS-------GNE--------NGV 3620
Query: 163 VVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSP 197
I PQTG++ +T + + + Y LTV A DL +P
Sbjct: 3621 FSINPQTGQITVTAELDRETLPVYNLTVLAVDLGTP 3656
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G + + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1920 GDGSRIMQLTAMDADEGANALVTYAIISGADD-SFHI------------DPESGELIATK 1966
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + + D ND+ P FS+ VY F
Sbjct: 1967 -RLDRERRSKYSLLVRADD--GLQSSDMRINITISDVNDHIPKFSRPVYSF 2014
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 16/115 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + + A + + VRYS+ GN+N F + +S +G+
Sbjct: 2331 ENTLTGTDI--VQVYAADGDEGTNGQVRYSLLSGNENQEFRI------------DSVTGI 2376
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVY 115
L V +DRE+ A YSL + + D + + T V + +LD ND PVF Y
Sbjct: 2377 LSVAK-PLDREKKAMYSLTVQSADRGSSPRMDTTKVDIILLDINDFVPVFELSPY 2430
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 28/150 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y++ GN+++ F L S SG L V +DRE + L+ITATD
Sbjct: 2461 LTYTLIGGNEDNAFIL-------------SASGELKVRQ-KLDRETKEKCILLITATDSG 2506
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
T V V V D NDN P F+ K Y + + S + VSA+D
Sbjct: 2507 SPALTGTGTVNVIVSDVNDNVPTFAHKTYSATISE----------DAPTGSDVLLVSASD 2556
Query: 147 ADGDK---VAYKLAVPSNLVVIVPQTGELL 173
AD ++Y+L ++ I P TG+++
Sbjct: 2557 ADASTNAVISYRLIGGNSQFTINPSTGQII 2586
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVF 110
L T +DREE A YSL++ A D+ + T V V +LD NDNSPVF
Sbjct: 807 LSTISSLDREEQAFYSLLVLAVDLGSPPQTSLTRVNVSLLDVNDNSPVF 855
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 108/263 (41%), Gaps = 49/263 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV- 86
+ YSIT G+ F T K+G+L + +DRE + Y+LVI D+
Sbjct: 2145 LSYSITSGDSLGQF-------------TVDKNGILKIRQ-TLDRESQSFYNLVIQVHDMP 2190
Query: 87 ---KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
+ V++ +LD NDN+P F ++ + + + +
Sbjct: 2191 LSSTSSYTSTAQVSIILLDVNDNAPTFISPKLTYVPENTPTD-----------TVVFKAQ 2239
Query: 144 ATDADG---DKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDL-QSP 197
ATD D + Y L P N I GE+ LTG+ ++V Y LTV A D Q P
Sbjct: 2240 ATDRDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDKGQPP 2299
Query: 198 SRYAREPAQVWLQF--NSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSET 255
+ E A + L N+PV ++A +++E T ++ ++
Sbjct: 2300 LSSSTEVAVIILDINDNNPVF------------AKALYKVEINENTLTGTDIVQVYAADG 2347
Query: 256 DGEMEGRIVFALEKETEREKFKI 278
D G++ ++L E ++F+I
Sbjct: 2348 DEGTNGQVRYSLLSGNENQEFRI 2370
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 16/89 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATDV 86
+RYSI GN+ F + + SG V +G +DRE +Q L I+A D
Sbjct: 676 LRYSIISGNELDWFHISD------------HSGLVTTAAAGGLDRERASQVVLNISARD- 722
Query: 87 KGINKAETH--VTVDVLDENDNSPVFSQK 113
+G++ ++ + V VLD ND PVFSQ+
Sbjct: 723 QGVHPKVSYAQLIVTVLDVNDEKPVFSQE 751
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 65/153 (42%), Gaps = 26/153 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN++ GT V L + A S + + I GN+ F E++ S +
Sbjct: 537 ENAQVGTVVALLTVTDADS-PAANGNISVQILGGNEQRHF--------EVQRSKVPNLSL 587
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGI------NKAETHVTVDVLDENDNSPVFSQKVY 115
+ V S +DRE + Y+L ++ +D G + + + V D ND+ PVFSQ VY
Sbjct: 588 IKVASA-LDRERIPSYNLTVSVSDNHGAPPGAVARSSVASLVIFVNDINDHPPVFSQLVY 646
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
R + + S + VSATD D
Sbjct: 647 RVNLSE----------EAPPGSYVSGVSATDGD 669
>gi|345793728|ref|XP_544301.2| PREDICTED: protocadherin beta-6 [Canis lupus familiaris]
Length = 796
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 114/256 (44%), Gaps = 51/256 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G +DRE A+Y++ IT +D+ K + ++TV V D NDN+P FSQ Y V +
Sbjct: 403 LVTNGALDRESQAEYNITITVSDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IG+VSATD D +V Y L P ++LV I G+
Sbjct: 463 ----NNSPALH------IGTVSATDRDAGANAQVTYSLLRPRDPHLPLASLVSINADNGQ 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ-----L 221
L + ++ +E+ V A D SP+ ++ +V + N+P VL Q
Sbjct: 513 LFALRSLDYEALQAFEVRVGAADRGSPALSSQALVRVLVLDDNDNAPFVLYPLQNGSAPC 572
Query: 222 LQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDE 281
+++ R +EA + + K + + D + F L K TE F +
Sbjct: 573 TELVPRAAEAGYLVTK------------VVAVDGDSGQNAWLSFQLLKATEPGLFGV--- 617
Query: 282 NPWITVDENGDVRVKK 297
W NG+VR +
Sbjct: 618 --WA---HNGEVRTAR 628
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 15/117 (12%)
Query: 45 NPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLD 102
NP H + RN ++ + LV +DREE + L +TA D ++ T + + VLD
Sbjct: 176 NPHFHVLTRNRSDGRKFPELVLDKALDREEQPELRLTLTALDGGSPTRSGTVEIQILVLD 235
Query: 103 ENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
NDN+P F+Q++Y + + NS + S I +VSA D D +V+Y L
Sbjct: 236 INDNAPEFAQELYETQIPE-----NSTLG-----SLIITVSARDLDAGPFGEVSYAL 282
>gi|332234736|ref|XP_003266560.1| PREDICTED: protocadherin beta-14 isoform 1 [Nomascus leucogenys]
gi|441596402|ref|XP_004087311.1| PREDICTED: protocadherin beta-14 isoform 2 [Nomascus leucogenys]
Length = 842
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 82/179 (45%), Gaps = 32/179 (17%)
Query: 32 ITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN- 90
I DN F LK PT K+ LV+ +DRE A+Y++ IT TD+
Sbjct: 426 ICSIQDNLPFFLK-PTF---------KNFFTLVSEKALDRESQAEYNITITVTDLGTPRL 475
Query: 91 KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD 150
K E ++TV V D NDN+PVF+Q Y V + NS H IGSVSATD D
Sbjct: 476 KTEYNITVQVSDVNDNAPVFTQTSYTLFVRE----NNSPALH------IGSVSATDRDSG 525
Query: 151 ---KVAYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
+V Y L P ++LV I G L + ++ +E V A D SP+
Sbjct: 526 TNAQVTYSLLPPQDSHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 584
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 45 NPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDV 100
+P +H +I +S++ K LV +D E+ A+ L +TA D K+ T V + V
Sbjct: 217 SPNSHFYIKIPDSSDRKIYPELVLDRALDYEQEAELRLTVTAVDGGSPPKSGTTLVLIKV 276
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
LD NDN+P F Q +Y V + + + W I ++SA D D K++Y
Sbjct: 277 LDINDNAPEFPQSLYEVQVPE-----DRPLGSW-----IATISAKDLDAGNYGKISYTF 325
>gi|119514214|gb|ABL75877.1| protocadherin 2G2 [Takifugu rubripes]
Length = 941
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 91/187 (48%), Gaps = 41/187 (21%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
RY I Q NDN ++ N V LV +DRE+ + +L++TA D
Sbjct: 169 RY-ILQKNDNFILSVDN-------------KKVELVLENRLDREKQKEINLLLTALDGGS 214
Query: 89 INKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
++ T V V VLD NDN+PVFSQ VY K+SL N + + VSATDA
Sbjct: 215 PQRSGTVVIHVTVLDANDNAPVFSQAVY-------KASLPEN---SPLDTVVMQVSATDA 264
Query: 148 D----GDKVAYKLAVPS----NLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQ 195
D GD V Y L S N+ +I +TGE+ ++G + D E +E+ V+A D
Sbjct: 265 DEGVNGD-VIYNLGHSSEDDANIFIINAKTGEIRVSG---TVDFEENNSFEMRVQAKDGL 320
Query: 196 SPSRYAR 202
+ YA+
Sbjct: 321 GLTSYAK 327
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 10/105 (9%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIV- 119
LVT+G +DRE V+ Y++ I ATD ++ ++T + + V D NDN PVF ++ Y V
Sbjct: 399 LVTTGQLDRELVSDYNITIRATDEGSPPLSSSKT-LHLSVADINDNPPVFEEESYSAYVS 457
Query: 120 -----GDLKSSLNSNVSHWKKFSS-IGSVSATDADGDKVAYKLAV 158
G S+++ W++ + I S+ A + +G V+ ++V
Sbjct: 458 ENNRAGSTLCSVSAGDPDWRQNGTVIYSLLAAEVNGAPVSSYVSV 502
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 21/184 (11%)
Query: 57 SKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYR 116
+K+G + V SG +D EE + + + A D G+ + V +DV D+NDNSP
Sbjct: 291 AKTGEIRV-SGTVDFEENNSFEMRVQAKDGLGLT-SYAKVVIDVTDKNDNSPQIK----- 343
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK-----VAYKLAVPSNLVVIVPQTGE 171
+KS N S +G ++ D D +K + + VP LV +
Sbjct: 344 -----VKSLTNPVPEDVPPGSEVGIINVQDRDSEKNGKVRCSIQQNVPFKLVPSIKNYYS 398
Query: 172 LLLTGDPPSDDV-EYELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDR 227
L+ TG + V +Y +T+ A D SP + + + + N PV ++E +
Sbjct: 399 LVTTGQLDRELVSDYNITIRATDEGSPPLSSSKTLHLSVADINDNPPVFEEESYSAYVSE 458
Query: 228 KSEA 231
+ A
Sbjct: 459 NNRA 462
>gi|395504790|ref|XP_003756730.1| PREDICTED: protocadherin gamma-B5 [Sarcophilus harrisii]
Length = 743
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 99/210 (47%), Gaps = 34/210 (16%)
Query: 51 IRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSP 108
R + S++ L+T G +DRE+ QY++ +TA+D KG T +T+ + D NDN P
Sbjct: 392 FRLESSSRNYYKLLTDGPLDREQTPQYNVTVTASD-KGKPPLSTSKTLTLHIADVNDNPP 450
Query: 109 VFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKL------AVP 159
VF Q Y V + S +SI SVSA+DAD D +V+Y + ++P
Sbjct: 451 VFLQSSYVVYVPENNPS----------GASITSVSASDADLDGNGRVSYSIVSSDLVSLP 500
Query: 160 -SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVW---LQFNSP 214
S+ V + +G + + V +ELT++A D SP+ QV+ L N+P
Sbjct: 501 LSSYVSVNSHSGAIFAQRSFDYEQVRTFELTLQACDAGSPALCTNVTLQVFISDLNDNAP 560
Query: 215 VL-------QDEQLLQMIDRKSEAPHRIEK 237
+ L M+ R SE + + K
Sbjct: 561 NILYPALGPDRSALFDMVPRSSEPGYLVTK 590
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYR 116
LV +DRE+ + + LV+ A D + + ++V D NDN PVFSQ Y+
Sbjct: 194 LVMEKPLDREKQSSHHLVLVAVDGGNPVLSGTAQIRINVTDANDNPPVFSQDFYK 248
>gi|229442259|gb|AAI72772.1| FAT tumor suppressor 1 precursor [synthetic construct]
Length = 990
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 90/195 (46%), Gaps = 25/195 (12%)
Query: 23 HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVIT 82
H V Y I GN F + NP SG + +T +D E + Y+L+I
Sbjct: 602 HSQSSVVYEIKDGNTGDAFDI-NP-----------HSGTI-ITQKALDFETLPIYTLIIQ 648
Query: 83 ATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
T++ G++ T V V + DENDN+PVF Q Y ++ + +S+NS V + + +
Sbjct: 649 GTNMAGLS-TNTTVLVHLQDENDNAPVFMQAEYTGLISE-SASINSVVLTDRNVPLV--I 704
Query: 143 SATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQ 195
A DAD D + Y + PS I TG + +L+ D + + TV+ HD+
Sbjct: 705 RAADADKDSNALLVYHIVEPSVHTYFAIDSSTGAIHTVLSLDYEETSI-FHFTVQVHDMG 763
Query: 196 SPSRYAREPAQVWLQ 210
+P +A A V +
Sbjct: 764 TPRLFAEYAANVTVH 778
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ K+G++ TS +DRE+ ++ L +T TD
Sbjct: 84 LMYKITSGNPQGFFSI------------HPKTGLITTTSRKLDREQQDEHILEVTVTDNG 131
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRF 117
K+ V V +LDENDN P F QK Y+
Sbjct: 132 SPPKSTIARVIVKILDENDNKPQFLQKFYKI 162
>gi|119625019|gb|EAX04614.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_a [Homo
sapiens]
Length = 3377
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 90/195 (46%), Gaps = 25/195 (12%)
Query: 23 HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVIT 82
H V Y I GN F + NP SG + +T +D E + Y+L+I
Sbjct: 1692 HSQSSVVYEIKDGNTGDAFDI-NP-----------HSGTI-ITQKALDFETLPIYTLIIQ 1738
Query: 83 ATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
T++ G++ T V V + DENDN+PVF Q Y ++ + +S+NS V + + +
Sbjct: 1739 GTNMAGLS-TNTTVLVHLQDENDNAPVFMQAEYTGLISE-SASINSVVLTDRNVPLV--I 1794
Query: 143 SATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQ 195
A DAD D + Y + PS I TG + +L+ D + + TV+ HD+
Sbjct: 1795 RAADADKDSNALLVYHIVEPSVHTYFAIDSSTGAIHTVLSLDYEETSI-FHFTVQVHDMG 1853
Query: 196 SPSRYAREPAQVWLQ 210
+P +A A V +
Sbjct: 1854 TPRLFAEYAANVTVH 1868
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + HP VRY I G+ + F + + +R T+
Sbjct: 45 ENSAAKTYV-GHPVKMGVYITHPAWEVRYKIVSGDSENLFKAEEYILGDFCFLRIRTKGG 103
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A T V V VLD ND P+FS Y
Sbjct: 104 NTAIL------NREVKDHYTLIVKALEKNTNVEARTKVRVQVLDTNDLRPLFSPTSYSV- 156
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 157 ------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGVIVLT 207
Query: 176 G 176
G
Sbjct: 208 G 208
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 16/115 (13%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + YSI GN++ F++ +SK+G + + +
Sbjct: 3246 GTEVLQVYAASRDIEANAEITYSIISGNEHGKFSI------------DSKTGAVFIIE-N 3292
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+D E +Y L + ATD ++ T V V+V D NDN+PVFSQ Y ++ +
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVAT-VNVNVTDINDNTPVFSQDTYTTVISE 3346
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1174 LMYKITSGNPQGFFSI------------HPKTGLITTTSRKLDREQQDEHILEVTVTDNG 1221
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRF 117
K+ V V +LDENDN P F QK Y+
Sbjct: 1222 SPPKSTIARVIVKILDENDNKPQFLQKFYKI 1252
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 16/108 (14%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE+ Y L ITATD G ++ V V VLD NDNSPV + +Y ++
Sbjct: 2984 LDREKRDNYLLTITATD--GTFSSKAIVEVKVLDANDNSPVCEKTLY-------SDTIPE 3034
Query: 129 NVSHWKKFSSIGSVSATDAD---GDKVAYK-LAVPSNLVVIVPQTGEL 172
+V K I +SATDAD ++ Y L + + P TGEL
Sbjct: 3035 DVLPGKL---IMQISATDADIRSNAEITYTLLGSGAEKFKLNPDTGEL 3079
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E+ Q+++ + A D G+ ++ VTVDV D NDN P+F Q++Y ++ +
Sbjct: 2348 LDYEQSRQHTIFVRAVD-GGMPTLSSDVIVTVDVTDLNDNPPLFEQQIY-------EARI 2399
Query: 127 NSNVSHWKKFSSIGSVSATDADGDKVAYKL 156
+ + H + + + A +D DK+ Y +
Sbjct: 2400 SEHAPHGHFVTCVKAYDADSSDIDKLQYSI 2429
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 103/250 (41%), Gaps = 36/250 (14%)
Query: 50 EIRNSTESKSGV----------LLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVT 97
EIR S SGV ++ TS +DRE + Y L + ATD +G+ + +
Sbjct: 1068 EIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSHYWLTVFATD-QGVVPLSSFIEIY 1126
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAY 154
++V D NDN+P S+ VY + + + K S+ + A D D DK+ Y
Sbjct: 1127 IEVEDVNDNAPQTSEPVYYPEI----------MENSPKDVSVVQIEAFDPDSSSNDKLMY 1176
Query: 155 KLAV--PSNLVVIVPQTGELLLTG---DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL 209
K+ P I P+TG + T D D E+ L V D SP + A+V +
Sbjct: 1177 KITSGNPQGFFSIHPKTGLITTTSRKLDREQQD-EHILEVTVTDNGSPPK--STIARVIV 1233
Query: 210 QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVR-PTKRIDFSETDGEMEGRIVFALE 268
+ Q LQ K P R + R A R P + ++ D I +++E
Sbjct: 1234 KILDENDNKPQFLQKF-YKIRLPEREKPDRERNARREPLYHVIATDKDEGPNAEISYSIE 1292
Query: 269 KETEREKFKI 278
E KF I
Sbjct: 1293 DGNEHGKFFI 1302
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 15/127 (11%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+ R++ A + L +T +D KA T V V VL N N P F+Q Y K++ +
Sbjct: 426 VKRQQAAHFELEVTTSD----RKASTKVLVKVLGANSNPPEFTQTAY-------KAAFDE 474
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT 188
NV S+ +V + + V Y +A ++ VP + S++++YEL
Sbjct: 475 NVPIGTTVMSLSAVDPDEGENGYVTYSIANLNH----VPFAIDHFTGAVSTSENLDYELM 530
Query: 189 VEAHDLQ 195
+ L+
Sbjct: 531 PRVYTLR 537
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 54/125 (43%), Gaps = 27/125 (21%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET 94
G+ F L NP T E++ ST +DREE A Y L++ ATD G +
Sbjct: 3064 GSGAEKFKL-NPDTGELKTSTP------------LDREEQAVYHLLVRATDGGG-RFCQA 3109
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---K 151
+ + + D NDN+P FS Y V + + + + V ATDAD K
Sbjct: 3110 SIVLTLEDVNDNAPEFSADPYAITV----------FENTEPGTLLTRVQATDADAGLNRK 3159
Query: 152 VAYKL 156
+ Y L
Sbjct: 3160 ILYSL 3164
>gi|426346210|ref|XP_004040777.1| PREDICTED: protocadherin Fat 1 [Gorilla gorilla gorilla]
Length = 4495
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 122/287 (42%), Gaps = 44/287 (15%)
Query: 23 HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVIT 82
H V Y I GN F + NP SG + +T +D E + Y+L+I
Sbjct: 1692 HSQSSVVYEIKDGNTGDAFDI-NP-----------HSGTI-ITQKALDFETLPIYTLIIQ 1738
Query: 83 ATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
T++ G++ T V V + DENDN+PVF Q Y ++ + +S+NS V + + +
Sbjct: 1739 GTNMAGLS-TNTTVLVHLQDENDNAPVFMQAEYTGLISE-SASINSVVLTDRNVPLV--I 1794
Query: 143 SATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQ 195
A DAD D + Y + PS I TG + +L+ D + + TV+ HD+
Sbjct: 1795 RAADADKDSNALLVYHIVEPSVHTYFAIDSSTGAIHTVLSLDYEETSI-FHFTVQVHDMG 1853
Query: 196 SPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKR------ 249
+P +A A V + +ID P + + PT +
Sbjct: 1854 TPRLFAEYAANV-------------TVHVIDINDCPPVFAKPLYEASLLLPTYKGVKVIT 1900
Query: 250 IDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
++ ++ D ++++++ + EKF + + +TV +R +
Sbjct: 1901 VNATDADSSAFSQLIYSITEGNIGEKFSMDYKTGALTVQNTTQLRSR 1947
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + HP VRY I G+ + F + + +R T+
Sbjct: 45 ENSAAKTYV-GHPVKMGVYITHPAWEVRYKIVSGDSENLFKAEEYILGDFCFLRIRTKGG 103
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A T V V VLD ND P+FS Y
Sbjct: 104 NTAIL------NREVKDHYTLIVKALEKNTNVEARTKVRVQVLDTNDLRPLFSPTSYSV- 156
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 157 ------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGVIVLT 207
Query: 176 G 176
G
Sbjct: 208 G 208
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1174 LMYKITSGNPQGFFSI------------HPKTGLITTTSRKLDREQQDEHILEVTVTDNG 1221
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRF 117
K+ V V +LDENDN P F QK Y+
Sbjct: 1222 SPPKSTIARVIVKILDENDNKPQFLQKFYKI 1252
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN +F + +P E++ + +DRE ++ Y+L + A+D
Sbjct: 3277 IHYSIIDGNQGSSFTI-DPVRGEVK------------VTRLLDRETISGYTLTVQASDNG 3323
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+PVFS+ Y I+
Sbjct: 3324 SPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVII 3356
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 104/250 (41%), Gaps = 36/250 (14%)
Query: 50 EIRNSTESKSGV----------LLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVT 97
EIR S SGV ++ TS +DRE + Y L + ATD +G+ + +
Sbjct: 1068 EIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSHYWLTVFATD-QGVVPLSSFIEIY 1126
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAY 154
++V D NDN+P S+ VY + + + K S+ + A D D DK+ Y
Sbjct: 1127 IEVEDVNDNAPQTSEPVYYPEI----------MENSPKDVSVVQIEAFDPDSSSNDKLMY 1176
Query: 155 KLAV--PSNLVVIVPQTGELLLTG---DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL 209
K+ P I P+TG + T D D E+ L V D SP + A+V +
Sbjct: 1177 KITSGNPQGFFSIHPKTGLITTTSRKLDREQQD-EHILEVTVTDNGSPPK--STIARVIV 1233
Query: 210 QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVR-PTKRIDFSETDGEMEGRIVFALE 268
+ Q LQ K P R + R A R P R+ ++ D I +++E
Sbjct: 1234 KILDENDNKPQFLQKF-YKIRLPEREKPDRERNARREPLYRVIATDKDEGPNAEISYSIE 1292
Query: 269 KETEREKFKI 278
E KF I
Sbjct: 1293 DGNEHGKFFI 1302
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 69/149 (46%), Gaps = 27/149 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N I+N + + +DRE+ Y L ITATD
Sbjct: 2954 VTYFITGGDPLGQFAVEN-----IQNEWK------VYVKKPLDREKRDNYLLTITATD-- 3000
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G ++ V V VLD NDNSPV + +Y ++ +V K I +SATDA
Sbjct: 3001 GTFSSKAIVEVKVLDANDNSPVCEKTLY-------SDTIPEDVLPGKL---IMQISATDA 3050
Query: 148 D---GDKVAYK-LAVPSNLVVIVPQTGEL 172
D ++ Y L + + P TGEL
Sbjct: 3051 DIRSNAEITYTLLGSGAEKFKLNPDTGEL 3079
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 18/148 (12%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRF 117
SG + + ++D E +Y L + ATD + ++ V ++V D NDN+PVFSQ Y
Sbjct: 3191 SGAVFIIE-NLDYESSHEYYLTVEATDGGTPSLSDVASVNINVTDINDNTPVFSQDTYTT 3249
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGEL 172
++ + + L S+ +V A DADG + Y + + I P GE+
Sbjct: 3250 VISE-DAVLE---------QSVITVMADDADGPSNSHIHYSIIDGNQGSSFTIDPVRGEV 3299
Query: 173 LLTGDPPSDDVE-YELTVEAHDLQSPSR 199
+T + + Y LTV+A D SP R
Sbjct: 3300 KVTRLLDRETISGYTLTVQASDNGSPPR 3327
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E+ Q+++ + A D G+ ++ VTVDV D NDN P+F Q++Y ++ +
Sbjct: 2348 LDYEQSRQHTIFVRAVD-GGMPPLSSDVIVTVDVTDLNDNPPLFEQQIY-------EARI 2399
Query: 127 NSNVSHWKKFSSIGSVSATDADGDKVAYKL 156
+ + H + + + A +D DK+ Y +
Sbjct: 2400 SEHAPHGHFVTCVKAYDADSSDIDKLQYSI 2429
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 15/127 (11%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+ R++ A + L +T +D KA T V V VL N N P F+Q Y K++ +
Sbjct: 426 VKRQQAAHFELEVTTSD----RKASTKVLVKVLGANSNPPEFTQTAY-------KAAFDE 474
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT 188
NV S+ +V + + V Y +A ++ VP + S++++YEL
Sbjct: 475 NVPIGTTVMSLSAVDPDEGENGYVTYSIANLNH----VPFAIDHFTGAVSTSENLDYELM 530
Query: 189 VEAHDLQ 195
+ L+
Sbjct: 531 PRVYTLR 537
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 18/89 (20%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GN++ F + + ++G+L + S +DRE +Y+L IT D+
Sbjct: 754 YAISGGNEDSCFMI------------DMETGMLKILS-PLDRETTDKYTLNITVYDLGIP 800
Query: 90 NKAE---THVTVDVLDENDNSPVFSQKVY 115
KA HVTV +D NDN P F Q+ Y
Sbjct: 801 QKAAWRLLHVTV--VDANDNPPEFLQESY 827
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 40/85 (47%), Gaps = 14/85 (16%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET 94
G+ F L NP T E++ ST +DREE A Y L++ ATD G +
Sbjct: 3064 GSGAEKFKL-NPDTGELKTSTP------------LDREEQAVYHLLVRATDGGG-RFCQA 3109
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIV 119
+ + + D NDN+P FS Y V
Sbjct: 3110 SIVLTLEDVNDNAPEFSADPYAITV 3134
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 40/88 (45%), Gaps = 13/88 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSIT G+ F + T GV+ V + +D E Y L I ATD
Sbjct: 2214 VFYSITDGDPFSQFTINFNT------------GVINVIA-PLDFEAHPAYKLSIRATDSL 2260
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVY 115
AE V + V D NDN PVF+Q+ Y
Sbjct: 2261 TGAHAEVFVDIIVEDINDNPPVFAQQSY 2288
>gi|73949381|ref|XP_544298.2| PREDICTED: protocadherin beta-3 [Canis lupus familiaris]
Length = 780
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 114/256 (44%), Gaps = 51/256 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G +DRE A+Y++ IT +D+ K + ++TV V D NDN+P FSQ Y V +
Sbjct: 403 LVTNGALDRESQAEYNITITVSDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IG+VSATD D +V Y L P ++LV I G+
Sbjct: 463 ----NNSPALH------IGTVSATDRDAGANAQVTYSLLPPRDPHLPLASLVSINADNGQ 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ-----L 221
L + ++ +E+ V A D SP+ ++ +V + N+P VL Q
Sbjct: 513 LFALRSLDYEALQAFEVRVGAADRGSPALSSQALVRVLVLDDNDNAPFVLYPLQNGSAPC 572
Query: 222 LQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDE 281
+++ R +EA + + K + + D + F L K TE F +
Sbjct: 573 TELVPRAAEAGYLVTK------------VVAVDGDSGQNAWLSFQLLKATEPGLFGV--- 617
Query: 282 NPWITVDENGDVRVKK 297
W NG+VR +
Sbjct: 618 --WA---HNGEVRTAR 628
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 19/92 (20%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDV-----KGINKAETHVTVDVLDENDNSPVFSQKVYR 116
LLV +DREE + L +TA D GI A+ H+ V LD NDN+P F+Q +Y
Sbjct: 193 LLVLDKALDREEQPELILTLTALDGGSPPRSGI--AQVHIVV--LDINDNAPEFTQSLYE 248
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
V + NS ++ S + +VSA+D D
Sbjct: 249 VQVLE-----NSPIN-----SVLVTVSASDLD 270
>gi|350581228|ref|XP_003480992.1| PREDICTED: protocadherin beta-11-like [Sus scrofa]
Length = 804
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 61/122 (50%), Gaps = 21/122 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
L T +DREE A+Y++ IT D+ + H +TV V D NDN+P FSQ Y V +
Sbjct: 403 LETEKPLDREERAEYNITITVGDLGTPRRHTQHNLTVRVADVNDNAPAFSQPAYTLRVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H IG+V ATDAD ++ Y L PS+ LV I P TG+
Sbjct: 463 ----NNSPALH------IGTVRATDADAGANAQLTYSLLPPSDPHLPLASLVAINPDTGQ 512
Query: 172 LL 173
L
Sbjct: 513 LF 514
>gi|441596426|ref|XP_004087312.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-5 [Nomascus
leucogenys]
Length = 795
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 73/148 (49%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT TD+ K E ++TV V D NDN+PVF+Q Y V +
Sbjct: 402 LVTQRTLDRESQAEYNITITVTDLGTPRLKTEYNITVLVSDVNDNAPVFTQTSYTLFVRE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L +P ++LV I G
Sbjct: 462 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLLPQDPHLPLASLVSINADNGH 511
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 512 LFALRSLDYEALQAFEFHVGATDRGSPA 539
>gi|4099553|gb|AAD00652.1| protocadherin 2C [Mus musculus]
Length = 928
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +DREEV Y++ +TATD +G ETH+ +D+ D NDNSPVF Q Y +
Sbjct: 400 LVTDAVLDREEVPSYNITMTATD-RGSPPLTTETHLALDIADTNDNSPVFLQASYWAYIP 458
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLA 157
+ + + +SI SV+A D D DK V Y LA
Sbjct: 459 E----------NNPRGASIASVTAHDPDSDKNAQVTYSLA 488
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 45 NPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDV 100
+P H E++N + LV +DREE A + LV+TA+D + + V V
Sbjct: 170 SPNAHFSLEVQNGADGNKYPELVLESSLDREEKAAHLLVLTASDAGDPVRTGTARIRVMV 229
Query: 101 LDENDNSPVFSQKVYR 116
+D NDN+P F++ YR
Sbjct: 230 VDANDNAPAFARSEYR 245
>gi|66346693|ref|NP_005236.2| protocadherin Fat 1 precursor [Homo sapiens]
gi|334302792|sp|Q14517.2|FAT1_HUMAN RecName: Full=Protocadherin Fat 1; AltName: Full=Cadherin family
member 7; AltName: Full=Cadherin-related tumor suppressor
homolog; AltName: Full=Protein fat homolog; Contains:
RecName: Full=Protocadherin Fat 1, nuclear form; Flags:
Precursor
Length = 4588
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 122/287 (42%), Gaps = 44/287 (15%)
Query: 23 HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVIT 82
H V Y I GN F + NP SG + +T +D E + Y+L+I
Sbjct: 1692 HSQSSVVYEIKDGNTGDAFDI-NP-----------HSGTI-ITQKALDFETLPIYTLIIQ 1738
Query: 83 ATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
T++ G++ T V V + DENDN+PVF Q Y ++ + +S+NS V + + +
Sbjct: 1739 GTNMAGLS-TNTTVLVHLQDENDNAPVFMQAEYTGLISE-SASINSVVLTDRNVPLV--I 1794
Query: 143 SATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQ 195
A DAD D + Y + PS I TG + +L+ D + + TV+ HD+
Sbjct: 1795 RAADADKDSNALLVYHIVEPSVHTYFAIDSSTGAIHTVLSLDYEETSI-FHFTVQVHDMG 1853
Query: 196 SPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKR------ 249
+P +A A V + +ID P + + PT +
Sbjct: 1854 TPRLFAEYAANV-------------TVHVIDINDCPPVFAKPLYEASLLLPTYKGVKVIT 1900
Query: 250 IDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
++ ++ D ++++++ + EKF + + +TV +R +
Sbjct: 1901 VNATDADSSAFSQLIYSITEGNIGEKFSMDYKTGALTVQNTTQLRSR 1947
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + HP VRY I G+ + F + + +R T+
Sbjct: 45 ENSAAKTYV-GHPVKMGVYITHPAWEVRYKIVSGDSENLFKAEEYILGDFCFLRIRTKGG 103
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A T V V VLD ND P+FS Y
Sbjct: 104 NTAIL------NREVKDHYTLIVKALEKNTNVEARTKVRVQVLDTNDLRPLFSPTSYSV- 156
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 157 ------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGVIVLT 207
Query: 176 G 176
G
Sbjct: 208 G 208
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 32/199 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + YSI GN++ F++ +SK+G + + +
Sbjct: 3246 GTEVLQVYAASRDIEANAEITYSIISGNEHGKFSI------------DSKTGAVFIIE-N 3292
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L + ATD ++ T V V+V D NDN+PVFSQ Y ++ + + L
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVAT-VNVNVTDINDNTPVFSQDTYTTVISE-DAVL 3350
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
S+ +V A DADG + Y + + I P GE+ +T +
Sbjct: 3351 E---------QSVITVMADDADGPSNSHIHYSIIDGNQGSSFTIDPVRGEVKVTKLLDRE 3401
Query: 182 DVE-YELTVEAHDLQSPSR 199
+ Y LTV+A D SP R
Sbjct: 3402 TISGYTLTVQASDNGSPPR 3420
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1174 LMYKITSGNPQGFFSI------------HPKTGLITTTSRKLDREQQDEHILEVTVTDNG 1221
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRF 117
K+ V V +LDENDN P F QK Y+
Sbjct: 1222 SPPKSTIARVIVKILDENDNKPQFLQKFYKI 1252
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN +F + +P E++ + +DRE ++ Y+L + A+D
Sbjct: 3370 IHYSIIDGNQGSSFTI-DPVRGEVK------------VTKLLDRETISGYTLTVQASDNG 3416
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+PVFS+ Y I+
Sbjct: 3417 SPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVII 3449
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 16/108 (14%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE+ Y L ITATD G ++ V V VLD NDNSPV + +Y ++
Sbjct: 2984 LDREKRDNYLLTITATD--GTFSSKAIVEVKVLDANDNSPVCEKTLY-------SDTIPE 3034
Query: 129 NVSHWKKFSSIGSVSATDAD---GDKVAYK-LAVPSNLVVIVPQTGEL 172
+V K I +SATDAD ++ Y L + + P TGEL
Sbjct: 3035 DVLPGKL---IMQISATDADIRSNAEITYTLLGSGAEKFKLNPDTGEL 3079
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 103/250 (41%), Gaps = 36/250 (14%)
Query: 50 EIRNSTESKSGV----------LLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVT 97
EIR S SGV ++ TS +DRE + Y L + ATD +G+ + +
Sbjct: 1068 EIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSHYWLTVFATD-QGVVPLSSFIEIY 1126
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAY 154
++V D NDN+P S+ VY + + + K S+ + A D D DK+ Y
Sbjct: 1127 IEVEDVNDNAPQTSEPVYYPEI----------MENSPKDVSVVQIEAFDPDSSSNDKLMY 1176
Query: 155 KLAV--PSNLVVIVPQTGELLLTG---DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL 209
K+ P I P+TG + T D D E+ L V D SP + A+V +
Sbjct: 1177 KITSGNPQGFFSIHPKTGLITTTSRKLDREQQD-EHILEVTVTDNGSPPK--STIARVIV 1233
Query: 210 QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVR-PTKRIDFSETDGEMEGRIVFALE 268
+ Q LQ K P R + R A R P + ++ D I +++E
Sbjct: 1234 KILDENDNKPQFLQKF-YKIRLPEREKPDRERNARREPLYHVIATDKDEGPNAEISYSIE 1292
Query: 269 KETEREKFKI 278
E KF I
Sbjct: 1293 DGNEHGKFFI 1302
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E+ Q+++ + A D G+ ++ VTVDV D NDN P+F Q++Y ++ +
Sbjct: 2348 LDYEQSRQHTIFVRAVD-GGMPTLSSDVIVTVDVTDLNDNPPLFEQQIY-------EARI 2399
Query: 127 NSNVSHWKKFSSIGSVSATDADGDKVAYKL 156
+ + H + + + A +D DK+ Y +
Sbjct: 2400 SEHAPHGHFVTCVKAYDADSSDIDKLQYSI 2429
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 15/127 (11%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+ R++ A + L +T +D KA T V V VL N N P F+Q Y K++ +
Sbjct: 426 VKRQQAAHFELEVTTSD----RKASTKVLVKVLGANSNPPEFTQTAY-------KAAFDE 474
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT 188
NV S+ +V + + V Y +A ++ VP + S++++YEL
Sbjct: 475 NVPIGTTVMSLSAVDPDEGENGYVTYSIANLNH----VPFAIDHFTGAVSTSENLDYELM 530
Query: 189 VEAHDLQ 195
+ L+
Sbjct: 531 PRVYTLR 537
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 54/125 (43%), Gaps = 27/125 (21%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET 94
G+ F L NP T E++ ST +DREE A Y L++ ATD G +
Sbjct: 3064 GSGAEKFKL-NPDTGELKTSTP------------LDREEQAVYHLLVRATDGGG-RFCQA 3109
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---K 151
+ + + D NDN+P FS Y V + + + + V ATDAD K
Sbjct: 3110 SIVLTLEDVNDNAPEFSADPYAITV----------FENTEPGTLLTRVQATDADAGLNRK 3159
Query: 152 VAYKL 156
+ Y L
Sbjct: 3160 ILYSL 3164
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 36/185 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ GN++ F + + ++G+L + S +DRE +Y+L IT D+
Sbjct: 754 YAVSGGNEDSCFMI------------DMETGMLKILS-PLDRETTDKYTLNITVYDLGIP 800
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
KA + V V+D NDN P F Q+ Y V + K + S I V ATD D
Sbjct: 801 QKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDK----------EVHSEIIQVEATDKD 850
Query: 149 ---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYE--LTVEAHDLQSPSRYARE 203
V Y + ++ I TG ++ P ++++E L +EA D ARE
Sbjct: 851 LGPNGHVTYSIVTDTDTFSIDSVTG-VVNIARPLDRELQHEHSLKIEARD------QARE 903
Query: 204 PAQVW 208
Q++
Sbjct: 904 EPQLF 908
>gi|9256602|ref|NP_061753.1| protocadherin beta-10 precursor [Homo sapiens]
gi|13431371|sp|Q9UN67.1|PCDBA_HUMAN RecName: Full=Protocadherin beta-10; Short=PCDH-beta-10; Flags:
Precursor
gi|5457027|gb|AAD43750.1|AF152489_1 protocadherin beta 10 [Homo sapiens]
gi|21619312|gb|AAH31837.1| Protocadherin beta 10 [Homo sapiens]
gi|37182561|gb|AAQ89082.1| PCDHB10 [Homo sapiens]
Length = 800
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 73/149 (48%), Gaps = 22/149 (14%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V
Sbjct: 402 ILITEGALDREIRAEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVR 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 462 E----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNG 511
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 512 HLFALRSLDYEALQAFEFRVGATDRGSPA 540
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
LV +DREE + SL +TA D +++ T V + VLD NDN+P F+Q +Y
Sbjct: 194 LVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALY 247
>gi|355709520|gb|AES03618.1| protocadherin beta 15 [Mustela putorius furo]
Length = 240
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 78/162 (48%), Gaps = 28/162 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G +DRE A+Y++ IT TD+ K + ++TV V D NDN+P FSQ Y V +
Sbjct: 75 LVTNGALDRESQAEYNITITVTDLGTPRLKTQHNLTVTVSDVNDNAPTFSQTTYTLRVRE 134
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P +LV I G+
Sbjct: 135 ----NNSPALH------IGSVSATDRDSGANAQVTYSLLPPHDPQLPLGSLVSINADNGQ 184
Query: 172 LLLTGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWL 209
L S D E +E V A D SP+ ++ +V +
Sbjct: 185 LFALR---SLDFEALQAFEFRVGAADRGSPALSSQALVRVLV 223
>gi|170032325|ref|XP_001844032.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872318|gb|EDS35701.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 644
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 105/243 (43%), Gaps = 42/243 (17%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE Y LV++ TD G+ ET +T+ V D NDN P F++ Y F + +
Sbjct: 80 LDRETEDTYRLVVSVTD--GVQSTETTITIQVTDTNDNPPTFAEPAYSFDIPE------- 130
Query: 129 NVSHWKKFSSIGSVSATDAD---GDKVAYKLAV--PSNLVVIVPQTGELLLTGDPPSDDV 183
+ + +G ++ATD D V Y + +++ + PQTG LT ++V
Sbjct: 131 ---NAARGFQVGVIAATDPDLGANADVTYTVISDWANDVFSLNPQTGIFTLTARLDYEEV 187
Query: 184 E-YELTVEAHDLQSPSRYAREPAQ---VWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRR 239
+ Y L V+A D PS + + L N+P+ D S + E
Sbjct: 188 QHYILVVQAQDNGHPSLSSTLTVYCNVIDLNDNAPIF---------DPMSYSNEIFENVP 238
Query: 240 VTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
++ V + ++TD + GRI +++ + E F+I NG +R ++
Sbjct: 239 ISTDV---VTVSATDTDSGINGRIEYSITSGDDNEDFQIL---------SNGTIRTRRAL 286
Query: 300 DFE 302
D E
Sbjct: 287 DRE 289
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 11/88 (12%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LL SG +DRE + Y L +TA D K+ ++ + + VLDENDNSP+F K Y +
Sbjct: 385 LLRVSGRLDRETKSSYELTVTAKDRGEPPKSSQSKIRIHVLDENDNSPIFDPKQYSAAIA 444
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ N+++ +S+ VSATD D
Sbjct: 445 E-----NASIG-----ASVLQVSATDID 462
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 113/285 (39%), Gaps = 53/285 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSIT G+DN F + + T R + +DRE + YSL+++A D
Sbjct: 259 IEYSITSGDDNEDFQILSNGTIRTRRA--------------LDRESKSSYSLIVSARDCA 304
Query: 88 GINKAE----THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
+ + VT+ + D ND +P F V ++S+ N+ +I +V
Sbjct: 305 KEPEKQLSSTVQVTIVLKDVNDLAPEF--------VTPNETSVAENIPINTVIMAIKAVD 356
Query: 144 ATDADGDKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD-DVEYELTVEAHDLQSPSRY 200
+ V Y+L AV + V G L ++G + YELTV A D P +
Sbjct: 357 RDEGRNGYVEYQLDPAVQTPFTV-GSADGLLRVSGRLDRETKSSYELTVTAKDRGEPPKS 415
Query: 201 AREPAQVWL---QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDG 257
++ ++ + NSP+ +Q I E + +V D E
Sbjct: 416 SQSKIRIHVLDENDNSPIFDPKQYSAAI---------AENASIGASVLQVSATDIDEG-- 464
Query: 258 EMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
GR+ F++ + F I +++G VRV K ++E
Sbjct: 465 -ANGRVRFSIAAGDDNRDFTIS--------EDSGVVRVAKNLNYE 500
>gi|195111232|ref|XP_002000183.1| GI22667 [Drosophila mojavensis]
gi|193916777|gb|EDW15644.1| GI22667 [Drosophila mojavensis]
Length = 1982
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 106/258 (41%), Gaps = 65/258 (25%)
Query: 3 NSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL 62
N SG VK I AS KH + Y + GN++ F + + SG +
Sbjct: 1447 NENSGRDVKIGHIQAASRSKHNRDIFYYMLL-GNEDGAFYV------------DKLSGDI 1493
Query: 63 LVTSGDIDREEVAQYSLVITAT---------------DVKGINKAET--HVTVDVLDEND 105
T+ +DREE Y+L I A+ +K +N+ T V + VLD ND
Sbjct: 1494 Y-TNKSLDREETDAYTLYILASIKADLHISEEERASFSIKTLNRDNTVAKVAITVLDVND 1552
Query: 106 NSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA-----------Y 154
N+PVF + VY + +N+N K S+I V+ATDAD K A Y
Sbjct: 1553 NAPVFEKPVYY-------AGVNANA---KMKSAITMVNATDADQGKNAKIEYMIVASNLY 1602
Query: 155 KLAVPSNLVVIVPQTGELLLTGDPPSDDV-------EYELTVEAHDLQSPSRYAREPAQV 207
K + IVP + G ++ + +EL + A +L+ P R A +
Sbjct: 1603 KFGATKSTGSIVPSPFAISQDGRITANTIMAEYNQDRFELEIVARELEQPQRSANTKVNI 1662
Query: 208 WLQFNSPVLQDEQLLQMI 225
W V QL+++I
Sbjct: 1663 W------VFDGTQLVRVI 1674
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 78/152 (51%), Gaps = 19/152 (12%)
Query: 54 STESKSGVLLVTSGDI-DREEVAQYSLVITATDVK--GINKAETH-VTVDVLDENDNSPV 109
S ++ +G ++V + I DRE++ + +L + A D + K+ T + +++LD NDN+PV
Sbjct: 1155 SVDAYTGNVMVANASILDREQLKELTLSVVAQDKAPATVQKSATATIHINILDVNDNAPV 1214
Query: 110 FSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVV- 164
F++ VY S+++ N + ++ +++ V A D D GD V Y + + L +
Sbjct: 1215 FTRSVY-------NSTVSENAA-YQPPAALLQVQAIDLDEGLYGD-VRYIITAGNELALF 1265
Query: 165 -IVPQTGELLLTGDPPSDDVEYELTVEAHDLQ 195
+ Q+G + YELT+ A D Q
Sbjct: 1266 KLDAQSGIIYPAQSLAGKHGVYELTISARDTQ 1297
>gi|241758144|ref|XP_002401744.1| conserved hypothetical protein [Ixodes scapularis]
gi|215508485|gb|EEC17939.1| conserved hypothetical protein [Ixodes scapularis]
Length = 2750
Score = 58.2 bits (139), Expect = 5e-06, Method: Composition-based stats.
Identities = 41/119 (34%), Positives = 59/119 (49%), Gaps = 12/119 (10%)
Query: 33 TQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD---VKGI 89
T N N +++ NP +SKSG++ T +DRE + Y+LV+ ATD V
Sbjct: 353 TGSNANVDYSILNPDGTNGAFGIDSKSGII-TTRSSLDRELTSFYALVVQATDSGPVTDR 411
Query: 90 NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
A V + VLDENDN P FS++ Y +K S + N W + + ATD+D
Sbjct: 412 KSASATVQITVLDENDNYPQFSERSY-----SVKVSEDVN---WLNHPEVARIRATDSD 462
Score = 47.0 bits (110), Expect = 0.013, Method: Composition-based stats.
Identities = 73/299 (24%), Positives = 123/299 (41%), Gaps = 52/299 (17%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
I S + + +RYS+ GN FA+ +S +G + V S +D E
Sbjct: 456 IRATDSDQGANAALRYSLIGGNTQGHFAM------------DSLTGSVTVLS-PLDYESA 502
Query: 75 AQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHW 133
Y LV+ D +++ T + V+VLD NDN P F ++ V + N V H
Sbjct: 503 RSYRLVVRVQDGGTPSRSNTTQLLVNVLDINDNDPKFYTSLFHETVPE-----NVPVGH- 556
Query: 134 KKFSSIGSVSATDAD---GDKVAYKLAV---PSNLVVIVPQTGELLLTGDPPSDD-VEYE 186
SI V A DAD +++Y L+ P + + TG + T ++ +
Sbjct: 557 ----SIVRVQAYDADDGANAEISYTLSSSERPDLPLNVDDVTGWVSTTRQLDREESASFN 612
Query: 187 LTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA 243
V A D +PSR A + +Q N PV + R + V+ A
Sbjct: 613 FQVVARDHGTPSRSATASILLRVQDVNDNDPVFEP---------------RTYEATVSEA 657
Query: 244 VRP-TKRIDFSETDGEMEGRIVFALEKETEREKFKIRDEN--PWITVDENGDVRVKKRW 299
P T + + +D + R+V+ + RE+F I N ++V + D ++++R+
Sbjct: 658 DPPGTPVVSVTASDRDEHSRLVYQIASGNTRERFGIVSHNRQAVVSVAQPLDYKLERRF 716
Score = 44.3 bits (103), Expect = 0.087, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 15/89 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA---ETHVTVDVLDENDNSPVFSQKVYRFIV 119
LVT+ +DRE V Y+LV+ A D G N T+V +++ D NDN+PVF Y V
Sbjct: 803 LVTARPLDRERVGGYTLVVAAQD--GGNPPLSDTTNVELEIADVNDNTPVFPTAGYTSTV 860
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + + ++V+H VSA DAD
Sbjct: 861 SE-DALVGTSVAH---------VSALDAD 879
>gi|1107687|emb|CAA60685.1| homologue of Drosophila Fat protein [Homo sapiens]
Length = 4590
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 122/287 (42%), Gaps = 44/287 (15%)
Query: 23 HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVIT 82
H V Y I GN F + NP SG + +T +D E + Y+L+I
Sbjct: 1695 HSQSSVVYEIKDGNTGDAFDI-NP-----------HSGTI-ITQKALDFETLPIYTLIIQ 1741
Query: 83 ATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
T++ G++ T V V + DENDN+PVF Q Y ++ + +S+NS V + + +
Sbjct: 1742 GTNMAGLS-TNTTVLVHLQDENDNAPVFMQAEYTGLISE-SASINSVVLTDRNVPLV--I 1797
Query: 143 SATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQ 195
A DAD D + Y + PS I TG + +L+ D + + TV+ HD+
Sbjct: 1798 RAADADKDSNALLVYHIVEPSVHTYFAIDSSTGAIHTVLSLDYEETSI-FHFTVQVHDMG 1856
Query: 196 SPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKR------ 249
+P +A A V + +ID P + + PT +
Sbjct: 1857 TPRLFAEYAANV-------------TVHVIDINDCPPVFAKPLYEASLLLPTYKGVKVIT 1903
Query: 250 IDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
++ ++ D ++++++ + EKF + + +TV +R +
Sbjct: 1904 VNATDADSSAFSQLIYSITEGNIGEKFSMDYKTGALTVQNTTQLRSR 1950
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + HP VRY I G+ + F + + +R T+
Sbjct: 45 ENSAAKTYV-GHPVKMGVYITHPAWEVRYKIVSGDSENLFKAEEYILGDFCFLRIRTKGG 103
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A T V V VLD ND P+FS Y
Sbjct: 104 NTAIL------NREVKDHYTLIVKALEKNTNVEARTKVRVQVLDTNDLRPLFSPTSYSV- 156
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 157 ------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGVIVLT 207
Query: 176 G 176
G
Sbjct: 208 G 208
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 32/199 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + YSI GN++ F++ +SK+G + + +
Sbjct: 3248 GTEVLQVYAASRDIEANAEITYSIISGNEHGKFSI------------DSKTGAVFIIE-N 3294
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L + ATD ++ T V V+V D NDN+PVFSQ Y ++ + + L
Sbjct: 3295 LDYESSHEYYLTVEATDGGTPSLSDVAT-VNVNVTDINDNTPVFSQDTYTTVISE-DAVL 3352
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
S+ +V A DADG + Y + + I P GE+ +T +
Sbjct: 3353 E---------QSVITVMADDADGPSNSHIHYSIIDGNQGSSFTIDPVRGEVKVTKLLDRE 3403
Query: 182 DVE-YELTVEAHDLQSPSR 199
+ Y LTV+A D SP R
Sbjct: 3404 TISGYTLTVQASDNGSPPR 3422
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1174 LMYKITSGNPQGFFSI------------HPKTGLITTTSRKLDREQQDEHILEVTVTDNG 1221
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRF 117
K+ V V +LDENDN P F QK Y+
Sbjct: 1222 SPPKSTIARVIVKILDENDNKPQFLQKFYKI 1252
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN +F + +P E++ + +DRE ++ Y+L + A+D
Sbjct: 3372 IHYSIIDGNQGSSFTI-DPVRGEVK------------VTKLLDRETISGYTLTVQASDNG 3418
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+PVFS+ Y I+
Sbjct: 3419 SPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVII 3451
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 104/250 (41%), Gaps = 36/250 (14%)
Query: 50 EIRNSTESKSGV----------LLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVT 97
EIR S SGV ++ TS +DRE + Y L + ATD +G+ + +
Sbjct: 1068 EIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSHYWLTVFATD-QGVVPLSSFIEIY 1126
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAY 154
++V D NDN+P S+ VY + + + K S+ + A D D DK+ Y
Sbjct: 1127 IEVEDVNDNAPQTSEPVYYPEI----------MENSPKDVSVVQIEAFDPDSSSNDKLMY 1176
Query: 155 KLAV--PSNLVVIVPQTGELLLTG---DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL 209
K+ P I P+TG + T D D E+ L V D SP + A+V +
Sbjct: 1177 KITSGNPQGFFSIHPKTGLITTTSRKLDREQQD-EHILEVTVTDNGSPPK--STIARVIV 1233
Query: 210 QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVR-PTKRIDFSETDGEMEGRIVFALE 268
+ Q LQ K P R + R A R P R+ ++ D I +++E
Sbjct: 1234 KILDENDNKPQFLQKF-YKIRLPEREKPDRERNARREPLYRVIATDKDEGPNAEISYSIE 1292
Query: 269 KETEREKFKI 278
E KF I
Sbjct: 1293 DGNEHGKFFI 1302
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 16/108 (14%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE+ Y L ITATD G ++ V V VLD NDNSPV + +Y ++
Sbjct: 2986 LDREKRDNYLLTITATD--GTFSSKAIVEVKVLDANDNSPVCEKTLY-------SDTIPE 3036
Query: 129 NVSHWKKFSSIGSVSATDAD---GDKVAYK-LAVPSNLVVIVPQTGEL 172
+V K I +SATDAD ++ Y L + + P TGEL
Sbjct: 3037 DVLPGKL---IMQISATDADIRSNAEITYTLLGSGAEKFKLNPDTGEL 3081
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 54/125 (43%), Gaps = 27/125 (21%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET 94
G+ F L NP T E++ ST +DREE A Y L++ ATD G +
Sbjct: 3066 GSGAEKFKL-NPDTGELKTSTP------------LDREEQAVYHLLVRATDGGG-RFCQA 3111
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---K 151
+ V + D NDN+P FS Y V + + + + V ATDAD K
Sbjct: 3112 SIVVTLEDVNDNAPEFSADPYAITV----------FENTEPGTLLTRVQATDADAGLNRK 3161
Query: 152 VAYKL 156
+ Y L
Sbjct: 3162 ILYSL 3166
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 15/127 (11%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+ R++ A + L +T +D KA T V V VL N N P F+Q Y K++ +
Sbjct: 426 VKRQQAAHFELEVTTSD----RKASTKVLVKVLGANSNPPEFTQTAY-------KAAFDE 474
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT 188
NV S+ +V + + V Y +A ++ VP + S++++YEL
Sbjct: 475 NVPIGTTIMSLSAVDPDEGENGYVTYSIANLNH----VPFAIDHFTGAVSTSENLDYELM 530
Query: 189 VEAHDLQ 195
+ L+
Sbjct: 531 PRVYTLR 537
>gi|119625020|gb|EAX04615.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_b [Homo
sapiens]
Length = 3841
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 90/195 (46%), Gaps = 25/195 (12%)
Query: 23 HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVIT 82
H V Y I GN F + NP SG + +T +D E + Y+L+I
Sbjct: 1695 HSQSSVVYEIKDGNTGDAFDI-NP-----------HSGTI-ITQKALDFETLPIYTLIIQ 1741
Query: 83 ATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
T++ G++ T V V + DENDN+PVF Q Y ++ + +S+NS V + + +
Sbjct: 1742 GTNMAGLS-TNTTVLVHLQDENDNAPVFMQAEYTGLISE-SASINSVVLTDRNVPLV--I 1797
Query: 143 SATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQ 195
A DAD D + Y + PS I TG + +L+ D + + TV+ HD+
Sbjct: 1798 RAADADKDSNALLVYHIVEPSVHTYFAIDSSTGAIHTVLSLDYEETSI-FHFTVQVHDMG 1856
Query: 196 SPSRYAREPAQVWLQ 210
+P +A A V +
Sbjct: 1857 TPRLFAEYAANVTVH 1871
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + HP VRY I G+ + F + + +R T+
Sbjct: 45 ENSAAKTYV-GHPVKMGVYITHPAWEVRYKIVSGDSENLFKAEEYILGDFCFLRIRTKGG 103
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A T V V VLD ND P+FS Y
Sbjct: 104 NTAIL------NREVKDHYTLIVKALEKNTNVEARTKVRVQVLDTNDLRPLFSPTSYSV- 156
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 157 ------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGVIVLT 207
Query: 176 G 176
G
Sbjct: 208 G 208
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 32/199 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + YSI GN++ F++ +SK+G + + +
Sbjct: 3249 GTEVLQVYAASRDIEANAEITYSIISGNEHGKFSI------------DSKTGAVFIIE-N 3295
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L + ATD ++ T V V+V D NDN+PVFSQ Y ++ + + L
Sbjct: 3296 LDYESSHEYYLTVEATDGGTPSLSDVAT-VNVNVTDINDNTPVFSQDTYTTVISE-DAVL 3353
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
S+ +V A DADG + Y + + I P GE+ +T +
Sbjct: 3354 E---------QSVITVMADDADGPSNSHIHYSIIDGNQGSSFTIDPVRGEVKVTKLLDRE 3404
Query: 182 DVE-YELTVEAHDLQSPSR 199
+ Y LTV+A D SP R
Sbjct: 3405 TISGYTLTVQASDNGSPPR 3423
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1174 LMYKITSGNPQGFFSI------------HPKTGLITTTSRKLDREQQDEHILEVTVTDNG 1221
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRF 117
K+ V V +LDENDN P F QK Y+
Sbjct: 1222 SPPKSTIARVIVKILDENDNKPQFLQKFYKI 1252
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN +F + +P E++ + +DRE ++ Y+L + A+D
Sbjct: 3373 IHYSIIDGNQGSSFTI-DPVRGEVK------------VTKLLDRETISGYTLTVQASDNG 3419
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+PVFS+ Y I+
Sbjct: 3420 SPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVII 3452
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 16/108 (14%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE+ Y L ITATD G ++ V V VLD NDNSPV + +Y ++
Sbjct: 2987 LDREKRDNYLLTITATD--GTFSSKAIVEVKVLDANDNSPVCEKTLY-------SDTIPE 3037
Query: 129 NVSHWKKFSSIGSVSATDAD---GDKVAYK-LAVPSNLVVIVPQTGEL 172
+V K I +SATDAD ++ Y L + + P TGEL
Sbjct: 3038 DVLPGKL---IMQISATDADIRSNAEITYTLLGSGAEKFKLNPDTGEL 3082
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E+ Q+++ + A D G+ ++ VTVDV D NDN P+F Q++Y ++ +
Sbjct: 2351 LDYEQSRQHTIFVRAVD-GGMPTLSSDVIVTVDVTDLNDNPPLFEQQIY-------EARI 2402
Query: 127 NSNVSHWKKFSSIGSVSATDADGDKVAYKL 156
+ + H + + + A +D DK+ Y +
Sbjct: 2403 SEHAPHGHFVTCVKAYDADSSDIDKLQYSI 2432
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 103/250 (41%), Gaps = 36/250 (14%)
Query: 50 EIRNSTESKSGV----------LLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVT 97
EIR S SGV ++ TS +DRE + Y L + ATD +G+ + +
Sbjct: 1068 EIRYSIRDGSGVGVFKIGEETGVIETSDRLDRESTSHYWLTVFATD-QGVVPLSSFIEIY 1126
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAY 154
++V D NDN+P S+ VY + + + K S+ + A D D DK+ Y
Sbjct: 1127 IEVEDVNDNAPQTSEPVYYPEI----------MENSPKDVSVVQIEAFDPDSSSNDKLMY 1176
Query: 155 KLAV--PSNLVVIVPQTGELLLTG---DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL 209
K+ P I P+TG + T D D E+ L V D SP + A+V +
Sbjct: 1177 KITSGNPQGFFSIHPKTGLITTTSRKLDREQQD-EHILEVTVTDNGSPPK--STIARVIV 1233
Query: 210 QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVR-PTKRIDFSETDGEMEGRIVFALE 268
+ Q LQ K P R + R A R P + ++ D I +++E
Sbjct: 1234 KILDENDNKPQFLQKF-YKIRLPEREKPDRERNARREPLYHVIATDKDEGPNAEISYSIE 1292
Query: 269 KETEREKFKI 278
E KF I
Sbjct: 1293 DGNEHGKFFI 1302
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 15/127 (11%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+ R++ A + L +T +D KA T V V VL N N P F+Q Y K++ +
Sbjct: 426 VKRQQAAHFELEVTTSD----RKASTKVLVKVLGANSNPPEFTQTAY-------KAAFDE 474
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT 188
NV S+ +V + + V Y +A ++ VP + S++++YEL
Sbjct: 475 NVPIGTTVMSLSAVDPDEGENGYVTYSIANLNH----VPFAIDHFTGAVSTSENLDYELM 530
Query: 189 VEAHDLQ 195
+ L+
Sbjct: 531 PRVYTLR 537
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 54/125 (43%), Gaps = 27/125 (21%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET 94
G+ F L NP T E++ ST +DREE A Y L++ ATD G +
Sbjct: 3067 GSGAEKFKL-NPDTGELKTSTP------------LDREEQAVYHLLVRATDGGG-RFCQA 3112
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---K 151
+ + + D NDN+P FS Y V + + + + V ATDAD K
Sbjct: 3113 SIVLTLEDVNDNAPEFSADPYAITV----------FENTEPGTLLTRVQATDADAGLNRK 3162
Query: 152 VAYKL 156
+ Y L
Sbjct: 3163 ILYSL 3167
>gi|119582377|gb|EAW61973.1| hCG1982206 [Homo sapiens]
Length = 798
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 73/149 (48%), Gaps = 22/149 (14%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V
Sbjct: 402 ILITEGALDREIRAEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVR 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 462 E----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNG 511
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 512 HLFALRSLDYEALQAFEFRVGATDRGSPA 540
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
LV +DREE + SL +TA D +++ T V + VLD NDN+P F+Q +Y
Sbjct: 194 LVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALY 247
>gi|334311073|ref|XP_001377490.2| PREDICTED: protocadherin beta-2-like [Monodelphis domestica]
Length = 817
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 75/160 (46%), Gaps = 22/160 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE +Y++ IT D+ K E ++T+ + D NDN PVF+Q Y+ + +
Sbjct: 432 LVTKGALDRESRNEYNITITIADLGFPRLKTEHNITIHISDINDNPPVFTQTTYKLYLQE 491
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H IGSVSA D D KV Y L P N + I G
Sbjct: 492 ----NNSPALH------IGSVSAKDRDSGINAKVTYSLLPPENGDLPLFSYISINSDNGH 541
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ 210
L + ++ ++ TV A D SPS ++ QV +Q
Sbjct: 542 LYALRSLDYETIQVFQFTVTATDGGSPSLSSQALVQVVVQ 581
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 4/85 (4%)
Query: 35 GNDNHTFALKNPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK 91
GN++ +P +H +IR E + LV +DREE ++ L +TA D K
Sbjct: 192 GNNSLQNYTISPNSHFNIQIRGDAEGRKYPELVLDKVLDREEQHEFRLTLTAVDGGVPPK 251
Query: 92 AET-HVTVDVLDENDNSPVFSQKVY 115
+ T + V V+D NDN+PVFSQ Y
Sbjct: 252 SGTAQILVLVMDSNDNAPVFSQSRY 276
>gi|327292140|ref|XP_003230778.1| PREDICTED: protocadherin gamma-B2-like, partial [Anolis
carolinensis]
Length = 692
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 93/198 (46%), Gaps = 34/198 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIVG 120
L+T G +DRE+ ++Y++ ITATD KG TH +TV + D NDNSP F + Y V
Sbjct: 406 LLTDGPLDREKNSEYNITITATD-KGTPSLSTHKSITVHISDINDNSPTFEESTYHVFVS 464
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA------VP-SNLVVIVPQTG 170
+ S +SI ++ A+D D D ++ Y + +P S+ V I +TG
Sbjct: 465 ENNPS----------GASIYTIKASDPDLDRNARITYSILNSNIDELPLSSFVSINSETG 514
Query: 171 ELLLTGDPPSDDV-EYELTVEAHDLQSPSRYAREPAQVWL---QFNSPVL-------QDE 219
+ + E+ + V+A D SPS + QV++ NSP +
Sbjct: 515 TIYAQRSFDYEQFREFHIQVKAQDGGSPSLSSSVTVQVFILDQNDNSPRILYPLLDTDGS 574
Query: 220 QLLQMIDRKSEAPHRIEK 237
L +M+ R SE + + K
Sbjct: 575 ALFEMVPRSSELGYLVTK 592
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 19/106 (17%)
Query: 48 THEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDN 106
T +++ S + +L+ +DRE L++TA D K T + +++ D NDN
Sbjct: 181 TLDVKESPDGNKYPVLIQRKSLDRESEHSLHLILTALDGGEPFKTGTAQIWINITDANDN 240
Query: 107 SPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS----VSATDAD 148
P+F+Q+ YR S K+ + IGS V+ATDAD
Sbjct: 241 PPIFTQETYR--------------SSLKETTPIGSLVTQVTATDAD 272
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 22/156 (14%)
Query: 51 IRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVF 110
++ S + +SG++ + +D EE Y +++ A D G+ A V VDV+DENDN P
Sbjct: 292 LKFSLDPESGIISIRE-PLDFEESTSYMMLVEAKDGGGL-LAHCKVEVDVIDENDNDPEI 349
Query: 111 S-QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL---VVI 165
S V+ I D SL V I +S D D G+ ++ SNL ++
Sbjct: 350 SLTSVFSPIPED---SLPGTV--------IALISVADRDEGESGKTACSIQSNLPFKILS 398
Query: 166 VPQTGELLLTGDPPSD---DVEYELTVEAHDLQSPS 198
T LLT D P D + EY +T+ A D +PS
Sbjct: 399 SSSTYYKLLT-DGPLDREKNSEYNITITATDKGTPS 433
>gi|193786411|dbj|BAG51694.1| unnamed protein product [Homo sapiens]
Length = 800
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 73/149 (48%), Gaps = 22/149 (14%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V
Sbjct: 402 ILITEGALDREIRAEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVR 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 462 E----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNG 511
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 512 HLFALRSLDYEALQAFEFRVGATDRGSPA 540
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
LV +DREE + SL + A D +++ T V + VLD NDN+P F+Q +Y
Sbjct: 194 LVLDKALDREEQGELSLTLRALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALY 247
>gi|344265058|ref|XP_003404604.1| PREDICTED: protocadherin beta-6 isoform 2 [Loxodonta africana]
Length = 796
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 89/197 (45%), Gaps = 41/197 (20%)
Query: 17 VASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQ 76
V+ + P+Q V SI +DN F L+ P+ LVT G++DRE A+
Sbjct: 370 VSDADSGPNQQVICSI---DDNLPFLLR-PSIENFYT---------LVTEGELDRESRAE 416
Query: 77 YSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK 135
Y++ IT D+ K E +TV V D NDN+P FSQ Y + + NS H
Sbjct: 417 YNITITVIDLGTPRLKTEHKITVLVSDVNDNAPTFSQTSYTLFIRE----NNSPALH--- 469
Query: 136 FSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDVE- 184
+GSVSATD D +V Y L P ++LV I G L + S D E
Sbjct: 470 ---MGSVSATDRDSGSNAQVTYSLLPPQDPHLPLASLVSINADNGHLFVLR---SLDYEA 523
Query: 185 ---YELTVEAHDLQSPS 198
+E V A D SP+
Sbjct: 524 LRAFEFRVGAIDAGSPA 540
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 15/117 (12%)
Query: 45 NPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLD 102
NP H + RN ++ + LV +DREE Q L TA D ++ T + + VLD
Sbjct: 176 NPHFHVLTRNRSDGRKIPELVLDKALDREEQPQLRLTFTALDGGSPPRSGTAEIQILVLD 235
Query: 103 ENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
NDN+PVF+Q++Y +++ S N+ + S + +VSATD D +V+Y L
Sbjct: 236 INDNAPVFAQELY-----EVQVSENNPLG-----SLVVTVSATDLDAGSFGEVSYAL 282
>gi|344265056|ref|XP_003404603.1| PREDICTED: protocadherin beta-6 isoform 1 [Loxodonta africana]
Length = 794
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 89/197 (45%), Gaps = 41/197 (20%)
Query: 17 VASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQ 76
V+ + P+Q V SI +DN F L+ P+ LVT G++DRE A+
Sbjct: 368 VSDADSGPNQQVICSI---DDNLPFLLR-PSIENFYT---------LVTEGELDRESRAE 414
Query: 77 YSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK 135
Y++ IT D+ K E +TV V D NDN+P FSQ Y + + NS H
Sbjct: 415 YNITITVIDLGTPRLKTEHKITVLVSDVNDNAPTFSQTSYTLFIRE----NNSPALH--- 467
Query: 136 FSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDVE- 184
+GSVSATD D +V Y L P ++LV I G L + S D E
Sbjct: 468 ---MGSVSATDRDSGSNAQVTYSLLPPQDPHLPLASLVSINADNGHLFVLR---SLDYEA 521
Query: 185 ---YELTVEAHDLQSPS 198
+E V A D SP+
Sbjct: 522 LRAFEFRVGAIDAGSPA 538
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 15/117 (12%)
Query: 45 NPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLD 102
NP H + RN ++ + LV +DREE Q L TA D ++ T + + VLD
Sbjct: 174 NPHFHVLTRNRSDGRKIPELVLDKALDREEQPQLRLTFTALDGGSPPRSGTAEIQILVLD 233
Query: 103 ENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
NDN+PVF+Q++Y +++ S N+ + S + +VSATD D +V+Y L
Sbjct: 234 INDNAPVFAQELY-----EVQVSENNPLG-----SLVVTVSATDLDAGSFGEVSYAL 280
>gi|14009461|gb|AAK51616.1|AF217748_1 protocadherin-beta10 [Homo sapiens]
Length = 800
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 73/149 (48%), Gaps = 22/149 (14%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V
Sbjct: 402 ILITEGALDREIRAEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVR 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 462 E----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNG 511
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 512 HLFALRSLDYEALQAFEFRVGATDRGSPA 540
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
LV +DREE + SL +TA D +++ T V + VLD NDN+P F+Q +Y
Sbjct: 194 LVLDKALDREEQGELSLTLTALDGGSPSRSGTSTVRIVVLDVNDNAPQFAQALY 247
>gi|343958032|dbj|BAK62871.1| protocadherin beta 6 precursor [Pan troglodytes]
Length = 448
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ K + +TV V D NDN+P F+Q Y V +
Sbjct: 55 LVTEGALDRESRAEYNITITVTDLGTPRLKTQQSITVQVSDVNDNAPAFTQTSYTLFVRE 114
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 115 ----NNSPALH------IGSVSATDRDSGINAQVTYSLLPPQDPHLPLASLVSINADNGH 164
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 165 LFALRSLDYEALQAFEFRVGATDRGSPA 192
>gi|119625021|gb|EAX04616.1| FAT tumor suppressor homolog 1 (Drosophila), isoform CRA_c [Homo
sapiens]
Length = 2228
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 121/285 (42%), Gaps = 44/285 (15%)
Query: 23 HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVIT 82
H V Y I GN F + NP SG + +T +D E + Y+L+I
Sbjct: 82 HSQSSVVYEIKDGNTGDAFDI-NP-----------HSGTI-ITQKALDFETLPIYTLIIQ 128
Query: 83 ATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
T++ G++ T V V + DENDN+PVF Q Y ++ + +S+NS V + + +
Sbjct: 129 GTNMAGLS-TNTTVLVHLQDENDNAPVFMQAEYTGLISE-SASINSVVLTDRNVPLV--I 184
Query: 143 SATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQ 195
A DAD D + Y + PS I TG + +L+ D + + TV+ HD+
Sbjct: 185 RAADADKDSNALLVYHIVEPSVHTYFAIDSSTGAIHTVLSLDYEETSI-FHFTVQVHDMG 243
Query: 196 SPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKR------ 249
+P +A A V + +ID P + + PT +
Sbjct: 244 TPRLFAEYAANVT-------------VHVIDINDCPPVFAKPLYEASLLLPTYKGVKVIT 290
Query: 250 IDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVR 294
++ ++ D ++++++ + EKF + + +TV +R
Sbjct: 291 VNATDADSSAFSQLIYSITEGNIGEKFSMDYKTGALTVQNTTQLR 335
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 32/199 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + YSI GN++ F++ +SK+G + + +
Sbjct: 1636 GTEVLQVYAASRDIEANAEITYSIISGNEHGKFSI------------DSKTGAVFIIE-N 1682
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L + ATD ++ T V V+V D NDN+PVFSQ Y ++ + + L
Sbjct: 1683 LDYESSHEYYLTVEATDGGTPSLSDVAT-VNVNVTDINDNTPVFSQDTYTTVISE-DAVL 1740
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
S+ +V A DADG + Y + + I P GE+ +T +
Sbjct: 1741 E---------QSVITVMADDADGPSNSHIHYSIIDGNQGSSFTIDPVRGEVKVTKLLDRE 1791
Query: 182 DVE-YELTVEAHDLQSPSR 199
+ Y LTV+A D SP R
Sbjct: 1792 TISGYTLTVQASDNGSPPR 1810
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN +F + +P E++ + +DRE ++ Y+L + A+D
Sbjct: 1760 IHYSIIDGNQGSSFTI-DPVRGEVK------------VTKLLDRETISGYTLTVQASDNG 1806
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+PVFS+ Y I+
Sbjct: 1807 SPPRVNTTTVNIDVSDVNDNAPVFSRGNYSVII 1839
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 16/108 (14%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE+ Y L ITATD G ++ V V VLD NDNSPV + +Y ++
Sbjct: 1374 LDREKRDNYLLTITATD--GTFSSKAIVEVKVLDANDNSPVCEKTLY-------SDTIPE 1424
Query: 129 NVSHWKKFSSIGSVSATDAD---GDKVAYK-LAVPSNLVVIVPQTGEL 172
+V K I +SATDAD ++ Y L + + P TGEL
Sbjct: 1425 DVLPGKL---IMQISATDADIRSNAEITYTLLGSGAEKFKLNPDTGEL 1469
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E+ Q+++ + A D G+ ++ VTVDV D NDN P+F Q++Y ++ +
Sbjct: 738 LDYEQSRQHTIFVRAVD-GGMPTLSSDVIVTVDVTDLNDNPPLFEQQIY-------EARI 789
Query: 127 NSNVSHWKKFSSIGSVSATDADGDKVAYKL 156
+ + H + + + A +D DK+ Y +
Sbjct: 790 SEHAPHGHFVTCVKAYDADSSDIDKLQYSI 819
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 54/125 (43%), Gaps = 27/125 (21%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET 94
G+ F L NP T E++ ST +DREE A Y L++ ATD G +
Sbjct: 1454 GSGAEKFKL-NPDTGELKTSTP------------LDREEQAVYHLLVRATDGGG-RFCQA 1499
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---K 151
+ + + D NDN+P FS Y V + + + + V ATDAD K
Sbjct: 1500 SIVLTLEDVNDNAPEFSADPYAITV----------FENTEPGTLLTRVQATDADAGLNRK 1549
Query: 152 VAYKL 156
+ Y L
Sbjct: 1550 ILYSL 1554
>gi|426229725|ref|XP_004008937.1| PREDICTED: protocadherin beta-6 [Ovis aries]
Length = 797
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DREE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTEGALDREERAEYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLWVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYK-------LAVPSNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L ++LV I P G
Sbjct: 463 ----NNSPALH------IGSVSATDTDAGANAQVTYSLLPPPDPLLPLASLVSINPDNGH 512
Query: 172 LL-LTGDPPSDDVEYELTVEAHDLQSPS 198
L LT +E V A D SP+
Sbjct: 513 LFALTSLDYEALRAFEFRVGATDRGSPA 540
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 15/117 (12%)
Query: 45 NPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLD 102
NP H + RN + + LV +DREE + L +TA D ++ T + + VLD
Sbjct: 176 NPHFHVLTRNRKDGRKSPELVLDKALDREEHPELRLTLTALDGGSPPRSGTTEIQILVLD 235
Query: 103 ENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
NDN+P F+Q+ Y + + SSL S V +VSA D D +V+Y L
Sbjct: 236 SNDNAPEFAQEFYEAEIPE-NSSLGSLVI---------TVSARDLDAGSFGEVSYAL 282
>gi|410989769|ref|XP_004001131.1| PREDICTED: protocadherin beta-8 [Felis catus]
Length = 798
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 93/199 (46%), Gaps = 37/199 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT TD+ K + ++TV V D NDN+P FSQ Y V +
Sbjct: 403 LVTERPLDRESQAEYNITITVTDLGTPRLKTQLNITVKVSDVNDNAPAFSQTTYTLRVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H IGSVSATD D +V Y L P++ LV I G+
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGANAQVTYSLLPPADPQLPLASLVSINADNGQ 512
Query: 172 LLLTGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ--- 220
L S D E +E V A D SP+ ++ +V + N+P VL Q
Sbjct: 513 LFALR---SLDYEALRAFEFGVRAADRGSPALSSQARVRVLVLDDNDNAPFVLYPPQNGS 569
Query: 221 --LLQMIDRKSEAPHRIEK 237
+++ R +EA + + K
Sbjct: 570 APCTELVPRAAEAGYLVTK 588
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE+ + L +TA D ++ + ++V+D NDN+P F Q +YR
Sbjct: 194 LVLDKALDREQEPELRLTLTAQDGGSPPRSGIAQINIEVVDINDNAPEFEQSLYR----- 248
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVV----IVPQTGELLL 174
+K +S + I +VSATDAD +++Y L S + I TGE+ L
Sbjct: 249 VKIPEDSPIGFL-----IVTVSATDADIGVNGEISYSLFQASEEICKTFEINSMTGEIRL 303
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+ ++ YE+ +EA D
Sbjct: 304 KKQLDFERIQFYEVNIEARD 323
>gi|291384509|ref|XP_002708817.1| PREDICTED: dachsous 1 [Oryctolagus cuniculus]
Length = 3295
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 72/153 (47%), Gaps = 23/153 (15%)
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
G +D E+ Y L + A D G ++ ++TV V D NDN+P FSQ +Y+ +
Sbjct: 2332 GPLDFEQRDSYHLQLLAHD--GPHEGHANLTVLVEDVNDNTPAFSQSLYQVTL------- 2382
Query: 127 NSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDV 183
+ H S+I SVSATD D ++Y LA P+ + P G L T + +
Sbjct: 2383 ---LEHTPPGSAILSVSATDRDSGANGLISYHLASPAEGFSVDPNNGTLFTTVG--AVAL 2437
Query: 184 EYE------LTVEAHDLQSPSRYAREPAQVWLQ 210
YE + +EA D +P R AR V LQ
Sbjct: 2438 GYEGPGVVDVVLEARDHGAPGRAARATVHVQLQ 2470
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVIT 82
H V YSI GN F L+ P E S VL LV +D E + QY+L +
Sbjct: 2512 HAAVDYSIISGNRGQVFQLE-PRLAEAGEGVGPGSRVLGCLVLLEPLDFESLTQYNLTVA 2570
Query: 83 ATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
A D + + VTV +LD NDN PVF+Q YR V
Sbjct: 2571 AADRGQPPRSSAVPVTVTILDVNDNPPVFTQASYRVAV 2608
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 86/204 (42%), Gaps = 20/204 (9%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQ-GNDNHTFALKNPTTHEIRNSTESKSG 60
EN GT V IL P+ + YS+ Q D+ F ++ P T E+
Sbjct: 1113 ENQPPGTSVGR--ILATDRDLGPNGRLTYSLRQLSEDSKAFRIQ-PQTGEV--------- 1160
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
T +DRE+ + Y L++ D ++ T V + VLD NDNSP F Q
Sbjct: 1161 ---TTLQTLDREQQSSYQLLVQVQDGGSPPRSTTGTVHIAVLDLNDNSPTFLQ-ASGAAG 1216
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGELLLTGDP 178
G L + V +++ + + + + Y L P S L + P +GELL
Sbjct: 1217 GGLPIQIPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGELLTAASL 1276
Query: 179 -PSDDVEYELTVEAHDLQSPSRYA 201
++ Y LT+ AHD SP R A
Sbjct: 1277 IRAERPHYVLTLSAHDQGSPPRSA 1300
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 25/131 (19%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LVR++++ G+ F L + SG L + +D E A++ LV+ A
Sbjct: 2630 PHGLVRFTLSSGDPMGLFEL------------DESSGTLRLAH-PLDCETQARHQLVVQA 2676
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
TD G + A VTV+V D ND+ P F + L +SL N +++ ++
Sbjct: 2677 TDPAGAHFALAPVTVEVQDVNDHGPAFPLNL-------LSTSLAENQPAGTLVTTLHAI- 2728
Query: 144 ATDADGDKVAY 154
DGD A+
Sbjct: 2729 ----DGDAGAF 2735
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 102/270 (37%), Gaps = 47/270 (17%)
Query: 43 LKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDV 100
L P++ E+R T +DRE+ Y+ +TA D T VT+ V
Sbjct: 1900 LLEPSSGELRTVTT------------LDREQCPSYAFSVTAVDGAAAGPLSTTVPVTITV 1947
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA 157
D ND++P F R + SL++ ++ ++ A D D + Y+LA
Sbjct: 1948 RDVNDHAPTFPTSPLRLRLPRPGPSLSTPT------LALATLRAEDRDAGANASILYRLA 2001
Query: 158 -VPSNLVVIVPQTGELLLTGDP----PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFN 212
P + TGE+ + P P D V L + A DL P+R A V LQ
Sbjct: 2002 GTPPPGTTVDSYTGEIRVARSPVALGPRDRV---LFIVATDLGRPARSATGVVIVGLQGE 2058
Query: 213 SPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETE 272
S E+ + SEA R T P + G G I +++ E
Sbjct: 2059 S-----ERGPRFPRTSSEATLRENAPPGTPVASPK-----AVHAGGSNGPITYSILSGNE 2108
Query: 273 REKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ F I+ IT VR + DFE
Sbjct: 2109 KGTFSIQPSTGAIT------VRSAEGLDFE 2132
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 403 EGGEGH-FAL----------STQDSVIYLVCVARRLDREERDAYNLRVTATDSGSPPLRA 451
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + V D NDN+PVF ++YR
Sbjct: 452 EAAFVLHVTDVNDNAPVFDHQLYR 475
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 10/119 (8%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ TF L E R + LV +G++DRE + Y L + A D
Sbjct: 177 YALSGDGAGETFRL------ETRPGPDGAPVPELVITGELDRENHSHYMLQLEAYDGGSP 230
Query: 90 -NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+A+ + V +LD ND++P F+Q Y +V + SL + F+S A A
Sbjct: 231 PRRAQALLDVTLLDINDHAPAFNQSRYHAVVSE---SLAPGSPVLQVFASDADAGANGA 286
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 74/157 (47%), Gaps = 23/157 (14%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFS 111
S + +GVL T +DREE + SL + A D+ G THVTV V DEND++P F
Sbjct: 1692 SLDPDTGVL-TTLRALDREEQEEISLTVYARDM-GSPPLLTHVTVRVTVEDENDHAPTFG 1749
Query: 112 QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL--AVPSNLVVIV 166
S L+ V + ++ + A+D D ++ Y++ P+ V+
Sbjct: 1750 -----------NSHLSLEVPEGQDPQTLTVLRASDPDVGANGQLQYRILDGDPAGAFVLD 1798
Query: 167 PQTGELLLTGDPPSDDVE--YELTVEAHDLQSPSRYA 201
P +GE T P +VE ++L +EA D P+ A
Sbjct: 1799 PASGE-FGTMRPLDREVEPAFQLRIEARDGGQPALSA 1834
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 78/175 (44%), Gaps = 30/175 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y + G D+H F L +P T G L V +DRE+ A++ L + A+D
Sbjct: 1577 VSYRLAAGGDSH-FRL-HPNT-----------GALSVVR-PLDREQRAEHVLTVVASDHG 1622
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
++ T + T+ V D ND +P F Q+ Y ++ + NS +S+ ++ ATD
Sbjct: 1623 SPPRSATQLLTISVADVNDEAPAFPQQEYTVLLRE-----NS-----PPGTSLLTLRATD 1672
Query: 147 AD---GDKVAYKLAVPSNLVVIVPQTGEL-LLTGDPPSDDVEYELTVEAHDLQSP 197
D +V Y V + P TG L L + E LTV A D+ SP
Sbjct: 1673 PDLGANGQVTYG-GVSCESFSLDPDTGVLTTLRALDREEQEEISLTVYARDMGSP 1726
>gi|66773362|ref|NP_001019272.1| protocadherin 1 alpha 6 precursor [Danio rerio]
gi|50881594|gb|AAT85376.1| protocadherin cluster 1 alpha 6 [Danio rerio]
Length = 939
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 12/142 (8%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV + +DRE+ A L++T D K T H+ ++V+D NDN+PVF Q +Y
Sbjct: 187 LVLNKVLDREKQAIIKLLLTGVDGGKPPKTGTLHIIINVMDVNDNNPVFIQPLY------ 240
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLA---VPSNLVVIVPQTGELLLTGDP 178
K L NV K SS+ + + ++ Y A ++L I+P+TG++++ G+
Sbjct: 241 -KVKLKENVPAGTKVSSVVATDLDEGVNREILYSFAGHGKKTDLFYIIPETGDIVVKGEI 299
Query: 179 P-SDDVEYELTVEAHDLQSPSR 199
++ EL V+A D SP R
Sbjct: 300 DYEENAAIELRVQAKDKGSPPR 321
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKV 114
LV G +DRE V+QY++ ITA D +G + T +TV + D NDN+P F V
Sbjct: 398 LVVDGPLDRESVSQYNITITAAD-EGTPPLSSSTVITVHISDVNDNAPHFPAPV 450
>gi|348583041|ref|XP_003477283.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-15-like [Cavia
porcellus]
Length = 794
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 51/88 (57%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVG 120
LVT G +DRE AQY++ IT TD+ G + +T T+ VL D NDN+P F+Q Y V
Sbjct: 400 LVTEGALDRETTAQYNITITVTDL-GTPRLKTQHTITVLVSDVNDNAPTFTQSSYTLSVP 458
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ NS H IGSVSATD+D
Sbjct: 459 E----NNSPALH------IGSVSATDSD 476
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 51 IRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPV 109
IRN + + LV ++DREE +++ L +TA D ++ T + V V+D NDN+P
Sbjct: 180 IRNQGDDRKHPELVLDKELDREEQSEFRLTLTALDGGSPPRSGTAKIRVLVMDVNDNAPA 239
Query: 110 FSQKVY 115
F+Q +Y
Sbjct: 240 FAQTLY 245
>gi|344277382|ref|XP_003410481.1| PREDICTED: protocadherin Fat 4 [Loxodonta africana]
Length = 4980
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 92/193 (47%), Gaps = 35/193 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+RY I+ GN+ FA+ S +GVL++ +D E+ ++ + I+ATD
Sbjct: 3123 LIRYGISSGNEGGVFAIN------------SSTGVLILAKA-LDYEQCQKHEMTISATDG 3169
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + VTV+V+D NDNSPVF+ Y V + + +++ ++AT
Sbjct: 3170 GWVARTGYCTVTVNVIDVNDNSPVFTPDEYFPTV----------LENAPSGTTVIHLNAT 3219
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
DAD +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 3220 DADSGTNAVIAYTVQSSDSDLFVIDPNTGIITTQG---FLDFETKQSYHLTVKAFNVPDE 3276
Query: 198 SRYAREPAQVWLQ 210
R + + L+
Sbjct: 3277 ERCSFATVNIQLK 3289
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 86/185 (46%), Gaps = 40/185 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+ YS+ +GN+ FA+ +S SG V L+ G +D E YSLVI A D
Sbjct: 1244 LIHYSVIKGNEERQFAI------------DSTSGQVTLI--GKLDYEATPAYSLVIQAVD 1289
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
++ T + +D+LDENDN+P F KS+L +V + + SV+
Sbjct: 1290 SGTVSLNSTCTLNIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVT 1338
Query: 144 ATDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
ATD+D GD + Y ++ +N I P TG + L D E Y+L + A D
Sbjct: 1339 ATDSDSGDNADLHYSISGTNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQ 1395
Query: 195 QSPSR 199
P R
Sbjct: 1396 GRPPR 1400
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 60/124 (48%), Gaps = 28/124 (22%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ V+YSI+ G+ + R ++SGV+ T +DREE Y L I A
Sbjct: 720 PNGTVKYSISAGDRS-------------RFQVNAQSGVI-STRMALDREEKTAYQLQIVA 765
Query: 84 TDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFI----------VGDLKSS---LNSN 129
TD + + VT+ VLD DN PVFSQ Y F+ VG + +S LNSN
Sbjct: 766 TDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFENVALGYHVGSVSASTMDLNSN 825
Query: 130 VSHW 133
+S+
Sbjct: 826 ISYL 829
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 39/53 (73%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYR 116
+G++DRE+V+ Y+L++ ATD KG + T V V VLD NDN+P+F+Q +Y+
Sbjct: 2109 TGELDREDVSNYTLMVVATD-KGQPSLSSSTEVVVMVLDINDNNPIFAQALYK 2160
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 71/174 (40%), Gaps = 29/174 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ T L T+ +DREE + Y L + A+
Sbjct: 826 ISYLITTGDQKGMFAINQVTGQ-------------LTTASVVDREEQSFYQLKVVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V D NDNSP F Q V S+N V +W+ SI A D
Sbjct: 871 GTVTGDTVVNITVKDLNDNSPHFLQAV---------ESVNV-VENWQAGHSIFQAKAVDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSP 197
D V Y L P NL I + G + L G Y++ + A D+ P
Sbjct: 921 DEGVNGMVLYSLKQNPKNLFAINEKNGNISLLGSLDVHAGSYQIEILASDMGVP 974
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 31/176 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN ++F++ N T EIR+ +DRE+V+QY L I +
Sbjct: 2699 PNGQLDYEIVNGNQENSFSI-NHATGEIRSIRP------------LDREKVSQYILTIKS 2745
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D KG T V V ++LDENDN+P FSQ ++ V + NS + + ++
Sbjct: 2746 SD-KGSPSQSTSVKVIINILDENDNAPRFSQ-IFSAHVPE-----NSPLGY-----TVTR 2793
Query: 142 VSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ +D D A Y + S I P TG+++++ +D + Y + V AHD
Sbjct: 2794 VTTSDEDVGVNAISRYSIMDTSLPFTINPSTGDIVISRPLNREDTDLYRIRVSAHD 2849
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 84/188 (44%), Gaps = 26/188 (13%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I +GN+ F L N + + + LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIIRGNEAGRFRLD-----ITLNPSGEGAFLHLVSKGGLDREATPQYQLLVEVED-KGE 227
Query: 90 NKAETH--VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
K + V V V D NDN P+F Y+ V + ++ V SS+ V+A DA
Sbjct: 228 PKRRGYLQVNVTVQDINDNPPIFGSSHYQAGVPE-----DAAVG-----SSVLQVAAADA 277
Query: 148 D---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSPSRYA 201
D + Y+L + P+TG L+T P D +Y LTV+A D PS
Sbjct: 278 DEGTNADIRYRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTVQAMDRGVPSLTG 335
Query: 202 REPAQVWL 209
R A + L
Sbjct: 336 RAEALIQL 343
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1754 GDGSKIMQLTALDADEGANALVTYAIISGADD-SFRI------------DPESGDLIATK 1800
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + + D ND++P FS+ VY F
Sbjct: 1801 -RLDRERRSKYSLLVRADD--GLQSSDMRINITISDVNDHTPKFSRPVYSF 1848
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 80/177 (45%), Gaps = 35/177 (19%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKV 114
K+G + V SG +DRE + SL + A + ++G + E V V VLD ND PVFS +
Sbjct: 3351 KTGQIYV-SGPLDREREERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND-PPVFSLNI 3408
Query: 115 YRFIVGD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLV 163
Y + + S+ +S+ + W +FS IGS + A
Sbjct: 3409 YNVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGA---------------F 3453
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
I PQTG++ +T + + + Y LTV A D +PS V L+ N P+L
Sbjct: 3454 SINPQTGQITVTAELDRETLPIYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVF 110
L T +DREE A YSL++ ATD+ ++ + V +LD NDNSPVF
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDLGSPPQSSMARINVSLLDMNDNSPVF 689
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 59/130 (45%), Gaps = 16/130 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + + A + + VRY I GN N F + +S +G
Sbjct: 2165 ENTLTGTDI--IQVYAADGDEGTNGQVRYGIVGGNVNQEFRI------------DSVTGT 2210
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
+ V +DRE+ Y L + ATD + +T V++ +LD ND PVF Y V
Sbjct: 2211 ITVAK-PLDREKTPTYFLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPYSVNVP 2269
Query: 121 DLKSSLNSNV 130
+ +L S +
Sbjct: 2270 ENLGTLPSTI 2279
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 30/156 (19%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN++ GT V L + A S + + I GN+ F E+++S +
Sbjct: 369 ENAQVGTVVALLTVTDADS-PAANGNISVQILGGNEQRHF--------EVQSSKVPNLSL 419
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAET--------HVTVDVLDENDNSPVFSQK 113
+ V S +DRE + Y+L ++ +D G A + + V D ND+ PVF+Q+
Sbjct: 420 IKVASA-LDRERIPSYNLTVSVSDNYGAPPAAAVQARSSVASLVIFVNDINDHPPVFTQQ 478
Query: 114 VYRFIVGDLKSSLNSNVS-HWKKFSSIGSVSATDAD 148
VYR N+S S + VSATD D
Sbjct: 479 VYRV-----------NLSEEAPPGSYVSGVSATDGD 503
>gi|410913745|ref|XP_003970349.1| PREDICTED: protocadherin gamma-A10-like [Takifugu rubripes]
Length = 806
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 91/187 (48%), Gaps = 41/187 (21%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
RY I Q NDN ++ N V LV +DRE+ + +L++TA D
Sbjct: 154 RY-ILQKNDNFILSVDN-------------KKVELVLENRLDREKQKEINLLLTALDGGS 199
Query: 89 INKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
++ T V V VLD NDN+PVFSQ VY K+SL N + + VSATDA
Sbjct: 200 PQRSGTVVIHVTVLDANDNAPVFSQAVY-------KASLPEN---SPLDTVVMQVSATDA 249
Query: 148 D----GDKVAYKLAVPS----NLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQ 195
D GD V Y L S N+ +I +TGE+ ++G + D E +E+ V+A D
Sbjct: 250 DEGVNGD-VIYNLGHSSEDDANIFIINAKTGEIRVSG---TVDFEENNSFEMRVQAKDGL 305
Query: 196 SPSRYAR 202
+ YA+
Sbjct: 306 GLTSYAK 312
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT+G +DRE V+ Y++ I ATD ++ ++T + + V D NDN PVF ++ Y V
Sbjct: 384 LVTTGQLDRELVSDYNITIRATDEGSPPLSSSKT-LHLSVADINDNPPVFEEESYSAYVS 442
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + + S++ SVSA D D
Sbjct: 443 E----------NNRAGSTLCSVSAGDPD 460
>gi|62339322|ref|NP_001014780.1| protocadherin beta 6 precursor [Rattus norvegicus]
Length = 772
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 14/101 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT +D+ H +TV V+D NDN+PVF+Q Y V +
Sbjct: 402 LVTEGPLDRESRAEYNITITVSDLGTPRLTTQHTITVQVMDINDNAPVFTQTSYTMFVHE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVP 159
NS H IG++SATD+D + Y L P
Sbjct: 462 ----NNSPALH------IGTISATDSDSGSNAHITYSLLPP 492
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + +L++TA D K+ T V ++V+D NDN+P F + +Y V +
Sbjct: 194 LVLDRALDREEQPELTLILTALDGGAPPKSGTTTVRIEVVDINDNAPQFVKSLYAVEVPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
S LN+ V +VSA D D VAY L
Sbjct: 254 -DSPLNALVV---------TVSARDLDAGIHGNVAYSL 281
>gi|390459361|ref|XP_002744356.2| PREDICTED: protocadherin beta-16-like [Callithrix jacchus]
Length = 780
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+T G +DRE A+Y++ ITATD+ K E +TV V D NDN+P F+Q Y V +
Sbjct: 401 LLTEGPLDREIRAEYNITITATDLGTPRLKTEHSITVRVSDVNDNAPAFTQTSYTLFVRE 460
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 461 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDTHLALASLVSINADNGH 510
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 511 LFALRSLDYEALQAFEFRVGATDRGSPA 538
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 52 RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVF 110
+N +E + LV +DREE A+ L + A D + T V V++LD NDN+P F
Sbjct: 181 QNGSEGRKYPELVLHKALDREEQAELRLTLMAVDGGAPPRTGTALVLVEILDINDNAPEF 240
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
Q +Y+ ++ S NS + S + +VSA D D
Sbjct: 241 VQPLYQ-----VQISENSPLE-----SLVATVSARDLD 268
>gi|390459323|ref|XP_003732274.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-17-like
[Callithrix jacchus]
Length = 723
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 78/174 (44%), Gaps = 32/174 (18%)
Query: 37 DNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETH 95
D+H F LK PT L+T G +DRE A+Y++ IT TD+ K E
Sbjct: 388 DHHPFLLK-PTVENFYT---------LLTEGALDRERRAEYNITITVTDLGTPRLKTEHS 437
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KV 152
+TV V D NDN+P F+Q Y V + NS H IG+VSATD D +V
Sbjct: 438 ITVRVSDVNDNAPAFTQTSYTLFVRE----NNSPALH------IGTVSATDRDSGTNAQV 487
Query: 153 AYKLAVPSN-------LVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
Y L P + LV I G L + ++ +E V A D SP+
Sbjct: 488 TYSLLPPQDPHLALAYLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 541
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 28/173 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ + H F RN ++ K LV +DREE Q L +TA D
Sbjct: 171 YTISTNSYFHLFT---------RNHSDGKKYPELVLDQALDREEQPQLRLTLTALDGGSP 221
Query: 90 NKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ T V + ++D NDN+P F+Q++Y V + N+ + S + +VSATD D
Sbjct: 222 PRTGTSQVLIVIVDINDNAPEFAQRLYEVQVPE-----NTPIG-----SLVVTVSATDLD 271
Query: 149 G---DKVAYKLAVPSNLVV----IVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
+++Y SN ++ I TGE+ L ++++ Y + VEA D
Sbjct: 272 AGTHGELSYSFFQYSNQIIQAFEINSITGEIRLKKVLDFEEIQSYHVEVEASD 324
>gi|118090437|ref|XP_420680.2| PREDICTED: protocadherin Fat 1 [Gallus gallus]
Length = 4590
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 124/280 (44%), Gaps = 44/280 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I GN FA+ NP SGV+ V+ +D E + Y+L + T++
Sbjct: 1698 VVYEIKDGNIGDVFAI-NP-----------NSGVI-VSQKVLDFETLPVYTLTVQGTNMA 1744
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G++ T V V + DENDN P+F Q Y ++ + +S+NS V K + + ATDA
Sbjct: 1745 GLSTNAT-VLVHLQDENDNIPIFMQSEYTGLISE-SASVNSVVLTDKNVPLV--IQATDA 1800
Query: 148 DGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQSPSRY 200
D + + Y++ PS I TG + L++ D ++ + +V+ HD+ P Y
Sbjct: 1801 DKESNALLVYQIVEPSVRKYFAIDSSTGAIRTLMSLDYEETNI-FHFSVQVHDMGIPRLY 1859
Query: 201 AREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKR------IDFSE 254
A A V + ++D P + T + PT + ++ ++
Sbjct: 1860 AEYAANV-------------TIYVVDINDCPPVFSRELYDTSILVPTYKGVKVISVNATD 1906
Query: 255 TDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVR 294
D + ++++++ + EKF I + ITV +R
Sbjct: 1907 ADSGIFSQLIYSIIEGNIGEKFTINPKTGDITVQNTTQLR 1946
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ NP K+G++ TS +DRE+ A++ L +T TD
Sbjct: 1175 LTYKITSGNPQGFFSI-NP-----------KTGLITTTSRKLDREQQAEHILEVTVTD-N 1221
Query: 88 GINKAET--HVTVDVLDENDNSPVFSQKVYRF 117
GI T V V VLDENDN P F QK Y+
Sbjct: 1222 GIPAQSTVARVIVKVLDENDNKPQFLQKFYKI 1253
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 90/198 (45%), Gaps = 30/198 (15%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L I AS + + YSI GN++ F++ +S +G + +
Sbjct: 3247 GTEVLQIHAASRDIEANAEITYSIVSGNEHGKFSI------------DSTTGAIFIIDS- 3293
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+D E +Y L + ATD + ++ V ++V D NDN+PVFSQ Y ++ + + L
Sbjct: 3294 LDYESSHEYYLTVEATDGGTPSLSDVVTVNINVTDINDNTPVFSQDTYTAVISE-DAVLE 3352
Query: 128 SNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSDD 182
S+ +V A DADG + + Y + N I P GE+ +T +
Sbjct: 3353 ---------QSVITVMADDADGPSNNHIHYTITDGNQGNPFTIDPSRGEIKVTKLLDREK 3403
Query: 183 VE-YELTVEAHDLQSPSR 199
+ Y LTV+A D SP R
Sbjct: 3404 ISGYTLTVQASDNGSPPR 3421
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 88/201 (43%), Gaps = 28/201 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTF-----ALKNPTTHEIRNSTE 56
ENS + T V G P+ + +P +RY I G++ + F L N IR
Sbjct: 46 ENSAAKTYV-GHPVKMGIYIVNPLWDLRYKIISGDNENLFKAEEYVLGNFCFLRIR---- 100
Query: 57 SKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYR 116
+K G + ++RE Y L + A + + T V V VLD ND P+FS Y
Sbjct: 101 TKGG----NTAILNREVKDHYMLTVKAVEKNTNAETRTKVRVQVLDTNDLRPLFSPTSYS 156
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELL 173
SL N + +SI VSATDAD + Y +++ I P +G ++
Sbjct: 157 V-------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKERTDVFAIHPTSGVVV 206
Query: 174 LTGDPPSDDVE-YELTVEAHD 193
LTG D + YE+ + A D
Sbjct: 207 LTGRLDYLDTKLYEMEILAVD 227
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y+IT GN + F + +P+ EI+ + +DRE+++ Y+L + A+D
Sbjct: 3371 IHYTITDGNQGNPFTI-DPSRGEIK------------VTKLLDREKISGYTLTVQASDNG 3417
Query: 88 GI-NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN PVFS+ Y I+
Sbjct: 3418 SPPRRNTTTVNIDVSDVNDNPPVFSKGNYSIII 3450
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 79/180 (43%), Gaps = 34/180 (18%)
Query: 22 KHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVI 81
K ++ V Y IT G+ FA++N I+N + + +DREE Y L I
Sbjct: 2949 KEVNRQVSYYITGGDLLGQFAVEN-----IQNEWK------VYVKKPLDREEKDHYLLNI 2997
Query: 82 TATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD--LKSSLNSNVSHWKKFSSI 139
TATD G V V VLD NDNSPV + +Y V + L L I
Sbjct: 2998 TATD--GTFATRAVVEVKVLDANDNSPVCEKALYTDTVPEDALPGKL------------I 3043
Query: 140 GSVSATDAD---GDKVAYKLAVP-SNLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHD 193
VSATDAD ++ Y L P + + TGEL L+ D V Y L V+A D
Sbjct: 3044 MQVSATDADIRSNAEITYTLHGPGAEKFRLTADTGELKTLMPLDREQQAV-YYLLVKATD 3102
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 107/254 (42%), Gaps = 44/254 (17%)
Query: 50 EIRNSTESKSGV----------LLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVT 97
EIR S SG+ ++ T+ +DRE + Y L + ATD +G+ + +
Sbjct: 1069 EIRYSIRDGSGMGVFRIDEEKGIIETADHLDRETTSHYWLTVYATD-QGVVPLSSFIEIY 1127
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAY 154
++V D NDN+P ++ VY V + + K S+ + A D D +K+ Y
Sbjct: 1128 IEVGDVNDNAPQTTEPVYYPEV----------MENSPKDVSVIQIEAFDPDSSSSEKLTY 1177
Query: 155 KLAV--PSNLVVIVPQTGELLLTGDPPSDDVE------YELTVEAHDLQSPSRYAREPAQ 206
K+ P I P+TG L+T D E E+TV + + + S AR +
Sbjct: 1178 KITSGNPQGFFSINPKTG--LITTTSRKLDREQQAEHILEVTVTDNGIPAQSTVARVIVK 1235
Query: 207 VWLQF-NSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVR-PTKRIDFSETDGEMEGRIV 264
V + N P Q LQ K P R + R A R P R+ ++ D I
Sbjct: 1236 VLDENDNKP-----QFLQKF-YKIRLPERGKPERERTARREPIYRVIAADKDEGPNAEIS 1289
Query: 265 FALEKETEREKFKI 278
+++E E KF I
Sbjct: 1290 YSIEDGDEHGKFFI 1303
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 30/170 (17%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I+ GN++ +F + + +SG+L + S +DRE +Y+L +T D+
Sbjct: 755 YVISGGNEDSSFIV------------DMESGMLKILS-PLDREVKDKYNLNVTVYDLGIP 801
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKF-SSIGSVSATDA 147
K+ H+ + +LD NDN P F Q Y F+ VS K+ S I + ATD
Sbjct: 802 QKSAWHLLDIRILDANDNPPEFLQDSY-FV----------EVSENKELDSEIIQIEATDK 850
Query: 148 D---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
D +V Y L ++ I TG + + G ++ Y L +EA D
Sbjct: 851 DLGANGEVKYSLLTDTDKFAINAVTGVVKVVGLLDHEEQHIYFLKIEARD 900
>gi|307184798|gb|EFN71112.1| Cadherin-23 [Camponotus floridanus]
Length = 4786
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 69/129 (53%), Gaps = 18/129 (13%)
Query: 54 STESKSGVLLVTSGDI-DREEVAQYSLVITATDVKGI-NKAETHVTVDVLDENDNSPVFS 111
+ +S +G++ V+ G I DRE AQ L I A D G N + V++LD NDN+P+F
Sbjct: 2393 TIDSDTGLITVSMGSILDREMAAQLQLTIHARDENGKGNTGVASLIVNLLDVNDNAPIFE 2452
Query: 112 QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD----KVAYKL--AVPSNLVVI 165
+ Y FI LNS++S+ F++ + ATDAD + ++ Y+L N +
Sbjct: 2453 KNAYEFI-------LNSDLSN---FTTPAIIKATDADAEPPNNEIRYELIHGNYENKFYL 2502
Query: 166 VPQTGELLL 174
TGEL+L
Sbjct: 2503 NEITGELIL 2511
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 100/239 (41%), Gaps = 43/239 (17%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V + L S +RY+ G+ H A+ +P T GV
Sbjct: 504 ENCAKGTTVAWVQALDEDSGNFGTNGIRYTSLGGSIAHVLAM-DPLT-----------GV 551
Query: 62 LLVT--SGDIDREEVAQYSLVITATDVKGI-NKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ V DRE VA++ L + A D G N+ + V+V D NDN+P+F Q Y I
Sbjct: 552 ITVKYPGPSFDRELVARHYLTVEARDDLGKGNRNAAQLIVNVKDVNDNAPIFLQNKYEAI 611
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVP--SNLVVIVPQTG--- 170
+ + K S + I S D +G + ++Y L S I P+ G
Sbjct: 612 LLENKDQFESPL--------IVEASDNDLNGTRNSEISYALVSSEFSRNFTIDPKLGLVT 663
Query: 171 -------ELLLTGDPPSDDV--EYELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQ 217
E L T +++ + +LTV A D +PS + P ++L+ N+PV +
Sbjct: 664 PIRPLDYEALPTNQGYKENIIRQLKLTVRARDAGTPSLTSDVPLIIYLKDINDNAPVFE 722
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 106/258 (41%), Gaps = 46/258 (17%)
Query: 69 IDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+DRE V L + D V+ + A + + + DENDN+P F + YR
Sbjct: 910 LDRERVETIRLGLVVEDLAAVRSLQTASAILNIIIEDENDNNPKFRRPFYR--------- 960
Query: 126 LNSNVSHWKKFSSIGSVSATDADGDK-VAYKLAVPSNLVVIV---PQTGELLLTGDPPSD 181
S + K +I ++ A DAD ++ + Y L P ++ +V P+TGE+++ +
Sbjct: 961 -RSVTENSKNGINIANIVADDADKNRSITYSLQGPKEIIDLVHLDPETGEMVVASKIDRE 1019
Query: 182 DVEY-ELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRV 240
+ LTV A D P R + E +Q++D P+ +
Sbjct: 1020 MYSWLNLTVRATDSGIPPRSSLS---------------EIYVQVLDENDNNPYFVSNISS 1064
Query: 241 TRAVRPTK------RIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGD-- 292
+ +K I +++D G+I + L++ + + F I E +TV + D
Sbjct: 1065 VSVMENSKIGTEITVIQATDSDSGDYGKITYLLDRMSSQGTFAIHPETGSLTVADVLDWE 1124
Query: 293 -----VRVKKRWDFEELG 305
V V + WD + G
Sbjct: 1125 TKHSYVLVIEAWDNYQFG 1142
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 58/117 (49%), Gaps = 18/117 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+V + IDRE + +L + ATD GI + + + V VLDENDN+P F + V
Sbjct: 1010 MVVASKIDREMYSWLNLTVRATD-SGIPPRSSLSEIYVQVLDENDNNPYFVSNISSVSVM 1068
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD-GD--KVAYKLAVPSN--LVVIVPQTGEL 172
+ NS + + I + ATD+D GD K+ Y L S+ I P+TG L
Sbjct: 1069 E-----NSKIG-----TEITVIQATDSDSGDYGKITYLLDRMSSQGTFAIHPETGSL 1115
>gi|397518010|ref|XP_003829193.1| PREDICTED: protocadherin beta-9 [Pan paniscus]
Length = 797
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 22/149 (14%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ IT TD+ K E +T+ V D NDN+P F+Q Y V
Sbjct: 402 ILMTEGALDRESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVR 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H +GSVSATD D +V Y L P ++LV I G
Sbjct: 462 E----NNSPALH------VGSVSATDGDSGTNAQVTYSLLPPQDPHLPLTSLVSINADNG 511
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 512 HLFALRSLDYEALQAFEFRVGATDRGSPA 540
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + SL +TA D +++ T + + VLD NDN+P F+Q +Y +
Sbjct: 194 LVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALY-----E 248
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVV----IVPQTGELLL 174
++ NS V S I VSA DAD +V+Y S ++ I P +GE+ L
Sbjct: 249 TQAPENSPVG-----SLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFL 303
>gi|296485247|tpg|DAA27362.1| TPA: protocadherin beta 17-like isoform 2 [Bos taurus]
Length = 796
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 77/159 (48%), Gaps = 22/159 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DREE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 402 LVTEGALDREEKAEYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPTFTQTSYTLWVRE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYK-------LAVPSNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L ++LV I P G
Sbjct: 462 ----NNSPALH------IGSVSATDTDAGANAQVTYSLLPPPDPLVPLASLVSINPDNGH 511
Query: 172 LL-LTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL 209
L LT +E V A D SP+ ++ +V +
Sbjct: 512 LFALTSLDYEALRAFEFRVGATDRGSPALSSQALVRVLV 550
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 26/195 (13%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE-------IRNSTESKSGVLLVTSG 67
+L S HP I Q D + ++N T RN ++ + LV
Sbjct: 138 LLKISESSHPGSAYPLKIAQDLDVGSNTVQNYTISSNFHFHLFTRNHSDGRKYPELVLDQ 197
Query: 68 DIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
++DREE + L +TA D K T V + VLD NDN+P F+Q++Y+ V +
Sbjct: 198 ELDREEQPELRLTLTAMDGGSPPKTGTSQVLIIVLDINDNAPEFAQQLYQVQVPE----- 252
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVV----IVPQTGELLLTGDPP 179
NS + S + +VSA D D +++Y SN V+ + TG++ L
Sbjct: 253 NSPIG-----SLVITVSARDLDAGIHGELSYSFFQSSNQVIQAFEVNTATGDIRLKKKLD 307
Query: 180 SDDV-EYELTVEAHD 193
+++ Y + +EA D
Sbjct: 308 FEEIRSYHMEIEASD 322
>gi|301779203|ref|XP_002925014.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16-like [Ailuropoda
melanoleuca]
Length = 3271
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+ G L +G +D E+ +Y L + A D G ++ ++TV V D NDN+P FSQ +Y+
Sbjct: 2299 RYGGRLSLTGPLDFEQRDRYHLQLLAHD--GPHEGRANLTVFVEDVNDNAPAFSQSLYQV 2356
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLL 174
+ + H S+I SVSATD D ++Y LA P+ + P G L
Sbjct: 2357 TL----------LEHTPPGSAILSVSATDRDSGANGHISYHLASPAEGFSVDPNNGTLFT 2406
Query: 175 TGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWLQ 210
T + E ++ +EA D P R AR V LQ
Sbjct: 2407 TVGTVAFGQEGPGVVDVVLEARDHGMPGRAARATVHVQLQ 2446
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV------LLVTSGDIDREEVAQYS 78
H V YSI GN F L+ P E TE SG+ LV +D E + QY+
Sbjct: 2488 HATVDYSIVSGNRGRVFQLE-PRLAE----TEEGSGLGPRALGCLVLLEPLDFESLTQYN 2542
Query: 79 LVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
L + A D + + VTV VLD NDN PVFS+ YR V
Sbjct: 2543 LTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFSRASYRMAV 2584
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 25/131 (19%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LVR++++ G+ + F L + SG L + +D E A++ LV+ A
Sbjct: 2606 PHGLVRFTLSSGDPSGLFEL------------DESSGALRLAH-PLDCETQARHQLVVQA 2652
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G + A VT++V D ND+ PVF + L +SL N +++ ++
Sbjct: 2653 ADPAGAHFALAPVTIEVQDVNDHGPVFPLSL-------LSTSLAENQPPGTLVTTLHAI- 2704
Query: 144 ATDADGDKVAY 154
DGD A+
Sbjct: 2705 ----DGDAGAF 2711
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 105/270 (38%), Gaps = 47/270 (17%)
Query: 43 LKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDV 100
L P++ E+R +T +DRE+ Y+ ++A D T VT+ V
Sbjct: 1876 LLEPSSGELRTATA------------LDREQCPSYAFSVSAVDGAAAGPLSTTVPVTITV 1923
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA 157
D ND++P F R + SL++ ++ ++ A D D + Y+LA
Sbjct: 1924 RDVNDHAPTFPTSPLRLRLPRPGPSLSTPT------LALATLRAEDRDAGANASILYRLA 1977
Query: 158 -VPSNLVVIVPQTGELLLTGDP----PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFN 212
P + TGE+ +T P P D V L V A DL P+R A V LQ
Sbjct: 1978 GTPPPGTTVDSYTGEIRVTRSPVALGPRDRV---LFVVATDLGRPARSATGVVIVGLQGE 2034
Query: 213 SPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETE 272
S E+ + SEA R T V P + G G I +++ E
Sbjct: 2035 S-----ERGPRFPRTSSEAMLRENAPPGTPIVSPK-----AVHAGGSSGPITYSILSGNE 2084
Query: 273 REKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ F I+ IT VR + DFE
Sbjct: 2085 KGTFAIQPSTGAIT------VRSAEGLDFE 2108
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 6/135 (4%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE + Y L++ D ++ T V + VLD NDNSP F Q G L +
Sbjct: 1166 LDRERQSSYQLLVQVQDGGSPPRSTTGTVHIAVLDLNDNSPSFLQ-ASGAAGGGLPIQVP 1224
Query: 128 SNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGELLLTGDP--PSDDVE 184
V +++ + + + + Y L P S L + P +GE LLT P ++
Sbjct: 1225 DRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGE-LLTAAPLIRAERPH 1283
Query: 185 YELTVEAHDLQSPSR 199
Y LT+ AHD SP R
Sbjct: 1284 YVLTLSAHDQGSPPR 1298
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ TF L E R + LV +G++DRE +QY L + A D
Sbjct: 177 YALSGDGAGQTFQL------ETRPGPDGAPVPELVVTGELDRENRSQYMLQLEAYDGGSP 230
Query: 90 -NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+A+ + V +LD ND++P F+Q Y +V
Sbjct: 231 PRRAQALLDVTLLDINDHAPAFNQSRYHAVV 261
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 403 EGGEGH-FAL----------STQDSVIYLVCVARQLDREERDAYNLRVTATDSGSPPLRA 451
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + V D NDN+P F +++YR
Sbjct: 452 EATFVLHVTDVNDNAPTFDRQLYR 475
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 69/156 (44%), Gaps = 24/156 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVK----GINKAETHVTVDVLDENDNSPVFS 111
E +SG L V + +DRE Y+L + A G V V +L++ND+SP S
Sbjct: 1045 EPQSGWLWVRAA-LDREAQELYTLKVMAVSGSKAELGQQTGTATVRVSILNQNDHSPRLS 1103
Query: 112 QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYK---LAVPSNLVVI 165
++ V + + +S+G V ATD D ++ Y L+ SN I
Sbjct: 1104 EEPTFLAVAE----------NQPPGTSVGRVFATDRDSGPNGRLTYSLRPLSEDSNAFRI 1153
Query: 166 VPQTGEL--LLTGDPPSDDVEYELTVEAHDLQSPSR 199
PQTGE+ L T D Y+L V+ D SP R
Sbjct: 1154 HPQTGEMTTLQTLD-RERQSSYQLLVQVQDGGSPPR 1188
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y + G D + F L S +G L V +DRE+ A++ L + A+D
Sbjct: 1553 VSYRLAAGGDGY-FRL------------HSSTGALSVVR-SLDREQRAEHILTVVASDHG 1598
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIV 119
++ T + TV V D ND +P F Q+ Y ++
Sbjct: 1599 SPPRSATQLLTVSVADVNDEAPAFQQQEYSVLL 1631
>gi|291223058|ref|XP_002731529.1| PREDICTED: fat-like [Saccoglossus kowalevskii]
Length = 4968
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 30/151 (19%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
LV YS+TQGN + F + ++N+ +DRE Y++ + A+D
Sbjct: 1011 LVTYSVTQGNTENKFGIFPDGNLYVKNA--------------LDRENTDIYTITVVASD- 1055
Query: 87 KGINKAETH--VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
G+ + + VT+ VLD NDN P+F+ + Y F L L+ NV +G V+A
Sbjct: 1056 NGVPQRSSSAVVTIHVLDANDNRPLFNLQDYSFF---LLEELSPNV-------YVGKVTA 1105
Query: 145 TDAD---GDKVAYKLAVPSNLVVIVPQTGEL 172
TDAD +++Y+ VI PQ GE+
Sbjct: 1106 TDADIGRNAELSYRFTETQTDFVINPQNGEI 1136
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 116/268 (43%), Gaps = 51/268 (19%)
Query: 37 DNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHV 96
DN FA+ N T GV+ V +GDIDREE Y + + A+++ G +T +
Sbjct: 2807 DNPFFAIDNLT------------GVVTV-AGDIDREEHEHYDVNVVASNLDGSYPKQTTI 2853
Query: 97 TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD-----K 151
VD+LD ND++PVF VY + + S + ++A+DAD + +
Sbjct: 2854 QVDILDINDHAPVFDPDVY----------ITERPEGIPEGSLVMKLTASDADKEGTINSE 2903
Query: 152 VAYKLAVPSNLVVIVPQTGELLL-------TGDPPS--DDVEYELTVEAHDLQSPSRYAR 202
++Y + S+ + +TGE++ T DP S D Y +V A D P+ +
Sbjct: 2904 ISYSMKTWSDYFDVNSETGEVIYKQQIEYQTPDPDSNVDPNLYNFSVFAIDNGLPTLWGE 2963
Query: 203 EPAQV-WLQFN--SPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEM 259
V L N +PV ++ + + R +AP V V +D E D +
Sbjct: 2964 ARVSVTILDANEYAPVFVEDLYIAGVTR--DAP-------VNSKVVQVSAVD--EYDKGI 3012
Query: 260 EGRIVFALEKETEREKFKIRDENPWITV 287
+ +++ +KF I WITV
Sbjct: 3013 NAVVQYSIVGGNGTDKFDIESLTGWITV 3040
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 116/268 (43%), Gaps = 41/268 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y I GND + N T +IR T ++DRE Y+L I+A+D
Sbjct: 1760 IAYRIVSGNDGKFYI--NEQTGQIR------------TMDELDRETTPSYTLAISASD-- 1803
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G + T + + +LD NDN P FS+ VY F+V + ++ +S+G V A D
Sbjct: 1804 GDLSSITTLDIYLLDANDNPPEFSKSVYAFVVSESET----------IGTSVGEVIAIDP 1853
Query: 148 D---GDKVAYKLAVP--SNLVVIVPQTGELLLTGDPPSDDVEYEL-TVEAHDLQSPSRYA 201
D V Y + + + +G L ++V+Y L VEA D +PS
Sbjct: 1854 DEGSNGNVTYSILEDWGQDRFSLDSYSGIFTLDKKLDFEEVQYYLIVVEASDGGTPSL-- 1911
Query: 202 REPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEG 261
+ V F++ + D + + D S H IE V +V ++ ++ D G
Sbjct: 1912 --SSSVSCYFSTTDVNDN--VPIFDPSSYDAHVIEDVDVGYSV---VKVTATDADAGPNG 1964
Query: 262 RIVFALEKETEREKFKIRDENPWITVDE 289
I +++ + E+F+I ++ +T E
Sbjct: 1965 AISYSITAGDDGEEFQILEDGTIVTAKE 1992
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 15/88 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
+ Y IT GN+ + F + NP+T +I + GVL DRE V QY L ++A D
Sbjct: 1225 ITYYITDGNEGNQFHI-NPSTGQI-----TLIGVL-------DREAVPQYILTVSAVDHG 1271
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQK 113
+ T V + VLDENDN+PVF+Q
Sbjct: 1272 TPQLLSTTTQVVITVLDENDNAPVFAQS 1299
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 115/260 (44%), Gaps = 35/260 (13%)
Query: 30 YSITQGN-DNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
Y+I GN D+ F L T N + + + + +VT+ +DRE Y L I+A D G
Sbjct: 162 YAIVGGNTDDELFRLVVTT-----NPSGAAAFLHVVTTHTLDREAQDFYQLNISAQD-GG 215
Query: 89 INKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
I + VD+ D NDN PVF Y S + + + + +V ATD
Sbjct: 216 IPPRFGFLLVDITIRDANDNPPVFDPSEYEV----------SLIESIEPDTLVLTVRATD 265
Query: 147 AD---GDKVAYKLAVPSNLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQSPSRYA 201
D ++ Y L +L I P TGE+ L D S+++ Y +TVEA D +P++Y
Sbjct: 266 RDIGENAEIIYFLDEREDLFTIHPSTGEIRTLRELDFESNEI-YTVTVEAKDKGNPTQYG 324
Query: 202 REPAQVWL---QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGE 258
R V L +SPV+ + I SE ++ + + + ++ D
Sbjct: 325 RAYVHVRLLDENDHSPVIT----FRFI-PSSETVAKVAEETAVGTIIAIATV--TDEDEG 377
Query: 259 MEGRIVFALEKETEREKFKI 278
+ G+ + + E+E F+I
Sbjct: 378 LNGQTSIQITRGNEQEHFRI 397
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 118/281 (41%), Gaps = 63/281 (22%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT+GND F + T L+ T +DRE ++ L ITA D +
Sbjct: 489 IFYRITEGNDLDWFEIDENTG-------------LITTKSALDREIASRIVLNITAQD-Q 534
Query: 88 GINK--AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFS---SIGSV 142
G + AETH+ +++ DEND++P F Y NV+ + F+ + V
Sbjct: 535 GATQHLAETHIIINIADENDDAPTFVITSY-------------NVTIMENFTPPREVVIV 581
Query: 143 SATDADG---DKVAYKLA------VPSNLVVIVPQTGEL--LLTGDPPSDDVEYELTVEA 191
SATD D +V+Y LA P + I+ TG++ L+T D + EY L+V A
Sbjct: 582 SATDMDSGVNGEVSYTLADHVEMDYPG-VFTIIENTGKIMTLVTFDRETIP-EYTLSVIA 639
Query: 192 HDLQSPSRYAREPAQVWLQF-----NSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRP 246
D R + QV L+ NSP+ ID A ++ +V+
Sbjct: 640 TDGGVLPRSST--TQVNLKVGDLNDNSPIFYPVNYYGEIDENQPAGTTVKHGQVS----- 692
Query: 247 TKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
+DF GR+ + + + +F I D N + +
Sbjct: 693 ATDLDFGSY-----GRVAYTIIQGNSDGRFSI-DRNSGVII 727
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 129/314 (41%), Gaps = 63/314 (20%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN +GT VK + + V Y+I QGN + F++ RNS GV
Sbjct: 678 ENQPAGTTVKHGQVSATDLDFGSYGRVAYTIIQGNSDGRFSID-------RNS-----GV 725
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKG---INKAETHVT-VDVLDENDNSPVFSQKVYRF 117
++ T+ +DRE+ Y L+I A D G I A H+T VD+L DN P F + Y F
Sbjct: 726 IIATTS-LDREQKNSYQLIINAQDDGGRSAIPYATVHITVVDIL---DNPPQFDKLGYTF 781
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPS----NLVVIVPQTGELL 173
+ N + H S+G VSA+ D + A+ S N+ I +GE+
Sbjct: 782 EFFE-----NVALGH-----SVGRVSASTGDQSSIL-SYAISSGDRDNVFQIDSVSGEIT 830
Query: 174 LTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
+ + Y+LTV + PV+ + I K++
Sbjct: 831 TAKEIDREVTPFYQLTVIVN-------------------GGPVVGQTLVNITISDKNDNS 871
Query: 233 HRIEKRRVTRAV-------RPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWI 285
+ +T AV ++I ++ D G+IV+ L + + +KF+I + WI
Sbjct: 872 PEFPQPMITTAVVENWSVGHEVQQIHATDRDDGPNGQIVYELLRNPD-QKFRIDETTGWI 930
Query: 286 TVDENGDVRVKKRW 299
++ D V+ +
Sbjct: 931 YLNLPVDSSVRTYY 944
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 45/211 (21%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + YSIT G+D F + T +VT+ ++DRE YSL ITA
Sbjct: 1962 PNGAISYSITAGDDGEEFQILEDGT--------------IVTAKELDRELKEYYSLDITA 2007
Query: 84 TD--VKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG 140
+D ++G + T V++ + D NDN+P F ++L + ++++
Sbjct: 2008 SDQPLEGTPQTATARVSIVIGDVNDNAPEFQ-----------NTNLTTVSEDAGAYTTVV 2056
Query: 141 SVSATDAD-GDK--VAYKLA------VPSNLVVIVPQTGELLLTGDPPSDDVEYELTVEA 191
+ ATDAD GD V Y + + S+ V++V G L D +Y LTV A
Sbjct: 2057 ELVATDADAGDNGDVDYSMESMSEFFLTSDDVIVVSDDGVL-----DRETDAQYVLTVYA 2111
Query: 192 HDLQSPSRYAREPAQVWLQ---FNSPVLQDE 219
D P R + V +Q N+P E
Sbjct: 2112 WDKGVPRRTSTMQITVIIQDVNDNAPAFSSE 2142
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 22/106 (20%)
Query: 12 GLPILVASSHKH----PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSG 67
G+ +L S+ + P L Y I GN N+ FA+ + ++GV+ TS
Sbjct: 3421 GVSVLTVSAEDYDLNEPDNLFSYEIVGGNINNAFAI------------DQQTGVI-STSA 3467
Query: 68 DIDREEVAQYSLVITATDVKGINKAET---HVTVDVLDENDNSPVF 110
+DREE+ Y+L + A D G N +T V + + D NDN P+F
Sbjct: 3468 VLDREEIQLYNLTVAAVD--GGNPPQTGYAEVEISIDDVNDNGPMF 3511
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 77/176 (43%), Gaps = 29/176 (16%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V+Y + GN TF H RN E + +D E ++ Y L I A D
Sbjct: 2596 VVKYYMAAGNFQETF-------HVDRNRGE------VTIEKPLDYEVMSYYQLWIEAKDD 2642
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+ + TV V D NDN+PVF+++VY S + +S+ +VSA D
Sbjct: 2643 D--HSSYISCTVHVTDVNDNAPVFTERVY----------FASVLEGEDSGTSVVTVSAID 2690
Query: 147 ADG---DKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD-DVEYELTVEAHDLQSPS 198
D +V Y L ++ I QTGEL T + + Y LT+ A D +PS
Sbjct: 2691 HDSGSNGQVLYLLQSATDDFAIDSQTGELTTTKVLDRETNAFYTLTIHAVDQGTPS 2746
Score = 43.9 bits (102), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 21/142 (14%)
Query: 62 LLVTSGDIDREEV--AQYSLVITATD----VKGINKAETHVTVDVLDENDNSPVFSQKVY 115
++ TS +IDRE++ + +V+ A D V A VT+ VLD NDN+PVF +
Sbjct: 1458 MISTSAEIDREDLPNGMFEIVVMAKDQAIPVSNRKSATKRVTIMVLDINDNAPVFVSQNA 1517
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP-SNLVVIVPQTGE 171
I ++S+L + + +V+A D D +V+Y L+ +N I TG+
Sbjct: 1518 ATI---MESTLTG--------ADVTTVTAVDPDAGSNGEVSYSLSESVNNPFSIHETTGK 1566
Query: 172 LLLTGDPPSDDVEYELTVEAHD 193
L L+G S + Y LTV A D
Sbjct: 1567 LTLSGYLLSSRLVYPLTVIATD 1588
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 93/209 (44%), Gaps = 36/209 (17%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
EN++ G+ + L +L + + +RYS GND+ FA+ S++G
Sbjct: 3096 FENAQIGSSI--LTVLATDNDVGKNGDIRYSFASGNDDGLFAIG------------SENG 3141
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDV--LDENDNSPVFSQKVYRFI 118
V+ V ++D E + L ++A D+ G+ E+ VDV +D NDNSP F + Y
Sbjct: 3142 VITVAE-ELDFEAQDTHILNVSARDL-GVISLESFARVDVVLIDVNDNSPEFESQEYNPT 3199
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSN--LVVIVPQTGELL 173
+ + S +S+ + ATDAD + YK+ VI Q G +
Sbjct: 3200 IPENSPS----------GTSVVTCVATDADSTSNAVIVYKIIGGDGQYYFVINRQNGTIF 3249
Query: 174 LTGDPPSDDVE--YELTVEAHDLQSPSRY 200
+D + YELTV A + + PS Y
Sbjct: 3250 SQSHLNYEDEKKSYELTVRAEN-EEPSMY 3277
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 125/299 (41%), Gaps = 60/299 (20%)
Query: 50 EIRNSTESKSGVLLV-TSGDI------DREEVAQYSLVITATDVKGINKAETHVT-VDVL 101
EI + + G+ + TSG++ DRE +A+Y L I +D + + + + V
Sbjct: 2282 EILQVSAGQEGLFTIDTSGNVYVNEVLDRETIAEYHLNIQVSDNGNPSLTSSALLEIQVG 2341
Query: 102 DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPS 160
D NDN P+ FIV + +S+ + +++ +V+A DAD G K + +
Sbjct: 2342 DVNDNPPI-------FIVTNSSASV---LEEQPINTTVTTVTARDADEGVNAHIKYHITN 2391
Query: 161 NLVVIVPQTGEL----LLTGDPPSDDVEYELTVEAHD---LQSPSRYAREPAQVWLQF-- 211
+ I P TGE+ +L + ++ Y L V A D + SP + A V++
Sbjct: 2392 DKFTINPLTGEIRTNAVLNRE---ENAIYVLEVIATDKVNVNSPDILSST-ATVYVTVVD 2447
Query: 212 ---NSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEM--EGRIVFA 266
N P +D +I + +T AV T S D ++ G I +A
Sbjct: 2448 INDNDPAFEDLPYYAVIKEVE------DYTGLTGAVADTYIYAASTNDADIGTNGLIHYA 2501
Query: 267 LEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGGP 325
+ K + KFKI NG V+V D + D+WV I A +GGP
Sbjct: 2502 ISKSNPQSKFKIG--------SRNGVVQVSSSLDAGD-------DYWVEIT--ARDGGP 2543
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 13/90 (14%)
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYRFI 118
+++ G +DRE AQY L + A D KG+ + + +TV + D NDN+P FS + Y
Sbjct: 2089 IVVSDDGVLDRETDAQYVLTVYAWD-KGVPRRTSTMQITVIIQDVNDNAPAFSSESY--- 2144
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K + N+ K+F V ATDAD
Sbjct: 2145 ----KVEVMENMPTGKEFF---QVVATDAD 2167
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 22/101 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
++Y IT ND T NP T EIR T+ ++REE A Y L + ATD
Sbjct: 2385 IKYHIT--NDKFTI---NPLTGEIR------------TNAVLNREENAIYVLEVIATDKV 2427
Query: 88 GINKAE-----THVTVDVLDENDNSPVFSQKVYRFIVGDLK 123
+N + V V V+D NDN P F Y ++ +++
Sbjct: 2428 NVNSPDILSSTATVYVTVVDINDNDPAFEDLPYYAVIKEVE 2468
>gi|73949388|ref|XP_849204.1| PREDICTED: protocadherin beta-18 [Canis lupus familiaris]
Length = 795
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 113/256 (44%), Gaps = 51/256 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G +DRE A+Y++ IT +D+ K + ++TV V D NDN+P FSQ Y V +
Sbjct: 404 LVTNGALDRESQAEYNITITVSDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRE 463
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IG+VSATD D +V Y L P ++LV I G+
Sbjct: 464 ----NNSPALH------IGTVSATDRDAGANAQVTYSLLPPRDPHLPLASLVSINADNGQ 513
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ-----L 221
L + ++ +E+ V A D SP+ ++ +V + N+P VL Q
Sbjct: 514 LFALRSLDYEALQAFEVRVGAADRGSPALSSQALVRVLVLDDNDNAPFVLYPLQNGSAPC 573
Query: 222 LQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDE 281
+++ R +EA + + K + D + F L K TE F +
Sbjct: 574 TELVPRAAEAGYLVTKVVAV------------DGDSGQNAWLSFQLLKATEPGLFGV--- 618
Query: 282 NPWITVDENGDVRVKK 297
W NG+VR +
Sbjct: 619 --WA---HNGEVRTAR 629
>gi|281345414|gb|EFB20998.1| hypothetical protein PANDA_000355 [Ailuropoda melanoleuca]
Length = 2559
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 95/197 (48%), Gaps = 32/197 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G +DRE A Y++ IT TD+ K + +++V V D NDN+P FSQ Y V +
Sbjct: 2175 LVTNGALDRESKALYNITITVTDLGTPRLKTQHNLSVTVSDVNDNAPAFSQSSYTLRVRE 2234
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP--------SNLVVIVPQTG 170
NS H IGSVSATD D +V Y L +P ++LV I G
Sbjct: 2235 ----NNSPALH------IGSVSATDRDAGANAQVTYSLLLPPHDPHLPLASLVSINADNG 2284
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ----- 220
+L + ++ +E V A D SP+ ++ +V + N+P VL Q
Sbjct: 2285 QLFALRALDYEALQAFEFGVRAADRGSPALSSQALVRVLVVDDNDNAPFVLYPLQNGSAP 2344
Query: 221 LLQMIDRKSEAPHRIEK 237
+++ R +EA + + K
Sbjct: 2345 CTELVPRAAEAGYLVTK 2361
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 103/223 (46%), Gaps = 42/223 (18%)
Query: 37 DNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETH 95
DN F LK PT K+ LVT +DRE A+Y++ IT TD+ K + +
Sbjct: 1381 DNLPFLLK-PTF---------KNFYTLVTESPLDRESQAEYNITITVTDLGTPRLKTQHN 1430
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KV 152
++V V D NDN+P FSQ Y V + NS H IGSVSATD D +V
Sbjct: 1431 LSVTVSDVNDNAPAFSQSSYTLRVRE----NNSPALH------IGSVSATDRDAGANAQV 1480
Query: 153 AYKLAVP--------SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYARE 203
Y L +P ++LV I G+L + ++ +E V A D SP+ ++
Sbjct: 1481 TYSLLLPPHDPHLPLASLVSINADNGQLFALRALDYEALQAFEFGVRAADRGSPALSSQA 1540
Query: 204 PAQVWL---QFNSP-VLQDEQ-----LLQMIDRKSEAPHRIEK 237
+V + N+P VL Q +++ R +EA + + K
Sbjct: 1541 LVRVLVVDDNDNAPFVLYPLQNGSAPCTELVPRAAEAGYLVTK 1583
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 94/197 (47%), Gaps = 32/197 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT TD+ K + +++V V D NDN+P FSQ Y V +
Sbjct: 699 LVTEVPLDRERQAEYNITITVTDLGTPRLKTQHNLSVTVSDVNDNAPAFSQSSYTLRVRE 758
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP--------SNLVVIVPQTG 170
NS H IGSVSATD D +V Y L +P ++LV I G
Sbjct: 759 ----NNSPALH------IGSVSATDRDAGANAQVTYSLLLPPHDPHLPLASLVSINADNG 808
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ----- 220
+L + ++ +E V A D SP+ ++ +V + N+P VL Q
Sbjct: 809 QLFALRALDYEALQAFEFGVRAADRGSPALSSQALVRVLVVDDNDNAPFVLYPLQNGSAP 868
Query: 221 LLQMIDRKSEAPHRIEK 237
+++ R +EA + + K
Sbjct: 869 CTELVPRAAEAGYLVTK 885
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 45 NPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDV 100
+P +H +IR+S++ K LV +D EE + +L +TA D ++ T V + V
Sbjct: 173 SPNSHFYIKIRDSSDGKLYPELVLDRALDHEEEPELTLTLTALDGGSPPRSGTTLVLIKV 232
Query: 101 LDENDNSPVFSQKVY 115
LD NDN+P F+QK+Y
Sbjct: 233 LDINDNAPQFAQKLY 247
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 13/117 (11%)
Query: 35 GNDNHTFALKNPTTH-EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA- 92
G N+T + NP H ++++S + + L+ +DRE+ ++ L +TA D ++
Sbjct: 461 GVQNYTLS-PNPYFHLKLQDSDDGRKYPELLLDQSLDREKEPEFRLTLTALDGGSPPRSG 519
Query: 93 ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
T V + VLD NDN+P F + VY V + NS V S + VSATD D
Sbjct: 520 TTLVHILVLDINDNAPEFERPVYEVQVPE-----NSPVD-----SLVVRVSATDLDA 566
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 52 RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVF 110
RNS + LV +DREE + L + A D K T V +D+LD NDN+P F
Sbjct: 1124 RNSGGGRKYPELVLDKALDREEQPELRLTLLAVDGGVPPKTGTALVLIDILDINDNAPEF 1183
Query: 111 SQKVY 115
Q +Y
Sbjct: 1184 VQPLY 1188
>gi|127138947|ref|NP_001076031.1| protocadherin gamma-B2 precursor [Pan troglodytes]
Length = 931
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 34/206 (16%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQK 113
+ SK+ LVT G +DREE+ +Y+L ITATD K + VT+ + D NDN+PVF Q
Sbjct: 396 SSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPLSSSIIVTLHISDVNDNAPVFQQT 455
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL-------- 162
Y V + + +SI +SA+D D +V+Y + V S+L
Sbjct: 456 SYMVHVAE----------NNPPGASIAQISASDPDLGPNGQVSYSI-VASDLKPREILSY 504
Query: 163 VVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVL-- 216
V + PQ+G + + + +ELT++A D SP+ A +V L N+P +
Sbjct: 505 VSVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLNDNAPRVLY 564
Query: 217 -----QDEQLLQMIDRKSEAPHRIEK 237
L M+ R +E + + K
Sbjct: 565 PALGSDGSALFDMVPRAAEPGYLVTK 590
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++K GT P L S P+ L RY + NDN F L T + R E
Sbjct: 144 ESTKPGTTFPLDPAL--DSDVGPNSLQRYHL---NDNEYFDLAEKQTPDGRKYPE----- 193
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYR 116
L+ +DREE + + LV+TA D ++ T + V V D NDN PVFSQ VYR
Sbjct: 194 -LILQHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRVKVTDANDNPPVFSQDVYR 248
>gi|162312016|gb|ABX84114.1| hedgling [Nematostella vectensis]
Length = 3480
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 70/162 (43%), Gaps = 29/162 (17%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
++ SS P+ +RYSI GND F + +S +G + T DRE
Sbjct: 489 VITVSSSVSPN--LRYSIMDGNDQGMFTI------------DSSTGSITTTGRKFDRESE 534
Query: 75 AQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHW 133
++Y L + A D +K T V +DV DENDN+P F Y F N+
Sbjct: 535 SRYRLTVLAQDAANRCHKGRTVVVIDVKDENDNAPEFPLNSYVF-----------NIREN 583
Query: 134 KKFSSIGSVSATDADGD---KVAYKLAVPSNLVVIVPQTGEL 172
+ + V+ATD D + Y L N ++ +TGE+
Sbjct: 584 TPAAQVAIVTATDRDSGTNAAITYSLFSGENKFMMNSKTGEI 625
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 61/114 (53%), Gaps = 17/114 (14%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS T V L + S + ++RYSI GND F + S SGV
Sbjct: 2031 ENSAQSTSV--LTVAADDSDVGANAVLRYSIISGNDEKRFKIN------------STSGV 2076
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
++ T+ +D EE +QY L +TATD K A+T+VT+ V++ ND +P F+Q+ Y
Sbjct: 2077 IMTTT-PLDFEEKSQYGLEVTATDSK--YTAKTNVTIRVINLNDITPAFTQQNY 2127
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 114/270 (42%), Gaps = 50/270 (18%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
+ I +GN +F + +S L+ + +DRE A Y+LV+ AT+
Sbjct: 1639 FDIVEGNAGSSFKID-------------QSSGLISVAKRLDRETTANYTLVVRATETGSQ 1685
Query: 90 NKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
++ + T+ VLD NDN+PVF+ G SL+ N+ + ++ V+ATD D
Sbjct: 1686 GESVYNNATIRVLDVNDNAPVFNP-------GSYAKSLHENLPIGQ---TVAKVTATDRD 1735
Query: 149 ---GDKVAYKLAVP-SNLVVIVPQTGELLLTGDPP---SDDVEYELTVEAHDLQSPSRYA 201
KV Y+L+V ++ + P TG L+T P D Y L V A D PS+ A
Sbjct: 1736 EGENAKVTYELSVGDTSKFEVNPATG--LVTTKRPLDREDQASYSLRVTAMDHGKPSQSA 1793
Query: 202 REPAQVW---LQFNSPVL-QDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDG 257
+ L NSP Q + L + + + + + R+ S+ D
Sbjct: 1794 VAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNIL-------------RVLASDPDA 1840
Query: 258 EMEGRIVFALEKETEREKFKIRDENPWITV 287
GR+ +++ F+I ITV
Sbjct: 1841 GANGRVTYSIISGNHGNAFRIDSTTGRITV 1870
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 30/190 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYS T GN NH F L ++ +GV+ V S +D E+ + Y+L ++ TD
Sbjct: 911 LRYSFTSGNTNHAFTL------------DAVTGVVTV-SRSLDFEQRSSYALGLSVTDRG 957
Query: 88 GINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+T H+ ++V D NDN PVFS Y +S + N + + VSATD
Sbjct: 958 SPPLTDTSHLLINVNDINDNPPVFSPSAY-------QSRVKENTPAGTQ---VIQVSATD 1007
Query: 147 ADGD---KVAYKLAVPSN--LVVIVPQTGELLLTGDPPSDD-VEYELTVEAHDLQSPSRY 200
D + + + ++ + I TG + + P ++ Y+LTV+A D P +Y
Sbjct: 1008 RDSSTNGALVFGIIKGNDDGVFTIDGSTGIISIAKSPDYENKTRYDLTVQARDRGVPVKY 1067
Query: 201 AREPAQVWLQ 210
++++
Sbjct: 1068 DTAQVTIFIE 1077
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 32/193 (16%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ V Y+I GN ++F L + +SG+L V S +DRE + Y+LV+ A
Sbjct: 1428 PNGAVTYAIISGNQGNSFQL------------DPRSGILSVRS-TLDRETIPSYTLVVKA 1474
Query: 84 TDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
+D ++ T + V VLD NDN+P F + ++ G+++ + + S++ V
Sbjct: 1475 SDAGSPQQSITASIHVSVLDVNDNAPRFEKSLFS---GEIREDASVH-------STVLQV 1524
Query: 143 SATDAD-GDKVAYKLAVPSNLV--VIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQS 196
D D G A L++ + TG +L P D Y+LTV A D S
Sbjct: 1525 KVEDKDEGSNGAITLSLSGEGSDNFTIDSTGFVL--SKTPLDYETTAAYQLTVTARDGGS 1582
Query: 197 PSRYAREPAQVWL 209
PS+ A ++ +
Sbjct: 1583 PSKSATAQVKITI 1595
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 77/178 (43%), Gaps = 33/178 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN+N FA+ T + T +DRE +A YSL I A D
Sbjct: 1328 ISYSILSGNENMAFAMDRFTGE-------------ITTRVPLDRETIASYSLTINADDGS 1374
Query: 88 GIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVSAT 145
+ A T V + + DENDN P F+ RF N+S + +G ++AT
Sbjct: 1375 LVRFMAATTVNISIADENDNQPTFTGP-SRF-----------NISEDSPTGTRVGQLTAT 1422
Query: 146 DAD-GDKVAYKLAVPS----NLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSP 197
D D G A A+ S N + P++G L + + + Y L V+A D SP
Sbjct: 1423 DRDIGPNGAVTYAIISGNQGNSFQLDPRSGILSVRSTLDRETIPSYTLVVKASDAGSP 1480
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 87/182 (47%), Gaps = 31/182 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P + Y + GN F + ++ SG + V+S ++DRE YSL + A
Sbjct: 1117 PRGRLEYRLISGNVKGAFNI------------DANSGSIRVSS-ELDRETTPSYSLQVEA 1163
Query: 84 TDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
D +++ + VT+ + D NDNSP+F Q Y F V S +S+ H IG V
Sbjct: 1164 RDGGSTSRSSSTRVTIALQDINDNSPIF-QGPYVFRV-----SESSSPGH-----QIGQV 1212
Query: 143 SATDAD----GDKVAYKLAVPSNLVVIVPQTGELLL-TGDPPSDDVEYELTVEAHDLQSP 197
+ATDAD GD V Y L+ +++ I TG + L T +Y +TV A D +P
Sbjct: 1213 AATDADDSSNGD-VRYALSDNTDVFSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTP 1271
Query: 198 SR 199
SR
Sbjct: 1272 SR 1273
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 18/112 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +G+ + L +L + + V YSI GN + F + +S +G
Sbjct: 1822 ENTANGSNI--LRVLASDPDAGANGRVTYSIISGNHGNAFRI------------DSTTGR 1867
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFS 111
+ V G +DRE +A Y+L I+A D G+ + V + V DENDNSP+F+
Sbjct: 1868 ITVV-GVVDREALASYNLTISAKD-SGVPPWVSTAFVAITVADENDNSPIFA 1917
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 57/110 (51%), Gaps = 18/110 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS + T V + V++S + + YSI G D+ F++ + +SG+
Sbjct: 2133 ENSPTSTSV----VKVSASDRDSFGSLSYSIVGGKDSDKFSI------------DQRSGI 2176
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVF 110
+ T+ +DRE V+ Y++ + TD + T VT+ +LDENDNSP F
Sbjct: 2177 I-STADVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKF 2225
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 64/143 (44%), Gaps = 17/143 (11%)
Query: 62 LLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
L+ T +DRE+ A YSL +TA D K A +T+ + D NDNSP FSQ Y V
Sbjct: 1762 LVTTKRPLDREDQASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKYTLTVT 1821
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPS--NLVVIVPQTGELLLT 175
+ + S+I V A+D D +V Y + + N I TG + +
Sbjct: 1822 E----------NTANGSNILRVLASDPDAGANGRVTYSIISGNHGNAFRIDSTTGRITVV 1871
Query: 176 GDPPSDDV-EYELTVEAHDLQSP 197
G + + Y LT+ A D P
Sbjct: 1872 GVVDREALASYNLTISAKDSGVP 1894
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 56/121 (46%), Gaps = 22/121 (18%)
Query: 65 TSGDI------DREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVYR 116
T+GDI DRE+ A Y+L I D KG + V +DV+DE+DN P F Y
Sbjct: 2483 TTGDISTKVPLDREQQAVYTLRIGVAD-KGNPSLSSVADVIIDVIDEDDNCPRFQPTEYN 2541
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELL 173
+ + + +SI V+A D DGDK A K PS I +TG ++
Sbjct: 2542 VTISE----------SLPRGASIVQVTARDIDGDKDTSYAIKSMTPSGGFTIDSKTGVVM 2591
Query: 174 L 174
+
Sbjct: 2592 V 2592
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 13/162 (8%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE + Y LV+ A+D I A +TVD D NDN+P F+ VY K+ +
Sbjct: 734 LDREAKSAYDLVVEASDGNIIAIAALKITVD--DVNDNAPFFALSVY-------KTGVYE 784
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD-DVEYEL 187
+V+ + +V +++Y L V G + G + Y++
Sbjct: 785 DVAVGSIVRQLTAVDLDVGINARLSYSLVSGDTSYFTVDSQGVIRTKGAFDRETKASYQV 844
Query: 188 TVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQMID 226
+ A D SPSR + ++ + N PV Q +D
Sbjct: 845 ALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQYTASVD 886
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 31/191 (16%)
Query: 17 VASSHKHPHQLVRYSITQGNDNHT----FALKNPT-THEIRNSTESKSGVLLVTSGDIDR 71
V+ S HQ+ + + T +D+ +AL + T I ST L+ +D
Sbjct: 1199 VSESSSPGHQIGQVAATDADDSSNGDVRYALSDNTDVFSINTSTG-----LITLKTQLDY 1253
Query: 72 EEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
E+ QY + +TA D +++ T V V V D NDN P F++ +Y VG+ +L + V
Sbjct: 1254 EKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGE---NLAAGV 1310
Query: 131 SHWKKFSSIGSVSATDADG---DKVAYK-LAVPSNLVVIVPQ-TGELLLTGDPPSDD--- 182
++ V+ATDAD K++Y L+ N+ + + TGE +T P D
Sbjct: 1311 -------AVCYVTATDADSGANGKISYSILSGNENMAFAMDRFTGE--ITTRVPLDRETI 1361
Query: 183 VEYELTVEAHD 193
Y LT+ A D
Sbjct: 1362 ASYSLTINADD 1372
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 27/123 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI +G D FA+ + +GVL V +I+RE V Y+L I A+D +
Sbjct: 1951 VFYSIVRG-DTSAFAIN------------AMNGVLTVKK-EINRETVPTYTLTIRASD-R 1995
Query: 88 G--INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G + ++ +TV V D NDN PVF+ + Y +G ++ + + +S+ +V+A
Sbjct: 1996 GSPMMTSDKELTVVVNDVNDNPPVFNSQSY---IGSVR-------ENSAQSTSVLTVAAD 2045
Query: 146 DAD 148
D+D
Sbjct: 2046 DSD 2048
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 22/111 (19%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA----------- 83
G+ + ++A+K+ T + +SK+GV++V S +DRE + LVI A
Sbjct: 2564 GDKDTSYAIKSMTPSG-GFTIDSKTGVVMVASSGVDREIADVFKLVIRAGKEHCGATNDT 2622
Query: 84 -----TDVKGINKAE-----THVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
G+ +A VT+ V D NDN+P FS+ Y + D+ +
Sbjct: 2623 GGGEGGRFLGVQQATYPDSLATVTIQVTDVNDNAPSFSRDSYEYDFNDVTT 2673
>gi|410973091|ref|XP_003992989.1| PREDICTED: protocadherin-16 [Felis catus]
Length = 3298
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+ G L +G +D E+ +Y L + A D G ++ ++TV V D NDN+P FSQ +Y+
Sbjct: 2325 RYGGRLSLTGPLDFEQRDRYHLQLLAHD--GPHEGHANLTVFVEDVNDNAPAFSQSLYQV 2382
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLL 174
+ + H S+I SVSATD D ++Y LA P+ + P G L
Sbjct: 2383 TL----------LEHTPPGSAILSVSATDQDSGANGHISYHLASPAEGFSVDPNNGTLFT 2432
Query: 175 TGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWLQ 210
T + E ++ +EA D P R AR V LQ
Sbjct: 2433 TVGTMALGHEGPGVVDVVLEARDHGMPGRAARATVHVQLQ 2472
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV-LLVTSGDIDREEVAQYSLVITA 83
H V YSI GN F L+ + LV +D E + QY+L + A
Sbjct: 2514 HATVDYSIVSGNRGRVFQLEPRLAEAGEGGGLGPRALGCLVLLESLDFESLTQYNLTVAA 2573
Query: 84 TD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
D + + VTV VLD NDN PVF+Q YR V
Sbjct: 2574 ADRGQPPRSSAVPVTVTVLDVNDNPPVFTQASYRMAV 2610
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 25/146 (17%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
GV+ L + + + PH LVR++++ G+ + F L + SG L +
Sbjct: 2617 GVELLHVEASDADPGPHGLVRFTLSSGDPSGLFEL------------DESSGALRLAH-P 2663
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D E +++ LV+ A D G + A VT++V D ND+ PVF + L +SL
Sbjct: 2664 LDCETQSRHQLVVQAADPAGTHFALAPVTIEVQDVNDHGPVFPLSL-------LSTSLAE 2716
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAY 154
N +++ ++ DGD A+
Sbjct: 2717 NQPPGTLVTTLHAI-----DGDAGAF 2737
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 83/202 (41%), Gaps = 20/202 (9%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V + P+ + YS+ Q +++ +P T E
Sbjct: 1115 ENQPPGTSVGR--VFATDRDSGPNGRLTYSLRQLSEDSKAFRIHPQTGE----------- 1161
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
+ T +DRE + Y L++ D ++ T V + VLD NDNSP F Q G
Sbjct: 1162 -MTTLQTLDRERQSSYQLLVQVQDGGNPPRSTTGTVHIAVLDLNDNSPTFLQ-ASGAAGG 1219
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGELLLTGDP- 178
L + V +++ + + + + Y L P S L + P GE LLT P
Sbjct: 1220 GLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFSLHPHLGE-LLTAAPL 1278
Query: 179 -PSDDVEYELTVEAHDLQSPSR 199
++ Y LT+ AHD SP R
Sbjct: 1279 IRAERPHYVLTLSAHDQGSPPR 1300
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 103/270 (38%), Gaps = 47/270 (17%)
Query: 43 LKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDV 100
L P++ E+R +T +DRE+ Y+ ++A D T VT+ V
Sbjct: 1902 LLEPSSGELRTATV------------LDREQCPSYAFSVSAVDGAAAGPLSTTVPVTITV 1949
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA 157
D ND++P F R + SL++ + ++ A D D + Y+LA
Sbjct: 1950 RDVNDHAPTFPTSPLRLRLPRPGPSLSTPT------LPLATLRAEDRDAGANASILYRLA 2003
Query: 158 -VPSNLVVIVPQTGELLLTGDP----PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFN 212
P + TGE+ + P P D V L + A DL P+R A V LQ
Sbjct: 2004 GTPPPGTTVDSYTGEIRVARSPVALGPRDRV---LFIVATDLGRPARSATGVVIVGLQGE 2060
Query: 213 SPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETE 272
S E+ + SEA R T V P + G G I +++ E
Sbjct: 2061 S-----ERGPRFPRASSEAMLRENAPPGTPIVSPK-----AVHAGGSNGPITYSILSGNE 2110
Query: 273 REKFKIRDENPWITVDENGDVRVKKRWDFE 302
R F I+ IT VR + DFE
Sbjct: 2111 RGTFSIQPSTGAIT------VRSAEGLDFE 2134
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 405 EGGEGH-FAL----------STQDSVIYLVCVARQLDREERDAYNLRVTATDSGSPPLRA 453
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + V D NDN+P F +++YR
Sbjct: 454 EATFVLHVTDVNDNAPTFDRQLYR 477
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ TF L E R + LV +G++DRE + Y L + A D
Sbjct: 179 YALSGDGAGETFQL------ETRPGPDGAPVPELVVTGELDRENRSHYMLQLEAYDGGSP 232
Query: 90 -NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+A+ + V +LD ND++P F+Q Y +V
Sbjct: 233 PRRAQALLDVTLLDINDHAPAFNQSRYHAVV 263
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y + G D + F L S +G L V +DRE+ A++ L + A+D
Sbjct: 1579 VSYRLAAGGDGY-FRL------------HSSTGALSVVR-SLDREQRAEHVLTVVASDHG 1624
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIV 119
++ T + TV V D ND +P F Q+ Y ++
Sbjct: 1625 SPPRSATQLLTVSVADVNDEAPAFQQQEYSVLL 1657
>gi|359067597|ref|XP_003586360.1| PREDICTED: protocadherin beta-17 [Bos taurus]
gi|296485246|tpg|DAA27361.1| TPA: protocadherin beta 17-like isoform 1 [Bos taurus]
Length = 797
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 77/159 (48%), Gaps = 22/159 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DREE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTEGALDREEKAEYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPTFTQTSYTLWVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYK-------LAVPSNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L ++LV I P G
Sbjct: 463 ----NNSPALH------IGSVSATDTDAGANAQVTYSLLPPPDPLVPLASLVSINPDNGH 512
Query: 172 LL-LTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL 209
L LT +E V A D SP+ ++ +V +
Sbjct: 513 LFALTSLDYEALRAFEFRVGATDRGSPALSSQALVRVLV 551
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 26/195 (13%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE-------IRNSTESKSGVLLVTSG 67
+L S HP I Q D + ++N T RN ++ + LV
Sbjct: 139 LLKISESSHPGSAYPLKIAQDLDVGSNTVQNYTISSNFHFHLFTRNHSDGRKYPELVLDQ 198
Query: 68 DIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
++DREE + L +TA D K T V + VLD NDN+P F+Q++Y+ V +
Sbjct: 199 ELDREEQPELRLTLTAMDGGSPPKTGTSQVLIIVLDINDNAPEFAQQLYQVQVPE----- 253
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVV----IVPQTGELLLTGDPP 179
NS + S + +VSA D D +++Y SN V+ + TG++ L
Sbjct: 254 NSPIG-----SLVITVSARDLDAGIHGELSYSFFQSSNQVIQAFEVNTATGDIRLKKKLD 308
Query: 180 SDDV-EYELTVEAHD 193
+++ Y + +EA D
Sbjct: 309 FEEIRSYHMEIEASD 323
>gi|345788489|ref|XP_853733.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Canis lupus
familiaris]
Length = 3295
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+ G L +G +D E+ +Y L + A D G ++ ++TV V D NDN+P FSQ +Y+
Sbjct: 2323 RYGGRLSLTGPLDFEQRDRYHLQLLAHD--GPHEGHANLTVFVEDVNDNAPAFSQSLYQV 2380
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLL 174
+ + H S+I SVSATD D ++Y LA P+ + P G L
Sbjct: 2381 TL----------LEHTPPGSAILSVSATDQDSGANGHISYHLASPAEGFSVDPNNGTLFT 2430
Query: 175 TGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWLQ 210
T + E ++ +EA D P R AR V LQ
Sbjct: 2431 TVGTVALGHEGPGVVDVVLEARDHGMPGRAARATVHVQLQ 2470
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 111/281 (39%), Gaps = 56/281 (19%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL-------LVTSGDIDREEVAQY 77
H V YSI GN F L E R + + G L LV +D E + QY
Sbjct: 2512 HATVDYSIVSGNRGRVFQL------EPRLAETGEGGGLGPRALGCLVLLESLDFESLTQY 2565
Query: 78 SLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKF 136
+L + A D + + VTV VLD NDN PVF++ YR V + + + + + H
Sbjct: 2566 NLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRMAVPE-DTPVGAELLH---- 2620
Query: 137 SSIGSVSATDADGDK---VAYKLAV--PSNLVVIVPQTGELLLTGDPPSD---DVEYELT 188
V A+DAD V + L+ PS L + +G L L P D ++L
Sbjct: 2621 -----VEASDADPGPHGLVRFTLSSGDPSGLFELDENSGALRLAR--PLDCETQARHQLV 2673
Query: 189 VEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQL----------------LQMIDRKS 229
V+A D + +A P + +Q + PV L L ID +
Sbjct: 2674 VQAADPAG-AHFALAPVTIEVQDVNDHGPVFPLSLLSTSLAENQPPGTLVTTLHAIDGDA 2732
Query: 230 EAPHRIEKRRVTRAVRPTKRIDFS--ETDGEMEGRIVFALE 268
A R+ + P R F+ + GE+ R+ F E
Sbjct: 2733 GAFGRLRYTLLEAGPGPEGREAFALNSSTGELRARVAFDYE 2773
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 25/131 (19%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LVR++++ G+ + F L + SG L + +D E A++ LV+ A
Sbjct: 2630 PHGLVRFTLSSGDPSGLFEL------------DENSGALRLAR-PLDCETQARHQLVVQA 2676
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G + A VT++V D ND+ PVF + L +SL N +++ ++
Sbjct: 2677 ADPAGAHFALAPVTIEVQDVNDHGPVFPLSL-------LSTSLAENQPPGTLVTTLHAI- 2728
Query: 144 ATDADGDKVAY 154
DGD A+
Sbjct: 2729 ----DGDAGAF 2735
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 6/135 (4%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE + Y L++ D ++ T V + VLD NDNSP F Q G L +
Sbjct: 1166 LDRERQSSYQLLVQVQDGGSPPRSTTGTVHIAVLDLNDNSPSFLQ-ASGAAGGGLPVQVP 1224
Query: 128 SNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGELLLTGDP--PSDDVE 184
V +++ + + + + Y L P S L + P +GE LLT P ++
Sbjct: 1225 DRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGE-LLTAAPLIRAERPH 1283
Query: 185 YELTVEAHDLQSPSR 199
Y LT+ AHD SP R
Sbjct: 1284 YVLTLSAHDQGSPPR 1298
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 95/235 (40%), Gaps = 29/235 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIVG 120
L T+ +DRE+ + Y+ ++A D T VT+ V D ND++P F R +
Sbjct: 1908 LRTAIALDREQCSSYAFSVSAVDGAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLP 1967
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA-VPSNLVVIVPQTGELLLTG 176
SL++ ++ ++ A D D + Y+LA P + TGE+ +
Sbjct: 1968 RPGPSLSTPT------LALATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVAR 2021
Query: 177 DP----PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
P P D V L V A DL P+R A V LQ S E+ + SEA
Sbjct: 2022 SPVALGPRDRV---LFVVATDLGRPARSATGVVIVGLQGES-----ERGPRFPRATSEAM 2073
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
R T + P + G G I++++ E+ F I+ ITV
Sbjct: 2074 LRENAPPGTPIISPK-----AVHAGGSNGPIIYSILSGNEKGTFSIQPSTGAITV 2123
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 403 EGGEGH-FAL----------STQDSVIYLVCVARQLDREERDAYNLRVTATDSGSPPLRA 451
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + V D NDN+P F +++YR
Sbjct: 452 EATFVLHVTDVNDNAPTFDRQLYR 475
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ TF L E R + LV +G++DRE + Y L + A D
Sbjct: 177 YALSGDGAGETFRL------ETRPGPDGTPVPELVVTGELDRENRSHYMLQLEAYDGGSP 230
Query: 90 -NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+A+ + V +LD ND++P F+Q Y +V
Sbjct: 231 PRRAQALLDVTLLDINDHAPAFNQSRYHAVV 261
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y + G D + F L S +G L V +DRE+ A++ L + A+D
Sbjct: 1577 VSYRLAAGGDGY-FRL------------HSGTGALSVVR-SLDREQRAEHLLTVVASDHG 1622
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIV 119
++ T + TV V D ND +P F Q+ Y ++
Sbjct: 1623 SPPRSATQLLTVSVADVNDEAPAFQQQEYSVLL 1655
>gi|363746677|ref|XP_003643757.1| PREDICTED: protocadherin alpha-2-like, partial [Gallus gallus]
Length = 364
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 112/244 (45%), Gaps = 51/244 (20%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET---HVTVDVLDENDNSPVFSQKVYRFIV 119
LV + +DRE ++++ LV+TA+D G A T + + VLD NDN+P F+Q VY+ +
Sbjct: 88 LVLTHPLDRESLSEHRLVLTASD--GGRPALTGTVQLVISVLDANDNAPQFNQSVYKVQL 145
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA--VPSN---LVVIVPQTGE 171
+ + + + V+ATD D +V+Y + +P N L+ + PQ GE
Sbjct: 146 PE----------DAAEGTLVARVTATDPDEGINSEVSYSASNFIPLNGKDLISVHPQNGE 195
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSP--SRYAR----------EPAQVWL-QFNSPVLQ 217
+ LTG ++V ++ +EA D +P S + R +VW+ + PV +
Sbjct: 196 IRLTGPLDFEEVSVFDFRIEARDKGTPPLSGHCRVEVEVLDVNDNAPEVWVTSLSVPVPE 255
Query: 218 DE------QLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKET 271
D LL + DR S P+ RV AVRP T G L +
Sbjct: 256 DAALGTVVALLSVSDRDS-GPN----GRVRCAVRPPSPFGLVAT---FAGSYSLVLREAL 307
Query: 272 EREK 275
+RE+
Sbjct: 308 DRER 311
>gi|340375320|ref|XP_003386184.1| PREDICTED: hypothetical protein LOC100636493 [Amphimedon
queenslandica]
Length = 7134
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 14/127 (11%)
Query: 32 ITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK 91
ITQ N + ++L + ++ + ES L+ TSG +D E + QY+L + A D
Sbjct: 2919 ITQINSDIMYSLISSDSYPFNINNESG---LITTSGPLDSETIDQYTLTVVAMDTGEPPL 2975
Query: 92 AET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD 150
T +V+V +L+ NDN P+F+Q Y F + + + S+IG + ATD D D
Sbjct: 2976 FSTVNVSVLILNTNDNRPIFTQSSYHFNI----------LENQPNGSTIGHIIATDVDLD 3025
Query: 151 KVAYKLA 157
+ Y+L
Sbjct: 3026 NITYELG 3032
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 127/298 (42%), Gaps = 48/298 (16%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK-AET 94
N + T+++ N T I +T + TS D E V QY+ ++ D + A +
Sbjct: 1288 NADLTYSIINSTQFSINPNTG-----WINTSVIFDYESVNQYTFTVSVIDSGSPPRDATS 1342
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVA 153
VT+ ++D NDN P+F+Q VY SL N+ S++ V+ATD D GD
Sbjct: 1343 RVTISIIDYNDNQPMFTQSVYSL-------SLFENI---PIGSNLLQVAATDDDSGDNAM 1392
Query: 154 YKLAV---PSNLVVIVPQTGELLLTGDPPSDDV--EYELTVEAHDLQSPSRYAREPAQVW 208
+ + PS++ I +TG L G +++ E+ LT+ A++ SP Y+ + +
Sbjct: 1393 IEYLLIDGPSHVFGISNETGVLYTHGFVNREELGAEFNLTILANNSLSP-VYSSSTSIID 1451
Query: 209 LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALE 268
+ N D+ L P + + P S+ D G I ++L
Sbjct: 1452 IFIND--FNDQSPLFNSTIVRYIPEDTPPGSIVYTLDP------SDGDAGDNGTISYSL- 1502
Query: 269 KETEREKFKIRDENPWITVDEN-GDVRVKKRWDFEELGPEKTIDFWVTINNQATNGGP 325
D N ++E+ G++ + D+E GP + F+ I N + NG P
Sbjct: 1503 ----------VDGNAAFQLNESTGEIILSSYVDYE--GPLR---FYYMIVNASDNGNP 1545
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 30/172 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y+I+ G+ ++F + + +G L++TS ++DRE +L I+A D +
Sbjct: 302 IYYTISSGDVTNSFTVN------------ATTGSLVLTS-ELDREAGNPLALTISAID-R 347
Query: 88 GINKAETHVTVDV--LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G+ +TV V LD NDN P+FS +Y+ + +SS + +G+++A
Sbjct: 348 GLPPLSDTITVTVHLLDVNDNPPLFSTSLYQLDIS--ESSPTGQL--------VGTIAAV 397
Query: 146 DADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHD 193
D D + V Y + ++ ++ TG L+ + + +Y LTVEAHD
Sbjct: 398 DPDSGENGTVYYNIISNTSSFILDNATGALITAVPLDRESIPQYSLTVEAHD 449
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 14/115 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+ T+G +DRE + QY L++ A D I + + V + + D ND SPVF+Q +Y G
Sbjct: 2508 IFTAGSLDREFIDQYVLLVYAYDGGSPILSSSSCVFITITDTNDQSPVFNQSLY---TGQ 2564
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELL 173
L V + + I V A+D D +++Y LA S+ + P TG ++
Sbjct: 2565 L-------VENTATGAVILRVEASDDDIGANSEISYSLATGSDTFTVHPLTGVIM 2612
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 41 FALKNPTTHEIRNST-ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVD 99
F L N T + + T E KS LV G++D E +++Y L I + V NK +T+
Sbjct: 3658 FILPNSTRSAVFDDTFELKSNGSLVLIGNVDYERLSRYVLNIESESVSTGNKVYVILTLS 3717
Query: 100 VLDENDNSPVFSQKVYRFIVGD 121
++D NDN P FS Y+ ++ +
Sbjct: 3718 IIDVNDNPPYFSSDQYQLLISE 3739
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 16/91 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
++Y I GN +++F + +P T L DID E + YSLVI ATD
Sbjct: 2234 IQYYIVSGNVDNSFRI-DPNTGS------------LTLIRDIDYEYINYYSLVIGATDSG 2280
Query: 88 GIN---KAETHVTVDVLDENDNSPVFSQKVY 115
I+ ET V++ V+D NDN P+F Q Y
Sbjct: 2281 HISIRLTNETTVSISVIDVNDNPPIFDQDQY 2311
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 16/96 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSIT GND + F + N ++ EI T+ DIDRE++ ++L ++A+D
Sbjct: 2129 ITYSITAGNDLNVFYI-NTSSGEI------------FTNADIDREDIDLFNLTVSASD-N 2174
Query: 88 GINK--AETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+N + + VLD N+ P F Q Y V +
Sbjct: 2175 SVNPLIGSATLLIRVLDINEAPPYFDQDNYSLSVSE 2210
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 15/117 (12%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS G+ V + + S + + LV YS+ +H F L + T
Sbjct: 1160 LENSAPGSSVGFIEAIDPDSPGN-NSLVTYSLLLDYTDHHFFLNSSTGQ----------- 1207
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYR 116
+ T +REE Y LV+ ATD + T V +++ D ND+ PVFSQ Y
Sbjct: 1208 --ITTLATFNREERDLYDLVVMATDSGDPQLSSTATVFIEISDSNDHDPVFSQNQYN 1262
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 14/84 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI GN+ F++ NP T I S ++D + V Y+L + ATD
Sbjct: 197 VIYSIINGNELSHFSI-NPDTGWIS------------VSANLDVDSVDFYNLTLLATDGG 243
Query: 88 GINKAETHVTVDVLDENDNSPVFS 111
G+N + V +LD NDN PV +
Sbjct: 244 GLNDTAV-LLVTILDSNDNPPVIT 266
>gi|444713177|gb|ELW54085.1| Protocadherin beta-4 [Tupaia chinensis]
Length = 768
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 102/225 (45%), Gaps = 47/225 (20%)
Query: 37 DNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH- 95
DN F LK PT K+ LVT +DRE A+Y++ IT TD+ H
Sbjct: 386 DNLPFILK-PTF---------KNFYTLVTERPLDRESQAEYNITITVTDLGTPRLTTEHS 435
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KV 152
+TV V D NDN+P F+Q Y +V + NS H IG++SATDAD +V
Sbjct: 436 ITVLVSDVNDNAPAFTQASYTLLVRE----NNSPALH------IGTISATDADAGTNAQV 485
Query: 153 AYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSPSRYA 201
Y L P ++LV I G+L S D E +E V A D SP+ +
Sbjct: 486 TYSLLPPHDPQLALASLVSINADNGQLFALR---SLDYEALRAFEFGVRAADRGSPALSS 542
Query: 202 REPAQVWL---QFNSP-VLQDEQ-----LLQMIDRKSEAPHRIEK 237
+ +V + N+P VL Q +++ R +EA + + K
Sbjct: 543 QALVRVLVLDANDNAPFVLYPLQNGSAPCTELVPRAAEAGYLVTK 587
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 52 RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVF 110
RN +E K LV +DREE A++SL + A D ++ T V + V+D NDN+P F
Sbjct: 182 RNHSEGKKYPDLVQDKALDREEQAEFSLTLMALDGGSPPRSGTVMVRILVMDVNDNAPEF 241
Query: 111 SQKVY 115
Y
Sbjct: 242 VHTPY 246
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 62/134 (46%), Gaps = 16/134 (11%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D E++ Y + I ATD G++ T V ++V+D NDN+P + L +S+
Sbjct: 306 LDFEKIKSYRVEIEATDGGGLSGKGT-VVIEVVDVNDNAP-------ELTISSLTNSIPE 357
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGE--LLLTGDPPSD---DV 183
N + SI + D+ GD ++P NL I+ T + L + P D
Sbjct: 358 NAP--ETVVSIFRIRDKDS-GDNGKMICSIPDNLPFILKPTFKNFYTLVTERPLDRESQA 414
Query: 184 EYELTVEAHDLQSP 197
EY +T+ DL +P
Sbjct: 415 EYNITITVTDLGTP 428
>gi|327270365|ref|XP_003219960.1| PREDICTED: protocadherin gamma-B2-like [Anolis carolinensis]
Length = 763
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 93/198 (46%), Gaps = 34/198 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIVG 120
L+T G +DRE+ ++Y++ ITATD KG TH +TV + D NDNSP F + Y V
Sbjct: 406 LLTDGPLDREKNSEYNITITATD-KGTPSLSTHKSITVHISDINDNSPTFEESTYHVFVS 464
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA------VP-SNLVVIVPQTG 170
+ S +SI ++ A+D D D ++ Y + +P S+ V I +TG
Sbjct: 465 ENNPS----------GASIYTIKASDPDLDRNARITYSILNSNIDELPLSSFVSINSETG 514
Query: 171 ELLLTGDPPSDDV-EYELTVEAHDLQSPSRYAREPAQVWL---QFNSPVL-------QDE 219
+ + E+ + V+A D SPS + QV++ NSP +
Sbjct: 515 TIYAQRSFDYEQFREFHIQVKAQDGGSPSLSSSVTVQVFILDQNDNSPRILYPLLDTDGS 574
Query: 220 QLLQMIDRKSEAPHRIEK 237
L +M+ R SE + + K
Sbjct: 575 ALFEMVPRSSELGYLVTK 592
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 19/106 (17%)
Query: 48 THEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDN 106
T +++ S + +L+ +DRE L++TA D K T + +++ D NDN
Sbjct: 181 TLDVKESPDGNKYPVLIQRKSLDRESEHSLHLILTALDGGEPFKTGTAQIWINITDANDN 240
Query: 107 SPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS----VSATDAD 148
P+F+Q+ YR S K+ + IGS V+ATDAD
Sbjct: 241 PPIFTQETYR--------------SSLKETTPIGSLVTQVTATDAD 272
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 74/156 (47%), Gaps = 22/156 (14%)
Query: 51 IRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVF 110
++ S + +SG++ + +D EE Y +++ A D G+ A V VDVLDENDN P
Sbjct: 292 LKFSLDPESGIISIRE-PLDFEESTSYMMLVEAKDGGGL-LAHCKVEVDVLDENDNDPEI 349
Query: 111 S-QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL---VVI 165
S V+ I D SL V I +S D D G+ ++ +NL ++
Sbjct: 350 SLTSVFSPIPED---SLPGTV--------IALISVADRDEGESGKTACSIQNNLPFKILS 398
Query: 166 VPQTGELLLTGDPPSD---DVEYELTVEAHDLQSPS 198
T LLT D P D + EY +T+ A D +PS
Sbjct: 399 SSSTYYKLLT-DGPLDREKNSEYNITITATDKGTPS 433
>gi|344265172|ref|XP_003404660.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Loxodonta
africana]
Length = 4345
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 25/204 (12%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G PIL+ S+ + V Y + +GN N F++ S SG L+ T +D
Sbjct: 1668 GSPILLVSATSYSE--VTYELREGNKNGVFSMN------------SYSG-LISTQKSLDH 1712
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E+++ Y L I +++ G + + V V ++DENDN+P F + + VG + + +
Sbjct: 1713 EKISSYQLKIRGSNMAGAS-TDVMVLVYIIDENDNAPKFLKPTF---VGQISEAAPLHSM 1768
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EY 185
+ +S + A D+D + + YK+ P L I P G L + + + + +
Sbjct: 1769 VMDENNSPFVIHAIDSDKEANSLLVYKILDPEALKFFKIDPSMGTLTIVSEMDYESMPSF 1828
Query: 186 ELTVEAHDLQSPSRYAREPAQVWL 209
+ +V HD +P +A PAQV +
Sbjct: 1829 QFSVYVHDQGNPILFAPRPAQVII 1852
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 82/170 (48%), Gaps = 30/170 (17%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN+ F + E ++G+L V S +D E + Y L IT D+
Sbjct: 744 YVIADGNEEGCFDI------------ELETGLLSV-SAPLDYEATSFYILNITVYDLGTP 790
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K+ +TV+V+D NDN+P F Y+ + + ++ V S+I + A DAD
Sbjct: 791 PKSSWKLLTVNVIDWNDNAPRFPPGGYQVTISE-----DAEVG-----STIAELKAKDAD 840
Query: 149 GD---KVAYKLAVPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEAHD 193
+ +V Y L P+ + P TGEL++TG D S+ +Y L VEA D
Sbjct: 841 SEDNGRVRYTLLSPTEKFSLHPLTGELVVTGHLDRESES-QYILKVEARD 889
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 28/162 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLV 80
P +V+Y I G+ + F + +R T+S + LL +RE Y+L+
Sbjct: 65 PQWIVKYRIISGDVANVFKTEEYMVGNFCFLRIRTKSSNTALL------NREVQDSYTLI 118
Query: 81 ITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD---LKSSLNSNVSHWKKFS 137
I AT+ +A T V V +LD+ND P+FS Y+ + + LK S
Sbjct: 119 IQATEKTLELEALTRVVVHILDQNDLKPLFSPPSYKVTISEDMPLK-------------S 165
Query: 138 SIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTG 176
I V+ATDAD + A Y S + I P +G + + G
Sbjct: 166 PICKVTATDADLGQNAEFYYSFNTKSEMFAIHPTSGVVTVAG 207
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 54/108 (50%), Gaps = 16/108 (14%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE A+Y L +TA+D G +A V + VLD NDNSP SQ +Y V + +
Sbjct: 2966 LDRELTAKYLLSVTASD--GKFQASVPVEIFVLDINDNSPQCSQLLYAGKVSEAVAP--- 3020
Query: 129 NVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-SNLVVIVPQTGEL 172
H+ + VSA D D D ++ Y L P S + P TGEL
Sbjct: 3021 --GHF-----VLKVSAIDLDTDTNAQITYSLHGPGSEEFKLDPYTGEL 3061
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
+T+ K+GVL VT G +D E ++ + ATD + +E V V V D NDN P FSQ
Sbjct: 2209 NTDFKTGVLTVT-GPLDYESKTKHIFTVRATDTALGSFSEATVEVLVEDINDNPPTFSQL 2267
Query: 114 VY 115
VY
Sbjct: 2268 VY 2269
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 54/123 (43%), Gaps = 31/123 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-V 86
+ ++IT GN F + +P T LL T+ +DRE ++ L +T D
Sbjct: 1164 LTFNITSGNHMGFFVI-HPLTG------------LLSTARKLDRENKDEHILEVTVLDNG 1210
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQK-----------------VYRFIVGDLKSSLNSN 129
+ K+ + V V VLD NDN PVFS K VYR + DL LN
Sbjct: 1211 EPPLKSTSRVVVRVLDVNDNPPVFSHKLFNVRLPERLNLATPGPVYRLVASDLDEGLNGR 1270
Query: 130 VSH 132
V++
Sbjct: 1271 VTY 1273
>gi|149017293|gb|EDL76344.1| rCG49391 [Rattus norvegicus]
Length = 621
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 14/101 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT +D+ H +TV V+D NDN+PVF+Q Y V +
Sbjct: 402 LVTEGPLDRESRAEYNITITVSDLGTPRLTTQHTITVQVMDINDNAPVFTQTSYTMFVHE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVP 159
NS H IG++SATD+D + Y L P
Sbjct: 462 ----NNSPALH------IGTISATDSDSGSNAHITYSLLPP 492
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + +L++TA D K+ T V ++V+D NDN+P F + +Y V +
Sbjct: 194 LVLDRALDREEQPELTLILTALDGGAPPKSGTTTVRIEVVDINDNAPQFVKSLYAVEVPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
S LN+ V +VSA D D VAY L
Sbjct: 254 -DSPLNALVV---------TVSARDLDAGIHGNVAYSL 281
>gi|4406583|gb|AAD20038.1| Similar to protocadherin-3 (pcdh3) [Homo sapiens]
Length = 420
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 73/149 (48%), Gaps = 22/149 (14%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V
Sbjct: 22 ILITEGALDREIRAEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVR 81
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 82 E----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNG 131
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 132 HLFALRSLDYEALQAFEFRVGATDRGSPA 160
>gi|397495187|ref|XP_003818441.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 isoform 2
[Pan paniscus]
Length = 4186
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 80/280 (28%), Positives = 117/280 (41%), Gaps = 53/280 (18%)
Query: 42 ALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDV 100
AL N + E+ S + +SG L+ T+ +DRE + ++ L +TA D A T V V V
Sbjct: 436 ALMNSRSLELF-SIDPQSG-LIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTV 493
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLA 157
D ND+SPVF Q YR +L NV ++ I + ATD D A Y+
Sbjct: 494 ADRNDHSPVFEQAQYR-------ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFV 543
Query: 158 VPSNLVV-------IVPQTGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVW 208
P I P++G + +G + +E YEL VEA D Q P P
Sbjct: 544 GPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSAT 598
Query: 209 LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGR 262
++ + VL D AP EKR V + VRP R+ ++ D + G
Sbjct: 599 VRVHITVL---------DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGL 649
Query: 263 IVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ + + R F I G+++V DFE
Sbjct: 650 VHYNIISGNSRGHFAID--------SLTGEIQVVAPLDFE 681
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 559 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 617
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 618 KRY---VAQVREDV-------RPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDS 667
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 668 LTGEIQVVA--PLDFEAEREYALRIRAQDAGRP 698
Score = 42.0 bits (97), Expect = 0.43, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 30/179 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 1148 ENSIVGSVVA--QITAVDPDEGPNAHIMYQIVEGNIPELFQM------------DIFSGE 1193
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIV 119
L D+D E +Y +V+ AT +++A H+ + +D+NDNSPV + Q ++ V
Sbjct: 1194 LTALI-DLDYEARQEYVIVVQATSAPLVSRATVHIRL--VDQNDNSPVLNNFQILFNNYV 1250
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
+ + S + IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1251 SNRSDTFPSGI--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1301
Score = 41.6 bits (96), Expect = 0.48, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y
Sbjct: 781 SGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHL------- 833
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
LN + + +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 834 RLNEDAA---VGTSVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLD 890
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 891 YKQERYFKLVLTASD 905
Score = 41.6 bits (96), Expect = 0.53, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 1051 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1098
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V+ Y L A D +G+ T V++ V+ D NDN+PVF + + V + NS V
Sbjct: 1099 AVSVYELTAYAVD-RGVPPLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1152
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1153 G-----SVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1207
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 1208 YVIVVQATSAPLVSRATVHIRLVDQNDNSPVLNNFQIL 1245
Score = 41.2 bits (95), Expect = 0.60, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 635 LRVTATDRDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVVA-PLDFE 681
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y+L I A D ++ ++ V+D ND+ P+F ++ V + + L +V
Sbjct: 682 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLE-NAPLGHSV 740
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKLA--VPSNLVVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L P VI TG + ++G + VE Y
Sbjct: 741 IH------IQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYFF 794
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 795 GVEARDHGSP 804
Score = 38.9 bits (89), Expect = 2.9, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 22/177 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKV 114
++ SG + + + +D E+ Y+L ITA D KA+T +V V V D NDN+P F
Sbjct: 977 DADSGAITLQA-PLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASH 1035
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN---LVVIVPQ 168
Y +V + F+S+ +SATD D +V Y + I P
Sbjct: 1036 YTGLVSE----------DAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPT 1085
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQL 221
+G + + V YELT A D P QV +Q N+PV E+
Sbjct: 1086 SGIVRTVRRLDREAVSVYELTAYAVDRGVPPLRTPVSIQVMVQDVNDNAPVFPAEEF 1142
Score = 38.5 bits (88), Expect = 4.1, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ GT V + V + + + + Y IT GN + FA+ ++ GV
Sbjct: 837 EDAAVGTSV----VSVTAVDRDANSAISYQITGGNTRNRFAI------------STQGGV 880
Query: 62 LLVTSG-DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +D ++ + LV+TA+D + ++ +V +++ D N + PVF Y V
Sbjct: 881 GLVTLALPLDYKQERYFKLVLTASD-RALHD-HCYVHINITDANTHRPVFQSAHYSVSVN 938
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPP 179
+ + S+I +SA+D D G+ + NL +T P
Sbjct: 939 EDRPV----------GSTIVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAP 988
Query: 180 ---SDDVEYELTVEAHDLQSPSR 199
D V Y L + A D P +
Sbjct: 989 LDYEDQVTYTLAITARDNGIPQK 1011
>gi|53830059|gb|AAU94938.1| anchor protein [Homo sapiens]
Length = 4186
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 80/280 (28%), Positives = 117/280 (41%), Gaps = 53/280 (18%)
Query: 42 ALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDV 100
AL N + E+ S + +SG L+ T+ +DRE + ++ L +TA D A T V V V
Sbjct: 436 ALMNSRSLELF-SIDPQSG-LIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTV 493
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLA 157
D ND+SPVF Q YR +L NV ++ I + ATD D A Y+
Sbjct: 494 ADRNDHSPVFEQAQYR-------ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFV 543
Query: 158 VPSNLVV-------IVPQTGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVW 208
P I P++G + +G + +E YEL VEA D Q P P
Sbjct: 544 GPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSAT 598
Query: 209 LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGR 262
++ + VL D AP EKR V + VRP R+ ++ D + G
Sbjct: 599 VRVHITVL---------DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGL 649
Query: 263 IVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ + + R F I G+++V DFE
Sbjct: 650 VHYNIISGNSRGHFAID--------SLTGEIQVVAPLDFE 681
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 559 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 617
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 618 KRY---VAQVREDV-------RPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDS 667
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 668 LTGEIQVVA--PLDFEAEREYALRIRAQDAGRP 698
Score = 42.4 bits (98), Expect = 0.31, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 30/179 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 1148 ENSIVGSVVA--QITAVDPDEGPNAHIMYQIVEGNIPELFQM------------DIFSGE 1193
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIV 119
L D+D E +Y +V+ AT +++A HV + +D+NDNSPV + Q ++ V
Sbjct: 1194 LTALI-DLDYEARQEYVIVVQATSAPLVSRATVHVRL--VDQNDNSPVLNNFQILFNNYV 1250
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
+ + S + IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1251 SNRSDTFPSGI--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1301
Score = 41.6 bits (96), Expect = 0.48, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 1051 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1098
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V+ Y L A D +G+ T V++ V+ D NDN+PVF + + V + NS V
Sbjct: 1099 AVSVYELTAYAVD-RGVPPLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1152
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1153 G-----SVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1207
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 1208 YVIVVQATSAPLVSRATVHVRLVDQNDNSPVLNNFQIL 1245
Score = 41.6 bits (96), Expect = 0.48, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y
Sbjct: 781 SGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHL------- 833
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
LN + + +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 834 RLNEDAA---VGTSVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLD 890
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 891 YKQERYFKLVLTASD 905
Score = 41.2 bits (95), Expect = 0.60, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 635 LRVTATDRDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVVA-PLDFE 681
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y+L I A D ++ ++ V+D ND+ P+F ++ V + + L +V
Sbjct: 682 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLE-NAPLGHSV 740
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKLA--VPSNLVVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L P VI TG + ++G + VE Y
Sbjct: 741 IH------IQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYFF 794
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 795 GVEARDHGSP 804
Score = 38.9 bits (89), Expect = 2.9, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 22/177 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKV 114
++ SG + + + +D E+ Y+L ITA D KA+T +V V V D NDN+P F
Sbjct: 977 DADSGAITLQA-PLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASH 1035
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN---LVVIVPQ 168
Y +V + F+S+ +SATD D +V Y + I P
Sbjct: 1036 YTGLVSE----------DAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPT 1085
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQL 221
+G + + V YELT A D P QV +Q N+PV E+
Sbjct: 1086 SGIVRTVRRLDREAVSVYELTAYAVDRGVPPLRTPVSIQVMVQDVNDNAPVFPAEEF 1142
Score = 38.5 bits (88), Expect = 3.8, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ GT V + V + + + + Y IT GN + FA+ ++ GV
Sbjct: 837 EDAAVGTSV----VSVTAVDRDANSAISYQITGGNTRNRFAI------------STQGGV 880
Query: 62 LLVTSG-DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +D ++ + LV+TA+D + ++ +V +++ D N + PVF Y V
Sbjct: 881 GLVTLALPLDYKQERYFKLVLTASD-RALHD-HCYVHINITDANTHRPVFQSAHYSVSVN 938
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPP 179
+ + S+I +SA+D D G+ + NL +T P
Sbjct: 939 EDRP----------MGSTIVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAP 988
Query: 180 ---SDDVEYELTVEAHDLQSPSR 199
D V Y L + A D P +
Sbjct: 989 LDYEDQVTYTLAITARDNGIPQK 1011
>gi|26347037|dbj|BAC37167.1| unnamed protein product [Mus musculus]
Length = 797
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT D+ H +TV V D NDN+P F+Q Y V +
Sbjct: 402 LVTEGPLDRESRAEYNITITVWDLGTPRLTTQHTITVQVSDINDNAPAFTQTSYTLFVQE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVP-------SNLVVIVPQTGE 171
S IG++SATD+D + Y L +P ++L+ I P G+
Sbjct: 462 NNSPA----------LQIGTISATDSDSGSNAHITYSLLLPQDPQLALASLISINPDNGQ 511
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + + ++ +E V A D SP+
Sbjct: 512 LFVLRALDYESLQAFEFRVGATDQGSPA 539
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVT-VDVLDENDNSPVFSQKVY 115
LV +DREE + +L++TA D ++ T + ++V+D NDN+P F Q +Y
Sbjct: 194 LVLDRALDREEQPELTLILTALDGGAPPRSGTTIVHIEVVDINDNAPQFIQSLY 247
>gi|441611774|ref|XP_004088040.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Nomascus leucogenys]
Length = 4067
Score = 57.8 bits (138), Expect = 6e-06, Method: Composition-based stats.
Identities = 80/280 (28%), Positives = 117/280 (41%), Gaps = 53/280 (18%)
Query: 42 ALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDV 100
AL N + E+ S + +SG L+ T+ +DRE + ++ L +TA D A T V V V
Sbjct: 436 ALMNSRSLELF-SIDPQSG-LIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTV 493
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLA 157
D ND+SPVF Q YR +L NV ++ I + ATD D A Y+
Sbjct: 494 ADRNDHSPVFEQAQYR-------ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFV 543
Query: 158 VPSNLVV-------IVPQTGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVW 208
P I P++G + +G + +E YEL VEA D Q P P
Sbjct: 544 GPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSAT 598
Query: 209 LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGR 262
++ + VL D AP EKR V + VRP R+ ++ D + G
Sbjct: 599 VRVHITVL---------DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGL 649
Query: 263 IVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ + + R F I G+++V DFE
Sbjct: 650 VHYNIISGNSRGHFAID--------SLTGEIQVVAPLDFE 681
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 559 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 617
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 618 KRY---VAQVREDV-------RPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDS 667
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 668 LTGEIQVVA--PLDFEAEREYALRIRAQDAGRP 698
Score = 42.4 bits (98), Expect = 0.31, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 30/179 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 1097 ENSIVGSVVA--QITAVDPDEGPNAHIMYQIVEGNIPELFQM------------DIFSGE 1142
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIV 119
L D+D E +Y +V+ AT +++A HV + +D+NDNSPV + Q ++ V
Sbjct: 1143 LTALI-DLDYEARQEYVIVVQATSAPLVSRATVHVRL--VDQNDNSPVLNNFQILFNNYV 1199
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
+ + S + IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1200 SNRSDTFPSGI--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1250
Score = 41.2 bits (95), Expect = 0.73, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 87/218 (39%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 1000 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1047
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V+ Y L A D +G+ T V + V+ D NDN+PVF + + V + NS V
Sbjct: 1048 AVSVYELTAYAVD-RGVPPLRTPVNIQVMVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1101
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1102 G-----SVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1156
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 1157 YVIVVQATSAPLVSRATVHVRLVDQNDNSPVLNNFQIL 1194
Score = 38.5 bits (88), Expect = 4.1, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 22/177 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKV 114
++ SG + + + +D E+ Y+L ITA D KA+T +V V V D NDN+P F
Sbjct: 926 DADSGAITLQA-PLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASH 984
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN---LVVIVPQ 168
Y +V + F+S+ +SATD D +V Y + I P
Sbjct: 985 YTGLVSE----------DAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPT 1034
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQL 221
+G + + V YELT A D P QV +Q N+PV E+
Sbjct: 1035 SGIVRTVRRLDREAVSVYELTAYAVDRGVPPLRTPVNIQVMVQDVNDNAPVFPAEEF 1091
Score = 37.7 bits (86), Expect = 8.1, Method: Composition-based stats.
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 29/190 (15%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSG-DIDREE 73
+ V + + + + Y IT GN + FA+ ++ GV LVT +D ++
Sbjct: 795 VSVTAVXRDANSAISYQITGGNTRNRFAI------------STQGGVGLVTLALPLDYKQ 842
Query: 74 VAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHW 133
+ LV+TA+D + ++ +V +++ D N + PVF Y V + +
Sbjct: 843 ERYFKLVLTASD-RALHD-HCYVHINITDANTHRPVFQSAHYSVSVNEDR---------- 890
Query: 134 KKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPP---SDDVEYELTV 189
+ S+I +SA+D D G+ + NL +T P D V Y L +
Sbjct: 891 RVGSTIVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAPLDYEDQVTYTLAI 950
Query: 190 EAHDLQSPSR 199
A D P +
Sbjct: 951 TARDNGIPQK 960
>gi|148747868|ref|NP_444366.3| protocadherin beta 11 precursor [Mus musculus]
gi|14039454|gb|AAK53229.1|AF326304_1 protocadherin-betaK [Mus musculus]
gi|13876282|gb|AAK26061.1| protocadherin beta 11 [Mus musculus]
gi|148678213|gb|EDL10160.1| mCG141285 [Mus musculus]
gi|182888197|gb|AAI60342.1| Protocadherin beta 11 [synthetic construct]
Length = 797
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT D+ H +TV V D NDN+P F+Q Y V +
Sbjct: 402 LVTEGPLDRESRAEYNITITVWDLGTPRLTTQHTITVQVSDINDNAPAFTQTSYTLFVQE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVP-------SNLVVIVPQTGE 171
S IG++SATD+D + Y L +P ++L+ I P G+
Sbjct: 462 NNSPA----------LQIGTISATDSDSGSNAHITYSLLLPQDPQLALASLISINPDNGQ 511
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + + ++ +E V A D SP+
Sbjct: 512 LFVLRALDYESLQAFEFRVGATDQGSPA 539
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVT-VDVLDENDNSPVFSQKVY 115
LV +DREE + +L++TA D ++ T + ++V+D NDN+P F Q +Y
Sbjct: 194 LVLDRALDREEQPELTLILTALDGGAPPRSGTTIVHIEVVDINDNAPQFIQSLY 247
>gi|395504704|ref|XP_003756687.1| PREDICTED: protocadherin beta-2-like [Sarcophilus harrisii]
Length = 797
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 22/160 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE +Y++ IT D+ K+E ++TV + D NDNSPVF+Q+ Y+ + +
Sbjct: 403 LVTEGALDREYKDEYNITITVIDLGSPRLKSEYNLTVLISDVNDNSPVFTQRTYKLYLQE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPS-------NLVVIVPQTGE 171
N H IGSVSA+D D KV Y L P + + I G
Sbjct: 463 ----NNGPALH------IGSVSASDRDSGINAKVTYSLLPPESGELPLFSYISINSDNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ 210
L + ++ ++ TV A D SPS ++ Q+ +Q
Sbjct: 513 LYALRSLDYEAIQTFQFTVRAADGGSPSLSSQVLVQIVVQ 552
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 55/102 (53%), Gaps = 13/102 (12%)
Query: 50 EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNS 107
+IR+S+E K LV +DREE ++ +L +TA D G+ V + V+D NDN+
Sbjct: 181 QIRDSSEGKRYPELVLDKTLDREEKSEVTLTLTAVD-GGVPPRSGTAQVRILVVDINDNA 239
Query: 108 PVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
PVF+Q Y + + NS++ S + +VSATD D
Sbjct: 240 PVFAQLRYEVQIPE-----NSSIG-----SKVVTVSATDLDA 271
>gi|351703794|gb|EHB06713.1| Protocadherin-16 [Heterocephalus glaber]
Length = 3197
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 74/152 (48%), Gaps = 19/152 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+G +D E+ Y L + A D G +K + ++TV V D NDN+P FSQ +Y+ ++
Sbjct: 2233 TGPLDFEQCDHYHLQLLAHD--GPHKGQANLTVLVEDVNDNAPTFSQSLYQVML------ 2284
Query: 126 LNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDD 182
+ H S+I SVSATD D ++Y LA P+ + P G L T +
Sbjct: 2285 ----LEHTPPGSAILSVSATDRDSGANGHISYHLASPAEGFNVDPNNGTLFTTMGTLALG 2340
Query: 183 VE----YELTVEAHDLQSPSRYAREPAQVWLQ 210
E ++ +EA D +P R A+ V L+
Sbjct: 2341 HEGPGVVDVVLEARDHGAPVRAAQATVHVQLK 2372
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVIT 82
H V YSI GN F L+ P E L LV +D E + QY+L +
Sbjct: 2414 HATVDYSIISGNRGRVFQLE-PRLAEAGEGVGPGPQALGCLVLLEPLDFESLTQYNLTVA 2472
Query: 83 ATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIV 119
A D +++ VTV VLD NDN PVF+Q YR V
Sbjct: 2473 AADRGQPSRSSAVPVTVTVLDVNDNPPVFTQASYRVTV 2510
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 106/270 (39%), Gaps = 47/270 (17%)
Query: 43 LKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDV 100
L PT+ E+R +T +DRE + Y+ ++A D T VT+ V
Sbjct: 1802 LLEPTSGELRTATA------------LDREHCSSYAFSVSAVDGAAAGPLSTTVPVTITV 1849
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA 157
D ND++P F R + SL++ ++G++ A D D + Y+LA
Sbjct: 1850 RDVNDHAPTFPTSPLRLRLPRPGPSLSTPT------LALGTLRAEDRDAGANASILYRLA 1903
Query: 158 -VPSNLVVIVPQTGELLLTGDP----PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFN 212
+P + TGE+ + P P D V L + A DL P+R A + LQ
Sbjct: 1904 GLPPPGTTVDSYTGEIRMARSPVTLGPRDRV---LFIVATDLGRPARSATGVVIIGLQGE 1960
Query: 213 SPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETE 272
S E+ + SEA R T + P + G G I +++ E
Sbjct: 1961 S-----ERGPRFPRASSEAVLRENAPPGTPVISPK-----AVHAGGSNGPITYSILSGNE 2010
Query: 273 REKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ F I+ IT VR + DFE
Sbjct: 2011 KGIFSIQPSTGAIT------VRSAEGLDFE 2034
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 25/131 (19%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LVR++++ G+ F L + SG L + +D E A++ LV+ A
Sbjct: 2532 PHGLVRFTLSSGDPLGLFEL------------DESSGALRLAH-PLDCETQARHQLVVQA 2578
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G + A VTV+V D ND+ P F + L +SL N +++ ++
Sbjct: 2579 ADPAGTHFALAPVTVEVQDVNDHGPAFPLNL-------LSTSLAENQPPGTLVTTLHAI- 2630
Query: 144 ATDADGDKVAY 154
DGD A+
Sbjct: 2631 ----DGDAGAF 2637
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 84/207 (40%), Gaps = 26/207 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V + P+ + YS+ Q +++ +P T E+
Sbjct: 1112 ENQPPGTSVGQ--VFATDRDSGPNGRLTYSLRQLSEDSKAFRIHPQTGEV---------- 1159
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
T +DRE+ + + L++ D + T V + VLD NDNSP F Q G
Sbjct: 1160 --TTLQTLDREQQSSFQLLVQVQDGGSPPHSTTGTVHIAVLDLNDNSPTFLQ-ASGAAGG 1216
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGEL-----LL 174
L + V +++ + + + + Y L P S L + P +GEL L+
Sbjct: 1217 GLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGELHTAASLI 1276
Query: 175 TGDPPSDDVEYELTVEAHDLQSPSRYA 201
+ P Y LT+ AHD SP R A
Sbjct: 1277 RAERP----HYVLTLSAHDQGSPPRSA 1299
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 17/169 (10%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ TF L E R ++ LV +G++DRE + Y L + A D G+
Sbjct: 176 YALSGDGAGETFRL------ETRPGSDGAPVPELVIAGELDRENRSHYMLQLEAYD-GGL 228
Query: 90 --NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
KA+ + V +LD ND++P F+Q Y +V + +L + F+S A A
Sbjct: 229 PPRKAQALLDVTLLDINDHAPAFNQSRYHAVVSE---TLAPGSPVLQVFASDADAGANGA 285
Query: 148 DGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHD 193
++ + + I P+TG L L + P D + +EL V+A D
Sbjct: 286 VTYEINRRQSEGDGPFTIDPRTGLLRL--ERPLDFEQRRVHELVVQARD 332
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 402 EGGEGH-FAL----------STQDSIIYLVCVARQLDREERDAYNLRVTATDSGSPPLRA 450
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + + D NDN+P F +++YR
Sbjct: 451 EAAFVLHITDVNDNAPTFDRQLYR 474
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y + G D H F L S +G L V +DRE+ A++ L + A+D
Sbjct: 1479 VSYRLAAGGDGH-FRL------------HSSTGALSVVR-PLDREQRAEHILTVVASDHG 1524
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIV 119
++ T + TV V+D ND +P F Q+ Y ++
Sbjct: 1525 SPPRSSTQLLTVSVVDVNDEAPAFQQQDYSVLL 1557
>gi|426350322|ref|XP_004065330.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-14 [Gorilla
gorilla gorilla]
Length = 787
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 82/179 (45%), Gaps = 32/179 (17%)
Query: 32 ITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN- 90
I DN F LK PT K+ LV+ +DRE A+Y++ IT TD+
Sbjct: 382 ICSIQDNLPFFLK-PTF---------KNFFTLVSEKALDRESQAEYNITITVTDLGTPRL 431
Query: 91 KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD 150
K E ++TV V D NDN+P+F+Q Y V + NS H IGSVSATD D
Sbjct: 432 KTEYNITVLVSDVNDNAPIFTQTSYTLFVRE----NNSPALH------IGSVSATDRDSG 481
Query: 151 ---KVAYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPS 198
+V Y L P ++LV I G L + + E+E V A D SP+
Sbjct: 482 TNAQVTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA 540
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 45 NPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDV 100
+P +H +I +S++ K LV +D E+ A+ L +TA D K+ T V + V
Sbjct: 173 SPNSHFYIKIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKV 232
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
LD NDN+P F Q +Y V + + + W I ++SA D D K++Y
Sbjct: 233 LDINDNAPEFPQSLYEVQVPE-----DRPLGSW-----IATISAKDLDAGNYGKISYTF 281
>gi|194219828|ref|XP_001504126.2| PREDICTED: protocadherin beta-16 [Equus caballus]
Length = 795
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 92/196 (46%), Gaps = 31/196 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ K + +TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTEGSLDRESRAEYNITITVTDMGSPRLKTQHSITVLVSDVNDNAPAFTQTSYTLWVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D ++ Y L P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDTDAGANAQLTYSLLPPQDPHLPLASLVSINADNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ-----L 221
L + ++ +E V A D SP+ ++ +V + NSP VL Q
Sbjct: 513 LFALRSLDYEALQAFEFGVGATDRGSPALSSQARVRVLVLDANDNSPFVLYPLQNGSAPC 572
Query: 222 LQMIDRKSEAPHRIEK 237
+++ R +EA + + K
Sbjct: 573 TELVPRAAEAGYLVTK 588
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 22/117 (18%)
Query: 52 RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVF 110
RN ++ + LV ++DREE + L +TA D + T V ++V+D NDN+P F
Sbjct: 183 RNRSDGRKYPELVLDKELDREEEPEILLTLTAMDGGSPPRYGTAQVRIEVVDSNDNAPEF 242
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS----VSATDADG---DKVAYKLAVPS 160
Q YR H + S +GS VSA+D D K++Y L PS
Sbjct: 243 GQPFYRV--------------HIPENSPVGSLVVTVSASDLDSGVYGKISYTLFQPS 285
>gi|410913749|ref|XP_003970351.1| PREDICTED: uncharacterized protein LOC101077501 [Takifugu rubripes]
Length = 14186
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 81/149 (54%), Gaps = 20/149 (13%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVT-VDVLDENDNSPVFSQ 112
+T SK G LL+ ++DREE L +TA D ++ T V V VLD NDN+PVFSQ
Sbjct: 9701 NTGSKYGELLLEK-ELDREEQKDMKLKLTALDGGSPQRSGTVVIHVTVLDANDNAPVFSQ 9759
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPS----NLVVI 165
+Y + + SS+N+ V +VSATDAD +V Y+ + S N+ +
Sbjct: 9760 ALYSATLPE-NSSMNTPVI---------TVSATDADEGINGEVTYEFSRISEKSRNMFSL 9809
Query: 166 VPQTGELLLTGDPPSDDVE-YELTVEAHD 193
TGE+ +TG+ +D + YE+ VEA D
Sbjct: 9810 NQHTGEITVTGNIDYEDGQKYEVFVEAKD 9838
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 97/199 (48%), Gaps = 35/199 (17%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE 93
Q NDN A RN+ E LV ++DRE+ + +L +TA D ++
Sbjct: 10482 QKNDNFILAAN-------RNTIE------LVLDKELDREKQHELNLQLTALDGGSPQRSG 10528
Query: 94 THVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---- 148
T V V VLD NDN+PVFSQ VY K+SL N SH + + VSATDAD
Sbjct: 10529 TVVIHVTVLDANDNAPVFSQAVY-------KASLPEN-SHLD--TVVMQVSATDADEGVN 10578
Query: 149 GDKVAYKLAVPS----NLVVIVPQTGEL-LLTGDPPSDDVEYELTVEAHDLQSPSRYARE 203
GD V Y+ S N+ I ++G++ +++ + YE+ V+A D S YA+
Sbjct: 10579 GD-VTYEFGHVSEDVKNVFSIDKKSGQIKVISVIDYESESSYEIRVKAKDGLGLSSYAKV 10637
Query: 204 PAQVW-LQFNSPVLQDEQL 221
V + N+P++ + L
Sbjct: 10638 IISVTDVNDNAPIINIKSL 10656
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 91/180 (50%), Gaps = 31/180 (17%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
H +V+ I + N NH F L +R+ E V LV ++DRE+ +LV+ A
Sbjct: 1842 HNVVKDYILEKN-NH-FVLS------VRDDVEGSKSVELVLDKELDREKEQNVNLVMVAV 1893
Query: 85 DVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D ++ T + + VLD NDN+PVF Q VY K++L N + + + +VS
Sbjct: 1894 DGGNPQRSGTATIQITVLDANDNAPVFEQAVY-------KANLPENAALG---TVVLTVS 1943
Query: 144 ATDAD---GDKVAYKLAVPSN----LVVIVPQTGELLLTGDPPSD---DVEYELTVEAHD 193
A+DAD +V Y+ + S+ + + +TGE+ ++G P D + YE+ ++A D
Sbjct: 1944 ASDADEGVNGEVTYEFSRISDKAKKVFTLNSKTGEIKVSG--PLDFESNPNYEMRIDAKD 2001
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 31/180 (17%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
H +V+ I + N NH F L +R+ E V LV ++DRE+ +LV+ A
Sbjct: 223 HNVVKDYILEKN-NH-FVLS------VRDDVEGSKSVELVLDKELDREKEQNVNLVMVAV 274
Query: 85 DVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D ++ T + + VLD NDN+PVF Q VY K+ L N + + + +VS
Sbjct: 275 DGGNPQRSGTATIQITVLDANDNAPVFEQAVY-------KADLPENAALG---TVVLTVS 324
Query: 144 ATDAD---GDKVAYKLAVPSN----LVVIVPQTGELLLTGDPPSD---DVEYELTVEAHD 193
A+DAD +V Y+ + S+ + + +TGE+ ++G P D + YE+ ++A D
Sbjct: 325 ASDADEGVNGEVTYEFSRISDKAKKVFTLNSKTGEIKVSG--PLDFESNPNYEMRIDAKD 382
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 111/230 (48%), Gaps = 43/230 (18%)
Query: 8 TGVKGLPILVASSHKH---PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLV 64
+ V+G ++ +H + + +Y++ Q NDN A RN+ E LV
Sbjct: 7304 SAVRGARFVIEEAHDADIGQNSVQQYNL-QKNDNFILAAN-------RNTIE------LV 7349
Query: 65 TSGDIDREEVAQYSLVITATDVKGINKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLK 123
++DRE+ + +L +TA D ++ T V V VLD NDN+PVFSQ VY K
Sbjct: 7350 LDKELDREKQHELNLQLTALDGGSPQRSGTVVIHVTVLDANDNAPVFSQAVY-------K 7402
Query: 124 SSL--NSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPS----NLVVIVPQTGEL- 172
+SL NS V + + VSATDAD GD V Y+ S N+ I ++G++
Sbjct: 7403 ASLPENSPVD-----TVVMQVSATDADEGVNGD-VTYEFGHVSEDVKNVFSIDKKSGQIK 7456
Query: 173 LLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVW-LQFNSPVLQDEQL 221
+++ + YE+ V+A D S YA+ V + N+P++ + L
Sbjct: 7457 VISVIDYESESSYEIRVKAKDGLGLSSYAKVIISVTDVNDNAPIINIKSL 7506
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 97/201 (48%), Gaps = 39/201 (19%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE 93
Q NDN A RN+ E LV ++DRE+ + +L +TA D ++
Sbjct: 8121 QKNDNFILAAN-------RNTIE------LVLDKELDREKQHELNLQLTALDGGSPQRSG 8167
Query: 94 THVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSL--NSNVSHWKKFSSIGSVSATDAD-- 148
T V V VLD NDN+PVFSQ VY K+SL NS V + + VSATDAD
Sbjct: 8168 TVVIHVTVLDANDNAPVFSQAVY-------KASLPENSPVD-----TVVMQVSATDADEG 8215
Query: 149 --GDKVAYKLAVPS----NLVVIVPQTGEL-LLTGDPPSDDVEYELTVEAHDLQSPSRYA 201
GD V Y+ S N+ I ++G++ +++ + YE+ V+A D S YA
Sbjct: 8216 VNGD-VTYEFGHVSEDVKNVFSIDKKSGQIKVISVIDYESESSYEIRVKAKDGLGLSSYA 8274
Query: 202 REPAQVW-LQFNSPVLQDEQL 221
+ V + N+P++ + L
Sbjct: 8275 KVIISVTDVNDNAPIINIKSL 8295
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 95/199 (47%), Gaps = 35/199 (17%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE 93
Q NDN A RN+ E LV ++DRE+ + +L +TA D ++
Sbjct: 5888 QKNDNFILAAN-------RNTIE------LVLDKELDREKQHELNLQLTALDGGSPQRSG 5934
Query: 94 THVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---- 148
T V V VLD NDN+PVFSQ VY K+SL N + + VSATDAD
Sbjct: 5935 TVVIHVTVLDANDNAPVFSQAVY-------KASLPEN---SPLDTVVMQVSATDADEGVN 5984
Query: 149 GDKVAYKLAVPS----NLVVIVPQTGEL-LLTGDPPSDDVEYELTVEAHDLQSPSRYARE 203
GD V Y+ S N+ I ++G++ +++ + YE+ V+A D S YA+
Sbjct: 5985 GD-VTYEFGHVSEDVKNVFSIDKKSGQIKVISVIDYESESSYEIRVKAKDGLGLSSYAKV 6043
Query: 204 PAQVW-LQFNSPVLQDEQL 221
V + N+P++ + L
Sbjct: 6044 IISVTDVNDNAPIINIKSL 6062
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 105/230 (45%), Gaps = 35/230 (15%)
Query: 6 SGTGVKGLPILVASSHKHP--HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLL 63
S + VKG L+ +H V+ Q ND+ + T++ R E L
Sbjct: 3446 SESAVKGARFLLGEAHDADIGQNTVQGYTLQQNDHFKLNVNTKTSN--RKYCE------L 3497
Query: 64 VTSGDIDREEVAQYSLVITATDVKGINKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDL 122
+ ++DRE+ + +++TA D ++ T V V VLD NDN+PVFSQ VY
Sbjct: 3498 LLDKELDREDQKEMMMLLTALDGGSPQRSGTVVIHVTVLDANDNAPVFSQAVY------- 3550
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAY---KLAVPSNLVVIVPQTGELLLTG 176
K+SL N + + VSATDAD ++ Y ++ + + P+TGE+ +
Sbjct: 3551 KASLPEN---SPLDTVVMQVSATDADEGVNKEITYGFDHVSDANQAFALNPKTGEVTVAS 3607
Query: 177 DPPSDDVE----YELTVEAHDLQSPSRYAREPAQVW-LQFNSPVLQDEQL 221
S D E YE+ + A D YA ++ + N+PV+Q + L
Sbjct: 3608 ---SIDYEKKSSYEMQMSAKDGLGLVAYATLMIEITDVNDNAPVIQLKSL 3654
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 95/205 (46%), Gaps = 36/205 (17%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y++ Q N F L T + R E L+ ++DRE+ + +++TA D
Sbjct: 5092 YTLQQ---NDHFKLNINTKADARKYCE------LLLDKELDREDQREMMMLLTALDGGSP 5142
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
++ T V V VLD NDN+PVFSQ VY K+SL N + + VSATDAD
Sbjct: 5143 QRSGTVVIHVTVLDANDNAPVFSQAVY-------KASLPEN---SPLDTVVMQVSATDAD 5192
Query: 149 GDKVAYKLAVPSNLV-------VIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
+ V ++ NLV + +TGE+ L S D E YEL + A D
Sbjct: 5193 -EGVNSEITYGFNLVSEERQPFSLNLKTGEVRLAS---SIDYETESTYELQISAKDGLGL 5248
Query: 198 SRYAREPAQVW-LQFNSPVLQDEQL 221
YA +V + N+PV+Q + L
Sbjct: 5249 GSYATLIIEVTDVNDNAPVIQLKSL 5273
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 17/172 (9%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVT-VDVLDENDNSPVFSQK 113
+E K+ +LVT G +DRE ++Y++ ITATD A + + V D NDN P F+Q+
Sbjct: 11483 SEVKNYYMLVTDGPLDREFQSEYNITITATDAGSPPLASVKILKIVVNDINDNPPTFTQR 11542
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNL-----VVIVPQ 168
Y +++ N I +V D K+ Y ++ SNL + I +
Sbjct: 11543 EY-------DANILENQPVGTFVMKIQAVDVDDGSNAKIMYHISRDSNLETSSFLTINSE 11595
Query: 169 TGELLLTGDPPSD-DVEYELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
TG L + + V +++ V HD SP + V+++ N+PV+
Sbjct: 11596 TGALFTSRLFDYEQSVHFQIKVTVHDGGSPQLSSTCTVNVFIKDQNDNAPVV 11647
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 89/192 (46%), Gaps = 33/192 (17%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNST----ESKSGVLLVTSGDIDREEVAQYSLVITAT 84
R+ I + +D T H RN + V LV + ++DRE + + SL++TA
Sbjct: 4261 RFPIEEAHDADIGKYSVQTYHLQRNDYFILGVGTNSVELVLNKELDRESLKEMSLILTAL 4320
Query: 85 DVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG--- 140
D ++ + ++VLD NDN PVFSQ VY K+SL N S +G
Sbjct: 4321 DGGSPQRSGSVKIHINVLDANDNVPVFSQAVY-------KASLQEN-------SPVGTLI 4366
Query: 141 -SVSATDAD---GDKVAYKLAVPS----NLVVIVPQTG--ELLLTGDPPSDDVEYELTVE 190
+++ATDAD +V Y S ++ I +TG EL+ D + + +EL V
Sbjct: 4367 LTLTATDADEGVNGEVVYDFGHISEDIKSIFRIDQKTGDIELMTMVDFETTSI-FELRVT 4425
Query: 191 AHDLQSPSRYAR 202
A D + YA+
Sbjct: 4426 AKDGLGLTSYAK 4437
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 23/154 (14%)
Query: 51 IRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPV 109
++ ++ V LV ++DRE+ +LV+ A D ++ T + + VLD NDN+PV
Sbjct: 2649 VKEGSDGSKNVELVLDKELDREKEQNVNLVMVAVDGGNPQRSGTATIQITVLDANDNAPV 2708
Query: 110 FSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSN----L 162
F Q VY K+ L N + + + +VSA+DAD +V Y+ + S+ +
Sbjct: 2709 FEQAVY-------KADLPENAALG---TVVLTVSASDADEGVNGEVTYEFSRISDKAKKV 2758
Query: 163 VVIVPQTGELLLTGDPPSD---DVEYELTVEAHD 193
+ +TGE+ ++G P D + YE+ + A+D
Sbjct: 2759 FTLNSKTGEIKVSG--PLDFESNPNYEMRINAND 2790
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 89/184 (48%), Gaps = 27/184 (14%)
Query: 51 IRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVT-VDVLDENDNSPV 109
++ T ++ L+ ++DRE+ + +++TA D ++ T V V VLD NDN+PV
Sbjct: 1019 VKTKTSNQKYCELLLDKELDREDQKEMMMLLTALDGGSPQRSGTVVIHVTVLDANDNAPV 1078
Query: 110 FSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLV------ 163
FSQ VY K+SL N + + VSATDAD + V ++ NL+
Sbjct: 1079 FSQAVY-------KASLPEN---SPLDTVVMQVSATDAD-EGVNREITYGFNLLSEERQP 1127
Query: 164 -VIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVW-LQFNSPVLQ 217
+ +TGE+ L S D E YE+ + A D YA ++ + N+PV+Q
Sbjct: 1128 FSLNLRTGEVRLAS---SIDYERKATYEMQISAKDGLGLGSYATLIIEITDVNDNAPVIQ 1184
Query: 218 DEQL 221
+ L
Sbjct: 1185 LKSL 1188
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 72/142 (50%), Gaps = 23/142 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
+V +DRE +L + A D ++ T ++ + VLD NDN+PVF+Q VY
Sbjct: 12762 MVLQKPLDRERHPHLTLKLIAVDGGTPQRSGTVNIDITVLDANDNAPVFNQSVY------ 12815
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAV----PSNLVVIVPQTGELLL 174
K+S+ N K S++ +V+ATDAD + Y L+ + + I TG + +
Sbjct: 12816 -KASIMENT---KIGSNVVTVNATDADSGIYGLITYSLSKMKGGAAEIFTIDESTGAITV 12871
Query: 175 TGDPPSD---DVEYELTVEAHD 193
+G P D D +YE+ VEA D
Sbjct: 12872 SG--PIDYEKDRKYEVRVEAKD 12891
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 16/104 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIV-- 119
+V +DRE + SL + A D ++ T ++ VD+LD NDN+PVF+Q +Y+ V
Sbjct: 11966 MVIEKSLDRETQPRLSLKLLAVDGGNPQRSGTVNIDVDILDANDNAPVFNQSLYKATVTE 12025
Query: 120 -------------GDLKSSLNSNVSHWKKFSSIGSVSATDADGD 150
D+ S N V++ S G A D DGD
Sbjct: 12026 NAPKGTLIMTVNASDIDSGSNGKVTYSFSKSKAGVTDAFDIDGD 12069
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 72/142 (50%), Gaps = 23/142 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
+V +DRE +L + A D ++ T ++ + VLD NDN+PVF+Q VY
Sbjct: 13572 MVLQKPLDRERHPHLTLKLIAVDGGTPQRSGTVNIDITVLDANDNAPVFNQSVY------ 13625
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAV----PSNLVVIVPQTGELLL 174
K+S+ N K +++ +V+ATDAD + Y L+ + + I TG + +
Sbjct: 13626 -KASIMENT---KIGTNVVTVNATDADSGINGLITYSLSKMKGGAAEIFTIDESTGAITV 13681
Query: 175 TGDPPSD---DVEYELTVEAHD 193
+G P D D +YE+ VEA D
Sbjct: 13682 SG--PIDYEKDRKYEVRVEAKD 13701
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 20/178 (11%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+ +G+ID E+ +Y + + A D G++ +ET V +D+ D NDN+PV +Y V L
Sbjct: 9816 ITVTGNIDYEDGQKYEVFVEAKDGYGLS-SETKVIIDITDVNDNAPV----IY---VKSL 9867
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDADGD-----KVAYKLAVPSNLVVIVPQTGELLLTGD 177
K + +VS S +G ++ D D + + + + VP LV + L+ TG
Sbjct: 9868 KDPVAEDVSPG---SEVGIINVQDRDSENNRQVRCSIQQNVPFKLVPSIKNYYSLVTTGQ 9924
Query: 178 PPSDDV-EYELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEA 231
+ V +Y +T+ A D SP + + + + N PV ++E + + A
Sbjct: 9925 LDRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESYSAYVSENNRA 9982
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE A++ L I D ++ T V V VLD NDN PVFSQ+VY+ V
Sbjct: 11281 LVLKKALDRETQAEHVLRINGIDGGSPARSGTASVHVRVLDANDNVPVFSQRVYKAFV-- 11338
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPS----NLVVIVPQTGELLL 174
+ + + + I ++ATDAD V+Y + S ++ I P TGE+ +
Sbjct: 11339 --------MENSARGTVITRLNATDADEGVYGAVSYSFSHLSEKMGGVIEIDPLTGEVRV 11390
Query: 175 TGDPPSDDVE-YELTVEAHD 193
G ++ +EL V+A D
Sbjct: 11391 AGLFDYEEANTHELDVQAKD 11410
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVT-VDVLDENDNSPVFSQKVYRFIVGD 121
LV ++DRE+ + +L +TA D ++ T V V VLD NDN+PVFSQ VY
Sbjct: 8912 LVLDKELDREKQHELNLQLTALDGGSPQRSGTVVIHVTVLDANDNAPVFSQAVY------ 8965
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
K+SL N + + VSATDAD
Sbjct: 8966 -KASLPEN---SPLDTVVMQVSATDAD 8988
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 60/105 (57%), Gaps = 10/105 (9%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIV- 119
LVT+G +DRE V+ Y++ I+ATD ++ ++T + + V D NDN PVF ++ Y V
Sbjct: 2082 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKT-LHLSVADINDNPPVFEEESYSAYVS 2140
Query: 120 -----GDLKSSLNSNVSHWKKFSS-IGSVSATDADGDKVAYKLAV 158
G + S+++ W++ + I S+ A + +G V+ ++V
Sbjct: 2141 ENNRAGSILCSVSAGDPDWRQNGTVIYSLLAAEVNGAPVSSYVSV 2185
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 86/187 (45%), Gaps = 21/187 (11%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
S + K+G + V G +D E V Y L I A D G++ + T V +DV D NDN P+
Sbjct: 9011 SIDRKNGGIKV-KGALDFETVTTYDLRIKAKDGLGLS-SYTKVIIDVTDVNDNIPI---- 9064
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD-----KVAYKLAVPSNLVVIVPQ 168
+Y V + S + NVS S +G ++ DAD + + + + VP LV +
Sbjct: 9065 IY---VKSITSPIPENVSPG---SEVGIINVQDADSENNQVVRCSIQQNVPFKLVPSIKN 9118
Query: 169 TGELLLTGDPPSDDV-EYELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQM 224
L+ TG + V +Y +T+ A D SP + + + + N PV ++E
Sbjct: 9119 YYSLVTTGQLDRELVSDYNITISATDEGSPPLSSSKTLHLSVADINDNPPVFEEESYSAY 9178
Query: 225 IDRKSEA 231
+ + A
Sbjct: 9179 VSENNRA 9185
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT+G +DRE V+ Y++ I+ATD ++ ++T + + V D NDN PVF ++ Y V
Sbjct: 10708 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKT-LNLSVADINDNPPVFEEESYSAYVS 10766
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + + S++ SVSA D D
Sbjct: 10767 E----------NNRAGSTLCSVSAGDPD 10784
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 64/126 (50%), Gaps = 26/126 (20%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+Q+VR SI Q N F L I+N LVT+G +DRE V+ Y++ I+AT
Sbjct: 9097 NQVVRCSIQQ---NVPFKL----VPSIKNYYS------LVTTGQLDRELVSDYNITISAT 9143
Query: 85 DVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
D ++ ++T + + V D NDN PVF ++ Y V + + + S++ SV
Sbjct: 9144 DEGSPPLSSSKT-LHLSVADINDNPPVFEEESYSAYVSE----------NNRAGSTLCSV 9192
Query: 143 SATDAD 148
SA D D
Sbjct: 9193 SAGDPD 9198
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT+G +DRE V+ Y++ I+ATD ++ ++T + + V D NDN PVF ++ Y V
Sbjct: 6769 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKT-LHLSVADINDNPPVFEEESYSAYVS 6827
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + + S++ SVSA D D
Sbjct: 6828 E----------NNRAGSALCSVSAGDPD 6845
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT+G +DRE V+ Y++ I+ATD ++ ++T + + V D NDN PVF ++ Y V
Sbjct: 463 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKT-LHLSVADINDNPPVFEEESYSAYVS 521
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + + S++ SVSA D D
Sbjct: 522 E----------NNRAGSTLCSVSAGDPD 539
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT+G +DRE V+ Y++ I+ATD ++ ++T + + V D NDN PVF ++ Y V
Sbjct: 2871 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKT-LHLSVADINDNPPVFEEESYSAYVS 2929
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + + S++ SVSA D D
Sbjct: 2930 E----------NNRAGSTLCSVSAGDPD 2947
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT+G +DRE V+ Y++ I+ATD ++ ++T + + V D NDN PVF ++ Y V
Sbjct: 3706 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKT-LHLSVADINDNPPVFEEESYSAYVS 3764
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + + S++ SVSA D D
Sbjct: 3765 E----------NNRAGSTLCSVSAGDPD 3782
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT+G +DRE V+ Y++ I+ATD ++ ++T + + V D NDN PVF ++ Y V
Sbjct: 4509 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKT-LHLSVADINDNPPVFEEESYSAYVS 4567
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + + S++ SVSA D D
Sbjct: 4568 E----------NNRAGSTLCSVSAGDPD 4585
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT+G +DRE V+ Y++ I+ATD ++ ++T + + V D NDN PVF ++ Y V
Sbjct: 5325 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKT-LHLSVADINDNPPVFEEESYSAYVS 5383
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + + S++ SVSA D D
Sbjct: 5384 E----------NNRAGSTLCSVSAGDPD 5401
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT+G +DRE V+ Y++ I+ATD ++ ++T + + V D NDN PVF ++ Y V
Sbjct: 6114 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKT-LHLSVADINDNPPVFEEESYSAYVS 6172
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + + S++ SVSA D D
Sbjct: 6173 E----------NNRAGSTLCSVSAGDPD 6190
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT+G +DRE V+ Y++ I+ATD ++ ++T + + V D NDN PVF ++ Y V
Sbjct: 7558 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKT-LHLSVADINDNPPVFEEESYSAYVS 7616
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + + S++ SVSA D D
Sbjct: 7617 E----------NNRAGSTLCSVSAGDPD 7634
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT+G +DRE V+ Y++ I+ATD ++ ++T + + V D NDN PVF ++ Y V
Sbjct: 8347 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKT-LHLSVADINDNPPVFEEESYSAYVS 8405
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + + S++ SVSA D D
Sbjct: 8406 E----------NNRAGSTLCSVSAGDPD 8423
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT+G +DRE V+ Y++ I+ATD ++ ++T + + V D NDN PVF ++ Y V
Sbjct: 9919 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKT-LHLSVADINDNPPVFEEESYSAYVS 9977
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + + S++ SVSA D D
Sbjct: 9978 E----------NNRAGSTLCSVSAGDPD 9995
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT+G +DRE V+ Y++ I+ATD ++ ++T + + V D NDN PVF ++ Y V
Sbjct: 1240 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKT-LHLSVADINDNPPVFEKESYSAYVS 1298
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + + S++ SVSA D D
Sbjct: 1299 E----------NNRAGSTLCSVSAGDPD 1316
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVG 120
L++ DRE V++Y++ +TATD G T T+ ++ D NDN+P+F ++ Y +
Sbjct: 12972 LISDQFFDRESVSKYNITVTATD-SGTPPLSTSTTLHLIISDVNDNAPLFEKQSYSAYI- 13029
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
V + +SI +VSA D+D
Sbjct: 13030 ---------VENNSPGTSIFTVSARDSD 13048
>gi|345793773|ref|XP_544297.2| PREDICTED: protocadherin beta-2 [Canis lupus familiaris]
Length = 791
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 96/196 (48%), Gaps = 31/196 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G +DRE A+Y++ IT +D+ K + ++TV V D NDN+P FSQ Y V +
Sbjct: 404 LVTNGALDRESQAEYNITITVSDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRE 463
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IG+VSATD D +V Y L P ++LV I G+
Sbjct: 464 ----NNSPALH------IGTVSATDRDAGANAQVTYSLLPPRDPHLPLASLVSINADNGQ 513
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ-----L 221
L + ++ +E+ V A D SP+ ++ +V + N+P VL Q
Sbjct: 514 LFALRSLDYEALQAFEVRVGAADRGSPALSSQALVRVLVLDDNDNAPFVLYPLQNGSAPC 573
Query: 222 LQMIDRKSEAPHRIEK 237
+++ R +EA + + K
Sbjct: 574 TELVPRAAEAGYLVTK 589
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 38 NHTFALKNPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVITATDVKGINKAETH 95
N+T + P +H N +S G+L LV +DREE A+ L +TA D ++ T
Sbjct: 171 NYTLS---PNSHFHLNLQDSPEGILPQLVLDKALDREERAEIRLTLTALDGGPPPRSGTA 227
Query: 96 -VTVDVLDENDNSPVFSQKVY 115
V ++VLD NDN+P F++ Y
Sbjct: 228 LVRIEVLDSNDNAPEFTKLFY 248
>gi|195350165|ref|XP_002041612.1| GM16650 [Drosophila sechellia]
gi|194123385|gb|EDW45428.1| GM16650 [Drosophila sechellia]
Length = 2943
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 74/145 (51%), Gaps = 17/145 (11%)
Query: 69 IDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE +Y L I ATD A+T V V VLD NDN P F + Y F + +
Sbjct: 527 LDREARDRYQLTILATDNGTPAAHAKTRVIVRVLDANDNDPKFQKSKYEFRIEE------ 580
Query: 128 SNVSHWKKFSSIGSVSATDAD-GDKVA--YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE 184
+ ++ S +G V+A+D D G+ A Y L ++ + P TGE + T +P ++
Sbjct: 581 ----NLRRGSVVGVVTASDLDLGENAAIRYSLLPINSSFQVHPVTGE-ISTREPLDRELR 635
Query: 185 --YELTVEAHDLQSPSRYAREPAQV 207
Y+L VEA D +P R AR P ++
Sbjct: 636 ELYDLVVEARDQGTPVRSARVPVRI 660
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 98/227 (43%), Gaps = 46/227 (20%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG--INKAE 93
N ++L N T + + +S+SG L+ T G +DRE A Y+ ++ ATD + A
Sbjct: 1383 NARLVYSLANETQWQF--AIDSQSG-LITTVGKLDRELQASYNFMVLATDGGRYEVRSAT 1439
Query: 94 THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GD 150
V ++VLD NDN PVF + Y +G + + + + K V A DAD
Sbjct: 1440 VPVQINVLDINDNRPVFERYPY---IGQVPALIQPGQTLLK-------VQALDADLGANA 1489
Query: 151 KVAYKLAVPSNLVV----IVPQTGELLLT--------------------GDPPSDDVEY- 185
++ Y L ++ V I P TG L + G PP +
Sbjct: 1490 EIVYSLNAENSAVSAKFRINPSTGALSASQSLASESGKLLHLEVVARDKGTPPQSSLGLI 1549
Query: 186 ELTVEAHDLQSPS-RYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEA 231
EL + +P R+ E +V L+ NSP +LLQ++ +S+
Sbjct: 1550 ELLIGEAPQGTPVLRFQNETYRVMLKENSP--SGTRLLQVVALRSDG 1594
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 69/123 (56%), Gaps = 15/123 (12%)
Query: 56 ESKSGVLLVTSGDI-DREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKV 114
+S+SG LVTS + D E+ +Y + + A+D+ G KA V V++ ++ +P F+++
Sbjct: 2304 DSESG--LVTSAFVFDYEQRQRYDMELLASDMGG-KKASVAVRVEIESRDEFTPQFTERT 2360
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGE 171
YRF+ L + V+ + + +G V+ATD+D +V Y+L+ P + + +G
Sbjct: 2361 YRFV-------LPAAVALPQGY-VVGQVTATDSDSGPDGRVVYQLSAPHSHFKVNRSSGA 2412
Query: 172 LLL 174
+L+
Sbjct: 2413 VLI 2415
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 97/216 (44%), Gaps = 51/216 (23%)
Query: 12 GLPILVASSH---KHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G P+ A +H V YS+ + + FA+ + H L+ S
Sbjct: 363 GAPLYAAHAHDKDSGSSGQVTYSLVKDSGKGLFAIDARSGH-------------LILSQH 409
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVT--VDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +++L++TATD G+ T++T VDV D NDN PVF ++ Y
Sbjct: 410 LDYESSQRHTLIVTATD-GGVPSLSTNLTILVDVQDVNDNPPVFEKEEYSV--------- 459
Query: 127 NSNVSHWKKFSS-IGSVSATDAD---GDKVAYKL----------AVPSNLVV----IVPQ 168
NVS + ++ I V+A+D D ++ Y++ ++ S+ V I P
Sbjct: 460 --NVSESRSINAQIIQVNASDLDTGNNARITYRIVDAGVDNVTNSISSSDVSHHFGIFPN 517
Query: 169 TGELLLTG--DPPSDDVEYELTVEAHDLQSPSRYAR 202
+G + L D + D Y+LT+ A D +P+ +A+
Sbjct: 518 SGWIYLRAPLDREARD-RYQLTILATDNGTPAAHAK 552
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 31/140 (22%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + YSIT GN + F S +S SG L ++ +DRE+ ++Y+L I A
Sbjct: 1277 PNADLIYSITGGNLGNKF------------SIDSSSGDL--SARPLDREQNSRYTLQIQA 1322
Query: 84 TDVKGINKA---ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG 140
+D +G K+ ++T+ V D+NDN+P RF + S+ + +S+
Sbjct: 1323 SD-RGQPKSRQGHCNITIFVEDQNDNAP-------RFKLSKYTGSVQEDA---PLSTSVV 1371
Query: 141 SVSATDAD---GDKVAYKLA 157
+SA DAD ++ Y LA
Sbjct: 1372 QISAVDADLGVNARLVYSLA 1391
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 80/191 (41%), Gaps = 42/191 (21%)
Query: 19 SSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYS 78
++H+ P VRYSI G+ + F S E+ SG + + +D E +Q
Sbjct: 272 AAHRSP---VRYSIYSGDPDGYF------------SIETNSGNIRIAK-PLDHEAKSQVL 315
Query: 79 LVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV---GDLKSSLNSNVSHWKK 135
L I AT + T V ++V D NDN+P F + R V +L + L + +H K
Sbjct: 316 LNIQATLGEPPVYGHTQVNIEVEDVNDNAPEFEASMVRISVPESAELGAPLYAAHAHDKD 375
Query: 136 FSSIGSVSATDADGDKVAYKLAVPS--NLVVIVPQTGELLLTGDPPSDDVEYE------L 187
S G +V Y L S L I ++G L+L S ++YE L
Sbjct: 376 SGSSG----------QVTYSLVKDSGKGLFAIDARSGHLIL-----SQHLDYESSQRHTL 420
Query: 188 TVEAHDLQSPS 198
V A D PS
Sbjct: 421 IVTATDGGVPS 431
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 27/155 (17%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V Y+I +G K+ T E+R S SG + + +G++D E + Y + ATD
Sbjct: 61 MVNYTIGEG-------FKHLTEFEVR----SASGEICI-AGELDFERRSSYEFPVLATDR 108
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS--IGSVSA 144
G++ + + + D NDN PVF + Y K SL + + SS I +V A
Sbjct: 109 GGLSTTAM-IKMQLTDVNDNRPVFYPREY-------KVSLRESPKAPSQASSTPIVAVVA 160
Query: 145 TDAD-GD--KVAYKLAV--PSNLVVIVPQTGELLL 174
TD D G+ +V+Y++ + + I TGE+ +
Sbjct: 161 TDPDYGNFGQVSYRIVAGNEAGIFRIDRSTGEIFV 195
>gi|156398552|ref|XP_001638252.1| predicted protein [Nematostella vectensis]
gi|156225371|gb|EDO46189.1| predicted protein [Nematostella vectensis]
Length = 1852
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 61/114 (53%), Gaps = 17/114 (14%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS T V L + S + ++RYSI GND F + S SGV
Sbjct: 1423 ENSAQSTSV--LTVAADDSDVGANAVLRYSIISGNDEKRFKIN------------STSGV 1468
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
++ T+ +D EE +QY L +TATD K A+T+VT+ V++ ND +P F+Q+ Y
Sbjct: 1469 IMTTT-PLDFEEKSQYGLEVTATDSK--YTAKTNVTIRVINLNDITPAFTQQNY 1519
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 114/270 (42%), Gaps = 50/270 (18%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
+ I +GN +F + +S L+ + +DRE A Y+LV+ AT+
Sbjct: 1031 FDIVEGNAGSSFKID-------------QSSGLISVAKRLDRETTANYTLVVRATETGSQ 1077
Query: 90 NKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
++ + T+ VLD NDN+PVF+ G SL+ N+ + ++ V+ATD D
Sbjct: 1078 GESVYNNATIRVLDVNDNAPVFNP-------GSYAKSLHENLPIGQ---TVAKVTATDRD 1127
Query: 149 ---GDKVAYKLAVP-SNLVVIVPQTGELLLTGDPP---SDDVEYELTVEAHDLQSPSRYA 201
KV Y+L+V ++ + P TG L+T P D Y L V A D PS+ A
Sbjct: 1128 EGENAKVTYELSVGDTSKFEVNPATG--LVTTKRPLDREDQASYSLRVTAMDHGKPSQSA 1185
Query: 202 REPAQVW---LQFNSPVL-QDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDG 257
+ L NSP Q + L + + + + + R+ S+ D
Sbjct: 1186 VAAITLTINDLNDNSPQFSQSKYTLTVTENTANGSNIL-------------RVLASDPDA 1232
Query: 258 EMEGRIVFALEKETEREKFKIRDENPWITV 287
GR+ +++ F+I ITV
Sbjct: 1233 GANGRVTYSIISGNHGNAFRIDSTTGRITV 1262
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 62/147 (42%), Gaps = 27/147 (18%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG- 88
YSI GND F + +S +G + T DRE ++Y L + A D
Sbjct: 1 YSIMDGNDQGMFTI------------DSSTGSITTTGRKFDRESESRYRLTVLAQDAANR 48
Query: 89 INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+K T V +DV DENDN+P F Y F N+ + + V+ATD D
Sbjct: 49 CHKGRTVVVIDVKDENDNAPEFPLNSYVF-----------NIRENTPAAQVAIVTATDRD 97
Query: 149 GD---KVAYKLAVPSNLVVIVPQTGEL 172
+ Y L N ++ +TGE+
Sbjct: 98 SGTNAAITYSLFSGENKFMMNSKTGEI 124
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 35/191 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYS T GN NH F L ++ +GV+ V S +D E+ + Y+L ++ TD
Sbjct: 306 LRYSFTSGNTNHAFTL------------DAVTGVVTV-SRSLDFEQRSSYALGLSVTDRG 352
Query: 88 GINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS-VSAT 145
+T H+ ++V D NDN PVFS Y+ S K+ + G+ VSAT
Sbjct: 353 SPPLTDTSHLLINVNDINDNPPVFSPSAYQ--------------SRVKENTPAGTQVSAT 398
Query: 146 DADGD---KVAYKLAVPSN--LVVIVPQTGELLLTGDPPSDD-VEYELTVEAHDLQSPSR 199
D D + + + ++ + I TG + + P ++ Y+LTV+A D P +
Sbjct: 399 DRDSSTNGALVFGIIKGNDDGVFTIDGSTGIISIAKSPDYENKTRYDLTVQARDRGVPVK 458
Query: 200 YAREPAQVWLQ 210
Y ++++
Sbjct: 459 YDTAQVTIFIE 469
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 40/197 (20%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ V Y+I GN ++F L + +SG+L V S +DRE + Y+LV+ A
Sbjct: 820 PNGAVTYAIISGNQGNSFQL------------DPRSGILSVRS-TLDRETIPSYTLVVKA 866
Query: 84 TDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLK--SSLNSNVSHWKKFSSIG 140
+D ++ T + V VLD NDN+P F + ++ G+++ +S++S V K
Sbjct: 867 SDAGSPQQSITASIHVSVLDVNDNAPRFEKSLFS---GEIREDASVHSTVLQVK------ 917
Query: 141 SVSATDAD-GDKVAYKLAVPS----NLVVIVPQTGELLLTGDPPSD---DVEYELTVEAH 192
D D G A L++ N + TG +L P D Y+LTV A
Sbjct: 918 ---VEDKDEGSNGAITLSLSGEGSDNFT--IDSTGFVL--SKTPLDYETTAAYQLTVTAR 970
Query: 193 DLQSPSRYAREPAQVWL 209
D SPS+ A ++ +
Sbjct: 971 DGGSPSKSATAQVKITI 987
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 82/197 (41%), Gaps = 33/197 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
GV + + + + YSI GN+N FA+ T + T
Sbjct: 701 GVAVCYVTATDADSGANGKISYSILSGNENMAFAMDRFTGE-------------ITTRVP 747
Query: 69 IDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE +A YSL I A D + A T V + + DENDN P F+ RF
Sbjct: 748 LDRETIASYSLTINADDGSLVRFMAATTVNISIADENDNQPTFTGP-SRF---------- 796
Query: 128 SNVSHWKKFSS-IGSVSATDAD-GDKVAYKLAVPS----NLVVIVPQTGELLLTGDPPSD 181
N+S + +G ++ATD D G A A+ S N + P++G L + +
Sbjct: 797 -NISEDSPTGTRVGQLTATDRDIGPNGAVTYAIISGNQGNSFQLDPRSGILSVRSTLDRE 855
Query: 182 DV-EYELTVEAHDLQSP 197
+ Y L V+A D SP
Sbjct: 856 TIPSYTLVVKASDAGSP 872
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 31/192 (16%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P + Y + GN F + ++ SG + V+S ++DRE YSL + A
Sbjct: 509 PRGRLEYRLISGNVKGAFNI------------DANSGSIRVSS-ELDRETTPSYSLQVEA 555
Query: 84 TDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
D +++ + VT+ + D NDNSP+F Q Y F V S +S+ H IG V
Sbjct: 556 RDGGSTSRSSSTRVTIALQDINDNSPIF-QGPYVFRV-----SESSSPGHQ-----IGQV 604
Query: 143 SATDAD----GDKVAYKLAVPSNLVVIVPQTGELLL-TGDPPSDDVEYELTVEAHDLQSP 197
+ATDAD GD V Y L+ +++ I TG + L T +Y +TV A D +P
Sbjct: 605 AATDADDSSNGD-VRYALSDNTDVFSINTSTGLITLKTQLDYEKKTQYMVTVTAKDGGTP 663
Query: 198 SRYAREPAQVWL 209
SR + +V +
Sbjct: 664 SRSSLTVVKVMV 675
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 18/112 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +G+ + L +L + + V YSI GN + F + +S +G
Sbjct: 1214 ENTANGSNI--LRVLASDPDAGANGRVTYSIISGNHGNAFRI------------DSTTGR 1259
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFS 111
+ V G +DRE +A Y+L I+A D G+ + V + V DENDNSP+F+
Sbjct: 1260 ITVV-GVVDREALASYNLTISAKD-SGVPPWVSTAFVAITVADENDNSPIFA 1309
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 37/203 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS + T V + V++S + + YSI G D+ F++ + +SG+
Sbjct: 1525 ENSPTSTSV----VKVSASDRDSFGSLSYSIVGGKDSDKFSI------------DQRSGI 1568
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVG 120
+ T+ +DRE V+ Y++ + TD + T VT+ +LDENDNSP F Y +
Sbjct: 1569 I-STADVLDRELVSLYAIQVRVTDAGNPPLSNLTWVTIKILDENDNSPKFDSSSYSSSI- 1626
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGD 177
L++S S+ S ++ATDAD ++ Y L+ ++ +I +G + L
Sbjct: 1627 -LENSAPSSFSF--------KLAATDADEGTNARITYNLS-RNDAFMIGASSGVITLA-- 1674
Query: 178 PPSD---DVEYELTVEAHDLQSP 197
P D Y+L ++A D +P
Sbjct: 1675 QPLDRENKSTYDLAIQARDHGTP 1697
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 64/143 (44%), Gaps = 17/143 (11%)
Query: 62 LLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
L+ T +DRE+ A YSL +TA D K A +T+ + D NDNSP FSQ Y V
Sbjct: 1154 LVTTKRPLDREDQASYSLRVTAMDHGKPSQSAVAAITLTINDLNDNSPQFSQSKYTLTVT 1213
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPS--NLVVIVPQTGELLLT 175
+ + S+I V A+D D +V Y + + N I TG + +
Sbjct: 1214 E----------NTANGSNILRVLASDPDAGANGRVTYSIISGNHGNAFRIDSTTGRITVV 1263
Query: 176 GDPPSDDV-EYELTVEAHDLQSP 197
G + + Y LT+ A D P
Sbjct: 1264 GVVDREALASYNLTISAKDSGVP 1286
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 86/191 (45%), Gaps = 31/191 (16%)
Query: 17 VASSHKHPHQLVRYSITQGNDNHT----FALKNPT-THEIRNSTESKSGVLLVTSGDIDR 71
V+ S HQ+ + + T +D+ +AL + T I ST L+ +D
Sbjct: 591 VSESSSPGHQIGQVAATDADDSSNGDVRYALSDNTDVFSINTSTG-----LITLKTQLDY 645
Query: 72 EEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
E+ QY + +TA D +++ T V V V D NDN P F++ +Y VG+
Sbjct: 646 EKKTQYMVTVTAKDGGTPSRSSLTVVKVMVDDVNDNPPQFAKSLYTCTVGE--------- 696
Query: 131 SHWKKFSSIGSVSATDADG---DKVAYK-LAVPSNLVVIVPQ-TGELLLTGDPPSDD--- 182
+ ++ V+ATDAD K++Y L+ N+ + + TGE +T P D
Sbjct: 697 -NLAAGVAVCYVTATDADSGANGKISYSILSGNENMAFAMDRFTGE--ITTRVPLDRETI 753
Query: 183 VEYELTVEAHD 193
Y LT+ A D
Sbjct: 754 ASYSLTINADD 764
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 27/123 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI +G D FA+ + +GVL V +I+RE V Y+L I A+D +
Sbjct: 1343 VFYSIVRG-DTSAFAIN------------AMNGVLTVKK-EINRETVPTYTLTIRASD-R 1387
Query: 88 G--INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G + ++ +TV V D NDN PVF+ + Y +G ++ + + +S+ +V+A
Sbjct: 1388 GSPMMTSDKELTVVVNDVNDNPPVFNSQSY---IGSVR-------ENSAQSTSVLTVAAD 1437
Query: 146 DAD 148
D+D
Sbjct: 1438 DSD 1440
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 104/247 (42%), Gaps = 29/247 (11%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVG 120
++ T G DRE A Y + + A D +++ + V +++LD NDN PVFS Y
Sbjct: 222 VIRTKGAFDRETKASYQVALRAQDGGSPSRSGQATVEIEILDVNDNRPVFSSAQY----- 276
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPP 179
+S++ +V+ +++ +V+A+D D G+ + + S T
Sbjct: 277 --TASVDEDVAIG---AAMVTVTASDKDNGNNADLRYSFTSG------NTNHAFTL---- 321
Query: 180 SDDVEYELTVE-AHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIE-- 236
D V +TV + D + S YA V + + P+ LL ++ ++ P
Sbjct: 322 -DAVTGVVTVSRSLDFEQRSSYALG-LSVTDRGSPPLTDTSHLLINVNDINDNPPVFSPS 379
Query: 237 --KRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVR 294
+ RV ++ ++ D G +VF + K + F I I++ ++ D
Sbjct: 380 AYQSRVKENTPAGTQVSATDRDSSTNGALVFGIIKGNDDGVFTIDGSTGIISIAKSPDYE 439
Query: 295 VKKRWDF 301
K R+D
Sbjct: 440 NKTRYDL 446
>gi|402872881|ref|XP_003919617.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B3 [Papio
anubis]
Length = 767
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 95/191 (49%), Gaps = 28/191 (14%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKG---INKAETHVTVDVLDENDNSPVFSQ 112
++K+ LVT G +DRE++ +Y++ ITATD KG ++ ++T +T+ +L+ NDN PVF Q
Sbjct: 400 DTKNTYRLVTDGALDREQIPEYNVTITATD-KGNPPLSSSKT-ITLHILNVNDNVPVFHQ 457
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD--GDKVAYKLAVPSNL-------- 162
Y V + + +SI VSA+D D + + Y V S+L
Sbjct: 458 ASYTVHVAE----------NNPPGASIAHVSASDPDLGPNGLVYYYIVASDLEPRELSSY 507
Query: 163 VVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRY--AREPAQVWLQFNSPVLQDE 219
V + PQ+G + + + + +ELT++A D SP+ A WL ++ +
Sbjct: 508 VSVSPQSGVVFVQRAFDHEQLHAFELTLQARDQGSPALXXDADSGPNAWLSYHIQQPSEP 567
Query: 220 QLLQMIDRKSE 230
LL + R E
Sbjct: 568 GLLSLGLRTGE 578
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + LV+ A D ++ T + V V D NDN PVF+Q +YR V +
Sbjct: 197 LVLKAPLDREEQPHHHLVLAAVDGGEPSRSCTTQIRVIVADANDNPPVFTQDMYRVGVAE 256
>gi|348518842|ref|XP_003446940.1| PREDICTED: protocadherin Fat 3-like [Oreochromis niloticus]
Length = 4724
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 82/173 (47%), Gaps = 24/173 (13%)
Query: 28 VRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
++YSI G+ F ++ + +R T SG +L +RE Y+L + A+
Sbjct: 59 IKYSIVSGDSEDIFQAEDFVMGDFCFLRICTNGGSGAIL------NREVQDNYTLTVKAS 112
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
G+ +A T V + VLD ND P+FS Y F+V + + L +SIG V+A
Sbjct: 113 APGGL-EALTTVYIRVLDTNDLRPLFSPTSYAFVVSE-SAPLG---------ASIGRVTA 161
Query: 145 TDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
TDAD + Y +L + P +G + LTG P D + +EL V+ D
Sbjct: 162 TDADVGSNGEFYYFFKNKIDLFAVHPTSGVITLTGRPRMDKQDRFELEVQVVD 214
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 95/222 (42%), Gaps = 42/222 (18%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
MENSK+GT V + L S+ + Y IT+GN+ F + + T
Sbjct: 1657 MENSKTGTYVITVSALSRSA-------IIYDITRGNEERCFFINHHTG------------ 1697
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
++ T +D E+ Y LV+ A + G+ +A T V + V+D ND+ PVF Q Y +V
Sbjct: 1698 -VITTRKPLDFEQTTSYFLVVRALSMAGV-EASTSVIIQVVDVNDSPPVFQQIRYVGVVS 1755
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPS 180
+ + +NS V + + ATD D + A + I+ +T + + D +
Sbjct: 1756 E-AAPINSVVLAEDGNPLV--IQATDKDRNHNALL------VFQIIGETARMFFSVDSGT 1806
Query: 181 DDV------------EYELTVEAHDLQSPSRYAREPAQVWLQ 210
+ E+ V D P R A PA+V ++
Sbjct: 1807 GSIRTIASLDYETFSEFVFRVHVRDSGQPPRDADSPAEVLIK 1848
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 59/132 (44%), Gaps = 20/132 (15%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
++LV + IT GN F L E K + SG +DRE+ Y L ITA+
Sbjct: 2957 NRLVSFCITGGNPRGVFGLA-------LVQGEWK----VYVSGLLDREQQDWYLLNITAS 3005
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
D G+ A T V V V+D NDN P+ +Q VY +S +V K +G+ A
Sbjct: 3006 D--GLYVAHTAVEVTVMDANDNRPICNQAVY-------STSFPEDVPINKGILRVGATDA 3056
Query: 145 TDADGDKVAYKL 156
++ Y L
Sbjct: 3057 DSGSSAEIQYSL 3068
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 13/90 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN + F++ NP K+G++ T+ +DRE+ A++ L IT D
Sbjct: 1160 LSYRITAGNPQNFFSI-NP-----------KTGLITTTARKLDREQQAEHFLEITVIDGP 1207
Query: 88 GINKAET-HVTVDVLDENDNSPVFSQKVYR 116
+ T V V V DENDN P F + YR
Sbjct: 1208 VTTRQSTVWVIVHVQDENDNPPTFPEVTYR 1237
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 16/117 (13%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G + + +L S+ P+ + Y+I GN+ F + + K G + V +
Sbjct: 3251 AVGTEVVRVLATSADIGPNAEITYNIRSGNELGKFTI------------DRKWGSISV-A 3297
Query: 67 GDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
D+D E Y L I A D ++ A T VT++++D NDN+P FSQ +Y +V +
Sbjct: 3298 DDLDFEVCKDYYLTIEAWDNGNPPLSTA-TMVTIELMDVNDNAPAFSQDIYNLLVSE 3353
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 68/168 (40%), Gaps = 19/168 (11%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK-AET 94
N+ + L NP R S G + T DREE Y LV+ + I + A
Sbjct: 1998 NEPLKYTLLNPVG---RFSIRPTCGAVFTTGVPFDREEKDSYELVVEVSREDEILRVARV 2054
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDK 151
V V V D NDNSP F Y +V + SS+ VSATD D +
Sbjct: 2055 IVQVQVEDVNDNSPQFVNLPYYAVVQ----------VEAQPGSSVFRVSATDKDYSRNGQ 2104
Query: 152 VAYKLAVPSNLVVIVPQTGELLLTGDPPSD--DVEYELTVEAHDLQSP 197
V Y L + P TGEL L +D + EY+L + A D P
Sbjct: 2105 VTYGLKEQHRNFQVHPVTGELTLKRAFEADLSNAEYKLILVATDGGFP 2152
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+ Y++ D +F+ P + + +SK+G + T +D E + YS + A+D+
Sbjct: 2842 LLTYNLDLTRDAGSFS--GPVSTTSVFAIDSKTG-WITTVSQMDHEACSSYSFEVVASDL 2898
Query: 87 KGIN--KAETHVTVDVLDENDNSPVFSQKVYR 116
+ + T VT+ V D NDN P+F +++YR
Sbjct: 2899 AELLPLSSTTVVTITVSDVNDNPPLFERELYR 2930
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 29/180 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YS + +D F + NP T GV++ T ++Q +V+ D+
Sbjct: 385 VNYSFSNPSDPMYFDI-NPLT-----------GVIMTTR---QLTRISQDFMVMEVVDM- 428
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
I++ T V + + D NDNSPVF++ Y V N +V + +V
Sbjct: 429 -ISEQRTSVQIQIEDANDNSPVFNKPFYNIAV-------NESVPVGTVVLVVSAVDDDKG 480
Query: 148 DGDKVAYKLAVPSNLVVIVPQ-TGELLLTGD---PPSDDVEYELTVEAHDLQSPSRYARE 203
+ V++ ++ +L + Q TGE+ +T D SDD+ Y V A D SP R E
Sbjct: 481 ENGYVSHTISGEQSLPFSIDQKTGEVRITRDLDFESSDDI-YTFAVRASDWGSPYRRESE 539
>gi|426340701|ref|XP_004034266.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 [Gorilla
gorilla gorilla]
Length = 3287
Score = 57.8 bits (138), Expect = 7e-06, Method: Composition-based stats.
Identities = 80/280 (28%), Positives = 117/280 (41%), Gaps = 53/280 (18%)
Query: 42 ALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDV 100
AL N + E+ S + +SG L+ T+ +DRE + ++ L +TA D A T V V V
Sbjct: 366 ALMNSRSLELF-SIDPQSG-LIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTV 423
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLA 157
D ND+SPVF Q YR +L NV ++ I + ATD D A Y+
Sbjct: 424 ADRNDHSPVFEQAQYR-------ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFV 473
Query: 158 VPSNLVV-------IVPQTGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVW 208
P I P++G + +G + +E YEL VEA D Q P P
Sbjct: 474 GPPAARAAAAAAFEIDPRSGLISTSGQVDREHMESYELVVEASDQGQEPG-----PRSAT 528
Query: 209 LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGR 262
++ + VL D AP EKR V + VRP R+ ++ D + G
Sbjct: 529 VRVHITVL---------DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGL 579
Query: 263 IVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ + + R F I G+++V DFE
Sbjct: 580 VHYNIISGNSRGHFAID--------SLTGEIQVVAPLDFE 611
Score = 55.8 bits (133), Expect = 3e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 489 DPRSG-LISTSGQVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 547
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 548 KRY---VAQVREDV-------RPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDS 597
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 598 LTGEIQVVA--PLDFEAEREYALRIRAQDAGRP 628
Score = 42.0 bits (97), Expect = 0.39, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 30/179 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 1078 ENSIVGSVVA--QITAVDPDEGPNAHIMYQIVEGNIPELFQM------------DIFSGE 1123
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIV 119
L D+D E +Y +V+ AT +++A HV + +D+NDNSPV + Q ++ V
Sbjct: 1124 LTALI-DLDYEARQEYVIVVQATSAPLVSRATVHVRL--VDQNDNSPVLNNFQILFNNYV 1180
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
+ + S + IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1181 SNRSDTFPSGI--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1231
Score = 41.2 bits (95), Expect = 0.59, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y
Sbjct: 711 SGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHL------- 763
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
LN + + +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 764 RLNEDAA---VGTSVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLD 820
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 821 YKQERYFKLVLTASD 835
Score = 40.8 bits (94), Expect = 0.77, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 565 LRVTATDRDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVVA-PLDFE 611
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y+L I A D ++ ++ V+D ND+ P+F ++ V + + L +V
Sbjct: 612 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLE-NAPLGHSV 670
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKLA--VPSNLVVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L P VI TG + ++G + VE Y
Sbjct: 671 IH------IQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYFF 724
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 725 GVEARDHGSP 734
Score = 40.0 bits (92), Expect = 1.7, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 87/218 (39%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 981 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1028
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V+ Y L A D +G+ T V+ V+ D NDN+PVF + + V + NS V
Sbjct: 1029 AVSVYELTAYAVD-RGVPPLRTPVSFQVMVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1082
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1083 G-----SVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1137
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 1138 YVIVVQATSAPLVSRATVHVRLVDQNDNSPVLNNFQIL 1175
Score = 38.5 bits (88), Expect = 4.6, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 22/177 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKV 114
++ SG + + + +D E+ Y+L ITA D KA+T +V V V D NDN+P F
Sbjct: 907 DADSGAITLQA-PLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASH 965
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN---LVVIVPQ 168
Y +V + F+S+ +SATD D +V Y + I P
Sbjct: 966 YTGLVSE----------DAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPT 1015
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQL 221
+G + + V YELT A D P QV +Q N+PV E+
Sbjct: 1016 SGIVRTVRRLDREAVSVYELTAYAVDRGVPPLRTPVSFQVMVQDVNDNAPVFPAEEF 1072
Score = 38.1 bits (87), Expect = 5.3, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ GT V + V + + + + Y IT GN + FA+ ++ GV
Sbjct: 767 EDAAVGTSV----VSVTAVDRDANSAISYQITGGNTRNRFAI------------STQGGV 810
Query: 62 LLVTSG-DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +D ++ + LV+TA+D + ++ +V +++ D N + PVF Y V
Sbjct: 811 GLVTLALPLDYKQERYFKLVLTASD-RALHD-HCYVHINITDANTHRPVFQSAHYSVSVN 868
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPP 179
+ + S+I +SA+D D G+ + NL +T P
Sbjct: 869 EDRPV----------GSTIVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAP 918
Query: 180 ---SDDVEYELTVEAHDLQSPSR 199
D V Y L + A D P +
Sbjct: 919 LDYEDQVTYTLAITARDNGIPQK 941
>gi|291239827|ref|XP_002739825.1| PREDICTED: Cadherin-23-like [Saccoglossus kowalevskii]
Length = 3451
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 127/309 (41%), Gaps = 45/309 (14%)
Query: 1 MENSKSGTGVKGLPILVASSHK-HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKS 59
+EN+ GT L +L AS + + Y IT GN + F + +S
Sbjct: 989 LENATRGTS---LIVLSASDGDIGTNADINYFITHGNQDGKFQIH------------FQS 1033
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFI 118
G L+ TS +DRE V +Y+L I A D K T +VTV+VLD NDN P+F++ Y
Sbjct: 1034 G-LVQTSAFLDREVVEEYNLTIEAIDNGVYAKTGTCYVTVNVLDINDNRPIFTESNYDVT 1092
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPS--NLVVIVPQTGELLLTG 176
V + NV+ ++ ++ A + K+ Y + + N VI G++
Sbjct: 1093 VME-------NVTQDYTIVTVHALDADIGENAKITYAIIAGNTQNSFVIDSNYGDIRRNE 1145
Query: 177 DPPSDDVE--YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHR 234
P + E Y LTVEA + S F S V + + D K
Sbjct: 1146 QPLDRETEESYILTVEASNNDSN------------MFRSQVRVSMMVYDVNDEKPVFTQS 1193
Query: 235 IEKR--RVTRAVRPTKRIDFSETDGEME--GRIVFALEKETEREKFKIRDENPWITVDEN 290
+ R A + T I S D ++ GR+V+++ + ++F I IT D
Sbjct: 1194 VYYRPDLSESAGKGTSVILVSAEDPDLSDGGRVVYSITAGNDMDEFSIDSSTGLITTDAA 1253
Query: 291 GDVRVKKRW 299
D K +
Sbjct: 1254 LDYETKNNY 1262
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 99/221 (44%), Gaps = 36/221 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
L T +D E +Y L I A+D G N T + + VLD ND +P+F+ +Y+F V +
Sbjct: 2403 LTTVSSLDHESRPEYLLTIEASDEDG-NVGTTQLYIRVLDTNDQAPLFAITLYQFSVKE- 2460
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDADG----DKVAYKL--AVPSNLVVIVPQTGELLLTG 176
N +V S +G V ATD+D K+ Y + P N + TG +L+
Sbjct: 2461 ----NESVG-----SLVGQVVATDSDSVMEHSKIFYHIINGNPDNDFYLNENTGVVLINK 2511
Query: 177 DPPSDD-VEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRI 235
+ YEL +EA ++ + + V L + V ++ + D EAP
Sbjct: 2512 QLNRESRAMYELEIEARNVADGIQ-----SNVTLYDLATV-----IISIEDINDEAP-MF 2560
Query: 236 EKRRVTRAVRPTKRIDFS-------ETDGEMEGRIVFALEK 269
K++ +R + ++ID S + D G + +A+E+
Sbjct: 2561 TKQQYSRRILENEQIDTSIITVTAVDFDDGTNGEVYYAIEE 2601
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 111/263 (42%), Gaps = 55/263 (20%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYR 116
++ V+++ +D E QY L I A + I + T V + +++ENDN P+FS +
Sbjct: 396 EADVIILVDHPLDYETAVQYQLYIYANETADITHFDMTRVRITLINENDNRPIFSSQS-- 453
Query: 117 FIVGDLKSSL--NSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTG 170
I D+K L SNV+ V+ATD D GD + Y ++ ++
Sbjct: 454 -ITVDVKEDLPVGSNVTM---------VTATDDDIGIYGD-ITYTISGADQFII----DA 498
Query: 171 ELLLTGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWLQF-----NSPVLQDEQL 221
EL + S D E Y+LTV A D +P+ + +V + N PV +D +
Sbjct: 499 ELGVISLIQSIDYELSLRYQLTVRAEDGGNPAE--ADNTRVIINVIDVNDNPPVFKD--I 554
Query: 222 LQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDE 281
Q + + P VT S+ D M G I+++ + F I
Sbjct: 555 RQTVYIAEDQPIDTVIGNVTA----------SDLDFGMNGDIIYSFISGNTDDVFSIG-- 602
Query: 282 NPWITVDENGDVRVKKRWDFEEL 304
+G++ +KK D+++L
Sbjct: 603 ------LFDGEILIKKELDYDDL 619
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 85/201 (42%), Gaps = 31/201 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y+IT GN + +F +K + EI + +DRE + Y L + A+D +
Sbjct: 696 IDYNITDGNIDGSFNMKRVGSGEI------------ILERQLDRENIDMYGLTVIASD-R 742
Query: 88 GI--NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
GI + A +VT+ V D NDN P++ + Y ++++ +V + + ++ A
Sbjct: 743 GIPRHSAVCYVTIIVRDVNDNDPIWIDEPYM-------TTISEDVDNGTYVFQVSAIDAD 795
Query: 146 DADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSPSRYAR 202
+ Y++ P V ++ T D P D + E+ + D P R +
Sbjct: 796 IGSNQLLVYEIN-PFTPYFKVDSASGVITTTDVPLDREMNTAQEIILTVKDSGRPLRRSS 854
Query: 203 EPAQVWLQF-----NSPVLQD 218
A V + N PV +D
Sbjct: 855 HSAIVHVTVLDINDNVPVFED 875
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS 111
+DRE Y ++TA D+ G+N + + V+++D NDNSPVF+
Sbjct: 1797 LDREAENIYRFLVTAIDIGGLNSS-AEIVVNIVDVNDNSPVFT 1838
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 45/94 (47%), Gaps = 18/94 (19%)
Query: 68 DIDREEVAQ-YSLVITATDVKGI------NKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
++D +++ Q Y L I A D +G+ A VTV V+D NDNSPVF VY+F V
Sbjct: 613 ELDYDDLYQVYILEILAHD-QGVPVDPATGSATATVTVSVIDVNDNSPVFEYTVYQFAVS 671
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAY 154
+ +IG + ATD D AY
Sbjct: 672 E----------EADPGITIGMIRATDMDSTTNAY 695
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 66 SGDIDREEVAQYSLVITATD----VKGINKAETHVTVDVLDENDNSPVFSQKVY 115
SG +DRE + Y L +TA D + T + V +LDEND P F+Q +Y
Sbjct: 1682 SGSLDRETTSMYILTVTAKDNPENPTNARRDGTELIVTLLDENDQIPTFTQSLY 1735
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 27/176 (15%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH------VTVDVLDENDNSPVFSQ 112
SG + V +G +DRE V+ + L I+A D+ H V++ +LD NDN PVF
Sbjct: 2009 SGTVQV-AGILDRENVSVFQLTISAVDLSSQYNGSRHSNPNAEVSIHLLDVNDNDPVFQP 2067
Query: 113 KVYRFIVGDL--KSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSN----LVVI 165
+I L +S L++ V+ + +A D D G + + + N L +
Sbjct: 2068 PGLEYIHEQLVEQSPLDTVVTTF---------TALDRDKGLQGMVRYEIVDNKTDLLQIS 2118
Query: 166 VPQTGELLLTGDPPSDDVEY-ELTVEAHDLQSPSRYAREPAQV---WLQFNSPVLQ 217
P G + + G + ++ TV+A D +P RY++ P V L N+P+ +
Sbjct: 2119 DPAVGVITVNGVVDREIYQWLNFTVKAWDFGNPPRYSQIPVFVEILELNDNNPIFR 2174
>gi|119585318|gb|EAW64914.1| cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog,
Drosophila) [Homo sapiens]
Length = 3037
Score = 57.8 bits (138), Expect = 7e-06, Method: Composition-based stats.
Identities = 80/280 (28%), Positives = 117/280 (41%), Gaps = 53/280 (18%)
Query: 42 ALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDV 100
AL N + E+ S + +SG L+ T+ +DRE + ++ L +TA D A T V V V
Sbjct: 91 ALMNSRSLELF-SIDPQSG-LIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTV 148
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLA 157
D ND+SPVF Q YR +L NV ++ I + ATD D A Y+
Sbjct: 149 ADRNDHSPVFEQAQYR-------ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFV 198
Query: 158 VPSNLVV-------IVPQTGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVW 208
P I P++G + +G + +E YEL VEA D Q P P
Sbjct: 199 GPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSAT 253
Query: 209 LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGR 262
++ + VL D AP EKR V + VRP R+ ++ D + G
Sbjct: 254 VRVHITVL---------DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGL 304
Query: 263 IVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ + + R F I G+++V DFE
Sbjct: 305 VHYNIISGNSRGHFAID--------SLTGEIQVVAPLDFE 336
Score = 55.5 bits (132), Expect = 4e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 214 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 272
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 273 KRY---VAQVREDV-------RPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDS 322
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 323 LTGEIQVVA--PLDFEAEREYALRIRAQDAGRP 353
Score = 42.4 bits (98), Expect = 0.33, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 30/179 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 803 ENSIVGSVVA--QITAVDPDEGPNAHIMYQIVEGNIPELFQM------------DIFSGE 848
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIV 119
L D+D E +Y +V+ AT +++A HV + +D+NDNSPV + Q ++ V
Sbjct: 849 LTALI-DLDYEARQEYVIVVQATSAPLVSRATVHVRL--VDQNDNSPVLNNFQILFNNYV 905
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
+ + S + IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 906 SNRSDTFPSGI--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 956
Score = 41.6 bits (96), Expect = 0.50, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y
Sbjct: 436 SGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHL------- 488
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
LN + + +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 489 RLNEDAA---VGTSVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLD 545
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 546 YKQERYFKLVLTASD 560
Score = 41.6 bits (96), Expect = 0.53, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 706 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 753
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V+ Y L A D +G+ T V++ V+ D NDN+PVF + + V + NS V
Sbjct: 754 AVSVYELTAYAVD-RGVPPLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKE-----NSIV 807
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 808 G-----SVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 862
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 863 YVIVVQATSAPLVSRATVHVRLVDQNDNSPVLNNFQIL 900
Score = 41.2 bits (95), Expect = 0.65, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 290 LRVTATDRDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVVA-PLDFE 336
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y+L I A D ++ ++ V+D ND+ P+F ++ V + + L +V
Sbjct: 337 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLE-NAPLGHSV 395
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKLA--VPSNLVVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L P VI TG + ++G + VE Y
Sbjct: 396 IH------IQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYFF 449
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 450 GVEARDHGSP 459
Score = 38.9 bits (89), Expect = 3.0, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 22/177 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKV 114
++ SG + + + +D E+ Y+L ITA D KA+T +V V V D NDN+P F
Sbjct: 632 DADSGAITLQA-PLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASH 690
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN---LVVIVPQ 168
Y +V + F+S+ +SATD D +V Y + I P
Sbjct: 691 YTGLVSE----------DAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPT 740
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQL 221
+G + + V YELT A D P QV +Q N+PV E+
Sbjct: 741 SGIVRTVRRLDREAVSVYELTAYAVDRGVPPLRTPVSIQVMVQDVNDNAPVFPAEEF 797
Score = 38.5 bits (88), Expect = 4.1, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ GT V + V + + + + Y IT GN + FA+ ++ GV
Sbjct: 492 EDAAVGTSV----VSVTAVDRDANSAISYQITGGNTRNRFAI------------STQGGV 535
Query: 62 LLVTSG-DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +D ++ + LV+TA+D + ++ +V +++ D N + PVF Y V
Sbjct: 536 GLVTLALPLDYKQERYFKLVLTASD-RALHD-HCYVHINITDANTHRPVFQSAHYSVSVN 593
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPP 179
+ + S+I +SA+D D G+ + NL +T P
Sbjct: 594 EDRP----------MGSTIVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAP 643
Query: 180 ---SDDVEYELTVEAHDLQSPSR 199
D V Y L + A D P +
Sbjct: 644 LDYEDQVTYTLAITARDNGIPQK 666
>gi|392334116|ref|XP_003753085.1| PREDICTED: protocadherin beta-4 [Rattus norvegicus]
gi|392354640|ref|XP_001055294.3| PREDICTED: protocadherin beta-4 [Rattus norvegicus]
gi|149017294|gb|EDL76345.1| rCG49430 [Rattus norvegicus]
Length = 798
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 70/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT +D+ H +TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTESPLDRESRAEYNITITVSDLGTPRLTTQHTITVQVSDINDNAPAFTQTSYTMFVHE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSN-------LVVIVPQTGE 171
NS H IG++SATD+D + Y L P N L+ I P G+
Sbjct: 463 ----NNSPALH------IGTISATDSDSGSNAHITYSLLPPQNPQLALTSLISINPDNGQ 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + V+ +E V A D SP+
Sbjct: 513 LFALRALDYEAVQAFEFHVGASDGGSPA 540
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 45 NPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLD 102
NP H + RN++E K LV +DREE A+ SL + A D ++ T V + ++D
Sbjct: 175 NPHFHVLTRNNSEGKKYPELVQDRALDREEQAELSLTLMALDGGSPPRSGTALVQILIMD 234
Query: 103 ENDNSPVFSQKVY 115
NDN+P F Y
Sbjct: 235 INDNAPEFVNSPY 247
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 76/177 (42%), Gaps = 31/177 (17%)
Query: 28 VRYSITQGND--NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
V Y + Q +D TF++ N T EIR E +D E++ Y + I ATD
Sbjct: 277 VSYGLFQASDEIKKTFSI-NKVTGEIRLKKE------------LDFEKIKSYHVKIEATD 323
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G++ V ++VLD NDN+P + L SS+ N + SI V
Sbjct: 324 GGGLS-GRGSVMIEVLDVNDNAP-------ELTISSLTSSVPENAP--ETIISIFRVGDR 373
Query: 146 DADGDKVAYKLAVPSNLVVIVPQTGE--LLLTGDPPSD---DVEYELTVEAHDLQSP 197
D+ G+ ++ NL ++ T + L + P D EY +T+ DL +P
Sbjct: 374 DS-GENGKVVCSISENLPFLLKSTFKNFYTLVTESPLDRESRAEYNITITVSDLGTP 429
>gi|395504756|ref|XP_003756713.1| PREDICTED: protocadherin beta-16-like [Sarcophilus harrisii]
Length = 792
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 56/101 (55%), Gaps = 14/101 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE AQY+++IT TD+ K+E ++TV + D NDN PVF+Q Y
Sbjct: 403 LVTEGALDRENKAQYNVMITVTDLGFPRLKSEYNITVFISDVNDNPPVFTQTEYTLY--- 459
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP 159
LK + NS H +GSVSA D D KV Y L P
Sbjct: 460 LKEN-NSPAFH------LGSVSANDRDSGTNAKVTYSLQPP 493
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVY 115
LV +DREE +++L++TA D ++ T V + VLD NDN+P+F+Q Y
Sbjct: 194 LVLIKTLDREEQPEFTLILTAIDGGSPPRSGTTRVRIAVLDINDNAPIFTQPQY 247
>gi|358413166|ref|XP_003582483.1| PREDICTED: protocadherin gamma-B6-like [Bos taurus]
Length = 814
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT GD+DRE+ +Y++ ITATD K + T +T+ + D NDN+PVF Q Y VG+
Sbjct: 404 LVTDGDLDREQTLEYNVTITATDRGKPPLSSSTTITLCITDINDNAPVFHQASYIVHVGE 463
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVP-------SNLVVIVPQTGE 171
+ +SI VSA+D D V+Y + S+ V + PQ+G
Sbjct: 464 ----------NNPPGASIAQVSASDPDLGPNGYVSYSIVASDLEPRALSSYVSVNPQSGV 513
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
+ + + +ELT++A D SP+
Sbjct: 514 VFAQRAFDHEQLRVFELTLQARDHGSPA 541
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DREE +SL++TA D ++ T + + V D NDN PVFSQ YR V +
Sbjct: 200 LDREEQRSHSLILTALDGGDPARSATAQIEISVKDTNDNPPVFSQDEYRLSVSE------ 253
Query: 128 SNVSHWKKFSSIGSVSATDAD 148
+ SS+ V+ATD D
Sbjct: 254 ----NLPPGSSVLLVTATDQD 270
>gi|300794761|ref|NP_001178634.1| protocadherin Fat 4 [Rattus norvegicus]
Length = 4979
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 74/153 (48%), Gaps = 28/153 (18%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ V+YSI+ G+ + R +KSGV+ T +DREE Y L I A
Sbjct: 720 PNGTVKYSISAGDRS-------------RFQIHAKSGVI-STKMALDREEKTAYQLQIVA 765
Query: 84 TDVKGI-NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
TD + + ++ VTV VLD DN PVFSQ Y F+V + NV+ +GSV
Sbjct: 766 TDGGNLQSPSQAIVTVTVLDTQDNPPVFSQAAYSFVVFE-------NVALGYH---VGSV 815
Query: 143 SATDAD-GDKVAYKLAVPS--NLVVIVPQTGEL 172
SAT D ++Y + + + P TG+L
Sbjct: 816 SATTMDLNANISYLITTGDQRGMFAMNPVTGQL 848
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ YSL + ATD KG + T V V VLD NDN+PVF+Q +YR
Sbjct: 2109 TGELDREEVSNYSLTVVATD-KGQPPLSSSTEVVVMVLDINDNNPVFAQAMYR 2160
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 75/174 (43%), Gaps = 29/174 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ NP T + L T+ IDREE + Y L + A+
Sbjct: 826 ISYLITTGDQRGMFAM-NPVTGQ------------LTTASVIDREEQSFYQLRVVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G + V + V D NDN+P F Q V S+++ V +W+ SI A D
Sbjct: 871 GAVTGDAVVNITVKDLNDNAPHFLQAV---------ESIDA-VENWQAGHSIFQAKAVDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSP 197
D +V Y L P NL I Q G + L G Y++ + A D+ P
Sbjct: 921 DEGVNGRVLYSLKQNPKNLFTINEQNGNISLLGTLDVHAGSYQVEIVASDMGVP 974
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 31/176 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN +F + N T EIR+ +DRE+++ Y L + +
Sbjct: 2699 PNGQLAYEIVNGNQESSFTI-NHATGEIRSIRP------------LDREKISYYELTVKS 2745
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D KG T V V VLDENDN+P FSQ ++ S NS + + ++
Sbjct: 2746 SD-KGSPSQSTSVKVIISVLDENDNAPRFSQIFSAYV------SENSPLGY-----TVTR 2793
Query: 142 VSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ +D D A Y +A + I P TG+++++ +D + Y + V AHD
Sbjct: 2794 VTTSDEDIGINAISRYSIADTALPFTINPNTGDIVISRPLNREDTDRYRIRVSAHD 2849
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 82/184 (44%), Gaps = 38/184 (20%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+ YSI +GN+ F++ R S + V LV G +D E YSL+I A D
Sbjct: 1244 LIHYSILKGNEERQFSID-------RFSGQ----VTLV--GKLDYEATPAYSLLIQAVDS 1290
Query: 87 KGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVSA 144
+ T +++D+LDENDN+P F KS+L +V + + SV+A
Sbjct: 1291 GTVPLNSTCTLSIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVTA 1339
Query: 145 TDADGDKVA---YKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQ 195
TD+D A Y + +N I P TG + L D E Y+L + A D
Sbjct: 1340 TDSDSGVNADLHYTITGSNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQG 1396
Query: 196 SPSR 199
P R
Sbjct: 1397 RPPR 1400
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 83/195 (42%), Gaps = 40/195 (20%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVL-LVTSGDIDREEVAQYSLVITATDVKG 88
Y I +GN+ F L +I + + L LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIVRGNEAGRFRL------DITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KG 226
Query: 89 INKAETH--VTVDVLDENDNSPVFSQKVYR------FIVGDLKSSLNSNVSHWKKFSSIG 140
K + V V V D NDN PVF Y+ +VG SS+
Sbjct: 227 EPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVG----------------SSVL 270
Query: 141 SVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDL 194
V+A DAD + Y+L + P+TG L+T P D +Y LTV+A D
Sbjct: 271 QVAAADADEGTNADIRYRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTVQATDR 328
Query: 195 QSPSRYAREPAQVWL 209
PS R A + L
Sbjct: 329 GVPSLTGRAEALIQL 343
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 35/177 (19%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+ Y+I+ GN+ FA+ S +GV+ + +D E +++ + I+ATD
Sbjct: 3123 LISYNISSGNEEGIFAIN------------SSTGVVTLAKA-LDYELSSKHEMTISATDG 3169
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + +TV V+D NDNSPVF + V + S + V H ++AT
Sbjct: 3170 GWVARTGYCSLTVSVIDVNDNSPVFVPDEFFPTVMENAPS-GTTVIH---------LNAT 3219
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
DAD +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 3220 DADSGANAVIAYTVQSSDSDLFVIDPNTGVITTQG---FLDFETKQSYHLTVKAFNV 3273
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y++ G D+ +F + + +SG L+ T
Sbjct: 1754 GDGSKIMQLTAMDADEGANALVTYALISGADD-SFRI------------DPESGDLIATK 1800
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + + D ND++P FS+ VY F
Sbjct: 1801 -RLDREHRSKYSLLVRADD--GLQSSDMRINITISDVNDHTPRFSRPVYSF 1848
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVF 110
L T +DREE A Y L+I ATD+ ++ T V V +LD NDNSPVF
Sbjct: 641 LSTISSLDREEQAFYCLLILATDLGSPPQSSTVQVNVSLLDINDNSPVF 689
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 76/172 (44%), Gaps = 34/172 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+ SG +DRE+ + SL + A + ++G + E V + VLD ND PVFS YR +
Sbjct: 3355 IYVSGLLDREKEERVSLKVLAKNFGNIRGADIDEVTVNITVLDAND-PPVFSLNTYRVQI 3413
Query: 120 GD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLVVIVPQ 168
+ S+ +S+ + W +FS IGS + A I PQ
Sbjct: 3414 SEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGA---------------FSINPQ 3458
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
TG++ +T + + Y LTV A D +PS V L+ N PVL
Sbjct: 3459 TGQITVTSGLDRESLPVYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPVL 3510
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 32/139 (23%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
+ Y+IT GN F + G L + S ++DRE +Y L++ A+D
Sbjct: 1031 IAYAITDGNSGEAFGIF-------------PDGQLYIKS-ELDRELQDRYVLLVVASDRA 1076
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
V+ ++ A +VTV + D NDN P+F+ Y F + + S +G VSA
Sbjct: 1077 VEPLS-ATVNVTVILEDVNDNRPLFNSTNYTFYFEE----------EQRAGSFVGKVSAV 1125
Query: 146 DAD----GD-KVAYKLAVP 159
D D G+ + A+++A P
Sbjct: 1126 DKDFGPNGEVRYAFEVAQP 1144
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 14/87 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYSI GN F + +E V +G +DRE +Q L I+A D +
Sbjct: 510 LRYSIVSGNGLGWFHI-----------SEHSGLVTTSAAGGLDRELASQIVLNISARD-Q 557
Query: 88 GINKAETH--VTVDVLDENDNSPVFSQ 112
G++ ++ + V VLD ND PVFSQ
Sbjct: 558 GVHPKVSYAQLVVSVLDVNDQKPVFSQ 584
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + + A + + + VRY I GN + F + +S +G
Sbjct: 2165 ENTLTGTDI--IQVSAADNDEGTNGQVRYGIVGGNTHQEFRI------------DSVTGA 2210
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
+ V +DRE + Y L + ATD + ++ V + +LD ND PVF Y
Sbjct: 2211 ITVAK-SLDRETIPAYILTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPY 2264
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 125/308 (40%), Gaps = 59/308 (19%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
MEN G+ V L V + + + YSI G+ FA+ K G
Sbjct: 1954 MENLPLGSTV--LVFNVTDADDGVNSQLSYSIASGDSLGQFAVD-------------KHG 1998
Query: 61 VLLVTSGDIDREEVAQYSLVITATDV----KGINKAETHVTVDVLDENDNSPVFSQKVYR 116
VL +DRE + Y+LVI D+ + V++ +LD NDN P+F
Sbjct: 1999 VLKALKA-LDRESQSFYNLVIQVHDLPQPPASRFTSTAQVSIILLDVNDNPPMF------ 2051
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSV----SATDADG---DKVAYKLAVPS-NLVVIVPQ 168
L+ +++ + + I +V ATD D + Y L P+ N I
Sbjct: 2052 ---------LSPKLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPAGNKFSIGTI 2102
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVWLQF--NSPVLQDEQLLQM 224
GE+ LTG+ ++V Y LTV A D Q P + E + L N+PV
Sbjct: 2103 DGEVHLTGELDREEVSNYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVF-------- 2154
Query: 225 IDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPW 284
++A +R++ + T ++ ++ D G++ + + ++F+I
Sbjct: 2155 ----AQAMYRVQIKENTLTGTDIIQVSAADNDEGTNGQVRYGIVGGNTHQEFRIDSVTGA 2210
Query: 285 ITVDENGD 292
ITV ++ D
Sbjct: 2211 ITVAKSLD 2218
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L ++ + P+ + Y + GN+++ FAL + SG L VT +DRE
Sbjct: 2280 LQVVARDDDQGPNSQLSYVLLGGNEDNAFAL-------------TASGELRVTQ-SLDRE 2325
Query: 73 EVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
+ LV+TA D T + + V D NDN P F+ +Y
Sbjct: 2326 ARDHFVLVVTAADAGSPALTGTGTINIIVDDINDNVPTFASNMY 2369
>gi|395504706|ref|XP_003756688.1| PREDICTED: protocadherin beta-2-like [Sarcophilus harrisii]
Length = 788
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 79/160 (49%), Gaps = 22/160 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT D+ K+E ++TV + D NDN P+FS++ Y+ + +
Sbjct: 403 LVTEGALDREYKAEYNITITVMDLGSPRLKSEYNLTVLISDVNDNPPMFSERTYKVCLQE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPS-------NLVVIVPQTGE 171
NS H IGSVSA+D D KV Y L P + + I G
Sbjct: 463 ----NNSPALH------IGSVSASDRDSGINAKVTYSLLPPEPDDLPLFSYISINSDNGY 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ 210
L + ++ ++ TV A D SPS ++ Q+ +Q
Sbjct: 513 LYALRSLDYEAIQAFQFTVRAADGGSPSLSSQVLVQIVVQ 552
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 13/114 (11%)
Query: 38 NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI--NKAETH 95
N+T + + +IR+S+E K LV +DREE ++ +L +TA D G+
Sbjct: 169 NYTISPNSLFHIQIRDSSEGKRYPELVLDETLDREEQSEVTLTLTAVD-GGVPPRSGTAQ 227
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
V + V+D NDN+PVF+Q Y + + NS++ S I +VSATD D
Sbjct: 228 VRILVVDINDNAPVFAQLRYEVQIPE-----NSSIG-----SKIVTVSATDLDA 271
>gi|354495052|ref|XP_003509646.1| PREDICTED: protocadherin Fat 4 [Cricetulus griseus]
Length = 4981
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 118/279 (42%), Gaps = 62/279 (22%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ V+YSI+ G+ + R +KSGV+ T +DREE Y L I A
Sbjct: 720 PNGTVQYSISAGDRS-------------RFQINAKSGVI-STRMALDREEKTAYQLQIVA 765
Query: 84 TDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
TD + + VTV VLD DN PVFSQ Y F+V + NV+ +GSV
Sbjct: 766 TDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAYSFVVFE-------NVALGYH---VGSV 815
Query: 143 SATDAD-GDKVAYKLAVPS--NLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSR 199
SAT D ++Y + + + P TG+L T D + S
Sbjct: 816 SATTMDLNANISYLITTGDQRGMFAMNPVTGQL--------------TTASVIDREEQSF 861
Query: 200 YAREPAQVWLQFNSPVLQDEQLLQMI--DRKSEAPH---------RIEKRRVTRAVRPTK 248
Y Q+ + + + + L+ + D APH +E + ++ K
Sbjct: 862 Y-----QLRVVASGGAVTGDTLVNITVKDLNDNAPHFLQAVESINAVENWQAGHSIYQAK 916
Query: 249 RIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
+D D + GR++++L K+ + F I ++N I++
Sbjct: 917 AMD---PDEGVNGRVLYSL-KQNPKNLFAINEQNGNISL 951
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 76/174 (43%), Gaps = 29/174 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ NP T + L T+ IDREE + Y L + A+
Sbjct: 826 ISYLITTGDQRGMFAM-NPVTGQ------------LTTASVIDREEQSFYQLRVVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V D NDN+P F Q V S+N+ V +W+ SI A D
Sbjct: 871 GAVTGDTLVNITVKDLNDNAPHFLQAV---------ESINA-VENWQAGHSIYQAKAMDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSP 197
D +V Y L P NL I Q G + L G Y+L + A D+ P
Sbjct: 921 DEGVNGRVLYSLKQNPKNLFAINEQNGNISLLGALDVHAGSYQLEILASDMGVP 974
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ YSL + ATD KG + T V V VLD NDN+PVFSQ VYR
Sbjct: 2109 TGELDREEVSNYSLTVVATD-KGQPPLSSSTEVVVMVLDINDNNPVFSQAVYR 2160
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+ YSI +GN+ FA+ R S + V L+ G +D E YSL+I A D
Sbjct: 1244 LIHYSILKGNEERQFAID-------RFSGQ----VTLI--GKLDYEATPAYSLLIQAVDS 1290
Query: 87 KGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVSA 144
I+ T +++D+LDENDN+P F KS+L +V + + SV+A
Sbjct: 1291 GAISLNSTCTLSIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVTA 1339
Query: 145 TDADGDKVA---YKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQ 195
TD+D A Y + +N I P TG + L D E Y+L + A D
Sbjct: 1340 TDSDSGVNADLHYTITGSNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQG 1396
Query: 196 SPSR 199
P R
Sbjct: 1397 RPPR 1400
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 85/177 (48%), Gaps = 35/177 (19%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+RY I+ GN+ FA+ S +GVL + +D E +++ + I+ATD
Sbjct: 3125 LIRYDISSGNEEGIFAIN------------SSTGVLTLAKA-LDYELCSKHEMTISATDG 3171
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + +TV+V+D NDNSPVF + V + S + V H ++AT
Sbjct: 3172 GWVARTGSCSLTVNVIDVNDNSPVFVPDEFFPTVMENAPS-GTTVIH---------LNAT 3221
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
DAD +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 3222 DADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQG---FLDFETKQSYHLTVKAFNV 3275
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 31/176 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN ++F + N T EIR+ +DRE+++ Y L + +
Sbjct: 2701 PNGQLDYEIVNGNKENSFTI-NHATGEIRSIRP------------LDREKMSHYELTVKS 2747
Query: 84 TDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D KG T V +++LDENDN+P FSQ ++ S NS + + ++
Sbjct: 2748 SD-KGSPSQSTSVRVIINILDENDNAPRFSQIFSAYV------SENSPLGY-----TVTR 2795
Query: 142 VSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ +D D A Y +A S I P TG+++++ +D + Y + V AHD
Sbjct: 2796 VTTSDEDIGINAISRYSIADTSLPFTINPNTGDIVISRPLNREDTDRYRIRVSAHD 2851
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 82/194 (42%), Gaps = 38/194 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I +GN+ F L N + + + LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIVRGNEAGRFRLD-----ITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KGE 227
Query: 90 NKAETH--VTVDVLDENDNSPVFSQKVYR------FIVGDLKSSLNSNVSHWKKFSSIGS 141
K + V V V D NDN PVF Y+ +VG SS+
Sbjct: 228 PKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVG----------------SSVLQ 271
Query: 142 VSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQ 195
V+A DAD + Y+L + P+TG L+T P D +Y LTV+A D
Sbjct: 272 VAAADADEGTNADIRYRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTVQATDRG 329
Query: 196 SPSRYAREPAQVWL 209
PS R A + L
Sbjct: 330 VPSLTGRAEAIIQL 343
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y++ G D+ +F + + +SG L+ T
Sbjct: 1754 GDGSKIMQLTAMDADEGANALVTYALISGADD-SFRI------------DPESGDLIATR 1800
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + + D ND++P FS+ VY F
Sbjct: 1801 -RLDREHRSKYSLLVRADD--GLQSSDMRINITISDVNDHTPKFSRPVYSF 1848
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVF 110
L T +DREE A Y L++ ATD+ ++ T V V +LD NDNSPVF
Sbjct: 641 LSTISSLDREEQAFYCLLVLATDLGSPPQSSTAQVNVSLLDINDNSPVF 689
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 84/207 (40%), Gaps = 27/207 (13%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYSI GN F + +E V +G +DRE +Q L I+A D +
Sbjct: 510 LRYSIVSGNGLGWFHI-----------SEHSGLVTTSAAGGLDRELASQIVLNISARD-Q 557
Query: 88 GINKAETH--VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G++ ++ + V VLD ND PVFSQ + S+ N + +G+
Sbjct: 558 GVHPKVSYAQLVVTVLDVNDEKPVFSQPEGYTV------SVVENAPAGTELLVLGATDGD 611
Query: 146 DADGDKVAYKLAVPSN---LVVIVPQTGEL-LLTGDPPSDDVEYELTVEAHDLQSPSRYA 201
+D V + L + L + P +G L ++ + Y L V A DL SP + +
Sbjct: 612 LSDNGTVRFSLQEAESDQRLFRLDPVSGRLSTISSLDREEQAFYCLLVLATDLGSPPQSS 671
Query: 202 REPAQVWL---QFNSPVLQDEQLLQMI 225
V L NSPV Q I
Sbjct: 672 TAQVNVSLLDINDNSPVFYPVQYFAHI 698
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + + S + + VRY I GN + F + +S +G
Sbjct: 2165 ENTLTGTDI--IQVSATDSDEGTNGQVRYGIVGGNTHQEFRI------------DSVTGA 2210
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVY 115
+ V +DRE Y+L + ATD + + VT+ +LD ND PVF Y
Sbjct: 2211 ITVAK-TLDRETTPAYTLTVQATDRGSSPRTDVCTVTITLLDMNDFVPVFELSPY 2264
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 27/123 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
+ Y+IT GN F + G L + S ++DRE +Y L++ A+D
Sbjct: 1031 IAYTITDGNTGDAFGIF-------------PDGQLYIKS-ELDRELQERYVLLVVASDRA 1076
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
V+ ++ A +VTV + D NDN P+F+ Y F + + S +G VSA
Sbjct: 1077 VEPLS-ATVNVTVILEDVNDNRPLFNSTNYTFYFEE----------EQRAGSFVGKVSAV 1125
Query: 146 DAD 148
D D
Sbjct: 1126 DKD 1128
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 121/303 (39%), Gaps = 59/303 (19%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
MEN G+ V L V + + + YSI G+ FA+ K G
Sbjct: 1954 MENLPVGSTV--LVFNVTDADDGVNSQLSYSIASGDSLGQFAVD-------------KHG 1998
Query: 61 VLLVTSGDIDREEVAQYSLVITATDV----KGINKAETHVTVDVLDENDNSPVFSQKVYR 116
VL +DRE + Y+LVI D + V++ +LD NDN P+F
Sbjct: 1999 VLKTLKA-LDRESQSFYNLVIQVHDSPQPPASRFTSTAQVSIILLDVNDNPPMF------ 2051
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSV----SATDADG---DKVAYKLAVP-SNLVVIVPQ 168
L+ +++ + + I +V ATD D + Y L P N I
Sbjct: 2052 ---------LSPKLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTI 2102
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVWLQF--NSPVLQDEQLLQM 224
GE+ LTG+ ++V Y LTV A D Q P + E + L N+PV
Sbjct: 2103 DGEVHLTGELDREEVSNYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVF-------- 2154
Query: 225 IDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPW 284
S+A +R++ + T ++ +++D G++ + + ++F+I
Sbjct: 2155 ----SQAVYRVQIKENTLTGTDIIQVSATDSDEGTNGQVRYGIVGGNTHQEFRIDSVTGA 2210
Query: 285 ITV 287
ITV
Sbjct: 2211 ITV 2213
Score = 37.4 bits (85), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 28/155 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN++ GT V L + A S + + I GN+ F E++ S +
Sbjct: 369 ENAQVGTVVALLTVTDADS-PAANGNISVQILGGNEQRHF--------EVQRSKVPNLSL 419
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGI--------NKAETHVTVDVLDENDNSPVFSQK 113
+ V S +DRE + Y+L ++ +D G + + + V D ND+ PVF+Q+
Sbjct: 420 IKVASA-LDRERIPSYNLTVSVSDNSGAPPTAEVQARSSVASLVIFVNDINDHPPVFAQQ 478
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
VYR +L+ V S + VSATD D
Sbjct: 479 VYRV-------NLSEEVPPG---SYVSGVSATDGD 503
>gi|392338710|ref|XP_001070073.3| PREDICTED: protocadherin Fat 4 [Rattus norvegicus]
Length = 4981
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 74/153 (48%), Gaps = 28/153 (18%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ V+YSI+ G+ + R +KSGV+ T +DREE Y L I A
Sbjct: 720 PNGTVKYSISAGDRS-------------RFQIHAKSGVI-STKMALDREEKTAYQLQIVA 765
Query: 84 TDVKGI-NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
TD + + ++ VTV VLD DN PVFSQ Y F+V + NV+ +GSV
Sbjct: 766 TDGGNLQSPSQAIVTVTVLDTQDNPPVFSQAAYSFVVFE-------NVALGYH---VGSV 815
Query: 143 SATDAD-GDKVAYKLAVPS--NLVVIVPQTGEL 172
SAT D ++Y + + + P TG+L
Sbjct: 816 SATTMDLNANISYLITTGDQRGMFAMNPVTGQL 848
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ YSL + ATD KG + T V V VLD NDN+PVF+Q +YR
Sbjct: 2109 TGELDREEVSNYSLTVVATD-KGQPPLSSSTEVVVMVLDINDNNPVFAQAMYR 2160
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 75/174 (43%), Gaps = 29/174 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ NP T + L T+ IDREE + Y L + A+
Sbjct: 826 ISYLITTGDQRGMFAM-NPVTGQ------------LTTASVIDREEQSFYQLRVVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G + V + V D NDN+P F Q V S+++ V +W+ SI A D
Sbjct: 871 GAVTGDAVVNITVKDLNDNAPHFLQAV---------ESIDA-VENWQAGHSIFQAKAVDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSP 197
D +V Y L P NL I Q G + L G Y++ + A D+ P
Sbjct: 921 DEGVNGRVLYSLKQNPKNLFTINEQNGNISLLGTLDVHAGSYQVEIVASDMGVP 974
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 31/176 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN +F + N T EIR+ +DRE+++ Y L + +
Sbjct: 2701 PNGQLAYEIVNGNQESSFTI-NHATGEIRSIRP------------LDREKISYYELTVKS 2747
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D KG T V V VLDENDN+P FSQ ++ S NS + + ++
Sbjct: 2748 SD-KGSPSQSTSVKVIISVLDENDNAPRFSQIFSAYV------SENSPLGY-----TVTR 2795
Query: 142 VSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ +D D A Y +A + I P TG+++++ +D + Y + V AHD
Sbjct: 2796 VTTSDEDIGINAISRYSIADTALPFTINPNTGDIVISRPLNREDTDRYRIRVSAHD 2851
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 82/184 (44%), Gaps = 38/184 (20%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+ YSI +GN+ F++ R S + V LV G +D E YSL+I A D
Sbjct: 1244 LIHYSILKGNEERQFSID-------RFSGQ----VTLV--GKLDYEATPAYSLLIQAVDS 1290
Query: 87 KGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVSA 144
+ T +++D+LDENDN+P F KS+L +V + + SV+A
Sbjct: 1291 GTVPLNSTCTLSIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVTA 1339
Query: 145 TDADGDKVA---YKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQ 195
TD+D A Y + +N I P TG + L D E Y+L + A D
Sbjct: 1340 TDSDSGVNADLHYTITGSNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQG 1396
Query: 196 SPSR 199
P R
Sbjct: 1397 RPPR 1400
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 83/195 (42%), Gaps = 40/195 (20%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVL-LVTSGDIDREEVAQYSLVITATDVKG 88
Y I +GN+ F L +I + + L LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIVRGNEAGRFRL------DITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KG 226
Query: 89 INKAETH--VTVDVLDENDNSPVFSQKVYR------FIVGDLKSSLNSNVSHWKKFSSIG 140
K + V V V D NDN PVF Y+ +VG SS+
Sbjct: 227 EPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVG----------------SSVL 270
Query: 141 SVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDL 194
V+A DAD + Y+L + P+TG L+T P D +Y LTV+A D
Sbjct: 271 QVAAADADEGTNADIRYRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTVQATDR 328
Query: 195 QSPSRYAREPAQVWL 209
PS R A + L
Sbjct: 329 GVPSLTGRAEALIQL 343
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 84/177 (47%), Gaps = 35/177 (19%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+ Y+I+ GN+ FA+ S +GV+ + +D E +++ + I+ATD
Sbjct: 3125 LISYNISSGNEEGIFAIN------------SSTGVVTLAKA-LDYELSSKHEMTISATDG 3171
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + +TV V+D NDNSPVF + V + S + V H ++AT
Sbjct: 3172 GWVARTGYCSLTVSVIDVNDNSPVFVPDEFFPTVMENAPS-GTTVIH---------LNAT 3221
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
DAD +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 3222 DADSGANAVIAYTVQSSDSDLFVIDPNTGVITTQG---FLDFETKQSYHLTVKAFNV 3275
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y++ G D+ +F + + +SG L+ T
Sbjct: 1754 GDGSKIMQLTAMDADEGANALVTYALISGADD-SFRI------------DPESGDLIATK 1800
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + + D ND++P FS+ VY F
Sbjct: 1801 -RLDREHRSKYSLLVRADD--GLQSSDMRINITISDVNDHTPRFSRPVYSF 1848
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVF 110
L T +DREE A Y L+I ATD+ ++ T V V +LD NDNSPVF
Sbjct: 641 LSTISSLDREEQAFYCLLILATDLGSPPQSSTVQVNVSLLDINDNSPVF 689
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 76/172 (44%), Gaps = 34/172 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+ SG +DRE+ + SL + A + ++G + E V + VLD ND PVFS YR +
Sbjct: 3357 IYVSGLLDREKEERVSLKVLAKNFGNIRGADIDEVTVNITVLDAND-PPVFSLNTYRVQI 3415
Query: 120 GD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLVVIVPQ 168
+ S+ +S+ + W +FS IGS + A I PQ
Sbjct: 3416 SEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGA---------------FSINPQ 3460
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
TG++ +T + + Y LTV A D +PS V L+ N PVL
Sbjct: 3461 TGQITVTSGLDRESLPVYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPVL 3512
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 31/187 (16%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L ++ + P+ + Y + GN+++ FAL + SG L VT +DRE
Sbjct: 2280 LQVVARDDDQGPNSQLSYVLLGGNEDNAFAL-------------TASGELRVTQ-SLDRE 2325
Query: 73 EVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
+ LV+TA D T + + V D NDN P F+ +Y + +
Sbjct: 2326 ARDHFVLVVTAADAGSPALTGTGTINIIVDDINDNVPTFASNMYFTAIPE---------- 2375
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLLTG--DPPSDDVEYE 186
+ + V+A+DAD ++Y + ++ I P TG+++ + D + D Y
Sbjct: 2376 DAPTGTDVLLVNASDADAATNAVISYSIIGGNSQFTINPSTGQIITSALLDRETKD-NYT 2434
Query: 187 LTVEAHD 193
L V A D
Sbjct: 2435 LVVVASD 2441
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 32/139 (23%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
+ Y+IT GN F + G L + S ++DRE +Y L++ A+D
Sbjct: 1031 IAYAITDGNSGEAFGIF-------------PDGQLYIKS-ELDRELQDRYVLLVVASDRA 1076
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
V+ ++ A +VTV + D NDN P+F+ Y F + + S +G VSA
Sbjct: 1077 VEPLS-ATVNVTVILEDVNDNRPLFNSTNYTFYFEE----------EQRAGSFVGKVSAV 1125
Query: 146 DAD----GD-KVAYKLAVP 159
D D G+ + A+++A P
Sbjct: 1126 DKDFGPNGEVRYAFEVAQP 1144
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 14/87 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYSI GN F + +E V +G +DRE +Q L I+A D +
Sbjct: 510 LRYSIVSGNGLGWFHI-----------SEHSGLVTTSAAGGLDRELASQIVLNISARD-Q 557
Query: 88 GINKAETH--VTVDVLDENDNSPVFSQ 112
G++ ++ + V VLD ND PVFSQ
Sbjct: 558 GVHPKVSYAQLVVSVLDVNDQKPVFSQ 584
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + + A + + + VRY I GN + F + +S +G
Sbjct: 2165 ENTLTGTDI--IQVSAADNDEGTNGQVRYGIVGGNTHQEFRI------------DSVTGA 2210
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
+ V +DRE + Y L + ATD + ++ V + +LD ND PVF Y
Sbjct: 2211 ITVAK-SLDRETIPAYILTVQATDRGSSPRTDSCTVAITLLDMNDFVPVFELSPY 2264
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 125/308 (40%), Gaps = 59/308 (19%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
MEN G+ V L V + + + YSI G+ FA+ K G
Sbjct: 1954 MENLPLGSTV--LVFNVTDADDGVNSQLSYSIASGDSLGQFAVD-------------KHG 1998
Query: 61 VLLVTSGDIDREEVAQYSLVITATDV----KGINKAETHVTVDVLDENDNSPVFSQKVYR 116
VL +DRE + Y+LVI D+ + V++ +LD NDN P+F
Sbjct: 1999 VLKALKA-LDRESQSFYNLVIQVHDLPQPPASRFTSTAQVSIILLDVNDNPPMF------ 2051
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSV----SATDADG---DKVAYKLAVPS-NLVVIVPQ 168
L+ +++ + + I +V ATD D + Y L P+ N I
Sbjct: 2052 ---------LSPKLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPAGNKFSIGTI 2102
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVWLQF--NSPVLQDEQLLQM 224
GE+ LTG+ ++V Y LTV A D Q P + E + L N+PV
Sbjct: 2103 DGEVHLTGELDREEVSNYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVF-------- 2154
Query: 225 IDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPW 284
++A +R++ + T ++ ++ D G++ + + ++F+I
Sbjct: 2155 ----AQAMYRVQIKENTLTGTDIIQVSAADNDEGTNGQVRYGIVGGNTHQEFRIDSVTGA 2210
Query: 285 ITVDENGD 292
ITV ++ D
Sbjct: 2211 ITVAKSLD 2218
>gi|359067608|ref|XP_003586363.1| PREDICTED: protocadherin gamma-B6-like [Bos taurus]
Length = 814
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT GD+DRE+ +Y++ ITATD K + T +T+ + D NDN+PVF Q Y VG+
Sbjct: 404 LVTDGDLDREQTLEYNVTITATDRGKPPLSSSTTITLCITDINDNAPVFHQASYIVHVGE 463
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVP-------SNLVVIVPQTGE 171
+ +SI VSA+D D V+Y + S+ V + PQ+G
Sbjct: 464 ----------NNPPGASIAQVSASDPDLGPNGYVSYSIVASDLEPRALSSYVSVNPQSGV 513
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
+ + + +ELT++A D SP+
Sbjct: 514 VFAQRAFDHEQLRVFELTLQARDHGSPA 541
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DREE +SL++TA D ++ T + + V D NDN PVFSQ YR V +
Sbjct: 200 LDREEQRSHSLILTALDGGDPARSATAQIEISVKDTNDNPPVFSQDEYRLSVSE------ 253
Query: 128 SNVSHWKKFSSIGSVSATDAD 148
+ SS+ V+ATD D
Sbjct: 254 ----NLPPGSSVLLVTATDQD 270
>gi|340708971|ref|XP_003393090.1| PREDICTED: cadherin-related tumor suppressor-like [Bombus terrestris]
Length = 5085
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 103/245 (42%), Gaps = 48/245 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+ +G +DREE +Y L + A D G +A T +T+ + D+NDN P F ++ Y F +L
Sbjct: 2928 VTVNGHLDREEQDEYLLKLVAAD--GAWQAATALTITIQDQNDNPPEFDEESYHFHFPEL 2985
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELLL---- 174
+ V+H +G V+A D D ++Y L PS+L + P TG++
Sbjct: 2986 QPP----VAH------VGQVTAIDRDKQGPNSVISYSLLQPSDLFTVDPATGDVFSKKTL 3035
Query: 175 ----TGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSE 230
T P S + Y LTV A D P ++ V ++D +
Sbjct: 3036 KYKHTHRPSSPENLYSLTVVATDNGKPPLSSKTVVYV---------------NVVDANNN 3080
Query: 231 APHRIEKRRVTRAV--------RPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDEN 282
AP R ++R V R + + + D + I + + E F I +++
Sbjct: 3081 AP-RFDQRSYLYPVPENYGVGKRVVQLMAKDDADFGVNAEISYFMTNVNGSEYFSIDEKS 3139
Query: 283 PWITV 287
W+ V
Sbjct: 3140 GWVYV 3144
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 112/271 (41%), Gaps = 50/271 (18%)
Query: 49 HEIRNSTESK------SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLD 102
HE+++ ++ + +G L + +DRE +Y L + A D G+ + +T+ V D
Sbjct: 1861 HELQDESQCQFRLHPTTGQLTLAEA-LDRETREKYVLKVRADD--GLQHTDIALTIQVTD 1917
Query: 103 ENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD----KVAYKLAV 158
NDN+P F Y F V + + + S IG V ATDAD + +++Y L
Sbjct: 1918 TNDNAPTFQSTAYSFDVPE----------NVPRGSRIGQVVATDADANGPNSQLSYTLIS 1967
Query: 159 --PSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQ---VWLQFN 212
+++ + P TG LT + V+ Y L V+A D P+ + V L N
Sbjct: 1968 DWANDVFSLNPSTGVFTLTASLDYEQVQHYILVVQATDGGIPALSSTVTVYCNVVDLNDN 2027
Query: 213 SPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETE 272
+P+ + PH + T P + + D GR+++A+
Sbjct: 2028 APIFE------------AGPHAADIVENTTIGTPILSVAAQDLDSGDNGRVIYAVAGG-- 2073
Query: 273 REKFKIRDENPWITVDENGDVRVKKRWDFEE 303
DEN V NG + +K D E+
Sbjct: 2074 -------DENGDFGVAPNGTLFTRKLLDREQ 2097
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 16/102 (15%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
LL SG +DRE + Y+L +TA D +G + T VTV VLDENDNSPVF + Y V
Sbjct: 2191 LLRVSGSLDRELRSNYTLEVTAKD-RGEPPRSSSTAVTVTVLDENDNSPVFDPRQYSATV 2249
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV 158
+ N+++ +S+ VSA D D +V Y +A+
Sbjct: 2250 AE-----NASIG-----ASVLQVSAMDRDEGANGRVRYSIAM 2281
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 21/117 (17%)
Query: 42 ALKNPTTHEIRNSTE--------SKSGVLLVTSGDIDREEVAQYSLVITATDVKGI--NK 91
L TT EIR E + S ++ +G +DREE+ +Y+L + ATD KG
Sbjct: 429 GLNGETTVEIRAGNELGHFRLDNTPSFDIVRVNGRLDREEIPKYNLTVVATD-KGTPPRS 487
Query: 92 AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
A ++ + V D ND+ PVF Q Y ++ +L + S + S+SATDAD
Sbjct: 488 ATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPT----------GSFVASISATDAD 534
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 61/144 (42%), Gaps = 13/144 (9%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-VKG 88
Y I GN + F L+ N T S + L T+G +DRE+V YSL + A D +
Sbjct: 202 YFIVNGNTDEKFRLE-----VTGNPTGETSYLHLETTGKLDREQVEFYSLNVCARDRGRP 256
Query: 89 INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
V V VLD NDN P+F Q D +LN + K ++ + D
Sbjct: 257 PRLGYLLVNVTVLDVNDNPPIFQQS-------DYVVALNESAPVGTKVLTVHATDKDSED 309
Query: 149 GDKVAYKLAVPSNLVVIVPQTGEL 172
K+ Y L I P+TG +
Sbjct: 310 NSKLTYYLPDTERQFTIDPETGTI 333
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 83/183 (45%), Gaps = 36/183 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVI----TA 83
VRYSI G+DN F + S+ G ++ + +++ E ++Y L I A
Sbjct: 2275 VRYSIAMGDDNRDFTI-------------SEDGGVIRVAKNLNFERKSRYYLTIRGEDCA 2321
Query: 84 TDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
++V + +T VT+ V+D NDN+PVF Y L + + V F + V
Sbjct: 2322 SEVGETPRGDTAQVTITVIDINDNAPVFLDSPY------LAHVMENMVPPGGGF--VIQV 2373
Query: 143 SATDAD----GDKVAYKLA-VPSNLVVIVPQTGELLLTGDPPSDD---VEYELTVEAHDL 194
A DAD D+V Y L ++L I TG++ L P D EY LT+ A D
Sbjct: 2374 KAYDADTPPYNDQVRYFLKEGDTDLFRINASTGDIFLLR--PLDRELVAEYTLTLVAMDT 2431
Query: 195 QSP 197
SP
Sbjct: 2432 GSP 2434
Score = 44.3 bits (103), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 14/93 (15%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ ++RY I+ GN+ + F + H I +G + + +D + V +Y L ITA
Sbjct: 3222 PNGMIRYKISAGNEKNEFFV-----HSI-------TGAVTILE-PLDYDLVQEYKLNITA 3268
Query: 84 TDVKGINK-AETHVTVDVLDENDNSPVFSQKVY 115
TD+ K A +TV+V D NDN P F+Q +Y
Sbjct: 3269 TDLGFEPKQAVAILTVNVSDINDNPPTFNQSIY 3301
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 65 TSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVF 110
TSG +DRE+VA YSL ++A G+ +T V + VLD NDN P F
Sbjct: 887 TSGCLDREQVAYYSLQLSAR--AGLAYGQTSVNITVLDINDNPPRF 930
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 23/136 (16%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y++ N F+L NP+T GV +T+ +D E+V Y LV+ A
Sbjct: 1957 PNSQLSYTLISDWANDVFSL-NPST-----------GVFTLTAS-LDYEQVQHYILVVQA 2003
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
TD GI + VTV +V+D NDN+P+F G + + N + S+ +
Sbjct: 2004 TD-GGIPALSSTVTVYCNVVDLNDNAPIFE-------AGPHAADIVENTTIGTPILSVAA 2055
Query: 142 VSATDADGDKVAYKLA 157
D +V Y +A
Sbjct: 2056 QDLDSGDNGRVIYAVA 2071
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 103/260 (39%), Gaps = 44/260 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y GN+ FA+ T L+ T +DRE L ++A D
Sbjct: 541 IYYDFDSGNEQGWFAIDQDTG-------------LVTTVATLDREVQGSIELHVSARD-G 586
Query: 88 GINK--AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G N A TH+ V +LDEND +P FSQ V R +L+ N +++ +V
Sbjct: 587 GPNPKYASTHLKVTILDENDEAPRFSQNVVRV-------TLSENTPPQSLVATLTAVDND 639
Query: 146 DADGDKVAYKLAVPSNLVVIVPQTGEL-LLTGDPPSD-------DVEYELTVEAHDLQSP 197
VAY S++ P+T L LTG + EY++ V A D +P
Sbjct: 640 QGTNGSVAYSFH--SSVSRDYPKTFALDGLTGQLTTKVNLDRETTAEYQILVIAKDQGTP 697
Query: 198 SRYAREPAQVWLQF-----NSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA-VRPTKRID 251
+ + A V L NSPV + L I + + K T A R ++
Sbjct: 698 PQSST--ATVILTLEDVNDNSPVFYPWRYLMPIPEDAPPGTSVGKVTATDADARENAQVR 755
Query: 252 FSETDGEMEGRIVFALEKET 271
+S G G +F +++ T
Sbjct: 756 YSLESG---GEGLFTVDERT 772
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 117/306 (38%), Gaps = 61/306 (19%)
Query: 12 GLPILVASSH---KHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G PIL ++ + V Y++ G++N F + + +G L T
Sbjct: 2047 GTPILSVAAQDLDSGDNGRVIYAVAGGDENGDFGV-------------APNGTLF-TRKL 2092
Query: 69 IDREEVAQYSLVITATDV---KGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
+DRE+ Y+L+++ATD + + T VTV +LD ND SP F + K
Sbjct: 2093 LDREQKPLYNLILSATDSPLPPALPLSSTVQVTVVLLDVNDMSPEF--------ISPTKI 2144
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE 184
S+ N +I +V + V Y L + + P G L ++G S D E
Sbjct: 2145 SIIENAPSNTVVMAIKAVDRDEGRNGYVEYSLEDTTLPFTVGPVDGLLRVSG---SLDRE 2201
Query: 185 ----YELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQMIDRKSEAPHRIEK 237
Y L V A D P R + V + NSPV Q + E
Sbjct: 2202 LRSNYTLEVTAKDRGEPPRSSSTAVTVTVLDENDNSPVFDPRQYSATV---------AEN 2252
Query: 238 RRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDV-RVK 296
+ +V +D E GR+ R + D+N T+ E+G V RV
Sbjct: 2253 ASIGASVLQVSAMDRDEG---ANGRV---------RYSIAMGDDNRDFTISEDGGVIRVA 2300
Query: 297 KRWDFE 302
K +FE
Sbjct: 2301 KNLNFE 2306
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 54/124 (43%), Gaps = 24/124 (19%)
Query: 39 HTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD----VKGINKAET 94
++ A ++P R +GV+ T IDREEV Y LV+ ATD AE
Sbjct: 1497 YSIASQDPEDQVRRFGINPSTGVIH-TLLPIDREEVDTYKLVVVATDSAQPASARLSAEK 1555
Query: 95 HVTVDVLDENDNSPVF----------------SQK---VYRFIVGDLKSSLNSNVSHWKK 135
V V V D NDN+P+F QK V + + DL SS N V++
Sbjct: 1556 LVIVIVEDINDNAPIFVSMSAVVLPLKGNYYQYQKEITVTQLVARDLDSSTNGLVTYELL 1615
Query: 136 FSSI 139
SSI
Sbjct: 1616 RSSI 1619
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 15/83 (18%)
Query: 65 TSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQK---------- 113
T+ +DREE+A Y L++ A D + T V + VLD+NDN P F++
Sbjct: 2827 TNAKLDREEIASYELIVEARDQGQPSLTGTATVLLTVLDKNDNPPQFTRLFSVNVTENAE 2886
Query: 114 ----VYRFIVGDLKSSLNSNVSH 132
V R DL N+NV++
Sbjct: 2887 IGTFVIRITSSDLDIGQNANVTY 2909
>gi|395817817|ref|XP_003782344.1| PREDICTED: uncharacterized protein LOC100956225 [Otolemur
garnettii]
Length = 1897
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE AQY++ IT TD+ K E +TV + D NDN+P F+Q Y VG+
Sbjct: 402 LVTQKPLDRESKAQYNITITVTDLGTPRLKTEHSITVLISDVNDNAPAFTQTSYTLFVGE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IG++SATD D +V Y L P ++LV I G
Sbjct: 462 ----NNSPALH------IGTISATDRDSGTNAQVTYSLLPPQDPHLPLTSLVSINADNGH 511
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 512 LFALRALDYEALQAFEFRVGATDRGSPA 539
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 11/85 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G ++RE AQY++ IT TD+ K E +TV + D NDN+P F+Q Y V +
Sbjct: 1697 LVTEGLLNRETRAQYNITITVTDMGTPRLKTEHSITVLISDVNDNAPTFTQTSYTLFVRE 1756
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATD 146
NS H IG++SATD
Sbjct: 1757 ----NNSPALH------IGTISATD 1771
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ K + ++TV V D NDN+P F+Q Y
Sbjct: 1143 LVTEGALDRETRAEYNVTITVTDLGTPRLKTQLNITVLVSDINDNAPAFTQTSYTLFADS 1202
Query: 122 LKSSLN---SNVSHWKKFSSIGSVS 143
L L ++VS FS + V+
Sbjct: 1203 LTVYLVIALASVSSLFLFSVVLFVA 1227
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LV ++DREE ++SL +TA D ++ T V + VLD NDN+P F Q +Y V +
Sbjct: 194 LVLDKELDREEQPEFSLTLTALDGGAPPRSGTATVLIVVLDNNDNAPEFLQSLYEVQVPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
S LNS V +VSA D D VAY L
Sbjct: 254 -NSPLNSLVL---------AVSARDLDAGAYGNVAYAL 281
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 56/118 (47%), Gaps = 17/118 (14%)
Query: 45 NPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLD 102
NP H + RN ++ + LV +DREE Q L +TA D ++ T + + VLD
Sbjct: 916 NPYFHVLTRNRSDGRKFPELVLDKALDREEQPQLRLTLTALDGGSPPRSGTSEIQIQVLD 975
Query: 103 ENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVSATDADG---DKVAYKL 156
NDN+P F+Q+ Y + V F S I +VSA D D +V+Y L
Sbjct: 976 INDNAPEFTQEFYE-----------AQVPENSPFGSLITTVSARDLDAGSFGEVSYAL 1022
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 84/195 (43%), Gaps = 26/195 (13%)
Query: 15 ILVASSHKHPHQLVRYSITQGND-------NHTFALKNPTTHEIRNSTESKSGVLLVTSG 67
+L S HP L +I Q D N+ + RN ++ + LV
Sbjct: 1433 LLKISESSHPGTLYPLNIAQDLDVGINTVQNYIISTNAHFHLFTRNLSDGRKYPELVLDK 1492
Query: 68 DIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+DREE Q L +TA D + T V + +LD NDN+P F Q++Y V +
Sbjct: 1493 ALDREEQPQLRLTLTAMDGGSPPRTGTSQVLIVILDINDNAPEFVQRLYEAQVPE----- 1547
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVV----IVPQTGELLLTGDPP 179
NS + S + VSA D D +++Y SN V+ I TGE+ L
Sbjct: 1548 NSPIG-----SLVIKVSARDLDAGINGELSYSFFQSSNRVIQAFEINTVTGEIRLKKVLD 1602
Query: 180 SDDVE-YELTVEAHD 193
++++ Y + VEA D
Sbjct: 1603 FEEIQSYRMEVEASD 1617
>gi|345793775|ref|XP_849221.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-15 [Canis lupus
familiaris]
Length = 788
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 95/196 (48%), Gaps = 31/196 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT +D+ K + ++TV V D NDN+P FSQ Y V +
Sbjct: 400 LVTEGALDRESQAEYNITITVSDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRE 459
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IG+VSATD D +V Y L P ++LV I G+
Sbjct: 460 ----NNSPALH------IGTVSATDRDAGANAQVTYSLLPPRDPHLPLASLVSINADNGQ 509
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ-----L 221
L + ++ +E+ V A D SP+ ++ +V + N+P VL Q
Sbjct: 510 LFALRSLDYEALQAFEVRVGAADRGSPALSSQALVRVLVLDDNDNAPFVLYPLQNGSAPC 569
Query: 222 LQMIDRKSEAPHRIEK 237
+++ R +EA + + K
Sbjct: 570 TELVPRAAEAGYLVTK 585
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 52 RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVF 110
RNS E + LV +DREE + L + A D K T V +DVLD NDN+P F
Sbjct: 180 RNSGEGRKYPELVLDKALDREEQTELRLTLLAVDGGVPPKTGTALVLIDVLDINDNAPEF 239
Query: 111 SQKVYR 116
Q +YR
Sbjct: 240 VQPLYR 245
>gi|321458298|gb|EFX69368.1| hypothetical protein DAPPUDRAFT_329129 [Daphnia pulex]
Length = 5030
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 104/237 (43%), Gaps = 28/237 (11%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
ES G+L + ++DRE +QY L I A D G ET + + V+D NDNSP FS+ Y
Sbjct: 1825 ESAKGILTLRD-NLDREFQSQYKLTIKADD--GEQFTETVLIIKVIDTNDNSPTFSEAAY 1881
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV--PSNLVVIVPQTG 170
F + + + + +G+V A D D +V+Y + +++ + PQ+G
Sbjct: 1882 SFDIPE----------DTGRGAFVGAVVANDMDEGINAQVSYTVLSDWGNDVFSLNPQSG 1931
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKS 229
LT + V+ Y V+A D PS + V + FN L D L D S
Sbjct: 1932 VFTLTSRLDYEQVQHYIFVVQAQDTGRPSL----SSTVTVYFNVLDLNDNAPL--FDPMS 1985
Query: 230 EAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWIT 286
+ E + +V D D G++V+++ E E+F+I +T
Sbjct: 1986 YSDELYENITIGSSVITVSATDQDSGD---NGKLVYSIIGGNENEQFRITQNGTIMT 2039
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 19/142 (13%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH 95
N N T++ T + R + SG + V +G IDRE +Y L ++A D G +AET
Sbjct: 2857 NANATYSFTENPTGKFR--IDPVSGNVTV-AGVIDRESKEEYLLKVSAVD--GSWRAETP 2911
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDK 151
+T+ V D+NDN+P F Y F +L+ + + +G V+A D D
Sbjct: 2912 LTITVQDQNDNAPEFEHSFYSFNFAELQ----------RNVAFVGQVTAADRDKQGPNAM 2961
Query: 152 VAYKLAVPSNLVVIVPQTGELL 173
+ Y + PS I +GE+L
Sbjct: 2962 ITYSIKHPSEFFSIDLTSGEIL 2983
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 74/181 (40%), Gaps = 36/181 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT+GN +H F + + + N +DRE +Y+L I A D
Sbjct: 1267 IFYYITEGNGDHKFRIDEASGQIVLNRA-------------LDRETSDRYTLTIGARDAG 1313
Query: 88 GIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
N T V +DVLDENDN+P F + S + S + + ATD
Sbjct: 1314 LPNLSTSTTVIIDVLDENDNAPEFMHSEAKI----------SALETLPVGSELVTFQATD 1363
Query: 147 AD---GDKVAYKLAVPS--NLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
AD ++A+ + + + I PQ G L L D E Y L + A D +P
Sbjct: 1364 ADLGINSEIAFSIGAGNMHDTFRIDPQLGTLYLEKHL---DFEMQRSYHLNITASDQGNP 1420
Query: 198 S 198
S
Sbjct: 1421 S 1421
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 11/88 (12%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVG 120
LL S +DRE A Y+L + A D +++++ V V VLDENDNSP+F KVY
Sbjct: 2142 LLRVSALLDRESRANYTLHVMAYDRGLPSRSQSLDVLVRVLDENDNSPLFDPKVY----- 2196
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+S++ N + S+ VSATD D
Sbjct: 2197 --SASVSENATIGL---SVLQVSATDLD 2219
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 79/182 (43%), Gaps = 29/182 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
++Y I GN F + SK+G + + +G +D E QY L I A D
Sbjct: 2644 IQYGIAGGNTGDVFQIN------------SKTGEVSIGTG-LDYEISTQYELWIEARDSD 2690
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS--IGSVSA 144
I+ A T + ++V D NDNSP+F +Y S L SS + +V A
Sbjct: 2691 DISLASVTRLLINVTDFNDNSPIFHHAIY------YASILEEQFPPSPLMSSQLVLTVHA 2744
Query: 145 TDADGDK---VAYKLAVPSNL---VVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSP 197
TD D + V Y+L +L + ++G++ +DV Y L VEA D +P
Sbjct: 2745 TDLDSGRNGLVRYQLRNSGDLDNAFSVDAESGKIYTNVKLDREDVGHYVLIVEAVDQGAP 2804
Query: 198 SR 199
R
Sbjct: 2805 QR 2806
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 26/149 (17%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALK-NPTTHEIRNSTESKSG 60
EN+++G+ V + ++ + V I GN+ F L+ P+ H +R
Sbjct: 387 ENAQNGSVVAAVSVIDFDEGANGETTVE--IKAGNELVHFRLEETPSFHIVR-------- 436
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+G +DRE++++Y+L I ATD KA + + V D ND+ P+F + Y ++
Sbjct: 437 ----VNGVLDREKISKYNLTIVATDSGSPARKALAFLIIHVNDVNDHEPIFEKSEYSAVL 492
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+L S S + ++ATD D
Sbjct: 493 SELVS----------VGSYVAGITATDED 511
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 116/293 (39%), Gaps = 64/293 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I++GN+ F + G+L V S +DRE Y+L + A D
Sbjct: 1054 VSYFISEGNEAVKFGI-------------FPDGMLYVKS-PLDREAKDYYALTVVAED-G 1098
Query: 88 GI--NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G+ + VT+ ++DENDN P F+ + + F + + + S +G ++AT
Sbjct: 1099 GMPPRSSSVSVTIHIIDENDNPPKFNNETFSFYIPE----------NEAPDSYVGRLTAT 1148
Query: 146 DAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAR 202
D D ++ + +A + I P++G + T+ D + R +
Sbjct: 1149 DRDVGRNAELTFSIATSQSDFSIDPKSG--------------FIKTLRYFDRE---RLLQ 1191
Query: 203 EPAQVWLQFNSPVLQDEQLLQMIDRK----------------SEAPHRIEKRRVTRAVRP 246
Q ++ + V+ D ++++ DR S P++ +
Sbjct: 1192 TTGQDYIVLEA-VVSDNGVIRLRDRARIHVFILDVNDNAPAFSRVPYKTQVSEGAAVDTQ 1250
Query: 247 TKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
R+ ++ D ++ G I + + + KF+I + + I ++ D R+
Sbjct: 1251 VFRVVATDADDQLNGGIFYYITEGNGDHKFRIDEASGQIVLNRALDRETSDRY 1303
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 63/157 (40%), Gaps = 20/157 (12%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+L T+ IDRE+ + Y L+I A G + V V V D NDN P F D
Sbjct: 866 VLTTAKRIDREKQSHYQLLIVAR--SGFSYGTVSVNVTVQDVNDNPPRF----------D 913
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV-PSNLVVIVPQTGELLLTGD 177
++ V +W I A D D ++ Y L + P L I P G + L
Sbjct: 914 KTRAVARVVENWPANHEIYLAKAEDLDTGNNSRITYSLTLNPHELFTISPTLGMIYLNRP 973
Query: 178 PPSDDVEYE----LTVEAHDLQSPSRYAREPAQVWLQ 210
+ +E L V A D SP +R+ + L+
Sbjct: 974 LQHEQFYFESSLTLEVTATDDGSPPLSSRQLVTLNLE 1010
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 14/93 (15%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ +V Y+I GN+ + F L +P T +I + +D + + +++L ITA
Sbjct: 3180 PNGVVHYAIVSGNEENKF-LIDPNTGDIS------------VANTLDFDTLPKFTLNITA 3226
Query: 84 TDVKGINK-AETHVTVDVLDENDNSPVFSQKVY 115
TD+ K A +TV + D NDN P F+Q Y
Sbjct: 3227 TDMGFEPKLATATLTVLLTDVNDNPPRFNQSHY 3259
>gi|444713174|gb|ELW54082.1| Protocadherin beta-3 [Tupaia chinensis]
Length = 673
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 73/151 (48%), Gaps = 28/151 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
L++ G +DRE A+Y++ IT TD+ H +TV V D NDN+P F+Q Y +V +
Sbjct: 402 LMSEGPLDRESQAEYNITITVTDLGTPRLTTEHSITVLVSDVNDNAPAFTQASYTLLVRE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IG++SATDAD +V Y L P ++LV I G+
Sbjct: 462 ----NNSPALH------IGTISATDADAGTNAQVTYSLLPPHDPQLALASLVSINADNGQ 511
Query: 172 LLLTGDPPSDDVE----YELTVEAHDLQSPS 198
L S D E +E V A D SP+
Sbjct: 512 LFALR---SLDYEALRAFEFGVRAADRGSPA 539
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 21/169 (12%)
Query: 35 GNDNHTFALKNPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE 93
G N+T A N H + R+ + + LV +DRE+ + SL +TA D ++
Sbjct: 165 GLQNYTLA-PNSYFHVVTRSRRDGRKYPELVLDKALDREQQPELSLTLTALDGGSPPRSG 223
Query: 94 T-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG--- 149
T + + VLD NDN+P F Q +Y + + NS ++ S I +VSA+D D
Sbjct: 224 TAQINILVLDINDNAPEFEQTLYEVQILE-----NSPIN-----SVIVTVSASDLDAGTF 273
Query: 150 DKVAYKLAVPSNLVV----IVPQTGELLLTGDPPSDDV-EYELTVEAHD 193
V+Y PS ++ + P TG + L +++ YE+ +EA D
Sbjct: 274 GTVSYAFFHPSEEILKTFHLNPITGAMHLVKYLNFEEINSYEIDIEAKD 322
>gi|344257115|gb|EGW13219.1| Protocadherin Fat 4 [Cricetulus griseus]
Length = 5152
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 118/279 (42%), Gaps = 62/279 (22%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ V+YSI+ G+ + R +KSGV+ T +DREE Y L I A
Sbjct: 891 PNGTVQYSISAGDRS-------------RFQINAKSGVI-STRMALDREEKTAYQLQIVA 936
Query: 84 TDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
TD + + VTV VLD DN PVFSQ Y F+V + NV+ +GSV
Sbjct: 937 TDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAYSFVVFE-------NVALGYH---VGSV 986
Query: 143 SATDAD-GDKVAYKLAVPS--NLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSR 199
SAT D ++Y + + + P TG+L T D + S
Sbjct: 987 SATTMDLNANISYLITTGDQRGMFAMNPVTGQL--------------TTASVIDREEQSF 1032
Query: 200 YAREPAQVWLQFNSPVLQDEQLLQMI--DRKSEAPH---------RIEKRRVTRAVRPTK 248
Y Q+ + + + + L+ + D APH +E + ++ K
Sbjct: 1033 Y-----QLRVVASGGAVTGDTLVNITVKDLNDNAPHFLQAVESINAVENWQAGHSIYQAK 1087
Query: 249 RIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
+D D + GR++++L K+ + F I ++N I++
Sbjct: 1088 AMD---PDEGVNGRVLYSL-KQNPKNLFAINEQNGNISL 1122
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 76/174 (43%), Gaps = 29/174 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ NP T + L T+ IDREE + Y L + A+
Sbjct: 997 ISYLITTGDQRGMFAM-NPVTGQ------------LTTASVIDREEQSFYQLRVVAS--G 1041
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V D NDN+P F Q V S+N+ V +W+ SI A D
Sbjct: 1042 GAVTGDTLVNITVKDLNDNAPHFLQAV---------ESINA-VENWQAGHSIYQAKAMDP 1091
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSP 197
D +V Y L P NL I Q G + L G Y+L + A D+ P
Sbjct: 1092 DEGVNGRVLYSLKQNPKNLFAINEQNGNISLLGALDVHAGSYQLEILASDMGVP 1145
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ YSL + ATD KG + T V V VLD NDN+PVFSQ VYR
Sbjct: 2280 TGELDREEVSNYSLTVVATD-KGQPPLSSSTEVVVMVLDINDNNPVFSQAVYR 2331
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 83/184 (45%), Gaps = 38/184 (20%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+ YSI +GN+ FA+ R S + V L+ G +D E YSL+I A D
Sbjct: 1415 LIHYSILKGNEERQFAID-------RFSGQ----VTLI--GKLDYEATPAYSLLIQAVDS 1461
Query: 87 KGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVSA 144
I+ T +++D+LDENDN+P F KS+L +V + + SV+A
Sbjct: 1462 GAISLNSTCTLSIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVTA 1510
Query: 145 TDADGDKVA---YKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQ 195
TD+D A Y + +N I P TG + L D E Y+L + A D
Sbjct: 1511 TDSDSGVNADLHYTITGSNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQG 1567
Query: 196 SPSR 199
P R
Sbjct: 1568 RPPR 1571
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 85/177 (48%), Gaps = 35/177 (19%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+RY I+ GN+ FA+ S +GVL + +D E +++ + I+ATD
Sbjct: 3296 LIRYDISSGNEEGIFAIN------------SSTGVLTLAKA-LDYELCSKHEMTISATDG 3342
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + +TV+V+D NDNSPVF + V + S + V H ++AT
Sbjct: 3343 GWVARTGSCSLTVNVIDVNDNSPVFVPDEFFPTVMENAPS-GTTVIH---------LNAT 3392
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
DAD +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 3393 DADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQG---FLDFETKQSYHLTVKAFNV 3446
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 31/176 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN ++F + N T EIR+ +DRE+++ Y L + +
Sbjct: 2872 PNGQLDYEIVNGNKENSFTI-NHATGEIRSIRP------------LDREKMSHYELTVKS 2918
Query: 84 TDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D KG T V +++LDENDN+P FSQ ++ S NS + + ++
Sbjct: 2919 SD-KGSPSQSTSVRVIINILDENDNAPRFSQIFSAYV------SENSPLGY-----TVTR 2966
Query: 142 VSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ +D D A Y +A S I P TG+++++ +D + Y + V AHD
Sbjct: 2967 VTTSDEDIGINAISRYSIADTSLPFTINPNTGDIVISRPLNREDTDRYRIRVSAHD 3022
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 82/194 (42%), Gaps = 38/194 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I +GN+ F L N + + + LV+ G +DRE QY L++ D KG
Sbjct: 345 YRIVRGNEAGRFRLD-----ITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KGE 398
Query: 90 NKAETH--VTVDVLDENDNSPVFSQKVYR------FIVGDLKSSLNSNVSHWKKFSSIGS 141
K + V V V D NDN PVF Y+ +VG SS+
Sbjct: 399 PKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVG----------------SSVLQ 442
Query: 142 VSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQ 195
V+A DAD + Y+L + P+TG L+T P D +Y LTV+A D
Sbjct: 443 VAAADADEGTNADIRYRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTVQATDRG 500
Query: 196 SPSRYAREPAQVWL 209
PS R A + L
Sbjct: 501 VPSLTGRAEAIIQL 514
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y++ G D+ +F + + +SG L+ T
Sbjct: 1925 GDGSKIMQLTAMDADEGANALVTYALISGADD-SFRI------------DPESGDLIATR 1971
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + + D ND++P FS+ VY F
Sbjct: 1972 -RLDREHRSKYSLLVRADD--GLQSSDMRINITISDVNDHTPKFSRPVYSF 2019
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVF 110
L T +DREE A Y L++ ATD+ ++ T V V +LD NDNSPVF
Sbjct: 812 LSTISSLDREEQAFYCLLVLATDLGSPPQSSTAQVNVSLLDINDNSPVF 860
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 84/207 (40%), Gaps = 27/207 (13%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYSI GN F + +E V +G +DRE +Q L I+A D +
Sbjct: 681 LRYSIVSGNGLGWFHI-----------SEHSGLVTTSAAGGLDRELASQIVLNISARD-Q 728
Query: 88 GINKAETH--VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G++ ++ + V VLD ND PVFSQ + S+ N + +G+
Sbjct: 729 GVHPKVSYAQLVVTVLDVNDEKPVFSQPEGYTV------SVVENAPAGTELLVLGATDGD 782
Query: 146 DADGDKVAYKLAVPSN---LVVIVPQTGEL-LLTGDPPSDDVEYELTVEAHDLQSPSRYA 201
+D V + L + L + P +G L ++ + Y L V A DL SP + +
Sbjct: 783 LSDNGTVRFSLQEAESDQRLFRLDPVSGRLSTISSLDREEQAFYCLLVLATDLGSPPQSS 842
Query: 202 REPAQVWL---QFNSPVLQDEQLLQMI 225
V L NSPV Q I
Sbjct: 843 TAQVNVSLLDINDNSPVFYPVQYFAHI 869
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + + S + + VRY I GN + F + +S +G
Sbjct: 2336 ENTLTGTDI--IQVSATDSDEGTNGQVRYGIVGGNTHQEFRI------------DSVTGA 2381
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVY 115
+ V +DRE Y+L + ATD + + VT+ +LD ND PVF Y
Sbjct: 2382 ITVAK-TLDRETTPAYTLTVQATDRGSSPRTDVCTVTITLLDMNDFVPVFELSPY 2435
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 27/123 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
+ Y+IT GN F + G L + S ++DRE +Y L++ A+D
Sbjct: 1202 IAYTITDGNTGDAFGIF-------------PDGQLYIKS-ELDRELQERYVLLVVASDRA 1247
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
V+ ++ A +VTV + D NDN P+F+ Y F + + S +G VSA
Sbjct: 1248 VEPLS-ATVNVTVILEDVNDNRPLFNSTNYTFYFEE----------EQRAGSFVGKVSAV 1296
Query: 146 DAD 148
D D
Sbjct: 1297 DKD 1299
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 28/155 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN++ GT V L + A S + + I GN+ F E++ S +
Sbjct: 540 ENAQVGTVVALLTVTDADS-PAANGNISVQILGGNEQRHF--------EVQRSKVPNLSL 590
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGI--------NKAETHVTVDVLDENDNSPVFSQK 113
+ V S +DRE + Y+L ++ +D G + + + V D ND+ PVF+Q+
Sbjct: 591 IKVASA-LDRERIPSYNLTVSVSDNSGAPPTAEVQARSSVASLVIFVNDINDHPPVFAQQ 649
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
VYR +L+ V S + VSATD D
Sbjct: 650 VYRV-------NLSEEVPPG---SYVSGVSATDGD 674
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 122/303 (40%), Gaps = 59/303 (19%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
MEN G+ V L V + + + YSI G+ FA+ K G
Sbjct: 2125 MENLPVGSTV--LVFNVTDADDGVNSQLSYSIASGDSLGQFAVD-------------KHG 2169
Query: 61 VLLVTSGDIDREEVAQYSLVITATDV----KGINKAETHVTVDVLDENDNSPVFSQKVYR 116
VL T +DRE + Y+LVI D + V++ +LD NDN P+F
Sbjct: 2170 VLK-TLKALDRESQSFYNLVIQVHDSPQPPASRFTSTAQVSIILLDVNDNPPMF------ 2222
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSV----SATDADG---DKVAYKLAVP-SNLVVIVPQ 168
L+ +++ + + I +V ATD D + Y L P N I
Sbjct: 2223 ---------LSPKLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTI 2273
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVWLQF--NSPVLQDEQLLQM 224
GE+ LTG+ ++V Y LTV A D Q P + E + L N+PV
Sbjct: 2274 DGEVHLTGELDREEVSNYSLTVVATDKGQPPLSSSTEVVVMVLDINDNNPVF-------- 2325
Query: 225 IDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPW 284
S+A +R++ + T ++ +++D G++ + + ++F+I
Sbjct: 2326 ----SQAVYRVQIKENTLTGTDIIQVSATDSDEGTNGQVRYGIVGGNTHQEFRIDSVTGA 2381
Query: 285 ITV 287
ITV
Sbjct: 2382 ITV 2384
>gi|297285835|ref|XP_002808368.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3-like [Macaca mulatta]
Length = 4191
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 80/280 (28%), Positives = 117/280 (41%), Gaps = 53/280 (18%)
Query: 42 ALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDV 100
AL N + E+ S + +SG L+ T+ +DRE + ++ L +TA D A T V V V
Sbjct: 437 ALMNSRSLELF-SIDPQSG-LIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTV 494
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLA 157
D ND+SPVF Q YR +L NV ++ I + ATD D A Y+
Sbjct: 495 ADRNDHSPVFEQAQYR-------ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFV 544
Query: 158 VPSNLVV-------IVPQTGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVW 208
P I P++G + +G + +E YEL VEA D Q P P
Sbjct: 545 GPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSAT 599
Query: 209 LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGR 262
++ + VL D AP EKR V + VRP R+ ++ D + G
Sbjct: 600 VRVHITVL---------DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGL 650
Query: 263 IVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ + + R F I G+++V DFE
Sbjct: 651 VHYNIISGNSRGHFAID--------SLTGEIQVVAPLDFE 682
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 560 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 618
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 619 KRY---VAQVREDV-------RPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDS 668
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 669 LTGEIQVVA--PLDFEAEREYALRIRAQDAGRP 699
Score = 42.4 bits (98), Expect = 0.29, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 30/179 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 1149 ENSIVGSVVA--QITAVDPDEGPNAHIMYQIVEGNIPELFQM------------DIFSGE 1194
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIV 119
L D+D E +Y +V+ AT +++A HV + +D+NDNSPV + Q ++ V
Sbjct: 1195 LTALI-DLDYEARQEYVIVVQATSAPLVSRATVHVRL--IDQNDNSPVLNNFQILFNNYV 1251
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
+ + S + IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1252 SNRSDTFPSGI--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1302
Score = 41.6 bits (96), Expect = 0.56, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y
Sbjct: 782 SGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHL------- 834
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
LN + + +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 835 RLNEDAA---VGTSVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLD 891
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 892 YKQERYFKLVLTASD 906
Score = 39.7 bits (91), Expect = 2.0, Method: Composition-based stats.
Identities = 58/218 (26%), Positives = 87/218 (39%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 1052 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1099
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V+ Y L A D +G+ T V++ V D NDN+PVF + + V + NS V
Sbjct: 1100 AVSVYELTAYAVD-RGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1153
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1154 G-----SVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1208
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR + NSPVL + Q+L
Sbjct: 1209 YVIVVQATSAPLVSRATVHVRLIDQNDNSPVLNNFQIL 1246
Score = 38.5 bits (88), Expect = 4.3, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 22/177 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKV 114
++ SG + + + +D E+ Y+L ITA D KA+T +V V V D NDN+P F
Sbjct: 978 DADSGAITLQA-PLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASH 1036
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN---LVVIVPQ 168
Y +V + F+S+ +SATD D +V Y + I P
Sbjct: 1037 YTGLVSE----------DAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPT 1086
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQL 221
+G + + V YELT A D P QV +Q N+PV E+
Sbjct: 1087 SGIVRTVRRLDREAVSVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEF 1143
Score = 38.1 bits (87), Expect = 5.0, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ GT V + V + + + + Y IT GN + FA+ ++ GV
Sbjct: 838 EDAAVGTSV----VSVTAVDRDANSAISYQITGGNTRNRFAI------------STQGGV 881
Query: 62 LLVTSG-DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +D ++ + LV+TA+D + ++ +V +++ D N + PVF Y V
Sbjct: 882 GLVTLALPLDYKQERYFKLVLTASD-RALHD-HCYVHINITDANTHRPVFQSAHYSVSVN 939
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPP 179
+ + S+I +SA+D D G+ + NL +T P
Sbjct: 940 EDRPV----------GSTIVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAP 989
Query: 180 ---SDDVEYELTVEAHDLQSPSR 199
D V Y L + A D P +
Sbjct: 990 LDYEDQVTYTLAITARDNGIPQK 1012
Score = 38.1 bits (87), Expect = 5.3, Method: Composition-based stats.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 636 LRVTATDRDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVVA-PLDFE 682
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y+L I A D ++ ++ V+D ND+ P+F ++ V + + L +V
Sbjct: 683 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLE-NAPLGHSV 741
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL-AVPSNL-VVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L V S+ VI TG + ++G + VE Y
Sbjct: 742 IH------IQAVDADHGENARLEYSLTGVASDTPFVINSATGWVSVSGPLDRESVEHYFF 795
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 796 GVEARDHGSP 805
>gi|119582372|gb|EAW61968.1| protocadherin beta 15 [Homo sapiens]
Length = 787
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 54/103 (52%), Gaps = 14/103 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ K E +TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTEGALDRETRAEYNITITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN 161
NS H IGSVSATD D +V Y L P +
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQD 495
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVY 115
LV ++DREE A+ L +TA D ++ T + + VLD NDN+P F Q +Y
Sbjct: 194 LVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFVQALY 247
>gi|449499705|ref|XP_004186240.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Taeniopygia
guttata]
Length = 5033
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 76/155 (49%), Gaps = 31/155 (20%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L++YS+ +GN+ + F + T V LV G +D E A YSLVI A D
Sbjct: 1290 LIQYSVIKGNEENQFVIDTSTGQ-----------VTLV--GRLDYEATASYSLVIQAVDS 1336
Query: 87 KGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVSA 144
++ + T +++DVLDENDNSP F KS+L +V + + SV+A
Sbjct: 1337 GAVSLSSTCMLSIDVLDENDNSPSFP-----------KSTLLVDVLENMRVGELVSSVTA 1385
Query: 145 TDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLL 174
TD+D GD + Y + +N I P TG + L
Sbjct: 1386 TDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFL 1420
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 134/302 (44%), Gaps = 43/302 (14%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+RY+I+ GN+ FA+ N TT L + +D E ++ LV+TATD
Sbjct: 3171 LIRYNISSGNEAGIFAI-NTTTGT------------LTLAKPLDFELDQKHELVVTATDG 3217
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+++ VTV+V+D NDNSP FS + Y V + + +++ ++AT
Sbjct: 3218 GWVSRTGYCSVTVNVIDVNDNSPAFSPEEYFPTV----------LENAPSGTTVICLNAT 3267
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRY 200
DAD +AY + + S+L VI P TG + G + + Y LTV+A ++
Sbjct: 3268 DADSGSNAVIAYAIQSSDSDLFVIDPNTGTITTQGFLDYETKQSYHLTVKAFNV------ 3321
Query: 201 AREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEME 260
P + F + +Q E + + R + E + S+ D ++
Sbjct: 3322 ---PDEERCSFATVNIQLEGTNEYVPRFVSKLYYFEVSEAASKGTVVGEVFASDRDMGID 3378
Query: 261 GRIVFALEKETEREKFKIRDENPWITV----DENGDVRVKKRWDFEELGPEKTIDF-WVT 315
G + + + + ++ F+I +++ I V D + R+ + + LG + D VT
Sbjct: 3379 GEVHYLIFGNSRKKGFQIDEKSGQIYVSGPLDREKEERISLKVLAKNLGSIRGADIDEVT 3438
Query: 316 IN 317
+N
Sbjct: 3439 VN 3440
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 16/87 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y I +GN ++F++ N T EIR+ +DRE+++QY+L I A+D K
Sbjct: 2751 LNYEIIEGNTENSFSI-NRATGEIRSIRP------------LDREKLSQYTLTIKASD-K 2796
Query: 88 GINKAET--HVTVDVLDENDNSPVFSQ 112
GI T V ++VLDENDN+P FSQ
Sbjct: 2797 GIPLQSTTVKVIINVLDENDNAPRFSQ 2823
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN +GT V L P+ V+YSI+ G+ + R ++GV
Sbjct: 746 ENEPAGTYVTTLS--ATDPDLGPNGTVKYSISAGDTS-------------RFQVHGQTGV 790
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGI-NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+ T +DREE Y L I ATD + ++ + VT+ VLD DN PVFSQ Y F+V
Sbjct: 791 I-TTKIALDREEKTAYQLQIVATDGGHLQSQNQAIVTITVLDTQDNPPVFSQGTYSFVV 848
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+G++DRE VA Y+L + ATD KG + T V V VLD NDN+P+F+QK+Y+ V +
Sbjct: 2155 TGELDREAVANYTLTVVATD-KGQPSLSSSTDVVVIVLDINDNNPLFAQKLYKVEVAE 2211
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K L + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1800 GDGSKILQLTAMDADEGANALVTYTIISGADD-SFHI------------DPESGELIATK 1846
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND+ P FS+ VY F
Sbjct: 1847 -RLDRERRSKYSLLVRADD--GLQSSDVRINITVSDVNDHIPKFSKPVYSF 1894
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 68/174 (39%), Gaps = 29/174 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ T + T+ IDREE A Y L + A
Sbjct: 872 ISYLITTGDQRGVFAINRVTGQ-------------ITTASIIDREEQAFYQLKVVAR--G 916
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G + V + V D NDNSP F Q + V +WK +I A D
Sbjct: 917 GAITGDAVVNITVKDLNDNSPHFIQ----------VVESVNVVENWKAGHTIFQAKALDP 966
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSP 197
D V Y L P L I QTG + LTG + Y++ + A D+ P
Sbjct: 967 DEGVNGVVLYSLKQNPKGLFSINEQTGAISLTGPLDINAGSYQVEILASDMGVP 1020
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 16/93 (17%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSG----VLLVTSGDIDREEVAQYSLVITATD 85
Y I GN+ F L N T + SG + LV+ G +DRE Y L++ D
Sbjct: 170 YRIVAGNEEGRFRL---------NITLNPSGEGAFLHLVSRGGLDREATPTYQLLVQVED 220
Query: 86 VKG--INKAETHVTVDVLDENDNSPVFSQKVYR 116
KG + V V + D NDN P+FSQ +Y+
Sbjct: 221 -KGEPRRRGYLQVNVTIQDINDNPPIFSQTLYQ 252
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS SGT + L + + VR+S+ + +P T + SG
Sbjct: 629 ENSPSGTEL--LVLSATDGDLGDNGTVRFSLQEAEPALVAVGPSPVTPRQMFRLDPVSGK 686
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVF 110
L S +DREE + +SL + ATD+ + V V +LD NDNSPVF
Sbjct: 687 LSTIS-QLDREEQSHFSLQVLATDLGSPPLSSVARVNVTILDVNDNSPVF 735
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 75/176 (42%), Gaps = 29/176 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y + GN+ F L + E+R LV S +DRE QY L++TA D
Sbjct: 2341 LTYMLVAGNEEGAFTLSG--SGELR----------LVQS--LDREAKEQYLLLVTAADTG 2386
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
T + V V D NDN P F+ +Y V + + I V+++D
Sbjct: 2387 SPALTGTGTIAVTVDDVNDNVPTFAFNMYFATVPE----------DAPTGTDILLVNSSD 2436
Query: 147 ADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
AD ++Y+L ++ I P TG+++ + + E Y L V A D P+
Sbjct: 2437 ADASTNAVISYRLMGGNSQFTINPSTGQIITSALLDREARENYTLVVVASDGGFPT 2492
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%), Gaps = 17/92 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
+ YSI +GN F + G L + S ++DRE +Y L++ A+D
Sbjct: 1077 IAYSIIEGNAGDAFGIF-------------PDGQLYIKS-ELDRELQERYVLLVVASDRA 1122
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
V+ +N A +VTV + D NDN P+F+ Y F
Sbjct: 1123 VEPLN-ATVNVTVILEDVNDNRPLFNSTNYVF 1153
>gi|403285083|ref|XP_003933869.1| PREDICTED: protocadherin Fat 1 [Saimiri boliviensis boliviensis]
Length = 4589
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 118/286 (41%), Gaps = 42/286 (14%)
Query: 23 HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVIT 82
H V Y I GN F + NP + I +T +D E + Y+L+I
Sbjct: 1692 HSQSSVVYEIKDGNIGEAFDI-NPHSGSI------------ITQRALDFETLPIYTLIIQ 1738
Query: 83 ATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
T++ G++ A T V V + DENDNSPVF Q Y ++ + +S+NS V + + +
Sbjct: 1739 GTNMAGLS-ANTTVVVHLQDENDNSPVFVQAEYTGLISE-SASVNSVVLTDRNVPLV--I 1794
Query: 143 SATDADGDK---VAYKLAVPS--NLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQS 196
A DAD D + Y + P+ + I T + ++ ++ TV+ HD+ +
Sbjct: 1795 GAADADKDSNALLVYHIVEPAMHSYFAIDSSTAAIHTVRSLDYEETSIFQFTVQVHDMGT 1854
Query: 197 PSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKR------I 250
P +A A V + +ID P + PT R +
Sbjct: 1855 PRLFAEYAANV-------------TIHVIDINDCPPVFARPLYEASLLLPTYRGVKVITV 1901
Query: 251 DFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
+ ++ D ++++++ + EKF + +TV +R +
Sbjct: 1902 NATDADSSAFSQLIYSITEGNIGEKFSVDYRMGALTVQNTTQLRSR 1947
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 32/199 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + YSI GN++ F++ +SK+G + + +
Sbjct: 3246 GTEVLQVYAASRDIEANAEITYSIISGNEHGKFSI------------DSKTGAVFIIE-N 3292
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L + ATD ++ T V+++V D NDN+PVFSQ Y ++ + + L
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVAT-VSINVTDINDNTPVFSQDTYTAVISE-DAVL 3350
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
S+ +V A DADG + Y + + I P G++ +T +
Sbjct: 3351 E---------QSVITVMADDADGPLNSHIHYSIIDGNRGSSFTIDPVRGDVKVTKVLDRE 3401
Query: 182 DVE-YELTVEAHDLQSPSR 199
+ Y LTV+A D SP R
Sbjct: 3402 TISGYTLTVQASDNGSPPR 3420
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + P VRY I G+ + F + + +R T+
Sbjct: 45 ENSAAKTYV-GHPVKMGIYLTDPSWEVRYKIVSGDSENLFKAEEYILGDFCFLRIRTKGG 103
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A T V V VLD ND P+FS Y
Sbjct: 104 NTAIL------NREVKDHYALIVKAVEKNTNVEARTKVRVQVLDTNDLRPLFSPTSYSV- 156
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +S+ VSATDAD + Y +++ I P +G ++LT
Sbjct: 157 ------SLPENTAIR---TSVARVSATDADIGTNGEFYYSFKDRTDMFAIHPSSGVVVLT 207
Query: 176 G 176
G
Sbjct: 208 G 208
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y IT GN F++ K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1176 YRITSGNPQGFFSI------------HPKTGLITTTSRKLDREQQDEHILEVTVTDNGSP 1223
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRF 117
K+ + V +LDENDN P F QK Y+
Sbjct: 1224 PKSTIARIIVKILDENDNKPQFLQKFYKI 1252
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 77/175 (44%), Gaps = 36/175 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N I+N + + +DRE+ Y L ITATD
Sbjct: 2954 VTYFITGGDALGQFAVEN-----IQNEWK------VYVKKPLDREKRDNYLLTITATD-- 3000
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD--LKSSLNSNVSHWKKFSSIGSVSAT 145
G ++ V V VLD NDNSPV + +Y + + L L I VSAT
Sbjct: 3001 GTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPEDTLPGKL------------IMQVSAT 3048
Query: 146 DAD---GDKVAYK-LAVPSNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHD 193
DAD ++ Y L + + P TGEL + P D E Y L V A D
Sbjct: 3049 DADIRSNAEITYTLLGSGAEKFKLNPDTGELKTSA--PLDREEQAVYHLLVRATD 3101
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+ R++ AQ+ L +T +D KA T V V VL N N P F+Q Y K++ +
Sbjct: 426 VKRQQAAQFELEVTTSD----RKASTKVLVKVLGANSNPPEFTQTAY-------KAAFDE 474
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT 188
NV S+ +V + + V Y +A +++ ++ + T S++++YEL
Sbjct: 475 NVPIGTTVMSLSAVDPDEGENGYVTYSIANVNHVPFVIDHFTGAVST----SENLDYELM 530
Query: 189 VEAHDLQ 195
+ L+
Sbjct: 531 PRVYTLR 537
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 14/97 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
L TS +DREE A Y L++ ATD G E + + + D NDN+P FS Y V
Sbjct: 3079 LKTSAPLDREEQAVYHLLVRATDGGG-RFCEASIVLTLEDVNDNAPEFSADPYAITV--- 3134
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKL 156
+ + + + V ATDAD K++Y L
Sbjct: 3135 -------FENTEPGTLLTRVQATDADAGLNRKISYSL 3164
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN +F + +P +++ + +DRE ++ Y+L + A+D
Sbjct: 3370 IHYSIIDGNRGSSFTI-DPVRGDVK------------VTKVLDRETISGYTLTVQASDNG 3416
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+P FS+ Y I+
Sbjct: 3417 SPPRVNTTTVNIDVSDVNDNAPAFSRGNYSVII 3449
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 104/250 (41%), Gaps = 36/250 (14%)
Query: 50 EIRNSTESKSGV----------LLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVT 97
EIR S SGV ++ TS +DRE + Y L + ATD +G+ + +
Sbjct: 1068 EIRYSIRDGSGVGVFRIGEETGVIETSDRLDRESTSHYWLTVFATD-QGVVPLSSFIEIY 1126
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAY 154
++V D NDN+P S+ VY + + + K S+ + A D D DK+ Y
Sbjct: 1127 IEVEDVNDNAPQTSEPVYYPEI----------MENSPKDVSVVQIEAFDPDSSSDDKLTY 1176
Query: 155 KLAV--PSNLVVIVPQTGELLLTG---DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL 209
++ P I P+TG + T D D E+ L V D SP + A++ +
Sbjct: 1177 RITSGNPQGFFSIHPKTGLITTTSRKLDREQQD-EHILEVTVTDNGSPPK--STIARIIV 1233
Query: 210 QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVR-PTKRIDFSETDGEMEGRIVFALE 268
+ Q LQ K P R + R A R P R+ ++ D I +++E
Sbjct: 1234 KILDENDNKPQFLQKF-YKIRLPEREKPDRERNARREPVYRVIATDRDEGPNAEISYSIE 1292
Query: 269 KETEREKFKI 278
E +F I
Sbjct: 1293 DGNEHGRFFI 1302
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 36/185 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ GN++ F + + ++G+L + S +DRE +Y+L IT D+
Sbjct: 754 YAVSGGNEDSCFII------------DMETGMLKILS-PLDRETTDKYTLNITVYDLGIP 800
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
KA + V V+D NDN P F Q+ Y V + K + S I V ATD D
Sbjct: 801 QKAAWRLLDVVVIDANDNPPEFLQESYFVEVSEDK----------EVHSEIIQVEATDKD 850
Query: 149 ---GDKVAYKLAVPSNLVVIVPQTG--ELLLTGDPPSDDVEYELTVEAHDLQSPSRYARE 203
+V Y + +++ I G ++L D V Y L +EA D ARE
Sbjct: 851 LGPNGRVTYSVLTDTDMFSIDSTAGVVKILQPLDREVQPVHY-LKIEARD------QARE 903
Query: 204 PAQVW 208
Q++
Sbjct: 904 EPQLF 908
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E Q+++++ A D G+ +E VTVDV D NDN P+F Q++Y ++ +
Sbjct: 2348 LDYERSRQHTILVRAVD-GGMPPLSSEVIVTVDVTDLNDNLPLFEQQIY-------EARI 2399
Query: 127 NSNVSHWKKFSSIGSVSATDADGDKVAYKL 156
+ + H + + + A +D K+ Y +
Sbjct: 2400 SEHAPHGHFVTCVKAYDADSSDVGKLQYSI 2429
>gi|449267132|gb|EMC78098.1| Protocadherin Fat 2 [Columba livia]
Length = 4375
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 91/194 (46%), Gaps = 33/194 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I GN + F++ +SG L+ T +D E+V+ Y L + T++
Sbjct: 1691 VSYEIKDGNGDGVFSMN------------YQSG-LISTQKSLDFEQVSFYQLKVRGTNMA 1737
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V+DENDN+P+F + + VG + + S + ++ ATDA
Sbjct: 1738 GA-FTDTIVLIYVIDENDNAPIFVKPSF---VGWIMENAPSQSMVLDESNAPLVTHATDA 1793
Query: 148 DGDK---VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDVEYELT------VEAHDLQS 196
D D + Y++ L + P TG L D++YELT V AHD +
Sbjct: 1794 DQDSNALLVYEILETEALKYFTVDPSTGTLTSRA-----DIDYELTPVFHFSVHAHDSGN 1848
Query: 197 PSRYAREPAQVWLQ 210
PS +A +PA+V +
Sbjct: 1849 PSLFASKPAKVTIH 1862
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 78/172 (45%), Gaps = 34/172 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I+ GND+ F + + + G+L V S +D E + Y L IT D+
Sbjct: 754 YVISDGNDDSCFTI------------DLELGLLQVLS-PLDHERTSFYILNITVYDLGTP 800
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K+ + V+VLD NDN+P F Q Y + + H ++I + A DAD
Sbjct: 801 QKSSWKLLAVNVLDTNDNTPKFPQGAYWVAIPE----------HVATGTTIAQLKAEDAD 850
Query: 149 GD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHD 193
D +V Y L P++ I TGE+ +TG + D E Y L +EA D
Sbjct: 851 TDDNGRVKYSLLSPTDKFAINSVTGEVTVTG---ALDRELWPYYVLKIEARD 899
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 71/155 (45%), Gaps = 22/155 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+RY I G++ F + + +R T S + LL +RE Y L+I AT
Sbjct: 72 IRYRIASGDNTGLFKTEEHVIGDFCFLRIRTRSSNTALL------NREVKDSYMLIIKAT 125
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+ +A V + +LD ND P+FS Y+ + + + L + V ++SA
Sbjct: 126 ESTFAYEAWAKVLIHILDRNDLKPLFSPPSYKVSIRE-DTPLKTVVC---------TLSA 175
Query: 145 TDADGDKVA---YKLAVPSNLVVIVPQTGELLLTG 176
TDAD + A Y L S+L + P TG ++ TG
Sbjct: 176 TDADAGQNAEFYYALNTKSDLFTVHPTTGAVMTTG 210
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
ST+ K+GVL VT G +D E +++ + ATD + +E V V+V D NDN PVFSQ
Sbjct: 2218 STDFKTGVLTVT-GQLDYELETKHTFTVKATDTALGSFSEARVEVEVEDVNDNPPVFSQM 2276
Query: 114 VY 115
+Y
Sbjct: 2277 IY 2278
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 13/164 (7%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH 95
N T++L P E R + L TS +DRE+ Y LV ATD G +
Sbjct: 3044 NAQITYSLHGPGAEEFRLGPHTGE---LTTSAPLDREQKPMYHLVAKATDGGG-RSCQAD 3099
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYK 155
+T+ V D NDN+P RF ++ N + + + + + +V Y
Sbjct: 3100 ITLIVEDTNDNAP-------RFFPSHCAVAVFDNTTTKTPIAVVAARDLDEGPNAEVVYS 3152
Query: 156 LAVPSNLVVIVPQTGELLLTGDPPSDD--VEYELTVEAHDLQSP 197
L+ +N + +T ++ P D +ELTV A D +P
Sbjct: 3153 LSDSANGHFSIEETTGVIRLEKPLKDSQHSAFELTVRATDRGTP 3196
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 30/181 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
++Y I GND+ F L S +G L + +G +D E +Y L I T
Sbjct: 3254 IKYEIVNGNDHGKFQLN------------SNTGALYI-NGSLDFEASHEYYLSIEGTRKG 3300
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+ ++ T V +++ D ND++P F Q Y D++ ++ V I +VSA D
Sbjct: 3301 SASLSDVTMVVINITDINDHAPEFIQDPY---FADIRE--DAAVGEI-----ILTVSADD 3350
Query: 147 ADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPSRY 200
DG +++ Y + P I P++G++ + +++ Y LTV A D P+++
Sbjct: 3351 LDGAMNNQITYSIVEGNPLGHFAIQPKSGQISIAKHLDREEIPSYSLTVRATDNGHPAQF 3410
Query: 201 A 201
+
Sbjct: 3411 S 3411
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-V 86
+ YSI +GN FA+ + KSG + + + +DREE+ YSL + ATD
Sbjct: 3359 ITYSIVEGNPLGHFAI------------QPKSGQISI-AKHLDREEIPSYSLTVRATDNG 3405
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
++ + + V D NDN P F Q Y +V
Sbjct: 3406 HPAQFSDVALHIHVSDVNDNPPRFFQLNYSVVV 3438
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 59/134 (44%), Gaps = 25/134 (18%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY--RFIVGDLKSSL 126
+DRE+ +Y L + A+D G +A T V + VLD NDNSP Q Y R G L
Sbjct: 2973 LDREDTEKYLLKVMASD--GKFQAITEVEIFVLDINDNSPECGQIFYTGRVSEGALPGLF 3030
Query: 127 NSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDD 182
I +SATD D ++ Y L P + + P TGE LT P D
Sbjct: 3031 ------------ILKISATDPDVGSNAQITYSLHGPGAEEFRLGPHTGE--LTTSAPLDR 3076
Query: 183 VE---YELTVEAHD 193
+ Y L +A D
Sbjct: 3077 EQKPMYHLVAKATD 3090
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 96/230 (41%), Gaps = 32/230 (13%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
S E +G + T+G +DRE + Y L + A D+ I + T + ++V D NDN P S+
Sbjct: 1083 SIEKDTGTIR-TTGPLDREGTSHYWLTVLALDLGTIPLSSVTEIYIEVTDTNDNPPQMSR 1141
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAV--PSNLVVIVP 167
V+ S + + +S+ + A D D K+ + + P L I
Sbjct: 1142 PVF----------YTSVMENSPPNTSVLQLDALDPDSSSEGKLTFHILTGNPQGLFTINL 1191
Query: 168 QTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDR 227
TG L++ D EY+ H L+ EPA L+ S V+ Q+L D
Sbjct: 1192 ITG--LISTTSRQLDREYK---AEHILEVAVSDNGEPA---LKSTSRVVI--QVLDANDS 1241
Query: 228 KSEAPHR-----IEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETE 272
PH+ + +R + P R+ S+ D I + +E+E E
Sbjct: 1242 PPTFPHKLFMVQLPERDASETPLPVYRLIASDRDQGQNSHITYTIEEEDE 1291
>gi|431918261|gb|ELK17488.1| Protocadherin-23 [Pteropus alecto]
Length = 3338
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 127/296 (42%), Gaps = 76/296 (25%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
H + Y I GN+ F L E K+GVL + +D EE +++L I A+
Sbjct: 2689 HAEILYHIISGNEKGHFHL------------EEKTGVLYLIK-PLDYEETIKFTLTIQAS 2735
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV-SHWKKFSSIGSVS 143
D + + + V V VLD+ND++P F + SSLN V + FS+I SV+
Sbjct: 2736 DEEKKHFSFAVVFVSVLDDNDHAPQF-----------MFSSLNCVVPENLPVFSTICSVN 2784
Query: 144 ATDADG---DKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDV------------EYELT 188
A D D ++ Y + P +++ VP E L DP + D+ +Y L
Sbjct: 2785 ALDFDAGPYGELTYSILSPCSIMHGVPPDQEPFLI-DPLTGDIHAKQVLDYEKDNKYCLI 2843
Query: 189 VEAHDLQSPSRYAREPAQVWL------QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTR 242
V+A D + VW+ +F QD+ + P + R++
Sbjct: 2844 VQAKDRGD----STASLMVWVDIEGTDEFEPIFTQDQYFFNL-------PEKNNIRQL-- 2890
Query: 243 AVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDE-NGDVRVKK 297
R++ S+ D ++G I+++LE + P+ +V++ NG++ + +
Sbjct: 2891 ----IGRVEASDADAGIDGVILYSLETPS-----------PFFSVNKTNGNIYLTR 2931
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 16/90 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
V YSI GN+N F L +S LL T+ +D E Q+ L + A D
Sbjct: 1645 VTYSILSGNENMAFMLD-------------ESSGLLTTTCSLDYEIKTQHILTLQALDSG 1691
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVY 115
+ ++ ++T +T+ VLD ND +P F Q +Y
Sbjct: 1692 IPALSSSQT-LTITVLDVNDETPAFKQHLY 1720
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 59/126 (46%), Gaps = 22/126 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI GN + F ++ T I + K LV ++DRE A + LVI A+D
Sbjct: 2577 VEYSIISGNSQNNFHVE---TSFIHSEYPFKQVGYLVLLHNLDRETSASHKLVILASDHG 2633
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS----V 142
+ T V+++VLD NDN P F+ Y +H K+ + +GS V
Sbjct: 2634 CPPLSSTAIVSIEVLDVNDNPPKFNTVKYH--------------AHVKESTPLGSHITVV 2679
Query: 143 SATDAD 148
SA+D D
Sbjct: 2680 SASDCD 2685
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH 95
N F+ + + + + +GV+++ +D EE +Y L+I +D ++ E
Sbjct: 2368 NSAFIFSFSKESNPGTKFAIDRNTGVVVLVK-TLDFEEATEYELLIQISD--SVHHTEGA 2424
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDL 122
+ V VLD NDN PVFSQ Y+ + +L
Sbjct: 2425 LIVRVLDVNDNPPVFSQDFYQVTIPEL 2451
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 16/121 (13%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
MEN ++GT + + L S + ++YSI GN++ F+L S SG
Sbjct: 2141 MENCEAGTSIVTVKALALDSIQDS---IKYSIFSGNEDGAFSLC------------SNSG 2185
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
L V EV + +I + G ++A + V + +LD NDN P F Q +Y+ V
Sbjct: 2186 ELTVKEPKFLDFEVRKEVQLIVLAESSG-HRAYSKVAILILDMNDNLPHFEQSIYQVSVS 2244
Query: 121 D 121
+
Sbjct: 2245 E 2245
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 42/86 (48%), Gaps = 16/86 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+ YSI GN F + ++ SG + G +D E + YSL++ ATD
Sbjct: 2268 LIEYSILSGNQGEAFHI------------DALSGEI-TADGILDYEHICSYSLIVQATD- 2313
Query: 87 KGINK--AETHVTVDVLDENDNSPVF 110
KG+ + T V + V D NDN+P F
Sbjct: 2314 KGMPRLSGTTVVKIQVTDVNDNAPTF 2339
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 14/84 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I GN FA+ N T+ E L T+ +DRE+V ++LVI +D+
Sbjct: 1854 VEYHIIDGNTGEYFAI-NETSGE------------LSTTHALDREQVNSFALVILCSDLG 1900
Query: 88 GINKAE-THVTVDVLDENDNSPVF 110
++ + V VLD+ND+SP F
Sbjct: 1901 DPPRSSIVQLQVRVLDDNDHSPFF 1924
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 60/139 (43%), Gaps = 16/139 (11%)
Query: 69 IDREEVAQYSLVITA--TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E V Y+ + A + + T V V VLDENDNSP F V V + S L
Sbjct: 1139 LDYESVQTYNFRVFARIPEDRLSQNVSTSVIVHVLDENDNSPTFLHDVLFLKVKE--SPL 1196
Query: 127 NSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELL-LTGDPPSDD 182
V IG ++A D D K ++Y L + P TGE++
Sbjct: 1197 PQGV--------IGKITAIDRDLGKNGQLSYFLLSDGKFFKMNPHTGEVISWVALDHEHQ 1248
Query: 183 VEYELTVEAHDLQSPSRYA 201
V+++LTV D SP R A
Sbjct: 1249 VQHQLTVLVTDHGSPPRNA 1267
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 72/156 (46%), Gaps = 28/156 (17%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE-EVAQYSLVITATD 85
L+ YS+ G ++ P +I + + G + V S DIDRE + Y L++ A D
Sbjct: 686 LIEYSLYDGFQSY----GAPQAFQI----DPRDGQICV-SQDIDREKDPDTYDLLVKARD 736
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G++ A+ V V++ D NDN PVF+ Y + S + + I V AT
Sbjct: 737 GGGLS-AQAFVRVELEDVNDNEPVFNPSTYATTIS----------SQTQSGTEIVHVLAT 785
Query: 146 DADG---DKVAYKLAVPSN---LVVIVPQTGELLLT 175
D D V Y+L +PS+ L I TG + LT
Sbjct: 786 DRDSGIHGTVTYEL-LPSDLSSLFTIDSPTGIIYLT 820
>gi|9256610|ref|NP_061758.1| protocadherin beta-15 precursor [Homo sapiens]
gi|13431379|sp|Q9Y5E8.1|PCDBF_HUMAN RecName: Full=Protocadherin beta-15; Short=PCDH-beta-15; Flags:
Precursor
gi|5457037|gb|AAD43755.1|AF152494_1 protocadherin beta 15 [Homo sapiens]
gi|14009449|gb|AAK51610.1|AF217742_1 protocadherin-beta15 [Homo sapiens]
Length = 787
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ K E +TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTEGALDRETRAEYNITITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP 159
NS H IGSVSATD D +V Y L P
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPP 493
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVY 115
LV ++DREE A+ L +TA D ++ T + + VLD NDN+P F Q +Y
Sbjct: 194 LVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFVQALY 247
>gi|149048782|gb|EDM01323.1| similar to FAT tumor suppressor homolog 4 (predicted) [Rattus
norvegicus]
Length = 1155
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 74/153 (48%), Gaps = 28/153 (18%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ V+YSI+ G+ + R +KSGV+ T +DREE Y L I A
Sbjct: 720 PNGTVKYSISAGDRS-------------RFQIHAKSGVI-STKMALDREEKTAYQLQIVA 765
Query: 84 TDVKGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
TD + ++ VTV VLD DN PVFSQ Y F+V + NV+ +GSV
Sbjct: 766 TDGGNLQSPSQAIVTVTVLDTQDNPPVFSQAAYSFVVFE-------NVALGYH---VGSV 815
Query: 143 SATDADGD-KVAYKLAVPS--NLVVIVPQTGEL 172
SAT D + ++Y + + + P TG+L
Sbjct: 816 SATTMDLNANISYLITTGDQRGMFAMNPVTGQL 848
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 75/174 (43%), Gaps = 29/174 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ NP T + L T+ IDREE + Y L + A+
Sbjct: 826 ISYLITTGDQRGMFAM-NPVTGQ------------LTTASVIDREEQSFYQLRVVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G + V + V D NDN+P F Q V S+++ V +W+ SI A D
Sbjct: 871 GAVTGDAVVNITVKDLNDNAPHFLQAV---------ESIDA-VENWQAGHSIFQAKAVDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSP 197
D +V Y L P NL I Q G + L G Y++ + A D+ P
Sbjct: 921 DEGVNGRVLYSLKQNPKNLFTINEQNGNISLLGTLDVHAGSYQVEIVASDMGVP 974
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 83/195 (42%), Gaps = 40/195 (20%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVL-LVTSGDIDREEVAQYSLVITATDVKG 88
Y I +GN+ F L +I + + L LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIVRGNEAGRFRL------DITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KG 226
Query: 89 INKAETH--VTVDVLDENDNSPVFSQKVYR------FIVGDLKSSLNSNVSHWKKFSSIG 140
K + V V V D NDN PVF Y+ +VG SS+
Sbjct: 227 EPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVG----------------SSVL 270
Query: 141 SVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDL 194
V+A DAD + Y+L + P+TG L+T P D +Y LTV+A D
Sbjct: 271 QVAAADADEGTNADIRYRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTVQATDR 328
Query: 195 QSPSRYAREPAQVWL 209
PS R A + L
Sbjct: 329 GVPSLTGRAEALIQL 343
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVF 110
L T +DREE A Y L+I ATD+ ++ T V V +LD NDNSPVF
Sbjct: 641 LSTISSLDREEQAFYCLLILATDLGSPPQSSTVQVNVSLLDINDNSPVF 689
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 27/123 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y+IT GN F + G L + S ++DRE +Y L++ A+D +
Sbjct: 1031 IAYAITDGNSGEAFGIF-------------PDGQLYIKS-ELDRELQDRYVLLVVASD-R 1075
Query: 88 GIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ A +VTV + D NDN P+F+ Y F + + S +G VSA
Sbjct: 1076 AVEPLSATVNVTVILEDVNDNRPLFNSTNYTFYFEE----------EQRAGSFVGKVSAV 1125
Query: 146 DAD 148
D D
Sbjct: 1126 DKD 1128
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 14/87 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYSI GN F + +E V +G +DRE +Q L I+A D +
Sbjct: 510 LRYSIVSGNGLGWFHI-----------SEHSGLVTTSAAGGLDRELASQIVLNISARD-Q 557
Query: 88 GINKAETH--VTVDVLDENDNSPVFSQ 112
G++ ++ + V VLD ND PVFSQ
Sbjct: 558 GVHPKVSYAQLVVSVLDVNDQKPVFSQ 584
>gi|307179930|gb|EFN68065.1| Putative fat-like cadherin-related tumor suppressor-like protein
[Camponotus floridanus]
Length = 3508
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 105/249 (42%), Gaps = 42/249 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+VT +DREE +Y + + A D G V V V DENDNSPVF + Y+ +
Sbjct: 1372 IVTRKKLDREEQKRYEIPVMAMDGGG-RSGFVMVRVKVGDENDNSPVFLLREYK---ATI 1427
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKL-----AVPSNLVVIVPQTGELLL 174
+ +L+ N S K V A DAD D K+ Y + + +L I P TG L L
Sbjct: 1428 QGNLSINTSFLK-------VKAQDADEDEAAKITYSIYDLQTSPAKSLFGINPDTGSLYL 1480
Query: 175 TGDP-PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPH 233
P ++ +EL + A D + + +A P ++ ++ + + +RK +
Sbjct: 1481 QKSAVPWENQLFELFIRAEDRGTITHHADVPLSIY------IMGPHDIAPLFERKEDKFF 1534
Query: 234 RIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDV 293
E V + K + T+ + RIV E NP T+D +G +
Sbjct: 1535 IREDSSVGTPITKLKTV----TNSTVTYRIVSGDEN------------NPLFTIDSHGQI 1578
Query: 294 RVKKRWDFE 302
+ + D E
Sbjct: 1579 TLARPLDRE 1587
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 21/114 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN + GT VK + SS +++ I +GN N TF + NP+T GV
Sbjct: 498 ENQQLGTYVKHVEARSTSS-------LQFEIVRGNRNDTFFV-NPST-----------GV 538
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
+++ + +D E Y+L ++AT++ G + A +V + VLD NDN+P F Q +Y
Sbjct: 539 IVIKN-QLDYENTKFYNLTVSATNMAGAS-ATCNVIIHVLDRNDNAPRFLQALY 590
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 55/123 (44%), Gaps = 31/123 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN++ F + +K+GV+++ +D E Y L I A D
Sbjct: 2077 IYYSIVGGNEHKKFQIN------------AKTGVIIIAE-QLDYERARDYFLTIQAVD-G 2122
Query: 88 GINKAETHVTVD--VLDENDNSPVFSQKVYRFIV---------------GDLKSSLNSNV 130
GI H TV+ V D NDN+P+FS+ YR V DL S N N+
Sbjct: 2123 GIPPLSNHATVNITVTDSNDNAPIFSEVSYRAFVREDAKIGEKVTQVYANDLDSEENGNI 2182
Query: 131 SHW 133
S++
Sbjct: 2183 SYY 2185
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 15/93 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-VKG 88
YSIT+GND FAL + +GV+ V ++D E+ QY L + ATD V G
Sbjct: 1040 YSITKGNDFEEFAL------------DFNTGVIYVVD-ELDYEQKKQYELTVRATDSVSG 1086
Query: 89 INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+ AE V++ VLD ND P F+Q Y + +
Sbjct: 1087 V-YAEVLVSILVLDVNDCPPEFTQDSYNISISE 1118
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 15/163 (9%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT----DVKGINK 91
N++ F++ NPT + T SG + T DRE Y L++ A D +
Sbjct: 829 NEHIVFSILNPTDMFVIGPT---SGAIRTTGVRFDREVCDHYELIVEAKSHPPDQEKPRV 885
Query: 92 AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK 151
A V V +LD NDN P+F Y +V + + + + + ++ D +
Sbjct: 886 AHVIVNVTILDINDNCPMFVNLPYYAVV-------SVDAQKGEVITKVHAIDMDSGDNGE 938
Query: 152 VAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHD 193
V Y+L L + +TGE+ L + + EY+LT+ A+D
Sbjct: 939 VRYELKKGHGELFKVCRKTGEISLKQNLEGHNREYQLTIAAYD 981
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDV--LDENDNSPVFS 111
S + K+G ++V + +DREE+A Y L + A D GI + V V++ LD NDN P+FS
Sbjct: 2196 SIDRKTGQIIV-AAPLDREEIASYVLEVHARD-NGIPMLSSFVMVNIEILDANDNPPLFS 2253
Query: 112 QKVYRFIV 119
Y IV
Sbjct: 2254 LPNYTAIV 2261
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 133/328 (40%), Gaps = 60/328 (18%)
Query: 6 SGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVT 65
S G L +L P+ +R+ +T G++N F+L + ++GVL T
Sbjct: 1847 SHPGAYVLTVLATDYDDEPNAKLRFYLT-GDNNDKFSL------------DRETGVLK-T 1892
Query: 66 SGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
G +DRE A+YSL+ D K + + + + V D NDN+P F+ + Y S
Sbjct: 1893 VGQLDRETQAKYSLMAHVQDRDKPTWECSSQLEILVSDLNDNAPKFTMQTY-------SS 1945
Query: 125 SLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD 181
+L +V + + + V ATD D K+ Y+ ++ ++ ++ P
Sbjct: 1946 TLPEDV---EVGTLVTKVHATDDDIGINRKIRYEFIDSADGHFLIAADSGIVTLAKPLDR 2002
Query: 182 DVE--YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRR 239
+ + Y +T++A D +P V +Q + D E +I +
Sbjct: 2003 ETKAMYNVTIQALDQGTPQLMGIASLIVNVQ------------DINDNPPEFASKIYFAK 2050
Query: 240 VTRAVR---PTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
V R+ + D + I +++ E +KF+I + I +
Sbjct: 2051 VPEIYAIGTEVARVLATSKDTGINADIYYSIVGGNEHKKFQINAKTGVIIIA-------- 2102
Query: 297 KRWDFEELGPEKTIDFWVTINNQATNGG 324
E+L E+ D+++TI QA +GG
Sbjct: 2103 -----EQLDYERARDYFLTI--QAVDGG 2123
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 16/94 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ + IT G+ F +IR++ E + + +DRE + +Y L I TD K
Sbjct: 1768 IEFYITSGDPRSQF--------QIRSTGE------VYVAKSLDRETIDRYELEIIGTDGK 1813
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+ ET VTV VLD NDN P + YR I+ +
Sbjct: 1814 YV--FETKVTVQVLDVNDNPPYCLRYRYREILSE 1845
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 21/135 (15%)
Query: 77 YSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKF 136
Y+L I TD G++ A T + V V+D ND+ P F++ YR ++ NV +K
Sbjct: 245 YNLTIGVTD--GVHTALTQLLVTVIDINDHRPEFTESTYRV-------DISENVEEGEK- 294
Query: 137 SSIGSVSATDADGD-KVAYKL-AVPSNLVVIVPQTGELL--LTGDPPSDD---VEYELTV 189
I + ATD D D KV Y L A + + + +L +T + P D E+ LTV
Sbjct: 295 --ILQLHATDEDEDKKVFYSLHAAQTQASLEIFHVDSVLGSITLNKPLDRETIEEHVLTV 352
Query: 190 EAHDLQSPSR--YAR 202
D +P++ YAR
Sbjct: 353 MVKDQGTPAKRNYAR 367
>gi|291239053|ref|XP_002739439.1| PREDICTED: FAT tumor suppressor homolog 4-like [Saccoglossus
kowalevskii]
Length = 3169
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 30/147 (20%)
Query: 4 SKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLL 63
S S T V L ++ + P+ + YSIT G++ + N T + +
Sbjct: 2393 STSPTAV--LTVVAIDADTGPNAEIMYSITVGHNGEFYIDLNGTIYAV------------ 2438
Query: 64 VTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGD 121
G++DREEV Y+L +TATD G+ + V+VD++ D NDN+P F+Q+ Y
Sbjct: 2439 ---GNVDREEVPLYTLTVTATD-NGVQPQSSTVSVDIIVTDINDNTPTFTQRHY------ 2488
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
S+ NV ++ + I V ATDAD
Sbjct: 2489 -NGSVEENVQYYIE---IVHVIATDAD 2511
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 21/126 (16%)
Query: 2 ENSKSGTGVKGLPILVAS-SHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
ENS +GT V +P + A+ S + + Y+IT G D++ F + +S +G
Sbjct: 1107 ENSATGTTVTMIPCIDATDSDAGLNASIVYTIT-GEDSNQFQI------------DSITG 1153
Query: 61 VLLVTSGDI----DREEVAQYSLVITATDVKGINKAETHVT---VDVLDENDNSPVFSQK 113
++ T +I DRE+ Y LV+TA+D G+N++ + + + + D NDN+P+F +
Sbjct: 1154 IITTTDNEIVLNLDREDKDVYQLVVTASDRNGLNESLSSIVPIIITINDVNDNAPIFDES 1213
Query: 114 VYRFIV 119
Y F V
Sbjct: 1214 YYYFSV 1219
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 34/149 (22%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDI----DREEVAQYSLVITA 83
V Y++T GND+ F + ++ +G++ T D+ DRE+++ Y LV+TA
Sbjct: 935 VLYTLT-GNDSDQFHI------------DANTGIITTTGDDVTPILDREKISLYHLVVTA 981
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF---------------IVGDLKSSLNS 128
D G + + + + V D NDN+P+F + VY F + D+ + +NS
Sbjct: 982 HD--GTHNSTVPINITVNDVNDNAPLFEEAVYHFNVSEDATVGTTVGLVVAQDMDTGINS 1039
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAYKLA 157
++++ S G S G LA
Sbjct: 1040 RLTYFLVGGSDGKFSVDPVSGAVFVLILA 1068
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%), Gaps = 5/69 (7%)
Query: 56 ESKSGVLLVTSGD--IDREEVAQYSLVITATDVKGINKAETH---VTVDVLDENDNSPVF 110
++K+G++ T+ D +DRE V+ Y LV+TA D N + + +T+ V D NDNSP+F
Sbjct: 631 DNKTGIITSTANDTDLDRENVSSYQLVVTAYDRDAQNGSRSSSAPITILVNDVNDNSPMF 690
Query: 111 SQKVYRFIV 119
+ F V
Sbjct: 691 QNTFFNFTV 699
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 72/293 (24%), Positives = 133/293 (45%), Gaps = 37/293 (12%)
Query: 2 ENSKSGTGVKGLPILVAS-SHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
ENS T V +P++ A+ + + + + YS++ G+ ++ F + T I + ++ +
Sbjct: 375 ENSPPNTTVIMVPLIEATDADINDNSAIVYSLS-GDGSYHFQIDELTG--IIKTVDNNTA 431
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+ ++DRE + Y + I+A D + ++ T VT+D+LD NDNSPVFS +Y +
Sbjct: 432 L------NLDREVRSSYVINISAYDTGNPVLESYTVVTIDILDINDNSPVFSFDLY---I 482
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKL-AVPSNLVVIVPQTGELLLTG-D 177
G ++ S + S + +V ATD D + A + ++ S VI TG++ D
Sbjct: 483 GSIEESAPLD-------SYVLTVRATDDDEETNADVIYSINSTDFVIDTVTGDVTTASQD 535
Query: 178 PPSDDV---EYELTVEAHDLQSPSRYAREPAQVW-LQFNSPVLQDEQLLQMIDRKSEAPH 233
+D +E V A D + S + Q+ N+PV + ID S +
Sbjct: 536 FDFEDANARSFEFAVTATDCGNLSSTSVVRVQILDSNDNAPVFTENDYFGYIDENSVSGT 595
Query: 234 RIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWIT 286
+ R + + D + +V+ L E ++F+I ++ IT
Sbjct: 596 TVVINRYIETI---------DADIGLNAAVVYTLTGEG-SDQFQIDNKTGIIT 638
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHV--TVDVLDENDNSPVFSQKVY 115
+GVL V + +DRE A+Y + I+A+D G+ T++ +++LD NDN P F+Q Y
Sbjct: 2020 NNGVLSV-ADTLDREYKAKYVITISASD-HGVPILTTYIEMVIELLDVNDNQPTFTQNAY 2077
Query: 116 R 116
R
Sbjct: 2078 R 2078
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 15/152 (9%)
Query: 48 THEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DEND 105
T + T +KS + T+ ++RE YS ++A+D+ GI K + + V++L D ND
Sbjct: 2315 TSHVEEFTINKSTGDIYTAMKLNRELKDWYSFSVSASDIDGI-KYDAYSLVNILVNDIND 2373
Query: 106 NSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL 162
N+P+F + YR V + S + +++ +V A DAD ++ Y + V N
Sbjct: 2374 NNPIFDRPSYRGEVYERDYSTSP--------TAVLTVVAIDADTGPNAEIMYSITVGHNG 2425
Query: 163 VVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
+ G + G+ ++V Y LTV A D
Sbjct: 2426 EFYIDLNGTIYAVGNVDREEVPLYTLTVTATD 2457
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 66/136 (48%), Gaps = 31/136 (22%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V Y I QGND F + + + EIR T+G IDRE A LV++A D
Sbjct: 2732 IVYYEIIQGNDEGFFEI-HINSGEIR------------TNGTIDRELEAFVYLVVSAYD- 2777
Query: 87 KGINKAETHVTVDV--LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
G+ + + T+D+ LD NDN+P VY S ++S + H + + V+
Sbjct: 2778 GGLPSKQDNATIDITLLDVNDNAP----SVY-------PSEMHSCIYHDSPIGTFVVDVN 2826
Query: 144 ATDAD--GDKVAYKLA 157
ATD D GD + Y L+
Sbjct: 2827 ATDPDMIGD-ITYSLS 2841
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 57 SKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKV 114
S+SG + + S +DREE A+Y L ++ +D GI+ + T V + +LD NDNSP+F
Sbjct: 741 SESGAIFILS-QLDREETARYVLNMSVSD-SGIDILRDFTKVEIHLLDVNDNSPMFDSDN 798
Query: 115 Y 115
Y
Sbjct: 799 Y 799
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 63 LVTSGDIDRE--EVAQYSLVI-TATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
+VT GDIDRE + +++VI + + HVTV LD NDN P+FSQ +Y
Sbjct: 1588 IVTDGDIDREVNQTITFTVVIQNQYNTVTVKYVPVHVTV--LDINDNVPIFSQTIY 1641
>gi|198475669|ref|XP_001357109.2| GA17399 [Drosophila pseudoobscura pseudoobscura]
gi|198137906|gb|EAL34175.2| GA17399 [Drosophila pseudoobscura pseudoobscura]
Length = 4959
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 102/244 (41%), Gaps = 46/244 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+ +G +DRE+ +Y L + A+D G +AET +T+ + D+NDN+P F Y F +L
Sbjct: 2746 ITVAGHLDREQEDEYILKVVASD--GAWRAETPITITIQDQNDNAPEFEHSFYSFSFPEL 2803
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELLLTGDP 178
+ +G + ATD D ++Y L PS + I P TGE+
Sbjct: 2804 ----------LHPVALVGQIIATDRDKLGPNSVISYSLQQPSPMFSIDPATGEIF----- 2848
Query: 179 PSDDVEYELTVEAHDLQSPSRYAREPAQVWL------QFNSPVLQDEQL--LQMIDRKSE 230
++Y+ S+Y R P ++ P L E L + ++D K+
Sbjct: 2849 SKKAIQYKR----------SQYVRSPENMYALTILATDNGKPPLYSECLVNINIVDAKNN 2898
Query: 231 APHRIEKRRVT---RAVRPTKRI-DFSETDGEMEG---RIVFALEKETEREKFKIRDENP 283
P + ++ RP +RI TD + G + +AL F I +
Sbjct: 2899 PPKFEQAAYLSPLPEHARPGQRIVQVHATDKQDMGAANEMDYALVYGNLSAFFAIGKHDG 2958
Query: 284 WITV 287
WI++
Sbjct: 2959 WISL 2962
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 18/142 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
LV + +DRE ++Y + I +D G+ ET++ ++V D NDN P+F + VY F + +
Sbjct: 1650 LVLNDTLDRETKSKYDVRIRVSD--GVQYTETYIAIEVSDTNDNPPMFEESVYSFDIPE- 1706
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV--PSNLVVIVPQTGELLLTGD 177
+ + +G V A DAD +++Y + +++ + PQTG L LT
Sbjct: 1707 ---------NAPRGYQVGQVVARDADLGQNSQLSYGVVSDWANDVFSLNPQTGMLTLTAR 1757
Query: 178 PPSDDVE-YELTVEAHDLQSPS 198
++V+ Y L V+A D PS
Sbjct: 1758 LDYEEVQHYILIVQAQDSGQPS 1779
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 60/143 (41%), Gaps = 13/143 (9%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
+Y I GN +H F L T N + S + L T+G++DRE Y L I+A D
Sbjct: 208 QYEIVNGNVDHKFRLATTT-----NPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGS 262
Query: 89 INK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ V V +LD NDN P+F D SLN ++ +
Sbjct: 263 PPRLGFLQVNVTILDVNDNPPIFDHS-------DYNVSLNETAVAGTPVVTVMASDNDLG 315
Query: 148 DGDKVAYKLAVPSNLVVIVPQTG 170
D K+ Y LA + + P+TG
Sbjct: 316 DNSKLTYYLAETEHQFTVDPETG 338
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 26/149 (17%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFAL-KNPTTHEIRNSTESKSG 60
EN+ +GT V + ++ + + R I GN+ F L K P H +R
Sbjct: 414 ENAVNGTVVAAVSVIDSDDGLNGETTTR--IVSGNELGHFRLEKTPLFHIVR-------- 463
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIV 119
+G +DREE+ +Y+L + A D + T H+ +DV D ND+ PVF + Y ++
Sbjct: 464 ----VNGVLDREEIGKYNLTVVAMDRGTPARITTAHLIIDVNDVNDHEPVFEKSEYSAVL 519
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+L + S + S++ATD D
Sbjct: 520 SELAPT----------GSYVASITATDED 538
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 60/133 (45%), Gaps = 30/133 (22%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
YSI GN F + + + EIR T+ +DRE++A YSLVI A D G+
Sbjct: 3363 YSIINGNLKQGFKI-DVQSGEIR------------TAARLDREDIAHYSLVIGAIDT-GL 3408
Query: 90 --NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
V +D+ D NDN PVF+ + V + + +SI ++SATD
Sbjct: 3409 PPQTGSATVRIDLDDVNDNGPVFAPEGLLGYVSE----------NEPAGTSIMTLSATDP 3458
Query: 148 D----GDKVAYKL 156
D G Y+L
Sbjct: 3459 DLPRNGGPFTYQL 3471
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 62/135 (45%), Gaps = 29/135 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I GN+ F++ T L+ T+G +DRE L I+A D
Sbjct: 545 VHYEILSGNELKWFSIDAATG-------------LIATAGALDREIKDSVELSISARD-G 590
Query: 88 GINK--AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G N A T + V VLDEND +P F Q+ L SL+ +V+ S + +++AT
Sbjct: 591 GPNPKFAYTQLKVTVLDENDEAPQFGQQ-------QLNVSLSEDVAPQ---SLVCTLTAT 640
Query: 146 DAD---GDKVAYKLA 157
D D VA+ LA
Sbjct: 641 DHDQGTNGSVAFSLA 655
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 16/102 (15%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ ++RY+I+ GN+N F + + ++G +L+ +D + V +Y L IT
Sbjct: 3040 PNGMLRYAISGGNENRDFMV------------DERTGGILIRQ-QLDYDLVQEYHLNITV 3086
Query: 84 TDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLK 123
D+ G A +T+ + D NDN P+F+Q Y V + K
Sbjct: 3087 QDL-GFKPLSAVALLTIILTDVNDNPPLFNQSEYHGYVAENK 3127
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 11/81 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE + Y L ITA D +A T + V +LDENDNSPVF K Y V + N
Sbjct: 2014 LDRELRSSYVLNITARDRGEPPQATTTQLLVRILDENDNSPVFDPKQYSASVAE-----N 2068
Query: 128 SNVSHWKKFSSIGSVSATDAD 148
+++ + + VSATD D
Sbjct: 2069 ASIG-----AMVLQVSATDVD 2084
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 29/178 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYSI G+ N F++ T GV+ V +++ E A+Y+L + A D
Sbjct: 2091 IRYSIMTGDQNQDFSISEDT------------GVVRVAK-NLNYERNARYTLTVRAEDCA 2137
Query: 88 GINKAE--THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
N A + + +LD NDN P F Y V +++++ N + + +V+A
Sbjct: 2138 VENSASDTAELIIGILDINDNRPTFLDSPYLARV--MENTVPPNDGY------VLTVNAY 2189
Query: 146 DAD----GDKVAYKLA-VPSNLVVIVPQTGEL-LLTGDPPSDDVEYELTVEAHDLQSP 197
DAD +V Y L S+L I TG + LL EY LT+ A D SP
Sbjct: 2190 DADTPPLNSQVRYFLKEGDSDLFRINASTGAIALLKQLDRETQSEYILTLVAMDTGSP 2247
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 15/93 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y I +GN + F + G L V + +DREE Y+L ++ D
Sbjct: 857 ISYEIIEGNADRMFGV-------------FPDGYLFVRA-PLDREERDYYALTVSCQDSG 902
Query: 88 GINKAET-HVTVDVLDENDNSPVFSQKVYRFIV 119
+++ V + V+DENDN+P F+ + F +
Sbjct: 903 DPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSI 935
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTV--DVLDENDNSPVFS 111
S ++G+L +T+ +D EEV Y L++ A D G T +TV +VLD NDN+P+F
Sbjct: 1744 SLNPQTGMLTLTA-RLDYEEVQHYILIVQAQD-SGQPSLSTTITVYCNVLDLNDNAPLFD 1801
Query: 112 QKVY 115
Y
Sbjct: 1802 PMSY 1805
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 15/87 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
V Y + +GN F+L + T L + +DRE + L++ A D
Sbjct: 1085 VYYFLAKGNGAGLFSLDSATGQ-------------LTLARKLDRESQDVHHLIVEARDAA 1131
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQ 112
+KG + +++ VLDENDN+P F+Q
Sbjct: 1132 LKGPLSSNATISIVVLDENDNAPEFTQ 1158
Score = 37.4 bits (85), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 3/75 (4%)
Query: 49 HEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDN 106
H R ++ +GV+ T+ +DREE A Y L + A D + + ++T+ V D NDN
Sbjct: 2312 HMARFHIDTDTGVI-TTATVLDREETAVYHLTLMAQDSSITEPRASSVNLTITVGDVNDN 2370
Query: 107 SPVFSQKVYRFIVGD 121
P F Y V D
Sbjct: 2371 EPKFESGSYSIAVPD 2385
>gi|339258508|ref|XP_003369440.1| putative cadherin domain protein [Trichinella spiralis]
gi|316966325|gb|EFV50919.1| putative cadherin domain protein [Trichinella spiralis]
Length = 584
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 119/279 (42%), Gaps = 48/279 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + +Y I GN N+ F L +T +I N +L + +DRE+ +Y L ++A
Sbjct: 149 PYDVQKYQIVSGNVNNAFRL---STRKINN--------ILYVNMPLDREQRERYILKVSA 197
Query: 84 TDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGS 141
+D ++ V V ++D NDN+P F + Y F V D +H F S I +
Sbjct: 198 SDGGQPPLSDVLTVNVTIVDVNDNAPQFDKPRYDFHVND---------AHAITFGSPIAA 248
Query: 142 VSATDADG---DKVAYKLAVPS-----NLVVIVPQTGELLLTGDPPSDDVEYELTV---- 189
V A D D ++ Y LA PS L I P+TG + T YEL V
Sbjct: 249 VHAKDLDAGVNGEIEYSLA-PSAVNDHRLFSINPKTGLISWTSTQQMQARHYELLVIARD 307
Query: 190 ------EAHDLQSPSRYAREPAQVWLQF-------NSPVLQDEQLLQMIDRKSEAPHRIE 236
EA+ L S + +VW++ ++ VL++ L +I R S + +
Sbjct: 308 GGQQPMEANCLVMISTSSSSVGKVWMRTVFLSSDGSASVLENATLGTLIFRVSVSNAQKA 367
Query: 237 KRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREK 275
R ++ R D + + L+KE +RE+
Sbjct: 368 NLRCVMSIETDDRNDVFQIQTSDDIHYYVTLQKELDREQ 406
>gi|440903408|gb|ELR54072.1| Protocadherin Fat 1 [Bos grunniens mutus]
Length = 4588
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 123/298 (41%), Gaps = 44/298 (14%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G+ V H V Y I GN F + NP + I +T +D
Sbjct: 1681 GVGSFVGMVTAHSQSSVVYEIKDGNVADAFDI-NPHSGSI------------ITQKALDF 1727
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E + Y+L I T++ G++ T V V +LDENDN PVF Q Y ++ + +S+NS V
Sbjct: 1728 ETLPIYTLTIQGTNMAGLS-TNTTVLVHLLDENDNLPVFVQAEYTGLISE-SASINSVVL 1785
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVE 184
+ + + ATDAD + + Y + PS I TG + +L+ D +
Sbjct: 1786 TDRNVPLV--IRATDADRESNALLVYHIVEPSVHKYFTIDSSTGAIHTVLSLD-YEETST 1842
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAV 244
+ TV+ HD+ +P +A A V + +ID P +
Sbjct: 1843 FHFTVQVHDMGTPRLFAEYAANV-------------TIHVIDINDCPPVFSTSLYEASLL 1889
Query: 245 RPTKR------IDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
PT R ++ ++ D ++++++ + EKF + + ITV +R +
Sbjct: 1890 LPTYRGVKVVAVNATDADSSAFSQLLYSITEGNIGEKFLMNRKTGTITVQNTTQLRSR 1947
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 107/247 (43%), Gaps = 49/247 (19%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + YSI GN++ F++ +SK+G + + +
Sbjct: 3246 GTEVLQVYAASRDIEANAEITYSIISGNEHGKFSI------------DSKTGAIFIIE-N 3292
Query: 69 IDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+D E +Y L + ATD + ++ V+++V D NDN+PVFSQ Y +V + + L
Sbjct: 3293 LDYESSHEYYLTVEATDGGSPSLSDVATVSINVTDINDNAPVFSQDTYTAVVSE-DAVLE 3351
Query: 128 SNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSDD 182
S+ +V A DADG + Y + + I P GE+ +T +
Sbjct: 3352 ---------QSVITVMADDADGPSNSHIHYAIIDGNQGSPFTIDPARGEVKVTKLLDRET 3402
Query: 183 VE-YELTVEAHDLQSPSR-------------------YAREPAQVWLQFNSPVLQDEQLL 222
+ Y LTV+A D SP R ++RE + +Q N P+ L
Sbjct: 3403 ISGYTLTVQASDNGSPPRVTTTTVNIDVSDVNDNAPVFSRENYSLIIQENKPMGFSVLQL 3462
Query: 223 QMIDRKS 229
+ DR S
Sbjct: 3463 VVTDRDS 3469
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + +P +RY I G++ + F + + +R T+
Sbjct: 45 ENSAAKTYV-GHPVKMGIYMTNPLWELRYKIISGDNENLFKAEEYVLGDFCFLRIRTKGG 103
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A T V V VLD ND P+FS Y
Sbjct: 104 NTAIL------NREVKDHYTLIVKAVEKNTNAEARTKVRVQVLDTNDLRPLFSPTSYSV- 156
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 157 ------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGTIVLT 207
Query: 176 G 176
G
Sbjct: 208 G 208
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 13/89 (14%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y IT GN F++ SK+G++ T+ +DRE+ ++ L +T TD
Sbjct: 1176 YKITSGNPQGFFSIN------------SKTGLITTTARKLDREQQDEHILEVTVTDNGSP 1223
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRF 117
K+ T V V +LDENDN P F QK Y+
Sbjct: 1224 PKSTITRVIVKILDENDNKPQFLQKFYKI 1252
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 78/175 (44%), Gaps = 36/175 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N I+N + + +DREE Y L ITATD
Sbjct: 2954 VTYYITGGDPLGQFAIEN-----IQNEWK------VYVKKPLDREERDSYLLTITATD-- 3000
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS--IGSVSAT 145
G ++ V V VLD NDN+PV + +Y S+ F I VSAT
Sbjct: 3001 GTFSSKAIVEVKVLDANDNTPVCEKTLY------------SDTIPEDAFPGKLIMQVSAT 3048
Query: 146 DAD---GDKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHD 193
DAD ++ Y L P + + P TGEL + P D E Y L V+A D
Sbjct: 3049 DADIRSNAEITYTLFGPGAEKFKLNPDTGELKTSA--PLDREEQAAYHLLVKATD 3101
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 109/271 (40%), Gaps = 47/271 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
L TS +DREE A Y L++ ATD G + V + + D NDN+P FS Y V
Sbjct: 3079 LKTSAPLDREEQAAYHLLVKATDGGG-RFCQASVVLTLEDVNDNAPEFSADPYTITV--- 3134
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVIVPQTGELLLTGDPP 179
+ + + + V ATDAD K++Y L ++ + + ++ P
Sbjct: 3135 -------FENTEPGTLLTRVQATDADAGLNRKISYSLLNSADGQFSINELSGIIQLEKPL 3187
Query: 180 SDDVE--YELTVEAHDLQSPSRYAREPAQVW----LQFNSPVLQDEQLLQMIDRKSEAPH 233
+++ Y LT++A D P R V + N PV + + + +
Sbjct: 3188 DRELQAVYTLTLKAVDHGLPRRLTATGTIVISVLDINDNPPVFEYREYGATVSE--DILI 3245
Query: 234 RIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDV 293
E +V A R D E I +++ E KF I + I + EN D
Sbjct: 3246 GTEVLQVYAASR----------DIEANAEITYSIISGNEHGKFSIDSKTGAIFIIENLDY 3295
Query: 294 RVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
E + ++++T+ +AT+GG
Sbjct: 3296 -------------ESSHEYYLTV--EATDGG 3311
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 14/87 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ GN++ F + + ++G+L + S +DRE +Y+L IT +D+
Sbjct: 754 YAVSGGNEDSCFIM------------DMETGMLKILS-PLDRETTDRYTLNITVSDLGLP 800
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVY 115
+A H+ + VLD NDN P F Q+ Y
Sbjct: 801 QRAAWHLLEIRVLDANDNPPEFLQESY 827
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 13/88 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSIT+G+ F + T GV+ V + +D E Y L I ATD
Sbjct: 2214 VHYSITEGDPFSQFTVNFNT------------GVISVVA-PLDFESHPAYKLSIRATDSL 2260
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVY 115
AE V + V D NDN PVF+Q+ Y
Sbjct: 2261 TGAHAEVFVDIIVEDINDNPPVFAQQSY 2288
>gi|7506590|pir||T15276 hypothetical protein R10F2.1 - Caenorhabditis elegans
Length = 2163
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 21/162 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITA-TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L +G IDRE+ A + + ++ K + V VLDENDN PVF+ Y
Sbjct: 1597 LFVAGPIDREQRATHEFQVEIDNEMMTSQKVQCKCHVIVLDENDNLPVFTSVAYYL---- 1652
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPS--NLVVIVPQTGELLLT- 175
SL +++H +K IG + A+D D +V+Y++ + N+V + P TG + L
Sbjct: 1653 ---SLKDSMAHGQK---IGQIMASDQDSGENGRVSYRILSGNDLNIVTLNPDTGSIQLNE 1706
Query: 176 -GDPPSDD---VEYELTVEAHDLQSPSRYAREPAQVWLQFNS 213
D D+ +++ VEA D P+R A QV L+ +S
Sbjct: 1707 WNDAQLDEFPNATWQILVEARDHGHPARAAVGKVQVSLKMSS 1748
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 14/143 (9%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D E + +++L I ATD G T++T+ V D NDN+P FS+ +Y+ V +
Sbjct: 1405 LDFEVLPEHTLTIKATD--GSFDTFTNLTIFVSDINDNAPTFSKPLYQTTVSP------A 1456
Query: 129 NVSHWKKFSSIGSVSATDADG-DKVAYKLAVPSNLVV-IVPQTGELLLTGDPPSDDVEYE 186
S + F+ I A D D + Y L S+ + + P++G L + PP+ + Y
Sbjct: 1457 TFSPGQPFAKI---EAHDLDARGALTYSLGQGSSSIFRVAPESGALFMKVLPPAGE-RYL 1512
Query: 187 LTVEAHDLQSPSRYAREPAQVWL 209
+TV A D PS P V +
Sbjct: 1513 VTVTATDNGVPSFSTSVPVSVII 1535
>gi|195378480|ref|XP_002048012.1| GJ13735 [Drosophila virilis]
gi|194155170|gb|EDW70354.1| GJ13735 [Drosophila virilis]
Length = 4641
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 84/179 (46%), Gaps = 23/179 (12%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P Q + YSIT GN F + E +G+L T +DRE +++ L ++
Sbjct: 1183 PLQTITYSITSGNHVGYFDI------------EPHTGLLKTTERKLDRENQSEHILEVSI 1230
Query: 84 TDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
+D I + T V V VLD NDNSPVF Q+VY+ V S+ N N S ++ + ++
Sbjct: 1231 SDNGSPILTSTTRVVVSVLDINDNSPVFDQRVYKVQV---PSTTNMNESIFQ----VHAI 1283
Query: 143 SATDADGDKVAY--KLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSR 199
D + ++ Y K N I +G + T D E+E++V+A D P +
Sbjct: 1284 DNDDGENSRITYSIKSGKKKNKFRIDSFSGHIFFTKTLEPDS-EFEISVKAEDNGIPKK 1341
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 14/94 (14%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+++Y+I +G+ F++ I N T S + L DRE ++ Y+L + A D+
Sbjct: 3371 IIKYNIVKGDSLSQFSIN------ISNGTISLARPL-------DRETISDYALEVQACDL 3417
Query: 87 KGINKAET-HVTVDVLDENDNSPVFSQKVYRFIV 119
+ ++ V V VLD NDN+PVFSQ Y ++
Sbjct: 3418 GIPERCDSVLVNVAVLDANDNAPVFSQANYSVVL 3451
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GN+ + F + T VLL S +D E Y+L I+ TD G
Sbjct: 1400 YNISGGNEGNHFYIGRDT-----------GNVLL--SKFLDYETQTSYNLSISVTD--GS 1444
Query: 90 NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
N A T + + V+D NDN+P F++++Y + + + ++ S I + ATD D
Sbjct: 1445 NAAHTWLFIQVVDTNDNAPQFTKELYHVNISE----------NIEEESVIMQLHATDRDE 1494
Query: 150 D-KVAYKLAV---PSNLVVI 165
D K+ Y+L PS+L +
Sbjct: 1495 DKKLFYQLHATQDPSSLTLF 1514
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 73/179 (40%), Gaps = 17/179 (9%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT------DVKGI 89
N+N + + NPT T SG + T DRE Y + + A D I
Sbjct: 2018 NENVEYRILNPTEMFAIGIT---SGAIKTTGVMFDREVQDMYKIFVEAKSSIFNRDNTSI 2074
Query: 90 NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
+A T V + V D NDN P+F Y +S++ + + ++ A+
Sbjct: 2075 RRAITSVYISVQDINDNCPMFVNMPYY-------ASVSVGFTKGTIIMKVKAIDLDSAEN 2127
Query: 150 DKVAYKLAVPSN-LVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQV 207
+V Y+L + L I +TGEL + + +YELTV A D S P Q+
Sbjct: 2128 GEVRYELKKGNGELFKIDRKTGELSIKQSIEGHNRKYELTVAACDGAVISCCTEVPVQI 2186
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 34/181 (18%)
Query: 28 VRYSITQGNDNHTF-----ALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVIT 82
V+Y I G+ + F + N IR T S V+L +RE+ +Y+L +
Sbjct: 58 VKYRIISGDKDKLFKAEERLVGNFAFLSIRTRT---SNVVL------NREKTEEYNLKVR 108
Query: 83 A--TDVKGIN----KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKF 136
A + +G N + ET + V VLD ND SP+F Y V + K
Sbjct: 109 AHISYARGKNISSYETETAIHVQVLDRNDLSPLFYPTEYAVTVPE----------DTPKH 158
Query: 137 SSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGEL-LLTGDPPSDDVEYELTVEAH 192
SI V A DAD ++ Y + S I P TG++ +L +++ YELTV A+
Sbjct: 159 HSILKVIADDADLGINGEIYYSFLIDSESFAIHPTTGDITILRQLNYAENSHYELTVLAN 218
Query: 193 D 193
D
Sbjct: 219 D 219
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 19/120 (15%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ GT +K L ++ S K Q + Y I G+ F + K+G
Sbjct: 2935 ENALPGTVLKNLLLIDPDSEK---QTMEYYIISGDSQSQFQI-------------GKTGE 2978
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L + S +DRE+ A Y+L I ATD G A ++V V + D NDN P + Y + +
Sbjct: 2979 LFI-SRPLDREQTAFYNLSILATD--GKFTAMSNVQVHIKDVNDNMPYCLKPRYHITINE 3035
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 90/219 (41%), Gaps = 46/219 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y I GN+ F + S +GVL V +G +D E+ Y L + A D
Sbjct: 3267 ISYYIISGNEQRKFNIN------------SSTGVLWV-NGTLDYEKTKFYFLTVQAIDGG 3313
Query: 88 G---INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
N A ++++D D NDN+P F+Q YR +K +N +V I V A
Sbjct: 3314 SPPLSNIAYVNISID--DVNDNTPTFTQNNYR---ASVKEDVNIDV-------PIIDVKA 3361
Query: 145 TDADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDD---VEYELTVEAHDLQSPS 198
TD D + + Y + +L ++ P D +Y L V+A DL P
Sbjct: 3362 TDEDSNLNGIIKYNIVKGDSLSQFSINISNGTISLARPLDRETISDYALEVQACDLGIPE 3421
Query: 199 RY-----------AREPAQVWLQFN-SPVLQDEQLLQMI 225
R A + A V+ Q N S VLQ+ + L +
Sbjct: 3422 RCDSVLVNVAVLDANDNAPVFSQANYSVVLQENRPLGYV 3460
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 57 SKSGVLLVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVY 115
SKS ++ ++DRE ++ Y+L + A D K I + ++ +++LD NDN P FS + Y
Sbjct: 3178 SKSTGIIKLEKNLDRETISIYNLTLIAEDYGKPIMSSVANIVINILDINDNPPEFSLRQY 3237
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSN---LVVIVPQTGEL 172
S ++ NV+ ++ + S +++Y + + N I TG L
Sbjct: 3238 -------SSHVHENVTQGFDVCTVHATSKDIGVNAEISYYI-ISGNEQRKFNINSSTGVL 3289
Query: 173 LLTGDPPSDDVE-YELTVEAHDLQSP 197
+ G + + Y LTV+A D SP
Sbjct: 3290 WVNGTLDYEKTKFYFLTVQAIDGGSP 3315
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 50 EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSP 108
E + T +K+ +V S +DRE+ +Y L I D + AE V + V D NDN+P
Sbjct: 878 EFKEFTINKTTGCIVLSEQLDREQTDKYELHIVVKDCGDPVLSAEAVVYILVDDVNDNAP 937
Query: 109 VFSQKVYRF 117
+F + Y F
Sbjct: 938 IFGVQEYMF 946
>gi|444721941|gb|ELW62648.1| Protocadherin Fat 4 [Tupaia chinensis]
Length = 2618
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 35/193 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+RYSI+ GN++ FA+ S +GVL + +D E ++ ++I+ATD
Sbjct: 796 LIRYSISSGNEDGIFAIN------------SSTGVLTLAKA-LDYELCQKHEMIISATDG 842
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + VT++V+D NDNSPVF Y V + + +++ +++AT
Sbjct: 843 GWVARTGYCSVTINVIDVNDNSPVFLPDEYFPTV----------LENAPSGTTVINLNAT 892
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
DAD +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 893 DADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQG---FLDFETKQSYHLTVKAFNVPDE 949
Query: 198 SRYAREPAQVWLQ 210
R + + L+
Sbjct: 950 ERCSFATINIQLK 962
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 31/176 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN ++F++ N T EIR+ +DRE+V+ Y L + +
Sbjct: 372 PNGQLDYEIIHGNKENSFSI-NHATGEIRSIRP------------LDREKVSHYVLTVRS 418
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D KG T V V ++LDENDN+P FSQ + + ++
Sbjct: 419 SD-KGSPSQSTSVKVIINILDENDNAPRFSQIFSAHVPENFPLGY-----------TVTR 466
Query: 142 VSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ +D D A Y + S I P TG+++++ +D + Y + V AHD
Sbjct: 467 VTTSDEDIGVNAISRYSIMDTSLPFTINPSTGDIIISRPLDREDTDRYRIRVSAHD 522
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 81/177 (45%), Gaps = 35/177 (19%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKV 114
K+G + V SG +DRE+ + SL + A + ++G + E V V VLD ND PVFS +
Sbjct: 1024 KTGQIYV-SGLLDREKEERVSLKVLAKNSGSIRGADIDEVTVNVTVLDAND-PPVFSLSI 1081
Query: 115 YRFIVGD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLV 163
Y + + S+ +S+ V W +FS IGS + A
Sbjct: 1082 YSVQISEGVPVGTHVTFVSAFDSDSVPSWSRFSYFIGSGNENGA---------------F 1126
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
I PQTG++ +T + + + Y LTV A D +PS V L+ N PVL
Sbjct: 1127 SINPQTGQITVTAELDRETLPIYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPVL 1183
Score = 40.8 bits (94), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 19/116 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ +GT V L + + + + ++ YSI GN T NP+T +I
Sbjct: 46 EDAPTGTDV--LLVNASDADASTNAVISYSIMGGNAQFTI---NPSTGQI---------- 90
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVY 115
+TS +DRE Y+LV+ ++D + T V + V D NDN P F Y
Sbjct: 91 --ITSALLDRETKDNYTLVVVSSDAGSPEPLSSSTSVLITVTDVNDNPPRFQHHPY 144
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 97/244 (39%), Gaps = 46/244 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
++ S +DRE+ +Y + ++A D T VT+ V D NDN+P FS+ Y +L
Sbjct: 500 IIISRPLDREDTDRYRIRVSAHDSGW--TVSTDVTIFVTDVNDNAPRFSRPSYYLDCPEL 557
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELL------ 173
+ + S V+ VSATD D +V Y + S I TGE+
Sbjct: 558 -TEIGSKVTQ---------VSATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQVLR 607
Query: 174 ---LTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSE 230
++G + + V + D +PS + + +D
Sbjct: 608 YQNVSGFSNVNINRHSFVVTSSDRGNPSLLSETTVTI---------------NTVDSNDN 652
Query: 231 APHRIEKRR---VTRAVR-PTKRIDFSETDGE---MEGRIVFALEKETEREKFKIRDENP 283
AP + + VT+ V+ TK I + D + + + + L E KFK+ +
Sbjct: 653 APQFSQVKYFTPVTKNVKVGTKLIKVTAIDDKDFGLNSEVEYFLSSEDHLGKFKLDNATG 712
Query: 284 WITV 287
WI+V
Sbjct: 713 WISV 716
>gi|301753549|ref|XP_002912602.1| PREDICTED: protocadherin beta-2-like [Ailuropoda melanoleuca]
Length = 798
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 95/197 (48%), Gaps = 32/197 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+ +DRE AQY++ IT TD+ K + +++V V D NDN+P FSQ Y V +
Sbjct: 404 LVTNTALDRETRAQYNITITVTDLGTPRLKTQHNLSVTVSDVNDNAPAFSQSSYTLRVRE 463
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP--------SNLVVIVPQTG 170
NS H IGSVSATD D +V Y L +P ++LV I G
Sbjct: 464 ----NNSPALH------IGSVSATDRDAGANAQVTYSLLLPPHDPHLPLASLVSINADNG 513
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ----- 220
+L + ++ +E V A D SP+ ++ +V + N+P VL Q
Sbjct: 514 QLFALRALDYEALQAFEFGVRAADRGSPALSSQALVRVLVVDDNDNAPFVLYPLQNGSAP 573
Query: 221 LLQMIDRKSEAPHRIEK 237
+++ R +EA + + K
Sbjct: 574 CTELVPRAAEAGYLVTK 590
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 21/160 (13%)
Query: 45 NPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVL 101
+P +H +S G+L LV +DREE A+ L +TA D + T V ++VL
Sbjct: 175 SPNSHFRLTLQDSPDGILPQLVLDKALDREEQAEIRLTLTALDGGTPPRTGTALVRIEVL 234
Query: 102 DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV 158
D NDN+P F+++ Y V + NS + + +VSA+D D +++Y +
Sbjct: 235 DVNDNAPEFAKRFYEVQVLE-----NSPIGFL-----VATVSASDLDIGTYGEISYVFSQ 284
Query: 159 PSNLV----VIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
S + I ++GEL LT + + Y L ++A D
Sbjct: 285 ASEDIRKTFQINAKSGELFLTQKLDFESTQTYTLNIQATD 324
>gi|291221760|ref|XP_002730888.1| PREDICTED: hedgling-like [Saccoglossus kowalevskii]
Length = 2199
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 69/149 (46%), Gaps = 28/149 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E + + V + ++ + P+ + YSIT G++ F N T + +
Sbjct: 1529 EGNYTACYVAIVTVIATDADVDPNTEITYSITDGHNGEFFIDSNGTIYAV---------- 1578
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVD--VLDENDNSPVFSQKVYRFIV 119
G+IDREE+A Y+L + ATD G + V VD V D NDNSP+F++ Y V
Sbjct: 1579 -----GNIDREEIALYTLTVMATD-NGEEPQSSTVPVDITVTDLNDNSPIFTENNYNGFV 1632
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
N ++ K I VSATDAD
Sbjct: 1633 -------EENAQYYIK---IVKVSATDAD 1651
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 115/271 (42%), Gaps = 25/271 (9%)
Query: 17 VASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQ 76
V + P ++ S+T +DN +++ + NST +VT+ +D E+ A
Sbjct: 1429 VLEEQEPPIYVLTVSVTN-DDNVEYSIASHVNEFEINSTTGD----IVTTTKLDMEQEAM 1483
Query: 77 YSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK 135
YS+ + A D G T V + V + NDNSP+F + Y VG+ ++
Sbjct: 1484 YSISVAACDPDGHYYDGFTVVNILVNNINDNSPIFDRSYYSGEVGEG--------NYTAC 1535
Query: 136 FSSIGSVSATDADGD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEA 191
+ +I +V ATDAD D ++ Y + N + G + G+ +++ Y LTV A
Sbjct: 1536 YVAIVTVIATDADVDPNTEITYSITDGHNGEFFIDSNGTIYAVGNIDREEIALYTLTVMA 1595
Query: 192 HDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVR-PT 247
D + + P + L NSP+ + ++ ++ +I K T A P
Sbjct: 1596 TDNGEEPQSSTVPVDITVTDLNDNSPIFTENNYNGFVEENAQYYIKIVKVSATDADEGPN 1655
Query: 248 KRIDFS---ETDGEMEGRIVFALEKETEREK 275
+ ++ DG+ E + + + T K
Sbjct: 1656 AEVYYTILCGDDGDFEINMYYGIIAPTANAK 1686
Score = 45.1 bits (105), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 17/109 (15%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V Y I QGNDN F + ++ +G++ TSG IDRE A LV++A D
Sbjct: 1872 IVYYEIVQGNDNGFFKI------------DAITGIIR-TSGTIDREVEAVVYLVVSAYD- 1917
Query: 87 KGINKAETHVTVDV--LDENDNSP-VFSQKVYRFIVGDLKSSLNSNVSH 132
G+ + + TVD+ LD NDN P ++ +++ F+ + S+ + ++ H
Sbjct: 1918 DGLPSKQDNATVDITLLDVNDNPPSIYPDEMFTFVYHLMVSANDEHLFH 1966
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 46/91 (50%), Gaps = 17/91 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ ++I G D H EI +T GVL VT +DRE A Y+ I+A+D
Sbjct: 1146 ISFAIHTGADGH---------FEINRTT----GVLSVTHT-LDRETKATYTFNISASD-H 1190
Query: 88 G--INKAETHVTVDVLDENDNSPVFSQKVYR 116
G I T V +D+LD NDN P F+Q YR
Sbjct: 1191 GVPILTNFTEVIIDLLDINDNRPTFTQSAYR 1221
>gi|291244990|ref|XP_002742376.1| PREDICTED: hedgling-like, partial [Saccoglossus kowalevskii]
Length = 3129
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 127/294 (43%), Gaps = 55/294 (18%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G L I+ + + + Y IT GND TFAL S SGVL V
Sbjct: 2802 GTSVLTIIATDDDANENGQLTYDITSGNDG-TFALA------------STSGVLSVVM-P 2847
Query: 69 IDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+DRE A YSL +T TD G+ A+T T+ + D NDN P F+Q V + V +
Sbjct: 2848 LDRETTASYSLEVTVTD-NGLVPLFAQTTFTITIADINDNVPQFAQSVLKLYVAE----- 2901
Query: 127 NSNVSHWKKFSSIGSVSATDAD-GDK--VAYKLA--VPSNLVVIVPQTGELLLTGDPPSD 181
N +S + ++ ATD D GD V Y ++ V ++ ++ +TG L+ D +
Sbjct: 2902 NVPLSTL-----VDTLLATDPDLGDNGLVNYTISSGVNADHFILDIETGVLITAADIDRE 2956
Query: 182 DV-EYELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQLLQMIDRKSEAPHRIEK 237
+ Y T +A D SP+ + ++ ++ N P+ +++ I H +
Sbjct: 2957 LIGSYLFTCKAVDNGSPTLFTSVTVEIIVEDENDNYPIFNEDEYSVTIAED----HDVNA 3012
Query: 238 RRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENG 291
+T +D ++ D + ++ F + DE + ++D+NG
Sbjct: 3013 YILT--------VDATDADNGTNAELTYSF-----HSSFPVGDE--YFSIDDNG 3051
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 22/145 (15%)
Query: 14 PILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREE 73
P+ ++S+ + +Y+IT GND+ F+L + T LV G D E
Sbjct: 2278 PVFQSTSYNI--SISKYTITSGNDDDNFSLDDSTGE-------------LVVIGSFDFET 2322
Query: 74 VAQYSLVITATDVKGI--NKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKS---SL 126
V Y+LV+TATD ++ T V V+++ DENDN+P + Y + + +S ++
Sbjct: 2323 VPSYTLVVTATDSTAALGDQLSTDVDVEIIIEDENDNTPTCDPQPYVVSISENESTGTTV 2382
Query: 127 NSNVSHWKKFSSIGSVSATDADGDK 151
+ V + G V+ T A GD+
Sbjct: 2383 TTLVIQDSDSGTNGEVAITKASGDE 2407
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+E+++ GT ++ + S H V Y+IT GN FA+ +S +G
Sbjct: 1873 LEDAEPGTTIETCIAIDPDSDDTLHGQVSYAITNGNTAEHFAI------------DSSTG 1920
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
V+ T +DRE + Y+L ITATD G ET + + V D ND P +Q Y
Sbjct: 1921 VVQ-TIDLLDRETIDSYTLEITATDGNGGTGVET-LDITVTDVNDVEPSCTQYSYAL 1975
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 79/192 (41%), Gaps = 56/192 (29%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y+IT+GN F + + SG +L T +DRE QY L ITATD
Sbjct: 2502 VTYNITEGNSEEKFTV------------DLYSGDVL-TKSLLDREITDQYILEITATDGG 2548
Query: 88 GINKAET-HVTVDVLDENDNSPVFSQKVY---------------RFIVGDLKSSLNSNVS 131
T +++ V D NDN+P+FSQ +Y I D+ S NSN+
Sbjct: 2549 DTPLTGTVTLSITVEDVNDNTPIFSQDIYTTSILENINIGTSVFTVIATDIDSGANSNI- 2607
Query: 132 HWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE----YEL 187
+++ G +S D + D TGE+ D D E Y L
Sbjct: 2608 ---EYNITGGMSHEDFNIDI----------------ATGEITTAADI---DFETRKMYSL 2645
Query: 188 TVEAHDLQSPSR 199
TV+A D +P R
Sbjct: 2646 TVQATDGGTPVR 2657
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 13/93 (13%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITA 83
H +V Y IT +PT+ + S + +SG + L S +D EE Y + + A
Sbjct: 1730 HGIVAYKITS---------VSPTSGTSKFSIDERSGEIFLFES--LDYEEETSYDIAVEA 1778
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYR 116
D G+ A +T++V+D NDNSP Q Y
Sbjct: 1779 EDGGGLTDAAI-ITINVIDLNDNSPSCLQTSYS 1810
>gi|224067665|ref|XP_002195148.1| PREDICTED: protocadherin Fat 2 [Taeniopygia guttata]
Length = 4428
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 90/194 (46%), Gaps = 33/194 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I GN + F++ +SG L+ T ++D E+V+ Y L + T++
Sbjct: 1693 VSYEIKDGNGDGVFSMN------------YQSG-LISTQKNLDFEQVSFYQLKVRGTNMA 1739
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G + V + V+DENDN PVF + + VG + + + + ++ ATDA
Sbjct: 1740 GA-FMDAVVLIYVIDENDNVPVFVKPSF---VGWIMENAPAQSMVLDESNAPLVTYATDA 1795
Query: 148 DGDKVA---YKLAVPSNL--VVIVPQTGELLLTGDPPSDDVEYELT------VEAHDLQS 196
D D A Y++ P L + P TG L D ++YELT V HD S
Sbjct: 1796 DQDSNALLIYEILEPEALKYFTVDPSTGTLTSRAD-----IDYELTPVFHFSVHVHDSGS 1850
Query: 197 PSRYAREPAQVWLQ 210
PS +A +PA+V +
Sbjct: 1851 PSLFASKPAKVTIH 1864
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 34/172 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I+ GND+ F + + + G+L V S +D E+ + Y L IT D+
Sbjct: 754 YVISDGNDDSCFTI------------DLERGLLQVLS-PLDHEQTSFYILNITVYDLGTP 800
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K+ + V+VLD NDN+P F+Q Y + + H ++I + A DAD
Sbjct: 801 QKSSWKLLAVNVLDTNDNTPKFTQASYWVAIPE----------HVAAGTTIAQLKAEDAD 850
Query: 149 GD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHD 193
D +V Y L P++ I TGE+ +TG + D E Y L +EA D
Sbjct: 851 TDDNGRVKYSLLTPTDKFAINSVTGEVTVTG---ALDRELWPCYVLKIEARD 899
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 22/155 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+RY I G+ + F + + +R T S + LL +RE Y L+I AT
Sbjct: 72 IRYRIASGDSSGLFKTEEHVIGDFCFLRIRTRSSNTALL------NREVKDSYMLIIKAT 125
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+ +A V + +LD ND P+FS Y+ + + + L + +S ++SA
Sbjct: 126 ESTLAYEAWAKVLIHILDRNDLKPLFSPPSYKVSIRE-DTPLKTVIS---------TLSA 175
Query: 145 TDADGDKVA---YKLAVPSNLVVIVPQTGELLLTG 176
TDAD + A Y L+ SNL + P TG +++TG
Sbjct: 176 TDADAGQNAEFYYALSTKSNLFTVHPTTGAVMVTG 210
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
+T+ K+GVL VT G +D E +++ + ATD + +E V V+V D NDN P+FSQ
Sbjct: 2220 NTDFKTGVLTVT-GQLDYELETKHTFTVRATDTALGSFSEARVEVEVEDINDNPPIFSQI 2278
Query: 114 VY 115
+Y
Sbjct: 2279 IY 2280
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 97/217 (44%), Gaps = 40/217 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E+ GT V L +L + ++ ++Y I GND+ F L NP T G
Sbjct: 3232 EDVAVGTEVLNLSVLTRDNAEN--NEIKYEIVNGNDHGKFQL-NPNT-----------GA 3277
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVG 120
L + +G +D E +Y L I T + ++ T V +++ D ND++P F Q Y
Sbjct: 3278 LYI-NGSLDFEVSHEYYLSIEGTRKGSASLSDVTMVVINITDINDHAPEFIQDPY----- 3331
Query: 121 DLKSSLNSNVSHWKKFSSIG----SVSATDADG---DKVAYKL--AVPSNLVVIVPQTGE 171
+ ++ ++IG +VSA D DG +++ Y + P I P+ G+
Sbjct: 3332 ---------FTDIREDAAIGEIILTVSADDLDGSMNNQITYSIVEGNPLGHFAIQPKNGQ 3382
Query: 172 LLLTGDPPSDDV-EYELTVEAHDLQSPSRYAREPAQV 207
+ + +++ Y LTV A D P++++ P V
Sbjct: 3383 ISIAKHLDREEIPSYALTVRATDNGHPAQFSDVPVHV 3419
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 71/167 (42%), Gaps = 19/167 (11%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH 95
N T++L P E R + L TS +DRE+ Y LV ATD G +
Sbjct: 3046 NAQITYSLHGPGAEEFRLGPHTGE---LSTSASLDREQKPTYHLVAKATDGGG-RSCQAD 3101
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKV 152
VT+ + D NDN+P RF ++ N + + I V+A D D +V
Sbjct: 3102 VTLIIEDTNDNAP-------RFFPSHCAVAVFDNTT---TKTPIAVVAARDLDEGLNAEV 3151
Query: 153 AYKLAVPSNLVVIVPQTGELLLTGDPPSDD--VEYELTVEAHDLQSP 197
Y L+ +N + +T ++ P D +ELTV A D +P
Sbjct: 3152 VYSLSDSANGHFSIEETTGVIRLEKPLKDSQHSAFELTVCATDRGTP 3198
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 51/108 (47%), Gaps = 16/108 (14%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE+ +Y L + A+D G +A T V + VLD NDNSP Q +Y G +
Sbjct: 2975 LDREDTEKYLLKVVASD--GKFQATTEVEIFVLDINDNSPECGQILY---TGRVSEDAGP 3029
Query: 129 NVSHWKKFSSIGSVSATDAD---GDKVAYKLAVP-SNLVVIVPQTGEL 172
+ K +SATD D ++ Y L P + + P TGEL
Sbjct: 3030 GLLILK-------ISATDPDVGSNAQITYSLHGPGAEEFRLGPHTGEL 3070
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI +GN FA+ + K+G + + + +DREE+ Y+L + ATD
Sbjct: 3361 ITYSIVEGNPLGHFAI------------QPKNGQISI-AKHLDREEIPSYALTVRATDNG 3407
Query: 88 GINK-AETHVTVDVLDENDNSPVFSQKVYRFIV 119
+ ++ V V V D NDN P F Q Y +V
Sbjct: 3408 HPAQFSDVPVHVHVSDVNDNPPRFFQLNYSVVV 3440
>gi|125835070|ref|XP_693952.2| PREDICTED: protocadherin Fat 1-like [Danio rerio]
Length = 4472
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 94/201 (46%), Gaps = 28/201 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGN-DN----HTFALKNPTTHEIRNSTE 56
ENS + T V+G PI + + + Y+I G+ DN T+ L N IR
Sbjct: 42 ENSAAKTYVEG-PIKMGIFMTNQSVDIWYTIESGDHDNLFKAETYVLGNFCFLRIR---- 96
Query: 57 SKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYR 116
+K G+ S ++RE Y L I A + +A+T V V +LD ND P+FS Y
Sbjct: 97 TKGGI----SASLNREIKDHYLLTINAIERHTGAEAQTQVKVQILDMNDLRPLFSPTTYS 152
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVP--SNLVVIVPQTGELL 173
F V + ++ +SIG VSATDAD G Y + +++ I P +G +
Sbjct: 153 FFVPENSAAR----------TSIGRVSATDADTGTNGEYYFSFKEWTDMFSIHPTSGVIT 202
Query: 174 LTGDPPSDDVE-YELTVEAHD 193
LTG ++ YE+ V A D
Sbjct: 203 LTGKLDYSEMALYEIDVLAVD 223
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 89/197 (45%), Gaps = 32/197 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G K L + AS + + YS + GN+ F + +S++G + V
Sbjct: 3237 GTKLLKVFAASKDRQMTSQITYSFSSGNEQGAFRI------------DSQTGDIFVME-P 3283
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDV--LDENDNSPVFSQKVYRFIVGDLKSSL 126
+D EE +Q+ L + AT V G TV + D NDNSPVFSQK+Y +V +
Sbjct: 3284 LDYEESSQHYLTVKAT-VGGKQSLSDMATVSIHLQDINDNSPVFSQKIYSAVVSE----- 3337
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
+ S++ +V A D DG +++ Y + + S ++ +GEL L +
Sbjct: 3338 -----DTRLASTVLTVLANDLDGPLNNQIRYSIEESNQSCPFIMDAVSGELQLARQLDRE 3392
Query: 182 DV-EYELTVEAHDLQSP 197
V Y LTV A D SP
Sbjct: 3393 MVASYMLTVMASDSGSP 3409
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 92/194 (47%), Gaps = 33/194 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I +GN+ F + NP + + +T +D E ++ Y L++ TD+
Sbjct: 1691 VFYQIIEGNEKGAFDI-NPNSGAV------------ITRKKLDFETLSSYKLIVQGTDMA 1737
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
++ + T V + + DENDN+PVF+Q Y + + + + S V + +K + V ATDA
Sbjct: 1738 EMSSSVT-VNIYLKDENDNAPVFTQSEYTGFISE-SAIIRSVVLNSQKAPLV--VRATDA 1793
Query: 148 D---GDKVAYKLAVP--SNLVVIVPQTGELLLTGDPPSDDVEYE------LTVEAHDLQS 196
D ++ Y++ P N I +TG + +++YE V+ HD +
Sbjct: 1794 DQHSNARLVYQIMEPFACNYFSIDSRTGAIQTLS-----NLDYEQRRIFNFRVQVHDTGN 1848
Query: 197 PSRYAREPAQVWLQ 210
P +A++ A V +
Sbjct: 1849 PRLFAQDTANVTIH 1862
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 13/90 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y I+ GN FA+ + ++G++ TS +DRE+ A++ L IT +D
Sbjct: 1173 LSYKISSGNPQGFFAI------------DFQTGLVTTTSRKLDREKQAEHLLEITVSDDG 1220
Query: 88 GINKAET-HVTVDVLDENDNSPVFSQKVYR 116
+K+ HV V+VLDENDNSP F +K+++
Sbjct: 1221 SPSKSTVVHVIVNVLDENDNSPQFLEKIFK 1250
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 110/246 (44%), Gaps = 41/246 (16%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
++ S +DREE Y L ITATD + KA +TV LD NDNSPV + VY
Sbjct: 2968 VVAVSKTLDREERDFYLLNITATDGTFVAKAAVEITV--LDANDNSPVCEKDVY------ 3019
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA-VPSNLVVIVPQTGEL--LLT 175
++ +V K I VSATDAD ++ Y+L+ + I +TG + L T
Sbjct: 3020 -AQAVPEDVLIGKH---ILQVSATDADIQSNAEITYQLSGSGAESFTIDSKTGAVKTLAT 3075
Query: 176 GDPPSDDVEYELTVEA-----HDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSE 230
D DV Y LTV A H Q+ E A N+P + +
Sbjct: 3076 LDREVTDV-YNLTVRAVDKDNHFCQASLLITVEDAND----NAP------------KFTS 3118
Query: 231 APHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDEN 290
PH + + T+ R++ + D M G+I ++ E ++ F I + + I+++ +
Sbjct: 3119 DPHHVSIYQNTQPGTYVARLEAFDADIGMNGKIRYSFE-DSAGGLFSIEESSGIISLERS 3177
Query: 291 GDVRVK 296
D ++K
Sbjct: 3178 LDKQMK 3183
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 128/284 (45%), Gaps = 60/284 (21%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKV 114
++++GV+ T+G +D E +Q+ L++ A D I +E VTV + D NDN P+F+Q++
Sbjct: 2329 DAETGVIW-TAGLLDHETQSQHDLIVKAVDGGAIQLSSEVQVTVYITDLNDNPPIFAQQL 2387
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIG----SVSATDADGDKVA-YKLAVPS----NLVVI 165
Y N+ +S K SS G V A DAD + + A+ S N+ I
Sbjct: 2388 Y-----------NATIS---KISSPGQLVTCVKAFDADSHGSSNLEYAILSGNDNNIFAI 2433
Query: 166 VPQTGELLLTG-DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL-QDEQ 220
+GE+++ S Y L + D A A +++ +SP QDE
Sbjct: 2434 DALSGEIVIANISRQSLKHFYSLILSVTD---GVFCASAEANIYVMGENSHSPSFTQDEY 2490
Query: 221 LLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRD 280
L+++ E V V + ID E G+ G++ F + + R+KF I
Sbjct: 2491 LIEL----------AENSPVGTLVGQVEAID--EDPGKY-GQLTFFIMNDIARDKFNI-- 2535
Query: 281 ENPWITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
+E+G + ++ +D E PE+ I + I+ A +GG
Sbjct: 2536 -------NEDGQIYTEESFDREN--PEEKI---IRISLMAKDGG 2567
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 43 LKNPTTHEIRNSTESKSGVLLVTSGDI------DREEVAQYSLVITATDVKGINKAETH- 95
L N + I S +S ++ SG++ DRE VA Y L + A+D K+++
Sbjct: 3357 LNNQIRYSIEESNQSCPFIMDAVSGELQLARQLDREMVASYMLTVMASDSGSPLKSDSAA 3416
Query: 96 VTVDVLDENDNSPVFSQKVYRFIV 119
+ + V D NDN PVFSQ Y I+
Sbjct: 3417 INIAVSDVNDNPPVFSQANYSLII 3440
Score = 43.9 bits (102), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 67/148 (45%), Gaps = 20/148 (13%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+ TSG I E+V+QY + +D +A T V V V D N+N+PVF + Y + +
Sbjct: 418 LISTSGPIKAEKVSQYEFEVVISD----RRASTKVVVSVSDMNNNAPVFQKSNYEASIAE 473
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNL----VVIVPQTGELLLTGD 177
H +S+ +VSATD D + Y N+ V+ TG + T D
Sbjct: 474 ----------HVPIGTSVLTVSATDMDDGENGYVTYSIVNVNKQPFVVDYFTGVISTTED 523
Query: 178 PPSDDV--EYELTVEAHDLQSPSRYARE 203
+ + ++ L + A D SP R E
Sbjct: 524 LDYETMPSKFSLRIRASDWGSPFRREAE 551
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 19/130 (14%)
Query: 52 RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS 111
R E SG +++ +G +D E + Y+L + ATD G T V + VLD N++ P FS
Sbjct: 1395 RFDVEKASGTIII-AGALDAERQSNYNLTVEATD--GTRSISTQVIIQVLDTNEHRPKFS 1451
Query: 112 QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIV---- 166
Q Y S+ + K I ++ATD D +K++Y L ++L +
Sbjct: 1452 QNHYEI-------SIPEEIQPGMK---ILEINATDKDENNKLSYTLLSSTDLFSLKKFRL 1501
Query: 167 -PQTGELLLT 175
P TG L T
Sbjct: 1502 DPGTGFLYTT 1511
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 19/113 (16%)
Query: 4 SKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLL 63
S G V + A SH + + Y+I GNDN+ FA+ ++ SG ++
Sbjct: 2396 SSPGQLVTCVKAFDADSHGSSN--LEYAILSGNDNNIFAI------------DALSGEIV 2441
Query: 64 VTSGDIDREEVAQ-YSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
+ +I R+ + YSL+++ TD G+ A + V+ EN +SP F+Q Y
Sbjct: 2442 I--ANISRQSLKHFYSLILSVTD--GVFCASAEANIYVMGENSHSPSFTQDEY 2490
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVT-VDVLDENDNSPVFSQ 112
+ ES +G L V +DRE +Y+L IT D+ K+ +H+ V +LD NDNSP F Q
Sbjct: 765 TIESDTGWLKVFQ-PLDRETTDRYTLKITVYDLGLPQKSSSHLLDVKILDANDNSPEFLQ 823
Query: 113 KVY 115
+ Y
Sbjct: 824 RKY 826
>gi|449278207|gb|EMC86141.1| Protocadherin Fat 4, partial [Columba livia]
Length = 4990
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 83/183 (45%), Gaps = 36/183 (19%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+ YS+ +GN+ FA+ + T V LV G +D E A Y LVI A D
Sbjct: 1250 LIHYSVIKGNEEKRFAIDSSTGQ-----------VTLV--GKLDHEATASYLLVIQAVDS 1296
Query: 87 KGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
++ + T +++DVLDENDNSP F + V + + + + SV+AT
Sbjct: 1297 GAVSLSSTCMLSIDVLDENDNSPSFPKTTLLVDV----------LENMRVGELVSSVTAT 1346
Query: 146 DAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQS 196
D+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1347 DSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQGR 1403
Query: 197 PSR 199
P R
Sbjct: 1404 PPR 1406
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 29/190 (15%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+RY+I+ GN+ FA+ N TT L + +D E ++ LV+TATD
Sbjct: 3131 LIRYNISSGNEAGIFAI-NTTTGT------------LTLAKPLDFELCQKHELVVTATDG 3177
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+++ VTV+V+D NDNSP F+ + Y + + + +++ ++AT
Sbjct: 3178 GWVSRTGYCRVTVNVIDVNDNSPAFNPEDY----------FPNVLENAPSGTTVIRLNAT 3227
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRY 200
DAD +AY + + S+L VI P TG + G + + Y L V+A ++ R
Sbjct: 3228 DADSGPNAVIAYAIQSSDSDLFVIDPNTGTITTQGFLDYETKQSYHLMVKAFNIPDEERC 3287
Query: 201 AREPAQVWLQ 210
+ + L+
Sbjct: 3288 SFASVNIQLE 3297
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+G++DRE V+ Y+L + ATD KG + T V V VLD NDN+P+F+QK+Y+ VG+
Sbjct: 2115 TGELDREAVSNYTLTVVATD-KGQPSLSSSTDVVVIVLDINDNNPLFAQKLYKVEVGE 2171
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 51/97 (52%), Gaps = 15/97 (15%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ V+YSI+ G+ + R ++GV+ T +DREE Y L I A
Sbjct: 726 PNGTVKYSISAGDTS-------------RFQVHGQTGVI-TTKIALDREEKTAYQLQIMA 771
Query: 84 TDVKGI-NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
TD + ++ + VT+ VLD DN PVFSQ +Y F+V
Sbjct: 772 TDGGHLHSQNQAIVTITVLDTQDNPPVFSQGMYSFVV 808
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 16/87 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y I +GN ++F++ N T EIR+ +DRE+++QY+L I A+D K
Sbjct: 2711 LNYEIIEGNMENSFSI-NRATGEIRSVRP------------LDREKLSQYTLTIKASD-K 2756
Query: 88 G--INKAETHVTVDVLDENDNSPVFSQ 112
G + V +++LDENDN+P FSQ
Sbjct: 2757 GTPLQSTTVKVIINILDENDNAPRFSQ 2783
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 70/174 (40%), Gaps = 29/174 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ T + T+ IDREE A Y L + A+
Sbjct: 832 ISYLITTGDQRGMFAINRVTGQ-------------ITTASIIDREEQAFYQLKVVAS--G 876
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G + V + V D NDNSP F V S+N V +WK +I A D
Sbjct: 877 GAITGDAMVNITVKDLNDNSPHFIHAV---------ESVNV-VENWKAGHTIFQAKAVDP 926
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSP 197
D V Y L P L I QTG + L G + Y++ + A D+ P
Sbjct: 927 DEGVNGMVLYSLKQNPKGLFSINEQTGAISLIGPLDINAGSYQVEILASDMGVP 980
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K L + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1760 GDGSKILQLTAMDADEGANALVTYTIISGADD-SFHI------------DPESGDLIATK 1806
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND+ P FS+ VY F
Sbjct: 1807 -RLDRERRSKYSLLVRADD--GLQSSDMRINITVSDVNDHIPKFSRPVYSF 1854
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 44/93 (47%), Gaps = 16/93 (17%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSG----VLLVTSGDIDREEVAQYSLVITATD 85
Y I GN+ F L N T + SG + LV+ G +DRE Y L++ D
Sbjct: 132 YRIVAGNEEGCFRL---------NITLNPSGEGAFLHLVSRGGLDREATPTYQLLVQVED 182
Query: 86 VKG--INKAETHVTVDVLDENDNSPVFSQKVYR 116
KG + V V V D NDN P+FSQ +Y+
Sbjct: 183 -KGEPRRRGYLQVNVTVQDINDNPPIFSQTLYQ 214
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 87/205 (42%), Gaps = 48/205 (23%)
Query: 2 ENSKSGTGVKGLPILVASSHKHP--HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKS 59
E++ +GT + +LV SS + ++ Y +T G+ T NP+T +I
Sbjct: 2381 EDAPTGTDI----LLVNSSDADASTNAVISYKLTGGDSQFTI---NPSTGQI-------- 2425
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGINKA---ETHVTVDVLDENDNSPVFSQKVYR 116
+TS +DRE Y+LV+ A+D G +A T V V V D NDN P F Y
Sbjct: 2426 ----ITSALLDRESRENYTLVVVASD-GGFPRALSSSTSVLVAVADVNDNPPKFQHHPY- 2479
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGS----VSATDADGDKVA---YKL-AVPSNLVVIVPQ 168
V+H ++ GS V+ TDAD A Y L S I P
Sbjct: 2480 -------------VTHVPSPTTSGSFVFAVTVTDADAGSNAELHYSLMGKNSEKFHIDPA 2526
Query: 169 TGELLLTGDPPSDDVEYELTVEAHD 193
G +L +P + + E ++V D
Sbjct: 2527 RGA-ILAANPLAGESEVTISVHVRD 2550
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVF 110
L T +DREE A +SL + ATD+ T V V +LD NDNSPVF
Sbjct: 647 LSTISQLDREEQAHFSLQVLATDLGSPPLFSITRVNVSLLDVNDNSPVF 695
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 27/123 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
+ YSI +GN F + G L + S ++DRE +Y L++ A+D
Sbjct: 1037 IAYSIIEGNTGDAFGIF-------------PDGQLYIKS-ELDRELQERYILLVVASDRA 1082
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
V+ +N A +VTV + D NDN P+F+ Y F + + SS+G ++A
Sbjct: 1083 VEPLN-ATVNVTVILEDVNDNRPLFNSTNYVFYFEE----------EQRGGSSVGKINAV 1131
Query: 146 DAD 148
D D
Sbjct: 1132 DKD 1134
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 73/176 (41%), Gaps = 31/176 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL-LVTSGDIDREEVAQYSLVITATDV 86
+ Y + GN+ F L S SG L LV S +DRE QY L+ITA D
Sbjct: 2301 LTYVLVGGNEEGAFTL-------------SASGELRLVQS--LDREMKEQYILLITAADS 2345
Query: 87 KGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
T + V V D NDN P F+ +Y V + + I V+++
Sbjct: 2346 GSPALTGTGTIAVTVDDVNDNVPTFAFNMYSATVPE----------DAPTGTDILLVNSS 2395
Query: 146 DADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSP 197
DAD ++YKL + I P TG+++ + + E Y L V A D P
Sbjct: 2396 DADASTNAVISYKLTGGDSQFTINPSTGQIITSALLDRESRENYTLVVVASDGGFP 2451
>gi|426229732|ref|XP_004008940.1| PREDICTED: protocadherin beta-15 [Ovis aries]
Length = 767
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 113/257 (43%), Gaps = 53/257 (20%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G +DRE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTNGALDRESKAEYNVTITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLWVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYK-------LAVPSNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L ++LV I P G
Sbjct: 463 ----NNSPALH------IGSVSATDTDAGANAQVTYSLLPPPDPLLPLASLVSINPDNGH 512
Query: 172 LL-LTGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQ 223
L LT S D E +E V A D SP+ ++ +V + N+P + L
Sbjct: 513 LFALT----SLDYEALRAFEFRVGATDRGSPALSSQALVRVLVADANDNAPFV----LYP 564
Query: 224 MIDRKSEAPHRIEKRRVTRAVRP---TKRIDFSETDGEMEGRIVFALEKETEREKFKIRD 280
+ + + P + V RA P ++ + D + + L K TE F +
Sbjct: 565 LQNASAPCP-----QLVPRAAEPGYLVTKVVAVDGDAGQNAWLSYQLLKATEPGLFGV-- 617
Query: 281 ENPWITVDENGDVRVKK 297
W NG+VR +
Sbjct: 618 ---WA---HNGEVRTAR 628
>gi|126345242|ref|XP_001370051.1| PREDICTED: protocadherin beta-2-like [Monodelphis domestica]
Length = 796
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 75/160 (46%), Gaps = 22/160 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT D+ K E ++T+ + D NDN PVF+ Y+ + +
Sbjct: 403 LVTEGALDRERRAEYNITITVMDLGSPRLKTEHNITIWISDINDNPPVFTLTAYKLYLQE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H IGSVSA D D KV Y L P N + I G
Sbjct: 463 ----NNSPALH------IGSVSARDRDSGINAKVTYSLLPPENGDLPLFSYISINSDNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ 210
L + ++ ++ TV A D SPS ++ QV +Q
Sbjct: 513 LYALRSLDYEAIQAFQFTVTATDGGSPSLSSQALVQVVVQ 552
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 24 PHQLVRYSITQGNDNHTFALKN----PTTH---EIRNSTESKSGVLLVTSGDIDREEVAQ 76
P +++R Q D +L+N P H +IR +E + LV + +DREE+ +
Sbjct: 148 PGKIIRLDGAQDLDVGINSLQNYTVSPNPHFQVQIRARSEGRKYPELVLNKALDREELPE 207
Query: 77 YSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVY 115
L +TA D ++ T + V ++D NDN+P F ++ Y
Sbjct: 208 IRLTLTALDGGSPPRSGTAQIRVLIVDVNDNAPEFGRQNY 247
>gi|332234743|ref|XP_003266563.1| PREDICTED: protocadherin beta-15 [Nomascus leucogenys]
Length = 787
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 54/103 (52%), Gaps = 14/103 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ K E +TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTEGALDRETRAEYNITITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN 161
NS H IGSVSATD D ++ Y L P +
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQITYSLLPPQD 495
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 16/92 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYR----- 116
LV ++DREE A+ L +TA D ++ T + + VLD NDN+P F Q Y
Sbjct: 194 LVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDVNDNAPEFVQAFYEVQVPE 253
Query: 117 -----FIV-----GDLKSSLNSNVSHWKKFSS 138
F+V DL + N +S+ +SS
Sbjct: 254 NSPIGFLVVKVSARDLDTGTNGEISYSLYYSS 285
>gi|354500152|ref|XP_003512166.1| PREDICTED: protocadherin-3-like [Cricetulus griseus]
Length = 773
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 109/251 (43%), Gaps = 41/251 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ H +TV V D NDN+P F+Q Y V +
Sbjct: 402 LVTEGPLDRESRAEYNITITVTDLGTPRLTAQHTITVQVSDVNDNAPAFTQTSYTLFVQE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDKVAY-----------KLAVPSNLVVIVPQTG 170
NS H IG++SATD+D A+ +LA+ S+L+ I G
Sbjct: 462 ----NNSPALH------IGTISATDSDSGSNAHITYSLLPTHDPQLAL-SSLISINADNG 510
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQMID 226
+L + ++ +E V A D SP+ ++ +V + N+P +L +
Sbjct: 511 QLFALRALDYEALQNFEFRVGATDQGSPALSSQALVRVLVLDANDNAPF-----VLYPLQ 565
Query: 227 RKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWIT 286
SE + R TK + ++D + F L K TE F + W
Sbjct: 566 NASEPCTELLPRVAEPGYLVTKVVAV-DSDSGQNAWLSFQLLKATEPGLFTV-----WA- 618
Query: 287 VDENGDVRVKK 297
NG+VR +
Sbjct: 619 --HNGEVRTSR 627
>gi|195160152|ref|XP_002020940.1| GL16483 [Drosophila persimilis]
gi|194117890|gb|EDW39933.1| GL16483 [Drosophila persimilis]
Length = 5086
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 102/244 (41%), Gaps = 46/244 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+ +G +DRE+ +Y L + A+D G +AET +T+ + D+NDN+P F Y F +L
Sbjct: 2875 ITVAGHLDREQEDEYILKVVASD--GAWRAETPITITIQDQNDNAPEFEHSFYSFSFPEL 2932
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELLLTGDP 178
+ +G + ATD D ++Y L PS + I P TGE+
Sbjct: 2933 ----------LHPVALVGQIIATDRDKLGPNSVISYSLQQPSPMFSIDPATGEIF----- 2977
Query: 179 PSDDVEYELTVEAHDLQSPSRYAREPAQVWL------QFNSPVLQDEQL--LQMIDRKSE 230
++Y+ S+Y R P ++ P L E L + ++D K+
Sbjct: 2978 SKKAIQYKR----------SQYVRSPENMYALTILATDNGKPPLYSECLVNINIVDAKNN 3027
Query: 231 APHRIEKRRVT---RAVRPTKRI-DFSETDGEMEG---RIVFALEKETEREKFKIRDENP 283
P + ++ RP +RI TD + G + +AL F I +
Sbjct: 3028 PPKFEQAAYLSPLPEHARPGQRIVQVHATDKQDMGAANEMDYALVYGNLSAFFAIGKHDG 3087
Query: 284 WITV 287
WI++
Sbjct: 3088 WISL 3091
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 18/142 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
LV + +DRE ++Y + I +D G+ ET++ ++V D NDN P+F + VY F + +
Sbjct: 1779 LVLNDTLDRETKSKYDVRIRVSD--GVQYTETYIAIEVSDTNDNPPMFEESVYSFDIPE- 1835
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV--PSNLVVIVPQTGELLLTGD 177
+ + +G V A DAD +++Y + +++ + PQTG L LT
Sbjct: 1836 ---------NAPRGYQVGQVVARDADLGQNSQLSYGVVSDWANDVFSLNPQTGMLTLTAR 1886
Query: 178 PPSDDVE-YELTVEAHDLQSPS 198
++V+ Y L V+A D PS
Sbjct: 1887 LDYEEVQHYILIVQAQDSGQPS 1908
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 26/149 (17%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFAL-KNPTTHEIRNSTESKSG 60
EN+ +GT V + ++ + + R I GN+ F L K P H +R
Sbjct: 342 ENAVNGTVVAAVSVIDSDDGLNGETTTR--IVSGNELGHFRLEKTPLFHIVR-------- 391
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIV 119
+G +DREE+ +Y+L + A D + T H+ +DV D ND+ PVF + Y ++
Sbjct: 392 ----VNGVLDREEIGKYNLTVVAMDRGTPARITTAHLIIDVNDVNDHEPVFEKSEYSAVL 447
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+L + S + S++ATD D
Sbjct: 448 SELAPT----------GSYVASITATDED 466
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 62/135 (45%), Gaps = 29/135 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I GN+ F++ T L+ T+G +DRE L I+A D
Sbjct: 473 VHYEILSGNELKWFSIDAATG-------------LIATAGALDREIKDSVELSISARD-G 518
Query: 88 GINK--AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G N A T + V VLDEND +P F Q+ L SL+ +V+ S + +++AT
Sbjct: 519 GPNPKFAYTQLKVTVLDENDEAPQFGQQ-------QLNVSLSEDVAPQ---SLVCTLTAT 568
Query: 146 DAD---GDKVAYKLA 157
D D VA+ LA
Sbjct: 569 DHDQGTNGSVAFSLA 583
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 16/102 (15%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ ++RY+I+ GN+N F + + ++G +L+ +D + V +Y L IT
Sbjct: 3169 PNGMLRYAISGGNENRDFMV------------DERTGGILIRQ-QLDYDLVQEYHLNITV 3215
Query: 84 TDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLK 123
D+ G A +T+ + D NDN P+F+Q Y V + K
Sbjct: 3216 QDL-GFQPLSAVALLTIILTDVNDNPPLFNQSEYHGYVAENK 3256
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 60/133 (45%), Gaps = 30/133 (22%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
YSI GN F + + +SG + T+ +DRE++A YSLVI A D G+
Sbjct: 3492 YSIINGNLKQGFKI------------DVQSGEI-STAARLDREDIAHYSLVIGAIDT-GL 3537
Query: 90 --NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
V +D+ D NDN PVF+ + V + + +SI ++SATD
Sbjct: 3538 PPQTGSATVRIDLDDVNDNGPVFAPEGLLGYVSE----------NEPAGTSIMTLSATDP 3587
Query: 148 D----GDKVAYKL 156
D G Y+L
Sbjct: 3588 DLPRNGGPFTYQL 3600
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 11/81 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE + Y L ITA D +A T + V +LDENDNSPVF K Y V + N
Sbjct: 2143 LDRELRSSYVLNITARDRGEPPQATTTQLLVRILDENDNSPVFDPKQYSASVAE-----N 2197
Query: 128 SNVSHWKKFSSIGSVSATDAD 148
+++ + + VSATD D
Sbjct: 2198 ASIG-----AMVLQVSATDVD 2213
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 29/178 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYSI G+ N F++ T GV+ V +++ E A+Y+L + A D
Sbjct: 2220 IRYSIMTGDQNQDFSISEDT------------GVVRVAK-NLNYERNARYTLTVRAEDCA 2266
Query: 88 GINKAE--THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
N A + + +LD NDN P F Y V +++++ N + + +V+A
Sbjct: 2267 VENSASDTAELIIGILDINDNRPTFLDSPYLARV--MENTVPPNDGY------VLTVNAY 2318
Query: 146 DAD----GDKVAYKLA-VPSNLVVIVPQTGEL-LLTGDPPSDDVEYELTVEAHDLQSP 197
DAD +V Y L S+L I TG + LL EY LT+ A D SP
Sbjct: 2319 DADTPPLNSQVRYFLKEGDSDLFRINASTGAIALLKQLDRETQSEYILTLVAMDTGSP 2376
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 15/93 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y I +GN + F + G L V + +DREE Y+L ++ D
Sbjct: 1014 ISYEIIEGNADRMFGV-------------FPDGYLFVRA-PLDREERDYYALTVSCQDSG 1059
Query: 88 GINKAET-HVTVDVLDENDNSPVFSQKVYRFIV 119
+++ V + V+DENDN+P F+ + F +
Sbjct: 1060 DPSRSSVVPVVIHVIDENDNAPQFTNSTFTFSI 1092
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 15/87 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
V Y + +GN F+L + T L + +DRE + L++ A D
Sbjct: 1242 VYYFLAKGNGAGLFSLDSATGQ-------------LTLARKLDRESQDVHHLIVEARDAA 1288
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQ 112
+KG + +++ VLDENDN+P F+Q
Sbjct: 1289 LKGPLSSNATISIVVLDENDNAPEFTQ 1315
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTV--DVLDENDNSPVFS 111
S ++G+L +T+ +D EEV Y L++ A D G T +TV +VLD NDN+P+F
Sbjct: 1873 SLNPQTGMLTLTA-RLDYEEVQHYILIVQAQD-SGQPSLSTTITVYCNVLDLNDNAPLFD 1930
Query: 112 QKVY 115
Y
Sbjct: 1931 PMSY 1934
>gi|156351334|ref|XP_001622464.1| predicted protein [Nematostella vectensis]
gi|156209012|gb|EDO30364.1| predicted protein [Nematostella vectensis]
Length = 2058
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 93/229 (40%), Gaps = 42/229 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ GT V + L K + YSI G+ F + N T EIR
Sbjct: 1203 ENASIGTNVTKITAL----DKDIGDTISYSIANGDPYGLFTIDN-VTGEIR--------- 1248
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
T ++DRE V QY L + A D + V V V D NDN PVFS Y
Sbjct: 1249 ---TVAELDRENVTQYELFVQAKDSVNLVSDLLKVVVQVEDVNDNPPVFSMPGY------ 1299
Query: 122 LKSSLNSNVSHWKKF---SSIGSVSATDAD-GDKVAYKLAVPSNL---VVIVPQTGELLL 174
+ +W++ +SI V A DAD GD A ++ N+ V + TG + L
Sbjct: 1300 -------TIEYWEESPEGTSILQVKAIDADIGDNAAVLYSIVENVTDYVTVNAITGVISL 1352
Query: 175 TGDPPSDDVE--YELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQD 218
+VE + T+ A D PS+ + + L NSPV +
Sbjct: 1353 GSSQLDREVEEYFNFTIRATDSGVPSKSSTASVAIKLVDINDNSPVFNN 1401
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 122/293 (41%), Gaps = 63/293 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ ++I+ G+D F++ SG L+ T+ ++DRE +A Y+L ++A D
Sbjct: 529 LSFNISAGDDGGHFSING-------------SG-LVTTARELDRETIATYTLTVSAYD-H 573
Query: 88 GINKAETHV--TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK-----FSSIG 140
G++ HV TV+VLDENDN+P + + ++ +N+S SSI
Sbjct: 574 GVSSRHKHVQLTVNVLDENDNTPQITDGL----------TITTNISEGAGGGTVLLSSIA 623
Query: 141 SVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQS 196
+V ++ Y ++ + + TG L ++ P D E Y+L + D S
Sbjct: 624 AVDPDAGSNGQLTYSMSGGDSRFTLNSATGRLQIS--PTGLDRELKDSYDLIINVTDNGS 681
Query: 197 PSRYAREPAQVWL---QFNSPVLQ---DEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRI 250
P V + N+P + L + E P I K + I
Sbjct: 682 PPNTNSTTVHVTILDVNDNTPAFDPNPAQSLATYVITVDEGPGTINKTLI--------DI 733
Query: 251 DFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDE-NGDVRVKKRWDFE 302
+ ++ D + G++ ++L DE+ + +D G++ V+K D E
Sbjct: 734 NATDPDADANGKVAYSLSG----------DEHGFFRLDPVTGELSVRKELDRE 776
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 32/178 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
VRY I+ GN + F++ +++ ++ T+ +DRE+ A Y+L+ITA D
Sbjct: 1538 VRYYISSGNTSLMFSV-------------NETTGIISTTSTLDREQNASYTLIITAKD-H 1583
Query: 88 GINKAE--THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
GI E T V + + D NDN P+FS+ VY L+ S+ + K + + V AT
Sbjct: 1584 GIPALESNTSVMITIEDVNDNKPLFSKSVYNVT---LRESV------FLK-TQVVQVIAT 1633
Query: 146 DAD---GDKVAYKLAV--PSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSP 197
D D + YK+ ++ I TG + + + Y LTV A DL +P
Sbjct: 1634 DPDEGANGQFTYKITAGDTDDVFYIDANTGLITIKAKLDYEKTSLYNLTVSAQDLGTP 1691
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 17/117 (14%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS +GT V L + + + + + Y +T GN + F++ N T
Sbjct: 930 LENSPTGTPV--LRVHASDRDQGANGKITYKLTNGNKDDAFSINNVTGE----------- 976
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVK--GINKAETHVTVDVLDENDNSPVFSQKVY 115
+ +G IDRE V + L + A D K V + V DENDN P FS Y
Sbjct: 977 --ITVAGVIDREAVHTFVLTVQAEDQGEPSSRKTFAEVVITVKDENDNFPQFSFTGY 1031
>gi|126290918|ref|XP_001377431.1| PREDICTED: protocadherin beta-2-like [Monodelphis domestica]
Length = 795
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 75/160 (46%), Gaps = 22/160 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT D+ K E ++T+ + D NDN PVF+ Y+ + +
Sbjct: 403 LVTEGALDRERRAEYNITITVMDLGSPRLKTEHNITIWISDINDNPPVFTLTAYKLYLQE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H IGSVSA D D KV Y L P N + I G
Sbjct: 463 ----NNSPALH------IGSVSARDRDSGINAKVTYSLLPPENGDLPLFSYISINSDNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ 210
L + ++ ++ TV A D SPS ++ QV +Q
Sbjct: 513 LYALRSLDYETIQAFQFTVTATDGGSPSLSSQALVQVVVQ 552
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 24 PHQLVRYSITQGNDNHTFALKN----PTTH---EIRNSTESKSGVLLVTSGDIDREEVAQ 76
P +++R Q D +L+N P H +IR +E + LV + +DREE+ +
Sbjct: 148 PGKIIRLDGAQDLDVGINSLQNYTVSPNPHFQVQIRARSEGRKYPELVLNKALDREELPE 207
Query: 77 YSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVY 115
L +TA D ++ T + V ++D NDN+P F ++ Y
Sbjct: 208 IRLTLTALDGGSPPRSGTAQIRVLIVDVNDNAPEFGRQNY 247
>gi|156361309|ref|XP_001625460.1| predicted protein [Nematostella vectensis]
gi|156212295|gb|EDO33360.1| predicted protein [Nematostella vectensis]
Length = 460
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 95/207 (45%), Gaps = 38/207 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V +SI +GN + F++ + +GV+ T+ +D E+V +Y+LVI ATD
Sbjct: 260 VLFSILEGNSDGKFSI------------DQNTGVV-TTNKSLDYEDVTEYTLVIQATDCG 306
Query: 88 G--INKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+N ++ + V V++ NDNSPVFSQK+Y + + N+ V H I V A
Sbjct: 307 DPPLNSSQPGMLHVSVVNINDNSPVFSQKIYSASIDE-----NTTVGHV-----ILRVQA 356
Query: 145 TDAD----GDKVAYK-LAVPSNLVVIV-PQTGELLLTGDPPSDDV-EYELTVEAHDLQSP 197
TD D + Y L SN V P TG L + + V EY LT+ HD P
Sbjct: 357 TDRDHVNSSSILVYSILNTTSNGTFTVDPHTGVLRTSQRLDRETVTEYTLTITVHDSGDP 416
Query: 198 SRYAREPAQVWLQF-----NSPVLQDE 219
A + A V + N PV E
Sbjct: 417 MLNAAQTATVSITVLDENDNVPVFDQE 443
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 52/98 (53%), Gaps = 16/98 (16%)
Query: 21 HKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLV 80
H + ++ YSI N TF + +P T +R TS +DRE V +Y+L
Sbjct: 361 HVNSSSILVYSILNTTSNGTFTV-DPHTGVLR------------TSQRLDRETVTEYTLT 407
Query: 81 ITATDVKG--INKAETH-VTVDVLDENDNSPVFSQKVY 115
IT D +N A+T V++ VLDENDN PVF Q+VY
Sbjct: 408 ITVHDSGDPMLNAAQTATVSITVLDENDNVPVFDQEVY 445
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 119/286 (41%), Gaps = 53/286 (18%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG- 88
YSI N TF + +P T +R TS +DRE V +Y+L IT D
Sbjct: 50 YSILNTTSNGTFTV-DPHTGVLR------------TSQRLDRETVTEYTLTITVHDSGDP 96
Query: 89 -INKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+N A+ V++ VLDENDN PVF Q+VY S+ N++ + + +
Sbjct: 97 MLNAAQPAIVSITVLDENDNVPVFDQEVYSV-------SIPENITVGAHILLLNARDKDE 149
Query: 147 ADGDKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREP 204
++ Y L A+ S + TG++ + V+Y E S +A +
Sbjct: 150 GVNAEIRYFLKDAIVSKRFSMNDTTGQITI-----KQAVDY----EERSSYSFEVFASDG 200
Query: 205 AQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVR------PTKRIDFSETDGE 258
+ L +S V + +ID P+ + R + V ++ S+ D
Sbjct: 201 GEARLTGSSSV-----RITIIDVNDNRPYFLPTRYYVQLVENVAIGTTVTQLTASDLDSS 255
Query: 259 MEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEEL 304
+ G+++F++ + KF I D+N G V K D+E++
Sbjct: 256 LNGKVLFSILEGNSDGKFSI-DQN-------TGVVTTNKSLDYEDV 293
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 23/211 (10%)
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAY 154
+ +LD NDN P F Q + + + ++ + I ++ ATDAD K+ Y
Sbjct: 1 ISILDINDNRPKFPQPYNKIEITE----------GTRESTMILTLQATDADSGMNAKLVY 50
Query: 155 K-LAVPSNLVVIV-PQTGELLLTGDPPSDDV-EYELTVEAHDLQSPSRYAREPAQVWLQF 211
L SN V P TG L + + V EY LT+ HD P A +PA V +
Sbjct: 51 SILNTTSNGTFTVDPHTGVLRTSQRLDRETVTEYTLTITVHDSGDPMLNAAQPAIVSIT- 109
Query: 212 NSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKET 271
VL + + + D++ + E V + ++ + D + I + L+
Sbjct: 110 ---VLDENDNVPVFDQEVYSVSIPENITVGAHIL---LLNARDKDEGVNAEIRYFLKDAI 163
Query: 272 EREKFKIRDENPWITVDENGDVRVKKRWDFE 302
++F + D IT+ + D + + FE
Sbjct: 164 VSKRFSMNDTTGQITIKQAVDYEERSSYSFE 194
>gi|426231039|ref|XP_004009556.1| PREDICTED: protocadherin beta-8 [Ovis aries]
Length = 771
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 75/152 (49%), Gaps = 30/152 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTERPLDRETRAEYNITITVTDLGAPRLKTEHNITVLVSDVNDNAPAFTQTSYTLWVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKL------AVP-SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L VP ++LV I P G
Sbjct: 463 ----NNSPALH------IGSVSATDTDAGANAQVTYSLLPSSDSPVPLASLVSINPDNGH 512
Query: 172 LL-LTGDPPSDDVE----YELTVEAHDLQSPS 198
L LT S D E +E V A D SP+
Sbjct: 513 LFALT----SLDYEALRAFEFRVGATDRGSPA 540
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE A+ L +TA D ++ T HV ++V+D NDN+P F Q YR + +
Sbjct: 194 LVLDKVLDREEEAELRLTLTAQDGGSPPRSGTAHVYIEVVDINDNAPEFEQPFYRVKIPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVV----IVPQTGELLL 174
K F + VSATD D +++Y L+ S V I TGE+ L
Sbjct: 254 ---------DSPKGFLVV-KVSATDVDIGVNGEISYSLSQASEDVSKTFEINAMTGEIRL 303
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+ + YE+++EA D
Sbjct: 304 KKQLDFETTQSYEVSIEASD 323
>gi|7407146|gb|AAF61929.1|AF231023_1 protocadherin Flamingo 1 [Homo sapiens]
Length = 3312
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 80/280 (28%), Positives = 117/280 (41%), Gaps = 53/280 (18%)
Query: 42 ALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDV 100
AL N + E+ S + +SG L+ T+ +DRE + ++ L +TA D A T V V V
Sbjct: 366 ALMNSRSLELF-SIDPQSG-LIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTV 423
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLA 157
D ND+SPVF Q YR +L NV ++ I + ATD D A Y+
Sbjct: 424 ADRNDHSPVFEQAQYR-------ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFV 473
Query: 158 VPSNLVV-------IVPQTGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVW 208
P I P++G + +G + +E YEL VEA D Q P P
Sbjct: 474 GPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSAT 528
Query: 209 LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGR 262
++ + VL D AP EKR V + VRP R+ ++ D + G
Sbjct: 529 VRVHITVL---------DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGL 579
Query: 263 IVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ + + R F I G+++V DFE
Sbjct: 580 VHYNIISGNSRGHFAID--------SLTGEIQVVAPLDFE 611
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 489 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 547
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 548 KRY---VAQVREDV-------RPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDS 597
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 598 LTGEIQVVA--PLDFEAEREYALRIRAQDAGRP 628
Score = 42.0 bits (97), Expect = 0.39, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 30/179 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 1078 ENSIVGSVVA--QITAVDPDEGPNAHIMYQIVEGNIPELFQM------------DIFSGE 1123
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIV 119
L D+D E +Y +V+ AT +++A HV + +D+NDNSPV + Q ++ V
Sbjct: 1124 LTALI-DLDYEARQEYVIVVQATSAPLVSRATVHVRL--VDQNDNSPVLNNFQILFNNYV 1180
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
+ + S + IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1181 SNRSDTFPSGI--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1231
Score = 41.2 bits (95), Expect = 0.59, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y
Sbjct: 711 SGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHL------- 763
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
LN + + +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 764 RLNEDAA---VGTSVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLD 820
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 821 YKQERYFKLVLTASD 835
Score = 41.2 bits (95), Expect = 0.63, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 981 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1028
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V+ Y L A D +G+ T V++ V+ D NDN+PVF + + V + NS V
Sbjct: 1029 AVSVYELTAYAVD-RGVPPLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1082
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1083 G-----SVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1137
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 1138 YVIVVQATSAPLVSRATVHVRLVDQNDNSPVLNNFQIL 1175
Score = 40.8 bits (94), Expect = 0.77, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 565 LRVTATDRDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVVA-PLDFE 611
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y+L I A D ++ ++ V+D ND+ P+F ++ V + + L +V
Sbjct: 612 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLE-NAPLGHSV 670
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKLA--VPSNLVVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L P VI TG + ++G + VE Y
Sbjct: 671 IH------IQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYFF 724
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 725 GVEARDHGSP 734
Score = 38.9 bits (89), Expect = 3.6, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 22/177 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKV 114
++ SG + + + +D E+ Y+L ITA D KA+T +V V V D NDN+P F
Sbjct: 907 DADSGAITLQA-PLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASH 965
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN---LVVIVPQ 168
Y +V + F+S+ +SATD D +V Y + I P
Sbjct: 966 YTGLVSE----------DAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPT 1015
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQL 221
+G + + V YELT A D P QV +Q N+PV E+
Sbjct: 1016 SGIVRTVRRLDREAVSVYELTAYAVDRGVPPLRTPVSIQVMVQDVNDNAPVFPAEEF 1072
Score = 38.1 bits (87), Expect = 4.9, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ GT V + V + + + + Y IT GN + FA+ ++ GV
Sbjct: 767 EDAAVGTSV----VSVTAVDRDANSAISYQITGGNTRNRFAI------------STQGGV 810
Query: 62 LLVTSG-DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +D ++ + LV+TA+D + ++ +V +++ D N + PVF Y V
Sbjct: 811 GLVTLALPLDYKQERYFKLVLTASD-RALHD-HCYVHINITDANTHRPVFQSAHYSVSVN 868
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPP 179
+ + S+I +SA+D D G+ + NL +T P
Sbjct: 869 EDRP----------MGSTIVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAP 918
Query: 180 ---SDDVEYELTVEAHDLQSPSR 199
D V Y L + A D P +
Sbjct: 919 LDYEDQVTYTLAITARDNGIPQK 941
>gi|397495185|ref|XP_003818440.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 isoform 1
[Pan paniscus]
Length = 3312
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 80/280 (28%), Positives = 117/280 (41%), Gaps = 53/280 (18%)
Query: 42 ALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDV 100
AL N + E+ S + +SG L+ T+ +DRE + ++ L +TA D A T V V V
Sbjct: 366 ALMNSRSLELF-SIDPQSG-LIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTV 423
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLA 157
D ND+SPVF Q YR +L NV ++ I + ATD D A Y+
Sbjct: 424 ADRNDHSPVFEQAQYR-------ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFV 473
Query: 158 VPSNLVV-------IVPQTGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVW 208
P I P++G + +G + +E YEL VEA D Q P P
Sbjct: 474 GPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSAT 528
Query: 209 LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGR 262
++ + VL D AP EKR V + VRP R+ ++ D + G
Sbjct: 529 VRVHITVL---------DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGL 579
Query: 263 IVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ + + R F I G+++V DFE
Sbjct: 580 VHYNIISGNSRGHFAID--------SLTGEIQVVAPLDFE 611
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 489 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 547
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 548 KRY---VAQVREDV-------RPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDS 597
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 598 LTGEIQVVA--PLDFEAEREYALRIRAQDAGRP 628
Score = 41.6 bits (96), Expect = 0.56, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 30/179 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 1078 ENSIVGSVVA--QITAVDPDEGPNAHIMYQIVEGNIPELFQM------------DIFSGE 1123
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIV 119
L D+D E +Y +V+ AT +++A H+ + +D+NDNSPV + Q ++ V
Sbjct: 1124 LTALI-DLDYEARQEYVIVVQATSAPLVSRATVHIRL--VDQNDNSPVLNNFQILFNNYV 1180
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
+ + S + IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1181 SNRSDTFPSGI--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1231
Score = 41.2 bits (95), Expect = 0.59, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y
Sbjct: 711 SGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHL------- 763
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
LN + + +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 764 RLNEDAA---VGTSVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLD 820
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 821 YKQERYFKLVLTASD 835
Score = 41.2 bits (95), Expect = 0.71, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 981 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1028
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V+ Y L A D +G+ T V++ V+ D NDN+PVF + + V + NS V
Sbjct: 1029 AVSVYELTAYAVD-RGVPPLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1082
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1083 G-----SVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1137
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 1138 YVIVVQATSAPLVSRATVHIRLVDQNDNSPVLNNFQIL 1175
Score = 40.8 bits (94), Expect = 0.77, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 565 LRVTATDRDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVVA-PLDFE 611
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y+L I A D ++ ++ V+D ND+ P+F ++ V + + L +V
Sbjct: 612 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLE-NAPLGHSV 670
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKLA--VPSNLVVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L P VI TG + ++G + VE Y
Sbjct: 671 IH------IQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYFF 724
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 725 GVEARDHGSP 734
Score = 38.9 bits (89), Expect = 3.6, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 22/177 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKV 114
++ SG + + + +D E+ Y+L ITA D KA+T +V V V D NDN+P F
Sbjct: 907 DADSGAITLQA-PLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASH 965
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN---LVVIVPQ 168
Y +V + F+S+ +SATD D +V Y + I P
Sbjct: 966 YTGLVSE----------DAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPT 1015
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQL 221
+G + + V YELT A D P QV +Q N+PV E+
Sbjct: 1016 SGIVRTVRRLDREAVSVYELTAYAVDRGVPPLRTPVSIQVMVQDVNDNAPVFPAEEF 1072
Score = 38.1 bits (87), Expect = 5.3, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ GT V + V + + + + Y IT GN + FA+ ++ GV
Sbjct: 767 EDAAVGTSV----VSVTAVDRDANSAISYQITGGNTRNRFAI------------STQGGV 810
Query: 62 LLVTSG-DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +D ++ + LV+TA+D + ++ +V +++ D N + PVF Y V
Sbjct: 811 GLVTLALPLDYKQERYFKLVLTASD-RALHD-HCYVHINITDANTHRPVFQSAHYSVSVN 868
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPP 179
+ + S+I +SA+D D G+ + NL +T P
Sbjct: 869 EDRPV----------GSTIVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAP 918
Query: 180 ---SDDVEYELTVEAHDLQSPSR 199
D V Y L + A D P +
Sbjct: 919 LDYEDQVTYTLAITARDNGIPQK 941
>gi|145309304|ref|NP_001398.2| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Homo
sapiens]
gi|229462826|sp|Q9NYQ7.2|CELR3_HUMAN RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 3;
AltName: Full=Cadherin family member 11; AltName:
Full=Epidermal growth factor-like protein 1;
Short=EGF-like protein 1; AltName: Full=Flamingo homolog
1; Short=hFmi1; AltName: Full=Multiple epidermal growth
factor-like domains protein 2; Short=Multiple EGF-like
domains protein 2; Flags: Precursor
Length = 3312
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 80/280 (28%), Positives = 117/280 (41%), Gaps = 53/280 (18%)
Query: 42 ALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDV 100
AL N + E+ S + +SG L+ T+ +DRE + ++ L +TA D A T V V V
Sbjct: 366 ALMNSRSLELF-SIDPQSG-LIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTV 423
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLA 157
D ND+SPVF Q YR +L NV ++ I + ATD D A Y+
Sbjct: 424 ADRNDHSPVFEQAQYR-------ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFV 473
Query: 158 VPSNLVV-------IVPQTGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVW 208
P I P++G + +G + +E YEL VEA D Q P P
Sbjct: 474 GPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSAT 528
Query: 209 LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGR 262
++ + VL D AP EKR V + VRP R+ ++ D + G
Sbjct: 529 VRVHITVL---------DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGL 579
Query: 263 IVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ + + R F I G+++V DFE
Sbjct: 580 VHYNIISGNSRGHFAID--------SLTGEIQVVAPLDFE 611
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 489 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 547
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 548 KRY---VAQVREDV-------RPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDS 597
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 598 LTGEIQVVA--PLDFEAEREYALRIRAQDAGRP 628
Score = 42.0 bits (97), Expect = 0.39, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 30/179 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 1078 ENSIVGSVVA--QITAVDPDEGPNAHIMYQIVEGNIPELFQM------------DIFSGE 1123
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIV 119
L D+D E +Y +V+ AT +++A HV + +D+NDNSPV + Q ++ V
Sbjct: 1124 LTALI-DLDYEARQEYVIVVQATSAPLVSRATVHVRL--VDQNDNSPVLNNFQILFNNYV 1180
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
+ + S + IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1181 SNRSDTFPSGI--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1231
Score = 41.2 bits (95), Expect = 0.59, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y
Sbjct: 711 SGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHL------- 763
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
LN + + +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 764 RLNEDAA---VGTSVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLD 820
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 821 YKQERYFKLVLTASD 835
Score = 41.2 bits (95), Expect = 0.63, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 981 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1028
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V+ Y L A D +G+ T V++ V+ D NDN+PVF + + V + NS V
Sbjct: 1029 AVSVYELTAYAVD-RGVPPLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1082
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1083 G-----SVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1137
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 1138 YVIVVQATSAPLVSRATVHVRLVDQNDNSPVLNNFQIL 1175
Score = 40.8 bits (94), Expect = 0.77, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 565 LRVTATDRDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVVA-PLDFE 611
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y+L I A D ++ ++ V+D ND+ P+F ++ V + + L +V
Sbjct: 612 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLE-NAPLGHSV 670
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKLA--VPSNLVVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L P VI TG + ++G + VE Y
Sbjct: 671 IH------IQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYFF 724
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 725 GVEARDHGSP 734
Score = 38.9 bits (89), Expect = 3.6, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 22/177 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKV 114
++ SG + + + +D E+ Y+L ITA D KA+T +V V V D NDN+P F
Sbjct: 907 DADSGAITLQA-PLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASH 965
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN---LVVIVPQ 168
Y +V + F+S+ +SATD D +V Y + I P
Sbjct: 966 YTGLVSE----------DAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPT 1015
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQL 221
+G + + V YELT A D P QV +Q N+PV E+
Sbjct: 1016 SGIVRTVRRLDREAVSVYELTAYAVDRGVPPLRTPVSIQVMVQDVNDNAPVFPAEEF 1072
Score = 38.1 bits (87), Expect = 4.9, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ GT V + V + + + + Y IT GN + FA+ ++ GV
Sbjct: 767 EDAAVGTSV----VSVTAVDRDANSAISYQITGGNTRNRFAI------------STQGGV 810
Query: 62 LLVTSG-DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +D ++ + LV+TA+D + ++ +V +++ D N + PVF Y V
Sbjct: 811 GLVTLALPLDYKQERYFKLVLTASD-RALHD-HCYVHINITDANTHRPVFQSAHYSVSVN 868
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPP 179
+ + S+I +SA+D D G+ + NL +T P
Sbjct: 869 EDRP----------MGSTIVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAP 918
Query: 180 ---SDDVEYELTVEAHDLQSPSR 199
D V Y L + A D P +
Sbjct: 919 LDYEDQVTYTLAITARDNGIPQK 941
>gi|348581860|ref|XP_003476695.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 isoform 2
[Cavia porcellus]
Length = 3309
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 80/281 (28%), Positives = 120/281 (42%), Gaps = 55/281 (19%)
Query: 42 ALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK--AETHVTVD 99
AL N + E+ S + SG L+ T+ +DRE + ++ L +TA D G+ + A T V V
Sbjct: 356 ALMNSRSLELF-SIDPHSG-LIRTAAALDRESMERHYLRVTAQD-HGLPRLSATTMVAVT 412
Query: 100 VLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKL 156
V D ND+SPVF Q YR +L NV ++ I + ATD D + Y+
Sbjct: 413 VADRNDHSPVFEQAQYR-------ETLRENV---EEGYPILQLRATDGDAPLNANLHYRF 462
Query: 157 AVP-------SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQV 207
P + I P++G + +G + +E YEL VEA D Q P P
Sbjct: 463 VGPPATRKAAAAAFEIDPRSGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSA 517
Query: 208 WLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEG 261
++ + VL D AP EKR V + VRP R+ ++ D + G
Sbjct: 518 TVRVHITVL---------DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDQDKDANG 568
Query: 262 RIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ + + R F I G+++V DFE
Sbjct: 569 LVHYNIISGNSRGHFAID--------SLTGEIQVVAPLDFE 601
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 479 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 537
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 538 KRY---VAQVREDV-------RPHTVVLRVTATDQDKDANGLVHYNIISGNSRGHFAIDS 587
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 588 LTGEIQVVA--PLDFEAEREYVLRIRAQDAGRP 618
Score = 43.1 bits (100), Expect = 0.19, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 555 LRVTATDQDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVVA-PLDFE 601
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y L I A D ++ ++ V+D ND++P+F ++ V + + L +V
Sbjct: 602 AEREYVLRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLE-NAPLGHSV 660
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKLA--VPSNLVVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L P VI TG + ++G + VE Y
Sbjct: 661 IH------IQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGSLDRESVEHYFF 714
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 715 GVEARDYGSP 724
Score = 42.7 bits (99), Expect = 0.24, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y
Sbjct: 701 SGSLDRESVEHYFFGVEARDYGSPPLSASASVTVTVLDVNDNRPEFTTKEYHL------- 753
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
LN + + +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 754 RLNEDAA---VGTSVVSVTAVDRDANNAISYQITGGNTRNRFAISTQGGVGLVTLALPLD 810
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 811 YKQERYFKLVLTASD 825
Score = 42.4 bits (98), Expect = 0.26, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 26/177 (14%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 1068 ENSIVGSVVA--QITAVDPDEGPNAHIMYQIVEGNIPELFQM------------DIFSGE 1113
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L D+D E +Y +V+ AT +++A HV + +D+NDNSPV + F
Sbjct: 1114 LTALI-DLDYEARQEYVIVVQATSAPLVSRATVHVRL--VDQNDNSPVLNNFQILF---- 1166
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
++ SN S +IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1167 --NNYVSNRSDTFPSGTIGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1221
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 87/218 (39%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 971 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1018
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V Y L A D +G+ T V++ V+ D NDN+PVF + + V + NS V
Sbjct: 1019 AVPVYELTAYAVD-RGVPPLRTPVSIQVIVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1072
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1073 G-----SVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1127
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 1128 YVIVVQATSAPLVSRATVHVRLVDQNDNSPVLNNFQIL 1165
Score = 38.1 bits (87), Expect = 4.9, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKV 114
++ SG + + + +D E+ Y+L ITA D KA+T +V V V D NDN+P F
Sbjct: 897 DADSGAITLQA-PLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVTSH 955
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
Y +V + F+S+ +SATD D
Sbjct: 956 YTGLVSE----------DAPPFTSVLQISATDRDA 980
>gi|351705183|gb|EHB08102.1| Protocadherin beta-6 [Heterocephalus glaber]
Length = 749
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 23/124 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE ++Y++ IT TD+ K + ++TV V D NDN+P F+Q Y V +
Sbjct: 378 LVTDGPLDRERKSEYNITITVTDLGTPRLKTQHNITVQVSDVNDNAPTFTQTSYTLWVPE 437
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP---------SNLVVIVPQT 169
NS H IG++SATD D +V Y L +P ++LV I T
Sbjct: 438 ----NNSPALH------IGTISATDRDSGTNAQVTYSLLLPPPRDPHPGFASLVSINADT 487
Query: 170 GELL 173
G+L
Sbjct: 488 GQLF 491
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 57/117 (48%), Gaps = 15/117 (12%)
Query: 45 NPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLD 102
NP H + R+ ++ + LV +DREE Q L ITA D + T + + VLD
Sbjct: 151 NPHFHILTRSRSDGRKYPELVLDKALDREEQPQLRLRITALDGGDPPRTGTSEIRIMVLD 210
Query: 103 ENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL 156
NDN+P F+ ++Y V + NS + S + +VSA D D KV+Y L
Sbjct: 211 SNDNAPEFAHQLYEATVPE-----NSPLG-----SLVITVSAIDLDEGSFGKVSYAL 257
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 73/177 (41%), Gaps = 32/177 (18%)
Query: 28 VRYSITQGND-NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
V Y++ Q D N TF + N T EIR +D E+ Y L + ATD
Sbjct: 253 VSYALLQDYDINQTFEI-NALTGEIR------------VRNTLDFEKFQSYHLDVEATDG 299
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
G+ + + V VLD NDNSP + SSLNS++ + S D
Sbjct: 300 GGLT-GKCSLIVQVLDVNDNSPELT-----------VSSLNSHIPENLPGVIVAVFSVYD 347
Query: 147 ADGDKVAYKLA-VPSNLVVIVPQTGE--LLLTGDPPSD---DVEYELTVEAHDLQSP 197
AD + + + N+ ++ + E L D P D EY +T+ DL +P
Sbjct: 348 ADSEHNQQVICSIDDNIPFLLKPSIENFYTLVTDGPLDRERKSEYNITITVTDLGTP 404
>gi|156386258|ref|XP_001633830.1| predicted protein [Nematostella vectensis]
gi|156220905|gb|EDO41767.1| predicted protein [Nematostella vectensis]
Length = 4187
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 89/201 (44%), Gaps = 30/201 (14%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS GT V L + + ++YSI +GND F + T GV
Sbjct: 3283 ENSALGTFV--LQVFATDRDSGTNAQIKYSIAEGNDAKKFKIVEET------------GV 3328
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+ V SGDIDREEVA Y L + A D +G+ A+T V ++V D NDNSP FS ++
Sbjct: 3329 IKV-SGDIDREEVASYRLKVRAQD-QGLPPQVADTVVDIEVTDVNDNSPEFSSTNLTTVL 3386
Query: 120 GDLKSSL-NSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLT--G 176
+ SSL N+ V H + DA G+ Y+ + S L+T G
Sbjct: 3387 SE--SSLPNAAVIHLRPHDR-------DALGNGAPYQFTLISGDASRFKLHSNGLITKIG 3437
Query: 177 DPPSDDVEYELTVEAHDLQSP 197
D D +Y L V D P
Sbjct: 3438 DVSHSDGQYRLRVLVADNGHP 3458
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 21/103 (20%)
Query: 50 EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPV 109
+ R E K+GV+ V G +DRE V Y L I+A+D G+ + + +D+ D NDN P+
Sbjct: 2906 QARFGIERKTGVIFV-HGSLDRESVGSYDLNISASD--GLFTSFAQMKIDIEDANDNPPI 2962
Query: 110 FSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS----VSATDAD 148
+Q +Y V H K+ + +GS V ATDAD
Sbjct: 2963 CTQSIY--------------VEHIKENTPLGSTVLTVGATDAD 2991
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 39/202 (19%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQ---LVRYSITQGNDNHTFALKNPTTHEIRNSTESK 58
EN SG+ V V + K P L+RY+IT+GN+ + F + + +
Sbjct: 1115 ENLPSGSSV------VQVTAKDPDSGGSLLRYTITKGNEQNNFVI------------DPQ 1156
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVT--VDVLDENDNSPVFSQKVYR 116
SG L+ T +DRE ++Y L ++A+D G T VT V + DENDN P F +K +
Sbjct: 1157 SG-LITTLRPLDREFKSEYKLTVSASD-GGTPPVSTDVTFTVKITDENDNQPEFKEK--Q 1212
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPS----NLVVIVPQTGE 171
++VG S K F + V ATD D G + ++ N +I ++GE
Sbjct: 1213 YVVGVFARQATS-----KSF-GLYQVVATDEDIGSNADLRYSITKGNRDNKFIIDSRSGE 1266
Query: 172 LLLTGDPPSDDVEYELTVEAHD 193
+ T D Y+LT+ A D
Sbjct: 1267 -IFTNVSLVDGESYDLTIVAED 1287
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 42/197 (21%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
+L+ + + Y+I GN + F + + G + + +DREE
Sbjct: 1335 VLIIGAEDPDFDQITYNIASGNHGNKFTI-------------DRYGGFITVAHSLDREEK 1381
Query: 75 AQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWK 134
+ YSL + ATD G N A VT+++LD NDNSP +++ YR +H
Sbjct: 1382 SFYSLRVEATD--GYNTASVPVTINILDVNDNSPQPARREYR--------------AHVA 1425
Query: 135 KFSSIGSVSATDADGD-----KVAYKL-----AVPSNLVVIVPQTGELLLTGDPPSDDV- 183
+ S +G++ T D D +V Y + A ++L I +G +LT P +
Sbjct: 1426 ENSDVGTLVTTVKDPDAGVNGEVEYCIVQTAKAESASLFKIESHSGR-ILTVKPLDYETM 1484
Query: 184 -EYELTVEAHDLQSPSR 199
E+ LT++A D P R
Sbjct: 1485 QEHVLTIKASDRGIPKR 1501
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 34/193 (17%)
Query: 18 ASSHKHPHQLVRYSITQGNDNHTFAL--KNPTTHEIRNSTESKSGVLLVTSGDIDREEVA 75
A S + + ++ Y+I +G D+ F++ KN T H R +D E
Sbjct: 3192 AVSRESSNDVITYAILRGADSGLFSIDRKNGTIHVNRK---------------LDYETTK 3236
Query: 76 QYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWK 134
Y+L + A+D + ++ ++V + V D NDN P FS+K Y V D S+L + V
Sbjct: 3237 LYTLTVEASDAGPPVLRSTSYVRISVTDSNDNGPEFSEKRYSAKV-DENSALGTFVLQ-- 3293
Query: 135 KFSSIGSVSATDADGD---KVAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EYELT 188
V ATD D ++ Y +A ++ IV +TG + ++GD ++V Y L
Sbjct: 3294 -------VFATDRDSGTNAQIKYSIAEGNDAKKFKIVEETGVIKVSGDIDREEVASYRLK 3346
Query: 189 VEAHDLQSPSRYA 201
V A D P + A
Sbjct: 3347 VRAQDQGLPPQVA 3359
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 57/115 (49%), Gaps = 17/115 (14%)
Query: 41 FALKNPTTHEIRNSTE-----SKSGVLLVTSG-DIDREEVAQYSLVITATDVK-GINKAE 93
+ + + T+ I N +E +GV+ + +G D+DRE + Y +++ A D N A+
Sbjct: 1959 YPIGSTITYTIINPSELFHIVPSTGVMSIRAGFDLDRESIDAYQVIVQARDDSVPPNVAQ 2018
Query: 94 THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
V V V+D NDN PVF Y FIV L + + + IG ATDAD
Sbjct: 2019 AAVHVQVIDRNDNQPVFINSPY-FIVLQLGVA---------QGTIIGQAQATDAD 2063
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 92/219 (42%), Gaps = 43/219 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
+ Y IT+GN+ F + SK+G + T GD+D E ++ L + A D
Sbjct: 354 IMYVITRGNELGKFEIN------------SKTGQIY-TKGDLDYESRQRFDLTVAALDGV 400
Query: 86 -VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
++ + V V++LD ND+ P F YR DL L +S+ +VSA
Sbjct: 401 PLQSRKISTVPVVVNILDANDHDPEFKAPEYR---KDLYEDLTPG-------TSVFTVSA 450
Query: 145 TDADG---DKVAYKLA----VPSNLVVIVPQTGELLLTGDPPSDDVEYE---LTVEAHDL 194
D D KV Y LA VP I P TG + T + D E L V A D
Sbjct: 451 EDLDSGGNGKVRYSLANLRPVPFE---IEPDTGIIRTTTNLDRDTGLPEFINLQVRASDF 507
Query: 195 QSPSRYAREPAQVW----LQFNSPVLQDEQLLQMIDRKS 229
+P R E + N+PVL+ + ++DR +
Sbjct: 508 GTPLRRETETLVKMRVKEMNDNAPVLKQFKCNILVDRNA 546
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
LV YSI +G+ + F + N T E L + +DRE ++ Y+L I+A D
Sbjct: 720 LVLYSIVEGDVDSVFNI-NMFTGE------------LTVAMPLDRETISSYTLNISAVDC 766
Query: 87 -KGINKAETHVTVDVLDENDNSPVFSQKVY 115
K A T + V + D ND SPVF + VY
Sbjct: 767 GKHRKSAYTILNVKITDVNDCSPVFDKTVY 796
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 33/178 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
++Y+I G F + +P T IR T+G++D E Y L + A D +
Sbjct: 1034 LKYAIIDGTGVDKFII-DPDTGAIR------------TAGELDHEVADHYWLTVQAKDGE 1080
Query: 88 GIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
V ++++D ND +P F+ Y ++ + + SS+ V+A D
Sbjct: 1081 SYPLYTNIPVLINIVDLNDEAPYFAPSTYYPVLAE----------NLPSGSSVVQVTAKD 1130
Query: 147 AD--GDKVAYKLAVPS--NLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
D G + Y + + N VI PQ+G L+T P D EY+LTV A D +P
Sbjct: 1131 PDSGGSLLRYTITKGNEQNNFVIDPQSG--LITTLRPLDREFKSEYKLTVSASDGGTP 1186
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 25/127 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYSIT G F + +S+SGV+ + S + ++ Y L + +D
Sbjct: 2377 LRYSITGGQGRQHFQI------------DSQSGVITL-SRVVGIKQGKVYGLDVEVSD-- 2421
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
++ + + V V + D ND+SP+FS+ VY K S N N + + + + VSATD
Sbjct: 2422 SVHVSTSKVRVIIGDTNDHSPIFSEDVY-------KVSFNEN---YPEGTFVTMVSATDL 2471
Query: 148 DGDKVAY 154
D A+
Sbjct: 2472 DSGNYAH 2478
>gi|195341325|ref|XP_002037261.1| GM12831 [Drosophila sechellia]
gi|194131377|gb|EDW53420.1| GM12831 [Drosophila sechellia]
Length = 1347
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 26/169 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI GND FA+ +SGV++V +DRE + +Y L++ A D
Sbjct: 277 VVYSIISGNDLRQFAVG------------QESGVIIVIR-KLDRESLTRYQLILKAEDTG 323
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G++ + T V + V D ND +P F ++ V K +S+G V ATDA
Sbjct: 324 GLSSSAT-VNIKVTDINDKNPEFEASTLPYVF---------QVEEGKAQASVGVVHATDA 373
Query: 148 D-GDKVAYKLAVPSNLVVIVPQT-GELLLTGDPPSDDV-EYELTVEAHD 193
D G ++P+++ + T GE+L + + + EY+ V A D
Sbjct: 374 DEGINAEITYSIPTDIPFTINATSGEILTAKELDYEQLNEYKFVVTAKD 422
>gi|395856533|ref|XP_003800682.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Otolemur garnettii]
Length = 4378
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 80/280 (28%), Positives = 117/280 (41%), Gaps = 53/280 (18%)
Query: 42 ALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDV 100
AL N + E+ S + +SG L+ T+ +DRE + ++ L +TA D A T V V V
Sbjct: 474 ALMNSRSLELF-SIDPQSG-LIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTV 531
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLA 157
D ND+SPVF Q YR +L NV ++ I + ATD D A Y+
Sbjct: 532 ADRNDHSPVFEQAQYR-------ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFV 581
Query: 158 VPSNLVV-------IVPQTGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVW 208
P I P++G + +G + +E YEL VEA D Q P P
Sbjct: 582 GPPAARSAAAAAFEIDPRSGLISTSGRVDREHMENYELVVEASDQGQEPG-----PRSAT 636
Query: 209 LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGR 262
++ + VL D AP EKR V + VRP R+ ++ D + G
Sbjct: 637 VRVHITVL---------DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGL 687
Query: 263 IVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ + + R F I G+++V DFE
Sbjct: 688 VHYNIISGNSRGHFAID--------SLTGEIQVVAPLDFE 719
Score = 54.3 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 597 DPRSG-LISTSGRVDREHMENYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 655
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 656 KRY---VAQVREDV-------RPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDS 705
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 706 LTGEIQVVA--PLDFEAEREYVLRIRAQDAGRP 736
Score = 41.2 bits (95), Expect = 0.61, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 30/179 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 1186 ENSIVGSVVA--QITAVDPDEGPNAHIMYQIVEGNIPELFQM------------DIFSGE 1231
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIV 119
L D+D E +Y +V+ AT +++A H+ + +D+NDNSPV + Q ++ V
Sbjct: 1232 LTALI-DLDYEARQEYVIVVQATSAPLVSRATVHIRL--VDQNDNSPVLNNFQILFNNYV 1288
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
+ + S + IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1289 SNRSDTFPSGI--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1339
Score = 41.2 bits (95), Expect = 0.62, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y
Sbjct: 819 SGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHL------- 871
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
LN + + +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 872 RLNEDAA---VGTSVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLD 928
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 929 YKQERYFKLVLTASD 943
Score = 41.2 bits (95), Expect = 0.65, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 673 LRVTATDRDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVVA-PLDFE 719
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y L I A D ++ ++ V+D ND++P+F ++ V + + L +V
Sbjct: 720 AEREYVLRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLE-NAPLGHSV 778
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKLA--VPSNLVVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L P VI TG + ++G + VE Y
Sbjct: 779 IH------IQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYFF 832
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 833 GVEARDHGSP 842
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+D E+ Y+L ITA D KA+T +V V V D NDN+P F +Y +V +
Sbjct: 1027 LDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVTSLYTGLVSE------ 1080
Query: 128 SNVSHWKKFSSIGSVSATDADG 149
F+S+ +SATD D
Sbjct: 1081 ----DAPPFTSVLQISATDRDA 1098
Score = 38.5 bits (88), Expect = 4.8, Method: Composition-based stats.
Identities = 58/218 (26%), Positives = 86/218 (39%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 1089 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1136
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V Y L A D +G+ T V++ V D NDN+P+F + + V + NS V
Sbjct: 1137 AVPVYELTAYAVD-RGVPPLRTPVSIQVTVQDVNDNAPIFPAEEFEVRVKE-----NSIV 1190
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1191 G-----SVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1245
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 1246 YVIVVQATSAPLVSRATVHIRLVDQNDNSPVLNNFQIL 1283
>gi|307190371|gb|EFN74430.1| Cadherin-related tumor suppressor [Camponotus floridanus]
Length = 3233
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 102/246 (41%), Gaps = 49/246 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+ +G +DREE +Y L + A D G ET +T+ + D+NDN+P F + Y F +L
Sbjct: 1061 VTVAGYLDREEQDEYLLKVVAAD--GAWLTETALTITIQDQNDNAPEFDENTYHFHFPEL 1118
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELLL---- 174
+ V+H +G V+A D D ++Y L PS+L + P TG++
Sbjct: 1119 QPE----VAH------VGQVTAIDYDKQGPNSVISYNLLQPSDLFAVDPATGDVFSKRTL 1168
Query: 175 ----TGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSE 230
+ S + Y LTV A D P ++ V ++D +
Sbjct: 1169 RYKHSNRSSSPENLYSLTVIATDNGKPPMSSKTVVYV---------------NVVDANNN 1213
Query: 231 APHRIEKRRVTRAV--------RPTKRIDFSETDGEMEGRIVFALEKETEREK-FKIRDE 281
AP R E+R V R T+ I + D + + ++L + F I ++
Sbjct: 1214 AP-RFEQRSYLSPVPENYGEGKRITQLIAHDDADFGVNAEVSYSLTSMNSTDDFFAIEEQ 1272
Query: 282 NPWITV 287
W+ V
Sbjct: 1273 TGWVYV 1278
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 14/101 (13%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVG 120
LL SG +DRE+ + Y+L + A D +++ T+VTV VLDENDNSPVF + Y V
Sbjct: 324 LLRVSGPLDREQKSNYTLAVIARDRGEPSRSSSTNVTVMVLDENDNSPVFDPRQYSATVA 383
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV 158
+ N+++ +S+ VSA D D +V Y +A+
Sbjct: 384 E-----NASIG-----ASVLQVSAMDRDEGANGRVRYSIAM 414
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 89/220 (40%), Gaps = 34/220 (15%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE +Y L + A D G+ + + + V D NDN+P F Y F + +
Sbjct: 19 LDRETKEKYVLRVRADD--GLQHRDIVLNIQVTDTNDNAPTFQSTAYSFDIPE------- 69
Query: 129 NVSHWKKFSSIGSVSATDADGD----KVAYKLAV--PSNLVVIVPQTGELLLTGDPPSDD 182
+ + S +G V ATDAD + +++Y L +++ + P TG LT +
Sbjct: 70 ---NVPRGSRVGQVVATDADAEGPNSQLSYVLISDWANDVFSLNPSTGVFTLTASLDYEQ 126
Query: 183 VE-YELTVEAHDLQSP---SRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKR 238
V+ Y L V+A D P S V L N+P+++ PH +
Sbjct: 127 VQHYILVVQATDGGVPVLSSTVTVYCNVVDLNDNAPIVE------------TGPHAADIV 174
Query: 239 RVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKI 278
P + + D GRI++A+ E F +
Sbjct: 175 ENATIGTPVLTVTAQDLDSGDNGRILYAITGGDEDGNFGV 214
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 14/93 (15%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ +VRY I+ GN+ + F + H I +G +++ +D + V +Y L ITA
Sbjct: 1356 PNGIVRYKISAGNERNEFFV-----HSI-------TGAVIILK-PLDYDLVQEYQLNITA 1402
Query: 84 TDVKGINK-AETHVTVDVLDENDNSPVFSQKVY 115
TD+ K A + V+V D NDN P F+Q +Y
Sbjct: 1403 TDLGFEPKQAVATLIVNVSDINDNPPTFNQSIY 1435
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 77/181 (42%), Gaps = 32/181 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
VRYSI G+DN F + S+ G ++ + +++ E Y L I + D
Sbjct: 408 VRYSIAMGDDNRDFTI-------------SEDGGVIRVAKNLNFERKPCYYLTIRSEDCA 454
Query: 88 G-----INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
T VT+ VLD NDN+PVF Y L + + V F + V
Sbjct: 455 AEAGETPRSDTTQVTITVLDINDNAPVFLDSPY------LVHVMENMVPPDGGF--VIQV 506
Query: 143 SATDAD----GDKVAYKLA-VPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQS 196
A DAD D+V Y L ++L I TG++ L + + EY LT+ A D S
Sbjct: 507 KAYDADTPPYNDQVTYFLKEGDTDLFRINASTGDISLLRSLDRELMPEYTLTLVAMDTGS 566
Query: 197 P 197
P
Sbjct: 567 P 567
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 14/82 (17%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
YSI GN F + +P T +I T+ +DRE + Y L I A D
Sbjct: 1680 YSIIGGNHGQAFKV-DPQTGDIE------------TAKQLDRETMPAYDLTIGAIDTGSP 1726
Query: 90 NKAETH-VTVDVLDENDNSPVF 110
+ T V +D+LD NDN PVF
Sbjct: 1727 PQTGTATVHIDLLDVNDNGPVF 1748
>gi|119514200|gb|ABL75863.1| protocadherin 2A23 [Takifugu rubripes]
Length = 938
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 82/159 (51%), Gaps = 22/159 (13%)
Query: 50 EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSP 108
E+R+ E +LV +DRE A +SLV+TA D K + ++ V VLD NDN+P
Sbjct: 182 EVRDKGEDGKIPILVLQKSLDRETAASHSLVLTALDGGKPPKSGQMNILVKVLDVNDNTP 241
Query: 109 VFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL--AVPSN-- 161
VFS+ VY + + N+ + S++ V+ATD D +V+Y +V +N
Sbjct: 242 VFSKDVYSVTLPE-----NAPLG-----SAVVQVNATDLDEGQNGEVSYSFGNSVSNNIF 291
Query: 162 -LVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSP 197
L I P TGE+ + G D D +YE+ +EA D P
Sbjct: 292 QLFGINPSTGEITVKGLIDYEQKD-KYEIEIEASDKGLP 329
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE+ +Y L ITA D + +E +TV V D NDN P FS Y F + +
Sbjct: 409 LVTKSALDREQTDKYDLTITAKDAGQPSLSSEKTITVVVSDVNDNRPEFSLSPYTFYISE 468
>gi|348581858|ref|XP_003476694.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 isoform 1
[Cavia porcellus]
Length = 3302
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 80/281 (28%), Positives = 120/281 (42%), Gaps = 55/281 (19%)
Query: 42 ALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK--AETHVTVD 99
AL N + E+ S + SG L+ T+ +DRE + ++ L +TA D G+ + A T V V
Sbjct: 356 ALMNSRSLELF-SIDPHSG-LIRTAAALDRESMERHYLRVTAQD-HGLPRLSATTMVAVT 412
Query: 100 VLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKL 156
V D ND+SPVF Q YR +L NV ++ I + ATD D + Y+
Sbjct: 413 VADRNDHSPVFEQAQYR-------ETLRENV---EEGYPILQLRATDGDAPLNANLHYRF 462
Query: 157 AVP-------SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQV 207
P + I P++G + +G + +E YEL VEA D Q P P
Sbjct: 463 VGPPATRKAAAAAFEIDPRSGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSA 517
Query: 208 WLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEG 261
++ + VL D AP EKR V + VRP R+ ++ D + G
Sbjct: 518 TVRVHITVL---------DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDQDKDANG 568
Query: 262 RIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ + + R F I G+++V DFE
Sbjct: 569 LVHYNIISGNSRGHFAID--------SLTGEIQVVAPLDFE 601
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 479 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 537
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 538 KRY---VAQVREDV-------RPHTVVLRVTATDQDKDANGLVHYNIISGNSRGHFAIDS 587
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 588 LTGEIQVVA--PLDFEAEREYVLRIRAQDAGRP 618
Score = 42.7 bits (99), Expect = 0.20, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 555 LRVTATDQDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVVA-PLDFE 601
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y L I A D ++ ++ V+D ND++P+F ++ V + + L +V
Sbjct: 602 AEREYVLRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLE-NAPLGHSV 660
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKLA--VPSNLVVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L P VI TG + ++G + VE Y
Sbjct: 661 IH------IQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGSLDRESVEHYFF 714
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 715 GVEARDYGSP 724
Score = 42.7 bits (99), Expect = 0.25, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y
Sbjct: 701 SGSLDRESVEHYFFGVEARDYGSPPLSASASVTVTVLDVNDNRPEFTTKEYHL------- 753
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
LN + + +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 754 RLNEDAA---VGTSVVSVTAVDRDANNAISYQITGGNTRNRFAISTQGGVGLVTLALPLD 810
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 811 YKQERYFKLVLTASD 825
Score = 42.4 bits (98), Expect = 0.27, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 26/177 (14%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 1068 ENSIVGSVVA--QITAVDPDEGPNAHIMYQIVEGNIPELFQM------------DIFSGE 1113
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L D+D E +Y +V+ AT +++A HV + +D+NDNSPV + F
Sbjct: 1114 LTALI-DLDYEARQEYVIVVQATSAPLVSRATVHVRL--VDQNDNSPVLNNFQILF---- 1166
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
++ SN S +IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1167 --NNYVSNRSDTFPSGTIGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1221
Score = 40.4 bits (93), Expect = 1.2, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 87/218 (39%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 971 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1018
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V Y L A D +G+ T V++ V+ D NDN+PVF + + V + NS V
Sbjct: 1019 AVPVYELTAYAVD-RGVPPLRTPVSIQVIVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1072
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1073 G-----SVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1127
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 1128 YVIVVQATSAPLVSRATVHVRLVDQNDNSPVLNNFQIL 1165
Score = 38.1 bits (87), Expect = 5.0, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKV 114
++ SG + + + +D E+ Y+L ITA D KA+T +V V V D NDN+P F
Sbjct: 897 DADSGAITLQA-PLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVTSH 955
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
Y +V + F+S+ +SATD D
Sbjct: 956 YTGLVSE----------DAPPFTSVLQISATDRDA 980
>gi|410948477|ref|XP_003980965.1| PREDICTED: protocadherin beta-17-like [Felis catus]
Length = 765
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 93/199 (46%), Gaps = 37/199 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT TD+ K + ++TV V D NDN+P FSQ Y V +
Sbjct: 406 LVTERALDRESQAEYNITITVTDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRE 465
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H IGSVSATD D +V Y L P++ LV I G+
Sbjct: 466 ----NNSPALH------IGSVSATDRDSGANAQVTYSLLPPADPQLPLASLVSINADNGQ 515
Query: 172 LLLTGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ--- 220
L S D E +E V A D SP+ ++ +V + N+P VL Q
Sbjct: 516 LFALR---SLDYEALRAFEFGVRAADRGSPALSSQARVRVLVLDDNDNAPFVLYPPQNGS 572
Query: 221 --LLQMIDRKSEAPHRIEK 237
+++ R +EA + + K
Sbjct: 573 APCTELVPRAAEAGYLVTK 591
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 28/173 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ + H F L N ++ + LV +DREE ++ L +TA D
Sbjct: 173 YTISTNSRFHLFTL---------NHSDGRRYPELVLDKALDREEQSELRLTLTALDGGSP 223
Query: 90 NKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ T V + VLD NDN+P F+Q +Y V + NS V S + +V ATD D
Sbjct: 224 PRTGTAQVLIVVLDINDNAPEFAQLLYEVQVPE-----NSPVG-----SLVITVFATDLD 273
Query: 149 G---DKVAYKLAVPSNLVV----IVPQTGELLLTGDPPSDDV-EYELTVEAHD 193
+++Y SN V+ I TGE+ L +++ Y L +EA D
Sbjct: 274 AGTYGELSYSFFQSSNQVIQAFEINAVTGEIRLKKTLDFEEIRSYRLEIEASD 326
>gi|395504758|ref|XP_003756714.1| PREDICTED: protocadherin beta-16-like [Sarcophilus harrisii]
Length = 792
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 76/149 (51%), Gaps = 24/149 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +DRE V+ YS++ITA D ++ ET VTV +LD NDN P F+Q Y V
Sbjct: 404 LVTDAALDRERVSNYSIMITAVDSGSPSLSTRET-VTVQILDINDNLPRFNQSSYTMYVT 462
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKL-------AVPSNLVVIVPQTG 170
+ S F IG++SATD+D KV Y + S + I + G
Sbjct: 463 ENNS----------PFLMIGALSATDSDSGQNAKVTYSIWPENNNSPFSSPFISINSENG 512
Query: 171 ELLLTGDPPSDDV-EYELTVEAHDLQSPS 198
++ + +++ ++++TV+A D +PS
Sbjct: 513 QVYILKTLDYEEIKDFKVTVQASDSGTPS 541
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 61/126 (48%), Gaps = 21/126 (16%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ L Y++T N+ F L H S SK LL+ +DREE + ++TA
Sbjct: 164 NALQNYTLTPSNE--PFVL-----HTREQSDGSKYPELLLVKA-LDREEQPELEFILTAV 215
Query: 85 DVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
D GI V V VLD NDN+PVFSQ +Y+ V + NS + S + +V
Sbjct: 216 D-GGIPPTSGTAKVRVIVLDANDNAPVFSQSLYQATVAE-----NSPIG-----SEVTTV 264
Query: 143 SATDAD 148
SA D+D
Sbjct: 265 SAVDSD 270
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 122/308 (39%), Gaps = 57/308 (18%)
Query: 28 VRYSITQ--GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
V YS +Q G + F + + T EIR S +D E +Y L + ATD
Sbjct: 277 VTYSFSQNAGKGHRAFQIDS-LTGEIR------------VSKPLDFEMTEKYELSVRATD 323
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G++ + V V+V D NDN P V L + L + S ++ SV
Sbjct: 324 GGGLS-SHCKVLVEVEDVNDNPP-------EVTVTSLSTLLPED-SLPGTVVALFSVRDK 374
Query: 146 DADGDKVAYKLAVPSNLVVIVPQ--TGELLLTGDPPSDD---VEYELTVEAHDLQSPSRY 200
D+ GD ++P ++ I+ + L D D Y + + A D SPS
Sbjct: 375 DS-GDHGRASCSIPDDIPFILKPIFSNYYELVTDAALDRERVSNYSIMITAVDSGSPSLS 433
Query: 201 AREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRI---DFSETDG 257
RE V Q+L + D VT P I +++D
Sbjct: 434 TRETVTV------------QILDINDNLPRFNQSSYTMYVTENNSPFLMIGALSATDSDS 481
Query: 258 EMEGRIVFALEKETEREKFKIRDENPWITVD-ENGDVRVKKRWDFEELGPEKTIDFWVTI 316
++ +++ E F +P+I+++ ENG V + K D+EE+ DF VT+
Sbjct: 482 GQNAKVTYSIWPENNNSPFS----SPFISINSENGQVYILKTLDYEEIK-----DFKVTV 532
Query: 317 NNQATNGG 324
QA++ G
Sbjct: 533 --QASDSG 538
>gi|403256584|ref|XP_003920949.1| PREDICTED: protocadherin beta-8-like [Saimiri boliviensis
boliviensis]
Length = 1136
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 13/114 (11%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAET 94
N T ++++ E++ S E+ LVT+G +DRE A+Y++ IT TD+ K E
Sbjct: 969 NGKMTCSIQDDVPFELKPSVENF--YRLVTAGALDRETRAEYNITITVTDLGTPRLKTEY 1026
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
++TV V D NDN+P F+Q Y V + NS H IGSVSATD D
Sbjct: 1027 NITVLVSDVNDNAPDFTQTSYTLFVRE----NNSPALH------IGSVSATDRD 1070
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 11/86 (12%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ ITATD+ K E +TV + D NDN+P F+Q Y V
Sbjct: 400 MLLTEGPLDREIRAEYNITITATDLGTPRLKTEHGITVLISDVNDNAPAFTQTSYTLFVR 459
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATD 146
+ NS H IGSVSATD
Sbjct: 460 E----NNSPALH------IGSVSATD 475
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVY 115
LV ++DREE A+ L +TA D ++ T + + VLD NDN+PVF+Q +Y
Sbjct: 785 LVLDTELDREEQAELRLTLTALDGGSPPRSGTAQILILVLDANDNAPVFAQALY 838
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 52 RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVF 110
+N +E + LV +DREE ++ L + A D + T V +++LD NDN+P F
Sbjct: 181 QNGSEGRKYPELVLDKALDREEQSELRLTLMAVDGGAPPRTGTALVLIEILDINDNAPEF 240
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
Q +Y+ V + NS + S + +VSA D D
Sbjct: 241 VQPLYQVQVSE-----NSPLE-----SLVATVSARDLD 268
>gi|390470196|ref|XP_002807360.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Callithrix jacchus]
Length = 3297
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 75/154 (48%), Gaps = 23/154 (14%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+G +D E+ +Y L + A D G ++ ++TV V D NDN+P FSQ +Y+ ++
Sbjct: 2333 TGPLDFEQCDRYQLQLLAHD--GPHEGYANLTVLVEDVNDNAPAFSQSLYQVML------ 2384
Query: 126 LNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELL------LTG 176
+ + S+I SVSATD D ++Y LA P++ + P G L G
Sbjct: 2385 ----LENTPPGSAILSVSATDRDSGANGHISYHLASPADGFSVDPNNGTLFTIVETVALG 2440
Query: 177 DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQ 210
S V ++ +EA D +P R AR V LQ
Sbjct: 2441 HEGSGAV--DVVLEARDHGAPGRAARATVHVQLQ 2472
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 25/131 (19%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH L+ ++++ G+ + F L + SG L + +D E A++ LV+ A
Sbjct: 2632 PHGLLHFTVSSGDPSGLFEL------------DESSGTLRLAHA-LDCETQARHQLVVQA 2678
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G + A VT++V D ND+ P F + L +SL N +++ ++
Sbjct: 2679 ADPAGAHFALAPVTIEVQDVNDHGPAFPLNL-------LSTSLAENQPPGTLVTTLHAI- 2730
Query: 144 ATDADGDKVAY 154
DGD A+
Sbjct: 2731 ----DGDAGAF 2737
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 98/250 (39%), Gaps = 35/250 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVG 120
L T+ +DRE+ + Y+ ++A D T V+V ++ D ND++P F R +
Sbjct: 1910 LRTAAALDREQCSSYTFSVSAVDGAAAGPLSTTVSVTIMVRDVNDHAPTFPTSPLRLRMP 1969
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA-VPSNLVVIVPQTGELLLTG 176
S ++ + ++ A D D + Y+LA P + TGE+ +
Sbjct: 1970 RPGPSFSTPT------LPLATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVAR 2023
Query: 177 DP----PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
P P D V L V A DL P+R A V LQ + E+ + SEA
Sbjct: 2024 SPVALGPRDRV---LFVVATDLGRPARSATGVIIVGLQGEA-----ERGPRFPRASSEAM 2075
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGD 292
R T V P + G G I +++ E+ F I+ IT
Sbjct: 2076 IRENAPPGTLIVSPR-----AVHAGGSNGPITYSILSGNEKGTFSIQPSTGAIT------ 2124
Query: 293 VRVKKRWDFE 302
VR + DFE
Sbjct: 2125 VRSAEGLDFE 2134
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 505 EGGEGH-FAL----------STQDSVIYLVCVARRLDREERDAYNLRVTATDSGSPPLRA 553
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + V D NDN+P F +++YR
Sbjct: 554 EAAFVLHVTDVNDNAPAFDRQLYR 577
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 53/119 (44%), Gaps = 10/119 (8%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ TF L E R + LV +G++DRE + Y L + A D
Sbjct: 279 YALSGDGAGETFRL------ETRPGPDGAPVPELVVTGELDRENRSHYMLQLEAYDGGSP 332
Query: 90 -NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+A+ + V +LD ND++P F+Q Y +V + SL + F+S A A
Sbjct: 333 PRRAQALLDVTLLDINDHAPAFNQSRYHAVVSE---SLAPGSPVLQVFASDADAGANGA 388
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINKAETHV-TVDVLDENDNSPVFSQKVYRFIV 119
G +DRE+ A++ L + A+D ++ T V TV V D ND +P F Q+ Y ++
Sbjct: 1603 CGPLDREQRAEHVLTVMASDHGSPPRSATQVLTVSVADVNDEAPTFQQQEYSVLL 1657
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 80/202 (39%), Gaps = 26/202 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V + P+ + YS+ Q +++ +P T E
Sbjct: 1215 ENQPPGTSVGR--VFATDRDSGPNGRLTYSLQQLSEDSKAFRIHPQTGE----------- 1261
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
L T +DRE+ + Y L++ D +++ T V V VLD NDNSP F Q G
Sbjct: 1262 -LTTLQTLDREQQSSYQLLVQVQDGGSPSRSTTGTVHVAVLDLNDNSPTFLQ-ASGAAGG 1319
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPS-NLVVIVPQTGELLLTGDPP 179
L + V +++ + + + + Y L P+ + +G
Sbjct: 1320 GLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPAQSFSXXXXXSG--------- 1370
Query: 180 SDDVEYELTVEAHDLQSPSRYA 201
++ Y LT+ AHD SP R A
Sbjct: 1371 AERPHYVLTLSAHDQGSPPRSA 1392
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVIT 82
H V YSI GN F L+ P E L LV +D E + QY+L +
Sbjct: 2514 HAAVDYSIISGNRGQVFQLE-PRLAEAGEGAGPGPRALGCLVLLESLDFESLTQYNLTVA 2572
Query: 83 ATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
A D + + VTV VLD NDN PVF++ YR V
Sbjct: 2573 AADRGQPPRSSVVPVTVTVLDVNDNPPVFTRASYRVAV 2610
>gi|261289565|ref|XP_002604759.1| hypothetical protein BRAFLDRAFT_222389 [Branchiostoma floridae]
gi|229290087|gb|EEN60769.1| hypothetical protein BRAFLDRAFT_222389 [Branchiostoma floridae]
Length = 128
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRF 117
+G L VTSG +DRE Y L I A D +K T +T+ +LD NDN+P+FSQ VY+F
Sbjct: 48 TGELKVTSGHLDRETTETYELTIFARDRGSPSKTGTQSMTITILDCNDNAPIFSQNVYKF 107
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
S+ +V ++I ++SATD D
Sbjct: 108 -------SVREDVGVG---TTIATISATDGD 128
>gi|302564845|ref|NP_001180833.1| protocadherin beta-8 precursor [Macaca mulatta]
Length = 801
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 71/149 (47%), Gaps = 24/149 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVG 120
L+T +DRE A+Y++ IT TD+ G + TH+ + VL D NDN P F+Q Y V
Sbjct: 404 LLTEKPLDRESRAEYNVTITVTDL-GTPRLTTHLNMTVLVSDVNDNVPAFTQISYTLFVR 462
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P S+LV I G
Sbjct: 463 E----NNSPALH------IGSVSATDRDSSTNAQVTYSLLPPQDQHLPLSSLVSINADNG 512
Query: 171 ELLLTGDPPSDDV-EYELTVEAHDLQSPS 198
L + + E+E V A D SP+
Sbjct: 513 HLFALRSLDYEALQEFEFRVRAADRGSPA 541
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE A+ L +TA D ++ T V ++V+D NDN+P F Q YR + +
Sbjct: 195 LVLDKALDREAEAELRLTLTALDRGSPPRSGTAQVYIEVVDVNDNAPEFEQPFYRVQISE 254
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVV----IVPQTGELLL 174
+S + + VSATD D +++Y L S+ + + TGE+ L
Sbjct: 255 -----DSPIGFL-----VVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDSLTGEIEL 304
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+ ++ YE+ +EA D
Sbjct: 305 KKQLDFEKLQSYEVNIEARD 324
>gi|348582908|ref|XP_003477218.1| PREDICTED: protocadherin beta-15-like [Cavia porcellus]
Length = 653
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 51/88 (57%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVG 120
LVT G +DRE AQY++ IT TD+ G + +T T+ VL D NDN+P F+Q Y V
Sbjct: 402 LVTDGPLDRETRAQYNITITVTDL-GTPRLKTQHTITVLVSDVNDNAPTFTQSSYTLSVP 460
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ NS H IGSVSATD+D
Sbjct: 461 E----NNSPALH------IGSVSATDSD 478
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 32/203 (15%)
Query: 1 MENSKSGTGVKGLPILVASSHK-HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKS 59
+ENS+ GT P+ +A + L +Y+I+ + H RN +E K
Sbjct: 142 LENSQPGTV---FPLQLAEDLDVGSNGLQKYTISPNSHFHV---------HTRNHSEGKK 189
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFI 118
LV +DREE A+Y L +TA D ++ V + ++D NDN+P F Y
Sbjct: 190 FPDLVQDKPLDREEQAEYRLTLTALDGGSPPRSGSVMVRILIMDVNDNAPEFVHTPYEVQ 249
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLV----VIVPQTGE 171
V + LN S I SV A D D V+Y L PS+ + I TGE
Sbjct: 250 VLE-NCPLN---------SPILSVLARDMDAGNFGSVSYGLFQPSDEIKQTFSINKATGE 299
Query: 172 LLLTGDPPSDDVE-YELTVEAHD 193
+ L + ++ Y++ +EA D
Sbjct: 300 IRLQKKLDFEKIKSYDVEIEATD 322
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 78/177 (44%), Gaps = 31/177 (17%)
Query: 28 VRYSITQGND--NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
V Y + Q +D TF++ N T EIR + +D E++ Y + I ATD
Sbjct: 276 VSYGLFQPSDEIKQTFSI-NKATGEIRLQKK------------LDFEKIKSYDVEIEATD 322
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G++ T V ++V+D NDN+P S + L SS+ N + SI V
Sbjct: 323 GGGLSGKGT-VVIEVVDVNDNAPELS-------ITSLTSSIPENAP--ETVVSIFRVGDR 372
Query: 146 DADGDKVAYKLAVPSNLVVIVPQT--GELLLTGDPPSD---DVEYELTVEAHDLQSP 197
D+ GD ++P NL ++ T L D P D +Y +T+ DL +P
Sbjct: 373 DS-GDNGKMICSIPDNLPFVLKPTFLNFYTLVTDGPLDRETRAQYNITITVTDLGTP 428
>gi|73768710|gb|AAI03495.1| PCDHB9 protein, partial [Homo sapiens]
Length = 796
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 22/149 (14%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ IT TD+ K E +T+ V D NDN+P F+Q Y V
Sbjct: 401 ILMTEGALDRESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVR 460
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 461 E----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNG 510
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ ++ V A D SP+
Sbjct: 511 HLFALRSLDYEALQAFDFRVGASDRGSPA 539
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + SL +TA D +++ T + + VLD NDN+P F+Q +Y +
Sbjct: 193 LVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALY-----E 247
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVV----IVPQTGELLL 174
++ NS V S I VSA DAD +V+Y S ++ I P +GE+ L
Sbjct: 248 TQAPENSPVG-----SLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFL 302
>gi|390459357|ref|XP_003732285.1| PREDICTED: protocadherin beta-16 [Callithrix jacchus]
Length = 797
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 22/149 (14%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ IT TD+ K E +T+ V D NDN P F+Q Y V
Sbjct: 402 ILMTEGALDRESQAEYNITITVTDLGTPRLKTEHSITLQVSDINDNVPAFTQSSYTLFVR 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 462 E----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNG 511
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 512 HLFALRSLDYEALQAFEFRVGATDRGSPA 540
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 62/120 (51%), Gaps = 18/120 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV ++DREE Q L +TA D ++ T V ++V+D NDN+P F Q +Y+ + +
Sbjct: 194 LVLDKELDREEEHQLRLTLTALDGGSPPRSGTTQVRIEVVDINDNAPEFEQPIYKVQIPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP----SNLVVIVPQTGELLL 174
NS + S + +VSA D D K++Y L P S + + P+TGE+ L
Sbjct: 254 -----NSPLG-----SLVATVSARDLDSGANGKISYTLFQPSEDISKTLELNPRTGEIRL 303
>gi|61696132|ref|NP_001013428.1| protocadherin beta-4 precursor [Pan troglodytes]
gi|62510882|sp|Q5DRD0.1|PCDB4_PANTR RecName: Full=Protocadherin beta-4; Short=PCDH-beta-4; Flags:
Precursor
Length = 795
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 37 DNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETH 95
DN F LK PT K+ LVT +DRE A+Y++ IT TD+ K +
Sbjct: 386 DNLPFILK-PTL---------KNFYTLVTERPLDRETSAEYNITITVTDLGTPRLKTQQS 435
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KV 152
+TV V D NDN+P F+Q Y V + NS H IGSVSATD D +V
Sbjct: 436 ITVQVSDVNDNAPAFAQTSYTLFVRE----NNSPALH------IGSVSATDRDSGTNAQV 485
Query: 153 AYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
Y L P S+LV I G L + ++ +E V A D SP+
Sbjct: 486 TYSLLPPQDPHLPLSSLVSINADNGHLFALRSLDYEALQAFEFRVGASDRGSPA 539
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 1 MENSKSGTGVKGLPILVASSHK-HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKS 59
+ENS+ GT P+L+A + L +Y+I+ + H RN +E K
Sbjct: 142 LENSQPGTL---FPLLIAEDLDVGSNGLQKYTISPNSHFHILT---------RNHSEGKK 189
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVY 115
LV +DREE ++SL + A D ++ T V + ++D NDN+P F Y
Sbjct: 190 YPDLVQDKPLDREEQPEFSLTLVALDGGSPPRSGTVMVRILIMDINDNAPEFVHTPY 246
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 77/177 (43%), Gaps = 31/177 (17%)
Query: 28 VRYSITQGND--NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
V Y + Q +D TF++ N T EI + +D E++ Y + I ATD
Sbjct: 276 VSYGLFQASDEIKQTFSI-NEVTGEI------------LLKKKLDFEKIKSYHVEIEATD 322
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G++ T V ++V+D NDN P I+ L SS+ N + SI +
Sbjct: 323 GGGLSGKGT-VVIEVVDVNDNPP-------ELIISSLTSSIPENAP--ETVVSIFRIRDR 372
Query: 146 DADGDKVAYKLAVPSNLVVIVPQTGE--LLLTGDPPSD---DVEYELTVEAHDLQSP 197
D+ G+ ++P NL I+ T + L + P D EY +T+ DL +P
Sbjct: 373 DS-GENGKMICSIPDNLPFILKPTLKNFYTLVTERPLDRETSAEYNITITVTDLGTP 428
>gi|301753529|ref|XP_002912595.1| PREDICTED: protocadherin beta-11-like [Ailuropoda melanoleuca]
Length = 798
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 94/197 (47%), Gaps = 32/197 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L T G +DRE A+Y++ IT TD+ K + ++TV V D NDN+P FSQ Y V +
Sbjct: 403 LETEGMLDRESEAEYNITITVTDLGTPRLKTQHNLTVTVSDVNDNAPAFSQSSYTLRVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP--------SNLVVIVPQTG 170
NS H IGSVSATD D +V Y L +P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDAGANAQVTYSLLLPPHDPHLPLASLVSINADNG 512
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ----- 220
+L + ++ +E V A D SP+ ++ +V + N+P VL Q
Sbjct: 513 QLFALRALDYEALQAFEFGVRAADRGSPALSSQALVRVLVVDDNDNAPFVLYPLQNGSAP 572
Query: 221 LLQMIDRKSEAPHRIEK 237
+++ R +EA + + K
Sbjct: 573 CTELVPRAAEAGYLVTK 589
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +D EE ++ S ++TA D ++ T V V V+D NDNSP F Q Y +
Sbjct: 194 LVLDKPLDYEEQSELSFILTALDGGSPPRSGTASVRVVVVDINDNSPEFEQPFY-----E 248
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVV----IVPQTGELLL 174
+K+ NS + S I +VSA D D K ++Y + S + I ++GE+ L
Sbjct: 249 VKTPENSILG-----SIIVTVSARDLDSGKNGEISYSFSHASEDIRKTFEINQKSGEVSL 303
Query: 175 TGDPPSDDVE-YELTVEAHD 193
T + +E Y + ++A D
Sbjct: 304 TASMDFETIESYSIIIQATD 323
>gi|14195616|ref|NP_061992.2| protocadherin beta-9 precursor [Homo sapiens]
gi|13431372|sp|Q9Y5E1.2|PCDB9_HUMAN RecName: Full=Protocadherin beta-9; Short=PCDH-beta-9; AltName:
Full=Protocadherin-3H; Flags: Precursor
gi|11142065|gb|AAD43763.2|AF152502_1 protocadherin beta 9 [Homo sapiens]
gi|85662638|gb|AAI05641.1| Protocadherin beta 9 [Homo sapiens]
gi|119582378|gb|EAW61974.1| protocadherin beta 9 [Homo sapiens]
Length = 797
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 22/149 (14%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ IT TD+ K E +T+ V D NDN+P F+Q Y V
Sbjct: 402 ILMTEGALDRESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVR 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 462 E----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNG 511
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ ++ V A D SP+
Sbjct: 512 HLFALRSLDYEALQAFDFRVGASDRGSPA 540
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + SL +TA D +++ T + + VLD NDN+P F+Q +Y +
Sbjct: 194 LVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALY-----E 248
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVV----IVPQTGELLL 174
++ NS V S I VSA DAD +V+Y S ++ I P +GE+ L
Sbjct: 249 TQAPENSPVG-----SLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFL 303
>gi|332244501|ref|XP_003271412.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4-like [Nomascus
leucogenys]
Length = 4981
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 84/184 (45%), Gaps = 38/184 (20%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+ YSI +GN+ FA+ +S SG + +T G +D E YSLVI A D
Sbjct: 1244 LIHYSIIKGNEERQFAI------------DSTSGQVALT-GKLDYEATPAYSLVIQAVDS 1290
Query: 87 KGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVSA 144
I T + +D+LDENDN+P F KS+L +V + + SV+A
Sbjct: 1291 GTIPLNSTCTLNIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVTA 1339
Query: 145 TDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQ 195
TD+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1340 TDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQG 1396
Query: 196 SPSR 199
P R
Sbjct: 1397 RPPR 1400
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 35/193 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L++YSI+ GN+ FA+ S +G+L + +D E ++ + I+A D
Sbjct: 3123 LIKYSISSGNEEGIFAIN------------SSTGILTLAKA-LDYELCQKHEMTISAIDG 3169
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + VTV+V+D NDNSPVF Y V + + +++ ++AT
Sbjct: 3170 GWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTV----------LENAPSGTTVIHLNAT 3219
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
DAD +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 3220 DADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQG---FLDFETKQSYHLTVKAFNVPDE 3276
Query: 198 SRYAREPAQVWLQ 210
R + V L+
Sbjct: 3277 ERCSFATVNVQLK 3289
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V+YSI+ G+ + R ++SGV+ T +DREE Y L I ATD
Sbjct: 724 VKYSISAGDRS-------------RFQVNAQSGVI-STRMALDREEKTAYQLQIVATDGG 769
Query: 88 GINKA-ETHVTVDVLDENDNSPVFSQKVYRFI----------VGDLKSS---LNSNVSHW 133
+ + VT+ VLD DN PVFSQ Y F+ VG + +S LNSN+S+
Sbjct: 770 NLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFENVALGYHVGSVSASTMDLNSNISYL 829
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ Y+L + ATD KG + T V V VLD NDN+P+F+Q +Y+
Sbjct: 2109 TGELDREEVSNYTLTVVATD-KGQPSLSSSTEVVVMVLDINDNNPIFAQALYK 2160
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 99/258 (38%), Gaps = 44/258 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ T L T+ IDREE + Y L + A+
Sbjct: 826 ISYLITTGDQKGMFAINQVTGQ-------------LTTANVIDREEQSFYQLKVVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V D NDNSP F Q + S+N V +W+ SI A D
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAI---------ESVNV-VENWQAGHSIFQAKAVDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYARE 203
D V Y L P NL I + G + L G Y++ + A D+ P +
Sbjct: 921 DEGVNGMVLYSLKQNPKNLFAINEKNGTISLLGPLDVHAGSYQIEILASDMGVPQLSSSV 980
Query: 204 PAQVWLQ---FNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEME 260
V++ NSPV +QL + P + R ++ S+ D
Sbjct: 981 ILTVYVHDVNDNSPVF--DQLSYEVTLSESEP--VNSRFF--------KVQASDKDSGAN 1028
Query: 261 GRIVFALEKETEREKFKI 278
G I + + + + F I
Sbjct: 1029 GEIAYTIAEGNTGDAFGI 1046
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 83/188 (44%), Gaps = 26/188 (13%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I +GN+ F L N + + + LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIIRGNEAGRFRLD-----ITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KGE 227
Query: 90 NKAETH--VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
K + V V V D NDN PVF Y+ G + ++ SS+ V+A DA
Sbjct: 228 PKRRGYLQVNVTVQDINDNPPVFGSSHYQ--AGVTEDAVVG--------SSVLQVAAADA 277
Query: 148 D---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSPSRYA 201
D + Y+L + P+TG ++T P D +Y LTV+A D PS
Sbjct: 278 DEGTNADIRYRLQDEGTPFQMDPETG--IITVREPLDFEARRQYSLTVQAMDRGVPSLTG 335
Query: 202 REPAQVWL 209
R A + L
Sbjct: 336 RAEALIQL 343
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 31/176 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN ++F++ N T EIR+ +DRE+V+ Y L I +
Sbjct: 2699 PNGQLDYEIVNGNMENSFSI-NHATGEIRSVRP------------LDREKVSHYVLTIKS 2745
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D KG T V V ++LDENDN+P FSQ ++ V + NS + + ++
Sbjct: 2746 SD-KGSPSQSTSVKVMINILDENDNAPRFSQ-IFSAHVPE-----NSPLGY-----TVTR 2793
Query: 142 VSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ +D D A Y + S I P TG+++++ +D + Y + V AHD
Sbjct: 2794 VTTSDEDIGINAISRYSIMDTSLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2849
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1754 GDGSKIMQLTAMDADEGANALVTYTIISGADD-SFRI------------DPESGDLIATR 1800
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND++P FS+ VY F
Sbjct: 1801 -RLDRERRSKYSLLVRADD--GLQSSDMRINITVSDVNDHTPKFSRPVYSF 1848
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 19/91 (20%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGD 121
L T +DREE A YSL++ ATD+ ++ + V +LD NDNSPVF Y
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQY------ 694
Query: 122 LKSSLNSNVSHWKK----FSSIGSVSATDAD 148
+H K+ S I +VSATD D
Sbjct: 695 --------FAHIKENEPGGSYITTVSATDPD 717
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + + A + + VRY I GN N F + +S +G
Sbjct: 2165 ENTLTGTDI--IQVFAADGDEGTNGQVRYGIVNGNTNQEFRI------------DSVTGA 2210
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
+ V +DRE+ Y L + ATD + +T V++ +LD ND P+F Y
Sbjct: 2211 ITVAK-PLDREKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPY 2264
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 35/177 (19%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKV 114
K+G + V SG +DRE+ + SL + A + ++G + E V V VLD ND PVF+ +
Sbjct: 3351 KTGQIYV-SGILDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND-PPVFTLNI 3408
Query: 115 YRFIVGD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLV 163
Y + + S+ +S+ + W +FS IGS + A
Sbjct: 3409 YSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGA---------------F 3453
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
I PQTG++ +T + + + Y L+V A D +PS V L+ N P+L
Sbjct: 3454 SINPQTGQITVTAELDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 118/300 (39%), Gaps = 57/300 (19%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN++ GT V L + A S + + I GN+ F E+++S +
Sbjct: 369 ENAQVGTVVALLTVTDADS-PAANGNISVQILGGNEQRHF--------EVQSSKVPNLSL 419
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGI--------NKAETHVTVDVLDENDNSPVFSQK 113
+ V S +DRE + Y+L ++ +D G + + + V D ND+ PVFSQ+
Sbjct: 420 IKVASA-LDRERIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPVFSQQ 478
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVI-VPQT 169
VYR + + S + +SATD D + Y + + L + +
Sbjct: 479 VYRVNLSE----------EAPPGSYVSGISATDGDSGLNANLRYSIVSGNGLGWFHISEH 528
Query: 170 GELLLTGDPPSDDVEYE----LTVEAHD--LQSPSRYAREPAQVWLQFNSPVLQDEQLLQ 223
L+ TG D E L + A D + YAR LL
Sbjct: 529 SGLVTTGSSGGLDRELASQIVLNISARDQGVHPKVSYARLVV--------------TLLD 574
Query: 224 MIDRKS--EAPHRIEKRRVTRAVRPTKRIDFSETDGEM--EGRIVFAL-EKETEREKFKI 278
+ D K P + V A T+ + TDG++ G + F+L E ET+R F++
Sbjct: 575 VNDEKPLFSQPEGYDVSVVENAPTGTELLMLRATDGDLGDNGTVRFSLQEAETDRRSFRL 634
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 74/175 (42%), Gaps = 31/175 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y + GN+++ F L S SG L VT +DRE + L+ITATD
Sbjct: 2295 LSYVLFGGNEDNAFTL-------------SASGELGVTQ-SLDRETKEHFVLMITATD-S 2339
Query: 88 GINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G T++V+ D NDN P F+ K Y + + + + V+A+
Sbjct: 2340 GSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPE----------DAPTGTDVLLVNAS 2389
Query: 146 DADGDKVAYKLAVPSN-LVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSP 197
DAD A + N I P TG+++ + D + D Y L V D SP
Sbjct: 2390 DADASTNAVIRIIGGNSQFTINPSTGQIITSALLDRETKD-NYTLVVVCSDAGSP 2443
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 103/249 (41%), Gaps = 44/249 (17%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE----THVTVDVLDENDNSPVF 110
T K+G+L V +DRE + Y+LV+ D+ I + V++ +LD NDN P F
Sbjct: 1993 TVDKNGILKVLKA-LDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTF 2051
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV----SATDADG---DKVAYKLAVP-SNL 162
L+ +++ + + I +V ATD D + Y L P N
Sbjct: 2052 ---------------LSPKLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNK 2096
Query: 163 VVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQD 218
I GE+ LTG+ ++V Y LTV A D PS + V + N+P+
Sbjct: 2097 FSIGTIDGEVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIF-- 2154
Query: 219 EQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKI 278
++A +++E T ++ ++ D G++ + + ++F+I
Sbjct: 2155 ----------AQALYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVNGNTNQEFRI 2204
Query: 279 RDENPWITV 287
ITV
Sbjct: 2205 DSVTGAITV 2213
>gi|59936685|gb|AAX12106.1| cadherin 99C [Drosophila melanogaster]
gi|59936706|gb|AAX12107.1| cadherin 99C [Drosophila melanogaster]
Length = 1706
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 26/169 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI GND FA+ +SGV++V +DRE + +Y L++ A D
Sbjct: 636 VVYSIISGNDLRQFAVG------------QESGVIIVIR-KLDRESLTRYQLILKAEDTG 682
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G++ + T V + V D ND +P F ++ V K +S+G V ATDA
Sbjct: 683 GLSSSAT-VNIKVTDINDKNPEFEASTLPYVF---------QVEEGKAQASVGVVHATDA 732
Query: 148 D-GDKVAYKLAVPSNLVVIVPQT-GELLLTGDPPSDDV-EYELTVEAHD 193
D G ++P+++ + T GE+L + + + EY+ V A D
Sbjct: 733 DEGINAEITYSIPTDIPFTINATSGEILTAKELDYEQLNEYKFVVTAKD 781
>gi|307190373|gb|EFN74432.1| Cadherin-related tumor suppressor [Camponotus floridanus]
Length = 1810
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 92/223 (41%), Gaps = 31/223 (13%)
Query: 4 SKSGTGVKGLPILV--ASSHKHPHQ--LVRYSITQGNDNHTFALKNPTTHEIRNSTESKS 59
S S + V G +L+ A+ P L Y I GN + F L E+ +T S
Sbjct: 184 SFSESAVAGTKLLLDAATDRDTPENGVLDDYFIVDGNTDGKFRL------EVTGNTGETS 237
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ L T+G +DRE+V YSL I D + V V VLD NDN PVF Q
Sbjct: 238 YLYLETTGKLDREQVEFYSLNICVRDRGRPPRLGYLLVNVTVLDVNDNPPVFQQS----- 292
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGEL----LL 174
D SLN + K ++ + D K+ Y L I P+ G + LL
Sbjct: 293 --DYVVSLNESAPVGTKVLTVHATDKDSEDNSKLTYYLPDDERKFTIDPEIGTITTAELL 350
Query: 175 TGDPPSDD-----VEYELTVEAHDLQSPSRYAREPAQVWLQFN 212
+ DPP D +TV A D SP R+ + ++ N
Sbjct: 351 SCDPPKDCKGTCIKTCVITVFARDNGSP----RQDGRTYVTLN 389
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 81/181 (44%), Gaps = 36/181 (19%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
L+ +G +DREEV Y+L I A+D KGI ++ + V D ND+ PVF Q Y ++
Sbjct: 466 LVKINGRLDREEVPTYNLTIVASD-KGIPSRSVTVYLGIHVNDVNDHEPVFQQSEYSAVL 524
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNL--VVIVPQTGELLL 174
+L S + S+SATDAD +V Y L +NL I TG L+
Sbjct: 525 SELA----------PNGSFVASISATDADSGLNAQVYYNLESGNNLGWFAIDKNTG-LVT 573
Query: 175 TGDPPSDDVE--YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
T +V+ EL V A D ++YA +V ++D EAP
Sbjct: 574 TVATLDREVQGSIELLVYAQDGGPNTKYANTHLKV---------------TILDENDEAP 618
Query: 233 H 233
H
Sbjct: 619 H 619
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 112/281 (39%), Gaps = 64/281 (22%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYS+T GN +F + ++N +DREE Y+L +TA D
Sbjct: 1080 IRYSVTDGNVESSFGIFPDGQLYVKNM--------------LDREERDYYALEVTAFDQG 1125
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKF----SSIGSV 142
+++ V + ++DENDN+P F+ + F H ++ + +G +
Sbjct: 1126 NPSRSSMVPVVMHIIDENDNAPEFTNSSFSF--------------HLRENEPPDTFVGKL 1171
Query: 143 SATDADGDKVA---YKLAVPSNLVVIVPQTG----------ELLLTGDPPSDDVEYELTV 189
SATD D + A + L VI P+ G ELL+T S +T+
Sbjct: 1172 SATDRDVGRNADLIFSLPASQQDFVIDPRNGFVKSLRVFDRELLVTNTGDS-----YVTL 1226
Query: 190 EAHDLQSPSRYAREPAQVWLQF---NSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRP 246
EA + R+ +V + N V Q ++L P+R++
Sbjct: 1227 EATVTDNGVNRLRDRVKVTIYITDVNDNVPQFQRL----------PYRVQVSEGAVIGTQ 1276
Query: 247 TKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
R+ ++ D + G + ++LE + F I + I++
Sbjct: 1277 LLRVYTTDADKGLNGDVFYSLEDGNQHGHFIIDEATGQISL 1317
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 104/258 (40%), Gaps = 40/258 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y++ GN+ FA+ K+ L+ T +DRE L++ A D
Sbjct: 550 VYYNLESGNNLGWFAID-------------KNTGLVTTVATLDREVQGSIELLVYAQD-G 595
Query: 88 GINK--AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G N A TH+ V +LDEND +P FS+ V ++ +L+ N +++ ++
Sbjct: 596 GPNTKYANTHLKVTILDENDEAPHFSKNV-------VQITLSENTPPNSLIATLAAIDND 648
Query: 146 DADGDKVAYKLAVPSNLVVIVPQTGEL-LLTGDPPSDD-------VEYELTVEAHDLQSP 197
V Y S + P+T L LTG + EY + + A D +P
Sbjct: 649 QGTNGSVVYSFH--SCVSRDYPKTFALDALTGQLTTKIALDRETVAEYRILIIAKDQGTP 706
Query: 198 SRYAREPAQVWLQ---FNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA-VRPTKRIDFS 253
+ + + L+ NSPV + L I S A I K T A R +I +
Sbjct: 707 VQSSTATVILTLEDVNDNSPVFYPWKYLMPISEDSPAGTIIGKVTATDADARENAQIKYI 766
Query: 254 ETDGEMEGRIVFALEKET 271
G G +F +++ T
Sbjct: 767 LESG---GEGLFVIDERT 781
>gi|444713173|gb|ELW54081.1| Protocadherin beta-2 [Tupaia chinensis]
Length = 721
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 77/162 (47%), Gaps = 28/162 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT TD+ H +TV V D NDN+P F+Q Y +V +
Sbjct: 405 LVTERPLDRESQAEYNITITVTDLGTPRLTTEHSITVLVSDVNDNAPAFTQASYTLLVRE 464
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IG++SATDAD +V Y L P ++LV I G+
Sbjct: 465 ----NNSPALH------IGTISATDADAGTNAQVTYSLLPPHDPQLALASLVSINADNGQ 514
Query: 172 LLLTGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWL 209
L S D E +E V A D SP+ ++ +V +
Sbjct: 515 LFALR---SLDYEALRAFEFGVRAADRGSPALSSQALVRVLV 553
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 22/171 (12%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVL---LVTSGDIDREEVAQYSLVITATDVKGINK 91
GN++ +P +H N +S G + LV +DREE + SL +TA D +
Sbjct: 165 GNNSLQNYTISPNSHFHLNLQDSSDGTVVPQLVLDKALDREEQPEISLTLTALDGGTPPR 224
Query: 92 AETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-- 148
+ + V ++VLD NDN+P F++ +Y D++ +S + + +VSA D D
Sbjct: 225 SGSALVRIEVLDINDNAPEFAKPLY-----DMQVREDSPIGFL-----VTTVSARDLDIG 274
Query: 149 -GDKVAYKLAVPSNLV----VIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
+++Y + S + I ++GELLLT + ++ Y +T++A D
Sbjct: 275 AYGQISYVFSQASEDIRKTFRIDTKSGELLLTQKLDFESIQSYTVTIQAID 325
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 35 GNDNHTFALKNPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE 93
G N+T A N H + R+ + + LV +DRE+ + SL +TA D ++
Sbjct: 628 GLQNYTLA-PNSYFHVVTRSRRDGRKYPELVLDKALDREQQPELSLTLTALDGGSPPRSG 686
Query: 94 T-HVTVDVLDENDNSPVFSQKVY 115
T + + VLD NDN+P F Q +Y
Sbjct: 687 TAQINILVLDINDNAPEFEQTLY 709
>gi|71680797|gb|AAI00673.1| Protocadherin beta 9 [Homo sapiens]
gi|85662612|gb|AAI05637.1| Protocadherin beta 9 [Homo sapiens]
Length = 797
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 22/149 (14%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ IT TD+ K E +T+ V D NDN+P F+Q Y V
Sbjct: 402 ILMTEGALDRESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVR 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 462 E----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNG 511
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ ++ V A D SP+
Sbjct: 512 HLFALRSLDYEALQAFDFRVGASDRGSPA 540
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 18/120 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + SL +TA D +++ T + + VLD NDN P F+Q +Y +
Sbjct: 194 LVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNVPQFAQALY-----E 248
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVV----IVPQTGELLL 174
++ NS V S I VSA DAD +V+Y S ++ I P +GE+ L
Sbjct: 249 TQAPENSPVG-----SLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFL 303
>gi|350418958|ref|XP_003492024.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-related tumor
suppressor-like [Bombus impatiens]
Length = 4964
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 69/143 (48%), Gaps = 24/143 (16%)
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
G +DREE +Y L + A D G +A T +T+ + D+NDN P F ++ Y F +L+
Sbjct: 2849 GHLDREEQDEYLLKLVAAD--GAWQAATALTITIQDQNDNPPEFDEESYHFHFPELQPP- 2905
Query: 127 NSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELLL-------- 174
V+H +G V+A D D ++Y L PS+L + P TG++
Sbjct: 2906 ---VAH------VGQVTAIDRDKQGPNSVISYSLLQPSDLFTVDPATGDVFSKKTLKYKH 2956
Query: 175 TGDPPSDDVEYELTVEAHDLQSP 197
T P S + Y LTV A D P
Sbjct: 2957 THRPSSPENLYSLTVVATDNGKP 2979
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 100/245 (40%), Gaps = 43/245 (17%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE +Y L + A D G+ + +T+ V D NDN+P F Y F V +
Sbjct: 1803 LDRETREKYVLKVRADD--GLQHTDIALTIQVTDTNDNAPTFQSTAYSFDVPE------- 1853
Query: 129 NVSHWKKFSSIGSVSATDADGD----KVAYKLAV--PSNLVVIVPQTGELLLTGDPPSDD 182
+ + S IG V ATDAD + +++Y L +++ + P TG LT +
Sbjct: 1854 ---NVPRGSRIGQVVATDADANGPNSQLSYTLISDWANDVFSLNPSTGVFTLTASLDYEQ 1910
Query: 183 VE-YELTVEAHDLQSPSRYAREPAQ---VWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKR 238
V+ Y L V+A D P+ + V L N+P+ + PH +
Sbjct: 1911 VQHYILVVQATDGGIPALSSTVTVYCNVVDLNDNAPIFE------------AGPHAADIV 1958
Query: 239 RVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKR 298
T P + + D GR+++A+ DEN V NG + +K
Sbjct: 1959 ENTTIGTPILSVAAQDLDSGDNGRVIYAVAGG---------DENGDFGVAPNGTLFTRKL 2009
Query: 299 WDFEE 303
D E+
Sbjct: 2010 LDREQ 2014
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 16/102 (15%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
LL SG +DRE + Y+L +TA D +G + T VTV VLDENDNSPVF + Y V
Sbjct: 2108 LLRVSGSLDRELRSNYTLEVTAKD-RGEPPRSSSTAVTVTVLDENDNSPVFDPRQYSATV 2166
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV 158
+ N+++ +S+ VSA D D +V Y +A+
Sbjct: 2167 AE-----NASIG-----ASVLQVSAMDRDEGANGRVRYGIAM 2198
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 58/117 (49%), Gaps = 21/117 (17%)
Query: 42 ALKNPTTHEIRNSTE--------SKSGVLLVTSGDIDREEVAQYSLVITATDVKGI--NK 91
L TT EIR E + S ++ +G +DREE+ +Y+L + ATD KG
Sbjct: 363 GLNGETTVEIRAGNELGHFRLDNTPSFDIVRVNGRLDREEIPKYNLTVVATD-KGTPPRS 421
Query: 92 AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
A ++ + V D ND+ PVF Q Y ++ +L + S + S+SATDAD
Sbjct: 422 ATAYLVIHVNDVNDHEPVFQQSEYSAVLSELSPT----------GSFVASISATDAD 468
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 61/144 (42%), Gaps = 13/144 (9%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-VKG 88
Y I GN + F L+ N T S + L T+G +DRE+V YSL + A D +
Sbjct: 136 YFIVNGNTDGKFRLE-----VTGNPTGETSYLHLETTGKLDREQVEFYSLNVCARDRGRP 190
Query: 89 INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
V V VLD NDN P+F Q D +LN + K ++ + D
Sbjct: 191 PRLGYLLVNVTVLDVNDNPPIFQQS-------DYVVALNESAPVGTKVLTVHATDKDSED 243
Query: 149 GDKVAYKLAVPSNLVVIVPQTGEL 172
K+ Y L I P+TG +
Sbjct: 244 NSKLTYYLPDTERQFTIDPETGTI 267
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 82/183 (44%), Gaps = 36/183 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVI----TA 83
VRY I G+DN F + S+ G ++ + +++ E ++Y L I A
Sbjct: 2192 VRYGIAMGDDNRDFTI-------------SEDGGVIRVAKNLNFERKSRYYLTIRGEDCA 2238
Query: 84 TDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
++V + +T VT+ V+D NDN+PVF Y L + + V F + V
Sbjct: 2239 SEVGETPRGDTAQVTITVIDINDNAPVFLDSPY------LAHVMENMVPPGGGF--VIQV 2290
Query: 143 SATDAD----GDKVAYKLA-VPSNLVVIVPQTGELLLTGDPPSDD---VEYELTVEAHDL 194
A DAD D+V Y L ++L I TG++ L P D EY LT+ A D
Sbjct: 2291 KAYDADTPPYNDQVRYFLKEGDTDLFRINASTGDIFLLR--PLDRELVAEYTLTLVAMDT 2348
Query: 195 QSP 197
SP
Sbjct: 2349 GSP 2351
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 65 TSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVF 110
TSG +DRE+VA YSL ++A G+ +T V + VLD NDN P F
Sbjct: 821 TSGCLDREQVAYYSLQLSAR--AGLAYGQTSVNITVLDINDNPPRF 864
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 23/136 (16%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y++ N F+L NP+T GV +T+ +D E+V Y LV+ A
Sbjct: 1874 PNSQLSYTLISDWANDVFSL-NPST-----------GVFTLTAS-LDYEQVQHYILVVQA 1920
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
TD GI + VTV +V+D NDN+P+F G + + N + S+ +
Sbjct: 1921 TD-GGIPALSSTVTVYCNVVDLNDNAPIFE-------AGPHAADIVENTTIGTPILSVAA 1972
Query: 142 VSATDADGDKVAYKLA 157
D +V Y +A
Sbjct: 1973 QDLDSGDNGRVIYAVA 1988
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 101/260 (38%), Gaps = 44/260 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y GN+ FA+ T L+ T +DRE L ++A D
Sbjct: 475 IYYDFDSGNEQGWFAIDQDTG-------------LVTTVATLDREVQGSIELHVSARD-G 520
Query: 88 GINK--AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G N A TH+ V +LDEND +P FSQ V R +L+ N + +V
Sbjct: 521 GPNPKYASTHLKVTILDENDEAPRFSQNVVRV-------TLSENTXXXXXXXXLTAVDND 573
Query: 146 DADGDKVAYKLAVPSNLVVIVPQTGEL-LLTGDPPSD-------DVEYELTVEAHDLQSP 197
VAY S++ P+T L LTG + EY++ V A D +P
Sbjct: 574 QGTNGSVAYSFH--SSVSRDYPKTFALDGLTGQLTTKVNLDRETTAEYQILVIAKDQGTP 631
Query: 198 SRYAREPAQVWLQF-----NSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA-VRPTKRID 251
+ + A V L NSPV + L I + + K T A R ++
Sbjct: 632 PQSST--ATVILTLEDVNDNSPVFYPWRYLMPIPEDAPPGTSVGKVTATDADARENAQVR 689
Query: 252 FSETDGEMEGRIVFALEKET 271
+S G G +F +++ T
Sbjct: 690 YSLESG---GEGLFTVDERT 706
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 114/306 (37%), Gaps = 61/306 (19%)
Query: 12 GLPILVASSH---KHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G PIL ++ + V Y++ G++N F + + +G L T
Sbjct: 1964 GTPILSVAAQDLDSGDNGRVIYAVAGGDENGDFGV-------------APNGTLF-TRKL 2009
Query: 69 IDREEVAQYSLVITATDVKGIN----KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
+DRE+ Y+L+++ATD VTV +LD ND SP F + K
Sbjct: 2010 LDREQKPLYNLILSATDSPLPPALPLSCTVQVTVVLLDVNDMSPEF--------ISPTKI 2061
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE 184
S+ N +I +V + V Y L + + P G L ++G S D E
Sbjct: 2062 SIIENAPSNTVVMAIKAVDRDEGRNGYVEYSLEDTTLPFTVGPVDGLLRVSG---SLDRE 2118
Query: 185 ----YELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQMIDRKSEAPHRIEK 237
Y L V A D P R + V + NSPV Q + E
Sbjct: 2119 LRSNYTLEVTAKDRGEPPRSSSTAVTVTVLDENDNSPVFDPRQYSATV---------AEN 2169
Query: 238 RRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDV-RVK 296
+ +V +D E GR+ R + D+N T+ E+G V RV
Sbjct: 2170 ASIGASVLQVSAMDRDEG---ANGRV---------RYGIAMGDDNRDFTISEDGGVIRVA 2217
Query: 297 KRWDFE 302
K +FE
Sbjct: 2218 KNLNFE 2223
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 54/124 (43%), Gaps = 24/124 (19%)
Query: 39 HTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD----VKGINKAET 94
++ A ++P R +GV+ T IDREEV Y LV+ ATD AE
Sbjct: 1431 YSIASQDPEDQVRRFGINPSTGVIH-TLLPIDREEVDTYKLVVVATDSAQPASARLSAEK 1489
Query: 95 HVTVDVLDENDNSPVF----------------SQK---VYRFIVGDLKSSLNSNVSHWKK 135
V V V D NDN+P+F QK V + + DL SS N V++
Sbjct: 1490 LVIVIVEDINDNAPIFVSMSAVVLPLKGNYYQYQKEITVTQLVARDLDSSTNGLVTYELL 1549
Query: 136 FSSI 139
SSI
Sbjct: 1550 RSSI 1553
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 15/83 (18%)
Query: 65 TSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQK---------- 113
T+ +DREE+A Y L++ A D + T V + VLD+NDN P F++
Sbjct: 2744 TNAKLDREEIASYELIVEARDQGQPSLTGTATVLLTVLDKNDNPPQFTRLFSVNVTENAE 2803
Query: 114 ----VYRFIVGDLKSSLNSNVSH 132
V R DL N+NV++
Sbjct: 2804 IGTFVIRITSSDLDIGQNANVTY 2826
>gi|334331227|ref|XP_003341469.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Monodelphis
domestica]
Length = 4550
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 125/285 (43%), Gaps = 44/285 (15%)
Query: 23 HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVIT 82
H V Y I GN FA+ NP SGV+ +T +D E + YSL++
Sbjct: 1654 HSQSSVVYEIKDGNIGDAFAI-NP-----------NSGVI-ITQKALDFETLPFYSLIVQ 1700
Query: 83 ATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
T++ G++ A T V V + DENDN+PVF Q Y ++ + + ++S V K + +
Sbjct: 1701 GTNMAGLS-ANTTVWVHLQDENDNAPVFLQARYTGLISE-SAPISSVVLTDKNVPLV--I 1756
Query: 143 SATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQ 195
A DAD + + Y++ S I TG + +L+ D + ++ TV+ HD+
Sbjct: 1757 RAADADKESNALLVYQIVESSAHKYFAIDSSTGAIRTVLSLDYEEAPI-FQFTVQVHDMG 1815
Query: 196 SPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKR------ 249
+P +A A V ++++D P + + PT R
Sbjct: 1816 TPRLFAEYAANV-------------TIRVVDINDCPPVFSKMLYEASVLLPTYRGVKVIT 1862
Query: 250 IDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVR 294
++ ++ D ++++++ + EKF I + ITV +R
Sbjct: 1863 VNATDADSLAFSQLMYSIPEGNIGEKFLINPKTGTITVQNTTQLR 1907
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 32/200 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + Y+I GN++ F++ ++ +G + +
Sbjct: 3209 GTEVLQVYAASRDIEANAEITYAIISGNEHGKFSI------------DATTGAIFIID-H 3255
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E Y L + ATD ++ T V V+V D NDN+PVFSQ +Y ++ + + L
Sbjct: 3256 LDYESSHDYYLTVEATDGGTPSLSDVAT-VNVNVTDINDNTPVFSQDMYTAVISE-DAIL 3313
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
SI +V A DADG + Y + N I P GE+ +T +
Sbjct: 3314 E---------QSIVTVMADDADGPSNSHIHYSIIDGNQGNPFTIDPVRGEIKVTQLLDRE 3364
Query: 182 DVE-YELTVEAHDLQSPSRY 200
+ Y LTV+A D SP R+
Sbjct: 3365 TISGYTLTVQAADNGSPPRF 3384
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN FA+ K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1172 LTYKITSGNPQGFFAI------------HPKTGLITTTSRKLDREQQDEHILEVTVTDNG 1219
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRF 117
K+ V V +LDENDN P F QK Y+
Sbjct: 1220 NPPKSTIARVIVKILDENDNKPQFLQKFYKI 1250
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + P +RY I G++ + F + + +R T+
Sbjct: 46 ENSAAKTYV-GHPVKMGIYLTDPSWEIRYKIISGDNENLFKAEEYILGDFCFLRIRTKGG 104
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y L + A + +A T + V VLD ND P+FS Y
Sbjct: 105 NTAIL------NREVKDHYLLTVKAVEKNTNAEARTKIRVQVLDTNDLRPLFSPTSYSV- 157
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 158 ------SLPENTIIR---TSIARVSATDADIGTNGEFYYSFKERTDMFAIHPTSGVVVLT 208
Query: 176 G 176
G
Sbjct: 209 G 209
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN + F + +P EI+ + +DRE ++ Y+L + A D
Sbjct: 3333 IHYSIIDGNQGNPFTI-DPVRGEIK------------VTQLLDRETISGYTLTVQAADNG 3379
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+PVFS+ Y I+
Sbjct: 3380 SPPRFNTTTVNIDVSDVNDNAPVFSKGNYSIII 3412
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 106/250 (42%), Gaps = 36/250 (14%)
Query: 50 EIRNSTESKSGV----------LLVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVT 97
EIR S SGV ++ T+ +DRE V+ Y L + ATD +G+ + T +
Sbjct: 1066 EIRYSIRDGSGVGVFKIDEEKGVIETAEKLDRETVSHYWLTVFATD-QGVVPLSSFTEIY 1124
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAY 154
+++ D NDN+P S+ VY V + + K S+ + A D D DK+ Y
Sbjct: 1125 IEIEDVNDNAPQTSEPVYYPEV----------MENSPKDVSVVQIEAFDPDSSSSDKLTY 1174
Query: 155 KLAV--PSNLVVIVPQTGELLLTG---DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL 209
K+ P I P+TG + T D D E+ L V D +P + A+V +
Sbjct: 1175 KITSGNPQGFFAIHPKTGLITTTSRKLDREQQD-EHILEVTVTDNGNPPKSTI--ARVIV 1231
Query: 210 QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVR-PTKRIDFSETDGEMEGRIVFALE 268
+ Q LQ K P R + R A R P R+ ++ D I +++E
Sbjct: 1232 KILDENDNKPQFLQKF-YKIRLPERDKPERERGAKREPIYRVIATDKDEGPNAEISYSIE 1290
Query: 269 KETEREKFKI 278
E KF I
Sbjct: 1291 DGDEHGKFFI 1300
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 27/151 (17%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GND+ F + + ++G+L V S +DRE +Y+L IT D+
Sbjct: 755 YAISGGNDDSCFMI------------DLETGMLKVLS-PLDREATEKYTLNITVYDLGIP 801
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
KA + + VLD NDN P F Q+ Y V + + + +S I V A D D
Sbjct: 802 QKASWRLLDIRVLDANDNKPEFLQESYFIEVSEDR----------EPYSEIIQVEAVDKD 851
Query: 149 ---GDKVAYKLAVPSNLVVIVPQTGELLLTG 176
+V Y L ++ I +TG + + G
Sbjct: 852 LGPNGEVKYYLLTDTDKFSIDSETGIVKVVG 882
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 115/283 (40%), Gaps = 54/283 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N I+N + + +DRE+ Y L ITATD
Sbjct: 2917 VTYYITGGDPLGQFAVEN-----IQNEWK------VYVKKPLDREKRDSYLLTITATD-- 2963
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G ++ V V VLD NDNSP+ + Y ++ + K I VSA DA
Sbjct: 2964 GAFSSKAIVEVKVLDANDNSPICEKSAY-------SDTIPEDTVPGKL---IMQVSAIDA 3013
Query: 148 D---GDKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSPSRY 200
D ++ Y L+ P + I TGEL P D Y L V+A D R+
Sbjct: 3014 DIRSNAEITYTLSGPGAEKFKINADTGELKTLA--PLDREQQAVYNLLVQATD--GGGRF 3069
Query: 201 AREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEME 260
Q+ + F + D S P+ I T P R+ ++ D +
Sbjct: 3070 ----CQMSVLFTLEDVNDNA-----PEFSADPYAITVFENTEPKTPLTRVQATDADAGLN 3120
Query: 261 GRIVFALEKETEREKFKIRDENPWITVDE-NGDVRVKKRWDFE 302
+I ++L + + ++DE +G +R++K D E
Sbjct: 3121 HKISYSL----------VNSADGQFSIDESSGIIRLEKPLDRE 3153
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 79/175 (45%), Gaps = 20/175 (11%)
Query: 33 TQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV-KGINK 91
+Q N+ + + NP + R SGVL T DRE+ + +V+ T+ K
Sbjct: 1968 SQINEPLFYHILNPDS---RFKISRTSGVLSTTGVPFDREQQEVFDVVVEVTEEHKPSVM 2024
Query: 92 AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD--- 148
A V V V D+NDN+PVF Y V ++++V H I SV+A D D
Sbjct: 2025 AHVVVRVSVEDQNDNAPVFVNLPYYAAV-----KVDADVGHI-----IRSVTAVDRDIGR 2074
Query: 149 GDKVAYKLAVPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSPSRYA 201
+V Y L I P +GE+ L +P + + EY +T+ A D P+ A
Sbjct: 2075 NGEVHYYLKEHHEHFQIGP-SGEISLKKKFEPDTLNKEYLITIVAKDGGDPAFSA 2128
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQK 113
+S SG++ + +D EE ++ L++ A D G+ ++ VTV V D NDN P+F Q
Sbjct: 2299 DSSSGLISLVR-TLDYEETQRHELLVRAVD-SGMPPLSSDAIVTVHVTDLNDNPPLFDQP 2356
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKL 156
+Y ++ ++ H + + + A +D DK+ Y +
Sbjct: 2357 LY-------EAKISEQAPHGHFVTCVKAYDADSSDTDKLEYSI 2392
>gi|345324548|ref|XP_001506551.2| PREDICTED: hypothetical protein LOC100074995 [Ornithorhynchus
anatinus]
Length = 651
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 79/177 (44%), Gaps = 27/177 (15%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET 94
N AL+ R G LLVT+ +DRE VA+Y L + A D +G T
Sbjct: 262 ANGQVRCALQGRGHEHFRLQPAHAGGYLLVTAAPLDRERVARYHLTLVAED-RGAPPRRT 320
Query: 95 H--VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---G 149
TV V DENDN+P+F++ VY V + N+ +H + +V+A D D
Sbjct: 321 RRPYTVRVADENDNAPLFARPVYAVAVRE----NNAPGAH------LATVAARDPDLGRN 370
Query: 150 DKVAYKL----AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSPS 198
+V Y+L + V + P +G L S D E +L V+A D SPS
Sbjct: 371 GRVTYRLLDADGAAAPYVSVDPASGALYALR---SFDYEALRRLDLRVQASDGGSPS 424
>gi|324499461|gb|ADY39769.1| Cadherin-related tumor suppressor [Ascaris suum]
Length = 4485
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 115/258 (44%), Gaps = 47/258 (18%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
SG++ + S IDRE ++Y+L + A D G+ + T +T+ +LD+NDN+P+F++ ++F
Sbjct: 2735 SGIVTLIS-HIDRETQSEYALNVRAMD--GVWQVRTSLTITILDQNDNAPIFTRDHFKFF 2791
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDK--VAYKLAVPSNLVVIVPQTGELLLT 175
V V++ S +G + A DAD GD V Y L + + P +G L++
Sbjct: 2792 V----------VNNAAVDSIVGRIEARDADSGDNGVVFYSLRCAQDRFTVDPSSG--LIS 2839
Query: 176 GDPPSDDVEYELTV---EAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
P + E+ + EA D P+ A ++ + N V+ + DR+ P
Sbjct: 2840 LSIPLGNYTNEVFMCEAEAIDGGMPALAAMATVEIIIVGNKIVVP-----RFADRR---P 2891
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGD 292
+ F+ G G ++ L+ E ++ + +DENG
Sbjct: 2892 Y------------------FALLAGSPNGTVIGQLKTEPPTYYMRVLVYDDRFAIDENGT 2933
Query: 293 VRVKKRWDFEELGPEKTI 310
+ + ++ E+G T+
Sbjct: 2934 LSTRSKFPTSEIGRSITL 2951
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 24/139 (17%)
Query: 65 TSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
T+ +DRE A Y+L + D G AE ++T++V D NDN+P+ + Y
Sbjct: 1111 TTAWLDRELCATYNLTVIIKDGGG-RLAECNITIEVEDVNDNAPIMKAEFY--------- 1160
Query: 125 SLNSNVSHWKKF---SSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDP 178
H++ F SIG VSA D D ++ Y L + + + +GEL G+
Sbjct: 1161 -------HFEAFLTKHSIGFVSAIDRDQGVNAEITYSLVRRTTHIKVDAASGELSHDGEI 1213
Query: 179 PSDDVEYELTVEAHDLQSP 197
+ V Y LT+ A D P
Sbjct: 1214 EAGKV-YNLTIVATDQGQP 1231
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 15/90 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y+I QG D FA+ +S+SG + V + +D EE A+Y+L + A D+
Sbjct: 2207 ISYAIVQG-DTSLFAI------------DSQSGQMFVKAA-LDYEECAEYNLKVQAIDMG 2252
Query: 88 GIN-KAETHVTVDVLDENDNSPVFSQKVYR 116
A H+TV V D NDN P+F YR
Sbjct: 2253 TPRLSATVHITVIVEDINDNDPIFELPYYR 2282
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 21/141 (14%)
Query: 69 IDREEVAQYSLVITATDVKGINK---AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+DRE A++ L IT TD + +K A T +TV+V+D NDN+P F F+ ++
Sbjct: 1917 LDRESSAKHVLRITVTDQRPPHKVFSASTTLTVNVIDVNDNAPTFISSNTFFVFEEVPLG 1976
Query: 126 LNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL---AVPSNLVVIVPQTGELLLTGDPP 179
+ +G V A DAD +V Y++ + P L ++ P G + + G
Sbjct: 1977 -----------TLVGIVVAIDADFGNNAQVQYRIIPVSHPEALFIVDPILGYIQVNGRVD 2025
Query: 180 SD-DVEYELTVEAHDLQSPSR 199
+ + LT+EA D SP R
Sbjct: 2026 REKKAIHHLTIEASDGGSPIR 2046
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 51/112 (45%), Gaps = 14/112 (12%)
Query: 5 KSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLV 64
K G K + ASS ++Y I G+ F++ NP T + L
Sbjct: 2487 KEGEAEKLITTFAASSSNISSYGIQYGIAGGDPFSDFSI-NPHTGQ------------LF 2533
Query: 65 TSGDIDREEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQKVY 115
T G ID E +Y L+I+ATD A T + V+V D NDN P+F Q +Y
Sbjct: 2534 TRGTIDYERRRRYRLLISATDQHNHPLVAFTSIVVNVEDVNDNRPIFDQILY 2585
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 19/114 (16%)
Query: 51 IRNSTESKSGVLLV-TSGDIDREEVAQYSLVITATDVKGINK---AETHVTVDVLDENDN 106
+R+++ S VLL+ + +DRE+ Y + ++A+D G N + V V+VLD NDN
Sbjct: 167 VRSTSHSGDDVLLLELTESLDREQKDLYVVNVSASD--GGNPPRFGYSTVLVNVLDANDN 224
Query: 107 SPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA 157
+PVF Q Y S +H + ++I +V A+DAD ++ Y+L+
Sbjct: 225 APVFEQSHYE----------ASVTAHPGQRAAIITVEASDADVGENARILYRLS 268
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 16/91 (17%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+ YSI + TFA+K T +V +DRE +Y L I A+D
Sbjct: 583 LISYSIIDNSSRRTFAIKEKTGE-------------IVLRRVLDREYQHRYVLTIRASD- 628
Query: 87 KGINK--AETHVTVDVLDENDNSPVFSQKVY 115
G + + T V V+VLD NDN P F Q Y
Sbjct: 629 NGYPRRSSTTQVIVNVLDINDNRPHFLQDEY 659
>gi|402860228|ref|XP_003894536.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Papio anubis]
Length = 4291
Score = 57.0 bits (136), Expect = 1e-05, Method: Composition-based stats.
Identities = 79/280 (28%), Positives = 117/280 (41%), Gaps = 53/280 (18%)
Query: 42 ALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDV 100
AL N + E+ S + +SG L+ T+ +DRE + ++ L +TA D A T V V V
Sbjct: 541 ALMNSRSLELF-SIDPQSG-LIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTV 598
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA 157
D ND+SPVF Q YR +L NV ++ I + ATD D + Y+
Sbjct: 599 ADRNDHSPVFEQAQYR-------ETLRENV---EEGYPILQLRATDGDAPLNANLRYRFV 648
Query: 158 VPSNLVV-------IVPQTGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVW 208
P I P++G + +G + +E YEL VEA D Q P P
Sbjct: 649 GPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSAT 703
Query: 209 LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGR 262
++ + VL D AP EKR V + VRP R+ ++ D + G
Sbjct: 704 VRVHITVL---------DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGL 754
Query: 263 IVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ + + R F I G+++V DFE
Sbjct: 755 VHYNIISGNSRGHFAID--------SLTGEIQVVAPLDFE 786
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 664 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 722
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 723 KRY---VAQVREDV-------RPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDS 772
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 773 LTGEIQVVA--PLDFEAEREYALRIRAQDAGRP 803
Score = 42.4 bits (98), Expect = 0.32, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 30/179 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 1253 ENSIVGSVVA--QITAVDPDEGPNAHIMYQIVEGNIPELFQM------------DIFSGE 1298
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIV 119
L D+D E +Y +V+ AT +++A HV + +D+NDNSPV + Q ++ V
Sbjct: 1299 LTALI-DLDYEARQEYVIVVQATSAPLVSRATVHVRL--IDQNDNSPVLNNFQILFNNYV 1355
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
+ + S + IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1356 SNRSDTFPSGI--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1406
Score = 41.2 bits (95), Expect = 0.59, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y
Sbjct: 886 SGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHL------- 938
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
LN + + +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 939 RLNEDAA---VGTSVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLD 995
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 996 YKQERYFKLVLTASD 1010
Score = 39.3 bits (90), Expect = 2.2, Method: Composition-based stats.
Identities = 58/218 (26%), Positives = 87/218 (39%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 1156 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1203
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V+ Y L A D +G+ T V++ V D NDN+PVF + + V + NS V
Sbjct: 1204 AVSVYELTAYAVD-RGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1257
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1258 G-----SVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1312
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR + NSPVL + Q+L
Sbjct: 1313 YVIVVQATSAPLVSRATVHVRLIDQNDNSPVLNNFQIL 1350
Score = 38.5 bits (88), Expect = 4.7, Method: Composition-based stats.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 22/177 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKV 114
++ SG + + + +D E+ Y+L ITA D KA+T +V V V D NDN+P F
Sbjct: 1082 DADSGAITLQA-PLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASH 1140
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN---LVVIVPQ 168
Y +V + F+S+ +SATD D +V Y + I P
Sbjct: 1141 YTGLVSE----------DAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPT 1190
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQL 221
+G + + V YELT A D P QV +Q N+PV E+
Sbjct: 1191 SGIVRTVRRLDREAVSVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEF 1247
Score = 38.1 bits (87), Expect = 5.3, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ GT V + V + + + + Y IT GN + FA+ ++ GV
Sbjct: 942 EDAAVGTSV----VSVTAVDRDANSAISYQITGGNTRNRFAI------------STQGGV 985
Query: 62 LLVTSG-DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +D ++ + LV+TA+D + ++ +V +++ D N + PVF Y V
Sbjct: 986 GLVTLALPLDYKQERYFKLVLTASD-RALHD-HCYVHINITDANTHRPVFQSAHYSVSVN 1043
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPP 179
+ + S+I +SA+D D G+ + NL +T P
Sbjct: 1044 EDRPV----------GSTIVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAP 1093
Query: 180 ---SDDVEYELTVEAHDLQSPSR 199
D V Y L + A D P +
Sbjct: 1094 LDYEDQVTYTLAITARDNGIPQK 1116
Score = 38.1 bits (87), Expect = 5.9, Method: Composition-based stats.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 740 LRVTATDRDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVVA-PLDFE 786
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y+L I A D ++ ++ V+D ND+ P+F ++ V + + L +V
Sbjct: 787 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLE-NAPLGHSV 845
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL-AVPSNL-VVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L V S+ VI TG + ++G + VE Y
Sbjct: 846 IH------IQAVDADHGENARLEYSLTGVASDTPFVINSATGWVSVSGPLDRESVEHYFF 899
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 900 GVEARDHGSP 909
>gi|348543886|ref|XP_003459413.1| PREDICTED: protocadherin Fat 3-like [Oreochromis niloticus]
Length = 4593
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 134/312 (42%), Gaps = 52/312 (16%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
MEN+ GT V + + S+ + Y I QGN +H F + SG
Sbjct: 1685 MENALVGTSVSTVSAVSQST-------LNYDIKQGNTDHVFKINQ------------YSG 1725
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
V+ T +D E Y+L++ A ++ G+ T + + V+D+NDN PVF + Y +
Sbjct: 1726 VI-TTQKSLDYETTTSYTLIVQAINMAGMASNAT-LLIQVVDDNDNPPVFQELHYHGSIS 1783
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVV--IVPQTGELLLTGDP 178
+ + +NS V + + + ATDAD ++ A L+V I+ T ++ T D
Sbjct: 1784 E-AAPINSVVLNLDGSPLV--IKATDADRNQNA--------LLVYQIIEDTAKMFFTVDS 1832
Query: 179 PSDDVEYELTVEAHDLQSPSRY-----AREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPH 233
+ + T+ D ++ + + R+ L SP E +Q+ID P
Sbjct: 1833 GTGSIR---TIANLDYETCTIFHFHVHVRDNGTPQLTAESPT---EVTIQVIDTNDSPPR 1886
Query: 234 RIEKRRVTRAVRPTK------RIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
+ T + PT ++ ++ D ++ ++++L + E + F I+ + I V
Sbjct: 1887 FTQSSYETVLLLPTYVGVEALQVSATDPDKDIPAELIYSL-TDGELQHFGIKPSSGIIVV 1945
Query: 288 DENGDVRVKKRW 299
N + + R+
Sbjct: 1946 KNNNFSKERFRF 1957
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 123/307 (40%), Gaps = 59/307 (19%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G L ++ + +VRY I + N+T +S SG++L T+
Sbjct: 2307 GTPALQVVATDKDSEKNSVVRYQIFSNSRNNTEYFH----------IDSSSGLIL-TARM 2355
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSL 126
+D E + +Y ++ ATD G + V+V V+ D NDN PVF+Q +Y V +L +
Sbjct: 2356 LDHELLQKYDFIVRATD-NGFPPLSSEVSVTVMLNDINDNPPVFNQLLYEAYVNELATR- 2413
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNL--VVIVPQTGELLLTGDPPSD 181
H+ I V A+DAD DK+ Y + + I +TG + L+
Sbjct: 2414 ----GHF-----ITCVQASDADSSDFDKLEYSILSGNEKRNFAIEKKTGIITLSSHRKQR 2464
Query: 182 -DVEYELTVEAHDLQSPSRYAREPAQVW-LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRR 239
+ Y L V D S A+ +VW +SPV + E R
Sbjct: 2465 MEPAYSLNVSVSDGVFTST-AQVHVKVWRANLHSPVFGQNM------------YGAELRE 2511
Query: 240 VTRAVRPTKRIDFSETD---GEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
A TK I TD GE G I ++ + ++KF I D NG +
Sbjct: 2512 --NAAVGTKVIQVKATDADPGEF-GLITYSFVNDVGKDKFSI---------DANGQIYTT 2559
Query: 297 KRWDFEE 303
++ D E+
Sbjct: 2560 EKLDRED 2566
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 15/91 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y I GN + F + +++G++ TS +DRE+ ++ L + +D
Sbjct: 1187 LNYRIISGNPQNFFTIN------------TRTGLITTTSRKLDREQQTEHILEVLVSD-G 1233
Query: 88 GINKAETHV--TVDVLDENDNSPVFSQKVYR 116
G N ++ V V VLDENDN P+F +KVY+
Sbjct: 1234 GPNPKQSTVWVIVQVLDENDNKPIFPEKVYQ 1264
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
++ + +D E+ + Y++ + ATD G + A T + + V+D NDN+P+F Q Y IV +
Sbjct: 1419 IIIAKPLDAEQCSFYNMTVQATD--GTSTAHTQIHITVMDNNDNAPIFFQPTYDVIVSE 1475
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 70/155 (45%), Gaps = 39/155 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL-----LVTSGDIDREEVAQYSLVIT 82
V Y IT GN FAL G++ + G +DREE Y++ +T
Sbjct: 2973 VSYHITGGNYRGVFAL----------------GLVQGEWKMYVKGPLDREECNLYNINVT 3016
Query: 83 ATDVKGINKAETHVTVDVLDENDNSPVFSQKVY-RFIVGDLKSSLNSNVSHWKKFSSIGS 141
A+D G+ ++ V V V+D NDNSP+ + +Y +I DL ++ S +
Sbjct: 3017 ASD--GLFVSQATVEVTVVDTNDNSPICDKVMYTAYIPEDLPAN-----------SVLLR 3063
Query: 142 VSATDAD---GDKVAYKLAVP-SNLVVIVPQTGEL 172
V ATDAD + Y L P S I P +GE+
Sbjct: 3064 VGATDADMGISGWIQYSLHGPGSQDFNIDPDSGEI 3098
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 14/116 (12%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G + L + AS + + YSI GN++ F + +P T G +LV
Sbjct: 3263 GVGTEVLRVYAASKDIGTNAEITYSIRSGNEHGKFHI-HPLT-----------GAILVAQ 3310
Query: 67 GDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+D E Y L + A D + A T V +D+ D NDN P+FS VY +V +
Sbjct: 3311 -PLDYETCRDYFLTVEARDGGTPSLSAITTVNIDLTDVNDNPPMFSHSVYTAVVSE 3365
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 70/157 (44%), Gaps = 25/157 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+RY IT G+D F + + +R T+ + +L +RE Y L + A+
Sbjct: 81 IRYRITSGDDEGFFKAEEYVLGDFCFLRIRTKGGNAAIL------NREIQDNYVLTVKAS 134
Query: 85 DVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
VKG ET V++ VLD ND P+FS Y + + + L +SI V
Sbjct: 135 -VKGEALLETWTKVSIQVLDMNDLRPLFSPTTYSVTIAE-STPLR---------TSIAQV 183
Query: 143 SATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTG 176
+ATDAD + Y + L + P +G + L+G
Sbjct: 184 TATDADIGSNGEFYYFFKEKTELFAVHPTSGVVTLSG 220
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI G D H L +P SGV+ V +DRE V YSL I A D
Sbjct: 3389 VLYSIVSG-DRHNQFLIDPL-----------SGVIKVNK-QLDRETVPSYSLAIRALDSG 3435
Query: 88 GINKAET-HVTVDVLDENDNSPVFS 111
+ T V +D+ D NDN P FS
Sbjct: 3436 TPPMSSTVMVNIDISDINDNPPTFS 3460
>gi|297293817|ref|XP_001091341.2| PREDICTED: protocadherin Fat 1, partial [Macaca mulatta]
Length = 1603
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + HP VRY I G+ + F + + +R T+
Sbjct: 45 ENSAAKTYV-GHPVKMGIYMTHPSWEVRYKIVSGDSENLFKAEEYVLGDFCFLRIRTKGG 103
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A T V V VLD ND P+FS Y
Sbjct: 104 NTAIL------NREVKDHYTLIVKAVEKNTNMEARTKVRVQVLDTNDLRPLFSPTSYSV- 156
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 157 ------SLPENTA---IRTSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGVIVLT 207
Query: 176 G 176
G
Sbjct: 208 G 208
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 15/127 (11%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+ +++ A + L +T +D KA T V V VL N N P F+Q Y K++ +
Sbjct: 426 VKKQQAAHFELEVTTSD----RKASTKVLVKVLGANSNPPEFTQTAY-------KAAFDE 474
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT 188
NV S+ +V + + V Y + +++ ++ + T S++++YEL
Sbjct: 475 NVPIGTTVMSLSAVDPDEGENGYVTYSITNLNHVPFVIDHFTGAVST----SENLDYELM 530
Query: 189 VEAHDLQ 195
+ L+
Sbjct: 531 PRVYTLR 537
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 14/87 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GN++ F + + ++G+L + S +DRE +Y+L IT D+
Sbjct: 754 YAISGGNEDSCFMI------------DMETGMLKILS-PLDRETTDKYTLNITVYDLGIP 800
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVY 115
KA + V V+D NDN P F Q+ Y
Sbjct: 801 QKAAWRLLDVVVVDANDNPPEFLQESY 827
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 67/150 (44%), Gaps = 31/150 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYSI G+ F + T ++ TS +DRE + Y L + ATD +
Sbjct: 1069 IRYSIRDGSGVGVFKIGEETG-------------IIETSDRLDRESTSHYWLTVFATD-Q 1114
Query: 88 GINKAET--HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G+ + + ++V D NDN+P S+ VY + L++S K S+ + A
Sbjct: 1115 GVVPLSSFIEIYIEVEDVNDNAPQTSEPVYYPEI--LENS--------PKDVSVVQIEAF 1164
Query: 146 DAD---GDKVAYKLAV--PSNLVVIVPQTG 170
D D DK+ Y++ P + P+TG
Sbjct: 1165 DPDLSSNDKLVYRITSGNPQGFFAVHPKTG 1194
>gi|410956743|ref|XP_003984998.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Felis catus]
Length = 2968
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 116/265 (43%), Gaps = 60/265 (22%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH + Y I GN+ F L E K+GVL + +D EE +++L I A
Sbjct: 2295 PHAEIIYHIISGNERGHFHL------------EEKTGVLYLIK-PLDYEETTKFTLTIQA 2341
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
+D + + + ++VLD+ND++P +F+ +L + NV FS++ SV+
Sbjct: 2342 SDEERKHFSFAVAFINVLDDNDHAP-------QFMFSNLNCVVPENV---PVFSTVCSVN 2391
Query: 144 ATDADG---DKVAYKLAVPSNLVVIVPQTGELL----LTGDPPS-------DDVEYELTV 189
A D D ++ Y + P + +P+ LTGD + +D +Y LTV
Sbjct: 2392 ALDFDAGPYGELTYSILSPCSTTHGMPRDHHPFLIDPLTGDIHTKQVLDYENDSKYCLTV 2451
Query: 190 EAHDLQSPSRYAREPAQVWL------QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA 243
+A D + VWL +F QD+ + EK ++ +
Sbjct: 2452 QAKDKGD----SAASLMVWLDIEGIDEFEPIFTQDQYFFNL----------PEKNKIRQL 2497
Query: 244 VRPTKRIDFSETDGEMEGRIVFALE 268
V +++ S+ D ++G I+++LE
Sbjct: 2498 V---GKVEASDADAGIDGVILYSLE 2519
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 70/155 (45%), Gaps = 31/155 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
V YSI GN+N F L +S LL T+ +D E Q+ L + A D
Sbjct: 1253 VTYSILSGNENMAFMLD-------------ESSGLLTTTCPLDYEIKTQHILTLLALDDG 1299
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ ++ ++T +T+ VLD ND +PVF Q +Y V + N N + + V A
Sbjct: 1300 IPVLSSSQT-LTITVLDVNDEAPVFQQNLYEASVKE-----NQNPGEF-----VIRVEAM 1348
Query: 146 DADG---DKVAYKL--AVPSNLVVIVPQTGELLLT 175
D D K +++ S L I P TGE++ T
Sbjct: 1349 DRDSGINSKFQFEIMPGASSGLFKINPDTGEVVTT 1383
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 117/297 (39%), Gaps = 60/297 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI GN + F ++ T I + K LV +DRE A ++LVI A+D
Sbjct: 2184 VDYSIISGNSQNNFHVE---TSFIHSEDPYKQTGYLVLLRSLDREVAASHNLVIVASDHG 2240
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS----V 142
+ T V+++VLD NDN P FS Y +H K+ + +GS V
Sbjct: 2241 CPPLSSTAIVSIEVLDVNDNPPKFSSLKYH--------------AHVKESTPLGSHITVV 2286
Query: 143 SATDAD---GDKVAYKLAVPS--NLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDL 194
SA D D ++ Y + + + +TG L L P D ++ LT++A D
Sbjct: 2287 SANDRDVGPHAEIIYHIISGNERGHFHLEEKTGVLYLIK--PLDYEETTKFTLTIQASDE 2344
Query: 195 QSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRI---------EKRRVTRAVR 245
+ R+ + F + ++D AP + E V V
Sbjct: 2345 E------RKHFSFAVAF----------INVLDDNDHAPQFMFSNLNCVVPENVPVFSTVC 2388
Query: 246 PTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
+DF D G + +++ RD +P++ GD+ K+ D+E
Sbjct: 2389 SVNALDF---DAGPYGELTYSILSPCSTTHGMPRDHHPFLIDPLTGDIHTKQVLDYE 2442
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 76/155 (49%), Gaps = 19/155 (12%)
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
V+LV + +D EE +Y L+I +D ++ E + V VLD NDN PVFSQ Y+ V
Sbjct: 2000 AVMLVKT--LDFEEATEYELLIQISDT--VHHTEGTLMVRVLDVNDNPPVFSQDSYQATV 2055
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADGDK-VAYKLAVPSNLVVIVPQTGELLLTGDP 178
+ + V + S+ +V ATD + ++ ++Y++ S I P G + T +P
Sbjct: 2056 PE-----SVPVGY-----SVLTVGATDVESNENISYRILSSSKEFSIDPMNGT-IFTINP 2104
Query: 179 --PSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ 210
P D + + VEA D P A ++ +Q
Sbjct: 2105 VLPLDKISTIQFLVEASDGGIPDLSALTLVEIEIQ 2139
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 17/117 (14%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+EN + G IL + + VRY I GN + FA+ N T+ +
Sbjct: 1438 LENQEPGVAYT---ILASDMDAGDNGAVRYHIIDGNTDEYFAI-NETSGD---------- 1483
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYR 116
L T+ +DRE+V+ ++LVI +D+ ++ + V VLD+ND+ P F Y+
Sbjct: 1484 --LSTTRALDREQVSNFTLVILCSDLGDPPRSSLVQLQVRVLDDNDHGPSFPTLHYQ 1538
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 46/185 (24%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHV-----TVDVLDENDNSPVFSQKVYRF 117
LVT+ +DRE V L ITA+D + +N + V V +LD ND+SP F
Sbjct: 1168 LVTASPLDRERVPAVMLTITASD-QAVNVTDRRVGSLMAKVVILDVNDHSPTF------- 1219
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGS----VSATDAD---GDKVAYK-LAVPSNLVVIVPQT 169
++ ++H K+ +++GS ++A D D +V Y L+ N+ ++ ++
Sbjct: 1220 --------MSFPMAHIKEDATVGSLVHHITAQDPDEGRNGRVTYSILSGNENMAFMLDES 1271
Query: 170 GELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQM--IDR 227
LL T P ++YE+ + H L + L PVL Q L + +D
Sbjct: 1272 SGLLTTTCP----LDYEIKTQ-HIL----------TLLALDDGIPVLSSSQTLTITVLDV 1316
Query: 228 KSEAP 232
EAP
Sbjct: 1317 NDEAP 1321
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 16/86 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+ YSI GN F + + SGV+ + +D E YSL++ ATD
Sbjct: 1875 LIEYSILSGNQGDAFHM------------DVLSGVV-TANAILDYEFTNSYSLIVQATD- 1920
Query: 87 KGINK--AETHVTVDVLDENDNSPVF 110
KG+ + +T+ V D NDN+P F
Sbjct: 1921 KGMPSLSGTSVITIQVTDTNDNAPAF 1946
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 18/119 (15%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQ-LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
EN +GT + + V + P Q ++YSI GN++ F+L S SG
Sbjct: 1749 ENCDAGTSI----VTVKAVAPDPIQDSIKYSIFSGNEDGVFSLC------------SNSG 1792
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
L V EV +I + +G ++A + V V + D NDN P F Q VY+ V
Sbjct: 1793 ELTVKEPKFLDFEVRNEVQLIILAESRG-HRAFSKVAVLIQDVNDNLPCFEQSVYQVSV 1850
>gi|194906021|ref|XP_001981299.1| GG11701 [Drosophila erecta]
gi|190655937|gb|EDV53169.1| GG11701 [Drosophila erecta]
Length = 1705
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 26/169 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI GND FA+ +SGV++V +DRE + +Y L++ A D
Sbjct: 635 VVYSIISGNDLRQFAVGQ------------ESGVIIVIR-KLDRESLTRYQLILKAEDTG 681
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G++ + T V + V D ND +P F ++ V K +S+G V ATDA
Sbjct: 682 GLSSSAT-VNIKVTDINDKNPEFEASTLPYVF---------QVEEGKAQASVGVVHATDA 731
Query: 148 D-GDKVAYKLAVPSNLVVIVPQT-GELLLTGDPPSDDV-EYELTVEAHD 193
D G ++P+++ + T GE+L + + + EY+ V A D
Sbjct: 732 DEGINAEITYSIPTDIPFTINATSGEILTAKELDYEQLNEYKFVVTAKD 780
>gi|8926617|gb|AAF81913.1|AF217749_1 protocadherin beta 9 [Homo sapiens]
Length = 797
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 72/149 (48%), Gaps = 22/149 (14%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ IT TD+ K E +T+ V D NDN+P F+Q Y V
Sbjct: 402 ILMTEGALDRESKAEYNITITVTDMGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVR 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 462 E----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNG 511
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ ++ V A D SP+
Sbjct: 512 HLFALRSLDYEALQAFDFRVGASDRGSPA 540
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + SL +TA D +++ T + + VLD NDN+P F+Q +Y +
Sbjct: 194 LVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALY-----E 248
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVV----IVPQTGELLL 174
++ NS V S I VSA DAD +V+Y S ++ I P +GE+ L
Sbjct: 249 TQAPENSPVG-----SLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFL 303
>gi|10047319|dbj|BAB13447.1| KIAA1621 protein [Homo sapiens]
Length = 787
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ +T TD+ K E ++TV + D NDN+P F+Q Y V +
Sbjct: 414 LVTERALDREARAEYNITLTVTDMGTPRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRE 473
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 474 ----NNSPALH------IGSVSATDRDSGINAQVTYSLLPPQDPHLPLASLVSINADNGH 523
Query: 172 LLLTGDPPSDDV-EYELTVEAHDLQSPS 198
L + + E+E V A D SP+
Sbjct: 524 LFALRSLDYEALREFEFRVSATDRGSPA 551
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 22/154 (14%)
Query: 49 HEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNS 107
HE R+ + LV ++DREE Q L +TA D ++ T V ++V+D NDN+
Sbjct: 194 HEFRDGRKYPE---LVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNA 250
Query: 108 PVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP----S 160
P F Q +Y+ + + NS + S + +VSA D DG K++Y L P S
Sbjct: 251 PEFEQPIYKVQIPE-----NSPLG-----SLVATVSARDLDGGANGKISYTLFQPSEDIS 300
Query: 161 NLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHD 193
+ + P TGE+ L + V YE+ ++A D
Sbjct: 301 KTLEVNPMTGEVRLRKQVDFEMVTSYEVRIKATD 334
>gi|449269882|gb|EMC80622.1| Protocadherin Fat 1 [Columba livia]
Length = 4590
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 120/279 (43%), Gaps = 42/279 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I GN FA+ NP SGV+ V+ +D E + Y+L + T++
Sbjct: 1698 VVYEIKDGNIGDAFAI-NP-----------NSGVI-VSQKILDFETLPVYTLTVQGTNMA 1744
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G++ T V V + DENDN+P+F Q Y ++ + +S+NS V K + + ATDA
Sbjct: 1745 GLSTNAT-VVVHLRDENDNTPIFMQAEYTGLISE-SASINSVVLTDKNIPLV--IRATDA 1800
Query: 148 DGDK---VAYKLAVPS--NLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYA 201
D + + Y++ PS I TG + ++ + +V+ HD+ P YA
Sbjct: 1801 DKESNALLVYQIVEPSVRKYFAIDSSTGAIRTVTSLDYEETNIFRFSVQVHDMGIPRLYA 1860
Query: 202 REPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKR------IDFSET 255
A V + +ID P + T + PT + ++ ++
Sbjct: 1861 EYAANV-------------TIYVIDINDCPPVFSRELYETSILVPTYKGVKVISVNATDA 1907
Query: 256 DGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVR 294
D + ++++++ + EKF I + I V +R
Sbjct: 1908 DSGIFSQLIYSIIEGNIGEKFSINPKTGDIIVQNTTQLR 1946
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 89/201 (44%), Gaps = 28/201 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTF-----ALKNPTTHEIRNSTE 56
ENS + T V G P+ + K+P +RY I G++ + F L N IR
Sbjct: 46 ENSAAKTYV-GHPVKMGIYIKNPLWDLRYKIISGDNENLFKAEEYVLGNFCFLRIR---- 100
Query: 57 SKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYR 116
+K G + ++RE Y L + A + + T V + VLD ND P+FS Y
Sbjct: 101 TKGG----NTAILNREVKDHYVLTVKAVEKNTNTETRTKVRIQVLDTNDLRPLFSPTSYS 156
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELL 173
SL N + +SI VSATDAD + Y +++ I P +G ++
Sbjct: 157 V-------SLPENTAVR---TSIARVSATDADIGTNGEFYYSFKERTDVFAIHPTSGVVV 206
Query: 174 LTGD-PPSDDVEYELTVEAHD 193
LTG SD YE+ + A D
Sbjct: 207 LTGRLDYSDTKHYEMEILAVD 227
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 30/198 (15%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L I AS + + YSI GN++ F++ +S +G + +
Sbjct: 3247 GTEVLQIYAASRDIEANAEITYSIVSGNEHGKFSI------------DSTTGAIFIIES- 3293
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+D E +Y L + ATD + ++ V ++V D NDN+PVFSQ Y ++ + + L
Sbjct: 3294 LDYESSHEYYLTVEATDGGTPSLSDVVTVNINVTDINDNTPVFSQDTYTAVISE-DAILE 3352
Query: 128 SNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSDD 182
S+ +V A DADG + + Y + N I P GE+ +T +
Sbjct: 3353 ---------QSVITVMADDADGPSNNCIHYTIIDGNQGNPFTIDPTRGEIKVTKLLDREK 3403
Query: 183 VE-YELTVEAHDLQSPSR 199
+ Y LTV+A D +P R
Sbjct: 3404 ISGYTLTVQASDNGNPPR 3421
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 47/92 (51%), Gaps = 15/92 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ NP K+G++ TS +DRE+ ++ L + TD
Sbjct: 1175 LTYKITSGNPQGFFSI-NP-----------KTGLITTTSRKLDREQQGEHILEVMVTD-N 1221
Query: 88 GINKAET--HVTVDVLDENDNSPVFSQKVYRF 117
GI T V V VLDENDN P F QK Y+
Sbjct: 1222 GIPPKSTIARVIVKVLDENDNKPQFLQKFYKI 1253
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ + Y+I GN + F + +PT EI+ + +DRE+++ Y+L + A+
Sbjct: 3368 NNCIHYTIIDGNQGNPFTI-DPTRGEIK------------VTKLLDREKISGYTLTVQAS 3414
Query: 85 DVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
D + T V +DV D NDN PVFS+ Y I+
Sbjct: 3415 DNGNPPRLNTTTVNIDVSDVNDNPPVFSKGNYSVII 3450
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 66/151 (43%), Gaps = 31/151 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N I+N + + +DREE Y L ITATD
Sbjct: 2955 VSYYITGGDPLGQFAIEN-----IQNEWK------VYVKKPLDREEKDNYLLNITATD-- 3001
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD--LKSSLNSNVSHWKKFSSIGSVSAT 145
G V V VLD NDNSPV + +Y V + L L I VSAT
Sbjct: 3002 GTFATRAVVEVKVLDANDNSPVCEKALYTDSVPEDALPGKL------------IMQVSAT 3049
Query: 146 DAD---GDKVAYKL-AVPSNLVVIVPQTGEL 172
DAD ++ Y L + + P TGEL
Sbjct: 3050 DADIRSNAEITYTLHGTGAEKFRLTPDTGEL 3080
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 14/87 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I+ GN++ +F + + + GVL + S +DRE +Y+L IT D+
Sbjct: 755 YVISGGNEDSSFIV------------DMERGVLKILS-PLDREVKDKYTLNITVYDLGVP 801
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVY 115
K+ H+ + +LD NDN+P F Q Y
Sbjct: 802 QKSAWHLLDIKILDANDNAPEFLQDSY 828
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 75/174 (43%), Gaps = 20/174 (11%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT-DVKGINKA 92
Q N+ + + NP + R SGVL T DRE+ + +VI T + K A
Sbjct: 2008 QINEPLFYNIINPDS---RFKISPTSGVLSTTGIPFDREQQESFDVVIEVTEEYKPSVVA 2064
Query: 93 ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK- 151
V V V D NDN+P F Y +V ++S V H I V+A D D +
Sbjct: 2065 HIVVKVTVEDVNDNAPFFVNLPYYAVV-----KVDSEVGHV-----IRRVTAVDKDTGRN 2114
Query: 152 --VAYKLAVPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSPSRYA 201
V Y L I P TGE+ L +P + + EY +TV A D P+ A
Sbjct: 2115 GEVHYYLKEHQEHFQIDP-TGEISLKKKFEPDTVNKEYLVTVVAKDGGDPAFSA 2167
Score = 37.4 bits (85), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 17/89 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV-AQYSLVITATDV 86
+ YSI GND F + SK+G++ V+ ++ R+ + + Y+L ++ +D
Sbjct: 2426 LEYSILTGNDQKNFVIN------------SKTGIITVS--NLRRQALKSHYNLNVSVSD- 2470
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVY 115
G+ ++ V + V N +SPVFSQ Y
Sbjct: 2471 -GVFRSSAQVHITVTSANMHSPVFSQNEY 2498
>gi|60279655|ref|NP_001012500.1| protocadherin 15a precursor [Danio rerio]
gi|57471174|gb|AAW50923.1| protocadherin 15a [Danio rerio]
Length = 1796
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 86/185 (46%), Gaps = 45/185 (24%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ GT V GL IL A+++ V YSI GN+ F T +KS
Sbjct: 1052 ENAPIGTPV-GL-ILAAATNTT----VVYSIVSGNEGGVF-------------TVNKSTG 1092
Query: 62 LLVTSGDIDREEVAQY-------SLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQK 113
++ T+ +D E V Y SL + +++ +K T V ++V DEND+ PVFS++
Sbjct: 1093 IIYTNKSLDYENVTSYVLRVQADSLTVILANLRAPSKTNTAKVFINVQDENDHPPVFSRQ 1152
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP-----SNLVVI 165
VY + K F+++ + ATD D K+AY+L +P + VI
Sbjct: 1153 VY----------IGGVTEDTKTFTTVLKIVATDVDTGNYSKMAYRLIIPPTTEGQDSFVI 1202
Query: 166 VPQTG 170
P TG
Sbjct: 1203 EPYTG 1207
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 74/171 (43%), Gaps = 30/171 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y I G+ F L S++ LL+ + +DRE + QY L++TA+D
Sbjct: 653 ITYRIETGDPQEVFNL-------------SRTIGLLLLAKPLDRETIDQYRLIVTASDGH 699
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ V++ + D NDN P F DL N V + +G V ATD
Sbjct: 700 PGGISTATVSIVITDVNDNDPTF----------DLTLPRNLTVREEEANVFVGQVRATDP 749
Query: 148 DG---DKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDV--EYELTVEAHD 193
DG +V Y+L ++L I TG + T P + Y+L VEA D
Sbjct: 750 DGGLNGQVRYRLLSFASLFSI-NSTGS-IFTAVPLDRETRSRYDLIVEASD 798
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVT--VDVLDENDNSPVFSQKVY 115
+ T+ +DRE ++Y L++ A+D ++ T +T V+VLD NDNSPVFSQ VY
Sbjct: 776 IFTAVPLDRETRSRYDLIVEASD-GAVDPRRTTITLLVEVLDINDNSPVFSQPVY 829
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 69 IDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE ++SLVI A G A + + +++LDEN+ +P F Q YR V + SS+
Sbjct: 358 VDRELYQRFSLVIKAEQDNGHPLPAYSKLEIEILDENNQAPYFQQSSYRGFVSE-SSSVG 416
Query: 128 SNVSHWKKFSSIGSVSATDAD 148
+ +S ++ ++ A D D
Sbjct: 417 TTISASANLTAPLAIIALDND 437
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 7/65 (10%)
Query: 55 TESKSGV--LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVF 110
T + SG+ L +DRE Y+L + ATD G+ ++ VTVD+L D NDN+P F
Sbjct: 458 TITTSGITRFLTLLKPVDREIQTNYTLTLVATD--GVQQSR-PVTVDILVIDANDNTPTF 514
Query: 111 SQKVY 115
+Q Y
Sbjct: 515 AQVSY 519
>gi|66773396|ref|NP_001019288.1| protocadherin 1 gamma 18 precursor [Danio rerio]
gi|50881518|gb|AAT85339.1| protocadherin cluster 1 gamma 18 [Danio rerio]
Length = 934
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 20/141 (14%)
Query: 46 PTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVL 101
PT H ++N+ + V +V +DRE+ +SL++TA D ++ T H+ + +L
Sbjct: 175 PTDHFKLNVQNAEDGSKNVEMVLHSPLDREKKNHHSLILTAFDGGKPQRSATLHINIIIL 234
Query: 102 DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLA 157
D NDN+PVFSQ Y+ S V + K + + VSATDAD G + ++ A
Sbjct: 235 DANDNAPVFSQSSYK----------TSIVENAPKSTVVIRVSATDADESSHGIQYYFEHA 284
Query: 158 VPS--NLVVIVPQTGELLLTG 176
P+ L I +G++ +TG
Sbjct: 285 TPTVKALFSIDADSGDVKVTG 305
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 18/185 (9%)
Query: 27 LVRYSITQGNDN-----HTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVI 81
++R S T +++ + F PT + S ++ SG + VT G ID E+ Q+ + +
Sbjct: 262 VIRVSATDADESSHGIQYYFEHATPTVKALF-SIDADSGDVKVT-GQIDYEKHKQFKIKV 319
Query: 82 TATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
A D G+ + + + +DV+D NDN P + + S+++ + + + I
Sbjct: 320 KAKDHGGLTDS-SEIIIDVIDVNDNKP-------KITIMSFSSAVSEDAAPGTVIAMINV 371
Query: 142 VSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSPS 198
D K++ + + S +I T L D D EY +T+ A D +P
Sbjct: 372 QDLDSGDNSKISCSIDLNSPFKIISSLTNYYNLVTDSELDREQTAEYNITITAVDGGNPP 431
Query: 199 RYARE 203
+E
Sbjct: 432 LSIKE 436
>gi|109506480|ref|XP_001055576.1| PREDICTED: protocadherin-3 [Rattus norvegicus]
gi|109507187|ref|XP_001064927.1| PREDICTED: protocadherin-3 [Rattus norvegicus]
gi|149017298|gb|EDL76349.1| rCG49302 [Rattus norvegicus]
Length = 797
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 75/155 (48%), Gaps = 27/155 (17%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
+LVT G +DRE A+Y++ IT +D+ H +TV V D NDN+P F+Q Y V
Sbjct: 401 MLVTEGPLDRENRAEYNITITVSDLGTPRLTTQHTITVQVSDINDNAPAFTQTSYNLFVQ 460
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAY----------KLAVPSNLVVIVPQTG 170
+ NS H IG++SATD+D A+ + S+L+ I P +G
Sbjct: 461 E----NNSPALH------IGTISATDSDSGSNAHITYSLLQLQDQQLALSSLISINPDSG 510
Query: 171 ELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPA 205
+L ++YE +++A D Q + PA
Sbjct: 511 QLFAL-----RALDYE-SLQAFDFQVGATDGGYPA 539
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 70/139 (50%), Gaps = 18/139 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + +L +TA D ++ T V ++V+D NDN+P F + +Y+ + +
Sbjct: 194 LVLDRALDREEQPELTLTLTALDGGAPRRSGTTTVRIEVVDINDNAPQFIRTLYKVQILE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL---AVPSNLVVIVPQTGELLLT 175
S L+ + I +VSATD D KVAY L S VI TGE+ L+
Sbjct: 254 -NSPLD---------TLIVTVSATDLDAGIYGKVAYSLFQGGGDSQPFVIDEITGEIRLS 303
Query: 176 GDPPSDDV-EYELTVEAHD 193
+ +++ Y + + A D
Sbjct: 304 KELDFEEISHYNIEIAATD 322
>gi|24651170|ref|NP_733314.1| cadherin 99C, isoform A [Drosophila melanogaster]
gi|320543453|ref|NP_001189311.1| cadherin 99C, isoform B [Drosophila melanogaster]
gi|23172606|gb|AAF56955.2| cadherin 99C, isoform A [Drosophila melanogaster]
gi|318068893|gb|ADV37401.1| cadherin 99C, isoform B [Drosophila melanogaster]
Length = 1706
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 26/169 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI GND FA+ +SGV++V +DRE + +Y L++ A D
Sbjct: 636 VVYSIISGNDLRQFAVG------------QESGVIIVIR-KLDRESLTRYQLILKAEDTG 682
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G++ + T V + V D ND +P F ++ V K +S+G V ATDA
Sbjct: 683 GLSSSAT-VNIKVTDINDKNPEFEASTLPYVF---------QVEEGKAQASVGVVHATDA 732
Query: 148 D-GDKVAYKLAVPSNLVVIVPQT-GELLLTGDPPSDDV-EYELTVEAHD 193
D G ++P+++ + T GE+L + + + EY+ V A D
Sbjct: 733 DEGINAEITYSIPTDIPFTINATSGEILTAKELDYEQLNEYKFVVTAKD 781
>gi|444713182|gb|ELW54090.1| Protocadherin beta-8 [Tupaia chinensis]
Length = 700
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 77/162 (47%), Gaps = 28/162 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT TD+ H +TV V D NDN+P F+Q Y +V +
Sbjct: 404 LVTERPLDRESQAEYNITITVTDMGTPRLTTEHSITVLVSDVNDNAPAFTQASYTLLVRE 463
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IG++SATDAD +V Y L P ++LV I G+
Sbjct: 464 ----NNSPALH------IGTISATDADAGTNAQVTYSLLPPHDPQLALASLVSINADNGQ 513
Query: 172 LLLTGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWL 209
L S D E +E V A D SP+ ++ +V +
Sbjct: 514 LFALR---SLDYEALRAFEFGVRAADRGSPALSSQALVRVLV 552
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 52 RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVF 110
RN ++ K LV +DRE + L +TA D ++ T V ++V+D NDN+P F
Sbjct: 184 RNRSDGKKYPELVLDKALDREAEPELRLTLTARDGGSPPRSGSTQVYIEVVDVNDNAPEF 243
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVV--- 164
Q YR + + +S + + +VSATDAD ++ Y L S+ +
Sbjct: 244 EQPFYRVQIPE-----DSPIGFL-----VVTVSATDADIGANGEITYSLFQASDEISKTF 293
Query: 165 -IVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
I TGE+ L + ++ YE+ +EA D S S
Sbjct: 294 EINSLTGEIRLKKQVDFEAIQSYEVNIEAKDAGSLS 329
>gi|301753537|ref|XP_002912650.1| PREDICTED: protocadherin beta-7-like [Ailuropoda melanoleuca]
Length = 832
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 103/223 (46%), Gaps = 42/223 (18%)
Query: 37 DNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETH 95
DN F LK PT K+ LVT +DRE A+Y++ IT TD+ K + +
Sbjct: 423 DNLPFLLK-PTF---------KNFYTLVTESPLDRESQAEYNITITVTDLGTPRLKTQHN 472
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KV 152
++V V D NDN+P FSQ Y V + NS H IGSVSATD D +V
Sbjct: 473 LSVTVSDVNDNAPAFSQSSYTLRVRE----NNSPALH------IGSVSATDRDAGANAQV 522
Query: 153 AYKLAVP--------SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYARE 203
Y L +P ++LV I G+L + ++ +E V A D SP+ ++
Sbjct: 523 TYSLLLPPHDPHLPLASLVSINADNGQLFALRALDYEALQAFEFGVRAADRGSPALSSQA 582
Query: 204 PAQVWL---QFNSP-VLQDEQ-----LLQMIDRKSEAPHRIEK 237
+V + N+P VL Q +++ R +EA + + K
Sbjct: 583 LVRVLVVDDNDNAPFVLYPLQNGSAPCTELVPRAAEAGYLVTK 625
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 51 IRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPV 109
+R+S E LV +DREEV + L +TA D ++ T + + VLD NDN P
Sbjct: 218 VRDSGEGNVYPELVLDRVLDREEVPELILTLTALDGGSPPRSGNTLIRILVLDINDNVPE 277
Query: 110 FSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVV-- 164
F + +Y+ V + NS V S + +VSA D D ++ Y + +++
Sbjct: 278 FVESLYKVQVPE-----NSPVG-----SLVVTVSARDLDAGSNGEIVYAFFYATEIILKT 327
Query: 165 --IVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
I +G L L + ++ Y LT++A D
Sbjct: 328 FRINSTSGNLHLKAKLNYEAIQTYTLTIQAKD 359
>gi|14195605|ref|NP_066008.1| protocadherin beta-16 precursor [Homo sapiens]
gi|308153560|sp|Q9NRJ7.3|PCDBG_HUMAN RecName: Full=Protocadherin beta-16; Short=PCDH-beta-16; AltName:
Full=Protocadherin-3X; Flags: Precursor
gi|13876376|gb|AAK21988.1| protocadherin beta 8a [Homo sapiens]
gi|119582379|gb|EAW61975.1| protocadherin beta 16 [Homo sapiens]
gi|193786434|dbj|BAG51717.1| unnamed protein product [Homo sapiens]
Length = 776
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ +T TD+ K E ++TV + D NDN+P F+Q Y V +
Sbjct: 403 LVTERALDREARAEYNITLTVTDMGTPRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGH 512
Query: 172 LLLTGDPPSDDV-EYELTVEAHDLQSPS 198
L + + E+E V A D SP+
Sbjct: 513 LFALRSLDYEALREFEFRVSATDRGSPA 540
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 22/154 (14%)
Query: 49 HEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNS 107
HE R+ + LV ++DREE Q L +TA D ++ T V ++V+D NDN+
Sbjct: 183 HEFRDGRKYPE---LVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNA 239
Query: 108 PVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP----S 160
P F Q +Y+ + + NS + S + +VSA D DG K++Y L P S
Sbjct: 240 PEFEQPIYKVQIPE-----NSPLG-----SLVATVSARDLDGGANGKISYTLFQPSEDIS 289
Query: 161 NLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHD 193
+ + P TGE+ L + V YE+ ++A D
Sbjct: 290 KTLEVNPMTGEVRLRKQVDFEMVTSYEVRIKATD 323
>gi|71725377|ref|NP_001025159.1| protocadherin Fat 2 precursor [Mus musculus]
gi|81888837|sp|Q5F226.1|FAT2_MOUSE RecName: Full=Protocadherin Fat 2; AltName: Full=FAT tumor
suppressor homolog 2; Flags: Precursor
gi|148701548|gb|EDL33495.1| mCG1445 [Mus musculus]
Length = 4351
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 82/184 (44%), Gaps = 29/184 (15%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS T V+ P+ + PH +V+Y I G+ F + +R T+S
Sbjct: 44 ENSAPKTYVES-PVKMGMYLAEPHWVVKYRIISGDAAGVFKTEEHVVGNFCFLRIRTKSS 102
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ LL +RE Y+LV+ A+D +A T V V +LD+ND P+FS YRF
Sbjct: 103 NTALL------NREVRDSYTLVVQASDKSLEFEALTQVVVHILDQNDLKPLFSPPSYRFT 156
Query: 119 VGD---LKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGEL 172
+ + LK S I V+ATDAD + A Y S + I P +G +
Sbjct: 157 ISEDRPLK-------------SPICKVTATDADLGQNAEFYYAFNARSEVFAIHPTSGVV 203
Query: 173 LLTG 176
+ G
Sbjct: 204 TVAG 207
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 102/223 (45%), Gaps = 29/223 (13%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G PIL+ S+ V Y + +GN N F++ S SG L+ T +D
Sbjct: 1676 GSPILLISAASSSD--VTYELREGNKNSVFSMN------------SYSG-LISTQKRLDH 1720
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E+V+ Y L I +++ G+ E V ++DENDN+P F + + VG + + +
Sbjct: 1721 EKVSSYQLKIRGSNMAGV-FTEVVALVYIIDENDNAPAFLKSTF---VGHISEAAPLHSL 1776
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDVE-Y 185
+ +S + A+D+D + + YK+ P L I P G L +T + + +
Sbjct: 1777 ILGEDNSPLVIRASDSDQEANSLLVYKILEPEALKFFKIDPSMGTLTITSELDYETTPLF 1836
Query: 186 ELTVEAHDLQSPSRYAREPAQVWLQF----NSPVLQDEQLLQM 224
+ ++ HD +P +A A+V + +SP EQ+ ++
Sbjct: 1837 QFSIYVHDQGTPILFAPRSARVIIHVRDVNDSPPRFSEQIYEV 1879
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 82/176 (46%), Gaps = 28/176 (15%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+EN++ G V L L A + Q+ Y IT+G+ F++ E R
Sbjct: 2918 VENNEPGELVATLKTLDADISEQNRQVTCY-ITEGDPLGQFSISQ-VGDEWR-------- 2967
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+ + +DRE +A+Y L ITA+D G +A V V VLD NDNSP SQ +Y G
Sbjct: 2968 --ITSRKTLDREHIAKYLLRITASD--GKFQASVPVEVFVLDINDNSPQCSQLLY---TG 3020
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-SNLVVIVPQTGEL 172
++ + H+ I VSA D D D ++ Y L P + + P TGEL
Sbjct: 3021 KVREDVTPG--HF-----ILKVSAIDVDMDTNAQITYSLHGPGAQEFKLDPHTGEL 3069
Score = 43.9 bits (102), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 84/172 (48%), Gaps = 28/172 (16%)
Query: 41 FALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDV 100
+ALK P++ +++G L+ T+ +D E QY L + + + +A T V +D+
Sbjct: 395 YALK-PSSGSTVFKLNARTG-LITTTKPVDFHEQNQYQLHVKTS----LGQATTTVIIDI 448
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDK--VAYKLA 157
+D N+++PVF++ Y + +L+ N+ +S+ +V+ATD D GD + Y +A
Sbjct: 449 VDCNNHAPVFNRSSY-------EGTLDENI---PPGTSVLTVTATDQDHGDNGHITYSIA 498
Query: 158 VPSNL-VVIVPQTGELLLTGDPPSDDVE-----YELTVEAHDLQSPSRYARE 203
P + I P G + T S D E Y V A D SP R +E
Sbjct: 499 GPKAVPFSIDPYLGVISTTK---SMDYELMKRIYTFRVRASDWGSPFRQEKE 547
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
+T+ K+GVL VT G +D E ++ + ATD + +E V V V D NDN P FSQ
Sbjct: 2217 TTDFKTGVLTVT-GPLDYESKNKHVFTVRATDTALGSFSEATVEVLVEDINDNPPTFSQL 2275
Query: 114 VY 115
VY
Sbjct: 2276 VY 2277
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 76/172 (44%), Gaps = 24/172 (13%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
H + Y I GN+ F + E ++G+L V + +D E + Y L +T
Sbjct: 747 HGRLVYVIADGNEEGCFDI------------ELETGLLTVAAA-LDYETTSFYVLNVTVY 793
Query: 85 DVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D+ K+ +TV V D ND P F Y+ + + + + + V+ K
Sbjct: 794 DLGTPPKSSWKLLTVTVKDWNDKPPRFPPGGYQLTISE-DTEVGTTVAELK-------TR 845
Query: 144 ATDA-DGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD-DVEYELTVEAHD 193
TD+ D +V Y L P+ + P TGEL++TG + + +Y L EA D
Sbjct: 846 DTDSEDNGRVRYTLLTPTEKFSLHPLTGELVVTGQLDRESEPQYILKAEARD 897
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 42/89 (47%), Gaps = 18/89 (20%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQK------- 113
LL T+ +DRE +Y L +T D ++ + V V VLD NDNSP+FS K
Sbjct: 1193 LLSTAKQLDRENKDEYVLEVTVQDNGDPPLRSTSRVVVCVLDVNDNSPMFSHKLFNVRLS 1252
Query: 114 ----------VYRFIVGDLKSSLNSNVSH 132
VYR + D LN ++++
Sbjct: 1253 ERLSPLSPEPVYRLVASDPDEGLNGSITY 1281
>gi|443690606|gb|ELT92691.1| hypothetical protein CAPTEDRAFT_219637 [Capitella teleta]
Length = 1103
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 65/114 (57%), Gaps = 16/114 (14%)
Query: 50 EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV--KGINKAET-HVTVDVLDENDN 106
E+RN+T+ + L +DRE A YS+V+TA D +G K+ T + V+V+D NDN
Sbjct: 186 EVRNNTDGSFDLRLTLIKGLDRETQASYSMVVTAYDGGDRGQKKSGTLQIKVNVVDANDN 245
Query: 107 SPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLA 157
SPVF Q+VY +SS++ +V ++I V ATD D D+ + Y L+
Sbjct: 246 SPVFDQEVY-------ESSVSEDVPSG---TTITRVHATDLDIDRNGQIVYSLS 289
>gi|297460978|ref|XP_002701391.1| PREDICTED: protocadherin-16 [Bos taurus]
Length = 3296
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 76/160 (47%), Gaps = 19/160 (11%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+ G L +G +D E+ +Y L + A D G ++ + ++TV V D NDNSP FSQ +Y+
Sbjct: 2324 RYGGRLSLTGPLDFEQRDRYHLQLLAHD--GPHEGQANLTVFVEDVNDNSPAFSQTLYQV 2381
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLL 174
++ + H S+I SVSATD D V+Y LA + I P G L
Sbjct: 2382 ML----------LEHTPPGSAILSVSATDRDSGANGHVSYHLASSAEGFSIDPNNGTLFT 2431
Query: 175 TGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWLQ 210
T + E ++ +EA D P R AR V LQ
Sbjct: 2432 TVGTVALGHEGPGMVDVVLEARDHGVPVRAARATVHVQLQ 2471
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVIT 82
H V YSI GN F L+ P E S L LV +D E + QY+L +
Sbjct: 2513 HAAVDYSIVSGNRGRVFQLE-PRLAEAGESDGLGPRALGCLVLLEPLDFESLTQYNLTVA 2571
Query: 83 ATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
ATD + + VTV VLD NDN PVF++ YR V
Sbjct: 2572 ATDRGQPPRSSAVPVTVSVLDVNDNPPVFTRAAYRVAV 2609
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 6/135 (4%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE Y L++ D ++ T V + VLD NDNSP F Q G L +
Sbjct: 1167 LDRERQNSYQLLVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTFLQ-ASGAAGGGLPIQVP 1225
Query: 128 SNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGELLLTGDP--PSDDVE 184
V +++ + + + + Y L P S L + P +GE LLT P ++
Sbjct: 1226 DGVPPGTLVTTLQAKDPDEGENGTILYMLTGPGSELFSLHPHSGE-LLTAAPLIRAERPH 1284
Query: 185 YELTVEAHDLQSPSR 199
Y LT+ AHD SP R
Sbjct: 1285 YVLTLSAHDQGSPPR 1299
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 25/131 (19%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LVR++++ G+ F L + SG L + +D E A++ LV+ A
Sbjct: 2631 PHGLVRFTLSSGDPLGLFEL------------DESSGDLRLAR-PLDCETQARHQLVVQA 2677
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
+D G++ A VT++V D ND+ P F + L +SL N +++ ++
Sbjct: 2678 SDPAGVHFALAPVTIEVQDVNDHGPAFPLSL-------LSTSLAENQPPGTLVTTLHAI- 2729
Query: 144 ATDADGDKVAY 154
DGD A+
Sbjct: 2730 ----DGDAGAF 2736
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 404 EGGEGH-FAL----------STQDSVIYLVCVARRLDREERDAYNLRVTATDSGSPPLRA 452
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + V D NDN+P F +++YR
Sbjct: 453 EAAFVLHVTDVNDNAPAFDRQLYR 476
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 100/267 (37%), Gaps = 41/267 (15%)
Query: 43 LKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDV 100
L P++ E+R +T +DRE+ Y+ + A D T VT+ V
Sbjct: 1901 LLEPSSGELRTATT------------LDREQCPSYAFTVNAVDSAAAGPLSTTVPVTITV 1948
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLA-VP 159
D ND++P F R + ++ + + + +A + Y+LA P
Sbjct: 1949 RDVNDHAPTFPTSPLRLRLPRPGPVFSTPILPLATLRAEDRDTGANA---SILYRLAGTP 2005
Query: 160 SNLVVIVPQTGELLLTGDP----PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPV 215
+ TGE+ ++ P P D V L + A DL P+R A + LQ S
Sbjct: 2006 PPGTTVDSYTGEIRVSRSPVSLSPRDRV---LFIVATDLGRPARSATGVVIIGLQGES-- 2060
Query: 216 LQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREK 275
E + SEA R T V P K I G G I +++ E+
Sbjct: 2061 ---EHGPRFSRASSEAMLRENAPPGTPVVSP-KAIHA----GGSSGPITYSILSGNEKGT 2112
Query: 276 FKIRDENPWITVDENGDVRVKKRWDFE 302
F I+ IT VR + DFE
Sbjct: 2113 FSIQPSTGAIT------VRSAEGLDFE 2133
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHV-TVDVLDENDNSPVFSQKVYRFIV 119
+DRE+ A+Y L + A+D ++ T + TV V D ND +P F Q+ Y ++
Sbjct: 1605 LDREQRAEYVLTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEYSVLL 1656
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ TF L E R + LV +G++DRE + Y L + A D
Sbjct: 178 YALSGDGAGETFRL------ETRPGPDGAPVPELVVTGELDRENRSHYMLQLEAYDGGSP 231
Query: 90 -NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+A+ + V +LD ND++P F+Q Y V
Sbjct: 232 PRRAQALLDVTLLDINDHAPAFNQSRYHAAV 262
>gi|350581201|ref|XP_003480986.1| PREDICTED: protocadherin beta-10-like [Sus scrofa]
Length = 561
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 21/122 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LV+ +DRE A+Y++ I+ +D+ + H +TV V D NDN+P FSQ Y V +
Sbjct: 403 LVSESGLDRETQAEYNITISVSDLGTPRRHTQHNLTVRVADVNDNAPAFSQPAYTLRVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H +G+V ATDAD ++ Y L PS+ LV I P TG+
Sbjct: 463 ----NNSPALH------VGTVRATDADAGANAQLTYSLLPPSDPHLPLASLVAINPDTGQ 512
Query: 172 LL 173
L
Sbjct: 513 LF 514
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYR 116
LV +DRE+ + SL +TA D ++ T + + VLD NDN+P FSQ +Y+
Sbjct: 194 LVLDRALDREKQPELSLTLTALDGGSPPRSGTTAIRIVVLDVNDNAPRFSQAIYK 248
>gi|62088366|dbj|BAD92630.1| protocadherin beta 5 precursor variant [Homo sapiens]
Length = 796
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 54/103 (52%), Gaps = 14/103 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTQRTLDRESQAEYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN 161
NS H IGSVSATD D +V Y L P N
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQN 495
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 46/98 (46%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + SL +TA D ++ T + + VLD NDN+P F Q Y V +
Sbjct: 195 LVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSFYEVQVPE 254
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
S LNS V VSA D D VAY L
Sbjct: 255 -NSPLNSLVV---------VVSARDLDAGAYGSVAYAL 282
>gi|54650730|gb|AAV36944.1| LP14319p [Drosophila melanogaster]
Length = 1691
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 26/169 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI GND FA+ +SGV++V +DRE + +Y L++ A D
Sbjct: 621 VVYSIISGNDLRQFAVG------------QESGVIIVIR-KLDRESLTRYQLILKAEDTG 667
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G++ + T V + V D ND +P F ++ V K +S+G V ATDA
Sbjct: 668 GLSSSAT-VNIKVTDINDKNPEFEASTLPYVF---------QVEEGKAQASVGVVHATDA 717
Query: 148 D-GDKVAYKLAVPSNLVVIVPQT-GELLLTGDPPSDDV-EYELTVEAHD 193
D G ++P+++ + T GE+L + + + EY+ V A D
Sbjct: 718 DEGINAEITYSIPTDIPFTINATSGEILTAKELDYEQLNEYKFVVTAKD 766
>gi|449511796|ref|XP_002199166.2| PREDICTED: protocadherin beta-5-like, partial [Taeniopygia guttata]
Length = 485
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 53/106 (50%), Gaps = 15/106 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHV-TVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DREE QY L +TA D T TVD+ D NDN+PVF+Q Y V +
Sbjct: 270 LVTVSALDREETPQYILSVTAADAGSPPLTSTQTFTVDISDVNDNAPVFNQTSYTMYVHE 329
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVV 164
++++ +G+VSA DAD KV Y L P + +
Sbjct: 330 TRATV-----------FVGAVSAGDADVGLNAKVTYSLLPPQHCAL 364
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 41/222 (18%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYR 116
K + LV +DREE A+ + A D ++ THV + +LD NDN+P+F+Q+ Y
Sbjct: 55 KKSLELVLEKPLDREEHAEMGFSVIALDGGSPPRSGTTHVKIFILDVNDNAPIFTQEEY- 113
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVP----SNLVVIVPQ 168
+ + + + S + +V ATD D GD + Y+L+ + +I P
Sbjct: 114 ---------IAQVLENMPEGSVVLTVLATDQDAGVNGD-ITYQLSQAVGKSDSAFLIDPI 163
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAR-----------EPAQVWLQFNSPVL 216
TG + LT + E +E++V A D S + P V F+SP+
Sbjct: 164 TGAIKLTKPLDFEAAESHEMSVRATDGGGLSAICKVLVEVVDVNDNAPELVVSSFSSPIP 223
Query: 217 QDE------QLLQMIDRKSEAPHRIE---KRRVTRAVRPTKR 249
++ L + DR S A +I + +++ ++RP +
Sbjct: 224 ENTVPGTVVALFSVRDRDSGANGKISCALEDQLSFSLRPAYK 265
>gi|7661662|ref|NP_056484.1| protocadherin beta-5 precursor [Homo sapiens]
gi|13431375|sp|Q9Y5E4.1|PCDB5_HUMAN RecName: Full=Protocadherin beta-5; Short=PCDH-beta-5; Flags:
Precursor
gi|5457045|gb|AAD43759.1|AF152498_1 protocadherin beta 5 [Homo sapiens]
gi|14009469|gb|AAK51620.1|AF217753_1 protocadherin-beta5 [Homo sapiens]
gi|33150746|gb|AAP97251.1|AF134474_1 protocadherin [Homo sapiens]
Length = 795
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 54/103 (52%), Gaps = 14/103 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 402 LVTQRTLDRESQAEYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN 161
NS H IGSVSATD D +V Y L P N
Sbjct: 462 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQN 494
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 46/98 (46%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + SL +TA D ++ T + + VLD NDN+P F Q Y V +
Sbjct: 194 LVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSFYEVQVPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
S LNS V VSA D D VAY L
Sbjct: 254 -NSPLNSLVV---------VVSARDLDAGAYGSVAYAL 281
>gi|301753545|ref|XP_002912601.1| PREDICTED: protocadherin beta-4-like [Ailuropoda melanoleuca]
Length = 796
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 103/223 (46%), Gaps = 42/223 (18%)
Query: 37 DNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETH 95
DN F LK PT K+ LVT +DRE A+Y++ IT TD+ K + +
Sbjct: 386 DNLPFLLK-PTF---------KNFYTLVTESPLDRESQAEYNITITVTDLGTPRLKTQHN 435
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KV 152
++V V D NDN+P FSQ Y V + NS H IGSVSATD D +V
Sbjct: 436 LSVTVSDVNDNAPAFSQSSYTLRVRE----NNSPALH------IGSVSATDRDAGANAQV 485
Query: 153 AYKLAVP--------SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYARE 203
Y L +P ++LV I G+L + ++ +E V A D SP+ ++
Sbjct: 486 TYSLLLPPHDPHLPLASLVSINADNGQLFALRALDYEALQAFEFGVRAADRGSPALSSQA 545
Query: 204 PAQVWL---QFNSP-VLQDEQ-----LLQMIDRKSEAPHRIEK 237
+V + N+P VL Q +++ R +EA + + K
Sbjct: 546 LVRVLVVDDNDNAPFVLYPLQNGSAPCTELVPRAAEAGYLVTK 588
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 20/123 (16%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L +Y+I+ + H RN ++ K LV +DREE ++SL +TA D
Sbjct: 166 LQKYTISPNSHFHVLT---------RNHSDGKKYPDLVQDKALDREERPEFSLTLTALDG 216
Query: 87 KGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
K+ T V + ++D NDN+P F Y+ V + NS + S + SVSA
Sbjct: 217 GSPPKSGTTTVRILIMDVNDNAPEFVHTPYKVRVLE-----NSPLG-----SPVLSVSAR 266
Query: 146 DAD 148
D D
Sbjct: 267 DVD 269
>gi|426350305|ref|XP_004042719.1| PREDICTED: protocadherin beta-6 [Gorilla gorilla gorilla]
Length = 842
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 87/186 (46%), Gaps = 30/186 (16%)
Query: 30 YSITQGNDNHT----FALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
+S++ + H +++N +R S E+ LVT G +DRE A+Y++ IT TD
Sbjct: 414 FSVSDADSGHNQQVICSIENNLPFLLRPSVENF--YTLVTEGALDRESRAEYNITITVTD 471
Query: 86 VKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+ K + +TV V D NDN+P F+Q Y V + NS H IGSVSA
Sbjct: 472 LGTPRLKTQQSLTVQVSDFNDNAPTFTQTSYTLFVRE----NNSPALH------IGSVSA 521
Query: 145 TDADGD---KVAYKLAVPS--------NLVVIVPQTGELLLTGDPPSDDVE-YELTVEAH 192
TD D +V Y L +PS +LV I G L + ++ +E V A
Sbjct: 522 TDRDSGINAQVTYSL-LPSQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGAT 580
Query: 193 DLQSPS 198
D SP+
Sbjct: 581 DRGSPA 586
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 12/91 (13%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
L RY+I+ NP H + RN +E + LV +DREE Q L + A D
Sbjct: 214 LQRYTIS----------SNPHFHVLTRNRSEGRKFPELVLDKPLDREEQPQLRLTLIALD 263
Query: 86 VKGINKAET-HVTVDVLDENDNSPVFSQKVY 115
++ T + + VLD NDN P F+Q++Y
Sbjct: 264 GGSPPRSGTSEIQIQVLDINDNVPEFAQELY 294
>gi|410925628|ref|XP_003976282.1| PREDICTED: protocadherin alpha-8-like [Takifugu rubripes]
Length = 808
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 80/159 (50%), Gaps = 22/159 (13%)
Query: 50 EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSP 108
E+R+ E +LV +DRE A +SLV+TA D K + ++ V VLD NDN+P
Sbjct: 182 EVRDKGEDGKIPILVLQKSLDRETAASHSLVLTALDGGKPPKSGQMNILVKVLDVNDNTP 241
Query: 109 VFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL--AVPSN-- 161
VFS+ VY + + + S++ V+ATD D +V+Y +V +N
Sbjct: 242 VFSKDVYSVTLPE----------NAPLGSAVVQVNATDLDEGQNGEVSYSFGNSVSNNIF 291
Query: 162 -LVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSP 197
L I P TGE+ + G D D +YE+ +EA D P
Sbjct: 292 QLFGINPSTGEITVKGLIDYEQKD-KYEIEIEASDKGLP 329
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE+ +Y L ITA D + +E +TV V D NDN P FS Y F + +
Sbjct: 409 LVTKSALDREQRDKYDLTITAKDAGQPSLSSEKTITVVVSDVNDNRPEFSLSPYTFYISE 468
>gi|9965298|gb|AAG10032.1|AF282973_3 protocadherin-beta9 [Homo sapiens]
Length = 536
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 61/123 (49%), Gaps = 21/123 (17%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ IT TD+ K E +T+ V D NDN+P F+Q Y V
Sbjct: 402 ILMTEGALDRESKAEYNITITVTDMGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVR 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 462 E----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNG 511
Query: 171 ELL 173
L
Sbjct: 512 HLF 514
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + SL +TA D +++ T + + VLD NDN+P F+Q +Y +
Sbjct: 194 LVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALY-----E 248
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVV----IVPQTGELLL 174
++ NS V S I VSA DAD +V+Y S ++ I P +GE+ L
Sbjct: 249 TQAPENSPVG-----SLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFL 303
>gi|12654693|gb|AAH01186.1| Protocadherin beta 5 [Homo sapiens]
gi|119582383|gb|EAW61979.1| protocadherin beta 5 [Homo sapiens]
gi|123981940|gb|ABM82799.1| protocadherin beta 5 [synthetic construct]
gi|123996771|gb|ABM85987.1| protocadherin beta 5 [synthetic construct]
gi|168277620|dbj|BAG10788.1| protocadherin beta 5 precursor [synthetic construct]
Length = 795
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 54/103 (52%), Gaps = 14/103 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 402 LVTQRTLDRESQAEYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN 161
NS H IGSVSATD D +V Y L P N
Sbjct: 462 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQN 494
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 46/98 (46%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + SL +TA D ++ T + + VLD NDN+P F Q Y V +
Sbjct: 194 LVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSFYEVQVPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
S LNS V VSA D D VAY L
Sbjct: 254 -NSPLNSLVV---------VVSARDLDAGAYGSVAYAL 281
>gi|324499482|gb|ADY39779.1| Cadherin-related tumor suppressor [Ascaris suum]
Length = 3652
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 115/258 (44%), Gaps = 47/258 (18%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
SG++ + S IDRE ++Y+L + A D G+ + T +T+ +LD+NDN+P+F++ ++F
Sbjct: 2735 SGIVTLIS-HIDRETQSEYALNVRAMD--GVWQVRTSLTITILDQNDNAPIFTRDHFKFF 2791
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDK--VAYKLAVPSNLVVIVPQTGELLLT 175
V V++ S +G + A DAD GD V Y L + + P +G L++
Sbjct: 2792 V----------VNNAAVDSIVGRIEARDADSGDNGVVFYSLRCAQDRFTVDPSSG--LIS 2839
Query: 176 GDPPSDDVEYELTV---EAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
P + E+ + EA D P+ A ++ + N V+ + DR+ P
Sbjct: 2840 LSIPLGNYTNEVFMCEAEAIDGGMPALAAMATVEIIIVGNKIVVP-----RFADRR---P 2891
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGD 292
+ F+ G G ++ L+ E ++ + +DENG
Sbjct: 2892 Y------------------FALLAGSPNGTVIGQLKTEPPTYYMRVLVYDDRFAIDENGT 2933
Query: 293 VRVKKRWDFEELGPEKTI 310
+ + ++ E+G T+
Sbjct: 2934 LSTRSKFPTSEIGRSITL 2951
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 64/139 (46%), Gaps = 24/139 (17%)
Query: 65 TSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
T+ +DRE A Y+L + D G AE ++T++V D NDN+P+ + Y
Sbjct: 1111 TTAWLDRELCATYNLTVIIKDGGG-RLAECNITIEVEDVNDNAPIMKAEFY--------- 1160
Query: 125 SLNSNVSHWKKF---SSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDP 178
H++ F SIG VSA D D ++ Y L + + + +GEL G+
Sbjct: 1161 -------HFEAFLTKHSIGFVSAIDRDQGVNAEITYSLVRRTTHIKVDAASGELSHDGEI 1213
Query: 179 PSDDVEYELTVEAHDLQSP 197
+ V Y LT+ A D P
Sbjct: 1214 EAGKV-YNLTIVATDQGQP 1231
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 69/141 (48%), Gaps = 21/141 (14%)
Query: 69 IDREEVAQYSLVITATDVKGINK---AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+DRE A++ L+IT TD + +K A T +TV+V+D NDN+P F F+ ++
Sbjct: 1917 LDRESSAKHVLLITVTDQRPPHKVFSASTTLTVNVIDVNDNAPTFISSNTFFVFEEVPLG 1976
Query: 126 LNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL---AVPSNLVVIVPQTGELLLTGDPP 179
+ +G V A DAD +V Y++ + P L ++ P G + + G
Sbjct: 1977 -----------TLVGIVVAIDADFGNNAQVQYRIIPVSHPEALFIVDPILGYIQVNGRVD 2025
Query: 180 SD-DVEYELTVEAHDLQSPSR 199
+ + LT+EA D SP R
Sbjct: 2026 REKKAIHHLTIEASDGGSPIR 2046
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 15/90 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y+I QG D FA+ +S+SG + V + +D EE A+Y+L + A D+
Sbjct: 2207 ISYAIVQG-DTSLFAI------------DSQSGQMFVKAA-LDYEECAEYNLKVQAIDMG 2252
Query: 88 GIN-KAETHVTVDVLDENDNSPVFSQKVYR 116
A H+TV V D NDN P+F YR
Sbjct: 2253 TPRLSATVHITVIVEDINDNDPIFELPYYR 2282
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 61/114 (53%), Gaps = 19/114 (16%)
Query: 51 IRNSTESKSGVLLV-TSGDIDREEVAQYSLVITATDVKGINK---AETHVTVDVLDENDN 106
+R+++ S VLL+ + +DRE+ Y + ++A+D G N + V V+VLD NDN
Sbjct: 167 VRSTSHSGDDVLLLELTESLDREQKDLYVVNVSASD--GGNPPRFGYSTVLVNVLDANDN 224
Query: 107 SPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA 157
+PVF Q Y S +H + ++I +V A+DAD ++ Y+L+
Sbjct: 225 APVFEQSHYE----------ASVTAHPGQRAAIITVEASDADVGENARILYRLS 268
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 51/112 (45%), Gaps = 14/112 (12%)
Query: 5 KSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLV 64
K G K + ASS ++Y I G+ F++ NP T + L
Sbjct: 2487 KEGEAEKLITTFAASSSNISSYGIQYGIAGGDPFSDFSI-NPHTGQ------------LF 2533
Query: 65 TSGDIDREEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQKVY 115
T G ID E +Y L+I+ATD A T + V+V D NDN P+F Q +Y
Sbjct: 2534 TRGTIDYERRRRYRLLISATDQHNHPLVAFTSIVVNVEDVNDNRPIFDQILY 2585
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 42/91 (46%), Gaps = 16/91 (17%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+ YSI + TFA+K T +V +DRE +Y L I A+D
Sbjct: 583 LISYSIIDNSSRRTFAIKEKTGE-------------IVLRRVLDREYQHRYVLTIRASD- 628
Query: 87 KGINK--AETHVTVDVLDENDNSPVFSQKVY 115
G + + T V V+VLD NDN P F Q Y
Sbjct: 629 NGYPRRSSTTQVIVNVLDINDNRPHFLQDEY 659
>gi|62087498|dbj|BAD92196.1| protocadherin beta 9 precursor variant [Homo sapiens]
Length = 716
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ IT TD+ K E +T+ V D NDN+P F+Q Y V
Sbjct: 321 ILMTEGALDRESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVR 380
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN 161
+ NS H IGSVSATD D +V Y L P +
Sbjct: 381 E----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQD 414
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 18/120 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +D EE + SL +TA D +++ T + + VLD NDN P F+Q +Y +
Sbjct: 113 LVLDKALDGEEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNVPQFAQALY-----E 167
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVV----IVPQTGELLL 174
++ NS V S I VSA DAD +V+Y S ++ I P +GE+ L
Sbjct: 168 TQAPENSPVG-----SLIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPFSGEIFL 222
>gi|410036931|ref|XP_001146508.3| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Pan troglodytes]
Length = 3087
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 80/280 (28%), Positives = 117/280 (41%), Gaps = 53/280 (18%)
Query: 42 ALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDV 100
AL N + E+ S + +SG L+ T+ +DRE + ++ L +TA D A T V V V
Sbjct: 366 ALMNSRSLELF-SIDPQSG-LIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTV 423
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLA 157
D ND+SPVF Q YR +L NV ++ I + ATD D A Y+
Sbjct: 424 ADRNDHSPVFEQAQYR-------ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFV 473
Query: 158 VPSNLVV-------IVPQTGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVW 208
P I P++G + +G + +E YEL VEA D Q P P
Sbjct: 474 GPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSAT 528
Query: 209 LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGR 262
++ + VL D AP EKR V + VRP R+ ++ D + G
Sbjct: 529 VRVHITVL---------DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGL 579
Query: 263 IVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ + + R F I G+++V DFE
Sbjct: 580 VHYNIISGNSRGHFAID--------SLTGEIQVVAPLDFE 611
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 489 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 547
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 548 KRY---VAQVREDV-------RPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDS 597
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 598 LTGEIQVVA--PLDFEAEREYALRIRAQDAGRP 628
Score = 41.2 bits (95), Expect = 0.69, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 80/179 (44%), Gaps = 30/179 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 1078 ENSIVGSVVA--QITAVDPDEGPNAHIMYQIVEGNIPELFQM------------DIFSGE 1123
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIV 119
L D+D E +Y +V+ AT +++A H+ + +D+NDNSPV + Q ++ V
Sbjct: 1124 LTALI-DLDYEARQEYVIVVQATSAPLVSRATVHIRL--VDQNDNSPVLNNFQILFNNYV 1180
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
+ + S + IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1181 SNRSDTFPSGI--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1231
Score = 41.2 bits (95), Expect = 0.72, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y
Sbjct: 711 SGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHL------- 763
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
LN + + +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 764 RLNEDAA---VGTSVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLD 820
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 821 YKQERYFKLVLTASD 835
Score = 40.8 bits (94), Expect = 0.90, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 88/218 (40%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 981 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1028
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V+ Y L A D +G+ T V++ V+ D NDN+PVF + + V + NS V
Sbjct: 1029 AVSVYELTAYAVD-RGVPPLRTPVSIQVMVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1082
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1083 G-----SVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1137
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 1138 YVIVVQATSAPLVSRATVHIRLVDQNDNSPVLNNFQIL 1175
Score = 40.8 bits (94), Expect = 0.93, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 565 LRVTATDRDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVVA-PLDFE 611
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y+L I A D ++ ++ V+D ND+ P+F ++ V + + L +V
Sbjct: 612 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLE-NAPLGHSV 670
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKLA--VPSNLVVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L P VI TG + ++G + VE Y
Sbjct: 671 IH------IQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYFF 724
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 725 GVEARDHGSP 734
Score = 38.5 bits (88), Expect = 4.3, Method: Composition-based stats.
Identities = 49/164 (29%), Positives = 68/164 (41%), Gaps = 21/164 (12%)
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+D E+ Y+L ITA D KA+T +V V V D NDN+P F Y +V +
Sbjct: 919 LDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSE------ 972
Query: 128 SNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN---LVVIVPQTGELLLTGDPPSD 181
F+S+ +SATD D +V Y + I P +G + +
Sbjct: 973 ----DAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDRE 1028
Query: 182 DVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQL 221
V YELT A D P QV +Q N+PV E+
Sbjct: 1029 AVSVYELTAYAVDRGVPPLRTPVSIQVMVQDVNDNAPVFPAEEF 1072
Score = 37.7 bits (86), Expect = 6.5, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ GT V + V + + + + Y IT GN + FA+ ++ GV
Sbjct: 767 EDAAVGTSV----VSVTAVDRDANSAISYQITGGNTRNRFAI------------STQGGV 810
Query: 62 LLVTSG-DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +D ++ + LV+TA+D + ++ +V +++ D N + PVF Y V
Sbjct: 811 GLVTLALPLDYKQERYFKLVLTASD-RALHD-HCYVHINITDANTHRPVFQSAHYSVSVN 868
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPP 179
+ + S+I +SA+D D G+ + NL +T P
Sbjct: 869 EDRPV----------GSTIVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAP 918
Query: 180 ---SDDVEYELTVEAHDLQSPSR 199
D V Y L + A D P +
Sbjct: 919 LDYEDQVTYTLAITARDNGIPQK 941
>gi|426256282|ref|XP_004021770.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1 [Ovis aries]
Length = 4588
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 25/206 (12%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G+ V H V Y I GN F + NP + I +T +D
Sbjct: 1681 GVGSFVGMVTAHSQSSVVYEIKDGNVADAFDI-NPHSGSI------------ITRKALDF 1727
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E + Y+L I T++ G++ T V V +LDENDN PVF Q Y ++ + +S+NS V
Sbjct: 1728 ETLPIYTLTIQGTNMAGLSTNAT-VLVHLLDENDNLPVFMQAEYTGLISE-SASINSVVL 1785
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVE 184
+ + + ATDAD + + Y + PS I TG + +L+ D +
Sbjct: 1786 TDRNVPLV--IRATDADKESNALLVYHIVEPSVHKYFTIDSSTGAIHTVLSLD-YEETST 1842
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQ 210
+ TV+ HD+ +P +A A V +
Sbjct: 1843 FHFTVQVHDMGTPRLFAEYAANVTIH 1868
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 93/201 (46%), Gaps = 32/201 (15%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + YSI GN++ F++ +SK+G + + +
Sbjct: 3246 GTEVLQVYAASRDIEANAEITYSIISGNEHGKFSI------------DSKTGAIFIIE-N 3292
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L + ATD ++ T V+++V D NDN+PVFSQ Y +V + + L
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVAT-VSINVTDINDNTPVFSQDTYTAVVSE-DAVL 3350
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
S+ +V A DADG + Y + + I P GE+ +T +
Sbjct: 3351 E---------QSVITVMADDADGPSNSHIHYAIIDGNQGSPFTIDPARGEVKVTKLLDRE 3401
Query: 182 DVE-YELTVEAHDLQSPSRYA 201
+ Y LTV+A D SP R A
Sbjct: 3402 TISGYTLTVQASDNGSPPRVA 3422
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + +P +RY I G++ + F + + +R T+
Sbjct: 45 ENSAAKTYV-GHPVKMGIYMTNPLWELRYKIISGDNENLFKAEEYVLGDFCFLRIRTKGG 103
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A T V V VLD ND P+FS Y
Sbjct: 104 NTAIL------NREVRDHYTLIVKAVEKNTNAEARTKVRVQVLDTNDLRPLFSPTSYSV- 156
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 157 ------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGTIVLT 207
Query: 176 G 176
G
Sbjct: 208 G 208
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 13/89 (14%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y IT GN F++ SK+G++ T+ +DRE+ ++ L +T TD
Sbjct: 1176 YKITSGNPQGFFSIN------------SKTGLITTTARKLDREQQDEHILEVTVTDNGSP 1223
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRF 117
K+ T V V +LDENDN P F QK Y+
Sbjct: 1224 PKSTVTRVIVKILDENDNKPQFLQKFYKI 1252
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 78/175 (44%), Gaps = 36/175 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N I+N + + +DREE Y L ITATD
Sbjct: 2954 VTYYITGGDPLGQFAIEN-----IQNEWK------VYVKKPLDREERDNYLLTITATD-- 3000
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS--IGSVSAT 145
G ++ V V VLD NDNSPV + +Y S+ F I VSAT
Sbjct: 3001 GTFSSKAIVEVKVLDANDNSPVCEKTLY------------SDTIPEDAFPGKLIMQVSAT 3048
Query: 146 DAD---GDKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHD 193
DAD ++ Y L P + + P TGEL + P D E Y L V+A D
Sbjct: 3049 DADIRSNAEITYTLFGPGAEKFKLNPDTGELKTSA--PLDREEQATYHLLVKAAD 3101
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y+I GN F + +P E++ + +DRE ++ Y+L + A+D
Sbjct: 3370 IHYAIIDGNQGSPFTI-DPARGEVK------------VTKLLDRETISGYTLTVQASDNG 3416
Query: 88 GINK-AETHVTVDVLDENDNSPVFSQKVYRFIV 119
+ A T V +DV D NDN+PVFS+ Y I+
Sbjct: 3417 SPPRVATTTVNIDVSDVNDNAPVFSRGNYSLII 3449
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 108/271 (39%), Gaps = 47/271 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
L TS +DREE A Y L++ A D G + + + + D NDN+P FS Y V
Sbjct: 3079 LKTSAPLDREEQATYHLLVKAADGGG-RFCQASIVLTLEDVNDNAPEFSADPYTITV--- 3134
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVIVPQTGELLLTGDPP 179
+ + + + V ATDAD K++Y L ++ + + ++ P
Sbjct: 3135 -------FENTEPGTLLTRVQATDADAGLNRKISYSLLNSADGQFSINELSGIIQLEKPL 3187
Query: 180 SDDVE--YELTVEAHDLQSPSRYAREPAQVW----LQFNSPVLQDEQLLQMIDRKSEAPH 233
+++ Y LT++A D P R V + N PV + + + +
Sbjct: 3188 DRELQAVYTLTLKAVDHGLPRRLTATSTIVISVLDINDNPPVFEYREYGATVSE--DILI 3245
Query: 234 RIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDV 293
E +V A R D E I +++ E KF I + I + EN D
Sbjct: 3246 GTEVLQVYAASR----------DIEANAEITYSIISGNEHGKFSIDSKTGAIFIIENLDY 3295
Query: 294 RVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
E + ++++T+ +AT+GG
Sbjct: 3296 -------------ESSHEYYLTV--EATDGG 3311
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 14/87 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GN++ F + + ++G+ + S +DRE +Y+L IT +D+
Sbjct: 754 YAISGGNEDSCFMM------------DMETGMFKILS-PLDRETTDRYTLNITVSDLGLP 800
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVY 115
+A H+ + VLD NDN P F Q+ Y
Sbjct: 801 QRAAWHLLEIRVLDANDNPPEFLQESY 827
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 23/123 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSIT+G+ F + T GV+ V + +D E Y L I ATD
Sbjct: 2214 VHYSITEGDPFSQFTVNFNT------------GVISVVA-PLDFESHPAYKLSIQATDSL 2260
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
AE V + V D NDN PVF+Q+ Y + + S + +S+ V ATDA
Sbjct: 2261 TGAHAEVFVDIIVEDINDNPPVFAQQSYAATLSE-ASVIG---------TSVVQVRATDA 2310
Query: 148 DGD 150
D +
Sbjct: 2311 DSE 2313
>gi|410915852|ref|XP_003971401.1| PREDICTED: protocadherin Fat 3-like [Takifugu rubripes]
Length = 4766
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 24/173 (13%)
Query: 28 VRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
++YSI G+ F + + +R T SG +L +RE Y+L I A+
Sbjct: 79 IKYSIQTGDSEGLFMAEGFVMGDFCFLRLRTNGASGAVL------NREVQDSYTLTIKAS 132
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+G+ T V + VLD ND P+FS Y F+V + + L +S+G V+A
Sbjct: 133 AQRGLEALAT-VYIRVLDTNDLRPLFSPTSYSFVVPE-SAPLG---------ASVGRVTA 181
Query: 145 TDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
TDAD + Y NL + P +G + LTG P D + +EL V+ D
Sbjct: 182 TDADMGSNGEFYYFFKNRVNLFAVHPTSGVITLTGRPRMDKQDRFELEVQVVD 234
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 63/129 (48%), Gaps = 23/129 (17%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
++LV + I+ GN F L P E + + SG +DRE+ Y L ITA+
Sbjct: 2974 NRLVSFYISGGNPRGVFGLA-PVQGEWK----------VYVSGLLDREQQDWYLLNITAS 3022
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
D G+ A T V V ++D NDNSP+ +Q VY +S ++ K I +V+A
Sbjct: 3023 D--GLYVAHTVVEVTIMDANDNSPICNQAVY-------SASFPEDMPINK---GILTVAA 3070
Query: 145 TDADGDKVA 153
TDAD A
Sbjct: 3071 TDADSGSSA 3079
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 81/182 (44%), Gaps = 34/182 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS++GT V L + K +RYSI GN TF + + +GV
Sbjct: 1047 ENSRAGTSV--LTVSAKDDDKGRDGALRYSIKGGNGLGTFTI------------DEDTGV 1092
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYRFIV 119
+ T+G +D E Y L + ATD +G+ A V + V D NDN+P+ S +Y +V
Sbjct: 1093 IY-TAGILDCESKDAYWLTVYATD-RGVTPLFASVEVFIQVEDVNDNAPLTSDPIYHPVV 1150
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAV--PSNLVVIVPQTGELL 173
+ + K S+ + A D D +++Y++ P N I P+TG +
Sbjct: 1151 ----------MENSPKDVSVIRIQAQDPDLTSTPSRLSYRITAGNPQNFFSINPRTGLIT 1200
Query: 174 LT 175
T
Sbjct: 1201 TT 1202
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 15/90 (16%)
Query: 26 QLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
Q +RYSI GN+ TF L P T +R S + + G+ L Y L ++ +D
Sbjct: 2430 QRLRYSIVSGNERMTF-LMEPHTGVLRLSNKRRQGMKL------------SYQLNVSVSD 2476
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVY 115
G+ V + VL N SPVFSQ+ Y
Sbjct: 2477 --GVFTNTAQVVIRVLGANLYSPVFSQRFY 2504
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 21/115 (18%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
MEN GT V + L S+ + Y I++GN++ +F + + T
Sbjct: 1674 MENGTVGTHVATVTALSRSA-------LFYDISRGNEDLSFYINHHTG------------ 1714
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
++ T +D E+ Y LV+ A + + +A T VTV V D NDNSPVF Q Y
Sbjct: 1715 -VINTRKRLDFEQTPSYFLVVRALSMTRM-EASTTVTVQVGDVNDNSPVFQQLRY 1767
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 13/90 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN + F++ NP ++G++ T+ +DRE+ A++ L +T D
Sbjct: 1177 LSYRITAGNPQNFFSI-NP-----------RTGLITTTTRKLDREQQAEHFLEVTVIDGP 1224
Query: 88 GINKAET-HVTVDVLDENDNSPVFSQKVYR 116
+ T V V V DENDN P F + YR
Sbjct: 1225 VTTRQSTVWVIVHVEDENDNPPTFPEVTYR 1254
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 89/201 (44%), Gaps = 34/201 (16%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G + L +L S + + Y I GN+ F + +++ G + V +
Sbjct: 3268 AVGTEVLRVLATSVDIGLNAEITYRIRSGNELGKFTI------------DTQLGAIFV-A 3314
Query: 67 GDIDREEVAQYSLVITATDVKGIN---KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLK 123
D+D E Y L + A D G N + T VT++++D NDN+P FSQ +Y +V +
Sbjct: 3315 DDLDFEVCKDYYLTLEAWD--GGNPPLSSATVVTIELMDVNDNAPTFSQDIYNVLVSE-D 3371
Query: 124 SSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP--SNLVVIVPQTGELLLTGDP 178
+S+ V+ VSA D D ++ Y + +N I P TG L +
Sbjct: 3372 ASVGQMVTR---------VSAEDLDSQVNGRITYSILKGDRNNHFWIDPVTGILKVNKRL 3422
Query: 179 PSDDVE-YELTVEAHDLQSPS 198
+ V Y L+V+A D SP+
Sbjct: 3423 DRELVSRYSLSVQAFDSGSPA 3443
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 73/178 (41%), Gaps = 23/178 (12%)
Query: 43 LKNPTTHEIRNSTE-----SKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK-AETHV 96
L P + + N+ E GV+L T DREE Y LV+ + + I K A V
Sbjct: 2014 LNEPLRYTLLNAGERFVIRPTCGVVLTTGVPFDREERDSYELVVEVSREEEILKVARVTV 2073
Query: 97 TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVA 153
V V D NDN+P F Y V + S+I VSA D D +V+
Sbjct: 2074 QVQVEDVNDNAPEFVNLPYYAAVQ----------VDAEPESAIFKVSAVDRDAGVNGEVS 2123
Query: 154 YKLAVPSNLVVIVPQTGELLLTGDPPSD--DVEYELTVEAHDLQSP--SRYAREPAQV 207
Y L + P TGEL L +D + EY+L + A D P SR P V
Sbjct: 2124 YSLKQQHRNFQVNPVTGELTLKKAFEADLSNAEYKLVLVATDGGFPPLSREVELPVTV 2181
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
L+ + +D E + Y++ + TD G N A T V + V D NDN PVFSQ Y
Sbjct: 1408 LIVAKPLDAEVQSVYNMTVQVTD--GTNFATTQVFIRVQDSNDNPPVFSQPAY 1458
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 46 PTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDE 103
P T + +SK+G + T +D EE + YS + A+D+ + + T VT+ V D
Sbjct: 2876 PITTSSVFAIDSKTG-WITTVSQMDHEECSSYSFEVVASDLGEVRSLSSTTAVTIAVSDV 2934
Query: 104 NDNSPVFSQKVYR 116
NDN P F +++YR
Sbjct: 2935 NDNPPRFERELYR 2947
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 104/255 (40%), Gaps = 46/255 (18%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKA---ETHVTVDVLDENDNSPVFSQKVYRFI 118
+++ +DRE Y L + ATD G A + ++T+ VLD NDN+PVF ++ Y
Sbjct: 3203 MVILEKSLDRESQDSYRLRVQATDQAGQRGALSSQVNLTILVLDVNDNAPVFQRRDYGVT 3262
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNL--VVIVPQTGELLLTG 176
V + +V+ + + + S ++ Y++ + L I Q G + +
Sbjct: 3263 VPE-------DVAVGTEVLRVLATSVDIGLNAEITYRIRSGNELGKFTIDTQLGAIFV-- 3313
Query: 177 DPPSDDVEYE------LTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQLLQMIDR 227
+DD+++E LT+EA D +P + + L N+P + ++
Sbjct: 3314 ---ADDLDFEVCKDYYLTLEAWDGGNPPLSSATVVTIELMDVNDNAPTFSQDIYNVLVSE 3370
Query: 228 KSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
+ + R+ + D ++ GRI +++ K F WI
Sbjct: 3371 DASVGQMV------------TRVSAEDLDSQVNGRITYSILKGDRNNHF-------WID- 3410
Query: 288 DENGDVRVKKRWDFE 302
G ++V KR D E
Sbjct: 3411 PVTGILKVNKRLDRE 3425
>gi|390459331|ref|XP_003732278.1| PREDICTED: protocadherin beta-18-like [Callithrix jacchus]
Length = 788
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE +Y++ IT TD+ K E ++T+ + D NDN+P F+Q Y V +
Sbjct: 404 LVTEGPLDREIRNEYNITITVTDLGTPRLKTEYNITLLISDVNDNAPAFTQTSYTLFVRE 463
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGS+SATD D +V Y L P ++LV I G
Sbjct: 464 ----NNSPALH------IGSISATDRDSGTNAQVTYSLLPPQDTHLPLASLVSINADNGH 513
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L G + ++ +E V A D SP+
Sbjct: 514 LFALGSLDYEALQAFEFRVGATDRGSPA 541
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 62/118 (52%), Gaps = 17/118 (14%)
Query: 35 GNDNHTFALKNPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK 91
G N+T + P +H ++R+S E + LV + +DRE+ A++SL +TA D +
Sbjct: 166 GVQNYTIS---PNSHFHLKLRDSDEGRKYPELVLNQSLDREKEAEFSLTLTAVDGGSPPR 222
Query: 92 AETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ T V V VLD NDN+P F + VY V + S L+ S I VSATD D
Sbjct: 223 SGTTVIHVVVLDINDNAPEFEKPVYEVHVPE-SSPLD---------SLIVKVSATDLD 270
>gi|386118331|gb|AFI99113.1| dachsous protocadherin [Clytia hemisphaerica]
Length = 3438
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 23/161 (14%)
Query: 41 FALKNPTTHEIRNSTE---SKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVT 97
+AL NP+ ++ + E K + L+ S +D E+ Y+ + A K + +T V
Sbjct: 1885 YALVNPS-RDVADHFEVDVEKGAIYLIKS--LDYEQQRSYTFKVKAEGKKVDSFDQTTVQ 1941
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAY 154
+ V DENDN PVF+Q VY F + ++K + IG+V ATD D D +V Y
Sbjct: 1942 IQVQDENDNKPVFTQSVYNFSLPEIKVG-----------AVIGTVRATDRDQDGQQQVRY 1990
Query: 155 KLAVPSNLVVIVPQTGEL-LLTGDPPSDDVEYELTVEAHDL 194
+ P I P+TGE+ L+ G+ +Y L V A D+
Sbjct: 1991 RFDPPDWNFQINPETGEVHLMDGEITRG--QYRLHVVAMDV 2029
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 79/153 (51%), Gaps = 11/153 (7%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKV 114
+SKSG ++ TS +DRE +Y+L + +V + +T V + + D ND+ P+F+
Sbjct: 1683 DSKSG-MIRTSIPLDRENRDKYTLDVLVRNVAPPHAEDTCKVIITIDDVNDSPPIFTGGA 1741
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLA---VPSNLVVIVPQTGE 171
++ I L +++ + + + A D +V +++ PS ++ + +TGE
Sbjct: 1742 HQEI-----HILENSLPVPRSIHRLRHIDADDVKNSRVTFQIVNFVKPSKVIRLDSKTGE 1796
Query: 172 LLLTGDPPSDD-VEYELTVEAHDLQSPSRYARE 203
L L ++ EY LTVEA +++SP A++
Sbjct: 1797 LWLNEKLDREERSEYVLTVEAKNIESPYHKAQQ 1829
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 20/148 (13%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+E GT + L + + +++V + +G D F L+ T E+ N +K
Sbjct: 354 IEGMPIGTTIGSLTAVDKDLTQANNEIVSIGLAKGED--FFKLEQ-TKDEVLNGVATKK- 409
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYR--- 116
+ T +IDRE ++ I+ATD T TV+V+D+NDN+P+F +++Y
Sbjct: 410 YFIKTMKEIDREVTPSINISISATDSGSPPLTSTVDYTVNVIDKNDNNPIFEKQIYETEL 469
Query: 117 --------FIV----GDLKSSLNSNVSH 132
F++ DL + +NS +S+
Sbjct: 470 NETAKLGSFVLQVKASDLDAGINSRISY 497
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 11/96 (11%)
Query: 65 TSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLK 123
T ++DRE L I D++G +A T + V VLD NDN P F+ + RF V +K
Sbjct: 2643 TREELDRETTDTIQLTIRVADIEGAGMEAFTSLNVTVLDVNDNEPSFNYDLIRFNVIKIK 2702
Query: 124 SSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL 156
++ + S + ATD D +V+Y++
Sbjct: 2703 ENMPPH-------SVVFRAGATDKDIGENGRVSYRI 2731
>gi|355559659|gb|EHH16387.1| hypothetical protein EGK_11661, partial [Macaca mulatta]
Length = 3211
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 80/280 (28%), Positives = 117/280 (41%), Gaps = 53/280 (18%)
Query: 42 ALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDV 100
AL N + E+ S + +SG L+ T+ +DRE + ++ L +TA D A T V V V
Sbjct: 357 ALMNSRSLELF-SIDPQSG-LIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTV 414
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLA 157
D ND+SPVF Q YR +L NV ++ I + ATD D A Y+
Sbjct: 415 ADRNDHSPVFEQAQYR-------ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFV 464
Query: 158 VPSNLVV-------IVPQTGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVW 208
P I P++G + +G + +E YEL VEA D Q P P
Sbjct: 465 GPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSAT 519
Query: 209 LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGR 262
++ + VL D AP EKR V + VRP R+ ++ D + G
Sbjct: 520 VRVHITVL---------DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGL 570
Query: 263 IVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ + + R F I G+++V DFE
Sbjct: 571 VHYNIISGNSRGHFAID--------SLTGEIQVVAPLDFE 602
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 480 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 538
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 539 KRY---VAQVREDV-------RPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDS 588
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 589 LTGEIQVVA--PLDFEAEREYALRIRAQDAGRP 619
Score = 42.0 bits (97), Expect = 0.41, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 30/179 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 1069 ENSIVGSVVA--QITAVDPDEGPNAHIMYQIVEGNIPELFQM------------DIFSGE 1114
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIV 119
L D+D E +Y +V+ AT +++A HV + +D+NDNSPV + Q ++ V
Sbjct: 1115 LTALI-DLDYEARQEYVIVVQATSAPLVSRATVHVRL--IDQNDNSPVLNNFQILFNNYV 1171
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
+ + S + IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1172 SNRSDTFPSGI--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1222
Score = 41.2 bits (95), Expect = 0.72, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y
Sbjct: 702 SGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHL------- 754
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
LN + + +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 755 RLNEDAA---VGTSVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLD 811
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 812 YKQERYFKLVLTASD 826
Score = 39.3 bits (90), Expect = 2.8, Method: Composition-based stats.
Identities = 58/218 (26%), Positives = 87/218 (39%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 972 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1019
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V+ Y L A D +G+ T V++ V D NDN+PVF + + V + NS V
Sbjct: 1020 AVSVYELTAYAVD-RGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1073
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1074 G-----SVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1128
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR + NSPVL + Q+L
Sbjct: 1129 YVIVVQATSAPLVSRATVHVRLIDQNDNSPVLNNFQIL 1166
Score = 38.1 bits (87), Expect = 5.8, Method: Composition-based stats.
Identities = 49/164 (29%), Positives = 68/164 (41%), Gaps = 21/164 (12%)
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+D E+ Y+L ITA D KA+T +V V V D NDN+P F Y +V +
Sbjct: 910 LDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSE------ 963
Query: 128 SNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN---LVVIVPQTGELLLTGDPPSD 181
F+S+ +SATD D +V Y + I P +G + +
Sbjct: 964 ----DAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDRE 1019
Query: 182 DVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQL 221
V YELT A D P QV +Q N+PV E+
Sbjct: 1020 AVSVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEF 1063
Score = 37.7 bits (86), Expect = 6.5, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ GT V + V + + + + Y IT GN + FA+ ++ GV
Sbjct: 758 EDAAVGTSV----VSVTAVDRDANSAISYQITGGNTRNRFAI------------STQGGV 801
Query: 62 LLVTSG-DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +D ++ + LV+TA+D + ++ +V +++ D N + PVF Y V
Sbjct: 802 GLVTLALPLDYKQERYFKLVLTASD-RALHD-HCYVHINITDANTHRPVFQSAHYSVSVN 859
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPP 179
+ + S+I +SA+D D G+ + NL +T P
Sbjct: 860 EDRPV----------GSTIVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAP 909
Query: 180 ---SDDVEYELTVEAHDLQSPSR 199
D V Y L + A D P +
Sbjct: 910 LDYEDQVTYTLAITARDNGIPQK 932
Score = 37.7 bits (86), Expect = 7.5, Method: Composition-based stats.
Identities = 51/190 (26%), Positives = 83/190 (43%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 556 LRVTATDRDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVVA-PLDFE 602
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y+L I A D ++ ++ V+D ND+ P+F ++ V + + L +V
Sbjct: 603 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHIPIFVSTPFQVSVLE-NAPLGHSV 661
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL-AVPSNL-VVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L V S+ VI TG + ++G + VE Y
Sbjct: 662 IH------IQAVDADHGENARLEYSLTGVASDTPFVINSATGWVSVSGPLDRESVEHYFF 715
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 716 GVEARDHGSP 725
>gi|5911899|emb|CAB55933.1| hypothetical protein [Homo sapiens]
Length = 701
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 54/103 (52%), Gaps = 14/103 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 308 LVTQRTLDRESQAEYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRE 367
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN 161
NS H IGSVSATD D +V Y L P N
Sbjct: 368 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQN 400
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 46/98 (46%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + SL +TA D ++ T + + VLD NDN+P F Q Y V +
Sbjct: 100 LVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSFYEVQVPE 159
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
S LNS V VSA D D VAY L
Sbjct: 160 -NSPLNSLVV---------VVSARDLDAGAYGSVAYAL 187
>gi|410948473|ref|XP_003980963.1| PREDICTED: protocadherin beta-5 [Felis catus]
Length = 724
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 72/151 (47%), Gaps = 28/151 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT TD+ K + ++TV V D NDN+P FSQ Y V +
Sbjct: 402 LVTEKPLDRESQAEYNITITVTDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H IGSVSATD D +V Y L P++ LV I G+
Sbjct: 462 ----NNSPALH------IGSVSATDRDSGANAQVTYSLLPPADPQLPLASLVSINADNGQ 511
Query: 172 LLLTGDPPSDDVE----YELTVEAHDLQSPS 198
L S D E +E V A D SP+
Sbjct: 512 LFALR---SLDYEALRAFEFGVRAADRGSPA 539
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVY 115
L+ +DREE ++ SL +TA D ++ T V ++V+D NDN+P F Q +Y
Sbjct: 194 LMLDKSLDREEQSELSLTLTALDGGDPPRSGTTAVRIEVVDINDNAPAFLQSLY 247
>gi|168278929|dbj|BAG11344.1| protocadherin beta 16 precursor [synthetic construct]
Length = 776
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ +T TD+ K E ++TV + D NDN+P F+Q Y V +
Sbjct: 403 LVTERALDREARAEYNITLTVTDMGTPRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGINAQVTYSLLPPQDPHLPLASLVSINADNGH 512
Query: 172 LLLTGDPPSDDV-EYELTVEAHDLQSPS 198
L + + E+E V A D SP+
Sbjct: 513 LFALRSLDYEALREFEFRVSATDRGSPA 540
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 22/154 (14%)
Query: 49 HEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNS 107
HE R+ + LV ++DREE Q L +TA D ++ T V ++V+D NDN+
Sbjct: 183 HEFRDGRKYPE---LVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNA 239
Query: 108 PVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP----S 160
P F Q +Y+ + + NS + S + +VSA D DG K++Y L P S
Sbjct: 240 PEFEQPIYKVQIPE-----NSPLG-----SLVATVSARDLDGGANGKISYTLFQPSEDIS 289
Query: 161 NLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHD 193
+ + P TGE+ L + V YE+ ++A D
Sbjct: 290 KTLEVNPMTGEVRLRKQVDFEMVTSYEVRIKATD 323
>gi|296485147|tpg|DAA27262.1| TPA: FAT tumor suppressor homolog 2 [Bos taurus]
Length = 3159
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 25/204 (12%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G PIL+ S+ V Y + +GN N F++ S SG L+ T +D
Sbjct: 484 GSPILLISATSFSE--VTYELREGNKNGVFSMN------------SYSG-LISTQKKLDH 528
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E+++ Y L I +++ G + V V ++DENDN+PVFS+ + VG + + N
Sbjct: 529 EKISSYQLKIRGSNMAG-TFTDVMVLVYIIDENDNAPVFSKSTF---VGQISEAAPLNSM 584
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EY 185
+ ++ + A+D+D + + YK+ P L + I P G L + + + +
Sbjct: 585 IMDENNNPLVIRASDSDKEANSLLVYKILEPETLKFLKIDPSMGTLTTVLEMDYESMPSF 644
Query: 186 ELTVEAHDLQSPSRYAREPAQVWL 209
+ HD SP +A AQV +
Sbjct: 645 RFDIYVHDQGSPILFAPRAAQVII 668
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 90/199 (45%), Gaps = 31/199 (15%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS+ G V L L A + Q+ Y IT+G+ F + E R
Sbjct: 1726 VENSEPGEPVATLKTLDADIAEQNRQVTCY-ITEGDPLGQFGISQ-VGDEWR-------- 1775
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+ + +DRE A+Y L ITA+D G +A V + VLD NDNSP SQ +Y
Sbjct: 1776 --IFSRKTLDREHTAKYLLRITASD--GKFQASVPVEIFVLDINDNSPQCSQLLYTG--- 1828
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-SNLVVIVPQTGEL--LL 174
K S + H+ I VSATD D D ++ Y L P ++ + P TG+L L
Sbjct: 1829 --KVSEDVPPEHF-----ILKVSATDLDSDTNAQITYSLHGPGADEFKLDPHTGDLTTLT 1881
Query: 175 TGDPPSDDVEYELTVEAHD 193
D DV Y L +A D
Sbjct: 1882 ALDREKKDV-YSLVAKATD 1899
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
+T+ K+GVL VT G +D E ++ + ATD + +E V V V D NDN P FSQ
Sbjct: 1025 TTDFKTGVLTVT-GPLDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQL 1083
Query: 114 VY 115
VY
Sbjct: 1084 VY 1085
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 18/89 (20%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQK------- 113
LL T+ +DRE ++ L +T D + ++ + V V + D NDN PVFS K
Sbjct: 1 LLATARQLDRENKDEHILEVTVLDNGEPSLRSTSRVVVRIADVNDNPPVFSHKLFNVRLP 60
Query: 114 ----------VYRFIVGDLKSSLNSNVSH 132
VYR + DL LN V++
Sbjct: 61 ERLNPGTSGPVYRLVASDLDEGLNGRVTY 89
>gi|194219833|ref|XP_001502269.2| PREDICTED: protocadherin beta-6 [Equus caballus]
Length = 794
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 31/196 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+T G +DRE A+Y++ IT TD+ K + ++TV V D NDN+P F+Q Y V +
Sbjct: 401 LITEGALDRESRAEYNITITVTDMGTPRLKTQHNITVLVSDVNDNAPAFTQTSYTLWVRE 460
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D ++ Y L P ++LV I G
Sbjct: 461 ----NNSPALH------IGSVSATDTDAGANAQLTYSLLPPQDPHLPLASLVSINADNGH 510
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ-----L 221
L + ++ +E V A D SP+ ++ +V + NSP VL Q
Sbjct: 511 LFALRSLDYEALQAFEFGVGATDRGSPALSSQARVRVLVLDANDNSPFVLYPLQNGSAPC 570
Query: 222 LQMIDRKSEAPHRIEK 237
+++ R +EA + + K
Sbjct: 571 TELVPRAAEAGYLVTK 586
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 45 NPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLD 102
NP H + RN ++ + LV +DREE + L +TA D ++ T + + VLD
Sbjct: 174 NPHFHVLTRNRSDGRKFPELVLDKALDREEQPELRLTLTALDGGSPPRSGTTKIQILVLD 233
Query: 103 ENDNSPVFSQKVY 115
NDN+P F+Q++Y
Sbjct: 234 INDNTPEFAQELY 246
>gi|61316298|ref|NP_001013029.1| protocadherin beta-15 precursor [Pan troglodytes]
gi|62510885|sp|Q5DRD3.1|PCDBF_PANTR RecName: Full=Protocadherin beta-15; Short=PCDH-beta-15; Flags:
Precursor
Length = 787
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ K + ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTEGALDRETRAEYNITITITDLGTPRLKTQHNITVLVSDVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINTDNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 LFALRSLDYEALQAFEFHVGATDRGSPA 540
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVY 115
LV ++DREE A+ L +TA D ++ T + + VLD NDN+P F+Q +Y
Sbjct: 194 LVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFAQALY 247
>gi|291238398|ref|XP_002739116.1| PREDICTED: predicted protein-like, partial [Saccoglossus kowalevskii]
Length = 2257
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 72/162 (44%), Gaps = 26/162 (16%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+EN+ G V + + H H VR+SIT GN F + + G
Sbjct: 1132 IENAPLGKSVYQVGATDDDAAGHVHGQVRFSITSGNSAGHFVI------------DEMDG 1179
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGI----NKAETHVTVDVLDENDNSPVFSQKVY- 115
V+ T ++DRE + Y LV+TATD AE +VT+ V D NDN+PVF VY
Sbjct: 1180 VI-STVAELDRETRSSYDLVVTATDSSAALNDERSAEENVTITVTDVNDNTPVFVPAVYS 1238
Query: 116 -----RFIVGDLKSSLNSN--VSHWKKFSSIGSVSATDADGD 150
VG+ +L +N K + +S DADGD
Sbjct: 1239 VSISESLAVGETVLTLTTNDLDQGVNKLRDVAKLSG-DADGD 1279
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 89/180 (49%), Gaps = 30/180 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y++T GND F + + +G++ V +DRE V Y++++T TD
Sbjct: 1586 LTYALTSGNDLGHFTI------------DQDTGIITVEQL-LDRETVDAYNMIVTVTDDG 1632
Query: 88 GINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
++ T VT+++ D NDN+P F+ Y F+V + N ++S +S+G ++ATD
Sbjct: 1633 TPTRSNTADVTLNLNDVNDNAPTFTMATYAFVVQE-----NVDIS-----TSVGQLAATD 1682
Query: 147 AD---GDKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPSRY 200
D +AY + S+ I TGE+ + + + +Y L +A DL S S++
Sbjct: 1683 PDLGANGFIAYSIESGANSDHFAINSNTGEIHTSAVIDRESISQYSLVCKARDLGSVSQF 1742
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 14/96 (14%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ + YSI G ++ FA+ N T EI TS IDRE ++QYSLV A
Sbjct: 1688 NGFIAYSIESGANSDHFAI-NSNTGEIH------------TSAVIDRESISQYSLVCKAR 1734
Query: 85 DVKGINK-AETHVTVDVLDENDNSPVFSQKVYRFIV 119
D+ +++ V + V DENDN PV+ +Y +
Sbjct: 1735 DLGSVSQFTLVDVVITVEDENDNDPVYESTLYEIFM 1770
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 55/118 (46%), Gaps = 15/118 (12%)
Query: 1 MENSKSGTGVKGLPILVA-SSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKS 59
+ENS SGT V + +VA S + ++ YSI + N P+T EI
Sbjct: 363 LENSPSGTTVADVGDIVAEDSDEGSDGIISYSIDAVDPNVNKFYIEPSTGEI-------- 414
Query: 60 GVLLVTSGDIDREEVAQ-YSL-VITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
VT G D E Q Y++ V+ A D N + +D+ D NDN P+FSQ +Y
Sbjct: 415 ----VTIGTFDYETDPQRYTITVMAADDGNPSNTVTDDIILDIEDYNDNEPIFSQNIY 468
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 19/111 (17%)
Query: 11 KGLPILVAS---SHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSG 67
+ + I+VA+ S+ + + ++ YSIT GN + F + + SG ++T+G
Sbjct: 1029 QAVKIVVATDRDSNLNNNNVIEYSITDGNGDGFFTIG------------ASSG-EIITTG 1075
Query: 68 DIDREEVAQYSLVITATDVKG---INKAETHVTVDVLDENDNSPVFSQKVY 115
ID E + L +TA D G N + VT+ +L N+ +PVF Y
Sbjct: 1076 LIDYESYESFVLEVTAKDKNGGANANSDTSRVTISILPVNEYTPVFQSLPY 1126
>gi|395748016|ref|XP_002826620.2| PREDICTED: cadherin-3 isoform 1 [Pongo abelii]
Length = 829
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+VA+Y+L + ATD+
Sbjct: 252 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVISSGLDREKVAEYTLTLQATDM 303
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+PVF + Y
Sbjct: 304 DGDGSTTTAVAVVEILDANDNAPVFDPQKY 333
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DREE+A+Y L A G + + ++++ V D+ND+ P F+Q
Sbjct: 159 AVEKETGWLLLNK-PLDREEIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQ 217
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAV 158
+R V L+ L +S+ V+ATD D Y V
Sbjct: 218 DTFRGSV--LEGVLPG--------TSVMQVTATDEDDAIYTYNGVV 253
>gi|410913723|ref|XP_003970338.1| PREDICTED: protocadherin Fat 1-like [Takifugu rubripes]
Length = 1748
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 82/159 (51%), Gaps = 22/159 (13%)
Query: 50 EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSP 108
E+R+ E +LV +DRE A +SLV+TA D K + ++ V VLD NDN+P
Sbjct: 1122 EVRDKGEDGKIPILVLQKSLDRETAASHSLVLTALDGGKPPKSGQMNILVKVLDVNDNTP 1181
Query: 109 VFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL--AVPSN-- 161
VFS+ VY + + N+ + S++ V+ATD D +V+Y +V +N
Sbjct: 1182 VFSKDVYSVTLPE-----NAPLG-----SAVVQVNATDLDEGQNGEVSYSFGNSVSNNIF 1231
Query: 162 -LVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSP 197
L I P TGE+ + G D D +YE+ +EA D P
Sbjct: 1232 QLFGINPSTGEITVKGLIDYEQKD-KYEIEIEASDKGLP 1269
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 20/145 (13%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+LV +DRE +SLV+TA D K E ++ ++VLD NDN+PVFS+ VY ++
Sbjct: 185 ILVVQKSLDRETAGSHSLVLTALDGGKPPKSGEMNILINVLDNNDNAPVFSKDVYSVMLH 244
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSN-----LVVIVPQTGEL 172
+ NS + +++ V+ATDAD +V Y + N L I TGE+
Sbjct: 245 E-----NSPIG-----TTVIQVNATDADDGPNGEVVYSFSNSMNQNVLDLFDINEITGEI 294
Query: 173 LLTGDPPSDDVE-YELTVEAHDLQS 196
+ G ++ E YE+ VEA D S
Sbjct: 295 TVKGPIDYEENERYEIEVEASDKAS 319
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE+ +Y L ITA D + +E +TV V D NDN P FS Y F + +
Sbjct: 1349 LVTKSALDREQTDKYDLTITAKDAGQPSLSSEKTITVVVSDVNDNRPEFSLSPYTFYISE 1408
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE+ +Y L ITA D + +E +TV V D NDN P FS Y F + +
Sbjct: 400 LVTKSALDREQRDKYDLTITAKDAGQPSLSSEKTITVVVSDVNDNRPEFSLSPYTFYISE 459
>gi|345479135|ref|XP_001602595.2| PREDICTED: cadherin-related tumor suppressor-like [Nasonia
vitripennis]
Length = 4967
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 118/283 (41%), Gaps = 62/283 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YS T GN ++ FA+ + SG + V +G +DRE +Y L +T D
Sbjct: 2821 VSYSFT-GNPSNKFAI------------DPLSGNVTV-AGHLDREVQDEYLLKVTVGD-- 2864
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G AET +T+ + D+NDN P F ++ Y F +L+ + + +G V ATD
Sbjct: 2865 GAWGAETPLTITIQDQNDNPPEFEEETYHFHFPELQG----------RMAHVGQVVATDR 2914
Query: 148 D----GDKVAYKLAVPSNLVVIVPQTGELLL--------TGDPPSDDVEYELTVEAHDLQ 195
D ++Y L PS+L + P +G++ T P S + Y L V A D
Sbjct: 2915 DKQGPNSVISYSLLQPSDLFTVDPASGDIFSKRTLRYKHTKRPTSPENVYSLYVVATDNG 2974
Query: 196 SPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAV---RPTKR--I 250
P ++ V ++D + AP R E+R V PT +
Sbjct: 2975 RPPLSSKTLVYV---------------SIVDSNNHAP-RFEQRAYLYPVPEGYPTNKKIA 3018
Query: 251 DFSETDGE---MEGRIVFALEKETEREKFKIRDENPWITVDEN 290
+D E + I + + E F + E+ W+ V+++
Sbjct: 3019 QVHASDDEDFGVNAEIEYTVAAGNGSEYFFVEPESGWLYVNKS 3061
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 22/118 (18%)
Query: 42 ALKNPTTHEIRNSTE---------SKSGVLLVTSGDIDREEVAQYSLVITATDVKGI--N 90
L TT EIR E +++ ++ +G +DREE+ Y+L I ATD KG
Sbjct: 362 GLNGETTVEIRAGNELGHFQLGHNTQNFHIVRVNGKLDREEIPMYNLTIVATD-KGSPPR 420
Query: 91 KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
A ++ + V D ND+ PVF Q Y ++ +L S + S V+ S+SATDAD
Sbjct: 421 SATAYLVIHVNDVNDHEPVFQQSEYSAVLSEL-SPIGSFVA---------SISATDAD 468
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 81/183 (44%), Gaps = 36/183 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
VRYSI G+DN F + +GV+ V +++ E A+Y L + A D
Sbjct: 2188 VRYSIAAGDDNRDFTISE------------DAGVIRVAK-NLNFERKARYRLQVQAEDCA 2234
Query: 88 G-------INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG 140
++ AE V +++LD NDN+PVF Y L + + + F +
Sbjct: 2235 PELGGEALVDAAE--VVINLLDINDNAPVFLDSPY------LAHVMENMLPPGGGF--VM 2284
Query: 141 SVSATDAD----GDKVAYKLA-VPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDL 194
V A DAD D+V Y L ++L I TG++ L + V EY LT+ A D
Sbjct: 2285 QVKAYDADTPPYNDQVRYFLKEGDTDLFRINASTGDIFLLRPLDRELVSEYVLTLVAMDT 2344
Query: 195 QSP 197
SP
Sbjct: 2345 GSP 2347
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 97/239 (40%), Gaps = 31/239 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
+S +G L + +DRE Y L + A D G+ + +++ V D NDN+P F Y
Sbjct: 1785 DSSTGQLRLAEA-LDREAKESYVLRVRADD--GLQHTDVTLSILVTDTNDNAPSFQATAY 1841
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG----DKVAYKLAV--PSNLVVIVPQT 169
F V + + + S +G V A DAD +++Y L +++ + P T
Sbjct: 1842 SFDV----------LENVPRGSRVGQVVANDADAPGPNSQISYALISDWANDVFSLNPST 1891
Query: 170 GELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQ-LLQMIDR 227
G LT + V+ Y L V+A D P+ + V + N L D + + R
Sbjct: 1892 GVFTLTASLDYEQVQHYILVVQATDGGLPAL----SSTVTVYCNVVDLNDNTPIFEAGPR 1947
Query: 228 KSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWIT 286
+E +E + V D D G +V+++ E E F I + T
Sbjct: 1948 SAEL---MENATIGSVVLSASASDLDSGD---NGHVVYSIISGDEAEDFGIANNGTLYT 2000
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 69/173 (39%), Gaps = 15/173 (8%)
Query: 4 SKSGTGVKGLPILVASSHKHPHQLVR--YSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
S+S T L + A+ P V Y I GN + F L N S +
Sbjct: 108 SESATAGTKLLLDAATDKDTPENGVTDDYFIVNGNTDAKFRLS-----VTGNPIGETSYL 162
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVG 120
L T+G +DRE+V Y L + A D K V V VLD NDN P+F Q
Sbjct: 163 HLETTGKLDREQVEYYHLNVCARDKGRPPKLGCLMVNVTVLDVNDNPPIFQQS------- 215
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELL 173
D +LN + + ++ +V D ++ Y L I P TG ++
Sbjct: 216 DYVVTLNESAAVGTHVLTVRAVDKDTDDNAQLTYYLPDNERQFTIDPDTGAIV 268
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 55/104 (52%), Gaps = 17/104 (16%)
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVD--VLDENDNSPVFSQKVYRF 117
GVL V +G +DRE+ A Y+L + A D +G T TV VLDENDNSP+F + Y
Sbjct: 2103 GVLRV-AGPLDREQRANYTLRLIAKD-RGEPARSTLQTVQLLVLDENDNSPIFDPRQYSA 2160
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV 158
V + N+++ +S+ VSA D D +V Y +A
Sbjct: 2161 SVAE-----NASIG-----ASVLQVSALDRDEGANGRVRYSIAA 2194
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 44/91 (48%), Gaps = 15/91 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YS+T GN + F + ++N +DREE Y+L +TA+D
Sbjct: 1004 IFYSVTDGNLENRFGIFPDGQLYVKNV--------------LDREEQDYYALEVTASDQG 1049
Query: 88 GINKAET-HVTVDVLDENDNSPVFSQKVYRF 117
++ T V V ++DENDN+P FS + F
Sbjct: 1050 NPKRSSTVPVVVHIIDENDNAPQFSNSSFTF 1080
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 88/224 (39%), Gaps = 53/224 (23%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+VT +DRE+ A Y L + A D A ++T+ V D NDN+P F+ Y V
Sbjct: 2425 IVTLERLDREQTAVYHLTLVAQDSSPTEPKAAAVNLTITVTDLNDNAPRFASPRYTAYVP 2484
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD--KVAYKL-AVPSNLVVIVPQTG-----EL 172
D S K G+ + D DGD ++ Y+L S+ + P +G E
Sbjct: 2485 D---------STGKGDFVFGAKATDDDDGDNSRIVYRLHGKDSHRFAVDPHSGVIRALEK 2535
Query: 173 LLTGDPPSDDVEYELTVEAHD--LQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSE 230
L +G Y+L +EA D ++ S A +W
Sbjct: 2536 LASG----GRSMYQLQIEAFDSGVEPRSVSADLVVHLW---------------------- 2569
Query: 231 APHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETERE 274
+R++ + RPT F+ + EGRI+ L T +E
Sbjct: 2570 ------ERQLFPSFRPTTATRFTLAEDVPEGRIITTLSATTPKE 2607
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 14/108 (12%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + S P+ +VRY I+ GN+ H F++ H I +G + + +D +
Sbjct: 3125 LTVNAVDSDDGPNGMVRYEISAGNERHEFSI-----HPI-------TGAVTILDA-LDYD 3171
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
V +Y L ITA D+ G T+ VL ++ +SP ++ YR + G
Sbjct: 3172 TVQEYRLNITARDL-GFESKHAIATLTVLAKDIDSPKYAVIQYRILGG 3218
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 125/331 (37%), Gaps = 58/331 (17%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
MEN+ G+ V S + H V YSI G++ F + N T
Sbjct: 1952 MENATIGSVVLSASASDLDSGDNGH--VVYSIISGDEAEDFGIANNGT------------ 1997
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGIN----KAETHVTVDVLDENDNSPVFSQKVYR 116
L T +DRE + Y+LV+ A D + VT+ +LD ND SP F
Sbjct: 1998 --LYTRRLLDRENKSVYNLVLEAADSPRPPTTPLASTIQVTISLLDVNDQSPEF------ 2049
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKL-----AVPSNLVVIVPQTGE 171
V ++S+ N + ++ +V + V Y L ++P +L + G
Sbjct: 2050 --VSSNQTSILENAAINSVVMAVKAVDKDEGRNGYVEYALEFGHGSLPFSLGAV---DGV 2104
Query: 172 LLLTGDPPSD---DVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRK 228
L + G P D Y L + A D P+R + Q+ VL + + D +
Sbjct: 2105 LRVAG--PLDREQRANYTLRLIAKDRGEPARSTLQTVQLL------VLDENDNSPIFDPR 2156
Query: 229 SEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVD 288
+ E + +V +D E GR+ +++ + F I ++ I V
Sbjct: 2157 QYSASVAENASIGASVLQVSALDRDEG---ANGRVRYSIAAGDDNRDFTISEDAGVIRVA 2213
Query: 289 ENGDVRVKKRWDFE--------ELGPEKTID 311
+N + K R+ + ELG E +D
Sbjct: 2214 KNLNFERKARYRLQVQAEDCAPELGGEALVD 2244
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 61/137 (44%), Gaps = 16/137 (11%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL-DENDNSPVFSQKVYRFIVGD 121
L+T +DRE V +Y +++ A D ++ T + L D NDN PVF Y F V
Sbjct: 605 LMTKITLDRESVEEYRVLVIARDQGTPPQSSTATVLLTLEDVNDNPPVFYPTNYFFTV-- 662
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-LVVIVPQTGELLLTGD 177
+ IG V ATDAD +V Y L + + +TG++ L G
Sbjct: 663 --------PQDATPGTLIGKVFATDADAKENAQVRYSLESGGDGFFSVDERTGDVFLQGA 714
Query: 178 -PPSDDVEYELTVEAHD 193
+ + +ELTV A D
Sbjct: 715 LRQAHKILFELTVSAKD 731
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 64/152 (42%), Gaps = 26/152 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y GN+ + FA+ T L+ T +DRE L + A D
Sbjct: 475 IYYDFESGNEQNWFAIDQDTG-------------LVTTVATLDREIQGSVELKVLARD-G 520
Query: 88 GINK--AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G N TH+ V +LDEND +P FSQ + ++ +L+ N +++ +V
Sbjct: 521 GPNPKYVSTHLRVTILDENDEAPKFSQNI-------VEVTLSENTPANSLVATLSAVDND 573
Query: 146 DADGDKVAYKLAVPSNLVVIVPQTGEL-LLTG 176
VAY L N++ P+T L LTG
Sbjct: 574 QGTNGSVAYSLH--PNVLRDYPKTFALDALTG 603
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 18/120 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+ T+ +DREE++ Y L++ A D +G + V V VLD+NDN P F++ +
Sbjct: 2739 ISTNAKLDREEISSYELIVEARD-RGTPQLTGTATVLVTVLDKNDNPPRFTR------LF 2791
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL-AVPSNLVVIVPQTGELLLTG 176
+ + NS + + + ++++D D V+Y PSN I P +G + + G
Sbjct: 2792 SVNVTENSEIGAF-----VIRITSSDQDIGANANVSYSFTGNPSNKFAIDPLSGNVTVAG 2846
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 14/82 (17%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
YSI GN F + +P + +I T+ +DRE V Y L+I A D
Sbjct: 3426 YSIIGGNVGQAFKV-DPQSGDIE------------TAKFLDRESVPSYELIIGAIDTGSP 3472
Query: 90 NK-AETHVTVDVLDENDNSPVF 110
+ V +++LD NDN PVF
Sbjct: 3473 PQTGSATVKIELLDVNDNGPVF 3494
Score = 37.4 bits (85), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVF 110
+ T+G +DREE A YSL ++A G+ T + +LD NDN P F
Sbjct: 818 ISTAGCLDREEQAYYSLKVSAR--AGLAYGVTTANITILDINDNPPRF 863
>gi|195383702|ref|XP_002050565.1| GJ22222 [Drosophila virilis]
gi|194145362|gb|EDW61758.1| GJ22222 [Drosophila virilis]
Length = 3596
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 20/154 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK----AETHVTVDVLDENDNSPVFS 111
+S+SGV+ T +DRE Y L++TA+D+ A V V +LD+NDN P FS
Sbjct: 526 DSRSGVI-STRSSLDRETSDSYHLLVTASDMAAAQSERKTATASVLVKILDDNDNYPQFS 584
Query: 112 QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAV----PSNLVVIV 166
++ Y V + + ++NV+H + ATDAD G+ A + A+ + I
Sbjct: 585 ERTYTVQVPEDQWGDDNNVAH---------IRATDADQGNNAAIRYAIIGGNTQSQFSID 635
Query: 167 PQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSR 199
+G++ L + V Y L + A D SPSR
Sbjct: 636 SMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSR 669
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 39/181 (21%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
++TS +DRE + Y L +TA D + ++T V + V D NDN+P F +Y+ +
Sbjct: 959 IITSAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEISVTDVNDNAPAFKNPLYQSSI-- 1016
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA---VPSNLVVIVPQTGELL-- 173
L+ +L +S+ VSA+D D ++ Y L+ V VI P +G +
Sbjct: 1017 LEDALVG--------TSVIQVSASDPDIGLNGRIKYLLSDRDVEDGSFVIDPTSGTIRTN 1068
Query: 174 ------------LT------GDPP-SDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSP 214
LT G PP S VE ++ +E + SP +A + +++ NSP
Sbjct: 1069 KGLDRESVAIYHLTAIAVDKGSPPLSSTVEVQIRLEDVN-DSPPTFASDKITLYVPENSP 1127
Query: 215 V 215
V
Sbjct: 1128 V 1128
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 29/153 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI++ +DN A+ +S++G + T +DREE ++++ + A D
Sbjct: 724 ISYSISERDDNFPLAV------------DSRTG-WVQTIKPLDREEQSRFAFQVVAKD-G 769
Query: 88 GI--NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G+ A + V + V D NDN P F+ K Y VG+ + + + +V+AT
Sbjct: 770 GVPPKSASSSVVITVQDVNDNDPSFNPKYYEANVGEDQ----------PPGTPVTTVTAT 819
Query: 146 DADGD-KVAYKLAVPS--NLVVIVPQTGELLLT 175
D D D ++ Y+++ + I Q G L+T
Sbjct: 820 DPDEDSRLHYEISTGNTRGRFAITSQNGRGLIT 852
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 25/153 (16%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV-AQYSLVITATD 85
+V YSI G+D+++F+L R +E L+T ++D E ++ LV+ A
Sbjct: 1147 VVHYSIIGGDDSNSFSLVT------RPGSERAQ---LLTMTELDYESSRKRFELVVRAAS 1197
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
N A H+ + V D NDN+P D + N+ H+ IG + A
Sbjct: 1198 PPLRNDA--HIEILVTDVNDNAPELR---------DFQVIFNNFRDHFPS-GEIGRIPAF 1245
Query: 146 DAD-GDKVAYKLAVP--SNLVVIVPQTGELLLT 175
DAD DK+ Y++ +NL+ + +G L+L+
Sbjct: 1246 DADVSDKLNYRILSGNNANLLRLNSSSGGLILS 1278
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 23/105 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATDV 86
+RY+I GN F++ +S SG V LV +D E V Y LVI A D
Sbjct: 619 IRYAIIGGNTQSQFSI------------DSMSGDVSLVKP--LDYESVRSYRLVIRAQDG 664
Query: 87 KGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+++ T + V+V+D NDN+P RF + S+ NV
Sbjct: 665 GSPSRSNTTQLLVNVIDANDNAP-------RFYTSQFQESVLENV 702
>gi|119514215|gb|ABL75878.1| protocadherin 2G3 [Takifugu rubripes]
Length = 941
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 90/187 (48%), Gaps = 41/187 (21%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
RY I Q NDN + N V LV +DRE+ + +L++TA D
Sbjct: 169 RY-ILQKNDNFILSADN-------------KKVELVLENRLDREKQKEMNLLLTALDGGS 214
Query: 89 INKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
++ T V V VLD NDN+PVFSQ VY K+SL N + + VSATDA
Sbjct: 215 PQRSGTVVIHVTVLDANDNAPVFSQAVY-------KASLPEN---SPLDTVVMQVSATDA 264
Query: 148 D----GDKVAYKLAVPS----NLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQ 195
D GD V Y L S N+ +I +TGE+ ++G + D E +E+ ++A D
Sbjct: 265 DEGVNGD-VIYNLGHSSEDDANIFIINAKTGEIRVSG---TIDYEENTFFEMRIQAKDGL 320
Query: 196 SPSRYAR 202
+ YA+
Sbjct: 321 GLTSYAQ 327
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT+G +DRE V+ Y++ I+ATD ++ ++T + + V D NDN PVF ++ Y V
Sbjct: 399 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKT-LHLSVADINDNPPVFEEESYSAYVS 457
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + + S++ SVSA D D
Sbjct: 458 E----------NNRAGSTLCSVSAGDPD 475
>gi|395853844|ref|XP_003799409.1| PREDICTED: cadherin-3 [Otolemur garnettii]
Length = 833
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K P HE+ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 256 VVAYSI------HSQEPKEP--HELMFTVHRSTGTISVVSSGLDREKVPEYTLTIQATDM 307
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+PVF + Y
Sbjct: 308 DGDGSTTTAVAVVEILDANDNAPVFDPQKY 337
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DRE++A+Y L A G + E ++++ V D+ND+ P F+Q
Sbjct: 163 TIEKETGWLLLNK-PLDREKIAKYELFGHAVSENGASVEEPMNISIIVTDQNDHKPKFTQ 221
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
V+R V L+ L +S+ V+ATD D
Sbjct: 222 DVFRGSV--LEGVLPG--------TSVMQVTATDED 247
>gi|390460196|ref|XP_002745206.2| PREDICTED: protocadherin Fat 1 [Callithrix jacchus]
Length = 4541
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 120/292 (41%), Gaps = 40/292 (13%)
Query: 16 LVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVA 75
VA H V Y I GN F + NP + I +T +D E +
Sbjct: 1685 FVAMVTAHSQSSVVYEIKDGNIGEAFDI-NPHSGSI------------ITQKALDFETLP 1731
Query: 76 QYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK 135
Y+L++ T++ G++ T V V + DENDNSPVF+Q Y ++ + +S+NS V +
Sbjct: 1732 IYTLIVQGTNMAGLS-TNTTVLVHLQDENDNSPVFAQAEYTGLISE-SASVNSVVLTDRN 1789
Query: 136 FS-SIGSVSATDADGDKVAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELTVE 190
I + A + Y + PS + I TG L +L+ D + ++ TV+
Sbjct: 1790 VPLVIAAADADKDANALLVYHIVEPSVHSYFAIDSSTGALHTVLSLDYEETSI-FQFTVQ 1848
Query: 191 AHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKR- 249
HD+ +P +A A V + +ID P + PT R
Sbjct: 1849 VHDMGTPRLFAEYAANV-------------TIHVIDINDCPPVFARPLYEASLLLPTYRG 1895
Query: 250 -----IDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
++ ++ D ++++++ + EKF + +TV +R +
Sbjct: 1896 VKVITVNATDADSSAFSQLIYSITEGNIGEKFSVDHRTGALTVQNTTQLRSR 1947
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 108/248 (43%), Gaps = 51/248 (20%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + YSI GN++ F+L +SK+G + + G+
Sbjct: 3217 GTEVLQVYAASRDIEANADITYSIISGNEHGKFSL------------DSKTGAVFII-GN 3263
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L + ATD ++ T V+++V D NDNSPVFSQ Y ++ + + L
Sbjct: 3264 LDYESSHEYYLTVEATDGGTPSLSDVAT-VSINVTDINDNSPVFSQATYTAVISE-DAVL 3321
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
S+ +V A DADG + Y + + I P GE+ +T +
Sbjct: 3322 E---------QSVITVMADDADGPLNSHIHYSIIDGNRGSSFTIDPVRGEVKVTRLLDRE 3372
Query: 182 DVE-YELTVEAHDLQSPSR-------------------YAREPAQVWLQFNSPVLQDEQL 221
+ Y LTV+A D SP + ++RE V +Q N PV
Sbjct: 3373 TISGYTLTVQASDNGSPPKVNTTTVNIDVSDVNDNAPAFSRENYSVVIQENKPVGFSVLQ 3432
Query: 222 LQMIDRKS 229
L + DR S
Sbjct: 3433 LVVTDRDS 3440
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + P VRY I G+ + F + + +R T+
Sbjct: 45 ENSAAKTYV-GHPVKMGIYLTDPSWEVRYKIVSGDSENLFKAEEYVLGDFCFLRIRTKGG 103
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A T V V VLD ND P+FS Y
Sbjct: 104 NTAIL------NREVKDHYALIVKAVEKNTNVEARTKVRVQVLDTNDLRPLFSPTSYSV- 156
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +S+ VSATDAD + Y +++ I P +G ++LT
Sbjct: 157 ------SLPENTAIR---TSVARVSATDADIGTNGEFYYSFKDRTDMFAIHPSSGVVVLT 207
Query: 176 G 176
G
Sbjct: 208 G 208
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1174 LMYRITSGNPQGFFSI------------HPKTGLITTTSRKLDREQQDEHILEVTVTDNG 1221
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRF 117
K+ + V +LDENDN P F QK Y+
Sbjct: 1222 SPPKSTIARIIVKILDENDNKPQFLQKFYKI 1252
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 62/288 (21%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GN++ F + + ++G+L + S +DRE +Y+L IT D+
Sbjct: 754 YAISGGNEDSCFII------------DMETGMLKILS-PLDRETTDKYTLNITVYDLGIP 800
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
KA + V V+D NDN P F Q+ Y V + K + S I V ATD D
Sbjct: 801 QKAAWRLLDVAVVDANDNPPEFLQESYFVEVSEDK----------EVHSEIIQVEATDKD 850
Query: 149 ---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE--YELTVEAHDLQSPSRYARE 203
+V Y +++ I TG + + P +V+ + L +EA DL ARE
Sbjct: 851 LGPNGRVTYSFLTDTDVFSIDSTTGVVKIV-QPLDREVQPVHYLKIEARDL------ARE 903
Query: 204 PAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRI 263
Q+ F++ VL+ + + D P + + P R+ E EG +
Sbjct: 904 EPQL---FSTVVLK----VSLEDVNDNPP---------KFIPPNYRVKVRE--DLPEGTV 945
Query: 264 VFALEK------ETEREKFKIRDENPW-ITVDE-NGDVRVKKRWDFEE 303
V LE ++ + ++ + D VD+ +G VR+ ++ DFE+
Sbjct: 946 VMWLEASDPDLGQSGQVRYSLMDHGEGNFDVDKLSGAVRIVQQLDFEK 993
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 57/123 (46%), Gaps = 27/123 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N ++N + + +DRE+ Y L ITATD
Sbjct: 2954 VTYFITGGDALGQFAVEN-----VQNEWK------VYVKKPLDREQRDNYLLTITATD-- 3000
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD--LKSSLNSNVSHWKKFSSIGSVSAT 145
G ++ V V VLD NDNSPV + +Y + + L L I VSAT
Sbjct: 3001 GTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPEDALPGKL------------IMQVSAT 3048
Query: 146 DAD 148
DAD
Sbjct: 3049 DAD 3051
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 11/89 (12%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+ R++ AQ+ L +T +D +A T V V VL N N P F+Q Y K++ +
Sbjct: 426 VKRQQAAQFELEVTTSD----RRASTKVLVKVLGANSNPPEFTQTAY-------KAAFDE 474
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAYKLA 157
NV S+ +V + + V Y +A
Sbjct: 475 NVPVGTTVMSLSAVDPDEGENGYVTYSIA 503
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 107/262 (40%), Gaps = 39/262 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
VRYSI G+ F + T GV+ TS +DRE + Y L + ATD +
Sbjct: 1069 VRYSIRDGSGVGVFKIGEET------------GVI-ETSDRLDRESTSHYWLTVFATD-Q 1114
Query: 88 GINKAET--HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G+ + + V+V D NDN+P S+ VY V + + K S+ + A
Sbjct: 1115 GVVPLSSFIEIYVEVEDVNDNAPQTSEPVYYPEV----------MENSPKDVSVVQIEAF 1164
Query: 146 DADG---DKVAYKLAV--PSNLVVIVPQTGELLLTG---DPPSDDVEYELTVEAHDLQSP 197
D D D++ Y++ P I P+TG + T D D E+ L V D SP
Sbjct: 1165 DPDSSSNDRLMYRITSGNPQGFFSIHPKTGLITTTSRKLDREQQD-EHILEVTVTDNGSP 1223
Query: 198 SRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVR-PTKRIDFSETD 256
+ A++ ++ Q LQ K P R + R A R P R+ + D
Sbjct: 1224 PK--STIARIIVKILDENDNKPQFLQKF-YKIRLPEREKPDRERNARREPVYRVIAGDKD 1280
Query: 257 GEMEGRIVFALEKETEREKFKI 278
I +++E E KF I
Sbjct: 1281 EGPNAEISYSIEDGNELGKFFI 1302
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
++ + +D E+ + Y+L + ATD G N T V + V+D ND+ P FS Y ++
Sbjct: 1411 VIVAKPLDAEQKSDYNLTVEATD--GTNTILTQVFIKVIDTNDHRPQFSTSKYEVVI 1465
>gi|328714327|ref|XP_001943434.2| PREDICTED: hypothetical protein LOC100158675 [Acyrthosiphon pisum]
Length = 1283
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 40/203 (19%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD--IDREEVAQYSLVI 81
P VRY+ G N + L +P T GV++V++ + DREE A+Y L +
Sbjct: 525 PFGSVRYTAVSGFKNSSLVL-DPIT-----------GVIVVSNDNHGFDREESAEYRLTV 572
Query: 82 TATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG 140
A D+ G A T + + VLD ND +PVF +F++ + F+
Sbjct: 573 EARDMDGSGLATTVPLIIHVLDINDETPVFQDMPIQFVL----------TQDMRNFTERA 622
Query: 141 SVSATDADGDK----VAYKL--AVPSNLVVIVPQTGELLLTGD---------PPSDDVEY 185
+ A D D + V Y++ +N + P+TGEL ++ D ++
Sbjct: 623 FIKAIDKDAEAPNNVVRYEIINGNYNNRFTLNPETGELFISSDLYDSSRTRRDSTNSAFV 682
Query: 186 ELTVEAHDLQSPSRYAREPAQVW 208
LTV A+DL P R + +++
Sbjct: 683 VLTVRAYDLGVPHRSSTTQVRIY 705
>gi|326919108|ref|XP_003205825.1| PREDICTED: protocadherin Fat 1-like [Meleagris gallopavo]
Length = 4590
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 122/280 (43%), Gaps = 44/280 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I GN FA+ NP SGV+ V+ +D E + Y+L + T++
Sbjct: 1698 VVYEIKDGNIGDVFAI-NP-----------NSGVI-VSQKALDFETLPVYTLTVQGTNMA 1744
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G+ T V V + DENDN P+F Q Y ++ + +S+NS V K + + A DA
Sbjct: 1745 GLTTNAT-VLVHLRDENDNIPIFMQSEYTGLISE-SASVNSVVLTDKNVPLV--IRAMDA 1800
Query: 148 DGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQSPSRY 200
D + + Y++ PS I TG + L++ D ++ + +V+ HD+ P Y
Sbjct: 1801 DKESNALLVYQIVEPSVRKYFAIDSSTGAIRTLMSLDYEETNI-FHFSVQVHDMGIPRLY 1859
Query: 201 AREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKR------IDFSE 254
A A V + ++D P + T + PT + ++ ++
Sbjct: 1860 AEYAANV-------------TIYVVDINDCPPVFSRELYDTSILVPTYKGVKVISVNATD 1906
Query: 255 TDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVR 294
D + ++++++ + EKF I + ITV +R
Sbjct: 1907 ADSGIFSQLIYSIIEGNIGEKFSINPKTGDITVQNTTQLR 1946
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 15/92 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ SK+G++ TS +DRE+ A++ L +T TD
Sbjct: 1175 LTYKITSGNPQGFFSIN------------SKTGLITTTSRKLDREQQAEHILEVTVTD-N 1221
Query: 88 GINKAET--HVTVDVLDENDNSPVFSQKVYRF 117
GI T V V VLDENDN P F QK Y+
Sbjct: 1222 GIPAKSTVARVIVKVLDENDNKPQFLQKFYKI 1253
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 90/198 (45%), Gaps = 30/198 (15%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L I AS + + YSI GN++ F++ +S +G + +
Sbjct: 3247 GTEVLQIHAASRDIEANAEITYSIVSGNEHGKFSI------------DSATGAIFIIDS- 3293
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+D E +Y L + ATD + ++ V ++V D NDN+PVFSQ Y ++ + + L
Sbjct: 3294 LDYESSHEYYLTVEATDGGTPSLSDVVTVNINVTDINDNTPVFSQDTYTAVISE-DAMLE 3352
Query: 128 SNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSDD 182
S+ +V A DADG + + Y + N I P GE+ +T +
Sbjct: 3353 ---------QSVITVMADDADGPSNNHIHYTITDGNQGNPFTIDPSRGEIKVTKLLDREK 3403
Query: 183 VE-YELTVEAHDLQSPSR 199
+ Y LTV+A D +P R
Sbjct: 3404 ISGYTLTVQASDNGNPPR 3421
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 119/289 (41%), Gaps = 66/289 (22%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N ++N + + +DREE Y L ITATD
Sbjct: 2955 VSYYITGGDLLGQFAVEN-----VQNEWK------VYVKKSLDREEKDHYLLNITATD-- 3001
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD--LKSSLNSNVSHWKKFSSIGSVSAT 145
G V V VLD NDNSPV + +Y IV + L L I VSAT
Sbjct: 3002 GTFATRAVVEVKVLDANDNSPVCEKALYTDIVPEDALPGKL------------IMQVSAT 3049
Query: 146 DAD---GDKVAYKLAVP-SNLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQSPSR 199
DAD ++ Y L P + + P TGEL L+ D V Y L ++A D R
Sbjct: 3050 DADIRSNAEITYTLHGPGAEKFRLTPDTGELKTLMPLDREQQAV-YYLLMKATD--GGGR 3106
Query: 200 YAREPAQVWLQF-----NSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSE 254
+ + A + L N+PV + P+ I T R+ ++
Sbjct: 3107 FCQ--ANIILTLEDVNDNAPVFTVD------------PYSITVFENTEPKTLLTRVQATD 3152
Query: 255 TDGEMEGRIVFALEKETEREKFKIRDENPWITVDE-NGDVRVKKRWDFE 302
D M +I ++L E + ++DE +G +R++K D E
Sbjct: 3153 ADAGMNRKIHYSLVNSAEGQ----------FSIDEFSGIIRLEKSLDRE 3191
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 61/119 (51%), Gaps = 21/119 (17%)
Query: 49 HEIRNSTES-------KSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDV 100
H I + TES S L++T+ +D E++ Q+ L+I A D + ++T +TVDV
Sbjct: 2322 HLIEDDTESHEYFHIDSSTGLILTTRTLDYEKIQQHKLLIRAIDGGMLPLSSDTVITVDV 2381
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA---DGDKVAYKL 156
D NDN P+F+Q VY + +L H+ + V A+DA D DK+ Y +
Sbjct: 2382 TDLNDNPPLFNQLVYEAKISELAPR-----GHF-----VTCVQASDADRSDADKLEYSI 2430
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 88/201 (43%), Gaps = 28/201 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTF-----ALKNPTTHEIRNSTE 56
ENS + T V G P+ + +P +RY I G++ + F L N IR
Sbjct: 46 ENSAAKTYV-GHPVKMGIYIVNPLWDLRYKIISGDNENLFKAEEYVLGNFCFLRIR---- 100
Query: 57 SKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYR 116
+K G + ++RE Y L + A + + T V V VLD ND P+FS Y
Sbjct: 101 TKGG----NTAILNREVKDHYMLTVKAVEKNTNAETRTKVRVQVLDTNDLRPLFSPTSYS 156
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELL 173
SL N + +SI VSATDAD + Y +++ I P +G ++
Sbjct: 157 V-------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKERTDVFAIHPTSGVVV 206
Query: 174 LTGDPPSDDVE-YELTVEAHD 193
LTG D + YE+ + A D
Sbjct: 207 LTGRLDYLDTKLYEMEILAVD 227
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y+IT GN + F + +P+ EI+ + +DRE+++ Y+L + A+D
Sbjct: 3371 IHYTITDGNQGNPFTI-DPSRGEIK------------VTKLLDREKISGYTLTVQASDNG 3417
Query: 88 GI-NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN PVFS+ Y I+
Sbjct: 3418 NPPRRNTTTVNIDVSDVNDNPPVFSKGNYSIII 3450
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 77/170 (45%), Gaps = 30/170 (17%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I+ GN++ +F + + +SG+L + S +DRE +Y+L +T D+
Sbjct: 755 YVISGGNEDSSFIV------------DMESGMLKILS-PLDREVKDKYNLNVTVYDLGIP 801
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K+ H+ + +LD NDN P F Q Y V + K LNS + + ATD D
Sbjct: 802 QKSAWHLLDIRILDANDNPPEFLQDSYFVEVSENK-ELNSEIIQ---------IEATDKD 851
Query: 149 ---GDKVAYKLAVPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEAHD 193
+V Y L ++ I TG + + G D V Y L +EA D
Sbjct: 852 LGANGEVKYSLLTDTDKFAINAVTGVVKVVGLLDHEEQPV-YFLKIEARD 900
>gi|324499552|gb|ADY39811.1| Protocadherin Fat 4 [Ascaris suum]
Length = 3167
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 115/258 (44%), Gaps = 47/258 (18%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
SG++ + S IDRE ++Y+L + A D G+ + T +T+ +LD+NDN+P+F++ ++F
Sbjct: 1341 SGIVTLISY-IDRETQSEYALNVRAMD--GVWQVRTSLTITILDQNDNAPIFTRDHFKFF 1397
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDK--VAYKLAVPSNLVVIVPQTGELLLT 175
V V++ S +G + A DAD GD V Y L + + P +G L++
Sbjct: 1398 V----------VNNAAVDSIVGRIEARDADSGDNGVVFYSLRCAQDRFTVDPSSG--LIS 1445
Query: 176 GDPPSDDVEYELTV---EAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
P + E+ + EA D P+ A ++ + N V+ + DR+ P
Sbjct: 1446 LSIPLGNYTNEVFMCEAEAIDGGMPALAAMATVEIIIVGNKIVVP-----RFADRR---P 1497
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGD 292
+ F+ G G ++ L+ E ++ + +DENG
Sbjct: 1498 Y------------------FALLAGSPNGTVIGQLKTEPPTYYMRVLVYDDRFAIDENGT 1539
Query: 293 VRVKKRWDFEELGPEKTI 310
+ + ++ E+G T+
Sbjct: 1540 LSTRSKFPTSEIGRSITL 1557
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 15/90 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y+I QG D FA+ +S+SG + V + +D EE A+Y+L + A D+
Sbjct: 813 ISYAIVQG-DTSLFAI------------DSQSGQMFVKAA-LDYEECAEYNLKVQAIDMG 858
Query: 88 GIN-KAETHVTVDVLDENDNSPVFSQKVYR 116
A H+TV V D NDN P+F YR
Sbjct: 859 TPRLSATVHITVIVEDINDNDPIFELPYYR 888
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 21/141 (14%)
Query: 69 IDREEVAQYSLVITATDVKGINK---AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+DRE A++ L IT TD + +K A T +TV+V+D NDN+P F F+ ++
Sbjct: 523 LDRESSAKHVLRITVTDQRPPHKVFSASTTLTVNVIDVNDNAPTFISSNTFFVFEEVPLG 582
Query: 126 LNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL---AVPSNLVVIVPQTGELLLTGDPP 179
+ +G V A DAD +V Y++ + P L ++ P G + + G
Sbjct: 583 -----------TLVGIVVAIDADFGNNAQVQYRIIPVSHPEALFIVDPILGYIQVNGRVD 631
Query: 180 SD-DVEYELTVEAHDLQSPSR 199
+ + LT+EA D SP R
Sbjct: 632 REKKAIHHLTIEASDGGSPIR 652
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 51/112 (45%), Gaps = 14/112 (12%)
Query: 5 KSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLV 64
K G K + ASS ++Y I G+ F++ NP T + L
Sbjct: 1093 KEGEAEKLITTFAASSSNISSYGIQYGIAGGDPFSDFSI-NPHTGQ------------LF 1139
Query: 65 TSGDIDREEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQKVY 115
T G ID E +Y L+I+ATD A T + V+V D NDN P+F Q +Y
Sbjct: 1140 TRGTIDYERRRRYRLLISATDQHNHPLVAFTSIVVNVEDVNDNRPIFDQILY 1191
>gi|91091750|ref|XP_968422.1| PREDICTED: similar to cadherin [Tribolium castaneum]
Length = 1516
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 71/147 (48%), Gaps = 27/147 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI GND F++ +KSGV+ V +DRE++ +Y L+I A D
Sbjct: 608 VTYSIVSGNDLRQFSIG------------AKSGVITVIR-KLDREDLTRYKLIIKAEDAG 654
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
++ T V + V D ND +P F Y F V K LNS +S+G V ATDA
Sbjct: 655 KLSSTAT-VNIKVTDINDKNPEFVGDPYNFSV---KEGLNS--------TSVGFVKATDA 702
Query: 148 D-GDKVAYKLAVPSNLVV-IVPQTGEL 172
D G ++PS L I +TGE+
Sbjct: 703 DEGINALVTYSIPSGLPFDIDNETGEI 729
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 11/112 (9%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ SGT VK L I+ + +H L + I GN+ T I N TE ++
Sbjct: 1000 ENATSGTKVKTLTIVNSRTHGGNIPL-KCLIISGNEQSTGG------KFIVNVTEDRNCA 1052
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKG-INK--AETHVTVDVLDENDNSPVF 110
L + +G ID E Y L + ++G INK + T VT++V+D NDN P F
Sbjct: 1053 LYL-NGTIDFETDESYQLEVQIMSLQGFINKEFSITLVTINVVDVNDNVPYF 1103
>gi|431892566|gb|ELK02999.1| Protocadherin alpha-12 [Pteropus alecto]
Length = 1581
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 26/166 (15%)
Query: 38 NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHV 96
N FAL + +N+ E S + LV +DREE+ ++SL++TA D K +
Sbjct: 957 NDYFAL------DTQNNREQTSSLSLVLRKSLDREEIQEHSLLLTAIDGGKPELTGTVQL 1010
Query: 97 TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVA 153
+ +LD NDN+P F+Q +YR V L+++ N + + ++ATD D D +
Sbjct: 1011 FITILDVNDNAPEFAQSIYRVRV--LENAFNGTL--------VIKLNATDPDDDINGDII 1060
Query: 154 YKLAVPS-----NLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
Y P N +I P +GE+ G ++ + YE++VEA D
Sbjct: 1061 YSFRRPVSPAVLNAFIINPNSGEIRTKGKLDFEENKLYEISVEATD 1106
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE VA Y LV+TA D + A V+V+V D NDN+PVF+Q Y V +
Sbjct: 391 LVLDSALDRESVANYELVVTARDGGSPSLSATASVSVEVADMNDNAPVFTQPEYTVFVKE 450
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKL 156
N H I +VSA DAD + V+Y L
Sbjct: 451 ----NNPPGCH------IFTVSARDADAQENALVSYSL 478
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE VA Y LV+TA D + A V+++V D NDN+P F+Q Y V +
Sbjct: 1189 LVLDSALDRESVANYELVVTARDGGSPSLSATASVSMEVADVNDNAPAFAQPEYTVFVKE 1248
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKL 156
N H I +VSA DAD + V+Y L
Sbjct: 1249 ----NNPPGCH------IFTVSAQDADAQENALVSYSL 1276
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 70/143 (48%), Gaps = 14/143 (9%)
Query: 63 LVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + ++++TA D K H+ + +LD NDN+P F + Y+ +
Sbjct: 178 LVLRKSLDREETPELNVLLTALDGGKPELTGSIHIKITILDVNDNAPEFDKLGYKVV--- 234
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDKVAY--KLAVPSN---LVVIVPQTGELLLTG 176
L NV + + + + + ++ Y ++ +P++ + I P+TGE+ + G
Sbjct: 235 ----LFENVPNDTRVIQLNASDLDEGLNSEITYGIRMILPASEKCMFSIDPKTGEIRIYG 290
Query: 177 DPP-SDDVEYELTVEAHDLQSPS 198
++ EYE+ V A D PS
Sbjct: 291 KLDFEENNEYEIHVNAIDKGIPS 313
>gi|18087787|ref|NP_444367.1| protocadherin beta 12 precursor [Mus musculus]
gi|13876284|gb|AAK26062.1| protocadherin beta 12 [Mus musculus]
gi|120538471|gb|AAI29839.1| Protocadherin beta 12 [Mus musculus]
gi|148678212|gb|EDL10159.1| mCG141300 [Mus musculus]
Length = 789
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 111/254 (43%), Gaps = 47/254 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT D+ H +TV V D NDN+P F+Q Y V +
Sbjct: 395 LVTEGPLDRESRAEYNITITVWDLGTPRLTTQHTITVQVADINDNAPAFTQTSYTLFVQE 454
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVP-------SNLVVIVPQTGE 171
NS H IG++SATD+D + Y L P ++LV I G+
Sbjct: 455 ----NNSPALH------IGTISATDSDSGSNAHITYSLLPPHDSQLALASLVSINSDNGQ 504
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQMIDR 227
L + ++ +EL V+A D SP+ ++ +V + NSP + L M +
Sbjct: 505 LFALRAMDYEMLQAFELHVDATDGGSPALSSQALVRVVVLDDNDNSPFV----LYPM--Q 558
Query: 228 KSEAPHRIEKRRVTRAVRP----TKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENP 283
+ AP + RA P TK + G+ + F L K TE F +
Sbjct: 559 NASAPC---TELLPRAAEPGYLITKVVAVDRDSGQ-NAWLSFQLLKATEPGLFSV----- 609
Query: 284 WITVDENGDVRVKK 297
W NG+VR +
Sbjct: 610 WA---HNGEVRTTR 620
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 58/120 (48%), Gaps = 17/120 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + +L +TA D ++ T V ++V+D NDN+P F Q +Y V +
Sbjct: 187 LVLDRALDREEQPELTLTLTALDGGSPPRSGTTEVHIEVVDINDNAPQFIQSLYEVQVPE 246
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNL---VVIVPQTGELLLT 175
S LN+ V VSATD D VAY L L VI TGE+ LT
Sbjct: 247 -NSPLNALVVM---------VSATDLDAGIYGNVAYSLFQGDGLSQPFVIDKITGEIRLT 296
>gi|410913747|ref|XP_003970350.1| PREDICTED: protocadherin gamma-A2-like [Takifugu rubripes]
Length = 805
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 89/184 (48%), Gaps = 35/184 (19%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
RY I Q NDN + N V LV +DRE+ + +L++TA D
Sbjct: 168 RY-ILQKNDNFILSADNKK-------------VELVLENRLDREKQKEMNLLLTALDGGS 213
Query: 89 INKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
++ T V V VLD NDN+PVFSQ VY K+SL N + + VSATDA
Sbjct: 214 PQRSGTVVIHVTVLDANDNAPVFSQAVY-------KASLPEN---SPLDTVVMQVSATDA 263
Query: 148 D----GDKVAYKLAVPS----NLVVIVPQTGELLLTGDPP-SDDVEYELTVEAHDLQSPS 198
D GD V Y L S N+ +I +TGE+ ++G ++ +E+ ++A D +
Sbjct: 264 DEGVNGD-VIYNLGHSSEDDANIFIINAKTGEIRVSGTIDYEENTFFEMRIQAKDGLGLT 322
Query: 199 RYAR 202
YA+
Sbjct: 323 SYAQ 326
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT+G +DRE V+ Y++ I+ATD ++ ++T + + V D NDN PVF ++ Y V
Sbjct: 398 LVTTGQLDRELVSDYNITISATDEGSPPLSSSKT-LHLSVADINDNPPVFEEESYSAYVS 456
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + + S++ SVSA D D
Sbjct: 457 E----------NNRAGSTLCSVSAGDPD 474
>gi|21711815|gb|AAM75098.1| SD07147p [Drosophila melanogaster]
Length = 1533
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 103/258 (39%), Gaps = 65/258 (25%)
Query: 3 NSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL 62
N SG VK I AS KH + Y + GN++ F + T
Sbjct: 1001 NENSGRDVKIGHIQAASRSKHNRDIFYYMLL-GNEDGAFYVDKLTGD------------- 1046
Query: 63 LVTSGDIDREEVAQYSLVITAT---------------DVKGINKAET--HVTVDVLDEND 105
+ T+ +DREE Y+L I A+ +K +N+ T V + VLD ND
Sbjct: 1047 IYTNKSLDREETDVYTLYILASIKADLHISEEERASFSIKTLNRDNTVAKVAITVLDVND 1106
Query: 106 NSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA-----------Y 154
N PVF + +Y + +N+N K ++I V+ATDAD K A Y
Sbjct: 1107 NPPVFEKPIYY-------AGVNANA---KMGAAITLVNATDADQGKNAKIEFMIVASNLY 1156
Query: 155 KLAVPSNLVVIVPQTGELLLTGDPPSDDV-------EYELTVEAHDLQSPSRYAREPAQV 207
K + IVP + G ++ + +EL + A +L+ P R A +
Sbjct: 1157 KFGATKSTGSIVPSPFAISQDGRISANTIMAEYNQDRFELEIVARELEQPQRSASTKVNI 1216
Query: 208 WLQFNSPVLQDEQLLQMI 225
W V QL+++I
Sbjct: 1217 W------VFDGTQLVRVI 1228
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 19/152 (12%)
Query: 54 STESKSG-VLLVTSGDIDREEVAQYSLVITATDVK--GINKAETH-VTVDVLDENDNSPV 109
S ++ +G V++ S +DRE++ + +L + A D + K+ T + +++LD NDN+PV
Sbjct: 709 SIDAYTGNVMVANSSILDREQIKELTLSVVAQDKAPAAVQKSATATIHINILDVNDNAPV 768
Query: 110 FSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPS--NLV 163
F++ VY S++ N + ++ +++ V A D D GD V Y + + L
Sbjct: 769 FTRDVY-------NSTVAENAA-YQPPAALLQVQAIDQDEGLYGD-VRYIITAGNEMGLF 819
Query: 164 VIVPQTGELLLTGDPPSDDVEYELTVEAHDLQ 195
+ Q+G + YELT+ A D Q
Sbjct: 820 KLDAQSGIVYPAQSLSGKHGAYELTISARDTQ 851
>gi|300796778|ref|NP_001179501.1| protocadherin Fat 2 precursor [Bos taurus]
Length = 4347
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 25/204 (12%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G PIL+ S+ V Y + +GN N F++ S SG L+ T +D
Sbjct: 1672 GSPILLISATSFSE--VTYELREGNKNGVFSMN------------SYSG-LISTQKKLDH 1716
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E+++ Y L I +++ G + V V ++DENDN+PVFS+ + VG + + N
Sbjct: 1717 EKISSYQLKIRGSNMAG-TFTDVMVLVYIIDENDNAPVFSKSTF---VGQISEAAPLNSM 1772
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EY 185
+ ++ + A+D+D + + YK+ P L + I P G L + + + +
Sbjct: 1773 IMDENNNPLVIRASDSDKEANSLLVYKILEPETLKFLKIDPSMGTLTTVLEMDYESMPSF 1832
Query: 186 ELTVEAHDLQSPSRYAREPAQVWL 209
+ HD SP +A AQV +
Sbjct: 1833 RFDIYVHDQGSPILFAPRAAQVII 1856
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 90/199 (45%), Gaps = 31/199 (15%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS+ G V L L A + Q+ Y IT+G+ F + E R
Sbjct: 2914 VENSEPGEPVATLKTLDADIAEQNRQVTCY-ITEGDPLGQFGISQ-VGDEWR-------- 2963
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+ + +DRE A+Y L ITA+D G +A V + VLD NDNSP SQ +Y
Sbjct: 2964 --IFSRKTLDREHTAKYLLRITASD--GKFQASVPVEIFVLDINDNSPQCSQLLYTG--- 3016
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-SNLVVIVPQTGEL--LL 174
K S + H+ I VSATD D D ++ Y L P ++ + P TG+L L
Sbjct: 3017 --KVSEDVPPEHF-----ILKVSATDLDSDTNAQITYSLHGPGADEFKLDPHTGDLTTLT 3069
Query: 175 TGDPPSDDVEYELTVEAHD 193
D DV Y L +A D
Sbjct: 3070 ALDREKKDV-YSLVAKATD 3087
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 71/163 (43%), Gaps = 28/163 (17%)
Query: 23 HPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSL 79
+P VRY I G+ + F + +R T+S + LL +RE Y+L
Sbjct: 60 NPQWAVRYRIISGDVANVFKTEEYVVGNFCFLRIRTKSSNTALL------NREVRDSYTL 113
Query: 80 VITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD---LKSSLNSNVSHWKKF 136
+I AT+ +A V V +LD+ND P+FS YR + + LK
Sbjct: 114 IIQATEKTLELEALARVVVRILDQNDLKPLFSPPSYRVTISEDMPLK------------- 160
Query: 137 SSIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTG 176
S I VSATDAD + A Y S + I P +G + L G
Sbjct: 161 SPICKVSATDADLGQNAEFYYAFNTRSEMFAIHPTSGVVTLAG 203
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 28/169 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN+ F + E ++G LL + +D E + Y L +T D+
Sbjct: 748 YVIADGNEEGCFDI------------ELETG-LLTVAAPLDYEATSFYVLNVTVYDLGTP 794
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K+ +TV+V D NDN+P F Y+ + + ++ V +++ + A D D
Sbjct: 795 QKSSWKLLTVNVEDWNDNAPRFPPGGYQVTISE-----DTEVG-----TTVAELKAKDVD 844
Query: 149 GD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSD-DVEYELTVEAHD 193
+ +V Y L P+ + P TGE+++TG + + Y L VEA D
Sbjct: 845 SEDNGRVRYVLLSPTEKFSLHPLTGEMVVTGHLDRESEPRYILKVEARD 893
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
+T+ K+GVL VT G +D E ++ + ATD + +E V V V D NDN P FSQ
Sbjct: 2213 TTDFKTGVLTVT-GPLDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQL 2271
Query: 114 VY 115
VY
Sbjct: 2272 VY 2273
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 31/123 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ ++IT GN F L +P T LL T+ +DRE ++ L +T D
Sbjct: 1168 LTFNITSGNHMGFFVL-HPLTG------------LLATARQLDRENKDEHILEVTVLDNG 1214
Query: 88 GIN-KAETHVTVDVLDENDNSPVFSQK-----------------VYRFIVGDLKSSLNSN 129
+ ++ + V V + D NDN PVFS K VYR + DL LN
Sbjct: 1215 EPSLRSTSRVVVRIADVNDNPPVFSHKLFNVRLPERLNPGTSGPVYRLVASDLDEGLNGR 1274
Query: 130 VSH 132
V++
Sbjct: 1275 VTY 1277
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 30/188 (15%)
Query: 26 QLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
++V +T N + LK P++ +++G L+ T+ +D + AQY L I +
Sbjct: 376 RVVMVKVTPAFPNLKYVLK-PSSESAAFKLNARTG-LITTTKLMDFHDQAQYQLRIRTS- 432
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G+ A T V +D++D N+++PVF++ Y + + N+ +S+ +V+AT
Sbjct: 433 -PGL--ASTTVVIDIMDCNNHAPVFNRSSY-------DGTFDENI---PPGTSVLTVTAT 479
Query: 146 DADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT-------VEAHDLQ 195
D D + + Y + P+ + + ++ T P ++YEL V A D
Sbjct: 480 DQDHGENGYITYSITRPNAVPFSIDPYLGIISTSKP----MDYELMNRIYTFRVRASDWG 535
Query: 196 SPSRYARE 203
SP R +E
Sbjct: 536 SPFRQEKE 543
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 123/293 (41%), Gaps = 58/293 (19%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQL---VRYSITQGNDNHTFALKNPTTHEIRNSTESK 58
ENS SGT V +V ++H L ++Y + G F++ T
Sbjct: 1039 ENSPSGTSV-----MVVAAHDDDTGLDGELQYFLRGGTGLAAFSINQDTG---------- 1083
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRF 117
++ T +DRE + Y L + A D I + T V ++VLD NDN P S+ V+
Sbjct: 1084 ---MIQTLAPLDREFASCYWLTVLAVDRGSIPLSSVTEVYIEVLDVNDNPPQMSRPVFYP 1140
Query: 118 IVGDLKSSLNSNVSHWKKF----SSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELL 173
V + + L+++V + SS G ++ G+ + + V+ P TG LL
Sbjct: 1141 TVRE-DAPLHTSVLQLDAWDLDSSSKGKLTFNITSGNHMGF--------FVLHPLTG-LL 1190
Query: 174 LTG---DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQF-----NSPVLQDEQLLQMI 225
T D + D E+ L V D PS R ++V ++ N PV +L +
Sbjct: 1191 ATARQLDRENKD-EHILEVTVLDNGEPS--LRSTSRVVVRIADVNDNPPVFS-HKLFNV- 1245
Query: 226 DRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKI 278
R+ +R P R+ S+ D + GR+ +++E E++ F I
Sbjct: 1246 --------RLPERLNPGTSGPVYRLVASDLDEGLNGRVTYSIE-ESDEAGFSI 1289
>gi|195120792|ref|XP_002004905.1| GI19343 [Drosophila mojavensis]
gi|193909973|gb|EDW08840.1| GI19343 [Drosophila mojavensis]
Length = 3570
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 20/154 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK----AETHVTVDVLDENDNSPVFS 111
+S+SGV+ T +DRE Y L++TA+D+ A V V +LD+NDN P FS
Sbjct: 523 DSRSGVI-STRSSLDREASDSYHLLVTASDMAAAQSERKTATASVMVKILDDNDNYPQFS 581
Query: 112 QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAV----PSNLVVIV 166
++ Y V + W +++ + ATDAD G+ A + A+ + I
Sbjct: 582 ERTYTVQVPE---------DQWGDDNTVAHIRATDADQGNNAAIRYAIIGGNTQSQFSID 632
Query: 167 PQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSR 199
+G++ L + V Y L + A D SPSR
Sbjct: 633 SMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSR 666
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 39/181 (21%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
++TS +DRE + Y L +TA D + ++T V + V D NDN+P F +Y+ +
Sbjct: 956 IITSAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEISVTDVNDNAPAFKNPLYQASI-- 1013
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA---VPSNLVVIVPQTGELL-- 173
L+ +L +S+ VSA+D D ++ Y L+ V VI P +G +
Sbjct: 1014 LEDALVG--------TSVIQVSASDPDIGLNGRIKYLLSDRDVEDGSFVIDPTSGTIRTN 1065
Query: 174 ------------LT------GDPP-SDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSP 214
LT G PP S VE ++ +E + SP +A + +++ NSP
Sbjct: 1066 KGLDRESVATYHLTAIAVDKGSPPLSSTVEVQIRLEDVN-DSPPTFASDKITLYVPENSP 1124
Query: 215 V 215
V
Sbjct: 1125 V 1125
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 32/174 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI++ +DN A+ ++++G + T +DREE +++ + A D
Sbjct: 721 ISYSISERDDNFPLAV------------DARTG-WVQTIKPLDREEQNRFAFQVVAKD-G 766
Query: 88 GI--NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G+ A + V + V D NDN P F+ K Y VG+ + + + +V+AT
Sbjct: 767 GVPPKSASSSVVITVQDVNDNDPSFNPKYYEANVGEDQ----------PPGTPVTTVTAT 816
Query: 146 DADGD-KVAYKLAVPS--NLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHD 193
D D D ++ Y+++ + I Q G L+T P D + + LTV A D
Sbjct: 817 DPDEDSRLHYEISTGNTRGRFAITSQNGRGLITIAQPLDYKQEKRFLLTVTATD 870
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 25/153 (16%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV-AQYSLVITATD 85
+V YSI G+D+++F+L R +E L+T ++D E ++ LV+ A
Sbjct: 1144 VVHYSIIGGDDSNSFSLVT------RPGSERAQ---LLTMTELDYESSRKRFELVVRAAS 1194
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
N A H+ + V D NDN+P D + N+ H+ IG + A
Sbjct: 1195 PPLRNDA--HIEILVTDVNDNAPELR---------DFQVIFNNFRDHFPS-GEIGRIPAF 1242
Query: 146 DAD-GDKVAYKLAVP--SNLVVIVPQTGELLLT 175
DAD DK+ Y++ +NL+ + +G L+L+
Sbjct: 1243 DADVSDKLNYRILSGNNANLLRLNSSSGGLILS 1275
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 23/105 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATDV 86
+RY+I GN F S +S SG V LV +D E V Y LVI A D
Sbjct: 616 IRYAIIGGNTQSQF------------SIDSMSGDVSLVKP--LDYESVRSYRLVIRAQDG 661
Query: 87 KGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+++ T + V+V+D NDN+P RF + S+ NV
Sbjct: 662 GSPSRSNTTQLLVNVIDANDNAP-------RFYTSQFQESVLENV 699
>gi|270001289|gb|EEZ97736.1| protocadherin 15 [Tribolium castaneum]
Length = 1539
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 71/147 (48%), Gaps = 27/147 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI GND F++ +KSGV+ V +DRE++ +Y L+I A D
Sbjct: 631 VTYSIVSGNDLRQFSIG------------AKSGVITVIR-KLDREDLTRYKLIIKAEDAG 677
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
++ T V + V D ND +P F Y F V K LNS +S+G V ATDA
Sbjct: 678 KLSSTAT-VNIKVTDINDKNPEFVGDPYNFSV---KEGLNS--------TSVGFVKATDA 725
Query: 148 D-GDKVAYKLAVPSNLVV-IVPQTGEL 172
D G ++PS L I +TGE+
Sbjct: 726 DEGINALVTYSIPSGLPFDIDNETGEI 752
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 11/112 (9%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ SGT VK L I+ + +H L + I GN+ T I N TE ++
Sbjct: 1023 ENATSGTKVKTLTIVNSRTHGGNIPL-KCLIISGNEQSTGG------KFIVNVTEDRNCA 1075
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKG-INK--AETHVTVDVLDENDNSPVF 110
L + +G ID E Y L + ++G INK + T VT++V+D NDN P F
Sbjct: 1076 LYL-NGTIDFETDESYQLEVQIMSLQGFINKEFSITLVTINVVDVNDNVPYF 1126
>gi|410956898|ref|XP_003985073.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Felis catus]
Length = 4915
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+RYSI+ GN+ FA+ S +G+L + +D E ++ + ITATD
Sbjct: 3093 LIRYSISSGNEEGIFAIN------------SSTGILTLAKA-LDYELCQKHEMTITATDG 3139
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + VTV+V+D NDNSPVF Y V + + +++ ++AT
Sbjct: 3140 GWVARTGYCSVTVNVIDVNDNSPVFFPDEYFPTV----------LENAPSGTTVIHLNAT 3189
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
DAD +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 3190 DADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQG---FLDFETKQSYHLTVKAFNVPDE 3246
Query: 198 SRYAREPAQVWLQ 210
R + + L+
Sbjct: 3247 ERCSFATVNIQLK 3259
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 85/185 (45%), Gaps = 40/185 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+ YS+ +GN+ FA+ +S SG V L+ G +D E YSLVI A D
Sbjct: 1244 LIHYSVMKGNEERQFAI------------DSTSGQVTLI--GKLDYEATPAYSLVIQAVD 1289
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
I+ T + +D+LDENDN+P F KS+L +V + + SV+
Sbjct: 1290 SGAISLNSTCTLNIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVT 1338
Query: 144 ATDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
ATD+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1339 ATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQ 1395
Query: 195 QSPSR 199
P R
Sbjct: 1396 GRPPR 1400
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 84/176 (47%), Gaps = 31/176 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN H+F + N T EIR+ +DRE+++QY L I +
Sbjct: 2669 PNGQLDYEIVNGNKEHSFTI-NHATGEIRSIRS------------LDREKISQYVLTIKS 2715
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D KG T V V ++LDENDN+P FSQ ++ NS + + ++
Sbjct: 2716 SD-KGSPSQSTSVKVIINILDENDNAPRFSQIFSAYV------PENSPLGY-----TVTR 2763
Query: 142 VSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ +D D A Y + S I P TG+++++ +D + Y + V AHD
Sbjct: 2764 VTTSDEDIGVNAISRYSITDTSLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2819
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V+YSI+ G+ + R ++SGV+ T +DREE Y L I ATD
Sbjct: 724 VKYSISAGDRS-------------RFQVNAQSGVI-STRMALDREEKTAYQLQIVATDGG 769
Query: 88 GINKA-ETHVTVDVLDENDNSPVFSQKVYRFI----------VGDLKSS---LNSNVSHW 133
+ + VT+ VLD DN PVFSQ Y F+ VG + +S LN+N+S+
Sbjct: 770 NLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFENVALGYHVGSVSASTMDLNANISYL 829
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 84/188 (44%), Gaps = 26/188 (13%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I QGN+ F L N + + + LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIIQGNEAGRFRLD-----ITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KGE 227
Query: 90 NKAETH--VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
K + V V V D NDN PVF Y+ V + ++ V SS+ V+A DA
Sbjct: 228 PKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE-----DAAVG-----SSVLQVAAADA 277
Query: 148 D---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSPSRYA 201
D + Y+L + P+TG L+T P D +Y LTV+A D PS
Sbjct: 278 DEGTNADIRYRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTVQAMDRGVPSLTG 335
Query: 202 REPAQVWL 209
R A + L
Sbjct: 336 RAEALIQL 343
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ Y+L + ATD KG + T V V VLD NDN+PVF Q +Y+
Sbjct: 2077 TGELDREEVSNYTLTVVATD-KGQPALSSSTEVVVMVLDINDNNPVFVQALYK 2128
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 71/174 (40%), Gaps = 29/174 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ T L T+ IDREE + Y L + A+
Sbjct: 826 ISYLITTGDQKGMFAINQVTGQ-------------LTTASVIDREEQSFYQLKVVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V D NDNSP F Q V S+N V +W+ SI A D
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAV---------ESVNV-VENWQAGHSIFQAKAVDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSP 197
D V Y L P NL I + G + L G Y++ + A D+ P
Sbjct: 921 DEGVNGMVLYSLKQNPKNLFTINEKNGNISLLGPLDVHAGSYQIEIVASDMGVP 974
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1722 GDGSKIMQLTAMDADEGANALVTYTIISGADD-SFRI------------DPESGDLIATK 1768
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND++P FS+ VY F
Sbjct: 1769 -RLDRERRSKYSLLVRADD--GLQSSDMRINITVSDVNDHTPKFSRPVYSF 1816
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 85/191 (44%), Gaps = 31/191 (16%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L ++ + P+ + Y + GN+++ F L S SG L VT +DRE
Sbjct: 2248 LQVVARDDDQGPNSKLSYVLFGGNEDNAFTL-------------SASGELQVTQ-SLDRE 2293
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+ L+ITATD G T++V+ D NDN P F+ K+Y + +
Sbjct: 2294 TKEHFVLMITATD-SGSPALTGTGTINVIVDDVNDNVPTFASKMYFTTIPE--------- 2343
Query: 131 SHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YE 186
+ + V+A+DAD ++Y++ ++ I P TG+++ + + E Y
Sbjct: 2344 -DAPTGTDVLLVNASDADASTNAVISYRIIGGNSQFTINPSTGQIITSALLDRETKENYT 2402
Query: 187 LTVEAHDLQSP 197
L V + D SP
Sbjct: 2403 LVVVSSDAGSP 2413
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 35/177 (19%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKV 114
K+G + V SG +DRE+ + SL + A + ++G + E V V VLD ND P+FS +
Sbjct: 3321 KTGQIYV-SGLLDREKEERVSLKVLAKNSGSIRGADIDEVTVNVTVLDAND-PPIFSLNI 3378
Query: 115 YRFIVGD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLV 163
Y + + S+ +S+ V W +FS IGS + A
Sbjct: 3379 YSVQISEGVPTGTHVTFVSAFDSDSVPSWSRFSYFIGSGNENGA---------------F 3423
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
I PQTG++ +T + + + Y LTV A D +PS V L+ N P+L
Sbjct: 3424 SINPQTGQITVTAELDRETLPVYNLTVLAIDSGTPSATGSASLLVTLEDINDNGPML 3480
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVF 110
L T +DREE A YSL++ ATD+ ++ + V +LD NDNSPVF
Sbjct: 641 LSTVTSLDREEQAFYSLLVLATDLGSPPQSSMARINVSLLDMNDNSPVF 689
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 16/115 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + + A + + VRY I GN N F + +S +G
Sbjct: 2133 ENTLTGTDI--IQVYAADGDEGTNGQVRYGIVDGNANQEFRI------------DSVTGA 2178
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
+ V +DRE+ YSL + ATD + +T V++ +LD ND P+F Y
Sbjct: 2179 ITVAK-PLDREKTPTYSLTVQATDRGSNPRTDTSTVSIVLLDINDFVPMFELSPY 2232
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 111/282 (39%), Gaps = 61/282 (21%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ + RYSIT + T NP+T +I V S ++RE+ +Y + ++A
Sbjct: 2774 NAISRYSITDTSLPFTI---NPSTGDI------------VISRPLNREDTDRYRIRVSAH 2818
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
D T VT+ V D NDN+P FS+ Y +L + + S V+ VSA
Sbjct: 2819 DSGW--TVSTDVTIFVTDVNDNAPRFSRPSYYLDCPEL-TEIGSKVTQ---------VSA 2866
Query: 145 TDAD---GDKVAYKLAVPSNLVVIVPQTGELL---------LTGDPPSDDVEYELTVEAH 192
TD D +V Y + S I TGE+ ++G + + V +
Sbjct: 2867 TDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQVLKYQNVSGTSNVNINRHSFIVTSS 2926
Query: 193 DLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRR---VTRAVR-PTK 248
D +PS + + +D AP ++ + VT+ V+ TK
Sbjct: 2927 DRGNPSLLSETTVTI---------------NTVDSNDNAPQFLKGKYFTPVTKNVKVGTK 2971
Query: 249 RIDFSETDGE---MEGRIVFALEKETEREKFKIRDENPWITV 287
I + D + + + + E KFK+ + WI+V
Sbjct: 2972 LIKVTAVDDRDFGLNSEVEYLISNENHFGKFKLDNSTGWISV 3013
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 82/184 (44%), Gaps = 31/184 (16%)
Query: 30 YSITQGND--NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+++T +D N A + + T K+GVL V +DRE + Y+LV+ A D+
Sbjct: 1934 FNVTDADDGINSQLAYSIASGDSLGQFTVDKNGVLKVLK-SLDRESQSFYNLVVQAHDLP 1992
Query: 88 GINKAE----THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV- 142
+ + HV++ +LD NDN P F L+ +++ + + I ++
Sbjct: 1993 QLPASRFTSTAHVSIILLDVNDNPPTF---------------LSPKLTYIPENTPIDTIV 2037
Query: 143 ---SATDADG---DKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDL 194
ATD D + Y L P N I GE+ LTG+ ++V Y LTV A D
Sbjct: 2038 FKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDK 2097
Query: 195 QSPS 198
P+
Sbjct: 2098 GQPA 2101
Score = 37.4 bits (85), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 28/155 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN++ GT V L + A S + + I GN+ F E+++S +
Sbjct: 369 ENAQVGTVVALLTVTDADS-PAANGNISVQILGGNEQRHF--------EVQSSKVPNLSL 419
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGI--------NKAETHVTVDVLDENDNSPVFSQK 113
+ V S +DRE + Y+L ++ +D G + + + V D ND+ PVF+Q+
Sbjct: 420 IKVASA-LDRERIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPVFAQQ 478
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
VYR + + S + VSATD D
Sbjct: 479 VYRVNLSE----------EAPPGSYVSGVSATDGD 503
>gi|269914107|ref|NP_001013033.2| protocadherin beta-9 precursor [Pan troglodytes]
Length = 797
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 71/149 (47%), Gaps = 22/149 (14%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ IT TD+ K E +T+ V D NDN+P F+Q Y V
Sbjct: 402 ILMTEGALDRESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVR 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H +GSVS TD D +V Y L P ++LV I G
Sbjct: 462 E----NNSPALH------VGSVSPTDGDSGTNAQVTYSLLPPQDPHLPLASLVSINADNG 511
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 512 HLFALRSLDYEALQAFEFRVGATDRGSPA 540
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + SL +TA D +++ T + + VLD NDN+P F+Q +Y +
Sbjct: 194 LVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALY-----E 248
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVV----IVPQTGELLL 174
++ NS V S I VSA DAD +V+Y S ++ I P +GE+ L
Sbjct: 249 TQAPENSPVG-----SRIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPSSGEIFL 303
>gi|62510877|sp|Q5DRC4.1|PCDB9_PANTR RecName: Full=Protocadherin beta-9; Short=PCDH-beta-9; Flags:
Precursor
Length = 797
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 71/149 (47%), Gaps = 22/149 (14%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ IT TD+ K E +T+ V D NDN+P F+Q Y V
Sbjct: 402 ILMTEGALDRESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPAFTQTSYTLFVR 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H +GSVS TD D +V Y L P ++LV I G
Sbjct: 462 E----NNSPALH------VGSVSPTDGDSGTNAQVTYSLLPPQDPHLPLASLVSINADNG 511
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 512 HLFALRSLDYEALQAFEFRVGATDRGSPA 540
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + SL +TA D +++ T + + VLD NDN+P F+Q +Y +
Sbjct: 194 LVLDKALDREEQEELSLTLTALDGGSPSRSGTSTIRIVVLDVNDNAPQFAQALY-----E 248
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVV----IVPQTGELLL 174
++ NS V S I VSA DAD +V+Y S ++ I P +GE+ L
Sbjct: 249 TQAPENSPVG-----SRIVKVSAGDADSGVNAEVSYSFFDASEDILTTFQINPSSGEIFL 303
>gi|149726811|ref|XP_001502300.1| PREDICTED: protocadherin beta-1-like [Equus caballus]
Length = 818
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 76/140 (54%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE A+ +L ITA D K+ T H+ V+VLD ND+ P FS+ VYR V +
Sbjct: 194 LVLDKPLDREEQAEVNLTITAVDGGSPPKSGTAHIRVEVLDVNDHVPQFSRLVYRAQVPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVV----IVPQTGELLL 174
+S N ++ + V+ATD D ++ Y LA + ++ I PQTGE+ L
Sbjct: 254 --NSANGSL--------VAVVTATDLDEGSNKEITYSLAQNTEAILQTFQIDPQTGEVRL 303
Query: 175 TGDPPSDDVE-YELTVEAHD 193
G + +E Y++ ++A D
Sbjct: 304 RGPLDFEAIETYDIDIQATD 323
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 58/124 (46%), Gaps = 26/124 (20%)
Query: 41 FALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDV 100
FA+K PT RNS LVT +DREEV+ Y++ + A D G T ++V
Sbjct: 392 FAVK-PT---FRNSYS------LVTDRGLDREEVSGYNITLVAVDT-GPPSLSTETVIEV 440
Query: 101 L--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYK 155
L D NDN PVF + Y V + N++ + + IG V A D D +V Y
Sbjct: 441 LISDINDNPPVFQEDSYILTVRE-----NNSPAVF-----IGKVHAEDLDLGENAQVTYS 490
Query: 156 LAVP 159
L P
Sbjct: 491 LLPP 494
>gi|348514383|ref|XP_003444720.1| PREDICTED: protocadherin Fat 3-like [Oreochromis niloticus]
Length = 1598
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 79/154 (51%), Gaps = 21/154 (13%)
Query: 50 EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSP 108
+++N + V +V +DRE SL++TA D + T + + VLD NDN+P
Sbjct: 176 KLQNQQDGSKKVEMVLQKHLDREAQQHLSLILTAVDGGEPQLSGTVRIEISVLDANDNAP 235
Query: 109 VFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLA-----VPS 160
VF+Q+VY+ + + + K + + +VSATDAD KV Y + VP
Sbjct: 236 VFTQEVYKVTI----------MENAAKGAILCTVSATDADEGSYGKVIYSITNTLDDVPV 285
Query: 161 NLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
+ I ++GE+ LTG+ + + YE+ V+A D
Sbjct: 286 -MFHIAEESGEVSLTGNLDYEKAQLYEIHVQASD 318
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 73/150 (48%), Gaps = 27/150 (18%)
Query: 19 SSHKHPHQLVRYSITQGNDN------HTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
S H P+ +V Q D+ H F N TH + + S + LVT D+DRE
Sbjct: 1340 SEHSKPNTVVAMMNVQDPDSNENGKVHCFI--NDNTH-LSIKSASHNFYSLVTDSDLDRE 1396
Query: 73 EVAQYSLVITATDVKGINKAETHV--TVDVLDENDNSPVFSQKVYR-FIVGDLKSSLNSN 129
++Y++++T +D +G+ + V T+ + D NDN+PVF + Y +IV + L
Sbjct: 1397 RTSEYNIIVTCSD-EGVPSLSSSVTLTLQISDVNDNAPVFERSSYEAYIVENNTPGL--- 1452
Query: 130 VSHWKKFSSIGSVSATDAD---GDKVAYKL 156
SI +V ATDAD +V+Y L
Sbjct: 1453 --------SIFTVKATDADWNQNARVSYIL 1474
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 19/142 (13%)
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIV 119
V +V +DRE+ SL++TA D + T + V VLD NDN+P F++ +YR
Sbjct: 687 VEMVLQKPLDREKKDYLSLLLTAMDGGEPQMSGTMQIFVTVLDANDNAPTFAKPLYR--- 743
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA----VPSNLVVIVPQTGEL 172
+ L N K +S+ +VSA+D D +++Y ++ + S L I +TGE+
Sbjct: 744 ----AKLQEN---SPKGTSVTTVSASDKDIGSNGELSYLISTSKRIVSELFNINLKTGEI 796
Query: 173 LLTGDPPSDDV-EYELTVEAHD 193
+L G+ + Y++ +E D
Sbjct: 797 ILVGEIDYEKANSYQIDIEVVD 818
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 18/106 (16%)
Query: 57 SKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHV--TVDVLDENDNSPVFSQKV 114
SK LVT D+DRE + Y++ +T +D +G+ + V T+ + D NDN PVF +
Sbjct: 393 SKKFFSLVTDSDLDRERASNYNITVTCSD-EGVPSLSSSVTLTLQISDVNDNEPVFERSS 451
Query: 115 YR-FIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL 156
Y +IV + L SI +V ATDAD +V+Y L
Sbjct: 452 YEAYIVENNTPGL-----------SIFTVKATDADWNQNARVSYIL 486
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 19/134 (14%)
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE+ SLV+TA D + T + + VLD NDN+PVF+Q Y V
Sbjct: 1183 LDREKEESISLVLTAFDGGDPQMSGTIRIFITVLDANDNAPVFTQSTYTATV-------- 1234
Query: 128 SNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSN------LVVIVPQTGELLLTGDPPS 180
+ + + + SVSA+DAD G K ++ ++ L I ++GE+ L G+
Sbjct: 1235 --FENAPEGTVVTSVSASDADHGSNGRIKYSITNSLDQAHALFQIHEESGEIKLIGNIDY 1292
Query: 181 DDV-EYELTVEAHD 193
++ Y + + A D
Sbjct: 1293 ENARNYHINIRASD 1306
>gi|297699078|ref|XP_002826621.1| PREDICTED: cadherin-3 isoform 2 [Pongo abelii]
Length = 774
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 52/90 (57%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+VA+Y+L + ATD+
Sbjct: 197 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVISSGLDREKVAEYTLTLQATDM 248
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+PVF + Y
Sbjct: 249 DGDGSTTTAVAVVEILDANDNAPVFDPQKY 278
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 26/156 (16%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DREE+A+Y L A G + + ++++ V D+ND+ P F+Q
Sbjct: 104 AVEKETGWLLLNKP-LDREEIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQ 162
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAV-----------PSN 161
+R V L+ L +S+ V+ATD D Y V P +
Sbjct: 163 DTFRGSV--LEGVLPG--------TSVMQVTATDEDDAIYTYNGVVAYSIHSQEPKDPHD 212
Query: 162 LVVIVPQ---TGELLLTGDPPSDDVEYELTVEAHDL 194
L+ + + T ++ +G EY LT++A D+
Sbjct: 213 LMFTIHRSTGTISVISSGLDREKVAEYTLTLQATDM 248
>gi|118341620|gb|AAI27610.1| Protocadherin beta 12 [Mus musculus]
Length = 789
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 111/254 (43%), Gaps = 47/254 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT D+ H +TV V D NDN+P F+Q Y V +
Sbjct: 395 LVTEGPLDRESRAEYNITITVWDLGTPRLTTQHTITVQVADINDNAPAFTQTSYTLFVQE 454
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVP-------SNLVVIVPQTGE 171
NS H IG++SATD+D + Y L P ++LV I G+
Sbjct: 455 ----NNSPALH------IGTISATDSDSGSNAHITYSLLPPHDSQLALASLVSINSDNGQ 504
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQMIDR 227
L + ++ +EL V+A D SP+ ++ +V + NSP + L M +
Sbjct: 505 LFALRAMDYEMLQAFELHVDATDGGSPALSSQALVRVVVLDDNDNSPFV----LYPM--Q 558
Query: 228 KSEAPHRIEKRRVTRAVRP----TKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENP 283
+ AP + RA P TK + G+ + F L K TE F +
Sbjct: 559 NASAPC---TELLPRAAEPGYLITKVVAVDRDSGQ-NAWLSFQLLKATEPGLFSV----- 609
Query: 284 WITVDENGDVRVKK 297
W NG+VR +
Sbjct: 610 WA---HNGEVRTTR 620
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 58/120 (48%), Gaps = 17/120 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + +L +TA D ++ T V ++V+D NDN+P F Q +Y V +
Sbjct: 187 LVLDRALDREEQPELTLTLTALDGGSPPRSGTTEVHIEVVDINDNAPQFIQSLYEVQVPE 246
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNL---VVIVPQTGELLLT 175
S LN+ V VSATD D VAY L L VI TGE+ LT
Sbjct: 247 -NSPLNALVVM---------VSATDLDAGIYGNVAYSLFQGDGLSQPFVIDKITGEIRLT 296
>gi|431912405|gb|ELK14539.1| Cadherin-3 [Pteropus alecto]
Length = 631
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
++ YSI H+ K+P H++ + +G + V S +DRE V +Y+L I ATD+
Sbjct: 54 VIAYSI------HSQEPKDP--HDLMFTVHRSTGTISVISSGLDRERVPEYTLTIQATDM 105
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G A T V V++LD NDN+PVF + Y
Sbjct: 106 DGDGSATTAVAMVEILDANDNAPVFDPQKY 135
>gi|348514361|ref|XP_003444709.1| PREDICTED: protocadherin alpha-1-like [Oreochromis niloticus]
Length = 593
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 92/196 (46%), Gaps = 39/196 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE+ + LV+TA D ++ T + V V+D NDNSPVFSQ +Y+
Sbjct: 182 LVLQKSLDREKKSVIHLVLTALDGGKPPRSGTLKIIVHVMDINDNSPVFSQTLYK----- 236
Query: 122 LKSSLNSNVSHWKKF-SSIGSVSATDAD---GDKVAYKLA-----VPSNLVVIVPQTGEL 172
+ VS +F +SI +VSATD D ++ Y P L I P TGE+
Sbjct: 237 ------AQVSENAQFQTSIVTVSATDLDEGINSEIVYSFIKRGNFKPEALFSINPGTGEI 290
Query: 173 LLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
+ G +V+YE A+D++ +R P+Q + L+++ID AP
Sbjct: 291 TVVG-----EVDYEENT-AYDIRIQARDKGAPSQST--------HGKLLVEVIDVNDNAP 336
Query: 233 HRIEKRRVTRAVRPTK 248
+ VT + P K
Sbjct: 337 ----EITVTSLMSPVK 348
>gi|402872875|ref|XP_003919499.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-8 [Papio anubis]
Length = 715
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 71/149 (47%), Gaps = 24/149 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVG 120
L+T +DRE A+Y++ IT TD+ G + TH+ + VL D NDN P FS+ Y V
Sbjct: 318 LLTEKPLDRESRAEYNVTITVTDL-GTPRLTTHLNMTVLVSDVNDNVPAFSEISYTLFVR 376
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P S+LV I G
Sbjct: 377 E----NNSPALH------IGSVSATDRDSSTNAQVTYSLLPPQDPHLPLSSLVSINADNG 426
Query: 171 ELLLTGDPPSDDV-EYELTVEAHDLQSPS 198
L + + E+E V A D SP+
Sbjct: 427 HLFALRSLDYEALQEFEFRVRAADRGSPA 455
>gi|397517996|ref|XP_003829186.1| PREDICTED: protocadherin beta-15 [Pan paniscus]
Length = 787
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ K + ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTEGALDRETRAEYNVTITITDLGTPRLKTQHNITVLVSDVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINTDNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 LFALRSLDYEALQAFEFHVGATDRGSPA 540
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVY 115
LV ++DREE A+ L +TA D ++ T + + VLD NDN+P F+Q +Y
Sbjct: 194 LVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFAQALY 247
>gi|395516289|ref|XP_003762323.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Sarcophilus harrisii]
Length = 3975
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 53/177 (29%), Positives = 79/177 (44%), Gaps = 30/177 (16%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINK 91
N N + +P + + +SG L+ TSG +DRE+ Y L + A+D G
Sbjct: 314 ANANIRYRFVDPPAAQAVFEIDPRSG-LITTSGRVDREQKENYELAVEASDQGGEPGPRS 372
Query: 92 AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK 151
A V + VLDENDN+P FS+K Y + + +V + + + V+ATD D D
Sbjct: 373 ATVRVHITVLDENDNAPQFSEKRYL-------AQVREDV---RPHTEVLRVTATDLDKDT 422
Query: 152 VAYKLAVPSNLV--------VIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
A V N++ I TGE+ + P D + EY L + A D P
Sbjct: 423 NAL---VHYNIISGNSRGHFAIDSLTGEIQVVA--PLDFEVEREYALRIRAQDSGRP 474
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 64/258 (24%), Positives = 102/258 (39%), Gaps = 40/258 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKV 114
++ SG L+ T+ +DRE + + +TA D A T V V V D ND++PVF Q
Sbjct: 229 DAASG-LISTAEPLDRESMDLHYFRVTALDHGSPRLSATTMVAVTVADRNDHAPVFEQAE 287
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP---SNLVVIVPQTGE 171
YR ++ NV + + A + Y+ P + I P++G
Sbjct: 288 YR-------ETIRENVEEGYPILQLRATDGDAAANANIRYRFVDPPAAQAVFEIDPRSGL 340
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSE 230
+ +G + E YEL VEA D EP S ++ + ++D
Sbjct: 341 ITTSGRVDREQKENYELAVEASD------QGGEPGP-----RSATVRVH--ITVLDENDN 387
Query: 231 APHRIEKR---RVTRAVRPTK---RIDFSETDGEMEGRIVFALEKETEREKFKIRDENPW 284
AP EKR +V VRP R+ ++ D + + + + R F I
Sbjct: 388 APQFSEKRYLAQVREDVRPHTEVLRVTATDLDKDTNALVHYNIISGNSRGHFAID----- 442
Query: 285 ITVDENGDVRVKKRWDFE 302
G+++V DFE
Sbjct: 443 ---SLTGEIQVVAPLDFE 457
Score = 45.1 bits (105), Expect = 0.046, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 62/138 (44%), Gaps = 17/138 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+ SG +DRE V Y + A D A VT+ V+D NDN P F+QK Y
Sbjct: 554 ITVSGPLDRESVEHYFFGVEALDHGSPPLSASASVTITVMDVNDNRPEFTQKEYHL---- 609
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKL--AVPSNLVVIVPQTGELLLTGDP 178
LN + + +S+ SV+A D D ++Y++ N I Q G L+T
Sbjct: 610 ---RLNEDAA---VGTSVLSVTAVDRDINSAISYQITGGNTRNRFAISTQGGMGLVTLAL 663
Query: 179 PSD---DVEYELTVEAHD 193
P D + Y+L V A D
Sbjct: 664 PLDYKQERYYKLIVTASD 681
Score = 44.3 bits (103), Expect = 0.076, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 82/179 (45%), Gaps = 30/179 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 924 ENSIVGSVVA--QITAIDPDEGPNAQIMYQIVEGNIPELFQM------------DIFSGE 969
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIV 119
L T D+D E +Y +V+ AT +++A H+ ++D+NDNSPV Q ++ V
Sbjct: 970 L-TTLIDLDYEMRPEYVIVVQATSAPLVSRATVHIR--LIDQNDNSPVLKNFQILFNNYV 1026
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
+ ++ S + IG + A D D D++ Y + L +++V QT GEL L+
Sbjct: 1027 SNRSNTFPSGI--------IGRIPAYDPDVSDRLFYTFERGNELELLVVNQTSGELRLS 1077
Score = 40.4 bits (93), Expect = 1.3, Method: Composition-based stats.
Identities = 58/219 (26%), Positives = 89/219 (40%), Gaps = 33/219 (15%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 827 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 874
Query: 73 EVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V Y L A D +G+ T ++ V V D NDN+PVF + + V + NS V
Sbjct: 875 SVPVYELTAYAVD-RGVPPLRTPVNIQVTVQDVNDNAPVFPAEEFEVRVKE-----NSIV 928
Query: 131 SHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQ---TGELLLTGDPPSD-DV 183
S + ++A D D ++ Y++ V N+ + +GEL D +
Sbjct: 929 G-----SVVAQITAIDPDEGPNAQIMYQI-VEGNIPELFQMDIFSGELTTLIDLDYEMRP 982
Query: 184 EYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
EY + V+A SR + NSPVL++ Q+L
Sbjct: 983 EYVIVVQATSAPLVSRATVHIRLIDQNDNSPVLKNFQIL 1021
Score = 39.3 bits (90), Expect = 2.2, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 70/170 (41%), Gaps = 21/170 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
+ ++D E+ Y+L ITA D KA+T +V + V D NDN+P F Y ++ +
Sbjct: 759 ITLQAELDYEDQVTYTLAITAKDNGIPQKADTTYVEIMVNDVNDNAPQFVASYYPGVISE 818
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN---LVVIVPQTGELLLT 175
F+S+ +SATD D +V Y + I P +G +
Sbjct: 819 ----------DAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTV 868
Query: 176 GDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQL 221
+ V YELT A D P QV +Q N+PV E+
Sbjct: 869 RRLDRESVPVYELTAYAVDRGVPPLRTPVNIQVTVQDVNDNAPVFPAEEF 918
Score = 38.9 bits (89), Expect = 3.3, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 25/181 (13%)
Query: 22 KHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVI 81
K + LV Y+I GN FA+ +S +G + V + +D E +Y+L I
Sbjct: 420 KDTNALVHYNIISGNSRGHFAI------------DSLTGEIQVVA-PLDFEVEREYALRI 466
Query: 82 TATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSI 139
A D ++ ++ V+D ND++P+F ++ V + + L +V H I
Sbjct: 467 RAQDSGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSVLE-NAPLGHSVIH------I 519
Query: 140 GSVSATDADGDKVAYKLAVPS--NLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQS 196
+V A + ++ YKL + V+ TG + ++G + VE Y VEA D S
Sbjct: 520 QAVDADHGENARLEYKLTGTALDTPFVVNSATGWITVSGPLDRESVEHYFFGVEALDHGS 579
Query: 197 P 197
P
Sbjct: 580 P 580
Score = 38.5 bits (88), Expect = 3.7, Method: Composition-based stats.
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 39/206 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ GT V + V + + + + Y IT GN + FA+ ST+ G
Sbjct: 613 EDAAVGTSV----LSVTAVDRDINSAISYQITGGNTRNRFAI----------STQGGMG- 657
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+ + +D ++ Y L++TA+D + H+ ++ D N + PVF Y V +
Sbjct: 658 LVTLALPLDYKQERYYKLIVTASDRTLHDNCYVHI--NITDANTHRPVFQSAHYSVSVNE 715
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQ------TGELLL 174
+ S++ +SATD D G+ + NL PQ +G + L
Sbjct: 716 DRPV----------GSTVVVISATDDDVGENARITYLLEDNL----PQFRIDVDSGAITL 761
Query: 175 TGDPPSDD-VEYELTVEAHDLQSPSR 199
+ +D V Y L + A D P +
Sbjct: 762 QAELDYEDQVTYTLAITAKDNGIPQK 787
>gi|390459329|ref|XP_003732277.1| PREDICTED: protocadherin beta-14-like [Callithrix jacchus]
Length = 798
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 82/179 (45%), Gaps = 32/179 (17%)
Query: 32 ITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN- 90
I DN F LK PT K+ +V+ +DRE A+Y++ IT TD+
Sbjct: 382 ICSIQDNLPFILK-PTF---------KNFFTIVSEKALDRESQAEYNITITVTDLGTPRL 431
Query: 91 KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD 150
K E ++TV V D NDN+P F+Q Y V + NS H IG+VSATD D
Sbjct: 432 KTEYNITVLVSDVNDNAPAFTQTSYILFVRE----NNSPALH------IGTVSATDRDSG 481
Query: 151 ---KVAYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
+V Y L P ++LV I P G L + ++ +E V A D SP+
Sbjct: 482 TNAQVTYSLLPPQDTHLPLASLVSINPDNGHLFALRSLDYEALQAFEFRVGATDRGSPA 540
>gi|47209332|emb|CAF93467.1| unnamed protein product [Tetraodon nigroviridis]
Length = 303
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 75/140 (53%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVT-VDVLDENDNSPVFSQKVYRFIVGD 121
LV ++DREE + L +TA D ++ T V V VLD NDN+PVFSQ +Y + +
Sbjct: 97 LVLDKELDREEQKEIKLKLTAVDGGSPQRSGTVVIHVTVLDANDNAPVFSQALYSATLSE 156
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPS----NLVVIVPQTGELLL 174
S +N+ V +VSATDAD +V Y+ + S N+ + TGE+ +
Sbjct: 157 -NSPINTPVI---------AVSATDADEGVNGEVTYEFSRISERSKNMFSLNQHTGEITV 206
Query: 175 TGDPPSDDVE-YELTVEAHD 193
TG+ +D + YE+ VEA D
Sbjct: 207 TGEIDYEDGQKYEIFVEAKD 226
>gi|47085727|ref|NP_998132.1| protocadherin Fat 1 precursor [Danio rerio]
gi|27463074|gb|AAO15696.1|AF469608_1 protocadherin [Danio rerio]
Length = 4610
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 119/277 (42%), Gaps = 52/277 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I GN N F + NP SGV+ VT +D E + Y L I T++
Sbjct: 1694 VFYQIKDGNVNGAFDI-NP-----------NSGVV-VTHSVLDYETIPSYKLTIQGTNMA 1740
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G+ + T + + + DENDN+PVF Q + +V + S +NS V K ++ + A D
Sbjct: 1741 GL-ASNTTLLIHLKDENDNAPVFIQDQFAGMVSE-SSPVNSVV--LTKDNTPLVIRALDT 1796
Query: 148 DGD---KVAYKLAVP--SNLVVIVPQTGELLLTGDPPSDDVEYE------LTVEAHDLQS 196
D D ++ Y++ P N I TG + +++YE +V+ HD+
Sbjct: 1797 DRDANSRLVYQIVEPFAHNYFAIDSSTGAIRTIS-----ELDYEQRSVFRFSVQVHDMGI 1851
Query: 197 PSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKR------I 250
P +A + A V ++++D P + T + PT + +
Sbjct: 1852 PRHFAEKAANV-------------TIEILDVNDCPPQFSQDLYETTVLVPTYKGVEVITV 1898
Query: 251 DFSETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
+ S+ D R+ +++ + EKFK+ IT+
Sbjct: 1899 NASDADSGPNSRLFYSIVEGNIGEKFKMDPVTGVITI 1935
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 15/92 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ K+G++ TS +DRE+ ++ L IT +D +
Sbjct: 1171 LSYKITSGNPQGFFSINQ------------KTGLVTTTSRKLDREQQDEHILEITVSD-Q 1217
Query: 88 GINKAET--HVTVDVLDENDNSPVFSQKVYRF 117
G+ T V V VLDENDNSP F +KVY+
Sbjct: 1218 GVPAKSTTVRVIVKVLDENDNSPQFMEKVYKI 1249
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
VR+SI GN F + +P E++ + +DRE+ + Y+L + A+D
Sbjct: 3368 VRFSIIDGNQGSPFTI-DPVRGEVK------------VARLLDREKTSGYTLTVLASDNG 3414
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
G ++ + + VDV D NDN P+FSQ Y I+
Sbjct: 3415 GPARSSSATINVDVSDINDNPPIFSQANYSIII 3447
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 80/171 (46%), Gaps = 20/171 (11%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT-DVKGINKA 92
Q N+ + + NP + R + SGVL T DREE + +V+ T D K + A
Sbjct: 2004 QVNEPLFYTILNP---DKRFTISRTSGVLSSTGTPFDREEQGVFDIVVEVTRDDKSPDAA 2060
Query: 93 ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---G 149
VTV V D NDN PVF Y+ + + ++++V H I V+A DAD
Sbjct: 2061 HVLVTVIVEDVNDNPPVFVNLPYQAL-----AQVDADVDHI-----ITKVTAVDADINEN 2110
Query: 150 DKVAYKLAVPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSPS 198
++ Y L N V + GE+ LT D S + E+ +TV A D P+
Sbjct: 2111 AEINYHLQ-ELNEFVQISTDGEISLTKKLDKDSVNTEFIITVVARDGGEPA 2160
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 112/265 (42%), Gaps = 47/265 (17%)
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D EE + L+I A D V ++ +E V +DV+D NDN+PVFSQ VY V +L
Sbjct: 2345 LDHEEKPSHRLLIRAVDGGVPALS-SEVMVLIDVMDLNDNTPVFSQNVYEATVSELAPR- 2402
Query: 127 NSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSN----LVVIVPQTGELLLTGD-PPS 180
H+ + V A+DAD D + ++ S + P TG L+++ P
Sbjct: 2403 ----GHF-----VTQVQASDADISDSGKLEFSILSGNEGQNFAMDPNTGALVISNHRKPH 2453
Query: 181 DDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVL-QDEQLLQMIDRKSEAPHRIEKRR 239
+ Y + V D S + + F++P Q + ++++ +E
Sbjct: 2454 MESLYNINVSVSDGVFRSSAIVKVNVISANFHNPTFNQVDYVVEL----------LENSP 2503
Query: 240 VTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
V V + D D GR+ + + + ++KF I ENG++ +
Sbjct: 2504 VGTLVAEAQATD---DDSGTYGRLTYHIVNDIAKDKFSIS---------ENGEI-----F 2546
Query: 300 DFEELGPEKTIDFWVTINNQATNGG 324
E L E ++ + I+ A +GG
Sbjct: 2547 TLESLDRENALEKVIPISLIAKDGG 2571
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 88/199 (44%), Gaps = 24/199 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V+ P+ + P +RY I G++ + F ++ + +R T+
Sbjct: 43 ENSAAKTYVES-PVKMGIYITDPTWEIRYKIVSGDNENLFKAEDYHLGDFSFLRIRTKGG 101
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
S +L +RE Y L + A + +A T V + VLD ND P+FS Y
Sbjct: 102 SSAIL------NREVRDHYILTVKAMEKNSNAEARTRVRIQVLDTNDLRPLFSPTAYSI- 154
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +S+ V ATDAD + Y +++ + P +G + LT
Sbjct: 155 ------SLPENTAIR---TSVAKVMATDADIGTNGEYYYSFREWTDMFSVHPTSGVVTLT 205
Query: 176 GD-PPSDDVEYELTVEAHD 193
G S+ +YEL + A D
Sbjct: 206 GKLDYSETKQYELEILAVD 224
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 49/230 (21%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
++V + K+P ++Y+ D + FA+ NP SG L+ T+ + + V
Sbjct: 385 VMVTAVPKYPQ--LKYAFRHRLDKNHFAI-NP-----------DSG-LITTAAPLHADSV 429
Query: 75 AQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWK 134
+Y L + +D K + K V +DV+D N+N P F Q Y K+SL+ N+
Sbjct: 430 NKYELEVVTSDKKAVTK----VIIDVIDVNNNGPEFKQTSY-------KASLDENMPTG- 477
Query: 135 KFSSIGSVSATDADGDK---VAYKLA-VPSNLVVIVPQTGELLLTGDPPSDDVEYELTVE 190
+S+ +V ATD D + V Y +A V S VI +G + S+ ++YEL
Sbjct: 478 --TSVLTVKATDLDSGENGYVTYSIANVNSQPFVIDYFSGVI-----SSSETLDYELMPR 530
Query: 191 AHDLQ-------SPSRYAREPAQVWLQFNSPVLQDEQ-LLQMIDRKSEAP 232
+ L+ SP R E QV + N+ L D + L + +D + P
Sbjct: 531 IYTLKVRASGWGSPYRREVE-TQVTIMLNN--LNDNKPLFENVDCDATVP 577
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+GV+ V +D E Y L + ATD KAE V + + D NDN PVF K+Y
Sbjct: 2230 TGVIQVVK-TLDFETHPAYKLSVRATDSLTGAKAEVFVDIILEDVNDNPPVFHTKLY--- 2285
Query: 119 VGDLKSSLNSNVSHWKKF-SSIGSVSATDAD 148
N+++S +S+ VSATDAD
Sbjct: 2286 --------NASLSEASVIGTSVLEVSATDAD 2308
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 24/142 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + Y+I GN+ F + +P T GV ++
Sbjct: 3244 GTQVLRVHAASRDTEAGTEITYAIINGNERGAFRV-DPQT----------GGVFVIEP-- 3290
Query: 69 IDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+D E ++ L + ATD + ++ V +++ D NDNSPVF+Q +Y ++ + + L
Sbjct: 3291 LDYETAHEFYLTVEATDGGTPSLSDLATVNINLTDVNDNSPVFNQDIYSAVISE-DAELG 3349
Query: 128 SNVSHWKKFSSIGSVSATDADG 149
V +V A DADG
Sbjct: 3350 KTVL---------TVMADDADG 3362
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 15/88 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V + IT GN + F + SG ++V +D E+ + Y+L + ATD
Sbjct: 1386 VWFEITGGNSDSRFEVGK------------ASGTMIVAQA-LDAEQKSHYNLTVNATD-- 1430
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVY 115
G T V + V+D N++ P FS+ Y
Sbjct: 1431 GTRSVSTQVLIKVIDTNNHRPQFSKPKY 1458
>gi|82659759|gb|ABB88946.1| Fat4 [Mus musculus]
Length = 4981
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 72/153 (47%), Gaps = 28/153 (18%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ V+YSI+ G+ + R +KSGV+ T +DREE Y L + A
Sbjct: 720 PNGTVKYSISAGDRS-------------RFQIHAKSGVI-STKMALDREEKTAYQLQVVA 765
Query: 84 TDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
TD + + VTV VLD DN PVFSQ Y F+V + NV+ +GSV
Sbjct: 766 TDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAYSFVVFE-------NVALGYH---VGSV 815
Query: 143 SATDAD-GDKVAYKLAVPS--NLVVIVPQTGEL 172
SAT D ++Y + + + P TG+L
Sbjct: 816 SATTMDLNANISYLITTGDQRGMFAMNPVTGQL 848
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 76/174 (43%), Gaps = 29/174 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ NP T + L T+ IDREE + Y L I A+
Sbjct: 826 ISYLITTGDQRGMFAM-NPVTGQ------------LTTASVIDREEQSFYQLKIVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V D NDN+P F Q V S+N+ V +W+ SI A D
Sbjct: 871 GAVTGDTVVNITVKDLNDNAPHFLQAV---------ESINA-VENWQAGHSIFQAKAVDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSP 197
D +V Y L P NL I Q G + L G Y++ + A D+ P
Sbjct: 921 DEGVNGRVLYSLKQNPKNLFTINEQNGNISLLGALDVHAGSYQVEIVASDMGVP 974
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 84/185 (45%), Gaps = 40/185 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+ YSI +GN+ FA+ +S SG V LV G +D E + YSL+I A D
Sbjct: 1244 LIHYSILKGNEERQFAI------------DSFSGQVTLV--GKLDYEATSAYSLLIQAVD 1289
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
I T +++D+LDENDN+P F KS+L +V + + SV+
Sbjct: 1290 SGAIPLNSTCTLSIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVT 1338
Query: 144 ATDADGDKVA---YKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
ATD+D A Y + +N I P TG + L D E Y+L + A D
Sbjct: 1339 ATDSDSGVNADLHYTITGSNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQ 1395
Query: 195 QSPSR 199
P R
Sbjct: 1396 GRPPR 1400
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ YSL + ATD KG + T V V VLD NDN+PVF+Q +YR
Sbjct: 2109 TGELDREEVSNYSLTVVATD-KGQPPLSSSTEVVVMVLDINDNNPVFAQAMYR 2160
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 31/176 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN +F + N T EIR+ +DRE+++ Y L + +
Sbjct: 2701 PNGQLDYEIVNGNQESSFTI-NHATGEIRSIRP------------LDREKISHYELTVKS 2747
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D KG T V V +LDENDN+P FSQ ++ S NS + + ++
Sbjct: 2748 SD-KGSPSQSTSVKVIISILDENDNAPRFSQIFSAYV------SENSPLGY-----TVTR 2795
Query: 142 VSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ +D D A Y + S I P TG+++++ +D + Y + V AHD
Sbjct: 2796 VTTSDEDIGINAISRYSIVDTSLPFTINPNTGDIVISRPLNREDTDRYRIRVSAHD 2851
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 88/207 (42%), Gaps = 45/207 (21%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN+ F L N + + + LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIVSGNEAGRFRLD-----ITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KGE 227
Query: 90 NKAETH--VTVDVLDENDNSPVFSQKVYR------FIVGDLKSSLNSNVSHWKKFSSIGS 141
K + V V V D NDN PVF Y+ +VG SS+
Sbjct: 228 PKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVG----------------SSVLQ 271
Query: 142 VSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQ 195
V+A DAD + Y+L + P+TG L+T P D +Y LTV+A D
Sbjct: 272 VAAADADEGTNADIRYRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTVQATDRG 329
Query: 196 SPSRYAREPAQVWLQF-----NSPVLQ 217
PS R A+ ++Q N PV++
Sbjct: 330 VPSLTGR--AEAFIQLLDVNDNDPVVK 354
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y++ G D+ +F + + +SG L+ T
Sbjct: 1754 GDGSKIMQLTAMDADEGANALVTYALISGADD-SFRI------------DPESGDLIATK 1800
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + + D ND++P FS+ VY F
Sbjct: 1801 -RLDREHRSKYSLLVRADD--GLQSSDMRINITISDVNDHTPRFSRPVYSF 1848
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVF 110
L T+ +DREE A Y L I ATD+ ++ T V V +LD NDNSPVF
Sbjct: 641 LSTASSLDREEQAFYCLSILATDLGSPPQSSTAQVNVSLLDINDNSPVF 689
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 35/177 (19%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+ Y+I GN+ FA+ S +GV+ + +D E +++ + I+ATD
Sbjct: 3125 LISYNIISGNEEGIFAIN------------SSTGVVTLAKA-LDYEMSSKHEMTISATDG 3171
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + +TV V+D NDNSPVF + V + S + V H ++AT
Sbjct: 3172 GWVARTGYCSLTVSVIDVNDNSPVFVPDEFFPTVMENAPS-GTTVIH---------LNAT 3221
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
DAD +AY + + S+L VI P G + G D E Y LTV+A ++
Sbjct: 3222 DADSGANAVIAYTVQSSDSDLFVIDPNMGVITTQG---FLDFETKQSYHLTVKAFNV 3275
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 76/172 (44%), Gaps = 34/172 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+ SG +DRE+ + SL + A + ++G + E V + VLD ND PVFS YR +
Sbjct: 3357 IYVSGLLDREKEERVSLKVLAKNFGNIRGADIDEVTVNITVLDAND-PPVFSLSTYRVQI 3415
Query: 120 GD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLVVIVPQ 168
+ S+ +S+ + W +FS IGS + A I PQ
Sbjct: 3416 SEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGA---------------FSINPQ 3460
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
TG++ +T + + Y LTV A D +PS V L+ N PVL
Sbjct: 3461 TGQITVTSGLDRESLPVYNLTVLAVDSGTPSATGSASLVVTLEDINDNGPVL 3512
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 83/207 (40%), Gaps = 27/207 (13%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYSI GN F + +E V +G +DRE +Q L I+A D +
Sbjct: 510 LRYSIVSGNGLGWFHI-----------SEHSGLVTTSAAGGLDRELASQIVLNISARD-Q 557
Query: 88 GINKAETH--VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G++ ++ + V VLD ND PVFSQ + S+ N + +G+
Sbjct: 558 GVHPKVSYAQLVVTVLDVNDEKPVFSQP------EGYEVSVVENAPTGTELLVLGATDRD 611
Query: 146 DADGDKVAYKLAVPSN---LVVIVPQTGELLLTGDPPSDD-VEYELTVEAHDLQSPSRYA 201
D V + L N L + P +G L ++ Y L++ A DL SP + +
Sbjct: 612 LGDNGTVRFSLQEAENDQRLFRLDPVSGRLSTASSLDREEQAFYCLSILATDLGSPPQSS 671
Query: 202 REPAQVWL---QFNSPVLQDEQLLQMI 225
V L NSPV Q I
Sbjct: 672 TAQVNVSLLDINDNSPVFYPVQYFAHI 698
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 27/123 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y+IT GN+ F + G L + S ++DRE +Y L++ A+D +
Sbjct: 1031 IAYTITDGNNGDAFGIF-------------PDGQLYIKS-ELDRELQDRYVLLVVASD-R 1075
Query: 88 GINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ V V VL D NDN P+F+ Y F + + S +G VSA
Sbjct: 1076 AVEPLSATVNVTVLLEDVNDNRPLFNSTNYTFYFEE----------EQRAGSFVGKVSAV 1125
Query: 146 DAD 148
D D
Sbjct: 1126 DKD 1128
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE 93
QG N+ P T+ ST +GVL T+ +IDRE++A + L + D +
Sbjct: 3543 QGPFNYYLLSTGPATNYFSLST---AGVL-STTREIDREQIADFYLSVVTRDSGAPQMSS 3598
Query: 94 TH-VTVDVLDENDNSPVFSQKVYRFI--VGDLKSSLNSNVSHWKKFSSIGSVSATDADG- 149
T V + VLD+NDN P S+ V F+ G+L ++GSV D D
Sbjct: 3599 TGTVHITVLDQNDN-PSQSRTVEIFVNYYGNLFPG-----------GTLGSVKPQDPDVL 3646
Query: 150 DKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHD 193
D L + +P G L+ P S D ++LTV + D
Sbjct: 3647 DSFHCSLTSGVTSLFSIP-AGSCDLSSQPRSTDGTFDLTVVSSD 3689
>gi|417407147|gb|JAA50198.1| Putative cadherin egf lag seven-pass g-type receptor [Desmodus
rotundus]
Length = 4593
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 93/206 (45%), Gaps = 25/206 (12%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G+ V H V Y I GN F + NP + I +T +D
Sbjct: 1679 GIGSFVGMVTAHSQSSVVYEIKDGNVADAFDI-NPHSGSI------------ITQKALDF 1725
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E + Y+L + T++ G++ T V V + DENDN+PVF+Q Y + + +S+NS V
Sbjct: 1726 EALPVYTLTVQGTNMAGLSTNST-VLVHLQDENDNAPVFTQAEYTGRISE-SASINSVVL 1783
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVE 184
K + + ATDAD + + Y + PS I TG + +L+ D +
Sbjct: 1784 TDKNVPLV--IRATDADRESNALLVYHIVEPSVHKYFAIDSSTGAIHTVLSLD-YEETST 1840
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQ 210
+ TV+ HD+ +P +A+ A V +
Sbjct: 1841 FHFTVQVHDMGTPRLFAKYAANVTIH 1866
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 104/248 (41%), Gaps = 51/248 (20%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + YSI GN++ F++ +P T + L+ S
Sbjct: 3244 GTEVLQVYAASRDIEANAEITYSIISGNEHGKFSI-DPRT----------GAIFLIES-- 3290
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L + ATD ++ T V V+V D NDN+PVFSQ Y ++ + + L
Sbjct: 3291 LDYESSHEYYLTVEATDGGTPSLSDVAT-VNVNVTDINDNTPVFSQDPYTAVISE-DAVL 3348
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
V +V A DADG + Y + + I P GE+ +T +
Sbjct: 3349 EQPVI---------TVMADDADGPLNSHIHYSIIDGNQGSPFTIDPARGEVKVTKLLDRE 3399
Query: 182 DVE-YELTVEAHDLQSPSR-------------------YAREPAQVWLQFNSPVLQDEQL 221
+ Y LTV+A D SP R ++RE V +Q N PV
Sbjct: 3400 TISGYTLTVQASDNGSPPRANTTTVNIDVSDVNDNAPVFSRENYSVIIQENKPVGFSVLQ 3459
Query: 222 LQMIDRKS 229
L + DR S
Sbjct: 3460 LLVTDRDS 3467
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 81/181 (44%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V P+ + +P +RY I G+ + F + + +R T+
Sbjct: 43 ENSAAKTYVSH-PVKMGIYITNPSWELRYKIVSGDSENLFKAEEYLLGDFCFLRIRTKGG 101
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A T V V VLD ND P+FS Y
Sbjct: 102 NTAIL------NREVKDHYTLIVKALEKNSNAEARTVVRVQVLDTNDLRPLFSPTSYSV- 154
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 155 ------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGTIVLT 205
Query: 176 G 176
G
Sbjct: 206 G 206
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 80/171 (46%), Gaps = 32/171 (18%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GN++ F + + +G+L + S +DRE +Y+L IT +D+
Sbjct: 752 YAISGGNEDSCFLI------------DMDTGMLKILS-PLDRETTDKYTLNITVSDLGIP 798
Query: 90 NKAETHV-TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVSATDA 147
KA H+ V VLD NDN P F Q+ Y F+ VS K+ +S I V ATD
Sbjct: 799 QKAAWHLLAVRVLDANDNPPEFFQESY-FV----------EVSEDKEVNSEIIQVEATDR 847
Query: 148 D---GDKVAYKLAVPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEAHD 193
D +V Y L ++ I TG + + DP V Y L VEA D
Sbjct: 848 DLGPNGQVTYSLLTDTDTFSIDSVTGVVTVVRPLDPEVQHVHY-LKVEARD 897
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y IT GN F++ ++G++ TS +DRE+ ++ L +T TD
Sbjct: 1174 YKITSGNPQGFFSI------------HPRTGLITTTSRRLDREQQDEHILEVTVTDNGSP 1221
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRF 117
++ V V +LDENDN P F QK Y+
Sbjct: 1222 PRSTVARVIVKILDENDNKPQFLQKFYKI 1250
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 105/251 (41%), Gaps = 38/251 (15%)
Query: 50 EIRNSTESKSGV----------LLVTSGDIDREEVAQYSLVITATDVKGINKAETHV--T 97
EIR S SGV ++ TS +DRE Y L + ATD +G+ + V
Sbjct: 1066 EIRYSIRDGSGVGVFKIDEETGVIETSDRLDRESAPHYWLTVYATD-QGVVPLSSFVEIY 1124
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAY 154
V+V D NDN+P S+ VY V + + K S+ + A D D DK+ Y
Sbjct: 1125 VEVEDVNDNAPRTSEPVYYPEV----------MENSPKDVSVVQIDALDPDSSSSDKLTY 1174
Query: 155 KLAV--PSNLVVIVPQTGELLLTG---DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL 209
K+ P I P+TG + T D D E+ L V D SP R A+V +
Sbjct: 1175 KITSGNPQGFFSIHPRTGLITTTSRRLDREQQD-EHILEVTVTDNGSPPRSTV--ARVIV 1231
Query: 210 QFNSPVLQDEQLLQMIDRKSEAPHR--IEKRRVTRAVRPTKRIDFSETDGEMEGRIVFAL 267
+ Q LQ K P R E+ R T+ P R+ ++ D I +++
Sbjct: 1232 KILDENDNKPQFLQKF-YKIRLPEREKPERERTTKR-EPIYRVIATDKDEGPNAEISYSI 1289
Query: 268 EKETEREKFKI 278
E+ E +F I
Sbjct: 1290 EEGNEHGRFFI 1300
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 76/175 (43%), Gaps = 36/175 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N +S+ V + +DRE Y L +TATD
Sbjct: 2952 VTYYITGGDPLGQFAVEN---------VQSEWKVYV--KEPLDRERQDSYLLTVTATD-- 2998
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS--IGSVSAT 145
G ++ V V VLD NDNSPV + +Y S+ F I VSAT
Sbjct: 2999 GTFASKAIVEVKVLDANDNSPVCEKTLY------------SDTIPEDAFPGKLIMQVSAT 3046
Query: 146 DAD---GDKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHD 193
DAD ++ Y L P + + P TGEL P D E Y L V+A D
Sbjct: 3047 DADIRSNAEITYTLFGPGAEKFKLNPDTGELKTLA--PLDREEQAVYHLVVKATD 3099
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 108/272 (39%), Gaps = 49/272 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L T +DREE A Y LV+ ATD G +A +T+D D NDN+P FS Y V
Sbjct: 3077 LKTLAPLDREEQAVYHLVVKATDGGGRFCQANIVLTLD--DVNDNAPEFSADPYTMTV-- 3132
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVIVPQTGELLLTGDP 178
+ + + + V ATD D K+ Y L ++ + ++ ++ P
Sbjct: 3133 --------FENTEPGTLLTRVQATDPDAGLNRKIVYSLPDSADGQFSISESSGIIQLEKP 3184
Query: 179 PSDDVE--YELTVEAHDLQSPSRYAREPAQVW----LQFNSPVLQDEQLLQMIDRKSEAP 232
+++ Y LT++A D P R V + N PV + + + +
Sbjct: 3185 LDRELQAVYTLTLKATDQGLPRRLTATSTVVVSVLDINDNPPVFEYREYSASVSEDTLI- 3243
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGD 292
E +V A R D E I +++ E KF I D
Sbjct: 3244 -GTEVLQVYAASR----------DIEANAEITYSIISGNEHGKFSI-------------D 3279
Query: 293 VRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
R + E L E + ++++T+ +AT+GG
Sbjct: 3280 PRTGAIFLIESLDYESSHEYYLTV--EATDGG 3309
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E+V Q+ + + A D G+ ++ VTVDV D NDN P+F Q++Y ++ +
Sbjct: 2346 LDYEQVHQHKIFVRAID-GGMPPLSSDVIVTVDVTDLNDNPPLFDQQIY-------EARI 2397
Query: 127 NSNVSHWKKFSSIGSVSATDADGDKVAYKL 156
+ + H + + + A +D DK+ Y +
Sbjct: 2398 SEHAMHGHFVTCVKAYDADSSDVDKLEYSI 2427
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 14/94 (14%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+ R++ +Q+ L +T +D KA T V V VL N N+P F+Q Y K+S +
Sbjct: 424 VKRQQASQFELEVTTSD----RKASTRVLVKVLSANSNAPEFTQTAY-------KASFDE 472
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNL 162
NV +++ SVSA D D + Y +NL
Sbjct: 473 NVPIG---TTVMSVSAADPDEGENGYVTYSIANL 503
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 49 HEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSP 108
++ R + +G ++V + +D E+ + Y+L + ATD G N T V + V+D ND+ P
Sbjct: 1396 YDSRFDVDKGTGTIIV-AKPLDAEQRSNYNLTVEATD--GTNTIHTQVFIKVIDTNDHRP 1452
Query: 109 VFSQKVYRFIV 119
FS Y ++
Sbjct: 1453 QFSTSKYEVVI 1463
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 14/136 (10%)
Query: 69 IDREEVAQYSLVITATDVKGINK---AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+DRE A Y+L + ATD +G+ + A + V V VLD NDN PVF + Y +S
Sbjct: 3185 LDRELQAVYTLTLKATD-QGLPRRLTATSTVVVSVLDINDNPPVFEYREY-------SAS 3236
Query: 126 LNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPS--NLVVIVPQTGELLLTGDPPSDDV 183
++ + + + + S ++ Y + + I P+TG + L +
Sbjct: 3237 VSEDTLIGTEVLQVYAASRDIEANAEITYSIISGNEHGKFSIDPRTGAIFLIESLDYESS 3296
Query: 184 -EYELTVEAHDLQSPS 198
EY LTVEA D +PS
Sbjct: 3297 HEYYLTVEATDGGTPS 3312
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYR 116
SGVL T DRE+ + +V+ T + A +HV V V+ D+NDN+PVF Y
Sbjct: 2027 SGVLSTTGIPFDREQQEAFDVVVEVTQ-EHKPAAVSHVLVKVIIEDQNDNAPVFVNLPYY 2085
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELL 173
+V +++ V H I V+A D D K V Y L I P +GE+
Sbjct: 2086 AVV-----KVDAAVGHI-----IRHVTAVDRDSGKNGEVHYYLKEHHEHFEIGP-SGEIS 2134
Query: 174 LTG--DPPSDDVEYELTVEAHDLQSPSRYA 201
L +P + + +Y +TV A D +P+ A
Sbjct: 2135 LKKQFEPDTLNKQYLVTVVAKDGGNPAFSA 2164
>gi|153792706|ref|NP_899044.3| protocadherin Fat 4 precursor [Mus musculus]
gi|341940688|sp|Q2PZL6.2|FAT4_MOUSE RecName: Full=Protocadherin Fat 4; AltName: Full=FAT tumor
suppressor homolog 4; AltName: Full=Fat-like cadherin
protein FAT-J; Flags: Precursor
Length = 4981
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 72/153 (47%), Gaps = 28/153 (18%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ V+YSI+ G+ + R +KSGV+ T +DREE Y L + A
Sbjct: 720 PNGTVKYSISAGDRS-------------RFQIHAKSGVI-STKMALDREEKTAYQLQVVA 765
Query: 84 TDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
TD + + VTV VLD DN PVFSQ Y F+V + NV+ +GSV
Sbjct: 766 TDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAYSFVVFE-------NVALGYH---VGSV 815
Query: 143 SATDAD-GDKVAYKLAVPS--NLVVIVPQTGEL 172
SAT D ++Y + + + P TG+L
Sbjct: 816 SATTMDLNANISYLITTGDQRGMFAMNPVTGQL 848
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 76/174 (43%), Gaps = 29/174 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ NP T + L T+ IDREE + Y L I A+
Sbjct: 826 ISYLITTGDQRGMFAM-NPVTGQ------------LTTASVIDREEQSFYQLKIVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V D NDN+P F Q V S+N+ V +W+ SI A D
Sbjct: 871 GAVTGDTVVNITVKDLNDNAPHFLQAV---------ESINA-VENWQAGHSIFQAKAVDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSP 197
D +V Y L P NL I Q G + L G Y++ + A D+ P
Sbjct: 921 DEGVNGRVLYSLKQNPKNLFTINEQNGNISLLGALDVHAGSYQVEIVASDMGVP 974
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 84/185 (45%), Gaps = 40/185 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+ YSI +GN+ FA+ +S SG V LV G +D E + YSL+I A D
Sbjct: 1244 LIHYSILKGNEERQFAI------------DSFSGQVTLV--GKLDYEATSAYSLLIQAVD 1289
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
I T +++D+LDENDN+P F KS+L +V + + SV+
Sbjct: 1290 SGAIPLNSTCTLSIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVT 1338
Query: 144 ATDADGDKVA---YKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
ATD+D A Y + +N I P TG + L D E Y+L + A D
Sbjct: 1339 ATDSDSGVNADLHYTITGSNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQ 1395
Query: 195 QSPSR 199
P R
Sbjct: 1396 GRPPR 1400
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ YSL + ATD KG + T V V VLD NDN+PVF+Q +YR
Sbjct: 2109 TGELDREEVSNYSLTVVATD-KGQPPLSSSTEVVVMVLDINDNNPVFAQAMYR 2160
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 31/176 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN +F + N T EIR+ +DRE+++ Y L + +
Sbjct: 2701 PNGQLDYEIVNGNQESSFTI-NHATGEIRSIRP------------LDREKISHYELTVKS 2747
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D KG T V V +LDENDN+P FSQ ++ S NS + + ++
Sbjct: 2748 SD-KGSPSQSTSVKVIISILDENDNAPRFSQIFSAYV------SENSPLGY-----TVTR 2795
Query: 142 VSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ +D D A Y + S I P TG+++++ +D + Y + V AHD
Sbjct: 2796 VTTSDEDIGINAISRYSIVDTSLPFTINPNTGDIVISRPLNREDTDRYRIRVSAHD 2851
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 88/207 (42%), Gaps = 45/207 (21%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN+ F L N + + + LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIVSGNEAGRFRLD-----ITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KGE 227
Query: 90 NKAETH--VTVDVLDENDNSPVFSQKVYR------FIVGDLKSSLNSNVSHWKKFSSIGS 141
K + V V V D NDN PVF Y+ +VG SS+
Sbjct: 228 PKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVG----------------SSVLQ 271
Query: 142 VSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQ 195
V+A DAD + Y+L + P+TG L+T P D +Y LTV+A D
Sbjct: 272 VAAADADEGTNADIRYRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTVQATDRG 329
Query: 196 SPSRYAREPAQVWLQF-----NSPVLQ 217
PS R A+ ++Q N PV++
Sbjct: 330 VPSLTGR--AEAFIQLLDVNDNDPVVK 354
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y++ G D+ +F + + +SG L+ T
Sbjct: 1754 GDGSKIMQLTAMDADEGANALVTYALISGADD-SFRI------------DPESGDLIATK 1800
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + + D ND++P FS+ VY F
Sbjct: 1801 -RLDREHRSKYSLLVRADD--GLQSSDMRINITISDVNDHTPRFSRPVYSF 1848
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVF 110
L T+ +DREE A Y L I ATD+ ++ T V V +LD NDNSPVF
Sbjct: 641 LSTASSLDREEQAFYCLSILATDLGSPPQSSTAQVNVSLLDINDNSPVF 689
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 82/177 (46%), Gaps = 35/177 (19%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+ Y+I GN+ FA+ S +GV+ + +D E +++ + I+ATD
Sbjct: 3125 LISYNIISGNEEGIFAIN------------SSTGVVTLAKA-LDYEMSSKHEMTISATDG 3171
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + +TV V+D NDNSPVF + V + S + V H ++AT
Sbjct: 3172 GWVARTGYCSLTVSVIDVNDNSPVFVPDEFFPTVMENAPS-GTTVIH---------LNAT 3221
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
DAD +AY + + S+L VI P G + G D E Y LTV+A ++
Sbjct: 3222 DADSGANAVIAYTVQSSDSDLFVIDPNMGVITTQG---FLDFETKQSYHLTVKAFNV 3275
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 76/172 (44%), Gaps = 34/172 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+ SG +DRE+ + SL + A + ++G + E V + VLD ND PVFS YR +
Sbjct: 3357 IYVSGLLDREKEERVSLKVLAKNFGNIRGADIDEVTVNITVLDAND-PPVFSLSTYRVQI 3415
Query: 120 GD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLVVIVPQ 168
+ S+ +S+ + W +FS IGS + A I PQ
Sbjct: 3416 SEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGA---------------FSINPQ 3460
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
TG++ +T + + Y LTV A D +PS V L+ N PVL
Sbjct: 3461 TGQITVTSGLDRESLPVYNLTVLAVDSGTPSATGSASLVVTLEDINDNGPVL 3512
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 83/207 (40%), Gaps = 27/207 (13%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYSI GN F + +E V +G +DRE +Q L I+A D +
Sbjct: 510 LRYSIVSGNGLGWFHI-----------SEHSGLVTTSAAGGLDRELASQIVLNISARD-Q 557
Query: 88 GINKAETH--VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G++ ++ + V VLD ND PVFSQ + S+ N + +G+
Sbjct: 558 GVHPKVSYAQLVVTVLDVNDEKPVFSQP------EGYEVSVVENAPTGTELLVLGATDRD 611
Query: 146 DADGDKVAYKLAVPSN---LVVIVPQTGELLLTGDPPSDD-VEYELTVEAHDLQSPSRYA 201
D V + L N L + P +G L ++ Y L++ A DL SP + +
Sbjct: 612 LGDNGTVRFSLQEAENDQRLFRLDPVSGRLSTASSLDREEQAFYCLSILATDLGSPPQSS 671
Query: 202 REPAQVWL---QFNSPVLQDEQLLQMI 225
V L NSPV Q I
Sbjct: 672 TAQVNVSLLDINDNSPVFYPVQYFAHI 698
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 27/123 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y+IT GN+ F + G L + S ++DRE +Y L++ A+D +
Sbjct: 1031 IAYTITDGNNGDAFGIF-------------PDGQLYIKS-ELDRELQDRYVLLVVASD-R 1075
Query: 88 GINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ V V VL D NDN P+F+ Y F + + S +G VSA
Sbjct: 1076 AVEPLSATVNVTVLLEDVNDNRPLFNSTNYTFYFEE----------EQRAGSFVGKVSAV 1125
Query: 146 DAD 148
D D
Sbjct: 1126 DKD 1128
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE 93
QG N+ P T+ ST +GVL T+ +IDRE++A + L + D +
Sbjct: 3543 QGPFNYYLLSTGPATNYFSLST---AGVL-STTREIDREQIADFYLSVVTRDSGAPQMSS 3598
Query: 94 TH-VTVDVLDENDNSPVFSQKVYRFI--VGDLKSSLNSNVSHWKKFSSIGSVSATDADG- 149
T V + VLD+NDN P S+ V F+ G+L ++GSV D D
Sbjct: 3599 TGTVHITVLDQNDN-PSQSRTVEIFVNYYGNLFPG-----------GTLGSVKPQDPDVL 3646
Query: 150 DKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHD 193
D L + +P G L+ P S D ++LTV + D
Sbjct: 3647 DSFHCSLTSGVTSLFSIP-AGSCDLSSQPRSTDGTFDLTVVSSD 3689
>gi|326928556|ref|XP_003210443.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Meleagris
gallopavo]
Length = 4281
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 37/217 (17%)
Query: 6 SGTGVKGLPIL-VASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLV 64
S + G P++ V++S P V Y I GN + F++ +SG L+
Sbjct: 1677 SESAAVGSPLIQVSASSLSP---VSYEIKDGNGDGVFSMN------------YQSG-LIS 1720
Query: 65 TSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
T +D E+V+ Y L + T++ G +T V + V+DENDN P+F + + +G +
Sbjct: 1721 TQKSLDFEQVSFYQLKVRGTNMAGA-FMDTMVLIYVIDENDNVPIFVKPAF---IGWIME 1776
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVPQTGELLLTGDPP 179
+ + ++ ATDAD D + Y++ P L + P TG L
Sbjct: 1777 NAPPQSMVLDESNAPLVTHATDADQDSNALLVYEILEPEALKYFTVDPSTGTLTSRA--- 1833
Query: 180 SDDVEYELT------VEAHDLQSPSRYAREPAQVWLQ 210
D++YELT V A D +PS +A +PA+V +
Sbjct: 1834 --DIDYELTPVFHFSVHARDSGNPSLFASKPAKVTIH 1868
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 22/155 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+RY I G+ + F + + +R T S + LL +RE Y L+I AT
Sbjct: 72 IRYRIASGDSSGLFKTEEHVIGDFCFLRIRTRSSNTALL------NREVKDSYMLIIKAT 125
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+ +A V + +LD ND P+FS Y+ + + + L + VS ++SA
Sbjct: 126 ENTFAYEAWAKVLIHILDRNDLKPLFSPPSYKVSIRE-DTPLKTVVS---------TLSA 175
Query: 145 TDADGDKVA---YKLAVPSNLVVIVPQTGELLLTG 176
TDAD + A Y L S+L I P TG ++ TG
Sbjct: 176 TDADAGQNAEFYYALNTKSDLFTIHPTTGAVVTTG 210
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
ST+ K+GVL VT G +D E ++S + ATD + +E V V+V D NDN PVFS+
Sbjct: 2224 STDFKTGVLTVT-GQLDYEIETKHSFTVRATDTALGSFSEARVEVEVEDINDNPPVFSEI 2282
Query: 114 VY 115
+Y
Sbjct: 2283 IY 2284
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 70/151 (46%), Gaps = 27/151 (17%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I+ GN + F + + + G+L V S +D E + Y L IT D+
Sbjct: 754 YVISDGNVDSCFTI------------DLELGLLQVLS-PLDHERTSFYILNITVYDLGTP 800
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K+ + V+VLD NDN+P F Q Y + + NV+ ++I + A DAD
Sbjct: 801 QKSSWKLLAVNVLDTNDNTPRFPQGAYWVTIPE-------NVATG---TTIAQLKAEDAD 850
Query: 149 GD---KVAYKLAVPSNLVVIVPQTGELLLTG 176
D +V Y L P++ I TGE+ +TG
Sbjct: 851 TDDNGRVKYSLLTPTDKFAINGVTGEVTVTG 881
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 30/181 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
++Y I GND+ F L S +G L + +G +D E +Y L I T
Sbjct: 3260 IKYEIVNGNDHGKFQLN------------SNTGALYI-NGSLDFEASHEYYLSIEGTRKG 3306
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+ ++ T V +++ D ND++P F Q Y D++ ++ V I +VSA D
Sbjct: 3307 SASLSDVTMVVINITDINDHAPEFIQDPY---FADIRE--DAAVGEI-----ILTVSADD 3356
Query: 147 ADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPSRY 200
DG +++ Y + P I P++G++ + +++ Y LTV A D P+++
Sbjct: 3357 LDGTMNNQITYSIVEGNPQGHFAIQPKSGQISIAKHLDREEISSYSLTVRATDNGHPAQF 3416
Query: 201 A 201
+
Sbjct: 3417 S 3417
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI +GN FA+ + KSG + + + +DREE++ YSL + ATD
Sbjct: 3365 ITYSIVEGNPQGHFAI------------QPKSGQISI-AKHLDREEISSYSLTVRATDNG 3411
Query: 88 GINK-AETHVTVDVLDENDNSPVFSQKVYRFIV 119
+ ++ V V V D NDN P F Q Y +V
Sbjct: 3412 HPAQFSDVAVRVHVSDVNDNPPRFFQLNYSVVV 3444
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 76/182 (41%), Gaps = 23/182 (12%)
Query: 25 HQLVRYSITQ----GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLV 80
H +++ S T N T++L P E R + L TS +DRE+ Y LV
Sbjct: 3035 HFILKISATDPDVGSNAQITYSLHXPGAEEFRLGAHTGE---LTTSAPLDREQKPTYHLV 3091
Query: 81 ITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG 140
ATD G + + + + D NDN+P RF ++ N + + I
Sbjct: 3092 AKATDGGG-RSCQADIMLTIEDTNDNAP-------RFFPSHCAVAVFDNTT---TKTPIA 3140
Query: 141 SVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDD--VEYELTVEAHDLQ 195
VSA D D +V Y L+ +N + +T ++ P D +ELTV A D
Sbjct: 3141 VVSARDLDEGLNAEVVYSLSDSANGHFSIEETTGVIRLEKPLKDSQHSAFELTVCATDQG 3200
Query: 196 SP 197
+P
Sbjct: 3201 TP 3202
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 57/150 (38%), Gaps = 32/150 (21%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
MENS T V L L S + + I GN F + T G
Sbjct: 1149 MENSPPNTSVLQLDALDPDSSSEGK--LTFHILTGNPQELFTINLVT------------G 1194
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQK------ 113
++ TS +DRE A++ L + +D K+ + V + VLD NDN P F K
Sbjct: 1195 LISTTSRQLDREYKAEHILEVAVSDNGDPALKSTSRVVIQVLDANDNPPSFPHKLFMVQL 1254
Query: 114 -----------VYRFIVGDLKSSLNSNVSH 132
VYR I D NS V++
Sbjct: 1255 PEREASETPLPVYRLIASDRDQGQNSQVTY 1284
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 61/132 (46%), Gaps = 21/132 (15%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE+ +Y L + A+D G +A T V + VLD NDNSP Q Y V + ++
Sbjct: 2979 LDREDTEKYLLKVMASD--GKFQATTEVEIFVLDINDNSPECGQIFYTGRVSE-----DA 3031
Query: 129 NVSHWKKFSSIGSVSATDAD---GDKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVE 184
H+ I +SATD D ++ Y L P + + TGE LT P D +
Sbjct: 3032 QPGHF-----ILKISATDPDVGSNAQITYSLHXPGAEEFRLGAHTGE--LTTSAPLDREQ 3084
Query: 185 ---YELTVEAHD 193
Y L +A D
Sbjct: 3085 KPTYHLVAKATD 3096
>gi|297676214|ref|XP_002816035.1| PREDICTED: protocadherin beta-3 isoform 2 [Pongo abelii]
Length = 796
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV+ G +DRE ++Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVSEGALDRETRSEYNITITVTDLGTPRLKTEYNITVLVSDVNDNAPFFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 LFALRSLDYEALQAFEFRVGASDRGSPA 540
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + SL +TA D ++ T + + VLD NDN+P F+Q +Y V +
Sbjct: 194 LVLDKALDREEQPELSLTLTALDGGAPPRSGTAQINIQVLDINDNAPEFAQPLYEVAVLE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
N+ V+ S I +VSA+D D
Sbjct: 254 -----NTPVN-----SVIVTVSASDLD 270
>gi|296472443|tpg|DAA14558.1| TPA: FAT tumor suppressor homolog 1-like [Bos taurus]
Length = 4588
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 123/298 (41%), Gaps = 44/298 (14%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G+ V H V Y I GN F + NP + I +T +D
Sbjct: 1681 GIGSFVGMVTAHSQSSVVYEIKDGNVADAFDI-NPHSGSI------------ITQKALDF 1727
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E + Y+L I T++ G++ T V V +LDENDN P+F Q Y ++ + +S+NS V
Sbjct: 1728 ETLPIYTLTIQGTNMAGLS-TNTTVLVHLLDENDNLPLFVQAEYTGLISE-SASINSVVL 1785
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVE 184
+ + + ATDAD + + Y + PS I TG + +L+ D +
Sbjct: 1786 TDRNVPLV--IRATDADRESNALLVYHIVEPSVHKYFTIDSSTGAIHTVLSLD-YEETST 1842
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAV 244
+ TV+ HD+ +P +A A V + +ID P +
Sbjct: 1843 FHFTVQVHDMGTPRLFAEYAANV-------------TIHVIDINDCPPVFSTSLYEASLL 1889
Query: 245 RPTKR------IDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
PT R ++ ++ D ++++++ + EKF + + ITV +R +
Sbjct: 1890 LPTYRGVKVVAVNATDADSSAFSQLMYSITEGNIGEKFLMDRKTGTITVQNTTQLRSR 1947
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 32/199 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + YSI GN++ F++ +SK+G + + +
Sbjct: 3246 GTEVLQVYAASRDIEANAEITYSIISGNEHGKFSI------------DSKTGAIFIIE-N 3292
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L + ATD ++ T V+++V D NDN+PVFSQ Y +V + + L
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVAT-VSINVTDINDNAPVFSQDTYTAVVSE-DAVL 3350
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
S+ +V A DADG + Y + + I P GE+ +T +
Sbjct: 3351 E---------QSVITVMADDADGPSNSHIHYAIIDGNQGSPFTIDPARGEVKVTKLLDRE 3401
Query: 182 DVE-YELTVEAHDLQSPSR 199
+ Y LTV+A D SP R
Sbjct: 3402 TISGYTLTVQASDNGSPPR 3420
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + +P +RY I G++ + F + + +R T+
Sbjct: 45 ENSAAKTYV-GHPVKMGIYMTNPLWELRYKIISGDNENLFKAEEYVLGDFCFLRIRTKGG 103
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A T V V VLD ND P+FS Y
Sbjct: 104 NTAIL------NREVKDHYTLIVKAVEKNTNAEARTQVRVQVLDTNDLRPLFSPTSYSV- 156
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 157 ------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGTIVLT 207
Query: 176 G 176
G
Sbjct: 208 G 208
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 13/91 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ SK+G++ T+ +DRE+ ++ L +T TD
Sbjct: 1174 LTYKITSGNPQGFFSIN------------SKTGLITTTARKLDREQQDEHILEVTVTDNG 1221
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRF 117
K T V V +LDENDN P F QK Y+
Sbjct: 1222 SPPKLTITRVIVKILDENDNKPQFLQKFYKI 1252
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 78/175 (44%), Gaps = 36/175 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N I+N + + +DREE Y L ITATD
Sbjct: 2954 VTYYITGGDPLGQFAIEN-----IQNEWK------VYVKKPLDREERDSYLLTITATD-- 3000
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS--IGSVSAT 145
G ++ V V VLD NDN+PV + +Y S+ F I VSAT
Sbjct: 3001 GTFSSKAIVEVKVLDANDNTPVCEKTLY------------SDTIPEDAFPGKLIMQVSAT 3048
Query: 146 DAD---GDKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHD 193
DAD ++ Y L P + + P TGEL + P D E Y L V+A D
Sbjct: 3049 DADIRSNAEITYTLFGPGAEKFKLNPDTGELKTSA--PLDREEQAAYHLLVKATD 3101
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y+I GN F + +P E++ + +DRE ++ Y+L + A+D
Sbjct: 3370 IHYAIIDGNQGSPFTI-DPARGEVK------------VTKLLDRETISGYTLTVQASDNG 3416
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+PVFS+ Y I+
Sbjct: 3417 SPPRVTTTTVNIDVSDVNDNAPVFSRGNYSLII 3449
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 109/271 (40%), Gaps = 47/271 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
L TS +DREE A Y L++ ATD G + V + + D NDN+P FS Y V
Sbjct: 3079 LKTSAPLDREEQAAYHLLVKATDGGG-RFCQASVVLTLEDVNDNAPEFSADPYTITV--- 3134
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVIVPQTGELLLTGDPP 179
+ + + + V ATDAD K++Y L ++ + + ++ P
Sbjct: 3135 -------FENTEPGTLLTRVQATDADAGLNRKISYSLLNSADGQFSINELSGIIQLEKPL 3187
Query: 180 SDDVE--YELTVEAHDLQSPSRYAREPAQVW----LQFNSPVLQDEQLLQMIDRKSEAPH 233
+++ Y LT++A D P R V + N PV + + + +
Sbjct: 3188 DRELQAVYTLTLKAVDHGLPRRLTATGTIVISVLDINDNPPVFEYREYGATVSE--DILI 3245
Query: 234 RIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDV 293
E +V A R D E I +++ E KF I + I + EN D
Sbjct: 3246 GTEVLQVYAASR----------DIEANAEITYSIISGNEHGKFSIDSKTGAIFIIENLDY 3295
Query: 294 RVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
E + ++++T+ +AT+GG
Sbjct: 3296 -------------ESSHEYYLTV--EATDGG 3311
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 14/87 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ GN++ F + + ++G+L + S +DRE +Y+L IT +D+
Sbjct: 754 YAVSGGNEDSCFIM------------DMETGMLKILS-PLDRETTDRYTLNITVSDLGLP 800
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVY 115
+A H+ + VLD NDN P F Q+ Y
Sbjct: 801 QRAAWHLLEIRVLDANDNPPEFLQESY 827
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 13/88 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSIT+G+ F + T GV+ V + +D E Y L I ATD
Sbjct: 2214 VHYSITEGDPFSQFTVNFNT------------GVISVVA-PLDFESHPAYKLSIRATDSL 2260
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVY 115
AE V + V D NDN PVF+Q+ Y
Sbjct: 2261 TGAHAEVFVDIIVEDINDNPPVFAQQSY 2288
>gi|296192981|ref|XP_002744306.1| PREDICTED: protocadherin beta-6 [Callithrix jacchus]
Length = 794
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 86/185 (46%), Gaps = 28/185 (15%)
Query: 30 YSITQGNDNHT----FALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
+S++ + H +++N +R S E+ + VT G +DRE A+Y+++I TD
Sbjct: 366 FSVSDADSGHNQQVICSIENNLPFLLRPSMENFYTI--VTEGALDRETRAEYNIIIIVTD 423
Query: 86 VKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+ K E +TV V D NDN+P F+Q Y V + NS H IG+VSA
Sbjct: 424 LGTPRLKTEHSITVRVSDVNDNAPAFTQTSYTLFVRE----NNSPALH------IGTVSA 473
Query: 145 TDADGD---KVAYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
TD D +V Y L P ++LV I G L + ++ +E V A D
Sbjct: 474 TDRDSGTNAQVTYSLLQPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATD 533
Query: 194 LQSPS 198
SP+
Sbjct: 534 RGSPA 538
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 45 NPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLD 102
NP H + RN +E + LV + +DREE + L +TA D ++ T + + VLD
Sbjct: 174 NPHFHVLTRNRSEGRKFPELVLNKPLDREEQPRLRLTLTALDGGSPPRSGTSEIQIQVLD 233
Query: 103 ENDNSPVFSQKVY 115
NDN P F+Q++Y
Sbjct: 234 INDNVPEFAQELY 246
>gi|292620786|ref|XP_001920058.2| PREDICTED: protocadherin Fat 2 [Danio rerio]
Length = 4342
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 110/238 (46%), Gaps = 44/238 (18%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G P+L S+ + P V Y I +G+ N TF + SG+L V + +D
Sbjct: 1674 GSPVLSVSA-RCPSS-VLYRINEGDPNGTFHIN------------INSGLLSVKNA-LDF 1718
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E+ + Y L I+AT+ GI+ ++ V V V+D NDN+PVF Q VY + + + +NS V+
Sbjct: 1719 EQHSSYHLQISATNTAGIS-SDAVVFVYVIDANDNAPVFHQDVYYGQISE-SAPVNSMVT 1776
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPS--NLVVIVPQTGELLLTGDPPSDDV-EY 185
+ + A+DAD D + Y++ P+ + I P G + L + E+
Sbjct: 1777 GENNTPLV--IKASDADKDTNALLVYQILEPAAHEVFKIDPSMGTISLKSLIDFEATPEF 1834
Query: 186 ELTVEAHDLQSPSRYAREPAQVW---LQFNS----------------PVLQDEQLLQM 224
+V+ D PS A +P +V L FN PV QD +++Q+
Sbjct: 1835 FFSVQVWDSGEPSLSASKPCKVIIRVLDFNDCPPKFVLPVYEIALTWPVFQDMKVIQV 1892
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 85/172 (49%), Gaps = 37/172 (21%)
Query: 26 QLVRYSITQGNDNHTFALK-NPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+VR S+ N TF+++ NP +++ + S +K+GV+ VTS +D E Y +TA
Sbjct: 382 HVVRVSVGLSLKNTTFSIQENPDSYKFKIS--AKTGVI-VTSQSLDFENRNHYEFDVTAN 438
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
D +A T V VD+ DENDN+P F+ Y ++SL NV + +S+ SVSA
Sbjct: 439 D----GEAVTRVIVDITDENDNAPSFTLPSY-------QASLPENV---RIGTSVLSVSA 484
Query: 145 TDADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDP------PSDDVEYEL 187
D D D V Y +A TG + + DP S + +YEL
Sbjct: 485 IDVDKDNNGFVTYAIA----------NTGPVPFSIDPLTGVISTSQEFDYEL 526
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 79/176 (44%), Gaps = 34/176 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
YSI+ GN++ F + + +G L V +DRE+ Y L IT D+ G
Sbjct: 752 YSISSGNEDGCFTI------------DVNAGDLKVICA-LDREQKEFYILNITVYDL-GY 797
Query: 90 NKAET--HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ T + V++LD NDN P+FSQ Y + + N+ V SI V+A D
Sbjct: 798 PQTSTWKLLAVNILDANDNPPLFSQSRYVVTIPE-----NTEVD-----KSIFKVNAVDF 847
Query: 148 DGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDD---VEYELTVEAHDLQSP 197
D D Y L ++L I TG + + G P D Y+LT+EA D P
Sbjct: 848 DLDNNGAFKYSLFTFTDLFQIEEDTGVVKVIG--PLDRETFRRYDLTIEARDQAKP 901
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 15/101 (14%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYR 116
SGVL VT+ +D E Q++L + ATD KG+ E H+ V+V+D NDN P FS+ YR
Sbjct: 2323 SGVL-VTTQVLDYESTQQFTLKVKATD-KGVPPLSGEAHIIVNVIDVNDNPPDFSEPSYR 2380
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG-DKVAYKL 156
+ ++ + N + V A+D D D + YK+
Sbjct: 2381 ASLDEMATCGNIVI----------KVQASDPDSKDDLQYKI 2411
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 78/181 (43%), Gaps = 31/181 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLV 80
P ++Y I G+D+ F + + +R T S + +L +RE Y+L
Sbjct: 67 PFWNIKYKIVSGDDDGLFQTEKEDVGDFSFLRIITRSSNSAVL------NREVRDIYTLT 120
Query: 81 ITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD---LKSSLNSNVSHWKKFS 137
+ AT+ N+A T V + VLD ND P+F Y ++ + +KSSL
Sbjct: 121 VEATESTFDNRARTKVLIQVLDTNDLKPLFYPASYHVVIKEDTPIKSSL----------- 169
Query: 138 SIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEAH 192
VSATDAD + Y S+ + P TG + L D D Y+LTV A
Sbjct: 170 --VRVSATDADIGSNAEFYYSFTTRSHPFAVDPFTGTVTLVKRLDTSQRD-RYDLTVLAE 226
Query: 193 D 193
D
Sbjct: 227 D 227
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 75/160 (46%), Gaps = 29/160 (18%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
ME++K GT V L + + +VRY I G+ F + + ++G
Sbjct: 1042 MEDAKIGTSV--LTLTAVDNDLGRDGVVRYYIHDGSGLGVF------------TVDEETG 1087
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIV 119
V+ T+G +DRE V Y L + A D+ I T V ++V D NDN P SQ VY
Sbjct: 1088 VIQ-TAGLLDREVVPHYWLTVYAKDLGTIPLVSWTEVYIEVWDINDNPPELSQPVY---F 1143
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKL 156
G ++ +L K S+ VSATD D K+A+++
Sbjct: 1144 GSVQENL-------PKDKSVLKVSATDMDKSSEGKLAFQI 1176
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 59/122 (48%), Gaps = 15/122 (12%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
K+GVL VT +D E ++ L + ATD AE V +DV D NDN+PVF Y
Sbjct: 2219 KTGVLSVTDF-LDFESETKHILTVRATDSVSGTFAEAKVEIDVEDINDNAPVFQNLSY-- 2275
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLA-VPSNLVVIVPQTGELL 173
V D+ L +S+ VSA D D DK A Y+L S+ I P +G L+
Sbjct: 2276 -VADVFEGLPIG-------TSVLQVSAVDRDADKNAEATYQLIDKESHFFEIDPLSGVLV 2327
Query: 174 LT 175
T
Sbjct: 2328 TT 2329
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 14/97 (14%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + YSI G+ F++ + ++G + + S +DREE+ YSL + A
Sbjct: 3346 PNNFIIYSIVSGDPKQQFSI------------DPRTGFITLRSM-LDREEITHYSLTVQA 3392
Query: 84 TDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIV 119
D + VTV V D NDN P+FS+ + IV
Sbjct: 3393 ADEGDPPLSSAVQVTVTVSDVNDNPPMFSKINHSLIV 3429
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 88/198 (44%), Gaps = 29/198 (14%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS+ G + L Q+V Y IT G+ F++ T
Sbjct: 2909 LENSRPGENIVTLTTADKDVSAENRQIVCY-ITDGDPLGQFSV-----------TAVGEE 2956
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+++ +DRE+ +Y+L I ATD G + +V V VLD NDNSP Q Y
Sbjct: 2957 WTVISKSPLDREDKDKYTLKIIATD--GRFQTSANVEVHVLDLNDNSPFCEQLQY----- 3009
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVP-SNLVVIVPQTGELL-LT 175
++ N S K I +SA+D D +V++ L P ++ + P+TGEL L
Sbjct: 3010 --TEAVMENSSSGK---VILKISASDPDIGTNGQVSFTLHGPNADKFHLDPKTGELFTLA 3064
Query: 176 GDPPSDDVEYELTVEAHD 193
+ EY+L V+A D
Sbjct: 3065 VLDREREKEYDLVVKATD 3082
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 85/202 (42%), Gaps = 31/202 (15%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E+S+ G+ V + L + ++ + VRYSI GN++ F + NP T
Sbjct: 3222 ESSQVGSEVISVSALTKDATEN--EPVRYSIISGNEDGRFMI-NPVTG------------ 3266
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LL +D E +Y L + K + V +++ D NDN PVF++ Y ++ +
Sbjct: 3267 LLSVKAALDFERCREYYLSVEGARGKPLLSDIAMVIINITDVNDNPPVFNRSSYSTVIPE 3326
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAV--PSNLVVIVPQTGELLLTG 176
S + V A D DG + + Y + P I P+TG + L
Sbjct: 3327 DISPGEMAL----------QVRAIDLDGPPNNFIIYSIVSGDPKQQFSIDPRTGFITLRS 3376
Query: 177 DPPSDDV-EYELTVEAHDLQSP 197
+++ Y LTV+A D P
Sbjct: 3377 MLDREEITHYSLTVQAADEGDP 3398
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 6/72 (8%)
Query: 48 THEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG---INKAETHVTVDVLDEN 104
+ I + +SK+GV+ S +DRE+ A++ + + +D KG ++ T V ++VLDEN
Sbjct: 1179 SQRIYFTIDSKTGVISTLSS-LDREQKAEHIIEVMVSD-KGEPPLSSTAT-VVIEVLDEN 1235
Query: 105 DNSPVFSQKVYR 116
DNSP FS K+++
Sbjct: 1236 DNSPQFSHKLFQ 1247
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH 95
N +F L P + + K+G L T +DRE +Y LV+ ATD G +
Sbjct: 3036 NGQVSFTLHGPNADKFH--LDPKTGELF-TLAVLDREREKEYDLVVKATDGGG-RSCQAD 3091
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGD 121
VT+ V D NDN P FS Y V D
Sbjct: 3092 VTLMVQDMNDNPPQFSTSHYEVTVFD 3117
>gi|338713598|ref|XP_001917824.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-8-like [Equus
caballus]
Length = 760
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 85/177 (48%), Gaps = 26/177 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE+ +Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTEKPLDREDKDEYNVTITVTDLGTPRLKTELNITVLVSDVNDNAPAFTQTSYTLWVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D ++ Y L P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDTDAGANAQLTYSLLPPQDPHLPLASLVSINADNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQF---NSP-VLQDEQLLQ 223
L + ++ +E V A D SP+ ++ +V L NSP VL QLL+
Sbjct: 513 LFALRSLDYEALQPFEFGVGATDRGSPALSSQARVRVLLLXANDNSPFVLYPYQLLK 569
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 71/143 (49%), Gaps = 19/143 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + L +TA D ++ T V ++V+D NDN+P F Q YR + +
Sbjct: 194 LVLDKALDREEEPELRLTLTAQDGGSPPRSGTAQVYIEVVDINDNAPEFEQPFYRVQIPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL-AVP---SNLVVIVPQTGELLL 174
+S + I +VSATDAD +++Y L P S I P+TGE+ L
Sbjct: 254 -----DSPIGFL-----IVTVSATDADIGANGEISYSLFQAPEEISKTFEINPKTGEIRL 303
Query: 175 TGDPPSDDVE-YELTVEAHDLQS 196
+ V+ YE+ +EA D S
Sbjct: 304 KKQLDFETVQSYEVNIEARDAGS 326
>gi|432951766|ref|XP_004084895.1| PREDICTED: protocadherin gamma-A12-like [Oryzias latipes]
Length = 537
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 92/185 (49%), Gaps = 37/185 (20%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
RY++ Q NDN A+ N + V LV +DRE+ + +L++TA D
Sbjct: 168 RYTL-QKNDNFILAVDN-------------NKVELVLENTLDREKQSDMNLLLTAVDGGS 213
Query: 89 INKAET---HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
++ T HVTV LD NDN+PVFSQ VY K++L N + + +VSAT
Sbjct: 214 PQRSGTVIIHVTV--LDANDNAPVFSQDVY-------KATLPEN---SPPETLVITVSAT 261
Query: 146 DAD---GDKVAYKLAVPSN----LVVIVPQTGELLLTGDPPSDD-VEYELTVEAHDLQSP 197
DAD V Y+ S+ + +I ++GE+ LTG ++ +E+ VEA D
Sbjct: 262 DADEGVNADVTYQFGHVSDDDVHVFLIDQKSGEIRLTGLIDYEEFASFEIRVEAKDGLGL 321
Query: 198 SRYAR 202
+ YA+
Sbjct: 322 TAYAK 326
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+V++G +DRE V+ Y++ I+ATD ++ ++T V + V D NDN PVF ++ Y V
Sbjct: 398 VVSTGQLDRELVSDYNITISATDEGSPPLSSSKT-VHLSVADINDNPPVFEEQSYSAYVS 456
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + + S++ SVSA D D
Sbjct: 457 E----------NNQAGSTLCSVSARDPD 474
>gi|301605885|ref|XP_002932572.1| PREDICTED: cadherin-22-like [Xenopus (Silurana) tropicalis]
Length = 796
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 53/98 (54%), Gaps = 13/98 (13%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI---NKAETHVTVDVLDENDNSPVF 110
+ +SK+GV+ D+DRE +Y LVI ATD+ G T VT+ + D NDN P F
Sbjct: 208 TVDSKTGVIRTAVSDLDRESQDRYDLVIQATDMAGQLGGLSGSTTVTIVITDVNDNPPRF 267
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
QK+Y+F V +SS +V IG V A DAD
Sbjct: 268 PQKLYQFSVA--ESSPPGSV--------IGRVKAEDAD 295
>gi|334311079|ref|XP_003339578.1| PREDICTED: protocadherin beta-1-like [Monodelphis domestica]
Length = 790
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 80/149 (53%), Gaps = 24/149 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +DRE V+ Y++ +TA D+ ++ +ET VTV +LD NDN P+F+Q Y V
Sbjct: 404 LVTDAALDRERVSSYNVTVTAIDLGSPPLSASET-VTVQILDINDNLPLFNQSSYTMYVT 462
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKL-------AVPSNLVVIVPQTG 170
+ N++ S IG V+ATD+D KV Y + S L+ I + G
Sbjct: 463 E-----NNSPSLM-----IGGVNATDSDSGQNAKVTYSIWPENKSSLFSSPLISINSENG 512
Query: 171 ELLLTGDPPSDDV-EYELTVEAHDLQSPS 198
++ + +++ ++++TV+A D SPS
Sbjct: 513 QVYILKTLDYEEIKDFKVTVKASDSGSPS 541
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 141/333 (42%), Gaps = 57/333 (17%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQ--GNDNHTFALKNPTTHEIRNSTESKS 59
ENS +G+ V I A S + + V YS +Q G + F + +P T EIR
Sbjct: 253 ENSPAGSVVST--IFAADSDQGSNGEVTYSFSQNAGKSHRAFHI-DPLTGEIR------- 302
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSP-VFSQKVYRFI 118
S +D E Y L + ATD G++ + V V+V+D NDN P V + +
Sbjct: 303 -----ISKPLDFETTEYYELSVRATDGGGLS-SHCKVLVEVMDVNDNPPEVTVTSISTLL 356
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTG----ELL 173
D SL V + S D D GD ++P+++ + T EL+
Sbjct: 357 PED---SLTGTV--------VALFSIRDRDSGDHGRTTCSIPNDIPFTLKPTFSNYYELV 405
Query: 174 LTGDPPSDDV-EYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
+ V Y +TV A DL SP A E V +L L + ++ S
Sbjct: 406 TDAALDRERVSSYNVTVTAIDLGSPPLSASETVTVQ------ILDINDNLPLFNQSSYTM 459
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVD-ENG 291
+ E + + ++ +++D ++ +++ E + F +P I+++ ENG
Sbjct: 460 YVTENNSPSLMI---GGVNATDSDSGQNAKVTYSIWPENKSSLFS----SPLISINSENG 512
Query: 292 DVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
V + K D+EE+ DF VT+ +A++ G
Sbjct: 513 QVYILKTLDYEEIK-----DFKVTV--KASDSG 538
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 21/141 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
++ + +DREE ++ ++TA D GI + + VLD NDN+PVFSQ +YR V
Sbjct: 194 MLLAKSLDREEQPEFEFLLTAVD-GGIPPRTGTASIRIIVLDANDNAPVFSQSLYRATVA 252
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSN----LVVIVPQTGELL 173
+ NS S + ++ A D+D +V Y + + I P TGE+
Sbjct: 253 E-----NSPAG-----SVVSTIFAADSDQGSNGEVTYSFSQNAGKSHRAFHIDPLTGEIR 302
Query: 174 LTGDPPSDDVE-YELTVEAHD 193
++ + E YEL+V A D
Sbjct: 303 ISKPLDFETTEYYELSVRATD 323
>gi|300794923|ref|NP_001179921.1| protocadherin Fat 1 precursor [Bos taurus]
Length = 4588
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 123/298 (41%), Gaps = 44/298 (14%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G+ V H V Y I GN F + NP + I +T +D
Sbjct: 1681 GIGSFVGMVTAHSQSSVVYEIKDGNVADAFDI-NPHSGSI------------ITQKALDF 1727
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E + Y+L I T++ G++ T V V +LDENDN P+F Q Y ++ + +S+NS V
Sbjct: 1728 ETLPIYTLTIQGTNMAGLS-TNTTVLVHLLDENDNLPLFVQAEYTGLISE-SASINSVVL 1785
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVE 184
+ + + ATDAD + + Y + PS I TG + +L+ D +
Sbjct: 1786 TDRNVPLV--IRATDADRESNALLVYHIVEPSVHKYFTIDSSTGAIHTVLSLD-YEETST 1842
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAV 244
+ TV+ HD+ +P +A A V + +ID P +
Sbjct: 1843 FHFTVQVHDMGTPRLFAEYAANV-------------TIHVIDINDCPPVFSTSLYEASLL 1889
Query: 245 RPTKR------IDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
PT R ++ ++ D ++++++ + EKF + + ITV +R +
Sbjct: 1890 LPTYRGVKVVAVNATDADSSAFSQLMYSITEGNIGEKFLMDRKTGTITVQNTTQLRSR 1947
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 92/199 (46%), Gaps = 32/199 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + YSI GN++ F++ +SK+G + + +
Sbjct: 3246 GTEVLQVYAASRDIEANAEITYSIISGNEHGKFSI------------DSKTGAIFIIE-N 3292
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L + ATD ++ T V+++V D NDN+PVFSQ Y +V + + L
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVAT-VSINVTDINDNAPVFSQDTYTAVVSE-DAVL 3350
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
S+ +V A DADG + Y + + I P GE+ +T +
Sbjct: 3351 E---------QSVITVMADDADGPSNSHIHYAIIDGNQGSPFTIDPARGEVKVTKLLDRE 3401
Query: 182 DVE-YELTVEAHDLQSPSR 199
+ Y LTV+A D SP R
Sbjct: 3402 TISGYTLTVQASDNGSPPR 3420
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + +P +RY I G++ + F + + +R T+
Sbjct: 45 ENSAAKTYV-GHPVKMGIYMTNPLWELRYKIISGDNENLFKAEEYVLGDFCFLRIRTKGG 103
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A T V V VLD ND P+FS Y
Sbjct: 104 NTAIL------NREVKDHYTLIVKAVEKNTNAEARTQVRVQVLDTNDLRPLFSPTSYSV- 156
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 157 ------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGTIVLT 207
Query: 176 G 176
G
Sbjct: 208 G 208
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 47/91 (51%), Gaps = 13/91 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ SK+G++ T+ +DRE+ ++ L +T TD
Sbjct: 1174 LTYKITSGNPQGFFSIN------------SKTGLITTTARKLDREQQDEHILEVTVTDNG 1221
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRF 117
K+ T V V +LDENDN P F QK Y+
Sbjct: 1222 SPPKSTITRVIVKILDENDNKPQFLQKFYKI 1252
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 78/175 (44%), Gaps = 36/175 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N I+N + + +DREE Y L ITATD
Sbjct: 2954 VTYYITGGDPLGQFAIEN-----IQNEWK------VYVKKPLDREERDSYLLTITATD-- 3000
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS--IGSVSAT 145
G ++ V V VLD NDN+PV + +Y S+ F I VSAT
Sbjct: 3001 GTFSSKAIVEVKVLDANDNTPVCEKTLY------------SDTIPEDAFPGKLIMQVSAT 3048
Query: 146 DAD---GDKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHD 193
DAD ++ Y L P + + P TGEL + P D E Y L V+A D
Sbjct: 3049 DADIRSNAEITYTLFGPGAEKFKLNPDTGELKTSA--PLDREEQAAYHLLVKATD 3101
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y+I GN F + +P E++ + +DRE ++ Y+L + A+D
Sbjct: 3370 IHYAIIDGNQGSPFTI-DPARGEVK------------VTKLLDRETISGYTLTVQASDNG 3416
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+PVFS+ Y I+
Sbjct: 3417 SPPRVTTTTVNIDVSDVNDNAPVFSRGNYSLII 3449
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 109/271 (40%), Gaps = 47/271 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
L TS +DREE A Y L++ ATD G + V + + D NDN+P FS Y V
Sbjct: 3079 LKTSAPLDREEQAAYHLLVKATDGGG-RFCQASVVLTLEDVNDNAPEFSADPYTITV--- 3134
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVIVPQTGELLLTGDPP 179
+ + + + V ATDAD K++Y L ++ + + ++ P
Sbjct: 3135 -------FENTEPGTLLTRVQATDADAGLNRKISYSLLNSADGQFSINELSGIIQLEKPL 3187
Query: 180 SDDVE--YELTVEAHDLQSPSRYAREPAQVW----LQFNSPVLQDEQLLQMIDRKSEAPH 233
+++ Y LT++A D P R V + N PV + + + +
Sbjct: 3188 DRELQAVYTLTLKAVDHGLPRRLTATGTIVISVLDINDNPPVFEYREYGATVSE--DILI 3245
Query: 234 RIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDV 293
E +V A R D E I +++ E KF I + I + EN D
Sbjct: 3246 GTEVLQVYAASR----------DIEANAEITYSIISGNEHGKFSIDSKTGAIFIIENLDY 3295
Query: 294 RVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
E + ++++T+ +AT+GG
Sbjct: 3296 -------------ESSHEYYLTV--EATDGG 3311
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 32/171 (18%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ GN++ F + + ++G+L + S +DRE +Y+L IT +D+
Sbjct: 754 YAVSGGNEDSCFIM------------DMETGMLKILS-PLDRETTDRYTLNITVSDLGLP 800
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVSATDA 147
+A H+ + VLD NDN P F Q+ Y F+ VS K+ +S I V ATD
Sbjct: 801 QRAAWHLLEIRVLDANDNPPEFLQESY-FV----------EVSEDKEINSEIIQVEATDK 849
Query: 148 D---GDKVAYKLAVPSNLVVIVPQTG--ELLLTGDPPSDDVEYELTVEAHD 193
D V Y + ++ I TG ++L D V Y L VEA D
Sbjct: 850 DLGPNGHVRYSILTDTDKFSIDSMTGVVKILNPLDREEQQVHY-LKVEARD 899
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 41/88 (46%), Gaps = 13/88 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSIT+G+ F + T GV+ V + +D E Y L I ATD
Sbjct: 2214 VHYSITEGDPFSQFTVNFNT------------GVISVVA-PLDFESHPAYKLSIRATDSL 2260
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVY 115
AE V + V D NDN PVF+Q+ Y
Sbjct: 2261 TGAHAEVFVDIIVEDINDNPPVFAQQSY 2288
>gi|410948471|ref|XP_003980962.1| PREDICTED: protocadherin beta-4, partial [Felis catus]
Length = 519
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 70/148 (47%), Gaps = 31/148 (20%)
Query: 37 DNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETH 95
DN F LK PT K+ LVT +DRE A+Y++ IT TD+ K + +
Sbjct: 386 DNLPFLLK-PTF---------KNFYTLVTESPLDRESRAEYNITITVTDLGTPRLKTQHN 435
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KV 152
+TV V D NDN+P FSQ Y V + NS H IGSVSATD D +V
Sbjct: 436 ITVTVSDVNDNAPAFSQTTYTLRVRE----NNSPALH------IGSVSATDRDSGANAQV 485
Query: 153 AYKLAVPSN-------LVVIVPQTGELL 173
Y L P++ LV I G+L
Sbjct: 486 TYSLLPPADPQLPLASLVSINADNGQLF 513
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 49/99 (49%), Gaps = 13/99 (13%)
Query: 52 RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPV 109
RN +E+K LV +DREE +SL + A D K+ T +TV +L D NDN+P
Sbjct: 182 RNHSEAKKYPDLVQDKALDREEQPAFSLTLIALDGGSPPKSGT-ITVRILITDVNDNAPE 240
Query: 110 FSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
F Y V + SSL+S V SVSA D D
Sbjct: 241 FVHTPYEVQVLE-NSSLDSPVL---------SVSAKDID 269
>gi|344269926|ref|XP_003406798.1| PREDICTED: desmoglein-2 [Loxodonta africana]
Length = 1116
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 126/281 (44%), Gaps = 50/281 (17%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRF 117
+G L VTS +DREE + LV A DV G N + + + VLD NDN PVF+Q V+
Sbjct: 106 TGDLNVTS-ILDREETPFFLLVGYALDVNGNNVEKPLELRIKVLDINDNEPVFTQDVFVG 164
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-----GDKVAYKLAV--PSNLVVIV--PQ 168
V +L + + + ++ATDAD K++Y++ P++L V
Sbjct: 165 SVEEL----------CARGTLVMKINATDADEPNTLNSKISYRIVSQEPASLPVFYLNKD 214
Query: 169 TGELL--LTGDPPSDDVEYELTVEAHD--LQSPSRYAREPAQVWLQF-----NSPVLQDE 219
TGE+ +T D + Y LTVEA D Q SR A++ AQV +Q N P +++E
Sbjct: 215 TGEIYTSITLD-REEHSSYSLTVEARDGNGQITSRPAKQ-AQVQIQILDVNDNIPRVENE 272
Query: 220 QLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIR 279
+ E +E R+ K D E G F E F I
Sbjct: 273 VYEGSVQ---ENQANVEVMRI-------KVFDADEI-GSDNWLANFTFASGNEGGYFHIE 321
Query: 280 DENPWITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQA 320
+ V G V + K D+EE+ KT+DF V + N+A
Sbjct: 322 TD----AVTNEGIVTLIKEVDYEEM---KTLDFSVIVTNKA 355
>gi|334311099|ref|XP_001377956.2| PREDICTED: protocadherin gamma-B5 [Monodelphis domestica]
Length = 934
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 100/210 (47%), Gaps = 34/210 (16%)
Query: 51 IRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSP 108
R + SK+ L+T G +DRE++ +Y++ +TATD KG T +T+++ D NDN P
Sbjct: 392 FRLESSSKNYYKLLTDGPLDREQIPEYNITVTATD-KGNPPLSTSKTLTLNIADVNDNHP 450
Query: 109 VFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA------VP 159
VF Q Y V + S +SI VSA+D+D +V+Y + +P
Sbjct: 451 VFLQPSYVVYVPENNPSA----------ASIARVSASDSDLEGNGRVSYSIVSSDLAPLP 500
Query: 160 -SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL-------- 209
S+ V + +G++ + V +ELT++A D SP+ A +V++
Sbjct: 501 LSSYVSVNGHSGDIFAQRSFDYEQVRTFELTLQACDSGSPALCANVTLRVFVLDRNDNAP 560
Query: 210 QFNSPVLQDEQ--LLQMIDRKSEAPHRIEK 237
P L ++ L M+ R +E + + K
Sbjct: 561 NILYPALGPDRSALFDMVPRSAEPGYLVSK 590
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 45 NPT-THEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET---HVTVDV 100
NP + E++ + LV +DRE + Y L+++A D G N A + + + V
Sbjct: 175 NPVFSFEVKKKKDGNKYAELVLEKLLDRERQSSYHLILSAVD--GGNPARSSTAQIRIKV 232
Query: 101 LDENDNSPVFSQKVYR 116
D NDN+PVFSQ +Y+
Sbjct: 233 TDANDNAPVFSQDIYK 248
>gi|296485264|tpg|DAA27379.1| TPA: protocadherin beta 16-like [Bos taurus]
Length = 1591
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 72/149 (48%), Gaps = 22/149 (14%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V
Sbjct: 1194 ILMTEGALDRESQAEYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLWVR 1253
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYK-------LAVPSNLVVIVPQTG 170
+ NS H IGSVSATD D +V Y L ++LV I P G
Sbjct: 1254 E----NNSPALH------IGSVSATDTDAGANAQVTYSLLPPPDPLVPLASLVSINPDNG 1303
Query: 171 ELL-LTGDPPSDDVEYELTVEAHDLQSPS 198
L LT +E V A D SP+
Sbjct: 1304 HLFALTSLDYEALRAFEFRVGATDRGSPA 1332
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 70/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y+++I TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTERPLDRETRAEYNIIIAVTDLGTPKLKTEHNITVLVSDVNDNAPTFTQTSYTLWVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYK-------LAVPSNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L ++LV I P G
Sbjct: 463 ----NNSPALH------IGSVSATDTDAGANAQVTYSLLPPPDPLVPLASLVSINPDNGH 512
Query: 172 LL-LTGDPPSDDVEYELTVEAHDLQSPS 198
L LT +E V A D SP+
Sbjct: 513 LFALTSLDYEALRAFEFRVGATDRGSPA 540
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV ++DREE + SL +TA D + T V ++V+D NDN+P F Q +Y+ + +
Sbjct: 985 LVLDKELDREEEPEISLTLTALDGGSPPRYGTAQVRIEVVDINDNAPQFQQLLYKVHIPE 1044
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP----SNLVVIVPQTGELLL 174
NS V S + +VSA+D D K++Y P S + + P+TGE+ L
Sbjct: 1045 -----NSPVG-----SLVVTVSASDVDSGLYGKISYTFFQPSEDISKTLEVNPKTGEIRL 1094
Query: 175 TGDPPSDDV-EYELTVEAHD 193
+ V YE+ V+A D
Sbjct: 1095 RKQVDFETVFSYEVDVKATD 1114
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 19/145 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE A++ L +TA D ++ T H+ ++V+D NDN+P F Q YR + +
Sbjct: 194 LVLDKVLDREEEAEFRLTLTAQDGGSPPRSGTAHIYIEVVDINDNAPEFEQPFYRVKIPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVV----IVPQTGELLL 174
K F + VSATD D +++Y L+ S + I TGE+ L
Sbjct: 254 ---------DSPKGFLVV-KVSATDVDTGVNGEISYSLSQASEDISKTFEINAMTGEIRL 303
Query: 175 TGDPPSDDVE-YELTVEAHDLQSPS 198
+ + YE+ +EA D S S
Sbjct: 304 KKQLDFETTQSYEVNIEAIDTGSLS 328
>gi|109506492|ref|XP_001055991.1| PREDICTED: protocadherin beta-10 [Rattus norvegicus]
gi|109507203|ref|XP_001065313.1| PREDICTED: protocadherin beta-10 [Rattus norvegicus]
gi|149017305|gb|EDL76356.1| rCG49451 [Rattus norvegicus]
Length = 792
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 108/252 (42%), Gaps = 41/252 (16%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIV 119
+L+T G +DRE +A+Y++ IT +D+ G K T +TV V D NDN+P F+Q Y V
Sbjct: 402 ILMTEGALDRESIAEYNITITVSDL-GTPKLTTQHTITVQVSDINDNAPAFTQTSYTLFV 460
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSN-------LVVIVPQT 169
+ NS H +G++SATD+D + Y L P + L+ I
Sbjct: 461 HE----NNSPALH------VGTISATDSDSGSNAHITYSLLPPQDPQLALDSLISINADN 510
Query: 170 GELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQD---EQLLQMI 225
G+L + ++ +E V A D SP+ ++ +V VL D E +
Sbjct: 511 GQLFALRALDYEALQAFEFHVGATDGGSPALNSQALVRVV------VLDDNDNEPFVLYP 564
Query: 226 DRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWI 285
+ + AP+ R ++ + D + F L K TE F + W
Sbjct: 565 LQNASAPYTELLPRTAEPGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFSV-----WA 619
Query: 286 TVDENGDVRVKK 297
NG+VR +
Sbjct: 620 ---HNGEVRTTR 628
>gi|426350409|ref|XP_004042767.1| PREDICTED: protocadherin beta-8, partial [Gorilla gorilla gorilla]
Length = 543
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 71/149 (47%), Gaps = 24/149 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVG 120
L+T +DRE A+Y++ IT TD+ G + TH+ + VL D NDN+P F+Q Y V
Sbjct: 146 LLTETPLDRESRAEYNVSITVTDL-GTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVR 204
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P N LV I G
Sbjct: 205 E----NNSPAMH------IGSVSATDRDSGTNAQVTYSLLPPQNPHLPLTSLVSINADNG 254
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 255 HLFALRSLDYEALQAFEFRVGASDRGSPA 283
>gi|354500156|ref|XP_003512168.1| PREDICTED: protocadherin-3-like isoform 1 [Cricetulus griseus]
Length = 797
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ H +TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTEGPLDRESRAEYNITITVTDLGTPRLTAQHTITVQVSDVNDNAPAFTQTSYTLFVQE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDKVAY 154
NS H IG++SATD+D A+
Sbjct: 463 ----NNSPALH------IGTISATDSDSGSNAH 485
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + +L +TA D ++ T V ++VLD NDN+P F Q +Y V +
Sbjct: 194 LVLDRALDREEQPELTLTLTAVDGGSPPRSGTTTVRIEVLDINDNAPQFVQSLYEVQVPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
NS V + + +VSA D D V Y L
Sbjct: 254 -----NSPVD-----ALVLTVSAMDLDAGIHGNVVYSL 281
>gi|109079041|ref|XP_001091535.1| PREDICTED: protocadherin beta-16 [Macaca mulatta]
Length = 776
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 70/147 (47%), Gaps = 22/147 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ +T TD+ K E ++TV + D NDN+P F+Q Y V +
Sbjct: 403 LVTERALDREARAEYNITLTVTDMGTPRLKTEHNITVQISDVNDNAPAFTQTFYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P S+LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPEDPHLPLSSLVSINADNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSP 197
L + ++ +E V A D SP
Sbjct: 513 LFALRSLDYEALQAFEFHVGAADRGSP 539
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 14/102 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV ++DREE Q L +TA D ++ T V ++V+D NDN+P F Q +Y+ + +
Sbjct: 194 LVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVHIEVVDINDNAPEFEQPIYKVRIPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPS 160
SSL S V+ +VSA D D K++Y L PS
Sbjct: 254 -NSSLGSLVA---------TVSARDLDSGANGKISYSLFQPS 285
>gi|336244973|gb|AEI28404.1| FAT tumor suppressor-like protein 4, partial [Naja atra]
Length = 254
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 78/190 (41%), Gaps = 32/190 (16%)
Query: 17 VASSHKHPHQL---VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREE 73
V S H L + Y IT G+ F + T L+ TS IDREE
Sbjct: 23 VGSVSAHTMDLNINITYLITTGDQKGMFEINKMTG-------------LITTSSIIDREE 69
Query: 74 VAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHW 133
A Y L A+ G + V + V D NDNSP F V S+N V +W
Sbjct: 70 QAFYQLKAVAS--GGTITGDALVNITVRDLNDNSPHFLHAV---------ESVNV-VENW 117
Query: 134 KKFSSIGSVSATDAD---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTV 189
+I A D D +VAY L P NL I Q+G + LTG +D Y++ +
Sbjct: 118 NTGHTIFQAKAVDPDEGANGRVAYSLKQNPKNLFSIDEQSGAISLTGLLDVNDGSYQVEI 177
Query: 190 EAHDLQSPSR 199
A DL P R
Sbjct: 178 MASDLGVPER 187
>gi|195571619|ref|XP_002103800.1| GD20623 [Drosophila simulans]
gi|194199727|gb|EDX13303.1| GD20623 [Drosophila simulans]
Length = 1975
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 103/258 (39%), Gaps = 65/258 (25%)
Query: 3 NSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL 62
N SG VK I AS KH + Y + GN++ F + T
Sbjct: 1443 NENSGRDVKIGHIQAASRSKHNRDIFYYMLL-GNEDGAFYVDKLTGD------------- 1488
Query: 63 LVTSGDIDREEVAQYSLVITAT---------------DVKGINKAET--HVTVDVLDEND 105
+ T+ +DREE Y+L I A+ +K +N+ T V + VLD ND
Sbjct: 1489 IYTNKSLDREETDVYTLYILASIKADLHISEEERASFSIKTLNRDNTVAKVAITVLDVND 1548
Query: 106 NSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA-----------Y 154
N PVF + +Y + +N+N K ++I V+ATDAD K A Y
Sbjct: 1549 NPPVFEKPIYY-------AGVNANA---KMGAAITLVNATDADQGKNAKIEFMIVASNLY 1598
Query: 155 KLAVPSNLVVIVPQTGELLLTGDPPSDDV-------EYELTVEAHDLQSPSRYAREPAQV 207
K + IVP + G ++ + +EL + A +L+ P R A +
Sbjct: 1599 KFGATKSTGSIVPSPFAISQDGRISANTIMAEYNQDRFELEIVARELEQPQRSASTKVNI 1658
Query: 208 WLQFNSPVLQDEQLLQMI 225
W V QL+++I
Sbjct: 1659 W------VFDGTQLVRVI 1670
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 19/152 (12%)
Query: 54 STESKSG-VLLVTSGDIDREEVAQYSLVITATDVK--GINKAETH-VTVDVLDENDNSPV 109
S ++ +G V++ S +DRE++ + +L + A D + K+ T + +++LD NDN+PV
Sbjct: 1151 SIDAYTGNVMVANSSILDREQIKELTLSVVAQDKAPAAVQKSATATIHINILDVNDNAPV 1210
Query: 110 FSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPS--NLV 163
F++ VY S++ N + ++ +++ V A D D GD V Y + + L
Sbjct: 1211 FTRDVY-------NSTVAENAA-YQPPAALLQVQAIDQDEGLYGD-VRYIITAGNEMGLF 1261
Query: 164 VIVPQTGELLLTGDPPSDDVEYELTVEAHDLQ 195
+ Q+G + YELT+ A D Q
Sbjct: 1262 KLDAQSGIVYPAQSLSGKHGAYELTISARDTQ 1293
>gi|390342985|ref|XP_798777.3| PREDICTED: cadherin-23-like, partial [Strongylocentrotus purpuratus]
Length = 3673
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
EN+ G + +P + A + QLV Y+IT G D+ TF + + +G
Sbjct: 1829 FENAPVGQPITMIPPIRAINSDATGQLV-YTIT-GPDSQTFMIN-----------QLSAG 1875
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+ + +G +DRE Y + TD G+ T V ++VLD ND +P F+ VY F +
Sbjct: 1876 IQV--NGPLDRETKDFYEFGVIVTDSMGLTAMGT-VHINVLDVNDFAPAFNDSVYNFTIP 1932
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKV----------AYKLAVPSNLVVIVPQTG 170
+ NS ++ +G VSA D DGD V + + S + + P G
Sbjct: 1933 E-----NSPGGYY-----VGGVSAYDLDGDNVNFFIQTGGEDKFDIGGTSGTITVTP--G 1980
Query: 171 ELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL 209
+L + P Y LTV DL++P ++L
Sbjct: 1981 AVLDREEKPF----YTLTVMVSDLRNPPLSGTATVYIYL 2015
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 70/146 (47%), Gaps = 19/146 (13%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIV 119
++ T+ +D E +++Y+L++TATD V V V D ND +P+F + VY
Sbjct: 1557 MISTTTALDWETISEYTLIVTATDQSPTEPRTGTATVIVSVNDINDGAPMFVRDVYG--- 1613
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYK-LAVPSNLVVIVPQTGELLLT 175
S+ VS+ S I S ATD D V Y + SNL I PQTG L +
Sbjct: 1614 ---PYSVVEEVSN----SYIDSFQATDTDQGLAGTVTYSVIGQYSNLFFIQPQTGVLTIR 1666
Query: 176 GDPPSDD---VEYELTVEAHDLQSPS 198
D D E+ +TV A D+ +P+
Sbjct: 1667 PDRALDYETITEFNITVVATDMGNPA 1692
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 13/100 (13%)
Query: 65 TSGDIDREEVAQYSLVITATDVKGINKA---ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
TSG ++RE V QY+ ++T D +A VT+++LD ND PV + Y F V
Sbjct: 717 TSGPLNRETVPQYNFLVTVLDNGSPQQAGNPPATVTINILDVNDEPPVLDRNSYEFTV-- 774
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSN 161
S ++ F +G V+ATD D VP++
Sbjct: 775 ------SEDVNFNTF--VGQVTATDPDLSGTLTYTFVPAD 806
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 77/182 (42%), Gaps = 34/182 (18%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ +V Y I GN+N+ F + G + + S +DRE QY L++ A
Sbjct: 1004 NAVVLYRIISGNNNNLFNVD-------------GQGNINLGSTPLDREMQDQYFLIVQAY 1050
Query: 85 DVK-GINKAETHVTVDVLDENDNSPVFSQK-VYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
+ + E V +++LD ND +P+F Q+ YR DL + S + F
Sbjct: 1051 NSDLSVGTNEVPVIINILDINDVTPLFQQQNYYR---PDLSENSPSGTPVLQVF------ 1101
Query: 143 SATDADGD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQ 195
A D D D V Y L N + I TG + + G P D+ + +TV A D
Sbjct: 1102 -AQDQDLDLAGDVQYSLIGNPNFLTINSDTGVISVNG--PIADLSGSRNFTMTVRATDQA 1158
Query: 196 SP 197
SP
Sbjct: 1159 SP 1160
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 16/105 (15%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
I V ++ + +RY I GN N+TF L + G++ V +D E
Sbjct: 2493 ITVVANDPDQNSNLRYEILGGNLNNTFVLVD-------------GGLIPVKP--LDFETF 2537
Query: 75 AQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
Y+L + TD G N+ T+V V V D ND++P F Y V
Sbjct: 2538 TNYNLTVVVTDDSG-NRDTTYVAVTVTDANDHNPTFVPDQYSLTV 2581
>gi|354500154|ref|XP_003512167.1| PREDICTED: protocadherin-3-like [Cricetulus griseus]
Length = 796
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ H +TV V D NDN+P F+Q Y V +
Sbjct: 402 LVTEGPLDRESRAEYNITITVTDLGTPRLTAQHTITVQVSDVNDNAPAFTQTSYTLFVQE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDKVAY 154
NS H IG++SATD+D A+
Sbjct: 462 ----NNSPALH------IGTISATDSDSGSNAH 484
>gi|195026491|ref|XP_001986268.1| GH21267 [Drosophila grimshawi]
gi|193902268|gb|EDW01135.1| GH21267 [Drosophila grimshawi]
Length = 3596
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 20/154 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK----AETHVTVDVLDENDNSPVFS 111
+S+SGV+ T +DRE Y +++TA+D+ A V V +LD+NDN P FS
Sbjct: 528 DSRSGVI-STRSSLDRETSDSYHMLVTASDMAAAQSERKTATASVVVKILDDNDNYPQFS 586
Query: 112 QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAV----PSNLVVIV 166
++ Y V + + ++NV+H + ATDAD G+ A + A+ + I
Sbjct: 587 ERTYTVQVPEDQWGDDNNVAH---------IRATDADQGNNAAIRYAIIGGNTQSQFSID 637
Query: 167 PQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSR 199
+G++ L + V Y L + A D SPSR
Sbjct: 638 SMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSR 671
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 80/174 (45%), Gaps = 32/174 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI++ +DN A+ +P T ++ T +DREE +++ + A D
Sbjct: 726 ISYSISERDDNFPLAV-DPRTGWVQ------------TIKPLDREEQNRFAFQVVAKD-G 771
Query: 88 GI--NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G+ A + V + V D NDN P F+ K Y VG+ + + + +V+AT
Sbjct: 772 GVPPKSASSSVVITVQDVNDNDPTFNPKYYEANVGEDQ----------PPGTPVTTVTAT 821
Query: 146 DADGD-KVAYKLAVPS--NLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHD 193
D D D ++ Y+++ + I Q G L+T P D + + LTV A D
Sbjct: 822 DPDEDSRLHYEISTGNTRGRFAITSQNGRGLITIAQPLDYKQEKRFLLTVTATD 875
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 82/181 (45%), Gaps = 39/181 (21%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
++TS +DRE + Y L +TA D + ++T V + V D NDN+P F +Y+ +
Sbjct: 961 IITSAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEISVTDVNDNAPAFKNPLYQSSI-- 1018
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA---VPSNLVVIVPQTGELL-- 173
L+ +L +S+ VSATD D ++ Y L+ VI P +G +
Sbjct: 1019 LEDALVG--------TSVIQVSATDPDIGLNGRIKYLLSDRDQEDGSFVIDPTSGTIRTN 1070
Query: 174 ------------LT------GDPP-SDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSP 214
LT G PP S VE ++ +E + SP +A + +++ NSP
Sbjct: 1071 KGLDRESVAIYHLTAIAVDKGSPPLSSTVEVQIRLEDVN-DSPPTFASDKITLYVPENSP 1129
Query: 215 V 215
V
Sbjct: 1130 V 1130
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 25/153 (16%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV-AQYSLVITATD 85
+V YSI G+D+++F+L R +E L+T ++D E ++ LV+ A
Sbjct: 1149 VVHYSIIGGDDSNSFSLVT------RPGSERAQ---LLTMTELDYESSRKRFELVVRAAS 1199
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
N A H+ + V D NDN+P D + N+ H+ IG + A
Sbjct: 1200 PPLRNDA--HIEILVTDVNDNAPELR---------DFQVIFNNFRDHFPS-GEIGRIPAF 1247
Query: 146 DAD-GDKVAYKLAVP--SNLVVIVPQTGELLLT 175
DAD DK+ Y++ +NL+ + +G L+L+
Sbjct: 1248 DADVSDKLNYRILSGNNANLLRLNSSSGGLILS 1280
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 23/105 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATDV 86
+RY+I GN F S +S SG V LV +D E V Y LVI A D
Sbjct: 621 IRYAIIGGNTQSQF------------SIDSMSGDVSLVKP--LDYESVRSYRLVIRAQDG 666
Query: 87 KGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+++ T + V+V+D NDN+P RF + S+ NV
Sbjct: 667 GSPSRSNTTQLLVNVIDANDNAP-------RFYTSQFQESVLENV 704
>gi|344238296|gb|EGV94399.1| Protocadherin-3 [Cricetulus griseus]
Length = 840
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ H +TV V D NDN+P F+Q Y V +
Sbjct: 368 LVTEGPLDRESRAEYNITITVTDLGTPRLTAQHTITVQVSDVNDNAPAFTQTSYTLFVQE 427
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDKVAY 154
NS H IG++SATD+D A+
Sbjct: 428 ----NNSPALH------IGTISATDSDSGSNAH 450
>gi|441596908|ref|XP_004087348.1| PREDICTED: cadherin-3 [Nomascus leucogenys]
Length = 829
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 252 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 303
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+PVF + Y
Sbjct: 304 DGDGSTTTAVAVVEILDANDNAPVFDPRKY 333
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DREE+A+Y L A G + + ++++ V D+ND+ P F+Q
Sbjct: 159 AVEKETGWLLLNK-PLDREEIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQ 217
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+R V L+ L +S+ V+ATD D
Sbjct: 218 DTFRGSV--LEGVLPG--------TSVMQVTATDED 243
>gi|332227587|ref|XP_003262973.1| PREDICTED: cadherin-3 isoform 1 [Nomascus leucogenys]
Length = 778
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 252 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 303
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+PVF + Y
Sbjct: 304 DGDGSTTTAVAVVEILDANDNAPVFDPRKY 333
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DREE+A+Y L A G + + ++++ V D+ND+ P F+Q
Sbjct: 159 AVEKETGWLLLNK-PLDREEIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQ 217
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+R V L+ L +S+ V+ATD D
Sbjct: 218 DTFRGSV--LEGVLPG--------TSVMQVTATDED 243
>gi|296192973|ref|XP_002744303.1| PREDICTED: protocadherin beta-3 [Callithrix jacchus]
Length = 796
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV+ G +DRE ++Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVSEGALDRETRSEYNVTITVTDLGTPRLKTEYNITVLVSDVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLALASLVSINADNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 LFALRSLDYEALQAFEFRVGATDRGSPA 540
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + SL +TA D ++ T + + VLD NDN+P F+ +Y V +
Sbjct: 194 LVLDKALDREEQPELSLTLTALDGGAPPRSGTAQINIQVLDINDNAPEFALPLYEVTVLE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
N+ V+ S I +VSA+D D
Sbjct: 254 -----NTPVN-----SVIVTVSASDLD 270
>gi|195503140|ref|XP_002098526.1| GE23891 [Drosophila yakuba]
gi|194184627|gb|EDW98238.1| GE23891 [Drosophila yakuba]
Length = 1705
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 26/169 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI GND FA+ +SGV++V +DRE + +Y L++ A D
Sbjct: 635 VVYSIISGNDLRQFAVGQ------------ESGVIIVIR-KLDRESLTRYQLILKAEDTG 681
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G++ + T V + V D ND +P F ++ V K +S+G V ATDA
Sbjct: 682 GLSSSAT-VNIKVTDINDKNPEFEASTLPYVF---------QVEEGKAQASVGVVHATDA 731
Query: 148 D-GDKVAYKLAVPSNLVVIVPQT-GELLLTGDPPSDDV-EYELTVEAHD 193
D G ++P+++ + T GE+L + + EY+ V A D
Sbjct: 732 DEGINAEITYSIPTDIPFTINATSGEILTAKQLDYEQLNEYKFVVTAKD 780
>gi|195036062|ref|XP_001989490.1| GH18776 [Drosophila grimshawi]
gi|193893686|gb|EDV92552.1| GH18776 [Drosophila grimshawi]
Length = 1972
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 104/258 (40%), Gaps = 65/258 (25%)
Query: 3 NSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL 62
N SG VK I AS KH + Y + GN++ F + T
Sbjct: 1437 NENSGRDVKIGHIQAASRSKHNRDIFYYMLL-GNEDGAFYVDKLTGD------------- 1482
Query: 63 LVTSGDIDREEVAQYSLVITAT---------------DVKGINKAET--HVTVDVLDEND 105
+ T+ +DRE+ Y+L I A+ +K +N+ T V + VLD ND
Sbjct: 1483 IYTNKSLDREQTDSYTLYILASIKADLHISEEERASFSIKNLNRDNTVAKVAITVLDVND 1542
Query: 106 NSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA-----------Y 154
N+PVF + VY + +N+N K ++I V+A+DAD K A Y
Sbjct: 1543 NAPVFEKSVYY-------AGVNANA---KMNAAITLVNASDADQGKNAKIEYMIVASNLY 1592
Query: 155 KLAVPSNLVVIVPQTGELLLTGDPPSDDV-------EYELTVEAHDLQSPSRYAREPAQV 207
K + IVP + G ++ + +EL + A +L+ P R A +
Sbjct: 1593 KFGAKKSTGSIVPSPFAISQDGRISANTIMAEYNQDRFELEIVARELEEPQRSANTKVYI 1652
Query: 208 WLQFNSPVLQDEQLLQMI 225
W V QL+++I
Sbjct: 1653 W------VFDGTQLVRVI 1664
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 79/152 (51%), Gaps = 19/152 (12%)
Query: 54 STESKSGVLLVTSGDI-DREEVAQYSLVITATDVK--GINKAETH-VTVDVLDENDNSPV 109
S ++ +G ++V + I DRE++ + +L + A D + K+ T + +++LD NDN+PV
Sbjct: 1145 SIDAYTGNVMVANASILDREQLKELTLSVVAQDKAPATVQKSATATIHINILDVNDNAPV 1204
Query: 110 FSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVV- 164
F++ VY S+++ N + ++ +++ V ATD D GD V Y + ++L +
Sbjct: 1205 FTRPVY-------NSTVSENAA-YQPPAALLQVQATDLDEGLFGD-VRYVITAGNDLALF 1255
Query: 165 -IVPQTGELLLTGDPPSDDVEYELTVEAHDLQ 195
+ Q+G + YEL + A D Q
Sbjct: 1256 KLDAQSGIIYPAQSLSGKHGVYELLISARDTQ 1287
>gi|443704241|gb|ELU01386.1| hypothetical protein CAPTEDRAFT_181060 [Capitella teleta]
Length = 2711
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 109/268 (40%), Gaps = 40/268 (14%)
Query: 48 THEIRNSTESKSGV-----LLVTSGDIDREEVAQYSLVITATD--VKGINKAETHVTVDV 100
++ I N+ + + + +L T+G+ DRE++A YS + ATD + G V V V
Sbjct: 1279 SYSINNAAQGQFSINNITGVLSTAGEFDREKIAHYSFEVYATDGGLYGPRSESVRVEVTV 1338
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA 157
D NDN PVF+Q YR ++ L N + VSATD D D ++ Y +
Sbjct: 1339 KDINDNFPVFTQYPYR---QEISQDLGVN-------QRVLQVSATDTDADDNGRIRYSFS 1388
Query: 158 VPSNLVVIVPQTGEL---LLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSP 214
S I TG + L G P + +V + L V A D SP++ + ++ +
Sbjct: 1389 TASQFFKIDSTTGVVKTRSLLG-PAAAEV-HRLNVLAVDQGSPAKSSTGLVEIHVG---- 1442
Query: 215 VLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETERE 274
L I R + + + R R+ + G I ++ E
Sbjct: 1443 -----SALGGILRFTNLTYNVHITEGARFGEHLTRVQARFISNQGSGLIAYSFASGNEDN 1497
Query: 275 KFKIRDENPWITVDENGDVRVKKRWDFE 302
F I + ITV+E + DFE
Sbjct: 1498 IFMIHQDTGNITVNEG------SKLDFE 1519
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 16/91 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V + I GND+ F+L +S +G+L + + +DRE VAQY L I+A D
Sbjct: 965 VSFDIVSGNDHSHFSL------------DSSTGLLQI-AKPLDREAVAQYLLNISAYD-H 1010
Query: 88 GINKAETH--VTVDVLDENDNSPVFSQKVYR 116
G+ + T+ +TV V+D ND+ PVF VY+
Sbjct: 1011 GLPRRTTYMKLTVGVIDVNDSPPVFQHSVYK 1041
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 18/96 (18%)
Query: 23 HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVIT 82
H ++++ YSI G+ F + T +V G +DRE ++Y+LV+
Sbjct: 1895 HVNKVIYYSIVSGDVESVFQVMGSTGE-------------IVLVGVLDRERRSKYNLVVM 1941
Query: 83 ATDVKG---INKAETHVTVDVLDENDNSPVFSQKVY 115
+D +G +N VT+ +LD NDN+PVF+ VY
Sbjct: 1942 GSD-RGEPPLNSTAP-VTITILDINDNTPVFNSSVY 1975
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 52/112 (46%), Gaps = 17/112 (15%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+EN+ GT V + S + V Y I +GN TF + S +G
Sbjct: 726 LENTAPGTIVGN--VTAKDSDSGENARVTYYIVRGNLFGTFGV------------HSTTG 771
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVF 110
+ V S +D EE ++YSL + A D +N + +V V ++D NDNSP F
Sbjct: 772 AIFV-SRPVDFEECSRYSLQVRAVDSNTVNPMSSIINVNVSIIDVNDNSPYF 822
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 15/85 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSIT GN ++ F + P T + K+ ++L DRE V+ Y L I A D
Sbjct: 1590 VTYSITSGNTHNAFVIDPPETGIV------KTNIIL------DREIVSTYRLEIEAID-G 1636
Query: 88 GIN--KAETHVTVDVLDENDNSPVF 110
G N A + V ++D NDNSP F
Sbjct: 1637 GRNPLSAICTLKVQIIDVNDNSPFF 1661
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 102/246 (41%), Gaps = 46/246 (18%)
Query: 69 IDREEVAQYSLVITATDVK-GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+D E ++ ++ A D+ G N+A V V+V D NDN+PVF Y F D+ S
Sbjct: 357 LDHEMTVRHEFMVHAYDLGPGDNQASMTVIVEVQDINDNAPVFEFSSYVF---DVSESRK 413
Query: 128 SNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDV- 183
+N KF G V A+DAD K+ Y++ N+ V + L D
Sbjct: 414 ANF----KF---GEVQASDADSGNNGKIRYQVQNGQNVDVFGVFADDGFLYNRVKLDRER 466
Query: 184 --EYELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQMIDRKSEAPHRIEKR 238
EY V A D PSR + V + N P+ Q+ + I +++ PH +
Sbjct: 467 RHEYSFVVLAVDNGVPSRSSSASVTVRVLDANDNDPIFQNIPYVFQI-TENQPPHTLVGV 525
Query: 239 RVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVD-ENGDVRVKK 297
S TD + ++++ LE N + +V+ E+G+V +
Sbjct: 526 -------------VSATDKDETNQLIYFLES-----------SNQYFSVNAESGEVLSSQ 561
Query: 298 RWDFEE 303
+ D EE
Sbjct: 562 QLDREE 567
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 13/100 (13%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
S + SG + V + ++D E + Y L I A+D I+ A V V+++D+NDN PVF Q+
Sbjct: 1708 SIDRYSGKITV-AKELDHEVMPVYRLRILASD--EIHNATAEVLVNLIDDNDNPPVFGQQ 1764
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA 153
Y+ + +L + +V+ATD+D D A
Sbjct: 1765 SYQVSIPELT----------PPDVQVLTVNATDSDSDDNA 1794
>gi|297482956|ref|XP_002693195.1| PREDICTED: protocadherin-16 [Bos taurus]
gi|296480033|tpg|DAA22148.1| TPA: dachsous 1 [Bos taurus]
Length = 3296
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+ G L +G +D E+ +Y L + A D G ++ ++TV V D NDNSP FSQ +Y+
Sbjct: 2324 RYGGRLSLTGPLDFEQRDRYHLQLLAHD--GPHEGRANLTVFVEDVNDNSPAFSQTLYQV 2381
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLL 174
++ + H S+I SVSATD D V+Y LA + I P G L
Sbjct: 2382 ML----------LEHTPPGSAILSVSATDRDSGANGHVSYHLASSAEGFSIDPNNGTLFT 2431
Query: 175 TGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWLQ 210
T + E ++ +EA D P R AR V LQ
Sbjct: 2432 TVGTVALGHEGPGMVDVVLEARDHGVPVRAARATVHVQLQ 2471
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVIT 82
H V YSI GN F L+ P E S L LV +D E + QY+L +
Sbjct: 2513 HAAVDYSIVSGNRGRVFQLE-PRLAEAGESDGLGPRALGCLVLLEPLDFESLTQYNLTVA 2571
Query: 83 ATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
ATD + + VTV VLD NDN PVF++ YR V
Sbjct: 2572 ATDRGQPPRSSAVPVTVSVLDVNDNPPVFTRAAYRVAV 2609
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 6/135 (4%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE Y L++ D ++ T V + VLD NDNSP F Q G L +
Sbjct: 1167 LDRERQNSYQLLVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTFLQ-ASGAAGGGLPIQVP 1225
Query: 128 SNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGELLLTGDP--PSDDVE 184
V +++ + + + + Y L P S L + P +GE LLT P ++
Sbjct: 1226 DGVPPGTLVTTLQAKDPDEGENGTILYMLTGPGSELFSLHPHSGE-LLTAAPLIRAERPH 1284
Query: 185 YELTVEAHDLQSPSR 199
Y LT+ AHD SP R
Sbjct: 1285 YVLTLSAHDQGSPPR 1299
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 25/131 (19%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LVR++++ G+ F L + SG L + +D E A++ LV+ A
Sbjct: 2631 PHGLVRFTLSSGDPLGLFEL------------DESSGDLRLAR-PLDCETQARHQLVVQA 2677
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G + A VT++V D ND+ P F + L +SL N +++ ++
Sbjct: 2678 ADPAGAHFALAPVTIEVQDVNDHGPAFPLSL-------LSTSLAENQPPGTLVTTLHAI- 2729
Query: 144 ATDADGDKVAY 154
DGD A+
Sbjct: 2730 ----DGDAGAF 2736
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 102/270 (37%), Gaps = 47/270 (17%)
Query: 43 LKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDV 100
L P++ E+R +T +DRE+ Y+ + A D T VT+ V
Sbjct: 1901 LLEPSSGELRTATT------------LDREQCPSYAFTVNAVDSAAAGPLSTTVPVTITV 1948
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA 157
D ND++P F R + ++ V + ++ A D D + Y+LA
Sbjct: 1949 RDVNDHAPTFPTSPLRLRLPRPGPVFSTPV------LPLATLRAEDRDAGANASILYRLA 2002
Query: 158 -VPSNLVVIVPQTGELLLTGDP----PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFN 212
P + TGE+ ++ P P D V L + A DL P+R A + LQ
Sbjct: 2003 GTPPPGTTVDSYTGEIRVSRSPVSLSPRDRV---LFIVATDLGRPARSATGVVIIGLQGE 2059
Query: 213 SPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETE 272
S E + SEA R T V P K I G G I +++ E
Sbjct: 2060 S-----EHGPRFSRASSEAMLRENAPPGTPVVSP-KAIHA----GGSSGPITYSILSGNE 2109
Query: 273 REKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ F I+ IT VR + DFE
Sbjct: 2110 KGTFSIQPSTGAIT------VRSAEGLDFE 2133
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 404 EGGEGH-FAL----------STQDSVIYLVCVARRLDREERDAYNLRVTATDSGSPPLRA 452
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + V D NDN+P F +++YR
Sbjct: 453 EAAFVLHVTDVNDNAPAFDRQLYR 476
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ TF L E R + LV +G++DRE + Y L + A D
Sbjct: 178 YALSGDGAGETFRL------ETRPGPDGAPVPELVVTGELDRENRSHYMLQLEAYDGGSP 231
Query: 90 -NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+A+ + V +LD ND++P F+Q Y V
Sbjct: 232 PRRAQALLDVTLLDINDHAPAFNQSRYHAAV 262
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHV-TVDVLDENDNSPVFSQKVYRFIV 119
+DRE+ A+Y L + A+D ++ T + TV V D ND +P F Q+ Y ++
Sbjct: 1605 LDREQRAEYVLTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEYSVLL 1656
>gi|209489409|gb|ACI49172.1| hypothetical protein Csp3_JD01.004 [Caenorhabditis angaria]
Length = 4291
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 123/270 (45%), Gaps = 46/270 (17%)
Query: 41 FALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDV 100
+ LKN + + R E KSGVL+V +DREE+ +Y L I +D K + A V V V
Sbjct: 3014 YRLKN--SFDERFLIEPKSGVLMVVKM-LDREEIGEYRLDIVVSDGKFEDSA--IVNVIV 3068
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVP 159
D+NDN P+F +KVY V + +S + + + V A D G+ V Y L P
Sbjct: 3069 ADQNDNPPIFERKVYSMKVMESES-----IGY-----ELVKVRADGGDSGESVTYSLK-P 3117
Query: 160 SNLVVIV---PQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FN 212
S + +V P +G L L + ++ E+ +EA D +P A ++ + N
Sbjct: 3118 SKMNKMVKLDPNSGILKLAEGLDFEKLQKIEIFIEAKDSGNPPLTAETKIEIEVMDENDN 3177
Query: 213 SPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETE 272
P+ ++ + S+ I K ++ + D E GRIV++++ +TE
Sbjct: 3178 VPIFKNTTYFATVLEHSKNGTEILK------------VEAEDKDSEHFGRIVYSIKNQTE 3225
Query: 273 REKFKIRDENPWITVDENGDVRVKKRWDFE 302
P++ + ++G + V D+E
Sbjct: 3226 I---------PFV-ISKDGVISVNGNLDYE 3245
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 26/221 (11%)
Query: 17 VASSHKHPHQLVRYSITQGNDNH--TFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
V S ++LV+ G+ T++LK P+ + SG+L + G +D E++
Sbjct: 3087 VMESESIGYELVKVRADGGDSGESVTYSLK-PSKMNKMVKLDPNSGILKLAEG-LDFEKL 3144
Query: 75 AQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHW 133
+ + I A D AET + ++V+DENDN P+F Y V + H
Sbjct: 3145 QKIEIFIEAKDSGNPPLTAETKIEIEVMDENDNVPIFKNTTYFATV----------LEHS 3194
Query: 134 KKFSSIGSVSATDADGD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE---YEL 187
K + I V A D D + ++ Y + + + ++ + G + + G+ + E Y L
Sbjct: 3195 KNGTEILKVEAEDKDSEHFGRIVYSIKNQTEIPFVISKDGVISVNGNLDYEIEEMRKYRL 3254
Query: 188 TVEAHD---LQSPSRYAREPAQVWLQFNSPVLQDEQLLQMI 225
+EA D L+S E + NSP+ +D + +I
Sbjct: 3255 KIEAKDGGGLKSEVDVDIEIEDI--NDNSPIFEDCNMTAVI 3293
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 89/208 (42%), Gaps = 47/208 (22%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
VR+SI + D+ F S E SG ++V S ++DRE +++ + I +
Sbjct: 2601 VRFSIAEAADSLPF------------SVERGSGKIVVKS-ELDRERKSEWRMAIK-VEAA 2646
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G + T VT+DV D NDN+P F R + + +S + +S+ SATD
Sbjct: 2647 GHVHSITTVTIDVADVNDNAPAFQGDYERLTISE-----DSPIG-----TSVAIFSATDR 2696
Query: 148 D-----GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDL------- 194
D + + L + V+ P++G L ++ + + +Y+L A D
Sbjct: 2697 DDSPSKSGTIRFSLVEEISQFVMNPESGWLTVSSSLDREKIGKYDLIARATDEGGLNTDL 2756
Query: 195 ----------QSPSRYAREPAQVWLQFN 212
SP ++++ +VW+ N
Sbjct: 2757 KFSVIVNDVNDSPPQFSKSKYEVWIDSN 2784
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 89/214 (41%), Gaps = 31/214 (14%)
Query: 77 YSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKF 136
Y + + A D G +A +T+ V+D ND PVF Y + L K+
Sbjct: 2436 YQIPLVAEDAVG-RRAFATLTLSVIDINDKPPVFVLSSYSCSMSALA----------KEG 2484
Query: 137 SSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDV--EYELTVEAHD 193
++ VSATD D GD + Y L S++ + P+ G + + D V + L V+A D
Sbjct: 2485 DTVLMVSATDDDEGDSIEYSLLDDSSVFSVHPKQGTVTV-AKKLEDKVGNSFSLIVKATD 2543
Query: 194 LQSPSRYAREPAQVWL-------------QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRV 240
+P +A ++ + + V +D + +I R + IE+ R
Sbjct: 2544 SANPPHHATTTVEIQVAKKDTPVPRFSNSHYLFSVSEDASIGSVIGRVQQVNQEIEEVRF 2603
Query: 241 TRAVRPTKRIDFSETDGEMEGRIVFALEKETERE 274
+ A + FS G G+IV E + ER+
Sbjct: 2604 SIA-EAADSLPFSVERG--SGKIVVKSELDRERK 2634
>gi|326671188|ref|XP_002663584.2| PREDICTED: protocadherin alpha-6-like [Danio rerio]
Length = 777
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 41/221 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+ +DRE+ LV+TA+D +++ T +V V++LD NDN+PVFS +Y+ V +
Sbjct: 174 LILRKALDREKEPVIRLVLTASDGGKPSRSGTLYVMVNILDINDNAPVFSSSIYKVRVTE 233
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV---PSNL--VVIVPQTGELL 173
+ + S I ++ATD D +V Y + NL I PQ+GE+
Sbjct: 234 ----------NTPRGSKIIKINATDVDEGSNGEVMYLFSSHGQEKNLDAFAINPQSGEIK 283
Query: 174 LTGDPPSDD-VEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
+ G+ +D YEL VEAHD S P + + L+++ID AP
Sbjct: 284 VKGNVDFEDKAFYELRVEAHDKSS------SPMKTSCKV---------LIEVIDVNDNAP 328
Query: 233 HRI------EKRRVTRAVRPTKRIDFSETDGEMEGRIVFAL 267
+ R +A + S+ D M G++ L
Sbjct: 329 EIVITSLLSSLREDVKAGTAVALVTVSDKDSGMNGKVSCKL 369
>gi|301781314|ref|XP_002926069.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3-like [Ailuropoda melanoleuca]
Length = 4091
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 504 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 562
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 563 KRY---VAQVREDV-------RPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDS 612
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 613 LTGEIQVVA--PLDFEAEREYALRIRAQDAGRP 643
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 76/279 (27%), Positives = 112/279 (40%), Gaps = 52/279 (18%)
Query: 42 ALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL 101
AL N + E+ S + SG L+ T +DRE + ++ L +TA D + V
Sbjct: 382 ALMNSRSLELF-SIDPLSG-LIRTEAALDRESMERHYLRVTAQDHGSPRLSPHPXXXXVA 439
Query: 102 DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLAV 158
D ND+SPVF Q YR +L NV ++ I + ATD D A Y+
Sbjct: 440 DRNDHSPVFEQAQYR-------ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFVG 489
Query: 159 PSNLVV-------IVPQTGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVWL 209
P I P++G + +G + +E YEL VEA D Q P P +
Sbjct: 490 PPAARAAASAAFEIDPRSGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSATV 544
Query: 210 QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGRI 263
+ + VL D AP EKR V + VRP R+ ++ D + G +
Sbjct: 545 RVHITVL---------DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLV 595
Query: 264 VFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ + R F I G+++V DFE
Sbjct: 596 HYNIISGNSRGHFAID--------SLTGEIQVVAPLDFE 626
Score = 43.1 bits (100), Expect = 0.17, Method: Composition-based stats.
Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 30/179 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 1093 ENSIVGSVVA--QITAVDPDEGPNAHIMYQIVEGNIPELFQM------------DIFSGE 1138
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIV 119
L D+D E +Y +V+ AT +++A HV + +D+NDNSPV + Q ++ V
Sbjct: 1139 LTALI-DLDYEARQEYVIVVQATSAPLVSRATVHVRL--VDQNDNSPVLNNFQILFNNYV 1195
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
+ + S V IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1196 SNRSDTFPSGV--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1246
Score = 42.7 bits (99), Expect = 0.23, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLK 123
SG +DRE V Y + A D GI A VTV VLD NDN P F+ K Y
Sbjct: 726 SGPLDRESVEHYFFGVEARD-HGIPPLSASASVTVTVLDVNDNRPEFTMKEYHL------ 778
Query: 124 SSLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPS 180
LN + + +++ SV+A D D + ++Y++ N I Q G L+T P
Sbjct: 779 -RLNEDAA---VGTTVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPL 834
Query: 181 D---DVEYELTVEAHD 193
D + ++L + A D
Sbjct: 835 DYKQERYFKLVLTASD 850
Score = 40.0 bits (92), Expect = 1.6, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 86/218 (39%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 996 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1043
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V Y L A D +G+ T V++ V D NDN+PVF + + V + NS V
Sbjct: 1044 AVPVYELTAYAVD-RGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1097
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1098 G-----SVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1152
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 1153 YVIVVQATSAPLVSRATVHVRLVDQNDNSPVLNNFQIL 1190
Score = 39.7 bits (91), Expect = 1.9, Method: Composition-based stats.
Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 580 LRVTATDRDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVVA-PLDFE 626
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y+L I A D ++ ++ V+D ND++P+F ++ V + + L +V
Sbjct: 627 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLE-NAPLGHSV 685
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKLA--VPSNLVVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L P VI TG + ++G + VE Y
Sbjct: 686 IH------IQAVDADHGENARLEYSLTGVAPDMPFVINSATGWVSVSGPLDRESVEHYFF 739
Query: 188 TVEAHDLQSP 197
VEA D P
Sbjct: 740 GVEARDHGIP 749
Score = 38.5 bits (88), Expect = 4.3, Method: Composition-based stats.
Identities = 49/164 (29%), Positives = 68/164 (41%), Gaps = 21/164 (12%)
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+D E+ Y+L ITA D KA+T +V V V D NDN+P F Y +V +
Sbjct: 934 LDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSE------ 987
Query: 128 SNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN---LVVIVPQTGELLLTGDPPSD 181
F+S+ +SATD D +V Y + I P +G + +
Sbjct: 988 ----DAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDRE 1043
Query: 182 DVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQL 221
V YELT A D P QV +Q N+PV E+
Sbjct: 1044 AVPVYELTAYAVDRGVPPLRTPVSIQVTVQDVNDNAPVFPAEEF 1087
Score = 38.1 bits (87), Expect = 5.3, Method: Composition-based stats.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ GT V + V + + + + Y IT GN + FA+ ++ GV
Sbjct: 782 EDAAVGTTV----VSVTAVDRDANSAISYQITGGNTRNRFAI------------STQGGV 825
Query: 62 LLVTSG-DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +D ++ + LV+TA+D + ++ +V +++ D N + PVF Y
Sbjct: 826 GLVTLALPLDYKQERYFKLVLTASD-RALHD-HCYVHINITDANTHRPVFQSAHY----- 878
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPP 179
S+N N S++ +SA+D D G+ + NL +T P
Sbjct: 879 ----SVNVNEDR-PVGSTVVVISASDDDVGENARITYLLEDNLPQFRINADSGAITLQAP 933
Query: 180 ---SDDVEYELTVEAHDLQSPSR 199
D V Y L + A D P +
Sbjct: 934 LDYEDQVTYTLAITARDNGIPQK 956
>gi|297295290|ref|XP_001090236.2| PREDICTED: protocadherin beta-16-like isoform 2 [Macaca mulatta]
Length = 796
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
++T G +DRE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 404 VLTEGALDRESWAEYNITITVTDLGTPRLKTEYNITVRVSDVNDNAPAFTQTSYNLFVRE 463
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 464 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGH 513
Query: 172 LLLTGDPPSDDV-EYELTVEAHDLQSPS 198
L + + E+E V A D P+
Sbjct: 514 LFALRSLDYEALQEFEFRVGAADRGFPA 541
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 28/173 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ + H F RN ++ K LV +DREE Q L +TA D
Sbjct: 171 YTISTNSYFHLFT---------RNHSDGKKYPELVLDQALDREEQPQLRLTLTALDGGSP 221
Query: 90 NKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ T HV + ++D NDN P F+Q++Y V + N+ + S + +VSA D D
Sbjct: 222 PRIGTSHVLIVIVDINDNVPEFTQRLYEVQVPE-----NAPIG-----SLVITVSARDLD 271
Query: 149 G---DKVAYKLAVPSNLVV----IVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
+++Y SN ++ I TGE+ L ++++ Y + VEA D
Sbjct: 272 AGTHGELSYSFFQYSNQIIQAFEINSITGEIRLKKALDFEEIQSYHMEVEASD 324
>gi|354500160|ref|XP_003512170.1| PREDICTED: protocadherin-3-like isoform 3 [Cricetulus griseus]
Length = 796
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ H +TV V D NDN+P F+Q Y V +
Sbjct: 402 LVTEGPLDRESRAEYNITITVTDLGTPRLTAQHTITVQVSDVNDNAPAFTQTSYTLFVQE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDKVAY 154
NS H IG++SATD+D A+
Sbjct: 462 ----NNSPALH------IGTISATDSDSGSNAH 484
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 22/133 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + +L +TA D ++ T V ++VLD NDN+P F Q +Y V +
Sbjct: 194 LVLDRALDREEQPELTLTLTAVDGGSPPRSGTTTVRIEVLDINDNAPQFVQSLYEVQVPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL---AVPSNLVVIVPQTGELLLT 175
NS V + + +VSA D D V Y L S VI TGE+ L
Sbjct: 254 -----NSPVD-----ALVLTVSAMDLDAGIHGNVVYSLFQGGGASQPFVIDGVTGEIRL- 302
Query: 176 GDPPSDDVEYELT 188
S +++E+T
Sbjct: 303 ----SKQLDFEVT 311
>gi|432961282|ref|XP_004086589.1| PREDICTED: protocadherin Fat 4-like [Oryzias latipes]
Length = 4971
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 116/265 (43%), Gaps = 55/265 (20%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
+V Y I +GN+ F + +S SG V LV G +D E + Y L I A D
Sbjct: 1220 VVHYHIAEGNEEAQFTI------------DSSSGQVTLV--GKLDYESSSSYLLKIIADD 1265
Query: 86 VKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
+ + +++ +LDENDNSP F KSSL+ +V + + SV+
Sbjct: 1266 AGDVPLSSSCMLSISILDENDNSPSFP-----------KSSLSVDVLENMRIGDLVVSVT 1314
Query: 144 ATDADGDK---VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
ATDAD + + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1315 ATDADSGQNADITYSITAINNHGTFSISPNTGSIFLV---KKLDYETQSFYKLNITAKDN 1371
Query: 195 QSPSRYAREPAQVWLQ-FNS--PVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRID 251
P+R + P V+++ FN PV + + I E V+ +V I
Sbjct: 1372 GRPARSSSIPVVVYVRDFNDNPPVFAPGDIFKSIP---------ENLPVSASVL---TIT 1419
Query: 252 FSETDGEMEGRIVFALEKETEREKF 276
+TD ++ G++ +++ ++ R +
Sbjct: 1420 AHDTDADINGQLEYSIVQQVPRGNY 1444
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 31/196 (15%)
Query: 22 KHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVI 81
K + L+ Y+IT GNDN F L SK+GVL + + +D EE Q+ L +
Sbjct: 3095 KEMNGLITYNITSGNDNGVFMLN------------SKTGVLSL-ANPLDFEEKQQHELRV 3141
Query: 82 TATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG 140
+A D I K VT+ V D NDN P+F Y ++ NV +++
Sbjct: 3142 SAIDGGWIAKTSYVSVTIQVTDVNDNPPIFDPDEYF-------PTVQENVPSG---TTVV 3191
Query: 141 SVSATDADGDK---VAYKL-AVPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDL 194
++ATD D +AY + + S+L VI P TG + G D + V Y LTV+A ++
Sbjct: 3192 RMNATDRDSGPNAVMAYVIQSSDSDLFVIDPNTGIITTQGFLDYEAKQV-YHLTVKAFNI 3250
Query: 195 QSPSRYAREPAQVWLQ 210
R + + L+
Sbjct: 3251 PDEDRCSFANVNIQLK 3266
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 47/82 (57%), Gaps = 13/82 (15%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+DREE Y L + ATD G++ + TH VTV V D DN PVFSQ+ Y F++ +
Sbjct: 728 LDREEKTAYQLQVRATDGGGLS-SHTHAFVTVTVTDTQDNPPVFSQENYSFVMFE----- 781
Query: 127 NSNVSHWKKFSSIGSVSATDAD 148
NVS + IG+VSAT D
Sbjct: 782 --NVSPG---TVIGTVSATTVD 798
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%), Gaps = 3/51 (5%)
Query: 67 GDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVY 115
G++DREE++ Y++ + ATD KG+ + VT+ VLD NDN+P FSQ +Y
Sbjct: 2089 GELDREELSNYTVTVVATD-KGVPPLSSSMDVTMIVLDVNDNTPSFSQNIY 2138
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 29/171 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y+I GN ++ F++ T EIR T+ +DRE+VA YSL + ATD
Sbjct: 2680 LEYAIIDGNKDNIFSIHR-ATGEIR------------TNRPLDREKVALYSLKVKATDRG 2726
Query: 88 GINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
K+ + V V VLD NDN+P FS K++ V + N+ V + ++ V+ TD
Sbjct: 2727 SPPKSTSVKVLVRVLDVNDNAPRFS-KIFSATVAE-----NAPVGY-----TVTRVTTTD 2775
Query: 147 ADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
D A Y L I P TG++ + ++ + Y + V AHD
Sbjct: 2776 EDAGSNAISRYSLTDSGLPFSINPNTGDITINRPLNREETDHYIVKVSAHD 2826
Score = 44.7 bits (104), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 18/116 (15%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN +GT V + + + + + +R+SI+ GN N F + +S +GV
Sbjct: 2144 ENILTGTDV--IQVFASDADDGSNGQIRFSISSGNTNSDFRI------------DSVTGV 2189
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDV--LDENDNSPVFSQKVY 115
+ V +DRE + YSLV+ A D +G + H TV++ LD ND SP+F Y
Sbjct: 2190 ISVAK-RLDRETRSAYSLVVQAAD-RGSSPRVDHATVNIVLLDVNDCSPLFELSPY 2243
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 82/190 (43%), Gaps = 31/190 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVL-LVTSGDIDREEVAQYSLVITATDVKG 88
Y I +GN+ F L +I + + L LV++G +DRE Y L+I D KG
Sbjct: 159 YRIVEGNEQRKFRL------DITVNPSGEGAFLHLVSTGGLDRELTPFYQLLIEVED-KG 211
Query: 89 INK--AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+ K V V + D NDN PVF Q Y +S SSI ++A+D
Sbjct: 212 VPKKFGYLQVNVTIQDINDNPPVFEQDQYH----------SSVFEDAAVGSSILQITASD 261
Query: 147 AD---GDKVAYKL--AVPSNLVVIVPQTGELLL--TGDPPSDDVEYELTVEAHDLQSPSR 199
D ++ Y L P I P+TG +++ + D S EY LT+ A D PS
Sbjct: 262 QDEGANAEIRYILDEGTPFQ---IDPKTGTIVIKESLDFESKK-EYSLTIHAADKGVPSL 317
Query: 200 YAREPAQVWL 209
R + L
Sbjct: 318 SGRTETTIKL 327
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 16/109 (14%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G K + + + + P+ LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1735 GFKIMQLTAKDADEGPNALVTYTIISGADD-SFRI------------DPESGDLIATK-K 1780
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G ++ + + V D ND++P FS+ Y F
Sbjct: 1781 LDRERRSKYSLLVRADD--GKQSSDMRLNITVKDVNDHTPKFSRPTYSF 1827
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 30/178 (16%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD---VKGIN 90
QG D + L + S K+G + VT G +DRE+ + SL + A + ++G +
Sbjct: 3304 QGEDGVVYYLIFGKSRNKGFSINKKTGQIYVT-GMLDREKEEKISLKVLAKNAGSIRGAD 3362
Query: 91 KAETHVTVDVLDENDNSPVFSQKVYRFIV------GDL----KSSLNSNVSHWKKFSSIG 140
E V + +LD ND PVF+Q +Y V GDL K+ + +V W +FS
Sbjct: 3363 IDEVFVNITILDAND-PPVFTQDLYDVQVSEGLSPGDLVTFVKADDSDSVPSWSRFSYFI 3421
Query: 141 SVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSP 197
T N+ I P+TG++ + + + Y LTV A D +P
Sbjct: 3422 DPELT--------------KNMFTINPKTGQVSVAAELDRETTPVYNLTVLAVDTGTP 3465
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 78/216 (36%), Gaps = 47/216 (21%)
Query: 19 SSHKHPHQLVRYSITQGN------DNHTFALKNPTTHEIRNSTESKSGV-------LLVT 65
SSH H V + TQ N +N++F + + T S + V L+T
Sbjct: 749 SSHTHAFVTVTVTDTQDNPPVFSQENYSFVMFENVSPGTVIGTVSATTVDLNSNISYLIT 808
Query: 66 SGD------------------IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNS 107
SGD IDREE Y L + A G E V + V D NDN+
Sbjct: 809 SGDQRGLFAVNGAGQITASSLIDREEKGFYQLKVVAR--AGEITGEAFVNITVRDLNDNA 866
Query: 108 PVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV-PSNLV 163
P F S V +W I A+D D V Y L P L
Sbjct: 867 PRFLHAAEHV----------SAVENWSTGHIIFQAKASDPDEGLNGVVVYSLKENPKGLF 916
Query: 164 VIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSR 199
I + G + LTG + YE+ V A D+ P R
Sbjct: 917 HIHEKHGLITLTGSLKASTNSYEVEVTASDMGVPQR 952
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQK 113
T S +G L VT +DRE A+Y+L+ITATD + T VTV V D NDN PVFS
Sbjct: 2288 TLSSAGQLSVTK-TLDREFGAEYTLLITATDSGSPALSGTGTVTVLVDDVNDNVPVFSSS 2346
Query: 114 VYRFIVGD 121
+ + +
Sbjct: 2347 TFHTTIAE 2354
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 63 LVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKVY 115
+++S +DREE A Y L++ ATD KG++ + T V+V V D NDN P F Y
Sbjct: 2394 IISSALLDREERANYQLLVVATDGGQPKGLSSSAT-VSVTVADINDNPPRFHHHPY 2448
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 71/157 (45%), Gaps = 28/157 (17%)
Query: 2 ENSKSGTGVKGLPILVASSHKHP--HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKS 59
EN++ GT V +L S P + + SI GN+ F E+ ST
Sbjct: 353 ENAQIGTVVA---LLTVSDSDSPSANGNISVSILGGNEQRHF--------EVHKSTVPNL 401
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH---VTVDVLDENDNSPVFSQKVYR 116
++ V S +DRE ++ Y+L ++ +D G A + + + V D ND+ P+F +++YR
Sbjct: 402 SLIKVASL-LDRERISSYNLTVSVSD-NGRPMARSSFASLVIFVNDINDHPPIFQEELYR 459
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA 153
+ + K S I VSATD D + A
Sbjct: 460 VDISE----------DIPKGSYIKGVSATDGDSGQNA 486
>gi|354500158|ref|XP_003512169.1| PREDICTED: protocadherin-3-like isoform 2 [Cricetulus griseus]
Length = 796
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ H +TV V D NDN+P F+Q Y V +
Sbjct: 402 LVTEGPLDRESRAEYNITITVTDLGTPRLTAQHTITVQVSDVNDNAPAFTQTSYTLFVQE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDKVAY 154
NS H IG++SATD+D A+
Sbjct: 462 ----NNSPALH------IGTISATDSDSGSNAH 484
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 22/133 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + +L +TA D ++ T V ++VLD NDN+P F Q +Y V +
Sbjct: 194 LVLDRALDREEQPELTLTLTAVDGGSPPRSGTTTVRIEVLDINDNAPQFVQSLYEVQVPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL---AVPSNLVVIVPQTGELLLT 175
NS V + + +VSA D D V Y L S VI TGE+ L
Sbjct: 254 -----NSPVD-----ALVLTVSAMDLDAGIHGNVVYSLFQGGGASQPFVIDGVTGEIRL- 302
Query: 176 GDPPSDDVEYELT 188
S +++E+T
Sbjct: 303 ----SKQLDFEVT 311
>gi|291387494|ref|XP_002710307.1| PREDICTED: protocadherin beta 14 [Oryctolagus cuniculus]
Length = 809
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 75/159 (47%), Gaps = 23/159 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT G +DRE A+Y++ IT +D+ G + T HV V V D NDN+P FSQ Y +V
Sbjct: 403 LVTDGALDREARAEYNITITVSDL-GTPRLTTRHHVAVQVSDVNDNAPAFSQAAYTLLVR 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP------SNLVVIVPQTGE 171
+ S IGSVSA+D D +V Y L P + LV + +G+
Sbjct: 462 ENNS----------PGLLIGSVSASDRDAGANAQVTYSLLPPPQQPDVAALVSVHADSGQ 511
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL 209
L + + +E V A D SP+ + +V L
Sbjct: 512 LYALRALDYEALRAFEFGVRAADRGSPALSSEARVRVQL 550
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 75/161 (46%), Gaps = 22/161 (13%)
Query: 45 NPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDV 100
+P +H IR+S + K LV +D EE + L +TA D T V + V
Sbjct: 173 SPNSHFYINIRDSGDGKIYPELVLHRALDHEEEPELKLTLTAVDGGAPPLSGTTLVLIKV 232
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLA 157
LD NDNSP F++ +Y V + +++V S I ++SA D D K++Y L
Sbjct: 233 LDINDNSPEFAENLYEVQVPE-----DTDVG-----SRIITLSAKDIDAGSFGKISYTLF 282
Query: 158 VPSNLVV----IVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
S V I P TGE+ L + ++ Y +T +A D
Sbjct: 283 HASEDVRKTFEINPVTGEVGLKSHLDFEVIQSYTITTQATD 323
>gi|119514198|gb|ABL75861.1| protocadherin 2A21 [Takifugu rubripes]
Length = 938
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 20/145 (13%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+LV +DRE +SLV+TA D K E ++ ++VLD NDN+PVFS+ VY ++
Sbjct: 194 ILVVQKSLDRETAGSHSLVLTALDGGKPPKSGEMNILINVLDNNDNAPVFSKDVYSVMLH 253
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSN-----LVVIVPQTGEL 172
+ NS + +++ V+ATDAD +V Y + N L I TGE+
Sbjct: 254 E-----NSPIG-----TTVIQVNATDADDGPNGEVVYSFSNSMNQNVLDLFDINEITGEI 303
Query: 173 LLTGDPPSDDVE-YELTVEAHDLQS 196
+ G ++ E YE+ VEA D S
Sbjct: 304 TVKGPIDYEENERYEIEVEASDKAS 328
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE+ +Y L ITA D + +E +TV V D NDN P FS Y F + +
Sbjct: 409 LVTKSALDREQRDKYDLTITAKDAGQPSLSSEKTITVVVSDVNDNRPEFSLSPYTFYISE 468
>gi|444713186|gb|ELW54094.1| Protocadherin beta-14 [Tupaia chinensis]
Length = 565
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 37/204 (18%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYR 116
K+ +VT +DRE A+Y++ IT TD+ H +TV V D NDN+P F+Q Y
Sbjct: 245 KNFFTVVTGKALDRESQAEYNITITVTDLGTPRLTTEHSITVLVSDVNDNAPAFTQASYT 304
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIV 166
+V + NS H IG++SATDAD +V Y L P ++LV I
Sbjct: 305 LLVRE----NNSPALH------IGTISATDADAGTNAQVTYSLLPPHDPQLALASLVSIN 354
Query: 167 PQTGELLLTGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQD 218
G+L S D E +E V A D SP+ ++ +V + N+P VL
Sbjct: 355 ADNGQLFALR---SLDYEALRAFEFGVRAADRGSPALSSQALVRVLVLDANDNAPFVLYP 411
Query: 219 EQ-----LLQMIDRKSEAPHRIEK 237
Q +++ R +EA + + K
Sbjct: 412 LQNGSAPCTELVPRAAEAGYLVTK 435
>gi|405977655|gb|EKC42094.1| Protein dachsous [Crassostrea gigas]
Length = 2755
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 111/259 (42%), Gaps = 43/259 (16%)
Query: 57 SKSGVLLVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVY 115
S SG + + +++REE +Y+L + A D KG + VT++VLD ND+SPVF Q Y
Sbjct: 489 SSSGFIYIKQ-ELNREEKDKYTLTVVARDSGKGYRSSSVPVTINVLDANDHSPVFKQSFY 547
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGEL 172
F + + + + +G +ATD D + A Y+ P + I TG +
Sbjct: 548 TFYI----------LENMAAGTIVGQTTATDKDTGENAYLRYQFEQPEPHLKIDSDTGVI 597
Query: 173 LLTGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMI 225
T S D E Y LTV A D P ++ +++ L NSP + Q ++
Sbjct: 598 TTT---VSLDREEKNFYNLTVVASDHGDPKKFDYTNVKIFVGDLNDNSPKFLNSQPIEAT 654
Query: 226 DRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEM--EGRIVFALEKETE---REKFKIRD 280
++E + T ++ S D + G I ++L E + + F I
Sbjct: 655 VNENEP-------------KGTSVLNISAKDDDALENGTISYSLIAEGDVNVLKYFAIHP 701
Query: 281 ENPWITVDENGDVRVKKRW 299
+ +T E D K R+
Sbjct: 702 KTGLVTTLEVLDFEQKNRY 720
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 102/231 (44%), Gaps = 31/231 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D E Y++ ++ D K + A+T + V+V DENDN PVFSQ+ Y+ D+ S
Sbjct: 1771 LDHEVRKHYAVGLSVNDTK--HSAQTILEVNVEDENDNHPVFSQQSYQ---ADIPEFTGS 1825
Query: 129 NVSHWKKFSSIGSVSATDADG---DKVAYKLAV-PSNLVVIVPQTGELLL--TGDPPSDD 182
V I +V+ATDAD + Y L V P+ I P TGEL T + D
Sbjct: 1826 GV-------KILTVTATDADSGINSVLTYNLIVNPTGGFYIDPNTGELFTNKTVELRQDQ 1878
Query: 183 VEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTR 242
L V A D P R A V + Q++ + E P + K
Sbjct: 1879 QVITLVVTAQDGGRP----RLSAVVAINL--------QVIPVNHYAPEFPPQQSKFIFAE 1926
Query: 243 AVRPTKRI-DFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGD 292
++ + + + TD +M+ I ++++ + F I ++ + ++EN D
Sbjct: 1927 DIKKGENLWSVTATDRDMKQEIYYSIKAGNQHNTFGIDRQSGLVFLNENLD 1977
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 87/186 (46%), Gaps = 30/186 (16%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
++ YS+ G+ ++TF L N T+ EI LL + +D E+V Y L I A D
Sbjct: 370 VILYSMA-GDSSNTFKL-NSTSGEI---------TLLRS---LDYEQVQLYKLYIEARDQ 415
Query: 87 KGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKF-SSIGSVSA 144
+ T +T+ VL+ NDNSPVFS Y F NVS S+I V A
Sbjct: 416 GNPPRTSTLSLTISVLNVNDNSPVFSASSYVF-----------NVSESALVQSNIDQVQA 464
Query: 145 TDADGDKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYA 201
TD DGD V+Y ++ NL I +G + + + ++ + Y LTV A D R +
Sbjct: 465 TDRDGDHVSYSFRDSMYLNLFGIGSSSGFIYIKQELNREEKDKYTLTVVARDSGKGYRSS 524
Query: 202 REPAQV 207
P +
Sbjct: 525 SVPVTI 530
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 83/177 (46%), Gaps = 26/177 (14%)
Query: 17 VASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQ 76
V ++ + Q + YSI GN ++TF + + +SG++ + ++DRE V
Sbjct: 1937 VTATDRDMKQEIYYSIKAGNQHNTFGI------------DRQSGLVFLNE-NLDRELVPT 1983
Query: 77 YSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK 135
YSL+I A+D K T V+V+V D ND PVF +Y L N +H
Sbjct: 1984 YSLIIEASDNGNPFKTNTLVVSVEVRDVNDQRPVFQPTMYF-------KELPENTAHSNS 2036
Query: 136 FSSIGSVSATDADGDKVAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVEYELTVE 190
F + + + ++ Y + ++ L ++ +TG + +T P+ ++YE T +
Sbjct: 2037 FLQVHATDDDEGVNAEIQYTITSGNDQGLFIVHGRTGAVSIT---PNATLDYETTTQ 2090
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 32/183 (17%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
++ +SI GN+ FA+ +S LL +DRE ++L I D
Sbjct: 1008 VLAFSIVDGNEEGHFAID-------------RSSGLLSIQTTLDRETTPSFTLTIQVRD- 1053
Query: 87 KGI--NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+G+ A +++ VLD ND++P+FSQ Y D++ +L S++ V A
Sbjct: 1054 QGMPQRSAIKLISIHVLDINDHAPLFSQSSYTV---DIQENLPPQ-------SNVLQVQA 1103
Query: 145 TDAD---GDKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD-DVEYELTVEAHDLQSPS 198
TD D K++Y L V + V+ TG+L T + Y LT D P
Sbjct: 1104 TDLDIGVNGKLSYYLPPGVGGDKFVLDSTTGQLSTTASLDREAQASYTLTAYVRDFGYPE 1163
Query: 199 RYA 201
RY+
Sbjct: 1164 RYS 1166
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 123/316 (38%), Gaps = 59/316 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVT-SGDIDREEVAQYSLVITATDV 86
++Y+IT GND F + ++G + +T + +D E Q+ L++ ATD
Sbjct: 2053 IQYTITSGNDQGLFIV------------HGRTGAVSITPNATLDYETTTQHKLIVRATDC 2100
Query: 87 KGINKAETH------VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG 140
G N + + ++V D N+ PVF Y +S+N + K F +
Sbjct: 2101 LGCNSTQIRFSAFATIVINVTDVNEYPPVFPVPFYY-------ASVNEGPTGTKVFQA-- 2151
Query: 141 SVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRY 200
A D DG N VV D + V + + +L Y
Sbjct: 2152 --HANDKDGGPYGVLSYQIKNTVV---------FKIDSVTGWVSTNMNINYENLP----Y 2196
Query: 201 AREPAQVWLQFNSPV-----LQDEQ--LLQMIDRKSEAPHRIEKRRV------TRAVRPT 247
+P Q +F+ V L+D + ++ + D AP +K+ +
Sbjct: 2197 LSDPGQNQYRFDLTVTDPMGLEDTKPVIVTINDVDEFAPVFTQKKYAFEVPGNAKQGHAI 2256
Query: 248 KRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEELGPE 307
++ ++ DG + G + + ++ + I +++ D + ++R K+ ++ +
Sbjct: 2257 GKVSATDQDGGLAGMVFYVIKNPVDYFDVNITTGEVYVSHDFHSEIRSKRESTRQKRALD 2316
Query: 308 KTIDFWVTINNQATNG 323
K +VT+ ATNG
Sbjct: 2317 KN---FVTLIITATNG 2329
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 106/268 (39%), Gaps = 52/268 (19%)
Query: 28 VRYSITQGNDNHTFALK--NPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
V YSI GN FA+ N + IRN +D EE + +SL + A D
Sbjct: 789 VSYSIIGGNVFDVFAVNVSNGNIYCIRN---------------VDYEEASSHSLAVKAVD 833
Query: 86 VKGIN-KAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
N K+ T +V V+V+D NDN PVF + L S + ++ + +
Sbjct: 834 NSPYNPKSSTINVIVEVVDVNDNPPVFEK----------DPVLISRKENLPTGYTVHTFT 883
Query: 144 ATDAD-GDKVAYKLAVPSN-----LVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQS 196
ATD D G + + ++ S L I P +G+L + ++V + L ++A D
Sbjct: 884 ATDKDSGVNGSVRYSIQSQTPDRALFTIDPISGDLKVASVLDYEEVKQVSLVIQAKDQCH 943
Query: 197 PSRYAREPAQVWLQF-----NSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRID 251
+ WL N+PV + + + ++ P + A +D
Sbjct: 944 AGCQQKATITAWLSVLDVNDNTPVFKGNSSYSVFENETVGPQGFPVTHII-ATDADSNVD 1002
Query: 252 --------FSETDGEMEGRIVFALEKET 271
FS DG EG FA+++ +
Sbjct: 1003 ESGNGVLAFSIVDGNEEGH--FAIDRSS 1028
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 48/114 (42%), Gaps = 16/114 (14%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V + S P + YS+ ND F+L + +G
Sbjct: 1511 ENPSRGTPVTTVRATFVGSGSGP---ITYSLVNSNDQQVFSLG------------ASTGT 1555
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
+ + +G EVAQ V+ G++ T + V + D NDN+P F+Q VY
Sbjct: 1556 ITINNGATLDFEVAQEVHVMVVATSGGLS-TYTRLVVQLTDINDNAPKFAQNVY 1608
>gi|354500173|ref|XP_003512175.1| PREDICTED: protocadherin-3-like [Cricetulus griseus]
Length = 508
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ H +TV V D NDN+P F+Q Y V +
Sbjct: 402 LVTEGPLDRESRAEYNITITVTDLGTPRLTAQHTITVQVSDVNDNAPAFTQTSYTLFVQE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDKVAY 154
NS H IG++SATD+D A+
Sbjct: 462 ----NNSPALH------IGTISATDSDSGSNAH 484
>gi|268575352|ref|XP_002642655.1| C. briggsae CBR-CDH-3 protein [Caenorhabditis briggsae]
Length = 3207
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 88/190 (46%), Gaps = 34/190 (17%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT-- 84
+VRYSI H E SG+L T+ +DRE+ ++ + + AT
Sbjct: 1941 VVRYSIVSKCKEHL-------------EIEPVSGIL-KTTASLDREKFSECPVFVIATSF 1986
Query: 85 -DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D K + +A T + + VLD NDNSP FSQ+VY+F NV+ + IG V
Sbjct: 1987 VDNKPL-QAITKILIKVLDINDNSPRFSQQVYKF-----------NVTENSGPTFIGHVI 2034
Query: 144 ATDAD-GDKVAYKLAVPS-NLVVIVPQTGELLLTGDPPSDD-VEYELTVEAHDLQSPSRY 200
A DAD G ++ Y++ N ++ G++ D + EY L +EA D P R
Sbjct: 2035 ARDADSGSRIFYEIVSGDPNHEFVISDNGQIDSIRDLDRESKSEYRLILEAFDDGKPRR- 2093
Query: 201 AREPAQVWLQ 210
RE V ++
Sbjct: 2094 -RENTTVLIR 2102
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 15/118 (12%)
Query: 53 NSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQ 112
N T S +L T+ +D E + Y L I A+ G +E HV +D++DEND P
Sbjct: 1587 NFTISPFDGVLYTNSPLDFETITSYILTIEASTSSG-TSSECHVIIDIIDENDEVP---- 1641
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSS----IGSVSATDADGDKVAYKLAVPSNLVVIV 166
RFI GDL +N V +K +S IGS A D D + V + N + V
Sbjct: 1642 ---RFITGDL---VNLWVREEQKEASYPLIIGSSIAEDLDENSVVTYSILSGNTSLFV 1693
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 65/145 (44%), Gaps = 23/145 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
E ++G + V + ++ E+ Y + + TD G ET + +++ D NDN P+F + Y
Sbjct: 2161 EQETGRVFV-NDTLNFEKKTSYRIKVRLTD--GAWLIETSLFINIKDVNDNFPIFEKSEY 2217
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGEL 172
F+ K S IG + ATD D K+ Y L P I P +G L
Sbjct: 2218 IFV-------------SQKNSSEIGKLHATDLDSGPNGKITYSLTSP--FFRIHPDSG-L 2261
Query: 173 LLTGDPPSDDVEYELTVEAHDLQSP 197
L P SDDV L V A D +P
Sbjct: 2262 LTKLRPLSDDVTI-LEVVAMDHGTP 2285
>gi|444713179|gb|ELW54087.1| Protocadherin beta-17 [Tupaia chinensis]
Length = 718
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 93/199 (46%), Gaps = 37/199 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT TD+ H +T+ V D NDN+P F+Q Y +V +
Sbjct: 403 LVTERPLDRESQAEYNITITVTDLGTPRLTTEHSITLLVSDVNDNAPAFTQASYTLLVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IG++SATDAD +V Y L P ++LV I G+
Sbjct: 463 ----NNSPALH------IGTISATDADAGTNAQVTYSLLPPHDPQLALASLVSINADNGQ 512
Query: 172 LLLTGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ--- 220
L S D E +E V A D SP+ ++ +V + N+P VL Q
Sbjct: 513 LFALR---SLDYEALRAFEFGVRAADRGSPALSSQALVRVLVLDANDNAPFVLYPLQNGS 569
Query: 221 --LLQMIDRKSEAPHRIEK 237
+++ R +EA + + K
Sbjct: 570 APCTELVPRAAEAGYLVTK 588
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%), Gaps = 26/195 (13%)
Query: 15 ILVASSHKHPHQLVRYSITQ-----GNDNHTFALKNPTTHEI--RNSTESKSGVLLVTSG 67
+L S HP L I + N ++ + N + + RN ++ + LV
Sbjct: 139 LLKISESSHPGTLFPLKIAEDLDVGSNTVQSYTISNNSHFHLFTRNHSDGRKYPELVLDK 198
Query: 68 DIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+DRE+ + L +TA D + T V + VLD NDN P F+Q +Y+ V +
Sbjct: 199 ALDREKQPELRLTLTAQDGGSPPRTGTSQVLIVVLDINDNVPEFAQLLYKVQVPE----- 253
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVV----IVPQTGELLLTGDPP 179
+S + + + +VSA D+D ++AY PSN V+ I +TGE+ L
Sbjct: 254 DSLIGSF-----VITVSARDSDAGTNGEIAYTFFQPSNQVIQTFEINTETGEIRLKKLLD 308
Query: 180 SDDVE-YELTVEAHD 193
++++ Y + +EA D
Sbjct: 309 FEEIQSYRMEIEASD 323
>gi|291225882|ref|XP_002732927.1| PREDICTED: fat-like, partial [Saccoglossus kowalevskii]
Length = 4229
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 54/80 (67%), Gaps = 5/80 (6%)
Query: 37 DNHTFALKNPTTHEIRNSTESKSGVLLVT-SGDIDREEVAQYSLVITATDVKGINKAETH 95
DN +++L + + S +S +G++ V+ +G +DREE+ +++LV+ ATD G+ A +
Sbjct: 251 DNLSYSLNDTVNNAF--SMDSNTGLITVSGTGILDREELDRHTLVVLATD--GVYIATST 306
Query: 96 VTVDVLDENDNSPVFSQKVY 115
VTV +LDENDNSP F + VY
Sbjct: 307 VTVAILDENDNSPKFEKSVY 326
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 76/165 (46%), Gaps = 36/165 (21%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS+ GT P+ + H ++ Y I T+ + E+ +
Sbjct: 764 ENSRQGT-----PVGKVEATDPDHDILSYFII-------------TSASLFTVDENSGQI 805
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+++ SG +DRE Y++V+ ATD G+ T++T+ +LDENDNSP+F
Sbjct: 806 IVLVSGSLDREVQDSYNVVVIATD--GVYSTSTNITIAILDENDNSPIF----------- 852
Query: 122 LKSSLNSNVSHWKKFSS-IGSVSATDAD-GD--KVAYK-LAVPSN 161
+KS NV+ S I VSA D D GD V Y LA SN
Sbjct: 853 MKSGYYGNVTEDVDIGSEILQVSAQDEDVGDNANVEYSILATSSN 897
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 113/264 (42%), Gaps = 44/264 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN + F + N S +G L +RE+ YSL I A D +
Sbjct: 2742 IIYSIFAGNQDGIFVID-------ENGQISTNGTL-------NREDQDVYSLTIAAMDDR 2787
Query: 88 GINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+ V V++LD NDN PV S DL +S++ NV + +V +D
Sbjct: 2788 TSPRLGLVEVIVNILDVNDNDPVISSS-------DLTASISENVETGTQLLMTPTVFVSD 2840
Query: 147 AD----GDKVAYKL----AVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSP 197
AD GD V +L + +LV+ T + + GD ++ E Y+L + A D SP
Sbjct: 2841 ADIAGNGD-VTLRLEGAGSSDFSLVLNTDNTVTISVDGDIDRENKEMYDLLLIAEDGGSP 2899
Query: 198 SRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSE 254
SR +V + NSPV + + I EK+ A+ + I +
Sbjct: 2900 SRSTNSTLKVNVLDINDNSPVFNETRYTATIS---------EKQPSQTALNMNQPITVYD 2950
Query: 255 TDGEMEGRIVFALEKETEREKFKI 278
D I++A+E + ++KF+I
Sbjct: 2951 IDDSPYNFIIYAVESGSNQDKFRI 2974
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 121/278 (43%), Gaps = 28/278 (10%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTS-GDIDREEVAQYSLVITATDVKGINKAET 94
N+ TF+L++ + + SGV+ +T G +D + Y+L + A D G+N +
Sbjct: 2632 NNTITFSLQSDGNTNGAFTIDEMSGVVTLTGDGILDVRDNDFYNLTVEADD--GLNTNQA 2689
Query: 95 HVTVDVLDENDNSPVFSQK---VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK 151
+ + VL+ N +PVF+Q VY D +L ++GSV ATD DGD
Sbjct: 2690 TILITVLEINLYNPVFNQSLGYVYSINENDYPGAL--------SVVTVGSVWATDDDGDA 2741
Query: 152 VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL 209
+ Y + A + + ++ + G++ G +D + Y LT+ A D ++ R V +
Sbjct: 2742 IIYSIFAGNQDGIFVIDENGQISTNGTLNREDQDVYSLTIAAMDDRTSPRLGLVEVIVNI 2801
Query: 210 ---QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFA 266
N PV+ L I E ++ + PT + S+ D G +
Sbjct: 2802 LDVNDNDPVISSSDLTASISENVETGTQL-------LMTPTVFV--SDADIAGNGDVTLR 2852
Query: 267 LEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEEL 304
LE + + + + +T+ +GD+ + + ++ L
Sbjct: 2853 LEGAGSSDFSLVLNTDNTVTISVDGDIDRENKEMYDLL 2890
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
S + +GV+ V S +DRE V Y++V+ TD G+ A + T+ +LDENDNSP+F +
Sbjct: 1344 SIDEDTGVIKVISS-LDRENVDSYNVVVMVTD--GVYSASANATIAILDENDNSPIFMKS 1400
Query: 114 VY 115
Y
Sbjct: 1401 TY 1402
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 63 LVTSGDIDRE---EVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
++ GDIDR+ ++L +T +D + T V + + D NDNSPVFSQ+ YRF
Sbjct: 597 IIVIGDIDRDPPNNNVFFNLTVTVSDGDSNTDNDTTSVIIAISDVNDNSPVFSQETYRFT 656
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELLL 174
+ +S+G V+ATD D G+ V+Y + I +GE+ +
Sbjct: 657 ADE----------GVAVATSVGMVTATDKDEGTNGEVVSYAIMDGDGTFGIDETSGEISV 706
Query: 175 --TGDPPSDDVEYELTVEAHDLQSPSR 199
+ D + D E+ TV AHD P +
Sbjct: 707 NRSLDFENGDKEFRFTVVAHDGGLPQQ 733
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 92/201 (45%), Gaps = 30/201 (14%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
I V + P ++ YSIT +D+ F + N T EI TS +DRE
Sbjct: 2202 IQVIAVDADPDSVLLYSIT--DDSLPFTINN-VTGEIS------------TSDTLDRETT 2246
Query: 75 AQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWK 134
+ L ++ +D G+ + T + V VLD NDN P F + Y+ + ++ +
Sbjct: 2247 ESWLLNVSCSD--GLYEDYTIINVTVLDVNDNEPEFLEGEYKKTISEI----------FP 2294
Query: 135 KFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDD--VEYELTVEA 191
+ I +VSATDAD +++ Y L ++ + QTG + L D +++ +V+A
Sbjct: 2295 VGNVILTVSATDADEMNEMVYFLEDSNSKFAVNYQTGAITLQQIITGFDFGIQHTFSVKA 2354
Query: 192 HDLQSPSRYAREPAQVWLQFN 212
D SP + + + + FN
Sbjct: 2355 RDSGSPPKESSVQVTILINFN 2375
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 19/112 (16%)
Query: 66 SGDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLK 123
SGD+ Q++ V++A D G+ N + + +L+END +PVF+ Y F + L+
Sbjct: 1938 SGDV------QFTYVVSAVD-GGLPNNTGTVSLIITILNENDETPVFNSDSYSFTI--LE 1988
Query: 124 SSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLT 175
+++ F +G V ATDADGD + Y + VI +TG+++++
Sbjct: 1989 NAV------IDTF--VGRVMATDADGDTIIYTVNPTDVPFVIDSETGDIIVS 2032
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 74/162 (45%), Gaps = 39/162 (24%)
Query: 2 ENSKSGTGVKGLPILVASSHK------HPHQLVRYSITQGNDNHTFALKNPTTHEIRNST 55
ENS GT +V S H +++ Y I G+D TF++ N
Sbjct: 1208 ENSTVGT-------IVGSVHATDIDDGSNGEILSYDIINGDD--TFSMNN---------- 1248
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQKV 114
++G L++TS +D ++++L ++A D I K T + V + D N+N PVF
Sbjct: 1249 --QTGNLMLTSV-LDPSLNSKFTLTVSAMDGGSIPKTGSTVIIVTITDVNNNIPVFLSSN 1305
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKL 156
Y F V + + +S+G VSA D+D D ++Y +
Sbjct: 1306 YSFTV----------YENSRSDTSVGKVSAMDSDDDVLSYFI 1337
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 47/92 (51%), Gaps = 16/92 (17%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE +Y + I+ TD K N ++TV + D NDNSP F +Y F
Sbjct: 1567 LDRESHDKYVVTISVTDGKFSNNV--NLTVYIEDTNDNSPQFDISLYIF----------- 1613
Query: 129 NVSHWKKFSSIGSVSATDAD---GDKVAYKLA 157
N+S +++G+V ATDAD D V Y ++
Sbjct: 1614 NISEGINGTNVGTVHATDADLSPNDDVMYYIS 1645
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 23/92 (25%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ + YSIT GND + F + P T E L T+ ++DREE Y+L +TAT
Sbjct: 3542 NAYIEYSITGGNDGNEFTII-PETGE------------LFTNVELDREENGMYTLTVTAT 3588
Query: 85 DVKGINKAETH------VTVDVLDENDNSPVF 110
+ +KA H +T+ V D NDN+P F
Sbjct: 3589 N----SKAAPHFMDAITMTISVDDVNDNAPEF 3616
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 13/119 (10%)
Query: 8 TGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSG 67
TG L ++ + + V +SI GN + F + + V L S
Sbjct: 2091 TGFTILQVVALDEDEGMNSNVTFSIITGNHGNAFGIMD------------DGSVFLANSS 2138
Query: 68 DIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
ID QYSL + ATD ++ T V +++LD N+N PVF Y V + +S+
Sbjct: 2139 VIDIANYVQYSLTVQATDGGEFPRSSITMVIINILDVNNNPPVFQSDFYTVDVSEEQSA 2197
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 84/193 (43%), Gaps = 35/193 (18%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF--------IVG 120
+DRE Y + ++ D GI+ +VT+ V D NDNSPVF Y F +V
Sbjct: 1021 LDREMQDMYEVQLSVND--GIHSTSVNVTIYVEDNNDNSPVFEFNSYNFNISEGFTGLVV 1078
Query: 121 DLKSSLNSNVSHWKKF-------------SSIGSVSATDADGDKVAYKLAVPSN----LV 163
+ + +N+N ++ S I V+ATD D +Y + SN +
Sbjct: 1079 GMVNDINNNGPLFENATYTISIPEDTELRSPILRVTATDMDT-ITSYFIYWISNGNNDGI 1137
Query: 164 VIVPQTGELLLTG----DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL---QFNSPVL 216
+ + G++++ G DPP + + LTV D S + Q+ + NSPV
Sbjct: 1138 FDINEDGDIIVIGDIDRDPPYNYTFFNLTVTVSDGDSNTNNDTTNVQITISDVNDNSPVF 1197
Query: 217 QDEQLLQMIDRKS 229
+ + + M++ S
Sbjct: 1198 EKVEYIFMVNENS 1210
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P V + GN + T L+ + + + + V + GDIDRE Y L++ A
Sbjct: 2834 PTVFVSDADIAGNGDVTLRLEGAGSSDFSLVLNTDNTVTISVDGDIDRENKEMYDLLLIA 2893
Query: 84 TDVKGINKA-ETHVTVDVLDENDNSPVFSQKVY 115
D +++ + + V+VLD NDNSPVF++ Y
Sbjct: 2894 EDGGSPSRSTNSTLKVNVLDINDNSPVFNETRY 2926
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 45 NPTTHEIRNSTESKSGVLLVT-SGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDE 103
NPT ++ +S++G ++V+ SG +DRE Y L++TA D G++ V V +LDE
Sbjct: 2014 NPT--DVPFVIDSETGDIIVSESGVLDRETWDNYRLIVTAFD--GLHDVNATVDVHLLDE 2069
Query: 104 NDNSPVFSQKVYR 116
NDN+P F Y
Sbjct: 2070 NDNTPEFPPNEYS 2082
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 25/100 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY I GND+ F L +P T +L T +DRE + ++ LVI AT V+
Sbjct: 3760 IRYHIVAGNDDGYFML-DPVTR------------ILTTLITLDRESILEHKLVIRATTVR 3806
Query: 88 G------------INKAETHVTVDVLDENDNSPVFSQKVY 115
+ E ++ V + D NDN PVF Q Y
Sbjct: 3807 NTTTTGRRKRDTDLGANEMYIVVPIGDSNDNKPVFQQDTY 3846
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 119/297 (40%), Gaps = 65/297 (21%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ V Y I+ GN + F + N S G+ ++++ D++ E+ +Q+ + IT
Sbjct: 464 PNDDVMYYISSGNHGNHFDIDN-----------STGGLSVISAIDVETEQ-SQFIIEITV 511
Query: 84 TD----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSI 139
+ V +VTV++ D N+N P+F Y + + + S I
Sbjct: 512 YNTEPYVGNQLNNTVNVTVNIQDINNNGPLFENTTYAISIPE----------DTELRSPI 561
Query: 140 GSVSATDADGDKVAYKLAVPSN----LVVIVPQTGELLLTG----DPPSDDVEYELTVEA 191
++ATD D +Y + SN + + + G++++ G DPP+++V + LTV
Sbjct: 562 LRLTATDVDT-ITSYFIYWISNGNNDGIFDINEDGDIIVIGDIDRDPPNNNVFFNLTVTV 620
Query: 192 HDLQSPSRYAREPAQVWLQF-----NSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRP 246
D S + + V + NSPV S+ +R
Sbjct: 621 SDGDSNTD--NDTTSVIIAISDVNDNSPVF------------SQETYRFTADEGVAVATS 666
Query: 247 TKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDE-NGDVRVKKRWDFE 302
+ ++ D G +V + I D + +DE +G++ V + DFE
Sbjct: 667 VGMVTATDKDEGTNGEVV----------SYAIMDGDGTFGIDETSGEISVNRSLDFE 713
>gi|158295627|ref|XP_316322.4| AGAP006256-PA [Anopheles gambiae str. PEST]
gi|157016127|gb|EAA10759.5| AGAP006256-PA [Anopheles gambiae str. PEST]
Length = 1821
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 40/184 (21%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDI-DREEVAQYSLVITA 83
+ ++RYS+ G+ ++ F + N T EIR + G + DRE+ + L++ A
Sbjct: 1104 YNVIRYSLF-GSHSNLFTIDN-QTGEIR-----------IGPGQVLDREKQSVLKLIVVA 1150
Query: 84 TDVKG----INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSI 139
D G KA T V VDVLD NDN+P+F Q+ Y ++ + N V + +
Sbjct: 1151 EDAPGRPQDAKKATTEVMVDVLDVNDNAPIFGQRSYTAVIPE-----NVLVDTF-----V 1200
Query: 140 GSVSATDAD---GDKVAYKL---AVPSNLVVIVPQTGEL----LLTGDPPSDDVEYELTV 189
+++A D D G +V Y + + L+ I P+TGE+ +LTG ++ YEL +
Sbjct: 1201 IAITAHDPDEGLGGEVRYDILNEGEANGLLQINPKTGEIKTKAMLTGKGRAE--PYELVI 1258
Query: 190 EAHD 193
A D
Sbjct: 1259 RAQD 1262
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 23/141 (16%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D EE YSL + A D G + +V +DV+DENDN P F Y + + +
Sbjct: 559 LDYEEQKSYSLALVARDGGG-RETNANVFIDVMDENDNHPAFEALEYTRTIREGAT---- 613
Query: 129 NVSHWKKFSSIGSVSATDAD-----GDKVAYKL----AVPSNLVVIVPQTGELLLTGDPP 179
+F V A D D G +V+Y + ++ ++ + +GE+ +T
Sbjct: 614 ------EFEPQFFVRAVDVDGPTQGGGRVSYAIESENSISGHVFTVDRDSGEIKITRPVS 667
Query: 180 SDDV---EYELTVEAHDLQSP 197
S D +YEL V A D P
Sbjct: 668 SMDTDRGQYELLVVATDHGVP 688
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 67/169 (39%), Gaps = 36/169 (21%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKN-----------PTTHE 50
EN + T + GL I+V P N ++T AL+N PT E
Sbjct: 390 ENLEQDTPLPGLAIVVTDRDLGP-----------NSHYTLALRNLHNSEGVFAVVPTQGE 438
Query: 51 IRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVF 110
R K D+ EE + + A+ V G K+ +VTV + D NDNSP F
Sbjct: 439 GRTPIVVKVLDSSRLDYDVPSEEAKTFRFQLVAS-VDGEEKSTANVTVRLQDANDNSPTF 497
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
Q Y SL + + F I +SATD D ++AY +
Sbjct: 498 PQASY---------SLQVRENSPQGF-KIADLSATDHDAGMFGQLAYAV 536
>gi|358413162|ref|XP_003582481.1| PREDICTED: protocadherin beta-10-like [Bos taurus]
gi|359067600|ref|XP_003586361.1| PREDICTED: protocadherin beta-10-like [Bos taurus]
Length = 799
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 77/160 (48%), Gaps = 22/160 (13%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V
Sbjct: 402 ILMTEGALDRESQAEYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLWVR 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYK-------LAVPSNLVVIVPQTG 170
+ NS H IGSVSATD D +V Y L ++LV I P G
Sbjct: 462 E----NNSPALH------IGSVSATDTDAGANAQVTYSLLPPPDPLVPLASLVSINPDNG 511
Query: 171 ELL-LTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL 209
L LT +E V A D SP+ ++ +V +
Sbjct: 512 HLFALTSLDYEALRAFEFRVGATDRGSPALSSQALVRVLV 551
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 26/152 (17%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVL---LVTSGDIDREEVAQYSLVITATDVKGI-- 89
G N+T NP + + S G++ LV +DRE+ ++SL +TA D G+
Sbjct: 166 GIQNYTI---NPNSFFHIKISGSDEGIIYPELVLDRTLDREKQQEFSLTLTALD-GGLPP 221
Query: 90 NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
T++ + +LD NDN+P FSQ +Y ++ NS V + I VSA DAD
Sbjct: 222 RSGATNIHIVILDVNDNAPQFSQAIYV-----TQTPENSPVGSF-----IAKVSAEDADS 271
Query: 150 D---KVAYKLAVPSNLVV----IVPQTGELLL 174
++Y S ++ I P +GE++L
Sbjct: 272 GIYADISYSFFDASEDILTTFHINPFSGEIIL 303
>gi|148703182|gb|EDL35129.1| mCG142340, isoform CRA_b [Mus musculus]
Length = 1859
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 76/174 (43%), Gaps = 29/174 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ NP T + L T+ IDREE + Y L I A+
Sbjct: 826 ISYLITTGDQRGMFAM-NPVTGQ------------LTTASVIDREEQSFYQLKIVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V D NDN+P F Q V S+N+ V +W+ SI A D
Sbjct: 871 GAVTGDTVVNITVKDLNDNAPHFLQAV---------ESINA-VENWQAGHSIFQAKAVDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSP 197
D +V Y L P NL I Q G + L G Y++ + A D+ P
Sbjct: 921 DEGVNGRVLYSLKQNPKNLFTINEQNGNISLLGALDVHAGSYQVEIVASDMGVP 974
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 73/153 (47%), Gaps = 28/153 (18%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ V+YSI+ G+ + R +KSGV+ T +DREE Y L + A
Sbjct: 720 PNGTVKYSISAGDRS-------------RFQIHAKSGVI-STKMALDREEKTAYQLQVVA 765
Query: 84 TDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
TD + + VTV VLD DN PVFSQ Y F+V + NV+ +GSV
Sbjct: 766 TDGGNLQSPNQAIVTVTVLDTQDNPPVFSQAAYSFVVFE-------NVALGYH---VGSV 815
Query: 143 SATDADGD-KVAYKLAVPS--NLVVIVPQTGEL 172
SAT D + ++Y + + + P TG+L
Sbjct: 816 SATTMDLNANISYLITTGDQRGMFAMNPVTGQL 848
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 84/185 (45%), Gaps = 40/185 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+ YSI +GN+ FA+ +S SG V LV G +D E + YSL+I A D
Sbjct: 1233 LIHYSILKGNEERQFAI------------DSFSGQVTLV--GKLDYEATSAYSLLIQAVD 1278
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
I T +++++LDENDN+P F KS+L +V + + SV+
Sbjct: 1279 SGAIPLNSTCTLSINILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVT 1327
Query: 144 ATDADGDKVA---YKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
ATD+D A Y + +N I P TG + L D E Y+L + A D
Sbjct: 1328 ATDSDSGVNADLHYTITGSNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQ 1384
Query: 195 QSPSR 199
P R
Sbjct: 1385 GRPPR 1389
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 82/195 (42%), Gaps = 40/195 (20%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVL-LVTSGDIDREEVAQYSLVITATDVKG 88
Y I GN+ F L +I + + L LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIVSGNEAGRFRL------DITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KG 226
Query: 89 INKAETH--VTVDVLDENDNSPVFSQKVYR------FIVGDLKSSLNSNVSHWKKFSSIG 140
K + V V V D NDN PVF Y+ +VG SS+
Sbjct: 227 EPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVG----------------SSVL 270
Query: 141 SVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDL 194
V+A DAD + Y+L + P+TG L+T P D +Y LTV+A D
Sbjct: 271 QVAAADADEGTNADIRYRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTVQATDR 328
Query: 195 QSPSRYAREPAQVWL 209
PS R A + L
Sbjct: 329 GVPSLTGRAEALIQL 343
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y++ G D+ +F + + +SG L+ T
Sbjct: 1743 GDGSKIMQLTAMDADEGANALVTYALISGADD-SFRI------------DPESGDLIATK 1789
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + + D ND++P FS+ VY F
Sbjct: 1790 -RLDREHRSKYSLLVRADD--GLQSSDMRINITISDVNDHTPRFSRPVYSF 1837
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVF 110
L T+ +DREE A Y L I ATD+ ++ T V V +LD NDNSPVF
Sbjct: 641 LSTASSLDREEQAFYCLSILATDLGSPPQSSTAQVNVSLLDINDNSPVF 689
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 84/208 (40%), Gaps = 29/208 (13%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYSI GN F + +E V +G +DRE +Q L I+A D +
Sbjct: 510 LRYSIVSGNGLGWFHI-----------SEHSGLVTTSAAGGLDRELASQIVLNISARD-Q 557
Query: 88 GINKAETH--VTVDVLDENDNSPVFSQ-KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
G++ ++ + V VLD ND PVFSQ K Y S+ N + +G+
Sbjct: 558 GVHPKVSYAQLVVTVLDVNDEKPVFSQPKGYEV-------SVVENAPTGTELLVLGATDR 610
Query: 145 TDADGDKVAYKLAVPSN---LVVIVPQTGELLLTGDPPSDD-VEYELTVEAHDLQSPSRY 200
D V + L N L + P +G L ++ Y L++ A DL SP +
Sbjct: 611 DLGDNGTVRFSLQEAENDQRLFRLDPVSGRLSTASSLDREEQAFYCLSILATDLGSPPQS 670
Query: 201 AREPAQVWL---QFNSPVLQDEQLLQMI 225
+ V L NSPV Q I
Sbjct: 671 STAQVNVSLLDINDNSPVFYPVQYFAHI 698
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 53/123 (43%), Gaps = 27/123 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y+IT GN+ F + G L + S ++DRE +Y L++ A+D +
Sbjct: 1031 IAYTITDGNNGDAFGIF-------------PDGQLYIKS-ELDRELQDRYVLLVVASD-R 1075
Query: 88 GINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ V V VL D NDN P+F+ Y F + + S +G VSA
Sbjct: 1076 AVEPLSATVNVTVLLEDVNDNRPLFNSTNYTFYFEE----------EQRAGSFVGKVSAV 1125
Query: 146 DAD 148
D D
Sbjct: 1126 DKD 1128
>gi|126290942|ref|XP_001377600.1| PREDICTED: protocadherin beta-3 [Monodelphis domestica]
Length = 796
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 16/99 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIVG 120
L+T G +DRE AQY+++IT D+ G + +T ++TV + D NDN PVF+Q Y F +
Sbjct: 403 LITEGGLDRESKAQYNIMITVMDL-GFPRLQTVHNITVFISDVNDNPPVFTQTAYIFYLE 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKL 156
+ N+ SH +G+VSA D D KV Y L
Sbjct: 462 E----NNTPASH------LGNVSANDRDSGTNAKVTYSL 490
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y+++ N+ F L+ + E R E LV S +DREE A++ L++TA
Sbjct: 164 PNAVQNYTLSP---NYHFHLQTHSRGEGRKFPE------LVLSKALDREEQAEFILILTA 214
Query: 84 TDVKGINKAET-HVTVDVLDENDNSPVFSQKVY 115
D ++ T V + V+D NDN+P+F Q Y
Sbjct: 215 VDGGSPPRSGTARVRIVVVDINDNAPLFVQPRY 247
>gi|403256574|ref|XP_003920944.1| PREDICTED: uncharacterized protein LOC101029397 [Saimiri boliviensis
boliviensis]
Length = 2294
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 68/138 (49%), Gaps = 20/138 (14%)
Query: 30 YSITQGNDNHT----FALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
+S++ + H +++N +R S E+ + VT G +DRE A+Y++ IT TD
Sbjct: 1460 FSVSDADSGHNQQVICSIENNLPFLLRPSVENFYTI--VTEGALDRETRAEYNVTITVTD 1517
Query: 86 VKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+ K E +TV V D NDN+P F+Q Y V + NS H IGSVSA
Sbjct: 1518 LGTPRLKTEHSITVLVSDVNDNAPAFTQTSYTLFVRE----NNSPALH------IGSVSA 1567
Query: 145 TDADGD---KVAYKLAVP 159
TD D +V Y L P
Sbjct: 1568 TDRDSGSNAQVTYSLLPP 1585
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 51/99 (51%), Gaps = 14/99 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+T G +DRE +Y++ IT TD+ K E +TV V D NDN+P F+Q Y V +
Sbjct: 2088 LLTEGALDRERRNEYNITITVTDLGTPRLKTEHSITVRVSDVNDNAPAFTQTSYTLFVRE 2147
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA 157
NS H IGSVSATD D +V Y A
Sbjct: 2148 ----NNSPALH------IGSVSATDRDSGSNAQVTYSAA 2176
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT TD+ K E +TV V D NDN+P F+Q Y V +
Sbjct: 903 LVTQRKLDRESQAEYNITITVTDLGTPRLKTEHSITVLVSDVNDNAPAFTQTSYTLFVRE 962
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDA 147
S V + +S+G S +
Sbjct: 963 NNSPALHIVCRRSRAASVGRCSVPEG 988
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 81/173 (46%), Gaps = 28/173 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ + H F RN ++ K LV +DREE Q L +TA D
Sbjct: 1855 YTISTNSYFHLFT---------RNHSDGKKYPELVLDQALDREEQTQLRLTLTALDGGSP 1905
Query: 90 NKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ T V + ++D NDN+P F+Q++Y V + N+ + S + +VSATD D
Sbjct: 1906 PRTGTSQVLIVIVDINDNAPEFAQRLYEVQVPE-----NTPIG-----SLVVTVSATDLD 1955
Query: 149 G---DKVAYKLAVPSNLVV----IVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
+++Y SN ++ I TGE+ L ++++ Y + VEA D
Sbjct: 1956 SGTYGELSYSFFQYSNQIIQAFEINSMTGEIRLKKVLDFEEIQSYHVEVEASD 2008
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIV 119
LVT +DRE +Y++ IT TD+ G + +T T+ +L D NDN+P F+Q Y V
Sbjct: 402 LVTERPLDRESRDEYNVTITVTDL-GTPRLKTQQTITLLVSDVNDNAPAFTQTSYTLFV 459
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 45 NPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLD 102
NP H + RN +E + LV +DREE + L +TA D ++ T + + VLD
Sbjct: 1268 NPHFHVLTRNRSEGRKFPELVLDKPLDREEQPRLRLTLTALDGGSPPRSGTSEIQIQVLD 1327
Query: 103 ENDNSPVFSQKVY 115
NDN P F+Q++Y
Sbjct: 1328 INDNVPEFAQELY 1340
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 2 ENSKSGTGVKGLPILVASSHK-HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
ENS+ GT P+L+A + L +Y+I+ + H RN +E +
Sbjct: 143 ENSQPGTL---FPLLIAEDLDVGSNGLQKYTISPNSHFHILT---------RNHSEGRKY 190
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYR 116
LV +DREE ++SL + A D ++ T V + ++D NDN+P F YR
Sbjct: 191 PDLVQDKPLDREEQPEFSLTLVALDGGSPPRSGTVMVRILIIDVNDNAPEFVHTPYR 247
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + SL +TA D ++ T V V VLD NDN+P F Q +Y + +
Sbjct: 695 LVLDKALDREERPELSLTLTALDGGAPPRSGTTTVRVVVLDNNDNAPEFLQSLYEVQIPE 754
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
NS+V+ S I +VSA D D V Y L
Sbjct: 755 -----NSSVN-----SLIIAVSARDLDAGAYGSVVYAL 782
>gi|345497484|ref|XP_001600457.2| PREDICTED: fat-like cadherin-related tumor suppressor homolog
[Nasonia vitripennis]
Length = 4817
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+VT +DRE+ + + + A+D G V V V DENDNSPVF K Y
Sbjct: 2645 IVTKKSLDREKHKLFEIPVMASDGGG-KSGFVIVRVKVTDENDNSPVFLLKEY------- 2696
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPS-----NLVVIVPQTGELLLTGD 177
K+S+ N++ F + ++ A + D K+ Y + P N+ I P TG + L
Sbjct: 2697 KASIYGNLTLNSAFLKVKALDADEGDAAKIIYSIFEPQNSEIKNIFGINPDTGAVFLKKS 2756
Query: 178 P-PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQ 210
P + ++L V A D S + P ++++
Sbjct: 2757 AKPWETQPFQLFVRAQDKGLASHHVDVPVEIYIM 2790
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 126/288 (43%), Gaps = 51/288 (17%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV-KG 88
Y I+ G+ + F + +P T E+R L+ G +DRE +Y L IT D+ K
Sbjct: 833 YGISAGDSDSVFGI-DPDTGELR----------LI--GRLDREREDEYFLNITVYDLGKP 879
Query: 89 INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
A + V VLD NDN+P F + + F V + ++LN + I + TDAD
Sbjct: 880 QKSASRMLAVSVLDVNDNAPKFEKALASFRVSE--AALNGTI--------IFRANTTDAD 929
Query: 149 ---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD-DVEYELTVEAHDLQSPSRYAREP 204
+VAY L ++ + TG L + G + YEL + A D ++ EP
Sbjct: 930 LGENAQVAYSLVTDTSDFRVDRTTGVLTVFGKLDRERQSSYELRIRATD-KNGGNDKGEP 988
Query: 205 AQVWLQFNSPVLQDEQLLQM-IDRKSEAPHRIEKRRVTRAVRP-------TKRIDFSETD 256
F++P L E L+++ +D ++ + T VR I+ ++ D
Sbjct: 989 -----DFDNPALYSEALVRVSVDDVNDNAPKFALTSYTVKVREDVPVWSVIAVIEATDPD 1043
Query: 257 GEMEGRIVFALEKETEREKFKIRDENPWITVDE-NGDVRVKKRWDFEE 303
G I ++ +E E E F +D+ +G +R ++ DFEE
Sbjct: 1044 EGPGGIIEYSFSEEMESEGF--------FGIDKLSGTIRSLQKLDFEE 1083
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 28/214 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN + G+ VK + SS +++ I GN F + NP+T I ST+ +
Sbjct: 1763 ENEEIGSFVKHIEARSTSS-------LQFEIVSGNIGEAFFI-NPSTGVI--STQER--- 1809
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+D E+V Y+L I AT + G + A+ +V V VLD NDN+P F Q VY V +
Sbjct: 1810 -------LDYEDVKFYNLSIAATSMSGAS-AQCNVIVHVLDRNDNAPQFVQAVYTGQVSE 1861
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLA--VPSNLVVIVPQTGELLLTG 176
+S+ S V SS + A DAD + A Y + +P I TG +
Sbjct: 1862 -AASIGSLVFSANSTSSPLVIKAEDADSELNALLNYDIVEELPRKFFHIDSSTGAIRTVM 1920
Query: 177 DPPSDDV-EYELTVEAHDLQSPSRYAREPAQVWL 209
+ + E++ V+ DL P + A+V +
Sbjct: 1921 LLDHETIPEFQFNVKVSDLGKPKLSSESTAKVII 1954
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 121/271 (44%), Gaps = 31/271 (11%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA-TDVKGINKAET 94
N++ F++ NPT + T SG + T DRE + +Y L++ A + V A T
Sbjct: 2100 NEHVVFSILNPTEMFVIGPT---SGAISTTGIRFDRETIDKYELIVEANSQVPTQRVAHT 2156
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GD--K 151
V V VLD NDN P+F Y +V S+++ +K I V A D D GD +
Sbjct: 2157 IVNVTVLDINDNCPIFVNLPYYAVV-----SVDA-----QKGDVIMKVHAIDLDSGDNGE 2206
Query: 152 VAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQ 210
V Y+L L + +TGE+ L + + EY+L + A+D P V +
Sbjct: 2207 VRYELKKGHGELFKVNRKTGEISLKQNLEGHNREYQLMIAAYD------GGISPCSVEIS 2260
Query: 211 FNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKE 270
N V+ ++ + + D++ +E V + + + + + ++++++ K
Sbjct: 2261 VNVKVI--DRSMPVFDKQFYTDSVLESIEVHSPLALSI-----QAESPLNRKLIYSITKG 2313
Query: 271 TEREKFKIRDENPWITVDENGDVRVKKRWDF 301
+ E+F + I V + D KK+++
Sbjct: 2314 NDFEEFALDFNTGVIYVVDELDYEQKKQYEL 2344
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 49/93 (52%), Gaps = 15/93 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-VKG 88
YSIT+GND FAL + +GV+ V ++D E+ QY L + ATD V G
Sbjct: 2308 YSITKGNDFEEFAL------------DFNTGVIYVVD-ELDYEQKKQYELTVRATDSVSG 2354
Query: 89 INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+ AE V++ VLD ND P FSQ Y + +
Sbjct: 2355 V-YAEVLVSILVLDVNDCPPEFSQDSYNISISE 2386
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 46/91 (50%), Gaps = 16/91 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y+I GN++ F + ++KSGV+ + +D E Y L I A D
Sbjct: 3354 VYYTIVGGNEHKKFEI------------DTKSGVVSIAE-QLDYERAKDYFLTIQAID-G 3399
Query: 88 GINKAETHVTVD--VLDENDNSPVFSQKVYR 116
G+ H TV+ VLD NDN+P+FSQ YR
Sbjct: 3400 GVPPLTNHATVNITVLDSNDNAPMFSQASYR 3430
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 16/94 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI +G+ F + +S+SG + V + +DRE++A Y L + A D
Sbjct: 3459 VSYSIERGDRQKQFTI------------DSQSGQITVLA-PLDREQIASYVLEVHAKD-N 3504
Query: 88 GINKAETHVTVD--VLDENDNSPVFSQKVYRFIV 119
GI +V V+ V+D NDN P+F+Q Y +V
Sbjct: 3505 GIPTLSNYVIVNIEVIDANDNPPLFAQNNYTTVV 3538
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 139/334 (41%), Gaps = 66/334 (19%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E S G+ V L +L P+ +R+ +T G N F+L + ++GV
Sbjct: 3122 EGSHPGSYV--LTVLATDYDDEPNAKLRFYLT-GGKNEKFSL------------DKETGV 3166
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
L T G +DRE A+Y L D + + + + + + D NDN+P FS + Y
Sbjct: 3167 LK-TVGQLDRESQAKYILTAHVQDRDKTSWECSSQLEILISDLNDNAPRFSMQSY----- 3220
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSN-LVVIVPQTGELLLTG 176
++L +V + + + V ATD D K+ Y+ +N VI P +G ++T
Sbjct: 3221 --SATLPEDV---EVGTLVTKVHATDDDIGINRKIRYEFLDSANDHFVISPDSG--IVTL 3273
Query: 177 DPPSD---DVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPH 233
P D Y ++++A D +P Q +S + + D E
Sbjct: 3274 AKPLDRETKAMYNVSIQAMDQGTP------------QLSSVTFLIVNVQDINDNPPEFTS 3321
Query: 234 RIEKRRVTR--AV-RPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDEN 290
+ RV AV R+ + D + + + + E +KF+I ++
Sbjct: 3322 KYYFARVPEIDAVGTEVARVLATSKDTGVNADVYYTIVGGNEHKKFEID--------TKS 3373
Query: 291 GDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
G V + ++ D+ E+ D+++TI QA +GG
Sbjct: 3374 GVVSIAEQLDY-----ERAKDYFLTI--QAIDGG 3400
>gi|440896003|gb|ELR48045.1| Protocadherin-16 [Bos grunniens mutus]
Length = 3188
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+ G L +G +D E+ +Y L + A D G ++ ++TV V D NDNSP FSQ +Y+
Sbjct: 2216 RYGGRLSLTGPLDFEQRDRYHLQLLAHD--GPHEGRANLTVFVEDVNDNSPAFSQTLYQV 2273
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLL 174
++ + H S+I SVSATD D V+Y LA + I P G L
Sbjct: 2274 ML----------LEHTPPGSAILSVSATDRDSGANGHVSYHLASSAEGFSIDPNNGTLFT 2323
Query: 175 TGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWLQ 210
T + E ++ +EA D P R AR V LQ
Sbjct: 2324 TVGTVALGHEGPGMVDVVLEARDHGVPVRAARATVHVQLQ 2363
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVIT 82
H V YSI GN F L+ P E S L LV +D E + QY+L +
Sbjct: 2405 HAAVDYSIVSGNRGRVFQLE-PRLAEAGESDGLGPRALGCLVLLEPLDFESLTQYNLTVA 2463
Query: 83 ATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
ATD + + VTV VLD NDN PVF++ YR V
Sbjct: 2464 ATDRGQPPRSSAVPVTVSVLDVNDNPPVFTRAAYRVAV 2501
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 6/135 (4%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE Y L++ D ++ T V + VLD NDNSP F Q G L +
Sbjct: 1167 LDRERQNSYQLLVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTFLQ-ASGAAGGGLPIQVP 1225
Query: 128 SNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGELLLTGDP--PSDDVE 184
V +++ + + + + Y L P S L + P +GE LLT P ++
Sbjct: 1226 DGVPPGTLVTTLQAKDPDEGENGTILYMLTGPGSELFSLHPHSGE-LLTAAPLIRAERPH 1284
Query: 185 YELTVEAHDLQSPSR 199
Y LT+ AHD SP R
Sbjct: 1285 YVLTLSAHDQGSPPR 1299
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 25/131 (19%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LVR++++ G+ F L + SG L + +D E A++ LV+ A
Sbjct: 2523 PHGLVRFTLSSGDPLGLFEL------------DESSGDLRLAR-PLDCETQARHQLVVQA 2569
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G + A VT++V D ND+ P F + L +SL N +++ ++
Sbjct: 2570 ADPAGAHFALAPVTIEVQDVNDHGPAFPLSL-------LSTSLAENQPPGTLVTTLHAI- 2621
Query: 144 ATDADGDKVAY 154
DGD A+
Sbjct: 2622 ----DGDAGAF 2628
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 102/270 (37%), Gaps = 47/270 (17%)
Query: 43 LKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDV 100
L P++ E+R +T +DRE+ Y+ + A D T VT+ V
Sbjct: 1793 LLEPSSGELRTATT------------LDREQCPSYAFTVNAVDSAAAGPLSTTVPVTITV 1840
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA 157
D ND++P F R + ++ + + ++ A D D + Y+LA
Sbjct: 1841 RDVNDHAPTFPTSPLRLRLPRPGPVFSTPI------LPLATLRAEDRDAGANASILYRLA 1894
Query: 158 -VPSNLVVIVPQTGELLLTGDP----PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFN 212
P + TGE+ ++ P P D V L + A DL P+R A + LQ
Sbjct: 1895 GTPPPGTTVDSYTGEIRVSRSPVSLSPRDRV---LFIVATDLGRPARSATGVVIIGLQGE 1951
Query: 213 SPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETE 272
S E + SEA R T V P K I G G I +++ E
Sbjct: 1952 S-----EHGPRFSRASSEAMLRENAPPGTPVVSP-KAIH----AGGSSGPITYSILSGNE 2001
Query: 273 REKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ F I+ IT VR + DFE
Sbjct: 2002 KGTFSIQPSTGAIT------VRSAEGLDFE 2025
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 404 EGGEGH-FAL----------STQDSVIYLVCVARRLDREERDAYNLRVTATDSGSPPLRA 452
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + V D NDN+P F +++YR
Sbjct: 453 EAAFVLHVTDVNDNAPAFDRQLYR 476
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 17/120 (14%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ TF L E R + LV +G++DRE + Y L + A D
Sbjct: 178 YALSGDGAGETFRL------ETRPGPDGAPVPELVVTGELDRENRSHYMLQLEAYDGGSP 231
Query: 90 -NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+A+ + V +LD ND++P F+Q Y V + SL+ S + V A+DAD
Sbjct: 232 PRRAQALLDVTLLDINDHAPAFNQSRYHAAVSE---SLSPG-------SPVLQVYASDAD 281
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHV-TVDVLDENDNSPVFSQKVYRFIV 119
+DRE+ A+Y L + A+D ++ T + TV V D ND +P F Q+ Y ++
Sbjct: 1497 LDREQRAEYVLTVVASDHGSPPRSATQLLTVSVADVNDEAPAFQQQEYSVLL 1548
>gi|292620533|ref|XP_002664330.1| PREDICTED: protocadherin gamma-A11-like [Danio rerio]
Length = 810
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 90/177 (50%), Gaps = 32/177 (18%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
RYS+ Q NDN A+ N H +N V L+ ++DRE+ + +L++TA D
Sbjct: 170 RYSL-QKNDNFQLAI-NSDVHGEKN-------VELLLEKELDREQQKEVTLILTAVDGGT 220
Query: 89 INKAET---HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
++ T HVTV LD NDN+PVFSQ VY+ + + NS V + + +VSAT
Sbjct: 221 PPRSGTVAIHVTV--LDANDNAPVFSQAVYKVSLPE-----NSPVD-----TVVVTVSAT 268
Query: 146 DAD---GDKVAYKLAVPSN----LVVIVPQTGELLLTGDPP-SDDVEYELTVEAHDL 194
DAD +V Y + S+ + + TG++ + G D+ YEL VE D+
Sbjct: 269 DADEGQNGEVTYAFSRISDKAKKMFSLDKNTGDVRIAGALDFEDEAVYELRVEGKDV 325
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G++DRE +++Y++ ITATD + T ++ + V D NDN PVF Q+ YR V +
Sbjct: 405 LVTTGELDRELLSEYNITITATDEGSPPLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 464
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ K SSI SVSATD D
Sbjct: 465 ----------NNKAGSSICSVSATDPD 481
>gi|327270487|ref|XP_003220021.1| PREDICTED: protocadherin alpha-5-like [Anolis carolinensis]
Length = 822
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 17/149 (11%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKV 114
+ S ++LV + +DRE++ + L++TA D T H+ V V+D NDN+P F+Q +
Sbjct: 188 QHSSPLVLVLNKPLDREKIPVHHLLLTAVDEGQPELTGTAHLDVTVMDANDNAPAFNQSI 247
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV--PSNLVVIVPQT 169
Y+ V L++ LN + + ++ATD D ++Y + PSN+ I T
Sbjct: 248 YK--VKLLENVLNGTL--------VIKLNATDLDEGINKDISYSFSNNDPSNIFSIQSDT 297
Query: 170 GELLLTGDPPSDDVE-YELTVEAHDLQSP 197
GE+ + G +D+ Y + VEA D SP
Sbjct: 298 GEIRVKGKVDFEDISVYNIEVEAKDKGSP 326
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 16/91 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YS + + ++ F++++ T EIR G +D E+++ Y++ + A D K
Sbjct: 278 ISYSFSNNDPSNIFSIQS-DTGEIR------------VKGKVDFEDISVYNIEVEAKD-K 323
Query: 88 GINKAETHVT--VDVLDENDNSPVFSQKVYR 116
G H T V++LD NDN+P S K+ R
Sbjct: 324 GSPPLSGHCTILVEILDMNDNAPELSLKLMR 354
>gi|345328648|ref|XP_003431289.1| PREDICTED: protocadherin gamma-A10-like [Ornithorhynchus anatinus]
Length = 870
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 25/171 (14%)
Query: 36 NDNHTFALKNPT--THEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE 93
N H+++L N + E++ + ++ +DRE A +SL +TATD G N A
Sbjct: 165 NSLHSYSLSNNQHFSLEVKTRAGGRKYAEMILEKPLDREIKAMHSLTLTATD--GGNPAR 222
Query: 94 TH---VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-- 148
+ + V VLD NDN+P+F + +Y+ G ++ + + S + V ATD D
Sbjct: 223 SGTALIRVKVLDANDNAPIFDRTLYQ---GKVREDIPTG-------SPVVRVKATDKDEG 272
Query: 149 -GDKVAYKLAVPSN----LVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
V Y L S+ L V+ PQ+GE+ + G+ + +E YEL ++A D
Sbjct: 273 SNSLVTYSLVKLSDKDSGLFVMDPQSGEIKVEGNLDFEAMEFYELEIQAKD 323
>gi|262263221|tpg|DAA06598.1| TPA_inf: protocadherin gamma a5 isoform [Anolis carolinensis]
Length = 942
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 70/137 (51%), Gaps = 25/137 (18%)
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DREE + Y L++TATD ++ T + V VLD NDN+P+F+Q +Y V +
Sbjct: 202 LDREEQSVYDLILTATDGGDPFRSGTAQIKVRVLDANDNAPIFNQPIYEVTVKE------ 255
Query: 128 SNVSHWKKFSSIGSVSATDAD---GDKVAYKL----AVPSNLVVIVPQTGELLLTGDPPS 180
+ K S++ +VSATD D +V Y L S ++ TGE+ LTG S
Sbjct: 256 ----NIPKGSTVATVSATDLDEGLNGEVKYSLRKVTQFHSPQFLLNSTTGEITLTG---S 308
Query: 181 DDVE----YELTVEAHD 193
D E +E VEA D
Sbjct: 309 LDYEISSLHEFEVEAKD 325
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIV- 119
LVT+G +DRE + +++ IT TD GI T + + VLD NDN PVF + Y F +
Sbjct: 406 LVTAGTLDREHMPTFNITITGTD-NGIPPLSTTTVIALQVLDTNDNPPVFEKTDYTFYLV 464
Query: 120 -----GDLKSSLNSNVSHWKKFSSI 139
G L SL +N W++ + I
Sbjct: 465 ENNHRGSLIFSLRANDPDWEENARI 489
>gi|194219797|ref|XP_001917802.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B5 [Equus
caballus]
Length = 806
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 22/167 (13%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQK 113
+ SK+ LVT G +DRE+ +Y++ ITATD K A VT+ + D NDN+PVF Q
Sbjct: 392 SSSKNSYKLVTDGTLDREQTPEYNVTITATDRGKPPLSASISVTLHITDVNDNAPVFHQA 451
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVP-------SNLV 163
Y V + + +SI VSA+D D +V+Y + S+ V
Sbjct: 452 SYVVHVAE----------NNPPGASIAQVSASDPDLGPNGRVSYSIVASDLEPRALSSYV 501
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL 209
+ Q+G + + + +ELT++A D SP+ A +V +
Sbjct: 502 SVSAQSGVVFAQRSFDHEQLRAFELTLQARDQGSPALSANASLRVLV 548
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 40/81 (49%), Gaps = 11/81 (13%)
Query: 69 IDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE+ + LV+TA D T + + V D NDN PVF Q VYR SL
Sbjct: 200 LDREQQGYHRLVLTALDGGDPPLSGTTELRIQVTDANDNPPVFHQDVYRV-------SLR 252
Query: 128 SNVSHWKKFSSIGSVSATDAD 148
NV +++ VSATD D
Sbjct: 253 ENV---PPGTAVLQVSATDQD 270
Score = 37.4 bits (85), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 57 SKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSP 108
SKSG + T +D EE+ +YS+V+ D G+ A+ V +++ DENDNSP
Sbjct: 292 SKSGEI-TTLRTLDFEEIKKYSIVVEGRDGGGL-VAQCTVEINIQDENDNSP 341
>gi|149640326|ref|XP_001510246.1| PREDICTED: protocadherin beta-14-like [Ornithorhynchus anatinus]
Length = 796
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 61/117 (52%), Gaps = 22/117 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE ++Y++ IT TD+ N KAE ++TV + D NDN+PVFSQ Y V +
Sbjct: 403 LVTDRALDRESQSEYNVTITVTDLGSPNLKAEKNITVLISDVNDNAPVFSQTSYTLYVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVIVPQTGELLLT 175
NS H IG V A D D +V+Y L + P+ GEL L+
Sbjct: 463 ----NNSPALH------IGRVQAADKDSGENARVSYSL--------LSPEDGELPLS 501
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 114/270 (42%), Gaps = 43/270 (15%)
Query: 48 THEIRNSTE--SKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDEND 105
+ EIR + E KSG + VT G +D E Y + I ATD G++ T V V V D ND
Sbjct: 285 SEEIRKTFEINPKSGEIRVT-GKLDFEVTQLYVVDIQATDGGGLSGKCT-VLVQVTDAND 342
Query: 106 NSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVV 164
N+P + ++G + +L V + + D D GD ++ ++L
Sbjct: 343 NAPEITMSS---VIGHIPENLPETV--------VAVFNIKDRDSGDNGRMVCSIQNDLPF 391
Query: 165 IVPQTGE--LLLTGDPPSD---DVEYELTVEAHDLQSPSRYAREPAQVWL---QFNSPVL 216
+ QT E L D D EY +T+ DL SP+ A + V + N+PV
Sbjct: 392 TLKQTFENFYTLVTDRALDRESQSEYNVTITVTDLGSPNLKAEKNITVLISDVNDNAPVF 451
Query: 217 -QDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREK 275
Q L + + S A H R+ ++ D R+ ++L + E
Sbjct: 452 SQTSYTLYVRENNSPALH-------------IGRVQAADKDSGENARVSYSLLSPEDGE- 497
Query: 276 FKIRDENPWITVD-ENGDVRVKKRWDFEEL 304
+ +I+++ +NG++ + DFE +
Sbjct: 498 ---LPLSSYISLNSDNGNLYSLRSMDFETI 524
>gi|441596913|ref|XP_004087349.1| PREDICTED: cadherin-3 [Nomascus leucogenys]
Length = 774
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 197 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 248
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+PVF + Y
Sbjct: 249 DGDGSTTTAVAVVEILDANDNAPVFDPRKY 278
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DREE+A+Y L A G + + ++++ V D+ND+ P F+Q
Sbjct: 104 AVEKETGWLLLNKP-LDREEIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQ 162
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+R V L+ L +S+ V+ATD D
Sbjct: 163 DTFRGSV--LEGVLPG--------TSVMQVTATDED 188
>gi|441596429|ref|XP_004092929.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-9 [Nomascus
leucogenys]
Length = 476
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 54/102 (52%), Gaps = 14/102 (13%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ IT TD+ K E +T+ V D NDN+P F+Q Y +
Sbjct: 81 ILMTEGALDRESKAEYNITITVTDLGTPRLKTEHSITLQVSDVNDNAPTFTQTSYTLFLR 140
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP 159
+ NS H IGSVSATD D +V Y L P
Sbjct: 141 E----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPP 172
>gi|432957009|ref|XP_004085754.1| PREDICTED: protocadherin gamma-A6-like, partial [Oryzias latipes]
Length = 632
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 77/140 (55%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVT-VDVLDENDNSPVFSQKVYRFIVGD 121
LV ++DREE + L++TA D ++ T V V VLD NDN+PVFS+ VY + +
Sbjct: 192 LVLDKELDREEQQELKLLLTAVDGGSPQRSGTVVIHVTVLDANDNAPVFSESVYTANLQE 251
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPS----NLVVIVPQTGELLL 174
S LN+ V VSA+DAD ++ Y+ + S N+ + +TGE+ +
Sbjct: 252 -NSPLNTPVIR---------VSASDADDGINGEITYEFSRLSDKTQNIFSLAEKTGEITV 301
Query: 175 TGDPPSDDV-EYELTVEAHD 193
TG+ +++ +YE+ +EA D
Sbjct: 302 TGNINYEELSKYEVMIEAKD 321
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 89/187 (47%), Gaps = 21/187 (11%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
S K+G + VT G+I+ EE+++Y ++I A D G++ +E V +D+ D NDN+PV
Sbjct: 291 SLAEKTGEITVT-GNINYEELSKYEVMIEAKDGYGLS-SEAKVIIDITDVNDNAPV---- 344
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK-----VAYKLAVPSNLVVIVPQ 168
IV L SS+ N + +G ++ D D DK + + P LV +
Sbjct: 345 ---IIVKSLSSSIPENAPPG---TEVGIINVQDRDSDKNGQVRCSIQGNAPFKLVPSIKN 398
Query: 169 TGELLLTGDPPSDDV-EYELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQM 224
++ TG + V +Y +T+ A D SP + + + + N PV +++
Sbjct: 399 YYSVVSTGQLDRELVSDYNITISATDEGSPPLSSSKTVHLSVADINDNPPVFEEQSYSAY 458
Query: 225 IDRKSEA 231
+ ++A
Sbjct: 459 VSENNQA 465
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+V++G +DRE V+ Y++ I+ATD ++ ++T V + V D NDN PVF ++ Y V
Sbjct: 402 VVSTGQLDRELVSDYNITISATDEGSPPLSSSKT-VHLSVADINDNPPVFEEQSYSAYVS 460
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + + S++ SVSA D D
Sbjct: 461 E----------NNQAGSTLCSVSARDPD 478
>gi|291387498|ref|XP_002710308.1| PREDICTED: protocadherin beta 15 [Oryctolagus cuniculus]
Length = 811
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 16/102 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT G +DRE A+Y++ IT +D+ G + T H+ V V D NDN+P FSQ Y +V
Sbjct: 403 LVTDGALDRETRAEYNITITVSDL-GTPRLTTRHHIAVQVSDVNDNAPTFSQAAYTLLVR 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP 159
+ N++ IGSVSA+D D +V Y L P
Sbjct: 462 E-----NNSPGLL-----IGSVSASDRDAGANAQVTYSLLPP 493
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 20/122 (16%)
Query: 36 NDNHTFAL-KNPTTH-EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI--NK 91
N +A+ NP H R+ + + LV ++DREE A+ SL + A D G+
Sbjct: 165 NSVQNYAIGANPHFHVSTRHRGDGRKYPELVLDKELDREEQAELSLTLAALD-GGVPPRS 223
Query: 92 AETHVTVDVLDENDNSPVFSQKVY---------------RFIVGDLKSSLNSNVSHWKKF 136
+ V VLD NDN+P F Q +Y R DL + N +S+ +
Sbjct: 224 GNARIRVLVLDANDNAPAFVQPLYEAQLPENSPVGSLVVRVSARDLDAGTNGEISYSLIY 283
Query: 137 SS 138
SS
Sbjct: 284 SS 285
>gi|18087789|ref|NP_444368.1| protocadherin beta 13 precursor [Mus musculus]
gi|13876286|gb|AAK26063.1| protocadherin beta 13 [Mus musculus]
gi|148678211|gb|EDL10158.1| protocadherin beta 13 [Mus musculus]
gi|187952819|gb|AAI38125.1| Protocadherin beta 13 [Mus musculus]
gi|187953817|gb|AAI38124.1| Protocadherin beta 13 [Mus musculus]
Length = 796
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
L T G +DRE ++Y++ IT TD+ H +TV V D NDN+P F+Q Y V +
Sbjct: 401 LETDGALDRESRSEYNITITVTDMGTPRLTTQHNITVQVSDINDNAPAFTQTSYTLFVHE 460
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVP-------SNLVVIVPQTGE 171
NS H IG++SATD+D + Y L +P ++LV I G+
Sbjct: 461 ----NNSPALH------IGTISATDSDSGSNAHITYSLLLPQDKQLTLTSLVSINADNGQ 510
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V+A D SP+
Sbjct: 511 LFALRALDYEALQAFEFRVDATDQGSPA 538
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 45 NPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLD 102
NP H + RN ++ K LV +DRE+ Q L +TA D ++ T + + VLD
Sbjct: 174 NPHFHVLTRNRSDGKKFPELVLDKALDREKQDQLRLKLTAVDGGSPPRSGTTEIQILVLD 233
Query: 103 ENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLA 157
NDN+P F+Q++Y V + NS + S + +VSA D D +V+Y L+
Sbjct: 234 INDNTPEFAQELYEVQVPE-----NSPIG-----SLLITVSARDLDAGPFGEVSYGLS 281
>gi|444709344|gb|ELW50365.1| Cadherin-3 [Tupaia chinensis]
Length = 886
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 309 VVAYSI------HSQEPKDP--HDLMFTVHRSTGTISVVSSGLDREKVPEYTLTIQATDM 360
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+P+F + Y
Sbjct: 361 NGDGSTTTAVAVVEILDANDNAPIFDPQKY 390
>gi|403290568|ref|XP_003936385.1| PREDICTED: cadherin-3 isoform 2 [Saimiri boliviensis boliviensis]
Length = 784
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 252 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVVSSGLDREKVPEYTLTIQATDM 303
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+PVF + Y
Sbjct: 304 DGDGSTTTGVAVVEILDANDNAPVFDPQKY 333
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DREE+A+Y L A G + + ++++ V D+ND+ P F+Q
Sbjct: 159 AVEKETGWLLLNK-PLDREEIAKYELFGYAVSENGSSVEHPMNISIIVTDQNDHKPKFTQ 217
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
++R V L+ L +S+ V+ATD D
Sbjct: 218 DIFRGSV--LEGVLPG--------TSVMQVTATDED 243
>gi|350587824|ref|XP_003482493.1| PREDICTED: protocadherin Fat 4-like [Sus scrofa]
Length = 1741
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
LVRYSI+ GN+ FA+ S +G+L + +D E ++ + I+ATD
Sbjct: 908 LVRYSISSGNEEGIFAIN------------SSTGILTLAKA-LDYELCQKHEMTISATDG 954
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + VTV+V+D NDNSPVF Y V + + +++ ++AT
Sbjct: 955 GWVARTGYCSVTVNVIDVNDNSPVFLPDEYFPTV----------LENAPSGTTVIHLNAT 1004
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
DAD +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 1005 DADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQG---FLDFETKQSYHLTVKAFNVPDE 1061
Query: 198 SRYAREPAQVWLQ 210
R + + L+
Sbjct: 1062 ERCSFATVNIQLK 1074
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 87/176 (49%), Gaps = 31/176 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN H+F++ N T EIR+ +DRE+ AQY L I +
Sbjct: 484 PNGQLDYEIVNGNREHSFSI-NHATGEIRSIRP------------LDREKTAQYVLTIKS 530
Query: 84 TDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D KG A V +++LDENDN+P FSQ ++ V + NS + + ++
Sbjct: 531 SD-KGSPSQSASVKVIINILDENDNAPRFSQ-IFSAHVPE-----NSPLGY-----TVTR 578
Query: 142 VSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ +D D A Y + S +I P TG+++++ +D + Y + V AHD
Sbjct: 579 VTTSDEDIGVNAISRYSIMDTSLPFIINPSTGDIVISRPLNREDTDRYRIRVSAHD 634
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 87/190 (45%), Gaps = 35/190 (18%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKV 114
K+G + V SG +DRE+ + SL + A + ++G + E V V VLD ND PVFS +
Sbjct: 1136 KTGQIYV-SGLLDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND-PPVFSLNI 1193
Query: 115 YRFIVGD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLV 163
Y + + S+ +S+ V W +FS IGS + A
Sbjct: 1194 YSVQISEGVPTGTHVTFVSAFDSDSVPSWSRFSYFIGSGNENGA---------------F 1238
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDE 219
I PQTG++ +T + + + Y LTV A D +PS V L+ N P+L
Sbjct: 1239 SINPQTGQITVTAELDRETLPIYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPMLTIS 1298
Query: 220 QLLQMIDRKS 229
+ M +++S
Sbjct: 1299 EGEVMENKRS 1308
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 38/88 (43%), Gaps = 17/88 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN T NP+T +I +TS +DRE Y+LV+ A+D
Sbjct: 184 YRIIGGNSQFTI---NPSTGQI------------ITSALLDRETKENYTLVVVASDAGSP 228
Query: 90 N--KAETHVTVDVLDENDNSPVFSQKVY 115
+ T V V V D NDN P F Y
Sbjct: 229 EPLSSSTSVLVTVTDVNDNPPRFQHHPY 256
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 110/282 (39%), Gaps = 61/282 (21%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ + RYSI D + NP+T +I V S ++RE+ +Y + ++A
Sbjct: 589 NAISRYSIM---DTSLPFIINPSTGDI------------VISRPLNREDTDRYRIRVSAH 633
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
D T VT+ V D NDN+P FS+ Y +L + S V+ VSA
Sbjct: 634 DSGW--TVSTDVTIFVTDINDNAPRFSRPSYYLDCPELP-EIGSRVTQ---------VSA 681
Query: 145 TDAD---GDKVAYKLAVPSNLVVIVPQTGELL---------LTGDPPSDDVEYELTVEAH 192
TD D +V Y + S I TGE+ ++G + + V +
Sbjct: 682 TDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQVLKYQNVSGFSNVNINRHSFIVTSS 741
Query: 193 DLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRR---VTRAVR-PTK 248
D +PS + + +D AP ++ + VT+ V+ TK
Sbjct: 742 DRGNPSLLSETTVTI---------------NTVDSNDNAPQFLQTKYFTPVTKNVKVGTK 786
Query: 249 RIDFSETDGE---MEGRIVFALEKETEREKFKIRDENPWITV 287
I + D + + + + + E KFK+ + WI+V
Sbjct: 787 LIKVTAVDDKDFGLNSEVEYFILNENHLGKFKLDNNTGWISV 828
>gi|395839907|ref|XP_003792813.1| PREDICTED: protocadherin Fat 1 [Otolemur garnettii]
Length = 4588
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
Query: 23 HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVIT 82
H V Y I GN F + NP + I +T +D E + Y+L+I
Sbjct: 1692 HSQSSVIYEIKDGNIGDAFDI-NPHSGSI------------ITQKSLDFETLPIYTLIIQ 1738
Query: 83 ATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
T++ G++ T V V + DENDN PVF Q Y ++ + +S+NS V + + +
Sbjct: 1739 GTNMAGLS-TNTTVLVHLQDENDNLPVFMQAEYTGLISE-SASINSVVLTDRNVPLV--I 1794
Query: 143 SATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQ 195
ATD+D + + Y + PS I TG + +L+ D + + TV+ HD+
Sbjct: 1795 RATDSDKESNALLVYHIVEPSVHKYFAIDSNTGAIHTVLSLDYEETSI-FHFTVQVHDMG 1853
Query: 196 SPSRYAREPAQVWLQ 210
+P +A A V +
Sbjct: 1854 TPRLFAEYAANVTIH 1868
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 92/201 (45%), Gaps = 28/201 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G PI + P ++Y I G++ + F + + +R T+
Sbjct: 46 ENSAAKTYV-GHPIKMGIYITDPVWELKYKIVSGDNENLFKAEEYILGDFCFLRIRTKGG 104
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+LV+ A + ++A T V V VLD ND P+FS Y
Sbjct: 105 NTAIL------NREVKDHYTLVVKAVEKNTNSEARTKVRVQVLDTNDLRPLFSPTSYSI- 157
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ + P +G ++LT
Sbjct: 158 ------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKDRTDMFAVHPTSGVVVLT 208
Query: 176 GDPPSDDVE---YELTVEAHD 193
G D +E YE+ V A D
Sbjct: 209 GK--LDYIETQLYEMEVLAVD 227
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 13/91 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1174 LMYKITSGNPQGFFSI------------HPKTGLITTTSRKLDREQQDEHILEVTVTDNG 1221
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRF 117
K+ T V V +LDENDN P F QK Y+
Sbjct: 1222 SPPKSTITRVIVKILDENDNKPQFLQKFYKI 1252
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 48/93 (51%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYSI GN + F + +S G + VT +DRE ++ Y+L + A+D
Sbjct: 3370 IRYSIIDGNQGNPFTI------------DSVKGEVKVTRL-LDRETISGYTLTVQASDNG 3416
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+P FSQ+ Y IV
Sbjct: 3417 SPPRVNTTTVNIDVSDVNDNAPAFSQENYSLIV 3449
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 32/199 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + Y I GN++ F++ +SK+G + + +
Sbjct: 3246 GTEVLQVYAASRDIEANAEITYLIISGNEHGKFSI------------DSKTGAIFIIE-N 3292
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L + ATD ++ T V ++V D NDN+PVFSQ Y ++ + + L
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVAT-VNINVTDINDNTPVFSQDTYTTVISE-DAIL 3350
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
S+ +V A DADG + Y + N I GE+ +T +
Sbjct: 3351 E---------QSVITVMADDADGPSNSHIRYSIIDGNQGNPFTIDSVKGEVKVTRLLDRE 3401
Query: 182 DVE-YELTVEAHDLQSPSR 199
+ Y LTV+A D SP R
Sbjct: 3402 TISGYTLTVQASDNGSPPR 3420
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 77/173 (44%), Gaps = 32/173 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N I+N + + +DRE+ Y L ITATD
Sbjct: 2954 VTYFITGGDALRQFAIEN-----IQNEWK------VYVKKPLDREQKDNYLLTITATD-- 3000
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD--LKSSLNSNVSHWKKFSSIGSVSAT 145
G ++ V V VLD NDNSPV + +Y + + L L + +SAT
Sbjct: 3001 GTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPEDALPGKL------------VMQISAT 3048
Query: 146 DAD---GDKVAYKL-AVPSNLVVIVPQTGEL-LLTGDPPSDDVEYELTVEAHD 193
DAD ++ Y L + + P TGEL +LT Y L V+A D
Sbjct: 3049 DADIRSNAEITYTLFGSGAEKFKLNPDTGELKILTALDREHQAVYNLLVKATD 3101
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 87/186 (46%), Gaps = 38/186 (20%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GN++ +F + + ++G+L V S +DRE +YSL IT D+
Sbjct: 754 YAISGGNEDSSFII------------DMETGMLKVFS-PLDRETKDRYSLNITVYDLGIP 800
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVSATDA 147
KA H+ + VLD NDN P F Q+ Y F+ VS K+ +S I V ATD
Sbjct: 801 QKATWHLLDLIVLDANDNPPEFLQESY-FV----------EVSEDKEVNSEIIQVEATDK 849
Query: 148 D---GDKVAYKLAVPSNLVVIVPQTG--ELLLTGDPPSDDVEYELTVEAHDLQSPSRYAR 202
D V Y + ++ I TG +++ T D V Y L +EA D AR
Sbjct: 850 DLGPNGHVTYSILTDTDKFSIDSVTGVVKIIHTLDREVQPVHY-LKIEARD------QAR 902
Query: 203 EPAQVW 208
E Q++
Sbjct: 903 EEPQLF 908
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 23/131 (17%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
I +++ + + L +T +D KA T V V +L N N P FSQ Y K+S +
Sbjct: 426 IKKQQTSHFELEVTTSD----RKASTKVLVKILGANSNPPEFSQTAY-------KASFDE 474
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNL----VVIVPQTGELLLTGDPPSDDVE 184
NV ++I SVSA D D + Y +NL VI TG + + S++++
Sbjct: 475 NVPIG---TTIMSVSAEDPDEGENGYVTYSIANLNHVPFVIDHFTGAVSI-----SENLD 526
Query: 185 YELTVEAHDLQ 195
YEL + L+
Sbjct: 527 YELMPRVYSLR 537
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 69/150 (46%), Gaps = 19/150 (12%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYR 116
SGVL T DRE+ + +V+ T+ K A HV V V D+NDN+PVF Y
Sbjct: 2029 SGVLSTTGIPFDREQQEVFDVVVEVTEEKR-PSAVAHVVVKVTIEDQNDNAPVFVNLPYY 2087
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELL 173
+V +++ V H ++ V+A D D K V Y L + P +GE+
Sbjct: 2088 AVV-----KVDTEVDHVIRY-----VTAVDRDSGKNGEVHYYLKEHHEHFQVGP-SGEIS 2136
Query: 174 LTGDPPSDDV--EYELTVEAHDLQSPSRYA 201
L D + EY +TV A D +P+ A
Sbjct: 2137 LKKQFELDTLNKEYLITVVAKDGGNPAFSA 2166
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 106/265 (40%), Gaps = 47/265 (17%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE A Y+L++ ATD G E ++ + + D NDN P F+ Y V
Sbjct: 3085 LDREHQAVYNLLVKATDGGG-RFCEANIVLTLEDVNDNPPEFTADPYTIAV--------- 3134
Query: 129 NVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE- 184
+ + + + V ATDAD K++Y L ++ + + ++ P +++
Sbjct: 3135 -FENTEPGTPLTRVQATDADAGLNQKISYLLMNSADGQFSINELSGIIQLEKPLDRELQA 3193
Query: 185 -YELTVEAHDLQSPSRYAREPAQVW----LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRR 239
Y LTV+A D P R + + + N PV + + + + E +
Sbjct: 3194 VYTLTVKAVDQGLPRRLTATSSVIVSVLDINDNPPVFEYREYGATVSE--DILIGTEVLQ 3251
Query: 240 VTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
V A R D E I + + E KF I + I + EN D
Sbjct: 3252 VYAASR----------DIEANAEITYLIISGNEHGKFSIDSKTGAIFIIENLDY------ 3295
Query: 300 DFEELGPEKTIDFWVTINNQATNGG 324
E + ++++T+ +AT+GG
Sbjct: 3296 -------ESSHEYYLTV--EATDGG 3311
>gi|351705184|gb|EHB08103.1| Protocadherin beta-5 [Heterocephalus glaber]
Length = 789
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 63/124 (50%), Gaps = 23/124 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT TD+ K + ++TV V D NDN+P F+Q Y V +
Sbjct: 402 LVTESPLDRETSAEYNITITVTDLGTPRLKTQHNITVQVSDVNDNAPTFTQTSYTLWVPE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP---------SNLVVIVPQT 169
NS H IG++SATD D +V Y L +P ++LV I T
Sbjct: 462 ----NNSPALH------IGTISATDRDSGTNAQVTYSLLLPPPRDPHPGLASLVSINADT 511
Query: 170 GELL 173
G+L
Sbjct: 512 GQLF 515
Score = 37.4 bits (85), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D E Y++ I+ATD G++ T V ++VLD NDN+P + S+L+
Sbjct: 306 LDFEVTRYYNVEISATDGGGLSGKCT-VAIEVLDVNDNAPELTM-----------STLSR 353
Query: 129 NVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQT--GELLLTGDPPSD---D 182
++ + + S +DAD G+ ++P L ++ T L + P D
Sbjct: 354 SIPENSPETVVAIFSVSDADSGNNGKMVCSIPDKLPFVLKPTFMNFYTLVTESPLDRETS 413
Query: 183 VEYELTVEAHDLQSP 197
EY +T+ DL +P
Sbjct: 414 AEYNITITVTDLGTP 428
>gi|189053489|dbj|BAG35655.1| unnamed protein product [Homo sapiens]
Length = 787
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 53/103 (51%), Gaps = 14/103 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ K E +TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTEGALDRETRAEYNITITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN 161
NS H IGSV ATD D +V Y L P +
Sbjct: 463 ----NNSPALH------IGSVRATDRDSGTNAQVTYSLLPPQD 495
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVY 115
LV ++DREE A+ L +TA D ++ T + + VLD NDN+P F Q +Y
Sbjct: 194 LVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFVQALY 247
>gi|402872809|ref|XP_003900294.1| PREDICTED: protocadherin beta-10 [Papio anubis]
Length = 810
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 22/149 (14%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ IT TD+ K E ++TV V D NDN+P F+ Y V
Sbjct: 414 ILMTEGALDRESRAEYNITITITDLGTPRLKTEHNITVLVSDVNDNAPAFTHTSYTLFVR 473
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P + LV I G
Sbjct: 474 E----NNSPALH------IGSVSATDRDSGTNAQVTYSLLRPQDPHLPLPSLVSINADNG 523
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 524 HLFALRSLDYEALQAFEFRVGATDRGSPA 552
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
LV +DREE + SL +TA D ++ T + + VLD NDN+P F+Q +Y
Sbjct: 206 LVLDKALDREEQGELSLTLTALDGGSPPRSGTSTIGIVVLDVNDNAPQFAQALY 259
>gi|348520342|ref|XP_003447687.1| PREDICTED: protocadherin-12 [Oreochromis niloticus]
Length = 1166
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYR 116
++VTSG +DRE+V QY++ + A D + H+ V VLDENDN+PVFS +YR
Sbjct: 408 MIVTSGSLDREKVMQYNITLFARDSGNPLLSCVEHLPVYVLDENDNAPVFSTPIYR 463
>gi|296192969|ref|XP_002744301.1| PREDICTED: protocadherin beta-2 isoform 1 [Callithrix jacchus]
Length = 798
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/151 (36%), Positives = 72/151 (47%), Gaps = 28/151 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV S +DRE ++Y++ IT TD+ + E ++TV V D NDN+P F+Q Y V +
Sbjct: 405 LVLSTALDRETRSEYNVTITVTDLGTPRLRTEHNITVLVSDVNDNAPAFTQTSYTLFVRE 464
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 465 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGH 514
Query: 172 LLLTGDPPSDDVE----YELTVEAHDLQSPS 198
L PS D E +E V A D SP+
Sbjct: 515 LFAL---PSLDYEALQAFEFRVGATDRGSPA 542
>gi|262263257|tpg|DAA06560.1| TPA_inf: protocadherin alpha 1 unspliced isoform [Anolis
carolinensis]
Length = 792
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 78/149 (52%), Gaps = 17/149 (11%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKV 114
+ S ++LV + +DRE++ + L++TA D T H+ V V+D NDN+P F+Q +
Sbjct: 188 QHSSPLVLVLNKPLDREKIPVHHLLLTAVDEGQPELTGTAHLDVTVMDANDNAPAFNQSI 247
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV--PSNLVVIVPQT 169
Y+ V L++ LN + + ++ATD D ++Y + PSN+ I T
Sbjct: 248 YK--VKLLENVLNGTL--------VIKLNATDLDEGINKDISYSFSNNDPSNIFSIQSDT 297
Query: 170 GELLLTGDPPSDDVE-YELTVEAHDLQSP 197
GE+ + G +D+ Y + VEA D SP
Sbjct: 298 GEIRVKGKVDFEDISVYNIEVEAKDKGSP 326
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 16/91 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YS + + ++ F++++ T EIR G +D E+++ Y++ + A D K
Sbjct: 278 ISYSFSNNDPSNIFSIQS-DTGEIR------------VKGKVDFEDISVYNIEVEAKD-K 323
Query: 88 GINKAETHVT--VDVLDENDNSPVFSQKVYR 116
G H T V++LD NDN+P S K+ R
Sbjct: 324 GSPPLSGHCTILVEILDMNDNAPELSLKLMR 354
>gi|167536805|ref|XP_001750073.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771402|gb|EDQ85069.1| predicted protein [Monosiga brevicollis MX1]
Length = 10110
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 111/262 (42%), Gaps = 63/262 (24%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
++YSI GN FA+ + TT EIR + +DRE Y L + A D
Sbjct: 5565 IKYSIRAGNAAGRFAI-DATTGEIR------------VAQVLDRETTPGYVLTVRADD-- 5609
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ A+T VT+ V D NDNSPVF + Y + + + S + VSATDA
Sbjct: 5610 SVQLAQTSVTITVTDVNDNSPVFVRPTYSTAIAE----------SAPENSPVLQVSATDA 5659
Query: 148 D---GDKVAYKLAVPSNLV----VIVP-------------QTGELLLTGDPPSDDVE-YE 186
D +++Y+LA + L+ +VP TG++ +T + V Y+
Sbjct: 5660 DVGLNARLSYELAGSTMLLTATNAVVPFDNASTLPFAINASTGQITVTAALDRETVSRYD 5719
Query: 187 LTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRK---SEAPHRIEKRRVTRA 243
L A D +P R N+ L + + DR ++A + + R T A
Sbjct: 5720 LVALARDAGTPQR------------NATALVTVNVRDVNDRAPVFAQAMYTLSLPRETLA 5767
Query: 244 VRPTKRIDFSETDGEMEGRIVF 265
PT ++ S +D ++ + +
Sbjct: 5768 --PTALVNVSASDADLNSVLTY 5787
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 116/284 (40%), Gaps = 51/284 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYS+ N +FA+ N TT I +D E+ +Y TA D+
Sbjct: 577 IRYSL---NGTASFAI-NATTGVIH------------ALAPLDYEQTQKYVFTATAADLG 620
Query: 88 GINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+ A T VT++V + NDN PVF Y V +S+L + V I VSATD
Sbjct: 621 TPPRFATTTVTINVQNVNDNVPVFGAASYAVNVS--ESTLKNTV--------ILLVSATD 670
Query: 147 AD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSPSRYA 201
AD D V + + S + +GEL L G + D E Y +T+ D SP Y+
Sbjct: 671 ADILDSVRFSIQTASVPFAVGQTSGELSLAG---TLDYELRTSYNITLRVTDTGSPPLYS 727
Query: 202 REPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEG 261
QV + VL + +S +E VT +P R+ S TDG++
Sbjct: 728 E--VQVLIS----VLDENDNAPRFGAESYQTSVLESVNVT---QPLLRV--SATDGDLPA 776
Query: 262 RIVFALEKETEREKFKIRDENPWITVDE-NGDVRVKKRWDFEEL 304
+ E F D N TVD G + + D+E +
Sbjct: 777 TANGQVRYELYNALFS--DTN--FTVDAITGQIYATRALDYETV 816
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 18/177 (10%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+ + D+DRE + +Y L++TA+ G+ ++ VTV + D ND PVF+ + R
Sbjct: 3231 LVTVNADLDRETIKEYDLIVTASTSTGVEDTKS-VTVHLADRNDFPPVFAVNLTR----- 3284
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKL-AVPSNLVVIVPQTGEL-----LLT 175
+S+ NV+ + +++ + A D ++Y + A + + + G + L
Sbjct: 3285 --ASIVENVATAETVATVVATDADDCSSCMLSYSITAGNAGGTFAIDEQGRITRVQALCA 3342
Query: 176 GDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
D P+ + L + A D SP+ A V + P + + D+ E P
Sbjct: 3343 ADRPT----FTLQITASDGGSPALTATTIVIVAVTAAPPNTNTAPVFIIADQALEIP 3395
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 21/152 (13%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG-INKAE 93
N ++L+N T R + + SG L T+G +DRE A Y LV+ A+ + + +A
Sbjct: 5351 ANAGIVYSLEN--TFSGRFTINASSGAL-STTGPLDREAQAAYRLVVVASSIMPPLQEAT 5407
Query: 94 THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----- 148
V V VLD+NDN PV Y ++ + N+ V I ++ATDAD
Sbjct: 5408 LDVYVTVLDKNDNHPVLQSTEYSIVLPE-----NAAVGTL-----ILQLNATDADEPGQP 5457
Query: 149 GDKVAYKL--AVPSNLVVIVPQTGELLLTGDP 178
++AY L NL + TG L + P
Sbjct: 5458 NSQIAYALIDGNTENLFALDTTTGALTVAISP 5489
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 40 TFALKNPT-THEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTV 98
TFAL P E+ + SG LL+ S +DRE +Y+L +TATD+ G A V V
Sbjct: 2368 TFALAEPFEPFEM----DGTSGTLLLRS-PLDRETQDRYALNVTATDLVGRTSA-VLVNV 2421
Query: 99 DVLDENDNSPVFSQKV 114
V D NDN+PVF++ V
Sbjct: 2422 TVTDLNDNAPVFNESV 2437
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 98/220 (44%), Gaps = 40/220 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L +G +D E Y++ + TD +E V + VLDENDN+P F + Y+
Sbjct: 697 LSLAGTLDYELRTSYNITLRVTDTGSPPLYSEVQVLISVLDENDNAPRFGAESYQ----- 751
Query: 122 LKSSLNS-NVSHWKKFSSIGSVSATDAD-----GDKVAYKL--AVPSNLVVIVPQ-TGEL 172
S L S NV+ + VSATD D +V Y+L A+ S+ V TG++
Sbjct: 752 -TSVLESVNVTQ-----PLLRVSATDGDLPATANGQVRYELYNALFSDTNFTVDAITGQI 805
Query: 173 LLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKS-- 229
T + V+ Y TV+AHDL SP R +SPV+ L+ ++ +
Sbjct: 806 YATRALDYETVQRYFFTVQAHDLGSPRR------------SSPVINVTILVINVNDNAPL 853
Query: 230 --EAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFAL 267
+AP+ T T + + TD ++E + F++
Sbjct: 854 FVDAPYSANISEATSI--GTAVLAVAATDADLEQTLSFSI 891
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 105/275 (38%), Gaps = 53/275 (19%)
Query: 69 IDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
D E Y+ + A D+ + V + V D NDN+P F Y
Sbjct: 396 FDYEAQQSYTFGVYAHDLGSPQRTTRVSVAITVTDVNDNTPQFQAPNYAV---------- 445
Query: 128 SNVSHW-KKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE- 184
+VS W ++I ++SATDAD D V + L S + TG+L + G + D E
Sbjct: 446 -SVSEWTASGAAIVNLSATDADLHDTVLFSLRTTSVPFGVDQNTGQLSVAG---TLDYET 501
Query: 185 ---YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVT 241
Y LTV D SPSR+ A W+ L+ ++D AP T
Sbjct: 502 RQSYNLTVRVSDTGSPSRH----ADTWV-----------LVTILDENDHAPIFGALNGYT 546
Query: 242 RAVR-----PTKRIDFSETDGEM----EGRIVFALEKETEREKFKIRDENPWITVDENGD 292
AV + S TDG++ G+I ++L F I I D
Sbjct: 547 VAVAEDVNVANPLLTLSATDGDLPTTANGQIRYSLNGT---ASFAINATTGVIHALAPLD 603
Query: 293 VRVKKRWDF----EELG-PEKTIDFWVTINNQATN 322
+++ F +LG P + VTIN Q N
Sbjct: 604 YEQTQKYVFTATAADLGTPPRFATTTVTINVQNVN 638
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 36/194 (18%)
Query: 16 LVASSHKHPHQLVRYSITQGNDNHTFALK--NPTTHEIRNSTESKSGVLLVTSGDIDREE 73
VA+ + +S+ +D FA+ P T E+R L+ + +DRE
Sbjct: 2989 FVAADEDCTSATLNFSLVNASDASYFAVVPVAPQTAELR----------LIKA--VDREV 3036
Query: 74 VAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHW 133
S + D G + + V VLD NDN+P F+Q+ RF +++S
Sbjct: 3037 TQTLSATLAVFD--GATAIASTLVVTVLDANDNAPAFAQR--RF---------ETDLSEA 3083
Query: 134 KKFSSIGSVSATDADGDK---VAYKLAV--PSNLVVIVPQTGELLLTGD--PPSDDVE-Y 185
+++ S+ ATDAD + + Y ++ P+N + +TG LL T SD +E Y
Sbjct: 3084 APGTNVLSLVATDADAGQNAEIVYSISSGDPNNDFALDNETG-LLTTARLICLSDAIEAY 3142
Query: 186 ELTVEAHDLQSPSR 199
L V A D PS+
Sbjct: 3143 NLVVAAADRGIPSQ 3156
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 16/136 (11%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE+V +SL + +D G + T V + V D NDNSP+F Q VY +
Sbjct: 4864 VDREDVPLWSLTVRVSDDAGRSSTVT-VHLSVTDINDNSPLFGQNVYT----------AA 4912
Query: 129 NVSHWKKFSS-IGSVSATDAD-GDKVA--YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE 184
N+ + + +V A+D D G A Y P+++ + TG + L +D
Sbjct: 4913 NLPERTAVGTRVATVQASDRDTGLNAALHYFFLTPTSVFTLNETTGVVSLAQTVCADIRS 4972
Query: 185 -YELTVEAHDLQSPSR 199
YEL V A D P+R
Sbjct: 4973 IYELQVVAQDQGVPAR 4988
>gi|195429581|ref|XP_002062836.1| GK19483 [Drosophila willistoni]
gi|194158921|gb|EDW73822.1| GK19483 [Drosophila willistoni]
Length = 3590
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 78/156 (50%), Gaps = 22/156 (14%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK----AETHVTVDVLDENDNSPVFS 111
+S+SGV+ T +DRE Y+LV+TA+D+ A V V VLD+NDN P FS
Sbjct: 518 DSRSGVI-STRSSLDRETSDSYNLVVTASDMASAQSERKTATASVLVKVLDDNDNYPQFS 576
Query: 112 QKVYRFIVGDLK--SSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAV----PSNLVV 164
++ Y V + + SS ++ V+H + ATDAD G+ A + A+ +
Sbjct: 577 ERTYTVQVPEDQWGSSEDNTVAH---------IRATDADQGNNAAIRYAIIGGNTQSQFS 627
Query: 165 IVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSR 199
I +G++ L + V Y L + A D SPSR
Sbjct: 628 IDSMSGDVSLVKPLDYESVRSYRLVIRAQDGGSPSR 663
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 25/153 (16%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV-AQYSLVITATD 85
+V YSI G+D++ F+L R +E L+T ++D E ++ LV+ A
Sbjct: 1141 VVHYSIIGGDDSNAFSLVT------RPGSERAQ---LLTMTELDYESSRKRFELVVRAAS 1191
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
N A H+ + V D NDN+PV D + N+ H+ IG + A
Sbjct: 1192 PPLRNDA--HIEILVTDVNDNAPVLR---------DFQVIFNNFRDHFPS-GEIGRIPAF 1239
Query: 146 DAD-GDKVAYKLAVP--SNLVVIVPQTGELLLT 175
DAD DK+ Y++ +NLV + +G L+L+
Sbjct: 1240 DADVSDKLNYRILSGNNANLVRLNSTSGGLILS 1272
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 39/181 (21%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
+VT+ +DRE + Y L +TA D + ++T V + V D NDN+P+F +Y+ +
Sbjct: 953 IVTNAPLDRETTSGYLLTVTAKDGGNPSLSDTTDVEISVTDVNDNAPMFKNPLYQSSI-- 1010
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA---VPSNLVVIVPQTGELL-- 173
L+ +L +S+ VSA+D D ++ Y L+ V VI P +G +
Sbjct: 1011 LEDALVG--------TSVIQVSASDPDIGLNGRIKYLLSDRDVEDGSFVIDPTSGTIRTN 1062
Query: 174 ------------LT------GDPP-SDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSP 214
LT G PP S VE ++ +E + SP +A + +++ NSP
Sbjct: 1063 KGLDRESVAIYHLTAIAVDKGSPPLSSTVEVQIRLEDVN-DSPPTFASDKITLYVPENSP 1121
Query: 215 V 215
V
Sbjct: 1122 V 1122
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 72/153 (47%), Gaps = 29/153 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI++ +DN A+ +P T ++ T +DREE ++++ + A D
Sbjct: 718 ISYSISERDDNFPLAV-DPRTGWVQ------------TIKQLDREEQSRFTFQVVAKD-G 763
Query: 88 GI--NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G+ A + V + V D NDN P F+ K Y VG+ + + + +V+AT
Sbjct: 764 GVPPKSASSSVVITVQDVNDNDPNFNPKYYEANVGEDQ----------PPGTPVTTVTAT 813
Query: 146 DADGD-KVAYKLAVPS--NLVVIVPQTGELLLT 175
D D D ++ Y+++ + I Q G L+T
Sbjct: 814 DPDEDSRLHYEISTGNTRGRFAITSQNGRGLIT 846
>gi|114663325|ref|XP_001167910.1| PREDICTED: cadherin-3 isoform 3 [Pan troglodytes]
Length = 784
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 252 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 303
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+PVF + Y
Sbjct: 304 DGDGSTTTAVAVVEILDANDNAPVFDPQKY 333
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 26/156 (16%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DREE+A+Y L A G + + ++++ V D+ND+ P F Q
Sbjct: 159 AVEKETGWLLLNK-PLDREEIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFIQ 217
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAV-----------PSN 161
+R V L+ L +S+ V+ATD D Y V P +
Sbjct: 218 DTFRGRV--LEGVLPG--------TSVMQVTATDEDDAIYTYNGVVAYSIHSQEPKDPHD 267
Query: 162 LVVIVPQ---TGELLLTGDPPSDDVEYELTVEAHDL 194
L+ + + T ++ +G EY LT++A D+
Sbjct: 268 LMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 303
>gi|402871012|ref|XP_003899484.1| PREDICTED: protocadherin Fat 1-like [Papio anubis]
Length = 1188
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + HP VRY I G+ + F + + +R T+
Sbjct: 45 ENSAAKTYV-GHPVKMGIYMTHPSWEVRYKIVSGDSENLFKAEEYVLGDFCFLRIRTKGG 103
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A T V V VLD ND P+FS Y
Sbjct: 104 NTAIL------NREVKDHYTLIVKAVEKNTNMEARTKVRVQVLDTNDLRPLFSPTSYSV- 156
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 157 ------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGVIVLT 207
Query: 176 G 176
G
Sbjct: 208 G 208
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 84/185 (45%), Gaps = 36/185 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GN++ F + + ++G+L + S +DRE +Y+L IT D+
Sbjct: 754 YAISGGNEDSCFMI------------DMETGMLKILS-PLDRETTDKYTLNITVYDLGIP 800
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
KA + V V+D NDN P F Q+ Y V + K + S I V ATD D
Sbjct: 801 QKAAWRLLDVVVVDANDNPPEFLQESYFVEVSEDK----------EVHSEIIQVEATDKD 850
Query: 149 ---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYE--LTVEAHDLQSPSRYARE 203
V Y + ++ I TG + +T P ++++E L +EA D ARE
Sbjct: 851 LGPNGHVTYSILTDTDKFSIDSATGVVKIT-HPLDRELQHEHYLKIEARD------QARE 903
Query: 204 PAQVW 208
Q++
Sbjct: 904 EPQLF 908
>gi|344280988|ref|XP_003412263.1| PREDICTED: protocadherin-16 [Loxodonta africana]
Length = 2693
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 73/154 (47%), Gaps = 23/154 (14%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+G +D E+ Y L + A D G ++ ++TV V D NDN+P FSQ +Y+ +
Sbjct: 1729 TGPLDFEQHNHYYLQLLAHD--GPHEGRANLTVFVEDVNDNAPAFSQSLYQVTL------ 1780
Query: 126 LNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDD 182
+ H S+I SVSATD D ++Y LA P + P G L +T + D
Sbjct: 1781 ----LEHTPPGSAILSVSATDRDSGANGLISYHLASPDEGFSVDPNNGTLFITVG--TVD 1834
Query: 183 VEYE------LTVEAHDLQSPSRYAREPAQVWLQ 210
+ E + +EA D +P R A+ V LQ
Sbjct: 1835 LGQEGPGVVDVVLEARDHGTPGRAAQATVYVQLQ 1868
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 86/204 (42%), Gaps = 20/204 (9%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN SGT V + P+ + YS+ Q +++ +P T E+
Sbjct: 511 ENQPSGTSVGR--VSATDRDSGPNGRLTYSLRQLSEDSKAFRIHPQTGEV---------- 558
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
T +DRE + Y L++ D ++ T V + VLD NDNSP F Q G
Sbjct: 559 --TTLQTLDRERQSSYQLLVQVQDGGNPPRSTTGTVHIAVLDLNDNSPTFLQ-ASGAAGG 615
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGELLLTGDP- 178
L + V +++ + + + + Y L P + L + P +GE LLT P
Sbjct: 616 GLPIQVPDGVLPGTLVTTLQAKDPDEGENGTILYTLTGPGAELFSLHPHSGE-LLTAAPL 674
Query: 179 -PSDDVEYELTVEAHDLQSPSRYA 201
++ Y LT+ AHD SP R A
Sbjct: 675 IRAERPHYVLTLSAHDQGSPPRSA 698
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV-LLVTSGDIDREEVAQYSLVITA 83
H V YSI GN F L+ + LV +D E + QY+L + A
Sbjct: 1910 HAAVDYSIVSGNRGRVFQLEPRLAEAGEGGGPGPQALGCLVLLEPLDFESMTQYNLTVAA 1969
Query: 84 TD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
D + + VTV VLD NDN PVF++ Y V
Sbjct: 1970 ADRGQPPRSSAVPVTVIVLDVNDNPPVFTRASYHMAV 2006
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y + G D H F L S +G L V +DRE+ A++ L + A+D
Sbjct: 975 VSYRLASGGDGH-FRL------------HSSTGALSVVR-PLDREQRAEHVLTVVASDHG 1020
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIV 119
+++ T + TV V D ND +P F Q+ YR ++
Sbjct: 1021 SPSRSATQLLTVSVADVNDEAPAFQQQEYRVLL 1053
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 13/87 (14%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LVR++++ G+ F L ES + L +D E A++ LV+ A
Sbjct: 2028 PHGLVRFTLSSGDPLGLFELD-----------ESTGALHLARP--LDCETQARHQLVVQA 2074
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVF 110
D G + A VT++V D ND+SP F
Sbjct: 2075 ADPAGAHFALAPVTIEVEDVNDHSPAF 2101
>gi|79158861|gb|AAI07999.1| Pcdh1g18 protein [Danio rerio]
Length = 868
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 20/141 (14%)
Query: 46 PTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVL 101
PT H ++N+ + V +V +DRE+ +SL++TA D ++ T H+ + +L
Sbjct: 155 PTDHFKLNVQNAEDGSKNVEIVLHSPLDREKKNHHSLILTAFDGGKPQRSATLHINIIIL 214
Query: 102 DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLA 157
D NDN+PVFSQ Y+ S V + K + + VSATDAD G + ++ A
Sbjct: 215 DVNDNAPVFSQSSYK----------TSIVENAPKSTVVIRVSATDADESSHGIQYYFEHA 264
Query: 158 VPS--NLVVIVPQTGELLLTG 176
P+ L I +G++ +TG
Sbjct: 265 TPTVKALFSIDADSGDVKVTG 285
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 18/185 (9%)
Query: 27 LVRYSITQGNDN-----HTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVI 81
++R S T +++ + F PT + S ++ SG + VT G ID E+ Q+ + +
Sbjct: 242 VIRVSATDADESSHGIQYYFEHATPTVKALF-SIDADSGDVKVT-GQIDYEKHKQFKIKV 299
Query: 82 TATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
A D G+ + + + +DV+D NDN P + + S+++ + + + I
Sbjct: 300 KAKDHGGLTDS-SEIIIDVIDVNDNKP-------KITIMSFSSAVSEDAAPGTVIAMINV 351
Query: 142 VSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSPS 198
D K++ + + S +I T L D D EY +T+ A D +P
Sbjct: 352 QDLDSGDNSKISCSIDLNSPFKIISSLTNYYNLVTDSELDREQTAEYNITITAVDGGNPP 411
Query: 199 RYARE 203
+E
Sbjct: 412 LSVKE 416
>gi|24416520|gb|AAH38797.1| Protocadherin beta 15 [Homo sapiens]
gi|123993279|gb|ABM84241.1| protocadherin beta 15 [synthetic construct]
gi|124000241|gb|ABM87629.1| protocadherin beta 15 [synthetic construct]
Length = 787
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 53/103 (51%), Gaps = 14/103 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT TD+ K E +TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTEGALDRETRAEYNITITITDLGTPRLKTEQSITVLVSDVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN 161
NS H IGSV ATD D +V Y L P +
Sbjct: 463 ----NNSPALH------IGSVRATDRDSGTNAQVTYSLLPPQD 495
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVY 115
LV ++DREE A+ L +TA D ++ T + + VLD NDN+P F Q +Y
Sbjct: 194 LVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFVQALY 247
>gi|402872807|ref|XP_003900293.1| PREDICTED: protocadherin beta-17-like [Papio anubis]
Length = 796
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 14/103 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
++T G +DRE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 404 VLTEGALDRESWAEYNITITVTDLGTPRLKTEYNITVRVSDINDNAPAFTQTSYTLFVRE 463
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN 161
NS H IGSVSATD D +V Y L P +
Sbjct: 464 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQD 496
Score = 44.3 bits (103), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 80/173 (46%), Gaps = 28/173 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ + H F RN ++ K LV +DREE Q L +TA D
Sbjct: 171 YTISTNSYFHLFT---------RNHSDGKKYPELVLDQALDREEQPQLRLTLTALDGGSP 221
Query: 90 NKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ T HV + ++D NDN P F+Q++Y V + N+ + S + +VSA D D
Sbjct: 222 PRIGTSHVLIVIVDINDNVPEFTQRLYEVQVPE-----NAPIG-----SLVITVSARDLD 271
Query: 149 G---DKVAYKLAVPSNLVV----IVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
+++Y SN ++ I TGE+ L ++++ Y + VEA D
Sbjct: 272 AGTHGELSYSFFQYSNQIIQAFEINSITGEIRLKKALDFEEIQSYHMEVEASD 324
>gi|397518006|ref|XP_003829191.1| PREDICTED: protocadherin beta-3 [Pan paniscus]
Length = 796
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV+ G +DRE ++Y++ IT TD+ K + +VTV V D NDN+P F+Q Y V +
Sbjct: 403 LVSEGALDRETRSEYNITITITDLGTPRLKTKYNVTVLVSDVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P S+LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLSSLVSINADNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 LFALRSLDYEALQAFEFRVGATDRGSPA 540
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + SL +TA D ++ T + + VLD NDN+P F+Q +Y V
Sbjct: 194 LVLDKALDREEQPELSLTLTALDGGSPPRSGTAQINIQVLDINDNAPEFAQPLYEVAV-- 251
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + +S I +VSA+D D
Sbjct: 252 --------LENTPVYSVIVTVSASDLD 270
>gi|403290566|ref|XP_003936384.1| PREDICTED: cadherin-3 isoform 1 [Saimiri boliviensis boliviensis]
Length = 829
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 252 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVVSSGLDREKVPEYTLTIQATDM 303
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+PVF + Y
Sbjct: 304 DGDGSTTTGVAVVEILDANDNAPVFDPQKY 333
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DREE+A+Y L A G + + ++++ V D+ND+ P F+Q
Sbjct: 159 AVEKETGWLLLNK-PLDREEIAKYELFGYAVSENGSSVEHPMNISIIVTDQNDHKPKFTQ 217
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
++R V L+ L +S+ V+ATD D
Sbjct: 218 DIFRGSV--LEGVLPG--------TSVMQVTATDED 243
>gi|397487016|ref|XP_003814610.1| PREDICTED: cadherin-3 isoform 2 [Pan paniscus]
Length = 784
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 252 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 303
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+PVF + Y
Sbjct: 304 DGDGSTTTAVAVVEILDANDNAPVFDPQKY 333
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 72/156 (46%), Gaps = 26/156 (16%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DREE+A+Y L A G + + ++++ V D+ND+ P F Q
Sbjct: 159 AVEKETGWLLLNK-PLDREEIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFIQ 217
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAV-----------PSN 161
+R V L+ L +S+ V+ATD D Y V P +
Sbjct: 218 DTFRGSV--LEGVLPG--------TSVMQVTATDEDDAIYTYNGVVAYSIHSQEPKDPHD 267
Query: 162 LVVIVPQ---TGELLLTGDPPSDDVEYELTVEAHDL 194
L+ + + T ++ +G EY LT++A D+
Sbjct: 268 LMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 303
>gi|444713185|gb|ELW54093.1| Protocadherin beta-11 [Tupaia chinensis]
Length = 694
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 92/199 (46%), Gaps = 37/199 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
L T +DRE A+Y++ IT TD+ H +TV V D NDN+P F+Q Y +V +
Sbjct: 404 LETKATLDRESQAEYNITITVTDLGTPRLTTEHSITVLVSDVNDNAPAFTQASYTLLVRE 463
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IG++SATDAD +V Y L P ++LV I G+
Sbjct: 464 ----NNSPALH------IGTISATDADAGTNAQVTYSLLPPHDPQLALASLVSINADNGQ 513
Query: 172 LLLTGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ--- 220
L S D E +E V A D SP+ ++ +V + N+P VL Q
Sbjct: 514 LFALR---SLDYEALRAFEFGVRAADRGSPALSSQALVRVLVLDANDNAPFVLYPLQNGS 570
Query: 221 --LLQMIDRKSEAPHRIEK 237
+++ R +EA + + K
Sbjct: 571 APCTELVPRAAEAGYLVTK 589
>gi|440902766|gb|ELR53515.1| Protocadherin Fat 4 [Bos grunniens mutus]
Length = 4963
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 85/184 (46%), Gaps = 39/184 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+ YS+ +GN+ FA+ +S SG V L+ G +D E YSLVI A D
Sbjct: 1226 LIHYSVIKGNEERQFAI------------DSTSGQVTLI--GRLDYEATPAYSLVIQAVD 1271
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
++ T + +D+LDENDN+P F ++ ++ +++ + SV+A
Sbjct: 1272 SGAVSLNSTCTLNIDILDENDNTPSFKSTLFVDVLENMRIG-----------ELVSSVTA 1320
Query: 145 TDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQ 195
TD+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1321 TDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQG 1377
Query: 196 SPSR 199
P R
Sbjct: 1378 RPPR 1381
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 35/193 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+RYSI+ GN+ FA+ S +GVL + +D E ++ + ++ATD
Sbjct: 3106 LIRYSISSGNEEGIFAIN------------SSTGVLTLAKA-LDYELCQKHEMTVSATDG 3152
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+++ VTV+V+D NDNSPVF Y V + + +++ ++AT
Sbjct: 3153 GWVSRTGYCSVTVNVIDVNDNSPVFLPDEYFPTV----------LENAPSGTTVIHLNAT 3202
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
DAD +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 3203 DADSGTNAVIAYTIQSSDSDLFVIDPNTGVVTTQG---FLDFETKQSYHLTVKAFNVPDE 3259
Query: 198 SRYAREPAQVWLQ 210
R + + L+
Sbjct: 3260 ERCSFATVNIQLK 3272
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
++YSI+ G+ + R ++SGV+ T +DREE Y L I ATD
Sbjct: 706 IKYSISAGDRS-------------RFQVNAQSGVI-STRMALDREEKTAYQLQIVATDGG 751
Query: 88 GINKA-ETHVTVDVLDENDNSPVFSQKVYRFI----------VGDLKSS---LNSNVSHW 133
+ + VT+ VLD DN PVFSQ Y F+ VG + +S LNSN+S+
Sbjct: 752 NLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFENVALGYHVGSVSASTMDLNSNISYL 811
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 89/175 (50%), Gaps = 29/175 (16%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN H+F++ N T EIR+ +DRE+++QY L++ +
Sbjct: 2682 PNGQLDYEIINGNKEHSFSI-NHATGEIRSIRP------------LDREKISQYVLIVKS 2728
Query: 84 TDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
+D +++ + V +++LDENDN+P FSQ ++ V + NS + + ++ V
Sbjct: 2729 SDRGSPSQSTSVKVIINILDENDNAPRFSQ-IFSAHVPE-----NSPLGY-----TVTRV 2777
Query: 143 SATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
+ +D D A Y + S I P TG+++++ +D + Y + V AHD
Sbjct: 2778 TTSDEDIGVNAISRYSIMDTSLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2832
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ Y+L + ATD KG + T V V VLD NDN+PVF+Q +Y+
Sbjct: 2090 TGELDREEVSNYTLTVVATD-KGHPSLSSSTEVVVMVLDINDNNPVFAQAMYK 2141
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 84/188 (44%), Gaps = 26/188 (13%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I QGN+ F L N + + + LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIIQGNEAGRFRLD-----ITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KGE 227
Query: 90 NKAETH--VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
K + V V V D NDN PVF Y+ V + ++ V SS+ V+A DA
Sbjct: 228 PKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE-----DAAVG-----SSVLQVAAADA 277
Query: 148 D---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSPSRYA 201
D + ++L + P+TG L+T P D +Y LTV+A D PS
Sbjct: 278 DEGTNADIRFRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTVQAMDRGVPSLTG 335
Query: 202 REPAQVWL 209
R A + L
Sbjct: 336 RAEALIQL 343
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 71/174 (40%), Gaps = 29/174 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ T L T+ IDREE + Y L + A+
Sbjct: 808 ISYLITTGDQKGMFAINQVTGQ-------------LTTASVIDREEQSFYQLKVVAS--G 852
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G ++ V + V D NDNSP F Q V S+N V +W+ SI A D
Sbjct: 853 GTVTGDSMVNITVKDLNDNSPHFLQAV---------ESVNV-VENWQAGHSIFQAKAVDP 902
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSP 197
D V Y L P NL I + G + L G Y++ + A D+ P
Sbjct: 903 DEGVNGMVLYSLKQNPKNLFTINERNGNISLLGPLDVHAGSYQIEILASDMGVP 956
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1735 GDGSKIMQLTAMDADEGANALVTYTIISGADD-SFRI------------DPESGDLIATK 1781
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND++P FS+ VY F
Sbjct: 1782 -RLDRERRSKYSLLVRADD--GLQSSDMRINITVSDVNDHTPKFSRPVYSF 1829
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + A + + VRY I GN N F + +S +G
Sbjct: 2146 ENTLTGTDIT--QVFAADGDEGTNGQVRYGIVDGNANQEFRI------------DSVTGA 2191
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
+ V +DRE+ YSL + ATD + +T V++ +LD ND P+F Y
Sbjct: 2192 ITVAK-PLDREKTPTYSLTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPY 2245
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 35/177 (19%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKV 114
K+G + V SG +DRE+ + SL + A + ++G + E V V VLD ND PVFS +
Sbjct: 3334 KTGQIYV-SGLLDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND-PPVFSLNI 3391
Query: 115 YRFIVGD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLV 163
Y + + S+ +S+ V W +FS IGS + A
Sbjct: 3392 YSVQISEGVPTGTHVTFVSAFDSDSVPSWSRFSYFIGSGNENGA---------------F 3436
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
I PQTG++ +T + + + Y LTV A D +PS V L+ N P+L
Sbjct: 3437 SINPQTGQITVTAELDRETLPIYNLTVLAVDSGTPSATGSASLLVILEDINDNGPML 3493
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 31/176 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y + GN+++ F L S SG L VT +DRE + L+ITATD
Sbjct: 2276 LSYVLFGGNEDNAFTL-------------SASGELRVTQ-SLDRETKEHFVLLITATD-S 2320
Query: 88 GINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G T++V+ D NDN P F+ K+Y + + + + V+A+
Sbjct: 2321 GFPALTGTGTINVIVDDINDNVPTFASKMYFTTIPE----------DAPTGTDVILVNAS 2370
Query: 146 DADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSP 197
D D ++Y++ ++ I P TG+++ + + E Y L V A D SP
Sbjct: 2371 DIDASTNAVISYRIIGGNSQFTINPSTGQIITSALLDRETKENYTLVVVASDAGSP 2426
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 26 QLVRYSITQGN--DNHT--FALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVI 81
+L+ T G+ DN T F+L+ T + + SG L S +DREE A YSL++
Sbjct: 583 ELLVLGATDGDLGDNGTVRFSLQEAETDQRSFRLDPVSGRLSTIS-SLDREEQAFYSLLV 641
Query: 82 TATDVKGINKAE-THVTVDVLDENDNSPVF 110
ATD+ ++ + V +LD NDNSPVF
Sbjct: 642 LATDLGSPPQSSMVRINVSLLDINDNSPVF 671
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 53/118 (44%), Gaps = 23/118 (19%)
Query: 2 ENSKSGTGVKGLPILVASSH--KHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKS 59
E++ +GT V ILV +S + ++ Y I GN T NP+T +I
Sbjct: 2356 EDAPTGTDV----ILVNASDIDASTNAVISYRIIGGNSQFTI---NPSTGQI-------- 2400
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVY 115
+TS +DRE Y+LV+ A+D + T V V V D NDN P F Y
Sbjct: 2401 ----ITSALLDRETKENYTLVVVASDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPY 2454
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 114/276 (41%), Gaps = 46/276 (16%)
Query: 30 YSITQGND--NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+++T +D N A + + T K+GVL V +DRE + Y+LV+ D+
Sbjct: 1947 FNVTDADDGINSQLAYSIASGDSLGQFTVDKNGVLKVLK-PLDRESQSFYNLVVQVHDLP 2005
Query: 88 GINKAE----THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV- 142
+ + +++ +LD NDN P F L+ +++ + + I ++
Sbjct: 2006 QLPASRFTSTAQISIILLDVNDNPPTF---------------LSPKLTYIPENTPIDTIV 2050
Query: 143 ---SATDADG---DKVAYKLAVPS-NLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDL 194
ATD D + Y L PS N I GE+ LTG+ ++V Y LTV A D
Sbjct: 2051 FKAQATDPDSGPNSYIEYTLLNPSGNKFTIGTIDGEVRLTGELDREEVSNYTLTVVATDK 2110
Query: 195 QSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRID 251
PS + V + N+PV ++A +++E T ++
Sbjct: 2111 GHPSLSSSTEVVVMVLDINDNNPVF------------AQAMYKVEINENTLTGTDITQVF 2158
Query: 252 FSETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
++ D G++ + + ++F+I ITV
Sbjct: 2159 AADGDEGTNGQVRYGIVDGNANQEFRIDSVTGAITV 2194
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 30/147 (20%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN++ GT V L + A S + + I GN+ F E+++S +
Sbjct: 369 ENAQVGTVVALLTVTDADS-PAANGNISVQILGGNEQRHF--------EVQSSKVPNLSL 419
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+ V S +DRE + Y+L ++ +D+ + V D ND+ PVF+Q+VYR + +
Sbjct: 420 IKVASA-LDRERIPSYNLTVSVSDL----------VIFVNDINDHPPVFAQQVYRVNLSE 468
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
S + VSATD D
Sbjct: 469 ----------EAPPGSYVSGVSATDGD 485
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 27/123 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
+ YSI +GN F + G L + S ++DRE +Y L++ A+D
Sbjct: 1013 IAYSIAEGNTGDAFGIF-------------PDGQLYIKS-ELDRELQDRYVLLVVASDRA 1058
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
V+ ++ A +VTV + D NDN P+F+ Y F + + S +G VSA
Sbjct: 1059 VEPLS-ATVNVTVILEDVNDNRPLFNSTNYTFYFEE----------EQRPGSFVGKVSAI 1107
Query: 146 DAD 148
D D
Sbjct: 1108 DKD 1110
>gi|426231037|ref|XP_004009555.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-7 [Ovis aries]
Length = 803
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 109/253 (43%), Gaps = 45/253 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DREE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 424 LVTDSPLDREERAEYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLWVRE 483
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYK-------LAVPSNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L ++LV I P G
Sbjct: 484 ----NNSPALH------IGSVSATDTDAGANAQVTYSLLPPPDPLLPLASLVSINPDNGH 533
Query: 172 LL-LTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQMIDR 227
L LT +E V A D SP+ ++ +V + N+P + L + +
Sbjct: 534 LFALTSLDYEALRAFEFRVGATDRGSPALSSQALVRVLVADANDNAPFV----LYPLQNA 589
Query: 228 KSEAPHRIEKRRVTRAVRP---TKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPW 284
+ P + V RA P ++ + D + + L K TE F + W
Sbjct: 590 SAPCP-----QLVPRAAEPGYLVTKVVAVDGDAGQNAWLSYQLLKATEPGLFGV-----W 639
Query: 285 ITVDENGDVRVKK 297
NG+VR +
Sbjct: 640 A---HNGEVRTAR 649
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREEV + SL++TA D + T V + V D NDN+P F Q +Y+ + +
Sbjct: 215 LVLDRPLDREEVPELSLILTALDGGSPVRSGTTLVRILVWDTNDNAPEFVQPLYKVQLCE 274
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVV----IVPQTGELLL 174
+S V S + +VSA D D ++ Y + ++ I P +G + L
Sbjct: 275 -----DSPVG-----SLVVTVSARDLDTGSNGEIVYAFFYATERILKTFQINPTSGSVYL 324
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+ + ++ Y LT++A D
Sbjct: 325 RAELNYEVMQIYTLTIQAKD 344
>gi|321478607|gb|EFX89564.1| hypothetical protein DAPPUDRAFT_233379 [Daphnia pulex]
Length = 6466
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 46/80 (57%), Gaps = 12/80 (15%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DREE+ YSL + ATD G A THVTVD+LD+ND++PV +Q Y +V + +
Sbjct: 4183 LDREEIGSYSLQVLATD--GFFTATTHVTVDILDDNDHAPVCTQHRYHELVSEATA---- 4236
Query: 129 NVSHWKKFSSIGSVSATDAD 148
+ I V ATDAD
Sbjct: 4237 ------PGTFIVRVRATDAD 4250
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 115/275 (41%), Gaps = 43/275 (15%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS-GDIDREEVAQYSLVITATDVKG 88
+ IT GN + +F + NP+T G+++V+ G +D E Y+L I+A ++ G
Sbjct: 2852 FEITDGNGDGSFTI-NPST-----------GIIVVSPRGGLDYETTKHYNLSISAMNMAG 2899
Query: 89 INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG-SVSATDA 147
+ A V V V D NDNSP FSQ++Y G + + + +++ SS VSA D
Sbjct: 2900 -SSARCLVHVHVSDVNDNSPTFSQELYE---GTISEAAAAGSLVFQRLSSAPLVVSARDG 2955
Query: 148 DGD---KVAYKLAVP--SNLVVIVPQTGELLLTGDPPSDD---VEYELTVEAHDLQSPSR 199
D ++Y + P + L I TG + P D E TV+ D P R
Sbjct: 2956 DSGVNALLSYDIVEPRAAQLFAIDSNTGAVRTLA--PLDREQLARVEFTVQVSDHGRPRR 3013
Query: 200 YAREPAQVWLQF-----NSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSE 254
+ + A+V + + P +QL P+ T A R+ +
Sbjct: 3014 NSDQVARVSIVITDVNDSPPKFIGQQL----------PYSASLLLPTFAGVAVVRVRAED 3063
Query: 255 TDGEMEGRIVFALEKETEREKFKIRDENPWITVDE 289
D ++ + + + KF I WI+V +
Sbjct: 3064 PDVDINSTLTYEITGGNGAGKFSIDRRTGWISVSD 3098
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 90/206 (43%), Gaps = 36/206 (17%)
Query: 6 SGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVT 65
S G + L +L S + ++YSI GN++ FA+ + SGV+ +
Sbjct: 4448 SAIGAEILNVLATSLDIGVNAEIKYSIVGGNEHRHFAI------------DPLSGVISLA 4495
Query: 66 SGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYR------F 117
+D E ++ L + A D G+ H V + VLD NDN P+F+Q Y
Sbjct: 4496 E-PLDYERAREFYLTVQALD-GGVPPLSNHAAVNITVLDSNDNPPIFTQASYSAAIREDA 4553
Query: 118 IVGDLKSSLNS-NVSHWKKFSSIGSVSATDADGDKVA-YKLAVPSNLVVIVPQTGELLLT 175
I+G+ LN+ ++ G ++ T +GD+ A +++ + L+ + Q L+T
Sbjct: 4554 IIGETVLRLNAVDLDGGDN----GRITYTLLNGDRHAQFRIDSSTGLLTVSGQLDRELIT 4609
Query: 176 GDPPSDDVEYELTVEAHDLQSPSRYA 201
Y L VEA D PS A
Sbjct: 4610 --------SYMLEVEARDNGLPSSLA 4627
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 32/191 (16%)
Query: 12 GLPILVASSHKHPHQ---LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G P++ + H L+ Y I+ G+D+ F + +++SG+L V +G
Sbjct: 1613 GTPLIRLRARDRDHGYNGLLVYVISGGDDDSAFQI------------DTESGLLRV-AGQ 1659
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE+ A YSL +T D+ K+ + V V D NDN P F + V + +
Sbjct: 1660 LDREKRAGYSLNVTVFDLGQPQKSAWRILPVIVTDVNDNPPRFDRPVISVSIAETA---- 1715
Query: 128 SNVSHWKKFSSIGSVSATDAD-GD--KVAYKLA-VPSNLVVIVPQTGELLLTGDPPSDDV 183
+ +S+ +SA DAD GD K+ + LA S+ + + P TG L ++G +
Sbjct: 1716 ------QIGTSVAQLSANDADEGDNAKITFALAGGESSDLKLDPNTGLLTVSGQLDRERR 1769
Query: 184 E-YELTVEAHD 193
+ YE+ V A D
Sbjct: 1770 DFYEVVVIARD 1780
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 24/128 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
++ Y I GN FA++ + +G + V +D E+ + Y L I+ TD
Sbjct: 2540 MLWYKIEDGNIGDKFAMQT-----------TGNGKVYVAQ-PLDWEQQSSYLLNISITD- 2586
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
G N T + + VLD ND++PVFS++ YR V + N+ V + I +++ATD
Sbjct: 2587 -GHNTIYTQLEITVLDVNDHAPVFSEQHYRAEVSE-----NAEVG-----AEIITLNATD 2635
Query: 147 ADGDKVAY 154
AD DK +
Sbjct: 2636 ADQDKRVF 2643
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 35 GNDNH--TFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD--VKGIN 90
G DN T+ L N H + +S +G LL SG +DRE + Y L + A D +
Sbjct: 4569 GGDNGRITYTLLNGDRHA-QFRIDSSTG-LLTVSGQLDRELITSYMLEVEARDNGLPSSL 4626
Query: 91 KAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ V V+V D NDN P FSQ Y I
Sbjct: 4627 ASNVLVAVEVTDANDNPPAFSQVNYTAI 4654
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 79/177 (44%), Gaps = 26/177 (14%)
Query: 33 TQGNDNHTFALKNPTTHEIRNSTESKSGVL-LVTSGDIDREEVAQYSLVITATDVKGINK 91
T N++ TF++ NP ST SGV+ + DRE +Y +V+ A +G +
Sbjct: 3167 THLNEHVTFSILNPQGLFQVGST---SGVVQAIGQVPFDREVQPRYVIVVEARSERGDGE 3223
Query: 92 ----AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
A T V ++V D NDN P F Y +V S K S + V A D
Sbjct: 3224 KPRIAHTRVEIEVTDINDNRPAFFNLPYYAVVS----------SEAPKGSVVTKVQAMDK 3273
Query: 148 D----GDKVAYKLAVPSN-LVVIVPQTGELLL--TGDPPSDDVEYELTVEAHDLQSP 197
D GD + Y+L S L + +TGE+LL + +YEL V A+D +P
Sbjct: 3274 DVGENGD-IRYELLRGSGELFRVDRRTGEILLRHVLEGQQGHSDYELVVAAYDGGTP 3329
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE Y + ++A D G T + V V D NDN P +F++ + ++++++
Sbjct: 3733 LDRESRRVYEIPVSAFDAGG-KSGHTTLRVKVGDANDNRP-------KFLLAEYRANIHA 3784
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAYKL-----AVPSNLVVIVPQTGELLLTGDPPSDDV 183
N S + F + ++ + K++Y + S+ I P TGEL L + +
Sbjct: 3785 NYSVGQPFLKVQAIDLDVDNNAKISYSIYESNGTRASDTFDINPSTGELFLKQNALALAN 3844
Query: 184 E-YELTVEAHDLQSPSRYAREPAQVWL 209
E ++ V A D SP P V +
Sbjct: 3845 EVFQFFVRAEDHGSPVLGTEAPVDVLI 3871
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 128/305 (41%), Gaps = 75/305 (24%)
Query: 14 PIL-VASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
P+L V +S QL+ YSI GN+ FA+ + +G++ + + +D E
Sbjct: 3367 PVLSVQASSPSGRQLI-YSIVSGNEGEEFAV------------DFNTGLIYIVN-RLDYE 3412
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSH 132
++Y L++ ATD +E V+V V D ND+ P FS Y + + S
Sbjct: 3413 VRSKYELLVRATDSVSGAHSEVPVSVSVEDANDSPPEFSNNEYNVTLSEATPS------- 3465
Query: 133 WKKFSSIGSVSATDADGD---KVAYKLAVPSN---------------LVVIVPQTGELLL 174
+ + +VSA D D +V Y+L +N I P+ G L+L
Sbjct: 3466 ---GTVVLAVSAHDLDSGINAQVVYRLLAETNGGQDAAVAVSAASAEFFHINPEDGTLIL 3522
Query: 175 TGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSE 230
S D E + L V A D +PS + A +W++ ++ ++
Sbjct: 3523 VR---SLDRETQSLHHLLVMASDQGNPSLSST--AHIWIR--------------VEDVND 3563
Query: 231 APHRIEKRRVTRAV--RPTKRIDF----SETDGEM--EGRIVFALEKETEREKFKIRDEN 282
P + E+R R V KR F + TD ++ + R+V++L +++ F I +
Sbjct: 3564 NPPQFEQRSY-RCVLSEDGKRGQFVTMVTATDPDVSDQTRLVYSLTGGNDQQMFNIDSKR 3622
Query: 283 PWITV 287
+T+
Sbjct: 3623 GTVTL 3627
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 13/99 (13%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQ 112
+ +++SG++ V G +DRE V Y+L ++A D+ + + VT+ V D NDN P FS+
Sbjct: 4379 AIDAESGIVTVAKG-LDRETVPSYNLTVSAIDLGTPSLLSTVVVTIVVTDCNDNPPQFSR 4437
Query: 113 KVYRFIVGD-----------LKSSLNSNVSHWKKFSSIG 140
K+Y V + L +SL+ V+ K+S +G
Sbjct: 4438 KLYAASVAESSAIGAEILNVLATSLDIGVNAEIKYSIVG 4476
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 16/89 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
V+ SI GN F + NPT SGVL T+ +D E A++ L ++A D
Sbjct: 1262 VQLSIVGGNQGGHFRI-NPT-----------SGVLY-TALPLDAEMRAEHILTVSAIDQG 1308
Query: 86 VKGI-NKAETHVTVDVLDENDNSPVFSQK 113
G ++ +TV VLD NDN P+F Q+
Sbjct: 1309 TAGTRQQSSAKITVQVLDANDNDPIFYQQ 1337
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVY 115
+ T G +DRE+ +Y L I A+D K + T V ++V D NDN P FSQ Y
Sbjct: 4059 ITTLGLLDREQCDRYVLPIIASDNGTPAKLTSTTAVVIEVRDYNDNPPQFSQSHY 4113
>gi|345784074|ref|XP_856760.2| PREDICTED: protocadherin Fat 4 isoform 2 [Canis lupus familiaris]
Length = 4980
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 85/176 (48%), Gaps = 31/176 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN H+F + N T EIR+ +DRE+V+QY L I +
Sbjct: 2699 PNGQLDYEIVNGNKEHSFTI-NHATGEIRSIRP------------LDREKVSQYVLTIKS 2745
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D KG T V V ++LDENDN+P FSQ ++ NS + + ++
Sbjct: 2746 SD-KGSPSQSTSVKVIINILDENDNAPRFSQIFSAYV------PENSPLGY-----TVTR 2793
Query: 142 VSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ +D D D A Y + S I P TG+++++ +D + Y + V AHD
Sbjct: 2794 VTTSDEDIDINAISRYSIMDTSLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2849
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+RYSI+ GN+ FA+ S +G+L + +D E ++ + I+ATD
Sbjct: 3123 LIRYSISSGNEEGIFAIN------------SSTGILTLAKA-LDYELCQKHEMTISATDG 3169
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + VTV+V+D NDNSPVF Y V + + +++ ++AT
Sbjct: 3170 GWVARTGYCSVTVNVIDVNDNSPVFFPDEYFPTV----------LENAPSGTTVIHLNAT 3219
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
DAD +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 3220 DADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQG---FLDFETKQSYHLTVKAFNVPDE 3276
Query: 198 SRYAREPAQVWLQ 210
R + + L+
Sbjct: 3277 ERCSFATINIQLK 3289
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 84/185 (45%), Gaps = 40/185 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+ YS+ +GN+ FA+ +S SG V L+ G +D E YSLVI A D
Sbjct: 1244 LIHYSVIKGNEERQFAI------------DSTSGQVTLI--GKLDYEATPAYSLVIQAVD 1289
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
+ T + +D+LDENDN+P F KS+L +V + + SV+
Sbjct: 1290 SGAVPLNSTCTLNIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVT 1338
Query: 144 ATDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
ATD+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1339 ATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQ 1395
Query: 195 QSPSR 199
P R
Sbjct: 1396 GRPPR 1400
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
VRYSI+ G+ + R ++SGV+ T +DREE Y L I ATD
Sbjct: 724 VRYSISAGDRS-------------RFQVNAQSGVI-STRMALDREEKTAYQLQIVATDGG 769
Query: 88 GINKA-ETHVTVDVLDENDNSPVFSQKVYRFI----------VGDLKSS---LNSNVSHW 133
+ + VT+ VLD DN PVFSQ Y F+ VG + +S LNSN+S+
Sbjct: 770 NLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFENVALGYHVGSVSASTMDLNSNISYL 829
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 72/174 (41%), Gaps = 29/174 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ T H L T+ IDREE + Y L + A+
Sbjct: 826 ISYLITTGDQKGMFAINQVTGH-------------LTTASVIDREEQSFYQLKVVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V D NDNSP F Q V S+N V +W+ SI A D
Sbjct: 871 GTVTGDTVVNITVKDLNDNSPHFLQAV---------ESVNV-VENWQAGHSIFQAKAVDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSP 197
D V Y L P NL I + G + L G Y++ + A D+ P
Sbjct: 921 DEGVNGMVLYSLKQNPKNLFAINEKNGNISLLGPLDVHAGSYQIEILASDMGVP 974
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ Y+L + ATD KG + T V V VLD NDN+PVF Q +Y+
Sbjct: 2109 TGELDREEVSNYTLTVVATD-KGQPALSSSTEVVVMVLDINDNNPVFMQALYK 2160
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 84/188 (44%), Gaps = 26/188 (13%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I QGN+ F L N + + + LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIVQGNEAGRFRLD-----ITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KGE 227
Query: 90 NKAETH--VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
K + V V V D NDN PVF Y+ V + ++ V SS+ V+A DA
Sbjct: 228 PKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE-----DAAVG-----SSVLQVAAADA 277
Query: 148 D---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSPSRYA 201
D + Y+L + P+TG L+T P D +Y LTV+A D PS
Sbjct: 278 DEGTNADIRYRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTVQALDRGVPSLTG 335
Query: 202 REPAQVWL 209
R A + L
Sbjct: 336 RAEALIQL 343
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1754 GDGSKIMQLTAMDADEGANALVTYTIISGADD-SFRI------------DPESGDLIATK 1800
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND++P FS+ VY F
Sbjct: 1801 -RLDRERRSKYSLLVRADD--GLQSSDMRINITVSDVNDHTPKFSRPVYSF 1848
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVF 110
L T +DREE A YSL++ ATD+ ++ + V +LD NDNSPVF
Sbjct: 641 LSTVASLDREEQAFYSLLVLATDLGSPPQSSMARINVSLLDVNDNSPVF 689
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 35/177 (19%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKV 114
K+G + V SG +DRE+ + SL + A + ++G + E V V VLD ND P+FS +
Sbjct: 3351 KTGQIYV-SGLLDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND-PPIFSLNI 3408
Query: 115 YRFIVGD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLV 163
Y + + S+ +S+ V W +FS IGS + A
Sbjct: 3409 YSVQISEGVPTGTHVTFVSAFDSDSVPSWSRFSYFIGSGNENGA---------------F 3453
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
I PQTG++ +T + + + Y LTV A D +PS V L+ N P+L
Sbjct: 3454 SINPQTGQITVTAELDRETLPIYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + + A + + VRY I GN N F + +S +G
Sbjct: 2165 ENTLTGTDI--IQVYAADGDEGTNGQVRYGIIDGNANQEFRI------------DSVTGA 2210
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVY 115
+ V +DRE+ YSL + ATD + + T V + +LD ND P+F Y
Sbjct: 2211 ITVAK-PLDREKTPTYSLTVQATDRGSTPRTDTTTVNIVLLDINDFVPMFELSPY 2264
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 113/276 (40%), Gaps = 46/276 (16%)
Query: 30 YSITQGND--NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+++T +D N A + + T K+GVL V +DRE + Y+LV+ D+
Sbjct: 1966 FNVTDADDGINSQLAFSIASGDSLSQFTVDKNGVLKVLK-SLDRESQSFYNLVVQVHDLP 2024
Query: 88 GINKAE----THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV- 142
+ + HV++ +LD NDN P F L+ +++ + + I ++
Sbjct: 2025 QLPASRFTSTAHVSIILLDVNDNPPAF---------------LSPKLTYIPENTPIDTIV 2069
Query: 143 ---SATDADG---DKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDL 194
ATD D + Y L P N I GE+ LTG+ ++V Y LTV A D
Sbjct: 2070 FKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDK 2129
Query: 195 QSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRID 251
P+ + V + N+PV +A +++E T ++
Sbjct: 2130 GQPALSSSTEVVVMVLDINDNNPVFM------------QALYKVEINENTLTGTDIIQVY 2177
Query: 252 FSETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
++ D G++ + + ++F+I ITV
Sbjct: 2178 AADGDEGTNGQVRYGIIDGNANQEFRIDSVTGAITV 2213
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 29/174 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y + GN+++ F L S SG L V +DRE A + L++TATD
Sbjct: 2295 LSYVLFGGNEDNAFTL-------------SASGELRVIQ-SLDRETKAHFVLMVTATD-S 2339
Query: 88 GINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G T++V+ D NDN P F+ K+Y + + + + V+A+
Sbjct: 2340 GSPALTGTGTINVIIDDVNDNVPTFASKMYFTTIPE----------DAPTGTDVLLVNAS 2389
Query: 146 DADGDKVAYKLAVPSN-LVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSP 197
DAD A + N I P TG+++ + + E Y L V + D SP
Sbjct: 2390 DADASTNAVIRIIGGNSQFTINPSTGQIITSALLDRETKENYTLVVVSSDAGSP 2443
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 28/155 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN++ GT V L + A S + + I GN+ F E+++S +
Sbjct: 369 ENAQVGTVVALLTVTDADS-PAANGNISVQILGGNEQRHF--------EVQSSKVPNLSL 419
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGI-----NKAETHVTVDVL---DENDNSPVFSQK 113
+ V S +DRE + Y+L ++ +D G +A + V V+ D ND+ PVF+Q+
Sbjct: 420 IKVASA-LDRERIPSYNLTVSVSDNFGAPPGTAARARSSVASLVIFVNDINDHPPVFAQQ 478
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
VYR + + S + VSATD D
Sbjct: 479 VYRVNLSE----------EAPPGSYVSGVSATDGD 503
>gi|426382653|ref|XP_004057918.1| PREDICTED: cadherin-3 isoform 2 [Gorilla gorilla gorilla]
Length = 784
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 252 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 303
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+PVF + Y
Sbjct: 304 DGDGSTTTAVAVVEILDANDNAPVFDPQKY 333
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 26/156 (16%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DREE+A+Y L A G + + ++++ V D+ND+ P F+Q
Sbjct: 159 AVEKETGWLLLNK-PLDREEIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQ 217
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAV-----------PSN 161
+R V L+ L +S+ V+ATD D Y V P +
Sbjct: 218 DTFRGSV--LEGVLPG--------TSVMQVTATDEDDAIYTYNGVVAYSIHSQEPKDPHD 267
Query: 162 LVVIVPQ---TGELLLTGDPPSDDVEYELTVEAHDL 194
L+ + + T ++ +G EY LT++A D+
Sbjct: 268 LMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 303
>gi|194764619|ref|XP_001964426.1| GF23055 [Drosophila ananassae]
gi|190614698|gb|EDV30222.1| GF23055 [Drosophila ananassae]
Length = 1965
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 102/258 (39%), Gaps = 65/258 (25%)
Query: 3 NSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL 62
N SG VK I AS KH + Y + GN++ F + T
Sbjct: 1437 NENSGRDVKIGHIQAASRSKHNRDIFYYMLL-GNEDGAFYVDKLTGD------------- 1482
Query: 63 LVTSGDIDREEVAQYSLVITAT---------------DVKGINKAET--HVTVDVLDEND 105
+ T+ +DRE+ Y+L I A+ +K +N+ T V + VLD ND
Sbjct: 1483 IYTNKSLDREQTDSYTLYILASIKADLHISEEERASFSIKTLNRDNTVAKVAITVLDVND 1542
Query: 106 NSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA-----------Y 154
N PVF + +Y + +N+N K ++I V+ATDAD K A Y
Sbjct: 1543 NPPVFEKPIYY-------AGVNANA---KMGAAIALVNATDADQGKNAKIEYMIVASNLY 1592
Query: 155 KLAVPSNLVVIVPQTGELLLTGDPPSDDV-------EYELTVEAHDLQSPSRYAREPAQV 207
K IVP + G ++ + +EL + A +L+ P R A +
Sbjct: 1593 KFGASKATGSIVPSPFAISQDGRITANTIMAEYNQDHFELEIIARELEQPQRSASTKVNI 1652
Query: 208 WLQFNSPVLQDEQLLQMI 225
W V QL+++I
Sbjct: 1653 W------VFDGTQLVRVI 1664
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 77/152 (50%), Gaps = 19/152 (12%)
Query: 54 STESKSG-VLLVTSGDIDREEVAQYSLVITATDVK--GINKAETH-VTVDVLDENDNSPV 109
S ++ +G V++ S +DRE++ + +L + A D + K+ T + +++LD NDN+P+
Sbjct: 1145 SIDAYTGNVMVANSSILDREQIKELTLSVVAQDKAPATVQKSATATIHINILDVNDNAPI 1204
Query: 110 FSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVV- 164
F++ VY S++ N + ++ +++ V A D D GD V Y + + + +
Sbjct: 1205 FTRDVY-------NSTVAENAA-YQPPAALLQVQAIDQDEGLYGD-VRYIITAGNEMALF 1255
Query: 165 -IVPQTGELLLTGDPPSDDVEYELTVEAHDLQ 195
+ Q+G + YELT+ A D Q
Sbjct: 1256 KLDAQSGIVYPAQSLAGKHGVYELTISARDTQ 1287
>gi|114663315|ref|XP_001168050.1| PREDICTED: cadherin-3 isoform 8 [Pan troglodytes]
gi|410209982|gb|JAA02210.1| cadherin 3, type 1, P-cadherin (placental) [Pan troglodytes]
Length = 829
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 252 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 303
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+PVF + Y
Sbjct: 304 DGDGSTTTAVAVVEILDANDNAPVFDPQKY 333
>gi|297461475|ref|XP_001249786.2| PREDICTED: protocadherin Fat 4 [Bos taurus]
gi|297484612|ref|XP_002694439.1| PREDICTED: protocadherin Fat 4 [Bos taurus]
gi|296478713|tpg|DAA20828.1| TPA: fat-like [Bos taurus]
Length = 4981
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 35/193 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+RYSI+ GN+ FA+ S +GVL + +D E ++ + ++ATD
Sbjct: 3123 LIRYSISSGNEEGIFAIN------------SSTGVLTLAKA-LDYELCQKHEMTVSATDG 3169
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+++ VTV+V+D NDNSPVF Y V + + +++ ++AT
Sbjct: 3170 GWVSRTGYCSVTVNVIDVNDNSPVFLPDEYFPTV----------LENAPSGTTVIHLNAT 3219
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
DAD +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 3220 DADSGTNAVIAYTIQSSDSDLFVIDPNTGVVTTQG---FLDFETKQSYHLTVKAFNVPDE 3276
Query: 198 SRYAREPAQVWLQ 210
R + + L+
Sbjct: 3277 ERCSFATVNIQLK 3289
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 85/185 (45%), Gaps = 40/185 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+ YS+ +GN+ FA+ +S SG V L+ G +D E YSLVI A D
Sbjct: 1244 LIHYSVIKGNEERQFAI------------DSTSGQVTLI--GRLDYEATPAYSLVIQAVD 1289
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
++ T + +D+LDENDN+P F KS+L +V + + SV+
Sbjct: 1290 SGAVSLNSTCTLNIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVT 1338
Query: 144 ATDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
ATD+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1339 ATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQ 1395
Query: 195 QSPSR 199
P R
Sbjct: 1396 GRPPR 1400
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
++YSI+ G+ + R ++SGV+ T +DREE Y L I ATD
Sbjct: 724 IKYSISAGDRS-------------RFQVNAQSGVI-STRMALDREEKTAYQLQIVATDGG 769
Query: 88 GINKA-ETHVTVDVLDENDNSPVFSQKVYRFI----------VGDLKSS---LNSNVSHW 133
+ + VT+ VLD DN PVFSQ Y F+ VG + +S LNSN+S+
Sbjct: 770 NLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFENVALGYHVGSVSASTMDLNSNISYL 829
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 89/175 (50%), Gaps = 29/175 (16%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN H+F++ N T EIR+ +DRE+++QY L++ +
Sbjct: 2699 PNGQLDYEIINGNKEHSFSI-NHATGEIRSIRP------------LDREKISQYVLIVKS 2745
Query: 84 TDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
+D +++ + V +++LDENDN+P FSQ ++ V + NS + + ++ V
Sbjct: 2746 SDRGSPSQSTSVKVIINILDENDNAPRFSQ-IFSAHVPE-----NSPLGY-----TVTRV 2794
Query: 143 SATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
+ +D D A Y + S I P TG+++++ +D + Y + V AHD
Sbjct: 2795 TTSDEDIGVNAISRYSIMDTSLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2849
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ Y+L + ATD KG + T V V VLD NDN+PVF+Q +Y+
Sbjct: 2109 TGELDREEVSNYTLTVVATD-KGHPSLSSSTEVVVMVLDINDNNPVFAQAMYK 2160
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 84/188 (44%), Gaps = 26/188 (13%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I QGN+ F L N + + + LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIIQGNEAGRFRLD-----ITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KGE 227
Query: 90 NKAETH--VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
K + V V V D NDN PVF Y+ V + ++ V SS+ V+A DA
Sbjct: 228 PKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE-----DAAVG-----SSVLQVAAADA 277
Query: 148 D---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSPSRYA 201
D + Y+L + P+TG L+T P D +Y LTV+A D PS
Sbjct: 278 DEGTNADIRYRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTVQAMDRGVPSLTG 335
Query: 202 REPAQVWL 209
R A + L
Sbjct: 336 RAEALIQL 343
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 71/174 (40%), Gaps = 29/174 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ T L T+ IDREE + Y L + A+
Sbjct: 826 ISYLITTGDQKGMFAINQVTGQ-------------LTTASVIDREEQSFYQLKVVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G ++ V + V D NDNSP F Q V S+N V +W+ SI A D
Sbjct: 871 GTVTGDSMVNITVKDLNDNSPHFLQAV---------ESVNV-VENWQAGHSIFQAKAVDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSP 197
D V Y L P NL I + G + L G Y++ + A D+ P
Sbjct: 921 DEGVNGMVLYSLKQNPKNLFTINERNGNISLLGPLDVHAGSYQIEILASDMGVP 974
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1754 GDGSKIMQLTAMDADEGANALVTYTIISGADD-SFRI------------DPESGDLIATK 1800
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND++P FS+ VY F
Sbjct: 1801 -RLDRERRSKYSLLVRADD--GLQSSDMRINITVSDVNDHTPKFSRPVYSF 1848
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 35/177 (19%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKV 114
K+G + V SG +DRE+ + SL + A + ++G + E V V VLD ND PVFS +
Sbjct: 3351 KTGQIYV-SGLLDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND-PPVFSLNI 3408
Query: 115 YRFIVGD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLV 163
Y + + S+ +S+ V W +FS IGS + A
Sbjct: 3409 YSVQISEGVPTGTHVTFVSAFDSDSVPSWSRFSYFIGSGNENGA---------------F 3453
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
I PQTG++ +T + + + Y LTV A D +PS V L+ N P+L
Sbjct: 3454 SINPQTGQITVTAELDRETLPIYNLTVLAVDSGTPSATGSASLLVILEDINDNGPML 3510
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + A + + VRY I GN N F + +S +G
Sbjct: 2165 ENTLTGTDIT--QVFAADGDEGTNGQVRYGIVDGNANQEFRI------------DSVTGA 2210
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
+ V +DRE+ YSL + ATD + +T +++ +LD ND P+F Y
Sbjct: 2211 ITVAK-PLDREKTPTYSLTVQATDRGSTPRTDTSTISIVLLDINDFVPIFELSPY 2264
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 26 QLVRYSITQGN--DNHT--FALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVI 81
+L+ T G+ DN T F+L+ T + + SG L S +DREE A YSL++
Sbjct: 601 ELLVLGATDGDLGDNGTVRFSLQEAETDQRSFRLDPVSGRLSTIS-SLDREEQAFYSLLV 659
Query: 82 TATDVKGINKAE-THVTVDVLDENDNSPVF 110
ATD+ ++ + V +LD NDNSPVF
Sbjct: 660 LATDMGSPPQSSMVRINVSLLDINDNSPVF 689
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 114/276 (41%), Gaps = 46/276 (16%)
Query: 30 YSITQGND--NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+++T +D N A + + T K+GVL V +DRE + Y+LV+ D+
Sbjct: 1966 FNVTDADDGINSQLAYSIASGDSLGQFTVDKNGVLKVLK-PLDRESQSFYNLVVQVHDLP 2024
Query: 88 GINKAE----THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV- 142
+ + +++ +LD NDN P F L+ +++ + + I ++
Sbjct: 2025 QLPASRFTSTAQISIILLDVNDNPPTF---------------LSPKLTYIPENTPIDTIV 2069
Query: 143 ---SATDADG---DKVAYKLAVPS-NLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDL 194
ATD D + Y L PS N I GE+ LTG+ ++V Y LTV A D
Sbjct: 2070 FKAQATDPDSGPNSYIEYTLLNPSGNKFTIGTIDGEVRLTGELDREEVSNYTLTVVATDK 2129
Query: 195 QSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRID 251
PS + V + N+PV ++A +++E T ++
Sbjct: 2130 GHPSLSSSTEVVVMVLDINDNNPVF------------AQAMYKVEINENTLTGTDITQVF 2177
Query: 252 FSETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
++ D G++ + + ++F+I ITV
Sbjct: 2178 AADGDEGTNGQVRYGIVDGNANQEFRIDSVTGAITV 2213
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 17/90 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y + GN+++ F L S SG L VT +DRE + L+ITATD
Sbjct: 2295 LSYVLFGGNEDNAFTL-------------SASGELRVTQ-SLDRETKEHFVLLITATD-S 2339
Query: 88 GINKAETHVTVDVL--DENDNSPVFSQKVY 115
G T++V+ D NDN P F+ K+Y
Sbjct: 2340 GFPALTGTGTINVIVDDINDNVPTFASKMY 2369
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 49/116 (42%), Gaps = 21/116 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ +GT V ILV +S I GN T NP+T +I
Sbjct: 2375 EDAPTGTDV----ILVNASDIDASTNAVIRIIGGNSQFTI---NPSTGQI---------- 2417
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVY 115
+TS +DRE Y+LV+ A+D + T V V V D NDN P F Y
Sbjct: 2418 --ITSALLDRETKENYTLVVVASDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPY 2471
Score = 37.4 bits (85), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 28/155 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN++ GT V L + A S + + I GN+ F E+++S +
Sbjct: 369 ENAQVGTVVALLTVTDADS-PAANGNISVQILGGNEQRHF--------EVQSSKVPNLSL 419
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGI--------NKAETHVTVDVLDENDNSPVFSQK 113
+ V S +DRE + Y+L ++ +D G + + + V D ND+ PVF+Q+
Sbjct: 420 IKVASA-LDRERIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPVFAQQ 478
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
VYR + + S + VSATD D
Sbjct: 479 VYRVNLSE----------EAPPGSYVSGVSATDGD 503
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 27/123 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
+ YSI +GN F + G L + S ++DRE +Y L++ A+D
Sbjct: 1031 IAYSIAEGNTGDAFGIF-------------PDGQLYIKS-ELDRELQDRYVLLVVASDRA 1076
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
V+ ++ A +VTV + D NDN P+F+ Y F + + S +G VSA
Sbjct: 1077 VEPLS-ATVNVTVILEDVNDNRPLFNSTNYTFYFEE----------EQRPGSFVGKVSAI 1125
Query: 146 DAD 148
D D
Sbjct: 1126 DKD 1128
>gi|397487014|ref|XP_003814609.1| PREDICTED: cadherin-3 isoform 1 [Pan paniscus]
Length = 829
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 252 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 303
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+PVF + Y
Sbjct: 304 DGDGSTTTAVAVVEILDANDNAPVFDPQKY 333
>gi|327261355|ref|XP_003215496.1| PREDICTED: protocadherin Fat 2-like [Anolis carolinensis]
Length = 1350
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 34/174 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y I+ GN++ F + ++++G+LLV+S D E + Y L IT D+
Sbjct: 752 IVYVISSGNEDSCFYI------------DTETGLLLVSSL-FDHERTSFYVLNITVYDLG 798
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRFIVG-DLKSSLNSNVSHWKKFSSIGSVSAT 145
K+ + V++LD NDN+PVF Q VY + D+K +++ V A
Sbjct: 799 TPQKSSWKLLAVNILDANDNAPVFLQSVYLVTIPEDIKIG-----------ATVIVVKAE 847
Query: 146 DADGD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSDD---VEYELTVEAHD 193
DAD + +V Y P++ I TGE+++T P D +Y L VEA D
Sbjct: 848 DADTNDNGRVKYSFLAPTDKFAINSVTGEVVVTA--PLDRELWPQYVLKVEARD 899
Score = 44.3 bits (103), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 19/111 (17%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD---LKSS 125
++RE +Y L+I A + +A V V +LD ND P+FS Y+ + D LK
Sbjct: 110 LNREFKDKYILIIQAIEKTFAYEAWVKVLVHILDRNDLKPLFSPPSYKVAIKDDTPLK-- 167
Query: 126 LNSNVSHWKKFSSIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELL 173
++IG VSATDAD + A Y L S L I P +G ++
Sbjct: 168 -----------ATIGVVSATDADVGQNAEFYYALNTRSALFTIHPTSGAIM 207
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
MENS + T V L + + + I GN FA+ NP T G
Sbjct: 1149 MENSPANTSV--LQVEATDPDSDSQGKLTFHIINGNHQDFFAV-NPET-----------G 1194
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVY 115
++ TS +DRE A++ L ++ +D K+ + + V D NDN+P +SQK +
Sbjct: 1195 LIYTTSQQLDREYKAEHILEVSVSDNGDPALKSTGRIVIQVTDVNDNAPSYSQKFF 1250
>gi|410303584|gb|JAA30392.1| cadherin 3, type 1, P-cadherin (placental) [Pan troglodytes]
Length = 829
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 252 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 303
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+PVF + Y
Sbjct: 304 DGDGSTTTAVAVVEILDANDNAPVFDPQKY 333
>gi|402908841|ref|XP_003917142.1| PREDICTED: cadherin-3-like [Papio anubis]
Length = 601
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 252 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 303
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+PVF + Y
Sbjct: 304 DGDGSTTTAVAVVEILDANDNAPVFDPQKY 333
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DREE+A+Y L A G + + ++++ V D+ND+ P F+Q
Sbjct: 159 AVEKETGWLLLNK-PLDREEIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQ 217
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+R V L+ L +S+ V+ATD D
Sbjct: 218 DTFRGSV--LEGVLPG--------TSVMQVTATDED 243
>gi|291390385|ref|XP_002711685.1| PREDICTED: E-cadherin-like [Oryctolagus cuniculus]
Length = 884
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 76/157 (48%), Gaps = 28/157 (17%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE--THVTVDVLDENDNSPVFSQK 113
E ++G L VT +DRE +A+Y+L A G N E + + V D+NDN P F+Q+
Sbjct: 210 ERETGWLKVTE-PLDREHIAKYTLFSHAVSSNG-NAIEDPMEIVITVTDQNDNRPEFTQE 267
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP------------SN 161
V++ V ++ +L +S+ V+ATDAD D Y A+ N
Sbjct: 268 VFKGSV--MEGALPG--------TSVMQVTATDADDDVNTYNAAIAYEILSQEPELPHKN 317
Query: 162 LVVIVPQTG--ELLLTGDPPSDDVEYELTVEAHDLQS 196
+ I PQTG ++ TG EY L V+A DLQ
Sbjct: 318 MFRINPQTGVISVVTTGLDRETYPEYTLVVQAADLQG 354
Score = 44.3 bits (103), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 61/126 (48%), Gaps = 15/126 (11%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYR 116
++GV+ V + +DRE +Y+LV+ A D++G + T + V D NDN PVF+ Y
Sbjct: 324 QTGVISVVTTGLDRETYPEYTLVVQAADLQGEGLSTTAEAVITVTDINDNPPVFNPTTY- 382
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTG 176
VG + + + + + ++ TD D AV V+ G+ ++T
Sbjct: 383 --VGQVPENEANYL--------VATLKVTDKDEPNTPAWEAV---YTVLNDPEGQFIVTT 429
Query: 177 DPPSDD 182
DP ++D
Sbjct: 430 DPATND 435
>gi|426249950|ref|XP_004018709.1| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Ovis aries]
Length = 4184
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 467 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 525
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 526 KRY---VAQVREDV-------RPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDS 575
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 576 LTGEIQVVA--PLDFEAEREYALRIRAQDAGRP 606
Score = 55.5 bits (132), Expect = 4e-05, Method: Composition-based stats.
Identities = 75/268 (27%), Positives = 110/268 (41%), Gaps = 52/268 (19%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQ 112
S + +SG L+ T +DRE + ++ L +TA D A T V V V D ND++PVF Q
Sbjct: 355 SIDPQSG-LIRTEAALDRESMDRHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQ 413
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLAVPSNLVV----- 164
YR +L NV ++ I + ATD D A Y+ P
Sbjct: 414 AQYR-------ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFVGPPAARAAAADA 463
Query: 165 --IVPQTGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVWLQFNSPVLQDEQ 220
I P++G + +G + +E YEL VEA D Q P P ++ + VL
Sbjct: 464 FEIDPRSGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSATVRVHITVL---- 514
Query: 221 LLQMIDRKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGRIVFALEKETERE 274
D AP EKR V + VRP R+ ++ D + G + + + R
Sbjct: 515 -----DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRG 569
Query: 275 KFKIRDENPWITVDENGDVRVKKRWDFE 302
F I G+++V DFE
Sbjct: 570 HFAID--------SLTGEIQVVAPLDFE 589
Score = 43.5 bits (101), Expect = 0.13, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 543 LRVTATDRDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVVA-PLDFE 589
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y+L I A D ++ ++ V+D ND++P+F ++ V + + L +V
Sbjct: 590 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLE-NAPLGHSV 648
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKLA--VPSNLVVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L P VI TG + ++G + VE Y
Sbjct: 649 IH------IQAVDADHGENSRLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYFF 702
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 703 GVEARDHGSP 712
Score = 42.7 bits (99), Expect = 0.21, Method: Composition-based stats.
Identities = 53/180 (29%), Positives = 81/180 (45%), Gaps = 32/180 (17%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 1056 ENSIVGSVVA--QITAVDPDEGPNAHIMYQIVEGNIPELFQM------------DIFSGE 1101
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L D+D E +Y +V+ AT +++A HV + +D+NDNSPV + +
Sbjct: 1102 LTALI-DLDYEARQEYVIVVQATSAPLVSRATVHVRL--VDQNDNSPVLN---------N 1149
Query: 122 LKSSLNSNVS-HWKKFSS--IGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
+ N+ VS H F S IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1150 FQILFNNYVSNHSDTFPSGIIGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1209
Score = 42.4 bits (98), Expect = 0.33, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y L+
Sbjct: 689 SGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYH-----LRL 743
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
+ ++ V +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 744 NEDATVG-----TSVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLD 798
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 799 YKQERYFKLVLTASD 813
Score = 39.7 bits (91), Expect = 2.1, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 86/218 (39%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 959 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1006
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V Y L A D +G+ T V++ V D NDN+PVF + + V + NS V
Sbjct: 1007 AVPVYELTAYAVD-RGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1060
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1061 G-----SVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1115
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 1116 YVIVVQATSAPLVSRATVHVRLVDQNDNSPVLNNFQIL 1153
Score = 38.5 bits (88), Expect = 4.7, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKV 114
++ SG + + + +D E+ Y+L ITA D KA+T +V V V D NDN+P F
Sbjct: 885 DADSGAITLQA-PLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASH 943
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
Y +V + F+S+ +SATD D
Sbjct: 944 YTGLVSE----------DAPPFTSVLQISATDRDA 968
Score = 38.1 bits (87), Expect = 6.1, Method: Composition-based stats.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 33/203 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ GT V + V + + + + Y IT GN + FA+ ++ GV
Sbjct: 745 EDATVGTSV----VSVTAVDRDANSAISYQITGGNTRNRFAI------------STQGGV 788
Query: 62 LLVTSG-DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +D ++ + LV+TA+D + ++ +V +++ D N + PVF Y V
Sbjct: 789 GLVTLALPLDYKQERYFKLVLTASD-RALHD-HCYVHINITDANTHRPVFQSAHYSVSVN 846
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPP 179
+ + S++ +SA+D D G+ + NL +T P
Sbjct: 847 EDRPV----------GSTVVVISASDDDVGENARITYLLEDNLPQFRIDADSGAITLQAP 896
Query: 180 ---SDDVEYELTVEAHDLQSPSR 199
D V Y L + A D P +
Sbjct: 897 LDYEDQVTYTLAITARDNGIPQK 919
>gi|383414833|gb|AFH30630.1| cadherin-3 preproprotein [Macaca mulatta]
gi|383414835|gb|AFH30631.1| cadherin-3 preproprotein [Macaca mulatta]
Length = 829
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 252 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 303
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+PVF + Y
Sbjct: 304 DGDGSTTTAVAVVEILDANDNAPVFDPQKY 333
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DREE+A+Y L A G + + ++++ V D+ND+ P F+Q
Sbjct: 159 AVEKETGWLLLNK-PLDREEIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQ 217
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+R V L+ L +S+ V+ATD D
Sbjct: 218 DTFRGSV--LEGVLPG--------TSVMQVTATDED 243
>gi|297676229|ref|XP_002816045.1| PREDICTED: protocadherin beta-11 [Pongo abelii]
Length = 797
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 70/143 (48%), Gaps = 24/143 (16%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+DRE A+Y++ ITATD+ GI K E + TV V D NDNSP F+Q Y V +
Sbjct: 409 LDRESTAEYNITITATDL-GIPRLKTEYNTTVLVSDVNDNSPTFTQTSYTLFVRE----N 463
Query: 127 NSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGELLLTG 176
NS H IGSVSATD D +V Y L P ++LV I G L
Sbjct: 464 NSPALH------IGSVSATDRDSGTNAQVNYSLLPPQDPHLPLASLVSINADNGHLFALR 517
Query: 177 DPPSDDVE-YELTVEAHDLQSPS 198
+ ++ +E V A D SP+
Sbjct: 518 SLDYEALQAFEFRVGASDRGSPA 540
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 21/158 (13%)
Query: 48 THEIRNSTE--SKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDEND 105
+ +IR + E KSG + +T+ +D E + YS++I ATD G+ T V + V+D ND
Sbjct: 285 SEDIRKTFEINQKSGEITLTA-PLDFETIESYSIIIQATDGGGLFGKST-VRIQVIDVND 342
Query: 106 NSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVV 164
N+P + SS+ S + + + S D D GD ++P +L
Sbjct: 343 NAPEIT-----------VSSITSPIPENTPETVVMIFSIQDIDSGDNGRIVCSIPEDLPF 391
Query: 165 IVPQTGE--LLLTGDPPSD---DVEYELTVEAHDLQSP 197
++ + E L + P D EY +T+ A DL P
Sbjct: 392 VLKSSVENYYTLETERPLDRESTAEYNITITATDLGIP 429
>gi|426247077|ref|XP_004017313.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Ovis aries]
Length = 4968
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 35/193 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+RYSI+ GN+ FA+ S +GVL + +D E ++ + ++ATD
Sbjct: 3110 LIRYSISSGNEEGIFAIN------------SSTGVLTLAKA-LDYELCQKHEMTVSATDG 3156
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+++ VTV+V+D NDNSPVF Y V + + +++ ++AT
Sbjct: 3157 GWVSRTGYCSVTVNVIDVNDNSPVFLPDEYFPTV----------LENAPSGTTVIHLNAT 3206
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
DAD +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 3207 DADSGTNAVIAYTIQSSDSDLFVIDPNTGVVTTQG---FLDFETKQSYHLTVKAFNVPDE 3263
Query: 198 SRYAREPAQVWLQ 210
R + + L+
Sbjct: 3264 ERCSFATVNIQLK 3276
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 85/185 (45%), Gaps = 40/185 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+ YS+ +GN+ FA+ +S SG V L+ G +D E YSLVI A D
Sbjct: 1231 LIHYSVIKGNEERQFAI------------DSTSGQVTLI--GRLDYEATPAYSLVIQAVD 1276
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
++ T + +D+LDENDN+P F KS+L +V + + SV+
Sbjct: 1277 SGAVSLNSTCTLNIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVT 1325
Query: 144 ATDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
ATD+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1326 ATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQ 1382
Query: 195 QSPSR 199
P R
Sbjct: 1383 GRPPR 1387
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
++YSI+ G+ + R ++SGV+ T +DREE Y L I ATD
Sbjct: 711 IKYSISAGDRS-------------RFQVNAQSGVI-STRMALDREEKTAYQLQIVATDGG 756
Query: 88 GINKA-ETHVTVDVLDENDNSPVFSQKVYRFI----------VGDLKSS---LNSNVSHW 133
+ + VT+ VLD DN PVFSQ Y F+ VG + +S LNSN+S+
Sbjct: 757 NLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFENVALGYHVGSVSASTMDLNSNISYL 816
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 89/175 (50%), Gaps = 29/175 (16%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN H+F++ N T EIR+ +DRE+++QY L++ +
Sbjct: 2686 PNGQLDYEIINGNKEHSFSI-NHATGEIRSIRP------------LDREKISQYVLIVKS 2732
Query: 84 TDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
+D +++ + V +++LDENDN+P FSQ ++ V + NS + + ++ V
Sbjct: 2733 SDRGSPSQSTSVKVIINILDENDNAPRFSQ-IFSAHVPE-----NSPLGY-----TVTRV 2781
Query: 143 SATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
+ +D D A Y + S I P TG+++++ +D + Y + V AHD
Sbjct: 2782 TTSDEDIGVNAISRYSIMDTSLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2836
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ Y+L + ATD KG + T V V VLD NDN+PVF+Q +Y+
Sbjct: 2096 TGELDREEVSNYTLTVVATD-KGHPSLSSSTEVVVMVLDINDNNPVFAQAMYK 2147
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 71/174 (40%), Gaps = 29/174 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ T L T+ IDREE + Y L + A+
Sbjct: 813 ISYLITTGDQKGMFAINQVTGQ-------------LTTASVIDREEQSFYQLKVVAS--G 857
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G ++ V + V D NDNSP F Q V S+N V +W+ SI A D
Sbjct: 858 GTVTGDSMVNITVKDLNDNSPHFLQAV---------ESVNV-VENWQAGHSIFQAKAVDP 907
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSP 197
D V Y L P NL I + G + L G Y++ + A D+ P
Sbjct: 908 DEGVNGMVVYSLKQNPKNLFTINEKNGNISLLGPLDVHAGSYQIEILASDMGVP 961
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1741 GDGSKIMQLTAMDADEGANALVTYTIISGADD-SFRI------------DPESGDLIATK 1787
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND++P FS+ VY F
Sbjct: 1788 -RLDRERRSKYSLLVRADD--GLQSSDMRINITVSDVNDHTPKFSRPVYSF 1835
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 16/115 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + + A + + VRY I GN N F + +S +G
Sbjct: 2152 ENTLTGTDI--IQVFAADGDEGTNGQVRYGIVDGNANQEFRI------------DSVTGA 2197
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
+ V +DRE+ YSL + ATD + +T V++ +LD ND PVF Y
Sbjct: 2198 ITVAK-PLDREKTPTYSLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPY 2251
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 35/177 (19%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKV 114
K+G + V SG +DRE+ + SL + A + ++G + E V V VLD ND PVFS +
Sbjct: 3338 KTGQIYV-SGLLDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND-PPVFSLNI 3395
Query: 115 YRFIVGD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLV 163
Y + + S+ +S+ V W +FS IGS + A
Sbjct: 3396 YSVQISEGVPTGTHVTFVSAFDSDSVPSWSRFSYFIGSGNENGA---------------F 3440
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
I PQTG++ +T + + + Y LTV A D +PS V L+ N P+L
Sbjct: 3441 SINPQTGQITVTAELDRETLPIYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPML 3497
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 26 QLVRYSITQGN--DNHT--FALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVI 81
+L+ T G+ DN T F+L+ T + + SG L S +DREE A YSL++
Sbjct: 588 ELLVLGATDGDLGDNGTVRFSLQEAETDQRSFRLDPVSGRLSTIS-SLDREEQAFYSLLV 646
Query: 82 TATDVKGINKAE-THVTVDVLDENDNSPVF 110
ATD+ ++ + V +LD NDNSPVF
Sbjct: 647 LATDLGSPPQSSMVRINVSLLDINDNSPVF 676
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 42/89 (47%), Gaps = 8/89 (8%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I QGN+ F L N + + + LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIIQGNEAGRFRLD-----ITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KGE 227
Query: 90 NKAETH--VTVDVLDENDNSPVFSQKVYR 116
K + V V V D NDN PVF Y+
Sbjct: 228 PKRRGYLQVNVTVQDINDNPPVFGSSHYQ 256
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 17/90 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y + GN+++ F L S SG L VT +DRE + L+ITATD
Sbjct: 2282 LSYVLFGGNEDNAFTL-------------SASGELQVTQ-SLDRETKEHFVLLITATD-S 2326
Query: 88 GINKAETHVTVDVL--DENDNSPVFSQKVY 115
G T++V+ D NDN P F+ K+Y
Sbjct: 2327 GFPALTGTGTINVIVDDINDNVPTFASKMY 2356
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 49/116 (42%), Gaps = 21/116 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ +GT V ILV +S I GN T NP+T +I
Sbjct: 2362 EDAPTGTDV----ILVNASDIDASTNAVIRIIGGNSQFTI---NPSTGQI---------- 2404
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVY 115
+TS +DRE Y+LV+ A+D + T V V V D NDN P F Y
Sbjct: 2405 --ITSALLDRETKENYTLVVVASDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPY 2458
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 27/123 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
+ YSI +GN F + G L + S ++DRE +Y L++ A+D
Sbjct: 1018 IAYSIAEGNTGDAFGIF-------------PDGQLYIKS-ELDRELQDRYVLLVVASDRA 1063
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
V+ ++ A +VTV + D NDN P+F+ Y F + + S +G VSA
Sbjct: 1064 VEPLS-ATVNVTVILEDVNDNRPLFNSTNYTFYFEE----------EQRPGSFVGKVSAI 1112
Query: 146 DAD 148
D D
Sbjct: 1113 DKD 1115
>gi|62510878|sp|Q5DRC6.1|PCDB8_PANTR RecName: Full=Protocadherin beta-8; Short=PCDH-beta-8; Flags:
Precursor
Length = 801
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 70/149 (46%), Gaps = 24/149 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVG 120
L+T +DRE A+Y++ IT TD+ G TH+ + VL D NDN+P F+Q Y V
Sbjct: 404 LLTETPLDRESRAEYNVTITVTDL-GTPGLTTHLNMTVLVSDVNDNAPAFTQASYTLFVR 462
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P N LV I G
Sbjct: 463 E----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQNPHLPLASLVSINTDNG 512
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 HLFALRSLDYEALQAFEFRVGASDRGSPA 541
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE A+ L +TA D ++ T V ++V+D NDN+P F Q YR
Sbjct: 195 LVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFEQPFYR----- 249
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQ----TGELLL 174
++ S +S +S + VSATD D +++Y L S+ + + TGE+ L
Sbjct: 250 VQISEDSPISFL-----VVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRL 304
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+ + YE+ +EA D
Sbjct: 305 KKQLDFEKFQSYEVNIEARD 324
>gi|410920125|ref|XP_003973534.1| PREDICTED: cadherin-22-like [Takifugu rubripes]
Length = 812
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 20/123 (16%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN---KAETHVTVDVLDENDNSPVF 110
S + +G+++ D+DRE +Y LV+ ATD+ G T VT+ + D NDN P F
Sbjct: 210 SVDRHTGIIMTAVADLDRETQDRYELVVKATDMAGQMGGLSGSTTVTIVITDVNDNPPRF 269
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTG 170
QK+Y+F V + +++ + V H V ATDAD + +++ ++ G
Sbjct: 270 PQKMYQFSVSE-GAAVGTPVGH---------VIATDAD-------MGENTDMTYLIKDGG 312
Query: 171 ELL 173
EL
Sbjct: 313 ELF 315
>gi|269995999|ref|NP_001019303.2| protocadherin beta-8 precursor [Pan troglodytes]
Length = 801
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 70/149 (46%), Gaps = 24/149 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVG 120
L+T +DRE A+Y++ IT TD+ G TH+ + VL D NDN+P F+Q Y V
Sbjct: 404 LLTETPLDRESRAEYNVTITVTDL-GTPGLTTHLNMTVLVSDVNDNAPAFTQASYTLFVR 462
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P N LV I G
Sbjct: 463 E----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQNPHLPLASLVSINTDNG 512
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 HLFALRSLDYEALQAFEFRVGASDRGSPA 541
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE A+ L +TA D ++ T V ++V+D NDN+P F Q YR + +
Sbjct: 195 LVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFEQPFYRAQISE 254
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLV----VIVPQTGELLL 174
+S +S + VSATD D +++Y L S+ + + TGE+ L
Sbjct: 255 -----DSPISFL-----VVKVSATDVDTGVNGEISYSLFQASDEISKTFTVDFLTGEIRL 304
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+ + YE+ +EA D
Sbjct: 305 KKQLDFEKFQSYEVNIEARD 324
>gi|355710326|gb|EHH31790.1| Placental cadherin [Macaca mulatta]
Length = 829
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 252 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 303
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+PVF + Y
Sbjct: 304 DGDGSTTTAVAVVEILDANDNAPVFDPQKY 333
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DREE+A+Y L A G + + ++++ V D+ND+ P F+Q
Sbjct: 159 AVEKETGWLLLNKP-LDREEIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQ 217
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+R V L+ L +S+ V+ATD D
Sbjct: 218 DTFRGSV--LEGVLPG--------TSVMQVTATDED 243
>gi|297747350|ref|NP_001177099.1| FAT tumor suppressor homolog 1 [Sus scrofa]
Length = 4588
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 88/195 (45%), Gaps = 25/195 (12%)
Query: 23 HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVIT 82
H V Y I GN F + NP + I +T +D E + Y+L I
Sbjct: 1692 HSQSSVIYEIKDGNIADAFDI-NPHSGSI------------ITQKALDFETLPVYTLTIQ 1738
Query: 83 ATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
T++ G++ T V V + DENDNSPVF Q Y +V + +S+NS V + + +
Sbjct: 1739 GTNMAGLS-TNTTVLVHLQDENDNSPVFMQSEYTGLVSE-SASINSVVLTDRNVPLV--I 1794
Query: 143 SATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQ 195
ATDAD + + Y + PS I TG + +L+ D + + TV+ HD+
Sbjct: 1795 RATDADKESNALLVYHIVEPSIHKYFAIDSSTGAIHTVLSLD-YEETSTFHFTVQVHDMG 1853
Query: 196 SPSRYAREPAQVWLQ 210
P +A A V +
Sbjct: 1854 IPRLFAEYAANVTIH 1868
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 91/199 (45%), Gaps = 32/199 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + YSI GN++ F++ +SK+G + + +
Sbjct: 3246 GTEVLQVYAASRDIEANAEITYSIISGNEHGKFSI------------DSKTGAIFIIE-N 3292
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L + ATD ++ T V ++V D NDN+PVFSQ Y ++ + + L
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVAT-VNINVTDINDNTPVFSQDTYTAVISE-DAVL 3350
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
S+ +V A DADG + Y + + I P GE+ +T +
Sbjct: 3351 E---------QSVITVMADDADGPSNSHIHYSIIDGNQGSPFTIDPARGEVKVTRLLDRE 3401
Query: 182 DVE-YELTVEAHDLQSPSR 199
V Y LTV+A D SP R
Sbjct: 3402 AVSGYTLTVQASDNGSPPR 3420
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 91/199 (45%), Gaps = 24/199 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + +P +RY I G++ + F + + +R T+
Sbjct: 45 ENSAAKTYV-GHPVKMGIYITNPLWELRYKIVSGDNENLFKAEEYILGDFCFLRIRTKGG 103
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A T V V VLD ND P+FS Y
Sbjct: 104 NTAIL------NREVKDHYTLIVKAVEKTTNAEARTKVRVQVLDTNDLRPLFSPTSYSV- 156
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 157 ------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGAVVLT 207
Query: 176 GDPPSDDVE-YELTVEAHD 193
G + + YEL + A D
Sbjct: 208 GRLDYTEAKLYELEILAVD 226
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1174 LTYKITSGNPQGFFSIS------------PKTGLITTTSRKLDREQQDEHILEVTVTDNG 1221
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRF 117
K+ V V +LDENDN P F QK Y+
Sbjct: 1222 SPPKSTIARVIVKILDENDNKPQFLQKFYKI 1252
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 79/175 (45%), Gaps = 36/175 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N I+N + + +DRE+ Y L ITATD
Sbjct: 2954 VTYYITGGDPLGQFAVEN-----IQNEWK------VYVKKPLDREKRDNYLLTITATD-- 3000
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS--IGSVSAT 145
G ++ V V VLD NDNSP+ + +Y S++ F I VSAT
Sbjct: 3001 GTFSSKAIVEVKVLDANDNSPICEKTLY------------SDMIPEDAFPGKLIMQVSAT 3048
Query: 146 DAD---GDKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHD 193
DAD ++ Y L P + + P TGEL + P D E Y L V+A D
Sbjct: 3049 DADIRSNAEITYTLFGPGAEKFKLNPDTGELKTSA--PLDREEQATYNLLVKATD 3101
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 111/271 (40%), Gaps = 47/271 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
L TS +DREE A Y+L++ ATD G + ++ + + D NDN+P FS Y V
Sbjct: 3079 LKTSAPLDREEQATYNLLVKATDGGG-RFCQANIVLTLEDVNDNAPEFSADPYTITV--- 3134
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVIVPQTGELLLTGDPP 179
+ + + + V ATDAD K++Y L ++ + + ++ P
Sbjct: 3135 -------FENTEPGTLLTRVQATDADAGLNRKISYSLIDSADGQFSINEVSGIIQLEKPL 3187
Query: 180 SDDVE--YELTVEAHDLQSPSRYAREPAQVW----LQFNSPVLQDEQLLQMIDRKSEAPH 233
+++ Y L+++A D P R V + N PV + + + +
Sbjct: 3188 DRELQAVYTLSLKAVDHGLPRRLTATGTVVVSVLDINDNPPVFEYREYGATVSE--DVLI 3245
Query: 234 RIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDV 293
E +V A R D E I +++ E KF I + I + EN D
Sbjct: 3246 GTEVLQVYAASR----------DIEANAEITYSIISGNEHGKFSIDSKTGAIFIIENLDY 3295
Query: 294 RVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
E + ++++T+ +AT+GG
Sbjct: 3296 -------------ESSHEYYLTV--EATDGG 3311
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E+ Q+ + + A D G+ +E VTVDV D ND+SP+F Q VY ++ +
Sbjct: 2348 LDYEQFQQHKIFVRAVD-GGMPPLSSEVIVTVDVTDLNDHSPLFDQPVY-------EAKI 2399
Query: 127 NSNVSHWKKFSSIGSVSATDADGDKVAYKL 156
+ + +H + + + A +D DK+ Y +
Sbjct: 2400 SEHAAHGHFVTCVKAYDADSSDIDKLEYSI 2429
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN F + +P E++ + +DRE V+ Y+L + A+D
Sbjct: 3370 IHYSIIDGNQGSPFTI-DPARGEVK------------VTRLLDREAVSGYTLTVQASDNG 3416
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+PVFS+ + I+
Sbjct: 3417 SPPRVNTTTVNIDVSDINDNAPVFSKGNHSVII 3449
Score = 41.2 bits (95), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 14/87 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GN++ F + + ++GVL + S +DRE +YSL IT +D+
Sbjct: 754 YAISGGNEDSCFII------------DMETGVLKILS-PLDRETTDRYSLNITVSDLGLP 800
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVY 115
KA + + VLD NDN P F Q+ Y
Sbjct: 801 QKAAWRLLEIRVLDANDNPPEFLQESY 827
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 107/253 (42%), Gaps = 42/253 (16%)
Query: 50 EIRNSTESKSGV----------LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTV- 98
EI S SGV ++ TS +DRE + Y L I A+D +G+ + V V
Sbjct: 1068 EIHYSIRDGSGVGVFKIDEETGVIETSDRLDRESTSHYWLTIYASD-QGVVPLSSFVEVY 1126
Query: 99 -DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAY 154
+V D NDN+P S+ VY + + + K S+ + A D D DK+ Y
Sbjct: 1127 IEVEDVNDNAPQTSEPVYYPEI----------MENSPKDVSVVQIEAFDPDSSSDDKLTY 1176
Query: 155 KLAV--PSNLVVIVPQTGELLLTG---DPPSDDVEYELTVEAHDLQSP--SRYAREPAQV 207
K+ P I P+TG + T D D E+ L V D SP S AR ++
Sbjct: 1177 KITSGNPQGFFSISPKTGLITTTSRKLDREQQD-EHILEVTVTDNGSPPKSTIARVIVKI 1235
Query: 208 WLQF-NSP-VLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVF 265
+ N P LQ +++ +R+ R KR P R+ ++ D I +
Sbjct: 1236 LDENDNKPQFLQKFYKIRLPEREKPERERSSKR------EPLYRVIATDKDEGPNAEISY 1289
Query: 266 ALEKETEREKFKI 278
++E+ E KF I
Sbjct: 1290 SIEEGNEHGKFFI 1302
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
I R++ + + L +T +D KA T V V VL N + P F+Q YR +S +
Sbjct: 426 IKRQQASHFELEVTTSD----RKASTRVLVKVLSANSHPPEFTQTAYR-------ASFDE 474
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT 188
NV S+ +V + + V Y +A +++ ++ + T S++++YEL
Sbjct: 475 NVPIGTTVMSVSAVDPDEGENGYVTYSIANVNHVPFVIDHFSGAVST----SENLDYELM 530
Query: 189 VEAHDLQ 195
+ L+
Sbjct: 531 PRVYTLR 537
>gi|395817802|ref|XP_003782339.1| PREDICTED: protocadherin gamma-A6 [Otolemur garnettii]
Length = 810
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 16/100 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT+ +DREEV+ Y++ +TATD KG+ ET ++V V D NDN P FS +Y V
Sbjct: 404 LVTNSFLDREEVSLYNITVTATD-KGMPPLSTETLISVKVADTNDNPPAFSHSLYSVYVP 462
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA 157
+ + K +SI SV A D D + +V+Y LA
Sbjct: 463 E----------NNPKGASIFSVKAHDPDSEENARVSYSLA 492
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 71/140 (50%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE A + LV+TA D + + + V VLD NDN+PVF+Q +YR
Sbjct: 194 LVLEHALDREEEAVHHLVLTAMDGGDPVRSSVARILVTVLDVNDNAPVFTQSIYRV---- 249
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA-VP---SNLVVIVPQTGELLL 174
S+ N+S + + SV+ATD D +V Y +P S + + TGE+
Sbjct: 250 ---SVPENLSVG---TPVLSVNATDQDEGVHAEVTYSFVKIPEKISQIFCLNVLTGEIST 303
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+ + +D YEL VEA D
Sbjct: 304 SANLDYEDSSFYELDVEARD 323
>gi|291242490|ref|XP_002741140.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
[Saccoglossus kowalevskii]
Length = 2761
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 50/90 (55%), Gaps = 13/90 (14%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVK---GINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
++ T +DRE V QY + + A D+ G A T VTVD+LDENDN P FSQ+ Y I
Sbjct: 454 VITTRSRLDRETVVQYIIEVLAVDLGSNPGPQSASTEVTVDILDENDNYPQFSQRTYEVI 513
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + S++ NV I S+ ATD D
Sbjct: 514 IPE---SISPNV-------VIESIIATDRD 533
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 83/162 (51%), Gaps = 21/162 (12%)
Query: 40 TFALKN-PTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK-AETHVT 97
T+++ N PT + S SG ++VT+ ++DRE ++Y V A D K A T ++
Sbjct: 646 TYSISNAPTGNPF--SINENSG-MIVTTRELDRETTSRYDFVAVAQDQGDPPKSATTQIS 702
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD-KVAYKL 156
+ +LD NDN P F+Q Y +V + + +S+ +V+ATDAD + V+Y++
Sbjct: 703 ITILDVNDNPPTFTQSEYNVVVEE----------DARPGTSVATVTATDADEESSVSYQI 752
Query: 157 AVPS--NLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHD 193
+ N I+ Q G +++ P D + + LTV A D
Sbjct: 753 TAGNTRNRFSIISQMGLGVISVALPLDYKQEQRFVLTVTASD 794
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 18/111 (16%)
Query: 40 TFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA--ETHVT 97
T+++ N EI T + ++T ++DRE Y+L +TA D G+ T V
Sbjct: 853 TYSMDNIPEFEIDEDTGA-----ILTKMELDRETKLSYTLHVTAQD-NGLKPQLDTTDVE 906
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ V+D NDN PVF + YR G+++ ++ K +S+ +SA DAD
Sbjct: 907 ITVIDVNDNYPVFKESSYR---GEIREDVS-------KGTSVIRISAEDAD 947
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 17/90 (18%)
Query: 28 VRYSITQGND-NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+RY+ + G+D N F + +S SG L+ T +DREEVA Y+L ATD
Sbjct: 954 IRYTFSGGDDGNGAFII------------DSNSG-LIRTDARLDREEVAVYNLEAYATD- 999
Query: 87 KGINKAETHVTVDVL--DENDNSPVFSQKV 114
+G + T V +++ D NDNSP F V
Sbjct: 1000 RGTPQRRTSVNIEITVKDVNDNSPKFRSAV 1029
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 31/177 (17%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I+ + + +V +SI G D FAL + +SG
Sbjct: 1036 ENSPIGSLVD--TIVATDPDEGMNAVVAFSIV-GGDEQFFAL------------DYQSG- 1079
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L TS +++ EE +Y +++ AT N A + + V+D+NDN P I+ D
Sbjct: 1080 QLTTSAEMNYEERNEYEVIVRATSTPLFNDAV--IKIHVIDQNDNIP---------IIND 1128
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKL--AVPSNLVVIVPQTGELLLT 175
N N + IGSV A D D D++ Y + ++L+ I TG + L+
Sbjct: 1129 FAIVFN-NFEDYFPTGEIGSVPAHDPDVMDQLKYSIIRGNDASLIHINSSTGGIKLS 1184
>gi|351698157|gb|EHB01076.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Heterocephalus
glaber]
Length = 3767
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 75/153 (49%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 380 DPRSG-LISTSGRVDREHMESYELVVEASDQGKEPGPRSATVRVHITVLDENDNAPQFSE 438
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSN--LVVIVP 167
K Y V ++ ++ + + + V+ATD D D V Y + ++ I
Sbjct: 439 KRY---VAQVREDVHPH-------TVVLRVTATDRDKDANGLVHYNIISGNSHGHFAIDS 488
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 489 LTGEIQVVA--PLDFEAEREYALRIRAQDAGRP 519
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 76/279 (27%), Positives = 115/279 (41%), Gaps = 51/279 (18%)
Query: 42 ALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDV 100
AL N + E+ S + SG L+ T+ +DRE + ++ L +TA D A T V V V
Sbjct: 257 ALMNSRSLELF-SIDPHSG-LIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTV 314
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLA 157
D ND+SPVF Q YR +L NV ++ I + ATD D A Y+
Sbjct: 315 ADRNDHSPVFEQAQYR-------ETLRENV---EEGYPILQLRATDGDAPPNANLHYRFV 364
Query: 158 VPSNLVV-------IVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL 209
P I P++G + +G + +E YEL VEA D +EP
Sbjct: 365 GPPAARTAAAAAFEIDPRSGLISTSGRVDREHMESYELVVEASD------QGKEPGP--- 415
Query: 210 QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGRI 263
S ++ + ++D AP EKR V + V P R+ ++ D + G +
Sbjct: 416 --RSATVRVH--ITVLDENDNAPQFSEKRYVAQVREDVHPHTVVLRVTATDRDKDANGLV 471
Query: 264 VFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ + F I G+++V DFE
Sbjct: 472 HYNIISGNSHGHFAID--------SLTGEIQVVAPLDFE 502
Score = 43.9 bits (102), Expect = 0.11, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN + FA+ +S +G + V + +D E
Sbjct: 456 LRVTATDRDKDANGLVHYNIISGNSHGHFAI------------DSLTGEIQVVA-PLDFE 502
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y+L I A D ++ ++ V+D ND++P+F ++ V + + L +V
Sbjct: 503 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLE-NAPLGHSV 561
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKLA--VPSNLVVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L P VI TG + ++G + VE Y
Sbjct: 562 IH------IQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGSLDRESVEHYFF 615
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 616 GVEARDHGSP 625
Score = 43.5 bits (101), Expect = 0.14, Method: Composition-based stats.
Identities = 53/180 (29%), Positives = 81/180 (45%), Gaps = 32/180 (17%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 969 ENSIVGSVVA--QITAVDPDEGPNAHIMYQIVEGNIPELFQM------------DIFSGE 1014
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L D+D E +Y +V+ AT +++A HV ++D+NDNSPV + +
Sbjct: 1015 LTALI-DLDYEACQEYLIVVQATSAPLVSRATVHVR--LIDQNDNSPVLN---------N 1062
Query: 122 LKSSLNSNVS-HWKKFSS--IGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
+ N+ VS H F S IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1063 FQILFNNYVSNHSDTFPSGIIGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1122
Score = 43.5 bits (101), Expect = 0.15, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 62/135 (45%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D + A VTV VLD NDN P F+ K Y
Sbjct: 602 SGSLDRESVEHYFFGVEARDHGSPLLSASASVTVTVLDVNDNRPEFTMKEYHL------- 654
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
LN + + +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 655 RLNEDAA---VGTSVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLD 711
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 712 YKQERYFKLVLTASD 726
Score = 39.3 bits (90), Expect = 2.4, Method: Composition-based stats.
Identities = 58/218 (26%), Positives = 86/218 (39%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 872 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 919
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V Y L A D +G+ T V++ V D NDN+PVF + + V + NS V
Sbjct: 920 AVPVYELTAYAVD-RGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE-----NSIV 973
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSDDV-E 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 974 G-----SVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEACQE 1028
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR + NSPVL + Q+L
Sbjct: 1029 YLIVVQATSAPLVSRATVHVRLIDQNDNSPVLNNFQIL 1066
Score = 38.5 bits (88), Expect = 4.8, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKV 114
++ SG + + + +D E+ Y+L ITA D KA+T +V V V D NDN+P F
Sbjct: 798 DADSGAITLQA-PLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASH 856
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
Y +V + F+S+ +SATD D
Sbjct: 857 YTGLVSE----------DAPPFTSVLQISATDRDA 881
>gi|432896879|ref|XP_004076361.1| PREDICTED: protocadherin Fat 3-like [Oryzias latipes]
Length = 4672
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 121/290 (41%), Gaps = 49/290 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS++GT V LP+ +RYSI G+ TF + T
Sbjct: 1036 ENSRAGTSV--LPVTAKDDDNGRDGTLRYSIRGGSGLGTFTIDEDTG------------- 1080
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIV 119
++ T+G +D E Y L + ATD +G A V +++ D NDN+P+ S +Y ++
Sbjct: 1081 MIYTAGILDCETKDSYWLTVVATD-RGATPLSASVEVFIEIEDVNDNAPLTSDPIYHPVI 1139
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAV--PSNLVVIVPQTGELL 173
+ + K S+ + A D D +++Y++ P N I P+TG +
Sbjct: 1140 ----------MENSPKDVSVIQIQAQDPDLSTKPSRLSYRITAGNPQNFFSINPRTGLIT 1189
Query: 174 LTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRK---SE 230
T + + E +E + SP + VW+ + ++DE D + E
Sbjct: 1190 TTARKLDREQQAEHFLEVTVIDSP--VTTRQSTVWVIVH---IEDEN-----DNRPTFPE 1239
Query: 231 APHRIE--KRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKI 278
A +RI +R R V P R+ + D G I +++ E + + I
Sbjct: 1240 ATYRISLPERDRNRRVEPVYRVFAYDRDSGANGNITYSITDGNEEDNYSI 1289
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 62/129 (48%), Gaps = 23/129 (17%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
++LV + IT GN FAL E K + SG +DRE+ Y L ITA+
Sbjct: 2957 NRLVSFYITGGNQRGVFALA-------LVQGEWK----VYVSGLLDREQQDYYLLNITAS 3005
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
D G+ A T V V V+D NDNSP+ Q VY +S ++ K I +VSA
Sbjct: 3006 D--GLYVAHTAVEVTVMDANDNSPICKQAVY-------SASFPEDILTNK---GILTVSA 3053
Query: 145 TDADGDKVA 153
TDAD A
Sbjct: 3054 TDADSGSSA 3062
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 78/173 (45%), Gaps = 24/173 (13%)
Query: 28 VRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
V+YSI G+ F + + +R T SG L +RE Y+L + A+
Sbjct: 65 VKYSIESGDSESIFQAEEFVVGDFCFLRICTNGGSGATL------NREVQDNYTLTVKAS 118
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
G+ +A V + VLD ND P+FS Y F+V + + L ++IG V+A
Sbjct: 119 AQGGL-EALVTVFIKVLDTNDLRPLFSPTFYSFVVSE-SAPLG---------TTIGRVTA 167
Query: 145 TDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
TDAD + Y L + P +G + LTG P D ++ EL V+ D
Sbjct: 168 TDADVGSNGEFYYFFKNTVELFSVHPTSGFITLTGRPRIDKLDKLELEVQVID 220
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 89/204 (43%), Gaps = 32/204 (15%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G + L +L S+ P+ + Y+I GN+ F + K G + V +
Sbjct: 3251 AVGTEVLRVLATSADIGPNAEITYTIRSGNELGKFIINR------------KLGSISV-A 3297
Query: 67 GDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
D+D E Y + + A D ++ A T V ++++D NDN+P F Q VY ++ + +
Sbjct: 3298 DDLDFEVCKDYYITVEAWDSGNPPLSTA-TMVVIELMDVNDNAPTFDQDVYNVLISE-DA 3355
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP--SNLVVIVPQTGELLLTGDPP 179
S+ V+ VSA D D ++ Y + SN I P TG L +
Sbjct: 3356 SVGQTVTR---------VSAEDLDSQVNGRITYSILKGDRSNHFWIDPVTGLLKVNKKLD 3406
Query: 180 SDDVE-YELTVEAHDLQSPSRYAR 202
+ V Y L+V+A D SP+ R
Sbjct: 3407 RELVSMYTLSVQAFDSGSPAMSTR 3430
Score = 44.3 bits (103), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 14/117 (11%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
MENS V + P +L Y IT GN + F++ NP ++G
Sbjct: 1140 MENSPKDVSVIQIQAQDPDLSTKPSRL-SYRITAGNPQNFFSI-NP-----------RTG 1186
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYR 116
++ T+ +DRE+ A++ L +T D + T V V + DENDN P F + YR
Sbjct: 1187 LITTTARKLDREQQAEHFLEVTVIDSPVTTRQSTVWVIVHIEDENDNRPTFPEATYR 1243
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 42/222 (18%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
MENS SGT V V + + P + + IT+GN+ +F++ T G
Sbjct: 1663 MENSNSGTHVT----TVTALSRSP---LIFDITRGNEERSFSINQHT------------G 1703
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
V+ T +D E A Y L++ A + G+ +A V V V D NDN P Q Y V
Sbjct: 1704 VI-TTRKMLDFELTASYFLMVRALSMAGV-EASAAVIVQVGDINDNPPELLQIRYAGRVS 1761
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPS 180
+ ++L ++V + + + + ATD D + A + I+ +T + + D +
Sbjct: 1762 E--AALVNSVVLGEDGNPL-VIQATDKDRNHNAMLV------FQIIDETARMFFSVDSGT 1812
Query: 181 DDV------------EYELTVEAHDLQSPSRYAREPAQVWLQ 210
+ E+ V+ D PS A PA+V+++
Sbjct: 1813 GSIRTIANLDYETFSEFLFRVQVQDSGEPSLCADSPAEVFIK 1854
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
L T+ +DRE V Y+L+ ATD G+ + +++ VLD NDN+P+FS Y
Sbjct: 3085 LRTATVMDRELVPTYNLIAQATDGGGL-FCRSDISLKVLDVNDNAPLFSSTHY 3136
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 70/178 (39%), Gaps = 19/178 (10%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK-AET 94
N+ + L NP R + G +L T DREE Y LV+ + + K A
Sbjct: 1998 NEPLKYTLLNPGG---RFAIRPTCGAVLTTGVPFDREENESYELVVEVSREDEVLKVARV 2054
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDK 151
V V V D NDN P F Y V S I VSA D D +
Sbjct: 2055 TVQVQVEDVNDNVPEFVNLPYYAAVQ----------VEAVPGSVIFRVSAVDRDYGPNGE 2104
Query: 152 VAYKLAVPSNLVVIVPQTGELLLTGDPPSD--DVEYELTVEAHDLQSPSRYAREPAQV 207
V Y L + I P TGEL+L ++ + EY+LTV A D P + P V
Sbjct: 2105 VTYSLKMQQRNFEINPVTGELILKRAFGANLSNTEYKLTVVATDGGFPRLSSEVPLPV 2162
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVF 110
S +S SGV+++ +DRE Y + ATD +G ++ +T+ VLD NDN+PVF
Sbjct: 3179 SIDSLSGVVILEK-SLDRESQESYRIRAQATDRVGQQGAMSSQVDLTILVLDVNDNAPVF 3237
Query: 111 SQKVY 115
++ Y
Sbjct: 3238 QKRDY 3242
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV + +D E + Y++ + TD G + A V + V D NDN PVFSQ Y V +
Sbjct: 1397 LVVAKPLDAEVQSVYNMTVQVTD--GTSFATAQVFIRVQDSNDNPPVFSQPTYDVTVSE 1453
>gi|426382651|ref|XP_004057917.1| PREDICTED: cadherin-3 isoform 1 [Gorilla gorilla gorilla]
Length = 829
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 252 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 303
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+PVF + Y
Sbjct: 304 DGDGSTTTAVAVVEILDANDNAPVFDPQKY 333
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DREE+A+Y L A G + + ++++ V D+ND+ P F+Q
Sbjct: 159 AVEKETGWLLLNK-PLDREEIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQ 217
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAV 158
+R V L+ L +S+ V+ATD D Y V
Sbjct: 218 DTFRGSV--LEGVLPG--------TSVMQVTATDEDDAIYTYNGVV 253
>gi|157649921|gb|ABV59346.1| protocadherin mu7 [Callorhinchus milii]
Length = 981
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 26/166 (15%)
Query: 38 NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHV 96
N FAL E+++S + V LV +DRE+ A + L++TA D ++ T V
Sbjct: 194 NEHFAL------EVQSSGDDSRHVYLVLENHLDREQKASHHLLLTAIDGGTPERSGTTQV 247
Query: 97 TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD-----K 151
+ VLD NDN+PVF Q Y+ +L NV + + ++ATD D + K
Sbjct: 248 IISVLDVNDNAPVFDQTFYKI-------NLKENVPVG---TIVTKLNATDVDENINSEIK 297
Query: 152 VAYKLAVP---SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
++ P L I P+TGE+ + G ++ YE+ VEA D
Sbjct: 298 YSFSNLTPKRVGQLFSIEPKTGEIRVKGAIDFEEANVYEIIVEAKD 343
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 13/130 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+ S DN + + P+ + + LVT +DRE +A+Y + I+ D+
Sbjct: 388 LISVSDQDSGDNGRASCRLPSNLPFELKSTFTNSYTLVTRYAMDRETMAEYHIDISCRDM 447
Query: 87 KGINKAETHVT--VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
G ++ T + V D NDN P FS+ +Y ++ +N +S+GSVSA
Sbjct: 448 -GTPPLSSNATIQIQVSDINDNPPRFSENLYTV------HAMENN----PPGASVGSVSA 496
Query: 145 TDADGDKVAY 154
D D + A+
Sbjct: 497 LDPDMGQNAH 506
>gi|397487018|ref|XP_003814611.1| PREDICTED: cadherin-3 isoform 3 [Pan paniscus]
Length = 774
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 197 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 248
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+PVF + Y
Sbjct: 249 DGDGSTTTAVAVVEILDANDNAPVFDPQKY 278
>gi|348514397|ref|XP_003444727.1| PREDICTED: protocadherin gamma-C5-like [Oreochromis niloticus]
Length = 1503
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 121/285 (42%), Gaps = 58/285 (20%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G++DRE V +YS+VI ATD ++ + V V D NDN+P FSQ Y + +
Sbjct: 944 LVTAGNLDRETVPEYSVVIKATDAGSPPLSSQINFVVKVSDVNDNAPTFSQPSYSVDISE 1003
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPS--------NLVVIVPQTG 170
N+ S + I VSATD D V+Y + +PS + V I P++G
Sbjct: 1004 -----NNAPS-----APIAVVSATDPDLGENAHVSYSI-LPSMVQGSPISSYVYINPKSG 1052
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQF---NSPVL------QDEQ 220
+ + ++ + + V+A D P R + V++ N+PV+ +D++
Sbjct: 1053 HIYSMRSLDHEQLKAFRIEVQAEDAGVPPRTSNVTVHVFVVDVNDNAPVIVHPSYSKDKR 1112
Query: 221 LLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRD 280
L + + H I K A D + +++ F+I
Sbjct: 1113 LELTVAPSASPGHLINKLVAVDA------------DSGHNAWLFYSIAPGPNAGMFRIGA 1160
Query: 281 ENPWITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGGP 325
GD+R ++WD EE G T D V I + NG P
Sbjct: 1161 HT--------GDLRTARKWDEEESG--STYDIVVIIQD---NGDP 1192
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 22/147 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE A + L++TA D K+ T + +D+LD NDN+PVF + V + + +
Sbjct: 731 LVVDKALDRERQASFRLLLTAVDGGQPEKSGSTLLLIDILDVNDNAPVFDEPVKKVTLLE 790
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLA--VPS---NLVVIVPQTGEL 172
++L + V+ V+A+DAD GD ++Y + P NL + ++GE+
Sbjct: 791 -NAALGTLVTK---------VNASDADSGSNGD-ISYLFSKYTPQHVLNLFTVDSKSGEI 839
Query: 173 LLTGDPPSDDVE-YELTVEAHDLQSPS 198
+ G +++ Y +TV+A D SP+
Sbjct: 840 RVKGVVDYEEMNAYHITVQARDGGSPA 866
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE + +++TA D + T +T+ VLD NDN PVF + +Y+ +G+
Sbjct: 194 LVLEKPLDRERKTVHKILLTALDGGNPVRSGTTQITISVLDINDNFPVFEKNLYKVSLGE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA--VPSNLVVIV---PQTGELL 173
S+ V K A+DAD ++ + P +++ + P TGE++
Sbjct: 254 --KSIQGTVVIQPK--------ASDADEGLNGEITFSFGSRTPDSVLSVFDINPSTGEII 303
Query: 174 LTGDPPSDDVE-YELTVEAHDLQSP 197
L G+ + + Y++ V A D SP
Sbjct: 304 LKGELDYETAKSYDIDVTAKDKGSP 328
>gi|301769907|ref|XP_002920372.1| PREDICTED: protocadherin Fat 4-like [Ailuropoda melanoleuca]
gi|281339428|gb|EFB15012.1| hypothetical protein PANDA_009099 [Ailuropoda melanoleuca]
Length = 4980
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 85/185 (45%), Gaps = 40/185 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+ YS+ +GN+ FA+ +S SG V L+ G +D E YSLVI A D
Sbjct: 1244 LIHYSVMKGNEERQFAI------------DSTSGQVTLI--GKLDYEATPAYSLVIQAVD 1289
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
++ T + +D+LDENDN+P F KS+L +V + + SV+
Sbjct: 1290 SGAVSLNSTCTLNIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVT 1338
Query: 144 ATDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
ATD+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1339 ATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQ 1395
Query: 195 QSPSR 199
P R
Sbjct: 1396 GRPPR 1400
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+ YSI+ GN+ FA+ S +GVL + +D E ++ + I+ATD
Sbjct: 3123 LISYSISSGNEEGIFAIN------------SSTGVLTLAKA-LDYELCQKHEMTISATDG 3169
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+++ VTV+V+D NDNSPVF Y V + + +++ ++AT
Sbjct: 3170 GWVSRTGYCSVTVNVIDVNDNSPVFFPDEYFPTV----------LENAPSGTTVIHLNAT 3219
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
DAD +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 3220 DADSGTNAVIAYTIQSSDSDLFVIDPNTGVITTQG---FLDFETKQSYHLTVKAFNVPDE 3276
Query: 198 SRYAREPAQVWLQ 210
R + + L+
Sbjct: 3277 ERCSFATVNIQLK 3289
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 84/176 (47%), Gaps = 31/176 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN H+FA+ N T EIR+ +DRE++ QY L I +
Sbjct: 2699 PNGQLDYEIVNGNKEHSFAI-NHATGEIRSIRP------------LDREKIPQYVLTIKS 2745
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D KG T V V ++LDENDN+P FSQ ++ NS + + ++
Sbjct: 2746 SD-KGSPSQSTSVKVIINILDENDNAPRFSQIFSAYV------PENSPLGY-----TVTR 2793
Query: 142 VSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ +D D A Y + S I P TG+++++ +D + Y + V AHD
Sbjct: 2794 VTTSDEDIGINAVSRYSITDTSLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2849
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 72/174 (41%), Gaps = 29/174 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ T H L T+ IDREE + Y L + A+
Sbjct: 826 ISYLITTGDQKGMFAINQVTGH-------------LTTASVIDREEQSFYQLKVVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V D NDNSP F Q V S+N V +W+ SI A D
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAV---------ESVNV-VENWQAGHSIFQAKAVDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSP 197
D V Y L P NL I + G + L G Y++ + A D+ P
Sbjct: 921 DEGVNGMVLYSLKQNPKNLFTINEKNGNISLLGPLDVHAGSYQIEILASDMGVP 974
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
++YSI+ G+ + R ++SGV+ T +DREE Y L I ATD
Sbjct: 724 IKYSISAGDRS-------------RFQVNAQSGVI-STRMALDREEKTAYQLQIVATDGG 769
Query: 88 GINKA-ETHVTVDVLDENDNSPVFSQKVYRFI----------VGDLKSS---LNSNVSHW 133
+ + VT+ VLD DN PVFSQ Y F+ VG + +S LNSN+S+
Sbjct: 770 NLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFENVALGYHVGSVSASTMDLNSNISYL 829
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 85/189 (44%), Gaps = 28/189 (14%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVL-LVTSGDIDREEVAQYSLVITATDVKG 88
Y I QGN+ F L +I + + L LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIIQGNEAGRFRL------DITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KG 226
Query: 89 INKAETH--VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
K + V V V D NDN PVF Y+ V + ++ V SS+ V+A D
Sbjct: 227 EPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE-----DAAVG-----SSVLQVAAAD 276
Query: 147 AD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSPSRY 200
AD + Y+L + P+TG L+T P D +Y LTV+A D PS
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTVQAMDRGVPSLT 334
Query: 201 AREPAQVWL 209
R A + L
Sbjct: 335 GRAEALIQL 343
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ Y+L + ATD KG + T V V VLD NDN+PVF Q +Y+
Sbjct: 2109 TGELDREEVSNYTLTVVATD-KGQPALSSSTEVVVMVLDINDNNPVFVQPLYK 2160
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1754 GDGSKIMQLTAMDADEGANALVTYTIISGADD-SFRI------------DPESGDLIATK 1800
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND+ P FS+ VY F
Sbjct: 1801 -RLDRERRSKYSLLVRADD--GLQSSDMRINITVSDVNDHIPKFSRPVYSF 1848
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 81/177 (45%), Gaps = 35/177 (19%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKV 114
K+G + V SG +DRE+ + SL + A + ++G + E V V VLD ND P+FS +
Sbjct: 3351 KTGQIYV-SGLLDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND-PPIFSLNI 3408
Query: 115 YRFIVGD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLV 163
Y + + S+ +S+ V W +FS IGS + A
Sbjct: 3409 YSIQISEGVPTGTHVTFVSAFDSDSVPSWSRFSYFIGSGNENGA---------------F 3453
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
I PQTG++ +T + + + Y LTV A D +PS V L+ N P+L
Sbjct: 3454 SINPQTGQITVTAELDRETLPIYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVF 110
L T +DREE A YSL++ ATD+ ++ + V +LD NDNSPVF
Sbjct: 641 LSTIASLDREEQAFYSLLVLATDLGSPPQSSMVRINVSLLDVNDNSPVF 689
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + + A + + VRY I GN N F + +S +G
Sbjct: 2165 ENTLTGTDI--IQVYAADGDEGTNGQVRYGIVDGNANQEFRI------------DSVTGA 2210
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
+ V +DRE+ YSL + A D + +T V++ +LD ND P F Y
Sbjct: 2211 ITVAK-PLDREKTPTYSLTVQAADRGSTPRTDTSTVSIVLLDINDFVPTFELSPY 2264
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 107/278 (38%), Gaps = 61/278 (21%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
RYSIT + T NP+T +I V S ++RE+ +Y + ++A D
Sbjct: 2808 RYSITDTSLPFTI---NPSTGDI------------VISRPLNREDTDRYRIRVSAHDSGW 2852
Query: 89 INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
T VT+ V D NDN+P FS+ Y +L + S + VSATD D
Sbjct: 2853 --TVSTDVTIFVTDVNDNAPRFSRPSYYLDCPELP----------EIGSKVTQVSATDPD 2900
Query: 149 ---GDKVAYKLAVPSNLVVIVPQTGELL---------LTGDPPSDDVEYELTVEAHDLQS 196
+V Y + S I TGE+ ++G + + V + D +
Sbjct: 2901 EGSNGQVFYFIKSQSEYFRINATTGEIFNKQVLKYQNVSGFSNVNINRHSFIVTSSDRGN 2960
Query: 197 PSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRR---VTRAVR-PTKRIDF 252
PS + + +D AP ++ + VT+ V+ TK I
Sbjct: 2961 PSLLSETTVTI---------------NTVDSNDNAPQFLKTKYFTPVTKNVKVGTKLIKV 3005
Query: 253 SETDGE---MEGRIVFALEKETEREKFKIRDENPWITV 287
+ D + + + + E KFK+ + WI+V
Sbjct: 3006 TAVDDRDFGLNSEVEYLISNENHFGKFKLDNSTGWISV 3043
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 81/184 (44%), Gaps = 31/184 (16%)
Query: 30 YSITQGND--NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+++T +D N A + + T K+GVL V +DRE + Y+LV+ D+
Sbjct: 1966 FNVTDADDGINSQLAYSIASGDGLGQFTVDKNGVLKVLK-SLDRESQSFYNLVVQVHDLP 2024
Query: 88 GINKAE----THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV- 142
+ + HV++ +LD NDN P F L+ +++ + + I ++
Sbjct: 2025 MLPASRFTSTAHVSIILLDVNDNPPTF---------------LSPKLTYIPENTPIDTIV 2069
Query: 143 ---SATDADG---DKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDL 194
ATD D + Y L P N I GE+ LTG+ ++V Y LTV A D
Sbjct: 2070 FKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDK 2129
Query: 195 QSPS 198
P+
Sbjct: 2130 GQPA 2133
>gi|242012523|ref|XP_002426982.1| hypothetical protein Phum_PHUM288410 [Pediculus humanus corporis]
gi|212511211|gb|EEB14244.1| hypothetical protein Phum_PHUM288410 [Pediculus humanus corporis]
Length = 1635
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 84/189 (44%), Gaps = 44/189 (23%)
Query: 54 STESKSGVLLVTSGD--IDREEVAQYSLVITATDVKGI-NKAETHVTVDVLDENDNSPVF 110
+ +S SG++ V + + DRE +Y L++ A D++G N A + + +LD ND +P F
Sbjct: 534 TIDSMSGIITVATNNHGFDRESAEEYRLLVEAKDMEGRGNMATVPLIIKLLDVNDETPQF 593
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK----VAYKLAVPS--NLVV 164
++ + FI+ + + F++ V ATD D +K V Y++ + N +
Sbjct: 594 EKQTFEFILQ----------PNLRNFTTRAFVKATDRDAEKPNNIVRYEIISGNYDNNFI 643
Query: 165 IVPQTGELLLTG--------DPPSDDVEY-----------------ELTVEAHDLQSPSR 199
+ TGEL + G SDD Y LTV A+DL P R
Sbjct: 644 LNEITGELFIRGKLTSNNLRQSNSDDTYYPGSGPDSDSNGDVLSVIPLTVRAYDLGVPHR 703
Query: 200 YAREPAQVW 208
+ +++
Sbjct: 704 WTHAQVRIY 712
>gi|194219822|ref|XP_001918068.1| PREDICTED: protocadherin beta-18-like [Equus caballus]
Length = 795
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 102/227 (44%), Gaps = 41/227 (18%)
Query: 32 ITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN- 90
I DN F LK PT K+ LVT +DRE A+Y++ IT TD+
Sbjct: 383 ICSIQDNLPFVLK-PTF---------KNFYTLVTERPLDRESRAEYNITITITDMGTPRL 432
Query: 91 KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD 150
K E ++TV V D NDN+P F+Q Y V + NS H IGSVSATD D
Sbjct: 433 KTEHNITVLVSDVNDNAPAFTQTSYTLWVRE----NNSPALH------IGSVSATDTDAG 482
Query: 151 ---KVAYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSR 199
++ Y L P ++LV I G L + ++ +E V A D SP+
Sbjct: 483 ANAQLTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFGVGATDRGSPAL 542
Query: 200 YAREPAQVWL---QFNSP-VLQDEQ-----LLQMIDRKSEAPHRIEK 237
++ +V + NSP VL Q +++ R +EA + + K
Sbjct: 543 SSQARVRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEAGYLVTK 589
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 59/117 (50%), Gaps = 13/117 (11%)
Query: 35 GNDNHTFALKNPTTH-EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE 93
G N+T + NP H +++++ + L+ +DRE+ +++ L +TA D ++
Sbjct: 166 GVQNYTLS-PNPHFHLKLQDNDGGRKYPELLLDQSLDREKESEFRLTLTALDGGSPPRSG 224
Query: 94 TH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
T V V VLD NDN+P F + +Y V + S L+S V VSATD D
Sbjct: 225 TALVRVLVLDINDNAPEFERPIYEVQVPE-NSPLDSLVVQ---------VSATDLDA 271
>gi|149018495|gb|EDL77136.1| cadherin EGF LAG seven-pass G-type receptor 3 [Rattus norvegicus]
Length = 3148
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 480 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 538
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 539 KRY---VAQVREDV-------RPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFAIDS 588
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 589 LTGEIQVMA--PLDFEAEREYALRIRAQDAGRP 619
Score = 54.7 bits (130), Expect = 6e-05, Method: Composition-based stats.
Identities = 88/322 (27%), Positives = 132/322 (40%), Gaps = 67/322 (20%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVR--YSITQGNDNHTFALKNPTTHEIRNSTESKS 59
EN +GT V + V + P + R YS+ AL N + E+ S + +S
Sbjct: 327 ENEAAGTAV----LRVVAQDPDPGEAGRLVYSLA--------ALMNSRSLELF-SIDPQS 373
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFI 118
G L+ T+ +DRE + ++ L +TA D A T V V V D ND++PVF Q YR
Sbjct: 374 G-LIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYR-- 430
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLA-------VPSNLVVIVPQ 168
+L NV ++ I + ATD D A Y+ + I P+
Sbjct: 431 -----ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFVGSPAARTAAAAAFEIDPR 482
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVWLQFNSPVLQDEQLLQMID 226
+G + +G + +E YEL VEA D Q P P ++ + VL D
Sbjct: 483 SGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSATVRVHITVL---------D 528
Query: 227 RKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGRIVFALEKETEREKFKIRD 280
AP EKR V + VRP R+ ++ D + G + + + R F I
Sbjct: 529 ENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFAID- 587
Query: 281 ENPWITVDENGDVRVKKRWDFE 302
G+++V DFE
Sbjct: 588 -------SLTGEIQVMAPLDFE 602
Score = 41.6 bits (96), Expect = 0.44, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y
Sbjct: 702 SGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHL------- 754
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
LN + + +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 755 RLNEDAA---VGTSVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGMGLVTLALPLD 811
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 812 YKQERYFKLVLTASD 826
Score = 41.6 bits (96), Expect = 0.51, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 79/179 (44%), Gaps = 30/179 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I P+ + Y I +GN F + + SG
Sbjct: 1069 ENSIVGSVVA--QITAVDPDDGPNAHIMYQIVEGNIPELFQM------------DIFSGE 1114
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIV 119
L D+D E +Y +V+ AT +++A HV + +D+NDNSPV + Q ++ V
Sbjct: 1115 LTALI-DLDYEARQEYVIVVQATSAPLVSRATVHVRL--VDQNDNSPVLNNFQILFNNYV 1171
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
+ + S + IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1172 SNRSDTFPSGI--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1222
Score = 41.6 bits (96), Expect = 0.56, Method: Composition-based stats.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 556 LRVTATDKDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVMA-PLDFE 602
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y+L I A D ++ ++ V+D ND+SP+F ++ V + + L +V
Sbjct: 603 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHSPIFVSTPFQVSVLE-NAPLGHSV 661
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL-AVPSNL-VVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L V S+ VI TG + ++G + VE Y
Sbjct: 662 IH------IQAVDADHGENSRLEYSLTGVASDTPFVINSATGWVSVSGPLDRESVEHYFF 715
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 716 GVEARDHGSP 725
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 86/218 (39%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 972 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1019
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V Y L A D +G+ T V++ V D NDN+PVF + + V + NS V
Sbjct: 1020 AVPVYELTAYAVD-RGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1073
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1074 G-----SVVAQITAVDPDDGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1128
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 1129 YVIVVQATSAPLVSRATVHVRLVDQNDNSPVLNNFQIL 1166
Score = 38.5 bits (88), Expect = 4.8, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKV 114
++ SG + + + +D E+ Y+L ITA D KA+T +V V V D NDN+P F
Sbjct: 898 DADSGAITLQA-PLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASH 956
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
Y +V + F+S+ +SATD D
Sbjct: 957 YTGLVSE----------DAPPFTSVLQISATDRDA 981
>gi|26335717|dbj|BAC31559.1| unnamed protein product [Mus musculus]
Length = 794
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 13/94 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIVG 120
LVT G +DRE A+Y++ I+ TD+ GI K T +TV V D NDN+P F+Q Y +V
Sbjct: 401 LVTDGALDREIRAEYNITISVTDL-GIPKLTTQHTITVQVSDINDNAPAFTQVSYTMLVH 459
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAY 154
+ NS H IG++SATD+D A+
Sbjct: 460 E----NNSPALH------IGTISATDSDSGSNAH 483
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 51 IRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPV 109
IRN + + LV ++DRE A + L + A D + T + + VLD NDN+P
Sbjct: 180 IRNRGDGRKYPELVLDKELDREVQAAFRLTLAALDGGSPPRTGTSQIRIVVLDVNDNAPE 239
Query: 110 FSQKVYR 116
F+Q YR
Sbjct: 240 FAQAFYR 246
>gi|148728178|ref|NP_444377.3| protocadherin beta 22 precursor [Mus musculus]
gi|13876306|gb|AAK26073.1| protocadherin beta 22 [Mus musculus]
gi|148678202|gb|EDL10149.1| protocadherin beta 22 [Mus musculus]
Length = 794
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 13/94 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIVG 120
LVT G +DRE A+Y++ I+ TD+ GI K T +TV V D NDN+P F+Q Y +V
Sbjct: 401 LVTDGALDREIRAEYNITISVTDL-GIPKLTTQHTITVQVSDINDNAPAFTQVSYTMLVH 459
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAY 154
+ NS H IG++SATD+D A+
Sbjct: 460 E----NNSPALH------IGTISATDSDSGSNAH 483
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 51 IRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPV 109
IRN + + LV ++DRE A + L +TA D + T + + VLD NDN+P
Sbjct: 180 IRNRGDGRKYPELVLDKELDREVQAAFRLTLTALDGGSPPRTGTSQIRIVVLDVNDNAPE 239
Query: 110 FSQKVYR 116
F+Q YR
Sbjct: 240 FAQAFYR 246
>gi|85396890|gb|AAI04818.1| Protocadherin beta 3 [Homo sapiens]
Length = 796
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV+ G +DRE ++Y++ IT TD+ K + ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVSEGALDRETRSEYNITITITDLGTPRLKTKYNITVLVSDVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P S+LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLSSLVSINADNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 LFALRSLDYEALQAFEFRVGAADRGSPA 540
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + SL +TA D ++ T + + VLD NDN+P F+Q +Y V +
Sbjct: 194 LVLDKALDREEQPELSLTLTALDGGSPPRSGTAQINIQVLDINDNAPEFAQPLYEVAVLE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
N+ V+ S I +VSA+D D
Sbjct: 254 -----NTPVN-----SVIVTVSASDLD 270
>gi|395736270|ref|XP_002816041.2| PREDICTED: protocadherin beta-14 isoform 2 [Pongo abelii]
Length = 798
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 83/180 (46%), Gaps = 34/180 (18%)
Query: 32 ITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN- 90
I DN F LK PT K+ LV+ +DRE A+Y++ IT TD+
Sbjct: 382 ICSIQDNLPFFLK-PTF---------KNFFTLVSEKALDRESQAEYNITITVTDLGTPRL 431
Query: 91 KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD 150
K E ++TV V D NDN+P+F+Q Y V + NS H IGS+SATD D
Sbjct: 432 KTEYNITVLVSDVNDNAPIFTQTSYTLFVRE----NNSPALH------IGSISATDRDSG 481
Query: 151 ---KVAYKLAVPS--------NLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPS 198
+V Y L +PS +LV I G L + + E+E V A D SP+
Sbjct: 482 TNAQVTYSL-LPSQDPHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA 540
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 61/136 (44%), Gaps = 23/136 (16%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ L Y+I+ N F +K P + + R E LV +D E+ A+ L +TA
Sbjct: 165 NSLQNYTISP---NSHFYIKIPDSSDRRIYPE------LVLDRALDYEQEAELRLTLTAV 215
Query: 85 DVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D K+ T V + VLD NDN+P F Q +Y V + + + W I ++S
Sbjct: 216 DGGSPPKSGTTLVLIKVLDINDNAPEFPQSLYEVQVPE-----DRPLGSW-----IATIS 265
Query: 144 ATDADG---DKVAYKL 156
A D D K++Y
Sbjct: 266 AKDLDAGNYGKISYTF 281
>gi|66571289|ref|NP_001019302.1| protocadherin beta-14 precursor [Pan troglodytes]
gi|62510887|sp|Q5DRD5.1|PCDBE_PANTR RecName: Full=Protocadherin beta-14; Short=PCDH-beta-14; Flags:
Precursor
Length = 798
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 81/179 (45%), Gaps = 32/179 (17%)
Query: 32 ITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN- 90
I DN F LK PT K+ LV+ +DRE A+Y++ IT TD+
Sbjct: 382 ICSIQDNLPFFLK-PTF---------KNFFTLVSEKALDRESQAEYNITITVTDLGTPRL 431
Query: 91 KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD 150
K E ++TV V D NDN+P F+Q Y + + NS H IGSVSATD D
Sbjct: 432 KTEYNITVLVSDVNDNAPAFTQTSYTLFLRE----NNSPALH------IGSVSATDRDSG 481
Query: 151 ---KVAYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPS 198
+V Y L P ++LV I G L + + E+E V A D SP+
Sbjct: 482 TNAQVTYSLLPPQDPQLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA 540
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 45 NPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDV 100
+P +H +I +S++ K LV +D E+ A+ L +TA D K+ T V + V
Sbjct: 173 SPNSHFYIKIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKV 232
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
LD NDN+P F Q +Y V + + + W I ++SA D D K++Y
Sbjct: 233 LDINDNAPEFPQSLYEVQVPE-----DRPLGSW-----IATISAKDLDAGNYGKISYTF 281
>gi|410983825|ref|XP_003998237.1| PREDICTED: cadherin-3 [Felis catus]
Length = 833
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE V +Y+L I ATD+
Sbjct: 256 VVAYSI------HSQEPKDP--HDLMFTVHRSTGTISVISSGLDRERVPEYTLTIQATDM 307
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+PVF + Y
Sbjct: 308 DGDGSTTTAVAIVEILDANDNAPVFDPQKY 337
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DRE++A+Y L A G + + ++++ V D+ND+ P F+Q
Sbjct: 163 TIEKETGWLLLNK-PLDREKIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQ 221
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
V+R V L+ L +S+ V+ATD D
Sbjct: 222 DVFRGSV--LEGVLPG--------TSVMQVTATDED 247
>gi|149726260|ref|XP_001504135.1| PREDICTED: protocadherin beta-4 [Equus caballus]
Length = 795
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 101/222 (45%), Gaps = 41/222 (18%)
Query: 37 DNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETH 95
DN F LK PT K+ LVT +DRE A+Y++ IT TD+ K + +
Sbjct: 386 DNLPFILK-PTF---------KNFYTLVTESPLDRESQAEYNITITVTDMGSPRLKTQHN 435
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KV 152
+TV V D NDN+P F+Q Y V + NS H IGSVSATD D ++
Sbjct: 436 ITVLVSDVNDNAPAFTQTSYTLWVRE----NNSPALH------IGSVSATDTDAGANAQL 485
Query: 153 AYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREP 204
Y L P ++LV I G L + ++ +E V A D SP+ ++
Sbjct: 486 TYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFGVGATDRGSPALSSQAR 545
Query: 205 AQVWL---QFNSP-VLQDEQ-----LLQMIDRKSEAPHRIEK 237
+V + NSP VL Q +++ R +EA + + K
Sbjct: 546 VRVLVLDANDNSPFVLYPLQNGSAPCTELVPRAAEAGYLVTK 587
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 48/178 (26%), Positives = 76/178 (42%), Gaps = 33/178 (18%)
Query: 28 VRYSITQGND--NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
V Y + Q +D TF++ T EIR + +D E++ Y + I ATD
Sbjct: 276 VSYGLFQASDEIKQTFSIDE-VTGEIR------------LTKILDFEQIKSYHVEIEATD 322
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G++ T V ++V+D NDN+P + SSL S++ + +
Sbjct: 323 GGGLSGKGT-VVIEVVDVNDNAPELTM-----------SSLTSSIPENAPETVVSIFRIR 370
Query: 146 DAD-GDKVAYKLAVPSNLVVIVPQTGE--LLLTGDPPSD---DVEYELTVEAHDLQSP 197
D D GD ++P NL I+ T + L + P D EY +T+ D+ SP
Sbjct: 371 DRDSGDNGKMICSIPDNLPFILKPTFKNFYTLVTESPLDRESQAEYNITITVTDMGSP 428
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 14/117 (11%)
Query: 1 MENSKSGTGVKGLPILVASSHK-HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKS 59
+ENS+ GT P+ +A + L +Y+I+ + H RN +E K
Sbjct: 142 LENSQPGTI---FPLKLAQDLDVGSNGLQKYTISSNSHFHVLT---------RNHSEGKK 189
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVY 115
LV +DREE ++SL + A D ++ T V + ++D NDN+P F Y
Sbjct: 190 YPDLVQDKALDREEQPEFSLTLMALDGGTPPRSGTAMVRILIMDVNDNAPEFVHTTY 246
>gi|14039487|gb|AAK53240.1|AF326315_1 protocadherin-betaV [Mus musculus]
Length = 794
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 13/94 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIVG 120
LVT G +DRE A+Y++ I+ TD+ GI K T +TV V D NDN+P F+Q Y +V
Sbjct: 401 LVTDGALDREIRAEYNITISVTDL-GIPKLTTQHTITVQVSDINDNAPAFTQVSYTMLVH 459
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAY 154
+ NS H IG++SATD+D A+
Sbjct: 460 E----NNSPALH------IGTISATDSDSGSNAH 483
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 51 IRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPV 109
IRN + + LV ++DRE A + L +TA D + T + + VLD N+N+P
Sbjct: 180 IRNRGDGRKYPELVLDKELDREVQAAFRLTLTALDAGSPPRTGTSQIRIVVLDVNENAPE 239
Query: 110 FSQKVYR 116
F+Q YR
Sbjct: 240 FAQAFYR 246
>gi|410956059|ref|XP_003984662.1| PREDICTED: protocadherin Fat 1 [Felis catus]
Length = 4586
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 119/280 (42%), Gaps = 44/280 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I GN F + NP + I VT +D E + Y+L+I T++
Sbjct: 1695 VVYEIKDGNVADAFDI-NPHSGSI------------VTQKALDFETLPIYTLIIQGTNMA 1741
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G++ T V V + DENDN PVF Q Y ++ + +S NS V K + + ATDA
Sbjct: 1742 GLS-TNTSVLVHLQDENDNLPVFMQAEYTGLISE-SASTNSVVLTDKNVPLV--IRATDA 1797
Query: 148 DGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQSPSRY 200
D + + Y + PS I TG + +L+ D + + TV+ HD+ +P +
Sbjct: 1798 DKESNALLVYHIVEPSIHKYFAIDSSTGAIHTVLSLD-YEETSTFHFTVQVHDMGTPRLF 1856
Query: 201 AREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKR------IDFSE 254
A A V +++ID P + + PT R ++ ++
Sbjct: 1857 AEYAANV-------------TIRVIDINDCPPVFSKSLYEASLLLPTYRGVKVITVNATD 1903
Query: 255 TDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVR 294
D ++++++ + EKF + + ITV +R
Sbjct: 1904 ADSSAFSQLMYSITEGNIGEKFFMDHKTGTITVQNTTQLR 1943
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 92/199 (46%), Gaps = 32/199 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + Y+I GN++ F++ +SK+G + + +
Sbjct: 3244 GTEVLQVYAASRDIEANAEITYAIISGNEHGKFSI------------DSKTGAIFIIE-N 3290
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L + ATD ++ T V+++V D NDNSPVFSQ Y ++ + + L
Sbjct: 3291 LDYESSHEYYLTVEATDGGTPSLSDVAT-VSINVTDVNDNSPVFSQDTYTAVISE-DAVL 3348
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
S+ +V A DADG + Y + + I P GE+ +T +
Sbjct: 3349 E---------QSVITVMADDADGPSNSHIRYSITDGNQGSPFTIDPARGEVKVTRLLDRE 3399
Query: 182 DVE-YELTVEAHDLQSPSR 199
+ Y LTV+A D SP R
Sbjct: 3400 TISGYTLTVQASDNGSPPR 3418
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 82/181 (45%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + +P +RY I G++ + F + + +R T+
Sbjct: 43 ENSAAKTYV-GHPVKMGIYLTNPLWELRYRIISGDNENLFKAEEYVLGDFCFLRIRTKGG 101
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A V V VLD ND P+FS Y
Sbjct: 102 NTAIL------NREVKDHYTLIVKAVEKNTNAEARAKVRVQVLDTNDLRPLFSPTSYSV- 154
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 155 ------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKDRTDVFAIHPTSGAIVLT 205
Query: 176 G 176
G
Sbjct: 206 G 206
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYSIT GN F + +P E++ + +DRE ++ Y+L + A+D
Sbjct: 3368 IRYSITDGNQGSPFTI-DPARGEVK------------VTRLLDRETISGYTLTVQASDNG 3414
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+PVFS+ Y I+
Sbjct: 3415 SPPRVNTTTVNIDVSDVNDNAPVFSKGNYSVII 3447
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1172 LTYKITSGNPQGFFSI------------HPKTGLITTTSRKLDREQQDEHILEVTVTDNG 1219
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRF 117
K+ V V +LDENDN P F QK Y+
Sbjct: 1220 SPPKSTIARVIVKILDENDNKPQFLQKFYKI 1250
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 102/247 (41%), Gaps = 43/247 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N I+N + + +DRE+ Y L ITATD
Sbjct: 2952 VTYYITGGDPLGQFAIEN-----IQNEWK------VFVKKPLDREKRDNYLLTITATD-- 2998
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G ++ V V VLD NDNSPV + +Y ++ + K I VSATDA
Sbjct: 2999 GTFSSKAIVEVKVLDANDNSPVCEKSLY-------SETIPEDAFPGKL---IMQVSATDA 3048
Query: 148 D---GDKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHDLQSPSRY 200
D ++ Y L P + + P TGEL P D E Y L V+A D R+
Sbjct: 3049 DIRSNAEITYTLFGPGAEKFKLNPDTGELKTLA--PLDREEQAVYNLLVKATD--GGGRF 3104
Query: 201 AREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEME 260
+ S VL E + S PH I T R+ ++ D +
Sbjct: 3105 CQA---------SIVLTLEDVNDNAPEFSADPHAITVFENTEPGTLLTRVQATDADAGLN 3155
Query: 261 GRIVFAL 267
+I ++L
Sbjct: 3156 RKISYSL 3162
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 14/87 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GN++ F + + ++G+L + S +DRE +Y+L ITA+D+
Sbjct: 752 YAISGGNEDSCFVI------------DMETGMLKILS-PLDRETTDKYTLNITASDLGIP 798
Query: 90 NKAETH-VTVDVLDENDNSPVFSQKVY 115
KA V + VLD NDN P F Q+ Y
Sbjct: 799 QKAAWRLVDIRVLDANDNPPEFLQESY 825
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+ R++ + + L +T +D +A T V V VL N N P F+Q Y K+S +
Sbjct: 424 VKRQQASHFELEVTTSD----RRASTRVLVKVLGANSNPPEFTQTAY-------KASFDE 472
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT 188
NV S+ +V + + V Y +A +++ ++ + T S++++YEL
Sbjct: 473 NVPIGTTVLSVSAVDPDEGENGYVTYSIANLNHVPFVINHFTGAVST----SENLDYELM 528
Query: 189 VEAHDLQ 195
+ L+
Sbjct: 529 PRVYTLR 535
>gi|326671264|ref|XP_003199405.1| PREDICTED: protocadherin Fat 3-like, partial [Danio rerio]
Length = 3394
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 95/223 (42%), Gaps = 46/223 (20%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V I+V + + ++ Y I +GND F + T GV
Sbjct: 1679 ENVAVGTFV----IIVCAISR---SMLIYEIKEGNDERRFKINRYT------------GV 1719
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+ T D D E + Y LVI A ++ GI + T V + V+DENDN PVF Y G
Sbjct: 1720 I-TTQKDFDFEMTSSYILVIQAVNMAGIASSVT-VCIQVVDENDNPPVFQDLTY---TGT 1774
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVV--IVPQTGELLLTGDPP 179
+ + + N + + ATDAD + A L+V IV +T +L T D
Sbjct: 1775 ISEAAHVNSVVMTEDGKPLVIEATDADKNHNA--------LLVFQIVEETAKLFFTVDSG 1826
Query: 180 SDDV------EYE------LTVEAHDLQSPSRYAREPAQVWLQ 210
+ V +YE +V D P A +PA+V ++
Sbjct: 1827 TGSVRTIAKLDYETFSSFYFSVNVRDCGRPQLTAEKPAKVLIR 1869
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y IT GN + F S + +G++ TS +DRE+ A++ L +T D GI
Sbjct: 1183 YRITAGNPQNFF------------SIDYNTGLITTTSRKLDREQQAEHFLEVTVMDGGGI 1230
Query: 90 NKAETH-VTVDVLDENDNSPVFSQKVYR 116
+ T V V V DENDN+P F + +YR
Sbjct: 1231 FRQSTVWVIVHVQDENDNTPEFKESIYR 1258
Score = 45.8 bits (107), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 46/92 (50%), Gaps = 13/92 (14%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
++LV + IT GN FAL P E + + +DREE QY L ITA+
Sbjct: 2959 NRLVSFHITGGNPKGVFALA-PIQGEWK----------VYVKRPLDREEQDQYLLNITAS 3007
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYR 116
D G+ V V V+D NDNSP+ +Q Y+
Sbjct: 3008 D--GLFVTRIGVEVTVMDANDNSPICNQAEYK 3037
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+V + +D E + Y++ + TD G N A T + + V D NDN+P+FS+ Y +V +
Sbjct: 1412 IVIARPLDAETQSLYNMTVQVTD--GTNTATTQIYIKVSDSNDNTPIFSEHTYEVLVSE 1468
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV-KGINKAETHV-TVDVLDENDNSPVFSQK 113
+SK+G + T GD+D E Y+ + A+D+ +G++ + T V TV + D NDN P F ++
Sbjct: 2871 DSKTG-WITTLGDLDHEICPSYTFNVVASDLGEGVSLSSTAVVTVAIADVNDNPPTFERE 2929
Query: 114 VYR 116
YR
Sbjct: 2930 YYR 2932
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQKV 114
+S SG+LL T+ +D E + +S ++ ATD ++ E VTV + D NDN P F+Q +
Sbjct: 2335 DSTSGLLL-TARLLDYELTSSFSFIVRATDNGSPSQNCEVTVTVFLSDVNDNPPSFNQPL 2393
Query: 115 YRFIVGDL 122
Y V +L
Sbjct: 2394 YEAFVSEL 2401
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 74/173 (42%), Gaps = 24/173 (13%)
Query: 28 VRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ YSI G+D F + + +R T S +L +RE Y+L + AT
Sbjct: 79 IEYSIESGDDEGLFQAEEFMLGDFCFLRIRTSGGSAAIL------NREVQDNYTLTVRAT 132
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
G+ +A V V ++D ND P+FS Y + + + L SNV+ V+A
Sbjct: 133 AGGGL-EASVTVNVQIMDMNDLRPLFSPTSYAINIPE-STPLGSNVAQ---------VTA 181
Query: 145 TDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD-DVEYELTVEAHD 193
TDAD + Y + P +G + LT P +D ++L V A D
Sbjct: 182 TDADIGSNGEFYYFFREEVEEFAVHPTSGVVSLTAKPNADKKSRFDLEVLAVD 234
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Query: 53 NSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS 111
NS E K+ LL DRE A Y L+ ATD G+ + +++ +LD NDN+P F+
Sbjct: 3083 NSGELKTAALL------DRERTAGYMLIAQATDGGGL-FCRSEISLTILDVNDNAPSFA 3134
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 68/166 (40%), Gaps = 21/166 (12%)
Query: 43 LKNPTTHEIRNSTES-----KSGVLLVTSGDIDREEVAQYSLVITAT-DVKGINKAETHV 96
L P + + N+ S SGV+ T DRE+ Y LV+ A+ + + A V
Sbjct: 2006 LNEPLKYTLLNAGTSFTIRPTSGVIQTTGVPFDREQQELYELVVEASREYDQLRVARVTV 2065
Query: 97 TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVA 153
V+V D NDN+P F Y V + SSI VSATD D V
Sbjct: 2066 RVEVEDVNDNAPEFVGLPYYAAVQ----------VDAQPGSSIFQVSATDLDKGINGAVY 2115
Query: 154 YKLAVPSNLVVIVPQTGELLL--TGDPPSDDVEYELTVEAHDLQSP 197
Y+L + TG+L L D +VEY L V A D P
Sbjct: 2116 YELKENHPHFEVNKLTGDLTLKKIFDADLSNVEYPLVVLARDAGYP 2161
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVG 120
L+ T+ +DRE +V+T + G +A V V + DENDN+P F YR
Sbjct: 2546 LITTAQKLDRENPINRDIVLTVMALDGGGRASFCTVRVILADENDNAPRFRAMEYRV--- 2602
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKL 156
S+ +NV + I + D +VAY L
Sbjct: 2603 ----SIKANVPMGSLVTQIQAQDPDSGDNGRVAYSL 2634
>gi|432099002|gb|ELK28484.1| Protocadherin Fat 1 [Myotis davidii]
Length = 3387
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 88/195 (45%), Gaps = 25/195 (12%)
Query: 23 HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVIT 82
H V Y I GN F + NP + I +T +D E + Y+L +
Sbjct: 692 HSQSSVVYEIRDGNIADAFTI-NPHSGSI------------ITQKALDFETLPIYTLTVQ 738
Query: 83 ATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
T++ G++ T V V + DENDN PVF Q Y +V + +SLNS V K + +
Sbjct: 739 GTNMAGLS-TNTTVLVHLQDENDNWPVFMQAEYTGLVSE-SASLNSVVLTDKNVPLV--I 794
Query: 143 SATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQ 195
ATDAD + + Y + PS I TG + +L+ D + + TV+ HD+
Sbjct: 795 RATDADKESNALLVYHIVEPSIHKYFAIDSSTGAIHTVLSLD-YEETSTFRFTVQVHDMG 853
Query: 196 SPSRYAREPAQVWLQ 210
+P +A A V +
Sbjct: 854 TPRLFAEYAANVTIH 868
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 90/199 (45%), Gaps = 32/199 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + YSI GN++ F++ +SK+G + + +
Sbjct: 2246 GTEILQVYAASRDIEANADITYSIIGGNEHGKFSI------------DSKTGAIFIIE-N 2292
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L + ATD ++ T V V+V D NDN+PVFSQ Y +V + + L
Sbjct: 2293 LDYESSHEYYLTVEATDGGTPSLSDVAT-VNVNVTDINDNTPVFSQDTYTAVVSE-DAIL 2350
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
V +V A DADG + Y + N I P GE+ +T +
Sbjct: 2351 EQPVL---------TVMADDADGPLNSHIHYSIIDGNQGNPFTIDPTRGEVKVTKLLDRE 2401
Query: 182 DVE-YELTVEAHDLQSPSR 199
+ Y LTV+A D SP R
Sbjct: 2402 TISGYTLTVQASDNGSPPR 2420
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN + F + +PT E++ + +DRE ++ Y+L + A+D
Sbjct: 2370 IHYSIIDGNQGNPFTI-DPTRGEVK------------VTKLLDRETISGYTLTVQASDNG 2416
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+PVF+Q Y I+
Sbjct: 2417 SPPRVNTTTVNIDVSDVNDNAPVFAQGNYSVII 2449
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 43/89 (48%), Gaps = 13/89 (14%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y IT GN F + K+G++ TS +DRE+ ++ L +T TD
Sbjct: 173 YRITSGNPQGFFTI------------HPKTGLITTTSRKLDREQQDEHILEVTVTDNGSP 220
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRF 117
++ V V +LDENDN P F QK Y+
Sbjct: 221 PRSTVARVIVKILDENDNKPQFLQKFYKI 249
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 102/249 (40%), Gaps = 47/249 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N I+N + + +DRE+ Y L ITATD
Sbjct: 1954 VAYYITGGDPLGQFAVEN-----IQNEWK------VYVKKPLDREKRDNYLLTITATD-- 2000
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS--IGSVSAT 145
G ++ V V VLD NDNSPV + +Y S+ F I V+AT
Sbjct: 2001 GTFSSKAIVEVKVLDANDNSPVCEKTLY------------SDTIPEDAFPGKLIMQVAAT 2048
Query: 146 DAD---GDKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHDLQSPS 198
DAD ++ Y L P + + P TGEL P D E Y L V+A D
Sbjct: 2049 DADIRSNAEITYTLFGPGAEKFNLNPDTGELKTLA--PLDREEQAVYNLLVKATD--GGG 2104
Query: 199 RYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGE 258
R+ + A V VL E + S PH I T R+ ++ D
Sbjct: 2105 RFCQ--AHV-------VLTLEDVNDNAPEFSADPHTITVFENTEPGTLLTRVQATDADAG 2155
Query: 259 MEGRIVFAL 267
+ +I ++L
Sbjct: 2156 LNRKIAYSL 2164
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 115/285 (40%), Gaps = 30/285 (10%)
Query: 10 VKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL------- 62
V GLP+L S P + ++ T K E S+ G L
Sbjct: 29 VPGLPVLTGSRKGGPEREENGEDDDDDNGVTLVPKR--CFEFCPSSGFPPGSLGTSVLAG 86
Query: 63 -LVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIV 119
+ T+ +DRE + Y L + ATD +G+ + V ++V D NDN+P S+ VY +
Sbjct: 87 VIETADRLDRESTSHYWLTVYATD-QGVVPLSSFIEVYIEVEDVNDNAPQTSEPVYSPEI 145
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAV--PSNLVVIVPQTGELLLTG- 176
+ S + +V H + F S DK+ Y++ P I P+TG + T
Sbjct: 146 ME-NSPKDISVVHIEAFDPDPS------SNDKLTYRITSGNPQGFFTIHPKTGLITTTSR 198
Query: 177 --DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHR 234
D D E+ L V D SP R A+V ++ Q LQ K P R
Sbjct: 199 KLDREQQD-EHILEVTVTDNGSPPRSTV--ARVIVKILDENDNKPQFLQKF-YKIRLPER 254
Query: 235 IEKRRVTRAVR-PTKRIDFSETDGEMEGRIVFALEKETEREKFKI 278
+ R A R P R+ ++ D I +++E+ E KF I
Sbjct: 255 EKPDRDRNAKRDPIYRVIAADKDEGPNAEISYSIEEGNEHGKFFI 299
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 41/88 (46%), Gaps = 13/88 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSIT G+ F + T GV+ V + +D E Y L + ATD
Sbjct: 1214 VLYSITDGDPFSQFTINFNT------------GVIHVIA-PLDFEAHPAYKLSVRATDSL 1260
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVY 115
AE V + V D NDN+PVF+Q+ Y
Sbjct: 1261 TGAHAEVFVDIVVEDINDNAPVFAQQAY 1288
>gi|351705181|gb|EHB08100.1| Protocadherin beta-7 [Heterocephalus glaber]
Length = 789
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 63/124 (50%), Gaps = 23/124 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT TD+ K + ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTESPLDRETRAEYNITITVTDLGTPRLKTQHNITVQVSDVNDNAPTFTQTSYTLWVPE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP---------SNLVVIVPQT 169
NS H IG++SATD D +V Y L +P ++LV I T
Sbjct: 463 ----NNSPALH------IGTISATDRDSGTNAQVTYSLLLPPPRDPHPGLASLVSINADT 512
Query: 170 GELL 173
G+L
Sbjct: 513 GQLF 516
>gi|332846223|ref|XP_003315210.1| PREDICTED: cadherin-3 [Pan troglodytes]
Length = 774
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 197 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 248
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+PVF + Y
Sbjct: 249 DGDGSTTTAVAVVEILDANDNAPVFDPQKY 278
>gi|301775675|ref|XP_002923254.1| PREDICTED: cadherin-3-like [Ailuropoda melanoleuca]
Length = 830
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE V +Y+L I ATD+
Sbjct: 253 VVAYSI------HSQEPKDP--HDLMFTVHRSTGTISVISSGLDRERVPEYTLTIQATDM 304
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+PVF + Y
Sbjct: 305 DGDGSTTTAVAIVEILDANDNAPVFDPQKY 334
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DRE++A+Y L A G + + ++++ V D+ND+ P F+Q
Sbjct: 160 TIEKETGWLLLNK-PLDREKIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQ 218
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
V+R V L+ L +S+ V+ATD D
Sbjct: 219 DVFRGSV--LEGVLPG--------TSVMQVTATDED 244
>gi|195022843|ref|XP_001985650.1| GH17186 [Drosophila grimshawi]
gi|193899132|gb|EDV97998.1| GH17186 [Drosophila grimshawi]
Length = 4534
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 83/179 (46%), Gaps = 23/179 (12%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P Q + YSI GN F + +P T GVL T +DRE A++ L ++
Sbjct: 1075 PSQKITYSIISGNLVGYFDI-DPNT-----------GVLKTTERKLDRENQAEHILEVSI 1122
Query: 84 TDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
+D I + T V V VLD NDNSPVF Q+VY+ V S+ N S ++ + ++
Sbjct: 1123 SDNGSPILTSTTRVVVSVLDINDNSPVFDQRVYKVQV---PSTTYINESIFQ----VHAI 1175
Query: 143 SATDADGDKVAY--KLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSR 199
D + ++ Y K N I +G + T P D E+E+ V+A D P R
Sbjct: 1176 DNDDGENGRITYSIKSGKKKNKFRIDSYSGHIFST-KPLEPDSEFEINVKAEDNGIPKR 1233
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 92/210 (43%), Gaps = 36/210 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V + I GN N +F + NP+T GV+++ S ++D E ++L I T++
Sbjct: 1598 VFFDIIAGNVNESFRI-NPST-----------GVIVINS-NVDYEINRMFNLTIKGTNMA 1644
Query: 88 GINKAETH--VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN--SNVSHWKKFSSIGSVS 143
A +H V V VLD NDN P F Q Y +G L S N S V + +V+
Sbjct: 1645 S---AFSHQNVIVHVLDVNDNVPKFLQTEY---IGTLSESANLGSYVQKVDEKKRHLTVN 1698
Query: 144 ATDAD---GDKVAYKLA--VPSNLVVIVPQTG--ELLLTGDPPSDDVEYELTVEAHDLQS 196
A DAD + YK+ + N+ I TG E+L + D Y V D+
Sbjct: 1699 AFDADVGLNGMLQYKILDDLAKNVFKIDSTTGAIEILRSLDYEKKS-NYSFFVTVSDMGK 1757
Query: 197 PSRYAREPAQVWLQFNS-----PVLQDEQL 221
PS ++ A V + + PV +D L
Sbjct: 1758 PSLHSTTKAHVVILVTNVNDCPPVFKDRDL 1787
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 74/179 (41%), Gaps = 17/179 (9%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA--TDVKGIN--- 90
N+N + + NPT T SG + T DRE Y L A T G N
Sbjct: 1909 NENVEYRILNPTEMFTIGIT---SGAIKTTGIIFDRETQDMYKLYFEAKSTVFSGDNIST 1965
Query: 91 -KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
+A T V + VLD NDN P+F Y +S++ + + ++ A+
Sbjct: 1966 RRALTSVYISVLDINDNCPMFVNMPYY-------ASVSVGFTKGTIILKVKAIDLDSAEN 2018
Query: 150 DKVAYKLAVPSN-LVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQV 207
+V Y+L + L I +TGEL + + +Y+LTV A D S P Q+
Sbjct: 2019 GEVRYELKKGNGELFKIDRKTGELSIKQTIEGHNRKYDLTVAACDGAVISCCTEVPVQI 2077
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 13/93 (13%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
SG +L+ S +D E V Y+L I+ TD G N T + + V+D NDN+P F++++Y
Sbjct: 1309 SGNVLL-SKYLDYETVTSYNLTISVTD--GSNIVYTWLFIQVVDTNDNAPQFTKEIYHV- 1364
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK 151
+++ N+ S I + ATD D DK
Sbjct: 1365 ------NISENIDEE---SVIMQLHATDRDEDK 1388
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 67/145 (46%), Gaps = 17/145 (11%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVK-GINKAETHVTVDVLDENDNSPVFSQKVYRF 117
SGVL V + +DRE++A+Y L D K I + + + + V D NDN+P+FS YR
Sbjct: 2967 SGVLKV-AKTLDREKIAKYKLYAHVQDGKEFIRECVSEIIITVNDINDNAPIFSLTNYRV 3025
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL-AVPSNLVVIVPQTGELL 173
+ + + L + V+ V ATD D K+ Y L S+ I TG +
Sbjct: 3026 SIQE-DAQLQTLVT---------KVHATDKDFGMNRKIKYSLTGTNSDYFGISKSTGIIK 3075
Query: 174 LTGDPPSDDVE-YELTVEAHDLQSP 197
L + + + Y TV+ D P
Sbjct: 3076 LEKNLDRETISLYNFTVKVEDFGKP 3100
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIV 119
+DRE ++ Y L + A D + + V + +LD NDN+P+FSQ Y ++
Sbjct: 3290 LDRETISDYVLEVQACDFGIPERCNSVQVNICILDANDNAPIFSQTNYSIVL 3341
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 18/92 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y I GN+ F + S +GVL V +G +D E+ Y L + A D
Sbjct: 3157 ILYYIISGNEQQKFNIN------------SSTGVLWV-NGTVDYEKSKFYFLTVQAIDGG 3203
Query: 88 G---INKAETHVTVDVLDENDNSPVFSQKVYR 116
N A ++T++ D NDN+P F+Q +YR
Sbjct: 3204 SPPFSNIAYVNITIE--DVNDNTPTFTQNIYR 3233
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 12/109 (11%)
Query: 41 FALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA-TDVKGINKAETHVTVD 99
++LK + E S++G L++ +DRE+ + LVI A T + A V +
Sbjct: 2639 YSLKLSISEESSIFAISENGELILMQT-LDREQNDSHYLVIVAETATLPVLFAYAEVYIH 2697
Query: 100 VLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
V DENDN P F +Y V + + +K +SI V+ATDAD
Sbjct: 2698 VTDENDNYPKFDNTIYSCEVAE----------NTEKVASILKVTATDAD 2736
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 57/267 (21%), Positives = 107/267 (40%), Gaps = 40/267 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV- 86
++YS+T N ++ F + SKS ++ ++DRE ++ Y+ + D
Sbjct: 3053 IKYSLTGTNSDY-FGI-------------SKSTGIIKLEKNLDRETISLYNFTVKVEDFG 3098
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
K I + ++ +++LD NDN P FS + Y KS + NV+ + I + S
Sbjct: 3099 KPILSSVANIVINILDINDNPPEFSLRQY-------KSHMYENVTRGSEVCKIHATSKDI 3151
Query: 147 ADGDKVAYKLAVPS--NLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYARE 203
++ Y + + I TG L + G + + Y LTV+A D SP
Sbjct: 3152 GVNAEILYYIISGNEQQKFNINSSTGVLWVNGTVDYEKSKFYFLTVQAIDGGSPPFSNIA 3211
Query: 204 PAQVWLQ---FNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEME 260
+ ++ N+P ++ +R R P + ++ D +
Sbjct: 3212 YVNITIEDVNDNTPTF------------TQNIYRTSVREDISVNLPIIDVKATDEDSNLN 3259
Query: 261 GRIVFALEKETEREKFKIRDENPWITV 287
G I + + K +F+I N I++
Sbjct: 3260 GIIKYNIVKGDSLSQFRINHSNGTISL 3286
>gi|109079024|ref|XP_001090927.1| PREDICTED: protocadherin beta-4 [Macaca mulatta]
Length = 795
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 81/180 (45%), Gaps = 32/180 (17%)
Query: 31 SITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN 90
+I DN F LK PT K+ LVT +DRE A+Y++ IT TD+
Sbjct: 380 TICSIPDNLPFVLK-PTL---------KNFYTLVTERPLDRETRAEYNITITVTDLGTPR 429
Query: 91 -KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
K + +TV V D NDN+P F+Q Y V + NS H IGSVSATD D
Sbjct: 430 LKTQQSITVQVSDVNDNAPTFTQTSYTLFVRE----NNSPALH------IGSVSATDRDS 479
Query: 150 D---KVAYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
+V Y L P ++LV I G L + ++ +E V A D SP+
Sbjct: 480 GTNAQVTYLLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQGFEFRVGAADRGSPA 539
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 14/116 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHK-HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
ENS+ GT P+L+A + L +Y+I+ + H RN +E K
Sbjct: 143 ENSQPGTL---FPLLIAEDLDVGSNGLQKYTISPNSHFHILT---------RNHSEGKKY 190
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVY 115
LV +DREE +++SL + A D ++ T V + ++D NDN+P F Y
Sbjct: 191 PDLVQDKPLDREEQSEFSLTLVALDGGSPPRSGTVMVRILIMDINDNAPEFVHTPY 246
>gi|260836293|ref|XP_002613140.1| hypothetical protein BRAFLDRAFT_73045 [Branchiostoma floridae]
gi|229298525|gb|EEN69149.1| hypothetical protein BRAFLDRAFT_73045 [Branchiostoma floridae]
Length = 1699
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 39/203 (19%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVF 110
+ S +G++ V +G++D E +SL + A D G A + +++ DENDNSP F
Sbjct: 512 AANSTTGLIYV-NGNLDYEAAQSFSLTVEARDRDGTSGYRSATARLAIELQDENDNSPQF 570
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD-------------ADGDKVAYKLA 157
SQ+ + F + + NSN S + +G+V ATD DG ++L
Sbjct: 571 SQEDFHFFIPE-----NSNDS-----APVGTVLATDRDSGQDGKVDHFIVDGGDGVFQLD 620
Query: 158 VPSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVW---LQFNSP 214
S + +V G+LL D + D Y LT+ A D SPS Y V + N+P
Sbjct: 621 FSSGQLTLV--RGDLL---DREAVD-WYTLTIRAQDRGSPSLYNFTNVNVTVTDVNDNAP 674
Query: 215 VLQDEQLLQMIDRKSEAPHRIEK 237
D+ L + R+ P R E+
Sbjct: 675 SFDDDTLRHTVTRE---PIRTEE 694
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 32/152 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YS +G+D T +P T +R +G +DRE ++ +V+ +TD K
Sbjct: 1022 IVYSRAEGDDTFTV---DPETGAVR------------VNGTLDREAADRHLVVVQSTD-K 1065
Query: 88 GINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G + VTV V D NDNSP+F+Q Y N +V + S +A
Sbjct: 1066 GDPPLSSTVTVLIHVGDVNDNSPIFTQGHY-----------NISVPENNDDKQVLSAAAA 1114
Query: 146 DAD---GDKVAYKLAVPSNLVVIVPQTGELLL 174
D+D +V Y L N + G+L L
Sbjct: 1115 DSDIGTNGRVRYYLMAADNFTIGGGICGDLFL 1146
>gi|426350318|ref|XP_004042725.1| PREDICTED: protocadherin beta-18-like isoform 2 [Gorilla gorilla
gorilla]
Length = 790
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 80/174 (45%), Gaps = 32/174 (18%)
Query: 37 DNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETH 95
DN F LK PT K+ LVT +DRE +Y++ IT TD+ K E +
Sbjct: 390 DNLPFVLK-PTF---------KNFYALVTEHPLDREVRNEYNITITVTDLGTPRLKTEHN 439
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KV 152
+TV V D NDN+P+F+Q Y V + NS H IGSVSATD D +V
Sbjct: 440 ITVLVSDVNDNAPIFTQTSYTLFVRE----NNSPALH------IGSVSATDRDSGTNAQV 489
Query: 153 AYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPS 198
Y L P ++LV I G L + + E+E V A D SP+
Sbjct: 490 TYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYESLQEFEFRVGAADHGSPA 543
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 35 GNDNHTFALKNPTTH-EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA- 92
G N+T + NP H ++R+ E + LV +DRE+ ++ SL +TA D ++
Sbjct: 168 GVQNYTIS-PNPHFHLKLRDGDEGRKYPELVLDQSLDREKESELSLTLTAVDGGSPPRSG 226
Query: 93 ETHVTVDVLDENDNSPVFSQKVY 115
T + V VLD NDN+P F + VY
Sbjct: 227 TTLINVVVLDINDNAPEFEKPVY 249
>gi|47207212|emb|CAF91491.1| unnamed protein product [Tetraodon nigroviridis]
Length = 767
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 86/170 (50%), Gaps = 23/170 (13%)
Query: 36 NDNHTFALKNPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA 92
ND + LK PT + +++N+ + + +V +DRE+ Q SLV+TA D +
Sbjct: 137 NDLQKYELK-PTDNFALKLQNNADGNQNIEMVLQKPLDREKQEQISLVLTAVDGGEPRMS 195
Query: 93 ETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD--- 148
T + + VLD NDN+PVF+Q Y+ V V + K + + +V+A+DAD
Sbjct: 196 GTMLILITVLDANDNAPVFTQSTYKSTV----------VENSAKGTVVATVTASDADDGA 245
Query: 149 GDKVAYKLAVP----SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
K+ Y + NL I + GE++L G+ ++ + +E+ + A D
Sbjct: 246 NSKITYSITNTLDDVRNLFKINMENGEVVLIGNLDFEESKRFEIDLRASD 295
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 18/100 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHV--TVDVLDENDNSPVFSQKVYR-FIV 119
LVT ++DRE ++Y++ ++ +D +G + V T+ + D NDN+PVF + Y+ +IV
Sbjct: 376 LVTDSELDRERESEYNITVSCSD-EGAPSLSSSVTLTLQISDVNDNAPVFERSSYQAYIV 434
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL 156
+ L SI +V A DAD +V+Y L
Sbjct: 435 ENNSPGL-----------SIFTVRARDADWNQNARVSYIL 463
>gi|397518430|ref|XP_003829390.1| PREDICTED: protocadherin beta-14 [Pan paniscus]
Length = 762
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 81/179 (45%), Gaps = 32/179 (17%)
Query: 32 ITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN- 90
I DN F LK PT K+ LV+ +DRE A+Y++ IT TD+
Sbjct: 382 ICSIQDNLPFFLK-PTF---------KNFFTLVSEKALDRESQAEYNITITVTDLGTPRL 431
Query: 91 KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD 150
K E ++TV V D NDN+P F+Q Y + + NS H IGSVSATD D
Sbjct: 432 KTEYNITVLVSDVNDNAPAFTQTSYTLFLRE----NNSPALH------IGSVSATDRDSG 481
Query: 151 ---KVAYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPS 198
+V Y L P ++LV I G L + + E+E V A D SP+
Sbjct: 482 TNAQVTYSLLPPQDPQLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA 540
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 45 NPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDV 100
+P +H +I +S++ K LV +D E+ A+ L +TA D K+ T V + V
Sbjct: 173 SPNSHFYIKIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKV 232
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
LD NDN+P F Q +Y V + + + W I ++SA D D K++Y
Sbjct: 233 LDINDNAPEFPQSLYEVQVPE-----DRPLGSW-----IATISAKDLDAGNYGKISYTF 281
>gi|390335673|ref|XP_003724198.1| PREDICTED: protocadherin Fat 4-like [Strongylocentrotus purpuratus]
Length = 1754
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 93/207 (44%), Gaps = 42/207 (20%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
ENS G + +P + A + QLV Y+IT G D+ TF + + +G
Sbjct: 412 FENSPVGQPITMIPPIRAINSDATGQLV-YTIT-GPDSQTFMIN-----------QLSAG 458
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+ + +G +DRE Y + TD G+ AE V ++VLD ND +P F+ VY F +
Sbjct: 459 IQV--NGPLDRETKDFYEFRVIVTDSMGM-TAEGTVHINVLDVNDFAPAFNDSVYNFTIP 515
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKV----------AYKLAVPSNLVVIVPQTG 170
+ NS ++ +G V+A D DGD V + + S + + P G
Sbjct: 516 E-----NSPGGYY-----VGGVTAYDLDGDNVNFFIQTGGEDKFDIGGTSETITVTP--G 563
Query: 171 ELLLTGDPPSDDVEYELTVEAHDLQSP 197
+L + P Y LTV DL++P
Sbjct: 564 AVLDREEKPF----YTLTVMVSDLRNP 586
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 69/148 (46%), Gaps = 25/148 (16%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIV 119
++ T+ +D E +++Y+L++TATD V V V D ND +P+F + VY
Sbjct: 140 MISTTTALDWETISEYTLIVTATDQSPTEPRTGTATVIVSVNDINDGAPMFVRDVYG--- 196
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELLLT 175
S+ VS+ S I S ATD D G + + SNL I PQTG L +
Sbjct: 197 ---PYSVVEEVSN----SYIDSFQATDTDQGQAGTVTYHVIGQYSNLFFIQPQTGVLTIR 249
Query: 176 GDPPSDDVEYE------LTVEAHDLQSP 197
P + YE +TV A D+ +P
Sbjct: 250 ---PDRALNYETITQFNITVVAMDMGNP 274
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 16/105 (15%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
I V ++ + +RY I GN N+TF L + G++ V +D E
Sbjct: 1076 ITVVANDPDQNSSLRYKILGGNLNNTFVLVD-------------GGLIPVKP--LDFETF 1120
Query: 75 AQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
Y+L + TD G N+ T+V V V D ND++P F +Y V
Sbjct: 1121 TNYNLTVVVTDDSG-NRDTTYVAVTVTDANDHNPTFVPDLYSLSV 1164
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 99/239 (41%), Gaps = 46/239 (19%)
Query: 69 IDREEVAQYSLVITATDVK------GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+DRE ++ I+A D+ G ++ VT+ + D NDN P F FI+ L
Sbjct: 685 VDREVTEKFVFSISARDLNSQNPIFGTSQENAQVTILITDINDNHPAFQPPGTTFILRQL 744
Query: 123 KSSLNSNVSHWKKFSSI-GSVSATDAD---GDKVAYKLAVPSNLVVIVPQ-TGELLLTGD 177
S + S I G++ A D D KV Y + PS + V + Q TG+L L
Sbjct: 745 PESFGAG-------SPIPGNLLALDPDLGLNGKVMYIIQDPSGVPVTIDQNTGQLTLL-- 795
Query: 178 PPSDDVEYE----LTVEAHDLQSPSRYAREPAQVWLQF-----NSPVLQDEQLLQMIDRK 228
+ D E + LTV A D +PS P V+L+ N+PV +
Sbjct: 796 -VTVDREQQPWVNLTVLAVDKGTPSLNTSIP--VYLEIIDNNDNNPVFG---------AQ 843
Query: 229 SEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
S P IE + V ++ ++ D G++ ++L KF I + IT+
Sbjct: 844 SHTPTIIESAPIGAFVF---NVNATDADSGGSGQVTYSLIG--GDGKFTINQDTGVITL 897
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 47 TTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDN 106
T + +RN T + + ++ T+ +DRE+ ++Y L I A + G V++ V D NDN
Sbjct: 1197 TGNGLRNFTINSTTGIINTATILDREKTSEYVLTIGAENPVGGTTGTATVSIIVRDVNDN 1256
Query: 107 SPVFSQKVY 115
+P F + Y
Sbjct: 1257 TPTFEENPY 1265
>gi|195159447|ref|XP_002020590.1| GL15355 [Drosophila persimilis]
gi|194117540|gb|EDW39583.1| GL15355 [Drosophila persimilis]
Length = 1691
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 119/277 (42%), Gaps = 62/277 (22%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG--INKAE 93
N ++L N T + + +SKSG L+ T G +DRE + YS ++ ATD + A
Sbjct: 111 NARLVYSLANETQWQF--AIDSKSG-LITTVGKLDRELQSSYSFMVLATDGGRYEVRSAR 167
Query: 94 THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GD 150
V ++VLD NDN PVF + Y +G + + + + K V A DAD
Sbjct: 168 VAVQINVLDVNDNRPVFERYPY---IGQVPALIQPGQTLLK-------VQAHDADQGLNG 217
Query: 151 KVAYKLAVPSNLVVIVPQTGELLLT--------------------GDPPSDDVEY-ELTV 189
++ Y L + I P TG L T G+PP V EL V
Sbjct: 218 ELLYSLKGDAGKFRINPNTGALSATQSLASESGRLLQLEVVARDKGNPPQSSVGLIELLV 277
Query: 190 EAHDLQSPS-RYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTK 248
+P R+ E +V L+ NSP +LLQ++ +S+ RR +
Sbjct: 278 GEAPQGAPVLRFQNETYRVKLRENSPA--GLRLLQVVAVRSDG------RR--------Q 321
Query: 249 RIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWI 285
++ FS G EG +F+L+ + +IR NP +
Sbjct: 322 KVQFSFGAGNDEG--IFSLDPSSG----EIRVANPSL 352
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 29/139 (20%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + YSIT GN + F S +++SG L + +DRE+ A+Y+L + A
Sbjct: 5 PNADIIYSITGGNLGNKF------------SIDARSGEL--SCRPLDREQHARYTLQVQA 50
Query: 84 TDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D + H + VL D+NDN+P F DL + S +S+
Sbjct: 51 SDRGQPTSRQGHCNITVLVEDQNDNAPRF----------DLPKYVASVAEDAPLGASVVR 100
Query: 142 VSATDAD---GDKVAYKLA 157
+ ATDAD ++ Y LA
Sbjct: 101 IKATDADLGVNARLVYSLA 119
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 64/122 (52%), Gaps = 13/122 (10%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
+S SG ++ ++ D E+ +Y + + A+D+ G A V V+V ++ +P FS++ Y
Sbjct: 1026 DSHSG-MVSSAAVFDFEQRQRYDMELRASDMGG-KGARVAVRVEVDSRDEFAPQFSERTY 1083
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGEL 172
RF+ L + + + F +G V+ATDAD +V Y+L+ P + +G +
Sbjct: 1084 RFV-------LPAAAALPQGF-VVGQVTATDADSGPDGRVVYQLSAPHTHFKVNRSSGAV 1135
Query: 173 LL 174
L+
Sbjct: 1136 LI 1137
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 19/107 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK---VYRFI- 118
LV +D E +Y L + A+D ++A T +TV V DENDN+PVF + Y I
Sbjct: 596 LVLKRRLDYELQQEYQLEVIASDAA--HEARTTLTVRVNDENDNAPVFLAQQPPAYFAIL 653
Query: 119 --VGDLKSSLNSNVSHWKKFSSIGSVSATDADGD----KVAYKLAVP 159
V ++ SL+ ++ + SV+ATDAD + K+ Y + P
Sbjct: 654 PAVAEVADSLSMDL-------ELLSVNATDADAEGSNSKIRYSIDPP 693
>gi|126291006|ref|XP_001377838.1| PREDICTED: protocadherin gamma-B1-like [Monodelphis domestica]
Length = 817
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 77/161 (47%), Gaps = 26/161 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIVG 120
LVT G +DREE+ +Y++ I ATD KG T +T+ + D NDN PVF Q Y V
Sbjct: 398 LVTDGALDREEIPEYNITIIATD-KGNPPLTTSKILTLHITDVNDNPPVFLQSSYVVYVP 456
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL--------VVIVPQT 169
+ S +SI VSATD D +V+Y + V S+L V + +
Sbjct: 457 ENNPS----------GTSIACVSATDLDLEENGRVSYSI-VSSDLEPLQLFSYVSVNSHS 505
Query: 170 GELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL 209
G + + V +ELT++A D PS A QV++
Sbjct: 506 GHIFAQSSFDYEQVHTFELTIQARDAGFPSLNANVTMQVFI 546
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 71/140 (50%), Gaps = 20/140 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LV +DRE+ + YSL++TA D GI + ++V D NDN PVFSQ++YR I
Sbjct: 189 LVLEKPLDREKQSSYSLILTAVD-SGIPVRSGTVEIRINVTDANDNWPVFSQEIYRVI-- 245
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVP---SNLVVIVPQTGELLL 174
L+ SL SS+ V+ATD D ++ Y L+ +L + ++GEL
Sbjct: 246 -LQESLPPG-------SSVLQVTATDQDEGNNAEITYSLSTVETLKHLFKLDSRSGELTT 297
Query: 175 TGDPPSDDVE-YELTVEAHD 193
G + E Y L VEA D
Sbjct: 298 KGILDFEKGEGYTLGVEAKD 317
>gi|109506490|ref|XP_574130.2| PREDICTED: protocadherin beta-16 [Rattus norvegicus]
gi|109507201|ref|XP_001065253.1| PREDICTED: protocadherin beta-16 [Rattus norvegicus]
gi|149017304|gb|EDL76355.1| rCG49511 [Rattus norvegicus]
Length = 799
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 58/112 (51%), Gaps = 16/112 (14%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQ 112
+ K+ LVT G +DREE Q ++ IT TD+ GI + T +TV V D NDN+P F+Q
Sbjct: 395 SSGKNFYTLVTKGALDREEREQLNITITVTDL-GIPRLTTQHTITVQVADINDNAPSFTQ 453
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSN 161
Y V + NS H IG++SATD+D + Y L P +
Sbjct: 454 TSYTMFVRE----NNSPALH------IGTISATDSDSGSNAHITYSLLPPQD 495
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 77/151 (50%), Gaps = 19/151 (12%)
Query: 52 RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVF 110
RN ++ + LV ++DREE + L +TA D ++ T V ++V+D NDN+P F
Sbjct: 183 RNRSDGRKYPELVLEKELDREEEPELRLTLTALDGGSPPRSGTTQVLIEVVDTNDNAPEF 242
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GD--KVAYKLAVPSNLVV--- 164
Q Y+ +++ NS S + +VSA D D GD KV Y L+ PS +
Sbjct: 243 QQPTYQ-----VQTPENSPTG-----SLVLTVSANDLDSGDYGKVLYALSQPSEDISKTF 292
Query: 165 -IVPQTGELLLTGDPPSDDV-EYELTVEAHD 193
+ P TGE+ L + + + YE+ ++A D
Sbjct: 293 EVNPVTGEIRLRKEVNFETIPSYEVVIKATD 323
>gi|119582380|gb|EAW61976.1| protocadherin beta 8 [Homo sapiens]
Length = 801
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 24/149 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVG 120
L+T +DRE A+Y++ IT TD+ G + TH+ + VL D NDN+P F+Q Y V
Sbjct: 404 LLTETPLDRESRAEYNVTITVTDL-GTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVR 462
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 463 E----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINTDNG 512
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 HLFALRSLDYEALQAFEFRVGASDRGSPA 541
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE A+ L +TA D ++ T V ++V+D NDN+P F Q YR
Sbjct: 195 LVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFEQPFYR----- 249
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQ----TGELLL 174
++ S +S +S + VSATD D +++Y L S+ + + TGE+ L
Sbjct: 250 VQISEDSPISFL-----VVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRL 304
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+ + YE+ +EA D
Sbjct: 305 KKQLDFEKFQSYEVNIEARD 324
>gi|157118460|ref|XP_001659117.1| cadherin, putative [Aedes aegypti]
gi|108875699|gb|EAT39924.1| AAEL008318-PA, partial [Aedes aegypti]
Length = 1326
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 91/206 (44%), Gaps = 47/206 (22%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD--IDREEVAQYSLVITATD 85
+RY+ G N + L +PT SGV+ V + + DRE + +Y L + A D
Sbjct: 149 IRYTQILGPQNTSLNL-DPT-----------SGVITVATSNHGFDRETMPEYHLYVEARD 196
Query: 86 VKGI-NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+GI N+A+ + + ++D ND +P F + +Y FI+ S+ + F+ + A
Sbjct: 197 DEGIGNRAQVLLVIRLIDVNDETPTFEKSLYEFILS----------SNLRNFTVPAIIKA 246
Query: 145 TDADGD----KVAYKLAVPS--NLVVIVPQTGELLL----------------TGDPPSDD 182
D D + +V Y+L + N + P TGEL L T S+
Sbjct: 247 IDNDAEPPNNEVRYELIYGNYENKFELHPITGELKLTSALVRRSKPTRQRRQTSQQSSES 306
Query: 183 VEYELTVEAHDLQSPSRYAREPAQVW 208
+ LT A DL P R++ +V+
Sbjct: 307 DVFVLTARAFDLGVPVRFSTTTIRVY 332
>gi|397518008|ref|XP_003829192.1| PREDICTED: protocadherin beta-13-like [Pan paniscus]
Length = 798
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 73/148 (49%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+T +DRE A+Y++ IT TD+ + K + ++TV + D NDN+P F+Q Y V +
Sbjct: 403 LLTERPLDRESRAEYNITITVTDLGTPMLKTQLNMTVLIADVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I + G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLTSLVSINAENGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 LFALRSLDYEALQGFEFRVGASDHGSPA 540
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE A+ L +TA D ++ T V ++VLD NDN+P F Q YR
Sbjct: 195 LVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYR----- 249
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLV----VIVPQTGELLL 174
++ S +S V + VSATD D +++Y L S + I P TGE+ L
Sbjct: 250 VQISEDSPVGFL-----VVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIEL 304
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+ ++ YE+ +EA D
Sbjct: 305 KKQLDFEKLQSYEVNIEARD 324
>gi|426229938|ref|XP_004009040.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Ovis aries]
Length = 4343
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 25/204 (12%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G PIL+ S+ V Y + +GN N F++ S SG L+ T +D
Sbjct: 1672 GSPILLISATSFSE--VTYELREGNKNGVFSMN------------SYSG-LISTQKKLDH 1716
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E+++ Y L I +++ G + V V ++DENDN+PVFS+ + VG + + N
Sbjct: 1717 EKISSYQLKIRGSNMAGA-FTDIMVLVYIIDENDNAPVFSKLTF---VGQISEAAPLNSM 1772
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EY 185
+ ++ + A+D+D + + YK+ P L + I P G L + + + +
Sbjct: 1773 IMDENNNPLVIRASDSDKEANSLLVYKILEPEALKFLKIDPSMGTLTTVLEMDYESMPSF 1832
Query: 186 ELTVEAHDLQSPSRYAREPAQVWL 209
+ HD SP +A AQV +
Sbjct: 1833 RFNIYVHDQGSPILFAPRAAQVII 1856
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 82/176 (46%), Gaps = 28/176 (15%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS+ G V L L A + Q+ Y IT+G+ F + E R
Sbjct: 2914 VENSEPGEPVATLKTLDADISEQNRQVTCY-ITEGDPLGQFGISQ-VGDEWR-------- 2963
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+ + +DRE A+Y L ITA+D G +A V + VLD NDNSP SQ +Y G
Sbjct: 2964 --IFSRKTLDREHTAKYLLRITASD--GKFQASVPVEIFVLDINDNSPQCSQLLY---AG 3016
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-SNLVVIVPQTGEL 172
++ + H+ I VSATD D D ++ Y L P ++ + P TGEL
Sbjct: 3017 EVSEDVPPG--HF-----ILKVSATDLDSDTNAQITYSLHGPGADEFKLDPHTGEL 3065
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 70/162 (43%), Gaps = 28/162 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLV 80
P VRY I G+ + F + +R T+S + LL +RE Y+L+
Sbjct: 61 PQWAVRYRIISGDVANVFKTEEYVVGNFCFLRIRTKSSNTALL------NREVRDSYTLI 114
Query: 81 ITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD---LKSSLNSNVSHWKKFS 137
I AT+ +A V V +LD+ND P+FS YR + + LK S
Sbjct: 115 IQATEKTLELEALARVVVRILDQNDLKPLFSPPSYRVTISEDMPLK-------------S 161
Query: 138 SIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTG 176
I VSATDAD + A Y S + I P +G + L G
Sbjct: 162 PICKVSATDADLGQNAEFYYAFNTRSEMFAIHPASGVVTLAG 203
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 30/188 (15%)
Query: 26 QLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
++V +T N + LK P++ +++G L+ T+ +D + AQY L I +
Sbjct: 376 RVVMVKVTPAFPNLKYVLK-PSSESAAFKLNARTG-LITTTKLMDFHDQAQYQLHIRTS- 432
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ A T V +D++D N+++PVF++ Y + + N+ +S+ +VSAT
Sbjct: 433 ---LGLASTTVVIDIMDCNNHAPVFNRSSY-------DGTFDENI---PPGTSVLTVSAT 479
Query: 146 DADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT-------VEAHDLQ 195
D D + + Y +A P+ + + ++ T P ++YEL V+A D
Sbjct: 480 DQDHGENGYITYSIARPNAVPFSIDPYLGIISTSKP----MDYELMNRIYTFRVQASDWG 535
Query: 196 SPSRYARE 203
SP R +E
Sbjct: 536 SPFRQEKE 543
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 28/169 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN+ F + E ++G LL + +D E + Y L +T D+
Sbjct: 748 YVIADGNEEGCFDI------------ELETG-LLTVAAPLDYEATSFYVLNVTVYDLGTP 794
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K+ +TV+V D NDN+P F Y+ + + + + + V K A D D
Sbjct: 795 QKSSWKLLTVNVEDWNDNAPRFPPGGYQVTISE-DTEVGTTVVELK---------AKDVD 844
Query: 149 GD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSD-DVEYELTVEAHD 193
+ +V Y L P+ + P TGE+++TG + + +Y L VEA D
Sbjct: 845 SEDNGRVRYALLSPTEKFSLHPLTGEIVVTGHLDRESEPQYILKVEARD 893
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
+T+ K+GVL VT G +D E ++ + ATD + +E V V V D NDN P FSQ
Sbjct: 2213 TTDFKTGVLTVT-GPLDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQL 2271
Query: 114 VY 115
VY
Sbjct: 2272 VY 2273
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 31/123 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ ++IT GN F L +P T LL T+ +DRE ++ L +T D
Sbjct: 1168 LTFNITSGNHMGFFVL-HPLTG------------LLATARQLDRENKDEHILEVTVLDNG 1214
Query: 88 GIN-KAETHVTVDVLDENDNSPVFSQK-----------------VYRFIVGDLKSSLNSN 129
+ ++ + V V ++D NDN PVFS K VYR + DL LN
Sbjct: 1215 EPSLRSTSRVVVRIVDVNDNPPVFSHKLFNVRLPERLIPGTSGPVYRLVASDLDEGLNGR 1274
Query: 130 VSH 132
V++
Sbjct: 1275 VTY 1277
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 124/293 (42%), Gaps = 58/293 (19%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQL---VRYSITQGNDNHTFALKNPTTHEIRNSTESK 58
ENS SGT V +V ++H L ++Y + G F++ T
Sbjct: 1039 ENSPSGTSV-----MVVAAHDDDTGLDGELQYFLRAGTSLAAFSINQDTG---------- 1083
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRF 117
++ T +DRE + Y L + A D I + T V ++VLD NDN P S+ V+
Sbjct: 1084 ---MIQTLAPLDREFASCYWLTVLAVDRGSIPLSSVTEVYIEVLDVNDNPPQMSRPVFYP 1140
Query: 118 IVGDLKSSLNSNVSHWKKF----SSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELL 173
V + + L+++V + SS G ++ G+ + + V+ P TG LL
Sbjct: 1141 SVRE-DAPLHTSVLQLDAWDPDSSSKGKLTFNITSGNHMGF--------FVLHPLTG-LL 1190
Query: 174 LTG---DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQF-----NSPVLQDEQLLQMI 225
T D + D E+ L V D PS R ++V ++ N PV +L +
Sbjct: 1191 ATARQLDRENKD-EHILEVTVLDNGEPS--LRSTSRVVVRIVDVNDNPPVFS-HKLFNV- 1245
Query: 226 DRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKI 278
R+ +R + P R+ S+ D + GR+ +++E E++ F I
Sbjct: 1246 --------RLPERLIPGTSGPVYRLVASDLDEGLNGRVTYSIE-ESDEAGFSI 1289
>gi|395736277|ref|XP_003780466.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-15 [Pongo
abelii]
Length = 787
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIVG 120
LVT G +DRE A+Y++ IT TD+ G + ET +TV V D NDN+P F+Q Y V
Sbjct: 403 LVTEGALDRETRAEYNITITITDL-GAPRLETEHSITVLVSDVNDNAPAFTQTSYTLFVR 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ NS H IGSVSATD D
Sbjct: 462 E----NNSPALH------IGSVSATDRD 479
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVY 115
LV ++DREE A+ L +TA D ++ T + + VLD NDN+P F+Q +Y
Sbjct: 194 LVLDTELDREEQAELRLTLTAVDGGSPPRSGTVQILILVLDANDNAPEFAQALY 247
>gi|426382655|ref|XP_004057919.1| PREDICTED: cadherin-3 isoform 3 [Gorilla gorilla gorilla]
Length = 774
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 197 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 248
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+PVF + Y
Sbjct: 249 DGDGSTTTAVAVVEILDANDNAPVFDPQKY 278
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DREE+A+Y L A G + + ++++ V D+ND+ P F+Q
Sbjct: 104 AVEKETGWLLLNKP-LDREEIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQ 162
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAV 158
+R V L+ L +S+ V+ATD D Y V
Sbjct: 163 DTFRGSV--LEGVLPG--------TSVMQVTATDEDDAIYTYNGVV 198
>gi|426350307|ref|XP_004042720.1| PREDICTED: protocadherin beta-3 isoform 1 [Gorilla gorilla gorilla]
Length = 798
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV+ G +DRE ++Y++ IT TD+ K + ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVSEGALDRETRSEYNITITITDLGTPRLKTKYNITVLVSDVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P S+LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDLHLPLSSLVSINADNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 LFALRSLDYEALQAFEFRVGATDRGSPA 540
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + SL +TA D ++ T + + VLD NDN+P F+Q +Y V +
Sbjct: 194 LVLDKALDREEQPELSLTLTALDGGAPRRSGTAQINIQVLDINDNAPEFAQPLYEVAVLE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
N+ V+ S I +VSA+D D
Sbjct: 254 -----NTPVN-----SVIVTVSASDLD 270
>gi|333440480|ref|NP_061993.2| protocadherin beta-8 precursor [Homo sapiens]
gi|145559514|sp|Q9UN66.3|PCDB8_HUMAN RecName: Full=Protocadherin beta-8; Short=PCDH-beta-8; AltName:
Full=Protocadherin-3I; Flags: Precursor
Length = 801
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 24/149 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVG 120
L+T +DRE A+Y++ IT TD+ G + TH+ + VL D NDN+P F+Q Y V
Sbjct: 404 LLTETPLDRESRAEYNVTITVTDL-GTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVR 462
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 463 E----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINTDNG 512
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 HLFALRSLDYEALQAFEFRVGASDRGSPA 541
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE A+ L +TA D ++ T V ++V+D NDN+P F Q YR
Sbjct: 195 LVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFEQPFYR----- 249
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQ----TGELLL 174
++ S +S +S + VSATD D +++Y L S+ + + TGE+ L
Sbjct: 250 VQISEDSPISFL-----VVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRL 304
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+ + YE+ +EA D
Sbjct: 305 KKQLDFEKFQSYEVNIEARD 324
>gi|292616334|ref|XP_695998.4| PREDICTED: cadherin-1-like [Danio rerio]
Length = 809
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 75/153 (49%), Gaps = 30/153 (19%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSIT-QGNDNHTFALKNPTTHEIRNSTESKS 59
+EN KS K L L A+ P + +RYSIT +G D + T S S
Sbjct: 96 LENDKSALP-KILFKLKANLDGVPDEDIRYSITGEGADQPPVGIFTVT---------SMS 145
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
G++ VT +DRE+ A Y L+ A VKGI + T++T+ V D+NDN PVF + +
Sbjct: 146 GIVKVTQ-QLDREKKALYLLMAHANSVKGIKEKPTNLTIIVADQNDNRPVFVENPFN--- 201
Query: 120 GDLKSSLNSNVSHWKKFSSIG----SVSATDAD 148
H + ++IG +V+ATDAD
Sbjct: 202 -----------GHVSESATIGHEFMAVTATDAD 223
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 18/113 (15%)
Query: 17 VASSHKHPHQLVRYSITQGNDNHTF-------------ALKNPTTHEIRNSTESKSGVLL 63
V+ S H+ + + T +D TF L NP EI T G +
Sbjct: 204 VSESATIGHEFMAVTATDADDPDTFNADVRYKIVSQDPLLPNPNMFEINLVT----GGIY 259
Query: 64 VTSGDIDREEVAQYSLVITATDVKGINKAETHVTV-DVLDENDNSPVFSQKVY 115
V +DRE++++Y+LVI A D++G T V V D NDN+P F + +
Sbjct: 260 VKFLGLDREQLSRYTLVIQAADLQGDGMMTTGTAVITVTDSNDNAPQFDETTH 312
>gi|149699727|ref|XP_001497010.1| PREDICTED: cadherin-3 [Equus caballus]
Length = 824
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE V +Y+L I ATD+
Sbjct: 247 VVAYSI------HSQEPKDP--HDLMFTVHRSTGTISVISSGLDRERVPEYTLTIQATDM 298
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+PVF + Y
Sbjct: 299 DGDGSTTTAVAVVEILDANDNAPVFHPQKY 328
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
S E ++G LL+ +DRE++A+Y L A G + E ++++ V D+ND+ P F+Q
Sbjct: 154 SIEKETGWLLLNK-PLDREKIAKYELFGHAVSENGASVEEPMNISIIVTDQNDHKPKFTQ 212
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
V+R V L+ L +S+ V+ATD D
Sbjct: 213 DVFRGSV--LEGVLPG--------TSVMQVTATDED 238
>gi|162138888|ref|NP_001104599.1| protocadherin alpha 12 precursor [Gallus gallus]
gi|45790058|gb|AAS77414.1| cadherin-related neuronal receptor 12 [Gallus gallus]
Length = 999
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 55/274 (20%)
Query: 36 NDNHTFALKNPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA 92
N +++L +P+ H +I++ + K + LV + +DRE ++++ LV+TA+D G A
Sbjct: 163 NAQLSYSL-SPSEHFALDIKSKDKKKVSIALVLTHPLDRESLSEHRLVLTASD--GGRPA 219
Query: 93 ET---HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD- 148
T + + VLD NDN+P F+Q VY+ + L+ ++ V ++ATD D
Sbjct: 220 LTGTVQLVISVLDANDNAPQFNQSVYKVQL--LEDAIPGTV--------FLHLTATDKDE 269
Query: 149 ---GD-KVAYKLAVPSN---LVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRY 200
G+ A+ VP L +I +GE+ G+ +DV+ Y+L +EA D +P
Sbjct: 270 GINGEIYYAFSETVPEKMKELFIIDRTSGEMRTAGELDFEDVQSYDLEIEAGDKGTPPLS 329
Query: 201 AR------------EPAQVWL-QFNSPVLQDE------QLLQMIDRKSEAPHRIEKRRVT 241
+VW+ + PV +D LL + DR S P+ RV
Sbjct: 330 GHCNVELEVLDVNDNAPEVWVTSLSVPVPEDAALGTVVALLSVSDRDS-GPN----GRVR 384
Query: 242 RAVRPTKRIDFSETDGEMEGRIVFALEKETEREK 275
AVRP T G L + +RE+
Sbjct: 385 CAVRPPSPFGLVAT---FAGSYSLVLREALDRER 415
>gi|426350309|ref|XP_004042721.1| PREDICTED: protocadherin beta-3 isoform 2 [Gorilla gorilla gorilla]
Length = 796
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV+ G +DRE ++Y++ IT TD+ K + ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVSEGALDRETRSEYNITITITDLGTPRLKTKYNITVLVSDVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P S+LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDLHLPLSSLVSINADNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 LFALRSLDYEALQAFEFRVGATDRGSPA 540
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + SL +TA D ++ T + + VLD NDN+P F+Q +Y V +
Sbjct: 194 LVLDKALDREEQPELSLTLTALDGGAPRRSGTAQINIQVLDINDNAPEFAQPLYEVAVLE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
N+ V+ S I +VSA+D D
Sbjct: 254 -----NTPVN-----SVIVTVSASDLD 270
>gi|391334511|ref|XP_003741647.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog
[Metaseiulus occidentalis]
Length = 4558
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 86/199 (43%), Gaps = 35/199 (17%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS + T + + + A + + V+YSI H F L +P T E+R
Sbjct: 2539 ENSSASTYI--ITVSAADQDRGQYGRVKYSIQSEEMTHYFTL-DPDTGELR--------- 2586
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
T +DRE+ + Y + I A D G + V V V DENDN P F YR
Sbjct: 2587 ---TKRTLDREKRSLYKIAIVAED-GGARIGHSVVRVTVTDENDNPPQFLLPEYR----- 2637
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLV---VIVPQTGELLL 174
NV ++ +I V+ATD D G K +++ P N+ IV GE+ L
Sbjct: 2638 ------CNVKNFTTGQAILKVTATDQDLQPRGLKYSFRDGDPQNITDSFGIVEDNGEIFL 2691
Query: 175 TGDPPSDDVEYELTVEAHD 193
P ++ Y+ V+A D
Sbjct: 2692 K-KPLTEGARYQFFVKASD 2709
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 128/311 (41%), Gaps = 56/311 (18%)
Query: 3 NSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL 62
N G LP+ + + + Y I+ G+D+ F + K ++
Sbjct: 746 NESVPVGTTLLPLRAKDADHGYNGRIVYVISSGDDDSCFKMD-----------LYKGNLM 794
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE +Y L ITA D+ K A V V VLD NDN P+F + +Y F + +
Sbjct: 795 LVEP--LDRERTPKYVLTITAYDLGEPKKSASISVVVYVLDVNDNPPIFEKSLYTFKISE 852
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD-GD--KVAYKLAVPSNLVVIVPQTGELLLTGDP 178
S+N K + ATDAD GD K+ YKL+ ++ ++ + G L++ +
Sbjct: 853 ---SVNKGAVMVK-------LRATDADEGDNAKIRYKLSTETDDFIVDEKAGILIVHRNL 902
Query: 179 PSD-DVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEK 237
+ EY L V+A D + + L + + +Q+ D E P K
Sbjct: 903 DRERQSEYNLMVKATD-----------SSIELPLTGTTMVN---IQVQDVNDERPRFTLK 948
Query: 238 RRVTRAVRPTKR----IDFSETDGEME--GRIVFALEKETEREKFKIRDENPWITVDENG 291
+ R + + + D +++ G++ + L + R F+I E G
Sbjct: 949 NYIARVREDLPKGSVIMTMAAQDPDLDDAGKVSYQLMSKELRNLFEID--------SETG 1000
Query: 292 DVRVKKRWDFE 302
VR+ DFE
Sbjct: 1001 IVRLIGELDFE 1011
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 39/187 (20%)
Query: 14 PILVASSHKHPHQ-----LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
PI+ S+H PH+ ++ Y I G+++ F + SK+G + T+
Sbjct: 368 PIVRVSAHL-PHEEKHNDVIVYRIETGDEDGVFDIN------------SKTG-QISTNKW 413
Query: 69 IDREEVAQYSLVITATDVK--------GINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+DRE+ YSL ++AT+ K G A T V ++VLD NDN+P F+Q + R +V
Sbjct: 414 LDREQRRYYSLTVSATNTKSRSTRHRTGAAVATTIVNINVLDCNDNAPRFNQSI-RSVV- 471
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNL-VVIVPQTGELLLTGDPP 179
+++ NV K ++ + A D + V + LA + + I P TG + T
Sbjct: 472 ----TIDENVPIGTKVVTVSATDADDEENGYVTFALANTNKIPFKINPFTGVVSTT---- 523
Query: 180 SDDVEYE 186
D+++YE
Sbjct: 524 -DNIDYE 529
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 15/148 (10%)
Query: 59 SGVLLVTSGDI-DREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
SG L V G + DRE+ A Y LV+ A + A T + V + D NDN+P F Y
Sbjct: 2049 SGALTVRPGTVFDREQQADYRLVVNAVALATERVASTLIDVTIEDVNDNAPTFVDTPYHC 2108
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATD----ADGDKVAYKLAVPSNLVVIVPQTGELL 173
+V + SN K + V A D A+G + Y + + I ++G +
Sbjct: 2109 VV-----PIESN-----KGEQVQKVRAEDPDDGANGRVLYYLRDLHKGVFDIDSKSGNIT 2158
Query: 174 LTGDPPSDDVEYELTVEAHDLQSPSRYA 201
L PS +Y +TV A D +P Y+
Sbjct: 2159 LRKRLPSHMTQYTITVVAKDEGNPPMYS 2186
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 77/183 (42%), Gaps = 32/183 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHE-----IRNSTESKSGVLLVTSGDIDREEVAQYS 78
P VRY I G+ + F + + +R TE+ S ++RE Y
Sbjct: 45 PEVNVRYKIVSGDKDKHFKAEAKQVGDFWYLLLRIRTEN--------SAVLNREYQEHYK 96
Query: 79 LVITAT---DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK 135
L + T + + V V +LD+ND SP+F K Y V ++
Sbjct: 97 LKVRGTLQQKSRKLYDVHCDVLVTILDKNDISPLFYPKTYNVTVSEMT----------PL 146
Query: 136 FSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVE 190
F +I V+A D D ++ Y LA PSN+ I P G + +T D +V + LTVE
Sbjct: 147 FQNILKVNADDPDEGINGEIYYNLAEPSNVFAIHPTLGSISVTRPLDYRKSNV-FNLTVE 205
Query: 191 AHD 193
A D
Sbjct: 206 ARD 208
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 21/144 (14%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G P++V + + Y I+ GND F S + SG++ T+ +D
Sbjct: 1700 GTPVVVTQAQSG--SALYYDISLGNDEGCF------------SIDQNSGIV-TTACVLDY 1744
Query: 72 EEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
E+ QY +++ AT++ +N E +T+ V+D NDN+PV KVY G + + +
Sbjct: 1745 EQKQQYLIIVRATNL--VNSWTEMALTIHVVDVNDNAPVLEPKVY---FGTISEAAEPSS 1799
Query: 131 SHWKKFSSIGSVSATDADGDKVAY 154
S V+ATDAD D A+
Sbjct: 1800 VVMTNESLPLVVTATDADRDINAH 1823
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 68/138 (49%), Gaps = 16/138 (11%)
Query: 14 PILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREE 73
P+L + + + Y IT+G+ F L + ++GV+ V ++D ++
Sbjct: 2220 PVLTLIAQSPGGKPLIYDITEGHHKEDFRL------------DYQAGVMYVNE-ELDFDK 2266
Query: 74 VAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLK---SSLNSNV 130
A+Y L + ATD ++ VT+ V D N++ P+F Q +Y V ++ SS+ +
Sbjct: 2267 TAKYDLTVRATDSLSGAHSDVSVTIYVEDVNNHPPLFEQIMYNVSVSEVSPPGSSILTVR 2326
Query: 131 SHWKKFSSIGSVSATDAD 148
+H K +S+ S S D+D
Sbjct: 2327 AHDKDSNSVISYSVEDSD 2344
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 16/90 (17%)
Query: 26 QLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
Q + + +T G+D + F L S +GVL V +DRE Y L I A+D
Sbjct: 2975 QTMYFYLTSGDDRNHFGL-------------SDTGVLFVRQ-PLDRESQEHYILEIAASD 3020
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVY 115
G++ A T V++ + D NDN PV Q Y
Sbjct: 3021 --GLHVANTKVSIRLRDANDNGPVCIQSKY 3048
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 14/97 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ + I GN+ FALK P G ++V I + +V Y+L + +D
Sbjct: 1405 IFFRIVSGNEKKLFALKKP-----------DEGAVIVAR-RIVQSDVGAYTLGVELSD-- 1450
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
G+ K T + + V+D+N+ P F ++ Y V +L S
Sbjct: 1451 GLAKTYTEINITVIDDNNQYPEFIEETYNVEVSELVS 1487
>gi|350594501|ref|XP_003134187.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2 [Sus scrofa]
Length = 3938
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 25/204 (12%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G P+L+ S+ V Y + +GN N F++ S SG L+ T ++D
Sbjct: 1620 GSPVLLISAMSSSE--VTYELREGNKNGVFSMN------------SYSG-LISTQKNLDH 1664
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E+++ Y L I +++ G + V V ++DENDN+P+FS+ + VG + + N
Sbjct: 1665 EKISSYQLKIRGSNMAGA-FTDVMVLVYIIDENDNAPMFSKSTF---VGQVSEAAPLNSM 1720
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EY 185
+ ++ + A+D D + + YK+ P L + I P G L + + +++
Sbjct: 1721 IMDENNNPLVIHASDGDTEANSLLVYKILEPEALKFLKIDPSMGTLTVILEMDYENMPSL 1780
Query: 186 ELTVEAHDLQSPSRYAREPAQVWL 209
++ HD SP +A AQV +
Sbjct: 1781 RFSIYVHDQGSPILFAPRAAQVII 1804
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 72/162 (44%), Gaps = 28/162 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLV 80
P VRY I G+ + F + +R T++ + LL +RE YSL+
Sbjct: 65 PQWAVRYRIISGDVANVFKTEEYVVGNFCFLRIRTKNSNTALL------NREVRDSYSLI 118
Query: 81 ITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD---LKSSLNSNVSHWKKFS 137
I AT+ +A THV V +LD+ND P+FS YR + + LK S
Sbjct: 119 IQATEKTLEFEALTHVVVHILDQNDLKPLFSPPSYRVTISEDMPLK-------------S 165
Query: 138 SIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTG 176
I VSATDAD + A Y S + I P +G + L G
Sbjct: 166 PICKVSATDADLGQNAGFYYAFNTRSEMFAIHPTSGVVTLAG 207
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 93/199 (46%), Gaps = 31/199 (15%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS+ G V L L A + Q+ Y IT+G+ F + E R
Sbjct: 2862 VENSEPGEPVATLKTLDADIAEQNRQVTCY-ITEGDPLGQFGISQ-VGDEWR-------- 2911
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+ +DRE +A+Y L +TA+D G +A V + VLD NDNSP SQ +Y
Sbjct: 2912 --IFARKTLDREHMAKYLLRVTASD--GKFQASVLVEIFVLDLNDNSPQCSQLLYTG--- 2964
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-SNLVVIVPQTGELL-LT 175
K S + + H+ I +SATD D D ++ Y L P ++ + P TGEL+ LT
Sbjct: 2965 --KVSEDVPLGHF-----ILKISATDLDSDTNAQITYSLHGPGADDFKLDPHTGELITLT 3017
Query: 176 G-DPPSDDVEYELTVEAHD 193
D DV Y L +A D
Sbjct: 3018 ALDREKKDV-YSLVAKATD 3035
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 79/170 (46%), Gaps = 30/170 (17%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN+ F + +SG+L + S +D E + Y L +T D+
Sbjct: 751 YVIADGNEEGCFDIG------------LESGLLTIAS-PLDYEATSFYILNVTVYDLGTP 797
Query: 90 NKAETHV-TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K+ V TV+V D NDN+P F Y+ V + + + + V+ K A DAD
Sbjct: 798 QKSSWKVLTVNVEDWNDNAPRFPPGGYQVTVSE-DTEVGTTVAQLK---------AKDAD 847
Query: 149 GD---KVAYKLAVPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEAHD 193
+ +V Y L P+ + P TGEL++TG D S+ +Y L VEA D
Sbjct: 848 SEDNGRVRYTLLSPTEEFSLHPLTGELVVTGHLDRESES-QYILKVEARD 896
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 55/123 (44%), Gaps = 31/123 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-V 86
+ ++IT GN FA+ +P T LL T+ +DRE ++ L +T D
Sbjct: 1171 LTFNITSGNQMGVFAI-HPLTG------------LLSTARQLDRENKDEHILEVTVLDNG 1217
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQK-----------------VYRFIVGDLKSSLNSN 129
+ ++ + V V +LD NDN PVFS K VYR + DL LN
Sbjct: 1218 EPTLRSTSRVVVRILDVNDNPPVFSHKLFNVRLPERLNPVTPGPVYRLVASDLDEGLNGR 1277
Query: 130 VSH 132
V++
Sbjct: 1278 VTY 1280
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
+T+ K+GVL VT G +D E ++ + ATD + +E V V V D NDN P FSQ
Sbjct: 2161 TTDFKTGVLTVT-GPLDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQL 2219
Query: 114 VY 115
VY
Sbjct: 2220 VY 2221
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 30/188 (15%)
Query: 26 QLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
++V +TQ N + LK P++ +++G L+ T+ +D + A Y L I +
Sbjct: 379 RVVMVKVTQALANLKYVLK-PSSEGAGFKLNARTG-LITTTKLVDFHDRAHYQLEIRTSP 436
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ A T V +D++D N+++P+FS+ Y +S+ + N+ +S+ +++AT
Sbjct: 437 ----SLASTTVVIDIMDCNNHAPMFSKSSY-------ESTFDENI---PPGTSVLTITAT 482
Query: 146 DADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT-------VEAHDLQ 195
D D + V Y + P+ + + ++ T P ++YEL V A D
Sbjct: 483 DKDHGENGYVTYSITRPNAVPFSIDPYLGIISTSKP----MDYELMNRIYTFRVRASDWG 538
Query: 196 SPSRYARE 203
SP R +E
Sbjct: 539 SPFRREKE 546
>gi|306922625|gb|ADN07503.1| cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog)
[Microtus ochrogaster]
Length = 3310
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 484 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 542
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 543 KRY---VAQVREDV-------RPHTVVLRVTATDQDKDANGLVHYNIISGNSRGHFAIDS 592
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 593 LTGEIQVVA--PLDFEAEREYALRIRAQDAGRP 623
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 88/322 (27%), Positives = 132/322 (40%), Gaps = 67/322 (20%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVR--YSITQGNDNHTFALKNPTTHEIRNSTESKS 59
EN +GT V + V + P + R YS+ AL N + E+ S + +S
Sbjct: 331 ENEAAGTSV----LRVVAQDPDPGEAGRLVYSLA--------ALMNSRSLELF-SIDPQS 377
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFI 118
G L+ T+ +DRE + ++ L +TA D A T V V V D ND++PVF Q YR
Sbjct: 378 G-LIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYR-- 434
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLA-------VPSNLVVIVPQ 168
+L NV ++ I + ATD D A Y+ + I P+
Sbjct: 435 -----ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFVGSPAARKEAAAAFEIDPR 486
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVWLQFNSPVLQDEQLLQMID 226
+G + +G + +E YEL VEA D Q P P ++ + VL D
Sbjct: 487 SGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSATVRVHITVL---------D 532
Query: 227 RKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGRIVFALEKETEREKFKIRD 280
AP EKR V + VRP R+ ++ D + G + + + R F I
Sbjct: 533 ENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDQDKDANGLVHYNIISGNSRGHFAID- 591
Query: 281 ENPWITVDENGDVRVKKRWDFE 302
G+++V DFE
Sbjct: 592 -------SLTGEIQVVAPLDFE 606
Score = 43.1 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 560 LRVTATDQDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVVA-PLDFE 606
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y+L I A D ++ ++ V+D ND++P+F ++ V + + L +V
Sbjct: 607 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLE-NAPLGHSV 665
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKLA--VPSNLVVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L P VI TG + ++G + VE Y
Sbjct: 666 IH------IQAVDADHGENSRLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYFF 719
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 720 GVEARDHGSP 729
Score = 41.6 bits (96), Expect = 0.44, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 30/179 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 1073 ENSIVGSVVA--QITAVDPDEGPNAHIMYQIVEGNIPELFQM------------DIFSGE 1118
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIV 119
L D+D E +Y +V+ AT +++A HV + +D+NDNSPV + Q ++ V
Sbjct: 1119 LTALI-DLDYEARQEYVIVVQATSAPLVSRATVHVRL--VDQNDNSPVLNNFQILFNNYV 1175
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
+ + S + IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1176 SNRSDTFPSGI--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1226
Score = 41.2 bits (95), Expect = 0.64, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y
Sbjct: 706 SGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHL------- 758
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
LN + + +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 759 RLNEDAA---VGTSVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLD 815
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 816 YKQERYFKLVLTASD 830
Score = 38.9 bits (89), Expect = 3.1, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 86/218 (39%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 976 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1023
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V Y L A D +G+ T V++ V D NDN+PVF + + V + NS V
Sbjct: 1024 AVPVYELTAYAVD-RGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1077
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1078 G-----SVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1132
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 1133 YVIVVQATSAPLVSRATVHVRLVDQNDNSPVLNNFQIL 1170
Score = 38.1 bits (87), Expect = 5.8, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+D E+ Y+L ITA D KA+T +V V V D NDN+P F Y +V +
Sbjct: 914 LDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSE------ 967
Query: 128 SNVSHWKKFSSIGSVSATDADG 149
F+S+ +SATD D
Sbjct: 968 ----DAPPFTSVLQISATDRDA 985
>gi|306922617|gb|ADN07496.1| cadherin, EGF LAG seven-pass G-type receptor 3 (flamingo homolog),
5 prime [Microtus ochrogaster]
Length = 3301
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 484 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 542
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 543 KRY---VAQVREDV-------RPHTVVLRVTATDQDKDANGLVHYNIISGNSRGHFAIDS 592
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 593 LTGEIQVVA--PLDFEAEREYALRIRAQDAGRP 623
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 88/322 (27%), Positives = 132/322 (40%), Gaps = 67/322 (20%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVR--YSITQGNDNHTFALKNPTTHEIRNSTESKS 59
EN +GT V + V + P + R YS+ AL N + E+ S + +S
Sbjct: 331 ENEAAGTSV----LRVVAQDPDPGEAGRLVYSLA--------ALMNSRSLELF-SIDPQS 377
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFI 118
G L+ T+ +DRE + ++ L +TA D A T V V V D ND++PVF Q YR
Sbjct: 378 G-LIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYR-- 434
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLA-------VPSNLVVIVPQ 168
+L NV ++ I + ATD D A Y+ + I P+
Sbjct: 435 -----ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFVGSPAARKEAAAAFEIDPR 486
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVWLQFNSPVLQDEQLLQMID 226
+G + +G + +E YEL VEA D Q P P ++ + VL D
Sbjct: 487 SGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSATVRVHITVL---------D 532
Query: 227 RKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGRIVFALEKETEREKFKIRD 280
AP EKR V + VRP R+ ++ D + G + + + R F I
Sbjct: 533 ENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDQDKDANGLVHYNIISGNSRGHFAID- 591
Query: 281 ENPWITVDENGDVRVKKRWDFE 302
G+++V DFE
Sbjct: 592 -------SLTGEIQVVAPLDFE 606
Score = 43.1 bits (100), Expect = 0.16, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 560 LRVTATDQDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVVA-PLDFE 606
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y+L I A D ++ ++ V+D ND++P+F ++ V + + L +V
Sbjct: 607 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLE-NAPLGHSV 665
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKLA--VPSNLVVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L P VI TG + ++G + VE Y
Sbjct: 666 IH------IQAVDADHGENSRLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYFF 719
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 720 GVEARDHGSP 729
Score = 41.6 bits (96), Expect = 0.45, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 30/179 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 1073 ENSIVGSVVA--QITAVDPDEGPNAHIMYQIVEGNIPELFQM------------DIFSGE 1118
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIV 119
L D+D E +Y +V+ AT +++A HV + +D+NDNSPV + Q ++ V
Sbjct: 1119 LTALI-DLDYEARQEYVIVVQATSAPLVSRATVHVRL--VDQNDNSPVLNNFQILFNNYV 1175
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
+ + S + IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1176 SNRSDTFPSGI--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1226
Score = 41.2 bits (95), Expect = 0.64, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y
Sbjct: 706 SGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHL------- 758
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
LN + + +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 759 RLNEDAA---VGTSVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLD 815
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 816 YKQERYFKLVLTASD 830
Score = 38.9 bits (89), Expect = 3.2, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 86/218 (39%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 976 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1023
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V Y L A D +G+ T V++ V D NDN+PVF + + V + NS V
Sbjct: 1024 AVPVYELTAYAVD-RGVPPLRTPVSIQVTIQDVNDNAPVFPAEEFEVRVKE-----NSIV 1077
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1078 G-----SVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1132
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 1133 YVIVVQATSAPLVSRATVHVRLVDQNDNSPVLNNFQIL 1170
Score = 38.1 bits (87), Expect = 5.5, Method: Composition-based stats.
Identities = 49/164 (29%), Positives = 68/164 (41%), Gaps = 21/164 (12%)
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+D E+ Y+L ITA D KA+T +V V V D NDN+P F Y +V +
Sbjct: 914 LDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSE------ 967
Query: 128 SNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN---LVVIVPQTGELLLTGDPPSD 181
F+S+ +SATD D +V Y + I P +G + +
Sbjct: 968 ----DAPPFTSVLQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVRTVRRLDRE 1023
Query: 182 DVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQL 221
V YELT A D P QV +Q N+PV E+
Sbjct: 1024 AVPVYELTAYAVDRGVPPLRTPVSIQVTIQDVNDNAPVFPAEEF 1067
>gi|359318948|ref|XP_003638955.1| PREDICTED: protocadherin beta-4-like [Canis lupus familiaris]
Length = 795
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 112/256 (43%), Gaps = 51/256 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT +D+ K + ++TV V D NDN+P FSQ Y V +
Sbjct: 402 LVTESPLDRESQAEYNITITVSDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IG+VSATD D +V Y L P ++LV I G+
Sbjct: 462 ----NNSPALH------IGTVSATDRDAGANAQVTYSLLPPRDPHLPLASLVSINADNGQ 511
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ-----L 221
L + ++ +E+ V A D SP+ ++ +V + N+P VL Q
Sbjct: 512 LFALRSLDYEALQAFEVRVGAADRGSPALSSQALVRVLVLDDNDNAPFVLYPLQNGSAPC 571
Query: 222 LQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDE 281
+++ R +EA + + K + + D + F L K TE F +
Sbjct: 572 TELVPRAAEAGYLVTK------------VVAVDGDSGQNAWLSFQLLKATEPGLFGV--- 616
Query: 282 NPWITVDENGDVRVKK 297
W NG+VR +
Sbjct: 617 --WA---HNGEVRTAR 627
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 79/176 (44%), Gaps = 28/176 (15%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L +Y+I+ + H RN +E K LV +DREE ++SL + A D
Sbjct: 166 LQKYTISPNSHFHVLT---------RNHSEGKKYPDLVQDKALDREEQPEFSLTLMALDG 216
Query: 87 KGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
++ T V + ++D NDN+P F Y V + NS + S + SVSA
Sbjct: 217 GSPPRSGTTAVRILIMDVNDNAPEFVHSPYEVQVLE-----NSPID-----SPVLSVSAR 266
Query: 146 DADG---DKVAYKLAVPSNLV----VIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
DAD V+Y L S+ + I TGE+ LT + ++ Y + +EA D
Sbjct: 267 DADAGNFGSVSYGLFQASDEIKQTFSINEVTGEIRLTKKLDFEQIKSYHVEIEAVD 322
>gi|410220660|gb|JAA07549.1| FAT tumor suppressor homolog 4 [Pan troglodytes]
gi|410307816|gb|JAA32508.1| FAT tumor suppressor homolog 4 [Pan troglodytes]
Length = 4983
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 84/185 (45%), Gaps = 40/185 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+ YSI +GN+ FA+ +S SG V L+ G +D E YSLVI A D
Sbjct: 1244 LIHYSIVKGNEERQFAI------------DSTSGQVALI--GKLDYEATPAYSLVIQAVD 1289
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
I T + +D+LDENDN+P F KS+L +V + + SV+
Sbjct: 1290 SGTIPLNSTCTLNIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVT 1338
Query: 144 ATDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
ATD+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1339 ATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQ 1395
Query: 195 QSPSR 199
P R
Sbjct: 1396 GRPPR 1400
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 35/193 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L++YSI+ GN+ FA+ S +G+L + +D E ++ + I+A D
Sbjct: 3125 LIKYSISSGNEEGIFAIN------------SSTGILTLAKA-LDYELCQKHEMTISAIDG 3171
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + VTV+V+D NDNSPVF Y V + + +++ ++AT
Sbjct: 3172 GWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTV----------LENAPSGTTVIHLNAT 3221
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
DAD +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 3222 DADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQG---FLDFETKQSYHLTVKAFNVPDE 3278
Query: 198 SRYAREPAQVWLQ 210
R + V L+
Sbjct: 3279 ERCSFATVNVQLK 3291
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V+YSI+ G+ + R ++SGV+ T +DREE Y L I ATD
Sbjct: 724 VKYSISAGDRS-------------RFQVNAQSGVI-STRMALDREEKTAYQLQIVATDGG 769
Query: 88 GINKA-ETHVTVDVLDENDNSPVFSQKVYRFI----------VGDLKSS---LNSNVSHW 133
+ + VT+ VLD DN PVFSQ Y F+ VG + +S LNSN+S+
Sbjct: 770 NLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFENVALGYHVGSVSASTMDLNSNISYL 829
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 99/258 (38%), Gaps = 44/258 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ T L T+ IDREE + Y L + A+
Sbjct: 826 ISYLITTGDQKGMFAINQVTGQ-------------LTTANVIDREEQSFYQLKVVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V D NDNSP F Q + S+N V +W+ SI A D
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAI---------ESVNV-VENWQAGHSIFQAKAVDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYARE 203
D V Y L P NL I + G + L G Y++ + A D+ P +
Sbjct: 921 DEGVNGMVLYSLKQNPKNLFTINEKNGTISLLGPLDVHAGSYQIEILASDMGVPQLSSSV 980
Query: 204 PAQVWLQ---FNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEME 260
V++ NSPV +QL + P + R ++ S+ D
Sbjct: 981 ILTVYVHDVNDNSPVF--DQLSYEVTLSESEP--VNSRFF--------KVQASDKDSGAN 1028
Query: 261 GRIVFALEKETEREKFKI 278
G I + + + + F I
Sbjct: 1029 GEIAYTIAEGNTGDAFGI 1046
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 85/176 (48%), Gaps = 31/176 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN ++F++ N T EIR+ +DRE+V+ Y L I +
Sbjct: 2701 PNGQLDYEIVNGNMENSFSI-NHATGEIRSVRP------------LDREKVSHYVLTIKS 2747
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D KG T V V ++LDENDN+P FSQ ++ V + SSL V+
Sbjct: 2748 SD-KGSPSQSTSVKVMINILDENDNAPRFSQ-IFSAHVPE-NSSLGYTVTR--------- 2795
Query: 142 VSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ +D D A Y + S I P TG+++++ +D + Y + V AHD
Sbjct: 2796 VTTSDEDVGINAISRYSIMDASLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2851
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 82/194 (42%), Gaps = 38/194 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I +GN+ F L N + + + LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIIRGNEAGRFRLD-----ITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KGE 227
Query: 90 NKAETH--VTVDVLDENDNSPVFSQKVYR------FIVGDLKSSLNSNVSHWKKFSSIGS 141
K + V V V D NDN PVF Y+ +VG SS+
Sbjct: 228 PKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVG----------------SSVLQ 271
Query: 142 VSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQ 195
V+A DAD + Y+L + P+TG L+T P D +Y LTV+A D
Sbjct: 272 VAAADADEGTNADIRYRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTVQAMDRG 329
Query: 196 SPSRYAREPAQVWL 209
PS R A + L
Sbjct: 330 VPSLTGRAEALIQL 343
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1754 GDGSKIMQLTAMDADEGANALVTYTIISGADD-SFRI------------DPESGDLIATR 1800
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND++P FS+ VY F
Sbjct: 1801 -RLDRERRSKYSLLVRADD--GLQSSDMRINITVSDVNDHTPKFSRPVYSF 1848
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ Y+L + ATD KG + T V V VLD NDN+P+F+Q +Y+
Sbjct: 2109 TGELDREEVSNYTLTVVATD-KGQPSLSSSTEVVVVVLDINDNNPIFAQALYK 2160
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + + A + + VRY I GN N F + +S +G
Sbjct: 2165 ENTLTGTDI--IQVFAADGDEGTNGQVRYGIVNGNTNQEFRI------------DSVTGA 2210
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
+ V +DRE+ Y L + ATD + +T V++ +LD ND PVF Y
Sbjct: 2211 ITVAK-PLDREKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPY 2264
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 19/91 (20%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGD 121
L T +DREE A YSL++ ATD+ ++ + V +LD NDNSPVF Y
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQY------ 694
Query: 122 LKSSLNSNVSHWKK----FSSIGSVSATDAD 148
+H K+ S I +VSATD D
Sbjct: 695 --------FAHIKENEPGGSYITTVSATDPD 717
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 33/177 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y + GN+++ F L S SG L VT +DRE ++ L+ITATD
Sbjct: 2295 LSYVLFGGNEDNAFTL-------------SASGELGVTQ-SLDRETKERFVLMITATD-S 2339
Query: 88 GINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G T++V+ D NDN P F+ K Y + + + + V+A+
Sbjct: 2340 GSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPE----------DAPTGTDVLLVNAS 2389
Query: 146 DADGDK---VAYKLAVPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSP 197
DAD ++Y++ ++ I P TG+++ + D + D Y L V D SP
Sbjct: 2390 DADASTNAVISYRIIGGNSQFTINPSTGQIITSALLDRETKD-NYTLVVVCSDAGSP 2445
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 35/177 (19%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKV 114
K+G + V SG +DRE+ + SL + A + ++G + E V V VLD ND PVF+ V
Sbjct: 3353 KTGQIYV-SGILDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND-PPVFTLNV 3410
Query: 115 YRFIVGD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLV 163
Y + + S+ +S+ + W +FS IGS + A
Sbjct: 3411 YSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGA---------------F 3455
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
I PQTG++ +T + + + Y L+V A D +PS V L+ N P+L
Sbjct: 3456 SINPQTGQITVTAELDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML 3512
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 108/275 (39%), Gaps = 47/275 (17%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ + RYSI + T NP+T +I V S ++RE+ +Y + ++A
Sbjct: 2806 NAISRYSIMDASLPFTI---NPSTGDI------------VISRPLNREDTDRYRIRVSAH 2850
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
D T VT+ V D NDN+P FS+ Y +L + S + V A
Sbjct: 2851 DSGW--TVSTDVTIFVTDINDNAPRFSRTSYYLDCPELT----------EIGSKVAQVFA 2898
Query: 145 TDAD---GDKVAYKLAVPSNLVVIVPQTGELL---------LTGDPPSDDVEYELTVEAH 192
TD D +V Y + S I TGE+ +TG + + V +
Sbjct: 2899 TDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQNVTGFSNVNINRHSFIVTSS 2958
Query: 193 DLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDF 252
D PS + + + V ++ Q + K P + T+ +R T ID
Sbjct: 2959 DRGKPSLISETTVTINI-----VDSNDNAPQFLKSKYFTPVTKNVKVGTKLIRVTA-ID- 3011
Query: 253 SETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
+ D + + + + + KFK+ ++ WI+V
Sbjct: 3012 -DKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISV 3045
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 118/299 (39%), Gaps = 55/299 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN++ GT V L + A S + + I GN+ F E+++S +
Sbjct: 369 ENAQVGTVVALLTVTDADS-PAANGNISVQILGGNEQRHF--------EVQSSKVPNLSL 419
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKG--------INKAETHVTVDVLDENDNSPVFSQK 113
+ V S +DRE + Y+L ++ +D G + + + V D ND+ PVFSQ+
Sbjct: 420 IKVASA-LDRERIPSYNLTVSVSDNYGAPPGAAVQTRSSVASLVIFVNDINDHPPVFSQQ 478
Query: 114 VYRFIVGDLKSSLNSNVS-HWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVI-VPQ 168
VYR N+S S + +SATD D + Y + + L + +
Sbjct: 479 VYRV-----------NLSEEAPPGSYVSGISATDGDSGLNANLRYSIVSGNGLGWFHISE 527
Query: 169 TGELLLTGDPPSDDVEYE----LTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQM 224
L+ TG D E L + A D P + Q LL +
Sbjct: 528 HSGLVTTGSSGGLDRELASQIVLNISARD------QGVHPKVSYAQLVV------TLLDV 575
Query: 225 IDRKS--EAPHRIEKRRVTRAVRPTKRIDFSETDGEM--EGRIVFAL-EKETEREKFKI 278
D K P + V A T+ + TDG++ G + F+L E ET+R F++
Sbjct: 576 NDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGDLGDNGTVRFSLQEAETDRRSFRL 634
>gi|332820147|ref|XP_526682.3| PREDICTED: protocadherin Fat 4 isoform 2 [Pan troglodytes]
Length = 4981
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 84/185 (45%), Gaps = 40/185 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+ YSI +GN+ FA+ +S SG V L+ G +D E YSLVI A D
Sbjct: 1244 LIHYSIVKGNEERQFAI------------DSTSGQVALI--GKLDYEATPAYSLVIQAVD 1289
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
I T + +D+LDENDN+P F KS+L +V + + SV+
Sbjct: 1290 SGTIPLNSTCTLNIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVT 1338
Query: 144 ATDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
ATD+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1339 ATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQ 1395
Query: 195 QSPSR 199
P R
Sbjct: 1396 GRPPR 1400
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 35/193 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L++YSI+ GN+ FA+ S +G+L + +D E ++ + I+A D
Sbjct: 3123 LIKYSISSGNEEGIFAIN------------SSTGILTLAKA-LDYELCQKHEMTISAIDG 3169
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + VTV+V+D NDNSPVF Y V + + +++ ++AT
Sbjct: 3170 GWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTV----------LENAPSGTTVIHLNAT 3219
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
DAD +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 3220 DADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQG---FLDFETKQSYHLTVKAFNVPDE 3276
Query: 198 SRYAREPAQVWLQ 210
R + V L+
Sbjct: 3277 ERCSFATVNVQLK 3289
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V+YSI+ G+ + R ++SGV+ T +DREE Y L I ATD
Sbjct: 724 VKYSISAGDRS-------------RFQVNAQSGVI-STRMALDREEKTAYQLQIVATDGG 769
Query: 88 GINKA-ETHVTVDVLDENDNSPVFSQKVYRFI----------VGDLKSS---LNSNVSHW 133
+ + VT+ VLD DN PVFSQ Y F+ VG + +S LNSN+S+
Sbjct: 770 NLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFENVALGYHVGSVSASTMDLNSNISYL 829
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 99/258 (38%), Gaps = 44/258 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ T L T+ IDREE + Y L + A+
Sbjct: 826 ISYLITTGDQKGMFAINQVTGQ-------------LTTANVIDREEQSFYQLKVVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V D NDNSP F Q + S+N V +W+ SI A D
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAI---------ESVNV-VENWQAGHSIFQAKAVDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYARE 203
D V Y L P NL I + G + L G Y++ + A D+ P +
Sbjct: 921 DEGVNGMVLYSLKQNPKNLFTINEKNGTISLLGPLDVHAGSYQIEILASDMGVPQLSSSV 980
Query: 204 PAQVWLQ---FNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEME 260
V++ NSPV +QL + P + R ++ S+ D
Sbjct: 981 ILTVYVHDVNDNSPVF--DQLSYEVTLSESEP--VNSRFF--------KVQASDKDSGAN 1028
Query: 261 GRIVFALEKETEREKFKI 278
G I + + + + F I
Sbjct: 1029 GEIAYTIAEGNTGDAFGI 1046
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 85/176 (48%), Gaps = 31/176 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN ++F++ N T EIR+ +DRE+V+ Y L I +
Sbjct: 2699 PNGQLDYEIVNGNMENSFSI-NHATGEIRSVRP------------LDREKVSHYVLTIKS 2745
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D KG T V V ++LDENDN+P FSQ ++ V + SSL V+
Sbjct: 2746 SD-KGSPSQSTSVKVMINILDENDNAPRFSQ-IFSAHVPE-NSSLGYTVTR--------- 2793
Query: 142 VSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ +D D A Y + S I P TG+++++ +D + Y + V AHD
Sbjct: 2794 VTTSDEDVGINAISRYSIMDASLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2849
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 82/194 (42%), Gaps = 38/194 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I +GN+ F L N + + + LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIIRGNEAGRFRLD-----ITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KGE 227
Query: 90 NKAETH--VTVDVLDENDNSPVFSQKVYR------FIVGDLKSSLNSNVSHWKKFSSIGS 141
K + V V V D NDN PVF Y+ +VG SS+
Sbjct: 228 PKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVG----------------SSVLQ 271
Query: 142 VSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQ 195
V+A DAD + Y+L + P+TG L+T P D +Y LTV+A D
Sbjct: 272 VAAADADEGTNADIRYRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTVQAMDRG 329
Query: 196 SPSRYAREPAQVWL 209
PS R A + L
Sbjct: 330 VPSLTGRAEALIQL 343
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1754 GDGSKIMQLTAMDADEGANALVTYTIISGADD-SFRI------------DPESGDLIATR 1800
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND++P FS+ VY F
Sbjct: 1801 -RLDRERRSKYSLLVRADD--GLQSSDMRINITVSDVNDHTPKFSRPVYSF 1848
Score = 45.1 bits (105), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ Y+L + ATD KG + T V V VLD NDN+P+F+Q +Y+
Sbjct: 2109 TGELDREEVSNYTLTVVATD-KGQPSLSSSTEVVVVVLDINDNNPIFAQALYK 2160
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + + A + + VRY I GN N F + +S +G
Sbjct: 2165 ENTLTGTDI--IQVFAADGDEGTNGQVRYGIVNGNTNQEFRI------------DSVTGA 2210
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
+ V +DRE+ Y L + ATD + +T V++ +LD ND PVF Y
Sbjct: 2211 ITVAK-PLDREKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPY 2264
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 19/91 (20%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGD 121
L T +DREE A YSL++ ATD+ ++ + V +LD NDNSPVF Y
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQY------ 694
Query: 122 LKSSLNSNVSHWKK----FSSIGSVSATDAD 148
+H K+ S I +VSATD D
Sbjct: 695 --------FAHIKENEPGGSYITTVSATDPD 717
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 35/177 (19%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKV 114
K+G + V SG +DRE+ + SL + A + ++G + E V V VLD ND PVF+ V
Sbjct: 3351 KTGQIYV-SGILDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND-PPVFTLNV 3408
Query: 115 YRFIVGD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLV 163
Y + + S+ +S+ + W +FS IGS + A
Sbjct: 3409 YSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGA---------------F 3453
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
I PQTG++ +T + + + Y L+V A D +PS V L+ N P+L
Sbjct: 3454 SINPQTGQITVTAELDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 75/175 (42%), Gaps = 31/175 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y + GN+++ F L S SG L VT +DRE ++ L+ITATD
Sbjct: 2295 LSYVLFGGNEDNAFTL-------------SASGELGVTQ-SLDRETKERFVLMITATD-S 2339
Query: 88 GINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G T++V+ D NDN P F+ K Y + + + + V+A+
Sbjct: 2340 GSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPE----------DAPTGTDVLLVNAS 2389
Query: 146 DADGDKVAYKLAVPSN-LVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSP 197
DAD A + N I P TG+++ + D + D Y L V D SP
Sbjct: 2390 DADASTNAVIRIIGGNSQFTINPSTGQIITSALLDRETKD-NYTLVVVCSDAGSP 2443
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 108/275 (39%), Gaps = 47/275 (17%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ + RYSI + T NP+T +I V S ++RE+ +Y + ++A
Sbjct: 2804 NAISRYSIMDASLPFTI---NPSTGDI------------VISRPLNREDTDRYRIRVSAH 2848
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
D T VT+ V D NDN+P FS+ Y +L + S + V A
Sbjct: 2849 DSGW--TVSTDVTIFVTDINDNAPRFSRTSYYLDCPELT----------EIGSKVAQVFA 2896
Query: 145 TDAD---GDKVAYKLAVPSNLVVIVPQTGELL---------LTGDPPSDDVEYELTVEAH 192
TD D +V Y + S I TGE+ +TG + + V +
Sbjct: 2897 TDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQNVTGFSNVNINRHSFIVTSS 2956
Query: 193 DLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDF 252
D PS + + + V ++ Q + K P + T+ +R T ID
Sbjct: 2957 DRGKPSLISETTVTINI-----VDSNDNAPQFLKSKYFTPVTKNVKVGTKLIRVTA-ID- 3009
Query: 253 SETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
+ D + + + + + KFK+ ++ WI+V
Sbjct: 3010 -DKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISV 3043
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 118/299 (39%), Gaps = 55/299 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN++ GT V L + A S + + I GN+ F E+++S +
Sbjct: 369 ENAQVGTVVALLTVTDADS-PAANGNISVQILGGNEQRHF--------EVQSSKVPNLSL 419
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKG--------INKAETHVTVDVLDENDNSPVFSQK 113
+ V S +DRE + Y+L ++ +D G + + + V D ND+ PVFSQ+
Sbjct: 420 IKVASA-LDRERIPSYNLTVSVSDNYGAPPGAAVQTRSSVASLVIFVNDINDHPPVFSQQ 478
Query: 114 VYRFIVGDLKSSLNSNVS-HWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVI-VPQ 168
VYR N+S S + +SATD D + Y + + L + +
Sbjct: 479 VYRV-----------NLSEEAPPGSYVSGISATDGDSGLNANLRYSIVSGNGLGWFHISE 527
Query: 169 TGELLLTGDPPSDDVEYE----LTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQM 224
L+ TG D E L + A D P + Q LL +
Sbjct: 528 HSGLVTTGSSGGLDRELASQIVLNISARD------QGVHPKVSYAQLVV------TLLDV 575
Query: 225 IDRKS--EAPHRIEKRRVTRAVRPTKRIDFSETDGEM--EGRIVFAL-EKETEREKFKI 278
D K P + V A T+ + TDG++ G + F+L E ET+R F++
Sbjct: 576 NDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGDLGDNGTVRFSLQEAETDRRSFRL 634
>gi|297676223|ref|XP_002816042.1| PREDICTED: protocadherin beta-8 [Pongo abelii]
Length = 801
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 24/149 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVG 120
L+T +DRE A+Y++ IT TD+ G + TH+ + VL D NDN+P F+Q Y V
Sbjct: 404 LLTETPLDRESRAEYNVTITVTDL-GTPRLTTHLNMTVLVSDVNDNAPTFTQTSYTLFVR 462
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 463 E----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNG 512
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 HLFALRSLDYEALQAFEFRVGATDRGSPA 541
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE A+ L +TA D ++ T V ++VLD NDN+P F Q YR
Sbjct: 195 LVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYR----- 249
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL 156
++ S +S V + VSATDAD +++Y L
Sbjct: 250 VQISEDSPVGFL-----VVKVSATDADTGVNGEISYSL 282
>gi|194213731|ref|XP_001918122.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-16 [Equus caballus]
Length = 3293
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 75/160 (46%), Gaps = 19/160 (11%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+ G L +G +D E+ +Y L + A D G ++ ++TV V D NDN+P FSQ +Y+
Sbjct: 2321 RYGGRLSLTGPLDFEQRDRYHLQLLAHD--GPHEGRANLTVLVEDVNDNAPAFSQSLYQV 2378
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLL 174
++ + H S+I SVSATD D ++Y LA + + P G L
Sbjct: 2379 ML----------LEHTPPGSAILSVSATDRDSGANGHISYHLASSAEGFSVDPNNGTLFT 2428
Query: 175 TGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWLQ 210
T + E ++ +EA D P R AR V LQ
Sbjct: 2429 TLGTVALGREGPGVVDVVLEARDHGMPGRAARATVHVQLQ 2468
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 112/281 (39%), Gaps = 56/281 (19%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL-------LVTSGDIDREEVAQY 77
H V YSI GN F L E R + + G L LV +D E + QY
Sbjct: 2510 HATVDYSIVSGNRGRVFQL------EPRLAETGEGGGLGPRALGCLVLLEPLDFESLTQY 2563
Query: 78 SLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKF 136
+L + A D + + VTV VLD NDN PVF++ YR V + + + + + H
Sbjct: 2564 NLTVAAADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRMAVPE-DTPVGAELLH---- 2618
Query: 137 SSIGSVSATDADGDK---VAYKLAV--PSNLVVIVPQTGELLLTGDPPSD---DVEYELT 188
V A+DAD V + L+ P L + +G L LT P D +++L
Sbjct: 2619 -----VEASDADPGPHGLVRFTLSSGDPLGLFELDESSGALRLTR--PLDCETQAQHQLV 2671
Query: 189 VEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQL----------------LQMIDRKS 229
V+A D + +A P + +Q +SP L L ID +
Sbjct: 2672 VQAADPAG-AHFALAPVTIEVQDVNDHSPAFPLSLLSTSLAENQPPGTLVTTLHAIDGDA 2730
Query: 230 EAPHRIEKRRVTRAVRPTKRIDFS--ETDGEMEGRIVFALE 268
A R+ + P R F+ + GE+ R+ F E
Sbjct: 2731 GAFGRLRYSLLEAGPGPEGREAFALNSSTGELRARVAFDYE 2771
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 25/131 (19%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LVR++++ G+ F L + SG L +T +D E AQ+ LV+ A
Sbjct: 2628 PHGLVRFTLSSGDPLGLFEL------------DESSGALRLTR-PLDCETQAQHQLVVQA 2674
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G + A VT++V D ND+SP F + L +SL N +++ ++
Sbjct: 2675 ADPAGAHFALAPVTIEVQDVNDHSPAFPLSL-------LSTSLAENQPPGTLVTTLHAI- 2726
Query: 144 ATDADGDKVAY 154
DGD A+
Sbjct: 2727 ----DGDAGAF 2733
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 20/202 (9%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V + P+ + YS+ Q +++ +P T E+
Sbjct: 1111 ENQPPGTSVGR--VFATDRDSGPNGRLTYSLRQLSEDSKAFRIHPQTGEV---------- 1158
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
T +DRE + Y L++ D ++ T V + VLD NDNSP F Q G
Sbjct: 1159 --TTLQTLDRERQSSYQLLVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTFLQ-ASGAAGG 1215
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGELLLTGDP- 178
L + V +++ + + + + Y L P S L + P +GE LLT P
Sbjct: 1216 GLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFSLHPHSGE-LLTAAPL 1274
Query: 179 -PSDDVEYELTVEAHDLQSPSR 199
++ Y LT+ AHD SP R
Sbjct: 1275 IRAERPHYVLTLSAHDQGSPPR 1296
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 98/250 (39%), Gaps = 35/250 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIVG 120
L T+ +DRE+ A Y+ ++A D T VT+ V D ND++P F R +
Sbjct: 1906 LRTAAALDREQCASYAFSVSAVDGAAAGPLSTTVPVTITVRDVNDHAPTFPTSPLRLRLP 1965
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA-VPSNLVVIVPQTGELLLTG 176
SL++ + ++ A D D + Y+LA P + TGE+ +
Sbjct: 1966 RPGPSLSTPT------LPLATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVAR 2019
Query: 177 DP----PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
P P D V L + A DL P+R A V LQ S E+ + SEA
Sbjct: 2020 SPVALGPRDRV---LFIVATDLGRPARSATGVVIVGLQGES-----ERGPRFPRASSEAV 2071
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGD 292
R T V P + G G I +++ E+ F I+ IT
Sbjct: 2072 LRENAPPGTPIVSPK-----AVHAGGSSGPITYSILSGNEKGTFSIQPSTGAIT------ 2120
Query: 293 VRVKKRWDFE 302
VR + DFE
Sbjct: 2121 VRSAEGLDFE 2130
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 401 EGGEGH-FAL----------STQDSVIYLVCVARRLDREERDAYNLRVTATDSGSPPLRA 449
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + V D NDN+P F +++YR
Sbjct: 450 EATFVLHVTDVNDNAPAFDRQLYR 473
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 7/91 (7%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ TF L E R + LV +G++DRE + Y L + A D
Sbjct: 175 YALSGDGAGETFQL------ETRPGPDGAPVPELVVTGELDRENRSHYMLQLEAYDGGSP 228
Query: 90 -NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+A+ + V +LD ND++P F+Q Y +V
Sbjct: 229 PRRAQALLDVTLLDINDHAPAFNQSRYHAVV 259
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y + G D + F L S +G L V +DRE+ A++ L + A+D
Sbjct: 1575 VSYRLAAGGDGY-FRL------------HSSTGALSVVR-SLDREQRAEHVLTVVASDHG 1620
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIV 119
++ T + T+ V D ND +P F Q+ Y ++
Sbjct: 1621 SPPRSATQLLTISVADINDEAPAFQQQEYSVLL 1653
>gi|11142063|gb|AAD43762.2|AF152501_1 protocadherin beta 8 [Homo sapiens]
Length = 801
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 24/149 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVG 120
L+T +DRE A+Y++ IT TD+ G + TH+ + VL D NDN+P F+Q Y V
Sbjct: 404 LLTETPLDRESRAEYNVTITVTDL-GTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVR 462
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 463 E----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINTDNG 512
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 HLFALRSLDYEALQAFEFRVGASDRGSPA 541
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE A+ L +TA D ++ T V ++V+D NDN+P F Q YR
Sbjct: 195 LVLDNALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFQQPFYR----- 249
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQ----TGELLL 174
++ S +S +S + VSATD D +++Y L S+ + + TGE+ L
Sbjct: 250 VQISEDSPISFL-----VVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRL 304
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+ + YE+ +EA D
Sbjct: 305 KKQLDFEKFQSYEVNIEARD 324
>gi|223460164|gb|AAI36802.1| Protocadherin beta 8 [Homo sapiens]
Length = 801
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 72/149 (48%), Gaps = 24/149 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVG 120
L+T +DRE A+Y++ IT TD+ G + TH+ + VL D NDN+P F+Q Y V
Sbjct: 404 LLTETPLDRESRAEYNVTITVTDL-GTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVR 462
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 463 E----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINTDNG 512
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 HLFALRSLDYEALQAFEFRVGASDRGSPA 541
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE A+ L +TA D ++ T V ++V+D NDN+P F Q YR
Sbjct: 195 LVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFEQPFYR----- 249
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQ----TGELLL 174
++ S +S +S + VSATD D +++Y L S+ + + TGE+ L
Sbjct: 250 VQISEDSPISFL-----VVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRL 304
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+ + YE+ +EA D
Sbjct: 305 KKQLDFEKFQSYEVNIEARD 324
>gi|47209298|emb|CAF94673.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3417
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 30/184 (16%)
Query: 29 RYSITQGNDN-------HTFALKNPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYS 78
R+S+ +GND + LK P+ H E+ + + + + +V +DRE+ ++
Sbjct: 2814 RFSLVRGNDPDVGVNDIQKYTLK-PSDHFKLEVHSQPDGEKYIEMVLQNALDREKQETHT 2872
Query: 79 LVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFS 137
LV+ +D +++ T + + VLD NDN+PV SQ VYR + + N +
Sbjct: 2873 LVLIGSDGGEPHRSGTVRIHITVLDANDNAPVCSQPVYR-------AEIRENSPGG---T 2922
Query: 138 SIGSVSATDAD---GDKVAYKLAV----PSNLVVIVPQTGELLLTGDPPSDDVE-YELTV 189
+ +V ATDAD +V+Y +A SNL I QTGE+ G + + Y+L V
Sbjct: 2923 VVTTVKATDADTGLNGEVSYSIAYVAIEASNLFAINSQTGEIKAVGKLDFEKSKTYQLNV 2982
Query: 190 EAHD 193
+A D
Sbjct: 2983 QASD 2986
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 82/167 (49%), Gaps = 29/167 (17%)
Query: 38 NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HV 96
N F LK T N SK V +V +DRE SL + A D ++ T ++
Sbjct: 844 NENFILKQQT-----NPDGSKY-VEMVLQKPLDRERHPHLSLKLIAVDGGTPQRSGTVNI 897
Query: 97 TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VA 153
V VLD NDN PVF+Q +Y KSS+ N S K +S+ +VSATDAD +
Sbjct: 898 DVSVLDANDNIPVFNQDIY-------KSSVIENTS---KGTSVMTVSATDADSGSYGLIT 947
Query: 154 YKLAV----PSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHD 193
Y L+ + + I +TG + ++G P D D +YE+ VEA D
Sbjct: 948 YSLSKMKGGAAEIFTIDERTGTISVSG--PIDYEKDRKYEVRVEAKD 992
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 84/175 (48%), Gaps = 23/175 (13%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHV-TVDVLDENDNSPVFSQK 113
+E K+ +LVT +DRE ++Y++ ITA+D A + T+ V D NDN P F+QK
Sbjct: 367 SEVKNYYMLVTDEPLDREFQSEYNITITASDAGSPPLASVKILTIVVSDINDNPPTFAQK 426
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-----LVVI 165
Y D N V + + ++ A D DG K+ Y L++ SN + I
Sbjct: 427 EY-----DASILENQPVGTF-----VMNIKAVDLDGGSNAKILYHLSMDSNSETSSFLTI 476
Query: 166 VPQTGELLLTGDPPSD-DVEYELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
+TG L + + V +++ V A+D SP + V+++ N+PV+
Sbjct: 477 NSETGALYTSRLFDYEQSVHFQMKVTAYDGGSPQLSSTCALNVFIKDQNDNAPVV 531
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 25/167 (14%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET- 94
+DN F+LK + + + E +V +DRE + SL + A D ++ T
Sbjct: 1722 SDNAYFSLKQNSNADGKKYAE------MVLQKPLDRESDPRLSLKVIAVDGGAPQRSATV 1775
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK--- 151
V V VLD NDN+PVF+Q VY+ V + NS + + +V+A+DAD
Sbjct: 1776 DVHVTVLDGNDNAPVFNQSVYKATVME-----NSPADTY-----VTTVNASDADSGANSV 1825
Query: 152 VAYKLAVPS----NLVVIVPQTGELLLTGDPPSD-DVEYELTVEAHD 193
+ Y + S NL +I ++G +++ G + D ++EL ++A D
Sbjct: 1826 IKYSFSDRSHGSGNLFMIDEKSGVIVIKGSVDYEKDKKHELRIDAKD 1872
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 23/142 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET---HVTVDVLDENDNSPVFSQKVYRFIV 119
LV +DRE A++ L I D G + A T + V VLD NDN PVFSQ+VY+ V
Sbjct: 165 LVLKKALDREAQAEHVLKINGID--GGSPARTGTSSIHVRVLDANDNVPVFSQRVYKAFV 222
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPS----NLVVIVPQTGEL 172
+ NS+ + I ++ATD D +++Y + S + I P TGE+
Sbjct: 223 ME-----NSDTG-----TVITRLNATDLDEGVYGEISYSFSRLSEKMGGVFEIDPLTGEV 272
Query: 173 LLTGDPPSDDVE-YELTVEAHD 193
+ G ++ +EL V+A D
Sbjct: 273 RVAGLIDYEETSTHELDVQAKD 294
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 104/244 (42%), Gaps = 43/244 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
+VT +DRE V++Y++ IT +D + T H+ V V D ND+ P F Q Y
Sbjct: 3067 IVTEAFLDRESVSEYNITITVSDQGSPPLSSTKHINVKVSDVNDSPPKFDQAEYS----- 3121
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL-------AVPSNLVVIVPQTGE 171
K+ +N F +VSATDAD +++Y L S+LV + + G
Sbjct: 3122 -KAVPENNSPGLSVF----AVSATDADWGQNARLSYFLEEKEINGIAVSSLVSVNSENGV 3176
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSP-VLQDEQ-----L 221
+ + ++ +E V A D SP + ++ +Q N P VL Q +
Sbjct: 3177 IHALKSFDYEQIKWFEFNVTARDAGSPPLSSTATVKILIQDQNDNPPQVLYPVQTGGSMV 3236
Query: 222 LQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDE 281
+M+ R ++ + + K + + D + + L+K T+R F++ +
Sbjct: 3237 AEMVPRSADVGYLVTK------------VVAVDVDSGQNAWLSYKLQKATDRALFEVGLQ 3284
Query: 282 NPWI 285
N I
Sbjct: 3285 NGEI 3288
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVY 115
K+ LVT +DRE V+ Y++ + A+D G T + + + D NDN+PVF Q VY
Sbjct: 1948 KTYYTLVTDALLDRESVSDYNITVIASDA-GTPALSTKKNFNIKISDVNDNAPVFPQAVY 2006
>gi|363739133|ref|XP_414584.3| PREDICTED: protocadherin Fat 2 [Gallus gallus]
Length = 4403
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 33/192 (17%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN + F++ +SG L+ T ++D E+V+ Y L + T++ G
Sbjct: 1699 YEIKDGNGDGVFSMN------------YQSG-LISTQKNLDFEQVSFYQLKVRGTNMAGA 1745
Query: 90 NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
+T V + V+DENDN P+F + + +G + + + +S ATDAD
Sbjct: 1746 -FMDTMVLIYVIDENDNVPIFVKPAF---IGWIVENAPPQSMVLDESNSPLVTHATDADQ 1801
Query: 150 DK---VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDVEYELT------VEAHDLQSPS 198
D + Y++ P L + P TG L D++YELT V A D +PS
Sbjct: 1802 DSNALLVYEILEPEALKYFTVDPSTGTLTSRA-----DIDYELTPVFHFSVHARDSGNPS 1856
Query: 199 RYAREPAQVWLQ 210
+A +PA+V +
Sbjct: 1857 LFASKPAKVTIH 1868
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 72/155 (46%), Gaps = 22/155 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+RY I G+ + F + + +R T S + LL +RE Y L+I AT
Sbjct: 72 IRYRIASGDSSGLFKTEEHVIGDFCFLRIRTRSSNTALL------NREVKDSYMLIIKAT 125
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+ +A V + +LD ND P+FS Y+ + + + L + VS ++SA
Sbjct: 126 ENTFAYEAWAKVLIHILDRNDLKPLFSPPSYKVSIRE-DTPLKTVVS---------TLSA 175
Query: 145 TDADGDKVA---YKLAVPSNLVVIVPQTGELLLTG 176
TDAD + A Y L S+L I P TG ++ TG
Sbjct: 176 TDADAGQNAEFYYALNTKSDLFTIHPTTGAVVTTG 210
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
ST+ K+GVL VT G +D E ++S + ATD + +E V V+V D NDN PVFS+
Sbjct: 2224 STDFKTGVLTVT-GQLDYELQTKHSFTVRATDTALGSFSEARVEVEVEDINDNPPVFSEM 2282
Query: 114 VY 115
+Y
Sbjct: 2283 IY 2284
Score = 44.7 bits (104), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 77/182 (42%), Gaps = 23/182 (12%)
Query: 25 HQLVRYSITQ----GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLV 80
H +++ S T N T++L P E R + L TS +DRE+ Y LV
Sbjct: 3035 HFILKISATDPDVGSNAQITYSLHGPGAEEFRLGPHTGE---LTTSAPLDREQKPTYHLV 3091
Query: 81 ITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG 140
ATD G + +T+ + D NDN+P RF ++ N + + I
Sbjct: 3092 AKATDGGG-RSCQADITLTIEDTNDNAP-------RFFPSHCAVAVFDNTT---TKTPIA 3140
Query: 141 SVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDD--VEYELTVEAHDLQ 195
VSA D D +V Y L+ +N + +T ++ P D +ELTV A D
Sbjct: 3141 VVSARDLDEGLNAEVVYSLSDSANGHFSIEETTGVIRLEKPLKDSQHSAFELTVCATDQG 3200
Query: 196 SP 197
+P
Sbjct: 3201 TP 3202
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 27/151 (17%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I+ GN + F + + + G+L + S +D E + Y L IT D+
Sbjct: 754 YVISDGNVDSCFTI------------DLELGLLQILS-PLDHERTSFYILNITVYDLGTP 800
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K+ + V+VLD NDN+P F Q Y + + NV ++I + A DAD
Sbjct: 801 QKSSWKLLAVNVLDTNDNTPRFPQGAYWVAIPE-------NVVTG---TTIAQLKAEDAD 850
Query: 149 GD---KVAYKLAVPSNLVVIVPQTGELLLTG 176
D +V Y L P++ I TGE+ + G
Sbjct: 851 TDDNGRVKYSLLTPTDKFAINSVTGEVTVIG 881
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 30/181 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
++Y I GND+ F L S +G L + +G +D E +Y L I T
Sbjct: 3260 IKYEIVNGNDHGKFQLN------------SNTGALYI-NGSLDFEASHEYYLSIEGTRKG 3306
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+ ++ T V +++ D ND++P F Q Y D++ ++ V I +VSA D
Sbjct: 3307 SASLSDVTMVVINITDINDHAPEFIQDPY---FADIRE--DAAVGEI-----ILTVSADD 3356
Query: 147 ADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPSRY 200
DG +++ Y + P I P++G++ + +++ Y LTV A D P+++
Sbjct: 3357 LDGAMNNQITYSIVEGNPLGHFAIQPKSGQISIAKHLDREEISSYSLTVRATDNGHPAQF 3416
Query: 201 A 201
+
Sbjct: 3417 S 3417
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI +GN FA+ + KSG + + + +DREE++ YSL + ATD
Sbjct: 3365 ITYSIVEGNPLGHFAI------------QPKSGQISI-AKHLDREEISSYSLTVRATDNG 3411
Query: 88 GINK-AETHVTVDVLDENDNSPVFSQKVYRFIV 119
+ ++ V V V D NDN P F Q Y +V
Sbjct: 3412 HPAQFSDVAVRVHVSDVNDNPPRFFQLNYSVVV 3444
Score = 40.4 bits (93), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 62/132 (46%), Gaps = 21/132 (15%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE+ +Y L + A+D G +A T V + VLD NDNSP Q Y V + ++
Sbjct: 2979 LDREDTEKYLLKVMASD--GKFQATTEVEIFVLDINDNSPECGQIFYTGRVSE-----DA 3031
Query: 129 NVSHWKKFSSIGSVSATDAD---GDKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVE 184
H+ I +SATD D ++ Y L P + + P TGE LT P D +
Sbjct: 3032 QPGHF-----ILKISATDPDVGSNAQITYSLHGPGAEEFRLGPHTGE--LTTSAPLDREQ 3084
Query: 185 ---YELTVEAHD 193
Y L +A D
Sbjct: 3085 KPTYHLVAKATD 3096
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 58/150 (38%), Gaps = 32/150 (21%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
MENS T V L L S + + I GN FA+ T G
Sbjct: 1149 MENSPPNTSVLQLDALDPDSSSEGK--LTFHILTGNPQGLFAINLVT------------G 1194
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQK------ 113
++ TS +DRE A++ L + +D K+ + V + VLD NDN P F K
Sbjct: 1195 LISTTSRQLDREYKAEHILEVAVSDNGDPALKSTSRVVIQVLDANDNPPSFPHKLFMVQL 1254
Query: 114 -----------VYRFIVGDLKSSLNSNVSH 132
VYR I D NS V++
Sbjct: 1255 PEREASETPLPVYRLIASDRDQGQNSQVTY 1284
>gi|297712754|ref|XP_002832900.1| PREDICTED: protocadherin alpha-13-like, partial [Pongo abelii]
Length = 454
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 22/157 (14%)
Query: 48 THEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDN 106
T + +NS E S + LV +DREE+ ++SL++TA+D K + + +LD NDN
Sbjct: 217 TLDAQNSLEQMSSLSLVLRKTLDREEIQEHSLLLTASDGGKPELTGTVQLLITILDVNDN 276
Query: 107 SPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNL 162
+P F Q VY+ V L+++ N + + +++ATD D GD + Y P +
Sbjct: 277 APEFYQSVYKVAV--LENAFNGTL--------VITLNATDPDDGTNGD-IVYSFRRPVSP 325
Query: 163 VVIV-----PQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ P GE+ G ++ + YE++VEA D
Sbjct: 326 AVVYAFTINPNNGEIRTKGKLDFEEKKLYEISVEAVD 362
>gi|109730165|gb|AAI12379.1| Pcdhb10 protein [Mus musculus]
Length = 795
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 104/250 (41%), Gaps = 39/250 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ I+ TD+ H +TV V D NDN+P F++ Y + +
Sbjct: 400 LVTEGTLDRESKAEYNITISVTDLGTPRLTTQHTITVQVSDINDNAPTFTRTSYTMFIRE 459
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVP-------SNLVVIVPQTGE 171
NS H IG++SATD+D + Y L P ++LV I G+
Sbjct: 460 ----NNSPALH------IGTISATDSDAGSNAHITYSLLPPHDPQLTLTSLVSINEDNGQ 509
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQD---EQLLQMIDR 227
L + + +E V A D SP+ ++ V VL D E + +
Sbjct: 510 LFALRTLDYEALRAFEFHVRATDRGSPALSSQALVLVV------VLDDNDNEPFVLYPLQ 563
Query: 228 KSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
S AP + R A ++ + D + F L K TE F + W
Sbjct: 564 NSSAPCKELVPRAAEAGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFSV-----WA-- 616
Query: 288 DENGDVRVKK 297
NG+VR +
Sbjct: 617 -HNGEVRTTR 625
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 17/121 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + +L++TA D ++ T V ++V+D NDN+P F Q +Y + +
Sbjct: 192 LVLDRALDREEQPELTLILTALDGGAPPRSGTTEVHIEVVDINDNAPQFIQSLYEVQILE 251
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNL---VVIVPQTGELLLT 175
S L++ V+ +VSA D D KVAY L + VI TGE+ L
Sbjct: 252 -NSPLDALVA---------TVSARDLDAGIYGKVAYSLFQDDGISQPFVIDEITGEIRLK 301
Query: 176 G 176
G
Sbjct: 302 G 302
>gi|440904071|gb|ELR54637.1| Protocadherin Fat 2 [Bos grunniens mutus]
Length = 4347
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 21/202 (10%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G PIL+ S+ V Y + +GN N F++ S SG L+ T +D
Sbjct: 1672 GSPILLISATSFSE--VTYELREGNKNGVFSMN------------SYSG-LISTQKKLDH 1716
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E+++ Y L I +++ G + V V ++DENDN+PVFS+ + + + + LNS +
Sbjct: 1717 EKISSYQLKIRGSNMAG-TFTDVMVLVYIIDENDNAPVFSKSTFMGQISE-AAPLNSMIM 1774
Query: 132 HWKKFSSIGSVSATDADGDK-VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EYEL 187
+ S +D + + + YK+ P L + I P G L + + + +
Sbjct: 1775 DENNNPLVIRASDSDKEANSLLVYKILEPETLKFLKIDPSMGTLTTVLEMDYESMPSFRF 1834
Query: 188 TVEAHDLQSPSRYAREPAQVWL 209
+ HD SP +A AQV +
Sbjct: 1835 DIYVHDQGSPILFAPRVAQVII 1856
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 90/199 (45%), Gaps = 31/199 (15%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS+ G V L L A + Q+ Y IT+G+ F + E R
Sbjct: 2914 VENSEPGEPVATLKTLDADIAEQNRQVTCY-ITEGDPLGQFGISQ-VGDEWR-------- 2963
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+ + +DRE A+Y L ITA+D G +A V + VLD NDNSP SQ +Y
Sbjct: 2964 --IFSRKTLDREHTAKYLLRITASD--GKFQASVPVEIFVLDINDNSPQCSQLLYTG--- 3016
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-SNLVVIVPQTGEL--LL 174
K S + H+ I VSATD D D ++ Y L P ++ + P TG+L L
Sbjct: 3017 --KVSEDVPPEHF-----ILKVSATDLDSDTNAQITYSLHGPGADEFKLDPHTGDLTTLT 3069
Query: 175 TGDPPSDDVEYELTVEAHD 193
D DV Y L +A D
Sbjct: 3070 ALDREKKDV-YSLVAKATD 3087
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 70/162 (43%), Gaps = 28/162 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLV 80
P VRY I G+ + F + +R T+S + LL +RE Y+L+
Sbjct: 61 PQWAVRYRIISGDVANVFKTEEYVVGNFCFLRIRTKSSNTALL------NREVRDSYTLI 114
Query: 81 ITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD---LKSSLNSNVSHWKKFS 137
I AT+ +A V V +LD+ND P+FS YR + + LK S
Sbjct: 115 IQATEKTLELEALARVVVRILDQNDLKPLFSPPSYRVTISEDMPLK-------------S 161
Query: 138 SIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTG 176
I VSATDAD + A Y S + I P +G + L G
Sbjct: 162 PICKVSATDADLGQNAEFYYAFNTRSEMFAIHPTSGVVTLAG 203
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 28/169 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN+ F + E ++G LL + +D E + Y L +T D+
Sbjct: 748 YVIADGNEEGCFDI------------ELETG-LLTVAAPLDYEATSFYVLNVTVYDLGTP 794
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K+ +TV+V D NDN+P F Y+ + + ++ V +++ + A D D
Sbjct: 795 QKSSWKLLTVNVEDWNDNAPRFPPGGYQVTISE-----DTEVG-----TTVAELKAKDVD 844
Query: 149 GD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSD-DVEYELTVEAHD 193
+ +V Y L P+ + P TGE+++TG + + Y L VEA D
Sbjct: 845 SEDNGRVRYVLLSPTEKFSLHPLTGEMVVTGHLDRESEPRYILKVEARD 893
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
+T+ K+GVL VT G +D E ++ + ATD + +E V V V D NDN P FSQ
Sbjct: 2213 TTDFKTGVLTVT-GPLDYESKTKHVFTVRATDTALGSFSEATVEVLVEDVNDNPPTFSQL 2271
Query: 114 VY 115
VY
Sbjct: 2272 VY 2273
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 88/188 (46%), Gaps = 30/188 (15%)
Query: 26 QLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
++V +T N + LK P++ S++G L+ T+ +D + AQY L I +
Sbjct: 376 RVVMVKVTPAFPNLKYVLK-PSSESAAFKLNSRTG-LITTTRLMDFHDQAQYQLRIRTS- 432
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G+ A T V +D++D N+++PVF++ Y + + N+ +S+ +V+AT
Sbjct: 433 -PGL--ASTTVVIDIMDCNNHAPVFNRSSY-------DGTFDENI---PPGTSVLTVTAT 479
Query: 146 DADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT-------VEAHDLQ 195
D D + + Y + P+ + + ++ T P ++YEL V A D
Sbjct: 480 DQDHGENGYITYSITHPNAVPFSIDPYLGIISTSKP----MDYELMNRIYTFRVRASDWG 535
Query: 196 SPSRYARE 203
SP R +E
Sbjct: 536 SPFRQEKE 543
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 31/123 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ ++IT GN F L +P T LL T+ +DRE ++ L +T D
Sbjct: 1168 LTFNITSGNHMGFFVL-HPLTG------------LLATARQLDRENKDEHILEVTVLDNG 1214
Query: 88 GIN-KAETHVTVDVLDENDNSPVFSQK-----------------VYRFIVGDLKSSLNSN 129
+ ++ + V V + D NDN PVFS K VYR + DL LN
Sbjct: 1215 EPSLRSTSRVVVRIADVNDNPPVFSHKLFNVRLPERLNPGTSGPVYRLVASDLDEGLNGR 1274
Query: 130 VSH 132
V++
Sbjct: 1275 VTY 1277
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 123/293 (41%), Gaps = 58/293 (19%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQL---VRYSITQGNDNHTFALKNPTTHEIRNSTESK 58
ENS SGT V +V ++H L ++Y + G F++ T
Sbjct: 1039 ENSPSGTSV-----MVVAAHDDDTGLDGELQYFLRGGTGLAAFSINQDTG---------- 1083
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRF 117
++ T +DRE + Y L + A D I + T V ++VLD NDN P S+ V+
Sbjct: 1084 ---MIQTLAPLDREFASCYWLTVLAVDRGSIPLSSVTEVYIEVLDVNDNPPQMSRPVFYP 1140
Query: 118 IVGDLKSSLNSNVSHWKKF----SSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELL 173
V + + L+++V + SS G ++ G+ + + V+ P TG LL
Sbjct: 1141 TVRE-DAPLHTSVLQLDAWDLDSSSKGKLTFNITSGNHMGF--------FVLHPLTG-LL 1190
Query: 174 LTG---DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQF-----NSPVLQDEQLLQMI 225
T D + D E+ L V D PS R ++V ++ N PV +L +
Sbjct: 1191 ATARQLDRENKD-EHILEVTVLDNGEPS--LRSTSRVVVRIADVNDNPPVFS-HKLFNV- 1245
Query: 226 DRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKI 278
R+ +R P R+ S+ D + GR+ +++E E++ F I
Sbjct: 1246 --------RLPERLNPGTSGPVYRLVASDLDEGLNGRVTYSIE-ESDEAGFSI 1289
>gi|395845725|ref|XP_003795575.1| PREDICTED: protocadherin Fat 4 isoform 2 [Otolemur garnettii]
Length = 4981
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+RYSI+ GN+ FAL S +G+L + +D E ++ ++I+A D
Sbjct: 3123 LIRYSISSGNEEGIFALN------------SSTGILTLAKA-LDYELCQKHEMMISAVDG 3169
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + VTV+V+D NDNSPVF Y V + + +++ ++AT
Sbjct: 3170 GWVARTGYCSVTVNVIDVNDNSPVFLSDEYFPTV----------LENAPSGTTVIHLNAT 3219
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
DAD +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 3220 DADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQG---FLDFETKQSYHLTVKAFNVPDE 3276
Query: 198 SRYAREPAQVWLQ 210
R + + L+
Sbjct: 3277 ERCSFTTVNIQLK 3289
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 60/124 (48%), Gaps = 28/124 (22%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ V+YSI+ G+ + R ++SGV+ T +DREE Y L I A
Sbjct: 720 PNGTVKYSISAGDRS-------------RFQVNAQSGVI-STRMALDREEKTAYQLQIVA 765
Query: 84 TDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFI----------VGDLKSS---LNSN 129
TD + + VT+ VLD DN PVFSQ Y F+ VG + +S LNSN
Sbjct: 766 TDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFENVALGYQVGSVSASTMDLNSN 825
Query: 130 VSHW 133
+S+
Sbjct: 826 ISYL 829
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 85/185 (45%), Gaps = 40/185 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+ YSI +GN+ F++ +S SG V L+ G +D E YSL+I A D
Sbjct: 1244 LIHYSIIKGNEERQFSI------------DSSSGQVALI--GKLDYETTPAYSLIIQAVD 1289
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
I+ T + +D+LDENDN+P F KS+L +V + + SV+
Sbjct: 1290 SGTISLNSTCTLNIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVT 1338
Query: 144 ATDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
ATD+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1339 ATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQ 1395
Query: 195 QSPSR 199
P R
Sbjct: 1396 GRPPR 1400
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ Y+L + ATD KG + T V V VLD NDN+P+F+Q +Y+
Sbjct: 2109 TGELDREEVSNYTLTVVATD-KGQPSLSSSTEVVVMVLDINDNNPIFAQALYK 2160
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 83/195 (42%), Gaps = 40/195 (20%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVL-LVTSGDIDREEVAQYSLVITATDVKG 88
Y I QGN+ F L +I + + L LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIIQGNEAGRFRL------DITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KG 226
Query: 89 INKAETH--VTVDVLDENDNSPVFSQKVYR------FIVGDLKSSLNSNVSHWKKFSSIG 140
K + V V V D NDN PVF Y+ +VG SS+
Sbjct: 227 EPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVG----------------SSVL 270
Query: 141 SVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDL 194
V+A DAD + Y+L + P+TG L+T P D +Y LT++A D
Sbjct: 271 QVAAADADEGTNADIRYRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTLQAMDR 328
Query: 195 QSPSRYAREPAQVWL 209
PS R A + L
Sbjct: 329 GVPSLTGRAEALIQL 343
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 16/91 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I +GN+ ++F++ N T EIR+ +DRE+V+QY L + +
Sbjct: 2699 PNGQLDYEIVKGNEENSFSI-NHATGEIRSIRP------------LDREKVSQYMLTVKS 2745
Query: 84 TDVKGINKAETH--VTVDVLDENDNSPVFSQ 112
+D KG T V +++LDENDN+P FSQ
Sbjct: 2746 SD-KGSPSQSTSIKVIINILDENDNAPRFSQ 2775
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 98/258 (37%), Gaps = 44/258 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ F + T L T+ IDREE + Y L + A+
Sbjct: 826 ISYLITTGDQKGMFTINQVTGQ-------------LSTASVIDREEQSFYQLKVVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V D NDNSP F Q V S+N V +W+ SI A D
Sbjct: 871 GTVTGDTVVNITVKDLNDNSPHFLQAV---------ESVNV-VENWQAGHSIFQAKAVDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYARE 203
D V Y L P NL I + G + L G Y++ + A D+ P +
Sbjct: 921 DEGVNGMVLYSLKQNPKNLFAINEKNGNISLLGPLDVHAGSYQIEILASDMGVPQLSSSL 980
Query: 204 PAQVWLQ---FNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEME 260
V++ NSPV +QL + P + R ++ S+ D
Sbjct: 981 ILTVYVHDVNDNSPVF--DQLSYEVTLSESEP--VNSRFF--------KVQASDKDSGAN 1028
Query: 261 GRIVFALEKETEREKFKI 278
G I + + + + F I
Sbjct: 1029 GEIAYTIAEGNTGDAFGI 1046
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1754 GDGSKIMQLTAMDADEGANALVTYTIISGADD-SFRI------------DPESGDLIATK 1800
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND++P FS+ VY F
Sbjct: 1801 -RLDRERRSKYSLLVRADD--GLQSSDVRINITVSDVNDHTPKFSRPVYSF 1848
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVF 110
L T +DREE A YSL++ ATD+ ++ + V +LD NDNSPVF
Sbjct: 641 LSTVSSLDREEQAFYSLLVVATDLGSPPQSSMVRINVSLLDINDNSPVF 689
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + + A + + VRY I GN N F + +S +G
Sbjct: 2165 ENTLTGTDI--IQVFAADGDEGTNGQVRYGIVGGNANQEFRI------------DSVTGA 2210
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
+ V +DRE+ Y L + ATD + +T V++ +LD ND P+F Y
Sbjct: 2211 ITVAK-PLDREKTPTYLLTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPY 2264
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 35/177 (19%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKV 114
K+G + V SG +DRE+ + SL + A + ++G + E V V VLD ND P+FS +
Sbjct: 3351 KTGQIYV-SGILDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND-PPIFSLNI 3408
Query: 115 YRFIVGD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLV 163
Y + + S+ +S+ + W +FS IGS + A
Sbjct: 3409 YSVQISEGVPVGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGA---------------F 3453
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
I PQTG++ +T + + + Y L+V A D +PS V L+ N P+L
Sbjct: 3454 SINPQTGQITVTAELDRETLPIYNLSVLAVDSGTPSATGSATLLVTLEDINDNGPML 3510
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 19/91 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y + GN+++ F L S SG L V +DRE Q+ L +TATD
Sbjct: 2295 ISYVLFGGNEDNAFTL-------------SASGELRVIQ-SLDRESKEQFVLTVTATDSG 2340
Query: 88 G---INKAETHVTVDVLDENDNSPVFSQKVY 115
HV VD D NDN P F+ K+Y
Sbjct: 2341 SPALTGTGTIHVIVD--DVNDNVPTFASKMY 2369
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 30/156 (19%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN++ GT V L + A S + + I GN+ F E+++S +
Sbjct: 369 ENAQVGTVVALLTVTDADS-PAANGNISVQILGGNEQRHF--------EVQSSKVPNLSL 419
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAET--------HVTVDVLDENDNSPVFSQK 113
+ V S +DRE + Y+L ++ +D G A + + V D ND+ PVF+Q+
Sbjct: 420 IKVASA-LDRERIPSYNLTVSVSDNYGAPPAAAVQARSSVASLVIFVNDINDHPPVFAQQ 478
Query: 114 VYRFIVGDLKSSLNSNVS-HWKKFSSIGSVSATDAD 148
VYR N+S S + VSATD D
Sbjct: 479 VYRV-----------NLSEEAPPGSYVCGVSATDGD 503
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 112/276 (40%), Gaps = 46/276 (16%)
Query: 30 YSITQGND--NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+++T +D N A + + T K GVL V +DRE + Y+LV+ D+
Sbjct: 1966 FNVTDADDGINSQLAYSIASGDSLGQFTIDKDGVLKVLKA-LDRESQSFYNLVVQVHDLP 2024
Query: 88 GINKAE----THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV- 142
+ + V++ +LD NDN P F L+ +++ + + I +V
Sbjct: 2025 QLAASRFTSTAQVSIILLDVNDNPPAF---------------LSPKLTYIPENTPIDTVV 2069
Query: 143 ---SATDADG---DKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDL 194
ATD D + Y L P N I GE+ LTG+ ++V Y LTV A D
Sbjct: 2070 FKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDK 2129
Query: 195 QSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRID 251
PS + V + N+P+ ++A +++E T ++
Sbjct: 2130 GQPSLSSSTEVVVMVLDINDNNPIF------------AQALYKVEINENTLTGTDIIQVF 2177
Query: 252 FSETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
++ D G++ + + ++F+I ITV
Sbjct: 2178 AADGDEGTNGQVRYGIVGGNANQEFRIDSVTGAITV 2213
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 100/244 (40%), Gaps = 46/244 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+V S ++RE+ ++ + ++A D T VT+ V D NDN+P FS+ Y +L
Sbjct: 2827 IVISRPLNREDTDRFRIRVSAHDSGW--TVSTDVTIFVTDVNDNAPRFSRPSYYLDCPEL 2884
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELL------ 173
+ + S V+ VSATD D +V Y + S I TGE+
Sbjct: 2885 -TEIGSRVTQ---------VSATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILK 2934
Query: 174 ---LTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSE 230
++G ++ + V + D +PS + + ++D
Sbjct: 2935 YQNVSGFSNANINRHSFIVTSSDRGNPSLISETTVTI---------------NIVDSNDN 2979
Query: 231 APHRIEKRR---VTRAVR-PTKRIDFSETDGE---MEGRIVFALEKETEREKFKIRDENP 283
AP + + VT+ V+ TK I + D + + + + + E KFK+ ++
Sbjct: 2980 APQFLTIKYFTPVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFISNENHLGKFKLDNDTG 3039
Query: 284 WITV 287
WI+V
Sbjct: 3040 WISV 3043
>gi|395845723|ref|XP_003795574.1| PREDICTED: protocadherin Fat 4 isoform 1 [Otolemur garnettii]
Length = 4982
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+RYSI+ GN+ FAL S +G+L + +D E ++ ++I+A D
Sbjct: 3125 LIRYSISSGNEEGIFALN------------SSTGILTLAKA-LDYELCQKHEMMISAVDG 3171
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + VTV+V+D NDNSPVF Y V + + +++ ++AT
Sbjct: 3172 GWVARTGYCSVTVNVIDVNDNSPVFLSDEYFPTV----------LENAPSGTTVIHLNAT 3221
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
DAD +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 3222 DADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQG---FLDFETKQSYHLTVKAFNVPDE 3278
Query: 198 SRYAREPAQVWLQ 210
R + + L+
Sbjct: 3279 ERCSFTTVNIQLK 3291
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 60/124 (48%), Gaps = 28/124 (22%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ V+YSI+ G+ + R ++SGV+ T +DREE Y L I A
Sbjct: 720 PNGTVKYSISAGDRS-------------RFQVNAQSGVI-STRMALDREEKTAYQLQIVA 765
Query: 84 TDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFI----------VGDLKSS---LNSN 129
TD + + VT+ VLD DN PVFSQ Y F+ VG + +S LNSN
Sbjct: 766 TDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFENVALGYQVGSVSASTMDLNSN 825
Query: 130 VSHW 133
+S+
Sbjct: 826 ISYL 829
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 85/185 (45%), Gaps = 40/185 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+ YSI +GN+ F++ +S SG V L+ G +D E YSL+I A D
Sbjct: 1244 LIHYSIIKGNEERQFSI------------DSSSGQVALI--GKLDYETTPAYSLIIQAVD 1289
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
I+ T + +D+LDENDN+P F KS+L +V + + SV+
Sbjct: 1290 SGTISLNSTCTLNIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVT 1338
Query: 144 ATDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
ATD+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1339 ATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQ 1395
Query: 195 QSPSR 199
P R
Sbjct: 1396 GRPPR 1400
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ Y+L + ATD KG + T V V VLD NDN+P+F+Q +Y+
Sbjct: 2109 TGELDREEVSNYTLTVVATD-KGQPSLSSSTEVVVMVLDINDNNPIFAQALYK 2160
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 83/195 (42%), Gaps = 40/195 (20%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVL-LVTSGDIDREEVAQYSLVITATDVKG 88
Y I QGN+ F L +I + + L LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIIQGNEAGRFRL------DITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KG 226
Query: 89 INKAETH--VTVDVLDENDNSPVFSQKVYR------FIVGDLKSSLNSNVSHWKKFSSIG 140
K + V V V D NDN PVF Y+ +VG SS+
Sbjct: 227 EPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVG----------------SSVL 270
Query: 141 SVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDL 194
V+A DAD + Y+L + P+TG L+T P D +Y LT++A D
Sbjct: 271 QVAAADADEGTNADIRYRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTLQAMDR 328
Query: 195 QSPSRYAREPAQVWL 209
PS R A + L
Sbjct: 329 GVPSLTGRAEALIQL 343
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 16/91 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I +GN+ ++F++ N T EIR+ +DRE+V+QY L + +
Sbjct: 2701 PNGQLDYEIVKGNEENSFSI-NHATGEIRSIRP------------LDREKVSQYMLTVKS 2747
Query: 84 TDVKGINKAETH--VTVDVLDENDNSPVFSQ 112
+D KG T V +++LDENDN+P FSQ
Sbjct: 2748 SD-KGSPSQSTSIKVIINILDENDNAPRFSQ 2777
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 98/258 (37%), Gaps = 44/258 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ F + T L T+ IDREE + Y L + A+
Sbjct: 826 ISYLITTGDQKGMFTINQVTGQ-------------LSTASVIDREEQSFYQLKVVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V D NDNSP F Q V S+N V +W+ SI A D
Sbjct: 871 GTVTGDTVVNITVKDLNDNSPHFLQAV---------ESVNV-VENWQAGHSIFQAKAVDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYARE 203
D V Y L P NL I + G + L G Y++ + A D+ P +
Sbjct: 921 DEGVNGMVLYSLKQNPKNLFAINEKNGNISLLGPLDVHAGSYQIEILASDMGVPQLSSSL 980
Query: 204 PAQVWLQ---FNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEME 260
V++ NSPV +QL + P + R ++ S+ D
Sbjct: 981 ILTVYVHDVNDNSPVF--DQLSYEVTLSESEP--VNSRFF--------KVQASDKDSGAN 1028
Query: 261 GRIVFALEKETEREKFKI 278
G I + + + + F I
Sbjct: 1029 GEIAYTIAEGNTGDAFGI 1046
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1754 GDGSKIMQLTAMDADEGANALVTYTIISGADD-SFRI------------DPESGDLIATK 1800
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND++P FS+ VY F
Sbjct: 1801 -RLDRERRSKYSLLVRADD--GLQSSDVRINITVSDVNDHTPKFSRPVYSF 1848
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVF 110
L T +DREE A YSL++ ATD+ ++ + V +LD NDNSPVF
Sbjct: 641 LSTVSSLDREEQAFYSLLVVATDLGSPPQSSMVRINVSLLDINDNSPVF 689
Score = 41.2 bits (95), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + + A + + VRY I GN N F + +S +G
Sbjct: 2165 ENTLTGTDI--IQVFAADGDEGTNGQVRYGIVGGNANQEFRI------------DSVTGA 2210
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
+ V +DRE+ Y L + ATD + +T V++ +LD ND P+F Y
Sbjct: 2211 ITVAK-PLDREKTPTYLLTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPY 2264
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 35/177 (19%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKV 114
K+G + V SG +DRE+ + SL + A + ++G + E V V VLD ND P+FS +
Sbjct: 3353 KTGQIYV-SGILDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND-PPIFSLNI 3410
Query: 115 YRFIVGD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLV 163
Y + + S+ +S+ + W +FS IGS + A
Sbjct: 3411 YSVQISEGVPVGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGA---------------F 3455
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
I PQTG++ +T + + + Y L+V A D +PS V L+ N P+L
Sbjct: 3456 SINPQTGQITVTAELDRETLPIYNLSVLAVDSGTPSATGSATLLVTLEDINDNGPML 3512
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 19/91 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y + GN+++ F L S SG L V +DRE Q+ L +TATD
Sbjct: 2295 ISYVLFGGNEDNAFTL-------------SASGELRVIQ-SLDRESKEQFVLTVTATDSG 2340
Query: 88 G---INKAETHVTVDVLDENDNSPVFSQKVY 115
HV VD D NDN P F+ K+Y
Sbjct: 2341 SPALTGTGTIHVIVD--DVNDNVPTFASKMY 2369
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 30/156 (19%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN++ GT V L + A S + + I GN+ F E+++S +
Sbjct: 369 ENAQVGTVVALLTVTDADS-PAANGNISVQILGGNEQRHF--------EVQSSKVPNLSL 419
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAET--------HVTVDVLDENDNSPVFSQK 113
+ V S +DRE + Y+L ++ +D G A + + V D ND+ PVF+Q+
Sbjct: 420 IKVASA-LDRERIPSYNLTVSVSDNYGAPPAAAVQARSSVASLVIFVNDINDHPPVFAQQ 478
Query: 114 VYRFIVGDLKSSLNSNVS-HWKKFSSIGSVSATDAD 148
VYR N+S S + VSATD D
Sbjct: 479 VYRV-----------NLSEEAPPGSYVCGVSATDGD 503
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 19/116 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ +GT V L + + + + ++ Y I GN T NP+T +I
Sbjct: 2375 EDAPTGTDV--LLVNASDADASANAVISYRIIGGNSQFTI---NPSTGQI---------- 2419
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVY 115
+TS +DRE Y+LV+ ++D + T V V V D NDN P F Y
Sbjct: 2420 --ITSALLDRETKDNYTLVVVSSDAGSPETLSSSTSVFVTVTDVNDNPPRFQHHPY 2473
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 112/276 (40%), Gaps = 46/276 (16%)
Query: 30 YSITQGND--NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+++T +D N A + + T K GVL V +DRE + Y+LV+ D+
Sbjct: 1966 FNVTDADDGINSQLAYSIASGDSLGQFTIDKDGVLKVLKA-LDRESQSFYNLVVQVHDLP 2024
Query: 88 GINKAE----THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV- 142
+ + V++ +LD NDN P F L+ +++ + + I +V
Sbjct: 2025 QLAASRFTSTAQVSIILLDVNDNPPAF---------------LSPKLTYIPENTPIDTVV 2069
Query: 143 ---SATDADG---DKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDL 194
ATD D + Y L P N I GE+ LTG+ ++V Y LTV A D
Sbjct: 2070 FKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDK 2129
Query: 195 QSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRID 251
PS + V + N+P+ ++A +++E T ++
Sbjct: 2130 GQPSLSSSTEVVVMVLDINDNNPIF------------AQALYKVEINENTLTGTDIIQVF 2177
Query: 252 FSETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
++ D G++ + + ++F+I ITV
Sbjct: 2178 AADGDEGTNGQVRYGIVGGNANQEFRIDSVTGAITV 2213
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 100/244 (40%), Gaps = 46/244 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+V S ++RE+ ++ + ++A D T VT+ V D NDN+P FS+ Y +L
Sbjct: 2829 IVISRPLNREDTDRFRIRVSAHDSGW--TVSTDVTIFVTDVNDNAPRFSRPSYYLDCPEL 2886
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELL------ 173
+ + S V+ VSATD D +V Y + S I TGE+
Sbjct: 2887 -TEIGSRVTQ---------VSATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILK 2936
Query: 174 ---LTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSE 230
++G ++ + V + D +PS + + ++D
Sbjct: 2937 YQNVSGFSNANINRHSFIVTSSDRGNPSLISETTVTI---------------NIVDSNDN 2981
Query: 231 APHRIEKRR---VTRAVR-PTKRIDFSETDGE---MEGRIVFALEKETEREKFKIRDENP 283
AP + + VT+ V+ TK I + D + + + + + E KFK+ ++
Sbjct: 2982 APQFLTIKYFTPVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFISNENHLGKFKLDNDTG 3041
Query: 284 WITV 287
WI+V
Sbjct: 3042 WISV 3045
>gi|344238297|gb|EGV94400.1| Protocadherin beta-6 [Cricetulus griseus]
Length = 2168
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 108/252 (42%), Gaps = 41/252 (16%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ I+ TD+ H +TV V D NDNSP F+Q Y V
Sbjct: 1779 ILMTEGALDRESRAEYNITISVTDLGTPRLTTQHTITVQVSDVNDNSPAFTQTSYTLFVQ 1838
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAY-----------KLAVPSNLVVIVPQT 169
+ NS H IG++SATD+D A+ +LA+ S+L+ I
Sbjct: 1839 E----NNSPALH------IGTISATDSDSGSNAHITYSLLPTHDPQLAL-SSLISINADN 1887
Query: 170 GELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQMI 225
G+L + ++ +E V A D SP+ ++ +V + N+P +L +
Sbjct: 1888 GQLFALRALDYEALQTFEFRVGATDQGSPALSSQALVRVLVLDANDNAPF-----VLYPL 1942
Query: 226 DRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWI 285
S + R TK + G+ + F L K TE F + W
Sbjct: 1943 QNASAPCTELLPRAAEPGYLVTKVVAVDRDSGQ-NAWLSFQLLKATEPGLFTV-----WA 1996
Query: 286 TVDENGDVRVKK 297
NG+VR +
Sbjct: 1997 ---HNGEVRTSR 2005
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 11/93 (11%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+T +DRE A+Y++ IT D+ + + + +VTV+V D NDN+P F+Q Y V +
Sbjct: 1504 LLTQKPLDRETTAEYNITITVVDMGSPMLRTQVNVTVEVSDVNDNAPAFTQTSYTLFVQE 1563
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDKVAY 154
NS H IG++SATD+D A+
Sbjct: 1564 ----NNSPALH------IGTISATDSDSGSNAH 1586
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 115/257 (44%), Gaps = 44/257 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE +Y++ IT TD+ H +TV V D NDN+P F+Q Y V +
Sbjct: 1184 LVTEMPLDRESHTEYNITITVTDLGTPRLTTQHTITVQVSDVNDNAPAFTQTSYTLFVQE 1243
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDKVAY-----------KLAVPSNLVVIVPQTG 170
NS H IG++SATD+D A+ +LA+ S+L+ I G
Sbjct: 1244 ----NNSPALH------IGTISATDSDSGSNAHITYSLLPTHDPQLAL-SSLISINADNG 1292
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQMID 226
+L + ++ +E V A D SP+ ++ +V + N+P +L +
Sbjct: 1293 QLFALRALDYEALQTFEFRVGATDQGSPALSSQALVRVLVLDANDNAPF-----VLYPLQ 1347
Query: 227 RKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWIT 286
+ P + V T + D + G+I ++L + ++ + K +P
Sbjct: 1348 NAVQIPEDSPIGSLITTVSATDK------DIGVNGQISYSLFQASD-DISKTFSTHPL-- 1398
Query: 287 VDENGDVRVKKRWDFEE 303
G+VR+K++ DFE+
Sbjct: 1399 ---TGEVRLKEQLDFEK 1412
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 54/105 (51%), Gaps = 13/105 (12%)
Query: 51 IRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPV 109
+R STE+ L T G +DRE A+Y++ IT D+ H +TV V D NDN+P
Sbjct: 378 LRPSTENF--YTLETDGALDRESRAEYNITITVNDLGTPRLTTQHTITVQVSDVNDNAPA 435
Query: 110 FSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAY 154
F+Q Y V + NS H IG++SATD+D A+
Sbjct: 436 FTQTSYTLFVQE----NNSPALH------IGTISATDSDSGSNAH 470
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 73/140 (52%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE+A+++L +TA D ++ T V + VLD NDNSP F Q +Y+
Sbjct: 975 LVLDQTLDREELAEFTLTLTALDGGSPPRSGTALVRILVLDINDNSPEFVQSLYK----- 1029
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVV----IVPQTGELLL 174
++S N+ V S + +VSA D D ++ Y + ++ I TG++ L
Sbjct: 1030 VQSYENTPVG-----SLVVAVSARDLDTGSYGQIVYAFFYATERILQTFQINSTTGKIYL 1084
Query: 175 TGDPPSDDVE-YELTVEAHD 193
G+ + ++ Y +T++A D
Sbjct: 1085 KGELNYEAIQSYSITIQAKD 1104
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 26/128 (20%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
LVR + NDN F L + ++N++ + +L S + + ++ L++ T
Sbjct: 531 LVRVLVLDANDNAPFVL-----YPLQNASAPCTELLPRASRQLSERDAPKHRLLLLHT-- 583
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+TV V D NDN+P F+Q Y V + NS H IG++SATD
Sbjct: 584 ---------ITVRVSDVNDNAPAFTQTSYTLFVQE----NNSPALH------IGTISATD 624
Query: 147 ADGDKVAY 154
+D A+
Sbjct: 625 SDSGSNAH 632
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 52 RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVF 110
RN ++ K LV +D EE AQ L +TA D ++ T + + VLD NDN+P F
Sbjct: 169 RNRSDGKKFPELVLDKALDHEEQAQLRLTLTALDGGSPPRSGTTEIQILVLDINDNTPEF 228
Query: 111 SQKVY 115
SQ++Y
Sbjct: 229 SQELY 233
>gi|308499150|ref|XP_003111761.1| hypothetical protein CRE_03081 [Caenorhabditis remanei]
gi|308239670|gb|EFO83622.1| hypothetical protein CRE_03081 [Caenorhabditis remanei]
Length = 581
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 90/195 (46%), Gaps = 43/195 (22%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV-K 87
R+ I QGN N+ F L T+ ++ ++ LV +G +DRE +Y L+I A D K
Sbjct: 153 RFVILQGNVNNVFKL---TSRKVNEQLQAD----LVVNGQLDREFRDKYELLIEAQDGGK 205
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ +++++D NDN+PVF++ Y +S+++NVS S I +V ATD
Sbjct: 206 PAKTGQLRCSIEIVDANDNAPVFTRSRY-------TASVSANVSIG---SHIITVQATDG 255
Query: 148 D---GDKVAY---KLAVPSNLVVIVPQTGELLLT------------------GDPP-SDD 182
D +++Y K + PSN + +G + T G+PP S
Sbjct: 256 DIGENSRISYEIKKTSSPSNSNFAISSSGVITTTATLLPASTHDVIVVASDHGNPPLSSS 315
Query: 183 VEYELTVEAHDLQSP 197
+TV L SP
Sbjct: 316 AVVTITVMGSTLASP 330
>gi|242397490|ref|NP_001156415.1| dachsous 1 precursor [Mus musculus]
Length = 3291
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+G +D E+ Y L + A D G ++ ++TV V D NDN P FSQ +Y+ ++
Sbjct: 2327 TGPLDFEQCDHYHLQLLAHD--GPHEGHANLTVLVEDVNDNVPTFSQSLYQVMM------ 2378
Query: 126 LNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDD 182
+ H S+I SVSATD D ++Y LA P+ + P G L T +
Sbjct: 2379 ----LEHTPPGSAILSVSATDRDSGANGHISYHLASPAEGFRVDPNNGTLFTTVGAMALG 2434
Query: 183 VE----YELTVEAHDLQSPSRYAREPAQVWLQ 210
E ++ +EA D +P R A+ V L+
Sbjct: 2435 HEGPGVVDVVLEARDHGAPGRTAQATVHVQLK 2466
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVIT 82
H V YSI GN F L+ P E+ + L LV +D E + QY+L +
Sbjct: 2508 HATVDYSIISGNRGRVFQLE-PRLAEVGDGVGPGPQALGCLVLLEPLDFESLTQYNLTVA 2566
Query: 83 ATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
A D + + VTV VLD NDN PVF++ YR V
Sbjct: 2567 AADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRVTV 2604
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 98/250 (39%), Gaps = 35/250 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHV--TVDVLDENDNSPVFSQKVYRFIVG 120
L T+ +DRE A Y+ +TA D T V T+ V D ND++P F R +
Sbjct: 1904 LSTATALDREHCASYAFSVTAVDGAAAGPLSTTVPITITVRDVNDHAPAFPTSPLRLRLP 1963
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA-VPSNLVVIVPQTGELLLTG 176
SLN K ++ ++ A D D + Y+LA P + TGE+ +
Sbjct: 1964 RPGPSLN------KPTLALATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVAR 2017
Query: 177 DP----PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
P P D V L + A DL P+R A V +Q + E+ + SEA
Sbjct: 2018 SPVALGPQDRV---LFIVATDLGRPARSATGVVVVGIQG-----EPERGPRFPRTSSEAV 2069
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGD 292
R T + P + G G I +++ ER F I+ IT
Sbjct: 2070 LRENAPPGTPVISPK-----AVHSGGSNGPITYSILSGNERGIFSIQPSTGAIT------ 2118
Query: 293 VRVKKRWDFE 302
VR + DFE
Sbjct: 2119 VRSAEGLDFE 2128
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 85/207 (41%), Gaps = 26/207 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V + P+ + YS+ Q +++ +P T E+
Sbjct: 1110 ENQPPGTSVGR--VFATDRDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEV---------- 1157
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
T +DRE+ + + L++ D ++ T V V VLD NDNSP F Q G
Sbjct: 1158 --TTLQTLDREQQSSFQLLVQVQDGGSPPRSATGTVHVAVLDLNDNSPTFLQ-ASGAAGG 1214
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGEL-----LL 174
L + V +++ + + + + Y L P S L + P TGEL L+
Sbjct: 1215 GLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFSLHPHTGELHTAASLV 1274
Query: 175 TGDPPSDDVEYELTVEAHDLQSPSRYA 201
+ P Y LT+ AHD SP R A
Sbjct: 1275 RAERP----HYVLTLSAHDQGSPPRSA 1297
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 22/138 (15%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LV ++++ G+ F L + SG L + S +D E AQ+ LV+ A
Sbjct: 2626 PHGLVHFTLSSGDPLGLFEL------------DENSGALRL-SRPLDCETQAQHQLVVQA 2672
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G + + VTV+V D ND+ P F + L +SL N +++ ++
Sbjct: 2673 ADPAGTHFSLVPVTVEVQDVNDHGPAFPLSL-------LSTSLAENQPPGTLVTTLHAID 2725
Query: 144 ATDADGDKVAYKL--AVP 159
++ Y L AVP
Sbjct: 2726 GDAGTFGRLRYSLLEAVP 2743
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 400 EGGEGH-FAL----------STQDSVIYLVCVARRLDREERDVYNLRVTATDSGSPPLRA 448
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + V D NDN+P F +++YR
Sbjct: 449 EAAFVLHVTDVNDNAPAFDRQLYR 472
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y + G D H F L + +G L V +DRE+ A++ L + A D
Sbjct: 1573 VSYRLAAGGDGH-FRL------------HATTGALSVVR-PLDREQRAEHVLTVVALDHG 1618
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIV 119
++ T + TV V+D ND +P F Q+ Y I+
Sbjct: 1619 SPPRSSTQLLTVSVVDVNDEAPAFPQQEYNVIL 1651
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGI-NKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +G++DRE + Y L + A D +A+ + V +LD ND++P F+Q Y +V +
Sbjct: 201 LVIAGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAVVSE 260
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDA 147
SL + F+S A A
Sbjct: 261 ---SLAPGSPVLQVFASDADAGANGA 283
>gi|57043471|ref|XP_544302.1| PREDICTED: protocadherin beta-7 [Canis lupus familiaris]
Length = 797
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 112/256 (43%), Gaps = 51/256 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT +D+ K + ++TV V D NDN+P FSQ Y V +
Sbjct: 403 LVTESPLDRESQAEYNITITVSDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IG+VSATD D +V Y L P ++LV I G+
Sbjct: 463 ----NNSPALH------IGTVSATDRDAGANAQVTYSLLPPRDPHLPLASLVSINADNGQ 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ-----L 221
L + ++ +E+ V A D SP+ ++ +V + N+P VL Q
Sbjct: 513 LFALRSLDYEALQAFEVRVGAADRGSPALSSQALVRVLVLDDNDNAPFVLYPLQNGSAPC 572
Query: 222 LQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDE 281
+++ R +EA + + K + + D + F L K TE F +
Sbjct: 573 TELVPRAAEAGYLVTK------------VVAVDGDSGQNAWLSFQLLKATEPGLFGV--- 617
Query: 282 NPWITVDENGDVRVKK 297
W NG+VR +
Sbjct: 618 --WA---HNGEVRTAR 628
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 76/153 (49%), Gaps = 19/153 (12%)
Query: 50 EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSP 108
++R+S E LV +DREEV++ SL +TA D ++ T + + VLD NDN P
Sbjct: 181 DVRDSGEGNVYPELVLDRVLDREEVSELSLTLTALDGGSPPRSGTTLIHILVLDVNDNVP 240
Query: 109 VFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVV- 164
F Q +YR V + NS V S + +V A D D ++ Y + ++ ++
Sbjct: 241 EFVQSLYRVQVPE-----NSPVG-----SLVVAVLARDLDAGSNGEIVYAFSYATDRILK 290
Query: 165 ---IVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
I +G+L L + + ++ Y LT++A D
Sbjct: 291 TFRINSTSGKLYLKAELNYEAIQTYTLTIQAKD 323
>gi|393909081|gb|EFO24955.2| hypothetical protein LOAG_03530 [Loa loa]
Length = 2371
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 15/109 (13%)
Query: 68 DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
++DREE +YS+ + A D G+ + T +T+ + D NDN+P F+ Y+F+V
Sbjct: 522 EVDREERNEYSIKVKAWD--GLWEVRTSLTITIQDINDNAPTFNDSFYKFLVA------- 572
Query: 128 SNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELL 173
+ + F+ IG + A D D +V Y L S+L +I P +G +
Sbjct: 573 ---ADLEIFAEIGRILAFDEDDGLNGQVRYDLRCDSDLFMIEPSSGRIF 618
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 17/112 (15%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD- 85
L+ Y I D F ++ PTT G++L T+G +D EE++ Y +I A D
Sbjct: 788 LLTYHIIYDTDRLPFTIE-PTT-----------GIIL-TTGYVDFEEISSYHFLIMAIDS 834
Query: 86 -VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKF 136
+N VT++VLDENDN P F ++ V S + + ++H F
Sbjct: 835 GFPALNDT-AEVTIEVLDENDNVPEFENHYVQYTVS-ANSPVGTAIAHLSAF 884
>gi|444713184|gb|ELW54092.1| Protocadherin beta-9 [Tupaia chinensis]
Length = 565
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 73/152 (48%), Gaps = 28/152 (18%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L T G +DRE Y++ IT TD+ K E ++T+ V D NDN+P F+Q Y +V
Sbjct: 402 ILTTEGALDRESQDVYNVTITVTDLGTPRLKTEHNITLLVSDVNDNAPAFTQASYTLLVR 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H IG++SATDAD +V Y L P ++LV I G
Sbjct: 462 E----NNSPALH------IGTISATDADAGTNAQVTYSLLPPHDPQLALASLVSINADNG 511
Query: 171 ELLLTGDPPSDDVE----YELTVEAHDLQSPS 198
+L S D E +E V A D SP+
Sbjct: 512 QLFALR---SLDYEALRAFEFGVRAADRGSPA 540
>gi|47212637|emb|CAF92949.1| unnamed protein product [Tetraodon nigroviridis]
Length = 255
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 16/108 (14%)
Query: 6 SGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVT 65
+ TG + ++ + P+ V YSIT GN + F S + SG++ V
Sbjct: 63 AATGSSVIQVVAEDADSKPNGAVSYSITSGNQGNQF------------SIDPASGIVRVN 110
Query: 66 SGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFS 111
D+DRE + YSL I+A D GI + T V VD+ D NDN+PVF+
Sbjct: 111 K-DLDREAIPSYSLAISARD-GGIPPLSSTTMVNVDISDVNDNAPVFA 156
>gi|61316276|ref|NP_001013026.1| protocadherin beta-3 precursor [Pan troglodytes]
gi|62510883|sp|Q5DRD1.1|PCDB3_PANTR RecName: Full=Protocadherin beta-3; Short=PCDH-beta-3; Flags:
Precursor
Length = 796
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV+ G +DRE ++Y++ IT TD+ K + ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVSEGALDRETRSEYNITITITDLGTPRLKTKYNITVLVSDVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P S+LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLSSLVSINADNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 LFALRSLDYEALQAFEFRVGATDRGSPA 540
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + SL +TA D ++ T + + VLD NDN+P F+Q +Y V
Sbjct: 194 LVLDKALDREEQPELSLTLTALDGGSPPRSGTAQINIQVLDINDNAPEFAQPLYEVAV-- 251
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + +S I +VSA+D D
Sbjct: 252 --------LENTPVYSVIVTVSASDLD 270
>gi|357625817|gb|EHJ76125.1| hypothetical protein KGM_06014 [Danaus plexippus]
Length = 2024
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 56/114 (49%), Gaps = 13/114 (11%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENSK GT VK + AS + V G+ + F++ T G
Sbjct: 844 VENSKKGTEVKMTNKIHASDNDMGQNAVFMYTLFGDGHDQFSVNEDT------------G 891
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKV 114
V+ +DREE QY L I A D KG K+E +T+ VLDENDNSP ++Q +
Sbjct: 892 VVFFIGNKLDREEKNQYLLKIVARD-KGSLKSEAKLTITVLDENDNSPKYNQII 944
>gi|8926619|gb|AAF81914.1|AF217757_1 protocadherin 3X [Homo sapiens]
gi|9965296|gb|AAG10030.1|AF282973_1 protocadherin-3x [Homo sapiens]
Length = 776
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ +T TD+ K E ++TV + D NDN+P F+Q Y V +
Sbjct: 403 LVTERALDREARAEYNITLTVTDMGTPRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 LFALRSLDYEALQAFEFRVGATDRGSPA 540
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 22/154 (14%)
Query: 49 HEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNS 107
HE R+ + LV ++DREE Q L +TA D ++ T V ++V+D NDN+
Sbjct: 183 HEFRDGRKYPE---LVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNA 239
Query: 108 PVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP----S 160
P F Q +Y+ + + NS + S + +VSA D DG K++Y L P S
Sbjct: 240 PEFEQPIYKVQIPE-----NSPLG-----SLVATVSARDLDGGANGKISYTLFQPSEDIS 289
Query: 161 NLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHD 193
+ + P TGE+ L + V YE+ ++A D
Sbjct: 290 KTLEVNPMTGEVRLRKQVDFEMVTSYEVRIKATD 323
>gi|23271279|gb|AAH36062.1| Protocadherin beta 16 [Homo sapiens]
gi|157928918|gb|ABW03744.1| protocadherin beta 16 [synthetic construct]
Length = 776
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ +T TD+ K E ++TV + D NDN+P F+Q Y V +
Sbjct: 403 LVTERALDREARAEYNITLTVTDMGTPRLKTEHNITVQISDVNDNAPTFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 LFALRSLDYEALQAFEFRVGATDRGSPA 540
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 22/154 (14%)
Query: 49 HEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNS 107
HE R+ + LV ++DREE Q L +TA D ++ T V ++V+D NDN+
Sbjct: 183 HEFRDGRKYPE---LVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNA 239
Query: 108 PVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP----S 160
P F Q +Y+ + + NS + S + +VSA D DG K++Y L P S
Sbjct: 240 PEFEQPIYKVQIPE-----NSPLG-----SLVATVSARDLDGGANGKISYTLFQPSEDIS 289
Query: 161 NLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHD 193
+ + P TGE+ L + V YE+ ++A D
Sbjct: 290 KTLEVNPMTGEVRLRKQVDFEMVTSYEVRIKATD 323
>gi|332234728|ref|XP_003266556.1| PREDICTED: protocadherin beta-13-like [Nomascus leucogenys]
Length = 801
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+T +DRE A+Y++ IT TD+ + K + ++TV V D NDN+P F+Q Y V +
Sbjct: 404 LLTERPLDRESRAEYNITITVTDLGTPMLKTQLNMTVLVADINDNAPAFTQTSYTLFVRE 463
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 464 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGH 513
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 514 LFALRSLDYEALQGFEFRVGASDRGSPA 541
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE A+ L +TA D ++ T V ++VLD NDN+P F Q YR
Sbjct: 195 LVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYR----- 249
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQ----TGELLL 174
++ S +S V + VSATD D +++Y L S+ + + TGE+ L
Sbjct: 250 VQISEDSPVGFL-----VVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDFLTGEIRL 304
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+ ++ YE+ +EA D
Sbjct: 305 KKQLDFEKLQSYEVNIEARD 324
>gi|148684875|gb|EDL16822.1| mCG19711 [Mus musculus]
Length = 3278
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+G +D E+ Y L + A D G ++ ++TV V D NDN P FSQ +Y+ ++
Sbjct: 2314 TGPLDFEQCDHYHLQLLAHD--GPHEGHANLTVLVEDVNDNVPTFSQSLYQVMM------ 2365
Query: 126 LNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDD 182
+ H S+I SVSATD D ++Y LA P+ + P G L T +
Sbjct: 2366 ----LEHTPPGSAILSVSATDRDSGANGHISYHLASPAEGFRVDPNNGTLFTTVGAMALG 2421
Query: 183 VE----YELTVEAHDLQSPSRYAREPAQVWLQ 210
E ++ +EA D +P R A+ V L+
Sbjct: 2422 HEGPGVVDVVLEARDHGAPGRTAQATVHVQLK 2453
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVIT 82
H V YSI GN F L+ P E+ + L LV +D E + QY+L +
Sbjct: 2495 HATVDYSIISGNRGRVFQLE-PRLAEVGDGVGPGPQALGCLVLLEPLDFESLTQYNLTVA 2553
Query: 83 ATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
A D + + VTV VLD NDN PVF++ YR V
Sbjct: 2554 AADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRVTV 2591
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 98/250 (39%), Gaps = 35/250 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHV--TVDVLDENDNSPVFSQKVYRFIVG 120
L T+ +DRE A Y+ +TA D T V T+ V D ND++P F R +
Sbjct: 1891 LSTATALDREHCASYAFSVTAVDGAAAGPLSTTVPITITVRDVNDHAPAFPTSPLRLRLP 1950
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA-VPSNLVVIVPQTGELLLTG 176
SLN K ++ ++ A D D + Y+LA P + TGE+ +
Sbjct: 1951 RPGPSLN------KPTLALATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVAR 2004
Query: 177 DP----PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
P P D V L + A DL P+R A V +Q + E+ + SEA
Sbjct: 2005 SPVALGPQDRV---LFIVATDLGRPARSATGVVVVGIQG-----EPERGPRFPRTSSEAV 2056
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGD 292
R T + P + G G I +++ ER F I+ IT
Sbjct: 2057 LRENAPPGTPVISPK-----AVHSGGSNGPITYSILSGNERGIFSIQPSTGAIT------ 2105
Query: 293 VRVKKRWDFE 302
VR + DFE
Sbjct: 2106 VRSAEGLDFE 2115
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 85/207 (41%), Gaps = 26/207 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V + P+ + YS+ Q +++ +P T E+
Sbjct: 1097 ENQPPGTSVGR--VFATDRDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEV---------- 1144
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
T +DRE+ + + L++ D ++ T V V VLD NDNSP F Q G
Sbjct: 1145 --TTLQTLDREQQSSFQLLVQVQDGGSPPRSATGTVHVAVLDLNDNSPTFLQ-ASGAAGG 1201
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGEL-----LL 174
L + V +++ + + + + Y L P S L + P TGEL L+
Sbjct: 1202 GLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGPGSELFSLHPHTGELHTAASLV 1261
Query: 175 TGDPPSDDVEYELTVEAHDLQSPSRYA 201
+ P Y LT+ AHD SP R A
Sbjct: 1262 RAERP----HYVLTLSAHDQGSPPRSA 1284
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 61/138 (44%), Gaps = 22/138 (15%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LV ++++ G+ F L + SG L + S +D E AQ+ LV+ A
Sbjct: 2613 PHGLVHFTLSSGDPLGLFEL------------DENSGALRL-SRPLDCETQAQHQLVVQA 2659
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G + + VTV+V D ND+ P F + L +SL N +++ ++
Sbjct: 2660 ADPAGTHFSLVPVTVEVQDVNDHGPAFPLSL-------LSTSLAENQPPGTLVTTLHAID 2712
Query: 144 ATDADGDKVAYKL--AVP 159
++ Y L AVP
Sbjct: 2713 GDAGTFGRLRYSLLEAVP 2730
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 387 EGGEGH-FAL----------STQDSVIYLVCVARRLDREERDVYNLRVTATDSGSPPLRA 435
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + V D NDN+P F +++YR
Sbjct: 436 EAAFVLHVTDVNDNAPAFDRQLYR 459
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 15/93 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y + G D H F L + +G L V +DRE+ A++ L + A D
Sbjct: 1560 VSYRLAAGGDGH-FRL------------HATTGALSVVR-PLDREQRAEHVLTVVALDHG 1605
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIV 119
++ T + TV V+D ND +P F Q+ Y I+
Sbjct: 1606 SPPRSSTQLLTVSVVDVNDEAPAFPQQEYNVIL 1638
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGI-NKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +G++DRE + Y L + A D +A+ + V +LD ND++P F+Q Y +V +
Sbjct: 188 LVIAGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAVVSE 247
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDA 147
SL + F+S A A
Sbjct: 248 ---SLAPGSPVLQVFASDADAGANGA 270
>gi|66773260|ref|NP_001019347.1| protocadherin 2 gamma 3 precursor [Danio rerio]
gi|51557469|gb|AAU06420.1| protocadherin cluster 2 gamma 3 [Danio rerio]
Length = 935
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 64/119 (53%), Gaps = 16/119 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G++DRE +++Y++ ITATD + T ++ + V D NDN PVF Q+ YR V +
Sbjct: 392 LVTTGELDRELLSEYNITITATDEGSPPLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 451
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGD 177
+ K SSI SVSATD D V Y L S+ V P + L + GD
Sbjct: 452 ----------NNKAGSSICSVSATDPDWRQNGTVVYSLL--SSDVSGAPVSSFLSINGD 498
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 32/177 (18%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
RYS+ Q NDN A I + + + L+ ++DRE+ + +L++TA D
Sbjct: 157 RYSL-QKNDNFQLA--------INSDVHGEKSLELLLEKELDREQQKEVTLILTAVDGGT 207
Query: 89 INKAET---HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
++ T HVTV LD NDN+PVFSQ VY+ + + NS V + + +VSAT
Sbjct: 208 PPRSGTVAIHVTV--LDANDNAPVFSQAVYKVSLPE-----NSPVD-----TVVVTVSAT 255
Query: 146 DAD---GDKVAYKLAVPSN----LVVIVPQTGELLLTGDPP-SDDVEYELTVEAHDL 194
DAD +V Y + S+ + + TG++ + G D+ YEL VE D+
Sbjct: 256 DADEGQNGEVTYAFSRISDKARKMFSLDKNTGDIRIAGALDFEDEAVYELRVEGKDV 312
>gi|432951772|ref|XP_004084898.1| PREDICTED: protocadherin gamma-A12-like, partial [Oryzias latipes]
Length = 512
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 97/197 (49%), Gaps = 40/197 (20%)
Query: 11 KGLPILVASSHKH---PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSG 67
KG L+ +H + + RY++ Q NDN A+ N + V LV
Sbjct: 148 KGNRFLIQEAHDADIGQNAVQRYTL-QKNDNFILAVGN-------------NKVELVLEN 193
Query: 68 DIDREEVAQYSLVITATDVKGINKAET---HVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
+DRE+ + +L++TA D ++ T HVTV LD NDN+PVFSQ VY K+
Sbjct: 194 TLDREKQSDMNLLLTAVDGGSPQRSGTVIIHVTV--LDANDNAPVFSQNVY-------KT 244
Query: 125 SLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSN----LVVIVPQTGELLLTGD 177
+L N + + +VSATDAD V Y+ S+ + +I ++GE+ LTG
Sbjct: 245 TLPEN---SPPETLVITVSATDADEGVNADVTYQFGHVSDDDVHVFLIDQKSGEIRLTGL 301
Query: 178 PPSDDV-EYELTVEAHD 193
+++ +E+ VEA D
Sbjct: 302 IDYEEITSFEIRVEAKD 318
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+V++G +DRE V+ Y++ I+ATD ++ ++T V + V D NDN PVF ++ Y V
Sbjct: 399 VVSTGQLDRELVSDYNITISATDEGSPPLSSSKT-VHLSVADINDNPPVFEEQSYSAYVS 457
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + + S++ SVSA D D
Sbjct: 458 E----------NNQAGSTLCSVSARDPD 475
>gi|410951053|ref|XP_003982216.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3 [Felis
catus]
Length = 3316
Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 489 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 547
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 548 KRY---VAQVREDV-------RPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDS 597
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 598 LTGEIQVVA--PLDFEAEREYALRIRAQDAGRP 628
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 79/280 (28%), Positives = 115/280 (41%), Gaps = 53/280 (18%)
Query: 42 ALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDV 100
AL N + E+ S + SG L+ T +DRE + ++ L +TA D A T V V V
Sbjct: 366 ALMNSRSLELF-SIDPLSG-LIRTEAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTV 423
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLA 157
D ND++PVF Q YR +L NV ++ I + ATD D A Y+
Sbjct: 424 TDRNDHAPVFEQAQYR-------ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFV 473
Query: 158 VPSNLVV-------IVPQTGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVW 208
P I P++G + +G + +E YEL VEA D Q P P
Sbjct: 474 GPPAARAAAAAAFEIDPRSGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSAT 528
Query: 209 LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGR 262
++ + VL D AP EKR V + VRP R+ ++ D + G
Sbjct: 529 VRVHITVL---------DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGL 579
Query: 263 IVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ + + R F I G+++V DFE
Sbjct: 580 VHYNIISGNSRGHFAID--------SLTGEIQVVAPLDFE 611
Score = 42.4 bits (98), Expect = 0.31, Method: Composition-based stats.
Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 30/179 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 1078 ENSIVGSVVA--QITAVDPDEGPNAHIMYQIVEGNIPELFQM------------DIFSGE 1123
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIV 119
L D+D E +Y +V+ AT +++A HV + +D+NDNSPV + Q ++ V
Sbjct: 1124 LTALI-DLDYEARQEYVIVVQATSAPLVSRATVHVRL--VDQNDNSPVLNNFQILFNNYV 1180
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
+ + S V IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1181 SNRSDTFPSGV--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1231
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 565 LRVTATDRDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVVA-PLDFE 611
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y+L I A D ++ ++ V+D ND++P+F ++ V + + L +V
Sbjct: 612 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLE-NAPLGHSV 670
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKLA--VPSNLVVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L P VI TG + ++G + VE Y
Sbjct: 671 IH------IQAVDADHGENARLEYSLTGVAPDMPFVINSATGWVSVSGPLDRESVEHYFF 724
Query: 188 TVEAHDLQSP 197
VEA D +P
Sbjct: 725 GVEARDHGTP 734
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLK 123
SG +DRE V Y + A D G A VTV VLD NDN P F+ K Y
Sbjct: 711 SGPLDRESVEHYFFGVEARD-HGTPPLSASASVTVTVLDVNDNRPEFTMKEYHL------ 763
Query: 124 SSLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPS 180
LN + + +++ SV+A D D + ++Y++ N I Q G L+T P
Sbjct: 764 -RLNEDAA---VGTTVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPL 819
Query: 181 D---DVEYELTVEAHD 193
D + ++L + A D
Sbjct: 820 DYKQERYFKLVLTASD 835
Score = 38.9 bits (89), Expect = 3.0, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 86/218 (39%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 981 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1028
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V Y L A D +G+ T V++ V D NDN+PVF + + V + NS V
Sbjct: 1029 AVPVYELTAYAVD-RGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1082
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1083 G-----SVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1137
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 1138 YVIVVQATSAPLVSRATVHVRLVDQNDNSPVLNNFQIL 1175
Score = 38.1 bits (87), Expect = 5.7, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+D E+ Y+L ITA D KA+T +V V V D NDN+P F Y +V +
Sbjct: 919 LDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSE------ 972
Query: 128 SNVSHWKKFSSIGSVSATDADG 149
F+S+ +SATD D
Sbjct: 973 ----DAPPFTSVLQISATDRDA 990
>gi|291393635|ref|XP_002713434.1| PREDICTED: anchor protein-like [Oryctolagus cuniculus]
Length = 3307
Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 486 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 544
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 545 KRY---VAQVREDV-------RPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDS 594
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 595 LTGEIQVVA--PLDFEAEREYALRIRAQDAGRP 625
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 78/280 (27%), Positives = 117/280 (41%), Gaps = 53/280 (18%)
Query: 42 ALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDV 100
AL N + E+ S + ++G L+ T+ +DRE + ++ L +TA D A T V V V
Sbjct: 363 ALMNSRSLELF-SIDPQTG-LIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTV 420
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLA 157
D ND++PVF Q YR +L NV ++ I + ATD D A Y+
Sbjct: 421 ADRNDHAPVFEQAQYR-------ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFV 470
Query: 158 VPSNLVV-------IVPQTGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVW 208
P I P++G + +G + +E YEL VEA D Q P P
Sbjct: 471 GPPAARTAAAAAFEIDPRSGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSAT 525
Query: 209 LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGR 262
++ + VL D AP EKR V + VRP R+ ++ D + G
Sbjct: 526 VRVHITVL---------DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGL 576
Query: 263 IVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ + + R F I G+++V DFE
Sbjct: 577 VHYNIISGNSRGHFAID--------SLTGEIQVVAPLDFE 608
Score = 42.4 bits (98), Expect = 0.32, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 562 LRVTATDRDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVVA-PLDFE 608
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y+L I A D ++ ++ V+D ND++P+F ++ V + + L +V
Sbjct: 609 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSVLE-NAPLGHSV 667
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKLA--VPSNLVVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L P VI TG + ++G + VE Y
Sbjct: 668 IH------IQAVDADHGENARLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYFF 721
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 722 GVEARDHGSP 731
Score = 41.6 bits (96), Expect = 0.46, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 15/113 (13%)
Query: 68 DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIVGDLKSS 125
D+D E +Y +V+ AT +++A HV + +D+NDNSPV + Q ++ V + +
Sbjct: 1126 DLDYEARQEYVIVVQATSAPLVSRATVHVRL--VDQNDNSPVLNNFQILFNNYVSNRSDT 1183
Query: 126 LNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
S V IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1184 FPSGV--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1228
Score = 41.2 bits (95), Expect = 0.62, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y
Sbjct: 708 SGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHL------- 760
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
LN + + +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 761 RLNEDAA---VGTSVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLD 817
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 818 YKQERYFKLVLTASD 832
Score = 38.9 bits (89), Expect = 3.4, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 86/218 (39%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 978 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1025
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V Y L A D +G+ T V++ V D NDN+PVF + + V + NS V
Sbjct: 1026 AVPVYELTAYAVD-RGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1079
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1080 G-----SVVAQITAVDPDEGPNAHIMYQIVDGNIPELFQMDIFSGELTALIDLDYEARQE 1134
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 1135 YVIVVQATSAPLVSRATVHVRLVDQNDNSPVLNNFQIL 1172
Score = 38.1 bits (87), Expect = 5.7, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+D E+ Y+L ITA D KA+T +V V V D NDN+P F Y +V +
Sbjct: 916 LDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSE------ 969
Query: 128 SNVSHWKKFSSIGSVSATDADG 149
F+S+ +SATD D
Sbjct: 970 ----DAPPFTSVLQISATDRDA 987
>gi|291387668|ref|XP_002710368.1| PREDICTED: FAT tumor suppressor 2 [Oryctolagus cuniculus]
Length = 4349
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 96/205 (46%), Gaps = 23/205 (11%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y + +GN + F++ S SG L+ T ++D E+++ Y L I +++
Sbjct: 1690 VTYELREGNKDGVFSMN------------SYSG-LISTKKNLDHEKISSYQLKIRGSNMA 1736
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G T V V V+DENDN+PVFS+ + V + + L S + + S D
Sbjct: 1737 GAFTDVT-VLVYVIDENDNAPVFSKSTFVGQVSE-AAPLYSMIMDEDNNPFVIHASDNDK 1794
Query: 148 DGDK-VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPSRYARE 203
+G+ + YK+ P L I P G L + + + ++ +V HD SP +A +
Sbjct: 1795 EGNSLLVYKILEPEALKFFKIDPSMGTLTTVSEMDYESMPSFQFSVYVHDQGSPILFAPK 1854
Query: 204 PAQVWLQF----NSPVLQDEQLLQM 224
PA+V + +SP EQ+ ++
Sbjct: 1855 PAKVIINVRDVNDSPPRFSEQIYEV 1879
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 97/199 (48%), Gaps = 31/199 (15%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS+ G V L L A + Q+ Y IT+G+ F + +E R S++
Sbjct: 2918 VENSEPGELVATLETLDADVSEQNRQVTCY-ITEGDPLGQFGISQ-VGNEWRISSKKI-- 2973
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+DRE +A+Y L ITA+D G +A V + VLD NDNSP SQ +Y G
Sbjct: 2974 --------LDREHLAKYLLRITASD--GKFQASVPVEIFVLDINDNSPQCSQLLY---TG 3020
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-SNLVVIVPQTGEL-LLT 175
++ +++ H+ I VSATD D D ++ Y L P +N + P TGEL T
Sbjct: 3021 RVRE--DASPGHF-----ILKVSATDLDTDTNAQITYSLHGPGANEFKLDPHTGELTTFT 3073
Query: 176 G-DPPSDDVEYELTVEAHD 193
G D D+ Y L +A D
Sbjct: 3074 GLDRERKDI-YSLVAKATD 3091
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 71/160 (44%), Gaps = 24/160 (15%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLV 80
P VRY I G+ + F + +R T+S + LL +RE Y+L+
Sbjct: 65 PQWTVRYRIISGDVANVFKTEEYVVGNFCFLRIRTKSSNTALL------NREVRDSYTLI 118
Query: 81 ITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF-IVGDLKSSLNSNVSHWKKFSSI 139
I AT+ +A HV + +LD+ND P+FS YR I GD+ S I
Sbjct: 119 IQATEKTLELEALAHVVIHILDQNDLKPLFSPPSYRVTISGDVPLR-----------SPI 167
Query: 140 GSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTG 176
V+ATDAD + A Y S + I P +G + + G
Sbjct: 168 CKVTATDADLGQNAEFYYAFNTRSEMFAIHPTSGVVTVAG 207
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 101/209 (48%), Gaps = 38/209 (18%)
Query: 26 QLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
++VR +T N + LK P++ + +++G L+ T+ +D + A Y L + T
Sbjct: 380 RVVRVKVTPAFPNLQYTLK-PSSVSAGFTLNARTG-LITTTRFLDFRDGAHYQLHVRTT- 436
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G+ A T V +D++D N+++PVF++ Y + +L+ NV +SI +V+AT
Sbjct: 437 -PGL--ASTTVVIDIVDCNNHAPVFNRSSY-------EGTLDENV---PPGTSILAVTAT 483
Query: 146 DADGDK---VAYKLAVPSNL-VVIVPQTGELLLTGDPPSDDVEYELT-------VEAHDL 194
D D + V Y +A P + I P G ++ T P ++YEL V A D
Sbjct: 484 DGDRGENGFVTYSIAGPKGVPFSINPYLG-IISTSKP----MDYELMRRMYTFRVRASDW 538
Query: 195 QSPSRYAREPAQVWLQF-----NSPVLQD 218
SP R +E V L+ N P+ +D
Sbjct: 539 GSPFRREKE-VSVSLRLQNLNDNQPMFED 566
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 75/168 (44%), Gaps = 26/168 (15%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN+ F + E ++G+ V + +D E + Y L IT D+
Sbjct: 752 YVIADGNEEGCFDI------------ELETGLFSVVA-PLDYETTSFYILNITVHDLGTP 798
Query: 90 NKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K+ + V+V D NDN+P RF G + +++ + + + + A D
Sbjct: 799 QKSSWKLLPVNVKDWNDNAP-------RFPAGGYQLTISEDTEVGTTIAELQTKDADSED 851
Query: 149 GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHD 193
+V Y L P+ + P TGEL++TG P D + ++ L VEA D
Sbjct: 852 NGRVRYSLLTPTEKFSLHPLTGELVVTG--PLDRESEPQHILKVEARD 897
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 18/89 (20%)
Query: 62 LLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQK------- 113
LL T+ +DRE ++ L +T D + K+ + V V VLD NDN PVFS K
Sbjct: 1193 LLTTAKQLDRENKEEHILEVTVLDHGEPALKSTSRVVVRVLDVNDNPPVFSHKLFNVRLP 1252
Query: 114 ----------VYRFIVGDLKSSLNSNVSH 132
VYR + DL LN +++
Sbjct: 1253 ERLSPTSPGPVYRLVASDLDDGLNGRITY 1281
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
+T+ K+GVL VT G +D E ++ + ATD + +E V V V D NDN P FSQ
Sbjct: 2217 TTDFKTGVLTVT-GPLDYESKTKHVFTVRATDTALGSFSEATVEVVVEDINDNPPTFSQL 2275
Query: 114 VY 115
VY
Sbjct: 2276 VY 2277
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 33 TQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA 92
T N T++L P +E + + +G L +G +DRE YSLV ATD G
Sbjct: 3042 TDTNAQITYSLHGPGANEFK--LDPHTGELTTFTG-LDRERKDIYSLVAKATDGGG-RSC 3097
Query: 93 ETHVTVDVLDENDNSPVF 110
+ VT+ V D NDN+P F
Sbjct: 3098 QADVTLHVEDVNDNAPRF 3115
>gi|18087783|ref|NP_444365.1| protocadherin beta 10 precursor [Mus musculus]
gi|14039451|gb|AAK53228.1|AF326303_1 protocadherin-betaJ [Mus musculus]
gi|13876280|gb|AAK26060.1| protocadherin beta 10 [Mus musculus]
gi|148678214|gb|EDL10161.1| protocadherin beta 10 [Mus musculus]
Length = 797
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 104/250 (41%), Gaps = 39/250 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ I+ TD+ H +TV V D NDN+P F++ Y + +
Sbjct: 402 LVTEGTLDRESKAEYNITISVTDLGTPRLTTQHTITVQVSDINDNAPTFTRTSYTMFIRE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVP-------SNLVVIVPQTGE 171
NS H IG++SATD+D + Y L P ++LV I G+
Sbjct: 462 ----NNSPALH------IGTISATDSDAGSNAHITYSLLPPHDPQLTLTSLVSINEDNGQ 511
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQD---EQLLQMIDR 227
L + + +E V A D SP+ ++ V VL D E + +
Sbjct: 512 LFALRALDYEALRAFEFHVRATDRGSPALSSQALVLVV------VLDDNDNEPFVLYPLQ 565
Query: 228 KSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
S AP + R A ++ + D + F L K TE F + W
Sbjct: 566 NSSAPCKELVPRAAEAGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFSV-----WA-- 618
Query: 288 DENGDVRVKK 297
NG+VR +
Sbjct: 619 -HNGEVRTTR 627
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 17/121 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + +L++TA D ++ T V ++V+D NDN+P F Q +Y + +
Sbjct: 194 LVLDRALDREEQPELTLILTALDGGAPPRSGTTEVHIEVVDINDNAPQFIQSLYEVQILE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNL---VVIVPQTGELLLT 175
S L++ V+ +VSA D D KVAY L + VI TGE+ L
Sbjct: 254 -NSPLDALVA---------TVSARDLDAGIYGKVAYSLFQDDGISQPFVIDEITGEIRLK 303
Query: 176 G 176
G
Sbjct: 304 G 304
>gi|426345436|ref|XP_004040420.1| PREDICTED: protocadherin Fat 4 [Gorilla gorilla gorilla]
Length = 4981
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 84/185 (45%), Gaps = 40/185 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+ YSI +GN+ FA+ +S SG V L+ G +D E YSLVI A D
Sbjct: 1244 LIHYSIIKGNEERQFAI------------DSTSGQVALI--GKLDYEATPAYSLVIQAVD 1289
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
I T + +D+LDENDN+P F KS+L +V + + SV+
Sbjct: 1290 SGTIPLNSTCTLNIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVT 1338
Query: 144 ATDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
ATD+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1339 ATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQ 1395
Query: 195 QSPSR 199
P R
Sbjct: 1396 GRPPR 1400
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 35/193 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L++YSI+ GN+ FA+ S +G+L + +D E ++ + I+A D
Sbjct: 3123 LIKYSISSGNEEGIFAIN------------SSTGILTLAKA-LDYELCQKHEMTISAIDG 3169
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + VTV+V+D NDNSPVF Y V + + +++ ++AT
Sbjct: 3170 GWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTV----------LENAPSGTTVIHLNAT 3219
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
DAD +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 3220 DADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQG---FLDFETKQSYHLTVKAFNVPDE 3276
Query: 198 SRYAREPAQVWLQ 210
R + V L+
Sbjct: 3277 ERCSFATVNVQLK 3289
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V+YSI+ G+ + R ++SGV+ T +DREE Y L + ATD
Sbjct: 724 VKYSISAGDRS-------------RFQVNAQSGVI-STRMALDREEKTAYQLQVVATDGG 769
Query: 88 GINKA-ETHVTVDVLDENDNSPVFSQKVYRFI----------VGDLKSS---LNSNVSHW 133
+ + VT+ VLD DN PVFSQ Y F+ VG + +S LNSN+S+
Sbjct: 770 NLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFENVALGYHVGSVSASTMDLNSNISYL 829
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ Y+L + ATD KG + T V V VLD NDN+P+F+Q +Y+
Sbjct: 2109 TGELDREEVSNYTLTVVATD-KGQPSLSSSTEVVVMVLDINDNNPIFAQALYK 2160
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 99/258 (38%), Gaps = 44/258 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ T L T+ IDREE + Y L + A+
Sbjct: 826 ISYLITTGDQKGMFAINQVTGQ-------------LTTANVIDREEQSFYQLKVVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V D NDNSP F Q + S+N V +W+ SI A D
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAI---------ESVNV-VENWQAGHSIFQAKAVDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYARE 203
D V Y L P NL I + G + L G Y++ + A D+ P +
Sbjct: 921 DEGVNGMVLYSLKQNPKNLFAINEKNGTISLLGPLDVHAGSYQIEILASDMGVPQLSSSV 980
Query: 204 PAQVWLQ---FNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEME 260
V++ NSPV +QL + P + R ++ S+ D
Sbjct: 981 ILTVYVHDVNDNSPVF--DQLSYEVTLSESEP--VNSRFF--------KVQASDKDSGAN 1028
Query: 261 GRIVFALEKETEREKFKI 278
G I + + + + F I
Sbjct: 1029 GEIAYTIAEGNTGDAFGI 1046
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 82/194 (42%), Gaps = 38/194 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I +GN+ F L N + + + LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIIRGNEAGRFRLD-----ITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KGE 227
Query: 90 NKAETH--VTVDVLDENDNSPVFSQKVYR------FIVGDLKSSLNSNVSHWKKFSSIGS 141
K + V V V D NDN PVF Y+ +VG SS+
Sbjct: 228 PKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVG----------------SSVLQ 271
Query: 142 VSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQ 195
V+A DAD + Y+L + P+TG L+T P D +Y LTV+A D
Sbjct: 272 VAAADADEGTNADIRYRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTVQAMDRG 329
Query: 196 SPSRYAREPAQVWL 209
PS R A + L
Sbjct: 330 VPSLTGRAEALIQL 343
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 31/176 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN ++F++ N T EIR+ +DRE+V+ Y L I +
Sbjct: 2699 PNGQLDYEIVNGNMENSFSI-NHATGEIRSVRP------------LDREKVSHYVLTIKS 2745
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D KG T V V ++LDENDN+P FSQ ++ V + NS + + ++
Sbjct: 2746 SD-KGSPSQSTSVKVMINILDENDNAPRFSQ-IFSAHVPE-----NSPLGY-----TVTR 2793
Query: 142 VSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ +D D A Y + S I P TG+++++ +D + Y + V AHD
Sbjct: 2794 VTTSDEDIGINAISRYSIMDASLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2849
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1754 GDGSKIMQLTAMDADEGANALVTYTIISGADD-SFRI------------DPESGDLIATR 1800
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND++P FS+ VY F
Sbjct: 1801 -RLDRERRSKYSLLVRADD--GLQSSDMRINITVSDVNDHTPKFSRHVYSF 1848
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + + A + + VRY I GN N F + +S +G
Sbjct: 2165 ENTLTGTDI--IQVFAADGDEGTNGQVRYGIVNGNTNQEFRI------------DSVTGA 2210
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
+ V +DRE+ Y L + ATD + +T V++ +LD ND PVF Y
Sbjct: 2211 ITVAK-PLDREKTPTYHLTVQATDRGSTPRTDTSMVSIVLLDINDFVPVFEPSPY 2264
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 19/91 (20%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGD 121
L T +DREE A YSL++ ATD+ ++ + V +LD NDNSPVF Y
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQY------ 694
Query: 122 LKSSLNSNVSHWKK----FSSIGSVSATDAD 148
+H K+ S I +VSATD D
Sbjct: 695 --------FAHIKENEPGGSYITTVSATDPD 717
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 83/177 (46%), Gaps = 35/177 (19%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKV 114
K+G + V SG +DRE+ + SL + A + ++G + E V V VLD ND PVF+ +
Sbjct: 3351 KTGQIYV-SGILDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND-PPVFTLNI 3408
Query: 115 YRFIVGD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLV 163
Y + + S+ +S+ + W +FS IGS G++ +
Sbjct: 3409 YSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGS-------GNE--------NGTF 3453
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
I PQTG++ +T + + + Y L+V A D +PS V L+ N P+L
Sbjct: 3454 SINPQTGQITVTAELDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 103/249 (41%), Gaps = 44/249 (17%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE----THVTVDVLDENDNSPVF 110
T K+GVL V +DRE + Y+LV+ D+ I + V++ +LD NDN P F
Sbjct: 1993 TVDKNGVLKVLKA-LDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTF 2051
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV----SATDADG---DKVAYKLAVP-SNL 162
L+ +++ + + I +V ATD D + Y L P N
Sbjct: 2052 ---------------LSPKLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNK 2096
Query: 163 VVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQD 218
I GE+ LTG+ ++V Y LTV A D PS + V + N+P+
Sbjct: 2097 FSIGTIDGEVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIF-- 2154
Query: 219 EQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKI 278
++A +++E T ++ ++ D G++ + + ++F+I
Sbjct: 2155 ----------AQALYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVNGNTNQEFRI 2204
Query: 279 RDENPWITV 287
ITV
Sbjct: 2205 DSVTGAITV 2213
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 118/299 (39%), Gaps = 55/299 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN++ GT V L + A S + + I GN+ F E+++S +
Sbjct: 369 ENAQVGTVVALLTVTDADS-PAANGNISVQILGGNEQRHF--------EVQSSKVPNLSL 419
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGI--------NKAETHVTVDVLDENDNSPVFSQK 113
+ V S +DRE + Y+L ++ +D G + + + V D ND+ PVFSQ+
Sbjct: 420 IKVASA-LDRERIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPVFSQQ 478
Query: 114 VYRFIVGDLKSSLNSNVS-HWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVI-VPQ 168
VYR N+S S + +SATD D + Y + + L + +
Sbjct: 479 VYRV-----------NLSEEAPPGSYVSGISATDGDSGLNANLRYSIVSGNGLGWFHISE 527
Query: 169 TGELLLTGDPPSDDVEYE----LTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQM 224
L+ TG D E L + A D P + Q LL +
Sbjct: 528 HSGLVTTGSSGGLDRELASQIVLNISARD------QGVHPKVSYAQLVV------TLLDV 575
Query: 225 IDRKS--EAPHRIEKRRVTRAVRPTKRIDFSETDGEM--EGRIVFAL-EKETEREKFKI 278
D K P + V A T+ + TDG++ G + F+L E ET+R F++
Sbjct: 576 NDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGDLGDNGTVRFSLQEAETDRRSFRL 634
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 108/275 (39%), Gaps = 47/275 (17%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ + RYSI + T NP+T +I V S ++RE+ +Y + ++A
Sbjct: 2804 NAISRYSIMDASLPFTI---NPSTGDI------------VISRPLNREDTDRYRIRVSAH 2848
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
D T VT+ V D NDN+P FS+ Y +L + S + V A
Sbjct: 2849 DSGW--TVSTDVTIFVTDINDNAPRFSRTSYYLDCPELT----------ETGSKVTQVFA 2896
Query: 145 TDAD---GDKVAYKLAVPSNLVVIVPQTGELL---------LTGDPPSDDVEYELTVEAH 192
TD D +V Y + S I TGE+ +TG + + V +
Sbjct: 2897 TDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQNVTGFSNVNINRHSFIVTSS 2956
Query: 193 DLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDF 252
D PS + + + V ++ Q + K P + T+ +R T ID
Sbjct: 2957 DRGKPSLISETTVTINI-----VDSNDNAPQFLKSKYFTPVTKNVKVGTKLIRVTA-ID- 3009
Query: 253 SETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
+ D + + + + + KFK+ ++ WI+V
Sbjct: 3010 -DKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISV 3043
>gi|62740236|gb|AAH94239.1| Pcdhb22 protein [Mus musculus]
Length = 537
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 13/94 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIVG 120
LVT G +DRE A+Y++ I+ TD+ GI K T +TV V D NDN+P F+Q Y +V
Sbjct: 144 LVTDGALDREIRAEYNITISVTDL-GIPKLTTQHTITVQVSDINDNAPAFTQVSYTMLVH 202
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAY 154
+ NS H IG++SATD+D A+
Sbjct: 203 E----NNSPALH------IGTISATDSDSGSNAH 226
>gi|380801657|gb|AFE72704.1| protocadherin beta-15 precursor, partial [Macaca mulatta]
Length = 531
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 55/102 (53%), Gaps = 15/102 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE AQY++ IT TD+ K E +TV V D NDN+P F++ Y V +
Sbjct: 179 LVTEGALDRENRAQYNITITITDLGTPRLKTEHCITVLVSDVNDNAPAFTRTSYTLFVRE 238
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPS 160
NS H IGSVSATD D +V Y L +PS
Sbjct: 239 ----NNSPALH------IGSVSATDRDSGTNAQVTYSL-LPS 269
>gi|410914515|ref|XP_003970733.1| PREDICTED: protocadherin Fat 4-like [Takifugu rubripes]
Length = 5463
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 90/179 (50%), Gaps = 37/179 (20%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y+I GN +++F++ N T EIR T+ +DRE+VAQY L + A
Sbjct: 3167 PNGQLEYAIVDGNKDNSFSI-NRATGEIR------------TTRPLDREKVAQYGLKVKA 3213
Query: 84 TDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
TD +G+ V ++VLD NDN+P FS K++ V + N+ + ++
Sbjct: 3214 TD-RGLPQKNMAVRVLINVLDVNDNAPRFS-KIFSATVAE-----NAPAGY-----TVTR 3261
Query: 142 VSATDADGDKVA---YKLA---VPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ TD D A Y +A +P N I P TG++ ++ +D + Y + V AHD
Sbjct: 3262 VTTTDEDAGSNAVSRYSIADTGLPFN---INPSTGDITVSRPLNREDTDHYIVKVSAHD 3317
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 91/191 (47%), Gaps = 31/191 (16%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
++ Y+IT GND F++ S+SGVL + +D EE Q++L ++ATD
Sbjct: 3591 VITYNITSGNDRGLFSIN------------SRSGVLALAQ-PLDFEEKQQHNLRVSATDG 3637
Query: 87 KGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
I+K VTV V D NDN PVF Y +V NV +++ ++AT
Sbjct: 3638 GWISKTSYVSVTVHVTDVNDNPPVFEPDEYFPVV-------QENVPSG---TTVVKMTAT 3687
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSPSR 199
D D +AY + + S+L VI P TG + G D + V Y LTV+A ++ R
Sbjct: 3688 DGDSGANAVMAYVIQSSDSDLFVIDPNTGTITTQGFLDYEAKQV-YHLTVKAFNVPDEER 3746
Query: 200 YAREPAQVWLQ 210
+ + L+
Sbjct: 3747 CSFANVNIQLK 3757
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 107/267 (40%), Gaps = 47/267 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V+Y IT G D F + N K G L+ +DREE Y L + A D
Sbjct: 1193 VKYMITAG-DTVKFHI---------NGNTGKIGTLV----PLDREEKTTYQLQVAAADGG 1238
Query: 88 GI-NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
G+ + + VTV V+D DN PVFSQKVY F++ + N V + IG+VSAT
Sbjct: 1239 GLRSHTQAIVTVTVIDTQDNPPVFSQKVYSFVMFE-----NVGVG-----TVIGTVSATT 1288
Query: 147 ADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQ 206
D + L + + G +T D E H L+ +R +
Sbjct: 1289 VDLNTNISYLITSGDQRGLFGVNGAGQITASSQVDREEQSF----HQLKVVARAGEITGE 1344
Query: 207 VWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVR--PTKRIDF----SETDGEME 260
++ L D APH I AV T + F S+ D
Sbjct: 1345 AFVNVTVKDLND-----------NAPHFIHAVEHVSAVENWGTGHVIFQAKASDPDEGTN 1393
Query: 261 GRIVFALEKETEREKFKIRDENPWITV 287
G +V++L K+ R F I +++ IT+
Sbjct: 1394 GVVVYSL-KQNPRGLFHIHEKHGLITL 1419
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 106/259 (40%), Gaps = 49/259 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
LV Y + +GN+ F + S V LV G +D E + YSL I A D
Sbjct: 1712 LVHYRVAEGNEEGQFMIDG-----------SSGQVTLV--GKLDYETTSSYSLKIIAVDA 1758
Query: 87 KGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVSA 144
+ +++ +LDENDN+P F K S++ +V + + SV+A
Sbjct: 1759 GAEPLSSSCMLSISILDENDNAPSFP-----------KPSVSVDVLENMRIGELVASVTA 1807
Query: 145 TDADGDK---VAYKLAVPSN--LVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSP 197
TDAD + + Y + +N I P TG + L D + V Y L V A D P
Sbjct: 1808 TDADSGQNADITYSITATNNHGTFSISPSTGSIFLVKKLDYETQSV-YRLNVSAKDNGRP 1866
Query: 198 SRYAREPAQVWLQ-FNS--PVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSE 254
R + P + ++ FN P+ + + I A + I +
Sbjct: 1867 PRSSSIPVIIQVRDFNDNPPIFTPGDIFKSIPENLPASTSV------------MMITAHD 1914
Query: 255 TDGEMEGRIVFALEKETER 273
TD ++ G++ +++ ++ R
Sbjct: 1915 TDADINGQLEYSIVQQVPR 1933
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + P+ LV Y+I G D+ +F + + +SG L+ T
Sbjct: 2222 GDGFKIMQLTATDADEGPNALVTYTIISGADD-SFRI------------DPESGDLIATK 2268
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G ++ + + V D ND+SP FS+ Y F
Sbjct: 2269 -KLDRERRSKYSLLVRADD--GKQSSDMRLNITVKDVNDHSPKFSRATYSF 2316
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
G++DREE++ Y+L + ATD + T VT+ VLD NDN+P FSQ +Y
Sbjct: 2578 GELDREELSNYTLTVVATDKGEPPLSSTMDVTMVVLDVNDNTPSFSQNIY 2627
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 18/131 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT V + + + + + +R+SI GN N F + +S +GV
Sbjct: 2633 ENTLTGTDV--IQVFATDADEGTNGQIRFSIPGGNTNSDFRI------------DSVTGV 2678
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDV--LDENDNSPVFSQKVYRFIV 119
+ V +DRE + YSLV+ A D +G + TV++ LD ND SPVF Y V
Sbjct: 2679 ISVAK-QLDREARSSYSLVVQAAD-RGSSPRTDQATVNIVLLDVNDCSPVFELSPYTIGV 2736
Query: 120 GDLKSSLNSNV 130
+ +L +N+
Sbjct: 2737 QENLENLPTNI 2747
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 79/189 (41%), Gaps = 29/189 (15%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVL-LVTSGDIDREEVAQYSLVITATDVKG 88
Y I +GN+ F L +I + + L LV++G +DRE Y L+I D KG
Sbjct: 651 YRIVKGNEQRRFRL------DITVNPSGEGAFLHLVSTGGLDREVTPFYQLLIEVED-KG 703
Query: 89 INK--AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
K V V + D NDN P F Q Y+ S SS+ V+A+D
Sbjct: 704 EPKKFGYLQVNVTIQDINDNPPSFEQDQYQ----------TSVFEDAAVGSSVLQVAASD 753
Query: 147 AD---GDKVAYKL--AVPSNLVVIVPQTGELLLT-GDPPSDDVEYELTVEAHDLQSPSRY 200
D ++ Y L P I P+TG +++ G EY LT+ A D PS
Sbjct: 754 GDEGANAEIRYFLDEGTPFQ---IDPKTGTVVIKEGLDYESKREYSLTIHAVDNGVPSLS 810
Query: 201 AREPAQVWL 209
R A + L
Sbjct: 811 GRAEATIKL 819
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Query: 63 LVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKVY 115
++TS +DREE A Y L++ ATD +G++ + T V+V V D NDN P F Y
Sbjct: 2885 IITSSLLDREERANYQLLVVATDGGQPQGLSSSAT-VSVTVADINDNPPRFHHHPY 2939
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 23/144 (15%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
IL + S + V YS+ + +++ TF L NP T GV VT +D E V
Sbjct: 2331 ILASDSDSGINGEVTYSLEEDDEDETFLL-NPVT-----------GVFNVTR-PLDYE-V 2376
Query: 75 AQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHW 133
Q+ ++TA G +A T V +VLD NDN P F+ VY +S++ ++
Sbjct: 2377 QQF-YILTAKARDGGGQASTVRVYFNVLDVNDNPPAFNTSVY-------STSVSESLPAG 2428
Query: 134 KKFSSIGSVSATDADGDKVAYKLA 157
++G+ A D ++ Y++A
Sbjct: 2429 SSIVTVGASDADDGPNAQLLYRIA 2452
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 84/196 (42%), Gaps = 29/196 (14%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
MEN ++GT V L A + + ++ G+ F+L S++G
Sbjct: 3986 MENQRAGTAVTTLTASDADLPPNQGPFLFSLLSSGSAKSYFSL-------------SQNG 4032
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDN-SPVFSQKVYRFI 118
VL TS +IDRE+++ + L + D + T + V + D+NDN S S +V+
Sbjct: 4033 VL-TTSREIDREQISDFYLSVVIKDAGVPQMSSTGTIHVKINDQNDNPSEPRSVEVFVHY 4091
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGD 177
G++ S+G V D D D+ L PS+ + +P TG L
Sbjct: 4092 FGNMFPG-----------GSLGEVKPQDPDVQDRFHCSLIPPSSGLFSIP-TGSCNLNSK 4139
Query: 178 PPSDDVEYELTVEAHD 193
S D +E+T+ + D
Sbjct: 4140 ARSTDGAFEITIRSSD 4155
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 17/134 (12%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+DRE ++Y L+ITATD G+ VTV V D NDN+PVF+ SS
Sbjct: 2790 VDREARSRYVLLITATD-SGVPPLSGTCTVTVSVSDVNDNAPVFT-----------ASSF 2837
Query: 127 NSNVSH-WKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDD-V 183
++ ++ + + V+++DAD G+ L+ I P TG+++ + ++
Sbjct: 2838 HTTITEDAPTGTDVLLVNSSDADVGNNGVISLSGGHGQFSINPATGQIITSSLLDREERA 2897
Query: 184 EYELTVEAHDLQSP 197
Y+L V A D P
Sbjct: 2898 NYQLLVVATDGGQP 2911
>gi|74355151|gb|AAI03929.1| Protocadherin gamma subfamily B, 1 [Homo sapiens]
Length = 810
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 32/205 (15%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQK 113
+ SK+ LV +G ++RE+ A Y++ I ATD K + T +T+ + D NDN+PVF Q
Sbjct: 392 STSKNYYKLVIAGALNREQTADYNVTIIATDKGKPALSSRTSITLHISDINDNAPVFHQA 451
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV----PSNL---V 163
Y V + + +SI VSA+D D D+V+Y + P L V
Sbjct: 452 SYVVHVSE----------NNPPGASIAQVSASDPDLGPNDRVSYSILASDLEPRELLSYV 501
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVW---LQFNSP-VL-- 216
+ PQ+G + + + +ELT++A D SP+ A +V L N+P VL
Sbjct: 502 SVSPQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLNDNAPRVLYP 561
Query: 217 ----QDEQLLQMIDRKSEAPHRIEK 237
L M+ R +E + + K
Sbjct: 562 ALGPDGSALFDMVPRAAEPGYLVTK 586
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 30/175 (17%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGV---LLVTSGDIDREEVAQYSLVITATD----- 85
+GN + + NP + ++ ES G +L+ +DRE + + L++TA D
Sbjct: 160 EGNSLKLYTI-NPNQYFSLSTKESPDGSKYPVLLLEKPLDREHQSSHRLILTAMDGGDPP 218
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ G TH+ + V D NDN+PVFSQ+VYR SL NV W +S+ V AT
Sbjct: 219 LSGT----THIWIRVTDANDNAPVFSQEVYRV-------SLQENVP-WG--TSVLRVMAT 264
Query: 146 DAD---GDKVAYKL---AVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
D D ++ Y + ++L + P TG++ G ++ Y L+VEA D
Sbjct: 265 DQDEGINAEITYAFLNSPISTSLFNLNPNTGDITTNGTLDFEETSRYVLSVEAKD 319
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSP 108
+ T+G +D EE ++Y L + A D G++ A +V ++++DENDN+P
Sbjct: 297 ITTNGTLDFEETSRYVLSVEAKD-GGVHTAHCNVQIEIVDENDNAP 341
>gi|327270419|ref|XP_003219987.1| PREDICTED: protocadherin gamma-A6-like [Anolis carolinensis]
Length = 818
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 70/137 (51%), Gaps = 25/137 (18%)
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DREE + Y L++TATD ++ T + V VLD NDN+P+F+Q +Y V +
Sbjct: 202 LDREEQSVYDLILTATDGGDPFRSGTAQIKVRVLDANDNAPIFNQPIYEVTVKE------ 255
Query: 128 SNVSHWKKFSSIGSVSATDAD---GDKVAYKL----AVPSNLVVIVPQTGELLLTGDPPS 180
+ K S++ +VSATD D +V Y L S ++ TGE+ LTG S
Sbjct: 256 ----NIPKGSTVATVSATDLDEGLNGEVKYSLRKVTQFHSPQFLLNSTTGEITLTG---S 308
Query: 181 DDVE----YELTVEAHD 193
D E +E VEA D
Sbjct: 309 LDYEISSLHEFEVEAKD 325
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIV- 119
LVT+G +DRE + +++ IT TD GI T + + VLD NDN PVF + Y F +
Sbjct: 406 LVTAGTLDREHMPTFNITITGTD-NGIPPLSTTTVIALQVLDTNDNPPVFEKTDYTFYLV 464
Query: 120 -----GDLKSSLNSNVSHWKKFSSI 139
G L SL +N W++ + I
Sbjct: 465 ENNHRGSLIFSLRANDPDWEENARI 489
>gi|312072546|ref|XP_003139115.1| hypothetical protein LOAG_03530 [Loa loa]
Length = 2282
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 15/109 (13%)
Query: 68 DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
++DREE +YS+ + A D G+ + T +T+ + D NDN+P F+ Y+F+V
Sbjct: 433 EVDREERNEYSIKVKAWD--GLWEVRTSLTITIQDINDNAPTFNDSFYKFLVA------- 483
Query: 128 SNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELL 173
+ + F+ IG + A D D +V Y L S+L +I P +G +
Sbjct: 484 ---ADLEIFAEIGRILAFDEDDGLNGQVRYDLRCDSDLFMIEPSSGRIF 529
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 17/112 (15%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD- 85
L+ Y I D F ++ PTT G++L T+G +D EE++ Y +I A D
Sbjct: 699 LLTYHIIYDTDRLPFTIE-PTT-----------GIIL-TTGYVDFEEISSYHFLIMAIDS 745
Query: 86 -VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKF 136
+N VT++VLDENDN P F ++ V S + + ++H F
Sbjct: 746 GFPALNDT-AEVTIEVLDENDNVPEFENHYVQYTVS-ANSPVGTAIAHLSAF 795
>gi|196006169|ref|XP_002112951.1| hypothetical protein TRIADDRAFT_25152 [Trichoplax adhaerens]
gi|190584992|gb|EDV25061.1| hypothetical protein TRIADDRAFT_25152, partial [Trichoplax adhaerens]
Length = 2391
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 32/182 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y I +G++ FAL + +GVL + S +D E QY+L I+ATD K
Sbjct: 1108 IEYHIVEGDNEGKFAL------------DVDNGVLSIAS-KLDYERKKQYALNISATD-K 1153
Query: 88 GINKAETH--VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
GI + ++ +TV V+D ND++P F++ +Y +S+N NV F I SV+A
Sbjct: 1154 GIPRRSSYMKLTVYVVDVNDHAPTFNKTIY-------TASINENVP-LNTF--IASVAAY 1203
Query: 146 DADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSDD-VEYELTVEAHDLQSPSR 199
D D K+ Y + + ++ I Q G + + +Y LTV+AHD PS+
Sbjct: 1204 DRDTGKYGKITYSIPSGIANDTFKIDSQAGRITTAKYLDREQHPQYILTVDAHDNALPSK 1263
Query: 200 YA 201
Y+
Sbjct: 1264 YS 1265
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 83/183 (45%), Gaps = 32/183 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+Q++RYSI ++ H NP T I T+ +DRE +A Y+ ++ A
Sbjct: 1418 PNQIIRYSIIGTDNVHKAFTINPVTGRI------------ATAARLDRETIASYNFLVNA 1465
Query: 84 TDVK--GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D+ GI A V V V D ND P F+Q Y V ++ SS + +SI S
Sbjct: 1466 SDMSPFGIRTAIVSVDVRVTDINDVIPTFTQVPY---VVNISSSTSPQ-------TSIIS 1515
Query: 142 VSATDAD---GDKVAYKLAVPSNLVVIVPQTG---ELLLTGDPPSDDVEYELTVEAHDLQ 195
V A D D +++Y V ++ I TG + GD P + Y L + A D
Sbjct: 1516 VQAIDNDFGSNGQISYSFDVSTSRFSINSSTGVIKTIASLGDRP--NYRYTLRLIATDHG 1573
Query: 196 SPS 198
+P+
Sbjct: 1574 NPA 1576
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 84/178 (47%), Gaps = 31/178 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI G N TF + +S++G + T+ +DRE+ QY L + A D
Sbjct: 1213 ITYSIPSGIANDTFKI------------DSQAG-RITTAKYLDREQHPQYILTVDAHDNA 1259
Query: 88 GINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+K + T V + VLD NDN P FS + + F + + N K + + A D
Sbjct: 1260 LPSKYSSTQVVITVLDINDNPPQFSNQSHTFYIPE-------NFPPTK----VDRIIAVD 1308
Query: 147 ADGD---KVAYKLAVPS--NLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPS 198
D D ++ Y + + N +I PQTGEL T + + +Y+LTV A D SPS
Sbjct: 1309 KDKDSNSRITYSIVSGNVDNSFLINPQTGELSTTKSLNRERIAQYQLTVMAKDNGSPS 1366
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 104/243 (42%), Gaps = 57/243 (23%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSIT-QGNDNHTFALKNPTTHEIRNSTESKSG 60
EN++ GT + LV +S + YS GN N TF++ +S G
Sbjct: 1816 ENTQVGTIIT----LVTASDSDVRSNITYSFKPNGNGNDTFSI------------DSFRG 1859
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
L+ + +D E + Y L++ ATD I KA+T + V+VLD NDN+PVF + Y
Sbjct: 1860 -LITLARRLDYERITSYELIVQATD--QIQKAQTILIVNVLDYNDNAPVFDKPTYE---- 1912
Query: 121 DLKSSLNSNVSHWKKFS----SIGSVSATDAD-GD--KVAYKLAVPS-NLVVIVPQTGEL 172
+ ++FS + +V ATD D GD ++ Y + + S N I TG +
Sbjct: 1913 ----------ATLQEFSPPHQPVVTVHATDQDSGDNSRIVYSIEITSTNQFYINSTTGTI 1962
Query: 173 LLTGDPPSDDVEY-------ELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLL 222
+EY +L + A D P A P ++ + +PV + +
Sbjct: 1963 YT-----DRTIEYNPNMPIIQLVITARDNGFPQLIALVPVRIQITDVNDKAPVFDKNKYI 2017
Query: 223 QMI 225
Q +
Sbjct: 2018 QHV 2020
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 66/135 (48%), Gaps = 24/135 (17%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
I+ K + + YSI GN +++F L NP T E L T+ ++RE +
Sbjct: 1304 IIAVDKDKDSNSRITYSIVSGNVDNSF-LINPQTGE------------LSTTKSLNRERI 1350
Query: 75 AQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHW 133
AQY L + A D + + T VTV V D+ND+ P F+Q Y + + ++N+ V+
Sbjct: 1351 AQYQLTVMAKDNGSPSLNSTTKVTVIVTDQNDHDPKFNQTRYSASIAE-SVAINTTVT-- 1407
Query: 134 KKFSSIGSVSATDAD 148
+V ATDAD
Sbjct: 1408 -------TVYATDAD 1415
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 89/191 (46%), Gaps = 33/191 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
V+YSI GN+ F ++ PTT G++ V S ++++++ Y+L I A+D
Sbjct: 2154 VKYSIISGNNKKLFQIQ-PTT-----------GIVTV-SRILNQQDIGVYNLTILASDGA 2200
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G + T VT+ + ++ +P FSQ+ Y + + NS + S++ ++ A
Sbjct: 2201 AIGTRNSTTLVTI-TISKSPQAPRFSQQQYFGSIAE-----NSRIG-----STVMTIDAN 2249
Query: 146 DADGDKVAYKL-AVPSN-----LVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
+ DK+ YKL A PS+ I TG + L + ++ E Y VEA D P
Sbjct: 2250 SSTADKITYKLIANPSHPSDDTYFQIHSLTGIIALAKEVDTEKQEKYYFQVEAEDNYVPP 2309
Query: 199 RYAREPAQVWL 209
A P V +
Sbjct: 2310 NRAIVPVIVTI 2320
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 26/132 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y+I GN N+ F + N TT I T G +D E+ Y L +TATD
Sbjct: 785 IVYAILDGNPNNAFII-NATTGRI------------TTHGPLDAEKRQYYRLNVTATDEG 831
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
K + V V+V D +DN P F+++ I +K ++ N ++I +V ATD
Sbjct: 832 ATAKMDWCTVQVNVTDVDDNIPTFTKQE---ITIAIKENIPLN-------TTIVTVKATD 881
Query: 147 AD--GDKVAYKL 156
AD K++Y +
Sbjct: 882 ADVSASKISYLI 893
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 16/110 (14%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++++G + PI+ + L+RY I GN TF + +SG
Sbjct: 1712 ESTRAGMAI--YPIVATDRDSNEFALIRYEIVAGNLGQTFGI------------SERSGQ 1757
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVF 110
L T ++D E+ + L++ A D T V + V+D ND+ P+F
Sbjct: 1758 LY-TMKNLDYEKYPSFDLIVKAYDYNDTTLYSTCSVRISVIDMNDSPPLF 1806
>gi|119625608|gb|EAX05203.1| FAT tumor suppressor homolog 4 (Drosophila) [Homo sapiens]
Length = 4929
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 84/185 (45%), Gaps = 40/185 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+ YSI +GN+ FA+ +S SG V L+ G +D E YSLVI A D
Sbjct: 1244 LIHYSIIKGNEERQFAI------------DSTSGQVTLI--GKLDYEATPAYSLVIQAVD 1289
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
I T + +D+LDENDN+P F KS+L +V + + SV+
Sbjct: 1290 SGTIPLNSTCTLNIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVT 1338
Query: 144 ATDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
ATD+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1339 ATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQ 1395
Query: 195 QSPSR 199
P R
Sbjct: 1396 GRPPR 1400
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V+YSI+ G+ + R ++SGV+ T +DREE Y L I ATD
Sbjct: 724 VKYSISAGDRS-------------RFQVNAQSGVI-STRMALDREEKTAYQLQIVATDGG 769
Query: 88 GINKA-ETHVTVDVLDENDNSPVFSQKVYRFI----------VGDLKSS---LNSNVSHW 133
+ + VT+ VLD DN PVFSQ Y F+ VG + +S LNSN+S+
Sbjct: 770 NLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFENVALGYHVGSVSASTMDLNSNISYL 829
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 35/193 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L++YSI+ GN+ FA+ S +G+L + +D E ++ + I+A D
Sbjct: 3072 LIKYSISSGNEEGIFAIN------------SSTGILTLAKA-LDYELCQKHEMTISAIDG 3118
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + VTV+V+D NDNSPVF Y V + + +++ ++AT
Sbjct: 3119 GWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTV----------LENAPSGTTVIHLNAT 3168
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
DAD +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 3169 DADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQG---FLDFETKQSYHLTVKAFNVPDE 3225
Query: 198 SRYAREPAQVWLQ 210
R + + L+
Sbjct: 3226 ERCSFATVNIQLK 3238
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ Y+L + ATD KG + T V V VLD NDN+P+F+Q +Y+
Sbjct: 2056 TGELDREEVSNYTLTVVATD-KGQPSLSSSTEVVVMVLDINDNNPIFAQALYK 2107
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 99/258 (38%), Gaps = 44/258 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ T L T+ IDREE + Y L + A+
Sbjct: 826 ISYLITTGDQKGMFAINQVTGQ-------------LTTANVIDREEQSFYQLKVVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V D NDNSP F Q + S+N V +W+ SI A D
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAI---------ESVNV-VENWQAGHSIFQAKAVDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYARE 203
D V Y L P NL I + G + L G Y++ + A D+ P +
Sbjct: 921 DEGVNGMVLYSLKQNPKNLFAINEKNGTISLLGPLDVHAGSYQIEILASDMGVPQLSSSV 980
Query: 204 PAQVWLQ---FNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEME 260
V++ NSPV +QL + P + R ++ S+ D
Sbjct: 981 ILTVYVHDVNDNSPVF--DQLSYEVTLSESEP--VNSRFF--------KVQASDKDSGAN 1028
Query: 261 GRIVFALEKETEREKFKI 278
G I + + + + F I
Sbjct: 1029 GEIAYTIAEGNTGDAFGI 1046
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 82/194 (42%), Gaps = 38/194 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I +GN+ F L N + + + LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIIRGNEAGRFRLD-----ITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KGE 227
Query: 90 NKAETH--VTVDVLDENDNSPVFSQKVYR------FIVGDLKSSLNSNVSHWKKFSSIGS 141
K + V V V D NDN PVF Y+ +VG SS+
Sbjct: 228 PKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVG----------------SSVLQ 271
Query: 142 VSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQ 195
V+A DAD + Y+L + P+TG L+T P D +Y LTV+A D
Sbjct: 272 VAAADADEGTNADIRYRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTVQAMDRG 329
Query: 196 SPSRYAREPAQVWL 209
PS R A + L
Sbjct: 330 VPSLTGRAEALIQL 343
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 31/176 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN ++F++ N T EIR+ +DRE+V+ Y L I +
Sbjct: 2648 PNGQLDYEIVNGNMENSFSI-NHATGEIRSVRP------------LDREKVSHYVLTIKS 2694
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D KG T V V ++LDENDN+P FSQ ++ V + NS + + ++
Sbjct: 2695 SD-KGSPSQSTSVKVMINILDENDNAPRFSQ-IFSAHVPE-----NSPLGY-----TVTR 2742
Query: 142 VSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ +D D A Y + S I P TG+++++ +D + Y + V AHD
Sbjct: 2743 VTTSDEDIGINAISRYSIMDASLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2798
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1754 GDGSKIMQLTAMDADEGANALVTYTIISGADD-SFRI------------DPESGDLIATR 1800
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND++P FS+ VY F
Sbjct: 1801 -RLDRERRSKYSLLVRADD--GLQSSDMRINITVSDVNDHTPKFSRPVYSF 1848
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 33/177 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y + GN+++ F L S SG L VT +DRE ++ L+ITATD
Sbjct: 2242 LSYVLFGGNEDNAFTL-------------SASGELGVTQ-SLDRETKERFVLMITATD-S 2286
Query: 88 GINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G T++V+ D NDN P F+ K Y + + + + V+A+
Sbjct: 2287 GSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPE----------DAPTGTDVLLVNAS 2336
Query: 146 DADGDK---VAYKLAVPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSP 197
DAD K ++Y++ ++ I P TG+++ + D + D Y L V D SP
Sbjct: 2337 DADASKNAVISYRIIGGNSQFTINPSTGQIITSALLDRETKD-NYTLVVVCSDAGSP 2392
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + + A + + VRY I GN N F + +S +G
Sbjct: 2112 ENTLTGTDI--IQVFAADGDEGTNGQVRYGIVNGNTNQEFRI------------DSVTGA 2157
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
+ V +DRE+ Y L + ATD + +T V++ +LD ND PVF Y
Sbjct: 2158 ITVAK-PLDREKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPY 2211
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 19/91 (20%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGD 121
L T +DREE A YSL++ ATD+ ++ + V +LD NDNSPVF Y
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQY------ 694
Query: 122 LKSSLNSNVSHWKK----FSSIGSVSATDAD 148
+H K+ S I +VSATD D
Sbjct: 695 --------FAHIKENEPGGSYITTVSATDPD 717
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 35/177 (19%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKV 114
K+G + V SG +DRE+ + SL + A + ++G + E V V VLD ND P+F+ +
Sbjct: 3300 KTGQIYV-SGILDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND-PPIFTLNI 3357
Query: 115 YRFIVGD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLV 163
Y + + S+ +S+ + W +FS IGS + A
Sbjct: 3358 YSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGA---------------F 3402
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
I PQTG++ +T + + + Y L+V A D +PS V L+ N P+L
Sbjct: 3403 SINPQTGQITVTAELDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML 3459
Score = 38.1 bits (87), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 103/249 (41%), Gaps = 44/249 (17%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE----THVTVDVLDENDNSPVF 110
T K+GVL V +DRE + Y+LV+ D+ I + V++ +LD NDN P F
Sbjct: 1940 TVDKNGVLKVLKA-LDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTF 1998
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV----SATDADG---DKVAYKLAVP-SNL 162
L+ +++ + + I +V ATD D + Y L P N
Sbjct: 1999 ---------------LSPKLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNK 2043
Query: 163 VVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQD 218
I GE+ LTG+ ++V Y LTV A D PS + V + N+P+
Sbjct: 2044 FSIGTIDGEVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIF-- 2101
Query: 219 EQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKI 278
++A +++E T ++ ++ D G++ + + ++F+I
Sbjct: 2102 ----------AQALYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVNGNTNQEFRI 2151
Query: 279 RDENPWITV 287
ITV
Sbjct: 2152 DSVTGAITV 2160
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 117/298 (39%), Gaps = 53/298 (17%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN++ GT V L + A S + + I GN+ F E+++S +
Sbjct: 369 ENAQVGTVVALLTVTDADS-PAANGNISVQILGGNEQRHF--------EVQSSKVPNLSL 419
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGI--------NKAETHVTVDVLDENDNSPVFSQK 113
+ V S +DRE + Y+L ++ +D G + + + V D ND+ PVFSQ+
Sbjct: 420 IKVASA-LDRERIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPVFSQQ 478
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVI-VPQT 169
VYR + + S + +SATD D + Y + + L + +
Sbjct: 479 VYRVNLSE----------EAPPGSYVSGISATDGDSGLNANLRYSIVSGNGLGWFHISEH 528
Query: 170 GELLLTGDPPSDDVEYE----LTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMI 225
L+ TG D E L + A D P + Q LL +
Sbjct: 529 SGLVTTGSSGGLDRELASQIVLNISARD------QGVHPKVSYAQLVV------TLLDVN 576
Query: 226 DRKS--EAPHRIEKRRVTRAVRPTKRIDFSETDGEM--EGRIVFAL-EKETEREKFKI 278
D K P + V A T+ + TDG++ G + F+L E ET+R F++
Sbjct: 577 DEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGDLGDNGTVRFSLQEAETDRRSFRL 634
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 47/275 (17%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ + RYSI + T NP+T +I V S ++RE+ +Y + ++A
Sbjct: 2753 NAISRYSIMDASLPFTI---NPSTGDI------------VISRPLNREDTDRYRIRVSAH 2797
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
D T VT+ V D NDN+P FS+ Y +L + + S V+ V A
Sbjct: 2798 DSGW--TVSTDVTIFVTDINDNAPRFSRTSYYLDCPEL-TEIGSKVTQ---------VFA 2845
Query: 145 TDAD---GDKVAYKLAVPSNLVVIVPQTGELL---------LTGDPPSDDVEYELTVEAH 192
TD D +V Y + S I TGE+ +TG + + V +
Sbjct: 2846 TDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQNVTGFSNVNINRHSFIVTSS 2905
Query: 193 DLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDF 252
D PS + + + V ++ Q + K P + T+ +R T ID
Sbjct: 2906 DRGKPSLISETTVTINI-----VDSNDNAPQFLKSKYFTPVTKNVKVGTKLIRVTA-ID- 2958
Query: 253 SETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
+ D + + + + + KFK+ ++ WI+V
Sbjct: 2959 -DKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISV 2992
>gi|170039944|ref|XP_001847777.1| cadherin [Culex quinquefasciatus]
gi|167863519|gb|EDS26902.1| cadherin [Culex quinquefasciatus]
Length = 163
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 70/156 (44%), Gaps = 22/156 (14%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
+N+ + G +L + +H +RY IT GN FA+ N T G
Sbjct: 13 DNASAVDGKLLFKVLPFAPERHLPPSIRYKITSGNIGGVFAIHNTT------------GA 60
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L V G +D E++ +Y L +TA+D + T V V V D NDN PVF + YR + +
Sbjct: 61 LYVAKG-LDYEKLKKYELRLTASD--SFKENYTTVLVSVKDVNDNPPVFEKSSYRTQITE 117
Query: 122 -----LKSSLNSNVSHWKKFSSIGSVSATDADGDKV 152
L + + H + + S DADGD+V
Sbjct: 118 EDDRGLPKRVMRRLLHER--PKLASHRLQDADGDQV 151
>gi|148236823|ref|NP_001085086.1| uncharacterized protein LOC432157 precursor [Xenopus laevis]
gi|47939977|gb|AAH72235.1| MGC81522 protein [Xenopus laevis]
Length = 978
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 14/99 (14%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
++VT+ +DRE +A+Y+L++ A D+ + K + + TV V DENDN PVFS+ Y
Sbjct: 408 MIVTTSALDRENIAEYTLIVVAEDLGFPSLKTKKYYTVKVSDENDNVPVFSKHTYE---- 463
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKL 156
S L +N S I +V A DAD D K+ Y+L
Sbjct: 464 --ASILENNAPG----SYITTVVARDADSDQNGKINYRL 496
>gi|13786140|ref|NP_112610.1| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Rattus
norvegicus]
gi|22095544|sp|O88278.1|CELR3_RAT RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 3;
AltName: Full=Multiple epidermal growth factor-like
domains protein 2; Short=Multiple EGF-like domains
protein 2; Flags: Precursor
gi|3449288|dbj|BAA32459.1| MEGF2 [Rattus norvegicus]
Length = 3313
Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 480 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 538
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 539 KRY---VAQVREDV-------RPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFAIDS 588
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 589 LTGEIQVMA--PLDFEAEREYALRIRAQDAGRP 619
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 88/322 (27%), Positives = 132/322 (40%), Gaps = 67/322 (20%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVR--YSITQGNDNHTFALKNPTTHEIRNSTESKS 59
EN +GT V + V + P + R YS+ AL N + E+ S + +S
Sbjct: 327 ENEAAGTAV----LRVVAQDPDPGEAGRLVYSLA--------ALMNSRSLELF-SIDPQS 373
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFI 118
G L+ T+ +DRE + ++ L +TA D A T V V V D ND++PVF Q YR
Sbjct: 374 G-LIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYR-- 430
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLA-------VPSNLVVIVPQ 168
+L NV ++ I + ATD D A Y+ + I P+
Sbjct: 431 -----ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFVGSPAARTAAAAAFEIDPR 482
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVWLQFNSPVLQDEQLLQMID 226
+G + +G + +E YEL VEA D Q P P ++ + VL D
Sbjct: 483 SGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSATVRVHITVL---------D 528
Query: 227 RKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGRIVFALEKETEREKFKIRD 280
AP EKR V + VRP R+ ++ D + G + + + R F I
Sbjct: 529 ENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFAID- 587
Query: 281 ENPWITVDENGDVRVKKRWDFE 302
G+++V DFE
Sbjct: 588 -------SLTGEIQVMAPLDFE 602
Score = 41.6 bits (96), Expect = 0.56, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y
Sbjct: 702 SGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHL------- 754
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
LN + + +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 755 RLNEDAA---VGTSVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGMGLVTLALPLD 811
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 812 YKQERYFKLVLTASD 826
Score = 41.2 bits (95), Expect = 0.66, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 15/113 (13%)
Query: 68 DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIVGDLKSS 125
D+D E +Y +V+ AT +++A HV + +D+NDNSPV + Q ++ V + +
Sbjct: 1120 DLDYEARQEYVIVVQATSAPLVSRATVHVRL--VDQNDNSPVLNNFQILFNNYVSNRSDT 1177
Query: 126 LNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
S + IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1178 FPSGI--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1222
Score = 40.8 bits (94), Expect = 0.79, Method: Composition-based stats.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 556 LRVTATDKDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVMA-PLDFE 602
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y+L I A D ++ ++ V+D ND+SP+F ++ V + + L +V
Sbjct: 603 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHSPIFVSTPFQVSVLE-NAPLGHSV 661
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL-AVPSNL-VVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L V S+ VI TG + ++G + VE Y
Sbjct: 662 IH------IQAVDADHGENSRLEYSLTGVASDTPFVINSATGWVSVSGPLDRESVEHYFF 715
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 716 GVEARDHGSP 725
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 86/218 (39%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 972 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1019
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V Y L A D +G+ T V++ V D NDN+PVF + + V + NS V
Sbjct: 1020 AVPVYELTAYAVD-RGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1073
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1074 G-----SVVAQITAVDPDDGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1128
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 1129 YVIVVQATSAPLVSRATVHVRLVDQNDNSPVLNNFQIL 1166
Score = 38.1 bits (87), Expect = 5.8, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+D E+ Y+L ITA D KA+T +V V V D NDN+P F Y +V +
Sbjct: 910 LDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSE------ 963
Query: 128 SNVSHWKKFSSIGSVSATDADG 149
F+S+ +SATD D
Sbjct: 964 ----DAPPFTSVLQISATDRDA 981
>gi|390459302|ref|XP_003732267.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin alpha-13 [Callithrix
jacchus]
Length = 807
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 84/167 (50%), Gaps = 28/167 (16%)
Query: 38 NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHV 96
N FAL + +NS E S + LV +DREE+ ++SL++TA+D K +
Sbjct: 175 NDYFAL------DTQNSREQMSSLSLVLRKTLDREEIQEHSLLLTASDGGKPELTGTVQL 228
Query: 97 TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKV 152
+ +LD NDN+P F Q VY+ V L+++LN + + ++ATD D GD +
Sbjct: 229 LITILDVNDNAPEFYQSVYKVTV--LENALNGTL--------VIKLNATDPDEGTNGD-I 277
Query: 153 AYKLAVPSNLVVIV-----PQTGELLLTGDPPSDDVE-YELTVEAHD 193
Y P + V+ P GE+ G ++ + YE++VEA D
Sbjct: 278 VYSFRRPVSPAVVYAFTINPNNGEIRTKGKLDFEEKKLYEISVEAVD 324
Score = 41.2 bits (95), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE ++ Y LV+TA D + A V+V+V D NDN+P F+Q Y
Sbjct: 407 LVLDSALDRETMSAYELVVTARDGGSPSLWAMASVSVEVADVNDNAPAFAQPEYTVF--- 463
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
LK + N H I +VSA DAD
Sbjct: 464 LKEN-NPPGCH------IFTVSAQDAD 483
>gi|345786948|ref|XP_533840.3| PREDICTED: LOW QUALITY PROTEIN: cadherin EGF LAG seven-pass G-type
receptor 3 [Canis lupus familiaris]
Length = 3438
Score = 55.1 bits (131), Expect = 5e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 611 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 669
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 670 KRY---VAQVREDV-------RPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDS 719
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 720 LTGEIQVVA--PLDFEAEREYALRIRAQDAGRP 750
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 79/280 (28%), Positives = 115/280 (41%), Gaps = 53/280 (18%)
Query: 42 ALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDV 100
AL N + E+ S + SG L+ T +DRE + ++ L +TA D A T V V V
Sbjct: 488 ALMNSRSLELF-SIDPLSG-LIRTEAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTV 545
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLA 157
D ND++PVF Q YR +L NV ++ I + ATD D A Y+
Sbjct: 546 TDRNDHAPVFEQAQYR-------ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFV 595
Query: 158 VPSNLVV-------IVPQTGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVW 208
P I P++G + +G + +E YEL VEA D Q P P
Sbjct: 596 GPPAARAAASAAFEIDPRSGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSAT 650
Query: 209 LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGR 262
++ + VL D AP EKR V + VRP R+ ++ D + G
Sbjct: 651 VRVHITVL---------DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGL 701
Query: 263 IVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ + + R F I G+++V DFE
Sbjct: 702 VHYNIISGNSRGHFAID--------SLTGEIQVVAPLDFE 733
Score = 42.4 bits (98), Expect = 0.32, Method: Composition-based stats.
Identities = 51/179 (28%), Positives = 80/179 (44%), Gaps = 30/179 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 1200 ENSIVGSVVA--QITAVDPDEGPNAHIMYQIVEGNIPELFQM------------DIFSGE 1245
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIV 119
L D+D E +Y +V+ AT +++A HV + +D+NDNSPV + Q ++ V
Sbjct: 1246 LTALI-DLDYEARQEYVIVVQATSAPLVSRATVHVRL--VDQNDNSPVLNNFQILFNNYV 1302
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
+ + S V IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1303 SNRSDTFPSGV--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1353
Score = 40.4 bits (93), Expect = 1.1, Method: Composition-based stats.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 687 LRVTATDRDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVVA-PLDFE 733
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y+L I A D ++ ++ V+D ND++P+F ++ V + + L +V
Sbjct: 734 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLE-NAPLGHSV 792
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKLA--VPSNLVVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L P VI TG + ++G + VE Y
Sbjct: 793 IH------IQAVDADHGENARLEYSLTGMAPDMPFVINSATGWVSVSGPLDRESVEHYFF 846
Query: 188 TVEAHDLQSP 197
VEA D +P
Sbjct: 847 GVEARDHGTP 856
Score = 40.0 bits (92), Expect = 1.5, Method: Composition-based stats.
Identities = 43/136 (31%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLK 123
SG +DRE V Y + A D G A VTV VLD NDN P F+ K Y
Sbjct: 833 SGPLDRESVEHYFFGVEARD-HGTPPLSASASVTVTVLDVNDNRPEFTMKEYHL------ 885
Query: 124 SSLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPS 180
LN + + +++ SV+A D D + ++Y++ N I Q G L+T P
Sbjct: 886 -RLNEDAA---VGTTVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPL 941
Query: 181 D---DVEYELTVEAHD 193
D + ++L + A D
Sbjct: 942 DYKQERYFKLVLTASD 957
Score = 38.9 bits (89), Expect = 3.2, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 86/218 (39%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 1103 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1150
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V Y L A D +G+ T V++ V D NDN+PVF + + V + NS V
Sbjct: 1151 AVPVYELTAYAVD-RGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1204
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1205 G-----SVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1259
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 1260 YVIVVQATSAPLVSRATVHVRLVDQNDNSPVLNNFQIL 1297
Score = 38.1 bits (87), Expect = 5.8, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+D E+ Y+L ITA D KA+T +V V V D NDN+P F Y +V +
Sbjct: 1041 LDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSE------ 1094
Query: 128 SNVSHWKKFSSIGSVSATDADG 149
F+S+ +SATD D
Sbjct: 1095 ----DAPPFTSVLQISATDRDA 1112
>gi|165932370|ref|NP_078858.4| protocadherin Fat 4 precursor [Homo sapiens]
gi|172046149|sp|Q6V0I7.2|FAT4_HUMAN RecName: Full=Protocadherin Fat 4; Short=hFat4; AltName:
Full=Cadherin family member 14; AltName: Full=FAT tumor
suppressor homolog 4; AltName: Full=Fat-like cadherin
protein FAT-J; Flags: Precursor
Length = 4981
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 84/185 (45%), Gaps = 40/185 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+ YSI +GN+ FA+ +S SG V L+ G +D E YSLVI A D
Sbjct: 1244 LIHYSIIKGNEERQFAI------------DSTSGQVTLI--GKLDYEATPAYSLVIQAVD 1289
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
I T + +D+LDENDN+P F KS+L +V + + SV+
Sbjct: 1290 SGTIPLNSTCTLNIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVT 1338
Query: 144 ATDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
ATD+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1339 ATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQ 1395
Query: 195 QSPSR 199
P R
Sbjct: 1396 GRPPR 1400
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V+YSI+ G+ + R ++SGV+ T +DREE Y L I ATD
Sbjct: 724 VKYSISAGDRS-------------RFQVNAQSGVI-STRMALDREEKTAYQLQIVATDGG 769
Query: 88 GINKA-ETHVTVDVLDENDNSPVFSQKVYRFI----------VGDLKSS---LNSNVSHW 133
+ + VT+ VLD DN PVFSQ Y F+ VG + +S LNSN+S+
Sbjct: 770 NLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFENVALGYHVGSVSASTMDLNSNISYL 829
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 35/193 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L++YSI+ GN+ FA+ S +G+L + +D E ++ + I+A D
Sbjct: 3123 LIKYSISSGNEEGIFAIN------------SSTGILTLAKA-LDYELCQKHEMTISAIDG 3169
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + VTV+V+D NDNSPVF Y V + + +++ ++AT
Sbjct: 3170 GWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTV----------LENAPSGTTVIHLNAT 3219
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
DAD +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 3220 DADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQG---FLDFETKQSYHLTVKAFNVPDE 3276
Query: 198 SRYAREPAQVWLQ 210
R + + L+
Sbjct: 3277 ERCSFATVNIQLK 3289
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ Y+L + ATD KG + T V V VLD NDN+P+F+Q +Y+
Sbjct: 2109 TGELDREEVSNYTLTVVATD-KGQPSLSSSTEVVVMVLDINDNNPIFAQALYK 2160
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 99/258 (38%), Gaps = 44/258 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ T L T+ IDREE + Y L + A+
Sbjct: 826 ISYLITTGDQKGMFAINQVTGQ-------------LTTANVIDREEQSFYQLKVVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V D NDNSP F Q + S+N V +W+ SI A D
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAI---------ESVNV-VENWQAGHSIFQAKAVDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYARE 203
D V Y L P NL I + G + L G Y++ + A D+ P +
Sbjct: 921 DEGVNGMVLYSLKQNPKNLFAINEKNGTISLLGPLDVHAGSYQIEILASDMGVPQLSSSV 980
Query: 204 PAQVWLQ---FNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEME 260
V++ NSPV +QL + P + R ++ S+ D
Sbjct: 981 ILTVYVHDVNDNSPVF--DQLSYEVTLSESEP--VNSRFF--------KVQASDKDSGAN 1028
Query: 261 GRIVFALEKETEREKFKI 278
G I + + + + F I
Sbjct: 1029 GEIAYTIAEGNTGDAFGI 1046
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 82/194 (42%), Gaps = 38/194 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I +GN+ F L N + + + LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIIRGNEAGRFRLD-----ITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KGE 227
Query: 90 NKAETH--VTVDVLDENDNSPVFSQKVYR------FIVGDLKSSLNSNVSHWKKFSSIGS 141
K + V V V D NDN PVF Y+ +VG SS+
Sbjct: 228 PKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVG----------------SSVLQ 271
Query: 142 VSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQ 195
V+A DAD + Y+L + P+TG L+T P D +Y LTV+A D
Sbjct: 272 VAAADADEGTNADIRYRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTVQAMDRG 329
Query: 196 SPSRYAREPAQVWL 209
PS R A + L
Sbjct: 330 VPSLTGRAEALIQL 343
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 31/176 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN ++F++ N T EIR+ +DRE+V+ Y L I +
Sbjct: 2699 PNGQLDYEIVNGNMENSFSI-NHATGEIRSVRP------------LDREKVSHYVLTIKS 2745
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D KG T V V ++LDENDN+P FSQ ++ V + NS + + ++
Sbjct: 2746 SD-KGSPSQSTSVKVMINILDENDNAPRFSQ-IFSAHVPE-----NSPLGY-----TVTR 2793
Query: 142 VSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ +D D A Y + S I P TG+++++ +D + Y + V AHD
Sbjct: 2794 VTTSDEDIGINAISRYSIMDASLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2849
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1754 GDGSKIMQLTAMDADEGANALVTYTIISGADD-SFRI------------DPESGDLIATR 1800
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND++P FS+ VY F
Sbjct: 1801 -RLDRERRSKYSLLVRADD--GLQSSDMRINITVSDVNDHTPKFSRPVYSF 1848
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + + A + + VRY I GN N F + +S +G
Sbjct: 2165 ENTLTGTDI--IQVFAADGDEGTNGQVRYGIVNGNTNQEFRI------------DSVTGA 2210
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
+ V +DRE+ Y L + ATD + +T V++ +LD ND PVF Y
Sbjct: 2211 ITVAK-PLDREKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPY 2264
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 19/91 (20%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGD 121
L T +DREE A YSL++ ATD+ ++ + V +LD NDNSPVF Y
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQY------ 694
Query: 122 LKSSLNSNVSHWKK----FSSIGSVSATDAD 148
+H K+ S I +VSATD D
Sbjct: 695 --------FAHIKENEPGGSYITTVSATDPD 717
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 76/175 (43%), Gaps = 31/175 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y + GN+++ F L S SG L VT +DRE ++ L+ITATD
Sbjct: 2295 LSYVLFGGNEDNAFTL-------------SASGELGVTQ-SLDRETKERFVLMITATD-S 2339
Query: 88 GINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G T++V+ D NDN P F+ K Y + + + + V+A+
Sbjct: 2340 GSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPE----------DAPTGTDVLLVNAS 2389
Query: 146 DADGDKVAYKLAVPSN-LVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSP 197
DAD K A + N I P TG+++ + D + D Y L V D SP
Sbjct: 2390 DADASKNAVIRIIGGNSQFTINPSTGQIITSALLDRETKD-NYTLVVVCSDAGSP 2443
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 81/177 (45%), Gaps = 35/177 (19%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKV 114
K+G + V SG +DRE+ + SL + A + ++G + E V V VLD ND P+F+ +
Sbjct: 3351 KTGQIYV-SGILDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND-PPIFTLNI 3408
Query: 115 YRFIVGD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLV 163
Y + + S+ +S+ + W +FS IGS + A
Sbjct: 3409 YSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGA---------------F 3453
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
I PQTG++ +T + + + Y L+V A D +PS V L+ N P+L
Sbjct: 3454 SINPQTGQITVTAELDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 103/249 (41%), Gaps = 44/249 (17%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE----THVTVDVLDENDNSPVF 110
T K+GVL V +DRE + Y+LV+ D+ I + V++ +LD NDN P F
Sbjct: 1993 TVDKNGVLKVLKA-LDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTF 2051
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV----SATDADG---DKVAYKLAVP-SNL 162
L+ +++ + + I +V ATD D + Y L P N
Sbjct: 2052 ---------------LSPKLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNK 2096
Query: 163 VVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQD 218
I GE+ LTG+ ++V Y LTV A D PS + V + N+P+
Sbjct: 2097 FSIGTIDGEVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIF-- 2154
Query: 219 EQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKI 278
++A +++E T ++ ++ D G++ + + ++F+I
Sbjct: 2155 ----------AQALYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVNGNTNQEFRI 2204
Query: 279 RDENPWITV 287
ITV
Sbjct: 2205 DSVTGAITV 2213
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 118/299 (39%), Gaps = 55/299 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN++ GT V L + A S + + I GN+ F E+++S +
Sbjct: 369 ENAQVGTVVALLTVTDADS-PAANGNISVQILGGNEQRHF--------EVQSSKVPNLSL 419
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGI--------NKAETHVTVDVLDENDNSPVFSQK 113
+ V S +DRE + Y+L ++ +D G + + + V D ND+ PVFSQ+
Sbjct: 420 IKVASA-LDRERIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPVFSQQ 478
Query: 114 VYRFIVGDLKSSLNSNVS-HWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVI-VPQ 168
VYR N+S S + +SATD D + Y + + L + +
Sbjct: 479 VYRV-----------NLSEEAPPGSYVSGISATDGDSGLNANLRYSIVSGNGLGWFHISE 527
Query: 169 TGELLLTGDPPSDDVEYE----LTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQM 224
L+ TG D E L + A D P + Q LL +
Sbjct: 528 HSGLVTTGSSGGLDRELASQIVLNISARD------QGVHPKVSYAQLVV------TLLDV 575
Query: 225 IDRKS--EAPHRIEKRRVTRAVRPTKRIDFSETDGEM--EGRIVFAL-EKETEREKFKI 278
D K P + V A T+ + TDG++ G + F+L E ET+R F++
Sbjct: 576 NDEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGDLGDNGTVRFSLQEAETDRRSFRL 634
Score = 37.7 bits (86), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 110/275 (40%), Gaps = 47/275 (17%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ + RYSI + T NP+T +I V S ++RE+ +Y + ++A
Sbjct: 2804 NAISRYSIMDASLPFTI---NPSTGDI------------VISRPLNREDTDRYRIRVSAH 2848
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
D T VT+ V D NDN+P FS+ Y +L + + S V+ V A
Sbjct: 2849 DSGW--TVSTDVTIFVTDINDNAPRFSRTSYYLDCPEL-TEIGSKVTQ---------VFA 2896
Query: 145 TDAD---GDKVAYKLAVPSNLVVIVPQTGELL---------LTGDPPSDDVEYELTVEAH 192
TD D +V Y + S I TGE+ +TG + + V +
Sbjct: 2897 TDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQNVTGFSNVNINRHSFIVTSS 2956
Query: 193 DLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDF 252
D PS + + + V ++ Q + K P + T+ +R T ID
Sbjct: 2957 DRGKPSLISETTVTINI-----VDSNDNAPQFLKSKYFTPVTKNVKVGTKLIRVTA-ID- 3009
Query: 253 SETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
+ D + + + + + KFK+ ++ WI+V
Sbjct: 3010 -DKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISV 3043
>gi|426350320|ref|XP_004042726.1| PREDICTED: protocadherin beta-18-like isoform 3 [Gorilla gorilla
gorilla]
Length = 791
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 80/174 (45%), Gaps = 32/174 (18%)
Query: 37 DNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETH 95
DN F LK PT K+ LVT +DRE +Y++ IT TD+ K E +
Sbjct: 391 DNLPFVLK-PTF---------KNFYALVTEHPLDREVRNEYNITITVTDLGTPRLKTEHN 440
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KV 152
+TV V D NDN+P+F+Q Y V + NS H IGSVSATD D +V
Sbjct: 441 ITVLVSDVNDNAPIFTQTSYTLFVRE----NNSPALH------IGSVSATDRDSGTNAQV 490
Query: 153 AYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPS 198
Y L P ++LV I G L + + E+E V A D SP+
Sbjct: 491 TYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYESLQEFEFRVGAADHGSPA 544
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 35 GNDNHTFALKNPTTH-EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA- 92
G N+T + NP H ++R+ E + LV +DRE+ ++ SL +TA D ++
Sbjct: 169 GVQNYTIS-PNPHFHLKLRDGDEGRKYPELVLDQSLDREKESELSLTLTAVDGGSPPRSG 227
Query: 93 ETHVTVDVLDENDNSPVFSQKVY 115
T + V VLD NDN+P F + VY
Sbjct: 228 TTLINVVVLDINDNAPEFEKPVY 250
>gi|11128035|ref|NP_061746.1| protocadherin gamma-B2 isoform 1 precursor [Homo sapiens]
gi|37999832|sp|Q9Y5G2.1|PCDGE_HUMAN RecName: Full=Protocadherin gamma-B2; Short=PCDH-gamma-B2; Flags:
Precursor
gi|5456959|gb|AAD43725.1| protocadherin gamma B2 [Homo sapiens]
gi|119582354|gb|EAW61950.1| hCG1982215, isoform CRA_ac [Homo sapiens]
Length = 931
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 34/206 (16%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQK 113
+ SK+ LVT G +DREE+ +Y+L ITATD K + VT+ + D NDN+PVF Q
Sbjct: 396 SSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPLSSSIIVTLHISDVNDNAPVFQQT 455
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL-------- 162
Y V + + +SI +SA+D D +V+Y + V S+L
Sbjct: 456 SYMVHVAE----------NNPPGASIAQISASDPDLGPSGQVSYSI-VASDLKPREILSY 504
Query: 163 VVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVL-- 216
V + Q+G + + + +ELT++A D SP+ A +V L N+P +
Sbjct: 505 VSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLNDNAPRVLY 564
Query: 217 -----QDEQLLQMIDRKSEAPHRIEK 237
L M+ R +E + + K
Sbjct: 565 PALGPDGSALFDMVPRAAEPGYLVTK 590
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++K GT P L S P+ L RY + NDN F L T + R E
Sbjct: 144 ESTKPGTTFPLDPAL--DSDVGPNSLQRYHL---NDNEYFDLAEKQTPDGRKYPE----- 193
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYR 116
L+ +DREE + + LV+TA D ++ T + + V D NDN PVFSQ VYR
Sbjct: 194 -LILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYR 248
>gi|397490949|ref|XP_003816443.1| PREDICTED: protocadherin Fat 4 [Pan paniscus]
Length = 4981
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 84/185 (45%), Gaps = 40/185 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+ YSI +GN+ FA+ +S SG V L+ G +D E YSLVI A D
Sbjct: 1244 LIHYSIIKGNEERQFAI------------DSTSGQVALI--GKLDYEATPAYSLVIQAVD 1289
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
I T + +D+LDENDN+P F KS+L +V + + SV+
Sbjct: 1290 SGTIPLNSTCTLNIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVT 1338
Query: 144 ATDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
ATD+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1339 ATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQ 1395
Query: 195 QSPSR 199
P R
Sbjct: 1396 GRPPR 1400
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 35/193 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L++YSI+ GN+ FA+ S +G+L + +D E ++ + I+A D
Sbjct: 3123 LIKYSISSGNEEGIFAIN------------SSTGILTLAKA-LDYELCQKHEMTISAIDG 3169
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + VTV+V+D NDNSPVF Y V + + +++ ++AT
Sbjct: 3170 GWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTV----------LENAPSGTTVIHLNAT 3219
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
DAD +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 3220 DADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQG---FLDFETKQSYHLTVKAFNVPDE 3276
Query: 198 SRYAREPAQVWLQ 210
R + V L+
Sbjct: 3277 ERCSFATVNVQLK 3289
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V+YSI+ G+ + R ++SGV+ T +DREE Y L I ATD
Sbjct: 724 VKYSISAGDRS-------------RFQVNAQSGVI-STRMALDREEKTAYQLQIVATDGG 769
Query: 88 GINKA-ETHVTVDVLDENDNSPVFSQKVYRFI----------VGDLKSS---LNSNVSHW 133
+ + VT+ VLD DN PVFSQ Y F+ VG + +S LNSN+S+
Sbjct: 770 NLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFENVALGYHVGSVSASTMDLNSNISYL 829
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ Y+L + ATD KG + T V V VLD NDN+P+F+Q +Y+
Sbjct: 2109 TGELDREEVSNYTLTVVATD-KGQPSLSSSTEVVVMVLDINDNNPIFAQALYK 2160
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 99/258 (38%), Gaps = 44/258 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ T L T+ IDREE + Y L + A+
Sbjct: 826 ISYLITTGDQKGMFAINQVTGQ-------------LTTANVIDREEQSFYQLKVVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V D NDNSP F Q + S+N V +W+ +I A D
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAI---------ESVNV-VENWQAGHNIFQAKAVDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYARE 203
D V Y L P NL I + G + L G Y++ + A D+ P +
Sbjct: 921 DEGVNGMVLYSLKQNPKNLFTINEKNGTISLLGPLDVHAGSYQIEILASDMGVPQLSSSV 980
Query: 204 PAQVWLQ---FNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEME 260
V++ NSPV +QL + P + R ++ S+ D
Sbjct: 981 ILTVYVHDVNDNSPVF--DQLSYEVTLSESEP--VNSRFF--------KVQASDKDSGAN 1028
Query: 261 GRIVFALEKETEREKFKI 278
G I + + + + F I
Sbjct: 1029 GEIAYTIAEGNTGDAFGI 1046
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 82/194 (42%), Gaps = 38/194 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I +GN+ F L N + + + LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIIRGNEAGRFRLD-----ITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KGE 227
Query: 90 NKAETH--VTVDVLDENDNSPVFSQKVYR------FIVGDLKSSLNSNVSHWKKFSSIGS 141
K + V V V D NDN PVF Y+ +VG SS+
Sbjct: 228 PKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVG----------------SSVLQ 271
Query: 142 VSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQ 195
V+A DAD + Y+L + P+TG L+T P D +Y LTV+A D
Sbjct: 272 VAAADADEGTNADIRYRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTVQAMDRG 329
Query: 196 SPSRYAREPAQVWL 209
PS R A + L
Sbjct: 330 VPSLTGRAEALIQL 343
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 86/174 (49%), Gaps = 27/174 (15%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN ++F++ N T EIR+ +DRE+V+ Y L I +
Sbjct: 2699 PNGQLDYEIVNGNMENSFSI-NHATGEIRSVRP------------LDREKVSHYVLTIKS 2745
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D KG T V V ++LDENDN+P FSQ ++ V + SSL V+ +
Sbjct: 2746 SD-KGSPSQSTSVKVMINILDENDNAPRFSQ-IFSAHVPE-NSSLGYTVTRV-------T 2795
Query: 142 VSATDADGDKVAYKLAVPSNL-VVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
S D + ++ + +NL I P TG+++++ +D + Y + V AHD
Sbjct: 2796 TSDEDVGINAISRYSIMDANLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2849
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1754 GDGSKIMQLTAMDADEGANALVTYTIISGADD-SFRI------------DPESGDLIATR 1800
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND++P FS+ VY F
Sbjct: 1801 -RLDRERRSKYSLLVRADD--GLQSSDMRINITVSDVNDHTPKFSRPVYSF 1848
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + + A + + VRY I GN N F + +S +G
Sbjct: 2165 ENTLTGTDI--IQVFAADGDEGTNGQVRYGIVNGNTNQEFRI------------DSVTGA 2210
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
+ V +DRE+ Y L + ATD + +T V++ +LD ND PVF Y
Sbjct: 2211 ITVAK-PLDREKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPY 2264
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 19/91 (20%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGD 121
L T +DREE A YSL++ ATD+ ++ + V +LD NDNSPVF Y
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQY------ 694
Query: 122 LKSSLNSNVSHWKK----FSSIGSVSATDAD 148
+H K+ S I +VSATD D
Sbjct: 695 --------FAHIKENEPGGSYITTVSATDPD 717
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 108/275 (39%), Gaps = 47/275 (17%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ + RYSI N T NP+T +I V S ++RE+ +Y + ++A
Sbjct: 2804 NAISRYSIMDANLPFTI---NPSTGDI------------VISRPLNREDTDRYRIRVSAH 2848
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
D T VT+ V D NDN+P FS+ Y +L + S + V A
Sbjct: 2849 DSGW--TVSTDVTIFVTDINDNAPRFSRTSYYLDCPELT----------EIGSKVAQVFA 2896
Query: 145 TDAD---GDKVAYKLAVPSNLVVIVPQTGELL---------LTGDPPSDDVEYELTVEAH 192
TD D +V Y + S I TGE+ +TG + + V +
Sbjct: 2897 TDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQNVTGFSNVNINRHSFIVTSS 2956
Query: 193 DLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDF 252
D PS + + + V ++ Q + K P + T+ +R T ID
Sbjct: 2957 DRGKPSLISETTVTINI-----VDSNDNAPQFLKSKYFTPVTKNVKVGTKLIRVTA-ID- 3009
Query: 253 SETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
+ D + + + + + KFK+ ++ WI+V
Sbjct: 3010 -DKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISV 3043
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 81/177 (45%), Gaps = 35/177 (19%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKV 114
K+G + V SG +DRE+ + SL + A + ++G + E V V VLD ND PVF+ V
Sbjct: 3351 KTGQIYV-SGILDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND-PPVFTLNV 3408
Query: 115 YRFIVGD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLV 163
Y + + S+ +S+ + W +FS IGS + A
Sbjct: 3409 YSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGA---------------F 3453
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
I PQTG++ +T + + + Y L+V A D +PS V L+ N P+L
Sbjct: 3454 SINPQTGQITVTAELDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 75/175 (42%), Gaps = 31/175 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y + GN+++ F L S SG L VT +DRE ++ L+ITATD
Sbjct: 2295 LSYVLFGGNEDNAFTL-------------SASGELGVTQ-SLDRETKERFVLMITATD-S 2339
Query: 88 GINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G T++V+ D NDN P F+ K Y + + + + V+A+
Sbjct: 2340 GSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPE----------DAPTGTDVLLVNAS 2389
Query: 146 DADGDKVAYKLAVPSN-LVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSP 197
DAD A + N I P TG+++ + D + D Y L V D SP
Sbjct: 2390 DADASTNAVIRIIGGNSQFTINPSTGQIITSALLDRETKD-NYTLVVVCSDAGSP 2443
Score = 38.1 bits (87), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 103/249 (41%), Gaps = 44/249 (17%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE----THVTVDVLDENDNSPVF 110
T K+GVL V +DRE + Y+LV+ D+ I + V++ +LD NDN P F
Sbjct: 1993 TVDKNGVLKVLKA-LDRESQSFYNLVVQVHDLPQIPASRFTSTAQVSIILLDVNDNPPTF 2051
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV----SATDADG---DKVAYKLAVP-SNL 162
L+ +++ + + I +V ATD D + Y L P N
Sbjct: 2052 ---------------LSPKLTYIPENTPIDTVVFKAQATDPDSGPNSYIEYTLLNPLGNK 2096
Query: 163 VVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQD 218
I GE+ LTG+ ++V Y LTV A D PS + V + N+P+
Sbjct: 2097 FSIGTIDGEVRLTGELDREEVSNYTLTVVATDKGQPSLSSSTEVVVMVLDINDNNPIF-- 2154
Query: 219 EQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKI 278
++A +++E T ++ ++ D G++ + + ++F+I
Sbjct: 2155 ----------AQALYKVEINENTLTGTDIIQVFAADGDEGTNGQVRYGIVNGNTNQEFRI 2204
Query: 279 RDENPWITV 287
ITV
Sbjct: 2205 DSVTGAITV 2213
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 117/298 (39%), Gaps = 53/298 (17%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN++ GT V L + A S + + I GN+ F E+++S +
Sbjct: 369 ENAQVGTVVALLTVTDADS-PAANGNISVQILGGNEQRHF--------EVQSSKVPNLSL 419
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGI--------NKAETHVTVDVLDENDNSPVFSQK 113
+ V S +DRE + Y+L ++ +D G + + + V D ND+ PVFSQ+
Sbjct: 420 IKVASA-LDRERIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPVFSQQ 478
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVI-VPQT 169
VYR + + S + +SATD D + Y + + L + +
Sbjct: 479 VYRVNLSE----------EAPPGSYVSGISATDGDSGLNANLRYSIVSGNGLGWFHISEH 528
Query: 170 GELLLTGDPPSDDVEYE----LTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMI 225
L+ TG D E L + A D P + Q LL +
Sbjct: 529 SGLVTTGSSGGLDRELASQIVLNISARD------QGVHPKVSYAQLVV------TLLDVN 576
Query: 226 DRKS--EAPHRIEKRRVTRAVRPTKRIDFSETDGEM--EGRIVFAL-EKETEREKFKI 278
D K P + V A T+ + TDG++ G + F+L E ET+R F++
Sbjct: 577 DEKPVFSQPEGYDVSVVENAPTGTELLMLRATDGDLGDNGTVRFSLQEAETDRRSFRL 634
>gi|301753547|ref|XP_002912651.1| PREDICTED: protocadherin beta-3-like [Ailuropoda melanoleuca]
Length = 778
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 93/197 (47%), Gaps = 32/197 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT TD+ K + + TV V D NDN+P FSQ Y V +
Sbjct: 403 LVTERPLDRETQAEYNITITVTDLGTPRLKTQHNSTVTVSDVNDNAPAFSQSSYTLRVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP--------SNLVVIVPQTG 170
NS H IGSVSATD D +V Y L +P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDAGANAQVTYSLLLPPHDPHLPLASLVSINADNG 512
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ----- 220
+L + ++ +E V A D SP+ ++ +V + N+P VL Q
Sbjct: 513 QLFALRALDYEALQAFEFGVRAADRGSPALSSQALVRVLVVDDNDNAPFVLYPLQNGSAP 572
Query: 221 LLQMIDRKSEAPHRIEK 237
+++ R +EA + + K
Sbjct: 573 CTELVPRAAEAGYLVTK 589
>gi|297674308|ref|XP_002815174.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4 [Pongo abelii]
Length = 5022
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 84/185 (45%), Gaps = 40/185 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+ YSI +GN+ FA+ +S SG V L+ G +D E YSLVI A D
Sbjct: 1244 LIHYSIIKGNEERQFAI------------DSTSGQVALI--GKLDYEATPAYSLVIQAVD 1289
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
I T + +D+LDENDN+P F KS+L +V + + SV+
Sbjct: 1290 SGTIPLNSTCTLNIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVT 1338
Query: 144 ATDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
ATD+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1339 ATDSDSGDNADLYYSITGTNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQ 1395
Query: 195 QSPSR 199
P R
Sbjct: 1396 GRPPR 1400
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 35/193 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L++YSI+ GN+ FA+ S +G+L + +D E ++ + I+A D
Sbjct: 3165 LIKYSISSGNEEGIFAIN------------SSTGILTLAKA-LDYELCQKHEMTISAIDG 3211
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + VTV+V+D NDNSPVF Y V + + +++ ++AT
Sbjct: 3212 GWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTV----------LENAPSGTTVIHLNAT 3261
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
DAD +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 3262 DADSGTNAVIAYTIQSSDSDLFVIDPNTGVITTQG---FLDFETKQSYHLTVKAFNVPDE 3318
Query: 198 SRYAREPAQVWLQ 210
R + V L+
Sbjct: 3319 ERCSFATVNVQLK 3331
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ Y+L + ATD KG + T V V VLD NDN+P+F+Q +Y+
Sbjct: 2109 TGELDREEVSNYTLTVVATD-KGQQSLSSSTEVVVMVLDINDNNPIFAQALYK 2160
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 58/119 (48%), Gaps = 28/119 (23%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V+YSI+ G+ + R ++SGV+ T +DREE Y L + ATD
Sbjct: 724 VKYSISAGDRS-------------RFQVNAQSGVI-STRMALDREEKTAYQLQVVATDGG 769
Query: 88 GINKA-ETHVTVDVLDENDNSPVFSQKVYRFI----------VGDLKSS---LNSNVSH 132
+ + VT+ VLD DN PVFSQ Y F+ VG + +S LNSN+S+
Sbjct: 770 NLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFENVALGYHVGSVSASTMDLNSNISY 828
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 100/258 (38%), Gaps = 44/258 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ + T L T+ IDREE + Y L + A+
Sbjct: 826 ISYLITTGDQKGMFAINHVTGQ-------------LTTANVIDREEQSFYQLKVVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V D NDNSP F Q + S+N V +W+ SI A D
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAI---------ESVNV-VENWQAGHSIFQAKAVDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYARE 203
D V Y L P NL I + G + L G Y++ + A D+ P +
Sbjct: 921 DEGVNGMVLYSLKQNPKNLFAINEKNGTISLLGPLDVHAGSYQIEILASDMGVPQLSSSV 980
Query: 204 PAQVWLQ---FNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEME 260
V++ NSPV +QL + P + R ++ S+ D
Sbjct: 981 ILTVYVHDVNDNSPVF--DQLSYEVTLSESEP--VNSRFF--------KVQASDKDSGAN 1028
Query: 261 GRIVFALEKETEREKFKI 278
G I + + + + F I
Sbjct: 1029 GEIAYTIAEGNTGDAFGI 1046
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 82/194 (42%), Gaps = 38/194 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I +GN+ F L N + + + LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIIRGNEAGRFRLD-----ITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KGE 227
Query: 90 NKAETH--VTVDVLDENDNSPVFSQKVYR------FIVGDLKSSLNSNVSHWKKFSSIGS 141
K + V V V D NDN PVF Y+ +VG SS+
Sbjct: 228 PKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVG----------------SSVLQ 271
Query: 142 VSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQ 195
V+A DAD + Y+L + P+TG L+T P D +Y LTV+A D
Sbjct: 272 VAAADADEGTNADIRYRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTVQAMDRG 329
Query: 196 SPSRYAREPAQVWL 209
PS R A + L
Sbjct: 330 VPSLTGRAEALIQL 343
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 31/176 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN ++F++ N T EIR+ +DRE+V+ Y L I +
Sbjct: 2741 PNGQLDYEIVNGNMENSFSI-NHATGEIRSIRP------------LDREKVSHYVLTIKS 2787
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D KG T V V ++LDENDN+P FSQ ++ V + NS + + ++
Sbjct: 2788 SD-KGSPSQSTSVKVMINILDENDNAPRFSQ-IFSAHVPE-----NSPLGY-----TVTR 2835
Query: 142 VSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ +D D A Y + S I P TG+++++ +D + Y + V AHD
Sbjct: 2836 VTTSDEDIGINAISRYSIMDTSLPFTINPSTGDIIISRPLNREDTDRYRIRVSAHD 2891
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1754 GDGSKIMQLTAMDADEGANALVTYTIISGADD-SFRI------------DPESGDLIATR 1800
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND++P FS+ VY F
Sbjct: 1801 -RLDRERRSKYSLLVRADD--GLQSSDMRINITVSDVNDHTPKFSRPVYSF 1848
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + + A + + VRY I GN N F + +S +G
Sbjct: 2165 ENTLTGTDI--IQVFAADGDEGTNGQVRYGIVNGNTNQEFRI------------DSVTGA 2210
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
+ V +DRE+ Y L + ATD + +T V++ +LD ND PVF Y
Sbjct: 2211 ITVAK-PLDREKTPTYHLTVQATDRGSTPRTDTSTVSIVLLDINDFVPVFELSPY 2264
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 45/91 (49%), Gaps = 19/91 (20%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGD 121
L T +DREE A YSL++ ATD+ ++ + V +LD NDNSPVF Y
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDLGSPPQSSMARINVSLLDINDNSPVFYPVQY------ 694
Query: 122 LKSSLNSNVSHWKK----FSSIGSVSATDAD 148
+H K+ S I +VSATD D
Sbjct: 695 --------FAHIKENEPGGSYITTVSATDPD 717
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 28/155 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN++ GT V L + A S + + I GN+ F ++ S++ +
Sbjct: 369 ENAQVGTVVALLTVTDADS-PAANGNISVQILGGNEQRHFEVQ---------SSKVPNLX 418
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGI--------NKAETHVTVDVLDENDNSPVFSQK 113
L+ + +DRE + Y+L ++ +D G + + + V D ND+ PVFSQ+
Sbjct: 419 LIKVASALDRERIPSYNLTVSVSDNYGAPPGAAVQARSSVASLVIFVNDINDHPPVFSQQ 478
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
VYR + + S + +SATD D
Sbjct: 479 VYRVNLSE----------EAPPGSYVSGISATDGD 503
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 35/177 (19%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKV 114
K+G + V SG +DRE+ + SL + A + ++G + E V V VLD ND PVF+ +
Sbjct: 3393 KTGQIYV-SGILDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND-PPVFTLNI 3450
Query: 115 YRFIVGD---------LKSSLNSN-VSHWKK-FSSIGSVSATDADGDKVAYKLAVPSNLV 163
Y + + S+ +S+ + W + F IGS + A
Sbjct: 3451 YSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFFYFIGSGNENGA---------------F 3495
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
I PQTG++ +T + + + Y L+V A D +PS V L+ N P+L
Sbjct: 3496 SINPQTGQITVTAELDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML 3552
>gi|62510881|sp|Q5DRC9.1|PCDB5_PANTR RecName: Full=Protocadherin beta-5; Short=PCDH-beta-5; Flags:
Precursor
Length = 795
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 52/103 (50%), Gaps = 14/103 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 402 LVTQRTLDRESQAEYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN 161
S IGSVSATD D +V Y L P N
Sbjct: 462 NNSPA----------LQIGSVSATDRDSGTNAQVTYSLLPPQN 494
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + SL +TA D ++ T + + VLD NDN+P F Q +Y V +
Sbjct: 194 LVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSLYEVQVPE 253
Query: 122 LKSSLNSNV----SHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLL 174
S LNS V + + GSV+ GD+V VI +TGE+ L
Sbjct: 254 -NSPLNSLVVVVSARDLDAGAYGSVAYALFQGDEVTQPF-------VIDEKTGEIRL 302
>gi|321466681|gb|EFX77675.1| hypothetical protein DAPPUDRAFT_305404 [Daphnia pulex]
Length = 1849
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 15/111 (13%)
Query: 2 ENSKSGTGVK-GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
EN+ +GT V+ PI + PH ++ YS+T GN + F + +P E+
Sbjct: 664 ENAPAGTRVQLRQPIKAEDADSWPHNVIHYSLT-GNGSRLFRI-DPIGGELS-------- 713
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS 111
+V S +DRE A Y+L +TATD G A +T+ + DENDN+PV S
Sbjct: 714 --VVRSKSLDRERTAFYNLTVTATD--GALNAHAQLTILIEDENDNAPVIS 760
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 70/150 (46%), Gaps = 12/150 (8%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVY 115
K+G LLV +G IDRE+ + L + A D +G K+ V + + D NDN+P F
Sbjct: 1015 KTG-LLVVNGSIDREQTEFFRLTVQAAD-EGFPPLKSRADVVIYITDINDNAPQFDLPSG 1072
Query: 116 RFIVGDLKSSLNSNVSHWK-KFSSIGSVSATDADGD-----KVAYKLAVPSNLVVIVPQT 169
L+ + +++ +++ V ATDAD D V Y+L N I T
Sbjct: 1073 GVNENGLQPLYSVSLTDGTPPGTAVIRVRATDADADLQTNGNVTYRLGSHQNQFTIDKLT 1132
Query: 170 GEL--LLTGDPPSDDVEYELTVEAHDLQSP 197
G + L+T D + EY L V A D +P
Sbjct: 1133 GSISTLVTMDRARSESEYNLLVVATDDGTP 1162
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 70/167 (41%), Gaps = 37/167 (22%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVA------QYSLVI 81
VRY+I GND+ F + +P + V LV IDRE++ ++ L I
Sbjct: 173 VRYTILSGNDDGYFTM-DPLDGD----------VFLVRQ--IDREQLPGSAVGDRFVLTI 219
Query: 82 TAT---DVKGINKAETHVTVDVLDENDNSPVFSQKVYRF-IVGDLKSSLNSNVSHWKKFS 137
A ++ + + +D+ D NDN P F Y IV +L + +
Sbjct: 220 QAASSLEISSATSSRARIFIDIEDINDNLPAFDTNDYTISIVENLPINFH---------- 269
Query: 138 SIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD 181
+ +SATD D + Y+L S +I P TG L +T P D
Sbjct: 270 -VLQLSATDNDLGENSRFTYRLNDTSGAFMIDPVTGWLSVTNSTPLD 315
>gi|269914102|ref|NP_001013032.2| protocadherin beta-5 precursor [Pan troglodytes]
Length = 795
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 52/103 (50%), Gaps = 14/103 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 402 LVTQRTLDRESQAEYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN 161
S IGSVSATD D +V Y L P N
Sbjct: 462 NNSPA----------LQIGSVSATDRDSGTNAQVTYSLLPPQN 494
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + SL +TA D ++ T + + VLD NDN+P F Q +Y V +
Sbjct: 194 LVLDKALDREERPELSLTLTALDGGAPPRSGTTTIRIVVLDNNDNAPEFLQSLYEVQVPE 253
Query: 122 LKSSLNSNV----SHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLL 174
S +NS V + + GSV+ GD+V VI +TGE+ L
Sbjct: 254 -NSPINSLVVVVSARDLDAGAYGSVAYALFQGDEVTQPF-------VIDEKTGEIRL 302
>gi|269914099|ref|NP_001013028.2| protocadherin beta 16 precursor [Pan troglodytes]
Length = 776
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ +T TD+ K E ++TV + D NDN+P F+Q Y V +
Sbjct: 403 LVTERALDREARAEYNITLTVTDMGTPRLKTEHNITVQISDVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 LFALRSLDYEALQAFEFRVGATDRGSPA 540
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 22/154 (14%)
Query: 49 HEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNS 107
HE R+ + L+ ++DREE Q L +TA D ++ T V ++V+D NDN+
Sbjct: 183 HEFRDGRKYPE---LMLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNA 239
Query: 108 PVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP----S 160
P F Q +Y+ + + NS + S + +VSA D DG K++Y L P S
Sbjct: 240 PEFEQPIYKVQIPE-----NSPLG-----SLVATVSARDLDGGANGKISYTLFQPSEDIS 289
Query: 161 NLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHD 193
+ + P TGE+ L + V YE+ ++A D
Sbjct: 290 KTLEVNPMTGEVRLRKQVDFEMVTSYEVRIKATD 323
>gi|432104085|gb|ELK30915.1| Protocadherin Fat 4 [Myotis davidii]
Length = 2711
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 85/185 (45%), Gaps = 40/185 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+ YS+ +GN+ FA+ +S SG V L+ G +D E YSLVI A D
Sbjct: 1244 LIHYSVVKGNEERQFAI------------DSTSGQVTLI--GKLDYEATPAYSLVIQAVD 1289
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
++ T + +D+LDENDN+P F KS+L +V + + SV+
Sbjct: 1290 SGAVSLNSTCTLNIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVT 1338
Query: 144 ATDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
ATD+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1339 ATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQ 1395
Query: 195 QSPSR 199
P R
Sbjct: 1396 GRPPR 1400
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 39/53 (73%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ Y+L + ATD KG + T VTV VLD NDN+PVF+Q +Y+
Sbjct: 2037 TGELDREEVSNYTLTVVATD-KGHPSLSSSTEVTVMVLDINDNNPVFAQALYQ 2088
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 82/189 (43%), Gaps = 28/189 (14%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVL-LVTSGDIDREEVAQYSLVITATDVKG 88
Y I QGN+ F L +I + + L LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIVQGNEEGRFRL------DITLNPSGEGAFLHLVSEGGLDREVTPQYQLLVEVKD-KG 226
Query: 89 INKAETH--VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
K + V V V D NDN PVF Y+ V + SS+ V+A D
Sbjct: 227 EPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE----------DAAVGSSVLQVAAAD 276
Query: 147 AD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSPSRY 200
AD + Y+L I P+TG L+T P D +Y LTV+A D PS
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQIDPETG--LITVREPLDFEARRQYSLTVQALDRGVPSLT 334
Query: 201 AREPAQVWL 209
R A + L
Sbjct: 335 GRAEALIQL 343
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
++YSI+ G+ + R ++SGV+ T +DREE Y L + ATD
Sbjct: 724 IKYSISAGDRS-------------RFQVNAQSGVI-STRMALDREEKTAYQLQVVATDGG 769
Query: 88 GINKA-ETHVTVDVLDENDNSPVFSQKVYRFI----------VGDLKSS---LNSNVSHW 133
+ + VT+ VLD DN PVFSQ Y F+ VG + +S LN+N+S+
Sbjct: 770 NLQSPNQAVVTITVLDTQDNPPVFSQAAYSFVVFENVALGYHVGSVSASTMDLNANISYL 829
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 70/174 (40%), Gaps = 29/174 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ T L T IDREE + Y L + A+
Sbjct: 826 ISYLITTGDQKGMFAINQVTGQ-------------LTTGSVIDREEQSFYQLKVVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V D NDNSP F Q V S+N V +W+ SI A D
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAV---------ESVNV-VENWQAGHSIFQAKAVDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSP 197
D V Y L P NL I + G + L G Y+L + A D+ P
Sbjct: 921 DEGVNGMVLYSLKQNPKNLFTINEKDGHVSLLGPLDVHAGSYQLEILASDMGVP 974
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 16/93 (17%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ LV Y+I G D+ +F + + +SG L+ T +DRE ++YSL++ A
Sbjct: 1728 NALVTYTIISGADD-SFRI------------DPESGDLIATK-RLDRERRSKYSLLVRAD 1773
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
D G+ ++ + + V D ND+SP FS+ VY F
Sbjct: 1774 D--GLQSSDMRINITVSDVNDHSPKFSRPVYSF 1804
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 14/86 (16%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN H+F++ + T EIR+ +DRE+V+QY L I +
Sbjct: 2629 PNGQLDYDIVNGNKEHSFSIDH-ATGEIRSIRP------------LDREKVSQYVLTIKS 2675
Query: 84 TDVKGINKAET-HVTVDVLDENDNSP 108
+D +++ + V + +LDENDN+P
Sbjct: 2676 SDKGSPSQSSSVEVIIHILDENDNAP 2701
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 16/115 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + + A + + VRY I GN N F + +S +G
Sbjct: 2093 ENTLTGTDI--IQVYAADGDEGTNGQVRYGIVDGNANQEFRI------------DSVTGA 2138
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
+ V + +DRE+ YSL + ATD + +T V++ +LD ND P+F Y
Sbjct: 2139 ITV-AKPLDREKTPVYSLTVQATDRGSTPRTDTATVSIVLLDSNDFVPIFELSPY 2192
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 37 DNHT--FALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE- 93
DN T F+L+ T + + SG L S +DREE + YSL++ ATD+ ++
Sbjct: 614 DNGTVRFSLQEAETDQRSFRLDPVSGRLSTISS-LDREEQSFYSLLVLATDLGSPPQSSV 672
Query: 94 THVTVDVLDENDNSPVF 110
+ V +LD NDNSPVF
Sbjct: 673 ARINVSLLDMNDNSPVF 689
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 31/176 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y + GN++ F L S SG L VT +DRE + L++TATD
Sbjct: 2223 LSYVLFGGNEDSAFTL-------------SDSGELRVTQS-LDRETKEHFVLIVTATD-S 2267
Query: 88 GINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G T++V+ D NDN P F+ K+Y + + + + V+A+
Sbjct: 2268 GSPALTGTGTINVIVDDVNDNVPTFASKLYFTTIPE----------DAPTGTDVLLVNAS 2317
Query: 146 DADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSP 197
DAD ++Y++ ++ I P TG+++ + + E Y L V + D SP
Sbjct: 2318 DADTSTNAVISYRIIGGNSQFTINPSTGQIITSALLDRETRENYTLVVVSSDAGSP 2373
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 27/123 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI +GN F + G L + S ++DRE +Y L++ A+D +
Sbjct: 1031 IAYSIAEGNIGDAFGIF-------------PDGQLYIKS-ELDRELQDRYVLLVVASD-R 1075
Query: 88 GIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ A +VTV + D NDN P+F+ Y F + K S +G VSA
Sbjct: 1076 AVEPLSATVNVTVILEDVNDNRPLFNSTNYSFYFEE----------EQKAGSFVGKVSAV 1125
Query: 146 DAD 148
D D
Sbjct: 1126 DKD 1128
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 30/156 (19%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN++ GT V L + A S + + I GN+ F E+++S +
Sbjct: 369 ENAQVGTVVALLTVTDADS-PAANGNISVQILAGNEQRHF--------EVQSSKVPNLSL 419
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN--------KAETHVTVDVLDENDNSPVFSQK 113
+ V S +DRE + Y+L ++ +D G + + + V D ND+ PVF+Q+
Sbjct: 420 IKVASA-LDRERIPSYNLTVSVSDNYGAPPAAAVRARSSVASLVIFVNDINDHPPVFAQQ 478
Query: 114 VYRFIVGDLKSSLNSNVS-HWKKFSSIGSVSATDAD 148
VYR N+S S + VSATD D
Sbjct: 479 VYRV-----------NLSEEAPPGSYVSGVSATDGD 503
>gi|431899688|gb|ELK07642.1| Protocadherin Fat 4 [Pteropus alecto]
Length = 2137
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 35/193 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
++RYSI+ GN+ FA+ S +GVL + +D E ++ + ++ATD
Sbjct: 1468 VIRYSISSGNEGGVFAIN------------SSTGVLTLAKA-LDYELCQKHEMTVSATDG 1514
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + VTV+V+D NDNSPVF Y L + + + +++ ++AT
Sbjct: 1515 GWVARTGYCSVTVNVIDVNDNSPVFLPDEY----------LPTVLENAPSGTTVIHLNAT 1564
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
DAD +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 1565 DADSGTNAVIAYAVQSSDSDLFVIDPNTGVITTQG---FLDFETKQSYHLTVKAFNVPDE 1621
Query: 198 SRYAREPAQVWLQ 210
R + + L+
Sbjct: 1622 ERCSFATVNIQLK 1634
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 50/91 (54%), Gaps = 16/91 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN H+F++ N T EIR+ +DRE+++QY L I +
Sbjct: 1044 PNGQIDYEIVNGNKEHSFSI-NHATGEIRSIRP------------LDREKISQYVLTIKS 1090
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQ 112
+D KG T V V ++LDENDN+P FSQ
Sbjct: 1091 SD-KGSPSQSTSVKVIINILDENDNAPKFSQ 1120
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 99 GDGSKIMQLTAMDADEGANALVTYTIISGADD-SFRI------------DPESGDLIATR 145
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND+SP FS+ VY F
Sbjct: 146 -RLDRERRSKYSLLVRADD--GLQSSDMRINITVSDVNDHSPKFSRPVYSF 193
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 77/178 (43%), Gaps = 35/178 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y + GN+++ F L S G L VT +DRE ++ L ITATD
Sbjct: 638 LSYVLVGGNEDNAFTL-------------SAGGELRVTRS-LDRETKERFVLTITATDSG 683
Query: 88 G---INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
HV VD D NDN P F+ K+Y V + + + V+A
Sbjct: 684 SPALTGTGTVHVVVD--DANDNIPTFASKMYFTAVPE----------DAPTGTDVLLVNA 731
Query: 145 TDADGDK---VAYKLAVPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSP 197
+DAD ++Y++ ++ I P TG+++ + D + D Y L V A D SP
Sbjct: 732 SDADASTNAVISYRIIGGNSQFTINPSTGQIITSALLDRETKD-NYTLVVVASDAGSP 788
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 65/153 (42%), Gaps = 37/153 (24%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ +GT V L + + + + ++ Y I GN T NP+T +I
Sbjct: 718 EDAPTGTDV--LLVNASDADASTNAVISYRIIGGNSQFTI---NPSTGQI---------- 762
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+TS +DRE Y+LV+ A+D + T V V V D NDN P F Y
Sbjct: 763 --ITSALLDRETKDNYTLVVVASDAGSPEPLSSSTSVLVTVTDVNDNPPRFQHHPY---- 816
Query: 120 GDLKSSLNSNVSHWKKFSSIGS----VSATDAD 148
V+H +S GS V+ TDAD
Sbjct: 817 ----------VTHIPSTTSPGSFVFAVTVTDAD 839
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYR 116
+G++DRE V+ Y+L + ATD KG + V V VLD NDNSP F+Q +YR
Sbjct: 452 TGELDREAVSNYTLTVLATD-KGQPALSSSAEVVVVVLDINDNSPAFAQALYR 503
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 35/177 (19%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKV 114
K+G + V SG +DRE+ + SL + A + ++G + E V + VLD ND P+FS V
Sbjct: 1696 KTGQIYV-SGLLDREKEERVSLKVLAKNFGSIRGADVDEVTVNITVLDAND-PPIFSLTV 1753
Query: 115 YRFIVGD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLV 163
Y + + S+ +S+ V W +FS IGS + A
Sbjct: 1754 YSVQISEGVPMGTHVTFVSAFDSDSVPSWSRFSYFIGSGNENGA---------------F 1798
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
I PQTG++ +T + + + Y LTV A D +PS V L+ N PVL
Sbjct: 1799 SIHPQTGQITVTAELDRETLPVYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPVL 1855
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 99/244 (40%), Gaps = 46/244 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+V S ++RE+ +Y + ++A D T VT+ V D NDN+P FS+ Y +L
Sbjct: 1172 IVISRPLNREDTDRYRIRVSAHDSGW--TVSTDVTIFVTDVNDNAPRFSRPSYYLDCPEL 1229
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELL------ 173
S + S V+ VSATD D +V Y + S I TGE+
Sbjct: 1230 -SEIGSKVTQ---------VSATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFSKQVLK 1279
Query: 174 ---LTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSE 230
++G + + V + D +PS + + ++D
Sbjct: 1280 YQNVSGFSNVNINRHSFIVTSSDRGNPSLLSETTVTI---------------NIVDSNDN 1324
Query: 231 APHRIEKRR---VTRAVR-PTKRIDFSETDGE---MEGRIVFALEKETEREKFKIRDENP 283
AP ++ + VT+ V+ TK I + D + + + + + E KFK+ +
Sbjct: 1325 APQFLKMKYFTPVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFVSGENHSGKFKLDNNTG 1384
Query: 284 WITV 287
WI+V
Sbjct: 1385 WISV 1388
>gi|66773244|ref|NP_001019356.1| protocadherin 2 gamma 13 precursor [Danio rerio]
gi|51557419|gb|AAU06396.1| protocadherin cluster 2 gamma 13 [Danio rerio]
Length = 963
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G++DRE +++Y++ ITATD + T ++ + V D NDN PVF Q+ YR V +
Sbjct: 403 LVTTGELDRELLSEYNITITATDEGSPPLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ K SSI SVSATD D
Sbjct: 463 ----------NNKAGSSICSVSATDPD 479
Score = 44.7 bits (104), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV + ++DR + + +L++TA D ++ T + V VLD NDN+PVFSQ VY+ + +
Sbjct: 193 LVLNKELDRRKEKEVNLILTAVDGGTPPRSGTVAIHVTVLDANDNAPVFSQAVYKVSLPE 252
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
NS V + + +VSATDAD
Sbjct: 253 -----NSPVD-----TVVVTVSATDAD 269
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 14/144 (9%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
K+GV+ + G +D EE A +SL I A D G+ + ++V + V D NDNSP+
Sbjct: 296 KTGVISI-KGPVDFEEEATFSLRIIAKDGSGLT-SYSNVLISVSDVNDNSPI-------I 346
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVIVPQTGELLL 174
IV L + + + I +V D++ + + + + VP LV + L+
Sbjct: 347 IVKSLNIPIPESALPGTEVGII-NVQGRDSENNGQVRCSIQQNVPFKLVPSIKNYYSLVT 405
Query: 175 TGDPPSDDV-EYELTVEAHDLQSP 197
TG+ + + EY +T+ A D SP
Sbjct: 406 TGELDRELLSEYNITITATDEGSP 429
>gi|194579017|ref|NP_001124125.1| uncharacterized protein LOC100170818 precursor [Danio rerio]
gi|190339328|gb|AAI62541.1| Zgc:193751 protein [Danio rerio]
Length = 945
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G++DRE +++Y++ ITATD + T ++ + V D NDN PVF Q+ YR V +
Sbjct: 403 LVTTGELDRELLSEYNITITATDEGSPPLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ K SSI SVSATD D
Sbjct: 463 ----------NNKAGSSICSVSATDPD 479
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV + ++DRE+ + +L++TA D ++ T + V VLD NDN+PVFSQ VY+ + +
Sbjct: 193 LVLNKELDREKEKEVTLILTAVDGGTPPRSGTVAIHVTVLDANDNAPVFSQAVYKVSLPE 252
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
NS V + + +VSATDAD
Sbjct: 253 -----NSPVD-----TVVVTVSATDAD 269
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 20/147 (13%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
K+GV+ + G +D EE A +SL I A D G+ + ++V + V D NDNSP+ K
Sbjct: 296 KTGVISI-KGPVDFEEEATFSLRIIAKDGSGLT-SYSNVLISVSDVNDNSPIIIVK---- 349
Query: 118 IVGDLKSSLNSNVSHWKKFS-SIGSVSATDADGD-----KVAYKLAVPSNLVVIVPQTGE 171
SLN + +G ++ D D + + + + VP LV +
Sbjct: 350 -------SLNIPIPESALPGIEVGIINVQDRDSENNGQVRCSIQQNVPFKLVPSIKNYYS 402
Query: 172 LLLTGDPPSDDV-EYELTVEAHDLQSP 197
L+ TG+ + + EY +T+ A D SP
Sbjct: 403 LVTTGELDRELLSEYNITITATDEGSP 429
>gi|144853543|gb|AAI12398.1| Pcdhb10 protein [Mus musculus]
Length = 796
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 104/250 (41%), Gaps = 39/250 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ I+ TD+ H +TV V D NDN+P F++ Y + +
Sbjct: 401 LVTEGTLDRESKAEYNITISVTDLGTPRLTTQHTITVQVSDINDNAPTFTRTSYTMFIRE 460
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVP-------SNLVVIVPQTGE 171
NS H IG++SATD+D + Y L P ++LV I G+
Sbjct: 461 ----NNSPALH------IGTISATDSDAGSNAHITYSLLPPHDPQLTLTSLVSINEDNGQ 510
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQD---EQLLQMIDR 227
L + + +E V A D SP+ ++ V VL D E + +
Sbjct: 511 LFALRALDYEALRAFEFHVRATDRGSPALSSQALVLVV------VLDDNDNEPFVLYPLQ 564
Query: 228 KSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
S AP + R A ++ + D + F L K TE F + W
Sbjct: 565 NSSAPCKELVPRAAEAGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFSV-----WA-- 617
Query: 288 DENGDVRVKK 297
NG+VR +
Sbjct: 618 -HNGEVRTTR 626
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 17/121 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + +L++TA D ++ T V ++V+D NDN+P F Q +Y + +
Sbjct: 193 LVLDRALDREEQPELTLILTALDGGAPPRSGTTEVHIEVVDINDNAPQFIQSLYEVQILE 252
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNL---VVIVPQTGELLLT 175
S L++ V+ +VSA D D KVAY L + VI TGE+ L
Sbjct: 253 -NSPLDALVA---------TVSARDLDAGIYGKVAYSLFQDDGISQPFVIDEITGEIRLK 302
Query: 176 G 176
G
Sbjct: 303 G 303
>gi|426243623|ref|XP_004015650.1| PREDICTED: cadherin-3 [Ovis aries]
Length = 794
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 15/131 (11%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE V +Y+L I ATD+
Sbjct: 215 VVAYSI------HSQEPKDP--HDLMFTVHRSTGTISVISSGLDRERVPEYTLTIHATDM 266
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G + T + V++LD NDN+PVF + Y V + + VSH + ++ + A
Sbjct: 267 DGDGSSTTAMAIVEILDANDNAPVFDPQKYEARVPE------NTVSHEVQRLTVTDLDAP 320
Query: 146 DADGDKVAYKL 156
++ + Y++
Sbjct: 321 NSPAWRATYRI 331
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DRE++A+Y L A G + + ++++ V D+ND+ P F+Q
Sbjct: 122 AIEKETGWLLLNKP-LDREKIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQ 180
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
V+R V L+ L +S+ V+ATD D
Sbjct: 181 DVFRGSV--LEGVLPG--------TSVMQVTATDED 206
>gi|403272515|ref|XP_003928104.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Saimiri
boliviensis boliviensis]
Length = 2899
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 115/264 (43%), Gaps = 62/264 (23%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
H + Y I GN+ F L E +GVL + +D EE+ +++L + A+
Sbjct: 2226 HAEIIYHIISGNEKGHFYL------------EENTGVLYLIK-PLDYEEMTKFTLTVQAS 2272
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
D + + + V V+VLD+ND++P F + +V + N VS S+I S+SA
Sbjct: 2273 DAEKKHFSFAVVFVNVLDDNDHAPQFMFSSFSCVVPE-----NLPVS-----STICSISA 2322
Query: 145 TDADG---DKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDV------------EYELTV 189
D D ++ Y + P L+ + +L L DP + D+ +Y LTV
Sbjct: 2323 LDFDAGPYGELTYSIVSPCLLIHGMSYNHDLFLI-DPLTGDIHAKQILDYENGNKYCLTV 2381
Query: 190 EAHDLQSPSRYAREPAQVWL------QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA 243
+A D A VW+ +F QD+ L + P + + R++
Sbjct: 2382 QAKDKGD----ATASLVVWVDIEGIDEFEPIFTQDQYLFTL-------PEKNKDRQL--- 2427
Query: 244 VRPTKRIDFSETDGEMEGRIVFAL 267
R++ S+ D ++G I+++L
Sbjct: 2428 ---LGRVEASDADAGIDGVILYSL 2448
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 73/142 (51%), Gaps = 14/142 (9%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH 95
N F+ + + + + +GV+++ +D EEV +Y L+I +D +++ E
Sbjct: 1905 NSAFIFSFAKESNPGAKFAIDPNTGVVVLVK-TLDFEEVTEYRLLIQISD--SVHRTEGA 1961
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD-KVAY 154
+ V VLD NDN PVFSQ+ Y+ V + + V + S+ +VSATD + + ++Y
Sbjct: 1962 LVVRVLDVNDNLPVFSQEFYQVTVPE-----SIPVGY-----SVLTVSATDLENNANISY 2011
Query: 155 KLAVPSNLVVIVPQTGELLLTG 176
++ S I P+ G + TG
Sbjct: 2012 RILSSSKEFSIDPKNGTIFTTG 2033
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 16/90 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
+ YSI GN+N F L +S LL T+ +D E Q+ L + A D
Sbjct: 1183 ITYSILSGNENMVFMLD-------------ESSGLLTTTCPLDYEMKTQHILTVLALDDG 1229
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVY 115
++ ++T +T+ VLD ND +PVF Q++Y
Sbjct: 1230 TPALSSSQT-LTITVLDVNDEAPVFKQQLY 1258
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 19/115 (16%)
Query: 63 LVTSGDIDRE-EVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+ S DIDRE + A Y L++ A D G++ A+ V VD+ D NDN PVF+ Y
Sbjct: 118 ICVSQDIDRERDSATYDLLVKAKDGGGLS-AQAFVRVDLEDVNDNHPVFNPSTY------ 170
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP---SNLVVIVPQTG 170
+ S + S I +V ATD D VAY+L +P S+L ++ TG
Sbjct: 171 ----VTSISGQTQPGSEIINVLATDRDSGIYGTVAYEL-IPGDVSSLFIVDSTTG 220
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 56/126 (44%), Gaps = 22/126 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI GN + F ++ T+ I + K LV +DRE A + + I A+D
Sbjct: 2114 VEYSIISGNLQNNFHVE---TNFIHSEYPYKQVAYLVLLHSLDREASASHEIAILASDSG 2170
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS----V 142
+ T V ++ VLD NDN P FS Y +H K+ + +GS V
Sbjct: 2171 CPPLSATAVISIQVLDVNDNPPNFSSLSYH--------------THVKESTPLGSHITVV 2216
Query: 143 SATDAD 148
SA D D
Sbjct: 2217 SANDRD 2222
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I GN + FA+ + S E L T+ +DRE+V+ ++L I +D+
Sbjct: 1392 VEYHIIDGNTDEYFAIN-------KMSGE------LSTTRALDREQVSNFTLAILCSDLG 1438
Query: 88 GINKAET-HVTVDVLDENDNSPVFSQKVYR 116
++ H+ V VLD ND+SP F Y+
Sbjct: 1439 EPPRSSVIHLQVRVLDANDHSPSFPTPYYQ 1468
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 16/86 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+ YSI GN F + ++ SGV+ T+ +D E + YSL++ ATD
Sbjct: 1805 LIEYSILSGNQEEAFQI------------DALSGVI-TTNVILDYELTSSYSLIVQATD- 1850
Query: 87 KGINKAE--THVTVDVLDENDNSPVF 110
KG+ + T + + V D NDN+P F
Sbjct: 1851 KGMPRLSNTTVIKIQVTDINDNAPAF 1876
Score = 37.4 bits (85), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 64/148 (43%), Gaps = 28/148 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN ++GT + + S + ++YSI GN++ +L S SG
Sbjct: 1679 ENCEAGTSIVTVKAFAPDSIQDS---MKYSIFSGNEDGVLSLC------------SNSGQ 1723
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L V EV +I + G ++A + V V + D NDNSP F Q +Y+
Sbjct: 1724 LTVKEPKFLDFEVRNEVQLIVLAESSG-HRAYSKVAVLIQDMNDNSPCFEQSIYQ----- 1777
Query: 122 LKSSLNSNVSHWKKF-SSIGSVSATDAD 148
++VS + + +SI V ATD D
Sbjct: 1778 ------ASVSEGQFYNASIIQVFATDLD 1799
>gi|426350316|ref|XP_004042724.1| PREDICTED: protocadherin beta-18-like isoform 1 [Gorilla gorilla
gorilla]
Length = 788
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 80/174 (45%), Gaps = 32/174 (18%)
Query: 37 DNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETH 95
DN F LK PT K+ LVT +DRE +Y++ IT TD+ K E +
Sbjct: 388 DNLPFVLK-PTF---------KNFYALVTEHPLDREVRNEYNITITVTDLGTPRLKTEHN 437
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KV 152
+TV V D NDN+P+F+Q Y V + NS H IGSVSATD D +V
Sbjct: 438 ITVLVSDVNDNAPIFTQTSYTLFVRE----NNSPALH------IGSVSATDRDSGTNAQV 487
Query: 153 AYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPS 198
Y L P ++LV I G L + + E+E V A D SP+
Sbjct: 488 TYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYESLQEFEFRVGAADHGSPA 541
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 35 GNDNHTFALKNPTTH-EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA- 92
G N+T + NP H ++R+ E + LV +DRE+ ++ SL +TA D ++
Sbjct: 166 GVQNYTIS-PNPHFHLKLRDGDEGRKYPELVLDQSLDREKESELSLTLTAVDGGSPPRSG 224
Query: 93 ETHVTVDVLDENDNSPVFSQKVY 115
T + V VLD NDN+P F + VY
Sbjct: 225 TTLINVVVLDINDNAPEFEKPVY 247
>gi|66773258|ref|NP_001019349.1| protocadherin 2 gamma 5 precursor [Danio rerio]
gi|51557473|gb|AAU06422.1| protocadherin cluster 2 gamma 5 [Danio rerio]
Length = 935
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G++DRE +++Y++ ITATD + T ++ + V D NDN PVF Q+ YR V +
Sbjct: 392 LVTTGELDRELLSEYNITITATDEGSPPLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 451
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ K SSI SVSATD D
Sbjct: 452 ----------NNKAGSSICSVSATDPD 468
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 87/177 (49%), Gaps = 38/177 (21%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET---HVTVDVLDENDNSPVFSQKVYRFIV 119
LV + ++DRE+ + +L++TA D ++ T HVTV LD NDN+PVFSQ VY+ +
Sbjct: 182 LVLNKELDREQQKEVTLILTAVDGGTPPRSGTVAIHVTV--LDANDNAPVFSQAVYKVSL 239
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPS----NLVVIVPQTGEL 172
+ NS V + + +VSATDAD +V Y+ + S L VI +G +
Sbjct: 240 PE-----NSPVD-----TVVVTVSATDADEGQNGEVTYEFSHLSQKVMQLFVIDSVSGVI 289
Query: 173 LLTGDPPSD---DVEYELTVEAHDLQSPSRYA-----------REPAQVWLQFNSPV 215
LTG P D + EL ++A D Q S Y+ P + NSPV
Sbjct: 290 KLTG--PVDYEKEKTIELPIQAKDGQGLSSYSTVLIDIIDINDNAPMVILKSLNSPV 344
>gi|348582123|ref|XP_003476826.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 4-like [Cavia
porcellus]
Length = 4819
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 85/185 (45%), Gaps = 40/185 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+ YS+ +GN+ FA+ +S SG V L+ G +D E YSLVI A D
Sbjct: 1244 LIHYSVIKGNEERQFAI------------DSTSGQVTLI--GKLDYEATPTYSLVIQAVD 1289
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
I+ T + +D+LDENDN+P F KS+L +V + + SV+
Sbjct: 1290 SGTISLNSTCTLNIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVT 1338
Query: 144 ATDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
ATD+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1339 ATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQ 1395
Query: 195 QSPSR 199
P R
Sbjct: 1396 GRPPR 1400
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
VRYSI+ G+ + R ++SGV+ T +DREE Y L I ATD
Sbjct: 724 VRYSISAGDRS-------------RFQINAQSGVI-STRIALDREEKTAYQLQIVATDGG 769
Query: 88 GINKA-ETHVTVDVLDENDNSPVFSQKVYRFI----------VGDLKSS---LNSNVSHW 133
+ + VTV VLD DN PVFSQ Y F+ VG + +S LNSN+S+
Sbjct: 770 NLQSPNQAIVTVTVLDTQDNPPVFSQAAYSFVVFENVALGYHVGSVSASSMDLNSNISYL 829
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 89/193 (46%), Gaps = 35/193 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
LVRYSI+ GN+ FA+ S +GVL++ +D E ++ + I ATD
Sbjct: 3125 LVRYSISAGNEEGIFAIN------------SSTGVLVLAKA-LDYELCQKHEITIRATDG 3171
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + VT++V+D NDNSPVF Y V + + +++ ++AT
Sbjct: 3172 GWVARTGYCSVTINVIDVNDNSPVFVPDEYFPTV----------LENAPSGTTVIHLNAT 3221
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
D D +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 3222 DVDSGTNAVIAYSIQSSDSDLFVIDPNTGIITTQG---FLDFETKQSYHLTVKAFNVPDE 3278
Query: 198 SRYAREPAQVWLQ 210
R + + L+
Sbjct: 3279 ERCSFATVNIQLK 3291
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ Y+L + ATD KG + T V V VLD NDN+PVF+Q +Y+
Sbjct: 2109 TGELDREEVSNYTLTVVATD-KGQPPLSSSTEVVVMVLDINDNNPVFAQALYK 2160
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 39/180 (21%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN ++F++ N T EIR+ +DRE+V+ Y L I +
Sbjct: 2701 PNGQLDYEIVNGNKENSFSI-NHATGEIRSIRP------------LDREKVSHYMLTIKS 2747
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D KG T V V ++LDENDN+P FSQ +H + S +G
Sbjct: 2748 SD-KGSPSQSTSVKVIINILDENDNAPRFSQIF---------------SAHVPENSPLGY 2791
Query: 142 V--SATDADGDKVA-----YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
+ T +D D A Y L S I P TG+++++ +D + Y + V AHD
Sbjct: 2792 IVTRVTTSDEDIGANAVSRYSLMDTSLPFTINPNTGDIIISRPLNREDTDRYRIRVSAHD 2851
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVF 110
L T +DREE A YSL++ ATD+ ++ TH+ V +LD NDNSPVF
Sbjct: 641 LSTISSLDREEQAFYSLLVLATDLGSPPQSSVTHINVSLLDMNDNSPVF 689
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1754 GDGSKIMQLTAMDADEGANALVTYTIISGADD-SFRI------------DPESGDLIATK 1800
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND++P FS+ VY F
Sbjct: 1801 -RLDRERRSKYSLLVRADD--GLQSSDMRINITVSDVNDHTPKFSRPVYSF 1848
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 81/194 (41%), Gaps = 38/194 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I +GN+ F L N + + + LV+ G +DRE Y L++ D KG
Sbjct: 174 YRIIRGNEAGRFRLD-----ITLNPSGEGAFLHLVSKGGLDREVTPNYQLLVEVED-KGE 227
Query: 90 NKAETH--VTVDVLDENDNSPVFSQKVYRF------IVGDLKSSLNSNVSHWKKFSSIGS 141
K + V V V D NDN PVF Y+ +VG SS+
Sbjct: 228 PKRRGYLQVNVTVQDINDNPPVFGSSHYQXGVPEDAVVG----------------SSVLQ 271
Query: 142 VSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQ 195
V+A DAD + Y+L + P+TG L+T P D +Y LTV+A D
Sbjct: 272 VAAADADEGTNADIRYRLQDEGTPFHMDPETG--LITVREPLDFEARRQYSLTVQAVDRG 329
Query: 196 SPSRYAREPAQVWL 209
PS R A + L
Sbjct: 330 VPSLIGRAEALIQL 343
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 14/114 (12%)
Query: 3 NSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL 62
N + TG L + A + + VRY I GN N F + +S +G +
Sbjct: 2164 NEDTLTGTDILQVFAADGDEGTNGQVRYGIVDGNTNQEFRI------------DSVTGAI 2211
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
V +DRE++A Y L + A D + +T V++ +LD ND P+F Y
Sbjct: 2212 TVAK-PLDREKIATYLLTVQAADRGSTPRTDTSTVSIVLLDINDFVPIFELSPY 2264
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 30/151 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y + GN++ F L S SG L VT +DRE + LVITATD
Sbjct: 2295 LSYVLLGGNEDQAFTL-------------SASGELRVTQ-SLDRETKEHFVLVITATD-S 2339
Query: 88 GINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G T++V+ D NDN P F K+Y + + + + V+A+
Sbjct: 2340 GSPALTGTGTINVIVDDVNDNVPTFGSKMYFTTIPE----------DAPTGTDVLLVNAS 2389
Query: 146 DADGDK---VAYKLAVPSNLVVIVPQTGELL 173
DAD ++Y + ++ I P TG+++
Sbjct: 2390 DADASTNAVISYSIIGGNSQFTINPSTGQII 2420
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN++ GT V L + A S + + I GN+ F E++ S +
Sbjct: 369 ENAQVGTVVALLTVTDADS-PAANGNISVQILGGNEQRHF--------EVQRSKVPNLSL 419
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAE--------THVTVDVLDENDNSPVFSQK 113
+ V S +DRE + Y+L ++ +D G A + + V D ND+ PVF+Q+
Sbjct: 420 IKVASA-LDRERIPSYNLTVSVSDNYGAPPAAEVRARSSVASLVIFVNDINDHPPVFAQQ 478
Query: 114 VYRFIVGDLKSSLNSNVS-HWKKFSSIGSVSATDAD 148
VYR N+S S + VSATD D
Sbjct: 479 VYRV-----------NLSEEAPPGSYVSGVSATDGD 503
>gi|326673405|ref|XP_003199876.1| PREDICTED: protocadherin beta-16-like [Danio rerio]
Length = 802
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 134/300 (44%), Gaps = 48/300 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E+SKSGT V L V S + V+ SI NDN F+LK+ +
Sbjct: 353 EDSKSGTVVTMLN--VQDSDSGENGKVQCSI---NDNMPFSLKSTNNNFFS--------- 398
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
LVT GD+DRE ++Y++ +T D +G+ + +++ + D NDN+PVF Q Y
Sbjct: 399 -LVTDGDLDRERESEYNISVTCAD-EGVPSLSSSVTLSLQISDVNDNAPVFEQSSY---- 452
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKL------AVP-SNLVVIVPQT 169
++S+ N + SI +V A DAD + +V+Y L VP S+LV + +
Sbjct: 453 ---QASVQENNTPGL---SIFTVRARDADFNQNARVSYILEDSSVNGVPVSSLVSVTADS 506
Query: 170 GELLLTGDPPSDDV-EYELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQLLQMI 225
G + + + E++ V+A D SP + ++ +Q N+P Q+L +
Sbjct: 507 GVIHAVRSFDYEQIKEFQFRVKAQDGGSPPLSSNASVKILIQDQNDNAP-----QVLYPV 561
Query: 226 DRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWI 285
+ I R TK + + D + + L K T+R F++ +N I
Sbjct: 562 QSGASVVAEIVPRSADVGYLVTKVVAV-DVDSGQNAWLSYKLHKATDRALFEVGAQNGEI 620
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 78/168 (46%), Gaps = 25/168 (14%)
Query: 46 PTTHEIRNSTESKSG---VLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVL 101
P H I + + G V ++ +DRE+ SLV+TA D + T + + V
Sbjct: 169 PADHFILKTQDMPDGTKNVEMILQKPLDREKQEHISLVLTAVDGGDPQLSGTIPIIITVE 228
Query: 102 DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV 158
D NDN+P+ VY+ V + + K + + +V A+DAD KV Y +A
Sbjct: 229 DANDNAPICFMSVYKTSVAE----------NSPKGTVLTTVKASDADQGQNGKVEYHIAK 278
Query: 159 PS----NLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYA 201
+ NL I G L L+GD + V+ Y++ V+A D P R++
Sbjct: 279 STGGTINLFEIDRNAGVLKLSGDIDYEKVKHYQIDVQARD---PGRHS 323
Score = 37.4 bits (85), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS 111
+GVL + SGDID E+V Y + + A D G + V VD++D NDN PV +
Sbjct: 293 AGVLKL-SGDIDYEKVKHYQIDVQARD-PGRHSDTCKVIVDIIDVNDNKPVIN 343
>gi|156361307|ref|XP_001625459.1| predicted protein [Nematostella vectensis]
gi|156212294|gb|EDO33359.1| predicted protein [Nematostella vectensis]
Length = 814
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 116/270 (42%), Gaps = 56/270 (20%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQ 112
+T S +GV+ +T+ ++DRE V QY++++ A D + A HV V+VLD NDN PVF+
Sbjct: 437 TTNSTTGVVSLTA-ELDRESVYQYNMLVVAQDGGSPPRTASAHVKVEVLDCNDNPPVFTT 495
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGS----VSATDAD------GDKVAYKL--AVPS 160
Y + +SIG+ VSA D D ++ Y L A+ S
Sbjct: 496 LYYTL--------------QLSEATSIGTRILRVSANDRDDKDEGVNAEIRYFLKDAIVS 541
Query: 161 NLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQ 220
I TG++ + V+Y E S +A + + L +S V
Sbjct: 542 KKFSINDTTGQITI-----KQAVDY----EERSSYSFEVFASDGGEARLTGSSSV----- 587
Query: 221 LLQMIDRKSEAPHRIEKRRVTRAVR------PTKRIDFSETDGEMEGRIVFALEKETERE 274
+ +ID P+ + R + V P ++ S+ D + G+++F++
Sbjct: 588 RITIIDVNDNRPYFLPTRYYVQLVENVAIGTPVTQVTASDLDSSLNGKVLFSILGGNSDG 647
Query: 275 KFKIRDENPWITVDENGDVRVKKRWDFEEL 304
KF I D+N G V K D+E++
Sbjct: 648 KFVI-DQN-------TGVVTTNKSLDYEDV 669
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 92/212 (43%), Gaps = 57/212 (26%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V +SI GN + F + + +GV+ T+ +D E+V +Y+LVI ATD
Sbjct: 636 VLFSILGGNSDGKFVI------------DQNTGVV-TTNKSLDYEDVTEYTLVIQATDCG 682
Query: 88 G--INKAETHVT-VDVLDENDNSPVFSQKVY---------------RFIVGDLKSSLNSN 129
+N ++ + V V++ NDNSPVFSQK+Y R DL SSLN
Sbjct: 683 DPPLNSSQPGMLHVSVVNINDNSPVFSQKMYSASIDENTTVGHVILRVTASDLDSSLNGK 742
Query: 130 VSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDV-EYELT 188
V + S+ ++DG K V N TG + +DV EY L
Sbjct: 743 V--------LFSILEGNSDG-----KFVVDQN-------TGVVTTNKSLDYEDVTEYTLV 782
Query: 189 VEAHDLQSPSRYAREPAQVWLQF-----NSPV 215
++A D P + +P + + NSPV
Sbjct: 783 IQATDCGDPPLNSSQPGMLHVSVVNINDNSPV 814
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 20/91 (21%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD---- 85
YSI GN+N +F + N T ++T + D E+ +Y+L I+ +D
Sbjct: 146 YSIQNGNNNGSFTIDNSTGE-------------IMTRKEFDFEKTERYNLTISVSDTGVP 192
Query: 86 -VKGINKAETHVTVDVLDENDNSPVFSQKVY 115
+ +N A +V + V+DENDN P F+QK Y
Sbjct: 193 ALSSLNFA--NVVIIVVDENDNPPEFAQKRY 221
>gi|397518012|ref|XP_003829194.1| PREDICTED: protocadherin beta-16 [Pan paniscus]
Length = 776
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ +T TD+ K E ++TV + D NDN+P F+Q Y V +
Sbjct: 403 LVTERALDREARAEYNITLTVTDMGTPRLKTEHNITVQISDVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 LFALRSLDYEALQAFEFRVGATDRGSPA 540
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 70/140 (50%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+ ++DREE Q L +TA D ++ T V ++V+D NDN+P F Q +Y+ + +
Sbjct: 194 LMLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVRIEVVDINDNAPEFEQPIYKVQIPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP----SNLVVIVPQTGELLL 174
NS + S + +VSA D D K++Y L P S + + P TGE+ L
Sbjct: 254 -----NSPLG-----SLVATVSARDLDSGANGKISYTLFQPSEDISKTLEVNPMTGEIRL 303
Query: 175 TGDPPSDDV-EYELTVEAHD 193
+ V YE+ ++A D
Sbjct: 304 REQVDFETVTSYEVDIKATD 323
>gi|195501765|ref|XP_002097933.1| GE10074 [Drosophila yakuba]
gi|194184034|gb|EDW97645.1| GE10074 [Drosophila yakuba]
Length = 1975
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 102/258 (39%), Gaps = 65/258 (25%)
Query: 3 NSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL 62
N SG VK I AS KH + Y + GN++ F + T
Sbjct: 1443 NENSGRDVKIGHIQAASRSKHNRDIFYYMLL-GNEDGAFYVDKLTGD------------- 1488
Query: 63 LVTSGDIDREEVAQYSLVITAT---------------DVKGINKAET--HVTVDVLDEND 105
+ T+ +DREE Y+L I A+ +K +N+ T V + VLD ND
Sbjct: 1489 IYTNKSLDREETDVYTLYILASIKADLHISEEERASFSIKTLNRDNTVAKVAITVLDVND 1548
Query: 106 NSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA-----------Y 154
N PVF + Y + +N+N K ++I V+ATDAD K A Y
Sbjct: 1549 NPPVFEKPTYY-------AGVNANA---KMGAAITLVNATDADQGKNAKIEFMIVASNLY 1598
Query: 155 KLAVPSNLVVIVPQTGELLLTGDPPSDDV-------EYELTVEAHDLQSPSRYAREPAQV 207
K + IVP + G ++ + +EL + A +L+ P R A +
Sbjct: 1599 KFGATKSTGSIVPSPFAISQDGRISANTIMAEYNQDRFELEIVARELEQPQRSASTKVNI 1658
Query: 208 WLQFNSPVLQDEQLLQMI 225
W V QL+++I
Sbjct: 1659 W------VFDGTQLVRVI 1670
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 75/152 (49%), Gaps = 19/152 (12%)
Query: 54 STESKSG-VLLVTSGDIDREEVAQYSLVITATDVK--GINKAETH-VTVDVLDENDNSPV 109
S ++ +G V++ S +DRE++ + +L + A D + K+ T + +++LD NDN+PV
Sbjct: 1151 SIDAYTGNVMVANSTILDREQIKELTLSVVAQDKAPAAVQKSATATIHINILDVNDNAPV 1210
Query: 110 FSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPS--NLV 163
F++ VY S++ N +H +++ V A D D GD V Y + + L
Sbjct: 1211 FTRDVY-------NSTVAENAAHQPP-AALLQVQAIDQDDGLYGD-VRYIITAGNEMGLF 1261
Query: 164 VIVPQTGELLLTGDPPSDDVEYELTVEAHDLQ 195
+ Q+G + YELT+ A D Q
Sbjct: 1262 KLDAQSGIVYPAQSLSGKHGAYELTISARDTQ 1293
>gi|354492223|ref|XP_003508249.1| PREDICTED: protocadherin gamma-A7-like [Cricetulus griseus]
Length = 883
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 67/126 (53%), Gaps = 23/126 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT+ ++DRE+++ Y++ + ATD GI ETH+ + V D NDN P FS Y +
Sbjct: 404 LVTAQNLDREKMSMYNITLKATD-GGIPPLSTETHLPIHVSDTNDNPPAFSDSSYSIYIP 462
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLA------VP-SNLVVIVPQTG 170
+ +N+ + +SI SV+A D DGDK + Y LA VP S+ + I TG
Sbjct: 463 E------NNL----RGASIFSVTAQDPDGDKNAQITYALAEDTIQGVPVSSYISINSDTG 512
Query: 171 ELLLTG 176
L G
Sbjct: 513 VLYALG 518
>gi|327270407|ref|XP_003219981.1| PREDICTED: protocadherin gamma-A6-like [Anolis carolinensis]
Length = 810
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 19/165 (11%)
Query: 38 NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG-INKAETHV 96
N+ N + EI+ LV +DREE Y+L++TA D I A +
Sbjct: 167 NYELTGSNHFSLEIQRGENGARQAELVLDQPLDREEQPIYNLILTAADGGNPIKSAMIEI 226
Query: 97 TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVA 153
+ +LD NDN P+FSQ +Y V + N+ W S++ +V ATD D +V
Sbjct: 227 YIVILDTNDNGPLFSQSIYEVTVKE-------NIPKW---STVATVRATDLDEGINGEVK 276
Query: 154 YKL----AVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
Y S + ++ TGE++L + ++ YE V+A D
Sbjct: 277 YFFEDITKRISQMFLLNSTTGEIILVRNLDYEESSWYEFEVQAMD 321
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 63 LVTSGDIDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVY 115
LVT +DREEVA Y++ ITA D ++ +E +++ VLD NDN P+F + Y
Sbjct: 402 LVTEKSLDREEVAVYNITITAVDEGTPALSTSEI-MSLKVLDINDNPPIFVKSSY 455
>gi|148689370|gb|EDL21317.1| cadherin EGF LAG seven-pass G-type receptor 3, isoform CRA_b [Mus
musculus]
Length = 3301
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 480 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 538
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 539 KRY---VAQVREDV-------RPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFAIDS 588
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 589 LTGEIQVMA--PLDFEAEREYALRIRAQDAGRP 619
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 90/322 (27%), Positives = 134/322 (41%), Gaps = 67/322 (20%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVR--YSITQGNDNHTFALKNPTTHEIRNSTESKS 59
EN +GT V + V + P + R YS+ AL N + E+ S + +S
Sbjct: 327 ENEAAGTSV----LRVVAQDPDPGEAGRLIYSLA--------ALMNSRSLELF-SIDPQS 373
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFI 118
G L+ T+ +DRE + ++ L +TA D A T V V V D ND++PVF Q YR
Sbjct: 374 G-LIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYR-- 430
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKL----AVPSNLVV---IVPQ 168
+L NV ++ I + ATD D A Y+ AV + I P+
Sbjct: 431 -----ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFVGSPAVRTAAAAAFEIDPR 482
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVWLQFNSPVLQDEQLLQMID 226
+G + +G + +E YEL VEA D Q P P ++ + VL D
Sbjct: 483 SGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSATVRVHITVL---------D 528
Query: 227 RKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGRIVFALEKETEREKFKIRD 280
AP EKR V + VRP R+ ++ D + G + + + R F I
Sbjct: 529 ENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFAID- 587
Query: 281 ENPWITVDENGDVRVKKRWDFE 302
G+++V DFE
Sbjct: 588 -------SLTGEIQVMAPLDFE 602
Score = 41.2 bits (95), Expect = 0.71, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y
Sbjct: 702 SGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHL------- 754
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
LN + + +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 755 RLNEDAA---VGTSVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLD 811
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 812 YKQERYFKLVLTASD 826
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 68 DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIVGDLKSS 125
D+D E +Y +V+ AT +++A HV + +D+NDNSPV + Q ++ V + +
Sbjct: 1120 DLDYEARQEYVIVVQATSAPLVSRATVHVRL--VDQNDNSPVLNNFQILFNNYVSNRSDT 1177
Query: 126 LNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPS--NLVVIVPQTGELLLT 175
S + IG + A D D D + Y + L+V+ +GEL L+
Sbjct: 1178 FPSGI--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNRTSGELRLS 1222
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 556 LRVTATDKDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVMA-PLDFE 602
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y+L I A D ++ ++ V+D ND++P+F ++ V + + L +V
Sbjct: 603 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSVLE-NAPLGHSV 661
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL-AVPSNL-VVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L V S+ VI TG + ++G + VE Y
Sbjct: 662 IH------IQAVDADHGENSRLEYSLTGVASDTPFVINSATGWVSVSGPLDRESVEHYFF 715
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 716 GVEARDHGSP 725
Score = 39.3 bits (90), Expect = 2.8, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 86/218 (39%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 972 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1019
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V Y L A D +G+ T V++ V D NDN+PVF + + V + NS V
Sbjct: 1020 AVPVYELTAYAVD-RGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1073
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1074 G-----SVVAQITAVDPDDGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1128
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 1129 YVIVVQATSAPLVSRATVHVRLVDQNDNSPVLNNFQIL 1166
Score = 38.1 bits (87), Expect = 6.1, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+D E+ Y+L ITA D KA+T +V V V D NDN+P F Y +V +
Sbjct: 910 LDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSE------ 963
Query: 128 SNVSHWKKFSSIGSVSATDADG 149
F+S+ +SATD D
Sbjct: 964 ----DAPPFTSVLQISATDRDA 981
>gi|148689369|gb|EDL21316.1| cadherin EGF LAG seven-pass G-type receptor 3, isoform CRA_a [Mus
musculus]
Length = 3302
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 480 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 538
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 539 KRY---VAQVREDV-------RPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFAIDS 588
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 589 LTGEIQVMA--PLDFEAEREYALRIRAQDAGRP 619
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 90/322 (27%), Positives = 134/322 (41%), Gaps = 67/322 (20%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVR--YSITQGNDNHTFALKNPTTHEIRNSTESKS 59
EN +GT V + V + P + R YS+ AL N + E+ S + +S
Sbjct: 327 ENEAAGTSV----LRVVAQDPDPGEAGRLIYSLA--------ALMNSRSLELF-SIDPQS 373
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFI 118
G L+ T+ +DRE + ++ L +TA D A T V V V D ND++PVF Q YR
Sbjct: 374 G-LIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYR-- 430
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKL----AVPSNLVV---IVPQ 168
+L NV ++ I + ATD D A Y+ AV + I P+
Sbjct: 431 -----ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFVGSPAVRTAAAAAFEIDPR 482
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVWLQFNSPVLQDEQLLQMID 226
+G + +G + +E YEL VEA D Q P P ++ + VL D
Sbjct: 483 SGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSATVRVHITVL---------D 528
Query: 227 RKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGRIVFALEKETEREKFKIRD 280
AP EKR V + VRP R+ ++ D + G + + + R F I
Sbjct: 529 ENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFAID- 587
Query: 281 ENPWITVDENGDVRVKKRWDFE 302
G+++V DFE
Sbjct: 588 -------SLTGEIQVMAPLDFE 602
Score = 41.2 bits (95), Expect = 0.71, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y
Sbjct: 702 SGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHL------- 754
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
LN + + +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 755 RLNEDAA---VGTSVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLD 811
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 812 YKQERYFKLVLTASD 826
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 68 DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIVGDLKSS 125
D+D E +Y +V+ AT +++A HV + +D+NDNSPV + Q ++ V + +
Sbjct: 1120 DLDYEARQEYVIVVQATSAPLVSRATVHVRL--VDQNDNSPVLNNFQILFNNYVSNRSDT 1177
Query: 126 LNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPS--NLVVIVPQTGELLLT 175
S + IG + A D D D + Y + L+V+ +GEL L+
Sbjct: 1178 FPSGI--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNRTSGELRLS 1222
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 556 LRVTATDKDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVMA-PLDFE 602
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y+L I A D ++ ++ V+D ND++P+F ++ V + + L +V
Sbjct: 603 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSVLE-NAPLGHSV 661
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL-AVPSNL-VVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L V S+ VI TG + ++G + VE Y
Sbjct: 662 IH------IQAVDADHGENSRLEYSLTGVASDTPFVINSATGWVSVSGPLDRESVEHYFF 715
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 716 GVEARDHGSP 725
Score = 39.3 bits (90), Expect = 2.8, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 86/218 (39%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 972 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1019
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V Y L A D +G+ T V++ V D NDN+PVF + + V + NS V
Sbjct: 1020 AVPVYELTAYAVD-RGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1073
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1074 G-----SVVAQITAVDPDDGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1128
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 1129 YVIVVQATSAPLVSRATVHVRLVDQNDNSPVLNNFQIL 1166
Score = 38.1 bits (87), Expect = 6.1, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+D E+ Y+L ITA D KA+T +V V V D NDN+P F Y +V +
Sbjct: 910 LDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSE------ 963
Query: 128 SNVSHWKKFSSIGSVSATDADG 149
F+S+ +SATD D
Sbjct: 964 ----DAPPFTSVLQISATDRDA 981
>gi|125719165|ref|NP_536685.2| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Mus
musculus]
gi|341940343|sp|Q91ZI0.2|CELR3_MOUSE RecName: Full=Cadherin EGF LAG seven-pass G-type receptor 3; Flags:
Precursor
Length = 3301
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 480 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 538
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 539 KRY---VAQVREDV-------RPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFAIDS 588
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 589 LTGEIQVMA--PLDFEAEREYALRIRAQDAGRP 619
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 90/322 (27%), Positives = 134/322 (41%), Gaps = 67/322 (20%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVR--YSITQGNDNHTFALKNPTTHEIRNSTESKS 59
EN +GT V + V + P + R YS+ AL N + E+ S + +S
Sbjct: 327 ENEAAGTSV----LRVVAQDPDPGEAGRLIYSLA--------ALMNSRSLELF-SIDPQS 373
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFI 118
G L+ T+ +DRE + ++ L +TA D A T V V V D ND++PVF Q YR
Sbjct: 374 G-LIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAQYR-- 430
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKL----AVPSNLVV---IVPQ 168
+L NV ++ I + ATD D A Y+ AV + I P+
Sbjct: 431 -----ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFVGSPAVRTAAAAAFEIDPR 482
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVWLQFNSPVLQDEQLLQMID 226
+G + +G + +E YEL VEA D Q P P ++ + VL D
Sbjct: 483 SGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSATVRVHITVL---------D 528
Query: 227 RKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGRIVFALEKETEREKFKIRD 280
AP EKR V + VRP R+ ++ D + G + + + R F I
Sbjct: 529 ENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDKDKDANGLVHYNIISGNSRGHFAID- 587
Query: 281 ENPWITVDENGDVRVKKRWDFE 302
G+++V DFE
Sbjct: 588 -------SLTGEIQVMAPLDFE 602
Score = 41.2 bits (95), Expect = 0.71, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y
Sbjct: 702 SGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHL------- 754
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
LN + + +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 755 RLNEDAA---VGTSVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLD 811
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 812 YKQERYFKLVLTASD 826
Score = 40.0 bits (92), Expect = 1.4, Method: Composition-based stats.
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 15/113 (13%)
Query: 68 DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIVGDLKSS 125
D+D E +Y +V+ AT +++A HV + +D+NDNSPV + Q ++ V + +
Sbjct: 1120 DLDYEARQEYVIVVQATSAPLVSRATVHVRL--VDQNDNSPVLNNFQILFNNYVSNRSDT 1177
Query: 126 LNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPS--NLVVIVPQTGELLLT 175
S + IG + A D D D + Y + L+V+ +GEL L+
Sbjct: 1178 FPSGI--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNRTSGELRLS 1222
Score = 39.7 bits (91), Expect = 1.8, Method: Composition-based stats.
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 556 LRVTATDKDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVMA-PLDFE 602
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y+L I A D ++ ++ V+D ND++P+F ++ V + + L +V
Sbjct: 603 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSVLE-NAPLGHSV 661
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL-AVPSNL-VVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L V S+ VI TG + ++G + VE Y
Sbjct: 662 IH------IQAVDADHGENSRLEYSLTGVASDTPFVINSATGWVSVSGPLDRESVEHYFF 715
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 716 GVEARDHGSP 725
Score = 39.3 bits (90), Expect = 2.8, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 86/218 (39%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 972 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1019
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V Y L A D +G+ T V++ V D NDN+PVF + + V + NS V
Sbjct: 1020 AVPVYELTAYAVD-RGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1073
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1074 G-----SVVAQITAVDPDDGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1128
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 1129 YVIVVQATSAPLVSRATVHVRLVDQNDNSPVLNNFQIL 1166
Score = 38.1 bits (87), Expect = 6.1, Method: Composition-based stats.
Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 11/82 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+D E+ Y+L ITA D KA+T +V V V D NDN+P F Y +V +
Sbjct: 910 LDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASHYTGLVSE------ 963
Query: 128 SNVSHWKKFSSIGSVSATDADG 149
F+S+ +SATD D
Sbjct: 964 ----DAPPFTSVLQISATDRDA 981
>gi|395736272|ref|XP_003776724.1| PREDICTED: protocadherin beta-13 [Pongo abelii]
Length = 781
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+T +DRE A+Y++ IT TD+ + K + ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LLTERPLDRESRAEYNITITVTDLGTPMLKTQLNMTVLVADVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADKGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 LFALRSLDYEALQAFEFRVGASDRGSPA 540
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 71/140 (50%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE A+ L +TA D ++ T V ++VLD NDN+P F Q YR
Sbjct: 195 LVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYR----- 249
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLV----VIVPQTGELLL 174
++ S +S V + VSATDAD +++Y L S+ + I P TGE+ L
Sbjct: 250 VQISEDSPVGFL-----VVKVSATDADTGVNGEISYSLFQASDEIGKTFKINPLTGEIEL 304
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+ ++ YE+ +EA D
Sbjct: 305 KKQLDFEKLQSYEVNIEARD 324
>gi|329112510|ref|NP_001192266.1| cadherin EGF LAG seven-pass G-type receptor 3 precursor [Bos
taurus]
Length = 3314
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 487 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNAPQFSE 545
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 546 KRY---VAQVREDV-------RPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDS 595
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 596 LTGEIQVVA--PLDFEAEREYALRIRAQDAGRP 626
Score = 54.7 bits (130), Expect = 6e-05, Method: Composition-based stats.
Identities = 79/280 (28%), Positives = 116/280 (41%), Gaps = 53/280 (18%)
Query: 42 ALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDV 100
AL N + E+ S + +SG L+ T +DRE + ++ L +TA D A T V V V
Sbjct: 364 ALMNSRSLELF-SIDPQSG-LIRTEAALDRESMDRHYLRVTAQDHGSPRLSATTMVAVTV 421
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLA 157
D ND++PVF Q YR +L NV ++ I + ATD D A Y+
Sbjct: 422 ADRNDHAPVFEQAQYR-------ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFV 471
Query: 158 VPSNLVV-------IVPQTGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVW 208
P I P++G + +G + +E YEL VEA D Q P P
Sbjct: 472 GPPAARAAAADAFEIDPRSGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSAT 526
Query: 209 LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGR 262
++ + VL D AP EKR V + VRP R+ ++ D + G
Sbjct: 527 VRVHITVL---------DENDNAPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGL 577
Query: 263 IVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ + + R F I G+++V DFE
Sbjct: 578 VHYNIISGNSRGHFAID--------SLTGEIQVVAPLDFE 609
Score = 42.7 bits (99), Expect = 0.21, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 82/190 (43%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 563 LRVTATDRDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVVA-PLDFE 609
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y+L I A D ++ ++ V+D ND++P+F ++ V + + L +V
Sbjct: 610 AEREYALRIRAQDAGRPPLSNNTGLASIQVVDINDHTPIFVSTPFQVSVLE-NAPLGHSV 668
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKLA--VPSNLVVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L P VI TG + ++G + VE Y
Sbjct: 669 IH------IQAVDADHGENSRLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYFF 722
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 723 GVEARDHGSP 732
Score = 41.6 bits (96), Expect = 0.50, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 63/135 (46%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y L+
Sbjct: 709 SGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYH-----LRL 763
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
+ ++ V +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 764 NEDATVG-----TSVVSVTAVDRDANSAISYQITGGNTRNRFAISTQGGVGLVTLALPLD 818
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 819 YKQERYFKLVLTASD 833
Score = 41.2 bits (95), Expect = 0.60, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 30/179 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 1076 ENSIVGSVVA--QITAVDPDEGPNAHIMYQIVEGNIPELFQM------------DIFSGE 1121
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIV 119
L D+D E +Y +V+ AT +++A HV ++D+NDNSPV + Q ++ V
Sbjct: 1122 LTALI-DLDYEARQEYIIVVQATSAPLVSRATVHVR--LVDQNDNSPVLNNFQILFNNYV 1178
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
+ + S + IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1179 SNRSDTFPSGI--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1229
Score = 39.3 bits (90), Expect = 2.5, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ GT V + V + + + + Y IT GN + FA+ ++ GV
Sbjct: 765 EDATVGTSV----VSVTAVDRDANSAISYQITGGNTRNRFAI------------STQGGV 808
Query: 62 LLVTSG-DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +D ++ + LV+TA+D + ++ +V +++ D N + PVF Y V
Sbjct: 809 GLVTLALPLDYKQERYFKLVLTASD-RALHD-HCYVHINITDANTHRPVFQSAHYSVSVN 866
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPP 179
+ + S++ +SA+D D G+ + NL T +T P
Sbjct: 867 EDRPV----------GSTVVVISASDDDVGENARITYLLEDNLPQFRIDTDSGAITLQAP 916
Query: 180 ---SDDVEYELTVEAHDLQSPSR 199
D V Y L + A D P +
Sbjct: 917 LDYEDQVTYTLAITARDNGIPQK 939
Score = 38.5 bits (88), Expect = 4.3, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 86/218 (39%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 979 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 1026
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V Y L A D +G+ T V++ V D NDN+PVF + + V + NS V
Sbjct: 1027 AVPVYELTAYAVD-RGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1080
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1081 G-----SVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1135
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 1136 YIIVVQATSAPLVSRATVHVRLVDQNDNSPVLNNFQIL 1173
Score = 38.1 bits (87), Expect = 5.7, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKV 114
++ SG + + + +D E+ Y+L ITA D KA+T +V V V D NDN+P F
Sbjct: 905 DTDSGAITLQA-PLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASH 963
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
Y +V + F+S+ +SATD D
Sbjct: 964 YTGLVSE----------DAPPFTSVLQISATDRDA 988
>gi|195342415|ref|XP_002037796.1| GM18102 [Drosophila sechellia]
gi|194132646|gb|EDW54214.1| GM18102 [Drosophila sechellia]
Length = 3033
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 68/142 (47%), Gaps = 18/142 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
L+ + +DRE ++Y L I +D G+ E + T+ V D NDN P+F VY F + +
Sbjct: 1874 LILNDTLDRETKSKYELRIRVSD--GVQYTEAYATIQVSDTNDNPPLFEDTVYSFDIPE- 1930
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPS----NLVVIVPQTGELLLTGD 177
+ ++ +G + A DAD G V S ++ + PQTG L LT
Sbjct: 1931 ---------NAQRGYQVGQIVAKDADLGQNAQLSYGVVSDWANDVFSLNPQTGMLTLTAR 1981
Query: 178 PPSDDVE-YELTVEAHDLQSPS 198
++V+ Y L V+A D PS
Sbjct: 1982 LDYEEVQHYILIVQAQDNGQPS 2003
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 120/281 (42%), Gaps = 43/281 (15%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT V + + + S + VR I GN+ F L+ E+
Sbjct: 398 ENAVNGTVVAAVAVKDSDSGLNGRTSVR--IVSGNELGHFRLE-----------EAADLH 444
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVG 120
++ +G +DREE+ +Y+L + A D + T H+ +DV D ND+ PVF + Y ++
Sbjct: 445 IVRVNGVLDREEIGKYNLTVVAMDQGTPARTTTAHLIIDVNDVNDHEPVFEKSEYSAVLS 504
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL--VVIVPQTGELLLT 175
+L + S + S++ATD D +V Y + + L + P TG ++ T
Sbjct: 505 ELAPT----------GSFVASITATDEDTGVNAQVHYDILSGNELKWFSMDPLTGLIVTT 554
Query: 176 GDPPSDDVE--YELTVEAHDLQSPSRYAREPAQV-WLQFNSPVLQDEQLLQMIDRKSEAP 232
G P ++ EL++ A D ++A +V L N Q Q Q + +AP
Sbjct: 555 G-PLDREIRDTVELSISARDGGPNPKFAYTQLKVIILDENDEAPQFSQREQNVTLGEDAP 613
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETER 273
+ +T ++ D G + FAL ER
Sbjct: 614 PQTIVALMTA----------TDHDQGTNGSVTFALAPSVER 644
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 86/180 (47%), Gaps = 33/180 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYSI G+ NH F++ T GV+ V + +++ E +++YSL + A D
Sbjct: 2310 IRYSIVLGDQNHDFSISEDT------------GVVRV-AKNLNYERLSRYSLTVRAEDCA 2356
Query: 88 GINKA--ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
N A +T+++LD NDN P F Y V +++++ N + + +V+A
Sbjct: 2357 LENPAGDTAELTINILDINDNRPTFLDSPYLARV--MENTVPPNGGY------VLTVNAY 2408
Query: 146 DAD----GDKVAYKLA-VPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
DAD +V Y L S+L I +G++ L P D EY LT+ A D SP
Sbjct: 2409 DADTPPLNSQVRYFLKEGDSDLFRINASSGDIALL--KPLDREQQSEYTLTLVAMDTGSP 2466
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 59/143 (41%), Gaps = 13/143 (9%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
+Y I GN ++ F L N + S + L T+G++DRE Y L I+A D
Sbjct: 193 QYEIVAGNVDNKFRLVTTA-----NPSGDTSYLHLETTGNLDRESRGSYQLNISARDGGS 247
Query: 89 INK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ V V +LD NDN P+F D SLN ++ +
Sbjct: 248 PPRFGYLQVNVTILDVNDNPPIFDHS-------DYNVSLNETALPGTPVVTVMASDNDLG 300
Query: 148 DGDKVAYKLAVPSNLVVIVPQTG 170
D K+ Y LA + + P+TG
Sbjct: 301 DNSKITYYLAETEHQFTVNPETG 323
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET 94
N N +++ + R E +SG + V +G +DRE+ +Y L + A+D G +AET
Sbjct: 2940 ANANASYSFSENPGEKFR--IEPQSGNITV-AGHLDREQQDEYILKVVASD--GAWRAET 2994
Query: 95 HVTVDVLDENDNSPVFSQKVYRF 117
+T+ + D+ND++P F Y F
Sbjct: 2995 PITITIQDQNDDAPEFEHSFYSF 3017
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 13/82 (15%)
Query: 69 IDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+DRE + Y L ITA D +G ET + + +LDENDNSPVF K Y V +
Sbjct: 2233 LDRELRSSYLLNITARD-RGEPPQSTETQLLIRILDENDNSPVFDPKQYSASVAE----- 2286
Query: 127 NSNVSHWKKFSSIGSVSATDAD 148
N+++ + + VSATD D
Sbjct: 2287 NASIG-----AMVLQVSATDVD 2303
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 72/156 (46%), Gaps = 18/156 (11%)
Query: 68 DIDREEVAQYSLVITATDVKGINK----AETHVTVDVLDENDNSPVFSQKVYRFIVGDLK 123
+IDRE + + L + ATD ++ E VTV V D NDN+PVF +
Sbjct: 1552 EIDRESIDTFRLTVVATDRAQPSERQLSTEKLVTVIVEDINDNAPVFVSMNAAILPPKFS 1611
Query: 124 SSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPP 179
+S S+ +++ V A DAD V Y++ + P L + TG + T P
Sbjct: 1612 TSKGSS-------TAVMQVHAKDADSSSNGLVTYEIVSGPQELFKLQRNTGVITFTPGPQ 1664
Query: 180 -SDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSP 214
+V Y+LT+++ D S R ++V++ +P
Sbjct: 1665 FKQEVRYQLTLKSTDEAVQSE--RRSSEVYITIITP 1698
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 51 IRNSTESKSGVL----LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDEND 105
I +TE GV L +DREE Y+L ++ D +++ V + V+DEND
Sbjct: 1086 IEGNTERMFGVFPDGFLFVRAPLDREERDYYALTVSCRDAGQPSRSSVVPVVIHVIDEND 1145
Query: 106 NSPVFSQKVYRFIV 119
N+P F+ + F +
Sbjct: 1146 NAPQFTNSTFTFSI 1159
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 30/120 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
V YS+ +GN+ F L + T L + +DRE + L++ A D
Sbjct: 1310 VYYSLAKGNEAGQFNLDSATGQ-------------LSLARRLDRESQEIHHLIVVAKDAA 1356
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQ---------------KVYRFIVGDLKSSLNSNV 130
+K + +T+ VLDENDN+P F+Q ++ RF D +NS V
Sbjct: 1357 LKHPLSSNASITIVVLDENDNAPEFTQSSSEVSVLETSPTGTELMRFRASDADQGVNSQV 1416
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTV--DVLDENDNSPVFS 111
S ++G+L +T+ +D EEV Y L++ A D G T +TV +VLD NDN+P+F
Sbjct: 1968 SLNPQTGMLTLTA-RLDYEEVQHYILIVQAQD-NGQPSLSTTITVYCNVLDLNDNAPIFD 2025
Query: 112 QKVY 115
Y
Sbjct: 2026 PMSY 2029
>gi|402872803|ref|XP_003900291.1| PREDICTED: protocadherin beta-4 [Papio anubis]
Length = 795
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 64/135 (47%), Gaps = 24/135 (17%)
Query: 31 SITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN 90
+I DN F LK PT K+ LVT +DRE A+Y++ IT TD+
Sbjct: 380 TICSIPDNLPFVLK-PTL---------KNFYTLVTERPLDRETRAEYNITITVTDLGTPR 429
Query: 91 -KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
K + +TV V D NDN+P F+Q Y V + NS H IGSVSATD D
Sbjct: 430 LKTQQSITVQVSDVNDNAPAFTQTSYTLFVRE----NNSPALH------IGSVSATDRDS 479
Query: 150 D---KVAYKLAVPSN 161
+V Y L P +
Sbjct: 480 GTNAQVTYLLLPPQD 494
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 14/116 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHK-HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
ENS+ GT P+++A + L +Y+I+ + H RN +E K
Sbjct: 143 ENSQPGTL---FPLIIAEDLDVGSNGLQKYTISPNSHFHILT---------RNHSEGKKY 190
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVY 115
LV +DREE +++SL + A D ++ T V + ++D NDN+P F Y
Sbjct: 191 PDLVQDKPLDREEQSEFSLTLVALDGGSPPRSGTIMVRILIMDINDNAPEFVHTPY 246
>gi|326431776|gb|EGD77346.1| PRCDH1 protein [Salpingoeca sp. ATCC 50818]
Length = 9674
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 100/211 (47%), Gaps = 38/211 (18%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDI----- 69
++ A + + + V+Y+IT GND++ F R T S++G ++ G+I
Sbjct: 695 VVAAENDQGSNSRVQYNITNGNDDNMF----------RIDTVSQAGSMV---GNIYAVRA 741
Query: 70 -DREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
D E Q++L +TATD ++ T V V VLD NDN+P F ++ Y F V
Sbjct: 742 LDYENKTQHTLTVTATDFGVPPRSSTAQVNVYVLDINDNTPQFQRRSYAFNV-------- 793
Query: 128 SNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVIVPQTGE---LLLTGDPPSD 181
+ K+ + +G ATD D ++ Y++ S+ +P E + L+G
Sbjct: 794 --LETIKRNTLVGEFQATDRDSGLNAQLTYRIVNGSSGHFNIPNNREGKMVALSGIDYEV 851
Query: 182 DVEYELTVEAHDLQSPSRYAREPAQVWLQFN 212
+Y + VEA D +PSR R+ V++ N
Sbjct: 852 KSQYTVYVEAKDEGAPSR--RDVVPVYITVN 880
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 58/110 (52%), Gaps = 15/110 (13%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
S +S + V+L +G +D + V +++ I TD G++ A+ VTV VLD NDNSPVF ++
Sbjct: 515 SVQSNAVVVLQLTGALDYDTVTSHTVTIQVTD--GVHTAQAVVTVQVLDVNDNSPVFERE 572
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPS 160
Y V + NS+ V+ATDAD +V Y L PS
Sbjct: 573 SYATRVAE-----NSDTGTIALI-----VTATDADSGENGRVTYALTPPS 612
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 103/269 (38%), Gaps = 46/269 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
V Y IT GN N FA+ N T E+ V+ + D+ AQ++L + ATD
Sbjct: 3873 VTYRITGGNSNGLFAI-NRETGEL--------AVVQPLNADVSSGGAAQHTLTVAATDDF 3923
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ V V VL+ N +PVF+ + +VS + +G AT
Sbjct: 3924 ASSPRTSTATVLVTVLNVNQYAPVFAAT--------YSGTFADSVSTGTELVLVG---AT 3972
Query: 146 DADGDKVAYKLAV--PSNLVVIVPQTGELLLTGDPPS-DDVEYELTVEAHDLQSP-SRYA 201
DADGD +AY + N+ I TG L L S Y L V A D P +R A
Sbjct: 3973 DADGDNIAYAITSGNTGNVFAIDAVTGSLTLAAPVCSRTQSSYTLVVTATDDGQPEARSA 4032
Query: 202 REPAQVWLQFN---SPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGE 258
Q+ + SPV + D A RV RA TD +
Sbjct: 4033 GTVVQLSFSASNAASPVFEQASYSFTADSSLNA----YAGRV-RA-----------TDAD 4076
Query: 259 MEGRIVFALEKETEREKFKIRDENPWITV 287
+ I + L + T+ F I ITV
Sbjct: 4077 CDDSITYTLNRNTQF-AFTIHPTTGVITV 4104
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLK 123
DRE AQY L I A+D N A+ VTV+VLDENDN+P+F + Y + + K
Sbjct: 2214 FDRELRAQYVLTIRASDPA--NHADATVTVNVLDENDNAPMFDRTNYTVTIAESK 2266
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 83/194 (42%), Gaps = 35/194 (18%)
Query: 7 GTGVKGLPILVASS--HKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLV 64
G+GV+ P LVA + Q + Y + QG+ N F ++ T GVL V
Sbjct: 2388 GSGVELSPALVAHNVDCLQQGQTLMYGL-QGS-NLPFMMQTAT------------GVL-V 2432
Query: 65 TSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
++G++DRE Q + T T + A + +D DENDNSP F+Q S
Sbjct: 2433 STGNVDREATPQIEVTATVTSGSFVGLATVVIIID--DENDNSPSFAQ-----------S 2479
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLA-VPSNLVVIVPQTGELLLTGD-PP 179
+ + +++ + ATD D V Y LA L I TG + TG
Sbjct: 2480 PVTQAIDEVSYPTTVYTAKATDPDAGAFGTVTYTLADTIDGLFSINSTTGAISNTGALCG 2539
Query: 180 SDDVEYELTVEAHD 193
S Y+LTV A D
Sbjct: 2540 SASSSYDLTVRATD 2553
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 24/143 (16%)
Query: 16 LVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVA 75
LVA+ V YSI G+ FA+ + +G + V S +DRE A
Sbjct: 5227 LVATERDTVATTVMYSIALGSRGD-FAIN------------ASTGAITVASA-LDRETFA 5272
Query: 76 QYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHW 133
Y L++ ATD G+ N VT+ + D NDN+P F G +SL+ + ++
Sbjct: 5273 TYQLLVQATD-NGMPPNVGSVEVTIRIDDVNDNTPAFPS-------GTATTSLSESAANG 5324
Query: 134 KKFSSIGSVSATDADGDKVAYKL 156
+++ +V A + ++Y L
Sbjct: 5325 TLITTLQAVDADAGNASVISYFL 5347
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 22/122 (18%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I + P V Y+I GN + TF L ++ +G L + +D E
Sbjct: 5120 LNITATDADNSPASRVTYAIVSGNVDDTFEL------------DADTGALWLRK-SLDFE 5166
Query: 73 EVAQYSLVITATDVKGINKAETHVT--VDVLDENDNSPVFSQKVYRF------IVGDLKS 124
+Q+SL ++A+D G T++T + V D NDN+PVF+Q Y VGDL
Sbjct: 5167 TRSQFSLNVSASD-SGTPVHTTYITAIIFVADVNDNAPVFNQTSYEVHVSEDASVGDLAL 5225
Query: 125 SL 126
L
Sbjct: 5226 QL 5227
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 117/293 (39%), Gaps = 51/293 (17%)
Query: 16 LVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVA 75
LVA S +P V Y+I QG+ F++ + +GVL +T G +DRE V
Sbjct: 1545 LVAGS-SNPS--VIYTIAQGDPEGLFSI------------HANTGVLSLT-GALDRETVP 1588
Query: 76 QYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKK 135
Y+LV+ T ++A T V + V D NDN+P +Y + + S + +
Sbjct: 1589 TYTLVVKGT--LNSDEATTIVQIVVGDVNDNAPFMQFPLYTLSLAECTS--GACPTGALA 1644
Query: 136 FSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD-----DVEYELTVE 190
S A DAD Y ++ + V + G L L D D LTV
Sbjct: 1645 LSPTAKPVAVDADATPPQYFVSGDARFV--MATDGTLSLASGAAFDRELAADRNITLTVM 1702
Query: 191 AHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRI 250
A D + S + + N+PVLQ L + E P V V+
Sbjct: 1703 ASDGVAQSSASIVVTITDVNDNAPVLQFADGLTV-----ELPENTPLGSVAYTVQ----- 1752
Query: 251 DFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDE-NGDVRVKKRWDFE 302
TD +++ ++ +A++ D+ + +D +G + V +DFE
Sbjct: 1753 ---ATDPDVDDQVTYAIQG----------DDAVFFAMDPLSGSLLVSAPFDFE 1792
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 11/62 (17%)
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAY 154
V + V D NDN+P F+Q Y V D+ + S+I +VSATDAD GD + Y
Sbjct: 1297 VVITVTDSNDNAPAFAQMTYVGAVSDIAAG----------GSTILTVSATDADEGDTITY 1346
Query: 155 KL 156
+
Sbjct: 1347 SI 1348
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 78/189 (41%), Gaps = 33/189 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y+I QG+D FA+ + SG LLV S D E SL + ATD
Sbjct: 1762 VTYAI-QGDDAVFFAM------------DPLSGSLLV-SAPFDFETAPLLSLTVMATD-- 1805
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G++ + +D+ D ND+ PVF+ D+ ++ NV + SV ATD
Sbjct: 1806 GVHTVTATLNIDISDVNDHVPVFNDT-------DITVNMLENVPAGTL---VASVFATDQ 1855
Query: 148 DGDK---VAYKL--AVPSNLVVIVPQTGELLLTGDPPSDDVEYELT--VEAHDLQSPSRY 200
D V Y + A + TG+LL T S D LT + A D P
Sbjct: 1856 DSGALGNVTYSISGATDEGFFTVGRTTGQLLRTSKVVSYDERRVLTLNINAQDGGDPPGR 1915
Query: 201 AREPAQVWL 209
A PA V +
Sbjct: 1916 AVLPATVTV 1924
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 26/134 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI GN + TF L +P + E LV + + Q+ L + ATD
Sbjct: 4389 VSYSIIAGNVDDTFRL-DPVSGE------------LVNQAPLCAQRNPQHVLTVQATD-- 4433
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
++ A VT++V +EN + PV S Y +V +L +F + VSATD
Sbjct: 4434 SVDTATATVTINVSNENLHDPVLSVDSYPIVVSELAGP--------GEF--VAQVSATDE 4483
Query: 148 D-GDKVAYKLAVPS 160
D GD A ++ S
Sbjct: 4484 DCGDTEAIAFSIIS 4497
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 18/149 (12%)
Query: 57 SKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA----ETHVTVDVLDENDNSPVFSQ 112
+ +G + V S I + + Y+L + ATD E +T+ V + NDN+PV S
Sbjct: 2843 ANTGEVFVASA-IHYADASSYTLTVRATDEGDSTHPPEFDELTLTITVNNTNDNAPVLS- 2900
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAV--PSNLVVIVPQTG 170
+G +L+ + S +++ + SATDADGD VA+ N I TG
Sbjct: 2901 ------LGQASVTLSEDASTG---TAVTTASATDADGDAVAFSFVSGNADNAFAIDASTG 2951
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
+ + + ++ Y L V A D P+
Sbjct: 2952 AITVAAPLCASLLDTYTLVVRATDDGEPT 2980
>gi|242012002|ref|XP_002426732.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212510903|gb|EEB13994.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 1910
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 97/224 (43%), Gaps = 39/224 (17%)
Query: 69 IDREEVAQYSLVITATDVKGIN---KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
IDRE++ L I D I KA T +TV + DENDNSP+F + VYR V +
Sbjct: 950 IDREKIEIIRLGIVCEDTGAIGDAQKAFTTLTVLIEDENDNSPMFKKSVYRRSVAE---- 1005
Query: 126 LNSNVSHWKKFSSIGSVSATDADGDK-VAYKLAVP---SNLVVIVPQTGELLLTGDPPSD 181
+ K +S+ +V A D D DK + Y + NL+ + +TGE++++ +
Sbjct: 1006 ------NSKNGTSVVNVIAEDPDKDKSITYHIEGSDDVKNLISLDSETGEIVVSNKIDHE 1059
Query: 182 DVEY-ELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIE---K 237
+ +V A D P R + V Q++D P I
Sbjct: 1060 QTSWLNFSVGATDSGKPPRSSFVDVHV---------------QILDENDNNPVFINDFAN 1104
Query: 238 RRVTRAVRPTK---RIDFSETDGEMEGRIVFALEKETEREKFKI 278
+ V+P K RI+ + D G+I + L+ + + KFKI
Sbjct: 1105 LTIMEDVKPGKEIIRIEAKDADSGEYGKITYLLDGISSQGKFKI 1148
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 104/242 (42%), Gaps = 61/242 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y + GN+ F L +P HE L ++DREE ++ L++ AT+
Sbjct: 1478 VCYFLVGGNEKGLFLL-DPYKHE------------LTVQKELDREETEEHVLLVKATE-D 1523
Query: 88 GIN------------KAETHVTVDVLDENDNSPVFSQKVY---------------RFIVG 120
+N K V V V D ND+SP F +K++ +
Sbjct: 1524 CLNPPSNVSSHDKNDKTILKVLVKVNDINDHSPKFIKKIFTGGVTTNADFGTELIKIKAL 1583
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPS 180
DL S +N V ++ + S + A+G K+ S +I +TG L L P
Sbjct: 1584 DLDSGINGEVEYY----LVNSTQSFLAEGKKIDR-----SEPFLIDKKTGSLFLNFYPQK 1634
Query: 181 DDVEY-ELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKS--EAPHRIEK 237
D Y +LTV A+D Q+ ++ A V++ +L+ +Q ++ + R++ E ++E+
Sbjct: 1635 DMKGYFKLTVMANDSQN----LQDTAHVFIY----LLRQDQRVKFVLRQNPIELKEKLER 1686
Query: 238 RR 239
R
Sbjct: 1687 FR 1688
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 86/189 (45%), Gaps = 28/189 (14%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ +++SI +GND+ F + T+ +G +++ + Y+L +
Sbjct: 1242 PNGKMKFSIVEGNDDDLFYV-----------TDIDNGSAKISASRRLKGSHGNYTLTLQV 1290
Query: 84 TDVK-GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
D+ N A+T V++ V+D NDN+PVF VY +K N+ V S + V
Sbjct: 1291 KDLGYPPNVAKTQVSICVIDFNDNAPVF---VYPGQNSTVKVFENATVD-----SPLIKV 1342
Query: 143 SATDAD-GDKVAYKLAVPSNLV-----VIVPQTGELLLTGDPPSDDVE--YELTVEAHDL 194
+ATD D GD A + + + + + + L P ++ + Y L ++A+DL
Sbjct: 1343 TATDDDMGDNAAVRYKLKHDPLGDWKTFDIDEINGTLFLKKPLDNEKQKIYHLRIQAYDL 1402
Query: 195 QSPSRYARE 203
P+ + +
Sbjct: 1403 GIPTSLSSD 1411
>gi|26331732|dbj|BAC29596.1| unnamed protein product [Mus musculus]
Length = 802
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 14/101 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L++ +DRE VA+Y++ IT D+ I K + ++TV V D NDN+P+F+Q Y + +
Sbjct: 404 LLSQKPLDRESVAEYNITITVADMGSPILKTQVNLTVQVSDINDNAPIFTQTSYTMFIRE 463
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVP 159
NS H IG++SATD+D + Y L P
Sbjct: 464 ----NNSPALH------IGTISATDSDSGSNAHITYSLLPP 494
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 19/166 (11%)
Query: 52 RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVF 110
R ++ K LV +DREE A+ L +TA D + ++ T V ++VLD NDN+P F
Sbjct: 184 RKRSDGKKYPELVLDRALDREEEAELRLTLTAQDGGSLPRSGTTEVHIEVLDINDNAPQF 243
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLV---- 163
Q Y+ + + +S + I +VSATD D +++Y L S+ +
Sbjct: 244 EQLFYKAQIPE-----DSPIGFL-----IITVSATDKDIGVNGQISYSLFQVSDGISKTF 293
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVW 208
I P TGE+ L + + YE+ +EA D + S AQV
Sbjct: 294 SIHPLTGEVRLKEHLDFEKTQSYEINIEARDAGTFSGKCTILAQVL 339
>gi|345307957|ref|XP_001508966.2| PREDICTED: protocadherin Fat 2 [Ornithorhynchus anatinus]
Length = 4144
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 72/159 (45%), Gaps = 22/159 (13%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLV 80
P VRY I G+ F + + +R T+S + +L +RE Y+L+
Sbjct: 68 PQWAVRYRIASGDPAGIFKTEEHVVGDFCFLRIRTKSGNTAIL------NREVKESYTLL 121
Query: 81 ITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG 140
I AT+ +A THV + +LD ND P+FS YR + D + +I
Sbjct: 122 IQATEKTSELEASTHVRIQILDRNDLKPLFSPPSYRVTIPD----------NTPPKRTIC 171
Query: 141 SVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTG 176
+VSATDAD + A Y S L + P +G + +TG
Sbjct: 172 TVSATDADLGQNAGFYYAFNPRSELFAVHPTSGAVTVTG 210
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 36/176 (20%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
++ YS+ +GN+ F + + ++G+L V + +D E + Y L +T D+
Sbjct: 744 MLVYSLAEGNEASCFDI------------DLETGLLRVVA-PLDHEASSFYVLNVTVHDL 790
Query: 87 KGINKAET--HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
GI + + + V+V D NDN P F YR + + + +++ + A
Sbjct: 791 -GIPQKSSWKQLAVNVGDANDNVPRFPPGGYRVRIPE----------DTQPGTTVMRLRA 839
Query: 145 TDADGD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHD 193
DAD + KV Y L PS+ + TGEL++TG S D E Y LTVEA D
Sbjct: 840 DDADKEDNGKVRYALLTPSDKFSVHAVTGELVVTG---SLDRESWPRYVLTVEARD 892
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 33/191 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y + +G+ + FA+ + SG L+ T +D E++ Y L I ++
Sbjct: 1685 ITYEVREGDKDGVFAVN------------AYSG-LISTRKSLDYEKITSYQLKIRGINMA 1731
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G A+ V + V+DEND++P F+Q + VG + + + S V ATDA
Sbjct: 1732 GA-FADAAVLIYVIDENDHAPAFTQPTF---VGYISEAAPEHSLVMGPEHSPLVVRATDA 1787
Query: 148 DGDK---VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDVEYELTVEAH------DLQS 196
D D + Y++ P L I G L + +V+YE T H D +
Sbjct: 1788 DQDANALLVYEIREPEALKYFAIDESMGTLTMVA-----EVDYEQTSSFHFSVHVRDQGN 1842
Query: 197 PSRYAREPAQV 207
P ++ EPA+V
Sbjct: 1843 PVLFSPEPAKV 1853
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 63/130 (48%), Gaps = 17/130 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DRE++ +Y L +T +D G +A T V V VLD NDNSP Q +Y V + +
Sbjct: 2967 LDREDIEKYFLRVTVSD--GKFQASTQVEVFVLDINDNSPKCRQILYTGRVAE-----DV 3019
Query: 129 NVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-SNLVVIVPQTGELL-LTGDPPSDDV 183
H+ I VSA DAD +V Y L P ++ + P TGEL LT +
Sbjct: 3020 PPGHF-----ILQVSAVDADAGVNAQVTYSLHGPGADEFRLDPYTGELFTLTALDREEKD 3074
Query: 184 EYELTVEAHD 193
Y L +A D
Sbjct: 3075 RYHLVAKATD 3084
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 43/90 (47%), Gaps = 16/90 (17%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY-- 115
K+GVL V G +D E A++ + ATD + +E V V+V D NDN PVFSQ VY
Sbjct: 2216 KTGVLSVI-GPLDYEAKAEHVFTVRATDTALGSFSEATVHVEVEDINDNPPVFSQTVYTA 2274
Query: 116 -------------RFIVGDLKSSLNSNVSH 132
R + D S N VS+
Sbjct: 2275 SVSEGLPAHTPVIRLLAADRDSGRNGAVSY 2304
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 81/173 (46%), Gaps = 23/173 (13%)
Query: 26 QLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
++V SI+ N + L+ PT+ + +G L+ T+ +D E + Y L I +
Sbjct: 377 RVVMVSISPVFPNLRYVLQ-PTSDSTGFQLNAHTG-LITTTKPLDFHERSHYKLAIGTSP 434
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ T V VD++D N+++P+FSQ Y + + N+S +S+ +V+AT
Sbjct: 435 ----GQTSTTVFVDIVDCNNHAPMFSQSSYH-------GTFDENISPG---TSVLTVTAT 480
Query: 146 DADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQ 195
D D + V Y +A P ++ + ++ T S ++YEL + Q
Sbjct: 481 DNDSGENGFVTYSIAYPKSVPFSIDPYSGIIST----SKLMDYELMQRLYHFQ 529
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 16/89 (17%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD--VK 87
+ I GN + FA+ +P T LL TS +DRE A++ L + D
Sbjct: 1169 FHIISGNQHGNFAI-DPITG------------LLSTSRQLDRENKAEHILEVAVMDNGEP 1215
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYR 116
G+ ++ + V + VLD NDN P FS K+++
Sbjct: 1216 GL-QSTSRVVIQVLDVNDNHPAFSHKLFK 1243
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 55/124 (44%), Gaps = 17/124 (13%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH 95
N T++L P E R + +G L + +DREE +Y LV ATD G +
Sbjct: 3038 NAQVTYSLHGPGADEFR--LDPYTGELFTLTA-LDREEKDRYHLVAKATDGGG-RSCQAD 3093
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKV 152
V + V D NDN+P F+ +V D N+ V + + VSA D D +V
Sbjct: 3094 VILGVDDVNDNAPRFTISHCSVVVFD-----NTTVK-----TPVAVVSARDPDEGPNAQV 3143
Query: 153 AYKL 156
Y L
Sbjct: 3144 TYSL 3147
>gi|66773256|ref|NP_001019350.1| protocadherin 2 gamma 6 precursor [Danio rerio]
gi|51557475|gb|AAU06423.1| protocadherin cluster 2 gamma 6 [Danio rerio]
Length = 935
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G++DRE +++Y++ ITATD + T ++ + V D NDN PVF Q+ YR V +
Sbjct: 392 LVTTGELDRELLSEYNITITATDEGSPPLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 451
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ K SSI SVSATD D
Sbjct: 452 ----------NNKAGSSICSVSATDPD 468
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 76/146 (52%), Gaps = 27/146 (18%)
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAET---HVTVDVLDENDNSPVFSQKVYRF 117
V LV ++DRE+ + +L++TA D ++ T HVTV LD NDN+PVFSQ VY+
Sbjct: 180 VELVLDKELDREQQKEVTLILTAVDGGTPPRSGTVAIHVTV--LDANDNAPVFSQAVYKV 237
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA----VPSNLVVIVPQTG 170
+ + NS V + + +VSATDAD +V Y+ + + L + +G
Sbjct: 238 SLPE-----NSPVD-----TVVVTVSATDADEGQNGEVTYEFSRISKTANTLFSLDQYSG 287
Query: 171 ELLLTGDPPSD---DVEYELTVEAHD 193
++ + G P D V YE+ +E D
Sbjct: 288 DVRVKG--PIDFEVAVRYEMLIEGKD 311
>gi|390477834|ref|XP_003735370.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-3 [Callithrix jacchus]
Length = 831
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 254 VVAYSI------HSQEPKDP--HDLMFTIHRNTGTISVISSGLDREKVPEYTLTIQATDM 305
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+PVF + Y
Sbjct: 306 DGDGSTTTAVAIVEILDVNDNTPVFDPQKY 335
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DREE+A+Y L A G + + ++++ V D+ND+ P F+Q
Sbjct: 161 AVEKETGWLLLNK-PLDREEIAKYELFGYAVSENGSSVEHPMNISIIVTDQNDHKPKFTQ 219
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
++R V L+ L +S+ V+ATD D
Sbjct: 220 DIFRGSV--LEGVLPG--------TSVMQVTATDED 245
>gi|149640324|ref|XP_001510189.1| PREDICTED: protocadherin beta-2-like [Ornithorhynchus anatinus]
Length = 799
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE ++Y++ IT TD+ N KAE ++TV + D NDN PVF+Q Y V +
Sbjct: 406 LVTDRALDRESQSEYNVTITVTDLGSPNLKAEKNITVLISDVNDNPPVFNQTSYTLYVQE 465
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSV A D D +V+Y L P S+ V I G
Sbjct: 466 ----NNSPALH------IGSVRAVDRDTRENARVSYSLLPPEAGDLPLSSYVSINSDNGN 515
Query: 172 LLLTGDPPSDDV-EYELTVEAHDLQSPS 198
L + + E++ V A D SPS
Sbjct: 516 LYALRSMDYEVIPEFQFAVRAIDGGSPS 543
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 11/88 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE+ + L ITA D ++ T + + V+D NDN+PVFSQ +Y + +
Sbjct: 197 LVLDKALDREKQPEVRLTITAVDGGSPPRSGTAQMRIVVVDINDNAPVFSQPLYETRIPE 256
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG 149
NS+V S + +VSATD D
Sbjct: 257 -----NSSVG-----SLLVTVSATDLDA 274
>gi|22090634|dbj|BAC06837.1| Pf1-cadherin [Ptychodera flava]
Length = 1959
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 95/221 (42%), Gaps = 34/221 (15%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS +GT V G + A S LV YS+ G F L+N K G
Sbjct: 128 LENSPAGTVVYGFESISACSE---CDLVEYSLL-GTGEEKFNLEN------------KDG 171
Query: 61 VLLVTSGDI-DREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
++ + + ++ DRE A Y+L + A + T + + V D NDN+P F + V
Sbjct: 172 IVTIQTNEVLDRESRASYNLTLVAASAS-LETETTDLLITVEDVNDNAPEFDPETCEVTV 230
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLLTG 176
++ S ++ V++ V A D D K V Y + P TG +++ G
Sbjct: 231 PEI-SPADAIVAY---------VHAVDPDAGKNGKVMYYTDTNDMTFSVHPDTGGVIIGG 280
Query: 177 DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQ 217
P EY LTV A D PS A P +V + +PV Q
Sbjct: 281 --PLQAKEYTLTVFARDRGKPSLEASTPGRVIITV-TPVDQ 318
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ LVRYSI + N + + + +S+S V+ G++DREE+ Y +V+ A
Sbjct: 603 NALVRYSILRNAQN--------SVGQAIFAIDSESAVITTQVGNLDREEIPSYDIVVKAV 654
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQ 112
D G + T+ V DENDN P F Q
Sbjct: 655 D-GGAHTGTVTATIYVSDENDNPPEFPQ 681
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 55/121 (45%), Gaps = 24/121 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLV-TSGDIDRE-EVAQYSLVITATDVK 87
YSI GN F R T+ SG +V + ID E +++ L I D K
Sbjct: 713 YSIISGNVGEKF----------RIETDPDSGYAIVKVAKKIDFELNESKFVLTIEVDDSK 762
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
N A T + + V+D ND P FSQ Y L + + K+++IG+V+ATD
Sbjct: 763 --NTATTELDIRVMDANDEVPSFSQPRY----------LAEHPEDFAKWTTIGTVAATDR 810
Query: 148 D 148
D
Sbjct: 811 D 811
>gi|358413184|ref|XP_003582489.1| PREDICTED: protocadherin beta-16-like [Bos taurus]
gi|359067550|ref|XP_003586351.1| PREDICTED: protocadherin beta-16-like [Bos taurus]
Length = 796
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DREE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTERTLDREERAEYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLWVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYK-------LAVPSNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L ++LV I P G
Sbjct: 463 ----NNSPALH------IGSVSATDTDAGANAQVTYSLLPPPDPLVPLASLVSINPDNGH 512
Query: 172 LL-LTGDPPSDDVEYELTVEAHDLQSPS 198
L LT +E V A D SP+
Sbjct: 513 LFALTSLDYEALRAFEFRVGATDRGSPA 540
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 71/140 (50%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV ++DREE + SL +TA D + T V ++V+D NDN+P F Q +Y+ + +
Sbjct: 194 LVLDKELDREEEPEISLTLTALDGGSPPRYGTAQVRIEVVDINDNAPQFQQLLYKVHIPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP----SNLVVIVPQTGELLL 174
NS V S + +VSA+D D K++Y P S + + P+TGE+ L
Sbjct: 254 -----NSPVG-----SLVVTVSASDVDSGLYGKISYTFFQPSEDISKTLEVNPKTGEIRL 303
Query: 175 TGDPPSDDV-EYELTVEAHD 193
+ V YE+ V+A D
Sbjct: 304 RKQVDFETVFSYEVDVKATD 323
>gi|262263226|tpg|DAA06603.1| TPA_inf: protocadherin gamma a9 isoform [Anolis carolinensis]
Length = 938
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 19/165 (11%)
Query: 38 NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG-INKAETHV 96
N+ N + EI+ LV +DREE Y+L++TA D I A +
Sbjct: 167 NYELTGSNHFSLEIQRGENGARQAELVLDQPLDREEQPIYNLILTAADGGNPIKSAMIEI 226
Query: 97 TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVA 153
+ +LD NDN P+FSQ +Y V + N+ W S++ +V ATD D +V
Sbjct: 227 YIVILDTNDNGPLFSQSIYEVTVKE-------NIPKW---STVATVRATDLDEGINGEVK 276
Query: 154 YKL----AVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
Y S + ++ TGE++L + ++ YE V+A D
Sbjct: 277 YFFEDITKRISQMFLLNSTTGEIILVRNLDYEESSWYEFEVQAMD 321
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 63 LVTSGDIDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVY 115
LVT +DREEVA Y++ ITA D ++ +E +++ VLD NDN P+F + Y
Sbjct: 402 LVTEKSLDREEVAVYNITITAVDEGTPALSTSEI-MSLKVLDINDNPPIFVKSSY 455
>gi|262263222|tpg|DAA06599.1| TPA_inf: protocadherin gamma a6 isoform [Anolis carolinensis]
Length = 942
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + + L++ A+D K+ T + V VLD NDN+PVFSQ VY V +
Sbjct: 196 LVLEKPLDREEQSVHDLILIASDGGDPMKSGTLQIHVIVLDANDNAPVFSQSVYEVTVKE 255
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL----AVPSNLVVIVPQTGELLL 174
N+ W S++ ++ ATD D ++ Y S ++++ TGE+++
Sbjct: 256 -------NIPKW---STVATIRATDLDEGTSGQIKYSFEDVTKKLSKMIMLNSTTGEIIV 305
Query: 175 TGDPPSDDVE-YELTVEAHD 193
G+ + YE VEA D
Sbjct: 306 VGNFDYEKSSLYEFEVEAVD 325
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVY 115
LVT +DREEVA Y++ ITA D +GI T +++ VLD NDN P+F + Y
Sbjct: 406 LVTEKSLDREEVAVYNITITAVD-EGIPTLSTSEIISLKVLDTNDNPPLFVKSTY 459
>gi|66773246|ref|NP_001019354.1| protocadherin 2 gamma 10 precursor [Danio rerio]
gi|51557413|gb|AAU06393.1| protocadherin cluster 2 gamma 10 [Danio rerio]
gi|190337818|gb|AAI62093.1| Protocadherin 2 gamma 10 [Danio rerio]
Length = 935
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G++DRE +++Y++ ITATD + T ++ + V D NDN PVF Q+ YR V +
Sbjct: 392 LVTTGELDRELLSEYNITITATDEGSPPLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 451
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ K SSI SVSATD D
Sbjct: 452 ----------NNKAGSSICSVSATDPD 468
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 72/140 (51%), Gaps = 15/140 (10%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV + ++DRE+ + +L++TA D ++ T + V VLD NDN+PVFSQ VY
Sbjct: 182 LVLNKELDREQQKELTLILTAVDGGTPPRSGTVAIHVTVLDANDNAPVFSQAVY------ 235
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLA-VPSNLV---VIVPQTGELLLTG- 176
K SL N ++ + A + +V Y+ V +L+ + +GE+ LTG
Sbjct: 236 -KVSLPENTPVDTVVVTVSATDADEGQNGEVTYEFGHVSEDLLDTFSLDTFSGEIKLTGL 294
Query: 177 -DPPSDDVEYELTVEAHDLQ 195
D S++ EL V+A D Q
Sbjct: 295 IDYESEN-SIELLVQATDGQ 313
>gi|432951770|ref|XP_004084897.1| PREDICTED: protocadherin gamma-A9-like [Oryzias latipes]
Length = 695
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 90/188 (47%), Gaps = 43/188 (22%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
RY++ Q NDN A+ N + V LV +DRE+ + +L++TA D
Sbjct: 169 RYTL-QKNDNFILAVDN-------------NKVELVLENTLDREKQSDMNLLLTAVDGGS 214
Query: 89 INKAET---HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
++ T HVTV LD NDN+PVFSQ VY K++L N + + +VSAT
Sbjct: 215 PQRSGTVIIHVTV--LDANDNAPVFSQDVY-------KTTLPENSPPE---TLVITVSAT 262
Query: 146 DAD---GDKVAYKLAVPS----NLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
DAD V Y S N+ I +TGE+ +TG D E +E+ VEA D
Sbjct: 263 DADEGVNADVTYDFGHMSEDDVNVFSIDSRTGEMKITG---VIDFEEKTIFEVRVEAKDG 319
Query: 195 QSPSRYAR 202
+ YA+
Sbjct: 320 LGLTAYAK 327
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+V++G +DRE V+ Y++ I+ATD ++ ++T V + V D NDN PVF ++ Y V
Sbjct: 399 VVSTGQLDRELVSDYNITISATDEGSPPLSSSKT-VHLSVADINDNPPVFEEQSYSAYVS 457
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + + S++ SVSA D D
Sbjct: 458 E----------NNQAGSTLCSVSARDPD 475
>gi|9965297|gb|AAG10031.1|AF282973_2 protocadherin-beta8 [Homo sapiens]
Length = 610
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 108/255 (42%), Gaps = 49/255 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVG 120
L+T +DRE A+Y++ IT TD+ G + TH+ + VL D NDN+P F+Q Y V
Sbjct: 213 LLTETPLDRESRAEYNVTITVTDL-GTPRLTTHLNMTVLVSDVNDNAPAFTQTSYTLFVR 271
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 272 E----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINTDNG 321
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQLLQMI 225
L + ++ +E V A D SP+ + +V + NSP VL Q
Sbjct: 322 HLFALRSLDYEALQAFEFRVGASDRGSPALSSEALVRVLVLDANDNSPFVLYPLQ----- 376
Query: 226 DRKSEAPHRIEKRRVTRAVRP---TKRIDFSETDGEMEGRIVFALEKETEREKFKIRDEN 282
S AP V RA P ++ + D + + L K TE F +
Sbjct: 377 --NSSAPC---TELVPRAAEPGYLVTKVVAVDGDSGQNAWLSYQLLKATEPGLFGV---- 427
Query: 283 PWITVDENGDVRVKK 297
W NG+VR +
Sbjct: 428 -WA---HNGEVRTAR 438
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE A+ L +TA D ++ T V ++VLD NDN+P F Q YR
Sbjct: 4 LVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYR----- 58
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL 156
++ S +S +S + VSATD D +++Y L
Sbjct: 59 VQISEDSPISFL-----VVKVSATDVDTGVNGEISYSL 91
>gi|195389344|ref|XP_002053337.1| GJ23394 [Drosophila virilis]
gi|194151423|gb|EDW66857.1| GJ23394 [Drosophila virilis]
Length = 1972
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 104/258 (40%), Gaps = 65/258 (25%)
Query: 3 NSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL 62
N SG VK I AS KH + Y + GN++ F + T
Sbjct: 1437 NENSGRDVKIGHIQAASRSKHNRDIFYYMLL-GNEDGAFYVDKLTGD------------- 1482
Query: 63 LVTSGDIDREEVAQYSLVITAT---------------DVKGINKAET--HVTVDVLDEND 105
+ T+ +DRE+ Y+L I A+ +K +N+ T V + VLD ND
Sbjct: 1483 IYTNKSLDREQTDAYTLYILASIKADLHISEEERASFSIKTLNRDNTVAKVGITVLDVND 1542
Query: 106 NSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA-----------Y 154
N+PVF + VY + +N+N K ++I V+A+DAD K A Y
Sbjct: 1543 NAPVFEKSVYY-------AGVNANA---KMNAAITLVNASDADQGKNAKIEYMIVASNLY 1592
Query: 155 KLAVPSNLVVIVPQTGELLLTGDPPSDDV-------EYELTVEAHDLQSPSRYAREPAQV 207
K + IVP + G ++ + +EL + A +L+ P R A +
Sbjct: 1593 KFGATKSTGSIVPSPFAISQDGRITANTIMAEYNQDRFELDIVARELEQPQRSANTKVYI 1652
Query: 208 WLQFNSPVLQDEQLLQMI 225
W V QL+++I
Sbjct: 1653 W------VFDGTQLVRVI 1664
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 77/152 (50%), Gaps = 19/152 (12%)
Query: 54 STESKSGVLLVTSGDI-DREEVAQYSLVITATDVK--GINKAETH-VTVDVLDENDNSPV 109
S ++ +G ++V + I DRE++ + +L + A D + K+ T + +++LD NDN+PV
Sbjct: 1145 SIDAYTGNVMVANASILDREQLKELTLSVVAQDKAPATVQKSATATIHINILDVNDNAPV 1204
Query: 110 FSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVV- 164
F++ VY S+++ N + ++ +++ V A D D GD V Y + + L +
Sbjct: 1205 FTRTVY-------NSTVSENAA-YQPPAALLQVQAIDLDEGLYGD-VRYIITAGNELALF 1255
Query: 165 -IVPQTGELLLTGDPPSDDVEYELTVEAHDLQ 195
+ Q+G + YEL + A D Q
Sbjct: 1256 KLDAQSGIIYPAQSLAGKHGVYELLISARDTQ 1287
>gi|190338824|gb|AAI62560.1| Pcdh2g4 protein [Danio rerio]
Length = 935
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G++DRE +++Y++ ITATD + T ++ + V D NDN PVF Q+ YR V +
Sbjct: 392 LVTTGELDRELLSEYNITITATDEGSPPLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 451
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ K SSI SVSATD D
Sbjct: 452 ----------NNKAGSSICSVSATDPD 468
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 83/178 (46%), Gaps = 40/178 (22%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV + ++DRE+ + +L++TA D ++ T + V VLD NDN+PVFSQ VY+ + +
Sbjct: 182 LVLNKELDREQQKEVTLILTAVDGGTPPRSGTVAIHVTVLDANDNAPVFSQAVYKVSLPE 241
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPS----NLVVIVPQTGELLL 174
NS V + + +VSATDAD +V Y S L I +G + L
Sbjct: 242 -----NSPVD-----TVVVTVSATDADEGQNKEVTYAFGHLSQKVMQLFFIDSVSGVIKL 291
Query: 175 TGDPPSDDVEY------ELTVEAHDLQSPSRYA-----------REPAQVWLQFNSPV 215
TG V+Y EL ++A D Q S Y+ P + NSPV
Sbjct: 292 TG-----AVDYEKERTIELPIQAKDGQGLSTYSTVLIDIVDINDNAPIVILKSLNSPV 344
>gi|66773262|ref|NP_001019348.1| protocadherin 2 gamma 4 precursor [Danio rerio]
gi|51557471|gb|AAU06421.1| protocadherin cluster 2 gamma 4 [Danio rerio]
Length = 935
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVT-VDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G++DRE +++Y++ ITATD + T + + V D NDN PVF Q+ YR V +
Sbjct: 392 LVTTGELDRELLSEYNITITATDEGSPPLSSTKIIHLTVADVNDNPPVFQQQNYRAHVQE 451
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ K SSI SVSATD D
Sbjct: 452 ----------NNKAGSSICSVSATDPD 468
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 77/153 (50%), Gaps = 29/153 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV + ++DRE+ + +L++TA D ++ T + V VLD NDN+PVFSQ VY+ + +
Sbjct: 182 LVLNKELDREQQKEVTLILTAVDGGTPPRSGTVAIHVTVLDANDNAPVFSQAVYKVSLPE 241
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPS----NLVVIVPQTGELLL 174
NS V + + +VSATDAD +V Y S L I +G + L
Sbjct: 242 -----NSPVD-----TVVVTVSATDADEGQNKEVTYAFGHLSQKVMQLFFIDSVSGVIKL 291
Query: 175 TGDPPSDDVEY------ELTVEAHDLQSPSRYA 201
TG V+Y EL ++A D Q S Y+
Sbjct: 292 TG-----AVDYEKERTIELPIQAKDGQGLSTYS 319
>gi|326673381|ref|XP_003199867.1| PREDICTED: protocadherin beta-15-like [Danio rerio]
Length = 810
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 64/119 (53%), Gaps = 16/119 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G++DRE +++Y++ ITATD + T ++ + V D NDN PVF Q+ YR V +
Sbjct: 405 LVTTGELDRELLSEYNITITATDEGSPPLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 464
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGD 177
+ K SSI SVSATD D V Y L S+ V P T L + GD
Sbjct: 465 ----------NNKAGSSICSVSATDPDWRQNGTVVYSLL--SSDVNGAPVTSFLSINGD 511
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 83/175 (47%), Gaps = 34/175 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET---HVTVDVLDENDNSPVFSQKVYRFIV 119
LV + ++DRE+ + +L++TA D ++ T HVTV LD NDN+PVFSQ VY+ +
Sbjct: 195 LVLNKELDREQQKEVTLILTAVDGGTPPRSGTVAIHVTV--LDANDNAPVFSQAVYKVSL 252
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPS----NLVVIVPQTGEL 172
+ NS V + + +VSATDAD +V Y S ++ + +GE+
Sbjct: 253 PE-----NSPVD-----TVVVTVSATDADEGQNGEVTYAFGHLSEGLLDIFSLNSLSGEI 302
Query: 173 LLTGDPP-SDDVEYELTVEAHDLQSPSRYA-----------REPAQVWLQFNSPV 215
TG ++ EL V+A D Q + + P + NSPV
Sbjct: 303 KFTGMIDYEEETLIELPVQAKDGQGLANHCTVLIDVIDVNDNAPIIIIQSLNSPV 357
>gi|296195619|ref|XP_002745420.1| PREDICTED: protocadherin Fat 4 [Callithrix jacchus]
Length = 4981
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L++YSI+ GN+ FA+ S +GVL + +D E ++ + I+ATD
Sbjct: 3123 LIKYSISSGNEEGIFAIN------------SSTGVLTLAKA-LDYELCQKHEMTISATDG 3169
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + VTV+V+D NDNSPVF Y V + + +++ ++AT
Sbjct: 3170 GWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTV----------LENAPSGTTVIHLNAT 3219
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
DAD +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 3220 DADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQG---FLDFETKQSYHLTVKAFNVPDE 3276
Query: 198 SRYAREPAQVWLQ 210
R + V L+
Sbjct: 3277 ERCSFATVNVQLK 3289
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 85/185 (45%), Gaps = 40/185 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+ YSI +GN+ FA+ +S SG V L+ G +D E YSLVI A D
Sbjct: 1244 LIHYSIIKGNEERQFAI------------DSTSGQVALI--GKLDYEATPAYSLVIEAVD 1289
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
++ T + +D+LDENDN+P F K++L +V + + SV+
Sbjct: 1290 SGTVSLNSTCTLNIDILDENDNTPSFP-----------KTTLFVDVLENMRIGELVSSVT 1338
Query: 144 ATDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
ATD+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1339 ATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLA---KKLDFETKSLYKLNITAKDQ 1395
Query: 195 QSPSR 199
P R
Sbjct: 1396 GRPPR 1400
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V+YSI+ G+ + R ++SGV+ T +DREE Y L I ATD
Sbjct: 724 VKYSISAGDRS-------------RFQVNAQSGVI-STRMALDREEKTAYQLQIVATDGG 769
Query: 88 GINKA-ETHVTVDVLDENDNSPVFSQKVYRFI----------VGDLKSS---LNSNVSHW 133
+ + VT+ VLD DN PVFSQ Y F+ VG + +S LNSN+++
Sbjct: 770 NLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFENMALGYHVGSVSASTMDLNSNITYL 829
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ Y+L + ATD KG + T V V VLD NDN+P+F+Q +Y+
Sbjct: 2109 TGELDREEVSNYTLTVVATD-KGQPSLSSSTEVVVMVLDINDNNPIFAQALYK 2160
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 99/258 (38%), Gaps = 44/258 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ T L T+ IDREE + Y L + A+
Sbjct: 826 ITYLITTGDQKGMFAINQVTGQ-------------LTTANVIDREEQSFYQLKVVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V D NDNSP F Q + S+N V +W+ SI A D
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAI---------ESVNV-VENWQAGHSIFQAKAVDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYARE 203
D V Y L P NL I + G + L G Y++ + A D+ P +
Sbjct: 921 DEGVNGMVLYSLKQNPKNLFAINEKNGTISLLGPLDVHAGSYQIEILASDMGVPQLSSSV 980
Query: 204 PAQVWLQ---FNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEME 260
V++ NSPV +QL + P + R ++ S+ D
Sbjct: 981 ILTVYVHDVNDNSPVF--DQLSYEVTLSESEP--VNSRFF--------KVQASDKDSGAN 1028
Query: 261 GRIVFALEKETEREKFKI 278
G I + + + + F I
Sbjct: 1029 GEIAYTIAEGNTGDAFGI 1046
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 83/194 (42%), Gaps = 38/194 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I +GN+ F L N + + + LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIIRGNEAGRFRLD-----ITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KGE 227
Query: 90 NKAETHVTVDVL--DENDNSPVFSQKVYRF------IVGDLKSSLNSNVSHWKKFSSIGS 141
K ++ V+V D NDN PVF Y+ +VG SS+
Sbjct: 228 PKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDTVVG----------------SSVLQ 271
Query: 142 VSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQ 195
V+A DAD + Y+L + P+TG L+T P D +Y LTV+A D
Sbjct: 272 VAAADADEGTNADIRYRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTVQAMDRG 329
Query: 196 SPSRYAREPAQVWL 209
PS R A + L
Sbjct: 330 VPSLTGRAEALIQL 343
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 86/176 (48%), Gaps = 31/176 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN ++F++ N T EIR+ +DRE+V+ Y L I +
Sbjct: 2699 PNGQLDYEIVNGNMENSFSI-NHATGEIRSIRP------------LDREKVSHYVLTIKS 2745
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D KG T V V ++LDENDN+P FSQ ++ V + NS + + ++
Sbjct: 2746 SD-KGSPSQSTSVKVMINILDENDNAPRFSQ-IFSAHVPE-----NSPLGY-----TVTR 2793
Query: 142 VSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ +D D A Y + S I P TG+++++ +D + Y + V AHD
Sbjct: 2794 VTTSDEDIGINAISRYSIMDTSLPFTINPSTGDIVISRPLNREDTDRYRIRVSAHD 2849
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1754 GDGSKIMQLTAMDADEGANALVTYTIISGADD-SFRI------------DPESGDLIATR 1800
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND++P FS+ VY F
Sbjct: 1801 -RLDRERRSKYSLLVRADD--GLQSSDMRINITVSDVNDHTPKFSRPVYSF 1848
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + + A + + VRY I GN N F L +S +G
Sbjct: 2165 ENTLTGTDI--IQVFAADGDEGTNGQVRYGIVNGNTNQEFRL------------DSVTGA 2210
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
+ V +DRE+ Y L + ATD + +T V++ +LD ND P+F Y
Sbjct: 2211 ITVAK-PLDREKTPTYHLTVQATDRGSTPRTDTSTVSITLLDINDFVPIFELSPY 2264
Score = 40.8 bits (94), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 19/91 (20%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGD 121
L T +DRE+ A YSL++ ATD+ ++ + V +LD NDNSPVF Y
Sbjct: 641 LSTISSLDREDQAFYSLLVLATDMGSPPQSSMARINVSLLDINDNSPVFYPVQY------ 694
Query: 122 LKSSLNSNVSHWKK----FSSIGSVSATDAD 148
+H K+ S I +VSATD D
Sbjct: 695 --------FAHIKENEPGGSYITTVSATDPD 717
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 30/156 (19%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN++ GT V L + A S + + I GN+ F E+++S +
Sbjct: 369 ENAQVGTVVALLTVTDADS-PAANGNISVQILGGNEQRHF--------EVQSSKVPNLSL 419
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAET--------HVTVDVLDENDNSPVFSQK 113
+ V S +DRE + Y+L ++ +D G A + + V D ND+ PVFSQ+
Sbjct: 420 IKVASA-LDRERIPSYNLTVSVSDNYGAPPAAAVQARSSVASLVIFVNDINDHPPVFSQQ 478
Query: 114 VYRFIVGDLKSSLNSNVS-HWKKFSSIGSVSATDAD 148
VYR N+S S + VSATD D
Sbjct: 479 VYRV-----------NLSEEAPPGSYVSGVSATDGD 503
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 35/177 (19%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKV 114
K+G + V SG +DRE+ + SL + A + ++G + E V V VLD ND PVF+ +
Sbjct: 3351 KTGQIYV-SGILDREKEERVSLKVLAKNSGSIRGADIDEVTVNVTVLDAND-PPVFTLNI 3408
Query: 115 YRFIVGD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLV 163
Y + + S+ +S+ + W +FS IGS + A
Sbjct: 3409 YSVQISEGVPIGTHVTFVSAFDSDSILSWSRFSYFIGSGNENGA---------------F 3453
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
I PQTG++ +T + + + Y L+V A D +PS V L+ N P+L
Sbjct: 3454 SINPQTGQITVTAELDRETLPIYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 74/175 (42%), Gaps = 31/175 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y + GN+++ F L S SG L VT +DRE + L+ITATD
Sbjct: 2295 LSYVLFGGNEDNAFTL-------------SASGELRVTQ-SLDRETKEHFVLMITATD-S 2339
Query: 88 GINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G T++V+ D NDN P F+ K Y + + + + V+A+
Sbjct: 2340 GSPALTGTGTINVIVDDVNDNVPTFASKAYFTTIPE----------DAPTGTDVLLVNAS 2389
Query: 146 DADGDKVAYKLAVPSN-LVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSP 197
DAD A + N I P TG+++ + D + D Y L V D SP
Sbjct: 2390 DADASTNAVIRIIGGNSQFTINPSTGQIITSALLDRETKD-NYTLVVVCSDTGSP 2443
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 110/282 (39%), Gaps = 61/282 (21%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ + RYSI + T NP+T +I V S ++RE+ +Y + ++A
Sbjct: 2804 NAISRYSIMDTSLPFTI---NPSTGDI------------VISRPLNREDTDRYRIRVSAH 2848
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
D T VT+ V D NDN+P FS+ Y +L + + S V+ VSA
Sbjct: 2849 DSGW--TVSTDVTIFVTDVNDNAPRFSRPSYYLDCPEL-TEIGSKVTQ---------VSA 2896
Query: 145 TDAD---GDKVAYKLAVPSNLVVIVPQTGELL---------LTGDPPSDDVEYELTVEAH 192
TD D +V Y + S I TGE+ +TG + + V +
Sbjct: 2897 TDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQNVTGFSNVNINRHSFIVTSS 2956
Query: 193 DLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVR----PTK 248
D +PS + + ++D AP ++ + T + TK
Sbjct: 2957 DRGNPSLLSETTVTI---------------NIVDSNDNAPQFLKIKYFTPVTKNVEVGTK 3001
Query: 249 RIDFSETDGE---MEGRIVFALEKETEREKFKIRDENPWITV 287
I + D + + + + + + KFK+ ++ WI+V
Sbjct: 3002 LIKVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISV 3043
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 80/184 (43%), Gaps = 31/184 (16%)
Query: 30 YSITQGND--NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+++T +D N A + + T K+GVL V +DRE + Y+LV+ D+
Sbjct: 1966 FNVTDADDGINSQLAYSIASGDSLGQFTVDKNGVLKVLKA-LDRESQSFYNLVVQVHDLP 2024
Query: 88 GINKAE----THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV- 142
I + V++ +LD NDN P F L+ +++ + + I +V
Sbjct: 2025 QIPASRFTSTAQVSIILLDVNDNPPTF---------------LSPKLTYIPENTPIDTVV 2069
Query: 143 ---SATDADG---DKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDL 194
ATD D + Y L P N I GE+ LTG+ ++V Y LTV A D
Sbjct: 2070 FKAQATDPDSGPNSYIEYTLMNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLTVVATDK 2129
Query: 195 QSPS 198
PS
Sbjct: 2130 GQPS 2133
>gi|68532427|gb|AAH98144.1| PCDHB14 protein, partial [Homo sapiens]
Length = 797
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 81/179 (45%), Gaps = 32/179 (17%)
Query: 32 ITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN- 90
I DN F LK PT K+ LV+ +DRE A+Y++ IT TD+
Sbjct: 381 ICSIQDNLPFFLK-PTF---------KNFFTLVSEKALDRESQAEYNITITVTDLGTPRL 430
Query: 91 KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD 150
K E ++TV + D NDN+P F+Q Y V + NS H IGSVSATD D
Sbjct: 431 KTEYNITVLLSDVNDNAPTFTQTSYTLFVRE----NNSPALH------IGSVSATDRDSG 480
Query: 151 ---KVAYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPS 198
+V Y L P ++LV I G L + + E+E V A D SP+
Sbjct: 481 TNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA 539
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 45 NPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDV 100
+P +H +I +S++ K LV +D E+ A+ L +TA D K+ T V + V
Sbjct: 172 SPNSHFYIKIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKV 231
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
LD NDN+P F Q +Y V + + + W I ++SA D D K++Y
Sbjct: 232 LDINDNAPEFPQSLYEVQVPE-----DRPLGSW-----IATISAKDLDAGNYGKISYTF 280
>gi|54013432|dbj|BAD60805.1| protocadherin2-gamma-v12-sCP2 [Danio rerio]
Length = 818
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 36 NDNHTFALKNPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG-INK 91
N +++LK PT E+++ + V ++ +DRE + ++L++ A D +
Sbjct: 161 NSLQSYSLK-PTDKFRLELQSQADGSKNVEMILQKALDREMQSSFTLLLEAFDGGDPVLS 219
Query: 92 AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD--- 148
+ + VLD NDN+PVF QK Y+ + K S + VSATD D
Sbjct: 220 GTVQIHIAVLDINDNAPVFMQKEYK----------ATATEEAPKGSILTVVSATDTDEGS 269
Query: 149 GDKVAYKL-----AVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
+V Y + +V +++ ++ QTGEL+L G + V YELT+ A D
Sbjct: 270 NSEVTYYISDTMDSVMADMFLVNEQTGELILNGHFDYEKVSHYELTIHAKD 320
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSP 108
L+ +G D E+V+ Y L I A D G++ A V +DVLD NDNSP
Sbjct: 298 LILNGHFDYEKVSHYELTIHAKDQGGLSNA-CKVIIDVLDVNDNSP 342
>gi|403271744|ref|XP_003927769.1| PREDICTED: protocadherin Fat 4 [Saimiri boliviensis boliviensis]
Length = 4981
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 90/193 (46%), Gaps = 35/193 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L++YSI+ GN+ FA+ S +GVL + +D E ++ + I+ATD
Sbjct: 3123 LIKYSISSGNEEGIFAIN------------SSTGVLTLAKA-LDYELCQKHEMTISATDG 3169
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + VTV+V+D NDNSPVF Y V + + +++ ++AT
Sbjct: 3170 GWVARTGYCSVTVNVIDVNDNSPVFLSDDYFPTV----------LENAPSGTTVIHLNAT 3219
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSP 197
DAD +AY + + S+L VI P TG + G D E Y LTV+A ++
Sbjct: 3220 DADSGTNAVIAYTVQSSDSDLFVIDPNTGVITTQG---FLDFETKQSYHLTVKAFNVPDE 3276
Query: 198 SRYAREPAQVWLQ 210
R + V L+
Sbjct: 3277 ERCSFATVNVQLK 3289
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 85/185 (45%), Gaps = 40/185 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+ YSI +GN+ FA+ +S SG V L+ G +D E YSLVI A D
Sbjct: 1244 LIHYSIIKGNEERQFAI------------DSTSGQVALI--GKLDYEATPTYSLVIEAVD 1289
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
I+ T + +D+LDENDN+P F K++L +V + + SV+
Sbjct: 1290 SGTISLNSTCTLNIDILDENDNTPSFP-----------KTTLFVDVLENMRIGELVSSVT 1338
Query: 144 ATDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
ATD+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1339 ATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQ 1395
Query: 195 QSPSR 199
P R
Sbjct: 1396 GRPPR 1400
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 100/258 (38%), Gaps = 44/258 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ T L T+ IDREE + Y L + A+
Sbjct: 826 ITYLITTGDQKGMFAINQVTGQ-------------LTTANVIDREEQSFYQLKVVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V D NDNSP F Q + S+N V +W+ SI A D
Sbjct: 871 GTVTGDTVVNITVKDLNDNSPHFLQAI---------ESVNV-VENWQAGHSIFQAKAVDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYARE 203
D V Y L P NL I + G + L G Y++ + A D+ P +
Sbjct: 921 DEGVNGMVLYSLKQNPKNLFAINEKNGTISLLGPLDVHAGSYQIEILASDMGVPQLSSSV 980
Query: 204 PAQVWLQ---FNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEME 260
V++ NSPV +QL + P + R ++ S+ D
Sbjct: 981 ILTVYVHDVNDNSPVF--DQLSYEVTLSESEP--VNSRFF--------KVQASDKDSGAN 1028
Query: 261 GRIVFALEKETEREKFKI 278
G I +A+ + + F I
Sbjct: 1029 GEIAYAIAEGNTGDAFGI 1046
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V+YSI+ G+ + R ++SGV+ T +DREE Y L I ATD
Sbjct: 724 VKYSISAGDRS-------------RFQVNAQSGVI-STRMALDREEKTAYQLQIVATDGG 769
Query: 88 GINKA-ETHVTVDVLDENDNSPVFSQKVYRFI----------VGDLKSS---LNSNVSHW 133
+ + VT+ VLD DN PVFSQ Y F+ VG + +S LNSN+++
Sbjct: 770 NLQSPNQAIVTITVLDTQDNPPVFSQVAYSFVVFENVALGYHVGSVSASTMDLNSNITYL 829
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ Y+L + ATD KG + V V VLD NDN+P+F+Q +Y+
Sbjct: 2109 TGELDREEVSNYTLTVVATD-KGQPPLSSSAEVVVMVLDINDNNPIFAQALYK 2160
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 83/194 (42%), Gaps = 38/194 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I +GN+ F L N + + + LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIIRGNEAGRFRLD-----ITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KGE 227
Query: 90 NKAETHVTVDVL--DENDNSPVFSQKVYR------FIVGDLKSSLNSNVSHWKKFSSIGS 141
K ++ V+V D NDN PVF Y+ +VG SS+
Sbjct: 228 PKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDAVVG----------------SSVLQ 271
Query: 142 VSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQ 195
V+A DAD + Y+L + P+TG L+T P D +Y LTV+A D
Sbjct: 272 VAAADADEGTNADIRYRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTVQAMDRG 329
Query: 196 SPSRYAREPAQVWL 209
PS R A + L
Sbjct: 330 VPSLTGRAEALIQL 343
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 31/176 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN ++F + N T EIR+ +DRE+++ Y L I +
Sbjct: 2699 PNGQLDYEIVNGNMENSFTI-NHATGEIRSIRP------------LDREKISHYVLTIKS 2745
Query: 84 TDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D KG A V +++LDENDN+P FSQ ++ V + NS + + ++
Sbjct: 2746 SD-KGSPSQSASVKVMINILDENDNAPRFSQ-IFSAHVPE-----NSPLGY-----TVTR 2793
Query: 142 VSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ +D D A Y + S I P TG+++++ +D + Y + V AHD
Sbjct: 2794 VTTSDEDIGINAISRYSIMDTSLPFTINPSTGDIIISRPLNREDTDRYRIRVSAHD 2849
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1754 GDGSKIMQLTAMDADEGANALVTYTIISGADD-SFRI------------DPESGDLIATR 1800
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND++P FS+ VY F
Sbjct: 1801 -RLDRERRSKYSLLVRADD--GLQSSDMRINITVSDVNDHTPKFSRPVYSF 1848
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + + A + + VRY I GN N F + +S +G
Sbjct: 2165 ENTLTGTDI--IQVFAADGDEGTNGQVRYGIVNGNTNQEFRI------------DSVTGA 2210
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
+ V +DRE+ Y L + ATD + +T V++ +LD ND P+F Y
Sbjct: 2211 ITVAK-PLDREKTPTYLLTVQATDRGSTPRKDTSTVSIALLDINDFVPIFELSPY 2264
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 19/91 (20%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGD 121
L T +DRE+ A YSL++ ATD+ ++ + V +LD NDNSPVF Y
Sbjct: 641 LSTISSLDREDQAFYSLLVLATDMGSPPQSSMARINVSLLDINDNSPVFYPVQY------ 694
Query: 122 LKSSLNSNVSHWKK----FSSIGSVSATDAD 148
+H K+ S I +VSATD D
Sbjct: 695 --------FAHIKENEPGGSYITTVSATDPD 717
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 68/156 (43%), Gaps = 30/156 (19%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN++ GT V L + A S + + I GN+ F E+++S +
Sbjct: 369 ENAQVGTVVALLTVTDADS-PAANGNISVQILGGNEQRHF--------EVQSSKVPNLSL 419
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAET--------HVTVDVLDENDNSPVFSQK 113
+ V S +DRE + Y+L ++ +D G A + + V D ND+ PVFSQ+
Sbjct: 420 IKVASA-LDRERIPSYNLTVSVSDNYGAPPAAAVQARSSVASLVIFVNDINDHPPVFSQQ 478
Query: 114 VYRFIVGDLKSSLNSNVS-HWKKFSSIGSVSATDAD 148
VYR N+S S + VSATD D
Sbjct: 479 VYRV-----------NLSEEAPPGSYVSGVSATDGD 503
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 35/177 (19%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKV 114
K+G + V SG +DRE+ + SL + A + ++G + E V V VLD ND PVF+ +
Sbjct: 3351 KTGQIYV-SGILDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND-PPVFTLSI 3408
Query: 115 YRFIVGD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLV 163
Y + + S+ +S+ + W +FS IGS + A
Sbjct: 3409 YSVQISEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGA---------------F 3453
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
I PQTG++ +T + + + Y L+V A D +PS V L+ N P+L
Sbjct: 3454 SINPQTGKITVTAELDRETLPVYNLSVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 111/282 (39%), Gaps = 61/282 (21%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ + RYSI + T NP+T +I + S ++RE+ +Y + ++A
Sbjct: 2804 NAISRYSIMDTSLPFTI---NPSTGDI------------IISRPLNREDTDRYRIRVSAH 2848
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
D T VT+ V D NDN+P FS+ Y +L + S + VSA
Sbjct: 2849 DSGW--TVSTDVTIFVTDVNDNAPRFSRPSYYLDCPELT----------ETGSKVTQVSA 2896
Query: 145 TDAD---GDKVAYKLAVPSNLVVIVPQTGELL---------LTGDPPSDDVEYELTVEAH 192
TD D +V Y + S I TGE+ +TG + + V +
Sbjct: 2897 TDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQILKYQNVTGFSNVNINRHSFIVTSS 2956
Query: 193 DLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRR---VTRAVR-PTK 248
D +PS + + ++D AP ++ + VT+ V+ TK
Sbjct: 2957 DRGNPSLLSETTVTI---------------NIVDSNDNAPQFLKIKYFTPVTKNVKVGTK 3001
Query: 249 RIDFSETDGE---MEGRIVFALEKETEREKFKIRDENPWITV 287
I + D + + + + + + KFK+ ++ WI+V
Sbjct: 3002 LIKVTAIDDKDFGLNSEVEYFISNDNHLGKFKLDNDTGWISV 3043
>gi|344265573|ref|XP_003404858.1| PREDICTED: protocadherin beta-3-like [Loxodonta africana]
Length = 784
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 91/199 (45%), Gaps = 37/199 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE ++Y++ IT TD+ K E +TV V D NDN+P F++ Y + +
Sbjct: 401 LVTEGALDRESRSEYNITITVTDLGSPRLKTERTITVLVSDVNDNAPTFTESSYTLFIRE 460
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP-------SNLVVIVPQTGE 171
NS H +GSVSATD D +V Y L P ++LV I G
Sbjct: 461 ----NNSPALH------MGSVSATDRDSGSNSQVTYSLLPPQDPHLPLASLVSINADNGH 510
Query: 172 LLLTGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWL---QFNSPV----LQDEQ 220
L S D E +E V A D SP+ + +V + NSP LQ+
Sbjct: 511 LFALR---SLDYEALRAFEFRVGATDAGSPALSSEALVRVEVVDDNDNSPFVLYPLQNSS 567
Query: 221 --LLQMIDRKSEAPHRIEK 237
+++ R +EA + + K
Sbjct: 568 APCTELVPRAAEAGYLVAK 586
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 52 RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVF 110
RN E + LV +DREE + L + A D K T V +DVLD NDN+P F
Sbjct: 181 RNGGEGRKYPELVLDKALDREEQPELRLTLMAVDGGAPPKTGTALVLIDVLDVNDNAPEF 240
Query: 111 SQKVY 115
Q +Y
Sbjct: 241 EQPLY 245
>gi|148728175|ref|NP_444371.3| protocadherin beta 16 precursor [Mus musculus]
gi|13876292|gb|AAK26066.1| protocadherin beta 16 [Mus musculus]
gi|109733261|gb|AAI16626.1| Protocadherin beta 16 [Mus musculus]
gi|148678208|gb|EDL10155.1| mCG141291 [Mus musculus]
Length = 802
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 14/101 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L++ +DRE VA+Y++ IT D+ I K + ++TV V D NDN+P+F+Q Y + +
Sbjct: 404 LLSQKPLDRESVAEYNITITVADMGSPILKTQVNLTVQVSDINDNAPIFTQTSYTMFIRE 463
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVP 159
NS H IG++SATD+D + Y L P
Sbjct: 464 ----NNSPALH------IGTISATDSDSGSNAHITYSLLPP 494
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 19/166 (11%)
Query: 52 RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVF 110
R ++ K LV +DREE A+ L +TA D + ++ T V ++VLD NDN+P F
Sbjct: 184 RKRSDGKKYPELVLDRALDREEEAELRLTLTAQDGGSLPRSGTTEVHIEVLDINDNAPQF 243
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLV---- 163
Q Y+ + + +S + I +VSATD D +++Y L S+ +
Sbjct: 244 EQLFYKAQIPE-----DSPIGFL-----IITVSATDKDIGVNGQISYSLFQVSDDISKTF 293
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVW 208
I P TGE+ L + + YE+ +EA D + S AQV
Sbjct: 294 SIHPLTGEVRLKEHLDFEKTQSYEINIEARDAGTFSGKCTILAQVL 339
>gi|444721940|gb|ELW62647.1| Protocadherin Fat 4 [Tupaia chinensis]
Length = 2300
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 86/185 (46%), Gaps = 40/185 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+ YS+ +GN+ FA+ +S SG V L+ G +D E YSLVI A D
Sbjct: 1205 LIHYSVIKGNEERQFAI------------DSNSGQVTLI--GTLDYEATPAYSLVIQAVD 1250
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
++ T +++D+LDENDN+P F KS+L +V + + SV+
Sbjct: 1251 SGTVSLNSTCTLSIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVT 1299
Query: 144 ATDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
ATD+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1300 ATDSDSGDNADLQYSITGTNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDK 1356
Query: 195 QSPSR 199
P R
Sbjct: 1357 GRPPR 1361
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 28/124 (22%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ V+YS++ G+ + R ++SGV+ T +DREE Y L I A
Sbjct: 681 PNGTVKYSLSAGDRS-------------RFQVNAQSGVI-STKMALDREEKTAYQLQIVA 726
Query: 84 TDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFI----------VGDLKSS---LNSN 129
TD + + VT+ VLD DN PVFSQ Y F+ VG + +S LNSN
Sbjct: 727 TDGGNLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFENVALGYHVGSVSASSMDLNSN 786
Query: 130 VSHW 133
+S+
Sbjct: 787 ISYL 790
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ YSL + ATD KG + T V V VLD NDN+PVF+Q +Y+
Sbjct: 2068 TGELDREEVSTYSLTVVATD-KGQPALSSSTEVVVRVLDINDNNPVFAQALYK 2119
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 81/198 (40%), Gaps = 29/198 (14%)
Query: 17 VASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQ 76
V++S + + Y IT G+ FA+ T L T+ IDREE +
Sbjct: 776 VSASSMDLNSNISYLITTGDQKGMFAINQVTGQ-------------LTTASVIDREEQSF 822
Query: 77 YSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKF 136
Y L + A+ G +T V + V D NDNSP F Q V S+N V +W+
Sbjct: 823 YQLKVVAS--GGTVAGDTVVNITVKDLNDNSPHFLQAV---------ESVNV-VENWQAG 870
Query: 137 SSIGSVSATDAD---GDKVAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAH 192
SI A D D V Y L P NL I + G + L G Y++ + A
Sbjct: 871 HSIFQAKAVDPDEGVNGMVLYSLRQNPKNLFAINEKNGNISLLGPLDVHVGSYQIEILAS 930
Query: 193 DLQSPSRYAREPAQVWLQ 210
D+ P R + V++
Sbjct: 931 DMGVPQRSSSVILTVYVH 948
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1715 GDGSKIMQLTAMDADEGANALVTYTIISGADD-SFRI------------DPESGDLIATK 1761
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND++P FS+ VY F
Sbjct: 1762 -RLDRERRSKYSLLVRADD--GLQSSDMRINITVSDVNDHTPKFSRPVYSF 1809
Score = 43.9 bits (102), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 16/119 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + +L A + + VRY I +GN N F + +S +G
Sbjct: 2124 ENTLTGTDI--IQVLAADGDEGTNGQVRYGIVEGNANQEFRI------------DSVTGT 2169
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ V + +DRE+ Y L + ATD + +T V++ +LD ND P+F Y V
Sbjct: 2170 ITV-AKPLDREKTPTYLLTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPYSVTV 2227
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 90/218 (41%), Gaps = 43/218 (19%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS-------- 66
++++SS +P + VR + NDN + + S V+L T+
Sbjct: 107 VVLSSSPTYPTE-VRVLVRDLNDNAPVFPDPSIVVTFKEDSSSGRQVILDTATDSDIGSN 165
Query: 67 -GDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYR------F 117
G +DRE QY L++ D KG K + V V V D NDN PVF Y+
Sbjct: 166 GGGLDREVTPQYQLLVEVED-KGEPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPEDA 224
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLL 174
+VG SS+ V+A DAD + Y+L + P+TG L+
Sbjct: 225 VVG----------------SSVLQVAAADADEGTNADIRYRLQDEGTPFQMDPETG--LI 266
Query: 175 TGDPPSD---DVEYELTVEAHDLQSPSRYAREPAQVWL 209
T P D +Y LTV+A D PS R A + L
Sbjct: 267 TVREPLDFEARRQYSLTVQAMDRGVPSLTGRAEALIQL 304
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVF 110
L T +DREE A YSL++ ATD+ ++ + V +LD NDNSPVF
Sbjct: 602 LSTISSLDREEQAFYSLLVLATDLGSPPQSSVARINVSLLDVNDNSPVF 650
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 113/274 (41%), Gaps = 44/274 (16%)
Query: 30 YSITQGND--NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+++T +D N A + + T + GVL V +DRE + Y+LV+ D+
Sbjct: 1927 FNVTDADDGINSQLAYSIASGDSLEQFTVDQKGVLKVLKA-LDRESQSFYNLVVQVHDLP 1985
Query: 88 GINK--AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV--- 142
+ + V++ +LD NDN P F L+ +++ + + I +V
Sbjct: 1986 QLPAFTSTAQVSIILLDVNDNPPTF---------------LSPKLTYIPENTPIDTVVFK 2030
Query: 143 -SATDADG---DKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQS 196
ATD D + Y L P N I GE+ LTG+ ++V Y LTV A D
Sbjct: 2031 AQATDPDSGPNSYIEYPLLTPLGNKFSIGTIDGEVRLTGELDREEVSTYSLTVVATDKGQ 2090
Query: 197 PSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFS 253
P+ + V + N+PV ++A +++E T ++ +
Sbjct: 2091 PALSSSTEVVVRVLDINDNNPVF------------AQALYKVEINENTLTGTDIIQVLAA 2138
Query: 254 ETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
+ D G++ + + + ++F+I ITV
Sbjct: 2139 DGDEGTNGQVRYGIVEGNANQEFRIDSVTGTITV 2172
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 30/156 (19%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN++ GT V L + A S + I GN+ F E+++S +
Sbjct: 330 ENAQVGTVVALLTVTDADSPAANGN-ISVQILGGNEQRHF--------EVQSSKVPNLSL 380
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN--------KAETHVTVDVLDENDNSPVFSQK 113
+ V S +DRE + Y+L ++ +D G + + + V D ND+ PVF+Q+
Sbjct: 381 IKVASA-LDRERIPSYNLTVSVSDNYGAPPAAAVRARSSVASLVIFVNDINDHPPVFAQQ 439
Query: 114 VYRFIVGDLKSSLNSNVS-HWKKFSSIGSVSATDAD 148
VYR N+S S + VSATD D
Sbjct: 440 VYRV-----------NLSEEAPPGSYVCGVSATDGD 464
>gi|62510862|sp|Q5DRA9.1|PCDGE_PANTR RecName: Full=Protocadherin gamma-B2; Short=PCDH-gamma-B2; Flags:
Precursor
Length = 931
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 34/206 (16%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQK 113
+ SK+ LVT G +DREE+ +Y+L ITATD K + VT+ + D NDN+PVF Q
Sbjct: 396 SSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPLSSSIIVTLHISDVNDNAPVFQQT 455
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL-------- 162
Y V + + +SI +SA+D D +V+Y + V S+L
Sbjct: 456 SYMVHVAE----------NNPPGASIAQISASDPDLGPNGQVSYSI-VASDLKPREILSY 504
Query: 163 VVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVL-- 216
V + Q+G + + + +ELT++A D SP+ A +V L N+P +
Sbjct: 505 VSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLNDNAPRVLY 564
Query: 217 -----QDEQLLQMIDRKSEAPHRIEK 237
L M+ R +E + + K
Sbjct: 565 PALGSDGSALFDMVPRAAEPGYLVTK 590
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++K GT P L S P+ L RY + NDN F L T + R E
Sbjct: 144 ESTKPGTTFPLDPAL--DSDVGPNSLQRYHL---NDNEYFDLAEKQTPDGRKYPE----- 193
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYR 116
L+ +DREE + + LV+TA D ++ T + V V D NDN PVFSQ VYR
Sbjct: 194 -LILQHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRVKVTDANDNPPVFSQDVYR 248
>gi|355691683|gb|EHH26868.1| hypothetical protein EGK_16942 [Macaca mulatta]
Length = 736
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 64/135 (47%), Gaps = 24/135 (17%)
Query: 31 SITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN 90
+I DN F LK PT K+ LVT +DRE A+Y++ IT TD+
Sbjct: 380 TICSIPDNLPFVLK-PTL---------KNFYTLVTERPLDRETRAEYNITITVTDLGTPR 429
Query: 91 -KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
K + +TV V D NDN+P F+Q Y V + NS H IGSVSATD D
Sbjct: 430 LKTQQSITVQVSDVNDNAPTFTQTSYTLFVRE----NNSPALH------IGSVSATDRDS 479
Query: 150 D---KVAYKLAVPSN 161
+V Y L P +
Sbjct: 480 GTNAQVTYLLLPPQD 494
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 55/116 (47%), Gaps = 14/116 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHK-HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
ENS+ GT P+L+A + L +Y+I+ + H RN +E K
Sbjct: 143 ENSQPGTL---FPLLIAEDLDVGSNGLQKYTISPNSHFHILT---------RNHSEGKKY 190
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVY 115
LV +DREE +++SL + A D ++ T V + ++D NDN+P F Y
Sbjct: 191 PDLVQDKPLDREEQSEFSLTLVALDGGSPPRSGTVMVRILIMDINDNAPEFVHTPY 246
>gi|190338780|gb|AAI62447.1| Pcdh2g8 protein [Danio rerio]
Length = 935
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G++DRE +++Y++ ITATD + T ++ + V D NDN PVF Q+ YR V +
Sbjct: 392 LVTTGELDRELLSEYNITITATDEGSPPLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 451
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ K SSI SVSATD D
Sbjct: 452 ----------NNKAGSSICSVSATDPD 468
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 89/178 (50%), Gaps = 41/178 (23%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE 93
Q NDN F L T R +E LV + ++DRE+ + +L++TA D ++
Sbjct: 161 QNNDN--FILSILTGANGRKYSE------LVLNKELDREQQKEVTLILTAVDGGTPPRSG 212
Query: 94 T---HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-- 148
T HVTV LD NDN+PVFSQ VY+ + + NS V + + +VSATDAD
Sbjct: 213 TVAIHVTV--LDANDNAPVFSQAVYKVSLPE-----NSPVD-----TVVVTVSATDADEG 260
Query: 149 -GDKVAYKLA-VPSNLVVIVPQ---TGELLLTGDPPSDDVEY------ELTVEAHDLQ 195
+V Y+ + NL+ I +GEL +TG V+Y EL ++A D Q
Sbjct: 261 QNGEVTYEFGHLSENLLDIFSLDAVSGELKMTG-----VVDYEEETLIELPIQAKDGQ 313
>gi|109079045|ref|XP_001091651.1| PREDICTED: protocadherin beta-13-like isoform 1 [Macaca mulatta]
Length = 798
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 109/256 (42%), Gaps = 51/256 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+T +DRE +Y++ IT TD+ + K + ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LLTERPLDRESRGEYNITITVTDLGTPMLKTQLNITVLVADVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDAHLSLTSLVSINADNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ-----L 221
L + ++ +E V A D SP+ + +V + NSP VL Q
Sbjct: 513 LFALRSLDYEALQGFEFRVGASDRGSPALSSEALVRVLVLDANDNSPFVLYPPQNGSAPC 572
Query: 222 LQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDE 281
++++ R +E + + K + + D + + L K TE F +R
Sbjct: 573 IELVPRAAEPGYLVTK------------VVAVDGDSGQNAWLSYQLLKATELGLFGVR-- 618
Query: 282 NPWITVDENGDVRVKK 297
NG+VR +
Sbjct: 619 ------AHNGEVRTAR 628
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE A+ L +TA D ++ T V ++VLD NDN+P F Q YR
Sbjct: 195 LVLDKALDREAEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYR----- 249
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVV----IVPQTGELLL 174
++ S +S + + VSATD D +++Y L S+ + + TGE+ L
Sbjct: 250 VQISEDSPIGFL-----VVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDSLTGEIEL 304
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+ ++ YE+ +EA D
Sbjct: 305 KKQLDFEKLQSYEVNIEARD 324
>gi|190336656|gb|AAI62491.1| Protocadherin 1 gamma b 9 [Danio rerio]
Length = 937
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 36 NDNHTFALKNPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG-INK 91
N +++LK PT E+++ + V ++ +DRE + ++L++ A D +
Sbjct: 161 NSLQSYSLK-PTDKFQLELQSQADGSKNVEMILQKALDREMQSSFTLLLEAFDGGDPVLS 219
Query: 92 AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD--- 148
+ + VLD NDN+PVF QK Y+ + K S + VSATD D
Sbjct: 220 GTVQIHIAVLDINDNAPVFMQKEYK----------ATATEEAPKGSILTVVSATDTDEGS 269
Query: 149 GDKVAYKL-----AVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
+V Y + +V +++ ++ QTGEL+L G + V YELT+ A D
Sbjct: 270 NSEVTYYISDTMDSVMADMFLVNEQTGELILNGHFDYEKVSHYELTIHAKD 320
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSP 108
L+ +G D E+V+ Y L I A D G++ A V +DVLD NDNSP
Sbjct: 298 LILNGHFDYEKVSHYELTIHAKDQGGLSNA-CKVIIDVLDVNDNSP 342
>gi|149726258|ref|XP_001504128.1| PREDICTED: protocadherin beta-7 [Equus caballus]
Length = 795
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 92/196 (46%), Gaps = 31/196 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT TD+ K + ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTESPLDRESQAEYNITITVTDMGSPRLKTQHNITVLVSDVNDNAPAFTQTSYTLWVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D ++ Y L P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDAGANAQLTYSLLPPQDPHLPLASLVSINADNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ-----L 221
L + ++ +E V A D SP+ ++ +V + NSP VL Q
Sbjct: 513 LFALRSLDYEALQAFEFGVGATDRGSPALSSQARVRVLVLDANDNSPFVLYPLQNGSAPC 572
Query: 222 LQMIDRKSEAPHRIEK 237
+++ R +EA + + K
Sbjct: 573 TELVPRAAEAGYLVTK 588
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREEV + SL +TA D ++ T V + VLD NDN P F Q +Y+ V +
Sbjct: 194 LVLDRVLDREEVPELSLTLTALDGGSPPRSGTALVRILVLDINDNVPEFVQSLYKVQVPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
NS V S + +VSA D D
Sbjct: 254 -----NSPVG-----SLVVAVSARDLD 270
>gi|119895631|ref|XP_001254531.1| PREDICTED: protocadherin beta-15 [Bos taurus]
gi|297477331|ref|XP_002689301.1| PREDICTED: protocadherin beta-15 [Bos taurus]
gi|296485265|tpg|DAA27380.1| TPA: protocadherin beta 15 [Bos taurus]
Length = 796
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G +DRE A+Y++ IT TD+ K E ++ V V D NDN+P F+Q Y V +
Sbjct: 403 LVTNGALDRESKAEYNVTITVTDLGTPRLKTEHNIIVLVSDVNDNAPAFTQTSYTLWVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYK-------LAVPSNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L ++LV I P G
Sbjct: 463 ----NNSPALH------IGSVSATDTDAGANAQVTYSLLPPPDPLVPLASLVSINPDNGH 512
Query: 172 LL-LTGDPPSDDVEYELTVEAHDLQSPS 198
L LT +E V A D SP+
Sbjct: 513 LFALTSLDYEALRAFEFRVGATDRGSPA 540
>gi|115425|sp|P20310.1|CADHN_XENLA RecName: Full=Neural cadherin-1; Short=N-cadherin-1; Flags:
Precursor
Length = 905
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 14/119 (11%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E SK GT V + + K P+ ++RY I + T A+ +P I N T G
Sbjct: 279 EGSKPGTYVMTVTAIDGDDPKQPNGMLRYKIL----SQTPAISSPNMFTINNET----GD 330
Query: 62 LLVTSGDIDREEVAQYSLVITATDVK-----GINKAETHVTVDVLDENDNSPVFSQKVY 115
++ + +DRE+V +Y+L+I ATD++ G++ T V + V D NDN P F+ +
Sbjct: 331 IITLAAGLDREKVQRYTLIIQATDMEGNPTYGLSNTATAV-IAVTDVNDNPPEFTAMTF 388
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 75/158 (47%), Gaps = 28/158 (17%)
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRF 117
G L + +DRE++A + L A DV G N+ E + ++V+D NDN P F +++
Sbjct: 217 GGQLSVTKPLDREQIANFHLRAHAVDVNG-NQVENPIDIVINVIDMNDNRPEFLHQIW-- 273
Query: 118 IVGDLKSSLNSNVSHWKKFSS-IGSVSATDADGDK-----VAYKL-----AVPS-NLVVI 165
N ++ K + + +V+A D D K + YK+ A+ S N+ I
Sbjct: 274 ---------NGSIPEGSKPGTYVMTVTAIDGDDPKQPNGMLRYKILSQTPAISSPNMFTI 324
Query: 166 VPQTGELL-LTGDPPSDDVE-YELTVEAHDLQSPSRYA 201
+TG+++ L + V+ Y L ++A D++ Y
Sbjct: 325 NNETGDIITLAAGLDREKVQRYTLIIQATDMEGNPTYG 362
>gi|9256608|ref|NP_061757.1| protocadherin beta-14 precursor [Homo sapiens]
gi|13431380|sp|Q9Y5E9.1|PCDBE_HUMAN RecName: Full=Protocadherin beta-14; Short=PCDH-beta-14; Flags:
Precursor
gi|5457035|gb|AAD43754.1|AF152493_1 protocadherin beta 14 [Homo sapiens]
gi|14009453|gb|AAK51612.1|AF217744_1 protocadherin-beta14 [Homo sapiens]
gi|71043456|gb|AAH99728.1| Protocadherin beta 14 [Homo sapiens]
gi|119582373|gb|EAW61969.1| protocadherin beta 14 [Homo sapiens]
gi|168277588|dbj|BAG10772.1| protocadherin beta 14 precursor [synthetic construct]
Length = 798
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 81/179 (45%), Gaps = 32/179 (17%)
Query: 32 ITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN- 90
I DN F LK PT K+ LV+ +DRE A+Y++ IT TD+
Sbjct: 382 ICSIQDNLPFFLK-PTF---------KNFFTLVSEKALDRESQAEYNITITVTDLGTPRL 431
Query: 91 KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD 150
K E ++TV + D NDN+P F+Q Y V + NS H IGSVSATD D
Sbjct: 432 KTEYNITVLLSDVNDNAPTFTQTSYTLFVRE----NNSPALH------IGSVSATDRDSG 481
Query: 151 ---KVAYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPS 198
+V Y L P ++LV I G L + + E+E V A D SP+
Sbjct: 482 TNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA 540
Score = 37.7 bits (86), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 45 NPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDV 100
+P +H +I +S++ K LV +D E+ A+ L +TA D K+ T V + V
Sbjct: 173 SPNSHFYIKIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKV 232
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
LD NDN+P F Q +Y V + + + W I ++SA D D K++Y
Sbjct: 233 LDINDNAPEFPQSLYEVQVPE-----DRPLGSW-----IATISAKDLDAGNYGKISYTF 281
>gi|109732291|gb|AAI15721.1| Protocadherin beta 16 [Mus musculus]
Length = 802
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 14/101 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L++ +DRE VA+Y++ IT D+ I K + ++TV V D NDN+P+F+Q Y + +
Sbjct: 404 LLSQKPLDRESVAEYNITITVADMGSPILKTQVNLTVQVSDINDNAPIFTQTSYTMFIRE 463
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVP 159
NS H IG++SATD+D + Y L P
Sbjct: 464 ----NNSPALH------IGTISATDSDSGSNAHITYSLLPP 494
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 19/166 (11%)
Query: 52 RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVF 110
R ++ K LV +DREE A+ L +TA D + ++ T V ++VLD NDN+P F
Sbjct: 184 RKRSDGKKYPELVLDRALDREEEAELRLTLTAQDGGSLPRSGTTEVHIEVLDINDNAPQF 243
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLV---- 163
Q Y+ + + +S + I +VSATD D +++Y L S+ +
Sbjct: 244 EQLFYKAQIPE-----DSPIGFL-----IITVSATDKDIGVNGQISYSLFQVSDDISKTF 293
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVW 208
I P TGE+ L + + YE+ +EA D + S AQV
Sbjct: 294 SIHPLTGEVRLKEHLDFEKTQSYEINIEARDAGTFSGKCTILAQVL 339
>gi|14270493|ref|NP_115267.1| protocadherin gamma-B2 isoform 2 precursor [Homo sapiens]
gi|5457084|gb|AAD43778.1|AF152518_1 protocadherin gamma B2 short form protein [Homo sapiens]
gi|75517925|gb|AAI01806.1| Protocadherin gamma subfamily B, 2 [Homo sapiens]
gi|119582343|gb|EAW61939.1| hCG1982215, isoform CRA_r [Homo sapiens]
Length = 811
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 34/206 (16%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQK 113
+ SK+ LVT G +DREE+ +Y+L ITATD K + VT+ + D NDN+PVF Q
Sbjct: 396 SSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPLSSSIIVTLHISDVNDNAPVFQQT 455
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL-------- 162
Y V + + +SI +SA+D D +V+Y + V S+L
Sbjct: 456 SYMVHVAE----------NNPPGASIAQISASDPDLGPSGQVSYSI-VASDLKPREILSY 504
Query: 163 VVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVW---LQFNSP-VL- 216
V + Q+G + + + +ELT++A D SP+ A +V L N+P VL
Sbjct: 505 VSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLNDNAPRVLY 564
Query: 217 -----QDEQLLQMIDRKSEAPHRIEK 237
L M+ R +E + + K
Sbjct: 565 PALGPDGSALFDMVPRAAEPGYLVTK 590
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++K GT P L S P+ L RY + NDN F L T + R E
Sbjct: 144 ESTKPGTTFPLDPAL--DSDVGPNSLQRYHL---NDNEYFDLAEKQTPDGRKYPE----- 193
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYR 116
L+ +DREE + + LV+TA D ++ T + + V D NDN PVFSQ VYR
Sbjct: 194 -LILKHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYR 248
>gi|344265054|ref|XP_003404602.1| PREDICTED: protocadherin beta-4-like [Loxodonta africana]
Length = 793
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 73/152 (48%), Gaps = 30/152 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+T +DRE+ A+Y++ IT TD+ K E +TV V D NDN+P F+Q Y V +
Sbjct: 402 LLTDSPLDREKTAEYNITITVTDLGSPRLKTEHKITVLVSDVNDNAPTFTQTSYTLFVRE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPS--------NLVVIVPQTG 170
NS H +G+VSATD D +V Y L +PS +LV I G
Sbjct: 462 ----NNSPALH------MGTVSATDRDSGSNAQVTYSL-LPSQDPHLPLASLVSINADNG 510
Query: 171 ELLLTGDPPSDDVE----YELTVEAHDLQSPS 198
L S D E +E V A DL SP+
Sbjct: 511 HLFALR---SLDYEALRAFEFRVGAADLGSPA 539
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 80/177 (45%), Gaps = 31/177 (17%)
Query: 28 VRYSITQGND--NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
V YS+ Q +D TF++ N T E+R + + +D E++ Y + I ATD
Sbjct: 276 VSYSLFQASDEIKQTFSI-NEVTGEMRLTKK------------LDFEKINSYHVEIEATD 322
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G++ T V ++V+D NDN+P + L SS+ N + SI +
Sbjct: 323 GGGLSGKGT-VVIEVVDVNDNAP-------ELTISSLTSSIPENAP--ETVVSIFRIRDR 372
Query: 146 DADGDKVAYKLAVPSNLVVIVPQTGE--LLLTGDPPSD---DVEYELTVEAHDLQSP 197
D+ GD ++P +L I+ T + L D P D EY +T+ DL SP
Sbjct: 373 DS-GDNGKMICSIPDHLPFILKPTFKNFYTLLTDSPLDREKTAEYNITITVTDLGSP 428
>gi|190336619|gb|AAI62458.1| Protocadherin 2 gamma 1 [Danio rerio]
Length = 948
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G++DRE +++Y++ ITATD + T ++ + V D NDN PVF Q+ YR V +
Sbjct: 405 LVTTGELDRELLSEYNITITATDEGSPPLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 464
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ K SSI SVSATD D
Sbjct: 465 ----------NNKAGSSICSVSATDPD 481
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 81/173 (46%), Gaps = 30/173 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV + ++DRE+ + +L++TA D ++ T + V VLD NDN+PVFSQ VY+ + +
Sbjct: 195 LVLNKELDREQQKEVTLILTAVDGGTPPRSGTVAIHVTVLDANDNAPVFSQAVYKVSLPE 254
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPS----NLVVIVPQTGELLL 174
NS V + + +VSATDAD +V Y S L + +G + L
Sbjct: 255 -----NSPVD-----TVVVTVSATDADEGQNGEVTYAFGHVSQKLLQLFFLDSVSGVIKL 304
Query: 175 TGDPPSDDVE-YELTVEAHDLQSPSRYA-----------REPAQVWLQFNSPV 215
G +D EL V+A D Q + Y+ P + NSPV
Sbjct: 305 IGPIDYEDESIIELPVQAKDGQGLASYSNVFIDIVDANDNAPIIILQSLNSPV 357
>gi|363738857|ref|XP_003642082.1| PREDICTED: uncharacterized protein LOC100857645 [Gallus gallus]
Length = 1680
Score = 54.7 bits (130), Expect = 6e-05, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 15/102 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHV-TVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DREE AQ+ +V+TA D TH +VD+ D NDN+PVF+Q Y V +
Sbjct: 1267 LVTVSTLDREERAQHMVVVTAADAGSPPLTSTHTFSVDISDVNDNAPVFNQTSYTMYVHE 1326
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPS 160
+ +G+V ATDAD KV+Y + VP+
Sbjct: 1327 NNAPA----------LLVGAVKATDADAGPNAKVSYSV-VPA 1357
Score = 45.8 bits (107), Expect = 0.030, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + LV+TATD ++ T V V VLD NDN PVFS++VY V +
Sbjct: 120 LVLQRPLDREEQRELHLVLTATDGGSPPRSGTAQVRVVVLDANDNMPVFSREVYEVRVAE 179
Score = 43.5 bits (101), Expect = 0.12, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 77/151 (50%), Gaps = 25/151 (16%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQK 113
+E++ + LV +DREE + + ATD + T + + VLD NDN+P+F+QK
Sbjct: 1049 SENEKFIELVLEKPLDREEQPEMDFTLVATDGGSPPRTGSTEILIVVLDINDNAPIFTQK 1108
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVP----SNLVVI 165
+Y I L+++ +V + V A DAD GD ++Y+ + +L I
Sbjct: 1109 LY--IAHVLENAPEGSV--------VLRVVANDADEGVNGD-ISYQFSQSVGHRHSLFTI 1157
Query: 166 VPQTGELLLTGDPPSD---DVEYELTVEAHD 193
+TGE+ + P D + +++LTV+A D
Sbjct: 1158 NSKTGEIGIA--KPLDFETEKKHKLTVQAVD 1186
>gi|116283998|gb|AAH14462.1| CDH3 protein [Homo sapiens]
Length = 784
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 252 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 303
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+P+F + Y
Sbjct: 304 DGDGSTTTAVAVVEILDANDNAPMFDPQKY 333
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 26/156 (16%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DREE+A+Y L A G + + ++++ V D+ND+ P F+Q
Sbjct: 159 AVEKETGWLLLNK-PLDREEIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQ 217
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAV-----------PSN 161
+R V L+ L +S+ V+ATD D Y V P +
Sbjct: 218 DTFRGSV--LEGVLPG--------TSVMQVTATDEDDAIYTYNGVVAYSIHSQEPKDPHD 267
Query: 162 LVVIVPQ---TGELLLTGDPPSDDVEYELTVEAHDL 194
L+ + + T ++ +G EY LT++A D+
Sbjct: 268 LMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 303
>gi|397518022|ref|XP_003846023.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-11 [Pan
paniscus]
Length = 797
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+DRE A+Y++ IT TD+ GI K E + TV V D NDN+P F+Q Y V S
Sbjct: 409 LDRESTAEYNITITVTDL-GIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFV----SEN 463
Query: 127 NSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNL 162
NS H IGSVSATD D +V Y L P +L
Sbjct: 464 NSPALH------IGSVSATDRDSGTNAQVNYSLLPPQDL 496
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 21/158 (13%)
Query: 48 THEIRNSTE--SKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDEND 105
+ +IR + E KSG + +T+ +D E + YS++I ATD G+ T V + V+D ND
Sbjct: 285 SEDIRKTFEINQKSGDITLTA-PLDFETIESYSIIIQATDRGGLFGKST-VXIQVIDVND 342
Query: 106 NSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVV 164
N+P + SS+ S + + + S D D GD ++P +L
Sbjct: 343 NAPEIT-----------VSSITSPIPENTPETVVMVFSIQDIDSGDNGRIVCSIPEDLPF 391
Query: 165 IVPQTGE--LLLTGDPPSD---DVEYELTVEAHDLQSP 197
++ + E L + P D EY +T+ DL P
Sbjct: 392 VLKSSVENYYTLETERPLDRESTAEYNITITVTDLGIP 429
>gi|119603643|gb|EAW83237.1| cadherin 3, type 1, P-cadherin (placental), isoform CRA_a [Homo
sapiens]
Length = 784
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 252 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 303
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+P+F + Y
Sbjct: 304 DGDGSTTTAVAVVEILDANDNAPMFDPQKY 333
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 26/156 (16%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DREE+A+Y L A G + + ++++ V D+ND+ P F+Q
Sbjct: 159 AVEKETGWLLLNK-PLDREEIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQ 217
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAV-----------PSN 161
+R V L+ L +S+ V+ATD D Y V P +
Sbjct: 218 DTFRGSV--LEGVLPG--------TSVMQVTATDEDDAIYTYNGVVAYSIHSQEPKDPHD 267
Query: 162 LVVIVPQ---TGELLLTGDPPSDDVEYELTVEAHDL 194
L+ + + T ++ +G EY LT++A D+
Sbjct: 268 LMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 303
>gi|26331274|dbj|BAC29367.1| unnamed protein product [Mus musculus]
Length = 428
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 14/101 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L++ +DRE VA+Y++ IT D+ I K + ++TV V D NDN+P+F+Q Y + +
Sbjct: 30 LLSQKPLDRESVAEYNITITVADMGSPILKTQVNLTVQVSDINDNAPIFTQTSYTMFIRE 89
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVP 159
NS H IG++SATD+D + Y L P
Sbjct: 90 ----NNSPALH------IGTISATDSDSGSNAHITYSLLPP 120
>gi|119603645|gb|EAW83239.1| cadherin 3, type 1, P-cadherin (placental), isoform CRA_c [Homo
sapiens]
Length = 836
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 259 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 310
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+P+F + Y
Sbjct: 311 DGDGSTTTAVAVVEILDANDNAPMFDPQKY 340
>gi|54013430|dbj|BAD60804.1| protocadherin2-gamma-v12-sCP1 [Danio rerio]
Length = 955
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 36 NDNHTFALKNPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG-INK 91
N +++LK PT E+++ + V ++ +DRE + ++L++ A D +
Sbjct: 161 NSLQSYSLK-PTDKFRLELQSQADGSKNVEMILQKALDREMQSSFTLLLEAFDGGDPVLS 219
Query: 92 AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD--- 148
+ + VLD NDN+PVF QK Y+ + K S + VSATD D
Sbjct: 220 GTVQIHIAVLDINDNAPVFMQKEYK----------ATATEEAPKGSILTVVSATDTDEGS 269
Query: 149 GDKVAYKL-----AVPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHD 193
+V Y + +V +++ ++ QTGEL+L G + V YELT+ A D
Sbjct: 270 NSEVTYYISDTMDSVMADMFLVNEQTGELILNGHFDYEKVSHYELTIHAKD 320
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSP 108
L+ +G D E+V+ Y L I A D G++ A V +DVLD NDNSP
Sbjct: 298 LILNGHFDYEKVSHYELTIHAKDQGGLSNA-CKVIIDVLDVNDNSP 342
>gi|355691685|gb|EHH26870.1| hypothetical protein EGK_16946 [Macaca mulatta]
Length = 801
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 70/149 (46%), Gaps = 24/149 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVG 120
L+T +DRE A+Y++ IT TD+ G + TH+ + VL D NDN P F+Q Y V
Sbjct: 404 LLTEKPLDRESRAEYNVTITVTDL-GTPRLTTHLNMTVLVSDVNDNVPAFTQISYTLFVR 462
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P S+LV G
Sbjct: 463 E----NNSPALH------IGSVSATDRDSSTNAQVTYSLLPPQDQHLPLSSLVSTNADNG 512
Query: 171 ELLLTGDPPSDDV-EYELTVEAHDLQSPS 198
L + + E+E V A D SP+
Sbjct: 513 HLFALRSLDYEALQEFEFRVRAADRGSPA 541
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 67/140 (47%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE A+ L +TA D ++ T V ++V+D NDN+P F Q YR + +
Sbjct: 195 LVLDKALDREAEAELRLTLTALDGGSPPRSGTAQVYIEVVDVNDNAPEFEQPFYRVQISE 254
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVV----IVPQTGELLL 174
+S + + VSATD D +++Y L S+ + + TGE+ L
Sbjct: 255 -----DSPIGFL-----VVKVSATDVDTGVNGEISYSLFQASDEISKTFKVDSLTGEIEL 304
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+ ++ YE+ +EA D
Sbjct: 305 KKQLDFEKLQSYEVNIEARD 324
>gi|354484251|ref|XP_003504303.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3
[Cricetulus griseus]
Length = 3288
Score = 54.7 bits (130), Expect = 6e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 455 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNTPQFSE 513
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 514 KRY---VAQVREDV-------RPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDS 563
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 564 LTGEIQVVA--PLDFEAEREYVLRIRAQDAGRP 594
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 87/322 (27%), Positives = 131/322 (40%), Gaps = 67/322 (20%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVR--YSITQGNDNHTFALKNPTTHEIRNSTESKS 59
EN +GT V + V + P + R YS+ AL N + E+ S + +S
Sbjct: 302 ENEAAGTAV----LRVVAQDPDPGEAGRLVYSLA--------ALMNSRSLELF-SIDPQS 348
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFI 118
G L+ T+ +DRE + ++ L +TA D A T V V V D ND++PVF Q YR
Sbjct: 349 G-LIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAHYR-- 405
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLA-------VPSNLVVIVPQ 168
+L NV ++ I + ATD D A Y+ + I P+
Sbjct: 406 -----ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFVGSPAARSEAAAAFEIDPR 457
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVWLQFNSPVLQDEQLLQMID 226
+G + +G + +E YEL VEA D Q P P ++ + VL D
Sbjct: 458 SGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSATVRVHITVL---------D 503
Query: 227 RKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGRIVFALEKETEREKFKIRD 280
P EKR V + VRP R+ ++ D + G + + + R F I
Sbjct: 504 ENDNTPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAID- 562
Query: 281 ENPWITVDENGDVRVKKRWDFE 302
G+++V DFE
Sbjct: 563 -------SLTGEIQVVAPLDFE 577
Score = 42.0 bits (97), Expect = 0.41, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 30/179 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 1044 ENSIVGSVVA--QITAVDPDEGPNAHIMYQIVEGNIPELFQM------------DIFSGE 1089
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIV 119
L D+D E +Y +V+ AT +++A HV + +D+NDNSPV + Q ++ V
Sbjct: 1090 LTALI-DLDYEARQEYVIVVQATSAPLVSRATVHVRL--VDQNDNSPVLNNFQILFNNYV 1146
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
+ + S + IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1147 SNRSDTFPSGI--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1197
Score = 42.0 bits (97), Expect = 0.42, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 531 LRVTATDRDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVVA-PLDFE 577
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y L I A D ++ ++ V+D ND++P+F ++ V + + L +V
Sbjct: 578 AEREYVLRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSVLE-NAPLGHSV 636
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKLA--VPSNLVVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L P VI TG + ++G + VE Y
Sbjct: 637 IH------IQAVDADHGENSRLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYFF 690
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 691 GVEARDHGSP 700
Score = 41.6 bits (96), Expect = 0.55, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y
Sbjct: 677 SGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHL------- 729
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
LN + + +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 730 RLNEDAA---VGTSVVSVTAVDRDANSAISYQITGGNSRNRFAISTQGGVGLVTLALPLD 786
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 787 YKQERYFKLVLTASD 801
Score = 39.3 bits (90), Expect = 2.8, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 86/218 (39%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 947 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 994
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V Y L A D +G+ T V++ V D NDN+PVF + + V + NS V
Sbjct: 995 AVPVYELTAYAVD-RGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1048
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1049 G-----SVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1103
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 1104 YVIVVQATSAPLVSRATVHVRLVDQNDNSPVLNNFQIL 1141
Score = 38.5 bits (88), Expect = 4.8, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKV 114
++ SG + + + +D E+ Y+L ITA D KA+T +V V V D NDN+P F
Sbjct: 873 DANSGAITLQA-PLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASH 931
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
Y +V + F+S+ +SATD D
Sbjct: 932 YTGLVSE----------DAPPFTSVLQISATDRDA 956
Score = 37.4 bits (85), Expect = 8.3, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ GT V + V + + + + Y IT GN + FA+ ++ GV
Sbjct: 733 EDAAVGTSV----VSVTAVDRDANSAISYQITGGNSRNRFAI------------STQGGV 776
Query: 62 LLVTSG-DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +D ++ + LV+TA+D + ++ +V +++ D N + PVF Y
Sbjct: 777 GLVTLALPLDYKQERYFKLVLTASD-RALHD-HCYVHINITDANTHRPVFQSAHYSV--- 831
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPP 179
S+N + S++ +SA+D D G+ + NL +T P
Sbjct: 832 ----SMNEDRP---VGSTVVVISASDDDVGENARITYLLEDNLPQFRIDANSGAITLQAP 884
Query: 180 ---SDDVEYELTVEAHDLQSPSR 199
D V Y L + A D P +
Sbjct: 885 LDYEDQVTYTLAITARDNGIPQK 907
>gi|119895599|ref|XP_870110.2| PREDICTED: protocadherin beta-14 isoform 1 [Bos taurus]
gi|297477329|ref|XP_002689280.1| PREDICTED: protocadherin beta-14 [Bos taurus]
gi|296485248|tpg|DAA27363.1| TPA: protocadherin beta 14 [Bos taurus]
Length = 799
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 111/259 (42%), Gaps = 47/259 (18%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYR 116
K+ LV+ +DREE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y
Sbjct: 398 KNFFTLVSDKALDREERAEYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYT 457
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYK-------LAVPSNLVVIV 166
V + NS H IGSVSATD D +V Y L ++LV I
Sbjct: 458 LWVRE----NNSPALH------IGSVSATDTDAGANAQVTYSLLPPPDPLVPLASLVSIN 507
Query: 167 PQTGELL-LTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQL 221
P G L LT +E V A D SP+ ++ +V + N+P VL Q
Sbjct: 508 PDNGHLFALTSLDYEALRAFEFRVGATDRGSPALSSQALVRVLVADANDNAPFVLYPLQ- 566
Query: 222 LQMIDRKSEAPHRIEKRRVTRAVRP---TKRIDFSETDGEMEGRIVFALEKETEREKFKI 278
+ AP V RA P ++ + DG + + L K TE F +
Sbjct: 567 ------NASAPC---TELVPRAAEPGYLVTKVVAVDGDGGQNAWLSYQLLKATEPGLFGV 617
Query: 279 RDENPWITVDENGDVRVKK 297
W NG+VR +
Sbjct: 618 -----WA---HNGEVRTAR 628
Score = 37.7 bits (86), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 45 NPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN---KAETHVTV 98
+P +H +I++S + K LV +D EE + L + A D G N T V +
Sbjct: 173 SPNSHFYIKIQDSDDGKIYPELVLHRALDHEEEPELRLTLVALD--GGNPPRSGTTLVLI 230
Query: 99 DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
VLD NDN+P F Q++Y V + N+ V W I +VSA D D
Sbjct: 231 KVLDINDNAPEFPQRLYEVQVLE-----NAPVGSW-----IITVSAKDLDA 271
>gi|291223028|ref|XP_002731514.1| PREDICTED: fat-like [Saccoglossus kowalevskii]
Length = 3888
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 35/206 (16%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
MEN GT + + S P+ + Y+I G+D F + +S SG
Sbjct: 2683 MENVVPGTKIAKVAAYDVDSA--PNADIYYNIFSGDDEGQFEI------------DSLSG 2728
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYRFI 118
++ VT+ +DRE + QY VI A D G + + +T++VLD ND P++++ VY
Sbjct: 2729 IVSVTAT-LDRETIEQYVFVIHAAD-SGFPELTGSSTITLNVLDINDEPPLYTENVY--- 2783
Query: 119 VGDLKSSLNSNV-SHWKKFSSIGSVSATDAD---GDKVAYKLAVPS--NLVVIVPQTGEL 172
N+NV S ++I +V+A D D G ++ Y + NL I P TG++
Sbjct: 2784 --------NNNVDSDVDIGTTIMTVTANDPDLGPGGEILYNITYGDDFNLYDIDPVTGDV 2835
Query: 173 LLTGDPPSDDVEYELTVEAHDLQSPS 198
L T Y L V A D PS
Sbjct: 2836 LTTHSLIDAAGVYALVVTASDKGDPS 2861
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 65 TSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
TS +DRE +A Y+LV+ A G+ + V + VLD NDN+PVF+ Y
Sbjct: 2931 TSDMLDRETIADYTLVVHAESEDGMYFSTADVRIVVLDTNDNTPVFANTSY 2981
>gi|57043463|ref|XP_544300.1| PREDICTED: protocadherin beta-5 [Canis lupus familiaris]
Length = 795
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 112/256 (43%), Gaps = 51/256 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT +D+ K + ++TV V D NDN+P FSQ Y V +
Sbjct: 402 LVTERPLDRESQAEYNITITVSDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IG+VSATD D +V Y L P ++LV I G+
Sbjct: 462 ----NNSPALH------IGTVSATDRDAGANAQVTYSLLRPRDPHLPLASLVSINADNGQ 511
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ-----L 221
L + ++ +E+ V A D SP+ ++ +V + N+P VL Q
Sbjct: 512 LFALRSLDYEALQAFEVRVGAADRGSPALSSQALVRVLVLDDNDNAPFVLYPLQNGSAPC 571
Query: 222 LQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDE 281
+++ R +EA + + K + + D + F L K TE F +
Sbjct: 572 TELVPRAAEAGYLVTK------------VVAVDGDSGQNAWLSFQLLKATEPGLFGV--- 616
Query: 282 NPWITVDENGDVRVKK 297
W NG+VR +
Sbjct: 617 --WA---HNGEVRTAR 627
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 61/129 (47%), Gaps = 13/129 (10%)
Query: 52 RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVF 110
RN + + L+ +DREE +++ L +TA D ++ T V ++V+D NDN+P F
Sbjct: 183 RNRGDGRKYPELLLDKALDREEQSEFRLTLTALDGGAPPRSGTTAVRIEVVDINDNAPEF 242
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKF----SSIGSVSATDADGDKVAYKLAVPSNLVVIV 166
Q +Y + + S LNS V + G+V T GD+V VI
Sbjct: 243 LQSLYEVQIPE-NSPLNSLVVAVSAQDLDEGAYGNVVYTLFQGDEVTQPF-------VID 294
Query: 167 PQTGELLLT 175
TGE+ LT
Sbjct: 295 EITGEIRLT 303
>gi|66773266|ref|NP_001019346.1| protocadherin 2 gamma 2 precursor [Danio rerio]
gi|51557461|gb|AAU06416.1| protocadherin cluster 2 gamma 2 [Danio rerio]
Length = 948
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G++DRE +++Y++ ITATD + T ++ + V D NDN PVF Q+ YR V +
Sbjct: 405 LVTTGELDRELLSEYNITITATDEGSPPLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 464
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ K SSI SVSATD D
Sbjct: 465 ----------NNKAGSSICSVSATDPD 481
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 23/142 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV ++DRE+ + +L++TA D ++ T + V VLD NDN+PVFSQ VY+ + +
Sbjct: 195 LVLDKELDREQQKEVTLILTAVDGGTPPRSGTVAIHVTVLDANDNAPVFSQAVYKVSLPE 254
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA----VPSNLVVIVPQTGELLL 174
NS V + + +VSATDAD +V Y+ + + L + +G + +
Sbjct: 255 -----NSPVD-----TVVVTVSATDADEGQNGEVTYEFSRISKTANTLFSLDQYSGVIRV 304
Query: 175 TGDPPSD---DVEYELTVEAHD 193
G P D V YE+ +E +D
Sbjct: 305 KG--PIDFEVAVRYEMLIEGND 324
Score = 39.3 bits (90), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 20/151 (13%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
S + SGV+ V G ID E +Y ++I D G++ ++T V V++ D NDN+P+ K
Sbjct: 294 SLDQYSGVIRV-KGPIDFEVAVRYEMLIEGNDGSGLS-SDTKVIVEITDVNDNAPIIVIK 351
Query: 114 VYRFIVGDLKSSLNSNVSHWK-KFSSIGSVSATDADGD-----KVAYKLAVPSNLVVIVP 167
SLN + + +G ++ D D + + + + VP LV +
Sbjct: 352 -----------SLNIPIPESALPGTEVGIINVQDRDSENNGQVRCSIQQNVPFKLVPSIK 400
Query: 168 QTGELLLTGDPPSDDV-EYELTVEAHDLQSP 197
L+ TG+ + + EY +T+ A D SP
Sbjct: 401 NYYSLVTTGELDRELLSEYNITITATDEGSP 431
>gi|54013434|dbj|BAD60806.1| protocadherin2-gamma-v12-sCP1-2 [Danio rerio]
Length = 836
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 36 NDNHTFALKNPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG-INK 91
N +++LK PT E+++ + V ++ +DRE + ++L++ A D +
Sbjct: 161 NSLQSYSLK-PTDKFRLELQSQADGSKNVEMILQKALDREMQSSFTLLLEAFDGGDPVLS 219
Query: 92 AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD--- 148
+ + VLD NDN+PVF QK Y+ + K S + VSATD D
Sbjct: 220 GTVQIHIAVLDINDNAPVFMQKEYK----------ATATEEAPKGSILTVVSATDTDEGS 269
Query: 149 GDKVAYKL-----AVPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHD 193
+V Y + +V +++ ++ QTGEL+L G + V YELT+ A D
Sbjct: 270 NSEVTYYISDTMDSVMADMFLVNEQTGELILNGHFDYEKVSHYELTIHAKD 320
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSP 108
L+ +G D E+V+ Y L I A D G++ A V +DVLD NDNSP
Sbjct: 298 LILNGHFDYEKVSHYELTIHAKDQGGLSNA-CKVIIDVLDVNDNSP 342
>gi|301605091|ref|XP_002932182.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 2-like
[Xenopus (Silurana) tropicalis]
Length = 2766
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 20/149 (13%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVK---GINKAETHVTVDVLDENDNSPVFSQKV 114
+SGV+ + G +DREE+A Y LV+ A D G + V + + DENDN+P FS+K
Sbjct: 259 RSGVIRIL-GPVDREEIASYQLVVEANDQGHDPGPRSSTATVHITIQDENDNAPQFSEKR 317
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPS----NLVVIVPQT 169
Y V + SS+ S + V+ATD D G A ++ S L I P T
Sbjct: 318 YVARVSE-DSSIESQLL---------VVTATDCDQGANAAVHYSILSGNSRGLFSIDPLT 367
Query: 170 GELLLTGDPPSD-DVEYELTVEAHDLQSP 197
G + L G + EY L V A D P
Sbjct: 368 GAIFLAGTLDFETGREYTLRVRAQDGGRP 396
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 30/202 (14%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ G+ V + V ++ + + + Y IT GN H F++ S+ S S
Sbjct: 533 EDAAVGSSV----LTVWAADRDAYATITYQITAGNTRHRFSI----------SSLSDSQG 578
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LL + +D + Q+ L ITA+D G+ V+V D N + PVF Y V +
Sbjct: 579 LLTLALPLDYKLERQFVLTITASD--GMRSDTARAIVNVTDANTHRPVFQSSHYTVSVKE 636
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDP 178
+ + +++ +SATD D ++AY I P+TG + T +
Sbjct: 637 DQPA----------GTTVVVISATDEDTGENARIAYLAEEGLPQFAIDPETGAVTTTMEL 686
Query: 179 PSDD-VEYELTVEAHDLQSPSR 199
+D V Y L V AHD P +
Sbjct: 687 DYEDQVSYTLAVTAHDHGIPQK 708
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 88/196 (44%), Gaps = 32/196 (16%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFS 111
S +S +GV+ TSG++DRE + + +T D GI A +TV V D ND+ P F
Sbjct: 151 SLDSNTGVV-TTSGELDRETKSTHVFRVTVRD-GGIPSRTAMATLTVTVSDTNDHDPNFE 208
Query: 112 QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVV-IVP 167
Q+ YR V + N V + + +V ATD D +AY+L V I P
Sbjct: 209 QQEYRETVRE-----NMEVGY-----EVMTVRATDGDSLGNANIAYRLISGGREVFEIDP 258
Query: 168 QTGELLLTGDPPSDDV-EYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMID 226
++G + + G +++ Y+L VEA+D A V + +QDE
Sbjct: 259 RSGVIRILGPVDREEIASYQLVVEANDQGHDPGPRSSTATVHI-----TIQDE------- 306
Query: 227 RKSEAPHRIEKRRVTR 242
AP EKR V R
Sbjct: 307 -NDNAPQFSEKRYVAR 321
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
+ T+ ++D E+ Y+L +TA D K++T ++ + V+D NDN PVF + Y+ V +
Sbjct: 680 VTTTMELDYEDQVSYTLAVTAHDHGIPQKSDTTYLEILVIDVNDNPPVFQRASYKGSVPE 739
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLA--VPSNLVVIVPQTGELLLTG 176
++S+ VSATD D ++ Y A + V T ++ T
Sbjct: 740 DS----------PPYTSVLQVSATDRDSGLNGRIFYTFAGGDDGDGDFTVEYTSGIVRTL 789
Query: 177 DPPSDD--VEYELTVEAHDLQSPSRYAREPAQVWLQF-----NSPVLQDEQL 221
+ VEY LTV A D P + R PA+V + N+PV E+L
Sbjct: 790 RQLDRENVVEYRLTVYAVDKGHPLPH-RTPAEVLVTVLDVNDNAPVFAREEL 840
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 72/173 (41%), Gaps = 23/173 (13%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI GN F++ +P T I +G +D E +Y+L + A D
Sbjct: 348 VHYSILSGNSRGLFSI-DPLTGAI------------FLAGTLDFETGREYTLRVRAQDGG 394
Query: 88 --GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
++ V + VLD NDN+P F+ G ++S+ N + ++ A
Sbjct: 395 RPPLSNVTGLVIIQVLDVNDNAP-------NFVSGPFQASVLENAPIGYSVLQVQALDAD 447
Query: 146 DADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSP 197
D ++ Y L+ + I TG +++ + +++E Y VE D P
Sbjct: 448 SGDNARLDYCLSGTTGPFSINNSTGWIMIQTELDREEIEFYNFIVEVWDRGQP 500
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKG---INKAETHVTVDVLDENDNSPVF 110
+ E SG++ T +DRE V +Y L + A D KG ++ V V VLD NDN+PVF
Sbjct: 778 TVEYTSGIVR-TLRQLDRENVVEYRLTVYAVD-KGHPLPHRTPAEVLVTVLDVNDNAPVF 835
Query: 111 SQK 113
+++
Sbjct: 836 ARE 838
>gi|443718021|gb|ELU08813.1| hypothetical protein CAPTEDRAFT_226075 [Capitella teleta]
Length = 1036
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 12/116 (10%)
Query: 36 NDNHTFALKNPTTH-EIRNSTESKSGVLLVTSGDIDREEVAQYSL-VITATDVKGINKAE 93
N + AL+NP ++ N + S++ LVTS +DRE +AQY++ V+ A + +
Sbjct: 400 NSFFSCALENPDFQLDVVNESPSEAEYTLVTSRSLDREVIAQYAMKVVCADQGDPVRTSS 459
Query: 94 THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
T + V+VLD NDN P FSQ Y V + + + + + V+A+D D
Sbjct: 460 TDIVVNVLDVNDNLPFFSQPFYSADVAE----------NLPRGTEVAVVTASDPDA 505
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI-NKAETHVTVDVLDENDNSPVFSQ 112
S +S++G++ VT G++DRE+ Y L++TA D +G+ +E V V VLD+NDN+P+ +
Sbjct: 306 SIDSQTGLVTVT-GELDREDREMYELLVTAQDKQGVWLPSEAKVRVTVLDQNDNAPLVTI 364
Query: 113 KV 114
V
Sbjct: 365 HV 366
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 18/145 (12%)
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGINKAET---HVTVDVLDENDNSPVFSQKVYR 116
G+ +V ++DRE+ Y + I A D G A T +T+ V D ND+ P F+Q ++
Sbjct: 203 GLYIVLKQELDREDRDLYQMTIAALD--GGVPARTGTLALTISVQDVNDHPPQFTQPLF- 259
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPS-----NLVVIVPQTGE 171
+ + N + + +S+ +V + + + Y + + I QTG
Sbjct: 260 ------TAEVEENAASGEVVTSVAAVDEDEGENGVIVYSFDAKTVQDYGGVFSIDSQTGL 313
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQ 195
+ +TG+ +D E YEL V A D Q
Sbjct: 314 VTVTGELDREDREMYELLVTAQDKQ 338
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 76/162 (46%), Gaps = 27/162 (16%)
Query: 69 IDREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E++ Y+LV+ A D G A + V V+++D ND +PVF+ Y + +L
Sbjct: 537 LDHEQIQNYTLVVIAED-HGSPPANSTVKVIVNIVDLNDEAPVFTLSKYTMGINEL---- 591
Query: 127 NSNVSHWKKFSS-IGSVSATDAD----GDKVAYKLAVPSNL--VVIVPQ-TGELLL-TGD 177
+F S IG V+A D D G+ V Y L P+++ V V Q +GE+ T
Sbjct: 592 -------AEFGSKIGQVAARDPDSVSTGEPV-YTLVGPADIHQVFSVSQNSGEIFTKTAL 643
Query: 178 PPSDDVEYELTVEAHDLQSPSRYAREPAQVWL---QFNSPVL 216
Y V+A D + PS + ++L N+PV+
Sbjct: 644 DRETTPGYSFIVKASDAEDPSLSSTATVSIYLIDANDNAPVI 685
>gi|66773254|ref|NP_001019351.1| protocadherin 2 gamma 7 precursor [Danio rerio]
gi|51557478|gb|AAU06424.1| protocadherin cluster 2 gamma 7 [Danio rerio]
Length = 935
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G++DRE +++Y++ ITATD + T ++ + V D NDN PVF Q+ YR V +
Sbjct: 392 LVTTGELDRELLSEYNITITATDEGSPPLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 451
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ K SSI SVSATD D
Sbjct: 452 ----------NNKAGSSICSVSATDPD 468
Score = 42.0 bits (97), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 66/131 (50%), Gaps = 27/131 (20%)
Query: 76 QYSLVITATDVKGINKAET---HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSH 132
+ +L++TA D ++ T HVTV LD NDN+PVFSQ VY+ + + NS V
Sbjct: 195 ELTLILTAVDGGTPPRSGTVAIHVTV--LDANDNAPVFSQAVYKVSLPE-----NSPVD- 246
Query: 133 WKKFSSIGSVSATDAD---GDKVAYKLAVPSN----LVVIVPQTGELLLTGDPP---SDD 182
+ + +VSATDAD +V Y + S + + P G++ + G P D+
Sbjct: 247 ----TVVVTVSATDADEGQNGEVTYAFSRISGKARKMFSLDPDIGDIRVAG--PLDFEDE 300
Query: 183 VEYELTVEAHD 193
YEL VE D
Sbjct: 301 SVYELRVEGKD 311
>gi|190336742|gb|AAI62537.1| Pcdh2g12 protein [Danio rerio]
Length = 946
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G++DRE +++Y++ ITATD + T ++ + V D NDN PVF Q+ YR V +
Sbjct: 404 LVTTGELDRELLSEYNITITATDEGSPPLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 463
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ K SSI SVSATD D
Sbjct: 464 ----------NNKAGSSICSVSATDPD 480
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE+ + +L++TA D ++ T + V VLD NDN+PVFSQ VY+ + +
Sbjct: 194 LVLERQLDREQQKEVTLILTAVDGGTPPRSGTVAIHVTVLDANDNAPVFSQAVYKVSLPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA-VPSNLVVIVP---QTGELLL 174
NS V + + +VSA DAD +V Y+ + N + I +G++ L
Sbjct: 254 -----NSPVD-----TVVVTVSANDADEGQNGEVTYEFGHISENDITIFSLDQNSGKITL 303
Query: 175 TGDPP-SDDVEYELTVEAHD 193
G D+ +EL ++A D
Sbjct: 304 IGSLDYEDEASFELPIQATD 323
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 19/138 (13%)
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
G +D E+ A + L I ATD G+ T V +DV D NDNSP+ K SL
Sbjct: 305 GSLDYEDEASFELPIQATDGLGLVSYST-VVIDVSDINDNSPIIIVK-----------SL 352
Query: 127 NSNVSHWK-KFSSIGSVSATDADGD-----KVAYKLAVPSNLVVIVPQTGELLLTGDPPS 180
N + + +G ++ D D + + + + VP LV + L+ TG+
Sbjct: 353 NIPIPESALPGTEVGIINVQDRDSENNGQVRCSIQQNVPFKLVPSIKNYYSLVTTGELDR 412
Query: 181 DDV-EYELTVEAHDLQSP 197
+ + EY +T+ A D SP
Sbjct: 413 ELLSEYNITITATDEGSP 430
>gi|426231041|ref|XP_004009557.1| PREDICTED: protocadherin beta-16 [Ovis aries]
Length = 752
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 79/163 (48%), Gaps = 30/163 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DREE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTERTLDREERAEYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLWVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYK-------LAVPSNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L ++LV I P G
Sbjct: 463 ----NNSPALH------IGSVSATDTDAGANAQVTYSLLPPPDPLLPLASLVSINPDNGH 512
Query: 172 LL-LTGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWL 209
L LT S D E +E V A D SP+ ++ +V +
Sbjct: 513 LFALT----SLDYEALRAFEFRVGATDRGSPALSSQALVRVLV 551
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 27/144 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV ++DREE + SL +TA D + T V ++V+D NDN+P F Q +Y+
Sbjct: 194 LVLDKELDREEEPEISLTLTALDGGSPPRYGTAQVRIEVVDINDNAPQFQQLLYKV---- 249
Query: 122 LKSSLNSNVSHWKKFSSIGS----VSATDADG---DKVAYKLAVP----SNLVVIVPQTG 170
H + S +GS VSA+D D K++Y P S + + P+TG
Sbjct: 250 ----------HIPENSPVGSLVVTVSASDVDSGLYGKISYTFFQPSEDISKTLEVNPETG 299
Query: 171 ELLLTGDPPSDDV-EYELTVEAHD 193
E+ L + V YE+ V+A D
Sbjct: 300 EIRLRKQIDFETVLSYEVDVKATD 323
>gi|27693124|gb|AAH41846.1| Cadherin 3, type 1, P-cadherin (placental) [Homo sapiens]
gi|190690229|gb|ACE86889.1| cadherin 3, type 1, P-cadherin (placental) protein [synthetic
construct]
gi|190691603|gb|ACE87576.1| cadherin 3, type 1, P-cadherin (placental) protein [synthetic
construct]
Length = 829
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 252 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 303
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+P+F + Y
Sbjct: 304 DGDGSTTTAVAVVEILDANDNAPMFDPQKY 333
Score = 37.4 bits (85), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DREE+A+Y L A G + + ++++ V D+ND+ P F+Q
Sbjct: 159 AVEKETGWLLLNK-PLDREEIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQ 217
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAV 158
+R V L+ L +S+ ++ATD D Y V
Sbjct: 218 DTFRGSV--LEGVLPG--------TSVMQMTATDEDDAIYTYNGVV 253
>gi|190337986|gb|AAI62470.1| Pcdh2g9 protein [Danio rerio]
Length = 958
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G++DRE +++Y++ ITATD + T ++ + V D NDN PVF Q+ YR V +
Sbjct: 415 LVTTGELDRELLSEYNITITATDEGSPPLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 474
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ K SSI SVSATD D
Sbjct: 475 ----------NNKAGSSISSVSATDPD 491
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 82/162 (50%), Gaps = 24/162 (14%)
Query: 44 KNPTTHEIRNS-TESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET---HVTVD 99
+NP NS T+ V LV ++DRE+ L++TA D ++ T HVTV
Sbjct: 185 RNPNFILAVNSRTDGSRFVELVLDKELDREQQKDVRLILTAVDGGTPPRSGTVAIHVTV- 243
Query: 100 VLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL 156
LD NDN+PVFSQ VY+ + + NS V + + +VSATDAD +V Y+
Sbjct: 244 -LDANDNAPVFSQAVYKVSLPE-----NSPVD-----TVVVTVSATDADEGQNGEVTYEF 292
Query: 157 AVPSN----LVVIVPQTGELLLTGDPP-SDDVEYELTVEAHD 193
S+ + QTG++++ G D+ YE+ VEA D
Sbjct: 293 GHLSDSAREAFSLDHQTGQIVVKGRIDFEDESRYEIIVEAKD 334
>gi|410917772|ref|XP_003972360.1| PREDICTED: protocadherin-23-like [Takifugu rubripes]
Length = 3262
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 78/177 (44%), Gaps = 38/177 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
VRYSI + N + S E +SG L+ T+ +DRE + Q ++ A D
Sbjct: 487 VRYSILRSNQDGLV------------SIEPESG-LITTAAPLDREALEQLWFLVVAADGG 533
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+ + T VTV VLD NDN PVF Q++Y V + H S V ATD
Sbjct: 534 EPSLSSTATVTVLVLDVNDNEPVFQQQLYNATVPE----------HSGVGSCFLQVVATD 583
Query: 147 ADGDKVAYKLAVPSN---------LVVIVPQTGELLLTGDPPSDDVEYELTVEAHDL 194
AD + L S+ L + PQTGEL + S D++ +L HD+
Sbjct: 584 ADSREFGTLLYSLSDGFDGQERHPLFHVQPQTGELCV-----SQDIDRDLGQTVHDI 635
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 65/120 (54%), Gaps = 17/120 (14%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+GV+ +T +D EE A+Y+L + A+D +++ V V VLD NDN+PVFS+ Y+
Sbjct: 2291 TGVVTLTQA-LDYEEQAEYTLTVLASD--SLHQTSGEVKVQVLDVNDNAPVFSKDSYQVD 2347
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYK-LAVPSNLVVIVPQTGELLL 174
+ +L ++ + + SVSATD D ++ Y+ L+ PS I +G + +
Sbjct: 2348 LSELAAA----------DTLVLSVSATDRDSGLNGEITYRLLSSPSQGFYIQADSGSVFI 2397
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 30/178 (16%)
Query: 6 SGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVT 65
SG G L ++ + + YS++ G D ++P H + ++G L V
Sbjct: 570 SGVGSCFLQVVATDADSREFGTLLYSLSDGFDGQE---RHPLFH-----VQPQTGELCV- 620
Query: 66 SGDIDREEVAQ--YSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLK 123
S DIDR+ + Q + ++I A D G++ A+T+V V+V D ND++PVF+ Y +
Sbjct: 621 SQDIDRD-LGQTVHDILIRAEDPGGLS-AQTYVHVEVEDLNDHAPVFNPDEYTVSIS--- 675
Query: 124 SSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVP---SNLVVIVPQTGELLLT 175
SH + + + +V ATD D + V Y + +P S L + PQTG L LT
Sbjct: 676 -------SHAQPGAELLNVIATDRDSGRFGQVTYDI-IPGDGSGLFDVDPQTGTLTLT 725
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 56/119 (47%), Gaps = 14/119 (11%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
KSG L + S ++D E + + + A A +TV VLD NDN+PVFS +VY F
Sbjct: 1030 KSGWLYL-SHNLDYETESTFRCRVLARASPANATATAELTVSVLDVNDNAPVFSSEVYHF 1088
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVIVPQTGELL 173
V + S +G+VSA D D +++Y L I +TGE++
Sbjct: 1089 TVSEAPSPQG----------LVGTVSAVDKDSGINAQLSYILLSDGKFFRINAKTGEII 1137
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 16/91 (17%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD- 85
LV Y+I GN F L E K+G+L + S +D E + L I A D
Sbjct: 1544 LVSYTILTGNTKGVFTL------------EEKTGLLFL-SAPLDYEAQRLHHLTIRAADH 1590
Query: 86 -VKGINKAETHVTVDVLDENDNSPVFSQKVY 115
+ ++ +T TV+V D ND SPVFSQ +Y
Sbjct: 1591 GLPPLSSTQT-FTVEVGDVNDRSPVFSQNIY 1620
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 26/148 (17%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS++GT + + A+ Q V YSI GN++ F++ N T EIR +
Sbjct: 2042 ENSRAGTWITKVE---ATGRADSRQSVVYSIFSGNEHSLFSI-NHHTGEIRVQKDYA--- 2094
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+D E LV+ A + G+ V++ +LD NDN+P F YR V +
Sbjct: 2095 -------LDFELSPHIHLVVLAEN--GLQTTHCRVSISLLDVNDNAPRFDYSSYRTAVWE 2145
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG 149
++ + I V A+DADG
Sbjct: 2146 GQA----------HNTYIMQVFASDADG 2163
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I QGN+ F+L+ ++ + ++ LV +DRE Y L ++ D +GI
Sbjct: 2482 YAIIQGNEERRFSLE---VRLVQVENQWRNVGKLVLCNPLDRETTESYVLTVSVAD-RGI 2537
Query: 90 NKAETH--VTVDVLDENDNSPVFSQKVY 115
+ V V V D NDN+PVFS Y
Sbjct: 2538 PPLNSSAVVMVTVADCNDNAPVFSSTEY 2565
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 69/163 (42%), Gaps = 42/163 (25%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ V YS+T+ + + F S +S +G + T +DRE AQY++ A
Sbjct: 1855 PNGHVTYSLTEDSSHGAF------------SVDSLTGAIRTTRS-LDREGRAQYTIRAVA 1901
Query: 84 TDVKGINKAETH----VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS- 138
TD G + H VT+ V D NDN PV Q ++ W +
Sbjct: 1902 TD--GCTRGPLHSVAPVTILVEDVNDNVPVCDQN---------------PINGWVSMRTL 1944
Query: 139 ----IGSVSATDAD-GDKVAYKLAVP--SNLVVIVPQTGELLL 174
+ +V+A D D G+ A+P NL I +TGE+ L
Sbjct: 1945 PNQIVATVTAEDGDQGENGTLLFALPDEENLFAINSETGEISL 1987
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 57 SKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVY 115
S+SGV+ T+ +DREE Y+L I A + + T + + +LD+NDN+P FS+K Y
Sbjct: 1771 SRSGVV-STTKVLDREEKQNYTLTIWARNYGPAPLSSSTQLQLVLLDQNDNAPSFSRKSY 1829
Query: 116 R 116
+
Sbjct: 1830 Q 1830
>gi|301753525|ref|XP_002912647.1| PREDICTED: protocadherin beta-17-like [Ailuropoda melanoleuca]
Length = 796
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 94/197 (47%), Gaps = 32/197 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT TD+ K + +++V V D NDN+P FSQ Y V +
Sbjct: 404 LVTEVPLDRERQAEYNITITVTDLGTPRLKTQHNLSVTVSDVNDNAPAFSQSSYTLRVRE 463
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP--------SNLVVIVPQTG 170
NS H IGSVSATD D +V Y L +P ++LV I G
Sbjct: 464 ----NNSPALH------IGSVSATDRDAGANAQVTYSLLLPPHDPHLPLASLVSINADNG 513
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ----- 220
+L + ++ +E V A D SP+ ++ +V + N+P VL Q
Sbjct: 514 QLFALRALDYEALQAFEFGVRAADRGSPALSSQALVRVLVVDDNDNAPFVLYPLQNGSAP 573
Query: 221 LLQMIDRKSEAPHRIEK 237
+++ R +EA + + K
Sbjct: 574 CTELVPRAAEAGYLVTK 590
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 13/117 (11%)
Query: 35 GNDNHTFALKNPTTH-EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA- 92
G N+T + NP H ++++S + + L+ +DRE+ ++ L +TA D ++
Sbjct: 166 GVQNYTLS-PNPYFHLKLQDSDDGRKYPELLLDQSLDREKEPEFRLTLTALDGGSPPRSG 224
Query: 93 ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
T V + VLD NDN+P F + VY V + NS V S + VSATD D
Sbjct: 225 TTLVHILVLDINDNAPEFERPVYEVQVPE-----NSPVD-----SLVVRVSATDLDA 271
>gi|84370031|ref|NP_001018614.2| protocadherin 1 gamma b 9 precursor [Danio rerio]
gi|54013428|dbj|BAD60803.1| protocadherin2-gamma-v12-A [Danio rerio]
Length = 937
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 24/171 (14%)
Query: 36 NDNHTFALKNPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG-INK 91
N +++LK PT E+++ + V ++ +DRE + ++L++ A D +
Sbjct: 161 NSLQSYSLK-PTDKFRLELQSQADGSKNVEMILQKALDREMQSSFTLLLEAFDGGDPVLS 219
Query: 92 AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD--- 148
+ + VLD NDN+PVF QK Y+ + K S + VSATD D
Sbjct: 220 GTVQIHIAVLDINDNAPVFMQKEYK----------ATATEEAPKGSILTVVSATDTDEGS 269
Query: 149 GDKVAYKL-----AVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
+V Y + +V +++ ++ QTGEL+L G + V YELT+ A D
Sbjct: 270 NSEVTYYISDTMDSVMADMFLVNEQTGELILNGHFDYEKVSHYELTIHAKD 320
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSP 108
L+ +G D E+V+ Y L I A D G++ A V +DVLD NDNSP
Sbjct: 298 LILNGHFDYEKVSHYELTIHAKDQGGLSNA-CKVIIDVLDVNDNSP 342
>gi|395736292|ref|XP_002816064.2| PREDICTED: protocadherin gamma-B2 [Pongo abelii]
Length = 824
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 96/206 (46%), Gaps = 34/206 (16%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQK 113
+ SK+ LVT G +DREE+ +Y+L ITATD K + VT+ + D NDN+PVF Q
Sbjct: 409 SSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPLSSSIIVTLHISDVNDNAPVFQQT 468
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL-------- 162
Y V + + +SI +SA+D D +V+Y + V S+L
Sbjct: 469 SYMVHVAE----------NNPPGASIAQISASDPDLGPNGQVSYSI-VASDLKPREILSY 517
Query: 163 VVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVL-- 216
V + Q+G + + + +ELT++A D SP+ A +V L N+P +
Sbjct: 518 VSVSAQSGVVFAQRAFDHEQLRAFELTLQARDKGSPALSANVSLRVLVGDLNDNAPRVLY 577
Query: 217 -----QDEQLLQMIDRKSEAPHRIEK 237
L M+ R +E + + K
Sbjct: 578 PALGPDGSALFDMVPRAAEPGYLVTK 603
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++K GT P L S P+ L RY + NDN F L T + R E
Sbjct: 157 ESTKPGTTFPLDPAL--DSDVGPNSLQRYHL---NDNEYFDLAEKQTPDGRKYPE----- 206
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYR 116
L+ +DREE + + LV+TA D ++ T + + V D NDN PVFSQ VYR
Sbjct: 207 -LILKHSLDREEHSFHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYR 261
>gi|9256616|ref|NP_061761.1| protocadherin beta-4 precursor [Homo sapiens]
gi|13431376|sp|Q9Y5E5.1|PCDB4_HUMAN RecName: Full=Protocadherin beta-4; Short=PCDH-beta-4; Flags:
Precursor
gi|5457043|gb|AAD43758.1|AF152497_1 protocadherin beta 4 [Homo sapiens]
gi|14009471|gb|AAK51621.1|AF217754_1 protocadherin-beta4 [Homo sapiens]
gi|66990079|gb|AAH98139.1| Protocadherin beta 4 [Homo sapiens]
gi|68226683|gb|AAH98346.1| Protocadherin beta 4 [Homo sapiens]
gi|119582384|gb|EAW61980.1| protocadherin beta 4 [Homo sapiens]
gi|168277856|dbj|BAG10906.1| protocadherin beta 4 precursor [synthetic construct]
Length = 795
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 37 DNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETH 95
DN F LK PT K+ LVT +DRE A+Y++ I TD+ K + +
Sbjct: 386 DNLPFILK-PTL---------KNFYTLVTERPLDRETSAEYNITIAVTDLGTPRLKTQQN 435
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KV 152
+TV V D NDN+P F+Q Y V + NS H IGSVSATD D +V
Sbjct: 436 ITVQVSDVNDNAPAFTQTSYTLFVRE----NNSPALH------IGSVSATDRDSGTNAQV 485
Query: 153 AYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
Y L P ++LV I G L + ++ +E V A D SP+
Sbjct: 486 TYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGASDRGSPA 539
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 1 MENSKSGTGVKGLPILVASSHK-HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKS 59
+ENS+ GT P+L+A + L +Y+I+ + H RN +E K
Sbjct: 142 LENSQPGTL---FPLLIAEDLDVGSNGLQKYTISPNSHFHILT---------RNHSEGKK 189
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVY 115
LV +DREE ++SL + A D ++ T V + ++D NDN+P F Y
Sbjct: 190 YPDLVQDKPLDREEQPEFSLTLVALDGGSPPRSGTVMVRILIMDINDNAPEFVHTPY 246
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 77/177 (43%), Gaps = 31/177 (17%)
Query: 28 VRYSITQGND--NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
V Y + Q +D TF++ N T EI + +D E++ Y + I ATD
Sbjct: 276 VSYGLFQASDEIKQTFSI-NEVTGEI------------LLKKKLDFEKIKSYHVEIEATD 322
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G++ T V ++V+D NDN P I+ L SS+ N + SI +
Sbjct: 323 GGGLSGKGT-VVIEVVDVNDNPP-------ELIISSLTSSIPENAP--ETVVSIFRIRDR 372
Query: 146 DADGDKVAYKLAVPSNLVVIVPQTGE--LLLTGDPPSD---DVEYELTVEAHDLQSP 197
D+ G+ ++P NL I+ T + L + P D EY +T+ DL +P
Sbjct: 373 DS-GENGKMICSIPDNLPFILKPTLKNFYTLVTERPLDRETSAEYNITIAVTDLGTP 428
>gi|35323|emb|CAA45177.1| p-cadherin [Homo sapiens]
gi|119603644|gb|EAW83238.1| cadherin 3, type 1, P-cadherin (placental), isoform CRA_b [Homo
sapiens]
gi|189069113|dbj|BAG35451.1| unnamed protein product [Homo sapiens]
gi|226518|prf||1516312A Ca dependent cell adhesion protein
Length = 829
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 252 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 303
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+P+F + Y
Sbjct: 304 DGDGSTTTAVAVVEILDANDNAPMFDPQKY 333
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DREE+A+Y L A G + + ++++ V D+ND+ P F+Q
Sbjct: 159 AVEKETGWLLLNK-PLDREEIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQ 217
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAV 158
+R V L+ L +S+ V+ATD D Y V
Sbjct: 218 DTFRGSV--LEGVLPG--------TSVMQVTATDEDDAIYTYNGVV 253
>gi|14589891|ref|NP_001784.2| cadherin-3 preproprotein [Homo sapiens]
gi|146345382|sp|P22223.2|CADH3_HUMAN RecName: Full=Cadherin-3; AltName: Full=Placental cadherin;
Short=P-cadherin; Flags: Precursor
gi|261858884|dbj|BAI45964.1| cadherin 3, type 1, P-cadherin [synthetic construct]
Length = 829
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 252 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 303
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+P+F + Y
Sbjct: 304 DGDGSTTTAVAVVEILDANDNAPMFDPQKY 333
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DREE+A+Y L A G + + ++++ V D+ND+ P F+Q
Sbjct: 159 AVEKETGWLLLNK-PLDREEIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQ 217
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAV 158
+R V L+ L +S+ V+ATD D Y V
Sbjct: 218 DTFRGSV--LEGVLPG--------TSVMQVTATDEDDAIYTYNGVV 253
>gi|47222857|emb|CAF96524.1| unnamed protein product [Tetraodon nigroviridis]
Length = 482
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 20/118 (16%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGIN---KAETHVTVDVLDENDNSPVFSQKVY 115
+G+++ D+DRE +Y LV+ ATD+ G T VT+ + D NDN P F QK+Y
Sbjct: 187 TGIIMTAVADLDRETQDRYELVVKATDMAGQMGGLSGSTTVTIVITDVNDNPPRFPQKMY 246
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELL 173
+F V S + V +++G V ATDAD + +++ ++ GEL
Sbjct: 247 QFSV-----SEGAAVG-----TAVGRVIATDAD-------MGENTDMTYLIKDGGELF 287
>gi|410948483|ref|XP_003980968.1| PREDICTED: protocadherin beta-14-like [Felis catus]
Length = 683
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 22/164 (13%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYR 116
K+ LV+ +DRE ++Y++ IT TD+ K + ++TV V D NDN+P FSQ Y
Sbjct: 398 KNFFTLVSEKALDRETRSEYNITITVTDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYT 457
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIV 166
V + NS H IGSVSATD D +V Y L P++ LV I
Sbjct: 458 LRVRE----NNSPALH------IGSVSATDRDSGANAQVTYSLLPPADPQLPLASLVSIN 507
Query: 167 PQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL 209
G+L + ++ +E V A D SP+ ++ +V +
Sbjct: 508 ADNGQLFALRSLDYEALQAFEFGVRAADRGSPALSSQARVRVLV 551
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 38 NHTFALKNPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK-AE 93
N+T + P +H +IR+S + K LV +D EE + +L + A D +
Sbjct: 169 NYTLS---PNSHFYIKIRDSGDGKIYPELVLDRALDHEEEPELTLTLIALDGGSPPRTGT 225
Query: 94 THVTVDVLDENDNSPVFSQKVY 115
T V + VLD NDN+P F+Q++Y
Sbjct: 226 TLVLIKVLDINDNAPEFAQRLY 247
>gi|397517990|ref|XP_003846123.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B2 [Pan
paniscus]
Length = 811
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 34/206 (16%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQK 113
+ SK+ LVT G +DREE+ +Y+L ITATD K + VT+ + D NDN+PVF Q
Sbjct: 396 SSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPLSSSIIVTLHISDVNDNAPVFQQT 455
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL-------- 162
Y V + + +SI +SA+D D +V+Y + V S+L
Sbjct: 456 SYMVHVAE----------NNPPGASIAQISASDPDLGPNGQVSYSI-VASDLKPREILSY 504
Query: 163 VVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVW---LQFNSP-VL- 216
V + Q+G + + + +ELT++A D SP+ A +V L N+P VL
Sbjct: 505 VSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLNDNAPRVLY 564
Query: 217 -----QDEQLLQMIDRKSEAPHRIEK 237
L M+ R +E + + K
Sbjct: 565 PALGSDGSALFDMVPRAAEPGYLVTK 590
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++K GT P L S P+ L RY + NDN F L T + R E
Sbjct: 144 ESTKPGTTFPLDPAL--DSDVGPNSLQRYHL---NDNEYFDLAEKQTPDGRKYPE----- 193
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYR 116
L+ +DREE + + LV+TA D ++ T + + V D NDN PVFSQ VYR
Sbjct: 194 -LILQHSLDREEHSLHQLVLTAVDGGDPPQSGTTQIRIKVTDANDNPPVFSQDVYR 248
>gi|327270417|ref|XP_003219986.1| PREDICTED: protocadherin gamma-A8-like [Anolis carolinensis]
Length = 822
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + + L++ A+D K+ T + V VLD NDN+PVFSQ VY V +
Sbjct: 196 LVLEKPLDREEQSVHDLILIASDGGDPMKSGTLQIHVIVLDANDNAPVFSQSVYEVTVKE 255
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL----AVPSNLVVIVPQTGELLL 174
N+ W S++ ++ ATD D ++ Y S ++++ TGE+++
Sbjct: 256 -------NIPKW---STVATIRATDLDEGTSGQIKYSFEDVTKKLSKMIMLNSTTGEIIV 305
Query: 175 TGDPPSDDVE-YELTVEAHD 193
G+ + YE VEA D
Sbjct: 306 VGNFDYEKSSLYEFEVEAVD 325
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVY 115
LVT +DREEVA Y++ ITA D +GI T +++ VLD NDN P+F + Y
Sbjct: 406 LVTEKSLDREEVAVYNITITAVD-EGIPTLSTSEIISLKVLDTNDNPPLFVKSTY 459
>gi|198421140|ref|XP_002120840.1| PREDICTED: hypothetical protein, partial [Ciona intestinalis]
Length = 2746
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 67/134 (50%), Gaps = 20/134 (14%)
Query: 69 IDREEVAQYSLVITATDVKGIN------KAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+D E Y+ +TAT ++ VT+DV D NDNSP+F+++ Y+F
Sbjct: 316 LDHETQDFYTFKVTATGFPSVSIFADSCYVNADVTIDVTDVNDNSPIFTKQTYKF----- 370
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDADG-DKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD 181
S+ N++ S +G VSATD D D V Y AV SN I TG ++ T P
Sbjct: 371 --SIEENLAGG---SEVGIVSATDVDANDDVFYTFAVDSNKFSINRATG-VVTTLVPLDH 424
Query: 182 DV--EYELTVEAHD 193
D+ E+ L V+A D
Sbjct: 425 DIIKEHSLLVQASD 438
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 102/247 (41%), Gaps = 39/247 (15%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD----VKGINKAETHVTVDVLDENDNSPVFSQK 113
++G L+V +G IDRE+V QY LV+ TD + A HV V D NDN+P F +
Sbjct: 724 ETGELIVDAG-IDREDVDQYILVVNVTDGSLTSPLFSSASAHVIVR--DVNDNAPRFIGR 780
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL-AVPSNL------- 162
F+ D I +SA DAD +V Y + +V S++
Sbjct: 781 HVTFVAEDEPVGF-----------PISQISAEDADAGTNGRVVYSIVSVTSDIGRSIEEM 829
Query: 163 --VVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQ 220
+ P TG L + + ++YE + S S A +P + F V
Sbjct: 830 SYFHVDPNTGVLTV-----AKQLDYERSKTHFINVSASDLAPQPQTTYQMFTIHVTDVND 884
Query: 221 LLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRD 280
+ +R++ IE + + V +D E GE G + + L+ +E E F I
Sbjct: 885 IAPHFERETYEAEVIEGQSIGTIVTRVTALD--EDSGE-NGIVTYELQPSSETEAFLIDP 941
Query: 281 ENPWITV 287
N IT+
Sbjct: 942 TNGVITL 948
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 67/143 (46%), Gaps = 24/143 (16%)
Query: 69 IDREEVAQYSLVITATDVKGIN---KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+D E + +S+ + A+DV G+N + V V D NDNSPVF Q+ Y ++ +L
Sbjct: 1610 LDFEIIENFSITVQASDV-GLNVTHNVSEELYVVVTDVNDNSPVFRQQSYHTLLPELS-- 1666
Query: 126 LNSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSN-LVVIVPQTGELLLTGDP- 178
S + +V ATD D ++ Y+L +P+ + VI P TGE+
Sbjct: 1667 --------PPHSHVITVEATDLDSGENGRITYRLDNVLPNKPIFVIDPDTGEITTNKSEA 1718
Query: 179 --PSDDVEYELTVEAHDLQSPSR 199
P V + L +EA D P R
Sbjct: 1719 LNPQSSV-FNLEIEAFDHGVPPR 1740
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVK--GINKAETHVTVDVLDENDNSPVFS 111
S ++ +GVL TS +DRE Y+ +TA D G + VT+ V D NDN PVF
Sbjct: 1161 SVDTMTGVL-TTSTTLDREVKGSYNFFVTAVDAAPYGPRSSMVPVTITVTDVNDNPPVFD 1219
Query: 112 QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAV 158
+ + I+ ++ S++ + + V ATDAD +V Y+ V
Sbjct: 1220 ESL---ILVNISRSISPGM-------EVARVRATDADSGLYGEVTYRCVV 1259
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 24/122 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-V 86
V YSI+ GN F+L NP++ E L + +DRE + Y L + A+D
Sbjct: 1037 VTYSISGGNIGGDFSL-NPSSGE------------LSITRRLDRESTSSYQLQVVASDNG 1083
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+ + A + + VLD NDN P F++ Y G ++ L K + +V ATD
Sbjct: 1084 EPVRSASGLIDITVLDWNDNDPQFTETAYS---GQVEEGL-------TKGQYVLTVRATD 1133
Query: 147 AD 148
AD
Sbjct: 1134 AD 1135
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 104/255 (40%), Gaps = 63/255 (24%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D + + ++SL++ A+D G + AE+ + + V D NDNSP F + S++S
Sbjct: 422 LDHDIIKEHSLLVQASD--GKHLAESMLRITVNDINDNSPQFLMTSSEHLA---VVSVDS 476
Query: 129 NVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-LVVIVPQTGEL-----LLTGDPP 179
+ W + S+ A D D + +V+Y + N + I TG + LLTG
Sbjct: 477 EIGSW-----VASLKAADKDSNLNGQVSYTMTSQDNQMFRIDGNTGSIMVNTALLTG--- 528
Query: 180 SDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNS--PVLQDEQLLQMIDRKSEAPHRI-- 235
Y + V A D SPSR+ Q+ ++ +S P D+ +S P I
Sbjct: 529 ----LYTVHVNAQDQGSPSRHESAILQIRVRTSSDNPAEFDQNKFVFCPIESSNPGSILG 584
Query: 236 --------EKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
+++R + P I S DG VF + K T
Sbjct: 585 TFGSTASNQRQRRSVTTFPQYEI-VSSNDGS-----VFHVNKTT---------------- 622
Query: 288 DENGDVRVKKRWDFE 302
G+V + +R DFE
Sbjct: 623 ---GEVMLLQRLDFE 634
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ ++ Y I GN F ++ N ++ L +GD+DRE +Y L++ A
Sbjct: 1793 NNVIMYRIISGNTGGAFKIRT------LNGPGKQTLGELCVAGDLDRETTDRYFLIVAAI 1846
Query: 85 DVKGINKAETHVTV--DVLDENDNSPVFSQKVY 115
D +G ++ TV +V D NDN P F++ Y
Sbjct: 1847 D-QGTPSLSSNATVVINVRDVNDNRPRFNKTSY 1878
>gi|66773270|ref|NP_001019344.1| protocadherin 2 gamma 12 precursor [Danio rerio]
gi|51557417|gb|AAU06395.1| protocadherin cluster 2 gamma 12 [Danio rerio]
Length = 946
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G++DRE +++Y++ ITATD + T ++ + V D NDN PVF Q+ YR V +
Sbjct: 404 LVTTGELDRELLSEYNITITATDEGSPPLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 463
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ K SSI SVSATD D
Sbjct: 464 ----------NNKAGSSICSVSATDPD 480
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 70/140 (50%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE+ + +L++TA D + + V VLD NDN+PVFSQ VY+ + +
Sbjct: 194 LVLERQLDREQQKEVTLILTAVDGGTPLRSGTVAIHVTVLDANDNAPVFSQAVYKVSLPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA-VPSNLVVIVP---QTGELLL 174
NS V + + +VSATDAD +V Y+ + N + I +G + L
Sbjct: 254 -----NSPVD-----TVVVTVSATDADEGQNGEVTYEFGHISENDITIFSLDQNSGRITL 303
Query: 175 TGDPP-SDDVEYELTVEAHD 193
G D+ +EL ++A D
Sbjct: 304 IGSLDYEDEASFELPIQATD 323
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 19/138 (13%)
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
G +D E+ A + L I ATD G+ T V +DV D NDNSP+ K SL
Sbjct: 305 GSLDYEDEASFELPIQATDGLGLVSYST-VVIDVSDINDNSPIIIVK-----------SL 352
Query: 127 NSNVSHWK-KFSSIGSVSATDADGD-----KVAYKLAVPSNLVVIVPQTGELLLTGDPPS 180
NS V + +G ++ D D + + + + VP LV + L+ TG+
Sbjct: 353 NSPVPESALPGTEVGIINVQDRDSENNGQVRCSIQQNVPFKLVPSIKNYYSLVTTGELDR 412
Query: 181 DDV-EYELTVEAHDLQSP 197
+ + EY +T+ A D SP
Sbjct: 413 ELLSEYNITITATDEGSP 430
>gi|332234734|ref|XP_003266559.1| PREDICTED: protocadherin beta-16 [Nomascus leucogenys]
Length = 776
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ +T TD+ K + ++TV + D NDN+P F+Q Y V +
Sbjct: 403 LVTERALDREARAEYNITLTVTDMGTPRLKTQHNITVQISDVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G+
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGQ 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 LFALRSLDYEALQAFEFRVGAADRGSPA 540
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV ++DREE Q L +TA D +++ T V ++V+D NDN+P F Q +Y+ + +
Sbjct: 194 LVLDKELDREEEPQLKLTLTALDGGSPSRSGTAQVCIEVVDINDNAPEFEQPIYKAQIPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP----SNLVVIVPQTGELLL 174
NS + S + +VSA D D K++Y L P S + + P TGE+ L
Sbjct: 254 -----NSPLG-----SLVATVSARDLDSGANGKISYTLFQPSEDISKTLEVNPMTGEIRL 303
Query: 175 TGDPPSDDV-EYELTVEAHD 193
+ + V YE+ ++A D
Sbjct: 304 SKQVDFETVTSYEVDIKATD 323
>gi|9256614|ref|NP_061760.1| protocadherin beta-3 precursor [Homo sapiens]
gi|13431377|sp|Q9Y5E6.1|PCDB3_HUMAN RecName: Full=Protocadherin beta-3; Short=PCDH-beta-3; Flags:
Precursor
gi|5457041|gb|AAD43757.1|AF152496_1 protocadherin beta 3 [Homo sapiens]
gi|14009473|gb|AAK51622.1|AF217755_1 protocadherin-beta3 [Homo sapiens]
gi|119582385|gb|EAW61981.1| protocadherin beta 3 [Homo sapiens]
gi|189066692|dbj|BAG36239.1| unnamed protein product [Homo sapiens]
Length = 796
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV+ G +DRE ++Y++ IT TD+ K + ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVSEGALDRETRSEYNITITITDLGTPRLKTKYNITVLVSDVNDNAPAFTQISYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P S+LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLSSLVSINADNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 LFALRSLDYEALQAFEFRVGATDRGSPA 540
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + SL +TA D ++ T + + VLD NDN+P F+Q +Y V +
Sbjct: 194 LVLDKALDREEQPELSLTLTALDGGSPPRSGTAQINIQVLDINDNAPEFAQPLYEVAVLE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
N+ V+ S I +VSA+D D
Sbjct: 254 -----NTPVN-----SVIVTVSASDLD 270
>gi|344236025|gb|EGV92128.1| Cadherin EGF LAG seven-pass G-type receptor 3 [Cricetulus griseus]
Length = 3109
Score = 54.3 bits (129), Expect = 7e-05, Method: Composition-based stats.
Identities = 50/153 (32%), Positives = 74/153 (48%), Gaps = 24/153 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQ 112
+ +SG L+ TSG +DRE + Y LV+ A+D G A V + VLDENDN+P FS+
Sbjct: 410 DPRSG-LISTSGRVDREHMESYELVVEASDQGQEPGPRSATVRVHITVLDENDNTPQFSE 468
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVP 167
K Y V ++ + + + + V+ATD D D V Y + ++ I
Sbjct: 469 KRY---VAQVREDV-------RPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAIDS 518
Query: 168 QTGELLLTGDPPSD---DVEYELTVEAHDLQSP 197
TGE+ + P D + EY L + A D P
Sbjct: 519 LTGEIQVVA--PLDFEAEREYVLRIRAQDAGRP 549
Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 87/322 (27%), Positives = 131/322 (40%), Gaps = 67/322 (20%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVR--YSITQGNDNHTFALKNPTTHEIRNSTESKS 59
EN +GT V + V + P + R YS+ AL N + E+ S + +S
Sbjct: 257 ENEAAGTAV----LRVVAQDPDPGEAGRLVYSLA--------ALMNSRSLELF-SIDPQS 303
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFI 118
G L+ T+ +DRE + ++ L +TA D A T V V V D ND++PVF Q YR
Sbjct: 304 G-LIRTAAALDRESMERHYLRVTAQDHGSPRLSATTMVAVTVADRNDHAPVFEQAHYR-- 360
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLA-------VPSNLVVIVPQ 168
+L NV ++ I + ATD D A Y+ + I P+
Sbjct: 361 -----ETLRENV---EEGYPILQLRATDGDAPPNANLRYRFVGSPAARSEAAAAFEIDPR 412
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDL-QSPSRYAREPAQVWLQFNSPVLQDEQLLQMID 226
+G + +G + +E YEL VEA D Q P P ++ + VL D
Sbjct: 413 SGLISTSGRVDREHMESYELVVEASDQGQEPG-----PRSATVRVHITVL---------D 458
Query: 227 RKSEAPHRIEKRRVTRA---VRPTK---RIDFSETDGEMEGRIVFALEKETEREKFKIRD 280
P EKR V + VRP R+ ++ D + G + + + R F I
Sbjct: 459 ENDNTPQFSEKRYVAQVREDVRPHTVVLRVTATDRDKDANGLVHYNIISGNSRGHFAID- 517
Query: 281 ENPWITVDENGDVRVKKRWDFE 302
G+++V DFE
Sbjct: 518 -------SLTGEIQVVAPLDFE 532
Score = 41.6 bits (96), Expect = 0.44, Method: Composition-based stats.
Identities = 50/179 (27%), Positives = 80/179 (44%), Gaps = 30/179 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS G+ V I + P+ + Y I +GN F + + SG
Sbjct: 999 ENSIVGSVVA--QITAVDPDEGPNAHIMYQIVEGNIPELFQM------------DIFSGE 1044
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS--QKVYRFIV 119
L D+D E +Y +V+ AT +++A HV + +D+NDNSPV + Q ++ V
Sbjct: 1045 LTALI-DLDYEARQEYVIVVQATSAPLVSRATVHVRL--VDQNDNSPVLNNFQILFNNYV 1101
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNL-VVIVPQT-GELLLT 175
+ + S + IG + A D D D + Y + L +++V QT GEL L+
Sbjct: 1102 SNRSDTFPSGI--------IGRIPAYDPDVSDHLFYSFERGNELQLLVVNQTSGELRLS 1152
Score = 41.6 bits (96), Expect = 0.47, Method: Composition-based stats.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 25/190 (13%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + K + LV Y+I GN FA+ +S +G + V + +D E
Sbjct: 486 LRVTATDRDKDANGLVHYNIISGNSRGHFAI------------DSLTGEIQVVA-PLDFE 532
Query: 73 EVAQYSLVITATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+Y L I A D ++ ++ V+D ND++P+F ++ V + + L +V
Sbjct: 533 AEREYVLRIRAQDAGRPPLSNNTGLASIQVVDINDHAPIFVSTPFQVSVLE-NAPLGHSV 591
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKLA--VPSNLVVIVPQTGELLLTGDPPSDDVE-YEL 187
H I +V A + ++ Y L P VI TG + ++G + VE Y
Sbjct: 592 IH------IQAVDADHGENSRLEYSLTGVAPDTPFVINSATGWVSVSGPLDRESVEHYFF 645
Query: 188 TVEAHDLQSP 197
VEA D SP
Sbjct: 646 GVEARDHGSP 655
Score = 41.2 bits (95), Expect = 0.59, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 17/135 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS 124
SG +DRE V Y + A D A VTV VLD NDN P F+ K Y
Sbjct: 632 SGPLDRESVEHYFFGVEARDHGSPPLSASASVTVTVLDVNDNRPEFTMKEYHL------- 684
Query: 125 SLNSNVSHWKKFSSIGSVSATDADGDK-VAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
LN + + +S+ SV+A D D + ++Y++ N I Q G L+T P D
Sbjct: 685 RLNEDAA---VGTSVVSVTAVDRDANSAISYQITGGNSRNRFAISTQGGVGLVTLALPLD 741
Query: 182 ---DVEYELTVEAHD 193
+ ++L + A D
Sbjct: 742 YKQERYFKLVLTASD 756
Score = 38.9 bits (89), Expect = 3.1, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 86/218 (39%), Gaps = 31/218 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L I H + V+Y+ G D PT+ +R T +DRE
Sbjct: 902 LQISATDRDAHANGRVQYTFQNGEDGDGDFTIEPTSGIVR------------TVRRLDRE 949
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
V Y L A D +G+ T V++ V D NDN+PVF + + V + NS V
Sbjct: 950 AVPVYELTAYAVD-RGVPPLRTPVSIQVTVQDVNDNAPVFPAEEFEVRVKE-----NSIV 1003
Query: 131 SHWKKFSSIGSVSATDADGDKVAYKL--AVPSNLVVIVPQ---TGELLLTGDPPSD-DVE 184
S + ++A D D A+ + V N+ + +GEL D + E
Sbjct: 1004 G-----SVVAQITAVDPDEGPNAHIMYQIVEGNIPELFQMDIFSGELTALIDLDYEARQE 1058
Query: 185 YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
Y + V+A SR V NSPVL + Q+L
Sbjct: 1059 YVIVVQATSAPLVSRATVHVRLVDQNDNSPVLNNFQIL 1096
Score = 38.1 bits (87), Expect = 5.0, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 12/95 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKV 114
++ SG + + + +D E+ Y+L ITA D KA+T +V V V D NDN+P F
Sbjct: 828 DANSGAITLQA-PLDYEDQVTYTLAITARDNGIPQKADTTYVEVMVNDVNDNAPQFVASH 886
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
Y +V + F+S+ +SATD D
Sbjct: 887 YTGLVSE----------DAPPFTSVLQISATDRDA 911
Score = 37.4 bits (85), Expect = 9.2, Method: Composition-based stats.
Identities = 49/203 (24%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ GT V + V + + + + Y IT GN + FA+ ++ GV
Sbjct: 688 EDAAVGTSV----VSVTAVDRDANSAISYQITGGNSRNRFAI------------STQGGV 731
Query: 62 LLVTSG-DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +D ++ + LV+TA+D + ++ +V +++ D N + PVF Y
Sbjct: 732 GLVTLALPLDYKQERYFKLVLTASD-RALHD-HCYVHINITDANTHRPVFQSAHYSV--- 786
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPP 179
S+N + S++ +SA+D D G+ + NL +T P
Sbjct: 787 ----SMNEDRP---VGSTVVVISASDDDVGENARITYLLEDNLPQFRIDANSGAITLQAP 839
Query: 180 ---SDDVEYELTVEAHDLQSPSR 199
D V Y L + A D P +
Sbjct: 840 LDYEDQVTYTLAITARDNGIPQK 862
>gi|189069366|dbj|BAG36398.1| unnamed protein product [Homo sapiens]
Length = 795
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 79/174 (45%), Gaps = 32/174 (18%)
Query: 37 DNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETH 95
DN F LK PT K+ LVT +DRE A+Y++ I TD+ K + +
Sbjct: 386 DNLPFILK-PTL---------KNFYTLVTERPLDRETSAEYNITIAVTDLGTPRLKTQQN 435
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KV 152
+TV V D NDN+P F+Q Y V + NS H IGSVSATD D +V
Sbjct: 436 ITVQVSDVNDNAPAFTQTSYTLFVRE----NNSPALH------IGSVSATDRDSGTNAQV 485
Query: 153 AYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
Y L P ++LV I G L + ++ +E V A D SP+
Sbjct: 486 TYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGASDRGSPA 539
Score = 40.8 bits (94), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 1 MENSKSGTGVKGLPILVASSHK-HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKS 59
+ENS+ GT P+L+A + L +Y+I+ + H RN +E K
Sbjct: 142 LENSQPGTL---FPLLIAEDLDVGSNGLQKYTISPNSHFHILT---------RNHSEGKK 189
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVY 115
LV +DREE ++SL + A D ++ T V + ++D NDN+P F Y
Sbjct: 190 YPDLVQDKPLDREEQPEFSLTLVALDGGSPPRSGTVMVRILIMDINDNAPEFVHTPY 246
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 77/177 (43%), Gaps = 31/177 (17%)
Query: 28 VRYSITQGND--NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
V Y + Q +D TF++ N T EI + +D E++ Y + I ATD
Sbjct: 276 VSYGLFQASDEIKQTFSI-NEVTGEI------------LLKKKLDFEKIKSYHVEIEATD 322
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G++ T V ++V+D NDN P I+ L SS+ N + SI V
Sbjct: 323 GGGLSGKGT-VVIEVVDVNDNPP-------ELIISSLTSSIPENAP--ETVVSIFRVRDR 372
Query: 146 DADGDKVAYKLAVPSNLVVIVPQTGE--LLLTGDPPSD---DVEYELTVEAHDLQSP 197
D+ G+ ++P NL I+ T + L + P D EY +T+ DL +P
Sbjct: 373 DS-GENGKMICSIPDNLPFILKPTLKNFYTLVTERPLDRETSAEYNITIAVTDLGTP 428
>gi|431903390|gb|ELK09342.1| Protocadherin-16 [Pteropus alecto]
Length = 2532
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+G +D E+ +Y L + A D G ++ ++TV V D NDN+P FSQ +Y+ ++
Sbjct: 1643 TGPLDFEQRDRYHLQLLAHD--GPHEGHANLTVLVEDINDNAPAFSQSLYQVML------ 1694
Query: 126 LNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDD 182
+ H S+I SVSATD D ++Y LA P+ + P G L T +
Sbjct: 1695 ----LEHTPPGSAILSVSATDRDSGANGHISYHLASPAEGFRVDPNNGTLFTTVGTVALG 1750
Query: 183 VE----YELTVEAHDLQSPSRYAREPAQVWLQ 210
E ++ +EA D P R A+ V LQ
Sbjct: 1751 HEGPGVVDVVLEARDHGIPGRAAQATVHVQLQ 1782
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 115/310 (37%), Gaps = 74/310 (23%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVIT 82
H V YSI GN F L+ P E S VL LV +D E + QY+L +
Sbjct: 1824 HATVDYSIISGNRGRVFQLE-PRLAEAGESGGLGPRVLGCLVLLEPLDFESLTQYNLTVA 1882
Query: 83 ATDVKGINKAETHV--TVDVLDENDNSPVFSQKVYRFIVGD---LKSSLNSNVSHWKKFS 137
A D +G T V TV VLD NDN PVF++ Y V + + + L +
Sbjct: 1883 AAD-RGQPPRSTAVPVTVTVLDVNDNPPVFTRTSYHVAVPEDTPVGAELLYVEASDADLG 1941
Query: 138 SIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDL 194
G VS T + GD PS L + +G L L P D +++L V+A D
Sbjct: 1942 PHGLVSFTLSSGD--------PSGLFELEESSGALRLAR--PLDCETQAQHQLVVQAADP 1991
Query: 195 QSPSRYAREPAQVWLQ------------FNSPVLQDEQ-------LLQMIDRKSEAPHRI 235
+ +A P + +Q S L + Q L ID + A R+
Sbjct: 1992 AG-AHFALAPVTIEVQDVNDYGPAFPLSLLSTSLAENQPPGTLVTTLHAIDGDAGAFGRL 2050
Query: 236 EKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRV 295
R E EGR VFAL T G++R
Sbjct: 2051 -------------RYSLLEAGPGPEGREVFALNSST-------------------GELRA 2078
Query: 296 KKRWDFEELG 305
+ +D+E G
Sbjct: 2079 RVAFDYEHTG 2088
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 20/202 (9%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V + P+ + YS+ Q +++ +P T E+
Sbjct: 533 ENQAPGTSVGR--VFATDRDTGPNGRLTYSLRQLSEDSKAFRIHPQTGEV---------- 580
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
T +DRE + Y L++ D ++ T V + VLD NDNSP F Q G
Sbjct: 581 --TTLQTLDRERQSSYQLLVQVQDAGSPPRSTTGTVHIAVLDLNDNSPTFLQ-ASGAAGG 637
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP-SNLVVIVPQTGELLLTGDP- 178
L + V +++ + + + + Y L P S L + P +GE LLT P
Sbjct: 638 GLPVQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLMGPGSELFSLHPHSGE-LLTAAPL 696
Query: 179 -PSDDVEYELTVEAHDLQSPSR 199
++ Y LT+ AHD SP R
Sbjct: 697 IRAERPHYVLTLSAHDQGSPPR 718
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 25/131 (19%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LV ++++ G+ + F L E SG L + +D E AQ+ LV+ A
Sbjct: 1942 PHGLVSFTLSSGDPSGLFEL------------EESSGALRLAR-PLDCETQAQHQLVVQA 1988
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D G + A VT++V D ND P F + L +SL N +++ ++
Sbjct: 1989 ADPAGAHFALAPVTIEVQDVNDYGPAFPLSL-------LSTSLAENQPPGTLVTTLHAI- 2040
Query: 144 ATDADGDKVAY 154
DGD A+
Sbjct: 2041 ----DGDAGAF 2047
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 95/250 (38%), Gaps = 35/250 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIVG 120
L T+ +DRE+ Y+ ++A D T VT+ V D ND++P F R +
Sbjct: 1220 LRTAIALDREQCPSYAFSVSAVDGAAAGPLSTTVSVTITVRDVNDHAPTFPTSPLRLRLP 1279
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA-VPSNLVVIVPQTGELLLTG 176
SL+ ++ ++ A D D + Y+LA P + TGE+ +
Sbjct: 1280 RPGPSLS------PPTLALATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVAR 1333
Query: 177 DP----PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
P P D V L + A DL P+R A + LQ S + R A
Sbjct: 1334 SPVAVGPQDRV---LFIVATDLGRPARSATGVVVIGLQGES---------ERGPRFPRAS 1381
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGD 292
+ R A P T G G I++++ E+ F I+ IT
Sbjct: 1382 SDVALRENAPAGTPIASPKAVHTGGS-NGPIIYSILSGNEKGTFSIQPSTGAIT------ 1434
Query: 293 VRVKKRWDFE 302
VR + DFE
Sbjct: 1435 VRSAEGLDFE 1444
>gi|426350287|ref|XP_004042711.1| PREDICTED: protocadherin alpha-13 isoform 1 [Gorilla gorilla
gorilla]
Length = 950
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 22/157 (14%)
Query: 48 THEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDN 106
T + +NS E S + LV +DREE+ ++SL++TA+D K + + +LD NDN
Sbjct: 179 TLDAQNSLEQMSSLSLVLRKTLDREEIQEHSLLLTASDGGKPELTGTVQLLITILDVNDN 238
Query: 107 SPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNL 162
+P F Q VY+ V L+++ N + + ++ATD D GD + Y P +
Sbjct: 239 APEFYQSVYKVTV--LENAFNGTL--------VIKLNATDPDDGTNGD-IVYSFRRPVSP 287
Query: 163 VVIV-----PQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ P GE+ G ++ + YE++VEA D
Sbjct: 288 AVVYAFTINPNNGEIRTKGKLDFEEKKLYEISVEAVD 324
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE V+ Y LV+TA D + A V+V V D NDN+P F+Q Y V +
Sbjct: 407 LVLDSALDRESVSAYELVVTARDGGSPSLWATASVSVGVADVNDNAPAFAQPEYTVFVKE 466
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKL 156
N H I +VSA DAD + V+Y L
Sbjct: 467 ----NNPPGCH------IFTVSAQDADAQENALVSYSL 494
>gi|66773252|ref|NP_001019353.1| protocadherin 2 gamma 9 [Danio rerio]
gi|51557482|gb|AAU06426.1| protocadherin cluster 2 gamma 9 [Danio rerio]
Length = 958
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G++DRE +++Y++ ITATD + T ++ + V D NDN PVF Q+ YR V +
Sbjct: 415 LVTTGELDRELLSEYNITITATDEGSPPLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 474
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ K SSI SVSATD D
Sbjct: 475 ----------NNKAGSSICSVSATDPD 491
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 80/156 (51%), Gaps = 27/156 (17%)
Query: 51 IRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-----VKGINKAETHVTVDVLDEND 105
+ + T+ V LV ++DRE+ + +L++TA D GI HVTV LD ND
Sbjct: 193 VNSKTDGSRYVELVLDKELDREQQKEVTLILTAVDGGTPPRSGI--VAIHVTV--LDAND 248
Query: 106 NSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSN- 161
N+PVFSQ VY+ + + NS V + + +VSATDAD +V Y+ S+
Sbjct: 249 NAPVFSQAVYKVSLPE-----NSPVD-----TVVVTVSATDADEGQNGEVTYEFGHLSDS 298
Query: 162 ---LVVIVPQTGELLLTGDPP-SDDVEYELTVEAHD 193
+ QTG++++ G D+ YE+ VEA D
Sbjct: 299 AREAFSLDHQTGQIVVKGRIDFEDESRYEIIVEAKD 334
>gi|410909484|ref|XP_003968220.1| PREDICTED: cadherin-20-like [Takifugu rubripes]
Length = 790
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN---KAETHVTVDVLDENDNSPVF 110
S ++K+GVL V+ D+DRE YS+VI A D+ G T V + + D NDN P+F
Sbjct: 203 SVDAKTGVLRVSLADMDRETRENYSVVIQAKDMGGQMGGLAGTTTVNITLTDINDNPPMF 262
Query: 111 SQKVYRFIVGDLKSSLNSNVSH-WKKFSSIG-----SVSATDADGDKVAYKLAVPSNLVV 164
Q++Y+ + + + + S V W K IG S D DG P+NL
Sbjct: 263 DQRLYQMSIPE-AAPMGSVVGRIWAKDRDIGINAEMRYSIIDGDGRDTFDVSTDPTNLFG 321
Query: 165 IVPQTGELLLTGDPPSDDVEYELTVEAHDLQ 195
I+ L P Y L VE + Q
Sbjct: 322 IITVKKPLDFETKP-----SYTLKVEGANTQ 347
>gi|194226506|ref|XP_001916261.1| PREDICTED: protocadherin Fat 1 [Equus caballus]
Length = 4588
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 118/285 (41%), Gaps = 44/285 (15%)
Query: 23 HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVIT 82
H V Y I GN F + NP + I +T +D E + Y+L+I
Sbjct: 1692 HSQSSVIYEIKDGNIADAFDI-NPHSGSI------------ITQKALDFETLPIYTLIIQ 1738
Query: 83 ATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
T++ G++ T V V + DENDNSPVF Q Y ++ + +S+NS V + + +
Sbjct: 1739 GTNMAGLS-TNTTVLVHLQDENDNSPVFMQAEYTGLISE-SASINSVVLTAENVPLV--I 1794
Query: 143 SATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQ 195
A D D + + Y + PS I TG + +L+ D + + TV+ HD+
Sbjct: 1795 RAVDGDKESNALLVYHIVEPSIHKYFAIDSSTGAIHTVLSLD-YEETSTFHFTVQVHDMG 1853
Query: 196 SPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKR------ 249
+P +A A V + +ID P + + PT +
Sbjct: 1854 TPRLFAEYAANV-------------TIHVIDINDCPPVFSKSLYEASLLLPTYKGVKVIT 1900
Query: 250 IDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVR 294
++ ++ D ++++++ + EKF + ITV +R
Sbjct: 1901 VNATDADSSAFSQLMYSITEGNIGEKFSVDYRTGTITVQNTTQLR 1945
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 90/199 (45%), Gaps = 32/199 (16%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + YSI GN++ F++ +SK+G + + +
Sbjct: 3246 GTEVLQVYAASRDIEANAEITYSIISGNEHGKFSI------------DSKTGAIFIIE-N 3292
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L + ATD ++ T V V+V D NDN+PVFSQ Y ++ + + L
Sbjct: 3293 LDYESSHEYYLTVEATDGGTPSLSDVAT-VNVNVTDINDNTPVFSQDTYTAVISE-DAVL 3350
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
S+ +V A DADG + Y + I P GE+ +T +
Sbjct: 3351 E---------QSVITVMADDADGPSNSHIHYSIIDGNQGGPFTIDPARGEVKVTKLLDRE 3401
Query: 182 DVE-YELTVEAHDLQSPSR 199
+ Y LTV+A D SP R
Sbjct: 3402 TISGYTLTVQASDNGSPPR 3420
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + +P +RY I G++ + F + + +R T+
Sbjct: 45 ENSAAKTYV-GHPVKMGIYITNPVWELRYKIVSGDNENLFKAEEYILGDFCFLRIRTKGG 103
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A T V V VLD ND P+FS Y
Sbjct: 104 NTAIL------NREVKDHYTLIVKAVEKNTNAEARTVVRVQVLDTNDLRPLFSPTSYSV- 156
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 157 ------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGAVVLT 207
Query: 176 G 176
G
Sbjct: 208 G 208
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN FA+ K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1174 LTYKITSGNPQGFFAI------------HPKTGLITTTSRKLDREQQDEHILEVTVTDNG 1221
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRF 117
K+ V V +LDENDN P F QK Y+
Sbjct: 1222 SPPKSTIARVIVKILDENDNKPQFLQKFYKI 1252
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GN F + +P E++ + +DRE ++ Y+L + A+D
Sbjct: 3370 IHYSIIDGNQGGPFTI-DPARGEVK------------VTKLLDRETISGYTLTVQASDNG 3416
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+PVFS+++Y I+
Sbjct: 3417 SPPRVNTTTVNIDVSDVNDNAPVFSKRIYSIII 3449
Score = 45.1 bits (105), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 104/250 (41%), Gaps = 36/250 (14%)
Query: 50 EIRNSTESKSGV----------LLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVT 97
EIR S SGV ++ TS +DRE + Y L + ATD +G+ + V
Sbjct: 1068 EIRYSIRDGSGVGVFKIDEETGVIETSDRLDRESTSHYWLTVYATD-QGVVPLSSFIEVY 1126
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAY 154
++V D NDN+P S+ VY V + + K S+ + A D D DK+ Y
Sbjct: 1127 IEVEDVNDNAPQTSEPVYYPEV----------MENSPKDVSVVQIQAFDPDSSSNDKLTY 1176
Query: 155 KLAV--PSNLVVIVPQTGELLLTG---DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL 209
K+ P I P+TG + T D D E+ L V D SP + A+V +
Sbjct: 1177 KITSGNPQGFFAIHPKTGLITTTSRKLDREQQD-EHILEVTVTDNGSPPK--STIARVIV 1233
Query: 210 QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVR-PTKRIDFSETDGEMEGRIVFALE 268
+ Q LQ K P R + R A R P R+ ++ D I +++E
Sbjct: 1234 KILDENDNKPQFLQKF-YKIRLPEREKPERERNARREPLYRVIATDKDEGPNAEISYSIE 1292
Query: 269 KETEREKFKI 278
E KF I
Sbjct: 1293 DGNEHGKFFI 1302
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 107/265 (40%), Gaps = 47/265 (17%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+DREE A Y+L++ ATD G + H+ + + D NDN+P FS Y V
Sbjct: 3085 LDREEQAVYNLLVKATDGGG-RFCQAHIVLTLEDVNDNAPEFSADPYTITV--------- 3134
Query: 129 NVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE- 184
+ + + + V ATDAD K++Y L ++ + + ++ P +V+
Sbjct: 3135 -FENTEPGTLLTRVQATDADAGLNRKISYSLINSADGQFSINELSGIIQLEKPLDREVQA 3193
Query: 185 -YELTVEAHDLQSPSRYAREPAQVWLQF----NSPVLQDEQLLQMIDRKSEAPHRIEKRR 239
Y LT++A D P R V N PV + + + + E +
Sbjct: 3194 VYTLTLKAVDHGLPRRLTGVGTVVVSVLDINDNPPVFEYREYGATVSE--DILIGTEVLQ 3251
Query: 240 VTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
V A R D E I +++ E KF I + I + EN D
Sbjct: 3252 VYAASR----------DIEANAEITYSIISGNEHGKFSIDSKTGAIFIIENLDY------ 3295
Query: 300 DFEELGPEKTIDFWVTINNQATNGG 324
E + ++++T+ +AT+GG
Sbjct: 3296 -------ESSHEYYLTV--EATDGG 3311
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 66/151 (43%), Gaps = 31/151 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N +S + +DRE+ Y L ITATD
Sbjct: 2954 VTYYITGGDPLGQFAIEN-----------IQSEWKVYVKKPLDREKRDNYLLTITATD-- 3000
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS--IGSVSAT 145
G ++ V V VLD NDNSP+ + +Y S+ F I VSAT
Sbjct: 3001 GTFSSKAIVEVKVLDANDNSPICEKTLY------------SDTIPEDAFPGKLILQVSAT 3048
Query: 146 DAD---GDKVAYKLAVP-SNLVVIVPQTGEL 172
DAD ++ Y L P + + P TGEL
Sbjct: 3049 DADIRSNAEITYTLFGPGAEKFKLNPDTGEL 3079
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 32/174 (18%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I+ GN++ F + + ++G+L + S +DRE +Y+L I+ +D+
Sbjct: 754 YAISGGNEDSCFII------------DMETGMLKILS-PLDRETTDKYTLNISVSDLGIP 800
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVSATDA 147
KA H+ + VLD NDN P F Q+ R+ V VS K+ +S I V ATD
Sbjct: 801 QKAAWHLLDIRVLDANDNPPEFLQE--RYFV---------EVSEDKEINSEIIQVEATDK 849
Query: 148 D---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE--YELTVEAHDLQS 196
D +V Y + ++ I TG + + DP +++ + L +EA D S
Sbjct: 850 DLGPNGRVTYSILTDTDKFSIDSMTGVVKIV-DPLDRELQHVHYLKIEARDQAS 902
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 10/90 (11%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E+ Q+ + + A D G+ ++ VTVDV D NDN P+F Q++Y ++ +
Sbjct: 2348 LDYEQFQQHKIFVRAVD-SGMPPLSSDVIVTVDVTDLNDNPPLFDQQIY-------EAKI 2399
Query: 127 NSNVSHWKKFSSIGSVSATDADGDKVAYKL 156
+ + +H + + + A +D DK+ Y +
Sbjct: 2400 SEHATHGHFVTCVKAYDADSSDIDKLEYSI 2429
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
I R++ A + L +T +D KA T V V V+ N N P F++ Y K+S +
Sbjct: 426 IKRQQAAHFELEVTTSD----RKASTRVLVKVVSANTNPPEFTETAY-------KASFDE 474
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT 188
NV S+ +V + + V Y +A +++ ++ + T S++++YEL
Sbjct: 475 NVPVGTTVMSVSAVDPDEGENGYVTYSIANLNHVPFVINHFTGAVST----SENLDYELM 530
Query: 189 VEAHDLQ 195
+ L+
Sbjct: 531 PRVYTLR 537
>gi|156368057|ref|XP_001627513.1| predicted protein [Nematostella vectensis]
gi|156214425|gb|EDO35413.1| predicted protein [Nematostella vectensis]
Length = 1781
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 16/155 (10%)
Query: 48 THEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVT-VDVLDENDN 106
+H + + ++ SG + T+G DRE YS+ +TA+D +K+ T V V V D NDN
Sbjct: 58 SHGNKFAIDASSG-RIYTTGTFDRETKDDYSINVTASDHGNPSKSSTCVVLVTVADNNDN 116
Query: 107 SPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLV 163
SP F Y F + + +SIG+VSA+DAD ++ Y + P
Sbjct: 117 SPKFPALHYVFDIAE----------DAAVGASIGTVSASDADIGENARLTYSIVSPEKAT 166
Query: 164 VIV-PQTGELLLTGDPPSDDVEYELTVEAHDLQSP 197
+ P TGE+ + + Y + V A DL +P
Sbjct: 167 FSMNPVTGEITVGQRLDREGANYSIRVTATDLGTP 201
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 29/202 (14%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ GT + L + S + +RY+ GN N++F + N T +R
Sbjct: 234 ENASPGTEIITLQAVDGDSGVNAE--IRYAFVTGNSNNSFTI-NSITGRLR--------- 281
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAE--THVTVDVLDENDNSPVFSQKVYRFIV 119
T+ ++DRE +++L + A D+ G+ + + T+VTV + D NDN PVF+ Y V
Sbjct: 282 ---TARNLDRETTPRFTLEVLAYDL-GVPRKDSVTNVTVVLRDVNDNQPVFTMSEYAAEV 337
Query: 120 --GDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGD 177
G ++S++ + V+ + S GSV+ G + L VI TG + +T
Sbjct: 338 SEGVVESNIVTVVAEDRDIGSDGSVTYCITQGRE--------GGLFVINENTGTIGITAK 389
Query: 178 PPSD-DVEYELTVEAHDLQSPS 198
+ +Y L V+A D SP+
Sbjct: 390 LDRETKSKYTLRVQATDGGSPA 411
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 18/87 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y ITQG + F + T G + +T+ +DRE ++Y+L + ATD
Sbjct: 362 VTYCITQGREGGLFVINENT------------GTIGITA-KLDRETKSKYTLRVQATD-- 406
Query: 88 GINKA---ETHVTVDVLDENDNSPVFS 111
G + A E V V+VLD+ND++PVF+
Sbjct: 407 GGSPALSSEADVIVNVLDQNDHAPVFT 433
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 91/228 (39%), Gaps = 52/228 (22%)
Query: 91 KAETHVTVDVLDENDNSPVFSQKVY-RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
KA+ + ++VLD ND++PVF + VY F V D S + SIG V A
Sbjct: 509 KADAAIQIEVLDTNDHAPVFIKSVYLLFAVQDAGSGV-----------SIGRVEAV---- 553
Query: 150 DKVAYKLAVPSNLV-------------VIVPQTGELLLTGDPPSDDVE--YELTVEAHDL 194
DK Y P+ LV + P+TGE+L+ DDV Y + V A D+
Sbjct: 554 DKFDYG---PNALVRYEAISGNGTGRFRVAPETGEVLIASS-LRDDVNKTYYIRVRASDM 609
Query: 195 QSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSE 254
P + A V+++ L + + + SE I V T R DF
Sbjct: 610 GQPKM--SDTAGVYVEVTERNLHPPVFSKAVYQTSEN-EDIAVGSALLTVTATDR-DFGR 665
Query: 255 TDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
G I + + +E F I +T NG + V K D+E
Sbjct: 666 -----NGEISYDIIAGNSQEYFGI-----GLT---NGSLYVSKPLDYE 700
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 18/84 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY I+ GN + F + + T +R T+ ++DRE +A+Y L +TATD
Sbjct: 990 IRYGISAGNTGNAFVM-DAVTGFVR------------TAAELDREAIAEYRLTVTATDNG 1036
Query: 88 G---INKAETHVTVDVLDENDNSP 108
A VT+D D NDN P
Sbjct: 1037 TPPMTGNATLVVTLD--DINDNPP 1058
>gi|90085375|dbj|BAE91428.1| unnamed protein product [Macaca fascicularis]
Length = 545
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 81/180 (45%), Gaps = 32/180 (17%)
Query: 31 SITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN 90
+I DN F LK PT K+ LVT +DRE A+Y++ IT TD+
Sbjct: 155 TICSIPDNLPFVLK-PTL---------KNFYTLVTERPLDRETRAEYNITITVTDLGTPR 204
Query: 91 -KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
K + +TV V D NDN+P F+Q Y V + NS H IGSVSATD D
Sbjct: 205 LKTQQSITVQVSDVNDNAPAFTQTSYTLFVRE----NNSPALH------IGSVSATDRDS 254
Query: 150 D---KVAYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
+V Y L P ++LV I G L + ++ +E V A D SP+
Sbjct: 255 GTNAQVTYLLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQGFEFRVGAADRGSPA 314
>gi|351705185|gb|EHB08104.1| Protocadherin Fat 4, partial [Heterocephalus glaber]
Length = 3672
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 64/124 (51%), Gaps = 23/124 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+ +DRE ++YS+ IT TD+ K + ++TV V D NDN+P F+Q Y V +
Sbjct: 3082 LVTNTALDRETRSEYSITITVTDLGTPRLKTQHNITVQVSDVNDNAPTFTQTSYTLWVPE 3141
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP---------SNLVVIVPQT 169
NS H IG++SATD D +V Y L +P ++LV I T
Sbjct: 3142 ----NNSPALH------IGTISATDRDSGTNAQVTYSLLLPPPRDPHPGLASLVSINADT 3191
Query: 170 GELL 173
G+L
Sbjct: 3192 GQLF 3195
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 23/124 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L T +DRE ++YS+ IT TD+ K + ++TV V D NDN+P F+Q Y V +
Sbjct: 3516 LETESPLDRETRSEYSITITVTDLGTPRLKTQHNITVQVSDVNDNAPTFTQTSYTLWVPE 3575
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP---------SNLVVIVPQT 169
NS H IG++SATD D +V Y L +P ++LV I T
Sbjct: 3576 ----NNSPALH------IGTISATDRDSGTNAQVTYSLLLPPPRDPHPGLASLVSINADT 3625
Query: 170 GELL 173
G+L
Sbjct: 3626 GQLF 3629
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 14/153 (9%)
Query: 48 THEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDN 106
T + +NS E S + LV +DREE+ ++SL++T TD K + + +LD NDN
Sbjct: 1123 TLDTQNSREQMSLLSLVLRKTLDREEIQEHSLLLTVTDGGKPELTGTVQLLIRILDVNDN 1182
Query: 107 SPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIV 166
+P F Q VY+ V L+++LN + K ++ T+AD + Y P + V+
Sbjct: 1183 APEFDQFVYKVRV--LENALNGTL--VIKLNATDPDDGTNAD---IVYSFRRPISPAVVY 1235
Query: 167 -----PQTGELLLTGDPPSDDVE-YELTVEAHD 193
P++GE+ + ++ + YE++VEA D
Sbjct: 1236 AFNINPESGEIRIKDKLDFEENKFYEISVEAVD 1268
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 112/263 (42%), Gaps = 52/263 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV S +DRE V++Y +V+T D +A V+V+V D NDN+PVF+Q Y V +
Sbjct: 808 LVLSSALDRESVSEYKVVVTVQDGGSPPLRATATVSVEVADVNDNAPVFAQPEYTVFVKE 867
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLA-------VPSNLVVIVPQTGE 171
+N+ S I +V A DAD + V+Y L S+ V + ++G+
Sbjct: 868 ------NNLPG----SHIFTVCARDADAQENALVSYSLVERRVGERALSSYVSVHAESGK 917
Query: 172 LLLTGDPPSDDVEYELT---VEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQ----L 221
+ P D E EL V A D P+ + QV++ N+P+L +
Sbjct: 918 VFALQ--PLDREELELLQFQVSARDSGVPALGSNVTLQVFVLDENDNAPLLLGPPTGGIV 975
Query: 222 LQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDE 281
+++ R H + K R A D + F L+ +
Sbjct: 976 SELLSRSVGVGHVVAKVRAVDA------------DSGYNAWLSFELQDSASGVR------ 1017
Query: 282 NPWITVDENGDVRVKKRWDFEEL 304
+P++ + +NG + V R D EEL
Sbjct: 1018 SPFLNL-QNGILFVNSRIDREEL 1039
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 72/140 (51%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE ++ +L ITA D K+ T H+ V VLD ND+ P FS+ VYR V +
Sbjct: 2438 LVLDKPLDREEQSEVNLTITAVDGGSPPKSGTAHIRVVVLDVNDHVPQFSRLVYRAQVPE 2497
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVV----IVPQTGELLL 174
+S N S + V+ATD D ++ Y L+ ++ I QTGE+ L
Sbjct: 2498 --NSANG--------SFVVMVTATDLDEGTNKEIIYSLSQNPETILQTFQIDSQTGEVRL 2547
Query: 175 TGDPPSDDVE-YELTVEAHD 193
G + +E Y++ ++A D
Sbjct: 2548 RGPLDFESIETYDIDIQATD 2567
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV ++DRE V+ Y +V+TA D + A V+V+V D NDN+PVF+Q Y V +
Sbjct: 375 LVLDSNLDRESVSNYEVVVTAKDGGSPSLWATATVSVEVADVNDNAPVFAQPEYTVFVKE 434
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKL 156
+ S I +V A DAD + V+Y L
Sbjct: 435 ----------NNPPGSHIFTVCARDADAQENALVSYSL 462
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Query: 36 NDNHTFALKNPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA 92
N T+ L +P+ H +++ E+ + LV +DRE+ A + LV+TA D +
Sbjct: 1867 NSVQTYEL-SPSEHFELDLKPLQENSKVLELVLRKGLDREQAALHHLVLTAVDGGSPAHS 1925
Query: 93 ET-HVTVDVLDENDNSPVFSQKVYR 116
T ++V VLD NDNSP F Q YR
Sbjct: 1926 GTAQISVRVLDTNDNSPAFDQSTYR 1950
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVT--VDVLDENDNSPVFSQKVYRFIV 119
LV SG +DRE+VA Y++ +TATD GI + + T V + D NDN P F + Y +
Sbjct: 2108 LVVSGPLDREQVAAYNITVTATD-GGIPQLTSQRTLQVKISDINDNPPSFLKDSYSIYI 2165
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 116/279 (41%), Gaps = 45/279 (16%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVY 115
++G+L V S IDREE+ S + +++ HV V+V D NDNSPVFS K
Sbjct: 49 QNGILFVNS-RIDREELCGRSAECSIHLEVIVDRPLQVFHVEVEVKDINDNSPVFSLKEQ 107
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVP----QTGE 171
R ++ + K +F G+ A + + Y+L+ + P T
Sbjct: 108 RLLISESKQP-------DSRFPLEGAFDADIEENAVLTYRLSQNEYFSLESPVSSRPTKR 160
Query: 172 LLLTGDPPSD---DVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRK 228
L L P D + E+++ + A D P R Q+++Q D + Q+
Sbjct: 161 LSLILKKPLDREKNAEHKMILTASDGGKPERTGT--IQLFVQVLDVNDNDPEFDQL---- 214
Query: 229 SEAPHRIEKRRVTRAVRPTKRIDFSETDGE--MEGRIVFALEKETEREKFKIRDENPWIT 286
+ R V A + I + TD + + G + ++L+ + P+ T
Sbjct: 215 -----EYKVRLVENAAKEILVIKLNATDRDEGLNGEVTYSLKSIKPSGR-------PFFT 262
Query: 287 VD-ENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
+D NG+VRV D+EE + + I QAT+ G
Sbjct: 263 LDGNNGEVRVNGTLDYEE-------NKFYEIEVQATDKG 294
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 14/101 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE+V+ Y++ + A D N AET + V + D NDN PVF + Y V +
Sbjct: 2649 LVTDRSLDREDVSGYNITLVAMDTAPPNLSAETVIEVLISDINDNPPVFQEGSYILTVRE 2708
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVP 159
N++ + + IG V A D D +V Y L P
Sbjct: 2709 -----NNSPAIF-----IGKVHAEDLDLGENAQVTYSLLPP 2739
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 52/114 (45%), Gaps = 14/114 (12%)
Query: 52 RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVF 110
RN +E K LV +DREE A+YSL + A D ++ V + ++D NDN+P F
Sbjct: 3296 RNHSEGKKFPDLVQDKPLDREEQAEYSLSLMALDGGSPPRSGSVMVQILIMDVNDNAPEF 3355
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSN 161
Y V + LN S I VSA D D V+Y L PS+
Sbjct: 3356 VHTPYEVQVLE-NCPLN---------SPILGVSARDMDAGNFGSVSYGLFQPSD 3399
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 41 FALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVD 99
F+L P HE + LV +DREE + L++TATD K + +
Sbjct: 579 FSLDIPPNHE------QVKPLGLVLRKPLDREEAPEIYLLLTATDGGKPELTGTVQLLIT 632
Query: 100 VLDENDNSPVFSQKVY 115
VLD NDN+PVF + +Y
Sbjct: 633 VLDANDNAPVFDRTLY 648
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 76/165 (46%), Gaps = 24/165 (14%)
Query: 24 PHQLVRYSITQGNDNHTFALKN----PTTHEIRNSTESKSGVL--LVTSGDIDREEVAQY 77
P LV + D+ + +L+N P + +S G+L LV +DREE +
Sbjct: 2828 PGYLVTKVVAVDGDSGSNSLQNYTISPNFYFHLKLQDSPQGLLPQLVLDKALDREEQPEI 2887
Query: 78 SLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKF 136
L +TA D ++ T V ++VLD NDN+P F+Q +Y V + N V
Sbjct: 2888 RLTLTALDGGTPPRSGTALVVIEVLDINDNAPEFTQLLYEVQVPE-----NCPVG----- 2937
Query: 137 SSIGSVSATDAD---GDKVAYKLAVPSNLV----VIVPQTGELLL 174
S + +VSA D D +++Y + S + I +GELLL
Sbjct: 2938 SQVATVSARDLDIGTYGQISYAFSQASEDIRKTFQINANSGELLL 2982
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 63 LVTSGDIDREEVAQYSLVITATD-----VKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
L+ G +DRE++++Y +++TA+D + V V++LD NDNSP F + Y+
Sbjct: 1783 LLNDGPLDREQMSEYQVLVTASDRASPPLSTQRTLTIAVEVEILDINDNSPRFPRPDYQL 1842
Query: 118 IVGD 121
V +
Sbjct: 1843 QVSE 1846
>gi|332234718|ref|XP_003266552.1| PREDICTED: protocadherin beta-3 [Nomascus leucogenys]
Length = 796
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV+ G +DRE ++Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVSEGALDRETRSEYNITITVTDLGTPRLKTEYNITVLVSDVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSV ATD D +V Y L P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVRATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 LFALRSLDYEALQAFEFRVGATDRGSPA 540
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + SL +TA D ++ T + + VLD NDN+P F+Q +Y V +
Sbjct: 194 LVLDKALDREEQPELSLTLTALDGGAPPRSGTAQINIQVLDINDNAPEFAQPLYEAAVLE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
N+ V+ S I +VSA+D D
Sbjct: 254 -----NTPVN-----SVIVTVSASDLD 270
>gi|348572810|ref|XP_003472185.1| PREDICTED: cadherin-3-like [Cavia porcellus]
Length = 902
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 325 VVAYSI------HSQEPKDP--HDLMFTIHRSTGSISVVSSGLDREKVPEYTLTIQATDM 376
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+P+F + Y
Sbjct: 377 DGNGSTTTAVAIVEILDANDNAPMFDPQKY 406
>gi|194390076|dbj|BAG60554.1| unnamed protein product [Homo sapiens]
Length = 645
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 81/179 (45%), Gaps = 32/179 (17%)
Query: 32 ITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN- 90
I DN F LK PT K+ LV+ +DRE A+Y++ IT TD+
Sbjct: 229 ICSIQDNLPFFLK-PTF---------KNFFTLVSEKALDRESQAEYNITITVTDLGTPRL 278
Query: 91 KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD 150
K E ++TV + D NDN+P F+Q Y V + NS H IGSVSATD D
Sbjct: 279 KTEYNITVLLSDVNDNAPTFTQTSYTLFVRE----NNSPALH------IGSVSATDRDSG 328
Query: 151 ---KVAYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPS 198
+V Y L P ++LV I G L + + E+E V A D SP+
Sbjct: 329 TNAQVNYSLLPPQDRHLPLASLVSINADNGHLFALRSLDYEALQEFEFRVGATDRGSPA 387
Score = 37.7 bits (86), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 45 NPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDV 100
+P +H +I +S++ K LV +D E+ A+ L +TA D K+ T V + V
Sbjct: 20 SPNSHFYIKIPDSSDRKIYPELVLDRALDYEQEAELRLTLTAVDGGSPPKSGTTLVLIKV 79
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
LD NDN+P F Q +Y V + + + W I ++SA D D K++Y
Sbjct: 80 LDINDNAPEFPQSLYEVQVPE-----DRPLGSW-----IATISAKDLDAGNYGKISYTF 128
>gi|345324502|ref|XP_003430824.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 3-like
[Ornithorhynchus anatinus]
Length = 4517
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 57/117 (48%), Gaps = 15/117 (12%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
MENS V + I ++ + Y IT GN + FA+ K+G
Sbjct: 1154 MENSPKDVSV--IQIQAQDPDSGSNEKLTYRITSGNPQNFFAMN------------FKTG 1199
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYR 116
V+ TS +DRE+ A++ L +T TD K T V V VLDENDN P F +KVY+
Sbjct: 1200 VITTTSRKLDREQQAEHFLEVTVTDGGSSPKQSTVWVVVQVLDENDNKPQFPEKVYQ 1256
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 127/308 (41%), Gaps = 65/308 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YS+ G+ N+ F L +P + E++ T +DRE++ Y+L++ ATD
Sbjct: 3060 ISYSL-YGSGNNKFFL-DPESGELK------------TLALLDREKIPVYNLIVRATDGG 3105
Query: 88 G-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
G ++E H+ ++ D NDN PVFS Y V + ++ + + V ATD
Sbjct: 3106 GRFCQSEVHLILE--DVNDNPPVFSSDHYSACVYENTATK----------ALLTRVQATD 3153
Query: 147 AD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE--YELTVEAHDLQSPSRYA 201
D KV Y LA +N + ++ +++ P +V+ Y ++V+A D QS +
Sbjct: 3154 PDVGVNRKVVYSLADSANGYFSIDRSSGIIILEQPLDREVQSSYNISVKASD-QSVALAL 3212
Query: 202 REPAQVWLQF-----NSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETD 256
A V + N PV + L + P AV T + D
Sbjct: 3213 SSFATVTITVLDINDNPPVFERRDYLVTV------PEDTSPGTQVLAVFATSK------D 3260
Query: 257 GEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEELGPEKTIDFWVTI 316
I + + ER KF+I I+V EEL E DF++ +
Sbjct: 3261 IGTNAEITYLIRSGNERGKFRINSRTGEISV-------------IEELDYELCKDFYLVV 3307
Query: 317 NNQATNGG 324
+A +GG
Sbjct: 3308 --EAADGG 3313
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 24/152 (15%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V IL+++ + + Y + GN + F + NP + I N
Sbjct: 1678 ENVDVGTSV----ILISAISQ---STLMYEVKDGNVDGAFVI-NPYSGVITNQRA----- 1724
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+D E A Y L++ AT++ G+ T V + V+DENDN+PVF Y G
Sbjct: 1725 -------LDYERTASYQLIVQATNMAGMASNAT-VNIQVVDENDNAPVFLFSQYS---GS 1773
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDKVA 153
L + N +S + ATDAD ++ A
Sbjct: 1774 LSEAAPVNSVVRSSANSPLVIRATDADSNQNA 1805
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 61/123 (49%), Gaps = 16/123 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E S GT V L ++ + + ++LV+Y I Q N T +S SG+
Sbjct: 2294 EASLIGTPV--LQVVASDADSESNRLVQYQIVQDTFNSTDYFH----------IDSSSGL 2341
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+L T+ +D E V + +L + ATD G +E VT+ V D NDN PVF+Q +Y V
Sbjct: 2342 IL-TARLLDHESVQRSTLKVRATD-SGFPPLSSEVLVTIFVTDTNDNPPVFNQLIYESYV 2399
Query: 120 GDL 122
+L
Sbjct: 2400 SEL 2402
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 77/170 (45%), Gaps = 21/170 (12%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT-DVKGINKAET 94
N+ ++L NP + +S SGV+ T DREE Y LV+ A+ ++ + A
Sbjct: 2008 NEPLKYSLLNPGN---KFKIKSTSGVIQTTGIPFDREEQEVYELVVEASRELDRLRVARV 2064
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD----ADGD 150
V V V D NDN+PVF Y V + +SI V+A D A+GD
Sbjct: 2065 IVRVTVEDINDNTPVFVGLPYYAAVQ----------VDAEPGTSIYRVTAIDRDKGANGD 2114
Query: 151 KVAYKLAVPSNLVVIVPQTGELLLTGDPPSD--DVEYELTVEAHDLQSPS 198
V Y L I P +G++ L SD ++EY + V A D SPS
Sbjct: 2115 -VTYLLREGYGHFEIDPSSGDVTLREAFDSDLSNIEYSVVVLARDGGSPS 2163
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 69/150 (46%), Gaps = 29/150 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT GN FAL ++N + + +DREE YSL ITATD
Sbjct: 2956 VSYHITGGNPRGKFALG-----LVQNEWK------VYVKRPLDREEQDVYSLNITATDGL 3004
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ +A VTV D NDNSPV Q Y ++ + + SN I +SA D
Sbjct: 3005 FVTQAVVEVTVS--DVNDNSPVCDQVAYTALIPE---DIPSN-------KLILKISAKDP 3052
Query: 148 D----GDKVAYKL-AVPSNLVVIVPQTGEL 172
D GD ++Y L +N + P++GEL
Sbjct: 3053 DVGSNGD-ISYSLYGSGNNKFFLDPESGEL 3081
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 53 NSTESKSGV-LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS 111
+S +++ GV +V + +D E+ + Y++ + TD G N A T V + VLD NDN P FS
Sbjct: 1400 SSFDTEKGVGTIVIAKPLDAEQRSIYNMTVEVTD--GTNVAVTQVFIKVLDNNDNGPEFS 1457
Query: 112 QKVY 115
Y
Sbjct: 1458 HPSY 1461
>gi|348514337|ref|XP_003444697.1| PREDICTED: protocadherin-10-like [Oreochromis niloticus]
Length = 608
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 89/176 (50%), Gaps = 27/176 (15%)
Query: 36 NDNHTFALKNPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA 92
N HT+ L P H ++R S E K LV +DRE+ +SLV+TA D ++
Sbjct: 158 NSIHTYTL-TPNDHFEIDVRQSDEDKIP-FLVLKKSLDREQKCNHSLVVTAVDGGKPPRS 215
Query: 93 ET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD- 150
T +VTV VLD NDN P+F++++Y S+ NV K I ++ATD D +
Sbjct: 216 GTLNVTVIVLDSNDNRPMFTKEIYEI-------SVPENVLVGTK---IFKINATDTDENL 265
Query: 151 --KVAYKLAVP-----SNLVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSP 197
+ Y+L ++ + +GE+++ G D +DV Y+L +EA D +P
Sbjct: 266 NGAIEYRLGKTLKKKVYDIFELDKLSGEIIVKGLIDYEENDV-YKLDIEASDKGTP 320
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIVG 120
LVT G +DRE+V+ Y + + ATD G T +++ + D NDN P FSQ
Sbjct: 400 LVTKGLLDREKVSYYEITMKATDC-GEPPLSTFKTLSIQISDVNDNIPQFSQN------- 451
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
L+ L+ N K I SV+ATD D
Sbjct: 452 PLQVYLSENNVAGK---PIFSVTATDKD 476
>gi|297295292|ref|XP_001089886.2| PREDICTED: protocadherin beta-7-like isoform 1 [Macaca mulatta]
Length = 795
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 70/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE +Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTEKPLDRERNTEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P S+LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGSNAQVTYSLLPPQDPHLPLSSLVSINADNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 LFALRSLDYEALQAFEFRVGAADRGSPA 540
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 74/140 (52%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LV + +DREE+ ++SL +TA D ++ T V + VLD NDN+P F Q +Y+ V +
Sbjct: 194 LVLNQVLDREEIPEFSLTLTALDGGSPPRSGTALVRILVLDINDNAPDFLQSLYQVQVPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVV----IVPQTGELLL 174
NS V S + SVSA D D ++AY + + +++ I P +G L L
Sbjct: 254 -----NSPVG-----SIVVSVSARDLDTGSNGEIAYAFSYATEIILKTFQINPTSGSLHL 303
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+ + ++ Y LT++A D
Sbjct: 304 KAELDYEAIQTYTLTIQAKD 323
>gi|395504920|ref|XP_003756794.1| PREDICTED: protocadherin Fat 2 [Sarcophilus harrisii]
Length = 4252
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 25/205 (12%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G P+L+ S+ V Y + +GN + F++ S SG L+ T +D
Sbjct: 1572 GSPLLLVSAVSTSE--VTYEMREGNKDGVFSIN------------SYSG-LISTQKSLDH 1616
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E+V+ Y L I +++ G A+ V V ++DENDN+PVF + VG + + +
Sbjct: 1617 EKVSSYQLKIRGSNMAGA-FADVMVLVYIIDENDNTPVFINSSF---VGYISEAAPIHSM 1672
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EY 185
+++ V ATDAD D + Y++ L I P G L + + + +
Sbjct: 1673 ILDEYNHPLVVRATDADTDTNALLVYEILEREALKFFKIDPSMGTLTTVMEMDYEHISSF 1732
Query: 186 ELTVEAHDLQSPSRYAREPAQVWLQ 210
LT+ HD +P +A +PA+V +
Sbjct: 1733 SLTIHVHDQGNPILFASKPARVTIH 1757
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 73/161 (45%), Gaps = 28/161 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESKSGVLLVTSGDIDREEVAQYSLV 80
P +VRY I G+ + F + +R T+S + +L +RE Y+LV
Sbjct: 64 PQMVVRYRIVSGDLANVFKTEEHVVGSFCFLRIRTKSGNTAIL------NREVCDSYTLV 117
Query: 81 ITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD---LKSSLNSNVSHWKKFS 137
I AT+ +A T V V +LD+ND P+FS Y+ + + LK S
Sbjct: 118 IQATEQTLGYEASTQVLVHILDQNDLKPLFSPPSYKVAIPEDTPLK-------------S 164
Query: 138 SIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLT 175
+I VSATDAD + A Y S L + P +G + +T
Sbjct: 165 AICMVSATDADLGQNADFYYAFNARSELFTVHPTSGVVTVT 205
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 25/191 (13%)
Query: 10 VKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDI 69
++G+PI +H L + + G + + E R E ++G+L V + +
Sbjct: 721 LEGVPINTTVAH-----LAAFDLDAGFNGKLVYVLAGGNEESRFDVELETGLLKV-AAPL 774
Query: 70 DREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
D E + Y L +T D+ K+ + V+V DENDN+P F Y+ + + + + +
Sbjct: 775 DHEATSFYILNVTVYDLGTPQKSSWKQLAVNVGDENDNTPKFPAGGYQVEIRE-DTEMGT 833
Query: 129 NVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---D 182
++ K A DAD D +V Y L P++ + TGE+++TG P D
Sbjct: 834 TIAQLK---------AEDADKDDNGRVCYTLLNPTDQFSLHALTGEVVVTG--PLDRESQ 882
Query: 183 VEYELTVEAHD 193
+Y L +EA D
Sbjct: 883 PQYVLKIEARD 893
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 91/199 (45%), Gaps = 31/199 (15%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+EN G V L L A + Q+ Y IT+G+ F + T E + ST+
Sbjct: 2813 IENGDPGEHVVTLRTLDADISEQNRQVTCY-ITEGDPLGQFDISQ-TADEWKISTKKI-- 2868
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+DRE +A+Y L +TA+D G +A V V VLD NDNSP +Q +Y V
Sbjct: 2869 --------LDREHIAKYLLKVTASD--GKFQASIPVEVFVLDINDNSPQCTQILYSSKVP 2918
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-SNLVVIVPQTGEL--LL 174
+ + H+ I V+ATD D +V Y L P ++ + P TGEL L+
Sbjct: 2919 E-----DMLPGHF-----ILQVTATDLDAGVNAQVTYSLHGPGADEFKLDPYTGELTTLM 2968
Query: 175 TGDPPSDDVEYELTVEAHD 193
+ DV Y L +A D
Sbjct: 2969 PLNREEKDV-YHLVAKATD 2986
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
+ + K+GVL VT G +D E ++ + ATD + +E V V V D NDN P+F+Q
Sbjct: 2113 TADFKTGVLTVT-GPLDYESQTKHIFTVRATDTALGSFSEATVEVQVEDINDNPPIFTQL 2171
Query: 114 VYRFIVGD 121
VY +V +
Sbjct: 2172 VYTALVSE 2179
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 83/192 (43%), Gaps = 38/192 (19%)
Query: 46 PTTHEIRNSTESKSGV-------LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTV 98
P+ I ST SG L+ T+ +D + A+Y L + T + + T V +
Sbjct: 390 PSLQYILKSTSESSGFKINSRTGLITTTRLMDYHDRARYQLHVGTT----LGQTSTIVVI 445
Query: 99 DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYK 155
D++D N+++PVFSQ Y G +L +S+ +V+ATD D + V Y
Sbjct: 446 DIIDCNNHAPVFSQSSYH---GTFDENLPPG-------TSVLTVTATDQDHGENGFVTYS 495
Query: 156 LAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT-------VEAHDLQSPSRYAREPAQVW 208
+ P IVP T + L S ++YEL V A D SP R E +
Sbjct: 496 ITSPR----IVPFTIDPYLGVISTSKLMDYELMQRLYTFRVWATDWGSPFRRESE-VSIS 550
Query: 209 LQFNSPVLQDEQ 220
L N+ L D Q
Sbjct: 551 LMLNN--LNDNQ 560
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT--DVK 87
Y I GN+ F L + +G+L V +G +D E +Y L I
Sbjct: 3150 YQIVSGNEQEKFRL------------DYHTGILYV-NGSLDFETGQEYYLSIECIRKSSP 3196
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+N T V V++ D ND+ P F Q +Y V + ++ V SI +VSATD
Sbjct: 3197 SLNDG-TIVVVNITDVNDHPPKFLQDLYSVEVKE-----DAAVGE-----SILTVSATDG 3245
Query: 148 DG---DKVAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPSRY 200
DG + Y L L I P+ GEL + ++ Y LT+ A D P+ Y
Sbjct: 3246 DGPLNSAITYSLVAGDRLGHFTIHPKKGELQIAKHLDWEETSSYFLTLRATDSGQPALY 3304
>gi|391335873|ref|XP_003742311.1| PREDICTED: cadherin-23-like [Metaseiulus occidentalis]
Length = 1904
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 137/331 (41%), Gaps = 55/331 (16%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEI-RNSTES-- 57
MEN+ SGT V L + +P + YS+ G + KN + N T++
Sbjct: 819 MENTPSGTEVGQL--VATDPDDNPD--LSYSLCSGEEALASEAKNEEGTVVPFNGTDTFR 874
Query: 58 ---KSGVLLVTSGDIDREEVAQYSLVITATDVKGINK---AETHVTVDVLDENDNSPVFS 111
KSG + + +DRE V + + D G+ K ++ + V V D NDN+PVF
Sbjct: 875 VDLKSGKIFLRQS-LDRETVETIKMCVQVIDEAGVTKDQLSQAILNVKVGDVNDNAPVFR 933
Query: 112 QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK-VAYKLAVPSNLVVIVP--- 167
+ YR V + NS + S + + A D D ++ + Y L PS+L+ ++
Sbjct: 934 KPFYREAVTE-----NSKIG-----SPVVTARAMDVDRNRTITYSLEGPSDLLRLISIDR 983
Query: 168 QTGELLLTGDPPSDDVEYE------LTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQL 221
+TGE+L+ SD ++ E +T++A D P P + VL +
Sbjct: 984 KTGEVLV-----SDKIDRETTSWINVTLKATDSGFP------PLTGMTSLSIQVLDENDN 1032
Query: 222 LQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDE 281
+ S H E + V ++ ++ D GRI +AL+ KFKI +
Sbjct: 1033 NPVFAEGSTEFHISEDSPIATVV---AQLTATDADAGEHGRITYALDPSGTHGKFKIDKD 1089
Query: 282 NPWITVDENGD-------VRVKKRWDFEELG 305
ITV D + + WD E G
Sbjct: 1090 TGVITVAAGLDREEISQFTLIVQAWDNYEAG 1120
Score = 42.0 bits (97), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 31/138 (22%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD---- 85
Y I GND++ F+L + TH+ LVT+ +DREE + Y+L++ A+D
Sbjct: 1410 YYIVGGNDDNRFSL-DIFTHQ------------LVTTEVLDREEKSHYTLIVQASDDCFH 1456
Query: 86 -------VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS 138
+ + V + VLD NDN P F +V+ + + + F
Sbjct: 1457 QPKSVLNFDSKDNSLLQVDIKVLDVNDNPPRFVSRVF-------TGGVTTEANFGTTFMK 1509
Query: 139 IGSVSATDADGDKVAYKL 156
+ +V + KV Y +
Sbjct: 1510 VQAVDIDQGENSKVTYYI 1527
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 30/189 (15%)
Query: 40 TFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD--VKGINKAET--- 94
T+AL TH + + +GV+ V +G +DREE++Q++L++ A D G+ ++
Sbjct: 1072 TYALDPSGTHG-KFKIDKDTGVITVAAG-LDREEISQFTLIVQAWDNYEAGVGTDQSRRS 1129
Query: 95 --HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHW-KKFSSIGSVSATDAD--- 148
+T+ + D ND PVF ++ S ++VS + ++ ++SATD D
Sbjct: 1130 FKQITIHLSDVNDEKPVFVRQ---------PSGECASVSEFLNPGETVLTISATDKDEPG 1180
Query: 149 --GDKVAYKLAV--PSNLVVIVPQTGE---LLLTGDPPSDDV-EYELTVEAHDLQSPSRY 200
++ + + + P N + V + L T P V Y LT+ A D P +
Sbjct: 1181 SLNSRLVFSMDIDQPENDIFEVETLADNQARLFTKVPIRGKVGNYSLTLRARDQGFPIQN 1240
Query: 201 AREPAQVWL 209
A E V +
Sbjct: 1241 AMEKFNVCV 1249
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 58/139 (41%), Gaps = 25/139 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ VRY + N T N +T EI+ + GDI L + A
Sbjct: 618 PNSAVRYVLMDHTRNFTI---NQSTGEIKPKNTINFEAIPQPKGDI-----RVIVLTVMA 669
Query: 84 TDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
D G T+ TV V D NDN+P+F Q YR + + ++ SSI
Sbjct: 670 VDA-GQPPLSTNTTVKVFVQDANDNAPIFKQNFYRQAIPE----------DIREGSSIIR 718
Query: 142 VSATDADG----DKVAYKL 156
V ATDAD K+AY++
Sbjct: 719 VEATDADDSPAFSKIAYRI 737
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 59/124 (47%), Gaps = 10/124 (8%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVR-YSITQG----NDNHTFALKNPTTHEI-RNS 54
+N+ V GL LV + + P L + + +G D TF P E+ R
Sbjct: 20 FKNNLPKFAVGGLSELVVTVKEGPESLGKPLYLLRGEDADGDTLTFGALGPDGKELLRFE 79
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQ 112
+SK+ + + ++DRE Y++V+T TD K + H T+ ++ D NDN PVF
Sbjct: 80 RKSKTEAEVFLNKELDRELRDSYTIVLTLTDGKLGDGQFIHQTLVIIVEDINDNEPVF-- 137
Query: 113 KVYR 116
K Y+
Sbjct: 138 KAYK 141
>gi|351696801|gb|EHA99719.1| Protocadherin Fat 1 [Heterocephalus glaber]
Length = 4589
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 119/282 (42%), Gaps = 44/282 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I GN F + NP + I +T +D E + Y+L I T++
Sbjct: 1698 VIYEIKDGNIGDVFDI-NPHSGSI------------ITQKALDFETLPIYTLTIQGTNMA 1744
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G++ T V V + DENDN PVF Q Y ++ + +S+NS V + + + ATDA
Sbjct: 1745 GLS-TNTTVLVHLQDENDNIPVFIQAEYSGLISE-SASINSVVLTDRNVPLV--IRATDA 1800
Query: 148 DGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQSPSRY 200
D + + Y + PS I TG + +L+ D V + TV+ HD+ +P +
Sbjct: 1801 DKESNALLVYHIVEPSVHKYFAIDSTTGAIHTVLSLDYEETSV-FHFTVQVHDMGTPRLF 1859
Query: 201 AREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKR------IDFSE 254
A A V + +ID P + + PT R ++ ++
Sbjct: 1860 AEYAANV-------------TIHVIDINDCPPVFSKSLYEALLLLPTYRGVKIITVNATD 1906
Query: 255 TDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
D ++++++ + EKF + + IT+ +R +
Sbjct: 1907 ADSSAFSQLIYSITEGNIGEKFFMDYKTGTITIQNTTQLRSR 1948
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + +P +RY I G++ + F + + +R T+
Sbjct: 46 ENSAAKTYV-GHPVKMGIYITNPLWELRYKIVSGDNENLFKAEEYILGDFCFLRIRTKGG 104
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE QY+L++ A + +A T V V VLD ND P+FS Y
Sbjct: 105 NTAIL------NREVKDQYTLIVKAVEKNTNAEARTRVRVQVLDINDLRPLFSPTSYSV- 157
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 158 ------SLPENTPIR---TSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGAVVLT 208
Query: 176 G 176
G
Sbjct: 209 G 209
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 50/208 (24%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + YSI GN++ F++ +SK+G + + +
Sbjct: 3247 GTEVLQVYAASRDIEANAEITYSIINGNEHGKFSI------------DSKTGAIFIIE-N 3293
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L + ATD ++ T ++V D NDN+P FSQ Y ++ + + L
Sbjct: 3294 LDYESAHEYYLTVEATDGGTPSLSDVAT-ANINVTDINDNTPSFSQDTYMAVISE-DAVL 3351
Query: 127 NSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVV--------------IVPQTGEL 172
S+ +V A DADG PSN ++ I P GE+
Sbjct: 3352 E---------QSVITVLADDADG---------PSNSLIHYSIIEGNQGSPFTIDPVKGEV 3393
Query: 173 LLTGDPPSDDVE-YELTVEAHDLQSPSR 199
+T + + Y LT++A D SP R
Sbjct: 3394 KVTKLLDRETISGYTLTIQASDNGSPPR 3421
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ L+ YSI +GN F + +P E++ + +DRE ++ Y+L I A+
Sbjct: 3368 NSLIHYSIIEGNQGSPFTI-DPVKGEVK------------VTKLLDRETISGYTLTIQAS 3414
Query: 85 DVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
D + T V +DV D NDN+PVFS+ Y I+
Sbjct: 3415 DNGSPPRVNTTTVNIDVSDVNDNAPVFSKGNYSVII 3450
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1175 LMYKITSGNPQGFFSI------------HPKTGLITTTSRRLDREQQDEHILEVTVTDNG 1222
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYR 116
K+ V V +LDENDN P F QK Y+
Sbjct: 1223 TPPKSTIARVIVKILDENDNKPQFLQKFYK 1252
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 68/151 (45%), Gaps = 31/151 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N I+N + + +DRE+ Y L ITATD
Sbjct: 2955 VTYFITGGDTLGQFAVEN-----IQNEWK------VYVKKPLDREKKDSYLLTITATD-- 3001
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD--LKSSLNSNVSHWKKFSSIGSVSAT 145
G ++ V V VLD NDNSPV + +Y + + L L I VSAT
Sbjct: 3002 GTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPEDALPGKL------------IVQVSAT 3049
Query: 146 DAD---GDKVAYKL-AVPSNLVVIVPQTGEL 172
DAD ++ Y L + + P TGEL
Sbjct: 3050 DADIRSNAEITYTLFGSGAEKFKVNPDTGEL 3080
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E+ Q+ + + A D G+ ++ VTVDV D NDN P+F Q++Y ++ +
Sbjct: 2349 LDYEQFQQHKIFVRAID-GGMPPLSSDVIVTVDVTDLNDNPPLFDQQIY-------EAKI 2400
Query: 127 NSNVSHWKKFSSIGSVSATDADGDKVAYKL 156
+ + +H + + A +D D++ Y +
Sbjct: 2401 SEHATHGHFVMCVKAYDADSSDIDRLEYSI 2430
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 56/127 (44%), Gaps = 15/127 (11%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
I R++ + + +T +D KA T V V VL N N P F+Q Y K+S +
Sbjct: 427 IRRQQASHFEFEVTTSD----QKASTKVLVKVLSANSNPPEFTQTAY-------KASFDE 475
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT 188
N S + +V D + V Y +A + + ++ + T S++++YEL
Sbjct: 476 NASIGTTVLRVSAVDPDDGENGYVTYSIANINPVPFVIDHFTGAVST----SENLDYELM 531
Query: 189 VEAHDLQ 195
+ L+
Sbjct: 532 PRVYTLR 538
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 65/145 (44%), Gaps = 27/145 (18%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
YSI+ GN++ F + + +G+L + S +DRE +Y+L IT D+
Sbjct: 755 YSISGGNEDSCFII------------DMDTGMLKILS-PLDRETTDKYTLNITVYDLGIP 801
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
KA + + +LD NDN P F Q+ Y F+ + +NS + V ATD D
Sbjct: 802 QKAAWRLLDIIILDANDNPPEFLQESY-FVEVNEDKEINSEIIQ---------VEATDKD 851
Query: 149 ---GDKVAYKLAVPSNLVVIVPQTG 170
V Y + ++ +I TG
Sbjct: 852 LGSNGHVTYSILTDTDKFLIDSTTG 876
>gi|327270405|ref|XP_003219980.1| PREDICTED: protocadherin gamma-B5-like [Anolis carolinensis]
Length = 1545
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+ +DRE Y L++ ATD + + ++V D NDN+P+F Q Y
Sbjct: 890 LLLEKALDRETQPIYDLILIATDGGDPVRSGTLQIHINVFDANDNAPIFGQSAY------ 943
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVP------SNLVVIVPQTGELLL 174
++S+N N+ W ++I V ATD D G K + S + ++ TGE+LL
Sbjct: 944 -EASVNENIPKW---TTIAVVRATDLDEGINAEIKYSFQKITKKISQIFLLNSTTGEILL 999
Query: 175 TGDPPSDDVE-YELTVEAHD 193
G+ ++ YE V+A D
Sbjct: 1000 IGNLDYEESSLYEFEVQATD 1019
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 92/198 (46%), Gaps = 34/198 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +DREE+++Y++ ITATD +G T +++++ D NDN+P F + Y
Sbjct: 1100 LVTERPLDREEISEYNITITATD-RGTPPLSTQKTISLEISDINDNAPAFEKSSYSIFTP 1158
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL------AVP-SNLVVIVPQTG 170
+ + +++ ++ A+D D K+ Y + +P S+ + I +TG
Sbjct: 1159 E----------NNPAGTALFTIKASDPDVGLNAKITYSIFNSNIQELPISSYISINTETG 1208
Query: 171 ELLLTGDPPSDDV-EYELTVEAHDLQSPSRYAREPAQVW----------LQFNSPVLQDE 219
+ ++ E++L V+A D SP + +V+ + + SP +
Sbjct: 1209 TIYAQRSFDYEEFREFQLQVKAQDGGSPPLSSNATIRVFILDRNDNTPQILYPSPENKGS 1268
Query: 220 QLLQMIDRKSEAPHRIEK 237
L +M+ R +E + I K
Sbjct: 1269 TLFEMVPRSAEEDYLITK 1286
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVY 115
L+T G +DRE +Y++ ITATD KG T+ T+ ++ D NDN P F + Y
Sbjct: 319 LLTDGQLDRESAPEYNITITATD-KGTPPLSTYKTISIMISDINDNPPAFEKSSY 372
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+ +DRE+ ++LV+ A D K T ++ V+V D NDN+PVFSQ +Y
Sbjct: 197 LILHKQLDREKEHTHNLVLIAMDGGVPRKTGTLNIRVNVTDINDNAPVFSQAMY------ 250
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
K SL NV S+ V A+D+D
Sbjct: 251 -KVSLKENVPIGM---SVLQVKASDSD 273
>gi|296485262|tpg|DAA27377.1| TPA: protocadherin beta 2 [Bos taurus]
Length = 773
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 77/157 (49%), Gaps = 20/157 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+ +DRE ++Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 395 LVTNAALDREARSKYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLWVRE 454
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD-KVAYK-------LAVPSNLVVIVPQTGELL 173
NS H IGSVSATD D + +V Y L ++LV I P G L
Sbjct: 455 ----SNSPALH------IGSVSATDTDANAQVTYSLLPPPDPLVXLASLVSINPDNGHLF 504
Query: 174 -LTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL 209
LT +E V A D SP+ ++ +V +
Sbjct: 505 ALTSLDYEALRAFEFHVGATDRGSPALSSQALVRVLV 541
>gi|345800954|ref|XP_853709.2| PREDICTED: cadherin-3 [Canis lupus familiaris]
Length = 833
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE V +Y+L I ATD+
Sbjct: 256 VVAYSI------HSQEPKDP--HDLMFTVHRSTGTISVISSGLDRERVPEYTLTIQATDM 307
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+P+F + Y
Sbjct: 308 DGDGSTTTAVAIVEILDANDNAPMFDPQKY 337
Score = 38.1 bits (87), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DRE++A+Y L A G + + ++++ V D+ND+ P F+Q
Sbjct: 163 TIEKETGWLLLNK-PLDREKIAKYELYGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQ 221
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
V+R V L+ L +S+ V+ATD D
Sbjct: 222 DVFRGSV--LEGVLPG--------TSVMQVTATDED 247
>gi|431892560|gb|ELK02993.1| Protocadherin beta-4 [Pteropus alecto]
Length = 735
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 61/122 (50%), Gaps = 21/122 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE ++Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 402 LVTESPLDRETRSEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGS+SATD D +V Y L P ++LV I G+
Sbjct: 462 ----NNSPALH------IGSISATDRDAGANAQVTYSLLPPQDPQLPLASLVSINADNGQ 511
Query: 172 LL 173
L
Sbjct: 512 LF 513
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 77/178 (43%), Gaps = 33/178 (18%)
Query: 28 VRYSITQGND--NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
V Y Q +D TF+L N T EIR + + +D E++ Y + I ATD
Sbjct: 276 VSYGFFQASDEIKQTFSL-NEVTGEIRLTKK------------LDFEQIKSYHVEIEATD 322
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G++ T V ++V+D NDN+P + SSL S +S + +
Sbjct: 323 GGGLSGKGT-VVIEVVDVNDNAPELTM-----------SSLTSFISENAPETVVAIFRIR 370
Query: 146 DAD-GDKVAYKLAVPSNLVVIVPQTGE---LLLTGDPPSDDV--EYELTVEAHDLQSP 197
D D GD ++P L I+ T + L+T P + EY +T+ DL +P
Sbjct: 371 DRDSGDNGKMICSIPDYLPFILKPTFKNFYTLVTESPLDRETRSEYNITITVTDLGTP 428
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 20/124 (16%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L +Y+I+ + H RN +E K LV +DREE +++SL + A D
Sbjct: 166 LQKYTISPNSHFHILT---------RNHSEGKKYPDLVQDKVLDREEQSEFSLTLMALDG 216
Query: 87 KGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
++ T + + ++D NDN+P F Q Y V + NS + S + SV A
Sbjct: 217 GSPPRSGTITLQILIMDVNDNAPEFVQTPYEVQVLE-----NSPID-----SPVLSVLAR 266
Query: 146 DADG 149
DAD
Sbjct: 267 DADA 270
>gi|355691686|gb|EHH26871.1| hypothetical protein EGK_16947 [Macaca mulatta]
Length = 697
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ +T TD+ K E ++TV + D NDN+P F+Q Y V +
Sbjct: 345 LVTERALDREARAEYNITLTVTDMGTPRLKTEHNITVQISDVNDNAPAFTQTFYTLFVRE 404
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
NS H IGSVSATD+D
Sbjct: 405 ----NNSPALH------IGSVSATDSD 421
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 14/102 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV ++DREE Q L +TA D ++ T V ++V+D NDN+P F Q +Y+ + +
Sbjct: 136 LVLDKELDREEEPQLRLTLTALDGGSPPRSGTAQVHIEVVDINDNAPEFEQPIYKVRIPE 195
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPS 160
SSL S V+ +VSA D D K++Y L PS
Sbjct: 196 -NSSLGSLVA---------TVSARDLDSGANGKISYSLFQPS 227
>gi|327274092|ref|XP_003221812.1| PREDICTED: protocadherin Fat 4-like [Anolis carolinensis]
Length = 4863
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 88/195 (45%), Gaps = 38/195 (19%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+ YS+ +GN+ F + N T V L+ G +D E A YSL I A D
Sbjct: 1288 LIHYSVIKGNEEKQFTIDNSTGQ-----------VTLI--GKLDHEATASYSLTIQAVDS 1334
Query: 87 KGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVSA 144
++ + + ++VLDENDNSP F KS+L +V + + SV+A
Sbjct: 1335 GAVSLSSVCTLNIEVLDENDNSPSFP-----------KSTLFVDVLENMRIGELVSSVTA 1383
Query: 145 TDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQ 195
TD+D GD + Y + +N I P TG + L + D E Y+L + A D
Sbjct: 1384 TDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLA---KALDFETQSMYKLNITAKDKG 1440
Query: 196 SPSRYAREPAQVWLQ 210
P + + ++++
Sbjct: 1441 RPPQSSTMSVVIYVR 1455
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 31/189 (16%)
Query: 11 KGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDID 70
K + + A P+ + Y I GN +++F++ EIR+ +D
Sbjct: 2730 KIITVTAADKDSGPNGQLNYEIISGNVDNSFSIHR-ANGEIRSVRP------------LD 2776
Query: 71 REEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
RE VAQY L I A+D +G + A V ++VLDENDN+P FSQ ++ +V + N+
Sbjct: 2777 RENVAQYMLTIKASD-RGTPVQSASVQVLINVLDENDNAPKFSQ-IFSALVPE-----NA 2829
Query: 129 NVSHWKKFSSIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE- 184
+ + ++ V+ +D D A Y L + VI P TG++ ++ +D +
Sbjct: 2830 PLGY-----TVTRVTTSDEDIGVNAVSRYSLKETNTPFVINPNTGDITISRLLNREDADR 2884
Query: 185 YELTVEAHD 193
Y + V AHD
Sbjct: 2885 YRIRVSAHD 2893
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 29/190 (15%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
LV+Y+I+ GN++ FA+ + +G L + +D E ++ + I+A D
Sbjct: 3167 LVKYNISSGNEDGNFAIN------------ASTGALSLAK-PLDYEVCQKHEMSISAIDG 3213
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + +TV+V+D NDNSPVFS + Y S + + +++ +SAT
Sbjct: 3214 GWVARTGYCSITVNVIDVNDNSPVFSPEDY----------FPSVLENAPSGTTVIHLSAT 3263
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRY 200
DAD +AY + + S+L VI P TG + G + + Y LT++A ++ R
Sbjct: 3264 DADSGSNAVIAYAVQSSDSDLFVIDPNTGIITTQGFLDYETKQSYHLTIKAFNVPDEERC 3323
Query: 201 AREPAQVWLQ 210
+ + L+
Sbjct: 3324 SFANVNIHLK 3333
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 15/93 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
VRY+I+ G D F + N ++GV+ + +DREE Y L I A D
Sbjct: 768 VRYTISAG-DTSRFQIHN------------QTGVI-TSKTVLDREEKTAYQLQIGAYDGG 813
Query: 88 GI-NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+ ++ + VTV+VLD DN PVFSQ Y F+V
Sbjct: 814 NLQSQNQAIVTVNVLDTQDNPPVFSQDTYSFVV 846
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 70/176 (39%), Gaps = 29/176 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ F + T L+ T+ IDREE A Y L + A+
Sbjct: 870 ITYLITMGDQRGMFEINKVTG-------------LITTASVIDREEQAFYQLKVVAS--G 914
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G + V + V D NDNSP F V V V +W +I A D
Sbjct: 915 GAIAGDALVNITVKDLNDNSPHFLHAVESVDV----------VENWSTGHTIFQAKAVDP 964
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSR 199
D V Y L P +L + Q+G + LTG + Y++ + A DL P R
Sbjct: 965 DEGINGIVLYSLKQNPKDLFSVNEQSGAISLTGPLDINAGSYQVEIMASDLGVPRR 1020
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 39/54 (72%), Gaps = 3/54 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYRF 117
+G++DRE V+ Y+L I ATD KG + T+V V VLD NDN+PVF+QK+Y+
Sbjct: 2153 TGELDRETVSNYTLTIIATD-KGQPSLSSSTNVVVVVLDINDNNPVFAQKLYKI 2205
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 82/199 (41%), Gaps = 39/199 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSG----VLLVTSGDIDREEVAQYSLVITATD 85
Y I GN+ F L N T + SG + LV+ G +DRE Y L++ D
Sbjct: 164 YRIVGGNEGGRFRL---------NITLNPSGEGAFLHLVSRGGLDREATPAYQLLLQVED 214
Query: 86 VKG--INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
KG + V V V D NDN PVFSQ +Y+ V + ++ V +S+ V+
Sbjct: 215 -KGEPRKRGYLQVNVTVQDINDNPPVFSQTLYQARVPE-----DAPVG-----ASVLQVT 263
Query: 144 ATDAD-GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDV------------EYELTVE 190
A DAD G + + V G L DP S + +Y LTV+
Sbjct: 264 AADADEGTNADIRYRLEGAESAGVDGAGALPFEVDPESGVIRIREALDYELRRQYSLTVQ 323
Query: 191 AHDLQSPSRYAREPAQVWL 209
A D P+ R A + L
Sbjct: 324 AIDRGVPALSGRAEALIRL 342
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 23/171 (13%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y++++ + + TF L NP T GV +T +D E Y L I A D
Sbjct: 1920 ITYTVSEDDGDGTFFL-NPVT-----------GVFNLTCM-LDYEMQQYYILTIRAEDGG 1966
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G V +++LD NDN+P+FS Y +SL N+S A D
Sbjct: 1967 G-QSITVRVYINILDVNDNAPIFSMDSY-------STSLMENLSPGSTIFLFNVTDADDG 2018
Query: 148 DGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE--YELTVEAHDLQS 196
+++Y + +L +L P + + Y L V+ HD+ S
Sbjct: 2019 SNSQLSYSITSGDSLSQFNIDKNGILSIRQPLDRESQSFYSLIVQVHDMAS 2069
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y+I G D +F + + +SG L+ T
Sbjct: 1798 GDGSKIMQLTAMDADEGANALVTYTIISGADG-SFHI------------DPESGELIATK 1844
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND+ P FS+ Y F
Sbjct: 1845 -RLDRERRSKYSLLVRADD--GLQSSDMRINITVSDVNDHIPKFSKLWYSF 1892
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 64/154 (41%), Gaps = 39/154 (25%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ +GT V +LV SS S++ GN T NP+T +I
Sbjct: 2419 EDAPTGTDV----LLVNSSDADASVNAIISLSGGNSQFTI---NPSTGQI---------- 2461
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+TS +DRE Y+L+I A D N + T V V + D NDN P F Y
Sbjct: 2462 --ITSALLDRETKENYTLIIVARDGGFPNALSSSTSVLVTIADVNDNPPKFQHHPY---- 2515
Query: 120 GDLKSSLNSNVSHWKKFSSIG----SVSATDADG 149
V+H +S G +V+ TDAD
Sbjct: 2516 ----------VTHIPSPTSSGTFVFAVTVTDADA 2539
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVF 110
L T +DREE YSL + ATD+ + V V +LD NDNSP+F
Sbjct: 685 LSTISQLDREEQGHYSLQVLATDLGYPTLSSVVQVNVSLLDVNDNSPLF 733
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 106/279 (37%), Gaps = 63/279 (22%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
RYS+ + N T + NP T +I S ++RE+ +Y + ++A D
Sbjct: 2852 RYSLKETN---TPFVINPNTGDI------------TISRLLNREDADRYRIRVSAHDSGW 2896
Query: 89 INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
T VT+ V D NDNSP F++ Y +L + S + +SATD D
Sbjct: 2897 --TVSTDVTIFVTDINDNSPRFTKPSYYLDCPELN----------EIGSKVTQISATDPD 2944
Query: 149 ---GDKVAYKLAVPSNLVVIVPQTGELL---------LTGDPPSDDVEYELTVEAHDLQS 196
+V Y + S I TGE+ +G ++ + V + D S
Sbjct: 2945 EGSNGQVFYFIKSQSEFFRINASTGEIFNKQSLKFQNSSGSGNANLNRHSFIVTSSDRGS 3004
Query: 197 PSRYAREPAQVWLQFNSPVLQDEQL-LQMIDRKSEAPHRIEKRRVTRAVR----PTKRID 251
P P++ + + + ++D APH + + T A + TK I
Sbjct: 3005 P----------------PLMSETTVTINIVDSNDNAPHFLASQYFTPATKNVAVGTKLIK 3048
Query: 252 FSETDGE---MEGRIVFALEKETEREKFKIRDENPWITV 287
+ D + + + + L KF + WI+V
Sbjct: 3049 VTAVDTKDFGLNSEVEYLLLNNDLMSKFNLDHNTGWISV 3087
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 35/176 (19%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKVY 115
SG + VT G +DRE+ + SL + A + ++G + E V + VLD ND PVF+ +VY
Sbjct: 3396 SGQIYVT-GPLDREKEERISLKVLAKNAGSIRGADIDEVAVNITVLDAND-PPVFNLEVY 3453
Query: 116 RFIVGD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLVV 164
+ + S+ +S+ + W +FS IG+ + A
Sbjct: 3454 NVQISEGVPVGTHVTFVSAFDSDSLPSWNRFSYFIGNGNHNGA---------------FS 3498
Query: 165 IVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
I PQTG++ +T + + + Y L V A D +PS + L+ N P+L
Sbjct: 3499 INPQTGQVTVTAELDRETLPVYNLCVLAIDSGAPSATGSASLLITLEDINDNGPIL 3554
>gi|194384704|dbj|BAG59512.1| unnamed protein product [Homo sapiens]
Length = 774
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 9/90 (10%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 197 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 248
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVY 115
G T V V++LD NDN+P+F + Y
Sbjct: 249 DGDGSTTTAVAVVEILDANDNAPMFDPQKY 278
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
+ E ++G LL+ +DREE+A+Y L A G + + ++++ V D+ND+ P F+Q
Sbjct: 104 AVEKETGWLLLNKP-LDREEIAKYELFGHAVSENGASVEDPMNISIIVTDQNDHKPKFTQ 162
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAV 158
+R V L+ L +S+ V+ATD D Y V
Sbjct: 163 DTFRGSV--LEGVLPG--------TSVMQVTATDEDDAIYTYNGVV 198
>gi|340725229|ref|XP_003400975.1| PREDICTED: protocadherin Fat 3-like [Bombus terrestris]
Length = 1961
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 79/178 (44%), Gaps = 30/178 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI GND FA+ + KSGV+ V +DRE++ +Y L+I A D
Sbjct: 636 VSYSIVSGNDLRQFAIGD------------KSGVITVIR-KLDREDLTRYQLLIKAEDSG 682
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G+ T V + V D ND +P F Y F V + +K IG V A DA
Sbjct: 683 GLFNTAT-VNIKVTDINDKNPEFVDLPYEFTVKE---------GEARKL--IGRVHAEDA 730
Query: 148 D-GDKVAYKLAVPSNLVVIV-PQTGELL--LTGDPPSDDVEYELTVEAHDLQSPSRYA 201
D G P ++ V P+TG++L + D +D EY+ V A D R A
Sbjct: 731 DEGINAEITYFAPDDIPFTVDPETGDVLTKIVLDYEQND-EYKFVVTARDGAPDYRLA 787
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 15/122 (12%)
Query: 76 QYSLVITATDVKGINKAETHVTVDVL-DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWK 134
Q+S+ + ATD KG ++T V V+V+ N SPVF Q VY V + +S+NS V+
Sbjct: 570 QFSITVQATD-KGGKYSQTIVEVNVIPGPNTRSPVFQQPVYEVQVSE-GASINSTVA--- 624
Query: 135 KFSSIGSVSATDADGDKVAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EYELTVEA 191
+++A D + D V+Y + ++L I ++G + + +D+ Y+L ++A
Sbjct: 625 ------TITAVDPENDPVSYSIVSGNDLRQFAIGDKSGVITVIRKLDREDLTRYQLLIKA 678
Query: 192 HD 193
D
Sbjct: 679 ED 680
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 23/128 (17%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
I V +SH H ++ I GN+ F N TE ++ L + G +D E
Sbjct: 1052 ITVINSHAHDTTPLKCEIYSGNEKQLFE---------ANVTEERNCALKLRKGVLDYETT 1102
Query: 75 AQYSLVITATDVKGI---NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
Y + + + G+ ++ T V + VLD NDN P FI D ++ L S
Sbjct: 1103 ESYQVKLKLESLSGLLNTDRNTTMVKIQVLDVNDNKP-------EFIFADSRAKL----S 1151
Query: 132 HWKKFSSI 139
+ F++I
Sbjct: 1152 RGRYFAAI 1159
>gi|383865554|ref|XP_003708238.1| PREDICTED: cadherin-87A-like, partial [Megachile rotundata]
Length = 1434
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 80/178 (44%), Gaps = 30/178 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI GND FA+ + KSG++ V +DRE++ +Y L+I A D
Sbjct: 590 VSYSIISGNDLRQFAIGD------------KSGIITVIR-KLDREDLTRYQLLIKAEDSG 636
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G++ T V + V D ND +P F Y F V + +K IG V A DA
Sbjct: 637 GLSSTAT-VNIKVTDINDKNPEFVDLPYEFTVKE---------GEARKL--IGRVHAEDA 684
Query: 148 D-GDKVAYKLAVPSNLVVIV-PQTGELL--LTGDPPSDDVEYELTVEAHDLQSPSRYA 201
D G P ++ V P+TG++L + D +D EY+ V A D R A
Sbjct: 685 DEGINAEITYFAPDDIPFTVDPETGDVLTKIVLDYEQND-EYKFVVTARDGAPDYRLA 741
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 12/99 (12%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
I V +SH H ++ I GN++ F N TE ++ L + G +D E
Sbjct: 993 ITVINSHAHDTTPLKCEIYSGNEDDLFE---------ANVTEERNCALRLKKGALDFETT 1043
Query: 75 AQYSLVITATDVKGI---NKAETHVTVDVLDENDNSPVF 110
Y + I + G+ + T V + VLD NDN P F
Sbjct: 1044 ESYQVKIKLESLSGLLNSGRNTTMVKIQVLDVNDNKPEF 1082
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 15/122 (12%)
Query: 76 QYSLVITATDVKGINKAETHVTVDVL-DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWK 134
Q+S+ + ATD KG ++T V V+V+ N SPVF Q VY V + +S+NS V+
Sbjct: 524 QFSITVQATD-KGGKYSQTIVEVNVIPGPNTRSPVFQQPVYEVQVSE-GASINSTVA--- 578
Query: 135 KFSSIGSVSATDADGDKVAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EYELTVEA 191
+++A D + D V+Y + ++L I ++G + + +D+ Y+L ++A
Sbjct: 579 ------TITAIDPENDPVSYSIISGNDLRQFAIGDKSGIITVIRKLDREDLTRYQLLIKA 632
Query: 192 HD 193
D
Sbjct: 633 ED 634
>gi|380805915|gb|AFE74833.1| cadherin-3 preproprotein, partial [Macaca mulatta]
Length = 94
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 9/91 (9%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI H+ K+P H++ + +G + V S +DRE+V +Y+L I ATD+
Sbjct: 11 VVAYSI------HSQEPKDP--HDLMFTIHRSTGTISVISSGLDREKVPEYTLTIQATDM 62
Query: 87 KGINKAETHVT-VDVLDENDNSPVFSQKVYR 116
G T V V++LD NDN+PVF + Y
Sbjct: 63 DGDGSTTTAVAVVEILDANDNAPVFDPQKYE 93
>gi|350588390|ref|XP_003357289.2| PREDICTED: protocadherin Fat 3 [Sus scrofa]
Length = 4301
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 58/117 (49%), Gaps = 15/117 (12%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
MENS V + I ++ + Y IT GN + FA+ SK+G
Sbjct: 1157 MENSPKDVSV--IQIQAEDPDSSSNEKLTYRITSGNPQNFFAIN------------SKTG 1202
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYR 116
++ TS +DRE+ A++ L +T TD K T V V VLDENDN P F +KVY+
Sbjct: 1203 LITTTSRKLDREQQAEHFLEVTVTDGGFSPKQSTIWVVVQVLDENDNKPQFPEKVYQ 1259
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 112/279 (40%), Gaps = 42/279 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYS+ G+ N+ F L +P + E++ T +DRE + Y+LV ATD
Sbjct: 3063 IRYSL-YGSGNNEFFL-DPESGELK------------TLARLDRERIPVYNLVARATDGG 3108
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G ++ + + + D NDN PVFS Y V + N + + + ++
Sbjct: 3109 G-RFCQSDIRLILEDVNDNPPVFSSDHYNACVYE-------NTATKALLTRVQAMDPDVG 3160
Query: 148 DGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE--YELTVEAHDLQSPSRYAREPA 205
KV Y LA +N + + +++ P + + Y ++V A D QSP + A
Sbjct: 3161 INRKVVYSLADSANGFFSIDGSSGIVILEQPLDREQQSAYNISVRATD-QSPGQALSSLA 3219
Query: 206 QVWLQF-----NSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEME 260
V + N PV + L + P AV T + D
Sbjct: 3220 TVTITVLDINDNPPVFERRDYLVTV------PEDTSPGTQVLAVFATSK------DIGTN 3267
Query: 261 GRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
I + + E+ KF+I + I+V E D + K++
Sbjct: 3268 AEITYLIRSGNEQGKFRIHPKTGGISVSEILDYELCKKF 3306
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 82/189 (43%), Gaps = 27/189 (14%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y + GN + F + NP SGV+ T +D E + Y L++ AT++ G+
Sbjct: 1702 YEVKDGNVDGIFTI-NP-----------YSGVI-TTRKALDYEHTSSYQLIVQATNMAGM 1748
Query: 90 NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS--LNSNVSHWKKFSSIGSVSATDA 147
T V + ++DENDN+PVF Y G L + +NS V + + ATDA
Sbjct: 1749 ASNVT-VNIQIVDENDNAPVFLFSQYS---GSLSEAAPINSIVRSLDNSPLV--IRATDA 1802
Query: 148 DGDK---VAYKL--AVPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPSRYA 201
D ++ + Y++ + + TG + + + + + V D SP A
Sbjct: 1803 DSNRNALLVYQIVESTAKKFFTVDSSTGAIRTIANLDHETIAHFHFHVHVRDSGSPQLTA 1862
Query: 202 REPAQVWLQ 210
P +V ++
Sbjct: 1863 ESPVEVNIE 1871
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 16/107 (14%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
++ + P+ +R+SI G+ + FA+ +P ++ + DRE V
Sbjct: 3362 LIAEDADSQPNGQIRFSIVNGDRDSEFAV-DPVLGLLKVKKKL------------DRERV 3408
Query: 75 AQYSLVITATDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIV 119
+ YSL++ A D GI + TV D+ D NDNSPVF+ Y ++
Sbjct: 3409 SGYSLLVQAVD-SGIPAMSSTATVNIDISDVNDNSPVFTPANYTAVI 3454
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 66/150 (44%), Gaps = 29/150 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT GN FAL +S+ V + +DREE Y L ITATD
Sbjct: 2959 VSYHITGGNPRGRFAL---------GLVQSEWKVYV--KRPLDREEQDMYFLNITATD-- 3005
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G+ + V V V D NDNSPV Q Y + + SN I VSA DA
Sbjct: 3006 GLFVTQAMVEVTVSDVNDNSPVCDQVAYTAV---FPEDIPSN-------KIILKVSAKDA 3055
Query: 148 D----GDKVAYKL-AVPSNLVVIVPQTGEL 172
D GD + Y L +N + P++GEL
Sbjct: 3056 DIGSNGD-IRYSLYGSGNNEFFLDPESGEL 3084
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 53 NSTESKSGV-LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS 111
+S +++ GV +V + +D E+ + Y++ + TD G N A T V + VLD NDN P FS
Sbjct: 1403 SSFDAEKGVGTIVIAKPLDAEQRSIYNMSVEVTD--GTNVAVTQVFIKVLDNNDNGPEFS 1460
Query: 112 QKVY 115
Q Y
Sbjct: 1461 QPNY 1464
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 70/160 (43%), Gaps = 29/160 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E S GT V L ++ + +++V Y I Q N T +S SG+
Sbjct: 2297 EASLIGTPV--LQVVSTDADSENNKMVHYQIVQDTYNSTDYFH----------IDSASGL 2344
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIV 119
+L T+ +D E V +L + ATD G + V V + D NDN PVF+Q +Y V
Sbjct: 2345 IL-TARMLDHELVQHCTLKVRATD-SGFPSLSSEVLVHIYISDVNDNPPVFNQLIYESYV 2402
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
+L H+ + V A+DAD D++ Y +
Sbjct: 2403 SELAPR-----GHF-----VTCVQASDADSSDFDRLEYSI 2432
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVY 115
+GVL V S +D E ++ Y L + A+D + A VTVD+L D NDN P+F Q Y
Sbjct: 2236 TGVLKVVS-PLDYEIISVYKLTVRASD--ALTGARAEVTVDLLVNDINDNPPIFDQPTY 2291
Score = 38.1 bits (87), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 15/164 (9%)
Query: 43 LKNPTTHEIRN-----STESKSGVLLVTSGDIDREEVAQYSLVITAT-DVKGINKAETHV 96
L P + I N +S SGV+ T DREE Y LV+ A+ ++ + A V
Sbjct: 2010 LNEPLKYSILNPGNKFKIKSTSGVIQTTGVPFDREEQELYELVVEASRELDHLRVARVVV 2069
Query: 97 TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKL 156
V++ D NDNSPVF Y +++ + + + ++ +V Y L
Sbjct: 2070 RVNIEDINDNSPVFVGLPYY-------AAVQVDAEPGTQIYRVTAIDKDKGANGEVTYVL 2122
Query: 157 AVPSNLVVIVPQTGELLLTGDPPSD--DVEYELTVEAHDLQSPS 198
I P +G ++L SD ++EY +T+ A D PS
Sbjct: 2123 QDDYGHFEINPTSGNVILKEAFNSDLSNIEYGVTILAKDGGKPS 2166
>gi|296192993|ref|XP_002744345.1| PREDICTED: protocadherin beta-13 isoform 1 [Callithrix jacchus]
Length = 798
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+T +DRE +Y++ IT TD+ K + ++TV V D NDN+P F+Q Y + +
Sbjct: 403 LLTERPLDRESRDEYNITITVTDLGAPRLKTQLNITVLVSDVNDNAPTFTQTSYTLFLRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I P G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINPDNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 LFALRSLDYEALQAFEFRVGATDRGSPA 540
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 71/140 (50%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE A+ L +TA D ++ T V ++VLD NDN+P F Q YR
Sbjct: 195 LVLDKALDREEEAELWLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYR----- 249
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLV----VIVPQTGELLL 174
++ S +S V + VSATD D +++Y L S+ + I P TGE+ L
Sbjct: 250 VQISEDSPVGFL-----VVKVSATDVDTGVNGEISYSLFQASDEIGKTFKINPLTGEIEL 304
Query: 175 TGDPPSDDVE-YELTVEAHD 193
++++ YE+ VEA D
Sbjct: 305 KKQLDFENLQSYEVNVEARD 324
>gi|291387481|ref|XP_002710171.1| PREDICTED: protocadherin alpha 13 [Oryctolagus cuniculus]
Length = 2126
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 80/152 (52%), Gaps = 20/152 (13%)
Query: 52 RNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVF 110
+N+ E S + LV +DREE+ ++SL++TA D K + ++VLD NDN+P F
Sbjct: 1562 QNNREQTSSLSLVLRKTLDREEMQEHSLLLTAVDGGKPELTGTVQLLIEVLDVNDNAPAF 1621
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD----ADGDKV-AYKLAVP---SNL 162
Q +Y+ V L++ N V + ++ATD A+GD V A++ P ++
Sbjct: 1622 DQLLYK--VRLLENVFNGTV--------VIQLNATDPDDGANGDVVYAFRKPTPPAVASA 1671
Query: 163 VVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
VI P TGE+ G + + YE+ VEA D
Sbjct: 1672 FVIHPSTGEIRTKGKLDFEQTKLYEIYVEAID 1703
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 10/93 (10%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ L+ Y ++Q N F+L +PT NS ++K + L+ +DRE+ ++SL++TAT
Sbjct: 160 NALLTYRLSQ---NEYFSLASPT-----NSKQTKR-LSLILKKSLDREKTPEFSLLLTAT 210
Query: 85 DVKGINKAET-HVTVDVLDENDNSPVFSQKVYR 116
D + T H+ V VLD NDN P F Q ++
Sbjct: 211 DGGQPALSGTVHLLVCVLDVNDNDPEFDQPEFK 243
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 37/187 (19%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVIT 82
+ L+ Y+++ N FALK TE +L LV +DREE+A+ +L++
Sbjct: 923 NALLTYTLSL---NEHFALKM--------VTEKNKSMLPELVLRKSLDREEIAELTLLLM 971
Query: 83 ATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG 140
D G+ + + V VLD NDN+P F + YR + L+ NV + +S+
Sbjct: 972 VVDGGRPGLTGS-VQIQVAVLDVNDNAPAFEEPAYRVV-------LSENV---QNDTSVV 1020
Query: 141 SVSATDAD---GDKVAYKL--AVPSN---LVVIVPQTGELLLTG--DPPSDDVEYELTVE 190
++A+D D +++Y + +P + VI P TGE+ + G D +D YE+ V+
Sbjct: 1021 HLNASDPDEGPNREISYGIRTILPESKKCTFVINPDTGEIRIYGILDYEENDA-YEIQVQ 1079
Query: 191 AHDLQSP 197
A D P
Sbjct: 1080 ATDKGVP 1086
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE V+ Y +V+TA D +A V V+V D NDN+P F+Q Y V +
Sbjct: 401 LVLDSGLDRELVSGYGVVVTARDAGSPALRASASVWVEVADVNDNAPAFAQAEYTVFVRE 460
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
N+ H + +VSA DAD +V+Y L
Sbjct: 461 ----NNAPGCH------LVTVSARDADARENARVSYSL 488
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE V+ Y +V+TA D +A V V+V D NDN+P F+Q Y V +
Sbjct: 1786 LVLDSGLDRELVSGYGVVVTARDAGSPALRASASVWVEVADVNDNAPAFAQAEYTVFVRE 1845
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
N+ H + +VSA DAD +V+Y L
Sbjct: 1846 ----NNAPGCH------LVTVSARDADARENARVSYSL 1873
>gi|62510888|sp|Q5DRD6.1|PCDBD_PANTR RecName: Full=Protocadherin beta-13; Short=PCDH-beta-13; Flags:
Precursor
Length = 798
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+T +DRE A+Y++ IT TD+ + K + ++TV + D NDN+P F+Q Y V +
Sbjct: 403 LLTERPLDRESRAEYNITITVTDLGTPMLKTQLNMTVLIADVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLTSLVSINADNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 LFALRSLDYEALQGFEFRVGASDHGSPA 540
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE A+ L +TA D ++ T V ++VLD NDN+P F Q YR
Sbjct: 195 LVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFYR----- 249
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLV----VIVPQTGELLL 174
++ S +S V + VSATD D +++Y L S + I P TGE+ L
Sbjct: 250 VQISEDSPVGFL-----VVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIEL 304
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+ ++ YE+ +EA D
Sbjct: 305 KKQLDFEKLQSYEVNIEARD 324
>gi|395817794|ref|XP_003782337.1| PREDICTED: protocadherin gamma-A9 [Otolemur garnettii]
Length = 846
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE 93
Q + NH F+L T + S E LV +DREE A + LV+TA+D ++
Sbjct: 188 QLSPNHHFSLDVQTGDDGTLSPE------LVLESALDREEEAAHHLVLTASDGGDPRRSS 241
Query: 94 T-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKV 152
T + V VLD NDN+PVF+Q +YR V + NV + ++ + + KV
Sbjct: 242 TVRIQVTVLDTNDNAPVFAQPIYRVKVLE-------NVPPGTQLLTVAASDPDEGANGKV 294
Query: 153 AYKL 156
AYK
Sbjct: 295 AYKF 298
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 18/127 (14%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN--KAE 93
N +++ T + NS E +L T+ +DRE+ ++Y++ +TATD +G E
Sbjct: 396 NGQVVCSIQENLTFRLENSEEDYYSLL--TAQILDREKASEYNITVTATD-RGTPPLSTE 452
Query: 94 THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD--- 150
H+T+ V D NDN P FSQ Y + + + + +SI SV+A D D +
Sbjct: 453 IHITLQVTDINDNPPAFSQASYSVYLPE----------NNPRGTSIFSVTAHDPDSNENS 502
Query: 151 KVAYKLA 157
++ Y LA
Sbjct: 503 RIIYSLA 509
>gi|344287782|ref|XP_003415631.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 3-like [Loxodonta
africana]
Length = 4556
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 15/117 (12%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
MENS V + I ++ + Y IT GN + FA+ K+G
Sbjct: 1157 MENSPKDVSV--IQIQAEDPDSSSNEKLTYRITSGNPQNFFAIN------------IKTG 1202
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYR 116
+++ TS +DRE+ A++ L +T TD K T V V VLDENDN P F +KVY+
Sbjct: 1203 LIMTTSRKLDREQQAEHFLEVTVTDGGSSPKQSTIWVVVQVLDENDNKPQFPEKVYQ 1259
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 113/280 (40%), Gaps = 44/280 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYS+ G+ N+ F L +P + E++ T +DRE V YSL+ ATD
Sbjct: 3063 IRYSL-YGSGNNEFFL-DPESGELK------------TLALLDRERVPVYSLIARATDGG 3108
Query: 88 G-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
G +++ H+ ++ D NDN PVFS Y + + N + + + +V
Sbjct: 3109 GRFCQSDVHLILE--DVNDNPPVFSSDHY-------NACVYENTATKALLTRVQAVDPDV 3159
Query: 147 ADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE--YELTVEAHDLQSPSRYAREP 204
KV Y LA ++ + +++ P +++ Y ++V+A D QSP +
Sbjct: 3160 GINRKVVYSLADSADGFFSIDGLSGIIILEQPLDRELQSSYSISVQATD-QSPGQALSSF 3218
Query: 205 AQVWLQF-----NSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEM 259
V + N PV + L + P V T + D
Sbjct: 3219 TTVTITVLDINDNPPVFERRDYLVTV------PEDTSPGTQVLTVFATSK------DIGT 3266
Query: 260 EGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
I + + E+ KF+I + I+V E D + K++
Sbjct: 3267 NAEITYLIRSGNEQGKFRINPKTGGISVSEVLDYELCKKF 3306
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 79/187 (42%), Gaps = 23/187 (12%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y + GN + F + NP SGV+ T +D E + Y L+I AT++ G+
Sbjct: 1702 YEVKDGNVDGMFTI-NP-----------YSGVI-TTRKALDYERSSSYQLIIQATNMAGM 1748
Query: 90 NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
T V + V+DENDN+PVF Y G L + N +S + ATDAD
Sbjct: 1749 ASNAT-VNIQVVDENDNAPVFLFSQYS---GSLSEAAPVNSIVRSADNSPLVIRATDADS 1804
Query: 150 DK---VAYKL--AVPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPSRYARE 203
+ + Y++ + + TG + + + + + V D SP A
Sbjct: 1805 SRNALLVYQIVESTAKKFFTVDSNTGAIRTIANLDHETIAHFHFHVHVRDSGSPQLTAES 1864
Query: 204 PAQVWLQ 210
P +V ++
Sbjct: 1865 PVEVNIE 1871
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 16/99 (16%)
Query: 23 HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVIT 82
P+ +++SI G+ ++ FA+ E G++ V +DRE V+ YSL++
Sbjct: 3370 QPNGQIQFSIVNGDRDNEFAV------------EPVLGLVKVKK-KLDRERVSGYSLLVQ 3416
Query: 83 ATDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIV 119
A D GI + TV D+ D NDN PVF+ Y ++
Sbjct: 3417 AVD-SGIPAMSSTATVNIDISDVNDNGPVFTPANYTAVI 3454
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 66/150 (44%), Gaps = 29/150 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT GN FAL ++N + + +DREE Y L ITATD
Sbjct: 2959 VSYHITGGNPRGRFALG-----LVQNEWK------VYVKRPLDREEQDIYFLNITATD-- 3005
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G+ + V V V D NDNSPV Q Y + + SN I VSA DA
Sbjct: 3006 GLFVTQAMVEVTVSDVNDNSPVCDQVAYTAL---FPEDIPSN-------KIILKVSAKDA 3055
Query: 148 D----GDKVAYKL-AVPSNLVVIVPQTGEL 172
D GD + Y L +N + P++GEL
Sbjct: 3056 DIGSNGD-IRYSLYGSGNNEFFLDPESGEL 3084
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 53 NSTESKSGV-LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS 111
+S +++ GV +V + +D E+ + Y++ + TD G N A T V + VLD NDN P FS
Sbjct: 1403 SSFDAEKGVGTIVIAKPLDAEQRSFYNMSVEVTD--GTNVAVTQVFIKVLDNNDNGPEFS 1460
Query: 112 QKVY 115
Q Y
Sbjct: 1461 QPNY 1464
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 73/170 (42%), Gaps = 21/170 (12%)
Query: 43 LKNPTTHEIRN-----STESKSGVLLVTSGDIDREEVAQYSLVITAT-DVKGINKAETHV 96
L P + I N +S SGV+ T DREE Y LV+ A+ ++ + A V
Sbjct: 2010 LNEPLKYSILNPGNKFKIKSTSGVIQTTGVPFDREEQELYELVVEASRELDHLRVARVVV 2069
Query: 97 TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVA 153
V++ D NDNSPVF Y V + + I V+A D D +V
Sbjct: 2070 RVNIEDINDNSPVFVGLPYYAAVQ----------VDAEPGTLIYQVTAIDKDKGANGEVT 2119
Query: 154 YKLAVPSNLVVIVPQTGELLLTGDPPSD--DVEYELTVEAHDLQSPSRYA 201
Y L I P +G ++L SD ++EY +T+ A D PS A
Sbjct: 2120 YILQDDYGHFEINPNSGNVILKEAFNSDLSNIEYGVTILARDGGKPSLSA 2169
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 81/181 (44%), Gaps = 33/181 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS+ GT V L + ++YSI G+ F + + +SGV
Sbjct: 1053 ENSRIGTSV--LQVTAHDEDSGRDGEIQYSIRDGSGLGRFNI------------DDESGV 1098
Query: 62 LLVTSGDI-DREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIV 119
+T+ DI DRE + Y L + ATD + T V +++ D NDN+P+ S+ ++ +V
Sbjct: 1099 --ITTADILDRETMGSYWLTVYATDRGVVPLYSTIEVYIEIEDVNDNAPLTSEPIFYPVV 1156
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAV--PSNLVVIVPQTGELLL 174
+ + K S+ + A D D +K+ Y++ P N I +TG ++
Sbjct: 1157 ----------MENSPKDVSVIQIQAEDPDSSSNEKLTYRITSGNPQNFFAINIKTGLIMT 1206
Query: 175 T 175
T
Sbjct: 1207 T 1207
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 125/311 (40%), Gaps = 57/311 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E S GT V L ++ + +++V Y I Q N T +S SG+
Sbjct: 2297 EASLIGTPV--LQVVSTDADSENNKMVHYQIVQDTYNSTDYFH----------IDSASGL 2344
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIV 119
+L T+ +D E V +L + ATD G + V V + D NDN P+F+Q +Y V
Sbjct: 2345 IL-TARMLDHELVQHCTLKVRATD-SGFPSLSSEVLVHIYISDINDNPPIFNQLIYESYV 2402
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIV--PQTGELLL 174
+L H+ + V A+DAD D++ Y + ++ + ++G + L
Sbjct: 2403 SELAPR-----GHF-----VTRVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSGVITL 2452
Query: 175 TGDPPSD-DVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPH 233
+ + Y L V D S AQV ++ L S++ +
Sbjct: 2453 SNHRKQRMEPLYSLNVSVSDGLFTST-----AQVHIRVLGANLYSPAF-------SQSMY 2500
Query: 234 RIEKRRVTRAVRPTKRIDFSETDGE--MEGRIVFALEKETEREKFKIRDENPWITVDENG 291
E R A TK I TDG+ G+I +A+ + +++F I D NG
Sbjct: 2501 VAEVRE--NAAAGTKVIHVRATDGDPGTYGQISYAIINDFAKDRFLI---------DSNG 2549
Query: 292 DVRVKKRWDFE 302
V +R D E
Sbjct: 2550 QVLTTERLDRE 2560
>gi|269914130|ref|NP_001019301.2| protocadherin beta-13 precursor [Pan troglodytes]
Length = 798
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+T +DRE A+Y++ IT TD+ + K + ++TV + D NDN+P F+Q Y V +
Sbjct: 403 LLTERPLDRESRAEYNITITVTDLGTPMLKTQLNMTVLIADVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLTSLVSINADNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 LFALRSLDYEALQGFEFRVGASDHGSPA 540
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE A+ L +TA D ++ T V +++LD NDN+P F Q YR
Sbjct: 195 LVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEILDVNDNAPEFEQPFYR----- 249
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLV----VIVPQTGELLL 174
++ S +S V + VSATD D +++Y L S + I P TGE+ L
Sbjct: 250 VQISEDSPVGFL-----VVKVSATDVDTGVNGEISYSLFQASEEIGKTFKINPLTGEIEL 304
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+ ++ YE+ +EA D
Sbjct: 305 KKQLDFEKLQSYEVNIEARD 324
>gi|426231061|ref|XP_004023513.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B6 [Ovis aries]
Length = 847
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 73/148 (49%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT GD+DRE+ +Y++ ITATD K + T +T+ + D NDN+PVF Q Y V +
Sbjct: 444 LVTDGDLDREQTPEYNVTITATDRGKPPLSSSTTITLHITDINDNAPVFHQASYVVHVPE 503
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVP-------SNLVVIVPQTGE 171
+ + I VSA+D D V+Y + S+ V + PQ+G
Sbjct: 504 ----------NNPPGAPIAQVSASDPDLGPNGHVSYSIVASDLQPRALSSYVSVNPQSGV 553
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
+ + + +ELT++A D SP+
Sbjct: 554 VFAQRAFDHEQLRAFELTLQARDHGSPA 581
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 11/81 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DREE +SL++TA D ++ T + + V D NDN PVFSQ YR V +
Sbjct: 240 LDREEQRSHSLILTAWDGGDPPRSATAQIEISVKDTNDNPPVFSQDEYRLSVSE------ 293
Query: 128 SNVSHWKKFSSIGSVSATDAD 148
+ SS+ V+ATD D
Sbjct: 294 ----NLPPGSSVLLVTATDQD 310
>gi|358413178|ref|XP_002684277.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-2 [Bos taurus]
gi|359067543|ref|XP_002689297.2| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-2 [Bos taurus]
Length = 769
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 72/146 (49%), Gaps = 20/146 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+ +DRE ++Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 395 LVTNAALDREARSKYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLWVRE 454
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD-KVAYK-------LAVPSNLVVIVPQTGELL 173
NS H IGSVSATD D + +V Y L ++LV I P G L
Sbjct: 455 ----SNSPALH------IGSVSATDTDANAQVTYSLLPPPDPLVXLASLVSINPDNGHLF 504
Query: 174 -LTGDPPSDDVEYELTVEAHDLQSPS 198
LT +E V A D SP+
Sbjct: 505 ALTSLDYEALRAFEFHVGATDRGSPA 530
>gi|194745576|ref|XP_001955263.1| GF18671 [Drosophila ananassae]
gi|190628300|gb|EDV43824.1| GF18671 [Drosophila ananassae]
Length = 1704
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 26/169 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI GND FA+ +SGV++V +DRE + +Y L++ A D
Sbjct: 635 VVYSIISGNDLRQFAVG------------QESGVIVVIR-KLDRESLTRYQLIVKAEDTG 681
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G++ + T V + V D ND +P F +I V K +S+G V ATDA
Sbjct: 682 GLSSSAT-VNIKVTDINDKNPEFDASTLPYIF---------QVDEGKAQASVGVVHATDA 731
Query: 148 D-GDKVAYKLAVPSNLVVIVPQT-GELLLTGDPPSDDV-EYELTVEAHD 193
D G ++P+++ + T GE+ + + + EY+ V A D
Sbjct: 732 DEGINAEITYSIPTDIPFTINATSGEIQTAKELDYETLNEYKFVVTAKD 780
>gi|449676476|ref|XP_002167194.2| PREDICTED: protocadherin Fat 3-like [Hydra magnipapillata]
Length = 2629
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 70/143 (48%), Gaps = 18/143 (12%)
Query: 39 HTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTV 98
++F N +H NS ++G +L T +D E ++Y L +TA D G T VTV
Sbjct: 474 YSFESNNEVSHFFINS---RTGDILTTQL-LDAETKSEYLLKVTAAD-HGKPSKSTFVTV 528
Query: 99 --DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYK 155
++ D NDN P+F Y F V H +F IG V+A+D D K++Y
Sbjct: 529 QINLADINDNKPIFYAAKYNFFV--------EKFLHSNQF--IGKVTASDPDINTKLSYG 578
Query: 156 LAVPSNLVVIVPQTGELLLTGDP 178
L+ S+ + I TG L LTG P
Sbjct: 579 LSKTSSFIKIDSVTGILYLTGSP 601
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 15/107 (14%)
Query: 10 VKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDI 69
+K + + VA+ K P +++Y I G+ N F + N T +++ S+ +
Sbjct: 1163 LKKIILRVAAEDKDPSDVLKYQI-HGDGNGKFYI-NEKTGDLKASSY------------L 1208
Query: 70 DREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYR 116
D E +Y + D+ G + + + + V+D NDNSP+F Q +Y+
Sbjct: 1209 DFEVETKYRFKVVVIDLAG-HTCTSDIFIRVIDMNDNSPIFLQPLYK 1254
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 65/140 (46%), Gaps = 18/140 (12%)
Query: 60 GVLLVTSGDI-DREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
GV++ + I D E V+ Y L I T I A T+V + ++D NDN+PVF QK Y F
Sbjct: 106 GVIITDNSSIFDYENVSFYILHI-ETAYNNI-YARTYVNITIIDVNDNTPVFEQKKY-FH 162
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGEL-LL 174
D+++ KK + + V A DAD KV Y + TGE+ LL
Sbjct: 163 PIDIET---------KKGTVLLKVQANDADSGENGKVRYSMLTKEEYFTCDSITGEISLL 213
Query: 175 TGDPPS-DDVEYELTVEAHD 193
G S Y L ++A D
Sbjct: 214 KGFIKSLTKPAYSLYIQASD 233
>gi|431892556|gb|ELK02989.1| Protocadherin beta-17 [Pteropus alecto]
Length = 946
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 84/190 (44%), Gaps = 37/190 (19%)
Query: 37 DNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETH 95
DN F LK PT K+ LVT +DRE +Y++ IT TD+ K E +
Sbjct: 388 DNLPFLLK-PTF---------KNFYTLVTERPLDRETRTEYNITITVTDLGTPRLKTEHN 437
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KV 152
+TV V D NDN+P F+Q Y V + NS H IGSVSATD D +V
Sbjct: 438 ITVIVSDVNDNAPAFTQTSYTLFVRE----NNSPALH------IGSVSATDRDAGANAQV 487
Query: 153 AYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD-----LQSPSR 199
Y L P ++LV I G+L + + E V A D L SP+
Sbjct: 488 TYSLLPPQDPQLPLASLVSINADNGQLFALRALDYEALRVLEFGVGAVDRGSPALSSPAL 547
Query: 200 YAREPAQVWL 209
+P V+L
Sbjct: 548 VLADPLTVYL 557
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 13/116 (11%)
Query: 35 GNDNHTFALKNPTTH-EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE 93
G N+T + NP H ++ +S E + LV +DRE+ + L +TA D ++
Sbjct: 166 GVQNYTLS-PNPHFHLKLEDSDEGRKYPELVLDQSLDREKEPELRLTLTALDGGSPPRSG 224
Query: 94 THVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
T V V VLD NDN+P F +Y + + S L+S V VSATD D
Sbjct: 225 TAVVRVLVLDINDNAPEFQSPLYEVQIPE-NSPLDSLVV---------KVSATDLD 270
>gi|194208467|ref|XP_001502920.2| PREDICTED: protocadherin Fat 4 isoform 1 [Equus caballus]
Length = 4981
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 58/120 (48%), Gaps = 28/120 (23%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
VRYSI+ G+ + R ++SGV+ T +DREE Y L I ATD
Sbjct: 724 VRYSISAGDRS-------------RFQVNAQSGVI-STRMALDREEKTAYQLQIVATDGG 769
Query: 88 GINKA-ETHVTVDVLDENDNSPVFSQKVYRFI----------VGDLKSS---LNSNVSHW 133
+ + VT+ VLD DN PVFSQ Y F+ VG + +S LNSN+S+
Sbjct: 770 NLQSPNQAIVTITVLDTQDNPPVFSQAAYSFVVFENVALGYHVGSVSASTMDLNSNISYL 829
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 31/189 (16%)
Query: 11 KGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDID 70
K L +L P+ + Y I GN H+F++ N T EIR+ +D
Sbjct: 2686 KILTVLAMDKDSGPNGQLDYEIVNGNKEHSFSI-NHATGEIRSIRP------------LD 2732
Query: 71 REEVAQYSLVITATDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
RE+++QY L I ++D KG T V V ++LDENDN+P FSQ ++ NS
Sbjct: 2733 REKISQYVLTIKSSD-KGSPSQSTSVKVIINILDENDNAPRFSQIFSAHVLE------NS 2785
Query: 129 NVSHWKKFSSIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE- 184
+ + ++ V+ +D D A Y + S I P TG+++++ +D +
Sbjct: 2786 PLGY-----TVTRVTTSDEDIGINAISRYSVMDTSLPFTINPSTGDIVISRPLNREDTDR 2840
Query: 185 YELTVEAHD 193
Y + V AHD
Sbjct: 2841 YRIRVSAHD 2849
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 83/185 (44%), Gaps = 40/185 (21%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATD 85
L+ Y + +GN+ FA+ +S SG V L+ G +D E YSLVI A D
Sbjct: 1244 LIHYYVIKGNEERQFAI------------DSTSGQVTLI--GKLDYEATPAYSLVIQAVD 1289
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVS 143
+ T + +D+LDENDN+P F KS+L +V + + SV+
Sbjct: 1290 SGATSLNSTCTLNIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVSSVT 1338
Query: 144 ATDAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
ATD+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1339 ATDSDSGDNADLHYSITGTNNHGTFSISPNTGSIFLA---KKLDFETQSLYKLNITAKDQ 1395
Query: 195 QSPSR 199
P R
Sbjct: 1396 GRPPR 1400
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 39/53 (73%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ Y+L++ ATD KG + T V V VLD NDN+P+F+Q +Y+
Sbjct: 2109 TGELDREEVSNYTLMVVATD-KGQPSLSSSTEVVVMVLDINDNNPIFAQALYK 2160
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 85/189 (44%), Gaps = 28/189 (14%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVL-LVTSGDIDREEVAQYSLVITATDVKG 88
Y I QGN+ F L +I + + L LV+ G +DRE QY L++ D KG
Sbjct: 174 YRIIQGNEAGRFRL------DITLNPSGEGAFLHLVSKGGLDREVTPQYQLLVEVED-KG 226
Query: 89 INKAETH--VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
K + V V V D NDN PVF Y+ V + ++ V SS+ V+A D
Sbjct: 227 EPKRRGYLQVNVTVQDINDNPPVFGSSHYQAGVPE-----DAAVG-----SSVLQVAAAD 276
Query: 147 AD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSPSRY 200
AD + Y+L + P+TG L+T P D +Y LTV+A D PS
Sbjct: 277 ADEGTNADIRYRLQDEGTPFQMDPETG--LITVREPLDFEARRQYSLTVQAMDRGVPSLT 334
Query: 201 AREPAQVWL 209
R A + L
Sbjct: 335 GRAEALIQL 343
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 71/174 (40%), Gaps = 29/174 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ FA+ T L T+ IDREE + Y L + A+
Sbjct: 826 ISYLITTGDQKGMFAINQVTGQ-------------LTTASVIDREEQSFYQLKVVAS--G 870
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V + V D NDNSP F Q V S+N V +W+ SI A D
Sbjct: 871 GTVTGDTMVNITVKDLNDNSPHFLQAV---------ESVNV-VENWQTGHSIFQAKAVDP 920
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSP 197
D V Y L P NL I + G + L G Y++ + A D+ P
Sbjct: 921 DEGVNGMVLYSLKQNPKNLFTINEKNGNISLLGPLDVHAGSYQIEILASDMGVP 974
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 58/111 (52%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G K + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1754 GDGSKIMQLTAMDADEGANALVTYTIISGADD-SFRI------------DPESGDLIATK 1800
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + V D ND++P FS+ VY F
Sbjct: 1801 -RLDRERRSKYSLLVRADD--GLQSSDMRINITVSDVNDHTPKFSRPVYSF 1848
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 81/177 (45%), Gaps = 35/177 (19%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKV 114
K+G + V SG +DRE+ + SL + A + ++G + E V V VLD ND PVFS +
Sbjct: 3351 KTGQIYV-SGLLDREKEERVSLKVLAKNFGSIRGADIDEVTVNVTVLDAND-PPVFSLNI 3408
Query: 115 YRFIVGD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLV 163
Y + + S+ +S+ V W +FS IGS + A
Sbjct: 3409 YSVQISEGVPTGTHVTFVSAFDSDSVPSWSRFSYFIGSGNENGA---------------F 3453
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
I PQTG++ +T + + + Y LTV A D +PS V L+ N P+L
Sbjct: 3454 SINPQTGQITVTAELDRETLPIYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPML 3510
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 26 QLVRYSITQGN--DNHT--FALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVI 81
+L+ T G+ DN T F+L+ T + +S SG L S +DREE YSL++
Sbjct: 601 ELLVLGATDGDLGDNGTVRFSLQEAETDQRSFRLDSVSGRLSTIS-SLDREEQGFYSLLV 659
Query: 82 TATDVKGINKAE-THVTVDVLDENDNSPVF 110
ATD+ ++ + V +LD NDNSPVF
Sbjct: 660 LATDLGSPPQSSIARINVSLLDVNDNSPVF 689
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 73/173 (42%), Gaps = 27/173 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y + GN+++ F L S SG L VT +DRE + LVITATD
Sbjct: 2295 LSYVLFGGNEDNAFTL-------------SASGELRVTQ-SLDRETKEHFVLVITATDAG 2340
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
T + V V D NDN P F K+Y L + + + V+A+D
Sbjct: 2341 SPALTGTGTINVIVDDINDNVPTFPSKMY----------LTTIPEDAPTGTDVLLVNASD 2390
Query: 147 ADGDKVA-YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSP 197
AD A +L ++ I P TG+++ + + E Y L V D SP
Sbjct: 2391 ADASTNAVIRLIGGNSQFTINPSTGQIITSALLDRETKENYTLVVVCSDAGSP 2443
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 27/123 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
+ YSI +GN F + G L + S ++DRE +Y L++ A+D
Sbjct: 1031 IAYSIAEGNTGDAFGIF-------------PDGQLYIKS-ELDRELQDRYVLLVIASDRA 1076
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
V+ ++ A +VT+ + D NDN P+F+ Y F + + SS+G VSA
Sbjct: 1077 VEPLS-ATVNVTIILEDVNDNRPLFNSTNYTFYFEE----------EQRAGSSVGKVSAL 1125
Query: 146 DAD 148
D D
Sbjct: 1126 DKD 1128
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 30/156 (19%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN++ GT V L + A S + + I GN+ F E+++S +
Sbjct: 369 ENAQVGTVVALLTVTDADS-PAANGNISVQILGGNEQRHF--------EVQSSKVPNLSL 419
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAET--------HVTVDVLDENDNSPVFSQK 113
+ V S +DRE + Y+L ++ +D G A + + V D ND+ PVF+Q+
Sbjct: 420 IKVASA-LDRERIPSYNLTVSVSDNYGAPPAAAVQARSSVASLVIFVNDINDHPPVFAQQ 478
Query: 114 VYRFIVGDLKSSLNSNVS-HWKKFSSIGSVSATDAD 148
VYR N+S S + VSATD D
Sbjct: 479 VYRV-----------NLSEEAPPGSYVSGVSATDGD 503
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 129/315 (40%), Gaps = 65/315 (20%)
Query: 30 YSITQGND--NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+++T +D N A + + T K+GVL V +DRE + Y+LV+ D+
Sbjct: 1966 FNVTDADDGINSQLAYSIASGDSLGQFTVDKNGVLKVLKA-LDRESQSFYNLVVQVHDLP 2024
Query: 88 GINKAE----THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV- 142
+ + V++ +LD NDN P F L+ +++ + + I +V
Sbjct: 2025 QLPASRFTSTAQVSIILLDVNDNPPTF---------------LSPKLTYIPENTPIDTVV 2069
Query: 143 ---SATDADG---DKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDL 194
ATD D + Y L P N I GE+ LTG+ ++V Y L V A D
Sbjct: 2070 FKAQATDPDSGPNSYIEYTLLNPLGNKFSIGTIDGEVRLTGELDREEVSNYTLMVVATDK 2129
Query: 195 QSPSRYAREPAQVW---LQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRID 251
PS + V + N+P+ ++A +++E T + T I
Sbjct: 2130 GQPSLSSSTEVVVMVLDINDNNPIF------------AQALYKVEINENT--LTGTDIIQ 2175
Query: 252 FSETDGE--MEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEELGPEKT 309
TDG+ G++ + + ++F+I ITV + L EKT
Sbjct: 2176 VCATDGDEGTNGQVRYGIVDGDANQEFRIDSVTGAITVA-------------KPLDREKT 2222
Query: 310 IDFWVTINNQATNGG 324
+++T+ QAT+ G
Sbjct: 2223 PTYFLTV--QATDRG 2235
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 98/244 (40%), Gaps = 46/244 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+V S ++RE+ +Y + ++A D T VT+ V D NDN+P FS+ Y +L
Sbjct: 2827 IVISRPLNREDTDRYRIRVSAHDSGW--TVSTDVTIFVTDVNDNAPRFSRPSYYLDCPEL 2884
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELL------ 173
+ + S V+ VSA+D D +V Y + S I TGE+
Sbjct: 2885 -TEIGSKVTQ---------VSASDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQVLK 2934
Query: 174 ---LTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSE 230
++G + + V + D +PS + + +D
Sbjct: 2935 YQNVSGFSNVNINRHSFIVTSSDRGNPSLLSETTVTI---------------NTVDSNDN 2979
Query: 231 APHRIEKRR---VTRAVR-PTKRIDFSETDGE---MEGRIVFALEKETEREKFKIRDENP 283
AP +E + VT+ V+ TK I + D + + + + + E KFK+ +
Sbjct: 2980 APQFLEMKYFTPVTKNVKVGTKLIKVTAVDDKDFGLNSEVEYFISSENHLGKFKLDNNTG 3039
Query: 284 WITV 287
WI+V
Sbjct: 3040 WISV 3043
Score = 37.7 bits (86), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + + + + VRY I G+ N F + +S +G
Sbjct: 2165 ENTLTGTDI--IQVCATDGDEGTNGQVRYGIVDGDANQEFRI------------DSVTGA 2210
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
+ V +DRE+ Y L + ATD + +T V++ +LD ND P+F Y
Sbjct: 2211 ITVAK-PLDREKTPTYFLTVQATDRGSTPRTDTSTVSIVLLDINDFVPIFELSPY 2264
>gi|62510903|sp|Q5DRF1.1|PCDAD_PANTR RecName: Full=Protocadherin alpha-13; Short=PCDH-alpha-13; Flags:
Precursor
Length = 950
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 22/157 (14%)
Query: 48 THEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDN 106
T + +NS E S + LV +DREE+ ++SL++TA+D K + + +LD NDN
Sbjct: 179 TLDAQNSLEQMSSLSLVLRKTLDREEIQEHSLLLTASDGGKPELTGTVQLLITILDVNDN 238
Query: 107 SPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNL 162
+P F Q VY+ V L+++ N + + ++ATD D GD + Y P +
Sbjct: 239 APEFYQSVYKVTV--LENAFNGTL--------VIKLNATDPDDGTNGD-IVYSFRRPVSP 287
Query: 163 VVIV-----PQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ P GE+ G ++ + YE++VEA D
Sbjct: 288 AVVYAFTINPNNGEIRTKGKLDFEEKKLYEISVEAVD 324
Score = 44.7 bits (104), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE V+ Y LV+TA D + A V+V V D NDN+P F+Q Y V +
Sbjct: 407 LVLDSALDRESVSAYELVVTARDGGSPSLWATASVSVGVADVNDNAPAFAQPEYTVFVKE 466
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKL 156
N H I +VSA DAD + V+Y L
Sbjct: 467 ----NNPPGCH------IFTVSAQDADAQENALVSYSL 494
>gi|410948359|ref|XP_003980908.1| PREDICTED: protocadherin gamma-B7 [Felis catus]
Length = 810
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 26/153 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT G +DRE+ +Y++ ITATD +GI + T +T+ + D NDN+P+F Q Y V
Sbjct: 404 LVTDGPLDREQTPEYNVTITATD-RGIPPLSSSTTITLHITDVNDNTPIFHQASYVVHVA 462
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL--------VVIVPQT 169
+ + +SI VSA+D D +V+Y + V S+L V + Q+
Sbjct: 463 E----------NNPPGASIAQVSASDPDLGPNGRVSYSI-VASDLEPRALASYVSVSAQS 511
Query: 170 GELLLTGDPPSDDVE-YELTVEAHDLQSPSRYA 201
G + + + +ELTV+A D SP+ A
Sbjct: 512 GVVFAQRAFDHEQLRAFELTVQARDQGSPALSA 544
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE + + LV+TA D ++ T + + V+D NDN PVFSQ +YR
Sbjct: 194 LVLKKTLDRETQSSHHLVLTAFDNGNPPRSSTAQIRILVVDANDNPPVFSQDMYRV---- 249
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
SL V +S+ VSATD D
Sbjct: 250 ---SLPEGVPPG---TSVVQVSATDQD 270
>gi|348566837|ref|XP_003469208.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Cavia
porcellus]
Length = 4579
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 89/190 (46%), Gaps = 25/190 (13%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y I GN F + NP SG + +T +D E + Y+L+I T++
Sbjct: 1698 VVYEIKDGNIGDAFDI-NP-----------HSGTV-ITQKALDFETLPIYTLIIQGTNMA 1744
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G++ T + V + DENDN PVF Q Y ++ + +S+NS V + + + ATDA
Sbjct: 1745 GLS-TNTTMLVHLQDENDNVPVFMQAEYSGLISE-SASINSVVLTDRNVPLV--IRATDA 1800
Query: 148 DGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQSPSRY 200
D + + Y + PS I TG + +L+ D V + TV+ HD+ +P +
Sbjct: 1801 DKESNALLVYHIVEPSVHKYFAIDSSTGAIHTVLSLDYEETSV-FHFTVQVHDMGTPRLF 1859
Query: 201 AREPAQVWLQ 210
A A V +
Sbjct: 1860 AEYAANVTIH 1869
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS T V G P+ + P +RY I G++ + F + + +R T+
Sbjct: 46 ENSAXKTYV-GHPVKMGIYITDPLWELRYKIVSGDNENLFKAEEYILGDFCFLRIRTKGG 104
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A T V V VLD ND P+FS Y
Sbjct: 105 NTAIL------NREVKDHYTLIVKAVEKNTNAEARTKVRVQVLDTNDLRPLFSPTSYSV- 157
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 158 ------SLPENTAIR---TSIAKVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGAVVLT 208
Query: 176 G 176
G
Sbjct: 209 G 209
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 34/200 (17%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + YSI GN++ F++ ++K+G + + +
Sbjct: 3247 GTEVLQLYAASRDIEANAEITYSIISGNEHGKFSI------------DAKTGAIFIIE-N 3293
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+D E +Y L + ATD + ++ V ++V D NDN+P FSQ Y ++ + + L
Sbjct: 3294 LDYESAHEYYLTVEATDGGTPSLSDVVTVNINVTDINDNTPAFSQDTYTAVISE-DAVLE 3352
Query: 128 SNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNL-------VVIVPQTGELLLTGDPPS 180
S+ +V A DADG Y L S + I P GE+ +T
Sbjct: 3353 ---------QSVITVMADDADGP--LYSLIHYSIIEGNQGGPFTIDPVKGEVKVTKLLDR 3401
Query: 181 DDVE-YELTVEAHDLQSPSR 199
+ + Y LT++A D SP R
Sbjct: 3402 ETISGYTLTIQASDNGSPPR 3421
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ L+ YSI +GN F + +P E++ + +DRE ++ Y+L I A+
Sbjct: 3368 YSLIHYSIIEGNQGGPFTI-DPVKGEVK------------VTKLLDRETISGYTLTIQAS 3414
Query: 85 DVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
D + T V +DV D NDN+P+FS+ Y I+
Sbjct: 3415 DNGSPPRVNTTTVNIDVSDVNDNAPLFSKGNYSVII 3450
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 13/90 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1175 LMYKITSGNPQGFFSI------------HPKTGLITTTSRRLDREQQDEHILEVTVTDNG 1222
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYR 116
K+ V V +LDENDN P F QK Y+
Sbjct: 1223 TPPKSTIARVIVKILDENDNKPQFLQKFYK 1252
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 77/175 (44%), Gaps = 36/175 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N I+N + + +DRE+ Y L ITATD
Sbjct: 2955 VTYFITGGDALGQFAVEN-----IQNEWK------VYVKKPLDREKKDSYLLTITATD-- 3001
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD--LKSSLNSNVSHWKKFSSIGSVSAT 145
G ++ V V VLD NDNSPV + +Y + + L L I VSAT
Sbjct: 3002 GTFSSKAIVEVKVLDANDNSPVCEKTLYSDTIPEDALPGKL------------IMQVSAT 3049
Query: 146 DAD---GDKVAYK-LAVPSNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHD 193
DAD ++ Y L + + P TGEL P D E Y L V+A D
Sbjct: 3050 DADIRSNAEITYTLLGSGAEKFRLNPDTGELKTLA--PLDREEQAVYNLLVKATD 3102
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 105/250 (42%), Gaps = 36/250 (14%)
Query: 50 EIRNSTESKSGV----------LLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVT 97
EIR S SGV ++ TS +DRE + Y L + ATD +G+ + +
Sbjct: 1069 EIRYSIRDGSGVGVFKIDEETGVIETSDRLDRESTSHYWLTVYATD-QGVVPLSSFIEIY 1127
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAY 154
++V D NDN+P S+ VY + + + K S+ + A D D DK+ Y
Sbjct: 1128 IEVEDVNDNAPQTSEPVYYPEI----------MENSPKDVSVVQIEAFDPDSSSNDKLMY 1177
Query: 155 KLAV--PSNLVVIVPQTGELLLTG---DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL 209
K+ P I P+TG + T D D E+ L V D +P + A+V +
Sbjct: 1178 KITSGNPQGFFSIHPKTGLITTTSRRLDREQQD-EHILEVTVTDNGTPPK--STIARVIV 1234
Query: 210 QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVR-PTKRIDFSETDGEMEGRIVFALE 268
+ Q LQ K P R + R A R P R+ ++ D I +++E
Sbjct: 1235 KILDENDNKPQFLQKF-YKIRLPEREKPERERNAKREPLYRVIATDKDEGPNAEISYSIE 1293
Query: 269 KETEREKFKI 278
+ E +F I
Sbjct: 1294 EGNEHGRFFI 1303
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E+ Q+ + + A D G+ ++ VTVDV D NDN P+F Q++Y ++ +
Sbjct: 2349 LDYEQFQQHKIFVRAID-GGMPPLSSDVIVTVDVTDLNDNPPLFDQQIY-------EAKI 2400
Query: 127 NSNVSHWKKFSSIGSVSATDADGDKVAYKL 156
+ + H + + + A +D D++ Y +
Sbjct: 2401 SEHAIHGHFVTCVKAYDADSSDIDRLEYSI 2430
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 15/127 (11%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
I R++V+ + +T D KA T V V VL N N P F+Q YR +S +
Sbjct: 427 IKRQQVSHFEFEVTTGD----RKASTKVLVKVLSANSNPPEFTQTAYR-------ASFDE 475
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT 188
N + +V D + V Y +A + + ++ + T S++++YEL
Sbjct: 476 NALIGTTVLRVSAVDPDDGENGYVTYSIANVNPVPFVINHFTGAVST----SENLDYELM 531
Query: 189 VEAHDLQ 195
+ L+
Sbjct: 532 PRVYTLR 538
>gi|194219840|ref|XP_001502292.2| PREDICTED: protocadherin beta-2-like [Equus caballus]
Length = 798
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 31/196 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+ +DRE A+Y++ IT TD+ K + ++TV V D NDN+P F+Q Y V +
Sbjct: 405 LVTNTALDRESRAEYNITITVTDLGTPRLKTQHNITVLVSDVNDNAPAFTQTSYTLWVRE 464
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D ++ Y L P ++LV I G
Sbjct: 465 ----NNSPALH------IGSVSATDTDAGANAQLTYSLLPPQDPHLPLASLVSINADNGH 514
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ-----L 221
L + ++ +E V A D SP+ ++ +V + NSP VL Q
Sbjct: 515 LFALRSLDYEALQAFEFGVGATDRGSPALSSQARVRVLVLDANDNSPFVLYPLQNGSAPC 574
Query: 222 LQMIDRKSEAPHRIEK 237
+++ R +EA + + K
Sbjct: 575 TELVPRAAEAGYLVTK 590
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 22/161 (13%)
Query: 45 NPTTHEIRNSTESKSGVLL---VTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDV 100
+P +H +S G++L V +DREE ++ L +TA D ++ T V ++V
Sbjct: 175 SPNSHFHLKLQDSADGMILPQLVLDKALDREEQPEFRLTLTAVDGGTPPRSGTALVRIEV 234
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA 157
LD NDN+P F+ +Y V + NS + S + VSA+D D +++Y +
Sbjct: 235 LDINDNAPEFANLLYEVQVPE-----NSPIG-----SQVAVVSASDLDIGAYGEISYVFS 284
Query: 158 VPSNLV----VIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
S + I ++GELLLT + ++ Y L V+A D
Sbjct: 285 QASEDIRKTFRINAKSGELLLTQKLDFESIQTYTLNVQATD 325
>gi|350403960|ref|XP_003486964.1| PREDICTED: protocadherin Fat 3-like [Bombus impatiens]
Length = 1968
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 79/178 (44%), Gaps = 30/178 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI GND FA+ + KSGV+ V +DRE++ +Y L+I A D
Sbjct: 636 VSYSIVSGNDLRQFAIGD------------KSGVITVIR-KLDREDLTRYQLLIKAEDSG 682
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G+ T V + V D ND +P F Y F V + +K IG V A DA
Sbjct: 683 GLFNTAT-VNIKVTDINDKNPEFVDLPYEFTVKE---------GEARKL--IGRVHAEDA 730
Query: 148 D-GDKVAYKLAVPSNLVVIV-PQTGELL--LTGDPPSDDVEYELTVEAHDLQSPSRYA 201
D G P ++ V P+TG++L + D +D EY+ V A D R A
Sbjct: 731 DEGINAEITYFAPDDIPFTVDPETGDVLTKIVLDYEQND-EYKFVVTARDGAPDYRLA 787
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 15/122 (12%)
Query: 76 QYSLVITATDVKGINKAETHVTVDVL-DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWK 134
Q+S+ + ATD KG ++T V V+V+ N SPVF Q VY V + +S+NS V+
Sbjct: 570 QFSITVQATD-KGGKYSQTIVEVNVIPGPNTRSPVFQQPVYEVQVSE-GASINSTVA--- 624
Query: 135 KFSSIGSVSATDADGDKVAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EYELTVEA 191
+++A D + D V+Y + ++L I ++G + + +D+ Y+L ++A
Sbjct: 625 ------TITAVDPENDPVSYSIVSGNDLRQFAIGDKSGVITVIRKLDREDLTRYQLLIKA 678
Query: 192 HD 193
D
Sbjct: 679 ED 680
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 23/128 (17%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
I V +SH H ++ I GN+ F N TE ++ L + G +D E
Sbjct: 1067 ITVINSHAHDTTPLKCEIYSGNEKELFE---------ANVTEERNCALRLRKGVLDYETT 1117
Query: 75 AQYSLVITATDVKGI---NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
Y + + + G+ ++ T V + VLD NDN P FI D ++ L S
Sbjct: 1118 ESYQVKLKLESLSGLLNTDRNTTMVKIQVLDVNDNKP-------EFIFADSRAKL----S 1166
Query: 132 HWKKFSSI 139
+ F++I
Sbjct: 1167 RGRYFAAI 1174
>gi|167516998|ref|XP_001742840.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779464|gb|EDQ93078.1| predicted protein [Monosiga brevicollis MX1]
Length = 7042
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 79/176 (44%), Gaps = 33/176 (18%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+VRY++T ++ F +P T + T +DRE ++ V+ A D
Sbjct: 4574 VVRYALTAADNCTAFFTVDPVTGVLETVTR------------LDRERQETFTCVVLAAD- 4620
Query: 87 KGINKAETHVTVD--VLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
+G + TVD VLD NDN P F Q Y F V +L +F+ SVSA
Sbjct: 4621 QGSPSLSSTTTVDIVVLDRNDNEPSFEQTAYAFDVAEL---------FLGQFA---SVSA 4668
Query: 145 TDAD---GDKVAYKLAVPSNLVVIVPQTGELL--LTGDPPSDDVEYELTVEAHDLQ 195
TDAD +++ L PS I P +G L + D + ++ YELT+ D Q
Sbjct: 4669 TDADTPANTNISFGLLEPSAAFGIDPLSGSLFTKIALDRETREM-YELTLTVSDGQ 4723
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 88/194 (45%), Gaps = 24/194 (12%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG-INKAE 93
+D T+ + + NST + L T +D E++ Y+L + A D G + A
Sbjct: 5706 ASDTLTYTVSGAPGVVVINSTSGQ----LSTEAGLDYEQMQSYTLTVVAEDQGGLVGTAL 5761
Query: 94 THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GD 150
+VTV LD NDN P F+ Y V + ++ N+ ++ F ATDAD G+
Sbjct: 5762 VYVTV--LDVNDNHPQFASSAYAGAVPE-NAAANTAIAMSSVF------EATDADLEVGN 5812
Query: 151 KVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE--YELTVEAHDLQSPSRYAREPAQVW 208
V+Y L S L I +TG +L T P +V+ Y L V A D SP + A V
Sbjct: 5813 VVSYALENSSALFRIEAETG-ILYTTAPLDAEVQRVYSLWVRAIDNGSPPLSSALVAVVI 5871
Query: 209 ----LQFNSPVLQD 218
L NSPV D
Sbjct: 5872 NVTDLNDNSPVFMD 5885
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 72/157 (45%), Gaps = 26/157 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+ S +DRE VA ATD G ++ VTV VLDENDN+P F Q V
Sbjct: 3364 ITMSDSLDREVVATVVFRAVATDSLG-RTSQVTVTVTVLDENDNAPTFPQAV-------- 3414
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGELLLTGDPP 179
+NS V S+G V+ATDAD ++ Y + P+ + TG L+TG P
Sbjct: 3415 ---VNSTVREGDTLPSLGYVTATDADSGVNGQLTYSILSPTYGFTVDASTG--LVTGTVP 3469
Query: 180 SDDVEYE------LTVEAHDLQSPSRYAREPAQVWLQ 210
D +E LT+ A D SP+ + V +Q
Sbjct: 3470 LD---FETRPHLTLTIVATDGGSPALSSSVLVNVQVQ 3503
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 81/179 (45%), Gaps = 34/179 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS GT + LP ++ H + YS++ + FAL + T + S V
Sbjct: 574 ENSSVGTSLAMLP----ATDADLHAALVYSLSSSSQ---FALDSLTANL-------TSLV 619
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+ D D ++ SL +TA+D G + VTV +LD NDN+PVF Q Y+ V +
Sbjct: 620 VF----DADPVALSPISLQMTASD--GTFSSSAAVTVVILDVNDNAPVFDQVQYQVTVPE 673
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNLVVIVPQTGELLLTG 176
++ + + V ATDAD ++ Y L +++V + TG + L G
Sbjct: 674 STAT----------GTQLARVQATDADRALVNRQLKYTLLNATDIVRVAASTGAITLIG 722
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTV--DVLDENDNSPVFSQKVY 115
SG LL+ G++DRE +A + ++I A D G + T++T+ +V D NDN+PVF Q VY
Sbjct: 4895 ASGQLLLI-GELDREALAAFEIMIMAID-AGTPQLSTNITIMINVEDVNDNAPVFEQLVY 4952
Query: 116 RF 117
+
Sbjct: 4953 EY 4954
Score = 43.9 bits (102), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 43/72 (59%), Gaps = 4/72 (5%)
Query: 46 PTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDE 103
PT H ++ SGVL++ +D E V Q LVI A D N +A ++T+ +L+
Sbjct: 5613 PTEHADAFGLQATSGVLVLRDA-LDYEAVQQVDLVIEAYDTTA-NPLRATLNLTIHILNV 5670
Query: 104 NDNSPVFSQKVY 115
NDN+PVFS+++Y
Sbjct: 5671 NDNAPVFSRQLY 5682
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 36/169 (21%)
Query: 43 LKNPTTHEIRNS----TESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTV 98
L TT+ + ++ S SG L++ + +DRE + + ++ATDV G N A V +
Sbjct: 4976 LNETTTYAVEDNNYLGVNSSSGELILLAA-LDRESFVELFVQVSATDVVG-NNATARVEL 5033
Query: 99 DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-----GDKVA 153
+ D NDN+PVF DL +S ++++S + ++ SVSATDAD +
Sbjct: 5034 TITDVNDNAPVF----------DL-TSYSTSISEGQT-GALLSVSATDADEGLAGTAGIR 5081
Query: 154 YKLA-VPSNLVVIVPQT-GELLLTGDPPSDDVEYE------LTVEAHDL 194
++L P+NL + V T G + LT ++YE VEA++L
Sbjct: 5082 FRLVDNPNNLSLTVDATSGLITLTA-----AIDYEVLPNATFVVEAYNL 5125
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 51/119 (42%), Gaps = 14/119 (11%)
Query: 33 TQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK---GI 89
T N F L N + SG L+ +DRE + +Y+L + D G
Sbjct: 3850 TGANAALRFELWNCAPATLMTCPFGFSGQQLLLIAPVDRETIDRYNLTVAVLDAAADAGP 3909
Query: 90 NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
VTV + D NDNSP+F Q VY F +V+ IG+V+ATDAD
Sbjct: 3910 LNDTASVTVVIGDVNDNSPIFVQGVYNF-----------SVAENTAPGVIGNVAATDAD 3957
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 16/145 (11%)
Query: 57 SKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVT-VDVLDENDNSPVFSQKVY 115
S SG+L + S +D E ++ +S+ +T TD+ + T + V VLD NDNSPVF +
Sbjct: 1119 SVSGILTLDSA-LDFESLSSFSVNVTVTDMGSPALSTTAILQVMVLDVNDNSPVFPNQT- 1176
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVVIVPQTGELLL 174
L +++ N + FS ATDAD GD A A+ ++ + +G L
Sbjct: 1177 ------LSETVDENTAGSIAFS-----GATDADAGDNGAVTYALVNDFGGLFSLSGTSLT 1225
Query: 175 TGDPPSD-DVEYELTVEAHDLQSPS 198
++ EY + V A D +P+
Sbjct: 1226 HAQLDAEVATEYSVVVRATDGGTPA 1250
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 63/139 (45%), Gaps = 18/139 (12%)
Query: 69 IDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+DRE+VA Y +++T D N A+ + V V D NDN P F ++ ++ S
Sbjct: 1853 LDREQVASYDVLVTVYDQPAAPRNSAQFRLVVTVTDVNDNVPAFDSS---YLAVNVTESS 1909
Query: 127 NSNVSHWKKFSSIGSVSATDADGD-KVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDV-- 183
NS + +G ATD D D + Y L V +V TG LLL DP +
Sbjct: 1910 NS-------ITVLGPYLATDPDVDNAIVYNL-VQDGVVATRNATGHLLL--DPLDRETVS 1959
Query: 184 EYELTVEAHDLQSPSRYAR 202
+ LT+ A + P+ R
Sbjct: 1960 AFNLTLVAFNPDKPASQGR 1978
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 104/244 (42%), Gaps = 40/244 (16%)
Query: 69 IDREEVAQ-YSLVITATDVK--GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+DRE LVIT D +N + + V V+++D +DN+PVF+ Y F + +
Sbjct: 2056 LDREAFPNGIDLVITVQDAGTPSLNSSAS-VHVNIIDVSDNAPVFANNTYTFSLPE---- 2110
Query: 126 LNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDD 182
+ S +G V+AT +D VAY ++ P+ I TG + P+
Sbjct: 2111 -----GTYATSSVVGQVTATSSDSGANADVAYSVS-PTTRFRINASTG---VISTQPNMT 2161
Query: 183 VEYELTVEAHDLQSPSRYARE----PAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKR 238
+ E T+ +H L + E AQV + + D + M AP +
Sbjct: 2162 FDRE-TIASHTLTVSAVSGPENKPLVAQVAVTVAIADINDNTPVLM-----AAPASLTLS 2215
Query: 239 RVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKR 298
T + ++ D + + ++L+ +T +F I +ENG++++++
Sbjct: 2216 EATAVGTTLHTFEATDADAGVNAALTWSLQ-DTNNGRFSI---------NENGELKLERA 2265
Query: 299 WDFE 302
+DFE
Sbjct: 2266 FDFE 2269
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 45/85 (52%), Gaps = 19/85 (22%)
Query: 68 DIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
++DRE A Y++++ +D G E V V VLD+NDN P+F VG S+L+
Sbjct: 5209 NLDRETRAAYAIIVGCSD--GSFTVEKTVQVSVLDQNDNEPLF--------VGTTPSNLS 5258
Query: 128 SNVSHWKKFSSIGSV----SATDAD 148
+ ++IG V +ATDAD
Sbjct: 5259 -----LSEGAAIGDVFYTFAATDAD 5278
>gi|432879584|ref|XP_004073499.1| PREDICTED: uncharacterized protein LOC101171842 [Oryzias latipes]
Length = 8377
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 107/225 (47%), Gaps = 45/225 (20%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVG 120
LV +DRE+ A++ L++TA D K+ T +VTV VLD NDNSP+F+Q++Y I+
Sbjct: 2953 FLVLQKPLDREKHAEHKLILTAVDGGSPPKSGTLNVTVTVLDTNDNSPIFTQEIYSAII- 3011
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSN-----LVVIVPQTGEL 172
N N+ K S++ +V+ATD D V Y + + I +GE+
Sbjct: 3012 ------NENI---KVGSNVITVNATDLDEGVNADVEYSFGGELDPQIYEIFSINKHSGEI 3062
Query: 173 LLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQ-LLQMIDRKSE 230
+ G+ + E Y+L V A D P P+ D + +++++D+
Sbjct: 3063 SVKGEIDFEKAEVYKLDVHASDKGQP----------------PMNADCRVIIKVLDQNDN 3106
Query: 231 APHRIEKRRVTRAVRPTKR-------IDFSETDGEMEGRIVFALE 268
P IE ++++V + I ++ D + G+++ +L+
Sbjct: 3107 LPE-IEVTSLSKSVSEDSKPGTVVSLISITDRDSGLNGKVICSLQ 3150
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 89/178 (50%), Gaps = 21/178 (11%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET 94
N T+ L +I S E K+ LL+ +DRE+ ++ L +TA D + T
Sbjct: 6222 ANSIRTYTLTPNEHFDIEISEEEKNPFLLLKKS-LDREQKNKHVLFVTAVDGGRPQRTGT 6280
Query: 95 -HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GD 150
+VTV VLD NDN P+FSQ++Y+ + + N++V +S+ V+ATD D
Sbjct: 6281 LNVTVLVLDTNDNRPIFSQEIYQVEIRE-----NASVG-----TSVARVNATDPDQGSNG 6330
Query: 151 KVAYKLA--VPSNLVVIVP---QTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAR 202
+V Y L+ +P + I +GE+ L GD ++ E Y+L ++A D P R
Sbjct: 6331 EVEYSLSKMLPRKVYDIFDLDISSGEIKLKGDLDFEESETYKLDIQASDKGQPPLIGR 6388
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 84/179 (46%), Gaps = 32/179 (17%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
RY ++Q N F+L +IRNS + K LV +DRE+ A + L++TA D
Sbjct: 3873 RYKLSQ---NDHFSL------DIRNSGDDKIP-FLVLQKQLDREKKANHILILTAVDGGT 3922
Query: 89 INK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+K A+ ++TV VLD NDN PVFS+ Y L N K I V ATD
Sbjct: 3923 PSKSAQLNLTVKVLDINDNRPVFSKDTYSV-------QLQENALLDKI---ILKVQATDP 3972
Query: 148 D----GDKVAYKLA---VPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSP 197
D GD V Y L I TGE+ + G D + DV Y+L V+A D P
Sbjct: 3973 DEGPNGD-VEYAFGDDMTSIALFAIDRNTGEIRVKGHIDYETADV-YKLDVQASDKGQP 4029
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVT-VDVLDENDNSPVFSQKVYRFIVGD 121
L+T +D+E YS+ ITA D+ + T V VDV D NDNSPVF Q Y F V +
Sbjct: 1719 LITKDYLDKETSEVYSVTITAQDLGYPVLSSTKVIKVDVKDVNDNSPVFPQTPYTFYVNE 1778
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG 149
+NV+ SI SVSA+D DG
Sbjct: 1779 ------NNVAGM----SIFSVSASDKDG 1796
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 76/157 (48%), Gaps = 26/157 (16%)
Query: 50 EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSP 108
E+++ E++ LV +DRE ++ L +TA D K + + VDVLD NDNSP
Sbjct: 7742 EVKDRGENRKVPFLVLQKQLDRETSEKHKLRLTAVDGGKPVKSGNIDIIVDVLDVNDNSP 7801
Query: 109 VFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-----------GDKVAYKLA 157
VF+++ Y +++ N+ F + V+ATD D G++V K
Sbjct: 7802 VFTKETY-------SATIRENIP-IDTF--VIQVNATDLDKGANAEIVYSFGNEVNQK-- 7849
Query: 158 VPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
S L I +TGE+ + G + + YE+ V+A D
Sbjct: 7850 -TSELFSINEKTGEITVKGQIDFEKSKSYEIDVQASD 7885
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 50 EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSP 108
E+++ E LV +DRE ++ L +TA D K + + VDVLD NDNSP
Sbjct: 5456 EVKDRGEDGKVPFLVLQKQLDRETAEKHKLRLTAVDGGKPVKSGNIDIIVDVLDVNDNSP 5515
Query: 109 VFSQKVY 115
VF+++ Y
Sbjct: 5516 VFTKETY 5522
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 45/238 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIVG 120
LV +DRE V+ Y ++ITATD G T V++DV D NDN P F+Q +
Sbjct: 3168 LVVKQPLDRESVSHYDILITATDC-GQPTLSTFKTVSIDVADVNDNKPEFTQNPVELYLT 3226
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAV---------PSNLVVIVPQTGE 171
+ + N I SVSA D D ++ A V + + I P+TGE
Sbjct: 3227 ENNTPGN----------VICSVSALDKDLNENAILTYVVRGDTGQLISAAFLNINPETGE 3276
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSPVL-------QDEQ 220
+ + V+ ++ V A D SP + V++ N+PV+ +
Sbjct: 3277 ISALKSFDFESVKTFQFHVVATDSGSPPLSSNVTVNVFILDQNDNAPVILYPVSSNGSAE 3336
Query: 221 LLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKI 278
++ I R A H + K R A D G ++F+L++ T+ F +
Sbjct: 3337 GVEEIPRNVNAGHLVTKVRAYDA------------DIGYNGWLLFSLQQVTDHSLFAL 3382
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
LVT G +DRE V+ Y + I A+D K A + V V D NDN+PVFSQ F
Sbjct: 2402 LVTKGRLDRESVSYYDITIIASDCGKPQLSAIKTLRVQVSDVNDNTPVFSQNPLEF 2457
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 14/94 (14%)
Query: 58 KSGVLLVTSGDI-DREEVAQYSLVITATDVK--GINKAETHVTVDVLDENDNSPVFSQKV 114
K + VT+ DI DRE+V Y +++ ATD ++ +T ++++ D NDNSP FS
Sbjct: 4889 KENIYSVTTKDILDREKVPHYEIIVKATDCGDPSLSSFKTF-SIELSDVNDNSPQFSHNP 4947
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
F + L +NV+ F SVSATD D
Sbjct: 4948 LYFYL------LENNVAGTLLF----SVSATDMD 4971
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 50 EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSP 108
+IR S + K LV +DRE Y+ V+TA D K +V + VLD NDN P
Sbjct: 4669 DIRQSDDDKIP-FLVLKKSLDRELKHNYAFVVTAVDGGKPARSGTLNVGIFVLDSNDNRP 4727
Query: 109 VFSQKVY 115
VF+Q+ Y
Sbjct: 4728 VFTQESY 4734
Score = 38.1 bits (87), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRF 117
++T +DREE ++Y + ITA D + +E ++V V D NDN P FS Y F
Sbjct: 7180 VLTKSQLDREETSRYDITITAKDAGEPSLTSEKTISVYVSDTNDNKPEFSLNPYTF 7235
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+ +DRE+ A ++L +TA D K V V VLD NDN P F + +Y + +
Sbjct: 369 LILKKTLDREQQAVHNLTLTAVDGGKPARSGTASVIVHVLDTNDNKPTFDKSLYNVKIME 428
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
S + S V H ++ATD+D
Sbjct: 429 -NSPIGSLVLH---------LNATDSD 445
>gi|402872799|ref|XP_003900289.1| PREDICTED: protocadherin beta-5 [Papio anubis]
Length = 795
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/147 (36%), Positives = 69/147 (46%), Gaps = 22/147 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 402 LVTQRTLDREIQAEYNITITVTDLGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D V Y L P ++LV I G
Sbjct: 462 ----NNSPALH------IGSVSATDRDSGTNALVTYSLLPPQDPHLPLASLVSINTDNGH 511
Query: 172 LLLTGDPPSDDV-EYELTVEAHDLQSP 197
L + + E+E V A D SP
Sbjct: 512 LFALRSLDYEALQEFEFRVGATDRGSP 538
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + L +TA D ++ T V + VLD NDN+P F + +Y V +
Sbjct: 194 LVLDKALDREERPELGLTLTALDGGAPPRSGTTTVRIVVLDNNDNAPEFLKSLYEVQVPE 253
Query: 122 LKSSLNSNVSHWKK----FSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLL 174
S LNS V + GSV+ T GD+V VI +TGE+ L
Sbjct: 254 -NSPLNSLVVAVSARDLDAGAYGSVAYTLFQGDEVTQPF-------VIDEKTGEIRL 302
>gi|296193014|ref|XP_002744360.1| PREDICTED: protocadherin gamma-B2 [Callithrix jacchus]
Length = 822
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 58/117 (49%), Gaps = 12/117 (10%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+E++K GT P L S P+ L RY + NDN F L T + R E
Sbjct: 143 VESTKPGTTFPLDPAL--DSDVGPNSLQRYHL---NDNEYFDLAEKQTPDGRKYPE---- 193
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYR 116
L+ +DREE + LV+TA D ++ +T + + V D NDN PVFSQ VYR
Sbjct: 194 --LILKHSLDREEHIFHQLVLTALDGGDPPQSGKTQILIQVTDANDNPPVFSQDVYR 248
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 22/156 (14%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQK 113
+ SK+ LVT G +DREE +Y+L ITATD K + T+ + D NDN+PVF Q
Sbjct: 396 SSSKNYYKLVTDGALDREETPEYNLTITATDGGKPPLSSSIIFTLHISDINDNAPVFQQN 455
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV----PSNL---V 163
Y V + + +S+ +SA+D D +V+Y + P L +
Sbjct: 456 SYMVHVAE----------NNPPGASVAQISASDPDLGPNGQVSYSIVASDLEPQELLSYL 505
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
+ QTG + + + +E+T++A D SP+
Sbjct: 506 SVSAQTGVVFAQRGFDHEHLRAFEVTLQARDQGSPA 541
>gi|194901912|ref|XP_001980495.1| GG17179 [Drosophila erecta]
gi|190652198|gb|EDV49453.1| GG17179 [Drosophila erecta]
Length = 1879
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 101/258 (39%), Gaps = 65/258 (25%)
Query: 3 NSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL 62
N SG VK I AS KH + Y + GN++ F + T
Sbjct: 1347 NENSGRDVKIGHIQAASRSKHNRDIFYYMLL-GNEDGAFYVDKLTGD------------- 1392
Query: 63 LVTSGDIDREEVAQYSLVITAT---------------DVKGINKAET--HVTVDVLDEND 105
+ T+ +DREE Y+L I A+ +K +N+ T V + VLD ND
Sbjct: 1393 IYTNKSLDREETDVYTLYILASIKADLHISEEERASFSIKTLNRDNTVAKVAITVLDVND 1452
Query: 106 NSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA-----------Y 154
N PVF + Y + +N+N K SI V+ATDAD K A Y
Sbjct: 1453 NPPVFEKPTYY-------AGVNANA---KMGVSIRLVNATDADQGKNAKIEFMIVASNLY 1502
Query: 155 KLAVPSNLVVIVPQTGELLLTGDPPSDDV-------EYELTVEAHDLQSPSRYAREPAQV 207
K + IVP + G ++ + +EL + A +L+ P R A +
Sbjct: 1503 KFGATKSTGSIVPSPFAISQDGRISANTIMAEYNQDRFELEIVARELEQPQRSASTKVNI 1562
Query: 208 WLQFNSPVLQDEQLLQMI 225
W V QL+++I
Sbjct: 1563 W------VFDGTQLVRVI 1574
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 75/152 (49%), Gaps = 19/152 (12%)
Query: 54 STESKSG-VLLVTSGDIDREEVAQYSLVITATDVK--GINKAETH-VTVDVLDENDNSPV 109
S ++ +G V++ S +DRE++ + +L + A D + K+ T + +++LD NDN PV
Sbjct: 1151 SIDAYTGNVMVANSTILDREQIKELTLSVVAQDKAPAAVQKSATATIHINILDVNDNVPV 1210
Query: 110 FSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPS--NLV 163
F++ VY S++ N + ++ +++ V A D D GD V Y + + L
Sbjct: 1211 FTRDVY-------NSTVAENAA-YQPPAALLQVQAIDQDEGLYGD-VRYIITAGNEMGLF 1261
Query: 164 VIVPQTGELLLTGDPPSDDVEYELTVEAHDLQ 195
+ Q+G + YELT+ A D Q
Sbjct: 1262 KLDAQSGIVYPAQSLSGKHGAYELTISARDTQ 1293
>gi|327270415|ref|XP_003219985.1| PREDICTED: protocadherin gamma-A6-like [Anolis carolinensis]
Length = 793
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 61/123 (49%), Gaps = 18/123 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + Y L++TATD + A T + + VLD NDN PVFS VY V +
Sbjct: 175 LVLEKPLDREEQSVYDLILTATDGGDSVKSAMTEIHIVVLDANDNVPVFSHSVYEVNVKE 234
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL----AVPSNLVVIVPQTGELLL 174
NV W S + ++ ATD D ++ Y S L ++ TGE++L
Sbjct: 235 -------NVPKW---SIVTTIRATDLDEGINGEIKYFFEDITKRVSQLFLLNSTTGEIIL 284
Query: 175 TGD 177
G+
Sbjct: 285 VGN 287
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 13/93 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +DREEV Y++ +TA D +G+ T +++ VLD NDN P F + Y V
Sbjct: 385 LVTEKSLDREEVTIYNITVTAID-EGMPTLSTSEIISLKVLDTNDNPPAFIKSTYTSYV- 442
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA 153
L +N + SSI S+ A+D D +K A
Sbjct: 443 -----LENN----PRGSSIFSLKASDPDSEKNA 466
>gi|301629645|ref|XP_002943948.1| PREDICTED: protocadherin-16-like, partial [Xenopus (Silurana)
tropicalis]
Length = 1933
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/130 (35%), Positives = 61/130 (46%), Gaps = 14/130 (10%)
Query: 46 PTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDEND 105
P + S E+ SG L V G +DRE Y L + A+ G A V V V DEND
Sbjct: 176 PDADAVGFSIEADSGWLYV-RGALDRESREAYVLAVLASAGPGTRTATCTVRVRVTDEND 234
Query: 106 NSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNL 162
NSP S++ RF + S + ++G VSATD D +V+Y+L +
Sbjct: 235 NSPRLSEE--RFFL--------SATENRPPGETVGRVSATDRDAGPNGRVSYRLPPLESD 284
Query: 163 VVIVPQTGEL 172
I P TGEL
Sbjct: 285 FHINPHTGEL 294
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 53/108 (49%), Gaps = 15/108 (13%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L +L S + LV YSIT G+++ F + N T IR +
Sbjct: 1249 GSEVLRVLAQDSDSGSNGLVHYSITSGDESRLFQI-NEATGAIRLARH------------ 1295
Query: 69 IDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKV 114
+DRE A ++LV+ A D +G N A VT++V D NDN P F ++
Sbjct: 1296 LDRERQALHALVVLALDGQGGQANFALVPVTIEVRDINDNKPYFPVQI 1343
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 68/138 (49%), Gaps = 22/138 (15%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D E+ YSL + +D K + AE +T+ + D NDNSP F + +Y+ S
Sbjct: 973 LDYEDRKSYSLTVQTSDGKHLTHAE--LTLTLQDVNDNSPEFGKSLYQV----------S 1020
Query: 129 NVSHWKKFSSIGSVSATDAD-GD--KVAYKLAVP-SNLVVIVPQTGEL----LLTGDPPS 180
+ H + + +V ATD D GD +V+Y++ P I P G L L+ DP S
Sbjct: 1021 ILEHAAAGTPLFTVRATDRDSGDNGRVSYRVLSPVGGAFHIHPDNGTLFANKLVELDPQS 1080
Query: 181 DDVEYELTVEAHDLQSPS 198
V ++ VEA D SPS
Sbjct: 1081 PLV--DVLVEARDHGSPS 1096
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+I GN ++ F ++ + N + G +++T +D E ++ Y+L + A+D +G+
Sbjct: 1155 YTILSGNTDNAFQVQ--SGMRFWNGRFQQIGSIILTD-SLDFEAISFYNLTLGASD-RGV 1210
Query: 90 NKAETH---VTVDVLDENDNSPVFSQKVYRFIVGD 121
+ +H V ++VLD NDN PVF + +Y ++ +
Sbjct: 1211 PQ-RSHSVPVLINVLDINDNPPVFPRPLYSVLLSE 1244
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 24/115 (20%)
Query: 18 ASSH--KHPHQLVRYSITQ---GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
AS H P+ VRYS+ + G+ TF L ++++GVL V +DRE
Sbjct: 493 ASDHDGPGPNSQVRYSLLRQDPGSPGSTFRL------------DAETGVLYVAQA-LDRE 539
Query: 73 EVAQYSLVITATDVKGINKAE---THVTVDVL--DENDNSPVFSQKVYRFIVGDL 122
EV+ Y LV+ A+D + +N ++ T VT V D ND++P F + ++ DL
Sbjct: 540 EVSSYLLVVEASD-QAVNVSQQRSTSVTARVFISDRNDHAPQFITPLVVWLPEDL 593
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 14/123 (11%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVF-----SQKVYRFIVGDL 122
+DRE A Y L++ A D ++ T V + VLDENDN+P F +++ ++
Sbjct: 300 LDRELQATYQLLVIAQDGGAPPRSVTGTVHITVLDENDNAPTFLHPNAGKEISLQVIPAS 359
Query: 123 KSSLNSNVSH--------WKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLL 174
+ SN S S +GS++ G ++ L P + ++ QTG + L
Sbjct: 360 RYPSKSNPSSLVLSPMEGLAPGSLLGSLAPRMPHGSRIYTLLDEPHGIFMVDGQTGSIFL 419
Query: 175 TGD 177
G+
Sbjct: 420 VGE 422
>gi|194219789|ref|XP_001917793.1| PREDICTED: protocadherin gamma-B7-like [Equus caballus]
Length = 836
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 22/159 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE+ +Y++ ITATD K + T +T+ V D NDN+PVF Q Y V +
Sbjct: 404 LVTDGALDREQTPEYNVTITATDRGKPPLSSSTTITLHVTDVNDNAPVFRQSAYLVHVPE 463
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVP-------SNLVVIVPQTGE 171
+ +SI VSA+D D +V+Y + S+ V + Q+G
Sbjct: 464 ----------NNPPGASIAQVSASDPDLGPNGRVSYSIVASDLEPRALSSYVSVSAQSGV 513
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL 209
+ + + +ELT++A D SP+ A +V +
Sbjct: 514 VFAQRSFDHEQLRAFELTLQARDQGSPALSANASLRVLV 552
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE + + LV+TA D + T + + V+D NDN PVFSQ VYR
Sbjct: 194 LVLKKTLDRETQSTHHLVLTALDSGEPPRSGTTQIRILVVDANDNPPVFSQDVYRV---- 249
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYK-LAVPSN---LVVIVPQTGELLL 174
SL +V SS+ VSATD D ++ Y L V N + + P TG ++
Sbjct: 250 ---SLPEDVPPG---SSVLKVSATDQDEGFNAEITYSFLGVTDNAQHVFSLDPATGNIIT 303
Query: 175 TGDPPSDDVE-YELTVEAHD 193
++VE Y + VEA D
Sbjct: 304 HQPLDFEEVERYTMGVEAKD 323
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 16/83 (19%)
Query: 28 VRYSITQGNDN--HTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
+ YS DN H F+L +P T I +T +D EEV +Y++ + A D
Sbjct: 277 ITYSFLGVTDNAQHVFSL-DPATGNI------------ITHQPLDFEEVERYTMGVEAKD 323
Query: 86 VKGINKAETHVTVDVLDENDNSP 108
+G + V ++VLDENDN P
Sbjct: 324 -RGSLSTQCKVIIEVLDENDNLP 345
>gi|156523124|ref|NP_001095976.1| protocadherin alpha-13 precursor [Bos taurus]
gi|154757543|gb|AAI51665.1| PCDHA13 protein [Bos taurus]
Length = 950
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 20/156 (12%)
Query: 48 THEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDN 106
T + +NS E S + LV +DREE+ ++SL++TA+D T + + +LD NDN
Sbjct: 179 TLDTQNSREQMSSLSLVLRKSLDREEIQEHSLLLTASDGGKPELTSTVQLLITILDVNDN 238
Query: 107 SPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVV-- 164
+P F Q +Y+ V L++SLN ++ K ++ T+AD + Y P + +
Sbjct: 239 APEFDQLIYK--VRMLENSLNGSL--VIKLNATDPDDGTNAD---ITYSFRRPVSPAILY 291
Query: 165 ---IVPQTGELLLTGDPPSDDVE----YELTVEAHD 193
I P +GE+ G D E YE++VEA D
Sbjct: 292 AFYINPDSGEIRTKG---KLDFEENKLYEISVEAID 324
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 84/199 (42%), Gaps = 36/199 (18%)
Query: 69 IDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE + Y +V+TA D + A V+V+V D NDN+P F Q Y V + N
Sbjct: 413 LDRESASNYEVVVTARDGGSPSLSATASVSVEVADVNDNAPAFPQPEYTVFVKE----NN 468
Query: 128 SNVSHWKKFSSIGSVSATDADGDK---VAYKLA-------VPSNLVVIVPQTGELLLTGD 177
H I +VSA DAD + V+Y L S+ V + ++G++
Sbjct: 469 PPGCH------IFTVSARDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYALQ- 521
Query: 178 PPSDDVEYELT---VEAHDLQSPSRYAREPAQVWL---QFNSPVL-------QDEQLLQM 224
P D E EL V A D P + QV++ N+P L + Q+
Sbjct: 522 -PLDHEELELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLPPGPSGGPSAVSQV 580
Query: 225 IDRKSEAPHRIEKRRVTRA 243
+ R +A H + K R A
Sbjct: 581 VSRSVDAGHVVAKVRAVDA 599
>gi|126330664|ref|XP_001369066.1| PREDICTED: protocadherin Fat 4 [Monodelphis domestica]
Length = 4980
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 38/183 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YS+ +GN+ FA+ + T + +G +D E + YSL+I A D
Sbjct: 1243 IHYSVVKGNEEKMFAIDSATGQ-------------VSLAGQLDHEATSSYSLLIQAVDSG 1289
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVSAT 145
++ T +++D+LDENDN+P F KS+L +V + + SV+AT
Sbjct: 1290 AVSLNSTCTLSIDILDENDNTPSFP-----------KSTLFVDVLENMRIGELVTSVTAT 1338
Query: 146 DAD-GDK--VAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQS 196
D+D GD + Y + +N I P TG + L D E Y+L + A D
Sbjct: 1339 DSDSGDNADIHYSITGTNNHGTFSISPNTGGIFLA---KKLDFETQPLYKLNITAKDQGR 1395
Query: 197 PSR 199
P R
Sbjct: 1396 PPR 1398
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 126/318 (39%), Gaps = 64/318 (20%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y I GN+ F L N + + + LV+ G +DRE AQY L++ D KG
Sbjct: 174 YRIVGGNEAGRFRLD-----ITLNPSGEGAFLHLVSKGGLDREATAQYQLLVEVED-KGE 227
Query: 90 NKAETH--VTVDVLDENDNSPVFSQKVYR------FIVGDLKSSLNSNVSHWKKFSSIGS 141
K + V V V D NDN PVF Y+ +VG SS+
Sbjct: 228 PKRRGYLQVNVTVQDINDNPPVFRSSHYQAGVPEDAVVG----------------SSVLQ 271
Query: 142 VSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQ 195
V+A DAD + Y+L + P+TG L+T P D +Y LT++AHD
Sbjct: 272 VTAADADEGTNADIRYQLQEDGGPFHMDPETG--LITVREPLDYEARRQYSLTLQAHDRG 329
Query: 196 SPSRYAREPAQVWL---QFNSPVLQDEQL-----LQMIDRKSEAPHRIEKRRVTRAVRPT 247
PS R A + L N PV++ +D ++ + VT A P
Sbjct: 330 VPSLTGRAEALIQLLDVNDNDPVVKFRYFPATSRFASVDENAQVGTVVALLTVTDADSPA 389
Query: 248 KRIDFSETDGEMEGRIVFALEKETEREKFKI-RDENPWITVDENGDVRVKKRWDFEELGP 306
G I + E+ F++ R + P +++ ++V D E + P
Sbjct: 390 AN-----------GNISVQILGGNEQRHFEVQRSKVPNLSL-----IKVASALDRERI-P 432
Query: 307 EKTIDFWVTINNQATNGG 324
+ V+ N+ AT G
Sbjct: 433 SYNLTVSVSDNHGATPGA 450
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 16/91 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + YSI GN ++F++ + +T EI++ +DRE+V+QY L + A
Sbjct: 2699 PNGQLEYSIVNGNIENSFSIHH-STGEIKSIRS------------LDREKVSQYVLTVRA 2745
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQ 112
+D KG T VTV +VLDENDN+P FSQ
Sbjct: 2746 SD-KGTPSQSTTVTVIINVLDENDNAPRFSQ 2775
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKG--INKAETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ Y+L I ATD KG + T V V +LD NDN+P+F+Q +Y+
Sbjct: 2107 TGELDREEVSNYTLTIVATD-KGQPALSSSTEVAVIILDINDNNPIFAQALYK 2158
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 59/126 (46%), Gaps = 25/126 (19%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ V+YSI+ G D F + + T V + T +DREE Y L + A
Sbjct: 718 PNGTVKYSISAG-DTSGFQIHSHT-------------VAISTRMVLDREEKTAYQLQVVA 763
Query: 84 TDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
TD + + VT+ VLD DN PVFSQ Y F+V + NV+ +GSV
Sbjct: 764 TDGGHLQSPNQAIVTITVLDTQDNPPVFSQATYSFVVFE-------NVALGYH---VGSV 813
Query: 143 SATDAD 148
SA+ D
Sbjct: 814 SASTMD 819
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 29/190 (15%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+ Y I+ GN++ FA+ + +G L++ +D E ++ + I+ATD
Sbjct: 3123 LLTYHISSGNEDGLFAIN------------ASTGALILAK-PLDYELHQKHEMTISATDG 3169
Query: 87 KGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + + ++VLD NDNSPVF + Y V + + +++ ++AT
Sbjct: 3170 GWVARTSYCSIIINVLDVNDNSPVFVPEEYSPTV----------LENAPSGTTVMRLNAT 3219
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRY 200
DAD +AY L + S+L VI P +G + G + + Y LTV+A ++ R
Sbjct: 3220 DADSGSNAVIAYSLQSSDSDLFVIDPNSGIITTQGFLDYETKQSYHLTVKAFNVPDEERC 3279
Query: 201 AREPAQVWLQ 210
+ + L+
Sbjct: 3280 SFATVNIHLK 3289
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 61/151 (40%), Gaps = 29/151 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT G+ F + T H L TS IDREE + Y L + A+
Sbjct: 824 ITYVITTGDQKGVFTINQFTGH-------------LTTSSIIDREEQSFYQLKVVAS--G 868
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G+ ET V + V D NDN+P F Q V V V +W+ SI A D
Sbjct: 869 GLVTGETLVNITVKDLNDNAPHFLQAVEWVNV----------VENWQAGHSIFQAKALDP 918
Query: 148 D---GDKVAYKLAV-PSNLVVIVPQTGELLL 174
D V Y L P NL I + G + L
Sbjct: 919 DEGVNGMVLYSLKQNPKNLFTIDEKNGNISL 949
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 32/192 (16%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD---VKGIN 90
G D L T+ + S++G + V SG +DRE+ + SL + A + ++G +
Sbjct: 3327 MGTDGEVHYLIFGTSRKKGFQINSRTGQIYV-SGVLDREKEERISLKVLAKNSGSIRGAD 3385
Query: 91 KAETHVTVDVLDENDNSPVFSQKVYRFIVGD---------LKSSLNSN-VSHWKKFSS-I 139
E V + +LD ND PVFS ++Y + + S+ +S+ V +W +FS I
Sbjct: 3386 VDEVTVNITILDAND-PPVFSLEIYNVQISEGVPIGTHVTFVSAFDSDSVPNWSRFSYFI 3444
Query: 140 GSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
GS + A I PQTG++ +T + + + Y LTV A DL +PS
Sbjct: 3445 GSGNENGA---------------FSINPQTGQITVTAELDRETLPVYNLTVLAVDLGTPS 3489
Query: 199 RYAREPAQVWLQ 210
V L+
Sbjct: 3490 ATGSASLLVTLE 3501
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 58/115 (50%), Gaps = 16/115 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN+ +GT + + + A + + VRYS+ +GN+NH F + +S +G+
Sbjct: 2163 ENTLTGTDI--VQVYAADGDEGTNGQVRYSLLRGNENHEFRM------------DSVTGI 2208
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVY 115
L V +DRE+ A YSL + + D + + T V + +LD ND PVF Y
Sbjct: 2209 LSVAK-PLDREKKAAYSLTVQSVDRGSSPRMDTTTVEIILLDINDFVPVFELSPY 2262
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 57/111 (51%), Gaps = 16/111 (14%)
Query: 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS 66
G G + + + + + + LV Y+I G D+ +F + + +SG L+ T
Sbjct: 1752 GDGSRIMQLTAMDADEGANALVTYAIISGADD-SFHI------------DPESGELIATK 1798
Query: 67 GDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+DRE ++YSL++ A D G+ ++ + + + D ND+ P FS+ VY F
Sbjct: 1799 -RLDRERRSKYSLLVRADD--GLQSSDMRINITISDVNDHIPKFSRPVYSF 1846
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVF 110
L T +DREE A YSL++ A D+ ++ T V V +LD NDNSPVF
Sbjct: 639 LSTISSLDREEQAFYSLLVLAVDLGSPAQSSLTRVNVSLLDVNDNSPVF 687
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 74/166 (44%), Gaps = 30/166 (18%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L ++ + P+ + Y + GN+++ F L S SG L V +DRE
Sbjct: 2278 LQVVARDDDQGPNSKLTYMLIGGNEDNAFIL-------------SASGELKVIQ-SLDRE 2323
Query: 73 EVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDLKSSLNSNV 130
+ L+ITATD G TV+V+ D NDN P F+ K+Y + +
Sbjct: 2324 TKEKCILLITATD-SGSPALTGTGTVNVIVDDVNDNIPTFAHKMYSATISE--------- 2373
Query: 131 SHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELL 173
S + V+A+DAD ++Y+L ++ I P TG+++
Sbjct: 2374 -DAPTGSDVLLVNASDADASTNAVISYRLIGGNSQFTINPSTGQII 2418
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 119/290 (41%), Gaps = 51/290 (17%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
MEN G+ + L V + P+ + YSIT G+ F T K+G
Sbjct: 1952 MENLPLGSTI--LIFNVTDADDGPNSQLSYSITSGDSLGQF-------------TVDKNG 1996
Query: 61 VLLVTSGDIDREEVAQYSLVITATDV----KGINKAETHVTVDVLDENDNSPVFSQKVYR 116
VL V +DRE + Y+LVI D+ + V++ +LD NDN+P F
Sbjct: 1997 VLKVRQ-TLDRESQSFYNLVIQVHDMPLPSASSYTSTAQVSIILLDVNDNAPTFISPKLT 2055
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP-SNLVVIVPQTGEL 172
++ + + + + ATD D + Y L P N I GE+
Sbjct: 2056 YVPENTPTD-----------TVVFKAQATDRDSGPNSYIEYTLLNPLGNKFSIGTIDGEV 2104
Query: 173 LLTGDPPSDDVE-YELTVEAHDLQSPS-RYAREPAQVWLQF--NSPVLQDEQLLQMIDRK 228
LTG+ ++V Y LT+ A D P+ + E A + L N+P+
Sbjct: 2105 RLTGELDREEVSNYTLTIVATDKGQPALSSSTEVAVIILDINDNNPIF------------ 2152
Query: 229 SEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKI 278
++A +++E T ++ ++ D G++ ++L + E +F++
Sbjct: 2153 AQALYKVEIDENTLTGTDIVQVYAADGDEGTNGQVRYSLLRGNENHEFRM 2202
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 95/244 (38%), Gaps = 46/244 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
++ S ++RE+ +Y + ++A D T V + V D NDN+P F + Y +L
Sbjct: 2827 IIISRPLNREDTDRYRIRVSAHDSGW--TVSTDVAIFVTDVNDNAPRFKKPSYYLDCPEL 2884
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELL------ 173
+ + + VSATD D +V Y + S I TGE+
Sbjct: 2885 T----------EIGAKVAQVSATDPDEGSNGQVFYFIKSQSEFFRINATTGEIYNKQALK 2934
Query: 174 ---LTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSE 230
+TG + + V + D SPS + + ++D
Sbjct: 2935 YRNVTGSSNVNINRHSFIVTSSDRGSPSLLSETTVTI---------------NIVDSNDN 2979
Query: 231 APHRIEKRR---VTRAVR-PTKRIDFSETDGEMEG---RIVFALEKETEREKFKIRDENP 283
AP + + VT+ VR TK I + D + G + + + E+ EKFK+
Sbjct: 2980 APQFLNSKYFTPVTKNVRVGTKLIKVTAVDDKDFGANSEVEYFISNESPVEKFKLDSTTG 3039
Query: 284 WITV 287
WI+V
Sbjct: 3040 WISV 3043
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 16/89 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSG-VLLVTSGDIDREEVAQYSLVITATDV 86
+RYSI GN+ F + + SG V +G +DRE +Q L I+A D
Sbjct: 508 LRYSIISGNELDWFHISD------------HSGLVTTAAAGGLDRERASQVVLNISARD- 554
Query: 87 KGINKAETH--VTVDVLDENDNSPVFSQK 113
+G++ ++ + V VLD ND PVFSQ+
Sbjct: 555 QGVHPKVSYAQLVVTVLDVNDEKPVFSQE 583
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 26/153 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN++ GT V L + A S + + I GN+ F E++ S +
Sbjct: 369 ENAQVGTVVALLTVTDADS-PAANGNISVQILGGNEQRHF--------EVQRSKVPNLSL 419
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAE------THVTVDVLDENDNSPVFSQKVY 115
+ V S +DRE + Y+L ++ +D G + + V D ND+ PVFSQ VY
Sbjct: 420 IKVASA-LDRERIPSYNLTVSVSDNHGATPGAVARSSVASLVIFVNDINDHPPVFSQLVY 478
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
R + + S + VSATD D
Sbjct: 479 RVNLSE----------EAPPGSYVSGVSATDGD 501
Score = 37.7 bits (86), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 17/92 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
+ YSI +GN + F + G L V S ++DRE +Y LV+ A+D
Sbjct: 1029 IAYSIVEGNTGNAFGIF-------------PDGQLYVKS-ELDRELQDRYVLVVVASDRA 1074
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
V+ ++ A +VTV + D NDN P+F+ Y F
Sbjct: 1075 VEPLS-ATVNVTVVLEDVNDNRPLFNSTNYVF 1105
>gi|402872811|ref|XP_003919525.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-11 [Papio
anubis]
Length = 797
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 72/149 (48%), Gaps = 24/149 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
L T +DRE A+Y++ IT TD+ GI K E ++TV V D NDN+P F+Q Y V
Sbjct: 403 LETERPLDRESTAEYNITITVTDL-GIPRLKTEYNITVLVSDINDNAPTFTQTSYTLFVR 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 462 E----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINTDNG 511
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 512 HLFALRSLDYEALQAFEFRVGATDRGSPA 540
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 21/158 (13%)
Query: 48 THEIRNSTE--SKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDEND 105
+ +IR + E KSG + +T+ +D E + YS++I ATD G+ T V + V+D ND
Sbjct: 285 SEDIRKTFEINQKSGDITLTA-PLDFETIESYSIIIQATDGGGLFGKST-VRIQVMDVND 342
Query: 106 NSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPSNLVV 164
N+P + SS+ S + + + S D D GD ++P +L
Sbjct: 343 NAPEIT-----------VSSITSPIPETAPETVVMVFSIQDIDSGDNGRIVCSIPEDLPF 391
Query: 165 IVPQTGE--LLLTGDPPSD---DVEYELTVEAHDLQSP 197
++ + E L + P D EY +T+ DL P
Sbjct: 392 VLKSSVENYYTLETERPLDRESTAEYNITITVTDLGIP 429
>gi|297676221|ref|XP_002816039.1| PREDICTED: protocadherin beta-7 [Pongo abelii]
Length = 793
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 70/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE +Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTEKPLDRERNTEYNITITVTDLGTPRLKTEYNITVLVSDVNDNAPAFTQTSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 513 LFALRSLDYEALQAFEFRVGATDRGSPA 540
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LV + +DREE++++SL +TA D ++ T V + VLD NDN+P F + +Y+ V +
Sbjct: 194 LVLNQVLDREEISEFSLTLTALDGGSPPRSGTALVRILVLDINDNAPDFVRSLYKVQVPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVV----IVPQTGELLL 174
NS V S + SVSA D D ++AY + + ++ I P +G L L
Sbjct: 254 -----NSPVG-----SMVVSVSARDLDTGSNGEIAYAFSYATERILKTFQINPTSGNLHL 303
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+ ++ Y LT++A D
Sbjct: 304 KAQLDYEAIQTYTLTIQAKD 323
>gi|410972449|ref|XP_003992672.1| PREDICTED: protocadherin Fat 3 isoform 2 [Felis catus]
Length = 4589
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 15/117 (12%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
MENS V + I ++ + Y IT GN + FA+ +K+G
Sbjct: 1158 MENSPKDVSV--IQIQAEDPDSSSNEKLTYRITSGNPQNFFAIN------------TKTG 1203
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYR 116
++ TS +DRE+ A++ L +T TD K T V V VLDENDN P F +KVY+
Sbjct: 1204 LITTTSRKLDREQQAEHFLEVTVTDGGSSPKQSTIWVVVQVLDENDNKPQFPEKVYQ 1260
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 116/280 (41%), Gaps = 44/280 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYS+ G+ N+ F L +P + E++ T +DRE V Y+L+ ATD
Sbjct: 3064 IRYSL-YGSGNNEFFL-DPESGELK------------TLALLDRERVPVYNLIARATDGG 3109
Query: 88 G-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
G +++ H+ ++ D NDN PVFS + Y + + N + + + +V
Sbjct: 3110 GRFCQSDIHLILE--DVNDNPPVFSSEHY-------NACVYENTATKALLTRVQAVDPDV 3160
Query: 147 ADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE--YELTVEAHDLQSPSRYAREP 204
KV Y LA ++ + + +++ P + + Y ++V+A D QSP +
Sbjct: 3161 GINRKVVYSLADSADGFFSIDGSSGIIILEQPLDREQQPSYNISVQATD-QSPGQALSSL 3219
Query: 205 AQVWLQF-----NSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEM 259
A V + N PV + L + P AV T + D
Sbjct: 3220 ATVTITVLDINDNPPVFERRDYLVTV------PEDTSPGTQVLAVFATSK------DIGT 3267
Query: 260 EGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
I + + E+ +F+I + I+V E D + K++
Sbjct: 3268 NAEITYQIRSGNEQGRFRINPKTGGISVSEVLDYELCKKF 3307
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 23/187 (12%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y + GN + F + NP SGV+ T +D E + Y L+I AT++ G+
Sbjct: 1703 YEVKDGNIDGIFTI-NP-----------YSGVI-TTRKALDYERTSSYQLIIQATNMAGM 1749
Query: 90 NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
T V + ++DENDN+PVF Y G L + N +S + ATDAD
Sbjct: 1750 ASNAT-VNIQIVDENDNAPVFLFSQYS---GSLSEAAPVNSIVRSLDNSPLVIRATDADS 1805
Query: 150 DK---VAYKL--AVPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPSRYARE 203
++ + Y++ + + TG + + + + + V D SP A
Sbjct: 1806 NRNALLVYQIVESTAKKFFTVDSSTGAIRTIANLDHETIAHFHFHVHVRDSGSPQLTAES 1865
Query: 204 PAQVWLQ 210
P +V ++
Sbjct: 1866 PVEVNIE 1872
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 16/98 (16%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + +SI G+ + FA+ E G++ V +DRE V+ YSL++ A
Sbjct: 3372 PNGQIHFSIVNGDRDDEFAV------------EPVLGLVKVKK-KLDRERVSGYSLLVQA 3418
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIV 119
D GI + TV D+ D NDNSPVF+ Y ++
Sbjct: 3419 VD-SGIPAMSSTATVNIDISDVNDNSPVFTPANYTAVI 3455
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 125/311 (40%), Gaps = 57/311 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E S GT V L ++ + ++LV Y I Q N T +S SG+
Sbjct: 2298 EASLIGTPV--LQVVSTDADSGNNKLVHYQIVQDTYNSTDYFH----------IDSASGL 2345
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIV 119
+L T+ +D E V +L + ATD G + V V + D NDN PVF+Q +Y V
Sbjct: 2346 IL-TARMLDHELVQHCTLKVRATD-NGFPSLSSEVLVHIYISDINDNPPVFNQLIYESYV 2403
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIV--PQTGELLL 174
+L H+ + V A+DAD D++ Y + ++ + ++G + L
Sbjct: 2404 SELAPR-----GHF-----VTCVQASDADSSDFDRLEYSILSGNDRTSFLMDGKSGVITL 2453
Query: 175 TGDPPSD-DVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPH 233
+ + Y L V D S AQV ++ L S++ +
Sbjct: 2454 SNHRKQRMEPLYSLNVSVSDGLFTST-----AQVHIRVLGANLYSPAF-------SQSTY 2501
Query: 234 RIEKRRVTRAVRPTKRIDFSETDGE--MEGRIVFALEKETEREKFKIRDENPWITVDENG 291
E R A TK I TDG+ G+I +A+ + +++F I D NG
Sbjct: 2502 VAEVRE--NAAAGTKVIHVRATDGDPGTYGQITYAIINDFAKDRFLI---------DSNG 2550
Query: 292 DVRVKKRWDFE 302
V +R D E
Sbjct: 2551 QVITTERLDRE 2561
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 53 NSTESKSGV-LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS 111
+S +++ GV +V + +D E+ + Y++ + TD G N A T V + VLD NDN P FS
Sbjct: 1404 SSFDAEKGVGTIVIAKPLDAEQRSIYNMSVEVTD--GTNVAVTQVFIKVLDNNDNGPEFS 1461
Query: 112 QKVY 115
Q Y
Sbjct: 1462 QPNY 1465
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 41/88 (46%), Gaps = 13/88 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT GN FAL +S+ V + +DREE Y L ITATD
Sbjct: 2960 VSYHITGGNPRGRFAL---------GLVQSEWKVYV--KRPLDREEQDIYFLNITATDGL 3008
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVY 115
+ +A VTV D NDNSPV Q Y
Sbjct: 3009 FVTQATVEVTVS--DVNDNSPVCDQVAY 3034
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 72/167 (43%), Gaps = 21/167 (12%)
Query: 43 LKNPTTHEIRN-----STESKSGVLLVTSGDIDREEVAQYSLVITAT-DVKGINKAETHV 96
L P + I N +S SGV+ T DREE Y LV+ A+ ++ + A V
Sbjct: 2011 LNEPLKYSILNPGNKFKIKSTSGVIQTTGVPFDREEQELYELVVEASRELDHLRVARVVV 2070
Query: 97 TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVA 153
V++ D NDNSPVF Y V + + I V+A D D +V
Sbjct: 2071 RVNIEDINDNSPVFVGLPYYAAVQ----------VDAEPGTLIYQVTAIDKDKGANGEVT 2120
Query: 154 YKLAVPSNLVVIVPQTGELLLTGDPPSD--DVEYELTVEAHDLQSPS 198
Y L I P +G ++L SD ++EY +T+ A D PS
Sbjct: 2121 YVLQDDYGHFEINPNSGNVILKEAFNSDLSNIEYGVTILAKDGGKPS 2167
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 16/121 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ GT V L + S + + Y I GN+ F + NP T I S S V
Sbjct: 3247 EDTSPGTQV--LAVFATSKDIGTNAEITYQIRSGNEQGRFRI-NPKTGGI-----SVSEV 3298
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
L D E ++ LV+ A D A T V++++ D NDN P FSQ VY ++
Sbjct: 3299 L-------DYELCKKFYLVVEAKDGGTPALSAVTTVSINLTDVNDNPPRFSQDVYSAVIS 3351
Query: 121 D 121
+
Sbjct: 3352 E 3352
Score = 37.4 bits (85), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVY 115
+GVL V S +D E + Y L + A+D + A VTVD+L D NDN P+F Q Y
Sbjct: 2237 TGVLKVVS-PLDYEITSVYRLTVRASD--ALTGARAEVTVDLLVNDVNDNPPIFDQPTY 2292
>gi|326673389|ref|XP_003199870.1| PREDICTED: protocadherin gamma-A8-like [Danio rerio]
Length = 810
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G++DRE +++Y++ ITATD + T ++ + V D NDN PVF Q+ YR V +
Sbjct: 399 LVTTGELDRELLSEYNITITATDEGSPPLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 458
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ K SSI SVSATD D
Sbjct: 459 ----------NNKAGSSICSVSATDPD 475
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 77/150 (51%), Gaps = 23/150 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET---HVTVDVLDENDNSPVFSQKVYRFIV 119
LV + ++DRE+ + +L++TA D ++ T HVTV LD NDN+PVFSQ VY+ +
Sbjct: 189 LVLNKELDREQQKEVTLILTAVDGGTPPRSGTVAIHVTV--LDANDNAPVFSQAVYKVSL 246
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPS----NLVVIVPQTGEL 172
+ NS V + + +VSATDAD KV Y S L + TGE+
Sbjct: 247 PE-----NSPVD-----TVVVTVSATDADEGQNGKVTYVFGHVSEEDKTLFSLNRNTGEI 296
Query: 173 LLTGDPPSDD-VEYELTVEAHDLQSPSRYA 201
+TG ++ YEL V A D + Y+
Sbjct: 297 TVTGAIDYEEKSAYELRVLAKDAAGLTSYS 326
>gi|292620529|ref|XP_002664328.1| PREDICTED: protocadherin gamma-A11-like [Danio rerio]
Length = 808
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 98/194 (50%), Gaps = 36/194 (18%)
Query: 22 KHPHQLVRYSITQGNDN-------HTFALKNPTTHEIRNSTESKSG--VLLVTSGDIDRE 72
+H + R+ + + +D T++++ + ST++ G V LV ++DRE
Sbjct: 147 EHAVKGARFRVNEAHDADIGQNGVQTYSIERNNHFILSVSTKADGGKNVELVLDKELDRE 206
Query: 73 EVAQYSLVITATDVKGINKAET---HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSN 129
+ + +L++TA D ++ T HVT VLD NDN+PVFSQ VY+ + + NS
Sbjct: 207 QQKEVTLILTAVDGGTPPRSGTVAIHVT--VLDANDNAPVFSQAVYKVSLPE-----NSP 259
Query: 130 VSHWKKFSSIGSVSATDAD---GDKVAYKLA----VPSNLVVIVPQTGELLLTGDPPSD- 181
V + + +VSATDAD +V Y+ + + L + +GE+ + G P D
Sbjct: 260 VD-----TVVVTVSATDADEGQNGEVTYEFSRISGIAKELFYLNENSGEIKVKG--PIDF 312
Query: 182 --DVEYELTVEAHD 193
+V+YE+ +E D
Sbjct: 313 EEEVKYEMLIEGKD 326
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G++DRE +++Y++ ITATD + T ++ + V D NDN PVF Q+ YR V +
Sbjct: 407 LVTTGELDRELLSEYNITITATDEGSPPLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 466
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ K SSI SVSATD D
Sbjct: 467 ----------NNKAGSSICSVSATDPD 483
>gi|293343039|ref|XP_001065031.2| PREDICTED: protocadherin beta-6 [Rattus norvegicus]
gi|293354898|ref|XP_001055698.2| PREDICTED: protocadherin beta-6 [Rattus norvegicus]
gi|149017300|gb|EDL76351.1| rCG49357 [Rattus norvegicus]
Length = 796
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 75/158 (47%), Gaps = 24/158 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
L T G +DRE A+Y++ IT TD+ H +TV V D NDN+P F+Q Y V +
Sbjct: 401 LETDGALDRESRAEYNITITVTDMGTPRLTTQHTITVQVSDINDNAPTFTQTSYTLFVHE 460
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN--------LVVIVPQTG 170
NS H IG++SATD+D + Y L +P N LV I G
Sbjct: 461 ----NNSPALH------IGTISATDSDSGTNAHITYSL-LPRNDPHLALSSLVSINADNG 509
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQV 207
+L + ++ +E V A D SP+ +++ +V
Sbjct: 510 QLFALRALDYESLKAFEFQVNATDQGSPALHSQALVRV 547
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 45 NPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK-AETHVTVDVLD 102
NP H + RN ++ + LV + +DREE Q L +TA D + T + + VLD
Sbjct: 174 NPHFHVLTRNRSDGRKFPELVLNKALDREEQDQLRLKLTAVDGGSPPRFGTTEIQILVLD 233
Query: 103 ENDNSPVFSQKVY 115
NDN+P F+Q++Y
Sbjct: 234 INDNAPEFAQELY 246
>gi|410948479|ref|XP_003980966.1| PREDICTED: protocadherin beta-10 [Felis catus]
Length = 660
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 61/121 (50%), Gaps = 21/121 (17%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+L+T G +DRE A+Y++ IT TD+ K + ++TV V D NDN+P FSQ Y V
Sbjct: 401 ILMTEGGLDRESQAEYNITITVTDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVR 460
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATD------ADGDKVAYKL----AVPSNLVVIVPQTG 170
+ NS H IGSVSATD + A L AV LVV+V G
Sbjct: 461 E----NNSPALH------IGSVSATDRXXXXXXXXXRTARLLSERDAVKHRLVVLVRDNG 510
Query: 171 E 171
E
Sbjct: 511 E 511
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 52/105 (49%), Gaps = 17/105 (16%)
Query: 45 NPTTH-EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLD 102
NP H +I +S E LV +DRE+ + SL +TA D ++ T + + ++D
Sbjct: 174 NPFFHIKISDSDEGMIYPELVLDKALDREKQHELSLTLTALDGGSPPRSGTTTIRIVIVD 233
Query: 103 ENDNSPVFSQKVY---------------RFIVGDLKSSLNSNVSH 132
NDN+P FSQ +Y + GD+ S +N+++S+
Sbjct: 234 INDNAPQFSQTMYETQAPENSPVGSLIAKVSAGDIDSGVNADISY 278
>gi|332234767|ref|XP_003266575.1| PREDICTED: protocadherin gamma-B2 [Nomascus leucogenys]
Length = 824
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 96/206 (46%), Gaps = 34/206 (16%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQK 113
+ SK+ LVT G +DREE+ +Y+L ITATD K + VT+ + D NDN PVF Q
Sbjct: 409 SSSKNYYKLVTDGALDREEIPEYNLTITATDGGKPPLSSSIIVTLHISDVNDNGPVFQQT 468
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL-------- 162
Y V + + +SI +SA+D D +V+Y + V S+L
Sbjct: 469 SYMVHVAE----------NNPPGASIAQISASDPDLGPNGQVSYSI-VASDLKPREILSY 517
Query: 163 VVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVW---LQFNSP-VL- 216
V + Q+G + + + +ELT++A D SP+ A +V L N+P VL
Sbjct: 518 VSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSANVSLRVLVGDLNDNAPRVLY 577
Query: 217 -----QDEQLLQMIDRKSEAPHRIEK 237
L M+ R +E + + K
Sbjct: 578 PALGPDGSALFDMVPRAAEPGYLVTK 603
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 56/116 (48%), Gaps = 12/116 (10%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++K GT P L S P+ L RY + NDN F L T + R E
Sbjct: 157 ESTKPGTTFPLDPAL--DSDVGPNSLQRYHL---NDNEYFDLAEKQTPDGRKYPE----- 206
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYR 116
L+ +DREE + + L +TA D ++ T + + V D NDN PVFSQ VYR
Sbjct: 207 -LILKHSLDREEHSFHQLALTAVDGGDPPQSGTTQIRIQVTDANDNPPVFSQDVYR 261
>gi|296485293|tpg|DAA27408.1| TPA: protocadherin alpha 13 [Bos taurus]
Length = 950
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 20/156 (12%)
Query: 48 THEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDN 106
T + +NS E S + LV +DREE+ ++SL++TA+D T + + +LD NDN
Sbjct: 179 TLDTQNSREQMSSLSLVLRKSLDREEIQEHSLLLTASDGGKPELTSTVQLLITILDVNDN 238
Query: 107 SPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVV-- 164
+P F Q +Y+ V L++SLN ++ K ++ T+AD + Y P + +
Sbjct: 239 APEFDQLIYK--VRMLENSLNGSL--VIKLNATDPDDGTNAD---ITYSFRRPVSPAILY 291
Query: 165 ---IVPQTGELLLTGDPPSDDVE----YELTVEAHD 193
I P +GE+ G D E YE++VEA D
Sbjct: 292 AFYINPDSGEIRTKG---KLDFEENKLYEISVEAID 324
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 84/199 (42%), Gaps = 36/199 (18%)
Query: 69 IDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE + Y +V+TA D + A V+V+V D NDN+P F Q Y V + N
Sbjct: 413 LDRESASNYEVVVTARDGGSPSLSATASVSVEVADVNDNAPAFPQPEYTVFVKE----NN 468
Query: 128 SNVSHWKKFSSIGSVSATDADGDK---VAYKLA-------VPSNLVVIVPQTGELLLTGD 177
H I +VSA DAD + V+Y L S+ V + ++G++
Sbjct: 469 PPGCH------IFTVSARDADAQENALVSYSLVERRVGERALSSYVSVHAESGKVYALQ- 521
Query: 178 PPSDDVEYELT---VEAHDLQSPSRYAREPAQVWL---QFNSPVL-------QDEQLLQM 224
P D E EL V A D P + QV++ N+P L + Q+
Sbjct: 522 -PLDHEELELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLPPGPSGGPSAVSQV 580
Query: 225 IDRKSEAPHRIEKRRVTRA 243
+ R +A H + K R A
Sbjct: 581 VSRSVDAGHVVAKVRAVDA 599
>gi|82617653|ref|NP_001032414.1| protocadherin gamma-A12 [Rattus norvegicus]
gi|50512396|gb|AAT77593.1| protocadherin gamma a12 [Rattus norvegicus]
Length = 932
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
L+T +DRE+V Y++ +TATD +G ETH++++V D NDN P+F Q Y +
Sbjct: 404 LLTDAVLDREQVPSYNITVTATD-RGSPPLTTETHLSLNVADANDNPPIFLQASYWAYIQ 462
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLA 157
+ + + +SI SV+A D D DK V Y LA
Sbjct: 463 E----------NNPRGASIASVTAHDPDSDKNAQVTYSLA 492
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 45 NPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDV 100
+P H E++ + LV +DREE A + LV+TA+D + + V V
Sbjct: 173 SPNAHFSLEVQKGADGNKYPELVLESSLDREEKAAHLLVLTASDAGDPVRSGTARILVTV 232
Query: 101 LDENDNSPVFSQKVYRFIV 119
LD NDN+P F++ YR V
Sbjct: 233 LDANDNAPAFARSEYRVNV 251
>gi|410948515|ref|XP_004001536.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-B6 [Felis
catus]
Length = 840
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 78/153 (50%), Gaps = 26/153 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT G +DRE+ +Y++ ITATD +GI + T +T+ + D NDN+P+F Q Y V
Sbjct: 404 LVTDGPLDREQTPEYNVTITATD-RGIPPLSSSTTITLHITDVNDNTPIFHQASYVVHVA 462
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL--------VVIVPQT 169
+ + +SI VSA+D D +V+Y + V S+L V + Q+
Sbjct: 463 E----------NNPPGASIAQVSASDPDLGPNGRVSYSI-VASDLEPRALASYVSVSAQS 511
Query: 170 GELLLTGDPPSDDVE-YELTVEAHDLQSPSRYA 201
G + + + +ELTV+A D SP+ A
Sbjct: 512 GVVFAQRAFDHEQLRAFELTVQARDQGSPALSA 544
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 15/83 (18%)
Query: 69 IDREEVAQYSLVITATDVKGIN---KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+DREE + L++TA D G N A T + + V D NDN PVFS+ YR V +
Sbjct: 200 LDREEQHSHHLILTALD--GGNPPRSATTRIEISVRDANDNFPVFSKDEYRISVSE---- 253
Query: 126 LNSNVSHWKKFSSIGSVSATDAD 148
+ SS+ V+ATD D
Sbjct: 254 ------NLPPGSSVLQVTATDKD 270
>gi|334311095|ref|XP_001377932.2| PREDICTED: protocadherin gamma-B5-like [Monodelphis domestica]
Length = 811
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 95/198 (47%), Gaps = 34/198 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIVG 120
L+T G +DRE++ +Y++ +TATD KG T +T+++ D NDN PVF Q Y V
Sbjct: 405 LLTDGPLDREQIPEYNITVTATD-KGNPPLSTSKTLTLNIADVNDNHPVFLQPSYVVYVP 463
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLA------VP-SNLVVIVPQTG 170
+ S +SI VSA+D+D +V+Y + +P S+ V + +G
Sbjct: 464 ENNPSA----------ASIARVSASDSDLEGNGRVSYSIVSSDLAPLPLSSYVSVNGHSG 513
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL--------QFNSPVLQDEQ- 220
++ + V +ELT++A D SP+ A +V++ P L ++
Sbjct: 514 DIFAQRSFDYEQVRTFELTLQACDSGSPALCANVTLRVFVLDRNDNAPNILYPALGPDRS 573
Query: 221 -LLQMIDRKSEAPHRIEK 237
L M+ R +E + + K
Sbjct: 574 ALFDMVPRSAEPGYLVSK 591
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 63/140 (45%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE+ + + LV+ A D + + ++V D NDN PVFSQ YR
Sbjct: 194 LVMEKPLDREKQSSHHLVLMALDGGDPVLSGTAQIRINVTDANDNPPVFSQDFYRV---- 249
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPS----NLVVIVPQTGELLL 174
SL N+ SS+ V ATD D ++ Y L N+ + PQ GE+
Sbjct: 250 ---SLRENLPPG---SSVLRVKATDKDEGINAEITYFLKTTGDNALNIFNVDPQNGEIKT 303
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+D E + L VEA D
Sbjct: 304 QDHLDFEDTESFTLGVEARD 323
>gi|354500185|ref|XP_003512181.1| PREDICTED: protocadherin beta-15-like [Cricetulus griseus]
Length = 683
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 13/94 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIVG 120
L+T G +DRE A+Y++ IT TD+ G + +T +TV V D NDN+P F+Q Y V
Sbjct: 392 LMTEGALDRESRAEYNITITVTDL-GTPRLKTQHTLTVQVSDVNDNAPAFTQTSYTLFVQ 450
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAY 154
+ NS H IG++SATD+D A+
Sbjct: 451 E----NNSPALH------IGTISATDSDSGSNAH 474
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 51 IRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPV 109
RN + + LV ++DREE A++ L +TA D + T + + ++D NDN+P
Sbjct: 171 FRNRGDGRKYPELVLDKELDREEQAEFRLTLTALDGGSPPRTGTSQIRIILVDVNDNAPE 230
Query: 110 FSQKVYR 116
F Q +Y+
Sbjct: 231 FVQALYQ 237
>gi|149017299|gb|EDL76350.1| rCG49505 [Rattus norvegicus]
Length = 797
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 14/101 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT +D+ H +TV V D NDN+P F+Q Y V +
Sbjct: 402 LVTEGPLDRENRAEYNITITVSDLGTPRLTTQHTITVQVSDINDNAPAFTQTSYTMFVHE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVP 159
NS H IG++SATD+D + Y L P
Sbjct: 462 ----NNSPALH------IGTISATDSDSGSNAHITYSLLPP 492
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 72/153 (47%), Gaps = 21/153 (13%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTT------HEIRNS-TESKSGVLLVTSG 67
+L HP + Q +D + A++N T H + +S T+ + LV
Sbjct: 139 LLTIPESAHPGTVFPLKAAQDSDIGSNAVQNYTVNPNLHFHVVTHSRTDGRKYPELVVDR 198
Query: 68 DIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+DREE + +L++TA D ++ T V ++V+D NDNSP F Q +Y+ V + + L
Sbjct: 199 ALDREEQPELTLILTALDGGTPRRSGTTTVHIEVVDINDNSPQFVQSLYKVQVPE-NNPL 257
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
N+ V +VSATD D V Y L
Sbjct: 258 NAFVV---------TVSATDLDAGVYGNVTYSL 281
>gi|1584661|prf||2123329A proto-cadherin 3
Length = 797
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 14/101 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT +D+ H +TV V D NDN+P F+Q Y V +
Sbjct: 402 LVTEGPLDRENRAEYNITITVSDLGTPRLTTQHTITVQVSDINDNAPAFTQTSYTMFVHE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVP 159
NS H IG++SATD+D + Y L P
Sbjct: 462 ----NNSPALH------IGTISATDSDSGSNAHITYSLLPP 492
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + +L++TA D +++ T V ++V+D NDNSP F Q +Y+ V +
Sbjct: 194 LVLDRALDREEQPELTLILTALDGGAPSRSGTTTVHIEVVDINDNSPQFVQSLYKVQVPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
+ LN+ V +VSATD D V Y L
Sbjct: 254 -NNPLNAFVV---------TVSATDLDAGVYGNVTYSL 281
>gi|410972447|ref|XP_003992671.1| PREDICTED: protocadherin Fat 3 isoform 1 [Felis catus]
Length = 4557
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 15/117 (12%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
MENS V + I ++ + Y IT GN + FA+ +K+G
Sbjct: 1158 MENSPKDVSV--IQIQAEDPDSSSNEKLTYRITSGNPQNFFAIN------------TKTG 1203
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYR 116
++ TS +DRE+ A++ L +T TD K T V V VLDENDN P F +KVY+
Sbjct: 1204 LITTTSRKLDREQQAEHFLEVTVTDGGSSPKQSTIWVVVQVLDENDNKPQFPEKVYQ 1260
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 116/280 (41%), Gaps = 44/280 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYS+ G+ N+ F L +P + E++ T +DRE V Y+L+ ATD
Sbjct: 3064 IRYSL-YGSGNNEFFL-DPESGELK------------TLALLDRERVPVYNLIARATDGG 3109
Query: 88 G-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
G +++ H+ ++ D NDN PVFS + Y + + N + + + +V
Sbjct: 3110 GRFCQSDIHLILE--DVNDNPPVFSSEHY-------NACVYENTATKALLTRVQAVDPDV 3160
Query: 147 ADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE--YELTVEAHDLQSPSRYAREP 204
KV Y LA ++ + + +++ P + + Y ++V+A D QSP +
Sbjct: 3161 GINRKVVYSLADSADGFFSIDGSSGIIILEQPLDREQQPSYNISVQATD-QSPGQALSSL 3219
Query: 205 AQVWLQF-----NSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEM 259
A V + N PV + L + P AV T + D
Sbjct: 3220 ATVTITVLDINDNPPVFERRDYLVTV------PEDTSPGTQVLAVFATSK------DIGT 3267
Query: 260 EGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
I + + E+ +F+I + I+V E D + K++
Sbjct: 3268 NAEITYQIRSGNEQGRFRINPKTGGISVSEVLDYELCKKF 3307
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 80/187 (42%), Gaps = 23/187 (12%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y + GN + F + NP SGV+ T +D E + Y L+I AT++ G+
Sbjct: 1703 YEVKDGNIDGIFTI-NP-----------YSGVI-TTRKALDYERTSSYQLIIQATNMAGM 1749
Query: 90 NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
T V + ++DENDN+PVF Y G L + N +S + ATDAD
Sbjct: 1750 ASNAT-VNIQIVDENDNAPVFLFSQYS---GSLSEAAPVNSIVRSLDNSPLVIRATDADS 1805
Query: 150 DK---VAYKL--AVPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPSRYARE 203
++ + Y++ + + TG + + + + + V D SP A
Sbjct: 1806 NRNALLVYQIVESTAKKFFTVDSSTGAIRTIANLDHETIAHFHFHVHVRDSGSPQLTAES 1865
Query: 204 PAQVWLQ 210
P +V ++
Sbjct: 1866 PVEVNIE 1872
Score = 41.6 bits (96), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 16/98 (16%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + +SI G+ + FA+ E G++ V +DRE V+ YSL++ A
Sbjct: 3372 PNGQIHFSIVNGDRDDEFAV------------EPVLGLVKVKK-KLDRERVSGYSLLVQA 3418
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIV 119
D GI + TV D+ D NDNSPVF+ Y ++
Sbjct: 3419 VD-SGIPAMSSTATVNIDISDVNDNSPVFTPANYTAVI 3455
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 125/311 (40%), Gaps = 57/311 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E S GT V L ++ + ++LV Y I Q N T +S SG+
Sbjct: 2298 EASLIGTPV--LQVVSTDADSGNNKLVHYQIVQDTYNSTDYFH----------IDSASGL 2345
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIV 119
+L T+ +D E V +L + ATD G + V V + D NDN PVF+Q +Y V
Sbjct: 2346 IL-TARMLDHELVQHCTLKVRATD-NGFPSLSSEVLVHIYISDINDNPPVFNQLIYESYV 2403
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIV--PQTGELLL 174
+L H+ + V A+DAD D++ Y + ++ + ++G + L
Sbjct: 2404 SELAPR-----GHF-----VTCVQASDADSSDFDRLEYSILSGNDRTSFLMDGKSGVITL 2453
Query: 175 TGDPPSD-DVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPH 233
+ + Y L V D S AQV ++ L S++ +
Sbjct: 2454 SNHRKQRMEPLYSLNVSVSDGLFTST-----AQVHIRVLGANLYSPAF-------SQSTY 2501
Query: 234 RIEKRRVTRAVRPTKRIDFSETDGE--MEGRIVFALEKETEREKFKIRDENPWITVDENG 291
E R A TK I TDG+ G+I +A+ + +++F I D NG
Sbjct: 2502 VAEVRE--NAAAGTKVIHVRATDGDPGTYGQITYAIINDFAKDRFLI---------DSNG 2550
Query: 292 DVRVKKRWDFE 302
V +R D E
Sbjct: 2551 QVITTERLDRE 2561
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 53 NSTESKSGV-LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS 111
+S +++ GV +V + +D E+ + Y++ + TD G N A T V + VLD NDN P FS
Sbjct: 1404 SSFDAEKGVGTIVIAKPLDAEQRSIYNMSVEVTD--GTNVAVTQVFIKVLDNNDNGPEFS 1461
Query: 112 QKVY 115
Q Y
Sbjct: 1462 QPNY 1465
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 41/88 (46%), Gaps = 13/88 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT GN FAL +S+ V + +DREE Y L ITATD
Sbjct: 2960 VSYHITGGNPRGRFAL---------GLVQSEWKVYV--KRPLDREEQDIYFLNITATDGL 3008
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVY 115
+ +A VTV D NDNSPV Q Y
Sbjct: 3009 FVTQATVEVTVS--DVNDNSPVCDQVAY 3034
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 72/167 (43%), Gaps = 21/167 (12%)
Query: 43 LKNPTTHEIRN-----STESKSGVLLVTSGDIDREEVAQYSLVITAT-DVKGINKAETHV 96
L P + I N +S SGV+ T DREE Y LV+ A+ ++ + A V
Sbjct: 2011 LNEPLKYSILNPGNKFKIKSTSGVIQTTGVPFDREEQELYELVVEASRELDHLRVARVVV 2070
Query: 97 TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVA 153
V++ D NDNSPVF Y V + + I V+A D D +V
Sbjct: 2071 RVNIEDINDNSPVFVGLPYYAAVQ----------VDAEPGTLIYQVTAIDKDKGANGEVT 2120
Query: 154 YKLAVPSNLVVIVPQTGELLLTGDPPSD--DVEYELTVEAHDLQSPS 198
Y L I P +G ++L SD ++EY +T+ A D PS
Sbjct: 2121 YVLQDDYGHFEINPNSGNVILKEAFNSDLSNIEYGVTILAKDGGKPS 2167
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 55/121 (45%), Gaps = 16/121 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ GT V L + S + + Y I GN+ F + NP T I S S V
Sbjct: 3247 EDTSPGTQV--LAVFATSKDIGTNAEITYQIRSGNEQGRFRI-NPKTGGI-----SVSEV 3298
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
L D E ++ LV+ A D A T V++++ D NDN P FSQ VY ++
Sbjct: 3299 L-------DYELCKKFYLVVEAKDGGTPALSAVTTVSINLTDVNDNPPRFSQDVYSAVIS 3351
Query: 121 D 121
+
Sbjct: 3352 E 3352
>gi|395504710|ref|XP_003756690.1| PREDICTED: protocadherin beta-4 [Sarcophilus harrisii]
Length = 794
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 53/101 (52%), Gaps = 14/101 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE+ QY++ IT TD+ K E ++TV + D NDN PVF+Q Y + +
Sbjct: 403 LVTEGALDREKRIQYNITITITDLGYPRLKTEHNITVFISDVNDNPPVFTQTAYTLYLRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVP 159
NS H IGSVSA D D K+ Y L P
Sbjct: 463 ----NNSPALH------IGSVSADDRDEGANAKLTYSLLPP 493
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 30/188 (15%)
Query: 24 PHQLVRYSITQGNDNHTFALKN----PTTHEI---RNSTESKSGVLLVTSGDIDREEVAQ 76
P + R + Q D L+N P H + R ++ + L+ +DREE+ +
Sbjct: 148 PGTVFRLKVAQDLDVGINGLQNYTISPNPHFLVRTRPRSDGRKVPELILDKVLDREELPE 207
Query: 77 YSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWK 134
+L +TA D GI V V V+D NDN+PVF+ Y + + NS +
Sbjct: 208 LTLTLTAVD-GGIPSRSGTAQVRVIVMDINDNAPVFAHARYEVQIPE-----NSPID--- 258
Query: 135 KFSSIGSVSATDAD----GDKVAYKLAVPSNLVV----IVPQTGELLLTGDPPSDDVE-Y 185
S + +VSA D D GD +AY L SN V + P +GE+ L + ++ Y
Sbjct: 259 --SLVVTVSARDLDSGINGD-LAYALYQASNEVSQTFGVDPISGEIRLKKQLDFEAIQKY 315
Query: 186 ELTVEAHD 193
E+ +EA D
Sbjct: 316 EVDIEAID 323
>gi|29336091|ref|NP_775122.1| protocadherin-3 precursor [Rattus norvegicus]
gi|13431365|sp|Q63418.1|PCDH3_RAT RecName: Full=Protocadherin-3; Flags: Precursor
gi|1161230|gb|AAC42079.1| protocadherin-3 [Rattus norvegicus]
Length = 797
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 14/101 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT G +DRE A+Y++ IT +D+ H +TV V D NDN+P F+Q Y V +
Sbjct: 402 LVTEGPLDRENRAEYNITITVSDLGTPRLTTQHTITVQVSDINDNAPAFTQTSYTMFVHE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVP 159
NS H IG++SATD+D + Y L P
Sbjct: 462 ----NNSPALH------IGTISATDSDSGSNAHITYSLLPP 492
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + +L++TA D +++ T V ++V+D NDNSP F Q +Y+ V +
Sbjct: 194 LVLDRALDREEQPELTLILTALDGGAPSRSGTTTVHIEVVDINDNSPQFVQSLYKVQVPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
+ LN+ V +VSATD D V Y L
Sbjct: 254 -NNPLNAFVV---------TVSATDLDAGVYGNVTYSL 281
>gi|390337821|ref|XP_785601.3| PREDICTED: protocadherin Fat 4 [Strongylocentrotus purpuratus]
Length = 5000
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 133/321 (41%), Gaps = 54/321 (16%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN S + VK V ++ ++ YSI G + F++ + TT +IR
Sbjct: 1782 ENVASNSPVK----TVMATDADLDTIIFYSIVDGATD-LFSIDS-TTGQIR--------- 1826
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
T G +DRE A Y L + A+D G + T + +++LDENDN PVFS Y F+V +
Sbjct: 1827 ---TRGVVDRESSAVYQLQLQASD--GTLTSTTTIDINLLDENDNDPVFSLSTYSFLVPE 1881
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL----AVPSNLVVIVPQTGELLL 174
+G V ATD D +VAY + A ++ + P TG L
Sbjct: 1882 ----------DEMVGEDVGVVVATDPDAGLNGEVAYSVVEEGAPGEDVFYLDPATGAFRL 1931
Query: 175 TGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSE 230
S D E Y +TV A D S R + A V++ V + + +D E
Sbjct: 1932 Q---QSLDYEVKQHYFMTVMATDKGSSPRSST--ATVYINVED-VNDNNPVYNPVDYSEE 1985
Query: 231 APHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDEN 290
P E + +V D D G + F++ ++F + +T+ +N
Sbjct: 1986 VP---EDVAIGTSVVTLTATDL---DSGSNGELQFSIASGDPSQRFTVYPNGTIVTI-KN 2038
Query: 291 GDVRVKKRWDFEELGPEKTID 311
D + ++ E + + T+D
Sbjct: 2039 LDREPESFYNLEVVASDMTLD 2059
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 82/182 (45%), Gaps = 35/182 (19%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+V YSI GN F + S+SG + + ++D EE +SL I ATD
Sbjct: 2624 IVTYSIAGGNHGEHFGVG------------SQSGEVSIIK-ELDYEESKSFSLWIAATDT 2670
Query: 87 KGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
++ + V VLD NDN+P+F Q VY S V + SVSAT
Sbjct: 2671 ANTQLSDFVELQVSVLDVNDNAPLFDQSVY----------FTSVVEEQSGQVQVVSVSAT 2720
Query: 146 DAD----GDKVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDD---VEYELTVEAHDLQSP 197
D D GD V+Y + + +N + +G ++T P D Y LTVEA D +P
Sbjct: 2721 DEDSLSNGD-VSYAITLGNTNNAFDISSSG--VITTTQPLDRETVASYILTVEATDGGNP 2777
Query: 198 SR 199
S+
Sbjct: 2778 SQ 2779
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 124/288 (43%), Gaps = 37/288 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSI--TQGNDNHTFALKNPTTHEIRNSTESKS 59
EN+ SG+ V+ LP + + + Y I G + F L+ R +++
Sbjct: 176 ENAHSGS-VQILPSAMDADKDSNGYISTYLIESVSGGGDDAFLLQT-----FRPREDAEY 229
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQKVYRFI 118
V LVT+ +DRE Y L I+ATD + V V + D NDNSP+F+Q Y F
Sbjct: 230 TVSLVTNSLLDRETEDFYILNISATDNSSTPRTGYLIVNVTITDVNDNSPIFTQTTY-FA 288
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLA--VPSNLVVIVPQTGEL 172
+ S+ ++V H ++ATD D GD + Y+L + N + P TG +
Sbjct: 289 TVNESSAAGTSVVH---------LNATDIDQGSNGD-IVYRLKNELTDNF-ALDPDTGWI 337
Query: 173 LLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQLLQMIDRKS 229
L P Y V A D SPS+ + V ++ +SPV+ E L+ I+
Sbjct: 338 TLLRQLPYVANGYLFEVTATDKGSPSQSSSAFVNVMVEDENDHSPVI--EVLIPEIEASG 395
Query: 230 EAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFK 277
A I + + + K ID D E GR+ ++ +R F
Sbjct: 396 VA--SISETMLPGPLFNLKAID---EDREENGRVSMSIHSGNDRNDFS 438
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 121/295 (41%), Gaps = 54/295 (18%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ L ++SI G + FA+ NP T EI + +D E+ A + L++ +
Sbjct: 2828 NNLSQFSIEAGGQSSLFAI-NPITGEI------------TLNSSLDFEDEAVHYLLVKSF 2874
Query: 85 DVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSH--WKKFSSIGSV 142
D ++ +T V V+V D NDN+PVF++ S+N+ + + I +V
Sbjct: 2875 DPDSSHEVQTQVLVNVEDTNDNAPVFTEN-----------SINTTYPEIFFSSGNVIATV 2923
Query: 143 SATDA-DGD--KVAYKLAVPS-----------NLVVIVPQTGELLLTGDPPSDDVEYELT 188
SATDA DGD +V Y L + + VP ++ + + S+ Y +
Sbjct: 2924 SATDADDGDNGQVDYILKTMTEHFRVETINNRGWIFPVPPISYIVPSPEDTSNPNTYTFS 2983
Query: 189 VEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSE-APHRIEKRRVTRAVRPT 247
V A D +P+ Y A V + V QD + S +P R TR +
Sbjct: 2984 VFAVDRGTPALYGE--ASVIIT----VTQDNSYTPVFATPSYFSPVTANTRSNTRVL--- 3034
Query: 248 KRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWIT---VDENGDVRVKKRW 299
++ + D I +++ EKF + + WI V GDV + +
Sbjct: 3035 -QVLAVDQDTGSNAAITYSISDGNGTEKFDVEADTGWILTKGVSLAGDVGITYQL 3088
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 50/277 (18%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ + YSI GN+ F + + ++L+ +DRE Y L + A
Sbjct: 1264 NSYILYSIVSGNEEKRFHIDH-----------VHGQIVLIAP--LDREVTEGYVLRVKAR 1310
Query: 85 DVKGINKAETHVTVD--VLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFS-SIGS 141
D GI E+ V V+ VLDEND+ P FS + R I V+ + +IG
Sbjct: 1311 D-GGIVPQESFVEVEITVLDENDHRPSFSVDLQREI----------EVTECLQIGDTIGG 1359
Query: 142 VSATDAD---GDKVAYKLAVPS--NLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQ 195
V ATD D +++Y + + + + +GE+ LTG + +Y L + A D
Sbjct: 1360 VQATDMDINSNGQISYTITGGNLDGVFGVNANSGEVYLTGYLDHEATSQYSLNITARDGG 1419
Query: 196 SPSRYAREPAQVWLQ---FNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDF 252
SPS A + ++ NSP+ + + + E P E RV+
Sbjct: 1420 SPSLQAVVSMVINIRDCNDNSPIF---AYVGVPEIDEEKPEGFEVVRVSA---------- 1466
Query: 253 SETDGEMEGRIVFALEKE-TEREKFKIRDENPWITVD 288
S++D + G + F++ + + F I E+ WIT +
Sbjct: 1467 SDSDSGVNGEVRFSISSQRPSGDFFAIDPESGWITTN 1503
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 32/201 (15%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G++ L + + + + ++RYSI G+ FA+ +P T GVL V SG
Sbjct: 2202 GLEFLKVTASDPDEGLNSIIRYSIFSGDSGRAFAI-DPVT-----------GVLSVNSG- 2248
Query: 69 IDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
++ E+ + Y+L + A D +G + + VT+ V D NDN+PVF S +
Sbjct: 2249 LNYEQRSSYTLTVRAQD-QGYSTQVSSVTVTITVADVNDNAPVFEDSY-------APSIM 2300
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGELLLTGD--PPSD 181
+N+ + + I V A DAD + ++L N + + T L+ + D
Sbjct: 2301 ENNLPN----ADIVQVRADDADSGVNGMINFRLESDYNGLFTIGSTSGLIQVTEVLDYED 2356
Query: 182 DVEYELTVEAHDLQSPSRYAR 202
E+EL V A D +PS R
Sbjct: 2357 QNEFELIVIAEDSGTPSHQTR 2377
Score = 43.9 bits (102), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 19/124 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVT-SGDIDREEVAQYSLVITATDV 86
V SI GND + F+ + I T +L V+ S +IDRE +A Y+L A D+
Sbjct: 424 VSMSIHSGNDRNDFSGTS-----ISLPTGDVFFLLRVSPSANIDREIIASYNLTFAAEDM 478
Query: 87 KGINKAETH--VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSA 144
G T+ + + V+DEND++P+F Q+ YR G L+S + S + SV+A
Sbjct: 479 -GTPPRRTYRSIIIYVVDENDHAPMFLQESYR--AGLLES--------IQVGSFVKSVTA 527
Query: 145 TDAD 148
TDAD
Sbjct: 528 TDAD 531
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 16/166 (9%)
Query: 3 NSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL 62
N++S T V L +L + + YSI+ GN F + E+ +G +
Sbjct: 3026 NTRSNTRV--LQVLAVDQDTGSNAAITYSISDGNGTEKFDV------------EADTGWI 3071
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L + + Y L++ ATD I K ET VT + D NDN+PVF YR + +
Sbjct: 3072 LTKGVSLAGDVGITYQLLVKATDNGNIKKEDETTVTFLITDSNDNAPVFDDDTYRSSIAE 3131
Query: 122 LKSSLNSNVSHWKKFSSI-GSVSATDADGDKVAYKLAVPSNLVVIV 166
+ V S I G ++ + + D + + S +V +V
Sbjct: 3132 DVGGYVATVRAEDDDSGINGEITYSISGADAALFSIDAVSGIVSLV 3177
Score = 42.7 bits (99), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 18/106 (16%)
Query: 16 LVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVA 75
L + + + L+ Y IT GN + +F + G++ V +DRE+V
Sbjct: 1043 LATDADQGTNGLISYRITSGNTD-SFGIF-------------PDGMVYVKRA-LDREQVD 1087
Query: 76 QYSLVITATDVKGINKAETHVTVD--VLDENDNSPVFSQKVYRFIV 119
QY L I ATD G+ + + ++ VLDENDN P F Y F +
Sbjct: 1088 QYDLTIEATD-GGVPSMTSTLMLEIIVLDENDNRPFFDNATYNFYL 1132
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 15/103 (14%)
Query: 95 HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAY 154
VTV+VLDENDN+PVF+ Y +S+ NV+ S + +V ATDAD D + +
Sbjct: 1756 QVTVNVLDENDNAPVFTNGPY-------TASIRENVA---SNSPVKTVMATDADLDTIIF 1805
Query: 155 KLAV--PSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEAHD 193
V ++L I TG++ G D S V Y+L ++A D
Sbjct: 1806 YSIVDGATDLFSIDSTTGQIRTRGVVDRESSAV-YQLQLQASD 1847
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 69/151 (45%), Gaps = 26/151 (17%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAE--THVTVDVLDENDNSPVFSQKVYRFIV 119
L+ T +D E AQ +L ITA+D +G+ T +T+D+ D ND PVF+Q Y
Sbjct: 558 LVTTREKLDHETAAQVTLTITASD-QGLEPMANTTILTIDIQDVNDEYPVFNQIAY---- 612
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVP--SNLVVIVPQTGELL 173
+ V + V ATD D GD V Y + S + + P++G L
Sbjct: 613 -------SETVEENSPARDLIQVLATDLDNGVNGD-VTYTFSSDQYSGMFSLDPESGLLQ 664
Query: 174 LTGDPPSDDVE---YELTVEAHDLQSPSRYA 201
+T P D E YEL + A D SPS A
Sbjct: 665 IT--VPLDREEQDSYELEILASDGGSPSLQA 693
Score = 40.8 bits (94), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 55/135 (40%), Gaps = 26/135 (19%)
Query: 32 ITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREE-VAQYSLVITATDVKGIN 90
I G D F NP T L++T G++D E Y L + AT+ +
Sbjct: 3260 IISGGDGTDFFTINPETG------------LILTQGNLDYETGKTTYHLTVAATNEQATM 3307
Query: 91 KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-G 149
HV V +L EN+ P F+Q Y F V + H + +G V ATD D G
Sbjct: 3308 VDYAHVIVTLLGENEFYPQFTQHQYDFYVNE----------HATDGAPVGVVLATDDDLG 3357
Query: 150 DK--VAYKLAVPSNL 162
D V Y SNL
Sbjct: 3358 DDGIVNYLFIGGSNL 3372
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 19/151 (12%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHV-TVDVLDENDNSPVFSQ 112
S ++ SG++ + G +DRE ++ + +TA D +++ T + V V D +DN PVF
Sbjct: 3166 SIDAVSGIVSLV-GSLDRETSDEHQIQVTAEDRAMYSQSATAILIVTVTDVDDNPPVFLP 3224
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVP----SNLVVIVP 167
+ YR V + + + +V+ATDAD G ++ + ++ I P
Sbjct: 3225 REYRADV----------FENSPSATPVVTVTATDADTGTNADFEYIISGGDGTDFFTINP 3274
Query: 168 QTGELLLTG--DPPSDDVEYELTVEAHDLQS 196
+TG +L G D + Y LTV A + Q+
Sbjct: 3275 ETGLILTQGNLDYETGKTTYHLTVAATNEQA 3305
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 20/91 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y+IT GN N+ F + S SGV+ T+ +DRE VA Y L + ATD
Sbjct: 2730 VSYAITLGNTNNAFDI-------------SSSGVI-TTTQPLDRETVASYILTVEATD-- 2773
Query: 88 GINKAETH---VTVDVLDENDNSPVFSQKVY 115
G N +++ V V V D NDN F+ K+Y
Sbjct: 2774 GGNPSQSGSAIVVVTVTDINDNRMSFT-KMY 2803
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 74/175 (42%), Gaps = 28/175 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y I G+ N F + + SGV+ T IDRE S +T V
Sbjct: 846 ITYVIVNGDPNGLFVI------------DFYSGVIKTTLS-IDREAHESASFRLTVLAVD 892
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G +T V +++LD NDN+PVF+ + V V +W + + TDA
Sbjct: 893 GSQNGQTVVEIEILDINDNAPVFALPEDQVDV----------VENWAVGNKFYAAQVTDA 942
Query: 148 DG---DKVAYKLAVP-SNLVVIVPQTGELLLTGDPPS-DDVEYELTVEAHDLQSP 197
D + + Y L+V + I +G L L D + + EY L ++A D +P
Sbjct: 943 DSPPNNVILYDLSVNFDDRFGINHTSGVLFLNKDLQNYPEKEYNLQIQATDYGTP 997
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 17/142 (11%)
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQKVYRFI 118
G ++T+G +DRE + Y L +T D G ++ A T V V+VLD NDN P FS Y
Sbjct: 2445 GGRILTTGLLDREVQSSYLLTVTVDD--GPSRLATTSVRVEVLDVNDNPPRFSPTSYTAT 2502
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPS---NLVVIVPQTGELLL 174
+ S F + ++ ATD D D A + ++ S + V+ TG ++
Sbjct: 2503 L--------PATSQQGCF--VAAIQATDTDLEDNAAIRYSITSGDTSKFVVDQDTGVVIT 2552
Query: 175 TGDPPSDDVEYELTVEAHDLQS 196
++ Y+L + A ++ S
Sbjct: 2553 AQGFTDENSPYDLQITAENVAS 2574
>gi|334311097|ref|XP_001377944.2| PREDICTED: protocadherin gamma-A12 [Monodelphis domestica]
Length = 894
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 69/128 (53%), Gaps = 23/128 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVTS +DRE+V+ Y++ +TATD+ TH+T+ V D NDN P FSQ Y +
Sbjct: 403 LVTSMALDREQVSMYNITVTATDLGTPPISTNTHITLHVADINDNPPTFSQTSYSVYI-- 460
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA------VP-SNLVVIVPQTGE 171
L +N K SSI V+A+D D + ++ Y +A VP S+ + I +TG
Sbjct: 461 ----LENN----PKGSSIFLVTASDPDSEENAQIIYTIADNIFQGVPLSSYISINSETGV 512
Query: 172 L--LLTGD 177
L LL+ D
Sbjct: 513 LYALLSFD 520
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + L++TA+D + + V V VLD NDN+PVF+Q VY + +
Sbjct: 193 LVLERALDREEEPVHHLILTASDGGNPVRSGTSRVRVTVLDANDNAPVFTQSVYSVSIPE 252
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
N V W + SV+ATD D
Sbjct: 253 -----NVPVGTW-----LLSVNATDPD 269
>gi|326673387|ref|XP_003199869.1| PREDICTED: protocadherin gamma-A6-like [Danio rerio]
Length = 810
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G++DRE +++Y++ ITATD + T ++ + V D NDN PVF Q+ YR V +
Sbjct: 405 LVTTGELDRELLSEYNITITATDEGSPPLSSTKNIQLTVADVNDNPPVFQQQNYRAHVQE 464
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ K SSI SVSATD D
Sbjct: 465 ----------NNKAGSSICSVSATDPD 481
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 83/175 (47%), Gaps = 34/175 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET---HVTVDVLDENDNSPVFSQKVYRFIV 119
LV + ++DRE+ + +L++TA D ++ T HVTV LD NDN+PVFSQ VY+ +
Sbjct: 195 LVLNKELDREQQKEVTLILTAVDGGTPPRSGTVAIHVTV--LDANDNAPVFSQAVYKVSL 252
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPS----NLVVIVPQTGEL 172
+ NS V + + +VSATDAD + V Y S L V+ +G +
Sbjct: 253 PE-----NSPVD-----TVVVTVSATDADEGQNGVVNYGFGHVSQKILQLFVLDSVSGVI 302
Query: 173 LLTGDPPSDDVE-YELTVEAHDLQSPSRYA-----------REPAQVWLQFNSPV 215
L G +D EL V+A D Q + Y+ P + NSP+
Sbjct: 303 KLIGTIDYEDESIIELPVQAKDGQGLASYSNVLIDIVDANDNAPIIILKSLNSPI 357
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 88/190 (46%), Gaps = 23/190 (12%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
+S SGV+ + G ID E+ + L + A D +G+ + ++V +D++D NDN+P+ K
Sbjct: 296 DSVSGVIKLI-GTIDYEDESIIELPVQAKDGQGL-ASYSNVLIDIVDANDNAPIIILK-- 351
Query: 116 RFIVGDLKSSLNSNVSHWK-KFSSIGSVSATDADGD-----KVAYKLAVPSNLVVIVPQT 169
SLNS + + +G ++ D D + + + + VP LV +
Sbjct: 352 ---------SLNSPIPESALPGTEVGIINVQDRDSENNGQVRCSIQQNVPFKLVPSIKNY 402
Query: 170 GELLLTGDPPSDDV-EYELTVEAHDLQSPSRYAREPAQVW---LQFNSPVLQDEQLLQMI 225
L+ TG+ + + EY +T+ A D SP + + Q+ + N PV Q + +
Sbjct: 403 YSLVTTGELDRELLSEYNITITATDEGSPPLSSTKNIQLTVADVNDNPPVFQQQNYRAHV 462
Query: 226 DRKSEAPHRI 235
++A I
Sbjct: 463 QENNKAGSSI 472
>gi|395504768|ref|XP_003756719.1| PREDICTED: protocadherin gamma-A4-like [Sarcophilus harrisii]
Length = 1616
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 118/259 (45%), Gaps = 49/259 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS+ G+ + L I S ++ + + +N F L++P SK+
Sbjct: 1134 ENSEPGSIIALLKIRDRDSGENGEVMCYF-----QENIPFKLESP----------SKNYY 1178
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIV 119
L+T G +DRE ++Y++ +TATD KG T TV ++ D NDN+PVF QK Y V
Sbjct: 1179 KLLTEGTLDREHTSEYNITVTATD-KGNPPLSTSKTVLLVVGDVNDNAPVFLQKSYMAYV 1237
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKL------AVP-SNLVVIVPQT 169
+ S +SI VSA D D +K ++Y + +P S+ V +
Sbjct: 1238 PENNPS----------GTSISCVSAVDPDLEKNGSLSYSIIWSDLPTLPLSSYVSVNGHR 1287
Query: 170 GELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSPVL-------QD 218
G++ + V +EL ++A D SP+ A +V++ N+P++ +
Sbjct: 1288 GDIFAQRSFDYEQVHTFELILQACDSGSPALCANVSVRVFIVDQNDNAPIILYPALGAEG 1347
Query: 219 EQLLQMIDRKSEAPHRIEK 237
L M+ R +E + + K
Sbjct: 1348 SALFDMVPRSAEPGYLVTK 1366
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE+ + + LV+ A D + + ++V+D NDN PVFSQ+VYR V +
Sbjct: 970 LVLKKSLDREQQSSHQLVLMALDGGQPAQNGTAQIRINVVDANDNVPVFSQQVYRVSVRE 1029
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ S+I VSATD D
Sbjct: 1030 ----------NLPPGSTILGVSATDQD 1046
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET---HVTVDVLDENDNSPVF 110
S S+SG LLV SG IDREE+ LV + D + + + HVTV VLD NDN P+F
Sbjct: 852 SISSQSGELLV-SGRIDREEICGRKLV-CSLDFETVAENPLNIFHVTVVVLDINDNPPIF 909
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE--THVTVDVLDENDNSPVFSQ 112
LVT +DRE+V+ Y++ +TATD +G TH+++ + D NDN PVF Q
Sbjct: 404 LVTDRALDREQVSMYNITVTATD-RGSPPLSTGTHISLHIEDINDNHPVFVQ 454
>gi|363745760|ref|XP_428051.3| PREDICTED: protocadherin beta-4 [Gallus gallus]
Length = 811
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 15/102 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHV-TVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DREE AQ+ +V+TA D TH +VD+ D NDN+PVF+Q Y V +
Sbjct: 398 LVTVSTLDREERAQHMVVVTAADAGSPPLTSTHTFSVDISDVNDNAPVFNQTSYTMYVHE 457
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPS 160
+N +G+V ATDAD KV+Y + VP+
Sbjct: 458 ------NNAPALL----VGAVKATDADAGPNAKVSYSV-VPA 488
>gi|47210012|emb|CAF94493.1| unnamed protein product [Tetraodon nigroviridis]
Length = 338
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 101/218 (46%), Gaps = 36/218 (16%)
Query: 6 SGTGVKGLPILVASSHKHP--HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLL 63
S + VKG V +H H +V+ I + N+N + +R+ T V L
Sbjct: 137 SESAVKGARYRVNDAHDADVGHNVVKQYILEKNNNFVLS--------VRDDTSGSKNVEL 188
Query: 64 VTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDL 122
V ++DRE LV+ A D ++ T + + VLD NDN+PVF Q VY
Sbjct: 189 VLDKELDRETEQNVHLVMVAVDGGNPQRSGTAAIQITVLDANDNAPVFEQAVY------- 241
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSN----LVVIVPQTGELLL 174
K+ + N + + + +VSA+DAD GD V Y+ + S+ + + +TGE+ +
Sbjct: 242 KADVPENAALG---TVVLTVSASDADEGVNGD-VIYEFSRISDKAKKVFTLDSKTGEIKV 297
Query: 175 TG--DPPSDDVEYELTVEAHD---LQSPSRYAREPAQV 207
+G D S+ YE+ ++A D L S R E +
Sbjct: 298 SGALDFESNS-HYEMRIDAKDGYGLSSDCRLMIEITDI 334
>gi|345787797|ref|XP_848507.2| PREDICTED: protocadherin Fat 3 isoform 9 [Canis lupus familiaris]
Length = 4557
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 15/117 (12%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
MENS V + I ++ + Y IT GN + FA+ +K+G
Sbjct: 1158 MENSPKDVSV--IQIQAEDPDSSSNEKLTYRITSGNPQNFFAIN------------TKTG 1203
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYR 116
++ TS +DRE+ A++ L +T TD K T V V VLDENDN P F +KVY+
Sbjct: 1204 LITTTSRKLDREQQAEHFLEVTVTDGGSSPKQSTIWVVVQVLDENDNKPQFPEKVYQ 1260
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 114/280 (40%), Gaps = 44/280 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYS+ G+ N F L +P + E++ T +DRE V YSL+ ATD
Sbjct: 3064 IRYSL-YGSGNAEFFL-DPESGELK------------TLALLDRERVPMYSLIARATDGG 3109
Query: 88 G-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
G +++ H+ ++ D NDN PVFS Y + + N + + + +V
Sbjct: 3110 GRFCQSDIHLILE--DVNDNPPVFSSDHY-------NTCVYENTATKALLTRVQAVDPDV 3160
Query: 147 ADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE--YELTVEAHDLQSPSRYAREP 204
KV Y LA +N + + +++ P + + Y ++V+A D QSP +
Sbjct: 3161 GINRKVVYSLADSANGFFSIDSSSGIIILEQPLDREQQPSYNISVQATD-QSPGQALSSL 3219
Query: 205 AQVWLQF-----NSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEM 259
A V + N PV + L + P AV T + D
Sbjct: 3220 ATVTITVLDINDNPPVFERRDYLVTV------PEDTSPGTQVLAVFATSK------DIGT 3267
Query: 260 EGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
I + + E+ +F+I + I+V E D + K++
Sbjct: 3268 NAEITYLIRSGNEQGRFRINPKTGGISVSEGLDYELCKKF 3307
Score = 45.1 bits (105), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 56/108 (51%), Gaps = 17/108 (15%)
Query: 15 ILVAS-SHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREE 73
+LVA + P+ +R+SI G+ ++ FA+ E G++ V +DRE
Sbjct: 3362 LLVAEDADSQPNGQIRFSIVNGDRDNEFAV------------EPVLGLVKVKK-KLDRER 3408
Query: 74 VAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
V+ YSL++ A D GI + V +D+ D NDNSPVF+ Y ++
Sbjct: 3409 VSGYSLLVQAVD-SGIPVMSSTATVNIDISDVNDNSPVFTPANYTAVI 3455
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 23/187 (12%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y + GN + F + NP SGV+ T +D E + Y L++ AT++ G+
Sbjct: 1703 YEVKDGNIDGIFTV-NP-----------YSGVI-TTRKALDYERTSSYQLIVQATNMAGM 1749
Query: 90 NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
T V + ++DENDN+PVF Y G L + N +S + ATDAD
Sbjct: 1750 ASNAT-VNIQIVDENDNAPVFLFSQYS---GSLSEAAPVNSIVRSLDNSPLVIRATDADS 1805
Query: 150 DK---VAYKL--AVPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPSRYARE 203
++ + Y++ + + TG + + + + + V D SP A
Sbjct: 1806 NRNALLVYQIVESTAKKFFTVDSSTGAIRTIANLDHETIAHFHFHVHVRDSGSPQLTAES 1865
Query: 204 PAQVWLQ 210
P +V ++
Sbjct: 1866 PVEVNIE 1872
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 124/311 (39%), Gaps = 57/311 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E S GT V L ++ + ++LV Y I Q N T +S SG+
Sbjct: 2298 EASLIGTPV--LQVVSTDADSENNKLVHYQIVQDTYNSTDYFH----------IDSASGL 2345
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIV 119
+L T+ +D E V L I ATD G + V V + D NDN P+F+Q +Y V
Sbjct: 2346 IL-TARMLDHESVQHCILKIRATD-NGFPSLSSEVLVHIYISDINDNPPIFNQLIYESYV 2403
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGELLLT- 175
+L H+ + V A+DAD D++ Y + ++ + + ++T
Sbjct: 2404 SELAPR-----GHF-----VTCVQASDADSSDFDRLEYSILSGNDRTSFLMDSKSGIITL 2453
Query: 176 GDPPSDDVE--YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPH 233
+ +E Y L V D S AQV ++ L S++ +
Sbjct: 2454 SNHRKQRMEPLYSLNVSVSDGLFTST-----AQVHIRVLGANLYSPAF-------SQSTY 2501
Query: 234 RIEKRRVTRAVRPTKRIDFSETDGE--MEGRIVFALEKETEREKFKIRDENPWITVDENG 291
E R A TK I TDG+ G+I +A+ + +++F I D NG
Sbjct: 2502 VAEVRE--NAAAGTKVIHVRATDGDPGAYGQISYAIINDFAKDRFLI---------DNNG 2550
Query: 292 DVRVKKRWDFE 302
V +R D E
Sbjct: 2551 QVITTERLDRE 2561
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 53 NSTESKSGV-LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS 111
+S +++ GV +V + +D E+ + Y++ + TD G N A T V + VLD NDN P FS
Sbjct: 1404 SSFDAEKGVGTIVIAKPLDAEQRSIYNMSVEVTD--GTNVAVTQVFIKVLDNNDNGPEFS 1461
Query: 112 QKVY 115
Q Y
Sbjct: 1462 QLNY 1465
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 65/150 (43%), Gaps = 29/150 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT GN FAL +S+ V + +DREE Y L ITATD
Sbjct: 2960 VSYHITGGNPRGRFAL---------GLVQSEWKVYV--KRPLDREEQDIYFLNITATD-- 3006
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G+ + V V V D NDN+PV Q Y + + SN I VSA DA
Sbjct: 3007 GLFVTQAMVEVTVSDVNDNNPVCDQVAYTAL---FPEDIPSN-------KIILKVSAKDA 3056
Query: 148 D----GDKVAYKLAVPSNLVVIV-PQTGEL 172
D GD + Y L N + P++GEL
Sbjct: 3057 DIGSNGD-IRYSLYGSGNAEFFLDPESGEL 3085
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 72/167 (43%), Gaps = 21/167 (12%)
Query: 43 LKNPTTHEIRN-----STESKSGVLLVTSGDIDREEVAQYSLVITAT-DVKGINKAETHV 96
L P + I N +S SGV+ T DREE Y LV+ A+ ++ + A V
Sbjct: 2011 LNEPLKYSILNPGNKFKIKSTSGVIQTTGVPFDREEQELYELVVEASRELDHLRVARVVV 2070
Query: 97 TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVA 153
V++ D NDNSPVF Y V + + I V+A D D +V
Sbjct: 2071 RVNIEDINDNSPVFVGLPYYAAVQ----------VDAEPGTLIYQVTAIDKDKGANGEVT 2120
Query: 154 YKLAVPSNLVVIVPQTGELLLTGDPPSD--DVEYELTVEAHDLQSPS 198
Y L I P +G ++L SD ++EY +TV A D PS
Sbjct: 2121 YVLQDDYGHFEINPNSGNVILKEAFNSDLSNIEYGVTVLAKDGGKPS 2167
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 18/122 (14%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ GT V L + S + + Y I GN+ F + NP K+G
Sbjct: 3247 EDTSPGTQV--LAVFATSKDIGTNAEITYLIRSGNEQGRFRI-NP-----------KTGG 3292
Query: 62 LLVTSGDIDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+ V+ G +D E ++ LV+ A D ++ T V++++ D NDN P FSQ VY ++
Sbjct: 3293 ISVSEG-LDYELCKKFYLVVEAKDGGTPALSAVAT-VSINLTDVNDNPPRFSQDVYSAVI 3350
Query: 120 GD 121
+
Sbjct: 3351 SE 3352
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVY 115
+GVL V S +D E + Y L + A+D + A VTVD+L D NDN P+F Q Y
Sbjct: 2237 TGVLKVVS-PLDYEIASVYKLTVRASD--ALTGARAEVTVDLLVNDVNDNPPIFDQPTY 2292
>gi|301770721|ref|XP_002920779.1| PREDICTED: protocadherin Fat 3-like [Ailuropoda melanoleuca]
Length = 4557
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 15/117 (12%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
MENS V + I ++ + Y IT GN + FA+ +K+G
Sbjct: 1158 MENSPKDVSV--IQIQAEDPDSSSNEKLTYRITSGNPQNFFAIN------------TKTG 1203
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYR 116
++ TS +DRE+ A++ L +T TD K T V V VLDENDN P F +KVY+
Sbjct: 1204 LITTTSRKLDREQQAEHFLEVTVTDGGSSPKQSTIWVVVQVLDENDNKPQFPEKVYQ 1260
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 56/108 (51%), Gaps = 17/108 (15%)
Query: 15 ILVAS-SHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREE 73
+LVA + P+ +R+SI G+ ++ FA+ E G++ V +DRE
Sbjct: 3362 LLVAEDADSQPNGQIRFSIVNGDRDNEFAV------------EPVLGLVKVKK-KLDRER 3408
Query: 74 VAQYSLVITATDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIV 119
V+ YSL++ A D GI + TV D+ D NDNSPVF+ Y ++
Sbjct: 3409 VSGYSLLVQAVD-SGIPAMSSTATVNIDISDVNDNSPVFTPANYTAVI 3455
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 114/280 (40%), Gaps = 44/280 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYS+ G+ N F L +P + E++ T +DRE V YSL+ ATD
Sbjct: 3064 IRYSL-YGSGNDEFFL-DPESGELK------------TLALLDRERVPMYSLIARATDGG 3109
Query: 88 G-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
G +++ H+ ++ D NDN PVFS Y + + N + + + +V
Sbjct: 3110 GRFCQSDIHLILE--DVNDNPPVFSSDHY-------NACVYENTATKALLTRVQAVDPDV 3160
Query: 147 ADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE--YELTVEAHDLQSPSRYAREP 204
KV Y LA +N + + +++ P + + Y ++V+A D QSP +
Sbjct: 3161 GINRKVVYSLADSANGFFSIDSSSGIIILEQPLDREQQPSYNISVQATD-QSPGQALSSL 3219
Query: 205 AQVWLQF-----NSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEM 259
A V + N PV + L + P AV T + D
Sbjct: 3220 ATVTITVLDINDNPPVFERRDYLVTV------PEDTSPGTQVLAVFATSK------DIGT 3267
Query: 260 EGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299
I + + E+ +F+I + I+V E D + K++
Sbjct: 3268 NAEITYLIRSGNEQGRFRINPKTGGISVSEVLDYELCKKF 3307
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 23/187 (12%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y + GN + F + NP SGV+ T +D E + Y L++ AT++ G+
Sbjct: 1703 YEVKDGNIDGIFTI-NP-----------YSGVI-TTRKALDYERTSSYQLIVQATNMAGM 1749
Query: 90 NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
T V + ++DENDN+PVF Y G L + N +S + ATDAD
Sbjct: 1750 ASNVT-VNIQIVDENDNAPVFLFSQYS---GSLSEAAPVNSIVRSLDNSPLVIRATDADS 1805
Query: 150 DK---VAYKL--AVPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPSRYARE 203
++ + Y++ + + TG + + + + + V D SP A
Sbjct: 1806 NRNALLVYQIVESTAKKFFTVDSSTGAIRTIANLDHETIAHFHFHVHVRDSGSPQLTAES 1865
Query: 204 PAQVWLQ 210
P +V ++
Sbjct: 1866 PVEVNIE 1872
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 66/150 (44%), Gaps = 29/150 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT GN FAL +S+ V + +DREE Y L ITATD
Sbjct: 2960 VSYHITGGNPRGRFAL---------GLVQSEWKVYV--KRPLDREEQDIYFLNITATD-- 3006
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G+ + V V V D NDNSPV Q Y + ++SN I VSA DA
Sbjct: 3007 GLFVTQAMVEVTVSDVNDNSPVCEQVAYTAL---FPEDISSN-------KIILKVSAKDA 3056
Query: 148 D----GDKVAYKLAVPSN-LVVIVPQTGEL 172
D GD + Y L N + P++GEL
Sbjct: 3057 DIGSNGD-IRYSLYGSGNDEFFLDPESGEL 3085
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 53 NSTESKSGV-LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFS 111
+S +++ GV +V + +D E+ + Y++ + TD G N A T V + VLD NDN P FS
Sbjct: 1404 SSFDAEKGVGTIVIAKPLDAEQRSIYNMSVEVTD--GTNVAVTQVFIKVLDNNDNGPEFS 1461
Query: 112 QKVY 115
Q Y
Sbjct: 1462 QPNY 1465
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 69/160 (43%), Gaps = 29/160 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E S GT V L ++ + ++LV Y I Q N T +S SG+
Sbjct: 2298 EASLIGTPV--LQVVSTDADSENNKLVHYQIVQDTYNSTDYFH----------IDSASGL 2345
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIV 119
+L T+ +D E V L + ATD G + V V + D NDN PVF+Q +Y V
Sbjct: 2346 IL-TARMLDHELVQHCILKVRATD-NGFPSLSSEVLVHIYISDINDNPPVFNQLIYESYV 2403
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
+L H+ + V A+DAD D++ Y +
Sbjct: 2404 SELAPR-----GHF-----VTCVQASDADSSDFDRLEYSI 2433
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 72/167 (43%), Gaps = 21/167 (12%)
Query: 43 LKNPTTHEIRN-----STESKSGVLLVTSGDIDREEVAQYSLVITAT-DVKGINKAETHV 96
L P + I N +S SGV+ T DREE Y LV+ A+ ++ + A V
Sbjct: 2011 LNEPLKYSILNPGNKFKIKSTSGVIQTTGVPFDREEQELYELVVEASRELDHLRVARVVV 2070
Query: 97 TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVA 153
V++ D NDNSPVF Y V + + I V+A D D +V
Sbjct: 2071 RVNIEDINDNSPVFVGLPYYAAVQ----------VDAEPGTLIYQVTAIDKDKGANGEVT 2120
Query: 154 YKLAVPSNLVVIVPQTGELLLTGDPPSD--DVEYELTVEAHDLQSPS 198
Y L I P +G ++L SD ++EY +TV A D PS
Sbjct: 2121 YILQDDYGHFEINPNSGNVILKEAFNSDLSNIEYGVTVLAKDGGKPS 2167
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 15/88 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSI GND +F + +SKSGV+ +++ R E YSL ++ +D
Sbjct: 2429 LEYSILSGNDRTSFLM------------DSKSGVITLSNHRKQRME-PLYSLNVSVSD-- 2473
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVY 115
G+ + V + VL N SP FSQ Y
Sbjct: 2474 GLFTSTAQVHIRVLGANLYSPAFSQSTY 2501
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVY 115
+GVL V S +D E + Y L + A+D + A VTVD+L D NDN P+F Q Y
Sbjct: 2237 TGVLKVVS-PLDYEITSVYKLTVRASD--ALTGARAEVTVDMLVNDVNDNPPIFDQPTY 2292
>gi|402872838|ref|XP_003900306.1| PREDICTED: protocadherin gamma-B2 [Papio anubis]
Length = 824
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 34/206 (16%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQK 113
+ SK+ L+T G +DREE+ +Y+L ITATD K + VT+ + D NDN+P+F Q
Sbjct: 409 SSSKNYYKLITDGALDREEIPEYNLTITATDGGKPPLSSSIIVTLHISDVNDNAPLFQQT 468
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL-------- 162
Y V + + +SI +SA+D D +V+Y + V S+L
Sbjct: 469 CYMVHVAE----------NNPPGASIAQISASDPDLGPNGQVSYSI-VASDLEPREILSY 517
Query: 163 VVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVL-- 216
V + Q+G + + + +ELT++A D SP+ A +V L N P++
Sbjct: 518 VSLSAQSGVVFAQRAFDHEQLRAFELTLQATDQGSPALSANVSLRVLVGDLNDNVPLVLY 577
Query: 217 -----QDEQLLQMIDRKSEAPHRIEK 237
L M+ R +E + + K
Sbjct: 578 PALGPDGSALFDMVPRAAEPGYLVTK 603
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++K GT P L S P+ L RY + NDN F L T + R E
Sbjct: 157 ESTKPGTTFPLDPAL--DSDVGPNSLQRYHL---NDNEYFDLAEKQTPDGRKYPE----- 206
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYR 116
L+ +DREE + + LV+TA D ++ T + + V D NDN PVFSQ VYR
Sbjct: 207 -LILKHSLDREEHSFHQLVLTAVDGGDPPQSGTTQIRIQVTDANDNPPVFSQDVYR 261
>gi|426350289|ref|XP_004042712.1| PREDICTED: protocadherin alpha-13 isoform 2 [Gorilla gorilla
gorilla]
Length = 807
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 22/157 (14%)
Query: 48 THEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDN 106
T + +NS E S + LV +DREE+ ++SL++TA+D K + + +LD NDN
Sbjct: 179 TLDAQNSLEQMSSLSLVLRKTLDREEIQEHSLLLTASDGGKPELTGTVQLLITILDVNDN 238
Query: 107 SPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNL 162
+P F Q VY+ V L+++ N + + ++ATD D GD + Y P +
Sbjct: 239 APEFYQSVYKVTV--LENAFNGTL--------VIKLNATDPDDGTNGD-IVYSFRRPVSP 287
Query: 163 VVIV-----PQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ P GE+ G ++ + YE++VEA D
Sbjct: 288 AVVYAFTINPNNGEIRTKGKLDFEEKKLYEISVEAVD 324
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE V+ Y LV+TA D + A V+V V D NDN+P F+Q Y V +
Sbjct: 407 LVLDSALDRESVSAYELVVTARDGGSPSLWATASVSVGVADVNDNAPAFAQPEYTVFVKE 466
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKL 156
N H I +VSA DAD + V+Y L
Sbjct: 467 ----NNPPGCH------IFTVSAQDADAQENALVSYSL 494
>gi|47196998|emb|CAF87261.1| unnamed protein product [Tetraodon nigroviridis]
Length = 166
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 87/177 (49%), Gaps = 39/177 (22%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKG 88
RY I Q NDN ++ N V LV +DRE+ + +L++TA D
Sbjct: 13 RY-ILQKNDNFILSVDNKK-------------VELVLENKLDREKQKEINLLLTALDGGS 58
Query: 89 INKAET---HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
++ T HVTV LD NDN+PVFSQ VY K+SL N + + VSAT
Sbjct: 59 PQRSGTVVIHVTV--LDANDNAPVFSQAVY-------KASLPEN---SPPDTIVMQVSAT 106
Query: 146 DAD----GDKVAYKLAVPS----NLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
DAD GD V Y L S N+ +I ++GE+ ++G ++ +E+ V+A D
Sbjct: 107 DADEGVNGD-VTYNLGHTSDDDANIFMIDSKSGEIRVSGTVDFEESNSFEMRVQAKD 162
>gi|432858179|ref|XP_004068831.1| PREDICTED: cadherin-22-like [Oryzias latipes]
Length = 803
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 20/118 (16%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGIN---KAETHVTVDVLDENDNSPVFSQKVY 115
+G+++ D+DRE +Y LV+ ATD+ G T VT+ + D NDN P F QK+Y
Sbjct: 215 TGIIMTAVADLDRETQDRYELVVKATDMAGQMGGLSGSTTVTIVITDVNDNPPRFPQKMY 274
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELL 173
+F V S + V + +G V ATDAD + +++ ++ + GEL
Sbjct: 275 QFSV-----SEGAAVG-----TPVGRVIATDAD-------MGENTDMSYLIREGGELF 315
>gi|332234696|ref|XP_003266542.1| PREDICTED: protocadherin alpha-13 [Nomascus leucogenys]
Length = 807
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 22/157 (14%)
Query: 48 THEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDN 106
T + +NS E S + LV +DREE+ ++SL++TA+D K + + +LD NDN
Sbjct: 179 TLDAQNSLEQMSSLSLVLRKTLDREEIQEHSLLLTASDGGKPELTGTVQLLITILDVNDN 238
Query: 107 SPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNL 162
+P F Q VY+ V L+++ N + + ++ATD D GD + Y P +
Sbjct: 239 APEFYQSVYKVTV--LENAFNGTL--------VIKLNATDPDDGTNGD-IVYSFRRPVSP 287
Query: 163 VVIV-----PQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ P GE+ G ++ + YE++VEA D
Sbjct: 288 AVVYAFTINPNNGEIRTKGKLDFEEKKLYEISVEAVD 324
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE V+ Y LV+TA D + A V+V V D NDN+P F+Q Y V +
Sbjct: 407 LVLDRALDRESVSAYELVVTARDGGSPSLWATASVSVGVADVNDNAPAFAQPEYTVFVKE 466
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKL 156
N H I +VSA DAD + V+Y L
Sbjct: 467 ----NNPPGCH------IFTVSAQDADAQENALVSYSL 494
>gi|42490953|gb|AAH66178.1| Protocadherin beta 15 [Mus musculus]
Length = 786
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 111/254 (43%), Gaps = 47/254 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +DRE +Y++ IT TD+ GI + T +TV V D NDN+P F+Q Y V
Sbjct: 403 LVTEKPLDRESNTEYNITITVTDM-GIPRLTTQHTITVQVSDINDNAPTFTQTSYTMFVC 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVP-------SNLVVIVPQTG 170
+ NS H IG++SATD+D + Y L +P +L+ I G
Sbjct: 462 E----NNSPALH------IGTISATDSDSGSNAHITYSLRLPHDPQLALDSLISINADNG 511
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQMID 226
+L + ++ +E V A D SP+ ++ +V + N+P + L M
Sbjct: 512 QLFALRALDYEALQAFEFHVGAIDQGSPALSSQALVRVVILDDNDNAPFV----LYPM-- 565
Query: 227 RKSEAPHRIEKRRVTRAVRP---TKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENP 283
+ + AP+ + RA P ++ + D + F L K TE F +
Sbjct: 566 QNASAPY---TELLPRAAEPGYLVTKVVAVDRDSGQNAWLSFQLLKATEPGLFSV----- 617
Query: 284 WITVDENGDVRVKK 297
W NG+VR +
Sbjct: 618 WA---HNGEVRTTR 628
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE+ +++L +TA D ++ T V + VLD NDNSP F Q +Y+
Sbjct: 194 LVLDKMLDREEIPEFTLTLTALDGGSPPRSGTALVQILVLDINDNSPQFVQSLYK----- 248
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVV----IVPQTGELLL 174
++S N+ V S + +VSA D D ++ Y + ++ I +GEL L
Sbjct: 249 VQSPENTPVG-----SLVVAVSARDLDTGSYGQIDYTFFYATERILQTFQINSTSGELYL 303
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+ + ++ Y +T++A D
Sbjct: 304 KRELNYEAIQTYSITIQARD 323
>gi|157820663|ref|NP_001102860.1| protocadherin beta 9 [Rattus norvegicus]
gi|149017296|gb|EDL76347.1| rCG49486 [Rattus norvegicus]
Length = 798
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 69/148 (46%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ I+ +D+ H +TV V D NDN+P F+Q Y V +
Sbjct: 408 LVTESPLDRESRAEYNITISVSDLGTPRLTTQHTITVQVSDINDNAPAFTQTSYTMFVRE 467
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSN-------LVVIVPQTGE 171
NS H IG++SATDAD + Y L P N L+ I G+
Sbjct: 468 ----NNSPALH------IGTISATDADSGSNAHITYSLLPPQNPQLALVSLISINADNGQ 517
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 518 LFALRALDYEALQAFEFYVGATDQGSPA 545
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 45 NPTTHEI-RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLD 102
NP H + RN++E K LV +DREE A+ SL + A D ++ T V + ++D
Sbjct: 180 NPHFHVLTRNNSEGKKYPELVQDRALDREEQAELSLTLIALDGGSPPRSGTALVRILIID 239
Query: 103 ENDNSPVFSQKVY 115
NDN+P F Y
Sbjct: 240 INDNAPEFVNSPY 252
>gi|449475306|ref|XP_002191783.2| PREDICTED: protocadherin beta-4-like [Taeniopygia guttata]
Length = 944
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
VR + N + AL++ + +R + K+ LVT +DREE QY L +TA D
Sbjct: 496 VRDRDSGANGKISCALEDQLSFSLRPAY--KNYYELVTVSALDREETPQYILSVTAADAG 553
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
T TVD+ D NDN+PVF+Q Y V + +NV +G+VSA D
Sbjct: 554 SPPLTSTQTFTVDISDVNDNAPVFNQTSYTMYVRE------NNVPTVF----VGAVSAGD 603
Query: 147 AD---GDKVAYKLA 157
AD KV Y LA
Sbjct: 604 ADVGLNAKVTYSLA 617
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 72/145 (49%), Gaps = 19/145 (13%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYR 116
K + LV +DREE A+ + A D ++ T V +D+LD NDN+P+F+Q+ Y
Sbjct: 314 KKSLELVLEKPLDREEHAEMGFSVIALDGGSPPRSGTTQVKIDILDVNDNAPIFTQEEY- 372
Query: 117 FIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP----SNLVVIVPQT 169
+ + + + S + +V ATD D K++Y+ + + VI P T
Sbjct: 373 ---------IAQVLENMPEGSVVLTVLATDRDAGINGKISYQFSQAVGQSDSAFVIDPIT 423
Query: 170 GELLLTGDPPSDDVE-YELTVEAHD 193
GE+ LT + VE +ELTV A D
Sbjct: 424 GEIKLTKPLDFEAVETHELTVRARD 448
>gi|397518014|ref|XP_003829195.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-2 [Pan paniscus]
Length = 798
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 54/104 (51%), Gaps = 14/104 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV S +DRE ++Y++ IT TD K E ++TV V D NDN+P F+Q Y V +
Sbjct: 405 LVISTALDRETRSEYNITITVTDFGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRE 464
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNL 162
NS H IGSVSATD D +V Y L P +L
Sbjct: 465 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDL 498
>gi|315221136|ref|NP_001186725.1| protocadherin-8-like precursor [Xenopus laevis]
gi|77798553|gb|ABB03451.1| protocadherin PCNS [Xenopus laevis]
Length = 977
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 16/100 (16%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIV 119
++VT+ +DRE++A+Y+L I A D+ G T + TV V+DENDN+P+FS+ Y
Sbjct: 407 MVVTTTTLDREKIAEYTLTIVAEDL-GFPTLSTKKYYTVKVIDENDNAPLFSKPEYEV-- 463
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKL 156
S L +N S I +V A D+D D KV YKL
Sbjct: 464 ----SILENN----SPGSYIATVVARDSDTDHNGKVTYKL 495
>gi|449498435|ref|XP_002191035.2| PREDICTED: protocadherin-11 X-linked-like [Taeniopygia guttata]
Length = 1231
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 15/104 (14%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVY 115
++G+L +DRE+ +YS + A D G+ +T+ VTV VLD+NDNSP F+ Y
Sbjct: 518 RTGILTAVR-KLDREKQDRYSFTVLAKD-NGMPPLQTNATVTVSVLDQNDNSPAFTHNEY 575
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAV 158
F V + + + ++G ++ TDAD GD A L++
Sbjct: 576 NFYVPE----------NLPMYGTVGLITVTDADAGDNAAVTLSI 609
>gi|345486640|ref|XP_003425515.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-15-like [Nasonia
vitripennis]
Length = 1618
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 78/178 (43%), Gaps = 30/178 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI GND FA+ + KSGV+ V +DRE++ +Y L+I A D
Sbjct: 675 VSYSIVSGNDLRQFAIGD------------KSGVITVIR-KLDREDLTRYQLIIKAEDTG 721
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G++ T V + V D ND +P F Y F +V + IG V A DA
Sbjct: 722 GLSSTCT-VNIKVTDINDKNPEFEGLPYEF-----------SVKEGEARKLIGRVHAEDA 769
Query: 148 D-GDKVAYKLAVPSNLVVIV-PQTGELL--LTGDPPSDDVEYELTVEAHDLQSPSRYA 201
D G P ++ V P+TG++L L D + EY+ V A D R A
Sbjct: 770 DEGINAEITYFAPDDIPFTVDPETGDVLTKLALDYEQNH-EYKFVVTARDGAPDPRLA 826
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 28/174 (16%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + YSI ++N K + KSG L+ + G ++ E QYS+ + A
Sbjct: 570 PNAEITYSIYHVSNNGLQKFK----------IDPKSG-LIESVGKLNAGE--QYSITVQA 616
Query: 84 TDVKGINKAETHVTVDVL-DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
TD G ++T V V+V+ N SPVF Q+VY V + +S+NS V+ ++
Sbjct: 617 TD-NGGKYSQTIVEVNVIPGPNTRSPVFQQQVYEVQVSE-GASINSTVA---------TI 665
Query: 143 SATDADGDKVAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EYELTVEAHD 193
A D + D V+Y + ++L I ++G + + +D+ Y+L ++A D
Sbjct: 666 IAVDPENDPVSYSIVSGNDLRQFAIGDKSGVITVIRKLDREDLTRYQLIIKAED 719
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 14/112 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ +GT +K L ++ ASS L+ I +GN+ F N TE K+
Sbjct: 1067 EDAPAGTLIKVLSVINASSRDA--SLLDCEIYEGNEERLFR---------ANITEEKNCA 1115
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVT---VDVLDENDNSPVF 110
L + ++D E Y + I G+ K+ ++T + V+D NDN P F
Sbjct: 1116 LWLEKPELDFESTESYQIKIRLQAAAGLIKSGRNITMVKIQVVDVNDNKPEF 1167
>gi|291230194|ref|XP_002735053.1| PREDICTED: hedgling-like [Saccoglossus kowalevskii]
Length = 2498
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/103 (42%), Positives = 61/103 (59%), Gaps = 17/103 (16%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
+G L VT G++DRE Y L ITA D K I++ +T V +++ D NDN+P F+Q+VY
Sbjct: 616 TGELYVT-GELDRERTPFYILNITACDNGKTISQTKTTVIIEISDVNDNAPSFTQEVYS- 673
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKL 156
G+L+ +LN+ S I SVSA D D GD + YKL
Sbjct: 674 --GNLQENLNNG-------SYIISVSAEDPDSGSNGD-IIYKL 706
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 15/126 (11%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKG---INKAETHVTVDVLDENDNSPVFSQKV 114
+G + + D+D E+ A Y+L +TA+D G ++ + + + D NDN+PVF Q +
Sbjct: 508 STGEITTDNKDLDYEDTAIYNLTVTASDCNGGPGSLQSNASIVIQINDRNDNAPVFEQFL 567
Query: 115 YRFIV---GDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGE 171
Y +I+ ++ S++S V++ G V DGD +K I TGE
Sbjct: 568 YEYILEEDTEIGHSVDSLVANDLDDELNGRVDYYLEDGDHGDFK---------INKYTGE 618
Query: 172 LLLTGD 177
L +TG+
Sbjct: 619 LYVTGE 624
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 81/154 (52%), Gaps = 21/154 (13%)
Query: 57 SKSGVLLVT-SGD--IDREEVAQYSLVITATDVKGINKAETH---VTVDVLDENDNSPVF 110
S++ ++ + SGD +DRE QY L +TA+D G + + + VT+ +LD NDN P F
Sbjct: 1254 SRTAIITTSHSGDPGLDRETNKQYELQVTASDRNGEHNSLSSMRTVTITILDVNDNHPQF 1313
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDK--VAYKLAVPS-NLVVIV 166
Q+ Y++ S+ NV + I +++ATDAD G+ ++Y + S I
Sbjct: 1314 EQQTYKY-------SIEENV---RVGFVIDTLTATDADEGNNAIISYSIVNGSKGKFRIE 1363
Query: 167 PQTGELLLTGDPPSDD-VEYELTVEAHDLQSPSR 199
+G+L L G+ ++ YE+ + A+D P R
Sbjct: 1364 RSSGQLTLMGELDREETARYEINISANDHGVPIR 1397
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 29/192 (15%)
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLA 157
+ VLD NDNSP F+ VY V D S ++++V+ +I +A + Y L+
Sbjct: 441 ITVLDVNDNSPHFTSDVYTGFV-DENSDVDASVTMITPIQAIDKDEGMNA---AITYSLS 496
Query: 158 -VPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVWLQF- 211
+ S + + TGE +T D D E Y LTV A D + A + +Q
Sbjct: 497 GLGSEMFRMNQSTGE--ITTDNKDLDYEDTAIYNLTVTASDCNGGPGSLQSNASIVIQIN 554
Query: 212 ----NSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFAL 267
N+PV + +++ +E H ++ ++ D E+ GR+ + L
Sbjct: 555 DRNDNAPVFEQFLYEYILEEDTEIGHSVDSLVA------------NDLDDELNGRVDYYL 602
Query: 268 EKETEREKFKIR 279
E + + FKI
Sbjct: 603 E-DGDHGDFKIN 613
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 88/207 (42%), Gaps = 41/207 (19%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS +GT V + S+ + + Y +Q N IRN +
Sbjct: 1106 LENSPAGTNVTRV-----SAEGYDGYNILYDFSQSN--------------IRNFNINNYT 1146
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKG-----INKAETHVTVDVLDENDNSPVFSQKVY 115
++ T+ +DRE YS I A ++G + + + VLDENDNSP F + Y
Sbjct: 1147 GVVTTTELLDRETRDTYSYEIVA-KLEGESACLFDPVVAEILITVLDENDNSPQFLETSY 1205
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGEL 172
+ D SS N+ V+ K + ATD D D + Y L+ + ++ +
Sbjct: 1206 SGTI-DENSSSNTVVTMTKD------IHATDIDSDYNALIVYTLSGIGHEKFMINSRTAI 1258
Query: 173 LLT---GDPPSD---DVEYELTVEAHD 193
+ T GDP D + +YEL V A D
Sbjct: 1259 ITTSHSGDPGLDRETNKQYELQVTASD 1285
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 67 GDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYR 116
G IDRE A YSL++ ATD G+ + T+V + V D NDN+P F+ Y
Sbjct: 1770 GPIDREYKASYSLIVMATD-NGLPSRNSTTNVQISVGDVNDNAPTFTLPYYH 1820
>gi|242397499|ref|NP_001101014.2| dachsous 1 precursor [Rattus norvegicus]
Length = 3291
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVIT 82
H V YSI GN F L+ P E+ + L LV +D E + QY+L +T
Sbjct: 2508 HATVDYSIISGNRGRVFQLE-PRLAEVGDGVGPGPQALGCLVLLEPLDFESLTQYNLTVT 2566
Query: 83 ATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
A D + + VTV VLD NDN PVF++ YR V
Sbjct: 2567 AADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRVTV 2604
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+G +D E+ Y L + A D G ++ ++TV V D NDN P+FSQ +Y+ ++
Sbjct: 2327 TGPLDFEQCDHYHLQLLAHD--GPHEGHANLTVLVEDVNDNVPIFSQSLYQVMM------ 2378
Query: 126 LNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDD 182
+ H S+I SVSATD D ++Y LA P+ + G L T +
Sbjct: 2379 ----LEHTPPGSAILSVSATDRDSGANGHISYHLASPAEGFSVDTNNGTLFTTVGAMALG 2434
Query: 183 VE----YELTVEAHDLQSPSRYAREPAQVWLQ 210
E ++ +EA D +P R A+ V L+
Sbjct: 2435 HEGPGVVDVVLEARDHGAPGRSAQATVHVQLK 2466
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 93/235 (39%), Gaps = 29/235 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHV--TVDVLDENDNSPVFSQKVYRFIVG 120
L T+ +DRE A Y+ +TA D T V TV V D ND++P F R +
Sbjct: 1904 LSTATALDREHCASYAFSVTAVDGAAAGPLSTTVPITVTVRDVNDHAPAFPTSPLRLRLP 1963
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA-VPSNLVVIVPQTGELLLTG 176
SLN K ++ ++ A D D + Y+LA P + TGE+ +
Sbjct: 1964 RPGPSLN------KPTLALATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVAR 2017
Query: 177 DP----PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
P P D V L + A DL P+R A V +Q + E+ + +EA
Sbjct: 2018 SPAALGPRDRV---LFIVATDLGRPARSATGVVIVGIQG-----EPERGPRFPRANNEAV 2069
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
R T + P + G G I +++ ER F I+ ITV
Sbjct: 2070 LRENAPPGTPVISPK-----AVHSGGSNGPITYSILSGNERGIFSIQPSTGTITV 2119
Score = 45.4 bits (106), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 84/207 (40%), Gaps = 26/207 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V + P+ + YS+ Q +++ +P T E+
Sbjct: 1110 ENQPPGTSVGR--VFATDKDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEV---------- 1157
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
T +DRE+ + + L++ D ++ T V V VLD NDNSP F Q G
Sbjct: 1158 --TTLQTLDREQQSSFQLLVQVQDAGSPPRSATGTVHVAVLDLNDNSPTFLQ-ASGAAGG 1214
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKL-AVPSNLVVIVPQTGEL-----LL 174
L + V +++ + + + + Y L S L + P TGEL L+
Sbjct: 1215 GLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGSGSELFSLHPHTGELHTAASLI 1274
Query: 175 TGDPPSDDVEYELTVEAHDLQSPSRYA 201
+ P Y LT+ AHD SP R A
Sbjct: 1275 RAERP----HYVLTLSAHDQGSPPRSA 1297
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 13/87 (14%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LV ++++ G+ F L + SG L + +D E AQ+ LV+ A
Sbjct: 2626 PHGLVHFTLSSGDPLGLFEL------------DENSGALRLAH-PLDCETQAQHQLVVQA 2672
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVF 110
D G + A VTV+V D ND+ P F
Sbjct: 2673 ADPAGTHFALVPVTVEVQDVNDHGPAF 2699
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 400 EGGEGH-FAL----------STQDSVIYLVCVARRLDREERDVYNLRVTATDSGSPPLRA 448
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + V D NDN+P F +++YR
Sbjct: 449 EAAFVLHVTDVNDNAPAFDRQLYR 472
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 23/157 (14%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFS 111
S + SGVL T +DREE + +L + A D +G+ TH+TV V DEND+SP F
Sbjct: 1688 SLDPNSGVL-TTLRALDREEQEEINLTVYARD-RGLPPLLTHITVRVTVEDENDHSPTFG 1745
Query: 112 QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIV 166
+ L+ V + ++ ++ A+D DG ++ Y++ PS +
Sbjct: 1746 -----------NTHLSLEVPEGQDPQTLTTLRASDPDGGLNGQLQYRILGGDPSGAFALD 1794
Query: 167 PQTGELLLTGDPPSDDVE--YELTVEAHDLQSPSRYA 201
+GE T P +VE ++L +EA D P+ A
Sbjct: 1795 LTSGEFGTT-RPLDREVEPAFQLQIEARDGGQPALSA 1830
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y + G D H F L + +G L V +DRE+ A++ L + A+D
Sbjct: 1573 VSYRLAAGGDGH-FRL------------HATTGALSVVR-PLDREQRAEHVLTVVASDHG 1618
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIV 119
++ T + TV V+D ND +P F Q+ Y I+
Sbjct: 1619 SPPRSSTQLLTVSVVDVNDEAPAFPQQEYNVIL 1651
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGI-NKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +G++DRE + Y L + A D +A+ + V +LD ND++P F+Q Y +V +
Sbjct: 201 LVIAGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAVVSE 260
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDA 147
SL + F+S A A
Sbjct: 261 ---SLAPGSPVLQVFASDADAGANGA 283
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 76/176 (43%), Gaps = 27/176 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVK----GINKAETHVTVDVLDENDNSPVFS 111
ES+SG L V + +DRE Y+L + A G V V +L++ND+SP S
Sbjct: 1042 ESQSGWLWVRAA-LDRESQELYTLKVMAVSGSKAELGQQTGTATVRVVILNQNDHSPRLS 1100
Query: 112 QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAY---KLAVPSNLVVI 165
++ V + + +S+G V ATD D ++ Y +L+ S I
Sbjct: 1101 EEPTFLAVAE----------NQPPGTSVGRVFATDKDSGPNGRLTYSLQQLSEDSKAFRI 1150
Query: 166 VPQTGEL--LLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVW---LQFNSPVL 216
PQTGE+ L T D ++L V+ D SP R A V L NSP
Sbjct: 1151 HPQTGEVTTLQTLD-REQQSSFQLLVQVQDAGSPPRSATGTVHVAVLDLNDNSPTF 1205
>gi|148703183|gb|EDL35130.1| mCG142341 [Mus musculus]
Length = 2317
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
Query: 66 SGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYR 116
+G++DREEV+ YSL + ATD KG + T V V VLD NDN+PVF+Q +YR
Sbjct: 60 TGELDREEVSNYSLTVVATD-KGQPPLSSSTEVVVMVLDINDNNPVFAQAMYR 111
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 31/176 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I GN +F + N T EIR+ +DRE+++ Y L + +
Sbjct: 604 PNGQLDYEIVNGNQESSFTI-NHATGEIRSIRP------------LDREKISHYELTVKS 650
Query: 84 TDVKGINKAETHVTV--DVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
+D KG T V V +LDENDN+P FSQ ++ S NS + + ++
Sbjct: 651 SD-KGSPSQSTSVKVIISILDENDNAPRFSQIFSAYV------SENSPLGY-----TVTR 698
Query: 142 VSATDADGDKVA---YKLAVPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ +D D A Y + S I P TG+++++ +D + Y + V AHD
Sbjct: 699 VTTSDEDIGINAISRYSIVDTSLPFTINPNTGDIVISRPLNREDTDRYRIRVSAHD 754
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 35/177 (19%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+ Y+IT GN+ FA+ S +GV+ + +D E +++ + I+ATD
Sbjct: 1028 LISYNITSGNEEGIFAIN------------SSTGVVTLAKA-LDYEMSSKHEMTISATDG 1074
Query: 87 KGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + +TV V+D NDNSPVF + V + S + V H ++AT
Sbjct: 1075 GWVARTGYCSLTVSVIDVNDNSPVFVPDEFFPTVMENAPS-GTTVIH---------LNAT 1124
Query: 146 DADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE----YELTVEAHDL 194
DAD +AY + + S+L VI P G + G D E Y LTV+A ++
Sbjct: 1125 DADSGANAVIAYTVQSSDSDLFVIDPNMGVITTQG---FLDFETKQSYHLTVKAFNV 1178
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 76/172 (44%), Gaps = 34/172 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+ SG +DRE+ + SL + A + ++G + E V + VLD ND PVFS YR +
Sbjct: 1260 IYVSGLLDREKEERVSLKVLAKNFGNIRGADIDEVTVNITVLDAND-PPVFSLSTYRVQI 1318
Query: 120 GD---------LKSSLNSN-VSHWKKFSS-IGSVSATDADGDKVAYKLAVPSNLVVIVPQ 168
+ S+ +S+ + W +FS IGS + A I PQ
Sbjct: 1319 SEGVPIGTHVTFVSAFDSDSIPSWSRFSYFIGSGNENGA---------------FSINPQ 1363
Query: 169 TGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
TG++ +T + + Y LTV A D +PS V L+ N PVL
Sbjct: 1364 TGQITVTSGLDRESLPVYNLTVLAVDSGTPSATGSASLLVTLEDINDNGPVL 1415
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 72/164 (43%), Gaps = 21/164 (12%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE 93
QG N+ P T+ ST +GVL T+ +IDRE++A + L + D +
Sbjct: 1446 QGPFNYYLLSTGPATNYFSLST---AGVL-STTREIDREQIADFYLSVVTRDSGAPQMSS 1501
Query: 94 TH-VTVDVLDENDNSPVFSQKVYRFI--VGDLKSSLNSNVSHWKKFSSIGSVSATDADG- 149
T V + VLD+NDN P S+ V F+ G+L ++GSV D D
Sbjct: 1502 TGTVHITVLDQNDN-PSQSRTVEIFVNYYGNLFPG-----------GTLGSVKPQDPDVL 1549
Query: 150 DKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHD 193
D L + +P G L+ P S D ++LTV + D
Sbjct: 1550 DSFHCSLTSGVTSLFSIP-AGSCDLSSQPRSTDGTFDLTVVSSD 1592
Score = 37.4 bits (85), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 96/237 (40%), Gaps = 32/237 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+V S ++RE+ +Y + ++A D T VT+ V D NDN+P FS+ Y +L
Sbjct: 732 IVISRPLNREDTDRYRIRVSAHDSGW--TVSTDVTIFVTDINDNTPRFSRPSYYLDCPEL 789
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELL------ 173
L S V+ VSATD D +V Y + S I TGE+
Sbjct: 790 P-ELGSRVTQ---------VSATDPDEGSNGQVFYFIKSQSEYFRINATTGEIFNKQVLK 839
Query: 174 ---LTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSE 230
++G + + V A D +PS ++ + + V ++ Q + K
Sbjct: 840 YQNVSGFSNVNINRHSFIVTASDRGNPSLFSETTVTI-----NTVDSNDNPPQFLQNKYF 894
Query: 231 APHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
P + T+ ++ T D D + + + + KFK+ ++ WI++
Sbjct: 895 TPVTKNVKVGTKLIKVTAVDD---KDFGLNSEVEYFVSDGNHLGKFKLDNDTGWISI 948
>gi|301753499|ref|XP_002912636.1| PREDICTED: protocadherin gamma-B6-like [Ailuropoda melanoleuca]
Length = 905
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 80/160 (50%), Gaps = 24/160 (15%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQK 113
+ SK+ LVT G +DRE+ +Y++ ITATD K + T +T+ + D NDN+PVF Q
Sbjct: 396 SSSKNYYKLVTDGALDREQTPEYNVTITATDRGKSPLSSSTTITLHITDVNDNAPVFHQA 455
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL-------- 162
Y V + + +SI VSA+D D +V+Y + V S+L
Sbjct: 456 SYVVHVAE----------NNPPGASIAQVSASDPDLGPNGRVSYSI-VASDLEPRALASY 504
Query: 163 VVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYA 201
V + Q+G + + + +ELT++A D SP+ A
Sbjct: 505 VSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSA 544
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 69 IDREEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DREE + L++TA D + A T + + V D NDN PVFS+ YR V +
Sbjct: 200 LDREEQRSHRLILTALDGGDPPRSATTRIEIFVRDANDNFPVFSKDEYRVSVSE------ 253
Query: 128 SNVSHWKKFSSIGSVSATDAD 148
+ SS+ V+ATD D
Sbjct: 254 ----NLPPGSSVLQVTATDKD 270
>gi|410948469|ref|XP_003980961.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin beta-3 [Felis catus]
Length = 731
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 72/150 (48%), Gaps = 28/150 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+T+ +DRE ++Y++ IT TD+ K + ++TV V D NDN+P FSQ Y V +
Sbjct: 403 LLTNTPLDRETKSEYNITITVTDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H IGSVSATD D +V Y L P++ LV I G+
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGANAQVTYSLLPPADPQLPLASLVSINADNGQ 512
Query: 172 LLLTGDPPSDDVE----YELTVEAHDLQSP 197
L S D E +E V A D SP
Sbjct: 513 LFALR---SLDYEALRAFEFGVRAADRGSP 539
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 69/142 (48%), Gaps = 23/142 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINK---AETHVTVDVLDENDNSPVFSQKVYRFIV 119
LV +DREE ++ L +TA D ++ A+ H+ V LD NDN+P F+Q +Y +
Sbjct: 194 LVLDKSLDREEQPEFILTLTALDGGSPHRSGIAKIHILV--LDINDNAPEFTQTLYEVQI 251
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLV----VIVPQTGEL 172
+ S LNS V +VSATD D V+Y S + + P TG++
Sbjct: 252 LE-NSPLNSVVV---------TVSATDLDTGNFGTVSYAFFHASEEIRKTFQLNPITGDI 301
Query: 173 LLTGDPPSDDVE-YELTVEAHD 193
L +++ YEL +EA D
Sbjct: 302 QLVKYLNFEEMNTYELDIEAKD 323
>gi|363747331|ref|XP_003643984.1| PREDICTED: protocadherin beta-2-like [Gallus gallus]
Length = 811
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 15/102 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHV-TVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DREE AQ+ +V+TA D TH +VD+ D NDN+PVF+Q Y V +
Sbjct: 398 LVTVSTLDREERAQHMVVVTAADAGSPPLTSTHTFSVDISDVNDNAPVFNQTSYTMYVHE 457
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPS 160
+N +G+V ATDAD KV+Y + VP+
Sbjct: 458 ------NNAPALL----VGAVKATDADAGPNAKVSYSV-VPA 488
Score = 37.4 bits (85), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVY 115
V LV +DREE ++ + ATD ++ T + + V+D NDN+P+F+ +Y
Sbjct: 186 VQLVLQQPLDREEQSELDFTLVATDGGSPPRSGTTQIHIIVMDVNDNAPIFTHDIY 241
>gi|363738855|ref|XP_003642081.1| PREDICTED: protocadherin beta-4-like [Gallus gallus]
Length = 1044
Score = 53.9 bits (128), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/102 (38%), Positives = 54/102 (52%), Gaps = 15/102 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHV-TVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DREE AQ+ +V+TA D TH +VD+ D NDN+PVF+Q Y V +
Sbjct: 631 LVTVSTLDREERAQHMVVVTAADAGSPPLTSTHTFSVDISDVNDNAPVFNQTSYTMYVHE 690
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPS 160
+ +G+V ATDAD KV+Y + VP+
Sbjct: 691 NNAPA----------LLVGAVKATDADAGPNAKVSYSV-VPA 721
Score = 45.8 bits (107), Expect = 0.023, Method: Composition-based stats.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 25/151 (16%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQK 113
+E+ + LV +DREE + + ATD ++ T + + VLD NDN+PVF+QK
Sbjct: 413 SENGKFIELVLEKPLDREEQPELDFTLVATDGGSPPRSGTTQIHIVVLDANDNAPVFTQK 472
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVP----SNLVVI 165
VY + + + + S + V A DAD GD ++Y+ + +L I
Sbjct: 473 VY----------IGHVLENAPEGSVVLRVVANDADEGVNGD-ISYQFSQSVGHRHSLFTI 521
Query: 166 VPQTGELLLTGDPPSD---DVEYELTVEAHD 193
+TGE+ + P D + ++ELTV+A D
Sbjct: 522 NSKTGEIGIA--KPLDFETEKKHELTVQAID 550
>gi|402872817|ref|XP_003900296.1| PREDICTED: protocadherin beta-14 [Papio anubis]
Length = 798
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/178 (34%), Positives = 80/178 (44%), Gaps = 32/178 (17%)
Query: 32 ITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN- 90
I DN F LK PT K+ LV+ +DRE A+Y++ IT TD+
Sbjct: 382 ICSIEDNLPFFLK-PTF---------KNFFTLVSEKALDRESQAEYNITITVTDLGTPRL 431
Query: 91 KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD 150
K E ++TV V D NDN+P F++ Y V + NS H IGSVSATD D
Sbjct: 432 KTEYNITVLVSDVNDNAPTFTRTSYTLFVRE----NNSPALH------IGSVSATDRDSG 481
Query: 151 ---KVAYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSP 197
+V Y L P ++LV I G L + + E+E V A D SP
Sbjct: 482 TNAQVTYSLLPPQDPHLPLASLVSINTDNGHLFALRSLDYEALQEFEFRVGATDRGSP 539
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 17/119 (14%)
Query: 45 NPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDV 100
+P +H +I +S++ K LV +D E+ A+ L +TA D K+ T V + V
Sbjct: 173 SPNSHFYIKIPDSSDRKIYPELVLDRSLDYEQEAELRLTLTALDGGSPPKSGTTLVLIKV 232
Query: 101 LDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
LD NDN+P F Q +Y V + + + W I ++SA D D K++Y
Sbjct: 233 LDINDNAPEFPQSLYEVQVPE-----DRPIGSW-----IVTISAKDLDAGNYGKISYTF 281
>gi|338722643|ref|XP_003364582.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin-23-like [Equus
caballus]
Length = 2782
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 129/311 (41%), Gaps = 77/311 (24%)
Query: 12 GLPILVASSHKH---PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G I V S++ H H + Y I GN+ F L E K+GVL +
Sbjct: 2091 GSQITVVSANDHDVGSHAKIIYYIISGNEKGHFYL------------EEKTGVLYLIK-P 2137
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D EE +++L + A+D + + V V+VLD+ND++P F + SSLN
Sbjct: 2138 LDYEETIKFTLTVQASDEEKKQFSFAVVFVNVLDDNDHAPQF-----------MFSSLNC 2186
Query: 129 NV-SHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDV- 183
V + FS+I SV+A D D ++ Y + ++ +P + + L DP + D+
Sbjct: 2187 VVPENLPVFSTICSVNALDFDAGPYGELTYSVLSSCSVTHGMPHSHDRFLV-DPLTGDIY 2245
Query: 184 -----------EYELTVEAHDLQSPSRYAREPAQVWLQFNS-----PVLQDEQLLQMIDR 227
+Y T++A D VW+ P+ +Q +
Sbjct: 2246 AKQVLDYENDNKYCFTIQAKDKGD----LTASLMVWVDIEGIDEFEPIFTQDQYFFSLPE 2301
Query: 228 KSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
KS I R++ S+ D ++G I+++LE + P+ +V
Sbjct: 2302 KSNIRQLI------------GRVEASDADAGIDGVILYSLETPS-----------PFFSV 2338
Query: 288 DE-NGDVRVKK 297
++ NG++ + +
Sbjct: 2339 NKTNGNIYLTR 2349
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 22/181 (12%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH 95
N F+L + + + + +GV+++ +D EE +Y L+I +D+ ++ E
Sbjct: 1786 NPAFIFSLTKESNPGTKFAIDQTTGVVVLVK-TLDFEEATEYELLIQISDL--VHHTEGA 1842
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK-VAY 154
+ V VLD NDN PVFSQ Y+ + +L V + S+ +V+ATD +G++ ++Y
Sbjct: 1843 LIVRVLDVNDNPPVFSQDYYQVTIPELVP-----VGY-----SVLTVAATDLEGNENISY 1892
Query: 155 KLAVPSNLVVIVPQTGELL-----LTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL 209
++ S I P G + L D S + VEA D P AR ++ +
Sbjct: 1893 RILSSSREFSIDPMNGTIFTINPVLLLDKKS---TIQFLVEASDSGIPDLRARTLVEIEI 1949
Query: 210 Q 210
Q
Sbjct: 1950 Q 1950
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 22/131 (16%)
Query: 23 HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVIT 82
H + V YSI GN + F ++ TH + K LV +DRE +A + LVI
Sbjct: 1990 HENTYVEYSIISGNSQNNFHVETSFTH---SEYPYKQVGYLVLLHKLDREAIASHKLVIL 2046
Query: 83 ATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141
A+D + T V+++VLD NDN P F+ Y +H K+ + +GS
Sbjct: 2047 ASDHGCPPLSSTAIVSIEVLDVNDNPPKFNSLKYH--------------AHVKESTPLGS 2092
Query: 142 ----VSATDAD 148
VSA D D
Sbjct: 2093 QITVVSANDHD 2103
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 16/90 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
V YSI GN+N F L +S LL T+ +D E Q+ L + A D
Sbjct: 1064 VTYSILSGNENLAFMLD-------------ESSGLLTTTCPLDYEIKTQHVLTLLALDDG 1110
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVY 115
V ++ ++T +T+ VLD ND +PVF Q +Y
Sbjct: 1111 VPALSSSQT-LTITVLDVNDETPVFKQHLY 1139
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V+Y I GN + FA+ +SG L T +DRE+V ++LVI +D+
Sbjct: 1273 VKYHIIDGNTDEYFAVNE------------RSGELSTTRA-LDREQVNNFTLVILCSDLG 1319
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYR 116
++ + V VLD+ND+SP F Y+
Sbjct: 1320 DPPRSSIMQLQVRVLDDNDHSPSFPMLHYQ 1349
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 61/147 (41%), Gaps = 26/147 (17%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN +GT + + S ++ ++YSI GN++ F+L S SG
Sbjct: 1560 ENCDAGTSIVTVKAFAPDSIRNS---IKYSIFSGNEDGVFSLC------------SNSGE 1604
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L V EV +I + +G ++A + V V + D NDN P F Q VY+ V +
Sbjct: 1605 LTVKEPKFLDFEVRNEVQLIVLAESRG-HRAYSKVAVAIQDVNDNLPRFEQSVYQVSVSE 1663
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
W + I V ATD D
Sbjct: 1664 ----------GWFYSARIVQVFATDLD 1680
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 59/131 (45%), Gaps = 29/131 (22%)
Query: 63 LVTSGDIDRE-EVAQYSLVITATD-----------VKGINKAETHVTVDVLDENDNSPVF 110
+ S DIDRE + A Y L++ A D VKG A+ V V++ D NDN PVF
Sbjct: 78 ICVSQDIDRERDPATYDLLVKAKDGDEQRTTHSTLVKGGLSAQAFVRVELEDVNDNEPVF 137
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP---SNLVV 164
+ Y + S + + I +V ATD D VAY+L +P S L
Sbjct: 138 NPSTY----------VTSISGQTQPGTEIINVLATDRDSGIYGTVAYEL-IPGDLSPLFT 186
Query: 165 IVPQTGELLLT 175
I TG + LT
Sbjct: 187 IDSTTGIIYLT 197
>gi|269995991|ref|NP_001013427.2| protocadherin beta-2 precursor [Pan troglodytes]
Length = 798
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 54/104 (51%), Gaps = 14/104 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV S +DRE ++Y++ IT TD K E ++TV V D NDN+P F+Q Y V +
Sbjct: 405 LVISTALDRETRSEYNITITVTDFGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLFVRE 464
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNL 162
NS H IGSVSATD D +V Y L P +L
Sbjct: 465 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDL 498
>gi|440902401|gb|ELR53198.1| Protocadherin alpha-C1, partial [Bos grunniens mutus]
Length = 1024
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 81/153 (52%), Gaps = 14/153 (9%)
Query: 48 THEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDN 106
T + +NS E S + LV +DREE+ ++SL++TA+D T + + +LD NDN
Sbjct: 167 TLDTQNSREQMSSLSLVLRKSLDREEIQEHSLLLTASDGGKPELTSTVQLLITILDVNDN 226
Query: 107 SPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIV 166
+P F Q +Y+ + L++SLN ++ K ++ T+AD + Y P + ++
Sbjct: 227 APEFDQLIYKVRI--LENSLNGSL--VIKLNATDPDDGTNAD---ITYSFRRPVSPAILY 279
Query: 167 -----PQTGELLLTGDPPSDDVE-YELTVEAHD 193
P +GE+ G ++ + YE++VEA D
Sbjct: 280 AFYINPDSGEIRTKGKLDFEENKLYEISVEAID 312
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYR 116
LV +DRE+ A + LV+TA D G+ E VT+ V+D NDN+PVF + VYR
Sbjct: 509 LVLEKALDREQRATHRLVLTARD-GGLPARSGEVQVTIVVVDANDNAPVFERSVYR 563
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 49/99 (49%), Gaps = 16/99 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIVG 120
LVT G +DRE+V +Y ++ITA+D G T +TV V D NDN+P F + V
Sbjct: 721 LVTDGPLDREQVGEYQVLITASD-GGSPPLSTRRTLTVSVADVNDNTPSFPKSKQELFVA 779
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKL 156
+ + +S+G V A D D K V Y+L
Sbjct: 780 E----------NNAPGASLGHVFAQDPDLGKNGLVFYEL 808
>gi|62510890|sp|Q5DRD8.1|PCDBB_PANTR RecName: Full=Protocadherin beta-11; Short=PCDH-beta-11; Flags:
Precursor
Length = 797
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 69/143 (48%), Gaps = 24/143 (16%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+DRE A+Y++ IT TD+ GI K E + TV V D NDN+P F+Q Y V S
Sbjct: 409 LDRESTAEYNITITVTDL-GIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFV----SEN 463
Query: 127 NSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGELLLTG 176
NS H IGSVSATD D +V Y L P ++LV I G L
Sbjct: 464 NSPALH------IGSVSATDRDSGTNAQVNYSLLPPQDPHLPLASLVSINADNGHLFALR 517
Query: 177 DPPSDDVE-YELTVEAHDLQSPS 198
+ ++ +E V A D SP+
Sbjct: 518 SLDYEALQAFEFRVGATDRGSPA 540
>gi|344265062|ref|XP_003404606.1| PREDICTED: protocadherin beta-16-like [Loxodonta africana]
Length = 797
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 72/152 (47%), Gaps = 30/152 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVG 120
LVT G +DRE A+Y++ IT TD+ G + +T + VL D NDN+P F+Q Y +
Sbjct: 403 LVTKGALDREAKAEYNITITFTDL-GTPRLKTKCNIMVLVSDVNDNAPTFTQTSYTLFIR 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H +GSVSATD D +V Y L P ++LV I G
Sbjct: 462 E----NNSPALH------MGSVSATDRDSGSNAQVTYSLLPPQDPHLPLASLVSINADNG 511
Query: 171 ELLLTGDPPSDDVE----YELTVEAHDLQSPS 198
L S D E +E V A D SP+
Sbjct: 512 HLFALR---SLDYEALRAFEFRVGAIDAGSPA 540
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV ++DREE ++ L +TA D ++ T V V+V+D NDN+P F Q +Y+ + +
Sbjct: 194 LVLDKELDREEGPEFRLTLTALDGGSPPRSGTTQVRVEVVDINDNAPEFEQALYKVQIPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP----SNLVVIVPQTGELLL 174
S + +VSA D D KV+Y L P S ++ + P TGE+ L
Sbjct: 254 ----------DSPTGSLVVTVSARDLDSGVNGKVSYTLFQPSEDTSKILEVNPTTGEIQL 303
Query: 175 TGDPPSDDV-EYELTVEAHD 193
T + YE+ +EA D
Sbjct: 304 TTQVDYETTRSYEVDIEATD 323
>gi|410948467|ref|XP_003980960.1| PREDICTED: protocadherin beta-2 [Felis catus]
Length = 784
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 72/150 (48%), Gaps = 28/150 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+T+ +DRE ++Y++ IT TD+ K + ++TV V D NDN+P FSQ Y V +
Sbjct: 404 LLTNTPLDRETKSEYNITITVTDLGTPRLKTQHNITVTVSDVNDNAPAFSQTTYTLRVRE 463
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSN-------LVVIVPQTGE 171
NS H IGSVSATD D +V Y L P++ LV I G+
Sbjct: 464 ----NNSPALH------IGSVSATDRDSGANAQVTYSLLPPADPQLPLASLVSINADNGQ 513
Query: 172 LLLTGDPPSDDVE----YELTVEAHDLQSP 197
L S D E +E V A D SP
Sbjct: 514 LFALR---SLDYEALRAFEFGVRAADRGSP 540
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 21/160 (13%)
Query: 45 NPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVL 101
+P +H +S G+L LV +DREE A+ L +TA D ++ T V ++VL
Sbjct: 175 SPNSHFHLKLQDSSDGILPQLVLDKALDREEQAEIRLTLTALDGGTPPRSGTALVRIEVL 234
Query: 102 DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV 158
D NDN+P F++ +Y V + NS + + VSA D D +++Y +
Sbjct: 235 DINDNAPEFAKLLYEVQVLE-----NSPIGF-----QVAVVSARDLDIGTYGEISYVFSQ 284
Query: 159 PS----NLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
S I ++GEL+LT + ++ Y L ++A D
Sbjct: 285 ASEDIRKTFQINAKSGELILTQRLDFESIQSYTLNIQATD 324
>gi|397518034|ref|XP_003829203.1| PREDICTED: protocadherin alpha-13 [Pan paniscus]
Length = 807
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 22/157 (14%)
Query: 48 THEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDN 106
T + +NS E S + LV +DREE+ ++SL++TA+D K + + +LD NDN
Sbjct: 179 TLDAQNSLEQMSSLSLVLRKTLDREEIQEHSLLLTASDGGKPELTGTVQLLITILDVNDN 238
Query: 107 SPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVPSNL 162
+P F Q VY+ V L+++ N + + ++ATD D GD + Y P +
Sbjct: 239 APEFYQSVYKVTV--LENAFNGTL--------VIKLNATDPDDGTNGD-IVYSFRRPVSP 287
Query: 163 VVIV-----PQTGELLLTGDPPSDDVE-YELTVEAHD 193
V+ P GE+ G ++ + YE++VEA D
Sbjct: 288 AVVYAFTINPNNGEIRTKGKLDFEEKKLYEISVEAVD 324
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE V+ Y LV+TA D + A V+V V D NDN+P F+Q Y V +
Sbjct: 407 LVLDSALDRESVSAYELVVTARDGGSPSLWATASVSVGVADVNDNAPAFAQPEYTVFVKE 466
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKL 156
N H I +VSA DAD + V+Y L
Sbjct: 467 ----NNPPGCH------IFTVSAQDADAQENALVSYSL 494
>gi|395736266|ref|XP_003776723.1| PREDICTED: protocadherin beta-2 [Pongo abelii]
Length = 798
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV S +DRE ++Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 405 LVISTALDRETRSEYNITITVTDLGTPRLKIENNITVLVSDVNDNAPFFTQTSYTLFVRE 464
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 465 ----NNSPALH------IGSVSATDRDSGTNAQVTYLLLPPQDPHLPLASLVSINADNGH 514
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 515 LFALQSLDYEALQAFEFRVGASDRGSPA 542
>gi|334311403|ref|XP_003339609.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 2-like [Monodelphis
domestica]
Length = 4351
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 94/205 (45%), Gaps = 25/205 (12%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G P+L+ S+ V Y + +GN + F++ S SG L+ T ++D
Sbjct: 1671 GSPLLLVSALSTSE--VTYEMREGNKDGVFSIN------------SYSG-LISTQKNLDH 1715
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E+V+ Y L + +++ G A+ V V ++DENDN+PVF + VG + + +
Sbjct: 1716 EKVSSYQLKVRGSNMAGA-FADVMVLVYIIDENDNAPVFINSSF---VGQISEAAPIHSM 1771
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EY 185
++ V ATDAD D + Y++ L I P G L + + + +
Sbjct: 1772 ILGEYHHPLVVRATDADTDANALLVYEILEREALKFFKIDPSMGTLTTVMEMDYEHIPSF 1831
Query: 186 ELTVEAHDLQSPSRYAREPAQVWLQ 210
++ HD SP +A +PA+V +
Sbjct: 1832 SFSIHVHDQGSPILFASKPARVTIH 1856
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 82/186 (44%), Gaps = 33/186 (17%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTF-----ALKNPTTHEIRNST 55
ENS T V+ L + P +VRY I G+ F + N IR
Sbjct: 42 FENSAPKTYVESLGKM-GVYLAEPQLVVRYRIISGDLAGVFKTEEYVVGNFCFLRIR--- 97
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
+KSG + ++RE Y+LVI AT+ +A THV + +LD+ND P+FS Y
Sbjct: 98 -TKSG----NTAILNREVRDSYTLVIQATEQTLGYEASTHVLIHILDQNDLKPLFSPPSY 152
Query: 116 RFIVGD---LKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLAVPSNLVVIVPQT 169
+ + + LK S+I VSATDAD + A Y S L + P +
Sbjct: 153 KVAITEDTPLK-------------SAICMVSATDADLGQNADFYYAFNARSELFTVHPTS 199
Query: 170 GELLLT 175
G + +T
Sbjct: 200 GVVTVT 205
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 76/149 (51%), Gaps = 16/149 (10%)
Query: 50 EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSP 108
E R + E ++G+L V + +D E + Y L +T D+ K+ H+ V+V DENDN+P
Sbjct: 756 ESRFNVELETGLLKV-AAPLDHETTSFYILNVTVYDLGTPQKSTWKHLAVNVGDENDNTP 814
Query: 109 VFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVI 165
RF G + + ++ + ++I + A DAD D +V Y L P++ +
Sbjct: 815 -------RFPPGGYQVEIREDI---EVGTTIAQMKAEDADSDDNGRVCYTLLSPTDKFSV 864
Query: 166 VPQTGELLLTGDPPSDD-VEYELTVEAHD 193
TGE+++TG + +Y L VEA D
Sbjct: 865 HALTGEVVVTGSLDRESQPQYVLKVEARD 893
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 16/95 (16%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
+ + K+GVL VT G +D E ++ + ATD + +E V V V D NDN PVFSQ
Sbjct: 2212 TADFKTGVLTVT-GPLDYESQTKHIFTVRATDTALGSFSEATVEVQVEDINDNPPVFSQL 2270
Query: 114 VY---------------RFIVGDLKSSLNSNVSHW 133
VY + + D S N +VS+W
Sbjct: 2271 VYSALVSEGLPPQTPVIQLLASDQDSGRNKDVSYW 2305
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 92/201 (45%), Gaps = 35/201 (17%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+EN + G V L L A + Q+ Y IT+G+ F + + E K
Sbjct: 2912 IENGEPGEHVATLRTLDADISEQNRQVTCY-ITEGDPLGQFGIS-------QTGDEWK-- 2961
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+ T +DRE +A+Y L +TA+D G +A T V V VLD NDNSP ++ +Y
Sbjct: 2962 --ITTKKTLDREHIAKYLLKVTASD--GKFQASTPVEVFVLDINDNSPQCTKILY----- 3012
Query: 121 DLKSSLNSNV--SHWKKFSSIGSVSATDAD---GDKVAYKLAVP-SNLVVIVPQTGEL-- 172
S + +V H+ I V+ATD D V Y L P ++ + P TGEL
Sbjct: 3013 --SSKVPEDVLPGHF-----ILQVTATDLDTGVNALVTYSLHGPGADEFKLDPYTGELTT 3065
Query: 173 LLTGDPPSDDVEYELTVEAHD 193
L+ D DV Y L +A D
Sbjct: 3066 LMLLDREEKDV-YYLVAKATD 3085
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 58/117 (49%), Gaps = 18/117 (15%)
Query: 46 PTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDEND 105
PT+ S++G L+ T+ +D + A+Y L I T + +A T V +D++D N+
Sbjct: 398 PTSESSGFKINSRTG-LITTTRLMDFHDRARYQLHIGTT----LGQASTTVVIDIIDCNN 452
Query: 106 NSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVP 159
++PVFSQ Y G +L +SI +V+ATD D + V Y + P
Sbjct: 453 HAPVFSQSSYH---GTFDENLPPG-------TSILTVTATDQDHGENGFVTYSITSP 499
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 51/123 (41%), Gaps = 31/123 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-V 86
+ + IT GN+ F + + T LL T+ +DRE A++ L + D
Sbjct: 1168 LTFHITSGNNLGFFVINSLTG-------------LLSTARQLDRENKAEHILEVAVQDNG 1214
Query: 87 KGINKAETHVTVDVLDENDNSPVFSQK-----------------VYRFIVGDLKSSLNSN 129
K ++ + V V VLD NDNSP FS K VYR + D N
Sbjct: 1215 KPSLQSTSRVVVRVLDVNDNSPTFSHKRFKIRLPERQDSSVPRPVYRLVASDRDEGPNGK 1274
Query: 130 VSH 132
VS+
Sbjct: 1275 VSY 1277
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 113/276 (40%), Gaps = 48/276 (17%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
+++Y + G D TF++ T ++ T +DRE Y L + A D
Sbjct: 1062 VIQYFLRDGTDLDTFSIDRDTG-------------MIQTMMPLDREFSPHYWLTVLAVDQ 1108
Query: 87 KGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+ + T V ++V+D NDN P S+ VY V + + +N +S+ + A
Sbjct: 1109 GSVPLSSVTEVYIEVMDTNDNPPQMSRPVYYPSVKE-DAPMN---------TSVLQLDAW 1158
Query: 146 DAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHDLQSPSR 199
D D K+ + + +NL V + LL+ D E+ L V D PS
Sbjct: 1159 DPDPVSQGKLTFHITSGNNLGFFVINSLTGLLSTARQLDRENKAEHILEVAVQDNGKPS- 1217
Query: 200 YAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPH-----RIEKRRVTRAVRPTKRIDFSE 254
LQ S V+ ++L + D H R+ +R+ + RP R+ S+
Sbjct: 1218 ---------LQSTSRVVV--RVLDVNDNSPTFSHKRFKIRLPERQDSSVPRPVYRLVASD 1266
Query: 255 TDGEMEGRIVFALEKETEREKFKIRDENPWITVDEN 290
D G++ +++E+ E E F I E ++ N
Sbjct: 1267 RDEGPNGKVSYSIEENYE-EAFTIDAETGLVSASVN 1301
>gi|395817798|ref|XP_003804089.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin gamma-A8 [Otolemur
garnettii]
Length = 935
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 61/124 (49%), Gaps = 14/124 (11%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE 93
Q + NH F+L T + S E LV +DREE A + LV+TA+D ++
Sbjct: 266 QLSPNHHFSLDVQTGDDGTLSPE------LVLESALDREEEAAHHLVLTASDGGDPRRSS 319
Query: 94 T-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKV 152
T + V VLD NDN+PVF+Q +YR V + NV + ++ + + KV
Sbjct: 320 TVRIQVTVLDTNDNAPVFAQPIYRVKVLE-------NVPPGTQLLTVAASDPDEGANGKV 372
Query: 153 AYKL 156
AYK
Sbjct: 373 AYKF 376
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVY 115
LVT +DRE+V+ Y++ + A+D+ ETH+ + V D NDN P F Y
Sbjct: 499 LVTWKYLDREKVSIYNITVMASDLGTPPLSTETHIALQVADINDNPPTFPHASY 552
>gi|390459325|ref|XP_003732275.1| PREDICTED: protocadherin beta-7-like [Callithrix jacchus]
Length = 795
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 106/256 (41%), Gaps = 51/256 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTEKPLDRERNTDYNITITVTDLGTPRLKTEYNITVLVSDVNDNAPAFTQSSYTLFVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDSGTNAQVIYSLLPPQDTHLPLASLVSINADNGH 512
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSPV----LQDEQLL- 222
L + ++ +E V A D SP+ + +V + NSP LQ+ L
Sbjct: 513 LFALRSLDYEALQAFEFRVGATDRGSPALSSEALVRVLVLDANDNSPFVLYPLQNGSALC 572
Query: 223 -QMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDE 281
+++ R +E + + K + D + F L K TE F +
Sbjct: 573 TELVPRAAEPGYLVTKMVAV------------DGDSGQNAWLSFQLLKATEPGLFGV--- 617
Query: 282 NPWITVDENGDVRVKK 297
W NG+VR +
Sbjct: 618 --WA---HNGEVRTAR 628
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGD 121
LV + ++DRE++ + SL +TA D ++ T V + V+D NDN+P F Q Y+
Sbjct: 194 LVLNQELDREDIPELSLALTALDGGSPPRSGTALVRITVVDINDNAPEFVQSFYK----- 248
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVV----IVPQTGELLL 174
+++ NS V S + SVSA D D ++AY + ++ + P +G L L
Sbjct: 249 VQAPENSPVG-----SMVVSVSARDLDTGSNGEIAYAFFYATERILKTFQLNPTSGNLYL 303
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+ ++ Y LT++A D
Sbjct: 304 KAQLDYEAIQTYTLTIQAKD 323
>gi|341899126|gb|EGT55061.1| hypothetical protein CAEBREN_00867 [Caenorhabditis brenneri]
Length = 2727
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 73/158 (46%), Gaps = 17/158 (10%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+D E V +++L + TD G + T++T+ V D NDN+P FS+ Y V +
Sbjct: 1939 LDHEAVKEHTLKLKVTD--GHFETFTNLTIFVSDINDNAPKFSKDFYMTYVSPMT----- 1991
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYEL 187
+ +SATDAD K+ Y L+ S++ I + G L + PPS + Y L
Sbjct: 1992 ----YSPGLPFAKISATDADSQKITYSLSPDSSSIFKISSEDGSLSMRMLPPSGE-RYLL 2046
Query: 188 TVEAHDLQSPSRYAREPAQV----WLQFNSPVLQDEQL 221
TV A D PS P V L PV + ++L
Sbjct: 2047 TVTATDNGIPSLSTSVPVSVVIGEALPTEKPVFERQEL 2084
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 78/161 (48%), Gaps = 20/161 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
L +G IDRE+ A Y + + K + V +LDENDNSPVF+ ++ +L
Sbjct: 2129 LFVAGPIDREQKAAYEFTVEIDNEMMSQKVSSKCHVSILDENDNSPVFTSSMFYV---NL 2185
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPSNLVVIVPQT--GELLLT-- 175
K S+ +H + +IG + A D+D D +V+Y++ ++L ++ T G + L
Sbjct: 2186 KDSM----THGQ---TIGQILARDSDQDENGRVSYRILSGNDLNIVTLNTDSGAIQLNEW 2238
Query: 176 GDPPSDDV---EYELTVEAHDLQSPSRYAREPAQVWLQFNS 213
D D +++ VEA D P R QV L+ +S
Sbjct: 2239 NDAQLDRFPSGTWQILVEARDHGHPYRSTIGKVQVSLKMSS 2279
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 24/155 (15%)
Query: 29 RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV-K 87
++ I QGN N+ F L T+ ++ ++ LV +G +DRE +Y L+I A D K
Sbjct: 153 KFVILQGNVNNVFKL---TSRKVNEQLQAD----LVVNGQLDREFRDKYELLIEAEDGGK 205
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ ++++D NDN+PVFS+ Y +S+++N+S S I +V ATD
Sbjct: 206 PAKTGQLRCFIEIIDANDNAPVFSRSRY-------TASVSANISIG---SHIITVQATDG 255
Query: 148 D---GDKVAY---KLAVPSNLVVIVPQTGELLLTG 176
D +++Y K + PSN + +G + T
Sbjct: 256 DIGENSRISYEIKKTSSPSNSNFAISPSGVITTTA 290
>gi|326673383|ref|XP_002664329.2| PREDICTED: protocadherin gamma-A11-like [Danio rerio]
Length = 820
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G++DRE +++Y++ ITATD + T ++ + V D NDN PVF Q+ YR V +
Sbjct: 416 LVTTGELDRELLSEYNITITATDEGSPPLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 475
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ K SSI SVSATD D
Sbjct: 476 ----------NNKAGSSICSVSATDPD 492
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 85/177 (48%), Gaps = 38/177 (21%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET---HVTVDVLDENDNSPVFSQKVYRFIV 119
LV + ++DRE+ + +L++TA D ++ T HVTV LD NDN+PVFSQ VY+ +
Sbjct: 206 LVLNKELDREQQKEVTLILTAVDGGTPPRSGTVAIHVTV--LDANDNAPVFSQAVYKVSL 263
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPS----NLVVIVPQTGEL 172
+ NS V + + +VSATDAD +V Y S L VI +G +
Sbjct: 264 PE-----NSPVD-----TVVVTVSATDADEGQNGEVTYAFGHLSQKVIQLFVIDSVSGVI 313
Query: 173 LLTGDPPSD---DVEYELTVEAHDLQSPSRYA-----------REPAQVWLQFNSPV 215
LTG P D + EL ++A D Q S Y+ P + NSPV
Sbjct: 314 KLTG--PVDYEKEKTIELPIQAKDGQGLSSYSTVLIDIVDINDNAPIVILKSLNSPV 368
>gi|149068442|gb|EDM17994.1| dachsous 1 (Drosophila) (predicted) [Rattus norvegicus]
Length = 3278
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVL--LVTSGDIDREEVAQYSLVIT 82
H V YSI GN F L+ P E+ + L LV +D E + QY+L +T
Sbjct: 2495 HATVDYSIISGNRGRVFQLE-PRLAEVGDGVGPGPQALGCLVLLEPLDFESLTQYNLTVT 2553
Query: 83 ATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
A D + + VTV VLD NDN PVF++ YR V
Sbjct: 2554 AADRGQPPRSSAVPVTVTVLDVNDNPPVFTRASYRVTV 2591
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 66 SGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSS 125
+G +D E+ Y L + A D G ++ ++TV V D NDN P+FSQ +Y+ ++
Sbjct: 2314 TGPLDFEQCDHYHLQLLAHD--GPHEGHANLTVLVEDVNDNVPIFSQSLYQVMM------ 2365
Query: 126 LNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLLTGDPPSDD 182
+ H S+I SVSATD D ++Y LA P+ + G L T +
Sbjct: 2366 ----LEHTPPGSAILSVSATDRDSGANGHISYHLASPAEGFSVDTNNGTLFTTVGAMALG 2421
Query: 183 VE----YELTVEAHDLQSPSRYAREPAQVWLQ 210
E ++ +EA D +P R A+ V L+
Sbjct: 2422 HEGPGVVDVVLEARDHGAPGRSAQATVHVQLK 2453
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 93/235 (39%), Gaps = 29/235 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHV--TVDVLDENDNSPVFSQKVYRFIVG 120
L T+ +DRE A Y+ +TA D T V TV V D ND++P F R +
Sbjct: 1891 LSTATALDREHCASYAFSVTAVDGAAAGPLSTTVPITVTVRDVNDHAPAFPTSPLRLRLP 1950
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA-VPSNLVVIVPQTGELLLTG 176
SLN K ++ ++ A D D + Y+LA P + TGE+ +
Sbjct: 1951 RPGPSLN------KPTLALATLRAEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVAR 2004
Query: 177 DP----PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
P P D V L + A DL P+R A V +Q + E+ + +EA
Sbjct: 2005 SPAALGPRDRV---LFIVATDLGRPARSATGVVIVGIQG-----EPERGPRFPRANNEAV 2056
Query: 233 HRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITV 287
R T + P + G G I +++ ER F I+ ITV
Sbjct: 2057 LRENAPPGTPVISPK-----AVHSGGSNGPITYSILSGNERGIFSIQPSTGTITV 2106
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 84/207 (40%), Gaps = 26/207 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN GT V + P+ + YS+ Q +++ +P T E+
Sbjct: 1097 ENQPPGTSVGR--VFATDKDSGPNGRLTYSLQQLSEDSKAFRIHPQTGEV---------- 1144
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
T +DRE+ + + L++ D ++ T V V VLD NDNSP F Q G
Sbjct: 1145 --TTLQTLDREQQSSFQLLVQVQDAGSPPRSATGTVHVAVLDLNDNSPTFLQ-ASGAAGG 1201
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKL-AVPSNLVVIVPQTGEL-----LL 174
L + V +++ + + + + Y L S L + P TGEL L+
Sbjct: 1202 GLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGSGSELFSLHPHTGELHTAASLI 1261
Query: 175 TGDPPSDDVEYELTVEAHDLQSPSRYA 201
+ P Y LT+ AHD SP R A
Sbjct: 1262 RAERP----HYVLTLSAHDQGSPPRSA 1284
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 13/87 (14%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
PH LV ++++ G+ F L + SG L + +D E AQ+ LV+ A
Sbjct: 2613 PHGLVHFTLSSGDPLGLFEL------------DENSGALRLAH-PLDCETQAQHQLVVQA 2659
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVF 110
D G + A VTV+V D ND+ P F
Sbjct: 2660 ADPAGTHFALVPVTVEVQDVNDHGPAF 2686
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KA 92
+G + H FAL ST+ L+ + +DREE Y+L +TATD +A
Sbjct: 387 EGGEGH-FAL----------STQDSVIYLVCVARRLDREERDVYNLRVTATDSGSPPLRA 435
Query: 93 ETHVTVDVLDENDNSPVFSQKVYR 116
E + V D NDN+P F +++YR
Sbjct: 436 EAAFVLHVTDVNDNAPAFDRQLYR 459
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 75/157 (47%), Gaps = 23/157 (14%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFS 111
S + SGVL T +DREE + +L + A D +G+ TH+TV V DEND+SP F
Sbjct: 1675 SLDPNSGVL-TTLRALDREEQEEINLTVYARD-RGLPPLLTHITVRVTVEDENDHSPTFG 1732
Query: 112 QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIV 166
+ L+ V + ++ ++ A+D DG ++ Y++ PS +
Sbjct: 1733 -----------NTHLSLEVPEGQDPQTLTTLRASDPDGGLNGQLQYRILGGDPSGAFALD 1781
Query: 167 PQTGELLLTGDPPSDDVE--YELTVEAHDLQSPSRYA 201
+GE T P +VE ++L +EA D P+ A
Sbjct: 1782 LTSGEFGTT-RPLDREVEPAFQLQIEARDGGQPALSA 1817
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y + G D H F L + +G L V +DRE+ A++ L + A+D
Sbjct: 1560 VSYRLAAGGDGH-FRL------------HATTGALSVVR-PLDREQRAEHVLTVVASDHG 1605
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIV 119
++ T + TV V+D ND +P F Q+ Y I+
Sbjct: 1606 SPPRSSTQLLTVSVVDVNDEAPAFPQQEYNVIL 1638
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGI-NKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +G++DRE + Y L + A D +A+ + V +LD ND++P F+Q Y +V +
Sbjct: 188 LVIAGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLLDINDHAPAFNQSRYHAVVSE 247
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDA 147
SL + F+S A A
Sbjct: 248 ---SLAPGSPVLQVFASDADAGANGA 270
Score = 37.4 bits (85), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 76/176 (43%), Gaps = 27/176 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVK----GINKAETHVTVDVLDENDNSPVFS 111
ES+SG L V + +DRE Y+L + A G V V +L++ND+SP S
Sbjct: 1029 ESQSGWLWVRAA-LDRESQELYTLKVMAVSGSKAELGQQTGTATVRVVILNQNDHSPRLS 1087
Query: 112 QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAY---KLAVPSNLVVI 165
++ V + + +S+G V ATD D ++ Y +L+ S I
Sbjct: 1088 EEPTFLAVAE----------NQPPGTSVGRVFATDKDSGPNGRLTYSLQQLSEDSKAFRI 1137
Query: 166 VPQTGEL--LLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVW---LQFNSPVL 216
PQTGE+ L T D ++L V+ D SP R A V L NSP
Sbjct: 1138 HPQTGEVTTLQTLD-REQQSSFQLLVQVQDAGSPPRSATGTVHVAVLDLNDNSPTF 1192
>gi|354500163|ref|XP_003512171.1| PREDICTED: protocadherin beta-18-like [Cricetulus griseus]
Length = 793
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 21/119 (17%)
Query: 37 DNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH- 95
DN F LK PT K+ LVT +DRE A+Y++ IT TD+ H
Sbjct: 386 DNLPFLLK-PTF---------KNFYTLVTESSLDRESRAEYNITITVTDLGTPRLTTQHT 435
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAY 154
+TV V D NDN+P F+Q Y V + NS H IG++SATD+D A+
Sbjct: 436 ITVQVSDVNDNAPAFTQTSYTLFVQE----NNSPALH------IGTISATDSDSGSNAH 484
>gi|327273774|ref|XP_003221655.1| PREDICTED: LOW QUALITY PROTEIN: protocadherin Fat 1-like [Anolis
carolinensis]
Length = 4585
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 118/287 (41%), Gaps = 44/287 (15%)
Query: 23 HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVIT 82
H V Y I GN F + NP SGV+ + +D E ++ YSL I
Sbjct: 1693 HSQSSVVYEIKDGNTGDVFTI-NP-----------NSGVI-TSQKTLDFETLSFYSLTIQ 1739
Query: 83 ATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
T++ G A T + V + D+NDN+P F Q Y G + S ++N +
Sbjct: 1740 GTNMAG-QSANTTLLVHLQDKNDNAPTFMQTEY---TGHISESASANSVVLTDRHVPLVI 1795
Query: 143 SATDADGDK---VAYKLAVPS--NLVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQ 195
ATDAD D + Y++ PS I TG + +++ D + + +V+ D+
Sbjct: 1796 RATDADKDSNALLVYQIVEPSVHKYFTIDSSTGAIRTVMSLDYEERNT-FRFSVQVSDMG 1854
Query: 196 SPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKR------ 249
+P +A A V +++ID P + + PT +
Sbjct: 1855 TPRLFAEYAANV-------------TIRVIDINDCPPVFSKDLYEATVLVPTYKGVKVVM 1901
Query: 250 IDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
++ ++ D E R+++++ + EKF I + ITV +R +
Sbjct: 1902 VNATDADSETFSRLMYSITEGNIGEKFSIDSKTGQITVQNTTQLRSR 1948
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 108/247 (43%), Gaps = 49/247 (19%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G++ L + AS + + YSI GN++ F++ +SK+G + + G
Sbjct: 3245 GIEILQVYAASRDIEANAEITYSIISGNEHGKFSI------------DSKTGAIFIIGG- 3291
Query: 69 IDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+D E +Y L + ATD + ++ V ++V D NDN+PVFSQ Y ++ + +
Sbjct: 3292 LDYESSPEYYLTVEATDGGTPSLSDVVTVNINVTDINDNTPVFSQDTYTAVISE-----D 3346
Query: 128 SNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSDD 182
+ V S+ +V A D+DG + Y + N I P GE+ + +
Sbjct: 3347 AEVEQ-----SVVTVMAADSDGPLNSHIRYSIIDGNQENQFTIDPTLGEVKVAKLLDREK 3401
Query: 183 VE-YELTVEAHD-------------------LQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
+ Y LTV+A D +P +++ + +Q N PV + Q L
Sbjct: 3402 ISGYTLTVQASDNGNPPGINTTTVNIDVSDVNDNPPVFSKGNYSIIIQENKPVGFNIQQL 3461
Query: 223 QMIDRKS 229
++ D+ S
Sbjct: 3462 EVTDKDS 3468
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 58/118 (49%), Gaps = 17/118 (14%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
MENS V + A S + + Y IT GN F++ NP K+G
Sbjct: 1150 MENSPKDVSVIQIEAFDADSTANDK--LTYKITSGNPQGFFSM-NP-----------KTG 1195
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVYR 116
++ TS +DRE+ +++ L +T TD GI T V V +LDENDN P F QK Y+
Sbjct: 1196 LITTTSRKLDREQQSEHILEVTVTD-NGIPPKSTLARVIVKILDENDNRPQFLQKFYQ 1252
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 53/111 (47%), Gaps = 13/111 (11%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
++RE Y L + A + +A T + V VLD ND P+FS Y V + N+
Sbjct: 109 LNREVKDHYVLTVKAIEKNTNAEARTKIRVQVLDTNDLRPLFSPTSYSVSVPE-----NT 163
Query: 129 NVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTG 176
+ +SI VSATDAD + Y +++ I P +G ++LTG
Sbjct: 164 AIR-----TSIARVSATDADIGTNGEFYYSFKERTDMFAIHPTSGVIVLTG 209
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 15/111 (13%)
Query: 45 NPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLD 102
N +HE + +S +G++L+ S +D E+ Q++L++ A D G+ ++ VTV + D
Sbjct: 2327 NSNSHEYFH-IDSSTGIILI-SRSLDYEQSRQHTLLVRAID-SGMPPLSSDVVVTVGITD 2383
Query: 103 ENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA 153
NDN PVF+Q +Y + +L H+ + V A+DAD V
Sbjct: 2384 LNDNPPVFNQLLYEANISELAPR-----GHF-----VTCVKASDADTSDVG 2424
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 13/88 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N I+N + + +DRE Y L ITATD
Sbjct: 2955 VSYFITGGDPLGQFAVEN-----IQNEWK------VYVRKPLDREVKDNYLLNITATD-- 3001
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVY 115
G+ + V V VLD NDNSPV + +Y
Sbjct: 3002 GMFATKAVVEVKVLDSNDNSPVCEKMLY 3029
>gi|326673379|ref|XP_003199866.1| PREDICTED: protocadherin beta-15-like [Danio rerio]
Length = 807
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G++DRE +++Y++ ITATD + T ++ + V D NDN PVF Q+ YR V +
Sbjct: 405 LVTTGELDRELLSEYNITITATDEGSPPLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 464
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ K SSI SVSATD D
Sbjct: 465 ----------NNKAGSSICSVSATDPD 481
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 83/175 (47%), Gaps = 34/175 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET---HVTVDVLDENDNSPVFSQKVYRFIV 119
LV + ++DRE+ + +L++TA D ++ T HVTV LD NDN+PVFSQ VY+ +
Sbjct: 195 LVLNKELDREQQKEVTLILTAVDGGTPPRSGTVAIHVTV--LDANDNAPVFSQAVYKVSL 252
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPS----NLVVIVPQTGEL 172
+ NS V + + +VSATDAD + V Y S L V+ +G +
Sbjct: 253 PE-----NSPVD-----TVVVTVSATDADEGQNGVVNYGFGHVSQKILQLFVLDSVSGVI 302
Query: 173 LLTGDPPSDDVE-YELTVEAHDLQSPSRYA-----------REPAQVWLQFNSPV 215
L G +D EL V+A D Q + Y+ P + NSP+
Sbjct: 303 KLIGTIDYEDESIIELPVQAKDGQGLASYSNVLIDIVDANDNAPIIILKSLNSPI 357
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 20/149 (13%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVY 115
+S SGV+ + G ID E+ + L + A D +G+ + ++V +D++D NDN+P+ K
Sbjct: 296 DSVSGVIKLI-GTIDYEDESIIELPVQAKDGQGL-ASYSNVLIDIVDANDNAPIIILK-- 351
Query: 116 RFIVGDLKSSLNSNVSHWK-KFSSIGSVSATDADGD-----KVAYKLAVPSNLVVIVPQT 169
SLNS + + +G ++ D D + + + + VP LV +
Sbjct: 352 ---------SLNSPIPESALPGTEVGIINVQDRDSENNGQVRCSIQQNVPFKLVPSIKNY 402
Query: 170 GELLLTGDPPSDDV-EYELTVEAHDLQSP 197
L+ TG+ + + EY +T+ A D SP
Sbjct: 403 YSLVTTGELDRELLSEYNITITATDEGSP 431
>gi|229442257|gb|AAI72771.1| FAT tumor suppressor 1 precursor [synthetic construct]
Length = 1094
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + HP VRY I G+ + F + + +R T+
Sbjct: 45 ENSAAKTYV-GHPVKMGVYITHPAWEVRYKIVSGDSENLFKAEEYILGDFCFLRIRTKGG 103
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A T V V VLD ND P+FS Y
Sbjct: 104 NTAIL------NREVKDHYTLIVKALEKNTNVEARTKVRVQVLDTNDLRPLFSPTSYSV- 156
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 157 ------SLPENTAIR---TSIARVSATDADIGTNGEFYYSFKDRTDMFAIHPTSGVIVLT 207
Query: 176 G 176
G
Sbjct: 208 G 208
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 15/127 (11%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
+ R++ A + L +T +D KA T V V VL N N P F+Q Y K++ +
Sbjct: 426 VKRQQAAHFELEVTTSD----RKASTKVLVKVLGANSNPPEFTQTAY-------KAAFDE 474
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT 188
NV S+ +V + + V Y +A ++ VP + S++++YEL
Sbjct: 475 NVPIGTTVMSLSAVDPDEGENGYVTYSIANLNH----VPFAIDHFTGAVSTSENLDYELM 530
Query: 189 VEAHDLQ 195
+ L+
Sbjct: 531 PRVYTLR 537
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 36/185 (19%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+++ GN++ F + + ++G+L + S +DRE +Y+L IT D+
Sbjct: 754 YAVSGGNEDSCFMI------------DMETGMLKILS-PLDRETTDKYTLNITVYDLGIP 800
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
KA + V V+D NDN P F Q+ Y V + K + S I V ATD D
Sbjct: 801 QKAAWRLLHVVVVDANDNPPEFLQESYFVEVSEDK----------EVHSEIIQVEATDKD 850
Query: 149 ---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYE--LTVEAHDLQSPSRYARE 203
V Y + ++ I TG ++ P ++++E L +EA D ARE
Sbjct: 851 LGPNGHVTYSIVTDTDTFSIDSVTG-VVNIARPLDRELQHEHSLKIEARD------QARE 903
Query: 204 PAQVW 208
Q++
Sbjct: 904 EPQLF 908
>gi|426229721|ref|XP_004008935.1| PREDICTED: protocadherin beta-4 isoform 1 [Ovis aries]
Length = 796
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 107/253 (42%), Gaps = 45/253 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT TD K E ++TV V D NDN+P F+Q Y V +
Sbjct: 402 LVTDSPLDRESQAEYNITITVTDTGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLWVRE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYK-------LAVPSNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L ++LV I P G
Sbjct: 462 ----NNSPALH------IGSVSATDTDAGANAQVTYSLLPPPDPLLPLASLVSINPDNGH 511
Query: 172 LL-LTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQMIDR 227
L LT +E V A D SP+ ++ +V + N+P + L + +
Sbjct: 512 LFALTSLDYEALRAFEFRVGATDRGSPALSSQALVRVLVADANDNAPFV----LYPLQNA 567
Query: 228 KSEAPHRIEKRRVTRAVRP---TKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPW 284
+ P + V RA P ++ + D + + L K TE F + W
Sbjct: 568 SAPCP-----QLVPRAAEPGYLVTKVVAVDGDAGQNAWLSYQLLKATEPGLFGV-----W 617
Query: 285 ITVDENGDVRVKK 297
NG+VR +
Sbjct: 618 A---HNGEVRTAR 627
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 31/177 (17%)
Query: 28 VRYSITQGND--NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
V YS+ Q ++ TF++ N T EIR + + +D E++ Y + I ATD
Sbjct: 276 VSYSLFQASEEIKQTFSI-NEVTGEIRLTKK------------LDFEQIKSYQVEIEATD 322
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G++ T V ++V+D NDN+P + L SS+ N + SI +
Sbjct: 323 GGGLSGKGT-VVIEVVDVNDNAP-------ELTISSLISSIPENAP--ETVVSIFRIRDR 372
Query: 146 DADGDKVAYKLAVPSNLVVIVPQTGE--LLLTGDPPSD---DVEYELTVEAHDLQSP 197
D+ GD ++P NL I+ T + L D P D EY +T+ D +P
Sbjct: 373 DS-GDNGKMICSIPDNLPFILRPTFKNFYTLVTDSPLDRESQAEYNITITVTDTGTP 428
Score = 37.7 bits (86), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L +Y+I + H RN ++ K LV +DREE +++SL +TA D
Sbjct: 166 LQKYTINANSHFHVLT---------RNHSDGKKHPDLVQDKVLDREEQSEFSLTLTALDG 216
Query: 87 KGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
++ T V + ++D NDN+P F Y V + S LN S I +V A
Sbjct: 217 GSPPRSGTSMVRILIMDVNDNAPEFVHTPYEVQVLE-NSPLN---------SLILTVLAR 266
Query: 146 DADGDK---VAYKLAVPSNLV----VIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
D D V+Y L S + I TGE+ LT + ++ Y++ +EA D
Sbjct: 267 DVDAGNFGTVSYSLFQASEEIKQTFSINEVTGEIRLTKKLDFEQIKSYQVEIEATD 322
>gi|363746624|ref|XP_003643736.1| PREDICTED: protocadherin beta-4-like [Gallus gallus]
Length = 811
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 66/129 (51%), Gaps = 17/129 (13%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH 95
N T AL+ + +R + K+ LVT +DREE AQ+ +V+TA D TH
Sbjct: 373 NGEITCALEEQLSFALRPAF--KNYYELVTVSRLDREERAQHMVVVTAADAGSPPLTSTH 430
Query: 96 V-TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---K 151
+VD+ D NDN+PVF+Q Y V + +N +G+V ATDAD K
Sbjct: 431 TFSVDISDVNDNAPVFNQTSYTMYVHE------NNAPALL----VGAVKATDADAGPNAK 480
Query: 152 VAYKLAVPS 160
V+Y + VP+
Sbjct: 481 VSYSV-VPA 488
>gi|281345412|gb|EFB20996.1| hypothetical protein PANDA_000353 [Ailuropoda melanoleuca]
Length = 3819
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 24/158 (15%)
Query: 57 SKSGVLLVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVY 115
SK+ LVT G +DREE+ +Y++ + ATD K + T +T+ + D NDN+PVF Q Y
Sbjct: 398 SKNYYKLVTDGPLDREEIPEYNITVLATDRGKPPLSSSTSITLHIADVNDNAPVFGQAFY 457
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL--------VV 164
V + + +SI VSA+D D +V+Y + V S+L V
Sbjct: 458 LVHVAE----------NNPPGASIAQVSASDPDLGPNGRVSYSI-VASDLEPRALASYVS 506
Query: 165 IVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYA 201
+ Q+G + + + +ELT++A D SP+ A
Sbjct: 507 VSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSA 544
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 24/159 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKV 114
++K+ +LVT G +DRE++ +Y++ IT TD K + V ++++D NDN+PVF Q
Sbjct: 1852 DTKNTYMLVTDGVLDREQIPEYNITITVTDRGKPPLSSNRSVLLNIIDVNDNAPVFGQAF 1911
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL--------V 163
Y V + + +SI VSA+D D +V+Y + V S+L V
Sbjct: 1912 YLVHVAE----------NNPPGASIAQVSASDPDLGPNGRVSYSI-VASDLEPRALASYV 1960
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYA 201
+ Q+G + + + +ELT++A D SP+ A
Sbjct: 1961 SVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSA 1999
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT+ +DRE+V+ Y++ ITATD KGI ET + ++V D NDN P F Q Y +
Sbjct: 2673 LVTNTVLDREQVSLYNITITATD-KGIPPLSTETLIYLNVADTNDNPPAFPQSSYSVYIP 2731
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLA 157
+ + + +SI SV+A D D ++ Y L+
Sbjct: 2732 E----------NNPRGASIFSVTAHDPDSYENARITYSLS 2761
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 70/140 (50%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + + LV+TA D +++ T + V V D NDN PVF+Q VY
Sbjct: 1649 LVVKTPLDREEQSCHHLVLTAVDGGDPSRSSSTQIRVLVADANDNPPVFTQDVY------ 1702
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLV----VIVPQTGELLL 174
K+S+ N+ SS+ SV ATD D ++ Y N+V + +TG L
Sbjct: 1703 -KASVRENLPMG---SSVLSVMATDLDEGVNAEITYAFINTGNVVKQLFKLDSKTGVLTT 1758
Query: 175 TGDPPSDDVE-YELTVEAHD 193
G+ ++ E Y + VEA D
Sbjct: 1759 GGELDFEERESYTIGVEAKD 1778
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 14/99 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+T+ +DREE++ Y++ +T D E+H++++V D NDN P+F Y V
Sbjct: 1190 LLTTKALDREEISDYNITVTVIDCGNPPLSTESHISLNVADINDNPPIFPHTSYSTYV-- 1247
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA 157
L +N + SI SV+A D D KV Y LA
Sbjct: 1248 ----LENN----PRGLSILSVTAHDPDSGNNAKVTYSLA 1278
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 16/100 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINK--AETHVTVDVLDENDNSPVFSQKVYRFIVG 120
L+T+ ++DRE+ + Y++ + ATD G +ETH++V+V D NDN P F Q Y +
Sbjct: 3398 LMTAKNLDREKCSVYNITLKATD-GGTPPLYSETHISVNVADTNDNPPAFPQSSYSVYIP 3456
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLA 157
+ + + +SI SV+A D D ++ Y L+
Sbjct: 3457 E----------NNPRGASIFSVTAHDPDSYENARITYSLS 3486
Score = 44.7 bits (104), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYR 116
LV +DRE A + LV+TA D I + + V VLD NDN+PVF+Q VYR
Sbjct: 2463 LVLERPLDREGEAVHHLVLTAVDGGDPIRSSTARILVIVLDANDNAPVFTQPVYR 2517
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 54 STESKSGV------LLVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDN 106
S E KSG LV +DRE+VA + L++TA D I + H+ V VLD NDN
Sbjct: 965 SLEEKSGADGQKYPELVLERPLDREKVAVHDLLLTALDGGDPILSSTMHIRVMVLDANDN 1024
Query: 107 SPVFSQKVYRFIV 119
+P+F++ YR V
Sbjct: 1025 APLFTRSEYRVSV 1037
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 53/118 (44%), Gaps = 25/118 (21%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-----VKGIN 90
NDN F L T + R E LV +DREE + LV+TA D G
Sbjct: 173 NDNEHFDLTEKQTGDGRKYPE------LVLKHSLDREEQNFHQLVLTAVDGGDPPQSGTT 226
Query: 91 KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + HVT D NDN PVF Q +Y K SL V + FS + V+ATD D
Sbjct: 227 QIQIHVT----DANDNPPVFIQDIY-------KVSLQEGVP--RGFSVL-RVTATDQD 270
>gi|431892546|gb|ELK02979.1| Protocadherin gamma-B5 [Pteropus alecto]
Length = 670
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 24/160 (15%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTV--DVLDENDNSPVFSQ 112
+ SK+ LVT G +DRE+ +Y++ ITATD KG + +T+ + D NDN+PVF Q
Sbjct: 393 SSSKNSYKLVTDGPLDREQTPEYNVTITATD-KGKPPLSSSITITLHITDVNDNAPVFQQ 451
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVP-------SNL 162
Y V + + +SI VSA+D+D V+Y + S+
Sbjct: 452 SAYLVHVPE----------NNPPGASIAQVSASDSDLGPNGHVSYSIVASDLEPRALSSY 501
Query: 163 VVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYA 201
V + Q+G + + + +ELT++A D SP+ A
Sbjct: 502 VSVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSA 541
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 15/136 (11%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L+ +DRE+++ ++L++TA D T + V V D NDN P+F+Q +YR
Sbjct: 195 LILEKPLDREQLSYHNLILTALDGGDPPLSGTTELRVQVTDANDNRPIFNQDIYRV---- 250
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDP 178
SL NV +++ VSATD D ++ Y + + ++GE+
Sbjct: 251 ---SLRENVPLG---TTVLQVSATDLDEGVNSEITYSFYRTGQIFRLNSKSGEITTLRTL 304
Query: 179 PSDDV-EYELTVEAHD 193
+++ EY + VEA D
Sbjct: 305 DFEEIKEYSIVVEARD 320
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 57 SKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSP 108
SKSG + T +D EE+ +YS+V+ A D G+ A+ V +++ DENDNSP
Sbjct: 293 SKSGEI-TTLRTLDFEEIKEYSIVVEARDGGGL-VAQCTVEINIQDENDNSP 342
>gi|348583018|ref|XP_003477272.1| PREDICTED: protocadherin beta-3-like [Cavia porcellus]
Length = 797
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 51/88 (57%), Gaps = 13/88 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVG 120
LVT+ +DRE A+Y++ IT TD+ G + +T T+ VL D NDN+P F+Q Y V
Sbjct: 403 LVTNTALDRETTAEYNITITVTDL-GTPRLKTQHTITVLVSDVNDNAPTFTQSSYTLSVP 461
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ NS H IGSVSATD+D
Sbjct: 462 E----NNSPALH------IGSVSATDSD 479
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + SL +TA D ++ T + + VLD NDN+P F Q +Y + +
Sbjct: 194 LVLDKALDREEQPELSLTLTALDGGSPPRSGTAQIQILVLDINDNAPEFKQSLYEVQILE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLV----VIVPQTGELLL 174
++N S I +VSA+D D V+Y S V ++ P TG++LL
Sbjct: 254 -DRTIN---------SVILTVSASDLDTGTFGAVSYSFFHASEEVLKTFLLNPITGDILL 303
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+ + YE+ +EA D
Sbjct: 304 IKYLNFEAINTYEVDIEAKD 323
>gi|403255762|ref|XP_003920580.1| PREDICTED: protocadherin gamma-B2 [Saimiri boliviensis boliviensis]
Length = 822
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 57/117 (48%), Gaps = 12/117 (10%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+E++K GT P L S P+ L RY + NDN F L T + R E
Sbjct: 143 VESTKPGTTFPLDPAL--DSDVGPNSLQRYHL---NDNEYFDLAEKQTPDGRKYPE---- 193
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYR 116
L+ +DREE + LV+TA D ++ T + + V D NDN PVFSQ VYR
Sbjct: 194 --LILKHSLDREEHIFHQLVLTALDGGDPPQSGRTQILIQVTDANDNPPVFSQDVYR 248
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 32/205 (15%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQK 113
+ SK+ LVT G +DREE +Y+L ITATD K + V + + D NDN+PVF Q
Sbjct: 396 SSSKNYYKLVTDGALDREETPEYNLTITATDGGKPPLSSSIIVILHISDINDNAPVFQQN 455
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAV----PSNLVVIV 166
Y V + + +S+ +SA+D D +V+Y + P L+ V
Sbjct: 456 SYMVHVAE----------NNPPGASVAQISASDPDLGPNGQVSYSIVASDLEPQELLSYV 505
Query: 167 PQTGELLLTGDPPSDDVE----YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVL--- 216
+ + + + D E +ELT++A D SP+ A +V L N+P +
Sbjct: 506 SVSAQSGVVFAQRAFDHEQLRAFELTLQARDHGSPALSANVSLRVLVGDLNDNAPRVLYP 565
Query: 217 ----QDEQLLQMIDRKSEAPHRIEK 237
L M+ R +E + + K
Sbjct: 566 ALGPDGSALFDMVPRAAEPGYLVTK 590
>gi|317419390|emb|CBN81427.1| Protocadherin-15, partial [Dicentrarchus labrax]
Length = 1994
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 71/143 (49%), Gaps = 28/143 (19%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNST----ESKSGVLLVTSGDIDREEVAQYSLV 80
+Q + YSIT+GN+ TFAL N TT I + E+ S +L D S+
Sbjct: 1035 NQTIIYSITEGNEGGTFAL-NVTTGVISTAKPLDYEANSSYVLKVEAD---------SMR 1084
Query: 81 ITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSI 139
+ +++ + +K T V +D+LDEND+ PVFS+ +Y +G + K F+S+
Sbjct: 1085 VGSSNFRAPSKTNTAKVIIDILDENDHPPVFSRSLY---IGGVAED-------AKTFTSV 1134
Query: 140 GSVSATDADG---DKVAYKLAVP 159
V A D D + Y+L +P
Sbjct: 1135 LQVQALDKDTGNYSSMMYRLIIP 1157
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 102/258 (39%), Gaps = 38/258 (14%)
Query: 44 KNPTTHEIRNSTESKSGVL------LVTSGDIDREEVAQYSLVITATDVKGINKAETHVT 97
++P T+EI + VL LV +DRE + Y+LV+TA+D + V
Sbjct: 614 RDPITYEIHSGDRHGHFVLQQNSGYLVLDKPLDRESLDYYTLVVTASDGHPDGTSTATVN 673
Query: 98 VDVLDENDNSPVFSQKV----------YRFIVGDLKS---SLNSN-------VSHWKKFS 137
+ V D NDN P+F + VG +K+ L +N V+H K F
Sbjct: 674 IVVTDVNDNDPLFDSSLPVNLTVIEEQNHAYVGQVKAIDPDLGANGQVHYRLVNHQKSF- 732
Query: 138 SIGSVSATDADGDKVAYKLAVPSNLVVIVPQ-TGELLLTGDPPSDDVEYELTVEAHDLQS 196
S++AT A V V + +IV G + DP + +TV D S
Sbjct: 733 ---SINATGAIRTAVPLDREVKGHYFLIVEAWDGAV----DPRRSRLTLSVTVLDVDDNS 785
Query: 197 PSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETD 256
P + ++ V L NSP +D +LQ+ S IE R + F
Sbjct: 786 PI-FTQQTYNVSLPENSP--KDTVILQLKTLTSAPTSHIESELTARTRKSLSYSTFDPVT 842
Query: 257 GEMEGRIVFALEKETERE 274
GE+ V E T+ E
Sbjct: 843 GELSVLKVLDYEALTDSE 860
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 77 YSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
Y+ + A D +G + T VTV + D ND SPVFSQ VYR +V
Sbjct: 863 YTFTVEAMDTEGTMPLGLTSVTVRITDMNDFSPVFSQSVYRGMVA 907
>gi|344265588|ref|XP_003404865.1| PREDICTED: protocadherin gamma-A9-like [Loxodonta africana]
Length = 817
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 49/95 (51%), Gaps = 8/95 (8%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE A + LV+TA+D ++ T + V VLD NDN+PVF+Q VYR
Sbjct: 194 LVLERSLDREEEAAHHLVLTASDGGDPRRSSTVRILVTVLDTNDNAPVFAQPVYRV---- 249
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKL 156
L N+ + ++ + + KVAYK
Sbjct: 250 ---KLPENMPRGTRLLTVRAADPDEGANGKVAYKF 281
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 55/99 (55%), Gaps = 16/99 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
L+T+ +DRE+V++Y++ +TATD +G ET +T+ V D NDN P FS+ Y +
Sbjct: 404 LLTAQILDREKVSEYNITVTATD-RGTPPLSTETDITLHVADINDNPPAFSRASYSVYLP 462
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKL 156
+ + + +SI SV+A D D + +V Y L
Sbjct: 463 E----------NNPRGTSIFSVTAHDPDREENARVIYAL 491
>gi|326673385|ref|XP_003199868.1| PREDICTED: protocadherin gamma-A6-like [Danio rerio]
Length = 806
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G++DRE +++Y++ ITATD + T ++ + V D NDN PVF Q+ YR V +
Sbjct: 405 LVTTGELDRELLSEYNITITATDEGSPPLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 464
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ K SSI SVSATD D
Sbjct: 465 ----------NNKAGSSICSVSATDPD 481
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 82/175 (46%), Gaps = 34/175 (19%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET---HVTVDVLDENDNSPVFSQKVYRFIV 119
LV + ++DRE+ + +L++TA D ++ T HVTV LD NDN+PVFSQ VY+ +
Sbjct: 195 LVLNKELDREQQKEVTLILTAVDGGTPPRSGTVAIHVTV--LDANDNAPVFSQAVYKVSL 252
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPS----NLVVIVPQTGEL 172
+ NS V + + +VSATDAD +V Y S L + +G +
Sbjct: 253 PE-----NSPVD-----TVVVTVSATDADEGQNGEVTYAFGHVSQKLLQLFFLDSVSGVI 302
Query: 173 LLTGDPPSDDVE-YELTVEAHDLQSPSRYA-----------REPAQVWLQFNSPV 215
L G +D EL V+A D Q + Y+ P + NSPV
Sbjct: 303 KLIGPIDYEDESIIELPVQAKDGQGLASYSNVFIDIVDANDNAPIIILQSLNSPV 357
>gi|301753535|ref|XP_002912597.1| PREDICTED: protocadherin beta-8-like [Ailuropoda melanoleuca]
Length = 799
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 93/197 (47%), Gaps = 32/197 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L T +DRE A+Y++ IT TD+ K + +++V V D NDN+P FSQ Y V +
Sbjct: 403 LFTERPLDRETQAEYNITITVTDLGTPRLKTQHNLSVTVSDVNDNAPAFSQSSYTLRVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP--------SNLVVIVPQTG 170
NS H IGSVSATD D +V Y L +P ++LV I G
Sbjct: 463 ----NNSPALH------IGSVSATDRDAGANAQVTYSLLLPPHDPHLPLASLVSINADNG 512
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWL---QFNSP-VLQDEQ----- 220
+L + ++ +E V A D SP+ ++ +V + N+P VL Q
Sbjct: 513 QLFALRALDYEALQAFEFGVRAADRGSPALSSQALVRVLVVDDNDNAPFVLYPLQNGSAP 572
Query: 221 LLQMIDRKSEAPHRIEK 237
+++ R +EA + + K
Sbjct: 573 CTELVPRAAEAGYLVTK 589
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 71/145 (48%), Gaps = 19/145 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE+ ++ L +TA D ++ + ++V+D NDN+P F Q +YR V +
Sbjct: 194 LVLDKALDREQESELRLTLTAQDGGSPPRSGIAQIYIEVVDINDNAPEFQQPLYRVQVPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVV----IVPQTGELLL 174
+S + I +VSATD D +++Y L S+ + I +TGE+ L
Sbjct: 254 -----DSPIGFL-----IVTVSATDVDIGVNGEISYSLFQASDEICKTFEIHSETGEIRL 303
Query: 175 TGDPPSDDVE-YELTVEAHDLQSPS 198
+ + YE+ +EA D S S
Sbjct: 304 KKQLDFERIPFYEINIEARDAGSLS 328
>gi|301607021|ref|XP_002933123.1| PREDICTED: cadherin EGF LAG seven-pass G-type receptor 3-like
[Xenopus (Silurana) tropicalis]
Length = 3142
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 14/124 (11%)
Query: 33 TQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV---KGI 89
+Q N N + N +++SG L+ TSG +DRE+ +YSL++ A+D G
Sbjct: 284 SQANANIKYRFVNEQAAHSVFEIDARSG-LITTSGQVDREKREKYSLIVEASDQGKDPGP 342
Query: 90 NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
+ V + +LDENDN P FS+K R+IV ++ + K + I V+ATD D
Sbjct: 343 RSSTVKVDITILDENDNVPQFSEK--RYIV-QVREDI-------KTHTEIVRVTATDIDK 392
Query: 150 DKVA 153
D A
Sbjct: 393 DSNA 396
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 66/138 (47%), Gaps = 17/138 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+ SG +DRE V QY + A D + A VT+ ++D NDN P F+Q+ Y FI
Sbjct: 526 ITVSGPLDREMVEQYVFGVEARDHGNPSLSASAGVTITIMDVNDNRPEFTQREY-FI--- 581
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVPS--NLVVIVPQTGELLLTGDP 178
LN + + +S+ SV+A D D + Y++ + N I Q G L+T
Sbjct: 582 ---RLNEDAT---VGTSVLSVTAIDRDVNSAITYQITGGNTRNRYAISTQGGSGLITLSL 635
Query: 179 PSD---DVEYELTVEAHD 193
P D + Y LTV A D
Sbjct: 636 PLDYKQERRYVLTVTASD 653
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 85/188 (45%), Gaps = 31/188 (16%)
Query: 22 KHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVI 81
K + LV Y+I GN F++ + T V +VT D + E +Y+L +
Sbjct: 392 KDSNALVHYNIISGNSRGQFSIDSVTGE-----------VQIVTPLDFETER--EYTLRV 438
Query: 82 TATDV--KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSI 139
A D ++ +++ V+D ND++P+F ++ V + N+ + H SI
Sbjct: 439 RAQDAGRPPLSNNTGTISIQVVDVNDHAPIFVSTPFQVSVLE-----NAPLGH-----SI 488
Query: 140 GSVSATDAD---GDKVAYKLA--VPSNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
+ A DAD +V YKL P + VI TG + ++G + VE Y VEA D
Sbjct: 489 IHIQAIDADYGENSRVEYKLTGMKPESPFVINSATGWITVSGPLDREMVEQYVFGVEARD 548
Query: 194 LQSPSRYA 201
+PS A
Sbjct: 549 HGNPSLSA 556
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 24/155 (15%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA 83
P+ + Y I +GN F + + SG L D+D E +Y +V+ A
Sbjct: 916 PNAQIMYQIVEGNIPEIFQM------------DFFSGELTALI-DLDYEAKPEYVIVVQA 962
Query: 84 TDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
T +++A V + ++D+NDNSPV K ++ + + SN S+ IG +
Sbjct: 963 TSAPLVSRAT--VRIKLIDQNDNSPVL--KNFQILFNNYI----SNSSNTFPSGVIGKIP 1014
Query: 144 ATDAD-GDKVAYKLAVPS--NLVVIVPQTGELLLT 175
A D D D++ Y + +L+++ +GEL L+
Sbjct: 1015 AYDPDVSDRLLYTFERGNELSLLIVNHSSGELRLS 1049
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 88/209 (42%), Gaps = 33/209 (15%)
Query: 23 HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVIT 82
H + V+Y+ G+D PT+ IR T +DRE V Y L
Sbjct: 809 HSNGRVQYTFQNGDDGDGDFTIEPTSGIIR------------TVRKLDRESVPFYELTAY 856
Query: 83 ATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIG 140
A D +G+ ++ + V V D NDN+PVF + V + NS V S +G
Sbjct: 857 AVD-RGMPPLRSPVRIQVAVQDVNDNAPVFPADEFEVYVKE-----NSIVG-----SVVG 905
Query: 141 SVSATDAD---GDKVAYKLAVPSNLVVIVPQ---TGELLLTGDPPSD-DVEYELTVEAHD 193
+ ATD D ++ Y++ V N+ I +GEL D + EY + V+A
Sbjct: 906 KIKATDPDEGPNAQIMYQI-VEGNIPEIFQMDFFSGELTALIDLDYEAKPEYVIVVQATS 964
Query: 194 LQSPSRYAREPAQVWLQFNSPVLQDEQLL 222
SR + NSPVL++ Q+L
Sbjct: 965 APLVSRATVRIKLIDQNDNSPVLKNFQIL 993
>gi|262263228|tpg|DAA06605.1| TPA_inf: protocadherin gamma a10 isoform [Anolis carolinensis]
Length = 942
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 65/134 (48%), Gaps = 19/134 (14%)
Query: 69 IDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLN 127
+DRE Y L++ ATD + + ++V D NDN+P+F Q Y ++S+N
Sbjct: 202 LDRETQPIYDLILIATDGGDPVRSGTLQIHINVFDANDNAPIFGQSAY-------EASVN 254
Query: 128 SNVSHWKKFSSIGSVSATDAD-GDKVAYKLAVP------SNLVVIVPQTGELLLTGDPPS 180
N+ W ++I V ATD D G K + S + ++ TGE+LL G+
Sbjct: 255 ENIPKW---TTIAVVRATDLDEGINAEIKYSFQKITKKISQIFLLNSTTGEILLIGNLDY 311
Query: 181 DDVE-YELTVEAHD 193
++ YE V+A D
Sbjct: 312 EESSLYEFEVQATD 325
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
Query: 63 LVTSGDIDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVY 115
LVT +DREEVA Y++ ITA D ++ +ET +++ VLD NDN P+F + Y
Sbjct: 406 LVTERPLDREEVAAYNVTITAVDEGTPALSTSET-ISLKVLDTNDNPPLFVKSTY 459
>gi|198433098|ref|XP_002120736.1| PREDICTED: similar to FAT tumor suppressor 1 [Ciona intestinalis]
Length = 4828
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 29/171 (16%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+IT GN + F + +++GV+ + +DRE ++Y+L ++ +D+
Sbjct: 679 YTITSGNGDSCFNIN------------TQTGVISIVKL-LDRERTSRYNLTVSVSDMGSP 725
Query: 90 NK-AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
K A T +T+ V D NDN PVF Q ++F SL+ NV+ F ++ A+D D
Sbjct: 726 TKTAFTKITIIVADVNDNPPVFGQTRFKF-------SLHENVT--VGFVIQQNIWASDLD 776
Query: 149 GDK---VAYKL--AVPSNLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHD 193
+ ++Y L AV N I TG + + +DV EY+LTV A D
Sbjct: 777 EGRNANISYSLSSAVGGNKFAINKTTGFIKVMESLDREDVSEYKLTVIAKD 827
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 43/254 (16%)
Query: 66 SGDIDREEVAQYSLVITATDVKGI-----NKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+G+I R+ Q+S+ ITA D K N ET +TVDV N ++P + +V
Sbjct: 125 TGEISRKAQRQHSMQITAIDRKAALSGTANPTETTLTVDVRSVNAHAP-------KILVT 177
Query: 121 DLKSSLNSNVSHWKKFSSI--GSVSATDADGD---KVAYKLAV---PSNLVVIVP----Q 168
L++ N +F+ + +++ TD D D ++A+ V P L+ I P
Sbjct: 178 QLQTLENPAAFTGNQFNKVTCATLTITDPDSDNHGEIAFTRIVKGDPDGLIEIEPGNEPN 237
Query: 169 TGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRK 228
L+ + PP + LTVE D +P R +R Q+ Q+ DR
Sbjct: 238 EKRLVFSKRPPPINAVMNLTVEVSDNGTPPRSSRVGVQI---------------QLYDRD 282
Query: 229 SEAPHRIE---KRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWI 285
S P E + RV+ A ++ F GE + F++ R F+I I
Sbjct: 283 SFVPKFTEPSFRMRVSEASPRHTQVGFVNVTGESNA-VRFSIISGNGRRSFEINPHTGLI 341
Query: 286 TVDENGDVRVKKRW 299
T + D K +
Sbjct: 342 TTQRHLDRNAKAIY 355
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 42/216 (19%)
Query: 12 GLPILVASSHK---HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
GL +L S+H + +RYSIT GN++ F + N + EIR L+ T
Sbjct: 3243 GLVVLQVSAHSIDSGANAKLRYSITHGNEHGKFVI-NQDSGEIR---------LIAT--- 3289
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRF--------- 117
+D E Y L I+A D + N +E V + ++D NDN+PVF+ Y
Sbjct: 3290 VDYESDQSYVLTISAAD-RSSNPLSSECTVRIAIIDVNDNAPVFTATSYEVNFIPNATSL 3348
Query: 118 ----IVGDLKSSLNSNVSHWKKFS-SIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQT 169
+V S L +S + ++ +VSATD D + Y L ++ I P T
Sbjct: 3349 ARSKVVTASASDLEIEISEDAEIGRTVTTVSATDKDSGAAGNITYTLGSNTSPFKIHPVT 3408
Query: 170 GELLLTGDPPSDDVE----YELTVEAHDLQSPSRYA 201
G + +T P D E + + + A D P++ A
Sbjct: 3409 GAVTIT--EPGIDYETKQSFSIQIFATDHGLPAQSA 3442
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 18/150 (12%)
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
G + T G +D E+ Y L + A D A+ VT+ V D NDN P+F++ VY +
Sbjct: 2198 GGTITTMGSLDFEKRNHYQLRVRARDAASRAYADVEVTLRVTDINDNDPIFTENVYSHTL 2257
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPS----NLVVIVPQTGEL 172
+ + + + + V ATDAD ++Y + S +L +I +TG +
Sbjct: 2258 PE----------YTRVGTQVAKVEATDADSGAFGSLSYTILPGSEDVGSLFLIDLETGVI 2307
Query: 173 LLTGDPPSD-DVEYELTVEAHDLQSPSRYA 201
+ ++ E E V A D SP+RY
Sbjct: 2308 WTASNLDAETKSEMEFVVRASDGGSPARYC 2337
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 88/209 (42%), Gaps = 27/209 (12%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
++ +S+ P +V + + DN F + NPT H T SG++ T +DRE
Sbjct: 1942 VMESSTEIEPVVVVTVAGLELEDNIRFTILNPTPHFKIGIT---SGIIETTGVPVDRESN 1998
Query: 75 AQYSLVITATDVK------GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
Y +++ A DV + + V V + D NDN+P+F Y V
Sbjct: 1999 LAYEILVEAVDVNMPQNGGQVRRGRCIVNVTINDCNDNNPLFVGLPYYSTVQ-------- 2050
Query: 129 NVSHWKKFSSIGSVSATDAD---GDKVAYKLAVP-SNLVVIVPQTGELLLTGDPP----S 180
+ + V A DAD +V Y L+ S L I P TG + ++ P S
Sbjct: 2051 --VDALPHTFVKQVHAIDADTGLNGQVTYTLSGSYSELFTIDPVTGNITVSLTPAGVLGS 2108
Query: 181 DDVEYELTVEAHDLQSPSRYAREPAQVWL 209
++ + +T+ A D+ +P R ++ L
Sbjct: 2109 NNANFNITLTATDMGTPKRSGTSNLRISL 2137
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 16/115 (13%)
Query: 14 PILVASSHKHP-----------HQLVRYSITQG-NDNHTFALKNPTTHEIRNSTESKSGV 61
PI V++S +H H++V + QG N + T+ L++ ++ S ESK+GV
Sbjct: 3121 PIFVSTSLRHSTRENTPTNSSLHRVVAFDPDQGLNGSVTYQLRDNMNNQF--SIESKTGV 3178
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVT-VDVLDENDNSPVFSQKVY 115
L V + +DRE V Y + I A D + + T + + +LD NDN P+F Y
Sbjct: 3179 L-VLNKPLDRETVPSYQIEIIAIDDGTMRMSTTDILHLQILDVNDNPPIFDLNQY 3232
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 74/155 (47%), Gaps = 33/155 (21%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSG-----DIDREEVAQYSLVIT 82
++ IT GN + FA+ T+S+ LVT+G +DRE+ Y L I
Sbjct: 2946 IQVYITVGNSDGKFAVV----------TKSQKQKNLVTAGLQVVKSLDREDKDHYELTIL 2995
Query: 83 ATDVKGINKAETHVTVDVLDENDNSPVFSQKVYR-FIVGDLKSSLNSNVSHWKKFSSIGS 141
ATD G+ T V V + D NDN+P SQ YR F+ D + + I +
Sbjct: 2996 ATD--GLYTDTTVVHVTIGDINDNAPDCSQLEYRGFVREDAATQ-----------TLILN 3042
Query: 142 VSATDAD---GDKVAYKL-AVPSNLVVIVPQTGEL 172
+ +TDAD +V+Y+L S+ + P+TGEL
Sbjct: 3043 ILSTDADIGEAGRVSYQLTGTGSDQFNLDPRTGEL 3077
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 16/95 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
VR+SI GN +F + NP T L+ T +DR A Y+L + AT+V
Sbjct: 319 VRFSIISGNGRRSFEI-NPHTG------------LITTQRHLDRNAKAIYTLTVAATNVS 365
Query: 88 ---GINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
G T V +++ D ND+ P+F+ Y+ ++
Sbjct: 366 LVLGDALNTTTVVIEIEDANDHDPLFTDSTYKVVI 400
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 57/116 (49%), Gaps = 17/116 (14%)
Query: 65 TSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVL--DENDNSPVFSQKVYRFIVGDL 122
T+ ++D E ++ V+ A+D G VTV V+ D NDN P+F Q VY F +
Sbjct: 2309 TASNLDAETKSEMEFVVRASD-GGSPARYCDVTVRVIVNDVNDNPPIFDQSVYEFFIS-- 2365
Query: 123 KSSLNSNVSHWKKFSSIGSVSATD---ADGDKVAYKLAVPSNLVVIVPQ-TGELLL 174
S K S +G V A+D +D +K+ Y L S+ ++ + Q TG + L
Sbjct: 2366 --------SEAKAQSFVGKVLASDPDVSDKNKIRYSLRQTSDGMLEIDQPTGIITL 2413
Score = 40.8 bits (94), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 25/121 (20%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+R+ I G+D+ F L NS + LVT+G D E Y+L I A+D
Sbjct: 1322 IRFMIMAGDDDRMFHL---------NSQDGS----LVTAGYPDAEIQNFYNLTIWASD-- 1366
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G N ++ V + D ND+ PVF Q VY + + N+ V + + V+ATD
Sbjct: 1367 GYNNDVANIVVRIGDLNDHRPVFDQAVYEHTISE-----NTTVG-----TMVFQVTATDG 1416
Query: 148 D 148
D
Sbjct: 1417 D 1417
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 27/173 (15%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+E+++ G V G+ V P + YSI G FA+ T
Sbjct: 974 LESAEIGKTV-GIASAVDDDIGEPENSIGYSIVDGTGLGIFAIDENTG------------ 1020
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIV 119
++ TS +DRE Y L I ATD I + T V V+V + NDN+P+ +Q ++ F
Sbjct: 1021 -IITTSRQLDRETERFYWLTIKATDRGAIPLSGTMFVLVEVGNINDNAPIATQPIF-FAS 1078
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADG--DKVAYKLAVPSNLVVIVPQTG 170
S L S V V A D DG D + Y+++V + I TG
Sbjct: 1079 IRENSPLGSQVVQ---------VHAVDLDGDHDTIQYRMSVNNTYFKINTSTG 1122
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 59/134 (44%), Gaps = 26/134 (19%)
Query: 59 SGVLLVTSGDIDRE------EVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFS 111
SGV+ T+ IDRE VA IT TD G IN+ T V+V + D NDN PVF
Sbjct: 2508 SGVI-TTTQSIDRETIAVGHNVALVQFYITVTDEIGQINR--TLVSVKITDVNDNPPVFL 2564
Query: 112 QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYK----LAVPSNLVV 164
Q Y ++ V+ + +S + VS D D V Y L L+
Sbjct: 2565 QSSYGAVLV---------VTEAELYSKVLQVSTNDYDYGVNGSVRYSIVEDLNTAKELLT 2615
Query: 165 IVPQTGELLLTGDP 178
+ TGEL L +P
Sbjct: 2616 LDMDTGELTLRQNP 2629
>gi|292618185|ref|XP_002663585.1| PREDICTED: protocadherin alpha-2-like [Danio rerio]
Length = 807
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 101/224 (45%), Gaps = 45/224 (20%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET---HVTVDVLDENDNSPVFSQKVYRFIV 119
LV +DRE+ + LV+T+ D G A+T V V+VLD NDN PVFS+ +Y
Sbjct: 187 LVLQKPLDREKQSVIPLVLTSFD--GGKPAKTGTLSVIVNVLDINDNWPVFSKPLY---- 240
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSN-----LVVIVPQTGE 171
K + NV K I S++ATD D + Y +A N L +VP+ G+
Sbjct: 241 ---KGKVRENVPVGTK---IISLTATDLDEGTNSDIIYSIAEHGNSKKQSLFTVVPENGD 294
Query: 172 LLLTGDPPSD-DVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSE 230
+++ G+ + + EL V+A D SP + Q + L++++D
Sbjct: 295 IVVKGEIDHELNAAIELRVQARDKGSPPKST---------------QCKVLIEVMDENDN 339
Query: 231 APHRIEKRRV------TRAVRPTKRIDFSETDGEMEGRIVFALE 268
AP I R + T++ + S+ DG G + AL+
Sbjct: 340 APEIIVTRLLESVKEDTKSGTAVALVTVSDKDGGKNGIVHCALK 383
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKV 114
LV G +DRE V+QY++ ITA D +G + T +TV + D NDN+P F V
Sbjct: 400 LVVDGPLDRESVSQYNITITAAD-EGTPPLSSSTVITVHISDVNDNAPHFPAPV 452
>gi|156382383|ref|XP_001632533.1| predicted protein [Nematostella vectensis]
gi|156219590|gb|EDO40470.1| predicted protein [Nematostella vectensis]
Length = 2676
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 113/278 (40%), Gaps = 51/278 (18%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
EN++ G + L + S K + R+ I QGN + F++ SG
Sbjct: 609 FENTRIGQSICQLKAIDRDSPKF--AITRFIIEQGNADEVFSVDG-------------SG 653
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKG---INKAETHVTVDVLDENDNSPVFSQKVYRF 117
L+ + +DRE Y L + A D G +NKA ++TV LD ND P+FS+ Y F
Sbjct: 654 -LITLAKLLDRETQDNYLLTVKAVDGGGQDSVNKAIVNITV--LDVNDEPPIFSKAEYNF 710
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVP-SNLVVIVPQTGELL 173
+ + H + S IG V A D +V Y ++ ++ +V++ TG L
Sbjct: 711 TIQE----------HSQALSVIGHVHAISRDKGTNAEVVYSISKGNTDNIVLINSTGTLY 760
Query: 174 LTGDPPSDDV-EYELTVEAHDLQSPSRYAREP---AQVWLQFNSPVLQDEQLLQMIDRKS 229
L + + + LTV+A D +P + A + + NSP +L + +
Sbjct: 761 LQSEVDHEKIPSLYLTVQAKDKGTPPLFGYANVTIAVIDINDNSPQFNSSSILVRLPEDT 820
Query: 230 EAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFAL 267
H V A D + GR+ F+L
Sbjct: 821 PIGHTFYTVSVFDA------------DSGVLGRVSFSL 846
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 71/145 (48%), Gaps = 20/145 (13%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVT----VDVLDENDNSPVFSQKVYRF 117
L+ T+ IDREE+++YSL + ATD + + T + + D NDN+P F + +
Sbjct: 1386 LIQTTHPIDREEISEYSLKVRATDQAFTEQDRLYNTATLKIIIQDLNDNAPKFVSRNLTY 1445
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVP-SNLVVIVPQTGELL 173
++ D N V+ S++A D D G V Y++ P + + +TG L
Sbjct: 1446 VMED--EPFNFQVT---------SITALDPDTGQGGNVEYRIVSPDTGKFSLDLKTGVLK 1494
Query: 174 LTGDPPSDDV-EYELTVEAHDLQSP 197
L G +DV +Y L + A DL SP
Sbjct: 1495 LIGSLDYEDVPQYTLHISATDLGSP 1519
Score = 43.9 bits (102), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 14/96 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI GN + F + T L T+ +DRE A Y L + A D+
Sbjct: 1680 VLYSIMSGNTDGAFTIGRSTGE-------------LSTTTKLDRETKASYQLSVQAKDIT 1726
Query: 88 G-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
A ++T+ + D+NDN PVF Q +Y + +L
Sbjct: 1727 PPYYTAFANITIFIEDQNDNPPVFQQSLYSSTISEL 1762
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 121/285 (42%), Gaps = 51/285 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI++GN ++ + NST G L + S ++D E++ L + A D K
Sbjct: 738 VVYSISKGNTDNIVLI---------NST----GTLYLQS-EVDHEKIPSLYLTVQAKD-K 782
Query: 88 GINK--AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G +VT+ V+D NDNSP F+ ++ ++ + H + +VS
Sbjct: 783 GTPPLFGYANVTIAVIDINDNSPQFNSSSIL-----VRLPEDTPIGH-----TFYTVSVF 832
Query: 146 DADGD---KVAYKL-AVPSNLVVIVPQTGELLLTG--DPPSDDVEYELTVEAHDLQSPSR 199
DAD +V++ L + P L + TG L LT D + Y L V+A D SP R
Sbjct: 833 DADSGVLGRVSFSLLSNPGTLFNLDSNTGALSLTKLIDYGNSARSYTLPVQAQDGGSPPR 892
Query: 200 YAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEM 259
+ A + L+ V+ + S H +E T + ++ D
Sbjct: 893 SST--AMLELK----VVDVNDYSPVFGNWSYTAHVLE---TTPPDSNIIEVVATDVDSGE 943
Query: 260 EGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEEL 304
GRI +A + + + KF +R+ G + +K + D E++
Sbjct: 944 NGRISYAFDSKVDTSKFGLRN---------GGKIFIKSKLDREDI 979
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 60/121 (49%), Gaps = 18/121 (14%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQKV 114
++G + +DRE++ +Y+L + A D + + A+ V VD D NDN+P F Q
Sbjct: 963 RNGGKIFIKSKLDREDIEEYNLKVIAIDHGTPRRSSSADVKVIVD--DVNDNNPHFQQAS 1020
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGE 171
Y F V + N V+ + +G+VSA+D+D V Y+ ++ QTG+
Sbjct: 1021 YAFFVKE-----NEPVATY-----LGAVSASDSDEGSNGHVTYRFDTQVAQFIVDKQTGK 1070
Query: 172 L 172
+
Sbjct: 1071 I 1071
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 94/245 (38%), Gaps = 51/245 (20%)
Query: 46 PTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK-GINKAETHVTVDVLDEN 104
P+ E+ + K L+VT+ +DRE+ Y L + AT V + T V ++V+D N
Sbjct: 1581 PSGVEMDKFSIDKHSGLIVTNSILDREKKDTYFLTVHATGVSYPFRVSSTSVRINVMDRN 1640
Query: 105 DNSPVF--------------SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD 150
DN P F ++ +Y V DL N+ V + S+ + + DG
Sbjct: 1641 DNPPKFISPVVTLKVPENSPARLIYTLTVQDLDYGNNTKVLY--------SIMSGNTDG- 1691
Query: 151 KVAYKLAVPSNLVVIVPQTGELLLTGDPPSD-DVEYELTVEAHDLQSPSRYAREPAQVWL 209
A+ + TGEL T + Y+L+V+A D+ P A +++
Sbjct: 1692 --AFTIG---------RSTGELSTTTKLDRETKASYQLSVQAKDITPPYYTAFANITIFI 1740
Query: 210 Q---FNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFA 266
+ N PV Q I + I + S+ D G IV+
Sbjct: 1741 EDQNDNPPVFQQSLYSSTISELTPPGTSI------------LNLTASDKDSGSNGNIVYT 1788
Query: 267 LEKET 271
L +T
Sbjct: 1789 LSNDT 1793
Score = 37.7 bits (86), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 11/86 (12%)
Query: 41 FALKNPTTHEIRNSTESKSGV----------LLVTSGDIDREEVAQYSLVITATDVKGIN 90
F + + I N+TES+S + ++ T+ D+DRE++ Q L + D
Sbjct: 418 FGSNSELVYTIANTTESRSYLHWFAIDPSSGMITTATDLDREQIPQVVLTVLVHDRGSPP 477
Query: 91 KAE-THVTVDVLDENDNSPVFSQKVY 115
++ V V++ D NDN P F+Q Y
Sbjct: 478 LSDNCSVIVNLTDSNDNDPYFNQSSY 503
>gi|363745762|ref|XP_003643407.1| PREDICTED: protocadherin beta-4-like, partial [Gallus gallus]
Length = 492
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 66/129 (51%), Gaps = 17/129 (13%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH 95
N T AL+ + +R + K+ LVT +DREE AQ+ +V+TA D TH
Sbjct: 368 NGEITCALEEQRSFSLRPAF--KNYYELVTVSTLDREERAQHMVVVTAADAGSPPLTSTH 425
Query: 96 V-TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---K 151
+VD+ D NDN+PVF+Q Y V + +N +G+V ATDAD K
Sbjct: 426 TFSVDISDVNDNAPVFNQTSYTMYVHE------NNAPALL----VGAVKATDADAGPNAK 475
Query: 152 VAYKLAVPS 160
V+Y + VP+
Sbjct: 476 VSYSV-VPA 483
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 52 RNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVF 110
R +ES+ V L+ +DREE + + ATD ++ T + + VLD NDN PVF
Sbjct: 172 RTQSESEMHVDLILEKPLDREEQPEMDFTLIATDGGSPPRSGSTQIHIVVLDVNDNVPVF 231
Query: 111 SQKVY 115
+QKVY
Sbjct: 232 TQKVY 236
>gi|71067087|ref|NP_001014773.1| protocadherin gamma-A7 [Rattus norvegicus]
gi|50512410|gb|AAT77600.1| protocadherin gamma a7 [Rattus norvegicus]
gi|149017328|gb|EDL76379.1| rCG49295, isoform CRA_o [Rattus norvegicus]
Length = 934
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 65/126 (51%), Gaps = 23/126 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT+ ++DRE+++ Y++ + ATD GI ETH+++ V D NDN P FS Y V
Sbjct: 406 LVTAQNLDREKMSMYNITLKATD-GGIPPLSTETHMSIHVSDTNDNPPTFSDSSYSIYVP 464
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLA------VP-SNLVVIVPQTG 170
+ + + +SI SV+A D D DK + Y LA VP S+ + I TG
Sbjct: 465 E----------NNPRGASIFSVTAQDPDSDKNAQITYALAEDSIQGVPVSSYISINSDTG 514
Query: 171 ELLLTG 176
L G
Sbjct: 515 VLYALG 520
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 22/175 (12%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ L RY ++ NH F+L ++N + LV +DREE + LV+TA
Sbjct: 167 NSLQRYQLSP---NHHFSLV------VQNGDDGTKYPELVLEKALDREEEGLHHLVLTAY 217
Query: 85 DVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D + + V V+D ND++PVFS Y ++++ NV + ++ ++
Sbjct: 218 DGGDPLRSGTASIHVTVVDVNDHTPVFSLPRY-------QATVPENVPVGTRLLTVNAID 270
Query: 144 ATDADGDKVAYKL--AVPSNLVV--IVPQTGEL-LLTGDPPSDDVEYELTVEAHD 193
+ +V Y P L + + TGEL L G + YEL V+A D
Sbjct: 271 LDEGIYGEVTYSFWKITPELLQMFHLSSLTGELSTLKGLDYEESSFYELEVQAQD 325
>gi|301753509|ref|XP_002912641.1| PREDICTED: protocadherin gamma-B2-like [Ailuropoda melanoleuca]
Length = 844
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 79/158 (50%), Gaps = 24/158 (15%)
Query: 57 SKSGVLLVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVY 115
SK+ LVT G +DREE+ +Y++ + ATD K + T +T+ + D NDN+PVF Q Y
Sbjct: 398 SKNYYKLVTDGPLDREEIPEYNITVLATDRGKPPLSSSTSITLHIADVNDNAPVFGQAFY 457
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL--------VV 164
V + + +SI VSA+D D +V+Y + V S+L V
Sbjct: 458 LVHVAE----------NNPPGASIAQVSASDPDLGPNGRVSYSI-VASDLEPRALASYVS 506
Query: 165 IVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYA 201
+ Q+G + + + +ELT++A D SP+ A
Sbjct: 507 VSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSA 544
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 53/118 (44%), Gaps = 25/118 (21%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-----VKGIN 90
NDN F L T + R E LV +DREE + LV+TA D G
Sbjct: 173 NDNEHFDLTEKQTGDGRKYPE------LVLKHSLDREEQNFHQLVLTAVDGGDPPQSGTT 226
Query: 91 KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ + HVT D NDN PVF Q +Y K SL V + FS + V+ATD D
Sbjct: 227 QIQIHVT----DANDNPPVFIQDIY-------KVSLQEGVP--RGFSVL-RVTATDQD 270
>gi|66773264|ref|NP_001019345.1| protocadherin 2 gamma 1 precursor [Danio rerio]
gi|51557437|gb|AAU06405.1| protocadherin cluster 2 gamma 1 [Danio rerio]
Length = 948
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 51/87 (58%), Gaps = 11/87 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT+G++DRE + +Y++ ITATD + T ++ + V D NDN PVF Q+ YR V +
Sbjct: 405 LVTTGELDRELLFEYNITITATDEGSPPLSSTKNIHLTVADVNDNPPVFQQQNYRAHVQE 464
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD 148
+ K SSI SVSATD D
Sbjct: 465 ----------NNKAGSSICSVSATDPD 481
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 40/233 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV + ++DRE+ + +L++TA D ++ T + V VLD NDN+PVFSQ VY+ + +
Sbjct: 195 LVLNKELDREQQKELTLILTAVDGGTPPRSGTVAIHVTVLDANDNAPVFSQAVYKVSLPE 254
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPS----NLVVIVPQTGELLL 174
NS V + + +VSATDAD +V Y S L + +G + L
Sbjct: 255 -----NSPVD-----TVVVTVSATDADEGQNGEVTYAFGHVSQKLLQLFFLDSVSGVIKL 304
Query: 175 TGDPPSDDVE-YELTVEAHDLQSPSRYA-----------REPAQVWLQFNSPVLQDE--- 219
G +D EL V+A D Q + ++ P + NSPV +
Sbjct: 305 IGPIDYEDESIIELPVQAKDGQGLASFSNVFIDIVDANDNAPIIILQSLNSPVPESALPG 364
Query: 220 ---QLLQMIDRKSEAPHRIE---KRRVTRAVRPTKRIDFS-ETDGEMEGRIVF 265
++ + DR SE ++ ++ V + P+ + +S T GE++ ++F
Sbjct: 365 TEVGIINVQDRDSENNGQVRCSIQQNVPFKLVPSIKNYYSLVTTGELDRELLF 417
>gi|328703039|ref|XP_003242076.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog isoform
1 [Acyrthosiphon pisum]
gi|328703043|ref|XP_003242078.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog isoform
3 [Acyrthosiphon pisum]
Length = 4140
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 131/296 (44%), Gaps = 45/296 (15%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+EN SGT + + + + P+ V YSI + F + N T
Sbjct: 2572 LENQLSGTVI--IRVQAIDNDTGPYGEVSYSIPSKKMSKIFNINNITGE----------- 2618
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+++ +DREEV+ Y L + A D +G T V V V DENDNSP RF++
Sbjct: 2619 --IISRMPLDREEVSLYELNVLACD-QGARCGYTLVRVRVSDENDNSP-------RFLLP 2668
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKL--AVPSN---LVVIVPQTGELLL- 174
+ K+ ++S++ F ++ +V ++ Y + PS+ L+ + TG L+L
Sbjct: 2669 EYKTCIHSSLPVNTGFLTVKAVDDDQEPSGQITYSINDIEPSDITKLMTVNKYTGALVLL 2728
Query: 175 -TGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSP------VLQDEQLLQMIDR 227
T + ++V Y+ + A D SP R + P ++++ SP LQ++Q + +
Sbjct: 2729 KTVESLKNNV-YQFFIRATDNGSPPRQSDVPIELFVL--SPEDLPPVFLQEDQKFNLTE- 2784
Query: 228 KSEAPHRIEKRRVTRAVRPTKRIDFSETDGEM-----EGRIVFALEKETEREKFKI 278
S + ++ V +I SE ++ +G+I A + E++ F I
Sbjct: 2785 NSPIGTIVTTVKLVSQVETKYKITASEETAKLFTINDQGQITVAGLLDREKQAFHI 2840
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 21/120 (17%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN SGT VK L SS + + + +G+ FA+ NP+T GV
Sbjct: 1738 ENEPSGTVVKRLQARSTSS-------LLFELVEGDTYSLFAV-NPST-----------GV 1778
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L VT +D E Y+L +TAT++ G +KA HV+V VLD NDNSP Y+ ++ +
Sbjct: 1779 L-VTRRPLDYESCHVYNLSVTATNMAG-SKAVCHVSVHVLDRNDNSPELVNTSYKGVISE 1836
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 25/170 (14%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA----TDVKGINK 91
N++ F++ NP++H ST +G+L T DRE Y +++ D + +
Sbjct: 2071 NEHLLFSISNPSSHFQIGST---TGILSTTGIAFDREVKEIYQIIVQVQSMDADSESLRV 2127
Query: 92 AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GD 150
A + V +LD NDN+P+F Y IV S+++ KK + V A D D G+
Sbjct: 2128 AHVPINVTILDINDNAPMFVNLPYYAIV-----SIDA-----KKDDLVTKVHAVDLDQGE 2177
Query: 151 KVAYKLAV---PSNLVVIVPQTGELLLTGDPPSDD----VEYELTVEAHD 193
A + + P L + TGE+ L + S + E++LTV A D
Sbjct: 2178 NAAVRYELTKGPGELFRVSRSTGEIFLRHNLESQNNGRISEFKLTVAAFD 2227
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 64/140 (45%), Gaps = 28/140 (20%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
+P+ + + +L+ YSI GN FA+ T LL ++D E
Sbjct: 2270 IPLTIRADSPLARKLI-YSIVAGNTFEEFAIDFNTG-------------LLYAVDNLDYE 2315
Query: 73 EVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
+V Y+L + ATD V G++ AE V++ V D ND +P F Q Y N ++S
Sbjct: 2316 QVQHYTLTVRATDSVSGVS-AEVLVSIMVTDVNDCAPEFYQDSY-----------NISIS 2363
Query: 132 HWKKFSS-IGSVSATDADGD 150
F S I V+ATD D D
Sbjct: 2364 ESASFGSFILRVTATDNDTD 2383
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 18/91 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI GN+++ F++ S++GV+ V +D E V Y L I ATD+
Sbjct: 3321 VVYSIAGGNEHNKFSIN------------SETGVISVFEM-LDYERVRDYLLTIQATDLG 3367
Query: 88 G---INKAETHVTVDVLDENDNSPVFSQKVY 115
N+A ++T +LD NDN+P+F Q Y
Sbjct: 3368 EPPLSNQAMVNIT--ILDANDNAPIFGQLAY 3396
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 109/270 (40%), Gaps = 46/270 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+++S+ DNH S SG++ + + +DRE Y++ + A D
Sbjct: 3217 LKFSLQDSADNHFI-------------ISSDSGIVTL-AKKLDRETCETYNISVKAIDQG 3262
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+ T + V VLD NDN P+F Q+ Y V ++ + +++ V+ V AT
Sbjct: 3263 SPPLSSLTQLHVIVLDVNDNPPIFVQRTYYATVSEI-APIDTEVTR---------VLATS 3312
Query: 147 ADGDK---VAYKLAVPS--NLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPSRY 200
D K V Y +A + N I +TG + + + V +Y LT++A DL P
Sbjct: 3313 LDSGKNAEVVYSIAGGNEHNKFSINSETGVISVFEMLDYERVRDYLLTIQATDLGEPPLS 3372
Query: 201 AREPAQVWL---QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDG 257
+ + + N+P+ ID + K T + D
Sbjct: 3373 NQAMVNITILDANDNAPIFGQLAYTTQIDEDVHVGEVVIKVSAT------------DLDS 3420
Query: 258 EMEGRIVFALEKETEREKFKIRDENPWITV 287
E+ G+I +AL K ++F I ITV
Sbjct: 3421 ELNGKIRYALVKGDHHQQFAIDSFTGNITV 3450
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 16/94 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY++ +G+ + FA+ + T + + + +DRE+V+ Y+L I ATD
Sbjct: 3426 IRYALVKGDHHQQFAIDSFTGN-------------ITVAKPLDREQVSTYNLQIRATD-S 3471
Query: 88 GINKAETH--VTVDVLDENDNSPVFSQKVYRFIV 119
G+ + + V V V D NDN P+FSQ Y V
Sbjct: 3472 GVPELMSFALVQVQVNDVNDNPPLFSQHNYSAFV 3505
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 15/92 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN FA+ + +G++ T +DRE +++ L +T D
Sbjct: 1202 ITYKITTGNPQSLFAIS------------ANTGLITTTGRKLDRETESEHILEVTVID-D 1248
Query: 88 GIN--KAETHVTVDVLDENDNSPVFSQKVYRF 117
G+ + T V + V D NDN+P +K YRF
Sbjct: 1249 GVPVLSSTTSVVIAVEDVNDNAPEMLKKAYRF 1280
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 38/182 (20%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
+ + +SGV+ V +DRE +A++ L + D +K V + V+D ND++P FS
Sbjct: 1566 AVDYQSGVVSVQQP-LDRESIARHELTVVVKDQSTPSKKNFARVVITVIDSNDHAPEFS- 1623
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKF------SSIGSVSATDAD-GDKVAYKLAVPS----N 161
SN+ + F +S+ + ATD D G+ A + S N
Sbjct: 1624 ---------------SNIVQGRVFETTAVGTSVLQLLATDKDHGENAAVSYQIISGNIGN 1668
Query: 162 LVVIVPQTGELLLTGD-PPSDDVEYELTVEAHDLQSPSRYAREPAQVWL--------QFN 212
+ I + G L L + S EY L V+A D SP Y+ P + + +FN
Sbjct: 1669 VFSIDSKLGTLHLMKELDMSVSSEYTLIVKAVDSGSPPLYSTIPVYIMVVMADNAPPKFN 1728
Query: 213 SP 214
+P
Sbjct: 1729 NP 1730
Score = 37.7 bits (86), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 113/283 (39%), Gaps = 67/283 (23%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAE----THVTVDVLDENDNSPVFSQKVYRF 117
LL T+ +DRE ++Y+L V+ K+E + V + +LD NDN+P+F
Sbjct: 3132 LLKTAVTLDRELQSRYNL---EAHVQDREKSEWECISKVEITMLDINDNAPLF------- 3181
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSV----SATDAD---GDKVAYKLA-VPSNLVVIVPQT 169
S N+N + + + IG++ ATDAD K+ + L N +I +
Sbjct: 3182 ------ISNNNNTASLSEDAQIGTIVIKMHATDADIGLNRKLKFSLQDSADNHFIISSDS 3235
Query: 170 GELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRK 228
G + L + E Y ++V+A D SP P+ QL ++
Sbjct: 3236 GIVTLAKKLDRETCETYNISVKAIDQGSP----------------PLSSLTQLHVIVLDV 3279
Query: 229 SEAPHRIEKRRVTRAVRPTKRIDFSET-------DGEMEGRIVFALEKETEREKFKIRDE 281
++ P +R V ID T D +V+++ E KF I E
Sbjct: 3280 NDNPPIFVQRTYYATVSEIAPIDTEVTRVLATSLDSGKNAEVVYSIAGGNEHNKFSINSE 3339
Query: 282 NPWITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
I+V FE L E+ D+ +TI QAT+ G
Sbjct: 3340 TGVISV-------------FEMLDYERVRDYLLTI--QATDLG 3367
>gi|307175878|gb|EFN65693.1| Protocadherin-15 [Camponotus floridanus]
Length = 1377
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 79/178 (44%), Gaps = 30/178 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI GND FA+ + KSGV+ V +DRE++ +Y L+I A D
Sbjct: 431 VSYSIVSGNDLRQFAIGD------------KSGVITVIR-KLDREDLTRYQLLIKAEDTG 477
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G+ T V + V D ND +P F Y F +V + IG V A DA
Sbjct: 478 GLFSTAT-VNIMVTDINDKNPEFMDLPYEF-----------SVKEGEARKLIGRVHAEDA 525
Query: 148 D-GDKVAYKLAVPSNLVVIV-PQTGELL--LTGDPPSDDVEYELTVEAHDLQSPSRYA 201
D G P ++ IV P+TG++L + D ++ EY+ V A D R A
Sbjct: 526 DEGINAEITYFAPDDIPFIVDPETGDVLTKIVLDYEQNN-EYKFVVTARDGAPDYRLA 582
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 15/122 (12%)
Query: 76 QYSLVITATDVKGINKAETHVTVDVL-DENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWK 134
QYS+ + ATD KG ++T V V+V+ N SPVF Q VY V + +S+NS V+
Sbjct: 365 QYSITVQATD-KGGRYSQTIVEVNVIPGPNTRSPVFQQPVYEVQVSE-GASINSTVA--- 419
Query: 135 KFSSIGSVSATDADGDKVAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDV-EYELTVEA 191
+++A D + D V+Y + ++L I ++G + + +D+ Y+L ++A
Sbjct: 420 ------TITAIDPENDPVSYSIVSGNDLRQFAIGDKSGVITVIRKLDREDLTRYQLLIKA 473
Query: 192 HD 193
D
Sbjct: 474 ED 475
>gi|432902021|ref|XP_004076995.1| PREDICTED: cadherin-5-like [Oryzias latipes]
Length = 760
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 60/118 (50%), Gaps = 15/118 (12%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
ME SK GT V + A + +++YS+ +G D F++ + TT EI +
Sbjct: 144 MERSKIGTFVTKVTATDADDPSTANGVLKYSLAKGGDVSAFSI-SETTGEISCKVNT--- 199
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINK---AETHVTVDVLDENDNSPVFSQKVY 115
+DRE +QY++V+ A D++G+ A T VT+ + D NDN+P F + Y
Sbjct: 200 --------LDRESRSQYTVVVKAQDLRGLASGITATTSVTITITDANDNTPSFRKPKY 249
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 72/153 (47%), Gaps = 26/153 (16%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVTVDVLDENDNSPVFSQ 112
T + G L VT+ +DRE+ A Y+L D K N E H + V D NDNSPVFSQ
Sbjct: 80 TVDRGGDLFVTTS-LDREKKASYNLTARMYD-KDNNLVEDAGHFVIHVTDINDNSPVFSQ 137
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA-----YKLAVPSNLVV--I 165
+I+ +S + + V+ V+ATDAD A Y LA ++ I
Sbjct: 138 TFNGYIME--RSKIGTFVT---------KVTATDADDPSTANGVLKYSLAKGGDVSAFSI 186
Query: 166 VPQTGELLL---TGDPPSDDVEYELTVEAHDLQ 195
TGE+ T D S +Y + V+A DL+
Sbjct: 187 SETTGEISCKVNTLDRESRS-QYTVVVKAQDLR 218
>gi|297295313|ref|XP_001088244.2| PREDICTED: protocadherin gamma-B2-like [Macaca mulatta]
Length = 824
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 57/116 (49%), Gaps = 12/116 (10%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++K GT P L S P+ L RY + NDN F L T + R E
Sbjct: 157 ESTKPGTTFPLDPAL--DSDVGPNSLQRYHL---NDNEYFDLAEKQTPDGRKYPE----- 206
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYR 116
L+ +DREE + + LV+TA D ++ T + + V D NDN PVFSQ VYR
Sbjct: 207 -LILKHSLDREEHSFHQLVLTAVDGGDPPQSGTTQIRIQVTDANDNPPVFSQDVYR 261
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 96/206 (46%), Gaps = 34/206 (16%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQK 113
+ SK+ L+T G +DREE+ +Y+L ITATD K + VT+ + D NDN+P+F Q
Sbjct: 409 SSSKNYYKLMTDGALDREEIPEYNLTITATDGGKPPLSSSIIVTLHISDVNDNAPLFQQT 468
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL-------- 162
Y V + + +SI +SA+D D +V+Y + V S+L
Sbjct: 469 CYMVHVAE----------NNPPGASIAQISASDPDLGPNGQVSYSI-VASDLEPREILSY 517
Query: 163 VVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVW---LQFNSPVL-- 216
V + Q+G + + + +ELT++A D SP+ A +V L N P++
Sbjct: 518 VSVSAQSGVVFAQRAFDHEQLRAFELTLQATDQGSPALSANVSLRVLVGDLNDNVPLVLY 577
Query: 217 -----QDEQLLQMIDRKSEAPHRIEK 237
L M+ R +E + + K
Sbjct: 578 PALGPDGSALFDMVPRAAEPGYLVTK 603
>gi|269995989|ref|NP_001019300.2| protocadherin beta-11 precursor [Pan troglodytes]
Length = 797
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 69/143 (48%), Gaps = 24/143 (16%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+DRE A+Y++ IT TD+ GI K E + TV V D NDN+P F+Q Y V S
Sbjct: 409 LDRESTAEYNITITVTDL-GIPRLKTEHNTTVLVSDVNDNAPTFTQTSYTLFV----SEN 463
Query: 127 NSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGELLLTG 176
NS H IGSVSATD D +V Y L P ++LV I G L
Sbjct: 464 NSPALH------IGSVSATDRDSGTNAQVNYSLLPPQDPHLPLASLVSINADNGHLFALR 517
Query: 177 DPPSDDVE-YELTVEAHDLQSPS 198
+ ++ +E V A D SP+
Sbjct: 518 SLDYEALQAFEFRVGATDRGSPA 540
>gi|157118805|ref|XP_001653269.1| cadherin [Aedes aegypti]
gi|108875581|gb|EAT39806.1| AAEL008421-PA [Aedes aegypti]
Length = 1736
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 25/160 (15%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
++V + + V+Y +T GND F++ +SGV+ V +DRE++
Sbjct: 626 VIVVKAEDPENDPVKYFVTTGNDLRQFSIG------------KESGVISVIR-KLDREDL 672
Query: 75 AQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWK 134
+Y L+I A D G+ + T V + V D ND +P F + V +I V +
Sbjct: 673 TRYQLIIRAEDSGGLASSAT-VNIKVTDINDKNPEFDENVLPYIF---------TVDEGR 722
Query: 135 KFSSIGSVSATDAD-GDKVAYKLAVPSNLVV-IVPQTGEL 172
+ IG+V ATDAD G +PS++ I +TGE+
Sbjct: 723 DNALIGTVHATDADEGMNAEITYTIPSDIPFKINSRTGEI 762
>gi|363746707|ref|XP_001235607.2| PREDICTED: protocadherin beta-14-like, partial [Gallus gallus]
Length = 460
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 55/102 (53%), Gaps = 15/102 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHV-TVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DREE AQ+ +V+TA D TH +VD+ D NDN+PVF+Q Y V +
Sbjct: 341 LVTVSTLDREERAQHMVVVTAADAGSPPLTSTHTFSVDISDVNDNAPVFNQTSYTMYVHE 400
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVPS 160
+N +G+V ATDAD KV+Y + VP+
Sbjct: 401 ------NNAPALL----VGAVKATDADAGPNAKVSYSV-VPA 431
>gi|444705648|gb|ELW47051.1| Protocadherin Fat 1 [Tupaia chinensis]
Length = 4584
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 119/282 (42%), Gaps = 34/282 (12%)
Query: 23 HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVIT 82
H V Y I GN F + NP + I T +D E + Y+L I
Sbjct: 1686 HSQSSVVYEIKDGNIADAFDI-NPHSGSI------------FTQKALDFETLPVYTLTIQ 1732
Query: 83 ATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSV 142
T++ G++ T + V + DENDN PVF Q Y ++ + +S+NS V + + +
Sbjct: 1733 GTNMAGLS-TNTTLLVHLQDENDNQPVFMQTEYTGLISE-SASINSVVLTDRNVPLV--I 1788
Query: 143 SATDADGDK---VAYKLAVPSN--LVVIVPQTGEL--LLTGDPPSDDVEYELTVEAHDLQ 195
ATDAD + + Y + PS I P TG + +L D + + TV+ HD+
Sbjct: 1789 RATDADKESNALLVYHIVEPSGRKYFAIDPSTGAVRAVLRLD-YEETSTFHFTVQVHDMG 1847
Query: 196 SPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRK-SEAPHRIEKRRVTRAVRPTKRIDFSE 254
P +A A V + V+ + R EA + + R + ++ ++
Sbjct: 1848 VPRLFAEYAANVTIH----VIDINDCPPVFSRSLYEASLLLPTYKGVRVL----TVNATD 1899
Query: 255 TDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296
D ++++++ + EKF + + ITV +R +
Sbjct: 1900 ADSNTSSQLMYSITEGNIGEKFSMDYKTGTITVQNTTQLRSR 1941
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS + T V G P+ + +P +RY I G++ + F + + +R T+
Sbjct: 41 ENSAAKTYV-GHPVKMGIYITNPSWELRYKIVSGDNENLFKAEEYVLGDFCFLRIRTKGG 99
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ +L +RE Y+L++ A + +A T V V VLD ND P+FS Y
Sbjct: 100 NTAIL------NREVKDHYTLIVKAVEKNTNAEARTKVRVRVLDTNDLRPLFSPTSYSV- 152
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLT 175
SL N + +SI VSATDAD + Y +++ I P +G ++LT
Sbjct: 153 ------SLPENTAVR---TSIARVSATDADIGTNGEFYYSFRDRTDMFAIHPTSGVVVLT 203
Query: 176 G 176
G
Sbjct: 204 G 204
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ YSIT GN F + +P E++ + +DRE ++ Y+L + A+D
Sbjct: 3366 IHYSITDGNQGSPFTI-DPVKGEVK------------VTKLLDRETISGYTLTVQASDNG 3412
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIV 119
+ T V +DV D NDN+PVFSQ Y I+
Sbjct: 3413 NPPRVNTTTVNIDVSDVNDNAPVFSQGNYSVII 3445
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN F++ K+G++ TS +DRE+ ++ L +T TD
Sbjct: 1170 LMYKITSGNPQGFFSI------------HPKTGLITTTSRKLDREQQDEHILEVTVTDNG 1217
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRF 117
++ V V +LDENDN P F QK Y+
Sbjct: 1218 SPPRSTIARVIVKILDENDNKPQFLQKFYKI 1248
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 26/121 (21%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
YSI+ GN++ F + + ++G+L + S +DRE +Y+L +T D+
Sbjct: 750 YSISGGNEDSCFVI------------DMETGMLKILS-PLDRETTDKYTLNVTVYDLGVP 796
Query: 90 NKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSS-IGSVSATDA 147
KA H+ + VLD NDN+P F Q+ Y F+ VS K+ SS I V ATD
Sbjct: 797 QKAAWHLLDIRVLDANDNAPEFLQESY-FV----------EVSEDKELSSEIIQVEATDK 845
Query: 148 D 148
D
Sbjct: 846 D 846
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 30/199 (15%)
Query: 9 GVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGD 68
G + L + AS + + YSI GN++ F++ + T + +R S + ++ S
Sbjct: 3240 GTEVLQVYAASRDIEANADITYSIISGNEHGKFSIDSKTGN-LRGS------IFIIES-- 3290
Query: 69 IDREEVAQYSLVITATD--VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E +Y L + ATD ++ T V+++V D NDN+PVFSQ F+V + + L
Sbjct: 3291 LDYESSHEYYLTVEATDGGTPSLSDVAT-VSINVTDINDNTPVFSQDT--FVVSE-DAVL 3346
Query: 127 NSNVSHWKKFSSIGSVSATDADG---DKVAYKL--AVPSNLVVIVPQTGELLLTGDPPSD 181
S+ +V A DADG + Y + + I P GE+ +T +
Sbjct: 3347 E---------QSVITVMADDADGPSNSHIHYSITDGNQGSPFTIDPVKGEVKVTKLLDRE 3397
Query: 182 DVE-YELTVEAHDLQSPSR 199
+ Y LTV+A D +P R
Sbjct: 3398 TISGYTLTVQASDNGNPPR 3416
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 108/255 (42%), Gaps = 48/255 (18%)
Query: 50 EIRNSTESKSGV----------LLVTSGDIDREEVAQYSLVITATDVKGINKAET--HVT 97
EIR S SGV ++ TS +DRE Y L + ATD +G+ + +
Sbjct: 1064 EIRYSIRDGSGVGVFRIDEETGVIETSDRLDRESTPHYWLTVYATD-QGVVPLSSFIEIY 1122
Query: 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAY 154
++V D NDN+P S+ VY V + + K S+ + A D D DK+ Y
Sbjct: 1123 IEVEDVNDNAPQTSEPVYYPEV----------MENSPKDVSVVQIEAFDPDSSSDDKLMY 1172
Query: 155 KLAV--PSNLVVIVPQTGELLLTG---DPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL 209
K+ P I P+TG + T D D E+ L V D SP R A+V +
Sbjct: 1173 KITSGNPQGFFSIHPKTGLITTTSRKLDREQQD-EHILEVTVTDNGSPPR--STIARVIV 1229
Query: 210 QF-----NSP-VLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRI 263
+ N P LQ +++ +R E P R KR P R+ ++ D I
Sbjct: 1230 KILDENDNKPQFLQKFYKIRLPER--EKPERNSKR------EPLYRVVATDKDEGPNAEI 1281
Query: 264 VFALEKETEREKFKI 278
+++E+ E KF I
Sbjct: 1282 SYSIEEGNEHGKFFI 1296
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 77/173 (44%), Gaps = 32/173 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V Y IT G+ FA++N ++N + + +DRE+ Y L ITATD
Sbjct: 2948 VTYFITGGDALGQFAIEN-----VQNEWK------VYVKKPLDREKRDNYLLSITATD-- 2994
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
G ++ V V VLD NDNSPV + +Y ++ + K I VSATDA
Sbjct: 2995 GTFSSKAIVEVKVLDANDNSPVCEKTLY-------ADTIPEDAPPGKL---IMQVSATDA 3044
Query: 148 D---GDKVAYKL-AVPSNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAHD 193
D ++ Y L + + P TGEL P D E Y L V+A D
Sbjct: 3045 DIRSNAEITYTLYGSGAEKFKLNPDTGELKTLA--PLDREEQAIYNLVVKATD 3095
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 15/127 (11%)
Query: 69 IDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNS 128
I R++ + + L +T +D KA T V V VL N N P F+Q Y K+S +
Sbjct: 422 IKRQQASHFELEVTTSD----RKASTRVLVKVLGTNSNPPEFTQTAY-------KASFDE 470
Query: 129 NVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT 188
NV S+ +V + + V Y +A +++ ++ + T S++++YEL
Sbjct: 471 NVPIGTTVMSVSAVDPDEGENGYVTYSIANLNHVPFVIDHFTGAVST----SENLDYELM 526
Query: 189 VEAHDLQ 195
+ L+
Sbjct: 527 PRVYTLR 533
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 14/97 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
L T +DREE A Y+LV+ ATD G + ++ + + D NDN+P FS Y V
Sbjct: 3073 LKTLAPLDREEQAIYNLVVKATDGGG-RFCQANIVLTLEDVNDNAPEFSADPYTITV--- 3128
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKL 156
+ + + + V ATDAD K++Y L
Sbjct: 3129 -------FENTEPGTLLTRVQATDADAGLNRKISYSL 3158
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 10/90 (11%)
Query: 69 IDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSL 126
+D E+ Q+ + + A D G+ ++ +TVDV D NDN P+F Q++Y ++ +
Sbjct: 2342 LDYEQFQQHRISVRAVD-GGMPPLSSDVIITVDVTDLNDNPPLFDQQIY-------EARI 2393
Query: 127 NSNVSHWKKFSSIGSVSATDADGDKVAYKL 156
+ + H + + + A +D DK+ Y +
Sbjct: 2394 SEHAPHGHFVTCVKACDADSSDVDKLEYSI 2423
>gi|332234720|ref|XP_003266553.1| PREDICTED: protocadherin beta-4 [Nomascus leucogenys]
Length = 795
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 80/175 (45%), Gaps = 34/175 (19%)
Query: 37 DNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH- 95
DN F LK PT K+ LVT +DRE A+Y++ IT TD+ G + +T
Sbjct: 386 DNLPFILK-PTL---------KNFYTLVTERPLDRETSAEYNITITVTDL-GTPRLKTQQ 434
Query: 96 -VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---K 151
+TV V D NDN+P F+Q Y V + NS H IGSV ATD D +
Sbjct: 435 TITVQVSDVNDNAPAFTQTSYTLFVRE----NNSPALH------IGSVKATDRDSGTNAQ 484
Query: 152 VAYKLAVP-------SNLVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
V Y L P ++LV I G L + ++ +E V A D SP+
Sbjct: 485 VTYSLLPPQDPHLPLASLVSINADNGHLFALRSLDYEALQAFEFRVGATDRGSPA 539
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 90/203 (44%), Gaps = 32/203 (15%)
Query: 1 MENSKSGTGVKGLPILVASSHK-HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKS 59
+ENS+ GT P+L+A + L +Y+I+ + H RN +E K
Sbjct: 142 LENSQPGTL---FPLLIAEDLDVGSNGLQKYTISPNSHFHILT---------RNHSEGKK 189
Query: 60 GVLLVTSGDIDREEVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFI 118
LV +DREE ++SL + A D ++ T V + ++D NDN+P F Y
Sbjct: 190 YPDLVQDKPLDREEQPEFSLTLVALDGGSPPRSGTVMVRILIMDINDNAPEFVHTPYGVQ 249
Query: 119 VGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLV----VIVPQTGE 171
V + NS + S I V ATD D V+Y L S+ + I TGE
Sbjct: 250 VLE-----NSPLD-----SPIIRVLATDVDAGNFGSVSYGLFQASDEIKQTFSINEFTGE 299
Query: 172 LLLTGDPPSDDVE-YELTVEAHD 193
+LL + ++ Y + +EA D
Sbjct: 300 ILLKKQLDFEKIKSYHVEIEATD 322
>gi|345327140|ref|XP_001505705.2| PREDICTED: protocadherin Fat 4 [Ornithorhynchus anatinus]
Length = 1703
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 52/185 (28%), Positives = 82/185 (44%), Gaps = 27/185 (14%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
L + A P+ + Y I GN+ FA+ T EIR++ +DRE
Sbjct: 368 LAVAAADRDSGPNGQLDYGIVAGNEEGHFAIHR-ATGEIRSTRP------------LDRE 414
Query: 73 EVAQYSLVITATDVKGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
V +Y L + A+D ++ T V V+VLDEND+SP FSQ +S+ N
Sbjct: 415 SVPRYRLTVRASDRGDPPRSATARVVVNVLDENDHSPRFSQL--------FSASVPENAP 466
Query: 132 HWKKFSSIGSVSATDADGDKVA--YKLAVPSNLVVIVPQTGELLLTGDPPSDDV-EYELT 188
F+ + ++ + +G Y +A I P TG++ ++ +DV Y +
Sbjct: 467 --VGFTVTRATTSDEDEGQNAVSRYSIADSGLPFAIDPSTGDITVSRPLDREDVARYRIR 524
Query: 189 VEAHD 193
V AHD
Sbjct: 525 VSAHD 529
Score = 51.6 bits (122), Expect = 5e-04, Method: Composition-based stats.
Identities = 70/269 (26%), Positives = 115/269 (42%), Gaps = 42/269 (15%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L+ Y+++ GN FA+ + +GVL + +G +D E + + ++ATD
Sbjct: 801 LLAYAVSAGNGEGLFAVN------------ASTGVLTL-AGALDYETGRSHEVTVSATD- 846
Query: 87 KGINKAET---HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
G A T VTVDVLD NDN PVF+ Y V + S + + ++
Sbjct: 847 -GGWAARTGFCAVTVDVLDVNDNPPVFAGAEYTPEVAENAPS----------GTPVVTLR 895
Query: 144 ATDADGDK---VAYKL-AVPSNLVVIVPQTGELLLTGDPPSDD-VEYELTVEAHDLQSPS 198
ATDAD VAY L +L + P TG + G + E+ LTV+A ++
Sbjct: 896 ATDADSGPNAVVAYALHEADGDLFAVDPNTGVVSTQGFLDYETRREHRLTVKAFNVPDEE 955
Query: 199 RYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGE 258
R A F + ++ + + I R A + E P ++ + D
Sbjct: 956 RCA---------FAAVTVRVTGVNEYIPRFVSAAYGFEVSEAAPPGTPVGQVFAGDRDRG 1006
Query: 259 MEGRIVFALEKETEREKFKIRDENPWITV 287
+G + + L E+ R+ F++ E I+V
Sbjct: 1007 PDGEVSYLLFGESRRKGFRVERETGQISV 1035
Score = 41.6 bits (96), Expect = 0.50, Method: Composition-based stats.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 15/114 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDL 122
+ S +DRE+VA+Y + ++A D T V V V D NDN+P F + Y +L
Sbjct: 507 ITVSRPLDREDVARYRIRVSAHDSGW--TVSTDVAVAVTDVNDNAPRFREPSYFLECPEL 564
Query: 123 KSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELL 173
+ S + V+ATD D +V Y L PS + TGE+
Sbjct: 565 P----------EVGSGVARVAATDPDEGPNGQVFYLLKSPSEFFRVDAVTGEIF 608
Score = 40.8 bits (94), Expect = 0.77, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 21/117 (17%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E++ +GT V L + + + LV Y +T G + NP+T +I
Sbjct: 53 EDAPAGTDV--LLANCSDADASSNALVSYQLTGGESQFSI---NPSTGQI---------- 97
Query: 62 LLVTSGDIDREEVAQYSLVITATDVK---GINKAETHVTVDVLDENDNSPVFSQKVY 115
+TSG +DRE A Y+L++ A D ++ + T V V V D NDN P F Y
Sbjct: 98 --ITSGPLDRETQANYTLIVVARDGGDPLALSSSAT-VLVSVADVNDNPPRFQHHPY 151
Score = 40.4 bits (93), Expect = 1.2, Method: Composition-based stats.
Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 34/178 (19%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATD---VKGINKAETHVTVDVLDENDNSPVFSQ 112
E ++G + V +G +DRE +L + A + ++G + E V V VLD ND PVF
Sbjct: 1027 ERETGQISV-AGPLDREREGTVALRVLAKNAGPIRGADVDEVAVNVTVLDAND-PPVFGA 1084
Query: 113 KVYRFIVGD----------LKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNL 162
+ YR + + + ++ +V W +F S A GD +
Sbjct: 1085 ETYRVRISEGVPPGTHVTFVGAADADSVPAWSRF----SYRVGPAGGDAFS--------- 1131
Query: 163 VVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVL 216
+ PQTG++ +T + + Y LTV A D +P R V L+ N PVL
Sbjct: 1132 --VHPQTGQVTVTAPLDRETLPVYNLTVLAVDTGTPPATGRAVLLVTLEDVNDNGPVL 1187
>gi|224068302|ref|XP_002191697.1| PREDICTED: protocadherin beta-4-like [Taeniopygia guttata]
Length = 813
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 65/134 (48%), Gaps = 16/134 (11%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
VR + N + AL++ + +R + K+ LVT +DREE QY L +TA D
Sbjct: 365 VRDRDSGANGKISCALEDQLSFSLRPAY--KNYYELVTVSALDREETPQYILSVTAADAG 422
Query: 88 GINKAETHV-TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
T TVD+ D NDN+PVF+Q Y V + +NV +G+VSA D
Sbjct: 423 SPPLTSTQTFTVDISDVNDNAPVFNQTSYTMYVHE------NNVPTVF----VGAVSAGD 472
Query: 147 AD---GDKVAYKLA 157
AD KV Y LA
Sbjct: 473 ADVGLNAKVTYSLA 486
>gi|162138884|ref|NP_001104607.1| protocadherin alpha 7 precursor [Gallus gallus]
gi|45790055|gb|AAS77411.1| cadherin-related neuronal receptor 7 [Gallus gallus]
Length = 989
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 121/274 (44%), Gaps = 55/274 (20%)
Query: 36 NDNHTFALKNPTTH---EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA 92
N ++ L +P+ H +I++ ++K + LV + +DRE ++++ LV+TA+D G A
Sbjct: 163 NAQLSYTL-SPSEHFALDIKSKDKNKVSIALVLTHPLDRESLSEHRLVLTASD--GGRPA 219
Query: 93 ET---HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD- 148
T + + VLD NDN+P F+Q VY K L + F + +ATD D
Sbjct: 220 LTGTVQLVISVLDANDNAPQFNQSVY-------KVQLPEDAIPGTVFLHL---TATDKDE 269
Query: 149 ---GD-KVAYKLAVPSN---LVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRY 200
G+ A+ VP L +I +GE+ G+ +DV+ Y+L +EA D +P
Sbjct: 270 GINGEIYYAFSETVPEKMKELFIIDRTSGEMRTAGELDFEDVQSYDLEIEAGDKGTPPLS 329
Query: 201 AR------------EPAQVWL-QFNSPVLQDE------QLLQMIDRKSEAPHRIEKRRVT 241
+VW+ + PV +D LL + DR S P+ RV
Sbjct: 330 GHCNVELEVLDVNDNAPEVWVTSLSVPVPEDAALGTVVALLSVSDRDS-GPN----GRVR 384
Query: 242 RAVRPTKRIDFSETDGEMEGRIVFALEKETEREK 275
AVRP T G L + +RE+
Sbjct: 385 CAVRPPSPFGLVAT---FAGSYSLVLREALDRER 415
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 107/254 (42%), Gaps = 39/254 (15%)
Query: 65 TSGDIDREEVAQYSLVITATDVKGINKAETHVTVD--VLDENDNSPVFSQKVYRFIVGDL 122
T+G++D E+V Y L I A D KG H V+ VLD NDN+P +V+
Sbjct: 302 TAGELDFEDVQSYDLEIEAGD-KGTPPLSGHCNVELEVLDVNDNAP----EVW------- 349
Query: 123 KSSLNSNVSHWKKFSS-IGSVSATDADGD-----KVAYKLAVPSNLVVIVPQTGELLLTG 176
+SL+ V + + +S +D D + A + P LV + L+L
Sbjct: 350 VTSLSVPVPEDAALGTVVALLSVSDRDSGPNGRVRCAVRPPSPFGLVATFAGSYSLVLRE 409
Query: 177 DPPSDDV-EYELTVEAHDLQSP----SRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEA 231
+ V EYE+ V A D +P SR R P + N+P ++A
Sbjct: 410 ALDRERVSEYEVEVRAEDGGAPPLRASRGLRVPVSD-VNDNAPAF------------AQA 456
Query: 232 PHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVD-EN 290
+ + R A R+ + D GR+ +++ + R + +++VD E+
Sbjct: 457 VYTVLARENNAAGAELARLWARDPDEAGNGRVSYSVAEGGAGTGSGWRPASSYVSVDAES 516
Query: 291 GDVRVKKRWDFEEL 304
G +R + D+EEL
Sbjct: 517 GRLRALRPLDYEEL 530
>gi|390481094|ref|XP_003736070.1| PREDICTED: protocadherin beta-16-like [Callithrix jacchus]
Length = 839
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 71/149 (47%), Gaps = 24/149 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQKVYRFIVG 120
LVT +DRE A+Y++ +T TD+ G + +T VTV + D NDN P F+Q Y V
Sbjct: 442 LVTERALDREAKAEYNITVTVTDM-GTPRLQTEYSVTVQISDVNDNVPAFTQTSYTLFVR 500
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTG 170
+ NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 501 E----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDTHLALASLVSINADNG 550
Query: 171 ELLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 551 HLFALRSLDYEALQAFEFRVGATDRGSPA 579
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 18/120 (15%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV ++DREE Q L +TA D ++ T V ++V+D NDN+P F Q +Y+ + +
Sbjct: 233 LVLDKELDREEEPQLRLTLTALDGGSPPRSGTTQVRIEVVDSNDNAPEFEQPIYKVQIPE 292
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP----SNLVVIVPQTGELLL 174
NS + S + +VSA D D K++Y L P S + + P TGE+ L
Sbjct: 293 -----NSPLG-----SLVATVSARDLDSGANGKISYTLFQPSEDISKTLEVNPMTGEIRL 342
>gi|348524542|ref|XP_003449782.1| PREDICTED: protocadherin-23-like [Oreochromis niloticus]
Length = 3262
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 74/138 (53%), Gaps = 17/138 (12%)
Query: 40 TFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVD 99
T++ + ++ I + + +GV+ +T +D EE +Y+L + A+D I++ V V
Sbjct: 2277 TYSFSDNSSTNIPFAIDRYTGVITLTRA-LDYEEQTEYTLTVWASD--SIHQTNGEVKVQ 2333
Query: 100 VLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYK- 155
VLD NDN+PVF+Q Y+ + +L S+ F + SVSATD D + K++Y+
Sbjct: 2334 VLDVNDNAPVFTQDSYQVELSELVSA--------DTF--VMSVSATDRDSELNGKISYRL 2383
Query: 156 LAVPSNLVVIVPQTGELL 173
L+ P I P+ G +
Sbjct: 2384 LSSPLQGFYIQPEDGSIF 2401
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 57/115 (49%), Gaps = 14/115 (12%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L S ++D E ++Y + AT+ N A VTV VLD NDN+PVFS+ VY F V
Sbjct: 1038 LYLSANLDYETESKYHFRVLATEAALSNTTAMATVTVLVLDINDNAPVFSRDVYYFTV-- 1095
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELL 173
L+ S + +G+V A D D K ++Y L I +TGE++
Sbjct: 1096 LEGSSPQGL--------VGTVKAVDKDSGKNGQLSYLLLSDGKFFRINTKTGEII 1142
Score = 44.7 bits (104), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y+IT+GN+ F L+ +I N ++ ++L + +DRE Y+L ++ +D +G+
Sbjct: 2487 YTITRGNEEKRFCLEVKMV-QIENQIKNVGKLVLCNA--LDRETTESYALTVSVSD-RGM 2542
Query: 90 N--KAETHVTVDVLDENDNSPVFSQKVY 115
+ T V V V D NDN+PVFS Y
Sbjct: 2543 PPLNSSTVVMVTVTDCNDNAPVFSSTEY 2570
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 16/118 (13%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
ENS++GT + + A+ Q + Y+I GN+N F++ N T EIR ++
Sbjct: 2047 ENSRAGTWIAKVE---ANEQSSSRQRITYTIFSGNENQVFSI-NRHTGEIRVQKDNS--- 2099
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+D E LV+ A G+ A V++ ++D NDN+P F YR V
Sbjct: 2100 -------LDFEVNPHIQLVVLAD--SGLQTAHCRVSITLVDINDNAPQFEHSSYRTAV 2148
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 70/158 (44%), Gaps = 43/158 (27%)
Query: 2 ENSKSGTGVKGLPILVASSHKHP----HQLVRYSITQGNDNHTFALKNPTTHEIRNSTES 57
ENS+ GT LV S P + LVRY I GN L +
Sbjct: 2576 ENSQLGTK------LVQVSAHDPDLGTNGLVRYDIISGNSKGHLKL------------DP 2617
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH------VTVDVLDENDNSPVFS 111
+SG LLV + +D E+ ++Y L I A+D G +E H V + VLDENDN+P F
Sbjct: 2618 QSG-LLVVNNSLDYEKDSKYILTIRASD--GGKSSENHKVAFTIVFITVLDENDNTPYF- 2673
Query: 112 QKVYRFIVGDLKSSLNSNV-SHWKKFSSIGSVSATDAD 148
+ ++N +V + F+ + SV A D D
Sbjct: 2674 ----------MFPTVNCSVLENLPAFTHVCSVHAVDND 2701
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 68/152 (44%), Gaps = 28/152 (18%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
V YS+T N F L + T IR T+ +DRE AQYSL ATD
Sbjct: 1864 VTYSLTDDNSQGAF-LIDAFTGAIR------------TTRSLDRESRAQYSLRAVATDGC 1910
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
+G + VT+ V D NDN PV Q + V +++ N V+ +V+AT
Sbjct: 1911 TQGPLSSLASVTIQVEDVNDNMPVCEQTPFNAWVS-MRTLPNQIVT---------TVTAT 1960
Query: 146 DAD---GDKVAYKLAVPSNLVVIVPQTGELLL 174
D D + Y L+ NL I +TGE+ L
Sbjct: 1961 DRDQGENGTIHYALSDEENLFDINTETGEISL 1992
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 79/176 (44%), Gaps = 31/176 (17%)
Query: 30 YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGI 89
Y IT+ + F L + R+ +E+ + LV + +DRE Y+L I A D GI
Sbjct: 160 YRITESEMSDLFHL------DYRSGSENHLSLDLVLNSKLDREAQDLYTLTIEAFD-GGI 212
Query: 90 --NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
V + VLDENDN PVF+Q Y V + S++ V ATD
Sbjct: 213 PARTGTLQVNIHVLDENDNPPVFNQTEYHTSVRE----------DAPIMSAVCQVQATDY 262
Query: 148 D-GD--KVAYKL----AVPSNLVVIVPQTGELLLTGDPPSD---DVEYELTVEAHD 193
D GD ++ Y++ + PS + I TG + L + P D +EL + A D
Sbjct: 263 DLGDNGRLTYEINRRQSDPSEVFSINETTGVVYL--NKPLDFETQAFHELIINARD 316
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 73/164 (44%), Gaps = 41/164 (25%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
VRYSI + N + + + +SG L+ T+ +DRE + ++ A D
Sbjct: 486 VRYSILKSNQDSLIDI------------DPESG-LVTTAAALDRETQMEIWFLVVAVDGG 532
Query: 88 GINKAETH-VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS----V 142
+ T VTV V D NDN PVF Q++Y NVS ++ S +GS V
Sbjct: 533 EPALSSTATVTVLVEDVNDNEPVFEQQLY-------------NVSILEQ-SDVGSCFLQV 578
Query: 143 SATDADGDKVAYKLAVPSN---------LVVIVPQTGELLLTGD 177
+ATDAD + L S+ L I P TGEL ++ D
Sbjct: 579 AATDADSPEFGTLLYSLSDGFDKQATHPLFQINPHTGELCVSQD 622
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 16/97 (16%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD- 85
+V +SI GN F L E K+G+LL+T+ +D E + L + A D
Sbjct: 1549 IVSFSIISGNKKGLFTL------------EEKTGLLLLTA-PLDYETERFHRLTVRALDQ 1595
Query: 86 -VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
+ ++ +T +TV+V D ND +PVFSQ +Y V +
Sbjct: 1596 GLPSLSSTQT-LTVEVGDVNDQAPVFSQAIYTATVAE 1631
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 61/134 (45%), Gaps = 30/134 (22%)
Query: 30 YSITQGND---NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQ-YSLVITATD 85
YS++ G D H NP T E L S DIDR+ + ++I A D
Sbjct: 593 YSLSDGFDKQATHPLFQINPHTGE------------LCVSQDIDRDTGQTVHDILIKAED 640
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G++ A+T+V +++ D NDN+PVFS + Y + SH + + I V AT
Sbjct: 641 PGGLS-AQTYVHIEIEDLNDNAPVFSPEEYAVSIS----------SHAQPGTEIVIVIAT 689
Query: 146 DADGDK---VAYKL 156
D D + V Y L
Sbjct: 690 DRDSGRFGQVTYDL 703
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 20/120 (16%)
Query: 66 SGDI------DREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
+GDI D E ++Y ++ A D KG A V V++ ++ SPVF+QK Y F++
Sbjct: 2737 TGDIHTRQTFDYERESEYCFIVEARD-KGDKAATVRVQVNIKGVDEFSPVFTQKQYHFLL 2795
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPSNLVVIVPQTGELLLTG 176
+ + K ++G V A D DG V Y L S I G + ++G
Sbjct: 2796 PE----------NIKPGDTVGYVMAMDHDGGVDGVVEYSLVNSSPFFSINRTIGAIFVSG 2845
>gi|328703041|ref|XP_003242077.1| PREDICTED: fat-like cadherin-related tumor suppressor homolog isoform
2 [Acyrthosiphon pisum]
Length = 4147
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 131/296 (44%), Gaps = 45/296 (15%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+EN SGT + + + + P+ V YSI + F + N T
Sbjct: 2579 LENQLSGTVI--IRVQAIDNDTGPYGEVSYSIPSKKMSKIFNINNITGE----------- 2625
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+++ +DREEV+ Y L + A D +G T V V V DENDNSP RF++
Sbjct: 2626 --IISRMPLDREEVSLYELNVLACD-QGARCGYTLVRVRVSDENDNSP-------RFLLP 2675
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKL--AVPSN---LVVIVPQTGELLL- 174
+ K+ ++S++ F ++ +V ++ Y + PS+ L+ + TG L+L
Sbjct: 2676 EYKTCIHSSLPVNTGFLTVKAVDDDQEPSGQITYSINDIEPSDITKLMTVNKYTGALVLL 2735
Query: 175 -TGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSP------VLQDEQLLQMIDR 227
T + ++V Y+ + A D SP R + P ++++ SP LQ++Q + +
Sbjct: 2736 KTVESLKNNV-YQFFIRATDNGSPPRQSDVPIELFVL--SPEDLPPVFLQEDQKFNLTE- 2791
Query: 228 KSEAPHRIEKRRVTRAVRPTKRIDFSETDGEM-----EGRIVFALEKETEREKFKI 278
S + ++ V +I SE ++ +G+I A + E++ F I
Sbjct: 2792 NSPIGTIVTTVKLVSQVETKYKITASEETAKLFTINDQGQITVAGLLDREKQAFHI 2847
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 21/120 (17%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
EN SGT VK L SS + + + +G+ FA+ NP+T GV
Sbjct: 1738 ENEPSGTVVKRLQARSTSS-------LLFELVEGDTYSLFAV-NPST-----------GV 1778
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
L VT +D E Y+L +TAT++ G +KA HV+V VLD NDNSP Y+ ++ +
Sbjct: 1779 L-VTRRPLDYESCHVYNLSVTATNMAG-SKAVCHVSVHVLDRNDNSPELVNTSYKGVISE 1836
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 21/140 (15%)
Query: 13 LPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE 72
+P+ + + +L+ YSI GN FA+ T + ++ LL ++D E
Sbjct: 2270 IPLTIRADSPLARKLI-YSIVAGNTFEEFAIDFNTADDYGGTS------LLYAVDNLDYE 2322
Query: 73 EVAQYSLVITATD-VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
+V Y+L + ATD V G++ AE V++ V D ND +P F Q Y N ++S
Sbjct: 2323 QVQHYTLTVRATDSVSGVS-AEVLVSIMVTDVNDCAPEFYQDSY-----------NISIS 2370
Query: 132 HWKKFSS-IGSVSATDADGD 150
F S I V+ATD D D
Sbjct: 2371 ESASFGSFILRVTATDNDTD 2390
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 25/170 (14%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITA----TDVKGINK 91
N++ F++ NP++H ST +G+L T DRE Y +++ D + +
Sbjct: 2071 NEHLLFSISNPSSHFQIGST---TGILSTTGIAFDREVKEIYQIIVQVQSMDADSESLRV 2127
Query: 92 AETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GD 150
A + V +LD NDN+P+F Y IV S+++ KK + V A D D G+
Sbjct: 2128 AHVPINVTILDINDNAPMFVNLPYYAIV-----SIDA-----KKDDLVTKVHAVDLDQGE 2177
Query: 151 KVAYKLAV---PSNLVVIVPQTGELLLTGDPPSDD----VEYELTVEAHD 193
A + + P L + TGE+ L + S + E++LTV A D
Sbjct: 2178 NAAVRYELTKGPGELFRVSRSTGEIFLRHNLESQNNGRISEFKLTVAAFD 2227
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 18/91 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V YSI GN+++ F++ S++GV+ V +D E V Y L I ATD+
Sbjct: 3328 VVYSIAGGNEHNKFSIN------------SETGVISVFEM-LDYERVRDYLLTIQATDLG 3374
Query: 88 G---INKAETHVTVDVLDENDNSPVFSQKVY 115
N+A ++T +LD NDN+P+F Q Y
Sbjct: 3375 EPPLSNQAMVNIT--ILDANDNAPIFGQLAY 3403
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 109/270 (40%), Gaps = 46/270 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+++S+ DNH S SG++ + + +DRE Y++ + A D
Sbjct: 3224 LKFSLQDSADNHFI-------------ISSDSGIVTL-AKKLDRETCETYNISVKAIDQG 3269
Query: 88 GINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATD 146
+ T + V VLD NDN P+F Q+ Y V ++ + +++ V+ V AT
Sbjct: 3270 SPPLSSLTQLHVIVLDVNDNPPIFVQRTYYATVSEI-APIDTEVTR---------VLATS 3319
Query: 147 ADGDK---VAYKLAVPS--NLVVIVPQTGELLLTGDPPSDDV-EYELTVEAHDLQSPSRY 200
D K V Y +A + N I +TG + + + V +Y LT++A DL P
Sbjct: 3320 LDSGKNAEVVYSIAGGNEHNKFSINSETGVISVFEMLDYERVRDYLLTIQATDLGEPPLS 3379
Query: 201 AREPAQVWL---QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDG 257
+ + + N+P+ ID + K T + D
Sbjct: 3380 NQAMVNITILDANDNAPIFGQLAYTTQIDEDVHVGEVVIKVSAT------------DLDS 3427
Query: 258 EMEGRIVFALEKETEREKFKIRDENPWITV 287
E+ G+I +AL K ++F I ITV
Sbjct: 3428 ELNGKIRYALVKGDHHQQFAIDSFTGNITV 3457
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 16/94 (17%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RY++ +G+ + FA+ + T + + + +DRE+V+ Y+L I ATD
Sbjct: 3433 IRYALVKGDHHQQFAIDSFTGN-------------ITVAKPLDREQVSTYNLQIRATD-S 3478
Query: 88 GINKAETH--VTVDVLDENDNSPVFSQKVYRFIV 119
G+ + + V V V D NDN P+FSQ Y V
Sbjct: 3479 GVPELMSFALVQVQVNDVNDNPPLFSQHNYSAFV 3512
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 15/92 (16%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+ Y IT GN FA+ + +G++ T +DRE +++ L +T D
Sbjct: 1202 ITYKITTGNPQSLFAIS------------ANTGLITTTGRKLDRETESEHILEVTVID-D 1248
Query: 88 GIN--KAETHVTVDVLDENDNSPVFSQKVYRF 117
G+ + T V + V D NDN+P +K YRF
Sbjct: 1249 GVPVLSSTTSVVIAVEDVNDNAPEMLKKAYRF 1280
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 38/182 (20%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQ 112
+ + +SGV+ V +DRE +A++ L + D +K V + V+D ND++P FS
Sbjct: 1566 AVDYQSGVVSVQQP-LDRESIARHELTVVVKDQSTPSKKNFARVVITVIDSNDHAPEFS- 1623
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKF------SSIGSVSATDAD-GDKVAYKLAVPS----N 161
SN+ + F +S+ + ATD D G+ A + S N
Sbjct: 1624 ---------------SNIVQGRVFETTAVGTSVLQLLATDKDHGENAAVSYQIISGNIGN 1668
Query: 162 LVVIVPQTGELLLTGD-PPSDDVEYELTVEAHDLQSPSRYAREPAQVWL--------QFN 212
+ I + G L L + S EY L V+A D SP Y+ P + + +FN
Sbjct: 1669 VFSIDSKLGTLHLMKELDMSVSSEYTLIVKAVDSGSPPLYSTIPVYIMVVMADNAPPKFN 1728
Query: 213 SP 214
+P
Sbjct: 1729 NP 1730
Score = 37.7 bits (86), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 113/283 (39%), Gaps = 67/283 (23%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAE----THVTVDVLDENDNSPVFSQKVYRF 117
LL T+ +DRE ++Y+L V+ K+E + V + +LD NDN+P+F
Sbjct: 3139 LLKTAVTLDRELQSRYNL---EAHVQDREKSEWECISKVEITMLDINDNAPLF------- 3188
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSV----SATDAD---GDKVAYKLA-VPSNLVVIVPQT 169
S N+N + + + IG++ ATDAD K+ + L N +I +
Sbjct: 3189 ------ISNNNNTASLSEDAQIGTIVIKMHATDADIGLNRKLKFSLQDSADNHFIISSDS 3242
Query: 170 GELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRK 228
G + L + E Y ++V+A D SP P+ QL ++
Sbjct: 3243 GIVTLAKKLDRETCETYNISVKAIDQGSP----------------PLSSLTQLHVIVLDV 3286
Query: 229 SEAPHRIEKRRVTRAVRPTKRIDFSET-------DGEMEGRIVFALEKETEREKFKIRDE 281
++ P +R V ID T D +V+++ E KF I E
Sbjct: 3287 NDNPPIFVQRTYYATVSEIAPIDTEVTRVLATSLDSGKNAEVVYSIAGGNEHNKFSINSE 3346
Query: 282 NPWITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATNGG 324
I+V FE L E+ D+ +TI QAT+ G
Sbjct: 3347 TGVISV-------------FEMLDYERVRDYLLTI--QATDLG 3374
>gi|119514197|gb|ABL75860.1| protocadherin 2A20 [Takifugu rubripes]
Length = 938
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 20/142 (14%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+LV +DRE +SLV+TA D K E ++ ++VLD NDN+PVFS+ VY ++
Sbjct: 194 ILVVQKSLDRETAGSHSLVLTALDGGKPPKSGEMNILINVLDINDNAPVFSKDVYSVMLH 253
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSN-----LVVIVPQTGEL 172
+ N+ + +++ V+ATDAD +V Y + N L I TGE+
Sbjct: 254 E-----NTLIG-----TTVIQVNATDADDGPNGEVVYSFSNSMNQNVLDLFDINEITGEI 303
Query: 173 LLTGDPPSDDVE-YELTVEAHD 193
+ G ++ E YE+ VEA D
Sbjct: 304 TVKGPIDYEENERYEIEVEASD 325
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +D+E+ +Y L ITA D + +E +TV V D NDN P FS Y F + +
Sbjct: 409 LVTKSALDKEQTDKYDLTITAKDAGQPSLSSEKTITVVVSDVNDNRPEFSLSPYTFYISE 468
>gi|12621132|ref|NP_075243.1| protocadherin Fat 2 precursor [Rattus norvegicus]
gi|22095688|sp|O88277.1|FAT2_RAT RecName: Full=Protocadherin Fat 2; AltName: Full=Multiple epidermal
growth factor-like domains protein 1; Short=Multiple
EGF-like domains protein 1; Flags: Precursor
gi|3449286|dbj|BAA32458.1| MEGF1 [Rattus norvegicus]
Length = 4351
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 81/184 (44%), Gaps = 29/184 (15%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHE---IRNSTESK 58
ENS T V+ P+ + PH +V+Y I G+ F + +R T+S
Sbjct: 44 ENSAPKTYVES-PVKMGMYLAEPHWVVKYRIISGDAAGVFKTEEHVVGNFCFLRIRTKSS 102
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118
+ LL +RE Y+L++ A+D +A T V V +LD+ND P+FS YR
Sbjct: 103 NTALL------NREVRDSYTLIVQASDKSLEFEALTQVVVHILDQNDLKPLFSPPSYRVT 156
Query: 119 VGD---LKSSLNSNVSHWKKFSSIGSVSATDADGDKVA---YKLAVPSNLVVIVPQTGEL 172
+ + LK S I V+ATDAD + A Y S + I P +G +
Sbjct: 157 ISEDRPLK-------------SPICKVTATDADLGQNAEFYYAFNARSEVFAIHPTSGVV 203
Query: 173 LLTG 176
+ G
Sbjct: 204 TVAG 207
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 29/223 (13%)
Query: 12 GLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDR 71
G PIL+ S+ V Y + +GN + F++ S SG L+ T +D
Sbjct: 1676 GSPILLLSAGSSSE--VTYELREGNKDSVFSMN------------SYSG-LISTQKRLDH 1720
Query: 72 EEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVS 131
E+V Y L I +++ G+ E V ++DENDN P F + + +G + + +
Sbjct: 1721 EKVPSYRLRIRGSNMAGV-FTEVVALVYIIDENDNPPAFGKPTF---LGHISEAAPLHSL 1776
Query: 132 HWKKFSSIGSVSATDADGDK---VAYKLAVPSNL--VVIVPQTGELLLTGDPPSDDVE-Y 185
+ +S V A+D+D + + YK+ P L I P G L T + +D +
Sbjct: 1777 ILGEDNSPLVVRASDSDREANSLLVYKILEPEALKFFKIDPSMGTLTTTSELDFEDTPLF 1836
Query: 186 ELTVEAHDLQSPSRYAREPAQVWLQF----NSPVLQDEQLLQM 224
+ + HD +P +A A+V + +SP EQ+ ++
Sbjct: 1837 QFNIYVHDQGTPILFAPRSAKVIIHVRDVNDSPPRFSEQIYEV 1879
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 22/171 (12%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
H + Y I+ GN+ F + E ++G+L+V + +D E + Y L +T
Sbjct: 747 HGKLVYVISDGNEEGCFDI------------ELETGLLMVAAA-LDYETTSFYVLNVTVY 793
Query: 85 DVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D+ K+ +TV V D NDN P RF G + +++ + + + +
Sbjct: 794 DLGTPPKSSWKLLTVTVKDWNDNPP-------RFPPGGYQLTISEDTEVGTTIAELKTED 846
Query: 144 ATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSD-DVEYELTVEAHD 193
A D +V Y L P+ + P TGEL++TG + + +Y L EA D
Sbjct: 847 ADSEDNRRVRYTLLTPTEKFSLHPFTGELVVTGHLDRESESQYILKAEARD 897
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 90/199 (45%), Gaps = 31/199 (15%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+EN++ G V L L A Q+ Y IT+G+ F++ E R S+
Sbjct: 2918 VENNEPGELVATLKTLDADVSDQNRQVTCY-ITEGDPLGQFSISQ-VGDEWRISSRKT-- 2973
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
+DRE +A+Y L +TA+D G +A V V V+D NDNSP SQ +Y G
Sbjct: 2974 --------LDREHIAKYLLRVTASD--GKFQASVPVEVFVVDINDNSPQCSQLLY---TG 3020
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-SNLVVIVPQTGEL--LL 174
++ + H+ I VSA D D D ++ Y L P + + P TGEL L
Sbjct: 3021 KVREDVTPG--HF-----ILKVSAIDVDMDTNAQITYSLHGPGAQEFKLDPHTGELTTLT 3073
Query: 175 TGDPPSDDVEYELTVEAHD 193
D DV Y L +A D
Sbjct: 3074 VLDRERKDV-YNLVAKATD 3091
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 88/186 (47%), Gaps = 41/186 (22%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
+RYS+ + N F L +++G L+ T+ +D E QY L + +
Sbjct: 393 LRYSLKPSSRNTAFKLN------------ARTG-LITTTKLVDFHEQNQYQLHVKTS--- 436
Query: 88 GINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDA 147
+ +A T V +D++D N+++PVF++ Y + +L+ N+ +S+ +V+ATD
Sbjct: 437 -LGQATTTVIIDIVDCNNHAPVFNRSSY-------EGTLDENI---PPGTSVLTVTATDQ 485
Query: 148 D-GDK--VAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELT-------VEAHDLQSP 197
D GD + Y +A P VP + + LL + ++YEL V A D SP
Sbjct: 486 DHGDNGHITYSIAGPK----AVPFSIDPLLGVISTTKPMDYELMKRIYTFRVRASDWGSP 541
Query: 198 SRYARE 203
R +E
Sbjct: 542 FRQEKE 547
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQK 113
+T+ K+GVL VT G +D E ++ + ATD + +E V V V D NDN P FSQ
Sbjct: 2217 TTDFKTGVLTVT-GPLDYESKNKHVFTVRATDTALGSFSEATVEVLVEDINDNPPTFSQL 2275
Query: 114 VY 115
VY
Sbjct: 2276 VY 2277
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 18/89 (20%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQK------- 113
LL T+ +DRE +Y L +T D + ++ + V V +LD NDN P+FS K
Sbjct: 1193 LLTTAKQLDRENKDEYVLEVTVQDNGDPSLRSTSRVVVCILDVNDNPPMFSHKLFNVRLS 1252
Query: 114 ----------VYRFIVGDLKSSLNSNVSH 132
VYR + D LN +V++
Sbjct: 1253 ERLSPLSPEPVYRLVASDPDEGLNGSVTY 1281
>gi|297295319|ref|XP_001092936.2| PREDICTED: protocadherin Fat 4-like [Macaca mulatta]
Length = 1704
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 62/127 (48%), Gaps = 20/127 (15%)
Query: 34 QGNDNHTFALKNPTTHEIRNSTESKSGVL---LVTSGDIDREEVAQYSLVITATDVKGIN 90
Q N NH F+L T +GV+ LV +DREE A + LV+TA+D
Sbjct: 171 QLNPNHHFSLDVQT---------GDNGVINPELVLQRALDREEEAAHHLVLTASDGGEPR 221
Query: 91 KAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
++ T + V VLD NDN+PVF+Q +YR V + NV + ++ + +
Sbjct: 222 RSSTVRIRVTVLDTNDNAPVFAQPIYRVKVLE-------NVPPGTRLLTVTASDPDEGIN 274
Query: 150 DKVAYKL 156
KVAYK
Sbjct: 275 GKVAYKF 281
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQK 113
+ SK+ LVT G +DRE+ +Y++ ITATD K + V + + D NDN+PVF Q
Sbjct: 1260 SSSKNSYKLVTDGTLDREQTPEYNITITATDRGKPPLSSSISVILHISDVNDNAPVFHQA 1319
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD 148
Y L S + +SI V A+D D
Sbjct: 1320 SY----------LVSVAENNPPGASIAQVCASDPD 1344
Score = 44.7 bits (104), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 26/154 (16%)
Query: 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSG 60
+ENS GT + L + S K+ Q+V Y+ DN F L+ + R
Sbjct: 357 LENSLPGTVIAFLSVHDQDSGKN-GQVVCYT----RDNLPFKLEESIDNYYR-------- 403
Query: 61 VLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIV 119
LVT +DRE V+ Y++ + A+D+ ETH+ + V D NDN P F + Y +
Sbjct: 404 --LVTRKYLDRENVSIYNITVMASDLGTPPLSTETHIALHVADINDNPPTFPRASYSAYI 461
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA 153
L +N+ + +SI S++A D D + A
Sbjct: 462 ------LENNL----RGASIFSLTAHDPDSQENA 485
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 28/169 (16%)
Query: 69 IDREEVAQYSLVITATD-----VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLK 123
+DRE+ + + LV+TA D + G T + + V D NDN PVF++ VYR
Sbjct: 1068 LDREQQSYHRLVLTALDGGDPPLSGT----TELRIQVTDANDNPPVFNRDVYRV------ 1117
Query: 124 SSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPS 180
SL NV + + VSATD D ++ Y + + ++GE++
Sbjct: 1118 -SLRENVPPG---TIVLQVSATDQDEGINSEITYSFYRTGQIFGLNSKSGEIITQKKLDF 1173
Query: 181 DDV-EYELTVEAHDLQSPSRYAREPAQVWLQ---FNSPVLQDEQLLQMI 225
++ EY + VE D A+ ++ +Q NSP + LL+MI
Sbjct: 1174 EETKEYSMIVEGRD--GGGLVAQCTVEINIQDENDNSPEVTFHSLLEMI 1220
>gi|402872797|ref|XP_003900288.1| PREDICTED: protocadherin beta-2 [Papio anubis]
Length = 798
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV S +DRE ++Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 405 LVISTALDRETRSEYNITITVTDLGTPRLKIEHNITVLVSDVNDNAPAFTQTSYTLFVRE 464
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLAVP-------SNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L P ++LV I G
Sbjct: 465 ----NNSPALH------IGSVSATDRDSGTNAQVTYSLLPPQDPHLPLASLVSINADNGH 514
Query: 172 LLLTGDPPSDDVE-YELTVEAHDLQSPS 198
L + ++ +E V A D SP+
Sbjct: 515 LFALRSLDYEALQAFEFRVGATDRGSPA 542
>gi|344281748|ref|XP_003412639.1| PREDICTED: protocadherin-9 isoform 2 [Loxodonta africana]
Length = 1203
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 15/104 (14%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVY 115
K+GVL S DREE ++ +TA D G +++ V V VLDENDNSP F+ +
Sbjct: 520 KTGVL-TASRVFDREEQERFIFTVTARD-NGTPPLQSQAAVIVTVLDENDNSPKFTHNHF 577
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAV 158
+F V + + K+S++G ++ TDAD GD A L++
Sbjct: 578 QFFVSE----------NLPKYSTVGVITVTDADAGDNKAVTLSI 611
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 87/208 (41%), Gaps = 36/208 (17%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET- 94
NDN F L + SGV+ ++ DRE+ + Y+ + ATD ++ T
Sbjct: 613 NDNENFVL------------DPYSGVI-KSNVSFDREQQSSYTFDVKATDGGQPPRSSTA 659
Query: 95 HVTVDVLDENDNSPVF----SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-- 148
VT++V+D NDNSPV S ++ + S++ +V + V A D D
Sbjct: 660 KVTINVMDVNDNSPVVISPPSNTSFKLVP---LSAIPGSV--------VAEVFAVDIDTG 708
Query: 149 -GDKVAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREP 204
++ Y + +N L I P TG + L P S DV + L V DL P +
Sbjct: 709 MNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPASTDVGLHRLVVNISDLGYP-KSLHTL 767
Query: 205 AQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
V+L N + +I R E P
Sbjct: 768 VLVFLYVNDTAGNASYIYDLIRRTMETP 795
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 19/143 (13%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
LL TS +D E ++S I A+D + +T V V + DENDN P+F+Q V V
Sbjct: 420 LLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVA 479
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLLTGD 177
+ + ++ + ++SATD D K + Y+L ++ + +TG +LT
Sbjct: 480 E----------NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTG--VLTAS 527
Query: 178 PPSDDVEYE---LTVEAHDLQSP 197
D E E TV A D +P
Sbjct: 528 RVFDREEQERFIFTVTARDNGTP 550
>gi|344238298|gb|EGV94401.1| Protocadherin beta-17 [Cricetulus griseus]
Length = 642
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 58/119 (48%), Gaps = 21/119 (17%)
Query: 37 DNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH- 95
DN F LK PT K+ LVT +DRE A+Y++ IT TD+ H
Sbjct: 235 DNLPFLLK-PTF---------KNFYTLVTESSLDRESRAEYNITITVTDLGTPRLTTQHT 284
Query: 96 VTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAY 154
+TV V D NDN+P F+Q Y V + NS H IG++SATD+D A+
Sbjct: 285 ITVQVSDVNDNAPAFTQTSYTLFVQE----NNSPALH------IGTISATDSDSGSNAH 333
>gi|296485270|tpg|DAA27385.1| TPA: protocadherin gamma subfamily B, 5-like [Bos taurus]
Length = 815
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 61/107 (57%), Gaps = 16/107 (14%)
Query: 55 TESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH--VTVDVLDENDNSPVFSQ 112
+ SK+ LVT+G +DRE++ +Y++ I ATD KG TH VT+ V+D NDN P FSQ
Sbjct: 392 SSSKNSYKLVTAGTLDREQIPEYNVTIVATD-KGKPPLCTHTSVTLHVVDINDNPPSFSQ 450
Query: 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKL 156
Y + + +N+ + +SI SV+A D D + +V Y L
Sbjct: 451 TSYSVYLPE------NNL----RGTSIFSVTAHDPDSNENARVIYSL 487
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 23/140 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATD-----VKGINKAETHVTVDVLDENDNSPVFSQKVYRF 117
LV +DRE+ + + LV+TA+D + G + + VT D NDN PVF+Q VYR
Sbjct: 194 LVLEKPLDREQQSYHRLVLTASDGGDPPLSGTTELQIQVT----DANDNPPVFTQDVYRV 249
Query: 118 IVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLL 174
+G+ NV +++ VSATD D ++AY + + ++GE+
Sbjct: 250 NLGE-------NVPPG---TTVLQVSATDQDEGINSEIAYSFYRSGQVFGLNSKSGEITT 299
Query: 175 TGDPPSDDV-EYELTVEAHD 193
+++ EY + VE D
Sbjct: 300 LKTLDFEEIKEYSIVVEGRD 319
>gi|149017329|gb|EDL76380.1| rCG49295, isoform CRA_p [Rattus norvegicus]
Length = 872
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 65/126 (51%), Gaps = 23/126 (18%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT+ ++DRE+++ Y++ + ATD GI ETH+++ V D NDN P FS Y V
Sbjct: 406 LVTAQNLDREKMSMYNITLKATD-GGIPPLSTETHMSIHVSDTNDNPPTFSDSSYSIYVP 464
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLA------VP-SNLVVIVPQTG 170
+ + + +SI SV+A D D DK + Y LA VP S+ + I TG
Sbjct: 465 E----------NNPRGASIFSVTAQDPDSDKNAQITYALAEDSIQGVPVSSYISINSDTG 514
Query: 171 ELLLTG 176
L G
Sbjct: 515 VLYALG 520
Score = 37.7 bits (86), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 22/175 (12%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ L RY ++ NH F+L ++N + LV +DREE + LV+TA
Sbjct: 167 NSLQRYQLSP---NHHFSLV------VQNGDDGTKYPELVLEKALDREEEGLHHLVLTAY 217
Query: 85 DVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D + + V V+D ND++PVFS Y ++++ NV + ++ ++
Sbjct: 218 DGGDPLRSGTASIHVTVVDVNDHTPVFSLPRY-------QATVPENVPVGTRLLTVNAID 270
Query: 144 ATDADGDKVAYKL--AVPSNLVV--IVPQTGEL-LLTGDPPSDDVEYELTVEAHD 193
+ +V Y P L + + TGEL L G + YEL V+A D
Sbjct: 271 LDEGIYGEVTYSFWKITPELLQMFHLSSLTGELSTLKGLDYEESSFYELEVQAQD 325
>gi|348530126|ref|XP_003452562.1| PREDICTED: cadherin-2-like [Oreochromis niloticus]
Length = 961
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 100/210 (47%), Gaps = 39/210 (18%)
Query: 2 ENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGV 61
E SK G+ V + + K + ++RY I N ++P+++ + +K+G
Sbjct: 334 EGSKPGSFVMTVTAVDKDDPKTANGMLRYKILSQNP------QSPSSNMF--TINNKTGD 385
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKG------INKAETHVTVDVLDENDNSPVFSQKVY 115
++ + +DRE+V QY+L+I ATD++G N A T + + D NDN+P F+ + +
Sbjct: 386 IITVAAGLDREKVTQYTLIIQATDMEGNPTYGLSNTATT--VIRITDVNDNAPEFTTETF 443
Query: 116 ---------RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPSNLVVIV 166
IV +L + + + H +S++ + A D G + ++P++
Sbjct: 444 FGEVHENRVNVIVANLTVT-DKDQPHTPAWSAVYRIIAGDPTG-----RFSIPTD----- 492
Query: 167 PQTGELLLTGDPPSD---DVEYELTVEAHD 193
P T E LLT P D + LTVEA +
Sbjct: 493 PTTNEGLLTVVKPIDYESTRAFMLTVEAEN 522
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 37/198 (18%)
Query: 20 SHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSL 79
S + ++++RYS+T A + PT I N SG L VT +DRE ++ + L
Sbjct: 241 SDRDKNRMLRYSVTGPG-----ADQPPTGIFIINPI---SGQLSVTK-PLDREHISNFHL 291
Query: 80 VITATDVKGINKAET--HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFS 137
A D+ G N+ E + ++V+D+NDN P F+ ++ N +V K
Sbjct: 292 RAHAVDLNG-NQVENPIDIVINVIDQNDNRPEFTHSIF-----------NGSVPEGSKPG 339
Query: 138 S-IGSVSATDADGDKVA-----YKL------AVPSNLVVIVPQTGELL--LTGDPPSDDV 183
S + +V+A D D K A YK+ + SN+ I +TG+++ G
Sbjct: 340 SFVMTVTAVDKDDPKTANGMLRYKILSQNPQSPSSNMFTINNKTGDIITVAAGLDREKVT 399
Query: 184 EYELTVEAHDLQSPSRYA 201
+Y L ++A D++ Y
Sbjct: 400 QYTLIIQATDMEGNPTYG 417
>gi|297477318|ref|XP_002689275.1| PREDICTED: protocadherin beta-5 [Bos taurus]
gi|296485245|tpg|DAA27360.1| TPA: protocadherin beta 5 [Bos taurus]
Length = 796
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 70/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DREE A Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 402 LVTERSLDREERAGYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPTFTQTSYTLWVRE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYK-------LAVPSNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L ++LV I P G
Sbjct: 462 ----NNSPALH------IGSVSATDTDAGANAQVTYSLLPPPDPLVPLASLVSINPDNGH 511
Query: 172 LL-LTGDPPSDDVEYELTVEAHDLQSPS 198
L LT +E V A D SP+
Sbjct: 512 LFALTSLDYEALRAFEFHVGATDRGSPA 539
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE+ + SL +TA D ++ T V ++V+D NDN+P F Q VY + +
Sbjct: 194 LVLDKALDREKQPELSLTLTALDGGAPPRSGTTTVRIEVVDINDNAPEFLQSVYEVQIPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
S LNS V +VSA D D KVAY L
Sbjct: 254 -NSPLNSLVV---------AVSARDLDAGTYGKVAYAL 281
>gi|297295315|ref|XP_001088343.2| PREDICTED: protein dachsous-like [Macaca mulatta]
Length = 1635
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 16/100 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT+ +DREEV+ Y++ +TATD KG ET ++++V D NDN P F Y V
Sbjct: 1180 LVTNAALDREEVSLYNITVTATD-KGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYV- 1237
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA 157
L +N + +SI SV+A D D D +V+Y LA
Sbjct: 1238 -----LENN----PRGASIFSVNALDPDMDQNARVSYSLA 1268
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 59/105 (56%), Gaps = 17/105 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG---INKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
L+T G +DRE++ +Y++ ITATD KG ++ ++T +T+ +LD NDN PVF Q Y V
Sbjct: 404 LLTDGALDREQIPEYNVTITATD-KGNPPLSSSKT-ITLHILDVNDNVPVFHQASYTVHV 461
Query: 120 GDLKSSLNSNVSHWKKFSSIGSVSATDAD--GDKVAYKLAVPSNL 162
+ + +SI VSA+D D + + Y V S+L
Sbjct: 462 AE----------NNPPGASIAHVSASDPDLGPNGLVYYYIVASDL 496
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV G +DRE A Y LV+TA D + + + V V+D NDN+PVF+Q VYR V +
Sbjct: 970 LVLEGTLDREGEAVYHLVLTALDGGDPVRSSVARILVTVVDVNDNAPVFTQPVYRVSVPE 1029
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD----GDKVAYKLAVP---SNLVVIVPQTGELLL 174
+ + + +V+ATD D G+ Y + + S + + TGE+
Sbjct: 1030 ----------NLPVGTPVLAVNATDQDEGVHGEVTYYFVKITEKISQIFCLNVLTGEIST 1079
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+ + ++ YEL VEA D
Sbjct: 1080 SANLDYEESRFYELGVEARD 1099
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVY 115
LV +DRE+ + L++TA D + TH+ V VLD NDN+P+F+ Y
Sbjct: 194 LVLEQPLDREKETVHDLLLTALDGGDPVLSGTTHIRVTVLDANDNAPLFAPSEY 247
>gi|345328660|ref|XP_001507967.2| PREDICTED: protocadherin gamma-A10 [Ornithorhynchus anatinus]
Length = 812
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 16/99 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT G +DRE V+ Y++ +TATD +G A TH+++ VLD NDN PVF Q+ Y V
Sbjct: 404 LVTDGVLDRELVSDYNVTVTATD-RGSPPLSAHTHISLQVLDTNDNPPVFKQRDYSVYVS 462
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKL 156
+ + + +SI V+A D D + +V Y +
Sbjct: 463 E----------NNPRGASIFRVAAQDPDSEENARVTYSI 491
Score = 44.3 bits (103), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIV 119
LV +DREE A + LV+TA D + V V VLD NDN+PVF+Q VY+ V
Sbjct: 194 LVLERVLDREEEAVHHLVLTALDGGDPVRSGTARVRVTVLDTNDNAPVFTQSVYQVKV 251
>gi|344281746|ref|XP_003412638.1| PREDICTED: protocadherin-9 isoform 1 [Loxodonta africana]
Length = 1237
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 57/104 (54%), Gaps = 15/104 (14%)
Query: 58 KSGVLLVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVY 115
K+GVL S DREE ++ +TA D G +++ V V VLDENDNSP F+ +
Sbjct: 520 KTGVL-TASRVFDREEQERFIFTVTARD-NGTPPLQSQAAVIVTVLDENDNSPKFTHNHF 577
Query: 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-GDKVAYKLAV 158
+F V + + K+S++G ++ TDAD GD A L++
Sbjct: 578 QFFVSE----------NLPKYSTVGVITVTDADAGDNKAVTLSI 611
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 87/208 (41%), Gaps = 36/208 (17%)
Query: 36 NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAET- 94
NDN F L + SGV+ ++ DRE+ + Y+ + ATD ++ T
Sbjct: 613 NDNENFVL------------DPYSGVI-KSNVSFDREQQSSYTFDVKATDGGQPPRSSTA 659
Query: 95 HVTVDVLDENDNSPVF----SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD-- 148
VT++V+D NDNSPV S ++ + S++ +V + V A D D
Sbjct: 660 KVTINVMDVNDNSPVVISPPSNTSFKLVP---LSAIPGSV--------VAEVFAVDIDTG 708
Query: 149 -GDKVAYKLAVPSN--LVVIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYAREP 204
++ Y + +N L I P TG + L P S DV + L V DL P +
Sbjct: 709 MNAELKYTIVSGNNKGLFRIDPVTGNITLEEKPASTDVGLHRLVVNISDLGYP-KSLHTL 767
Query: 205 AQVWLQFNSPVLQDEQLLQMIDRKSEAP 232
V+L N + +I R E P
Sbjct: 768 VLVFLYVNDTAGNASYIYDLIRRTMETP 795
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 19/143 (13%)
Query: 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG 120
LL TS +D E ++S I A+D + +T V V + DENDN P+F+Q V V
Sbjct: 420 LLETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVA 479
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLAVPSNLVVIVPQTGELLLTGD 177
+ + ++ + ++SATD D K + Y+L ++ + +TG +LT
Sbjct: 480 E----------NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTG--VLTAS 527
Query: 178 PPSDDVEYE---LTVEAHDLQSP 197
D E E TV A D +P
Sbjct: 528 RVFDREEQERFIFTVTARDNGTP 550
>gi|426229723|ref|XP_004008936.1| PREDICTED: protocadherin beta-4 isoform 2 [Ovis aries]
Length = 797
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 107/253 (42%), Gaps = 45/253 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DRE A+Y++ IT TD K E ++TV V D NDN+P F+Q Y V +
Sbjct: 403 LVTDSPLDRESQAEYNITITVTDTGTPRLKTEHNITVLVSDVNDNAPAFTQTSYTLWVRE 462
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYK-------LAVPSNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L ++LV I P G
Sbjct: 463 ----NNSPALH------IGSVSATDTDAGANAQVTYSLLPPPDPLLPLASLVSINPDNGH 512
Query: 172 LL-LTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWL---QFNSPVLQDEQLLQMIDR 227
L LT +E V A D SP+ ++ +V + N+P + L + +
Sbjct: 513 LFALTSLDYEALRAFEFRVGATDRGSPALSSQALVRVLVADANDNAPFV----LYPLQNA 568
Query: 228 KSEAPHRIEKRRVTRAVRP---TKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPW 284
+ P + V RA P ++ + D + + L K TE F + W
Sbjct: 569 SAPCP-----QLVPRAAEPGYLVTKVVAVDGDAGQNAWLSYQLLKATEPGLFGV-----W 618
Query: 285 ITVDENGDVRVKK 297
NG+VR +
Sbjct: 619 A---HNGEVRTAR 628
Score = 40.8 bits (94), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 79/177 (44%), Gaps = 31/177 (17%)
Query: 28 VRYSITQGND--NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD 85
V YS+ Q ++ TF++ N T EIR + + +D E++ Y + I ATD
Sbjct: 277 VSYSLFQASEEIKQTFSI-NEVTGEIRLTKK------------LDFEQIKSYQVEIEATD 323
Query: 86 VKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
G++ T V ++V+D NDN+P + L SS+ N + SI +
Sbjct: 324 GGGLSGKGT-VVIEVVDVNDNAP-------ELTISSLISSIPENAP--ETVVSIFRIRDR 373
Query: 146 DADGDKVAYKLAVPSNLVVIVPQTGE--LLLTGDPPSD---DVEYELTVEAHDLQSP 197
D+ GD ++P NL I+ T + L D P D EY +T+ D +P
Sbjct: 374 DS-GDNGKMICSIPDNLPFILRPTFKNFYTLVTDSPLDRESQAEYNITITVTDTGTP 429
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 27 LVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDV 86
L +Y+I + H RN ++ K LV +DREE +++SL +TA D
Sbjct: 167 LQKYTINANSHFHVLT---------RNHSDGKKHPDLVQDKVLDREEQSEFSLTLTALDG 217
Query: 87 KGINKAET-HVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT 145
++ T V + ++D NDN+P F Y V + S LN S I +V A
Sbjct: 218 GSPPRSGTSMVRILIMDVNDNAPEFVHTPYEVQVLE-NSPLN---------SLILTVLAR 267
Query: 146 DADGDK---VAYKLAVPSNLV----VIVPQTGELLLTGDPPSDDVE-YELTVEAHD 193
D D V+Y L S + I TGE+ LT + ++ Y++ +EA D
Sbjct: 268 DVDAGNFGTVSYSLFQASEEIKQTFSINEVTGEIRLTKKLDFEQIKSYQVEIEATD 323
>gi|403255713|ref|XP_003920556.1| PREDICTED: protocadherin alpha-13 [Saimiri boliviensis boliviensis]
Length = 950
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 28/167 (16%)
Query: 38 NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-VKGINKAETHV 96
N FAL + +NS E S + LV +DREE+ ++SL++TA+D K +
Sbjct: 175 NDYFAL------DTQNSREQMSSLSLVLRKTLDREEIQEHSLLLTASDGGKPELTGTVQL 228
Query: 97 TVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD----GDKV 152
+ +LD NDN+P F Q VY+ V L+++ N + + ++ATD D GD +
Sbjct: 229 LITILDVNDNAPEFYQSVYKVTV--LENAFNRTL--------VIKLNATDPDEGTNGD-I 277
Query: 153 AYKLAVPSNLVVIV-----PQTGELLLTGDPPSDDVE-YELTVEAHD 193
Y P + V+ P GE+ G ++ + YE++VEA D
Sbjct: 278 VYSFRRPVSPAVLYAFTINPNNGEIRTKGKLDFEEKKLYEISVEAVD 324
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 88/205 (42%), Gaps = 36/205 (17%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINK-AETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE VA Y LV+TA D + A +V+V+V D NDN P F Q Y V +
Sbjct: 407 LVLDSALDRETVAAYELVVTARDGGSPSLWATANVSVEVADVNDNVPTFVQPEYTVFVKE 466
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGDK---VAYKLA-------VPSNLVVIVPQTGE 171
+N + F +VSA DAD + V+Y L S+ V + ++G+
Sbjct: 467 ------NNPPGYHIF----TVSAQDADAQENALVSYSLVERRVGDRALSSYVSVHAESGK 516
Query: 172 LLLTGDPPSDDVEYELT---VEAHDLQSPSRYAREPAQVWL---QFNSPVL-------QD 218
+ P D E EL V A D P + QV++ N+P L
Sbjct: 517 VYALQ--PLDHEELELLQFQVSARDAGVPPLSSNVTLQVFVLDENDNAPALLTPRAGSAG 574
Query: 219 EQLLQMIDRKSEAPHRIEKRRVTRA 243
+ +++ R + A H + K R A
Sbjct: 575 STVSELVPRSAGAGHVVAKVRAVDA 599
>gi|348503283|ref|XP_003439194.1| PREDICTED: cadherin-18-like [Oreochromis niloticus]
Length = 768
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 57/109 (52%), Gaps = 16/109 (14%)
Query: 54 STESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN---KAETHVTVDVLDENDNSPVF 110
S E K+G+++ + ++DRE QY +V+ D+ G++ + T VTV + D NDN P F
Sbjct: 179 SVEPKTGIIVTSWQNMDREAREQYQVVVQVKDMLGLSGGYSSSTTVTVSLTDVNDNGPTF 238
Query: 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKL 156
Q +Y F V + N+ + ++IG + A D D K+ Y L
Sbjct: 239 QQHLYTFAVPE-----NAAIG-----TTIGRIMAEDGDTGINAKMTYSL 277
>gi|301753507|ref|XP_002912640.1| PREDICTED: protocadherin gamma-B3-like [Ailuropoda melanoleuca]
Length = 820
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 81/159 (50%), Gaps = 24/159 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDV-KGINKAETHVTVDVLDENDNSPVFSQKV 114
++K+ +LVT G +DRE++ +Y++ IT TD K + V ++++D NDN+PVF Q
Sbjct: 397 DTKNTYMLVTDGVLDREQIPEYNITITVTDRGKPPLSSNRSVLLNIIDVNDNAPVFGQAF 456
Query: 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNL--------V 163
Y V + + +SI VSA+D D +V+Y + V S+L V
Sbjct: 457 YLVHVAE----------NNPPGASIAQVSASDPDLGPNGRVSYSI-VASDLEPRALASYV 505
Query: 164 VIVPQTGELLLTGDPPSDDVE-YELTVEAHDLQSPSRYA 201
+ Q+G + + + +ELT++A D SP+ A
Sbjct: 506 SVSAQSGVVFAQRAFDHEQLRAFELTLQARDQGSPALSA 544
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 70/140 (50%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKAE-THVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DREE + + LV+TA D +++ T + V V D NDN PVF+Q VY
Sbjct: 194 LVVKTPLDREEQSCHHLVLTAVDGGDPSRSSSTQIRVLVADANDNPPVFTQDVY------ 247
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDAD---GDKVAYKLAVPSNLV----VIVPQTGELLL 174
K+S+ N+ SS+ SV ATD D ++ Y N+V + +TG L
Sbjct: 248 -KASVRENLPMG---SSVLSVMATDLDEGVNAEITYAFINTGNVVKQLFKLDSKTGVLTT 303
Query: 175 TGDPPSDDVE-YELTVEAHD 193
G+ ++ E Y + VEA D
Sbjct: 304 GGELDFEERESYTIGVEAKD 323
>gi|291387508|ref|XP_002710180.1| PREDICTED: protocadherin gamma subfamily A, 6 [Oryctolagus
cuniculus]
Length = 822
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 71/140 (50%), Gaps = 19/140 (13%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKG-INKAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE A + LV+TATD + + V VLD NDN+PVF+Q VYR
Sbjct: 194 LVLERALDREGEAVHRLVLTATDGGDPVRSGVARILVTVLDANDNAPVFTQSVYR----- 248
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA----VPSNLVVIVPQTGELLL 174
+S+ N+ S + SV+ATD D +V+Y A S L + TGE+
Sbjct: 249 --ASVPENLPVG---SPVLSVNATDRDEGAHAQVSYSFAKITEKISRLFRLDALTGEIST 303
Query: 175 TGDPPSDDVE-YELTVEAHD 193
+ + +DV YEL VEA D
Sbjct: 304 SANLDYEDVSFYELDVEARD 323
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 16/100 (16%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKVYRFIVG 120
LVT+ +DRE+V+ Y++ +TATD KG ET +++ V D NDN P F Q Y +
Sbjct: 404 LVTNAVLDREQVSLYNITVTATD-KGAPPLSTETLISLKVADTNDNPPTFPQSSYSVYLP 462
Query: 121 DLKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYKLA 157
+ + + +SI SV+A D D + +VAY LA
Sbjct: 463 E----------NNPRGASIFSVNAFDPDSEENARVAYSLA 492
>gi|119895604|ref|XP_001253365.1| PREDICTED: protocadherin beta-5 [Bos taurus]
Length = 796
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 70/148 (47%), Gaps = 22/148 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LVT +DREE A Y++ IT TD+ K E ++TV V D NDN+P F+Q Y V +
Sbjct: 402 LVTERSLDREERAGYNITITVTDMGTPRLKTEHNITVLVSDVNDNAPTFTQTSYTLWVRE 461
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADGD---KVAYK-------LAVPSNLVVIVPQTGE 171
NS H IGSVSATD D +V Y L ++LV I P G
Sbjct: 462 ----NNSPALH------IGSVSATDTDAGANAQVTYSLLPPPDPLVPLASLVSINPDNGH 511
Query: 172 LL-LTGDPPSDDVEYELTVEAHDLQSPS 198
L LT +E V A D SP+
Sbjct: 512 LFALTSLDYEALRAFEFHVGATDRGSPA 539
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 14/98 (14%)
Query: 63 LVTSGDIDREEVAQYSLVITATDVKGINKA-ETHVTVDVLDENDNSPVFSQKVYRFIVGD 121
LV +DRE+ + SL +TA D ++ T V ++V+D NDN+P F Q VY + +
Sbjct: 194 LVLDKALDREKQPELSLTLTALDGGAPPRSGTTTVRIEVVDINDNAPEFLQSVYEVQIPE 253
Query: 122 LKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKL 156
S LNS V +VSA D D KVAY L
Sbjct: 254 -NSPLNSLVV---------AVSARDLDAGTYGKVAYAL 281
>gi|449504736|ref|XP_004176434.1| PREDICTED: LOW QUALITY PROTEIN: cadherin-23 [Taeniopygia guttata]
Length = 3375
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 25/136 (18%)
Query: 25 HQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITAT 84
+ ++ Y IT+GN++ TF + T G + DRE + YSLV+T
Sbjct: 1571 NSVLSYYITRGNEDLTFRMDRVT------------GEIATRPSPPDRERQSFYSLVVTVE 1618
Query: 85 DVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVS 143
D + A T V V +LDENDN+P F Q++Y + + S+LN +S+ +V
Sbjct: 1619 DEGNPSLSATTTVYVTILDENDNAPAFRQQLYEVTLDEGPSTLN---------ASLVTVQ 1669
Query: 144 ATDAD---GDKVAYKL 156
A D D KVAY +
Sbjct: 1670 ALDQDEGPNGKVAYAI 1685
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 17/106 (16%)
Query: 15 ILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74
+L + + P+ L+ + IT GN + F + S SG++ V +DRE V
Sbjct: 1884 VLARDADQGPNALLTFDITAGNTENAFYIN------------STSGIVYVNR-PLDRERV 1930
Query: 75 AQYSLVITATD----VKGINKAETHVTVDVLDENDNSPVFSQKVYR 116
A+Y L +T D ++ + + + + DENDN P+F+Q Y+
Sbjct: 1931 AEYRLTVTVKDNPENIRNARRDFDLLVISIADENDNRPLFTQGSYQ 1976
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 57/125 (45%), Gaps = 28/125 (22%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATD-- 85
+ Y IT GN + F S + GV+ T +DRE VA Y+L++ A D
Sbjct: 1041 LSYFITGGNQDGKF------------SVGFRDGVVR-TVVSLDRETVASYTLILEAIDNG 1087
Query: 86 VKGINKAETH-VTVDVLDENDNSPVFSQKVYRFIVG-DLKSSLNSNVSHWKKFSSIGSVS 143
G + T V V VLD NDN P+F Q Y V D+ ++ SSI V
Sbjct: 1088 PSGNRRTGTATVYVTVLDVNDNRPIFLQSSYEVSVPEDIPAA-----------SSIVQVK 1136
Query: 144 ATDAD 148
ATDAD
Sbjct: 1137 ATDAD 1141
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 57 SKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETH-VTVDVLDENDNSPVFSQKVY 115
+ +G L+ ++ +DRE + +Y L + A+D K+ T +TV VLD ND +P F VY
Sbjct: 952 NSTGGLVTSTAVLDRERIPEYFLRVVASDAGTPAKSSTSTLTVKVLDVNDENPTFFPAVY 1011
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 116/289 (40%), Gaps = 55/289 (19%)
Query: 28 VRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVK 87
V +S+T GN F EIR + + V + +DRE + Y+L I A+D
Sbjct: 1465 VTFSLTSGNIGRAF--------EIRTTNGTYGEVFVARP--LDRELLDHYTLRIQASDGG 1514
Query: 88 GINKAETHVT-VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKF---SSIGSVS 143
+ + HV V++LD NDN PV + S NVS + +++ V
Sbjct: 1515 VPPRRKEHVLRVNILDVNDNPPV------------IDSPFGYNVSVSENVGGGTAVAQVR 1562
Query: 144 ATDAD---GDKVAYKLAVPS-NLVVIVPQ-TGELLLTGDPPSDDVE--YELTVEAHDLQS 196
ATD D ++Y + + +L + + TGE+ PP + + Y L V D +
Sbjct: 1563 ATDRDIGLNSVLSYYITRGNEDLTFRMDRVTGEIATRPSPPDRERQSFYSLVVTVEDEGN 1622
Query: 197 PSRYAREPAQVWL---QFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFS 253
PS A V + N+P + + +D E P + VT +
Sbjct: 1623 PSLSATTTVYVTILDENDNAPAFRQQLYEVTLD---EGPSTLNASLVT--------VQAL 1671
Query: 254 ETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFE 302
+ D G++ +A+ + F+I + G++R K D+E
Sbjct: 1672 DQDEGPNGKVAYAITEGNILGTFRID--------NATGEIRTVKELDYE 1712
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 59 SGVLLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVF 110
+GV+ V G +DRE+ Y+L + A D + VT+ VLDENDNSP F
Sbjct: 1379 TGVITV-KGQVDREKGDFYTLTVVADDGGPKIDSTVKVTITVLDENDNSPQF 1429
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 73/185 (39%), Gaps = 32/185 (17%)
Query: 24 PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDRE-EVAQYSLVIT 82
P+ V Y+IT+GN TF + N T EIR T ++D E +Y+L++T
Sbjct: 1677 PNGKVAYAITEGNILGTFRIDN-ATGEIR------------TVKELDYEISHGRYTLIVT 1723
Query: 83 ATDVKGINKAETHVTVDVL----DENDNSPVFSQKV---YRFIVGDLKSSLNSNVSHWKK 135
ATD I T VL D NDN P F + + G + + ++H
Sbjct: 1724 ATDQCPIVSRRLTSTATVLVNLNDINDNCPTFPRPYEGPFDVTEGQPGPRVWTFLAHDGD 1783
Query: 136 FSSIGSVSATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVE---YELTVEAH 192
G V + GD P VI P GEL + D D Y LT+ A
Sbjct: 1784 SGPSGQVEYSIIAGD--------PLGEFVISPVEGELRVRKDAELDRENFPFYNLTIAAQ 1835
Query: 193 DLQSP 197
D P
Sbjct: 1836 DRGVP 1840
Score = 37.4 bits (85), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 94/222 (42%), Gaps = 33/222 (14%)
Query: 12 GLPILVASSHKH--PHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDI 69
LP+ + K P+ + + N NH + +PT S + K+ + + + +
Sbjct: 379 ALPLFIQVQDKDEGPNSVFEVYLVGNNSNH--FIISPT------SIQGKADIRVRVAVPL 430
Query: 70 DREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSN 129
D E + +Y + A + + V +++++ENDN PVFS+ +Y N
Sbjct: 431 DFETIPRYEFSLFANESVPDHVGFARVKINLINENDNRPVFSKVLY-------------N 477
Query: 130 VSHWKKFSSIGS----VSATDAD---GDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDD 182
VS ++ +++G+ V ATD D KV+Y + + + TG ++LT +
Sbjct: 478 VSLFEN-TTVGTTVLQVHATDNDVGTYGKVSYFFSDDPDRFSLDKDTGVIILTARLDFET 536
Query: 183 VE-YELTVEAHDLQSPSRYAREPAQVW-LQFNSPVLQDEQLL 222
+ Y LTV A D R V + N P Q E L
Sbjct: 537 TQRYTLTVIARDGGGEETTGRVRINVLDVNDNVPTFQKEAYL 578
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 69/164 (42%), Gaps = 16/164 (9%)
Query: 35 GNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINK-AE 93
N T+ L N + E E S +V + +D EEV + + A+D + AE
Sbjct: 2338 ANGQITYELLN-LSPEGYACLEDHSAGKVVANRTVDYEEVQWLNFTVRASDNGSPRRSAE 2396
Query: 94 THVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVA 153
V + ++D NDN+PVFS Y+ V + I SV+ATDAD + A
Sbjct: 2397 IPVYLQIVDINDNNPVFSHPSYQKAV----------FEDVPLGTVILSVTATDADSGQFA 2446
Query: 154 ---YKLAVPSNLVVIVPQTGEL-LLTGDPPSDDVEYELTVEAHD 193
Y L I P TG++ +L+ Y LT A D
Sbjct: 2447 LIQYSLGDGEGKFGINPNTGDIYILSALDREKKDHYTLTAVARD 2490
>gi|61806606|ref|NP_001013538.1| cadherin-6 precursor [Danio rerio]
gi|54306049|dbj|BAD66654.1| cadherin 6 [Danio rerio]
Length = 794
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 60/136 (44%), Gaps = 20/136 (14%)
Query: 23 HPHQLVRYSITQGNDNHTFALKNPTTHEIRN-----STESKSGVLLVTSG--DIDREEVA 75
H V Q D+ F + I+ S E +G++ G D+DRE+
Sbjct: 168 HIGTFVTQVTAQDADDEMFGYSAKLAYSIKEGHPYFSVEPNTGIIRTALGPTDMDREQRE 227
Query: 76 QYSLVITATDV---KGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSH 132
Y +VI A D+ KG T V + + D NDN+P F Q +Y+F V +L
Sbjct: 228 HYQVVIEAKDMAGQKGGLIGSTTVNISLTDINDNAPHFKQGIYQFSVPELT--------- 278
Query: 133 WKKFSSIGSVSATDAD 148
K SS+G + A DAD
Sbjct: 279 -KVGSSVGRIEAEDAD 293
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 68/151 (45%), Gaps = 23/151 (15%)
Query: 56 ESKSGVLLVTSGDIDREEVAQYSLVITATDVK-GIN-KAETHVTVDVLDENDNSPVFSQK 113
++ SG L T +DREE YSL A + K GI + ET V + D NDN P F ++
Sbjct: 99 DANSGDLHATRS-LDREEKPSYSLRAQAVNRKTGIPLEPETEFIVKLHDINDNEPKFDKE 157
Query: 114 VYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD------KVAYKLAVPSNLVVIVP 167
VY V + SH F + V+A DAD + K+AY + + P
Sbjct: 158 VYTASVPE--------GSHIGTF--VTQVTAQDADDEMFGYSAKLAYSIKEGHPYFSVEP 207
Query: 168 QTGELLLTGDPPSDDVE----YELTVEAHDL 194
TG + P D E Y++ +EA D+
Sbjct: 208 NTGIIRTALGPTDMDREQREHYQVVIEAKDM 238
>gi|74762698|sp|Q96TA0.1|PCDBI_HUMAN RecName: Full=Putative protocadherin beta-18; Short=PCDH-beta-18;
AltName: Full=PCDH-psi2
gi|14009451|gb|AAK51611.1|AF217743_1 protocadherin-psi2 [Homo sapiens]
gi|193787867|dbj|BAG53070.1| unnamed protein product [Homo sapiens]
Length = 734
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 65/135 (48%), Gaps = 24/135 (17%)
Query: 31 SITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN 90
++ DN F LK PT K+ LVT +DRE +Y++ IT TD+
Sbjct: 328 TVCSIQDNLPFVLK-PTF---------KNFYALVTEHPLDREVRNEYNITITVTDLGTPR 377
Query: 91 -KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149
K E ++TV V D NDN+P+F+Q Y V + NS H IGSVSATD D
Sbjct: 378 LKTEHNITVLVSDVNDNAPIFTQTSYTLFVRE----NNSPALH------IGSVSATDRDS 427
Query: 150 D---KVAYKLAVPSN 161
+V Y L P +
Sbjct: 428 GTNAQVTYSLLPPQD 442
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 35 GNDNHTFALKNPTTH-EIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGINKA- 92
G N+T + NP H ++R+S E + LV +DRE+V+++SL +TA D ++
Sbjct: 112 GVQNYTIS-PNPHFHLKLRDSDEGRKYPELVLDQSLDREKVSEFSLTLTAVDGGSPPRSG 170
Query: 93 ETHVTVDVLDENDNSPVFSQKVY 115
T + V VLD +DN+P F + VY
Sbjct: 171 TTLINVVVLDISDNAPEFEKPVY 193
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.312 0.130 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,321,582,880
Number of Sequences: 23463169
Number of extensions: 228336592
Number of successful extensions: 496714
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 6738
Number of HSP's that attempted gapping in prelim test: 445864
Number of HSP's gapped (non-prelim): 41299
length of query: 325
length of database: 8,064,228,071
effective HSP length: 142
effective length of query: 183
effective length of database: 9,027,425,369
effective search space: 1652018842527
effective search space used: 1652018842527
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 77 (34.3 bits)