Query psy2920
Match_columns 325
No_of_seqs 175 out of 1490
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 21:00:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2920.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2920hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2a62_A Cadherin-8; extracellul 100.0 4.6E-49 1.6E-53 363.1 24.9 276 1-322 10-302 (322)
2 3q2w_A Cadherin-2; cell adhesi 100.0 1E-43 3.5E-48 350.5 30.5 276 1-322 118-424 (559)
3 3q2v_A Cadherin-1; cell adhesi 100.0 1.5E-43 5.3E-48 348.7 31.6 276 1-322 118-419 (550)
4 3q2w_A Cadherin-2; cell adhesi 100.0 6.6E-44 2.3E-48 352.0 29.0 277 1-322 10-311 (559)
5 3q2v_A Cadherin-1; cell adhesi 100.0 8.1E-44 2.8E-48 350.7 28.3 274 1-323 10-309 (550)
6 1l3w_A EP-cadherin, C-cadherin 100.0 9.4E-44 3.2E-48 349.8 26.8 278 1-321 124-423 (546)
7 3ubh_A Neural-cadherin; cell a 100.0 6.5E-43 2.2E-47 333.6 31.5 266 1-322 123-404 (419)
8 1l3w_A EP-cadherin, C-cadherin 100.0 1E-43 3.5E-48 349.5 26.5 273 1-322 16-314 (546)
9 3ubf_A Neural-cadherin; cell a 100.0 1.6E-41 5.6E-46 312.5 31.6 264 8-321 4-298 (316)
10 1q55_A EP-cadherin, C-cadherin 100.0 2.2E-42 7.6E-47 355.7 26.8 278 1-321 273-572 (880)
11 1q55_A EP-cadherin, C-cadherin 100.0 7.4E-42 2.5E-46 351.8 26.7 273 1-322 165-463 (880)
12 3ubh_A Neural-cadherin; cell a 100.0 7.3E-41 2.5E-45 319.4 30.0 264 7-319 8-300 (419)
13 2a4e_A Cadherin-11; dimer, cal 100.0 9E-38 3.1E-42 271.8 24.2 190 1-219 11-214 (215)
14 3mvs_A Cadherin-23, otocadheri 100.0 1.4E-37 4.7E-42 269.9 21.7 186 1-218 20-210 (210)
15 2x2u_A Proto-oncogene tyrosine 100.0 9.4E-39 3.2E-43 283.6 9.4 196 1-222 13-245 (246)
16 2qvi_A Cadherin-2; beta barrel 100.0 2.3E-36 8E-41 263.0 20.1 185 1-213 10-215 (215)
17 3ppe_A Vascular endothelial ca 100.0 1.7E-35 5.8E-40 255.4 24.2 181 1-213 10-203 (203)
18 3qrb_A Cadherin-1; cell adhesi 100.0 1.2E-35 4.2E-40 258.3 21.8 183 1-213 10-213 (213)
19 3lnd_A CDH6 protein, cadherin 100.0 4.2E-36 1.4E-40 260.0 14.3 184 1-213 10-207 (207)
20 3k5r_A Cadherin 13; mouse, str 100.0 3.1E-35 1.1E-39 256.6 19.3 182 1-213 11-218 (218)
21 3ubf_A Neural-cadherin; cell a 100.0 1.6E-33 5.5E-38 259.1 23.2 187 1-218 118-316 (316)
22 2a62_A Cadherin-8; extracellul 100.0 1.6E-33 5.6E-38 259.3 20.3 187 1-212 116-322 (322)
23 3mvs_A Cadherin-23, otocadheri 100.0 1.5E-30 5E-35 225.7 17.5 179 105-321 3-189 (210)
24 4apx_B Protocadherin-15, otoca 100.0 1.4E-29 4.7E-34 223.6 18.8 188 1-213 27-237 (242)
25 2a4e_A Cadherin-11; dimer, cal 100.0 7.6E-28 2.6E-32 209.1 21.0 173 114-322 5-192 (215)
26 3qrb_A Cadherin-1; cell adhesi 100.0 8.4E-28 2.9E-32 208.8 19.0 175 116-322 6-199 (213)
27 2x2u_A Proto-oncogene tyrosine 100.0 1.1E-29 3.9E-34 225.1 6.5 177 109-319 2-218 (246)
28 2qvi_A Cadherin-2; beta barrel 100.0 8E-28 2.7E-32 209.1 18.0 173 116-322 6-198 (215)
29 3k5r_A Cadherin 13; mouse, str 99.9 2.9E-27 1E-31 206.1 16.0 173 116-320 7-200 (218)
30 3lnd_A CDH6 protein, cadherin 99.9 1.4E-27 4.7E-32 206.5 12.1 173 116-322 6-191 (207)
31 3ppe_A Vascular endothelial ca 99.9 6.3E-26 2.2E-30 195.4 22.1 171 115-320 5-186 (203)
32 2yst_A Protocadherin-7; BH-PCD 99.9 1.9E-25 6.4E-30 176.2 8.7 110 98-219 2-119 (119)
33 4apx_B Protocadherin-15, otoca 99.9 3E-23 1E-27 183.0 18.8 180 113-322 20-220 (242)
34 2ee0_A Protocadherin-9; Ca dom 99.9 5.9E-24 2E-28 166.2 8.7 104 98-215 2-114 (114)
35 2yqg_A Desmoglein-2, HDGC; cad 99.8 2.5E-20 8.7E-25 147.4 7.2 96 1-112 22-122 (123)
36 2yst_A Protocadherin-7; BH-PCD 99.8 6.8E-20 2.3E-24 144.2 8.7 93 1-108 24-119 (119)
37 1ncg_A N-cadherin; cell adhesi 99.8 1.2E-19 4E-24 140.7 9.3 92 1-110 12-110 (110)
38 1wyj_A Protocadherin beta 14; 99.8 4.2E-20 1.4E-24 146.4 1.9 99 1-118 18-123 (125)
39 2yqg_A Desmoglein-2, HDGC; cad 99.8 3.1E-19 1.1E-23 141.1 5.2 108 103-223 5-122 (123)
40 2ee0_A Protocadherin-9; Ca dom 99.7 1.3E-17 4.4E-22 130.0 7.8 88 1-104 24-114 (114)
41 1ncg_A N-cadherin; cell adhesi 99.7 3.8E-17 1.3E-21 126.5 9.0 93 114-221 6-110 (110)
42 1zvn_A Mn-cadherin; strand dim 99.7 1.2E-16 4.2E-21 121.0 9.6 85 1-102 11-99 (99)
43 3k6d_A T-cadherin; cell adhesi 99.7 1E-16 3.5E-21 121.7 8.6 86 115-213 5-99 (99)
44 3k6f_A T-cadherin; cell adhesi 99.7 1.9E-16 6.5E-21 120.4 9.3 85 116-213 7-100 (100)
45 1zxk_A Cadherin-8; strand dime 99.7 3E-16 1E-20 118.7 10.1 85 1-102 10-98 (98)
46 3k6d_A T-cadherin; cell adhesi 99.7 4E-16 1.4E-20 118.3 9.8 83 1-102 10-99 (99)
47 3k6i_A T-cadherin; cell adhesi 99.6 1E-15 3.5E-20 116.1 10.7 87 116-213 6-99 (99)
48 3k6f_A T-cadherin; cell adhesi 99.6 9.9E-16 3.4E-20 116.4 10.4 83 1-102 11-100 (100)
49 3k6i_A T-cadherin; cell adhesi 99.6 1.3E-15 4.4E-20 115.6 10.9 83 1-102 10-99 (99)
50 1zvn_A Mn-cadherin; strand dim 99.6 3E-15 1E-19 113.4 11.6 86 115-213 6-99 (99)
51 1zxk_A Cadherin-8; strand dime 99.6 2.8E-15 9.5E-20 113.4 11.4 86 115-213 5-98 (98)
52 2omz_B Epithelial-cadherin; le 99.6 2.2E-15 7.6E-20 115.5 9.7 85 1-103 14-105 (105)
53 2omz_B Epithelial-cadherin; le 99.6 2.1E-15 7.1E-20 115.6 8.9 87 116-214 10-105 (105)
54 1wyj_A Protocadherin beta 14; 99.5 5.7E-15 1.9E-19 116.8 2.7 97 112-224 10-118 (125)
55 1wuz_A Pcdha4 protein, CNR-EC1 99.5 6.6E-15 2.2E-19 112.4 2.3 88 1-106 10-103 (103)
56 1wuz_A Pcdha4 protein, CNR-EC1 99.0 3.9E-11 1.4E-15 91.3 1.0 89 113-217 3-103 (103)
57 3pdd_A Glycoside hydrolase, fa 95.9 0.62 2.1E-05 38.5 17.2 115 73-212 59-179 (190)
58 2yhg_A SDE_182CT, cellulose-bi 93.3 0.46 1.6E-05 44.4 10.1 65 145-211 365-436 (437)
59 3pdd_A Glycoside hydrolase, fa 82.6 18 0.00063 29.4 18.7 35 181-219 59-93 (190)
60 3rb5_A Na/Ca exchange protein; 80.1 30 0.001 30.4 15.3 85 62-159 78-164 (298)
61 1op4_A Neural-cadherin; beta s 79.5 7.1 0.00024 31.1 7.5 81 104-196 30-111 (159)
62 2kpn_A Bacillolysin; solution 74.5 9.8 0.00034 27.9 6.6 46 62-108 46-91 (103)
63 2yhg_A SDE_182CT, cellulose-bi 72.3 25 0.00086 32.7 10.2 62 26-100 370-436 (437)
64 2yrl_A KIAA1837 protein; PKD d 72.3 7.5 0.00026 28.3 5.5 32 73-105 67-98 (102)
65 2yrl_A KIAA1837 protein; PKD d 71.4 8.3 0.00028 28.1 5.6 65 146-218 33-100 (102)
66 3rb5_A Na/Ca exchange protein; 59.1 92 0.0031 27.2 13.1 20 104-123 6-25 (298)
67 3pe9_A Fibronectin(III)-like m 56.7 52 0.0018 23.6 9.2 29 74-102 60-88 (98)
68 1op4_A Neural-cadherin; beta s 51.0 35 0.0012 27.0 6.1 53 249-319 57-109 (159)
69 2y72_A Collagenase, collagenas 50.5 35 0.0012 23.5 5.5 30 71-101 55-84 (85)
70 2y72_A Collagenase, collagenas 46.4 68 0.0023 22.0 8.2 58 144-211 26-83 (85)
71 3pe9_A Fibronectin(III)-like m 44.7 84 0.0029 22.5 10.9 66 137-211 18-86 (98)
72 2kpn_A Bacillolysin; solution 42.2 50 0.0017 24.0 5.3 33 178-214 54-86 (103)
73 3ead_A Na/Ca exchange protein; 38.5 1.3E+02 0.0043 22.8 8.5 43 105-159 2-46 (137)
74 3lpw_A A77-A78 domain from tit 36.1 1.4E+02 0.0049 22.7 11.1 19 179-197 69-87 (197)
75 3ead_A Na/Ca exchange protein; 35.9 83 0.0029 23.8 6.1 27 96-123 107-133 (137)
76 3ott_A Two-component system se 34.0 1.1E+02 0.0039 29.9 8.3 57 151-212 690-747 (758)
77 1u2c_A Dystroglycan; IG-like d 31.0 2.4E+02 0.0083 23.8 8.5 83 111-217 15-103 (246)
78 3gin_A Sodium/calcium exchange 28.4 2.1E+02 0.0072 22.3 7.8 54 93-159 9-65 (160)
79 4a2l_A BT_4663, two-component 26.0 2.5E+02 0.0087 27.5 9.3 55 151-211 725-780 (795)
80 3knb_B Obscurin-like protein 1 24.4 1.8E+02 0.0063 20.3 9.9 74 107-195 13-92 (107)
81 3v9f_A Two-component system se 23.8 2.6E+02 0.009 27.3 8.9 55 151-211 719-774 (781)
82 2e7m_A Protein KIAA0319; PKD d 23.3 1.2E+02 0.0041 22.4 4.6 38 167-210 67-104 (113)
83 2ptt_B Natural killer cell rec 23.2 1.3E+02 0.0043 22.3 4.6 47 160-212 65-111 (112)
84 3knb_A Titin; IG-like, titin, 21.0 2.1E+02 0.0071 19.6 9.9 86 107-212 5-98 (100)
No 1
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=4.6e-49 Score=363.10 Aligned_cols=276 Identities=21% Similarity=0.268 Sum_probs=236.6
Q ss_pred CCC--CCCCceEEeeEEEecCCCCCCCceEEEEEeeCCCCceEEEeCCCCccccccccCCcceEEEecccCCcccccEEE
Q psy2920 1 MEN--SKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYS 78 (325)
Q Consensus 1 ~En--~~~Gt~v~~~~a~d~D~~~~~~~~i~y~i~~~~~~~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~~~~~ 78 (325)
+|| .+.|+.|+++. +|.|.+ ++.++|+|.+++....|.|++.+| .|.+.++||||....|.
T Consensus 10 ~E~~~~~~~~~v~~va-~D~D~g---~~~i~Y~l~~~~~~~~F~Id~~tG-------------~i~~~~~LDrE~~~~y~ 72 (322)
T 2a62_A 10 LEEFSGPEPILVGRLH-TDLDPG---SKKIKYILSGDGAGTIFQINDITG-------------DIHAIKRLDREEKAEYT 72 (322)
T ss_dssp CCSCCCSSCEECCCCC-CCCCCS---SCCCEEEEEETTBTTTEEEETTTT-------------EEEECSCCCTTTCSBCC
T ss_pred ccccCCCCCEEEEEEE-EcCCCC---CCEEEEEEECCCCCCcEEEeCCcC-------------EEEEeccCCcccccEEE
Confidence 588 88999999996 677765 378999999865557899999999 99999999999999999
Q ss_pred EEEEEEeCCCC-C-eeEEEEEEEEecCCCCCCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCC------C
Q psy2920 79 LVITATDVKGI-N-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG------D 150 (325)
Q Consensus 79 l~v~a~D~~~~-~-~~~~~v~v~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~------~ 150 (325)
|+|.|+|.++. + ++.+.+.|.|+|+|||+|.|....|.+.|+|+.++| +.|+++.|+|+|. +
T Consensus 73 l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~g----------t~v~~v~A~D~D~~~~G~n~ 142 (322)
T 2a62_A 73 LTAQAVDFETNKPLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILG----------TSVTNVTATDADDPVYGNSA 142 (322)
T ss_dssp EEEEEECTTTCSEEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTT----------CBCCCCCCCBCSCSSSTTSS
T ss_pred EEEEEEECCCCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCC----------CEEEEEEEEeCCCCCCCccE
Confidence 99999998753 2 678899999999999999999999999999999999 9999999999994 4
Q ss_pred eEEEEEecCCCcEEEeCCceEEEEc-cC-CCCCCceEEEEEEEEeCCCCC--CcceecEEEEEEEecCCCCCceeeeccc
Q psy2920 151 KVAYKLAVPSNLVVIVPQTGELLLT-GD-PPSDDVEYELTVEAHDLQSPS--RYAREPAQVWLQFNSPVLQDEQLLQMID 226 (325)
Q Consensus 151 ~v~Y~i~~~~~~F~i~~~tG~i~l~-~~-d~e~~~~y~l~V~a~D~g~p~--~~s~~t~~v~I~v~d~~~~P~~~~~~~~ 226 (325)
.++|+|.++.++|.|++.+|.|++. +. |||....|.|.|+|+|+|.|+ +++ +++|+|+|.|+|++||.|.+.
T Consensus 143 ~i~Y~i~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~p~~~~s~--~~~v~I~V~DvNDn~P~F~~~-- 218 (322)
T 2a62_A 143 KLVYSILEGQPYFSIEPETAIIKTALPNMDREAKEEYLVVIQAKDMGGHSGGLSG--TTTLTVTLTDVNDNPPKFAQS-- 218 (322)
T ss_dssp CEEEEEEECTTTEEECTTTCCEEECSSCCCGGGCSEEEEEEEEEESCSSSSCCBC--CEEEEEEECCCCCCCCCCSCS--
T ss_pred EEEEEEccCCCCEEEecCCCEEEecccCCCcccCCeEEEEEEEEECCCCCCCcee--EEEEEEEEEecCCCCCeecCC--
Confidence 8999999988999999999999998 66 999999999999999999875 555 899999999988877766653
Q ss_pred cCCCCccceeeeeEeeccCC---ceEEEEEeCCCCccceEEEEEEeCCcccceEeeCCCCceEeCCCeeEEEceeCcccc
Q psy2920 227 RKSEAPHRIEKRRVTRAVRP---TKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEE 303 (325)
Q Consensus 227 ~~~~~~~~~~~~~v~~~~~~---~~~v~a~d~D~~~~~~i~y~i~~~~~~~~F~i~~~~~~f~i~~tG~i~~~~~lD~E~ 303 (325)
.| ...+.|+.++ +.++.|+|.|.+.|+.++|+|..++..+.|.|+.+.. ..+|.|++.++||||.
T Consensus 219 -~y-------~~~v~En~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~g~~~~~F~I~~d~~----~~tG~i~~~~~LD~E~ 286 (322)
T 2a62_A 219 -LY-------HFSVPEDVVLGTAIGRVKANDQDIGENAQSSYDIIDGDGTALFEITSDAQ----AQDGVIRLRKPLDFET 286 (322)
T ss_dssp -EE-------EEEECSCCSSCCEEEEEECCCSSCGGGTCCEEEEC---CCSSBCCBCCTT----TSEEEEEBCSCCCCSS
T ss_pred -Cc-------eeEeECCCCCCcEEEEEEEEeCCCCCCceEEEEEECCCCCCcEEEeccCC----CceEEEEECCcCCccc
Confidence 23 3455555543 5678999999999999999999988888899984210 0489999999999999
Q ss_pred CCCCceEEEEEEEecCCCC
Q psy2920 304 LGPEKTIDFWVTINNQATN 322 (325)
Q Consensus 304 ~~~~~~~~l~V~a~D~~~~ 322 (325)
. +.|.|+|+|+|.|.+
T Consensus 287 ~---~~y~l~V~A~D~g~p 302 (322)
T 2a62_A 287 K---KSYTLKVEAANIHID 302 (322)
T ss_dssp C---CEEEEEEEEECCCSS
T ss_pred C---CeEEEEEEEEECCCC
Confidence 8 899999999999854
No 2
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=1e-43 Score=350.55 Aligned_cols=276 Identities=21% Similarity=0.244 Sum_probs=233.9
Q ss_pred CCCCCCCceEEeeEEEecCCCCCCCceEEEEEeeCCCC----ceEEEeCCCCccccccccCCcceEEEecc-cCCccccc
Q psy2920 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDN----HTFALKNPTTHEIRNSTESKSGVLLVTSG-DIDREEVA 75 (325)
Q Consensus 1 ~En~~~Gt~v~~~~a~d~D~~~~~~~~i~y~i~~~~~~----~~F~i~~~~g~~~~~~~~~~~~~~l~~~~-~LDrE~~~ 75 (325)
+||+++|+.|+++.|+|+|.+.+.|+.++|+|.++.+. ..|.|++.+| .|.+.+ .||||...
T Consensus 118 ~En~~~Gt~v~~v~A~D~D~g~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG-------------~i~~~~~~LD~E~~~ 184 (559)
T 3q2w_A 118 PEGSKPGTYVMTVTAIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETG-------------DIITVAAGLDREKVQ 184 (559)
T ss_dssp ETTCCTTCEEEECCEECSSCTTSGGGCCEEEEEEEESCCSCTTCEEECTTTC-------------EEEECCSCCCTTTCC
T ss_pred eCCCCCCcEEEEEEEEcCCCCCCCceEEEEEEecCCCCCCCcceEEEeCCce-------------EEEEEeccCCcccCC
Confidence 69999999999999999999866679999999875432 6899999999 888877 99999999
Q ss_pred EEEEEEEEEeCCC---C-CeeEEEEEEEEecCCCCCCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCCC-
Q psy2920 76 QYSLVITATDVKG---I-NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD- 150 (325)
Q Consensus 76 ~~~l~v~a~D~~~---~-~~~~~~v~v~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~~- 150 (325)
.|.|.|+|+|+++ + .+++++|.|+|+|+|||+|+|....|.+.|+|+. +| +.|+++.|+|+|.+
T Consensus 185 ~y~l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~~~~y~~~V~En~-~g----------~~v~~v~a~D~D~~~ 253 (559)
T 3q2w_A 185 QYTLIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENR-VD----------VIVANLTVTDKDQPH 253 (559)
T ss_dssp EEEEEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCCEESSSEEEEEEESSC-SS----------EEEEEEEEECCSCTT
T ss_pred EEEEEEEEEECCCCCCCCccceEEEEEEEEeCCCCCCccccccceeEecCCC-CC----------cEEEEEEEEcCCCCC
Confidence 9999999999865 2 3789999999999999999999999999999997 78 99999999999974
Q ss_pred ----eEEEEEecC--CCcEEE----eCCceEEEEccC-CCCCCceEEEEEEEEeCCC------CCCcceecEEEEEEEec
Q psy2920 151 ----KVAYKLAVP--SNLVVI----VPQTGELLLTGD-PPSDDVEYELTVEAHDLQS------PSRYAREPAQVWLQFNS 213 (325)
Q Consensus 151 ----~v~Y~i~~~--~~~F~i----~~~tG~i~l~~~-d~e~~~~y~l~V~a~D~g~------p~~~s~~t~~v~I~v~d 213 (325)
.+.|+|..+ .++|.| +..+|.|++.+. |||....|.|+|+|+|++. |++++ +++|+|+|.|
T Consensus 254 ~~n~~~~y~i~~g~~~~~F~I~~~~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~g~~~~~~s--~~~v~I~V~D 331 (559)
T 3q2w_A 254 TPAWNAAYRISGGDPTGRFAILTDPNSNDGLVTVVKPIDFETNRMFVLTVAAENQVPLAKGIQHPPQS--TATVSVTVID 331 (559)
T ss_dssp STTTSBCCEEEESCTTCCEEEEECTTTCEEEEEECSCCCTTTCSEEEEEEECCBSSCCCTTCCCCGGG--EEEEEEEEEC
T ss_pred CCceeEEEEEecCCCCCceEEEecCCCCcEEEEeCCCCCCccCceEEEEEEEEcCCccccCCCCCCce--EEEEEEEEEe
Confidence 599999874 478999 578999999999 9999999999999999752 45666 8999999999
Q ss_pred CCCCCceeeeccccCCCCccceeeeeEeeccCC---ceEEEEEeCCCCccceEEEEEEeCCcccceEeeCCCCceEeCCC
Q psy2920 214 PVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRP---TKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDEN 290 (325)
Q Consensus 214 ~~~~P~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~v~a~d~D~~~~~~i~y~i~~~~~~~~F~i~~~~~~f~i~~t 290 (325)
+|++|. |.+. .+...+.|+.++ +.++.|+|.|.+.|+.++|+|.... .+.|.|++ .+
T Consensus 332 vND~P~-f~~~----------~~~~~v~En~~~g~~v~~v~A~D~D~g~n~~i~Ysi~~~~-~~~f~Id~--------~t 391 (559)
T 3q2w_A 332 VNENPY-FAPN----------PKIIRQEEGLHAGTMLTTLTAQDPDRYMQQNIRYTKLSDP-ANWLKIDP--------VN 391 (559)
T ss_dssp CCCCCE-ESSS----------EEEEEEESCCCTTCEEEECCEECSCSSSCCCEEEEEEECT-TCCEEECT--------TT
T ss_pred CCCCCc-cccc----------ceEEEEeCCCCCCCEEEEEEEECCCCCCCCceEEEEccCC-ccceEecC--------Cc
Confidence 998765 5442 223455666554 5678999999999999999998643 34566665 59
Q ss_pred eeEEEceeCccccCC-CCceEEEEEEEecCCCC
Q psy2920 291 GDVRVKKRWDFEELG-PEKTIDFWVTINNQATN 322 (325)
Q Consensus 291 G~i~~~~~lD~E~~~-~~~~~~l~V~a~D~~~~ 322 (325)
|.|++.+.||||... ....|+|+|.|+|.|.+
T Consensus 392 G~i~~~~~lDrE~~~~~~~~y~l~V~A~D~g~p 424 (559)
T 3q2w_A 392 GQITTIAVLDRESPNVKNNIYNATFLASDNGIP 424 (559)
T ss_dssp CEEEESSCCCSSSTTSCSSEEEEEEEEEECSSS
T ss_pred eEEEEccccCcccccccCCEEEEEEEEEcCCCC
Confidence 999999999999621 01699999999999864
No 3
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=1.5e-43 Score=348.68 Aligned_cols=276 Identities=20% Similarity=0.290 Sum_probs=233.6
Q ss_pred CCCCCCCceEEeeEEEecCCC-CCCCceEEEEEeeCC----CCceEEEeCCCCccccccccCCcceEEEe-cccCCcccc
Q psy2920 1 MENSKSGTGVKGLPILVASSH-KHPHQLVRYSITQGN----DNHTFALKNPTTHEIRNSTESKSGVLLVT-SGDIDREEV 74 (325)
Q Consensus 1 ~En~~~Gt~v~~~~a~d~D~~-~~~~~~i~y~i~~~~----~~~~F~i~~~~g~~~~~~~~~~~~~~l~~-~~~LDrE~~ 74 (325)
+|++++|+.|+++.|+|+|.+ ...|+.+.|+|.+++ ..+.|.|++.+| .|.+ .++||||..
T Consensus 118 ~E~~~~Gt~v~~v~A~D~D~g~~~~N~~i~Ysi~~~~~~~~~~~~F~id~~tG-------------~i~~~~~~LDrE~~ 184 (550)
T 3q2v_A 118 AEGAVPGTSVMKVSATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTG-------------VISVLTSGLDRESY 184 (550)
T ss_dssp ETTCCTTCEEEECCBCCCSCTTTCGGGCCEEEEEEEESCCSSSCSEEECTTTC-------------EEEECSSCCCTTTC
T ss_pred eCCCCCCCEEEEEEEEeCCCCCCCcceEEEEEEecCCCCCCcCCceEEcCCCe-------------EEEEccCCCCcccC
Confidence 599999999999999999987 335799999998754 236899999998 7776 579999999
Q ss_pred cEEEEEEEEEeCCCCC-eeEEEEEEEEecCCCCCCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCCC---
Q psy2920 75 AQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD--- 150 (325)
Q Consensus 75 ~~~~l~v~a~D~~~~~-~~~~~v~v~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~~--- 150 (325)
..|.|.|+|+|+|++. +++++|.|+|+|+|||+|+|....|.+.|+|+ ++| +.|+++.|+|+|.+
T Consensus 185 ~~y~l~V~A~D~g~~~~s~t~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~g----------~~v~~v~a~D~D~~~n~ 253 (550)
T 3q2v_A 185 PTYTLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFNPSTYQGQVPEN-EVN----------ARIATLKVTDDDAPNTP 253 (550)
T ss_dssp SEEEEEEEEESGGGTSCCCEEEEEEEEECCSCSCCEESSSEEEEEEESS-CSS----------CCCEEECEECCSCTTST
T ss_pred cEEEEEEEEEcCCCCCeeEEEEEEEEecccCCCCCEEecceeEEEEecC-CCC----------CEEEEEEEEECCCCCCC
Confidence 9999999999987765 78999999999999999999999999999999 888 99999999999984
Q ss_pred --eEEEEEec-CCCcEEEe----CCceEEEEccC-CCCCCceEEEEEEEEeCCC---CCCcceecEEEEEEEecCCCCCc
Q psy2920 151 --KVAYKLAV-PSNLVVIV----PQTGELLLTGD-PPSDDVEYELTVEAHDLQS---PSRYAREPAQVWLQFNSPVLQDE 219 (325)
Q Consensus 151 --~v~Y~i~~-~~~~F~i~----~~tG~i~l~~~-d~e~~~~y~l~V~a~D~g~---p~~~s~~t~~v~I~v~d~~~~P~ 219 (325)
.+.|+|.+ ..++|.|+ ..+|.|++.+. |||....|.|.|+|+|++. +.+++ +++|+|+|.|+|++|.
T Consensus 254 ~~~~~ysi~~~~~~~F~i~~d~~~~tG~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~~~--~~~v~I~V~DvND~P~ 331 (550)
T 3q2v_A 254 AWKAVYTVVNDPDQQFVVVTDPTTNDGILKTAKGLDFEAKQQYILHVRVENEEPFEGSLVPS--TATVTVDVVDVNEAPI 331 (550)
T ss_dssp TTCEEEEESSCSSCCEEEEECTTTCCEEEEESSCCCTTTCSEEEEEEEEEESSCCCSSCCCE--EEEEEEEEECCCCCCE
T ss_pred cEEEEEEEEeCCCCcEEEEecCCCccEEEEecccCCccccceEEEEEEEEeCCCCCCCccce--EEEEEEEEEecCCCCe
Confidence 57899986 45789998 78999999999 9999999999999999874 44555 8999999999988544
Q ss_pred eeeeccccCCCCccceeeeeEeeccCC---ceEEEEEeCCCCccceEEEEEEeCCcccceEeeCCCCceEeCCCeeEEEc
Q psy2920 220 QLLQMIDRKSEAPHRIEKRRVTRAVRP---TKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK 296 (325)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~v~a~d~D~~~~~~i~y~i~~~~~~~~F~i~~~~~~f~i~~tG~i~~~ 296 (325)
|.+. .|. ..+.|+.++ +..+.|+|.|.+.++.++|+|... ..+.|.|++ .+|.|++.
T Consensus 332 -f~~~---~~~-------~~v~E~~~~gt~v~~v~A~D~D~g~n~~i~y~i~~~-~~~~f~id~--------~tG~i~~~ 391 (550)
T 3q2v_A 332 -FMPA---ERR-------VEVPEDFGVGQEITSYTAREPDTFMDQKITYRIWRD-TANWLEINP--------ETGAIFTR 391 (550)
T ss_dssp -ESSS---SCE-------EEEETTCCSSCEEEECCEECCCCSTTCCCEEEEEEC-TTCCEEECT--------TTCEEEEC
T ss_pred -EcCc---ceE-------EEEecCCCCCCEEEEEeCCCCCCCCCCCEEEEEecC-CCCcEEEeC--------CCcEEEEC
Confidence 6543 233 355555554 567899999999999999999653 345677765 69999999
Q ss_pred eeCccccCC--CCceEEEEEEEecCCCC
Q psy2920 297 KRWDFEELG--PEKTIDFWVTINNQATN 322 (325)
Q Consensus 297 ~~lD~E~~~--~~~~~~l~V~a~D~~~~ 322 (325)
++||||... ....|.|+|+|+|.|.+
T Consensus 392 ~~lDrE~~~~~~~~~y~l~V~A~D~g~p 419 (550)
T 3q2v_A 392 AEMDREDAEHVKNSTYVALIIATDDGSP 419 (550)
T ss_dssp SCCCTTCTTTCCSSEEEEEEEEECCSSS
T ss_pred CccCcccccccCCCEEEEEEEEEeCCCC
Confidence 999999741 11589999999999864
No 4
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=6.6e-44 Score=351.95 Aligned_cols=277 Identities=22% Similarity=0.306 Sum_probs=233.3
Q ss_pred CCCCCCCceEEeeEEEecCCCCCCCceEEEEEeeCCCC----ceEEEeCCCCccccccccCCcceEEEecccCCcccccE
Q psy2920 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDN----HTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQ 76 (325)
Q Consensus 1 ~En~~~Gt~v~~~~a~d~D~~~~~~~~i~y~i~~~~~~----~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~~~ 76 (325)
+||++ |+....+.+.+.|.+. |+.++|+|.+++.. +.|.|++.+| .|.+.++||||..+.
T Consensus 10 ~En~~-g~~~~~i~~~~~D~~~--n~~i~Ysi~~~~~~~~~~~~F~id~~tG-------------~l~~~~~LDrE~~~~ 73 (559)
T 3q2w_A 10 PENSR-GPFPQELVRIRSDRDK--NLSLRYSVTGPGADQPPTGIFIINPISG-------------QLSVTKPLDRELIAR 73 (559)
T ss_dssp ESSCC-CCSSEEEEECCCGGGG--TSCEEEEEESBTTTBSSTTSEEECTTTC-------------EEEECSCCCTTTCSE
T ss_pred eCCCC-CCCCeEEEEEeeCCCC--CcEEEEEEECCCCCCCCCceEEEeCCce-------------EEEECCccCCCCCce
Confidence 58887 7776667666776655 48999999976433 6899999999 999999999999999
Q ss_pred EEEEEEEEeCCCCC-eeEEEEEEEEecCCCCCCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCC-----C
Q psy2920 77 YSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG-----D 150 (325)
Q Consensus 77 ~~l~v~a~D~~~~~-~~~~~v~v~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~-----~ 150 (325)
|.|++.|+|.+++. ++.+.|.|+|+|+|||+|+|.+..|.++|+|+.++| +.|+++.|+|+|. +
T Consensus 74 y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~G----------t~v~~v~A~D~D~g~~~n~ 143 (559)
T 3q2w_A 74 FHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPG----------TYVMTVTAIDADDPNALNG 143 (559)
T ss_dssp EEEEEEEEETTSCEEEEEEEEEEEEECCCCCCCEESCSEEEEEEETTCCTT----------CEEEECCEECSSCTTSGGG
T ss_pred EEEEEEEEECCCCccceeEEEEEEEEeCCCCCCccCCCeeEEEEeCCCCCC----------cEEEEEEEEcCCCCCCCce
Confidence 99999999998866 678899999999999999999999999999999999 9999999999996 4
Q ss_pred eEEEEEecC------CCcEEEeCCceEEEEcc-C-CCCCCceEEEEEEEEeCCC-C--CCcceecEEEEEEEecCCCCCc
Q psy2920 151 KVAYKLAVP------SNLVVIVPQTGELLLTG-D-PPSDDVEYELTVEAHDLQS-P--SRYAREPAQVWLQFNSPVLQDE 219 (325)
Q Consensus 151 ~v~Y~i~~~------~~~F~i~~~tG~i~l~~-~-d~e~~~~y~l~V~a~D~g~-p--~~~s~~t~~v~I~v~d~~~~P~ 219 (325)
+++|+|.++ .++|.|++.+|.|++.+ . |||....|.|.|+|+|+++ | ++++ +++|+|+|.|+|++||
T Consensus 144 ~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~g~p~~~~s~--t~~v~I~V~DvNDn~P 221 (559)
T 3q2w_A 144 MLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSN--TATAVITVTDVNDNPP 221 (559)
T ss_dssp CCEEEEEEEESCCSCTTCEEECTTTCEEEECCSCCCTTTCCEEEEEEEEEHHHHCTTTCCEE--EEEEEEEEECCSCSCC
T ss_pred EEEEEEecCCCCCCCcceEEEeCCceEEEEEeccCCcccCCEEEEEEEEEECCCCCCCCccc--eEEEEEEEEeCCCCCC
Confidence 799999863 26899999999999988 5 9999999999999999865 3 3555 8999999999888777
Q ss_pred eeeeccccCCCCccceeeeeEeeccCC--ceEEEEEeCCCCc--cceEEEEEEeCCcccceEeeCCCCceEeCCCeeEEE
Q psy2920 220 QLLQMIDRKSEAPHRIEKRRVTRAVRP--TKRIDFSETDGEM--EGRIVFALEKETEREKFKIRDENPWITVDENGDVRV 295 (325)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~v~a~d~D~~~--~~~i~y~i~~~~~~~~F~i~~~~~~f~i~~tG~i~~ 295 (325)
.|.+. .|... +.|+... +..+.|+|.|.+. ++.+.|+|..++..+.|.|..+.. ..+|.|++
T Consensus 222 ~f~~~---~y~~~-------V~En~~g~~v~~v~a~D~D~~~~~n~~~~y~i~~g~~~~~F~I~~~~~----~~~G~i~~ 287 (559)
T 3q2w_A 222 EFTAM---TFYGE-------VPENRVDVIVANLTVTDKDQPHTPAWNAAYRISGGDPTGRFAILTDPN----SNDGLVTV 287 (559)
T ss_dssp EESSS---EEEEE-------EESSCSSEEEEEEEEECCSCTTSTTTSBCCEEEESCTTCCEEEEECTT----TCEEEEEE
T ss_pred ccccc---cceeE-------ecCCCCCcEEEEEEEEcCCCCCCCceeEEEEEecCCCCCceEEEecCC----CCcEEEEe
Confidence 67664 23334 4444311 5678999999876 668999999998888999953210 15999999
Q ss_pred ceeCccccCCCCceEEEEEEEecCCCC
Q psy2920 296 KKRWDFEELGPEKTIDFWVTINNQATN 322 (325)
Q Consensus 296 ~~~lD~E~~~~~~~~~l~V~a~D~~~~ 322 (325)
.++||||.. ..|.|+|+|+|.+.+
T Consensus 288 ~~~LD~E~~---~~y~l~V~A~D~~~~ 311 (559)
T 3q2w_A 288 VKPIDFETN---RMFVLTVAAENQVPL 311 (559)
T ss_dssp CSCCCTTTC---SEEEEEEECCBSSCC
T ss_pred CCCCCCccC---ceEEEEEEEEcCCcc
Confidence 999999998 999999999998653
No 5
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=8.1e-44 Score=350.69 Aligned_cols=274 Identities=23% Similarity=0.299 Sum_probs=232.0
Q ss_pred CCCCC--CCceEEeeEEEecCCCCCCCceEEEEEeeCCC----CceEEEeCCCCccccccccCCcceEEEecccCCcccc
Q psy2920 1 MENSK--SGTGVKGLPILVASSHKHPHQLVRYSITQGND----NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74 (325)
Q Consensus 1 ~En~~--~Gt~v~~~~a~d~D~~~~~~~~i~y~i~~~~~----~~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~ 74 (325)
+||.. .++.|+++.+ |.|. ++.++|+|.+.+. .+.|.|++.+| .|.+.++||||..
T Consensus 10 ~En~~~~~~~~v~~v~a-d~d~----~~~v~Ysi~~~~~~~~~~~~F~Id~~tG-------------~l~~~~~LDrE~~ 71 (550)
T 3q2v_A 10 PENEKGEFPKNLVQIKS-NRDK----ETKVFYSITGQGADKPPVGVFIIERETG-------------WLKVTQPLDREAI 71 (550)
T ss_dssp ETTCCSSSSEEEEECEE-GGGG----TSCEEEEEESBTTTBSSCSSEEECTTTC-------------EEEECSCCCTTTC
T ss_pred eCCCCCCcCeEEEEEec-CCCC----CceEEEEEECCCCCCCCCceEEEeCCce-------------EEEECCccCcccC
Confidence 58874 6788999987 5554 3789999997433 35899999999 9999999999999
Q ss_pred cEEEEEEEEEeCCCCC-eeEEEEEEEEecCCCCCCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCCC---
Q psy2920 75 AQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD--- 150 (325)
Q Consensus 75 ~~~~l~v~a~D~~~~~-~~~~~v~v~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~~--- 150 (325)
+.|.|.+.|+|.+++. +..+.|.|+|+|+|||+|.|.+..|.++|+|+.++| +.|+++.|+|+|.+
T Consensus 72 ~~y~l~v~a~d~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~E~~~~G----------t~v~~v~A~D~D~g~~~ 141 (550)
T 3q2v_A 72 AKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPG----------TSVMKVSATDADDDVNT 141 (550)
T ss_dssp SEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCCBSCSEEEEEEETTCCTT----------CEEEECCBCCCSCTTTC
T ss_pred CeeEEEEEEEeCCCCcccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCC----------CEEEEEEEEeCCCCCCC
Confidence 9999999999998765 677899999999999999999999999999999999 99999999999975
Q ss_pred ---eEEEEEecC------CCcEEEeCCceEEEEc-cC-CCCCCceEEEEEEEEeCCCCCCcceecEEEEEEEecCCCCCc
Q psy2920 151 ---KVAYKLAVP------SNLVVIVPQTGELLLT-GD-PPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDE 219 (325)
Q Consensus 151 ---~v~Y~i~~~------~~~F~i~~~tG~i~l~-~~-d~e~~~~y~l~V~a~D~g~p~~~s~~t~~v~I~v~d~~~~P~ 219 (325)
.++|+|.++ .++|+|++.+|.|++. +. |||....|.|+|+|+|+|++++++ +++|+|+|.|+|++||
T Consensus 142 ~N~~i~Ysi~~~~~~~~~~~~F~id~~tG~i~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~--t~~v~I~V~DvNDn~P 219 (550)
T 3q2v_A 142 YNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLST--TAKAVITVKDINDNAP 219 (550)
T ss_dssp GGGCCEEEEEEEESCCSSSCSEEECTTTCEEEECSSCCCTTTCSEEEEEEEEESGGGTSCCC--EEEEEEEEECCSCSCC
T ss_pred cceEEEEEEecCCCCCCcCCceEEcCCCeEEEEccCCCCcccCcEEEEEEEEEcCCCCCeeE--EEEEEEEecccCCCCC
Confidence 799999863 4689999999999875 45 999999999999999999888888 8999999999888777
Q ss_pred eeeeccccCCCCccceeeeeEeeccCC---ceEEEEEeCCCCccc--eEEEEEEeCCcccceEeeCCCCceEeCCCeeEE
Q psy2920 220 QLLQMIDRKSEAPHRIEKRRVTRAVRP---TKRIDFSETDGEMEG--RIVFALEKETEREKFKIRDENPWITVDENGDVR 294 (325)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~v~a~d~D~~~~~--~i~y~i~~~~~~~~F~i~~~~~~f~i~~tG~i~ 294 (325)
.|.+. .|.. .+.|+ ++ +.++.|+|.|.+.++ .+.|+|.. +..+.|.|+.+.. ..+|.|+
T Consensus 220 ~F~~~---~y~~-------~V~En-~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~-~~~~~F~i~~d~~----~~tG~i~ 283 (550)
T 3q2v_A 220 VFNPS---TYQG-------QVPEN-EVNARIATLKVTDDDAPNTPAWKAVYTVVN-DPDQQFVVVTDPT----TNDGILK 283 (550)
T ss_dssp EESSS---EEEE-------EEESS-CSSCCCEEECEECCSCTTSTTTCEEEEESS-CSSCCEEEEECTT----TCCEEEE
T ss_pred EEecc---eeEE-------EEecC-CCCCEEEEEEEEECCCCCCCcEEEEEEEEe-CCCCcEEEEecCC----CccEEEE
Confidence 67654 2333 44444 22 578999999998876 56799987 6677898873210 1599999
Q ss_pred EceeCccccCCCCceEEEEEEEecCCCCC
Q psy2920 295 VKKRWDFEELGPEKTIDFWVTINNQATNG 323 (325)
Q Consensus 295 ~~~~lD~E~~~~~~~~~l~V~a~D~~~~~ 323 (325)
+.++||||.. ..|.|.|+|+|.+.+.
T Consensus 284 ~~~~LD~E~~---~~y~l~V~a~D~~~~~ 309 (550)
T 3q2v_A 284 TAKGLDFEAK---QQYILHVRVENEEPFE 309 (550)
T ss_dssp ESSCCCTTTC---SEEEEEEEEEESSCCC
T ss_pred ecccCCcccc---ceEEEEEEEEeCCCCC
Confidence 9999999998 9999999999998643
No 6
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=9.4e-44 Score=349.82 Aligned_cols=278 Identities=19% Similarity=0.272 Sum_probs=233.0
Q ss_pred CCCCCCCceEEeeEEEecCCC-CCCCceEEEEEeeCC----CCceEEEeCCCCccccccccCCcceEEEec-ccCCcccc
Q psy2920 1 MENSKSGTGVKGLPILVASSH-KHPHQLVRYSITQGN----DNHTFALKNPTTHEIRNSTESKSGVLLVTS-GDIDREEV 74 (325)
Q Consensus 1 ~En~~~Gt~v~~~~a~d~D~~-~~~~~~i~y~i~~~~----~~~~F~i~~~~g~~~~~~~~~~~~~~l~~~-~~LDrE~~ 74 (325)
+|++++|+.|+++.|+|+|.+ ...|+.++|+|.++. ....|.|++.+| .|.+. +.||||..
T Consensus 124 ~En~~~gt~v~~v~A~D~D~g~~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG-------------~i~~~~~~LD~E~~ 190 (546)
T 1l3w_A 124 REGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETG-------------VISLIGTGLDREKF 190 (546)
T ss_dssp ETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTC-------------EEEECSCCCCTTTC
T ss_pred ECCCCCCCEEEEEEEEcCCCCCCCCCCEEEEEEeCCCCCcccCCcEEEeCCCc-------------eEEEeccCCCcccC
Confidence 599999999999999999987 335699999999865 246899999999 78875 78999999
Q ss_pred cEEEEEEEEEeCCCCC-eeEEEEEEEEecCCCCCCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCC--C--
Q psy2920 75 AQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD--G-- 149 (325)
Q Consensus 75 ~~~~l~v~a~D~~~~~-~~~~~v~v~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D--~-- 149 (325)
..|.|+|+|+|.+++. ++++.|.|+|+|+|||+|+|....|.+.|+|+ ++| +.|++|.|+|+| .
T Consensus 191 ~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~g----------t~v~~v~A~D~D~~~g~ 259 (546)
T 1l3w_A 191 PEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIG----------FEVQRLSVTDLDMPGTP 259 (546)
T ss_dssp CEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCC----------CEEEEECBCCCSCTTST
T ss_pred ceEEEEEEEEECCCCCcceEEEEEEEEeecCCCCCccccccceEEEEeC-CCC----------CEEEEEEEEeCCCCCCC
Confidence 9999999999998765 78999999999999999999999999999999 888 999999999999 3
Q ss_pred -CeEEEEEec-CCCcEEEe----CCceEEEEccC-CCCCCceEEEEEEEEeCCC---CCCcceecEEEEEEEecCCCCCc
Q psy2920 150 -DKVAYKLAV-PSNLVVIV----PQTGELLLTGD-PPSDDVEYELTVEAHDLQS---PSRYAREPAQVWLQFNSPVLQDE 219 (325)
Q Consensus 150 -~~v~Y~i~~-~~~~F~i~----~~tG~i~l~~~-d~e~~~~y~l~V~a~D~g~---p~~~s~~t~~v~I~v~d~~~~P~ 219 (325)
+.++|+|.+ ..++|.|+ ..+|.|++.+. |||....|.|.|+|+|++. |++++ +++|+|+|.|+|+ ||
T Consensus 260 n~~v~y~i~~~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~a~D~~~~~~~~~s~--~~~v~I~V~DvND-~P 336 (546)
T 1l3w_A 260 AWQAVYKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTS--TATVTVTVEDVNE-AP 336 (546)
T ss_dssp TSCEECCBSCCTTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEESSCCSSCCCCC--CEEEEEEEECCCC-CC
T ss_pred CcEEEEEEEeCCCceEEEEecCCCCeEEEEECccCCcccccEEEEEEEEEECCCCCCCCcce--eEEEEEEEEcCCC-CC
Confidence 589999986 55799996 36899999999 9999999999999999874 45666 8999999999988 55
Q ss_pred eeeeccccCCCCccceeeeeEeeccCCceEEEEEeCCCCccceEEEEEEeCCcccceEeeCCCCceEeCCCeeEEEceeC
Q psy2920 220 QLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299 (325)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~v~a~d~D~~~~~~i~y~i~~~~~~~~F~i~~~~~~f~i~~tG~i~~~~~l 299 (325)
.|.+. .|.+.+.|+... +.. +.++.|+|.|.+.++.++|+|..+ ..+.|.|++ .+|.|++.++|
T Consensus 337 ~f~~~---~y~~~V~En~~~-g~~---v~~v~A~D~D~g~n~~i~ysi~~~-~~~~F~Id~--------~tG~i~~~~~l 400 (546)
T 1l3w_A 337 FFVPA---VSRVDVSEDLSR-GEK---IISLVAQDPDKQQIQKLSYFIGND-PARWLTVNK--------DNGIVTGNGNL 400 (546)
T ss_dssp EESSC---EECCCBCTTCCS-SEE---EEECCEECCCTTCCCCEEEEECCC-SSCCCEEET--------TTTEEEECSCC
T ss_pred cEecc---eEEEEEeCCCCC-CCE---EEEEEEECCCCCCCceEEEEECCC-CCCcEEEeC--------CcEEEEECCcc
Confidence 46554 344444443211 111 467899999999999999999864 345677765 59999999999
Q ss_pred ccccCC-CCceEEEEEEEecCCC
Q psy2920 300 DFEELG-PEKTIDFWVTINNQAT 321 (325)
Q Consensus 300 D~E~~~-~~~~~~l~V~a~D~~~ 321 (325)
|||... ....|+|.|+|+|.|.
T Consensus 401 D~E~~~~~~~~y~l~V~a~D~g~ 423 (546)
T 1l3w_A 401 DRESEYVKNNTYTVIMLVTDDGV 423 (546)
T ss_dssp CTTSSSCCSSCCEEEEEEEECSS
T ss_pred CCccccCCCCEEEEEEEEEECCC
Confidence 999841 1158999999999985
No 7
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=6.5e-43 Score=333.56 Aligned_cols=266 Identities=17% Similarity=0.215 Sum_probs=228.3
Q ss_pred CCCCCCCceEEeeEEEecCCCCCCCceEEEEEeeCCCCceEEEeCCCCccccccccCCcceEEEecccCCcccccEEEEE
Q psy2920 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLV 80 (325)
Q Consensus 1 ~En~~~Gt~v~~~~a~d~D~~~~~~~~i~y~i~~~~~~~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~~~~~l~ 80 (325)
+|++++|+.|+++.|+|+|.+.+ +.|+|..++....|.|++.+| .|.+.+.||||....|.|+
T Consensus 123 ~E~~~~gt~v~~v~A~D~D~g~n----~~y~i~~~~~~~~F~I~~~tG-------------~i~~~~~ld~e~~~~y~l~ 185 (419)
T 3ubh_A 123 QLNAPPNTPVFTLQARDPDTDHN----IHYFIVRDRTGGRFEVDERSG-------------VVRTRGTDLFQLDMEYVLY 185 (419)
T ss_dssp CTTCCTTCEEEECCEECSSTTCC----EEEEEEEESSSSCEEECTTTC-------------EEEECSSSCCCBTCEEEEE
T ss_pred eCCCCCCCEEEEEEEECCCCCce----eEEEEEeCCCCCeEEEeCCce-------------EEEEecccccccccEEEEE
Confidence 69999999999999999998753 999999876668999999999 8999999999999999999
Q ss_pred EEEEeCCCC----C-eeEEEEEEEEecCCCCCCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCCCeEEEE
Q psy2920 81 ITATDVKGI----N-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYK 155 (325)
Q Consensus 81 v~a~D~~~~----~-~~~~~v~v~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~~~v~Y~ 155 (325)
|+|+|++++ . ++++.+.|.|.| |||+|+|.+..|.+.|+|+.++| +.|++|.|+|+|.+.++|+
T Consensus 186 V~A~D~g~~~~~~~~~~t~~v~I~V~d-ndn~P~F~~~~y~~~v~En~~~g----------t~v~~v~A~D~dn~~i~Ys 254 (419)
T 3ubh_A 186 VKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKD----------SDIISIKAKSFADREIRYT 254 (419)
T ss_dssp EEEEEEEEEC--CCEEECCCEEEEEEE-SCCCCEESSSCEEEEEETTCCTT----------CEEEECCEECSSCCCCEEE
T ss_pred EEEEECCCCccCcccccceEEEEEEEC-CCCCCceecCeeEEEecCCCCCC----------cEEEEEEEecCCCCceEEE
Confidence 999998763 2 577889999999 99999999999999999999999 9999999999999999999
Q ss_pred Eec---CCCcEEEeCCceEEEEccC-CCCCCc---eEEEEEEEEeCCCCCCcceecEEEEEEEecCCCCCceeeeccccC
Q psy2920 156 LAV---PSNLVVIVPQTGELLLTGD-PPSDDV---EYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRK 228 (325)
Q Consensus 156 i~~---~~~~F~i~~~tG~i~l~~~-d~e~~~---~y~l~V~a~D~g~p~~~s~~t~~v~I~v~d~~~~P~~~~~~~~~~ 228 (325)
|.. +.++|+|++.+|.|++.+. |||... .|.|.|+|+|.+ +++++ +++|+|+|.|+|++||.|.++ .
T Consensus 255 i~~~~~~~~~F~I~~~tG~i~~~~~LD~E~~~~~~~y~l~V~a~dd~-~~~s~--~~~v~I~V~DvNDn~P~f~~~---~ 328 (419)
T 3ubh_A 255 LKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDS-GGFST--SVDLTIRVTDVNDNAPKFELP---D 328 (419)
T ss_dssp EEESSSCCSSEEECTTTCEEEECSCCCTTCTTSCSEEEEEEEEECTT-TSCEE--EEEEEEEEECCCCCCCEESSS---E
T ss_pred EecCCCCCCcEEEECCCCEEEECcccCccccccccEEEEEEEEEeCC-CCcEE--EEEEEEEEEccCCCCCcccCC---c
Confidence 973 3579999999999999999 999865 799999999754 34555 889999999988877767654 1
Q ss_pred CCCccceeeeeEeeccCC---ceEEEEEeCCCCccceEEEEEEeCCcccceEeeCCCCceEeCCCeeEEEceeCcccc-C
Q psy2920 229 SEAPHRIEKRRVTRAVRP---TKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEE-L 304 (325)
Q Consensus 229 ~~~~~~~~~~~v~~~~~~---~~~v~a~d~D~~~~~~i~y~i~~~~~~~~F~i~~~~~~f~i~~tG~i~~~~~lD~E~-~ 304 (325)
|.. ..+.|+.++ +.++.|+|.|.+.|+.++|+|.. ++|.|+ .+|.|++.++||||. .
T Consensus 329 ~~~------~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~----~~F~Id---------~~G~i~~~~~ld~E~~~ 389 (419)
T 3ubh_A 329 YQA------HNVDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD----DHFAVD---------SNGIIVNNKQLDADNNN 389 (419)
T ss_dssp EEE------EEEETTCCTTCEEEECCEECSSCGGGGCEEEEESC----TTEEEC---------TTCEEEECSCSSSSCTT
T ss_pred cee------EEecCCCCCCCEEEEEEEEeCCCCCCCEEEEEEcC----CcEEEC---------CCeEEEECcccCcccCC
Confidence 211 135555554 56789999999999999999954 246664 589999999999998 5
Q ss_pred CCCceEEEEEEEecCCCC
Q psy2920 305 GPEKTIDFWVTINNQATN 322 (325)
Q Consensus 305 ~~~~~~~l~V~a~D~~~~ 322 (325)
..|+|.|.|+|.|.+
T Consensus 390 ---~~y~l~V~a~D~G~p 404 (419)
T 3ubh_A 390 ---AYYEFIVTAKDKGEP 404 (419)
T ss_dssp ---CEEEEEEEEEECCSS
T ss_pred ---ceEEEEEEEEECCcC
Confidence 789999999999865
No 8
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=1e-43 Score=349.51 Aligned_cols=273 Identities=25% Similarity=0.318 Sum_probs=229.1
Q ss_pred CCCCC--CCceEEeeEEEecCCCCCCCceEEEEEeeCCC----CceEEEeCCCCccccccccCCcceEEEecccCCcccc
Q psy2920 1 MENSK--SGTGVKGLPILVASSHKHPHQLVRYSITQGND----NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74 (325)
Q Consensus 1 ~En~~--~Gt~v~~~~a~d~D~~~~~~~~i~y~i~~~~~----~~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~ 74 (325)
|||++ .+..|+++. +|.+ .++.++|+|.+++. .+.|.|++.+| .|.+.++||||..
T Consensus 16 ~En~~g~~~~~v~~~~---~d~d--~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG-------------~l~~~~~LDrE~~ 77 (546)
T 1l3w_A 16 SENERGPFPKRLVQIK---SNKD--RFNKVYYSITGQGADNPPQGVFRIEWETG-------------WMLVTRPLDREEY 77 (546)
T ss_dssp ESSCCSSSCEEEEECC---CSGG--GSSCEEEEEEEBTTTBSSTTSEEECTTTC-------------EEEECSCCCTTTC
T ss_pred cCCCCCCCCcEEEEEE---cCCC--CCceEEEEEECCCCCCCCCceEEEeCCcc-------------EEEECCcCCcccC
Confidence 68987 234466665 3333 35899999998653 35899999999 9999999999999
Q ss_pred cEEEEEEEEEeCCCCC-eeEEEEEEEEecCCCCCCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCCC---
Q psy2920 75 AQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD--- 150 (325)
Q Consensus 75 ~~~~l~v~a~D~~~~~-~~~~~v~v~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~~--- 150 (325)
..|.|.|+|+|.+++. ++.+.|+|.|+|+|||+|+|.+..|.++|+|+.++| +.|+++.|+|+|.+
T Consensus 78 ~~y~l~v~A~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~g----------t~v~~v~A~D~D~g~~~ 147 (546)
T 1l3w_A 78 DKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPG----------TQVMAVSATDEDDNIDS 147 (546)
T ss_dssp CEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSS----------EEEEECCEECCSCCSSS
T ss_pred ceEEEEEEEEeCCCCcccceEEEEEEEEecccCcCEecCceeEEEEECCCCCC----------CEEEEEEEEcCCCCCCC
Confidence 9999999999998765 677999999999999999999999999999999999 99999999999974
Q ss_pred ---eEEEEEecCC------CcEEEeCCceEEEEc-cC-CCCCCceEEEEEEEEeCCCCCCcceecEEEEEEEecCCCCCc
Q psy2920 151 ---KVAYKLAVPS------NLVVIVPQTGELLLT-GD-PPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDE 219 (325)
Q Consensus 151 ---~v~Y~i~~~~------~~F~i~~~tG~i~l~-~~-d~e~~~~y~l~V~a~D~g~p~~~s~~t~~v~I~v~d~~~~P~ 219 (325)
.++|+|.++. ++|.|++.+|.|++. +. |||....|.|+|+|+|+|+|++++ +++|+|+|.|+|++||
T Consensus 148 ~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~--~~~v~I~V~DvNDn~P 225 (546)
T 1l3w_A 148 LNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSV--EGKAIIQITDANDNAP 225 (546)
T ss_dssp STTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEE--ECCEEEEEECCCCCCC
T ss_pred CCCEEEEEEeCCCCCcccCCcEEEeCCCceEEEeccCCCcccCceEEEEEEEEECCCCCcce--EEEEEEEEeecCCCCC
Confidence 7999998743 699999999999986 45 999999999999999999888877 8899999999887666
Q ss_pred eeeeccccCCCCccceeeeeEeeccCC---ceEEEEEeCC--CCccceEEEEEEeCCcccceEeeCCCCceEeCCCeeEE
Q psy2920 220 QLLQMIDRKSEAPHRIEKRRVTRAVRP---TKRIDFSETD--GEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVR 294 (325)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~v~a~d~D--~~~~~~i~y~i~~~~~~~~F~i~~~~~~f~i~~tG~i~ 294 (325)
.|.+. .| ...+.|+ ++ +.++.|+|.| .+.|+.++|+|.. +..+.|.|+.+.. ..+|.|+
T Consensus 226 ~F~~~---~y-------~~~V~En-~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~-~~~~~F~I~~d~~----~~~G~i~ 289 (546)
T 1l3w_A 226 IFDPK---TY-------TALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV-NEGGFFNITTDPE----SNQGILT 289 (546)
T ss_dssp CBSCS---EE-------EEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC-CTTSCEEEEECTT----TCCEEEE
T ss_pred ccccc---cc-------eEEEEeC-CCCCEEEEEEEEeCCCCCCCCcEEEEEEEe-CCCceEEEEecCC----CCeEEEE
Confidence 56554 23 3445555 33 4678999999 6789999999988 6677899963210 1489999
Q ss_pred EceeCccccCCCCceEEEEEEEecCCCC
Q psy2920 295 VKKRWDFEELGPEKTIDFWVTINNQATN 322 (325)
Q Consensus 295 ~~~~lD~E~~~~~~~~~l~V~a~D~~~~ 322 (325)
+.++||||.. ..|.|.|+|+|.+..
T Consensus 290 ~~~~LD~E~~---~~y~l~V~a~D~~~~ 314 (546)
T 1l3w_A 290 TAKGLDFELR---KQYVLQITVENAEPF 314 (546)
T ss_dssp ESSCCCCSSC---CCEEEEECCEESSCC
T ss_pred ECccCCcccc---cEEEEEEEEEECCCC
Confidence 9999999998 899999999998754
No 9
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=1.6e-41 Score=312.46 Aligned_cols=264 Identities=17% Similarity=0.207 Sum_probs=208.2
Q ss_pred ceEEeeEEEecCCCCCCCceEEEEEeeCCCCc---------eEEEeCCCCccccccccCCcceEEEecccCCccc-----
Q psy2920 8 TGVKGLPILVASSHKHPHQLVRYSITQGNDNH---------TFALKNPTTHEIRNSTESKSGVLLVTSGDIDREE----- 73 (325)
Q Consensus 8 t~v~~~~a~d~D~~~~~~~~i~y~i~~~~~~~---------~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~----- 73 (325)
..+.++.|+|+|.+.+ +.+.|+|..+++.. +|.|++ +| .|.+.++||||.
T Consensus 4 ~p~~~~~atd~D~g~n--g~v~y~l~~~~~~~~f~i~~~~~~F~i~~-tG-------------~l~~~~~LD~E~~~~~~ 67 (316)
T 3ubf_A 4 RPTKRIEFTEADGDTE--GKSVFQLEKETDKETFKIRDDNPWVTVET-NG-------------AVRVKKKWDYEELGPEK 67 (316)
T ss_dssp EEEEEEEEESGGGCST--TCEEEECCCSSTTCEEEESSCCSSEEECT-TS-------------EEEESSCCCGGGSCTTC
T ss_pred CceEEEEEEecCCCCC--ceEEEEEEcCCCcceEEEeCCCCeEEECC-Ce-------------EEEECCccChhhccccc
Confidence 4567888888887654 88888887665433 455555 66 899999999998
Q ss_pred ccEEEEEEEEEeCCCCC--eeEEEEEEEEecCCCCCCccCcce--eEEEEeccCCCCCCCcccccceeEEEEEEEEeCCC
Q psy2920 74 VAQYSLVITATDVKGIN--KAETHVTVDVLDENDNSPVFSQKV--YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149 (325)
Q Consensus 74 ~~~~~l~v~a~D~~~~~--~~~~~v~v~V~DvNdn~P~f~~~~--~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~ 149 (325)
...|.|.|.|.|.+.+. ++.+.|.|.|+|+|||+|.|.... |.+.|+|+.++| +.|+++.|+|+|.
T Consensus 68 ~~~~~l~v~a~d~~~~~~~s~~~~v~I~V~DvNDn~P~F~~~~~~y~~~v~En~~~g----------t~v~~v~A~D~D~ 137 (316)
T 3ubf_A 68 TIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPN----------TPVFTLQARDPDT 137 (316)
T ss_dssp EEEEEEEEEC-------CCCEEEEEEEEEECTTCCCCEECCSSSSEEEEECTTCCTT----------CEEEECCEECSST
T ss_pred ceEEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccCCCCCCEEEEEeCCCCCC----------CEEEEEEEECCCC
Confidence 45789999999987542 788999999999999999999876 899999999999 9999999999998
Q ss_pred C-eEEEEEec--CCCcEEEeCCceEEEEccC-CCCCCceEEEEEEEEeCCC----CCCcceecEEEEEEEecCCCCCcee
Q psy2920 150 D-KVAYKLAV--PSNLVVIVPQTGELLLTGD-PPSDDVEYELTVEAHDLQS----PSRYAREPAQVWLQFNSPVLQDEQL 221 (325)
Q Consensus 150 ~-~v~Y~i~~--~~~~F~i~~~tG~i~l~~~-d~e~~~~y~l~V~a~D~g~----p~~~s~~t~~v~I~v~d~~~~P~~~ 221 (325)
+ .++|+|.. ..++|.|++.+|.|++.+. |||....|.|.|+|+|+|+ |++++ +++|+|.|.|+|++|. |
T Consensus 138 g~ni~Y~i~~~~~~~~F~Id~~tG~i~~~~~lD~e~~~~y~l~V~A~D~g~~~~~~~~~~--~~~v~I~V~dnDn~P~-F 214 (316)
T 3ubf_A 138 DHNIHYFIVRDRTGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQS--TPEERLSIVGGKRAPQ-F 214 (316)
T ss_dssp TCCEEEEEEEEESSSCEEECTTTCEEEECSSCCCCTTCEEEEEEEEEESCC-------CB--CCCEEEEEEESCCCCE-E
T ss_pred CCceEEEEEeCCCCCEEEEECCccEEEECCcCCcccCcEEEEEEEEEeCCCCCCCccccc--eEEEEEEEEcCCCCCE-E
Confidence 5 59999985 4689999999999999999 9999999999999999985 34555 7788888888555555 6
Q ss_pred eeccccCCCCccceeeeeEeeccCC---ceEEEEEeCCCCccceEEEEEE-eCCcccceEeeCCCCceEeCCCeeEEEce
Q psy2920 222 LQMIDRKSEAPHRIEKRRVTRAVRP---TKRIDFSETDGEMEGRIVFALE-KETEREKFKIRDENPWITVDENGDVRVKK 297 (325)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~v~~~~~~---~~~v~a~d~D~~~~~~i~y~i~-~~~~~~~F~i~~~~~~f~i~~tG~i~~~~ 297 (325)
.+. . |...+.|+.++ +.++.|+|.| ++.++|+|. .++..+.|.|++ .+|.|++.+
T Consensus 215 ~~~---~-------y~~~v~En~~~gt~v~~v~A~D~D---n~~i~Y~i~~~~~~~~~F~Id~--------~tG~i~~~~ 273 (316)
T 3ubf_A 215 YMP---S-------YEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKAQGQGAGTFNIGP--------TSGIVKLAK 273 (316)
T ss_dssp SSS---S-------EEEEEETTCCTTCEEEECCEECTT---CCCEEEEEEEESSCTTTEEECT--------TTCEEEECS
T ss_pred cCC---C-------ceEEEeCCCCCCCEEEEEEEEeCC---CCEEEEEEEcCCCCCCeEEEEC--------CeEEEEECC
Confidence 543 2 33456666554 4677888877 678999998 567777888876 699999999
Q ss_pred eCccccCCCCceEEEEEEEe-cCCC
Q psy2920 298 RWDFEELGPEKTIDFWVTIN-NQAT 321 (325)
Q Consensus 298 ~lD~E~~~~~~~~~l~V~a~-D~~~ 321 (325)
+||||.......|+|+|+|+ |.|.
T Consensus 274 ~LD~E~~~~~~~y~l~V~A~dd~g~ 298 (316)
T 3ubf_A 274 ELDFEDLRQPHVYSLIVTATEDSGG 298 (316)
T ss_dssp CCCSSCTTSCSEEEEEEEEEESSSS
T ss_pred cCCccccCCCceEEEEEEEEECCCC
Confidence 99999851114899999999 5553
No 10
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=2.2e-42 Score=355.70 Aligned_cols=278 Identities=19% Similarity=0.283 Sum_probs=233.3
Q ss_pred CCCCCCCceEEeeEEEecCCC-CCCCceEEEEEeeCCC----CceEEEeCCCCccccccccCCcceEEEec-ccCCcccc
Q psy2920 1 MENSKSGTGVKGLPILVASSH-KHPHQLVRYSITQGND----NHTFALKNPTTHEIRNSTESKSGVLLVTS-GDIDREEV 74 (325)
Q Consensus 1 ~En~~~Gt~v~~~~a~d~D~~-~~~~~~i~y~i~~~~~----~~~F~i~~~~g~~~~~~~~~~~~~~l~~~-~~LDrE~~ 74 (325)
+||+++|+.|+++.|+|+|.+ ...|+.++|+|.++.+ ...|.|++.+| .|.+. +.||||..
T Consensus 273 ~En~~~Gt~V~~v~AtD~D~g~~~~N~~v~Ysi~~~~~~~~~~~~F~Id~~tG-------------~I~~~~~~LDrE~~ 339 (880)
T 1q55_A 273 REGVQPGTQVMAVSATDEDDNIDSLNGVLSYSILKQDPEEPIPNLFTINRETG-------------VISLIGTGLDREKF 339 (880)
T ss_dssp ETTCCSSEEEEECCEECCSCCSSSSTTCCEEEEEEESSCCSCSCSEEECTTTC-------------EEEECSCCCCTTTC
T ss_pred eCCCCCCceeEEEEEEcCCCCCCCcCcEEEEEEcCCCCCcccCCeEEEccCCc-------------cEEEecccCCHHHc
Confidence 699999999999999999988 4457999999997652 46899999999 78875 78999999
Q ss_pred cEEEEEEEEEeCCCCC-eeEEEEEEEEecCCCCCCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCC--C--
Q psy2920 75 AQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDAD--G-- 149 (325)
Q Consensus 75 ~~~~l~v~a~D~~~~~-~~~~~v~v~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D--~-- 149 (325)
..|.|+|+|+|++++. +++++|+|+|+|+|||+|+|....|.+.|+|+ ++| +.|++|.|+|+| .
T Consensus 340 ~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~g----------t~V~~v~A~D~D~~~g~ 408 (880)
T 1q55_A 340 PEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIG----------FEVQRLSVTDLDMPGTP 408 (880)
T ss_dssp CEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCC----------CEEEEECBCCCSCTTST
T ss_pred ceeEEEEEEEECCCCCccceeEEEEEEEeccCCCCCccccceEEEeecC-CCC----------cEEEEEEEECCCCCCCC
Confidence 9999999999998765 78999999999999999999999999999999 888 999999999999 3
Q ss_pred -CeEEEEEec-CCCcEEEe--C--CceEEEEccC-CCCCCceEEEEEEEEeCCC---CCCcceecEEEEEEEecCCCCCc
Q psy2920 150 -DKVAYKLAV-PSNLVVIV--P--QTGELLLTGD-PPSDDVEYELTVEAHDLQS---PSRYAREPAQVWLQFNSPVLQDE 219 (325)
Q Consensus 150 -~~v~Y~i~~-~~~~F~i~--~--~tG~i~l~~~-d~e~~~~y~l~V~a~D~g~---p~~~s~~t~~v~I~v~d~~~~P~ 219 (325)
+.++|+|.+ ..++|.|+ + .+|.|++.+. |||....|.|+|+|+|++. |++++ +++|+|+|.|+|+ ||
T Consensus 409 n~~v~Ysi~~~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D~~~~~~~~~ss--t~tV~I~V~DvND-~P 485 (880)
T 1q55_A 409 AWQAVYKIRVNEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENAEPFSVPLPTS--TATVTVTVEDVNE-AP 485 (880)
T ss_dssp TSCEECCBSCCTTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEESSCCSSCCCCC--CEEEEEEEECCCC-CC
T ss_pred CceEEEEEecCCCceEEEEecCCCceEEEecccCCCcccCCcEEEEEEEEECCCCCCCCcce--eEEEEEEEEeCCC-CC
Confidence 579999986 55799995 3 6899999999 9999999999999999874 44566 8999999999998 55
Q ss_pred eeeeccccCCCCccceeeeeEeeccCCceEEEEEeCCCCccceEEEEEEeCCcccceEeeCCCCceEeCCCeeEEEceeC
Q psy2920 220 QLLQMIDRKSEAPHRIEKRRVTRAVRPTKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRW 299 (325)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~v~a~d~D~~~~~~i~y~i~~~~~~~~F~i~~~~~~f~i~~tG~i~~~~~l 299 (325)
.|.+. .|.+.+.|+... +.. +.++.|+|+|.+.++.++|+|..+ ..++|.|++ .+|.|++.++|
T Consensus 486 ~f~~~---~y~~~V~En~~~-Gt~---V~~v~A~D~D~g~n~~v~Ysi~~~-~~~~F~Id~--------~tG~I~~~~~L 549 (880)
T 1q55_A 486 FFVPA---VSRVDVSEDLSR-GEK---IISLVAQDPDKQQIQKLSYFIGND-PARWLTVNK--------DNGIVTGNGNL 549 (880)
T ss_dssp EESSC---EECCCBCTTCCS-SEE---EEECCEECCCTTCCCCEEEEECCC-SSCCCEEET--------TTTEEEECSCC
T ss_pred EEecC---ceEEEEeCCCCC-CCE---EEEEEEEeCCCCCCCcEEEEECCC-CCCCEEEeC--------CccEEEECCcc
Confidence 56654 344445443211 111 467899999999999999999864 345677765 69999999999
Q ss_pred ccccCCC-CceEEEEEEEecCCC
Q psy2920 300 DFEELGP-EKTIDFWVTINNQAT 321 (325)
Q Consensus 300 D~E~~~~-~~~~~l~V~a~D~~~ 321 (325)
|||.... ...|+|+|.|+|.|.
T Consensus 550 DrE~~~~~~~~y~l~V~A~D~g~ 572 (880)
T 1q55_A 550 DRESEYVKNNTYTVIMLVTDDGV 572 (880)
T ss_dssp CTTSSSCCSSCCEEEEEEEECSS
T ss_pred CcccccCCCCEEEEEEEEEECCC
Confidence 9998410 158999999999985
No 11
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=7.4e-42 Score=351.82 Aligned_cols=273 Identities=25% Similarity=0.314 Sum_probs=230.3
Q ss_pred CCCCC--CCceEEeeEEEecCCCCCCCceEEEEEeeCCC----CceEEEeCCCCccccccccCCcceEEEecccCCcccc
Q psy2920 1 MENSK--SGTGVKGLPILVASSHKHPHQLVRYSITQGND----NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74 (325)
Q Consensus 1 ~En~~--~Gt~v~~~~a~d~D~~~~~~~~i~y~i~~~~~----~~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~ 74 (325)
+||++ .|+.|+++.+ |.+ .++.++|+|.+++. .+.|.|++.+| .|.+.++||||..
T Consensus 165 ~En~~~~~~~~v~~v~~---d~d--~~~~v~Ysi~~~~~~~~~~~~F~Id~~tG-------------~l~~~~~LDrE~~ 226 (880)
T 1q55_A 165 SENERGPFPKRLVQIKS---NKD--RFNKVYYSITGQGADNPPQGVFRIEWETG-------------WMLVTRPLDREEY 226 (880)
T ss_dssp ESSCCSSSCEEEEECCC---SGG--GSSCEEEEEEEBTTTBSSTTSEEECTTTC-------------EEEECSCCCTTTC
T ss_pred eCCCCCCCCeEEEEEee---CCC--CCceEEEEEECCCCCCCcCCEEEEECCcC-------------EEEECCccCcccc
Confidence 58876 5677777753 333 34889999998643 35899999999 9999999999999
Q ss_pred cEEEEEEEEEeCCCCC-eeEEEEEEEEecCCCCCCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCCC---
Q psy2920 75 AQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD--- 150 (325)
Q Consensus 75 ~~~~l~v~a~D~~~~~-~~~~~v~v~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~~--- 150 (325)
..|.|+|+|+|.+++. ++.+.|+|+|+|+|||+|+|.+..|.++|+|+.++| +.|++|.|+|+|.+
T Consensus 227 ~~y~l~v~A~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En~~~G----------t~V~~v~AtD~D~g~~~ 296 (880)
T 1q55_A 227 DKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFTQDVFRGSVREGVQPG----------TQVMAVSATDEDDNIDS 296 (880)
T ss_dssp CEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCEESSSCEEEEEETTCCSS----------EEEEECCEECCSCCSSS
T ss_pred CccEEEEEEEECCCCceeeeEEEEEEEEecCCCCCCccCCcEEEEEeCCCCCC----------ceeEEEEEEcCCCCCCC
Confidence 9999999999998765 678999999999999999999999999999999999 99999999999974
Q ss_pred ---eEEEEEecCC------CcEEEeCCceEEEEc-cC-CCCCCceEEEEEEEEeCCCCCCcceecEEEEEEEecCCCCCc
Q psy2920 151 ---KVAYKLAVPS------NLVVIVPQTGELLLT-GD-PPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDE 219 (325)
Q Consensus 151 ---~v~Y~i~~~~------~~F~i~~~tG~i~l~-~~-d~e~~~~y~l~V~a~D~g~p~~~s~~t~~v~I~v~d~~~~P~ 219 (325)
.++|+|.++. ++|+|++.+|.|++. +. |||....|.|+|+|+|+++|++++ +++|+|+|.|+|++||
T Consensus 297 ~N~~v~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~--~~~v~I~V~DvNDn~P 374 (880)
T 1q55_A 297 LNGVLSYSILKQDPEEPIPNLFTINRETGVISLIGTGLDREKFPEYTLTVQATDLEGAGLSV--EGKAIIQITDANDNAP 374 (880)
T ss_dssp STTCCEEEEEEESSCCSCSCSEEECTTTCEEEECSCCCCTTTCCEEEEEEEEEHHHHTSCEE--ECCEEEEEECCCCCCC
T ss_pred cCcEEEEEEcCCCCCcccCCeEEEccCCccEEEecccCCHHHcceeEEEEEEEECCCCCccc--eeEEEEEEEeccCCCC
Confidence 7999998643 689999999999986 45 999999999999999999888877 8899999999887666
Q ss_pred eeeeccccCCCCccceeeeeEeeccCC---ceEEEEEeCC--CCccceEEEEEEeCCcccceEeeCCCCceEeCCCeeEE
Q psy2920 220 QLLQMIDRKSEAPHRIEKRRVTRAVRP---TKRIDFSETD--GEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVR 294 (325)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~v~a~d~D--~~~~~~i~y~i~~~~~~~~F~i~~~~~~f~i~~tG~i~ 294 (325)
.|.+. .| ...+.|+ ++ +.++.|+|.| .+.|+.++|+|.. +..+.|.|+.+.. .++|.|+
T Consensus 375 ~F~~~---~y-------~~~V~En-~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~-~~~~~F~I~~d~~----~~~G~i~ 438 (880)
T 1q55_A 375 IFDPK---TY-------TALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRV-NEGGFFNITTDPE----SNQGILT 438 (880)
T ss_dssp CBSCS---EE-------EEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSC-CTTSCEEEEECTT----TCCEEEE
T ss_pred Ccccc---ce-------EEEeecC-CCCcEEEEEEEECCCCCCCCCceEEEEEec-CCCceEEEEecCC----CceEEEe
Confidence 56654 23 3445555 33 5678999999 6788999999988 7777899963210 1489999
Q ss_pred EceeCccccCCCCceEEEEEEEecCCCC
Q psy2920 295 VKKRWDFEELGPEKTIDFWVTINNQATN 322 (325)
Q Consensus 295 ~~~~lD~E~~~~~~~~~l~V~a~D~~~~ 322 (325)
+.++||||.. ..|.|+|+|+|.+..
T Consensus 439 ~~~~LD~E~~---~~y~l~V~A~D~~~~ 463 (880)
T 1q55_A 439 TAKGLDFELR---KQYVLQITVENAEPF 463 (880)
T ss_dssp ESSCCCCSSC---CCEEEEECCEESSCC
T ss_pred cccCCCcccC---CcEEEEEEEEECCCC
Confidence 9999999998 899999999998754
No 12
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=7.3e-41 Score=319.41 Aligned_cols=264 Identities=17% Similarity=0.214 Sum_probs=216.6
Q ss_pred CceEEeeEEEecCCCCCCCceEEEEEeeCCCCceEEEeC--------CCCccccccccCCcceEEEecccCCcccc---c
Q psy2920 7 GTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKN--------PTTHEIRNSTESKSGVLLVTSGDIDREEV---A 75 (325)
Q Consensus 7 Gt~v~~~~a~d~D~~~~~~~~i~y~i~~~~~~~~F~i~~--------~~g~~~~~~~~~~~~~~l~~~~~LDrE~~---~ 75 (325)
...+.+++|+|+|.+.+ +.+.|+|.+++....|.|++ .+| .|.+.++||||.. .
T Consensus 8 ~~Pv~~v~AtD~D~g~n--~~v~Ysi~~~~~~~~F~I~~~~~~f~v~~tG-------------~i~~~~~LD~E~~~~~~ 72 (419)
T 3ubh_A 8 VRPTKRIEFTEADGDTE--GKSVFQLEKETDKETFKIRDDNPWVTVETNG-------------AVRVKKKWDYEELGPEK 72 (419)
T ss_dssp EEEEEEEEEEGGGGCST--TCEEEECCCSSTTCEEEESSCCSSEEECTTS-------------EEEESSCCCGGGSCTTC
T ss_pred ccceEEEEEEcccCCCC--ceEEEEEecCCCCceEEEcCCCccEEECCCc-------------EEEECCccCccccCccc
Confidence 35678899999998654 99999999877778999997 677 8999999999998 6
Q ss_pred EEEEEEEEEeCCCC----CeeEEEEEEEEecCCCCCCccCcce--eEEEEeccCCCCCCCcccccceeEEEEEEEEeCCC
Q psy2920 76 QYSLVITATDVKGI----NKAETHVTVDVLDENDNSPVFSQKV--YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG 149 (325)
Q Consensus 76 ~~~l~v~a~D~~~~----~~~~~~v~v~V~DvNdn~P~f~~~~--~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~ 149 (325)
.|.|.|.|+|.+.+ .++.+.|.|+|+|+|||+|+|.... |.+.|+|+.++| +.|+++.|+|+|.
T Consensus 73 ~~~~~V~a~d~g~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~~~~~~~v~E~~~~g----------t~v~~v~A~D~D~ 142 (419)
T 3ubh_A 73 TIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFINRPLPMQAVVQLNAPPN----------TPVFTLQARDPDT 142 (419)
T ss_dssp EEEEEEEEEC--CCSSSCCEEEEEEEEEEECCCCSCCEECCSSSSCEEEECTTCCTT----------CEEEECCEECSST
T ss_pred eEEEEEEEEeCCCCCCCCCcceEEEEEEEEECCCCCCcccCCCCcEEEEEeCCCCCC----------CEEEEEEEECCCC
Confidence 89999999998643 2678999999999999999999876 899999999999 9999999999998
Q ss_pred C-eEEEEEecC--CCcEEEeCCceEEEEccC-CCCCCceEEEEEEEEeCCCC----CCcceecEEEEEEEecCCCCCcee
Q psy2920 150 D-KVAYKLAVP--SNLVVIVPQTGELLLTGD-PPSDDVEYELTVEAHDLQSP----SRYAREPAQVWLQFNSPVLQDEQL 221 (325)
Q Consensus 150 ~-~v~Y~i~~~--~~~F~i~~~tG~i~l~~~-d~e~~~~y~l~V~a~D~g~p----~~~s~~t~~v~I~v~d~~~~P~~~ 221 (325)
+ .+.|+|..+ .++|.|++.+|.|++.+. |+|....|.|+|+|+|++++ ++++ +++|+|.|.|+|++|. |
T Consensus 143 g~n~~y~i~~~~~~~~F~I~~~tG~i~~~~~ld~e~~~~y~l~V~A~D~g~~~~~~~~~~--t~~v~I~V~dndn~P~-F 219 (419)
T 3ubh_A 143 DHNIHYFIVRDRTGGRFEVDERSGVVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQS--TPEERLSIVGGKRAPQ-F 219 (419)
T ss_dssp TCCEEEEEEEESSSSCEEECTTTCEEEECSSSCCCBTCEEEEEEEEEEEEEEC--CCEEE--CCCEEEEEEESCCCCE-E
T ss_pred CceeEEEEEeCCCCCeEEEeCCceEEEEecccccccccEEEEEEEEEECCCCccCccccc--ceEEEEEEECCCCCCc-e
Confidence 5 599999863 479999999999999888 88888999999999998864 3444 7778888888666665 5
Q ss_pred eeccccCCCCccceeeeeEeeccCC---ceEEEEEeCCCCccceEEEEEEe-CCcccceEeeCCCCceEeCCCeeEEEce
Q psy2920 222 LQMIDRKSEAPHRIEKRRVTRAVRP---TKRIDFSETDGEMEGRIVFALEK-ETEREKFKIRDENPWITVDENGDVRVKK 297 (325)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~v~~~~~~---~~~v~a~d~D~~~~~~i~y~i~~-~~~~~~F~i~~~~~~f~i~~tG~i~~~~ 297 (325)
.+. .|...+.|+.++ +..+.|+|.| ++.++|+|.. ++..+.|.|++ .+|.|++.+
T Consensus 220 ~~~----------~y~~~v~En~~~gt~v~~v~A~D~d---n~~i~Ysi~~~~~~~~~F~I~~--------~tG~i~~~~ 278 (419)
T 3ubh_A 220 YMP----------SYEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKAQGQGAGTFNIGP--------TSGIVKLAK 278 (419)
T ss_dssp SSS----------CEEEEEETTCCTTCEEEECCEECSS---CCCCEEEEEESSSCCSSEEECT--------TTCEEEECS
T ss_pred ecC----------eeEEEecCCCCCCcEEEEEEEecCC---CCceEEEEecCCCCCCcEEEEC--------CCCEEEECc
Confidence 443 233456666554 4567788775 6789999984 56667788876 699999999
Q ss_pred eCccccCCCCceEEEEEEEecC
Q psy2920 298 RWDFEELGPEKTIDFWVTINNQ 319 (325)
Q Consensus 298 ~lD~E~~~~~~~~~l~V~a~D~ 319 (325)
+||||.......|.|.|.|+|.
T Consensus 279 ~LD~E~~~~~~~y~l~V~a~dd 300 (419)
T 3ubh_A 279 ELDFEDLRQPHVYSLIVTATED 300 (419)
T ss_dssp CCCTTCTTSCSEEEEEEEEECT
T ss_pred ccCccccccccEEEEEEEEEeC
Confidence 9999987211379999999964
No 13
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=9e-38 Score=271.78 Aligned_cols=190 Identities=23% Similarity=0.306 Sum_probs=165.8
Q ss_pred CCCC--CCCceEEeeEEEecCCCCCCCceEEEEEeeCCCCceEEEeCCCCccccccccCCcceEEEecccCCcccccEEE
Q psy2920 1 MENS--KSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYS 78 (325)
Q Consensus 1 ~En~--~~Gt~v~~~~a~d~D~~~~~~~~i~y~i~~~~~~~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~~~~~ 78 (325)
+||. |.|+.|+++ |+|+|.+ ++.++|+|.+++....|+|++.+| .|.+.++||||....|.
T Consensus 11 ~En~~~p~~~~v~~v-a~D~D~g---n~~i~Y~l~~~~~~~~F~Id~~tG-------------~i~~~~~LDrE~~~~y~ 73 (215)
T 2a4e_A 11 IEEYTGPDPVLVGRL-HSDIDSG---DGNIKYILSGEGAGTIFVIDDKSG-------------NIHATKTLDREERAQYT 73 (215)
T ss_dssp ETTCCSSSCEEEEEC-CCTTCCS---SSCEEEEEEETTBTTTEEECTTTC-------------EEEECSCCCTTTCSEEE
T ss_pred eccCCCCCCEEEEEE-EECCCCC---CCeEEEEEECCCCCCeEEEECCce-------------EEEECCccCCccCCEEE
Confidence 4773 679999988 6788775 488999999875556899999999 89999999999999999
Q ss_pred EEEEEEeCCC-CC-eeEEEEEEEEecCCCCCCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCC------C
Q psy2920 79 LVITATDVKG-IN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG------D 150 (325)
Q Consensus 79 l~v~a~D~~~-~~-~~~~~v~v~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~------~ 150 (325)
|+|.|+|.++ ++ ++.+.|.|+|+|+|||+|.|.+..|.+.|+|+.++| +.|++|.|+|+|. +
T Consensus 74 l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~G----------t~v~~v~A~D~D~~~~G~n~ 143 (215)
T 2a4e_A 74 LMAQAVDRDTNRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVG----------TSVIQVTASDADDPTYGNSA 143 (215)
T ss_dssp EEEEEEETTTCCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTT----------CEEEECCEECSSCTTTCSSS
T ss_pred EEEEEEECCCCCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCC----------CEEEEEEEEECCCCCCCCce
Confidence 9999999875 33 678999999999999999999999999999999999 9999999999995 3
Q ss_pred eEEEEEecCCCcEEEeCCceEEEEc-cC-CCCCCceEEEEEEEEeCCCC--CCcceecEEEEEEEecCCCCCc
Q psy2920 151 KVAYKLAVPSNLVVIVPQTGELLLT-GD-PPSDDVEYELTVEAHDLQSP--SRYAREPAQVWLQFNSPVLQDE 219 (325)
Q Consensus 151 ~v~Y~i~~~~~~F~i~~~tG~i~l~-~~-d~e~~~~y~l~V~a~D~g~p--~~~s~~t~~v~I~v~d~~~~P~ 219 (325)
+++|+|.++..+|+|++.+|.|++. +. |||....|.|.|+|+|+|.| ++++ +++|+|+|.|+|++||
T Consensus 144 ~i~Y~i~~~~~~F~Id~~tG~I~~~~~~LD~E~~~~y~l~V~A~D~g~~~~~~s~--~~~v~I~V~DvNDn~P 214 (215)
T 2a4e_A 144 KLVYSILEGQPYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKDMGGHMGGLSG--TTKVTITLTDDYKDDD 214 (215)
T ss_dssp CCEEEEEESTTTEEECTTTCEEEECSSCCCSSSCSEEEEEEEEETTTTCTTCCEE--EEEEEEEEEC------
T ss_pred EEEEEEeCCCCcEEEeCCccEEEEcccCCCcccCCEEEEEEEEEECCCCCCCcee--EEEEEEEEEECCCCCC
Confidence 7999999988899999999999998 66 99999999999999999986 4555 8999999999888777
No 14
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=100.00 E-value=1.4e-37 Score=269.94 Aligned_cols=186 Identities=22% Similarity=0.287 Sum_probs=171.3
Q ss_pred CCCCCCCceEEeeEEEecCCCCCCCceEEEEEeeCCCCceEEEeCCCCccccccccCCcceEEEecccCCcccccEEEEE
Q psy2920 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLV 80 (325)
Q Consensus 1 ~En~~~Gt~v~~~~a~d~D~~~~~~~~i~y~i~~~~~~~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~~~~~l~ 80 (325)
+|++++|+.|+++.|+|+|. +.+.|+|.+++..+.|.|++.+| .|.+.++||||....|.|.
T Consensus 20 ~E~~~~Gt~v~~v~A~D~D~-----~~~~y~i~~~~~~~~F~Id~~tG-------------~i~~~~~LD~E~~~~y~l~ 81 (210)
T 3mvs_A 20 SEDTPVGSSVTQLLARDMDN-----DPLVFGVSGEEASRFFAVEPDTG-------------VVWLRQPLDRETKSEFTVE 81 (210)
T ss_dssp ETTCCTTCEEEECCEECTTC-----CCCEEEEESHHHHHHEEECTTTC-------------EEEESSCCCTTTCCEEEEE
T ss_pred eCCCCCCCEEEEEEEEeCCC-----CcEEEEEeCCCCCCcEEEeCCCC-------------EEEECCccCCcccceEEEE
Confidence 59999999999999999984 45899998765557899999999 9999999999999999999
Q ss_pred EEEEeCCCCCeeEEEEEEEEecCCCCCCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCC---CeEEEEEe
Q psy2920 81 ITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLA 157 (325)
Q Consensus 81 v~a~D~~~~~~~~~~v~v~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~---~~v~Y~i~ 157 (325)
|.|+|.++ .+++.+.|.|+|+|||+|+|....|.+.|+|+.++| +.|+++.|+|+|. +.+.|+|.
T Consensus 82 v~a~D~~~--~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g----------t~v~~v~A~D~D~g~n~~v~Y~i~ 149 (210)
T 3mvs_A 82 FSVSDHQG--VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVG----------TPIFIVNATDPDLGAGGSVLYSFQ 149 (210)
T ss_dssp EEEECSSC--EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTT----------CEEEECCEECCSSGGGGCEEEEES
T ss_pred EEEEeCCC--CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCC----------CEEEEEEEEeCCCCCCceEEEEEe
Confidence 99999865 457789999999999999999999999999999999 9999999999996 58999999
Q ss_pred cCCCcEEEeCCceEEEEccC-CCCCCceEEEEEEEEeCCC-CCCcceecEEEEEEEecCCCCC
Q psy2920 158 VPSNLVVIVPQTGELLLTGD-PPSDDVEYELTVEAHDLQS-PSRYAREPAQVWLQFNSPVLQD 218 (325)
Q Consensus 158 ~~~~~F~i~~~tG~i~l~~~-d~e~~~~y~l~V~a~D~g~-p~~~s~~t~~v~I~v~d~~~~P 218 (325)
.+.++|.|++.+|.|++.+. |||....|.|+|+|+|+|+ |++++ +++|+|.|.|+|++|
T Consensus 150 ~~~~~F~Id~~tG~i~~~~~LD~E~~~~y~l~V~a~D~g~~~~~s~--~~~v~I~V~DvND~~ 210 (210)
T 3mvs_A 150 PPSPFFAIDSARGIVTVIQELDYEVTQAYQLTVNATDQDKTRPLST--LANLAIIITDMQDMD 210 (210)
T ss_dssp SCCSSEEECTTTCEEEECSCCCTTTCSEEEEEEEEEECCSSSCCEE--EEEEEEEEECCCCCC
T ss_pred CCCCCEEEeCCcEEEEECCcCCCcccceEEEEEEEEECCCCCCCEE--EEEEEEEEEccCCCC
Confidence 88899999999999999999 9999999999999999985 67777 899999999998876
No 15
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.4e-39 Score=283.63 Aligned_cols=196 Identities=13% Similarity=0.023 Sum_probs=169.8
Q ss_pred CCCCCCCceEEeeEEEecCCCCCCCceEE------EEEeeCCCCceEEEeCCCCccccccccCCcceEEEecccCCcccc
Q psy2920 1 MENSKSGTGVKGLPILVASSHKHPHQLVR------YSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74 (325)
Q Consensus 1 ~En~~~Gt~v~~~~a~d~D~~~~~~~~i~------y~i~~~~~~~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~ 74 (325)
+|++++|+.|+++.|+|+|.+...+..|. |+|..+ ....|.|++.+| .|++.++||||..
T Consensus 13 ~E~~~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~-~~~~F~Id~~tG-------------~i~~~~~LDrE~~ 78 (246)
T 2x2u_A 13 YVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLH-ENNWIRIQEDTG-------------LLYLQRSLDHSSW 78 (246)
T ss_dssp ETTBCTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEE-ECCSEEECTTTC-------------EEEESSCBCHHHH
T ss_pred eCCCCCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCC-CCCEEEECCCcE-------------EEEECCcCChhHh
Confidence 69999999999999999998765456665 666654 346899999999 9999999999999
Q ss_pred cEE------------EEEEEEEeCCCC--C-eeEEEEEEEEecCCCCCCc----------cCcceeEEEEeccCCCCCCC
Q psy2920 75 AQY------------SLVITATDVKGI--N-KAETHVTVDVLDENDNSPV----------FSQKVYRFIVGDLKSSLNSN 129 (325)
Q Consensus 75 ~~~------------~l~v~a~D~~~~--~-~~~~~v~v~V~DvNdn~P~----------f~~~~~~~~v~E~~~~g~~~ 129 (325)
..| .|+|.|+|.+++ . ++++.|.|+|+|+|||+|+ |.+..|.+.|+|+.++|
T Consensus 79 ~~y~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~~y~~~v~En~~~G--- 155 (246)
T 2x2u_A 79 EKLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELCFPETRPSFRIRENRPPG--- 155 (246)
T ss_dssp HHHHHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHHSCSSCCCEEEEBTSCCC---
T ss_pred hhhccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccccccCCCcEEEEEECCCCCC---
Confidence 999 999999999876 2 6788999999999999999 99999999999999999
Q ss_pred cccccceeEEEEEEEEeCCC---CeEEEEEecC-CCcEEEeCCceEEEEccC-CCCCCceEEEEEEEEe-CCCCCCccee
Q psy2920 130 VSHWKKFSSIGSVSATDADG---DKVAYKLAVP-SNLVVIVPQTGELLLTGD-PPSDDVEYELTVEAHD-LQSPSRYARE 203 (325)
Q Consensus 130 ~~~~~~~~~v~~v~A~D~D~---~~v~Y~i~~~-~~~F~i~~~tG~i~l~~~-d~e~~~~y~l~V~a~D-~g~p~~~s~~ 203 (325)
+.|++|.|+|+|. ++++|+|.++ ..+|+|++.+|.|++.+. |||....|.|+|+|+| .|+|++++
T Consensus 156 -------t~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~V~A~d~dg~p~~ss-- 226 (246)
T 2x2u_A 156 -------TFHQFRLLPVQFLCPQISVAYRLLEGEGLPFRSAPDSLEVSTRWALDREQREKYELVAVCTVHAGAREEVV-- 226 (246)
T ss_dssp -------EEEECSCHHHHHHCTTSCEEEEEESCTTSSEECCTTCCEEEESSCBCTTTCSEEEEEEEEEEC---CCEEE--
T ss_pred -------cEEEEEEEEcCCCCCCcEEEEEEccCCCCCEEEECCcCEEEeCCccCccccceEEEEEEEEecCCCCcceE--
Confidence 9999999999996 5899999987 589999999999999999 9999999999999998 55688877
Q ss_pred cEEEEEEEecCCCCCceee
Q psy2920 204 PAQVWLQFNSPVLQDEQLL 222 (325)
Q Consensus 204 t~~v~I~v~d~~~~P~~~~ 222 (325)
+++|+|+|.|+|++||.|.
T Consensus 227 ~~~v~I~V~DvNDn~P~F~ 245 (246)
T 2x2u_A 227 MVPFPVTVYDEDDSAPEFE 245 (246)
T ss_dssp EEEEEEEEECSSCCSCCCC
T ss_pred EEEEEEEEEEeCCCCCccC
Confidence 8999999999887777564
No 16
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=2.3e-36 Score=263.00 Aligned_cols=185 Identities=24% Similarity=0.361 Sum_probs=166.4
Q ss_pred CCCCCCCceEEeeEEEecCCCCCCCceEEEEEeeCC----CCceEEEeCCCCccccccccCCcceEEEecccCCcccccE
Q psy2920 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGN----DNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQ 76 (325)
Q Consensus 1 ~En~~~Gt~v~~~~a~d~D~~~~~~~~i~y~i~~~~----~~~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~~~ 76 (325)
|||++ |+.++.+.+.|.|.+. |+.++|+|.+++ +...|.|++.+| .|.+.++||||....
T Consensus 10 ~En~~-g~~~~~v~~~~~D~~~--n~~v~Ysi~~~~~~~~~~~~F~Id~~tG-------------~i~~~~~LDrE~~~~ 73 (215)
T 2qvi_A 10 PENSR-GPFPQELVRIRSDRDK--NLSLRYSVTGPGADQPPTGIFIINPISG-------------QLSVTKPLDRELIAR 73 (215)
T ss_dssp ESSCC-CCSSEEEEECCCGGGG--TSCEEEEEESTTSSSTTCSSEEECTTTC-------------EEEECSCCCTTTCSE
T ss_pred cCCCC-CCCCEEEEEEeCCCCC--CceEEEEEECCCCCCCCCCcEEEeCCcc-------------EEEECcccCcccCCe
Confidence 69999 9888888888887765 599999999754 246899999999 899999999999999
Q ss_pred EEEEEEEEeCCCCC-eeEEEEEEEEecCCCCCCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCC-----C
Q psy2920 77 YSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG-----D 150 (325)
Q Consensus 77 ~~l~v~a~D~~~~~-~~~~~v~v~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~-----~ 150 (325)
|.|+|.|+|.++++ ++.+.|.|+|+|+|||+|+|....|.+.|+|+.++| +.|++|.|+|+|. +
T Consensus 74 y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~g----------t~v~~v~A~D~D~~~g~n~ 143 (215)
T 2qvi_A 74 FHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPG----------TYVMTVTAIDADDPNALNG 143 (215)
T ss_dssp EEEEEEEEETTTCCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTT----------CEEEECCCBCSSCTTSTTT
T ss_pred EEEEEEEEECCCCceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCC----------CEEEEEEEEeCCCCCCCCc
Confidence 99999999998876 688999999999999999999999999999999999 9999999999996 4
Q ss_pred eEEEEEecC------CCcEEEeCCceEEEEc-cC-CCCCCceEEEEEEEEeCCCC---CCcceecEEEEEEEec
Q psy2920 151 KVAYKLAVP------SNLVVIVPQTGELLLT-GD-PPSDDVEYELTVEAHDLQSP---SRYAREPAQVWLQFNS 213 (325)
Q Consensus 151 ~v~Y~i~~~------~~~F~i~~~tG~i~l~-~~-d~e~~~~y~l~V~a~D~g~p---~~~s~~t~~v~I~v~d 213 (325)
+++|+|.++ .++|.|++.+|.|++. +. |||....|.|.|+|+|+|+| ++++ +++|+|+|.|
T Consensus 144 ~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~a~D~g~~p~~~ls~--t~~v~I~V~D 215 (215)
T 2qvi_A 144 MLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSN--TATAVITVTD 215 (215)
T ss_dssp CCCCEEEECSSCCSSTTCEEECTTTCEEEECSCCCCTTTCSEEEEEEECCTTTTCTTTSCCC--EEEEEEEECC
T ss_pred EEEEEEecCCCCCCcCCeEEEcCCCcEEEEecCCCCcccCCeEEEEEEEEECCCCCCCCcce--EEEEEEEEEC
Confidence 899999975 3689999999999996 55 99999999999999999887 6777 8889998865
No 17
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=100.00 E-value=1.7e-35 Score=255.37 Aligned_cols=181 Identities=23% Similarity=0.332 Sum_probs=163.6
Q ss_pred CCCCCCC--ceEEeeEEEecCCCCCCCceEEEEEeeCCCCceEEEeCCCCccccccccCCcceEEEecccCCcccccEEE
Q psy2920 1 MENSKSG--TGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYS 78 (325)
Q Consensus 1 ~En~~~G--t~v~~~~a~d~D~~~~~~~~i~y~i~~~~~~~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~~~~~ 78 (325)
+||.+.| +.|+++. .|.|.+. . +|+|.+++....|.|++.+| .|.+.++||||....|.
T Consensus 10 ~En~~~~~~~~v~~v~-~D~D~g~---~--~Y~i~~~~~~~~F~Id~~tG-------------~i~~~~~LDrE~~~~y~ 70 (203)
T 3ppe_A 10 REEIDSPLPHHVGKLT-SSVGNKN---A--MYIIEGESANTIFKVQGYDG-------------DIYAFERLDREKKAEYE 70 (203)
T ss_dssp ETTCCSSSCEEEEECC-BCCCCTT---E--EEEEEETTBTTTEEEETTTT-------------EEEESSCCCTTTCCEEE
T ss_pred EccCCCCCCEEEEEEE-ecCCCCC---c--EEEEecCCCCCeEEEECCcC-------------EEEECccccccccceEE
Confidence 5999988 8888887 6666543 2 99999887777999999999 99999999999999999
Q ss_pred EEEEEEeCCCC--CeeEEEEEEEEecCCCCCCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCC------C
Q psy2920 79 LVITATDVKGI--NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG------D 150 (325)
Q Consensus 79 l~v~a~D~~~~--~~~~~~v~v~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~------~ 150 (325)
|+|.|+|.+++ .++.+.|.|.|+|+|||+|.|....|.+.|+|+.++| +.|++|.|+|+|. +
T Consensus 71 l~v~a~D~g~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~g----------t~v~~v~A~D~D~~~~g~n~ 140 (203)
T 3ppe_A 71 LTAHIIDRRNNRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLG----------TSVTKVTAEDADDPTVAGHA 140 (203)
T ss_dssp EEEEEEETTTTEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTT----------CEEEECCEECCSCTTSSSTT
T ss_pred EEEEEEECCCCCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCC----------cEEEEEEEEcCCCcCCCCce
Confidence 99999999876 3678899999999999999999999999999999999 9999999999993 5
Q ss_pred eEEEEEecCCCcEEEeCCceEEEEc-cC-CCCCCceEEEEEEEEeC-CCCCCcceecEEEEEEEec
Q psy2920 151 KVAYKLAVPSNLVVIVPQTGELLLT-GD-PPSDDVEYELTVEAHDL-QSPSRYAREPAQVWLQFNS 213 (325)
Q Consensus 151 ~v~Y~i~~~~~~F~i~~~tG~i~l~-~~-d~e~~~~y~l~V~a~D~-g~p~~~s~~t~~v~I~v~d 213 (325)
++.|+|.++.++|.|+ .+|.|++. +. |||....|.|.|+|+|+ |.|++++ +++|+|+|.|
T Consensus 141 ~i~Y~i~~~~~~F~I~-~tG~i~~~~~~LD~E~~~~y~l~V~A~D~~G~p~~s~--t~~v~I~V~D 203 (203)
T 3ppe_A 141 TVTYQIIKGNEYFTVD-DSGVIFTARADLDRESQSAYEIIVKAKDALGLTGESS--TATVIIRLTD 203 (203)
T ss_dssp CEEEEEEESTTTEEEC-TTSEEEESCSCCCTTTCSEEEEEEEEEETTCCCCSSS--EEEEEEEEEC
T ss_pred EEEEEEeCCCCcEEEe-CCeEEEECCcCCCcccCCEEEEEEEEEeCCCCCCCeE--EEEEEEEEEC
Confidence 8999999988899999 99999998 77 99999999999999998 6678887 8888888865
No 18
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=100.00 E-value=1.2e-35 Score=258.26 Aligned_cols=183 Identities=28% Similarity=0.352 Sum_probs=163.6
Q ss_pred CCCCC--CCceEEeeEEEecCCCCCCCceEEEEEeeCCC----CceEEEeCCCCccccccccCCcceEEEecccCCcccc
Q psy2920 1 MENSK--SGTGVKGLPILVASSHKHPHQLVRYSITQGND----NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74 (325)
Q Consensus 1 ~En~~--~Gt~v~~~~a~d~D~~~~~~~~i~y~i~~~~~----~~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~ 74 (325)
+||++ .|+.|+++.| |.|. ++.++|+|.+.+. .+.|.|++.+| .|.+.++||||..
T Consensus 10 ~En~~~~~~~~v~~v~a-D~d~----n~~v~Ysi~~~~~~~~~~~~F~Id~~tG-------------~i~~~~~LDrE~~ 71 (213)
T 3qrb_A 10 PENEKGEFPKNLVQIKS-NRDK----ETKVFYSITGQGADKPPVGVFIIERETG-------------WLKVTQPLDREAI 71 (213)
T ss_dssp ETTCCSSSSEEEEECCC-GGGG----TSCEEEEEESBTTTBSSTTSEEECTTTC-------------EEEECSCCCTTTC
T ss_pred eCCCCCCCCcEEEEEEE-CCCC----CceEEEEEEcCCCCCCCCCeEEEECCCC-------------EEEECCccCcccC
Confidence 58988 6788999887 5554 4889999998433 35899999999 9999999999999
Q ss_pred cEEEEEEEEEeCCCCC-eeEEEEEEEEecCCCCCCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCCC---
Q psy2920 75 AQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD--- 150 (325)
Q Consensus 75 ~~~~l~v~a~D~~~~~-~~~~~v~v~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~~--- 150 (325)
..|.|+|.|+|.++++ ++.+.|.|+|+|+|||+|.|....|.+.|+|+.++| +.|++|+|+|+|.+
T Consensus 72 ~~y~l~v~a~D~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~g----------t~v~~v~A~D~D~~~~~ 141 (213)
T 3qrb_A 72 AKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPG----------TSVMKVSATDADDDVNT 141 (213)
T ss_dssp SEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTT----------CEEEECCEECCSCTTTS
T ss_pred ceEEEEEEEEeCCCCcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCC----------cEEEEEEEEeCCCCCCC
Confidence 9999999999998865 678999999999999999999999999999999999 99999999999964
Q ss_pred ---eEEEEEecC------CCcEEEeCCceEEEEc-cC-CCCCCceEEEEEEEEeCCCCCCcceecEEEEEEEec
Q psy2920 151 ---KVAYKLAVP------SNLVVIVPQTGELLLT-GD-PPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNS 213 (325)
Q Consensus 151 ---~v~Y~i~~~------~~~F~i~~~tG~i~l~-~~-d~e~~~~y~l~V~a~D~g~p~~~s~~t~~v~I~v~d 213 (325)
.+.|+|.++ .++|+|++.+|.|++. +. |||....|.|.|+|+|+|.|++++ +++|+|+|.|
T Consensus 142 ~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~--t~~v~I~V~D 213 (213)
T 3qrb_A 142 YNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPTYTLVVQAADLQGEGLST--TAKAVITVKD 213 (213)
T ss_dssp STTCCEEEEEEEESCCSCSCSEEECTTTCEEEECSSCCCTTTCCEEEEEEEEETGGGTSCEE--EEEEEEEEEC
T ss_pred cCcEEEEEEccCCCCCCcCCeEEEECCCcEEEEccCCCCCccCceEEEEEEEEeCCCCCceE--EEEEEEEEEC
Confidence 799999863 3689999999999997 55 999999999999999999998888 8888888875
No 19
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=100.00 E-value=4.2e-36 Score=260.03 Aligned_cols=184 Identities=21% Similarity=0.308 Sum_probs=158.5
Q ss_pred CCCCCCC--ceEEeeEEEecCCCCCCCceEEEEEeeCCCCceEEEeCCCCccccccccCCcceEEEecccCCcccccEEE
Q psy2920 1 MENSKSG--TGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYS 78 (325)
Q Consensus 1 ~En~~~G--t~v~~~~a~d~D~~~~~~~~i~y~i~~~~~~~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~~~~~ 78 (325)
+||.++| +.|+++ |+|+|.+ ++.+.|+|.+++....|.|++.+| .|.+.++||||....|.
T Consensus 10 ~En~~~~~~~~v~~~-a~D~D~g---~~~i~Y~l~~~~~~~~F~Id~~tG-------------~i~~~~~LDrE~~~~y~ 72 (207)
T 3lnd_A 10 LEEYTGSDYQYVGKL-HSDQDRG---DGSLKYILSGDGAGDLFIINENTG-------------DIQATKRLDREEKPVYI 72 (207)
T ss_dssp ESCBCSSSCEEEEEC-CCTTCCS---STTBCCCCCSSSBTTTEEECTTTC-------------EEEECSCCCGGGCCEEE
T ss_pred EeecCCCCCEEEEEE-EeCCCCC---CceEEEEEECCCCCCeEEEECCce-------------EEEECCCcCcccCCEEE
Confidence 5888855 588888 8888876 267999999776557899999999 99999999999999999
Q ss_pred EEEEEEeCCC-CC-eeEEEEEEEEecCCCCCCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCC------C
Q psy2920 79 LVITATDVKG-IN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG------D 150 (325)
Q Consensus 79 l~v~a~D~~~-~~-~~~~~v~v~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~------~ 150 (325)
|+|.|+|.++ ++ ++++.|.|.|+|+|||+|.|.+..|.+.|+|+.++| +.|++|.|+|+|. +
T Consensus 73 l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~g----------t~v~~v~A~D~D~~~~g~n~ 142 (207)
T 3lnd_A 73 LRAQAVNRRTGRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVG----------TFVVQVTATDADDPTYGNSA 142 (207)
T ss_dssp C----CBSSSCCCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTT----------CEEEECCEECSSCTTSSSTT
T ss_pred EEEEEEECCCCCccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCC----------CEEEEEEEEeCCCCCCCCCc
Confidence 9999999874 33 678889999999999999999999999999999999 9999999999995 3
Q ss_pred eEEEEEecCCCcEEEeCCceEEEEc-cC-CCCCCceEEEEEEEEeCCCC--CCcceecEEEEEEEec
Q psy2920 151 KVAYKLAVPSNLVVIVPQTGELLLT-GD-PPSDDVEYELTVEAHDLQSP--SRYAREPAQVWLQFNS 213 (325)
Q Consensus 151 ~v~Y~i~~~~~~F~i~~~tG~i~l~-~~-d~e~~~~y~l~V~a~D~g~p--~~~s~~t~~v~I~v~d 213 (325)
++.|+|.++.++|+|++.+|.|++. +. |||....|.|.|+|+|+|.| ++++ +++|+|+|.|
T Consensus 143 ~i~Y~i~~~~~~F~Id~~tG~i~~~~~~lD~E~~~~y~l~V~A~D~g~~~~~~s~--t~~v~I~V~D 207 (207)
T 3lnd_A 143 KVVYSILQGQPYFSVESETGIIKTALLNMDRENREQYQVVIQAKDMGGQMGGLSG--TTTVNITLTD 207 (207)
T ss_dssp CCEEEEEESGGGEEECTTTCEEEECCSSCCC--CCEEEEEEEEESGGGCTTCBEE--EEEEEEEEEC
T ss_pred EEEEEEcCCCCCEEEcCCCcEEEECcccCCcccCCEEEEEEEEEECCCCCCCcEe--EEEEEEEEeC
Confidence 7999999988899999999999998 66 99999999999999999987 5666 8889888875
No 20
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=100.00 E-value=3.1e-35 Score=256.57 Aligned_cols=182 Identities=23% Similarity=0.333 Sum_probs=161.5
Q ss_pred CCCCCCC--ceEEeeEEEecCCCCCCCceEEEEEeeCC----CCceEEEeCCCCccccccccCCcceEEEecccCCcccc
Q psy2920 1 MENSKSG--TGVKGLPILVASSHKHPHQLVRYSITQGN----DNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74 (325)
Q Consensus 1 ~En~~~G--t~v~~~~a~d~D~~~~~~~~i~y~i~~~~----~~~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~ 74 (325)
+||+++| +.|+++.+.|.|. .++|+|.+.+ +.+.|.|++.+| .|.+.++||||..
T Consensus 11 ~En~~~g~~~~v~~v~a~D~d~------~i~Y~i~~~~~~~~~~~~F~Id~~tG-------------~i~~~~~LDrE~~ 71 (218)
T 3k5r_A 11 PENQRQPFPRDVGKVVDSDRPE------GSKFRLTGKGVDQDPKGTFRINENTG-------------SVSVTRTLDRETI 71 (218)
T ss_dssp ETTCCSSCCEEEEECBCTTCCT------TCEEEEEEBTTTBSSTTSEEECTTTC-------------EEEECSCCCTTTC
T ss_pred ecCCCCCCCEEEEEEEecCCCc------eEEEEEEcCCCCCCCCCeEEEeCCce-------------EEEECCcCCcccC
Confidence 6999998 8888888775543 5899998643 347999999999 9999999999999
Q ss_pred cEEEEEEEEEeCCCCC-eeEEEEEEEEecCCCCCCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCC----
Q psy2920 75 AQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---- 149 (325)
Q Consensus 75 ~~~~l~v~a~D~~~~~-~~~~~v~v~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~---- 149 (325)
..|.|+|.|+|.+++. ++++.|.|+|+|+|||+|.|....|.+.|+|+.++| +.|++|.|+|+|.
T Consensus 72 ~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~g----------t~v~~v~A~D~D~~~g~ 141 (218)
T 3k5r_A 72 ATYQLYVETTDASGKTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTG----------TTVMRMTAFDADDPATD 141 (218)
T ss_dssp SEEEEEEEEECSSSCEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTT----------CEEEECCCSCSSSSCGG
T ss_pred CEEEEEEEEEECCCCceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCC----------CEEEEEEEEeCCCCCCC
Confidence 9999999999988775 688999999999999999999999999999999999 9999999999997
Q ss_pred -CeEEEEEecCC------CcEEEeCCceEEEEcc---C-CCCC--CceEEEEEEEEeCC--CCCCcceecEEEEEEEec
Q psy2920 150 -DKVAYKLAVPS------NLVVIVPQTGELLLTG---D-PPSD--DVEYELTVEAHDLQ--SPSRYAREPAQVWLQFNS 213 (325)
Q Consensus 150 -~~v~Y~i~~~~------~~F~i~~~tG~i~l~~---~-d~e~--~~~y~l~V~a~D~g--~p~~~s~~t~~v~I~v~d 213 (325)
++++|+|.++. ++|.|++.+|.|++.. . |||. ...|.|.|+|+|+| .|++++ +++|+|+|.|
T Consensus 142 n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~~~LD~E~~~~~~y~l~V~a~D~gg~~p~~ss--t~~v~I~V~D 218 (218)
T 3k5r_A 142 NALLRYNIRQQTPDKPSPNMFYIDPEKGDIVTVVSPALLDRETLENPKYELIIEAQDMAGLDVGLTG--TATATIVIDD 218 (218)
T ss_dssp GGCEEEEEEEEESCCSCSCSEEECTTTCEEEECSCGGGCCGGGCSCSEEEEEEEEEECSSTTTTCEE--EEEEEEEEEC
T ss_pred CcEEEEEEecCCCCCCcCCEEEEECCccEEEEeccCCCCCccccCCCeEEEEEEEEECCCCCCCeeE--EEEEEEEEEC
Confidence 58999998632 6799999999999873 4 9999 67999999999999 778887 8888888865
No 21
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=1.6e-33 Score=259.09 Aligned_cols=187 Identities=17% Similarity=0.188 Sum_probs=164.7
Q ss_pred CCCCCCCceEEeeEEEecCCCCCCCceEEEEEeeCCCCceEEEeCCCCccccccccCCcceEEEecccCCcccccEEEEE
Q psy2920 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLV 80 (325)
Q Consensus 1 ~En~~~Gt~v~~~~a~d~D~~~~~~~~i~y~i~~~~~~~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~~~~~l~ 80 (325)
+||+++|+.|+++.|+|+|.+.+ +.|+|..++..+.|.|++.+| .|.+.++||||....|.|.
T Consensus 118 ~En~~~gt~v~~v~A~D~D~g~n----i~Y~i~~~~~~~~F~Id~~tG-------------~i~~~~~lD~e~~~~y~l~ 180 (316)
T 3ubf_A 118 QLNAPPNTPVFTLQARDPDTDHN----IHYFIVRDRTGGRFEVDERSG-------------VVRTRGTDLFQLDMEYVLY 180 (316)
T ss_dssp CTTCCTTCEEEECCEECSSTTCC----EEEEEEEEESSSCEEECTTTC-------------EEEECSSCCCCTTCEEEEE
T ss_pred eCCCCCCCEEEEEEEECCCCCCc----eEEEEEeCCCCCEEEEECCcc-------------EEEECCcCCcccCcEEEEE
Confidence 69999999999999999998753 999999766668999999999 9999999999999999999
Q ss_pred EEEEeCCCC-----CeeEEEEEEEEecCCCCCCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCCCeEEEE
Q psy2920 81 ITATDVKGI-----NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYK 155 (325)
Q Consensus 81 v~a~D~~~~-----~~~~~~v~v~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~~~v~Y~ 155 (325)
|.|+|++++ .++++.++|.|.| |||+|+|....|.+.|+|+.++| +.|++|.|+|+|.+.++|+
T Consensus 181 V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y~~~v~En~~~g----------t~v~~v~A~D~Dn~~i~Y~ 249 (316)
T 3ubf_A 181 VKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKD----------SDIISIKAKSFADREIRYT 249 (316)
T ss_dssp EEEEESCC-------CBCCCEEEEEEE-SCCCCEESSSSEEEEEETTCCTT----------CEEEECCEECTTCCCEEEE
T ss_pred EEEEeCCCCCCCccccceEEEEEEEEc-CCCCCEEcCCCceEEEeCCCCCC----------CEEEEEEEEeCCCCEEEEE
Confidence 999999763 2577889999999 99999999999999999999999 9999999999999999999
Q ss_pred Ee-c--CCCcEEEeCCceEEEEccC-CCCCC---ceEEEEEEEEeCCCCCCcceecEEEEEEEecCCCCC
Q psy2920 156 LA-V--PSNLVVIVPQTGELLLTGD-PPSDD---VEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQD 218 (325)
Q Consensus 156 i~-~--~~~~F~i~~~tG~i~l~~~-d~e~~---~~y~l~V~a~D~g~p~~~s~~t~~v~I~v~d~~~~P 218 (325)
|. . ..++|.|++.+|.|++.+. |||.. ..|.|.|+|+|.++ ++++ +++|+|+|.|+|++|
T Consensus 250 i~~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~~~~y~l~V~A~dd~g-~~~~--~~~v~I~V~DvNDn~ 316 (316)
T 3ubf_A 250 LKAQGQGAGTFNIGPTSGIVKLAKELDFEDLRQPHVYSLIVTATEDSG-GFST--SVDLTIRVTDVNDNA 316 (316)
T ss_dssp EEEESSCTTTEEECTTTCEEEECSCCCSSCTTSCSEEEEEEEEEESSS-SCEE--EEEEEEEEECC----
T ss_pred EEcCCCCCCeEEEECCeEEEEECCcCCccccCCCceEEEEEEEEECCC-CCEE--EEEEEEEEEecCCCC
Confidence 97 2 4579999999999999999 99987 78999999995333 3555 899999999988875
No 22
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=1.6e-33 Score=259.30 Aligned_cols=187 Identities=29% Similarity=0.397 Sum_probs=165.7
Q ss_pred CCCCCCCceEEeeEEEecCCCC-CCCceEEEEEeeCCCCceEEEeCCCCccccccccCCcceEEEec-ccCCcccccEEE
Q psy2920 1 MENSKSGTGVKGLPILVASSHK-HPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTS-GDIDREEVAQYS 78 (325)
Q Consensus 1 ~En~~~Gt~v~~~~a~d~D~~~-~~~~~i~y~i~~~~~~~~F~i~~~~g~~~~~~~~~~~~~~l~~~-~~LDrE~~~~~~ 78 (325)
+|++++|+.|+++.|+|+|.+. +.|+.++|+|.++. ..|.|++.+| .|.+. +.||||....|.
T Consensus 116 ~E~~~~gt~v~~v~A~D~D~~~~G~n~~i~Y~i~~~~--~~F~Id~~tG-------------~i~~~~~~LD~E~~~~y~ 180 (322)
T 2a62_A 116 PEMSILGTSVTNVTATDADDPVYGNSAKLVYSILEGQ--PYFSIEPETA-------------IIKTALPNMDREAKEEYL 180 (322)
T ss_dssp CSSCCTTCBCCCCCCCBCSCSSSTTSSCEEEEEEECT--TTEEECTTTC-------------CEEECSSCCCGGGCSEEE
T ss_pred eCCCCCCCEEEEEEEEeCCCCCCCccEEEEEEEccCC--CCEEEecCCC-------------EEEecccCCCcccCCeEE
Confidence 6999999999999999999753 45689999999864 5899999998 78888 899999999999
Q ss_pred EEEEEEeCCCC---CeeEEEEEEEEecCCCCCCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCC---CeE
Q psy2920 79 LVITATDVKGI---NKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKV 152 (325)
Q Consensus 79 l~v~a~D~~~~---~~~~~~v~v~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~---~~v 152 (325)
|+|.|+|.+++ .+++++|+|+|.|+|||+|+|.+..|.+.|+|+.++| +.|++|.|+|+|. +.+
T Consensus 181 l~V~a~D~g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~g----------t~v~~v~A~D~D~g~n~~i 250 (322)
T 2a62_A 181 VVIQAKDMGGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLG----------TAIGRVKANDQDIGENAQS 250 (322)
T ss_dssp EEEEEEESCSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCCSSC----------CEEEEEECCCSSCGGGTCC
T ss_pred EEEEEEECCCCCCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCCCCC----------cEEEEEEEEeCCCCCCceE
Confidence 99999999876 3688999999999999999999999999999999999 9999999999997 489
Q ss_pred EEEEecC--CCcEEEe----CCceEEEEccC-CCCCCceEEEEEEEEeCCCCCCcc-----eecEEEEEEEe
Q psy2920 153 AYKLAVP--SNLVVIV----PQTGELLLTGD-PPSDDVEYELTVEAHDLQSPSRYA-----REPAQVWLQFN 212 (325)
Q Consensus 153 ~Y~i~~~--~~~F~i~----~~tG~i~l~~~-d~e~~~~y~l~V~a~D~g~p~~~s-----~~t~~v~I~v~ 212 (325)
+|+|..+ .++|.|+ ..+|.|++.+. |||....|.|.|+|+|+|.|++.+ +++++|+|.|+
T Consensus 251 ~Y~i~~g~~~~~F~I~~d~~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~g~pp~~~~~~~~s~~~~V~I~V~ 322 (322)
T 2a62_A 251 SYDIIDGDGTALFEITSDAQAQDGVIRLRKPLDFETKKSYTLKVEAANIHIDPRFSSRGPFKDTATVKIVVE 322 (322)
T ss_dssp EEEEC---CCSSBCCBCCTTTSEEEEEBCSCCCCSSCCEEEEEEEEECCCSSCTTSSCCCCCCCCEEEEEEC
T ss_pred EEEEECCCCCCcEEEeccCCCceEEEEECCcCCcccCCeEEEEEEEEECCCCCccccCCCcccEEEEEEEEC
Confidence 9999864 5799998 46899999999 999999999999999999876431 24788888873
No 23
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.97 E-value=1.5e-30 Score=225.67 Aligned_cols=179 Identities=17% Similarity=0.270 Sum_probs=154.0
Q ss_pred CCCCccCcceeE--EEEeccCCCCCCCcccccceeEEEEEEEEeCCCCeEEEEEecC--CCcEEEeCCceEEEEccC-CC
Q psy2920 105 DNSPVFSQKVYR--FIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP--SNLVVIVPQTGELLLTGD-PP 179 (325)
Q Consensus 105 dn~P~f~~~~~~--~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~~~v~Y~i~~~--~~~F~i~~~tG~i~l~~~-d~ 179 (325)
|++|.|....|. +.|+|+.++| +.|+++.|+|+|.+.+.|+|.++ .++|.|++.+|.|++.+. ||
T Consensus 3 n~~P~F~~~~y~~~~~V~E~~~~G----------t~v~~v~A~D~D~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LD~ 72 (210)
T 3mvs_A 3 NRLPFFTNHFFDTYLLISEDTPVG----------SSVTQLLARDMDNDPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDR 72 (210)
T ss_dssp CCCCEECCGGGTSCEEEETTCCTT----------CEEEECCEECTTCCCCEEEEESHHHHHHEEECTTTCEEEESSCCCT
T ss_pred CCCCccCCCccceEEEEeCCCCCC----------CEEEEEEEEeCCCCcEEEEEeCCCCCCcEEEeCCCCEEEECCccCC
Confidence 569999999997 7999999999 99999999999999999999874 468999999999999999 99
Q ss_pred CCCceEEEEEEEEeCCCCCCcceecEEEEEEEecCCCCCceeeeccccCCCCccceeeeeEeeccCC---ceEEEEEeCC
Q psy2920 180 SDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRP---TKRIDFSETD 256 (325)
Q Consensus 180 e~~~~y~l~V~a~D~g~p~~~s~~t~~v~I~v~d~~~~P~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~v~a~d~D 256 (325)
|....|.|.|+|+|++.+ + +++|+|+|.|+|++||.|.+. .| ...+.|+.++ +.++.|+|.|
T Consensus 73 E~~~~y~l~v~a~D~~~~---~--~~~v~I~V~DvNDn~P~f~~~---~y-------~~~v~E~~~~gt~v~~v~A~D~D 137 (210)
T 3mvs_A 73 ETKSEFTVEFSVSDHQGV---I--TRKVNIQVGDVNDNAPTFHNQ---PY-------SVRIPENTPVGTPIFIVNATDPD 137 (210)
T ss_dssp TTCCEEEEEEEEECSSCE---E--EEEEEEEEECCCCCCCEECSC---SE-------EEEEETTCCTTCEEEECCEECCS
T ss_pred cccceEEEEEEEEeCCCC---E--EEEEEEEEEeCCCCCCcCCCc---eE-------EEEEECCCCCCCEEEEEEEEeCC
Confidence 999999999999998752 3 679999999988877767654 23 3455665544 5678999999
Q ss_pred CCccceEEEEEEeCCcccceEeeCCCCceEeCCCeeEEEceeCccccCCCCceEEEEEEEecCCC
Q psy2920 257 GEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQAT 321 (325)
Q Consensus 257 ~~~~~~i~y~i~~~~~~~~F~i~~~~~~f~i~~tG~i~~~~~lD~E~~~~~~~~~l~V~a~D~~~ 321 (325)
.+.++.++|+|..+. +.|.|++ .+|.|++.++||||.. ..|.|.|+|+|.|.
T Consensus 138 ~g~n~~v~Y~i~~~~--~~F~Id~--------~tG~i~~~~~LD~E~~---~~y~l~V~a~D~g~ 189 (210)
T 3mvs_A 138 LGAGGSVLYSFQPPS--PFFAIDS--------ARGIVTVIQELDYEVT---QAYQLTVNATDQDK 189 (210)
T ss_dssp SGGGGCEEEEESSCC--SSEEECT--------TTCEEEECSCCCTTTC---SEEEEEEEEEECCS
T ss_pred CCCCceEEEEEeCCC--CCEEEeC--------CcEEEEECCcCCCccc---ceEEEEEEEEECCC
Confidence 999999999997643 4677765 6999999999999999 89999999999984
No 24
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.97 E-value=1.4e-29 Score=223.64 Aligned_cols=188 Identities=20% Similarity=0.248 Sum_probs=150.7
Q ss_pred CCCCCCCceEEeeEEEecCCCCCCCceEEEEEeeCCCCceEEEeCCCCccccccccCCcceEEEe---cccCCcccccEE
Q psy2920 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVT---SGDIDREEVAQY 77 (325)
Q Consensus 1 ~En~~~Gt~v~~~~a~d~D~~~~~~~~i~y~i~~~~~~~~F~i~~~~g~~~~~~~~~~~~~~l~~---~~~LDrE~~~~~ 77 (325)
+|++++|+.|..+.+.+.+.. ++++.+.|+|.+. ....|.|++.+| .+.+ .+.||||....|
T Consensus 27 ~E~sp~GTvv~~~~~~~~~d~-~~n~~i~ysl~~~-~~~~f~id~~tg-------------~~~l~~t~~~LDrE~~~~~ 91 (242)
T 4apx_B 27 DEESRNGTILVDNMLIKGTAG-GPDPTIELSLKDN-VDYWVLLDPVKQ-------------MLFLNSTGRVLDRDPPMNI 91 (242)
T ss_dssp ETTCCTTCEEESCCCBSSCBS-SSSCSEEEEEESC-GGGCEEEETTTT-------------EEEECCTTSCCCCSTTTCC
T ss_pred eCCCCCCCEEEEEEEecCCCC-CCCCEEEEEEecC-CCceEEECCCCC-------------EEEEEecCCceeccCCCce
Confidence 599999999977655554332 3468999999865 356899999998 6665 367999988766
Q ss_pred EEE---EEEEeCCCCCeeEEEEEEEEecCCCCCCccCcceeEEEEeccCCCCCCCcccccceeEEEE-----EEEEeCCC
Q psy2920 78 SLV---ITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS-----VSATDADG 149 (325)
Q Consensus 78 ~l~---v~a~D~~~~~~~~~~v~v~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~-----v~A~D~D~ 149 (325)
.+. +.|.+......+.+.|+|.|+|+|||+|+|.+..|.+.|+|+.++| +.|.+ |.|+|+|.
T Consensus 92 ~~~~~~v~~~~~~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~G----------t~v~~~~~~~v~A~D~D~ 161 (242)
T 4apx_B 92 HSIVVQVQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVG----------TTIFTGFSGDNGATDIDD 161 (242)
T ss_dssp CEEEEEEEEEETTTCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTT----------CEEECTTTTTTSEECCSS
T ss_pred EEEEEEEEeECCCCCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCC----------CEEEEeeecccccccCCC
Confidence 544 4455543333567889999999999999999999999999999999 99976 78999998
Q ss_pred ---CeEEEEEecCC------CcEEEeC-CceEEEEccC-CCCCCceEEEEEEEEeCCCCCC-cceecEEEEEEEec
Q psy2920 150 ---DKVAYKLAVPS------NLVVIVP-QTGELLLTGD-PPSDDVEYELTVEAHDLQSPSR-YAREPAQVWLQFNS 213 (325)
Q Consensus 150 ---~~v~Y~i~~~~------~~F~i~~-~tG~i~l~~~-d~e~~~~y~l~V~a~D~g~p~~-~s~~t~~v~I~v~d 213 (325)
++|+|+|..+. ++|.|+. .+|.|++.+. |||....|.|.|+|+|+|.|+. ..+.++.|+|.|+-
T Consensus 162 g~N~~v~Ysi~~~~~~~~~~~~F~Id~~~tG~i~~~~~LD~E~~~~y~l~V~A~D~G~~~~~~~~~~~~vtVnVe~ 237 (242)
T 4apx_B 162 GPNGQIEYVIQYNPEDPTSNDTFEIPLMLTGNVVLRKRLNYEDKTRYYVIIQANDRAQNLNERRTTTTTLTVDLEH 237 (242)
T ss_dssp GGGGCEEEEEECCTTSTTHHHHEECSSTTTCCEEECSCCCTTTCCEEEEEEEEEECCSSGGGCCEEEEEEEEEEEC
T ss_pred CcCCceEEEEecCCCCcccccceEEcCCCceEEEECCcCChhhCCEEEEEEEEEECCcCchhcccCCceEEEEEee
Confidence 47999998742 3699984 5999999999 9999999999999999998752 22347788888753
No 25
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.96 E-value=7.6e-28 Score=209.10 Aligned_cols=173 Identities=15% Similarity=0.235 Sum_probs=144.4
Q ss_pred eeEEEEeccC--CCCCCCcccccceeEEEEEEEEeCCC--CeEEEEEecCC--CcEEEeCCceEEEEccC-CCCCCceEE
Q psy2920 114 VYRFIVGDLK--SSLNSNVSHWKKFSSIGSVSATDADG--DKVAYKLAVPS--NLVVIVPQTGELLLTGD-PPSDDVEYE 186 (325)
Q Consensus 114 ~~~~~v~E~~--~~g~~~~~~~~~~~~v~~v~A~D~D~--~~v~Y~i~~~~--~~F~i~~~tG~i~l~~~-d~e~~~~y~ 186 (325)
-|++.|.|+. +.| +.|+++ |+|+|. +.++|+|.++. .+|+|++.+|.|++.+. |||....|.
T Consensus 5 ~~~~~v~En~~~p~~----------~~v~~v-a~D~D~gn~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~ 73 (215)
T 2a4e_A 5 WNQFFVIEEYTGPDP----------VLVGRL-HSDIDSGDGNIKYILSGEGAGTIFVIDDKSGNIHATKTLDREERAQYT 73 (215)
T ss_dssp CCEEEEETTCCSSSC----------EEEEEC-CCTTCCSSSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEE
T ss_pred EeeEEEeccCCCCCC----------EEEEEE-EECCCCCCCeEEEEEECCCCCCeEEEECCceEEEECCccCCccCCEEE
Confidence 3678899995 345 888888 899997 58999998753 68999999999999999 999999999
Q ss_pred EEEEEEeCCC-CCCcceecEEEEEEEecCCCCCceeeeccccCCCCccceeeeeEeeccCC---ceEEEEEeCCC---Cc
Q psy2920 187 LTVEAHDLQS-PSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRP---TKRIDFSETDG---EM 259 (325)
Q Consensus 187 l~V~a~D~g~-p~~~s~~t~~v~I~v~d~~~~P~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~v~a~d~D~---~~ 259 (325)
|.|+|+|++. +++++ +++|+|+|.|+|++||.|.+. .| ...++|+.++ +.++.|+|.|. |.
T Consensus 74 l~v~a~D~~~~~~~~~--~~~v~I~V~DvNDn~P~F~~~---~y-------~~~v~E~~~~Gt~v~~v~A~D~D~~~~G~ 141 (215)
T 2a4e_A 74 LMAQAVDRDTNRPLEP--PSEFIVKVQDINDNPPEFLHE---IY-------HANVPERSNVGTSVIQVTASDADDPTYGN 141 (215)
T ss_dssp EEEEEEETTTCCEEEE--EEEEEEEEECCCCCCCEESSS---SE-------EEEEETTCCTTCEEEECCEECSSCTTTCS
T ss_pred EEEEEEECCCCCcccc--cEEEEEEEeeCCCCCCCccCC---ce-------EEEEECCCCCCCEEEEEEEEECCCCCCCC
Confidence 9999999985 56666 889999999988877767654 23 3455555554 56789999997 78
Q ss_pred cceEEEEEEeCCcccceEeeCCCCceEeCCCeeEEEc-eeCccccCCCCceEEEEEEEecCCCC
Q psy2920 260 EGRIVFALEKETEREKFKIRDENPWITVDENGDVRVK-KRWDFEELGPEKTIDFWVTINNQATN 322 (325)
Q Consensus 260 ~~~i~y~i~~~~~~~~F~i~~~~~~f~i~~tG~i~~~-~~lD~E~~~~~~~~~l~V~a~D~~~~ 322 (325)
|+.++|+|..++ ..|.|++ .+|.|++. ++||||.. ..|.|.|+|+|.|..
T Consensus 142 n~~i~Y~i~~~~--~~F~Id~--------~tG~I~~~~~~LD~E~~---~~y~l~V~A~D~g~~ 192 (215)
T 2a4e_A 142 SAKLVYSILEGQ--PYFSVEA--------QTGIIRTALPNMDREAK---EEYHVVIQAKDMGGH 192 (215)
T ss_dssp SSCCEEEEEEST--TTEEECT--------TTCEEEECSSCCCSSSC---SEEEEEEEEETTTTC
T ss_pred ceEEEEEEeCCC--CcEEEeC--------CccEEEEcccCCCcccC---CEEEEEEEEEECCCC
Confidence 899999999875 4688875 59999999 99999998 899999999999865
No 26
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=99.96 E-value=8.4e-28 Score=208.77 Aligned_cols=175 Identities=14% Similarity=0.190 Sum_probs=146.4
Q ss_pred EEEEeccCCCCCCCcccccceeEEEEEEEEeCCC-CeEEEEEecC------CCcEEEeCCceEEEEccC-CCCCCceEEE
Q psy2920 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG-DKVAYKLAVP------SNLVVIVPQTGELLLTGD-PPSDDVEYEL 187 (325)
Q Consensus 116 ~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~-~~v~Y~i~~~------~~~F~i~~~tG~i~l~~~-d~e~~~~y~l 187 (325)
.++|+|+.+.+ .|+.|+++.| |+|. +.++|+|.++ .++|.|++.+|.|++.+. |||....|.|
T Consensus 6 ~~~V~En~~~~--------~~~~v~~v~a-D~d~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l 76 (213)
T 3qrb_A 6 AISCPENEKGE--------FPKNLVQIKS-NRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYIL 76 (213)
T ss_dssp EEEEETTCCSS--------SSEEEEECCC-GGGGTSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEE
T ss_pred CEEEeCCCCCC--------CCcEEEEEEE-CCCCCceEEEEEEcCCCCCCCCCeEEEECCCCEEEECCccCcccCceEEE
Confidence 68899999832 1288999999 8887 6899999873 248999999999999999 9999999999
Q ss_pred EEEEEeCCCCCCcceecEEEEEEEecCCCCCceeeeccccCCCCccceeeeeEeeccCC---ceEEEEEeCCCC---ccc
Q psy2920 188 TVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRP---TKRIDFSETDGE---MEG 261 (325)
Q Consensus 188 ~V~a~D~g~p~~~s~~t~~v~I~v~d~~~~P~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~v~a~d~D~~---~~~ 261 (325)
.|+|+|++++++++ +++|+|+|.|+|++||.|.+. . +...+.|+.++ +.++.|+|.|.+ .|+
T Consensus 77 ~v~a~D~~~~~~~~--~~~v~I~V~DvNDn~P~F~~~---~-------y~~~v~En~~~gt~v~~v~A~D~D~~~~~~n~ 144 (213)
T 3qrb_A 77 YSHAVSSNGEAVED--PMEIVITVTDQNDNRPEFTQE---V-------FEGSVAEGAVPGTSVMKVSATDADDDVNTYNA 144 (213)
T ss_dssp EEEEEETTSCBCSC--CEEEEEEEECCSCCCCEESCS---E-------EEEEEETTCCTTCEEEECCEECCSCTTTSSTT
T ss_pred EEEEEeCCCCcccc--eEEEEEEEEEccCCCCccCCC---c-------eEEEEECCCCCCcEEEEEEEEeCCCCCCCcCc
Confidence 99999999988887 899999999988877767664 2 33456666554 567899999998 889
Q ss_pred eEEEEEEeCC----cccceEeeCCCCceEeCCCeeEEEc-eeCccccCCCCceEEEEEEEecCCCC
Q psy2920 262 RIVFALEKET----EREKFKIRDENPWITVDENGDVRVK-KRWDFEELGPEKTIDFWVTINNQATN 322 (325)
Q Consensus 262 ~i~y~i~~~~----~~~~F~i~~~~~~f~i~~tG~i~~~-~~lD~E~~~~~~~~~l~V~a~D~~~~ 322 (325)
.++|+|..++ ..+.|.|++ .+|.|++. ++||||.. ..|.|.|.|+|.|..
T Consensus 145 ~i~Y~i~~~~~~~~~~~~F~Id~--------~tG~i~~~~~~LD~E~~---~~y~l~V~A~D~g~~ 199 (213)
T 3qrb_A 145 AIAYTIVSQDPELPHKNMFTVNR--------DTGVISVLTSGLDRESY---PTYTLVVQAADLQGE 199 (213)
T ss_dssp CCEEEEEEEESCCSCSCSEEECT--------TTCEEEECSSCCCTTTC---CEEEEEEEEETGGGT
T ss_pred EEEEEEccCCCCCCcCCeEEEEC--------CCcEEEEccCCCCCccC---ceEEEEEEEEeCCCC
Confidence 9999998875 335687765 59999997 89999999 899999999998743
No 27
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.96 E-value=1.1e-29 Score=225.12 Aligned_cols=177 Identities=14% Similarity=0.050 Sum_probs=144.7
Q ss_pred ccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCCC-eEEEEEe----------c-CCCcEEEeCCceEEEEcc
Q psy2920 109 VFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD-KVAYKLA----------V-PSNLVVIVPQTGELLLTG 176 (325)
Q Consensus 109 ~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~~-~v~Y~i~----------~-~~~~F~i~~~tG~i~l~~ 176 (325)
.|.+..|.+.|+|+.++| +.|++|+|+|+|.+ .+.|+|. . ..++|+|++.+|.|++.+
T Consensus 2 ~F~~~~Y~~~V~E~~~~G----------t~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~~~~~F~Id~~tG~i~~~~ 71 (246)
T 2x2u_A 2 YFSRDAYWEKLYVDQAAG----------TPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWIRIQEDTGLLYLQR 71 (246)
T ss_dssp EESCSEEEEEEETTBCTT----------CEEEECCEECSSTTCCCCCEECSEEECGGGCEEEECCSEEECTTTCEEEESS
T ss_pred CccCCceEEEeeCCCCCC----------CEEEEEEEEcCCCCCcceEEEeeccccceeccCCCCCEEEECCCcEEEEECC
Confidence 588999999999999999 99999999999985 3555554 2 357999999999999999
Q ss_pred C-CCCCCceE------------EEEEEEEeCCCC--CCcceecEEEEEEEecCCCCCce----------eeeccccCCCC
Q psy2920 177 D-PPSDDVEY------------ELTVEAHDLQSP--SRYAREPAQVWLQFNSPVLQDEQ----------LLQMIDRKSEA 231 (325)
Q Consensus 177 ~-d~e~~~~y------------~l~V~a~D~g~p--~~~s~~t~~v~I~v~d~~~~P~~----------~~~~~~~~~~~ 231 (325)
. |||....| .|+|.|+|+|.| ++++ +++|.|+|.|+|+++|. |.+. .|.+
T Consensus 72 ~LDrE~~~~y~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~--~~~v~I~V~DvNDn~P~~~~~~~~~~~F~~~---~y~~ 146 (246)
T 2x2u_A 72 SLDHSSWEKLSVRNRGFPLLTVYLKVFLSPTSLREGECQW--PGCARVYFSFFNTSFPACSSLKPRELCFPET---RPSF 146 (246)
T ss_dssp CBCHHHHHHHHHTSTTSCCCEEEEEEECC-------CCCT--TTEEEEEEEEESSCCCCGGGCCHHHHHSCSS---CCCE
T ss_pred cCChhHhhhhccccCCCcccceEEEEEEEcCCCCCCcccc--eEEEEEEEEECCCCCCccccccccccccCCC---cEEE
Confidence 9 99999999 999999999987 5666 88999999998887776 5443 3444
Q ss_pred ccceeeeeEeeccCC---ceEEEEEeCCCCccceEEEEEEeCCcccceEeeCCCCceEeCCCeeEEEceeCccccCCCCc
Q psy2920 232 PHRIEKRRVTRAVRP---TKRIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEELGPEK 308 (325)
Q Consensus 232 ~~~~~~~~v~~~~~~---~~~v~a~d~D~~~~~~i~y~i~~~~~~~~F~i~~~~~~f~i~~tG~i~~~~~lD~E~~~~~~ 308 (325)
.+.|+.++ +.++.|+|.|.+.|+.++|+|..++ .+.|.|++ .+|.|++.++||||.. .
T Consensus 147 -------~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~-~~~F~Id~--------~tG~i~~~~~LDrE~~---~ 207 (246)
T 2x2u_A 147 -------RIRENRPPGTFHQFRLLPVQFLCPQISVAYRLLEGE-GLPFRSAP--------DSLEVSTRWALDREQR---E 207 (246)
T ss_dssp -------EEEBTSCCCEEEECSCHHHHHHCTTSCEEEEEESCT-TSSEECCT--------TCCEEEESSCBCTTTC---S
T ss_pred -------EEECCCCCCcEEEEEEEEcCCCCCCcEEEEEEccCC-CCCEEEEC--------CcCEEEeCCccCcccc---c
Confidence 45555544 4567899999999999999999876 56688876 6999999999999999 8
Q ss_pred eEEEEEEEecC
Q psy2920 309 TIDFWVTINNQ 319 (325)
Q Consensus 309 ~~~l~V~a~D~ 319 (325)
.|.|+|.|+|.
T Consensus 208 ~y~l~V~A~d~ 218 (246)
T 2x2u_A 208 KYELVAVCTVH 218 (246)
T ss_dssp EEEEEEEEEEC
T ss_pred eEEEEEEEEec
Confidence 99999999983
No 28
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=99.96 E-value=8e-28 Score=209.08 Aligned_cols=173 Identities=14% Similarity=0.233 Sum_probs=145.3
Q ss_pred EEEEeccCCCCCCCcccccceeEEEEEEEEeCCC---CeEEEEEecC------CCcEEEeCCceEEEEccC-CCCCCceE
Q psy2920 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP------SNLVVIVPQTGELLLTGD-PPSDDVEY 185 (325)
Q Consensus 116 ~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~---~~v~Y~i~~~------~~~F~i~~~tG~i~l~~~-d~e~~~~y 185 (325)
.++|+|+.+ | +.++++.|.|.|. +.++|+|.++ .++|+|++.+|.|++.+. |||....|
T Consensus 6 ~~~V~En~~-g----------~~~~~v~~~~~D~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y 74 (215)
T 2qvi_A 6 PINLPENSR-G----------PFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIARF 74 (215)
T ss_dssp CEEEESSCC-C----------CSSEEEEECCCGGGGTSCEEEEEESTTSSSTTCSSEEECTTTCEEEECSCCCTTTCSEE
T ss_pred cEEEcCCCC-C----------CCCEEEEEEeCCCCCCceEEEEEECCCCCCCCCCcEEEeCCccEEEECcccCcccCCeE
Confidence 578999998 7 7778888888886 5899999974 368999999999999999 99999999
Q ss_pred EEEEEEEeCCCCCCcceecEEEEEEEecCCCCCceeeeccccCCCCccceeeeeEeeccCC---ceEEEEEeCCC--Ccc
Q psy2920 186 ELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRP---TKRIDFSETDG--EME 260 (325)
Q Consensus 186 ~l~V~a~D~g~p~~~s~~t~~v~I~v~d~~~~P~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~v~a~d~D~--~~~ 260 (325)
.|.|+|+|++.|++++ +++|+|+|.|+|++||.|.+. .|...+.|+.++ +.++.|+|.|. +.|
T Consensus 75 ~l~v~a~D~g~~~~~~--~~~v~I~V~DvNDn~P~F~~~----------~y~~~v~En~~~gt~v~~v~A~D~D~~~g~n 142 (215)
T 2qvi_A 75 HLRAHAVDINGNQVEN--PIDIVINVIDMNDNRPEFLHQ----------VWNGSVPEGSKPGTYVMTVTAIDADDPNALN 142 (215)
T ss_dssp EEEEEEEETTTCCCEE--EEEEEEEEECCCCCCCBCSSS----------EEEEEECSSCCTTCEEEECCCBCSSCTTSTT
T ss_pred EEEEEEEECCCCceee--eEEEEEEEeECCCCCCcccCc----------eeEEEEeCCCCCCCEEEEEEEEeCCCCCCCC
Confidence 9999999999998877 899999999988777766653 233455555544 56789999998 789
Q ss_pred ceEEEEEEeCC----cccceEeeCCCCceEeCCCeeEEEc-eeCccccCCCCceEEEEEEEecCCCC
Q psy2920 261 GRIVFALEKET----EREKFKIRDENPWITVDENGDVRVK-KRWDFEELGPEKTIDFWVTINNQATN 322 (325)
Q Consensus 261 ~~i~y~i~~~~----~~~~F~i~~~~~~f~i~~tG~i~~~-~~lD~E~~~~~~~~~l~V~a~D~~~~ 322 (325)
+.++|+|..++ ..+.|.|++ .+|.|++. ++||||.. ..|.|.|.|+|.|..
T Consensus 143 ~~i~Y~i~~~~~~~~~~~~F~Id~--------~tG~i~~~~~~LD~E~~---~~y~l~V~a~D~g~~ 198 (215)
T 2qvi_A 143 GMLRYRILSQAPSTPSPNMFTINN--------ETGDIITVAAGLDREKV---QQYTLIIQATDMEGN 198 (215)
T ss_dssp TCCCCEEEECSSCCSSTTCEEECT--------TTCEEEECSCCCCTTTC---SEEEEEEECCTTTTC
T ss_pred cEEEEEEecCCCCCCcCCeEEEcC--------CCcEEEEecCCCCcccC---CeEEEEEEEEECCCC
Confidence 99999999986 456788765 59999996 79999998 899999999999754
No 29
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.95 E-value=2.9e-27 Score=206.06 Aligned_cols=173 Identities=15% Similarity=0.158 Sum_probs=144.9
Q ss_pred EEEEeccCCCCCCCcccccceeEEEEEEEEeCCCCeEEEEEecC------CCcEEEeCCceEEEEccC-CCCCCceEEEE
Q psy2920 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP------SNLVVIVPQTGELLLTGD-PPSDDVEYELT 188 (325)
Q Consensus 116 ~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~~~v~Y~i~~~------~~~F~i~~~tG~i~l~~~-d~e~~~~y~l~ 188 (325)
.++|+|+.++|. ++.++++.|.|+|. .++|+|.++ .++|.|++.+|.|++.+. |||....|.|.
T Consensus 7 ~~~V~En~~~g~--------~~~v~~v~a~D~d~-~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~ 77 (218)
T 3k5r_A 7 PILIPENQRQPF--------PRDVGKVVDSDRPE-GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQLY 77 (218)
T ss_dssp CEEEETTCCSSC--------CEEEEECBCTTCCT-TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEEEE
T ss_pred cEEEecCCCCCC--------CEEEEEEEecCCCc-eEEEEEEcCCCCCCCCCeEEEeCCceEEEECCcCCcccCCEEEEE
Confidence 578999998761 17889999999987 899999752 379999999999999999 99999999999
Q ss_pred EEEEeCCCCCCcceecEEEEEEEecCCCCCceeeeccccCCCCccceeeeeEeeccCC---ceEEEEEeCCC--CccceE
Q psy2920 189 VEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRP---TKRIDFSETDG--EMEGRI 263 (325)
Q Consensus 189 V~a~D~g~p~~~s~~t~~v~I~v~d~~~~P~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~v~a~d~D~--~~~~~i 263 (325)
|+|+|++.|++++ +++|+|+|.|+|++||.|.+. . |...+.|+.++ +.++.|+|.|. +.|+.+
T Consensus 78 v~a~D~g~~~~~~--~~~v~I~V~DvNDn~P~F~~~---~-------y~~~v~E~~~~gt~v~~v~A~D~D~~~g~n~~i 145 (218)
T 3k5r_A 78 VETTDASGKTLEG--PVPLEVIVIDQNDNRPIFREG---P-------YIGHVMEGSPTGTTVMRMTAFDADDPATDNALL 145 (218)
T ss_dssp EEEECSSSCEEEE--EEEEEEEEECTTCCCCCCCSC---S-------EEEEEETTCCTTCEEEECCCSCSSSSCGGGGCE
T ss_pred EEEEECCCCceee--eEEEEEEEEeCCCCCCcccCC---c-------eEEEEECCCCCCCEEEEEEEEeCCCCCCCCcEE
Confidence 9999999988877 899999999988777766553 2 33456666554 56789999998 789999
Q ss_pred EEEEEeCCcc----cceEeeCCCCceEeCCCeeEEEc---eeCcccc--CCCCceEEEEEEEecCC
Q psy2920 264 VFALEKETER----EKFKIRDENPWITVDENGDVRVK---KRWDFEE--LGPEKTIDFWVTINNQA 320 (325)
Q Consensus 264 ~y~i~~~~~~----~~F~i~~~~~~f~i~~tG~i~~~---~~lD~E~--~~~~~~~~l~V~a~D~~ 320 (325)
+|+|..++.. +.|.|++ .+|.|++. +.||||. . ..|.|.|+|+|.|
T Consensus 146 ~Y~i~~~~~~~~~~~~F~Id~--------~tG~i~~~~~~~~LD~E~~~~---~~y~l~V~a~D~g 200 (218)
T 3k5r_A 146 RYNIRQQTPDKPSPNMFYIDP--------EKGDIVTVVSPALLDRETLEN---PKYELIIEAQDMA 200 (218)
T ss_dssp EEEEEEEESCCSCSCSEEECT--------TTCEEEECSCGGGCCGGGCSC---SEEEEEEEEEECS
T ss_pred EEEEecCCCCCCcCCEEEEEC--------CccEEEEeccCCCCCccccCC---CeEEEEEEEEECC
Confidence 9999987643 5687765 69999987 6999999 5 6999999999998
No 30
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.95 E-value=1.4e-27 Score=206.50 Aligned_cols=173 Identities=13% Similarity=0.220 Sum_probs=137.7
Q ss_pred EEEEeccCCCCCCCcccccceeEEEEEEEEeCCC--CeEEEEEecCC--CcEEEeCCceEEEEccC-CCCCCceEEEEEE
Q psy2920 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG--DKVAYKLAVPS--NLVVIVPQTGELLLTGD-PPSDDVEYELTVE 190 (325)
Q Consensus 116 ~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~--~~v~Y~i~~~~--~~F~i~~~tG~i~l~~~-d~e~~~~y~l~V~ 190 (325)
.+.|.|+.+++ .++.|+++ |+|+|. +.+.|+|.++. ++|.|++.+|.|++.+. |||....|.|.|+
T Consensus 6 ~~~v~En~~~~--------~~~~v~~~-a~D~D~g~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~ 76 (207)
T 3lnd_A 6 QFFLLEEYTGS--------DYQYVGKL-HSDQDRGDGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPVYILRAQ 76 (207)
T ss_dssp CEEEESCBCSS--------SCEEEEEC-CCTTCCSSTTBCCCCCSSSBTTTEEECTTTCEEEECSCCCGGGCCEEEC---
T ss_pred ccEEEeecCCC--------CCEEEEEE-EeCCCCCCceEEEEEECCCCCCeEEEECCceEEEECCCcCcccCCEEEEEEE
Confidence 46789998865 11688888 899996 57999998743 58999999999999999 9999999999999
Q ss_pred EEeCC-CCCCcceecEEEEEEEecCCCCCceeeeccccCCCCccceeeeeEeeccCC---ceEEEEEeCCC---CccceE
Q psy2920 191 AHDLQ-SPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRP---TKRIDFSETDG---EMEGRI 263 (325)
Q Consensus 191 a~D~g-~p~~~s~~t~~v~I~v~d~~~~P~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~v~a~d~D~---~~~~~i 263 (325)
|+|++ .+++++ +++|+|+|.|+|++||.|.+. .| ...+.|+.++ +.++.|+|.|. +.|+.+
T Consensus 77 a~D~~~~~~~~~--~~~v~I~V~DvNDn~P~F~~~---~y-------~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i 144 (207)
T 3lnd_A 77 AVNRRTGRPVEP--ESEFIIKIHDINDNEPIFTKD---VY-------TATVPEMADVGTFVVQVTATDADDPTYGNSAKV 144 (207)
T ss_dssp -CBSSSCCCCSC--CCCCEEEEECCSCCCCEESCS---EE-------EEEEESSCCTTCEEEECCEECSSCTTSSSTTCC
T ss_pred EEECCCCCcccc--EEEEEEEECccCCCCCccCCC---ce-------EEEEeCCCCCCCEEEEEEEEeCCCCCCCCCcEE
Confidence 99998 467777 788999999988777767654 23 3455665554 56789999997 788999
Q ss_pred EEEEEeCCcccceEeeCCCCceEeCCCeeEEEc-eeCccccCCCCceEEEEEEEecCCCC
Q psy2920 264 VFALEKETEREKFKIRDENPWITVDENGDVRVK-KRWDFEELGPEKTIDFWVTINNQATN 322 (325)
Q Consensus 264 ~y~i~~~~~~~~F~i~~~~~~f~i~~tG~i~~~-~~lD~E~~~~~~~~~l~V~a~D~~~~ 322 (325)
+|+|..++ ..|.|++ .+|.|++. ++||||.. ..|.|.|+|+|.|..
T Consensus 145 ~Y~i~~~~--~~F~Id~--------~tG~i~~~~~~lD~E~~---~~y~l~V~A~D~g~~ 191 (207)
T 3lnd_A 145 VYSILQGQ--PYFSVES--------ETGIIKTALLNMDRENR---EQYQVVIQAKDMGGQ 191 (207)
T ss_dssp EEEEEESG--GGEEECT--------TTCEEEECCSSCCC--C---CEEEEEEEEESGGGC
T ss_pred EEEEcCCC--CCEEEcC--------CCcEEEECcccCCcccC---CEEEEEEEEEECCCC
Confidence 99999875 3788876 69999999 99999998 899999999999854
No 31
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.95 E-value=6.3e-26 Score=195.42 Aligned_cols=171 Identities=14% Similarity=0.197 Sum_probs=142.1
Q ss_pred eEEEEeccCCCCCCCcccccceeEEEEEEEEeCCCCeEEEEEecC--CCcEEEeCCceEEEEccC-CCCCCceEEEEEEE
Q psy2920 115 YRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP--SNLVVIVPQTGELLLTGD-PPSDDVEYELTVEA 191 (325)
Q Consensus 115 ~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~~~v~Y~i~~~--~~~F~i~~~tG~i~l~~~-d~e~~~~y~l~V~a 191 (325)
.++.|+|+.+.|.. ..|+++. +|+|.+..+|+|.++ .++|+|++.+|.|++.+. |||....|.|+|+|
T Consensus 5 ~~~~V~En~~~~~~--------~~v~~v~-~D~D~g~~~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~v~a 75 (203)
T 3ppe_A 5 NRMHIREEIDSPLP--------HHVGKLT-SSVGNKNAMYIIEGESANTIFKVQGYDGDIYAFERLDREKKAEYELTAHI 75 (203)
T ss_dssp SEEEEETTCCSSSC--------EEEEECC-BCCCCTTEEEEEEETTBTTTEEEETTTTEEEESSCCCTTTCCEEEEEEEE
T ss_pred ccEEEEccCCCCCC--------EEEEEEE-ecCCCCCcEEEEecCCCCCeEEEECCcCEEEECccccccccceEEEEEEE
Confidence 45889999886511 7788888 999987559999975 358999999999999998 99999999999999
Q ss_pred EeCCCC-CCcceecEEEEEEEecCCCCCceeeeccccCCCCccceeeeeEeeccCC---ceEEEEEeCC---CCccceEE
Q psy2920 192 HDLQSP-SRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRP---TKRIDFSETD---GEMEGRIV 264 (325)
Q Consensus 192 ~D~g~p-~~~s~~t~~v~I~v~d~~~~P~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~v~a~d~D---~~~~~~i~ 264 (325)
+|++.| ++++ +++|+|+|.|+|++||.|.+. . +...+.|+.++ +.++.|+|.| .+.|+.++
T Consensus 76 ~D~g~~~~~~~--~~~v~I~V~DvNDn~P~F~~~---~-------y~~~v~E~~~~gt~v~~v~A~D~D~~~~g~n~~i~ 143 (203)
T 3ppe_A 76 IDRRNNRSLEP--PSKFIIKVSDINDNAPIFVQK---I-------FNGSVPEMSRLGTSVTKVTAEDADDPTVAGHATVT 143 (203)
T ss_dssp EETTTTEECSC--CEEEEEEEECCCCCCCEESCS---E-------EEEEEETTCCTTCEEEECCEECCSCTTSSSTTCEE
T ss_pred EECCCCCcccc--eEEEEEEEcCCCCCCCCccCC---c-------cEEEEeccCCCCcEEEEEEEEcCCCcCCCCceEEE
Confidence 999976 5666 889999999988877767654 2 33456666554 5678999999 47889999
Q ss_pred EEEEeCCcccceEeeCCCCceEeCCCeeEEEc-eeCccccCCCCceEEEEEEEecCC
Q psy2920 265 FALEKETEREKFKIRDENPWITVDENGDVRVK-KRWDFEELGPEKTIDFWVTINNQA 320 (325)
Q Consensus 265 y~i~~~~~~~~F~i~~~~~~f~i~~tG~i~~~-~~lD~E~~~~~~~~~l~V~a~D~~ 320 (325)
|+|..++. .|.|+ .+|.|++. ++||||.. ..|.|.|.|+|.+
T Consensus 144 Y~i~~~~~--~F~I~---------~tG~i~~~~~~LD~E~~---~~y~l~V~A~D~~ 186 (203)
T 3ppe_A 144 YQIIKGNE--YFTVD---------DSGVIFTARADLDRESQ---SAYEIIVKAKDAL 186 (203)
T ss_dssp EEEEESTT--TEEEC---------TTSEEEESCSCCCTTTC---SEEEEEEEEEETT
T ss_pred EEEeCCCC--cEEEe---------CCeEEEECCcCCCcccC---CEEEEEEEEEeCC
Confidence 99998753 56665 59999999 99999999 8999999999984
No 32
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.92 E-value=1.9e-25 Score=176.16 Aligned_cols=110 Identities=22% Similarity=0.242 Sum_probs=101.9
Q ss_pred EEEecCCCCCCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCC---CeEEEEEecCC----CcEEEeCCce
Q psy2920 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVPS----NLVVIVPQTG 170 (325)
Q Consensus 98 v~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~---~~v~Y~i~~~~----~~F~i~~~tG 170 (325)
++|+|+|||+|+|.+..|.++|+|+.++| +.|+++.|+|+|. ++++|+|.++. .+|.|++.+|
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~G----------t~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG 71 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPG----------TPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSG 71 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTT----------CEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTC
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCC----------CEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCce
Confidence 46899999999999999999999999999 9999999999997 58999999754 5899999999
Q ss_pred EEEEccC-CCCCCceEEEEEEEEeCCCCCCcceecEEEEEEEecCCCCCc
Q psy2920 171 ELLLTGD-PPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDE 219 (325)
Q Consensus 171 ~i~l~~~-d~e~~~~y~l~V~a~D~g~p~~~s~~t~~v~I~v~d~~~~P~ 219 (325)
.|++++. |||....|.|.|+|+|+|.|++++ +++|+|+|.|+|++||
T Consensus 72 ~I~~~~~LD~E~~~~y~l~V~A~D~g~p~~s~--~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 72 WLSVLHRIDREEVNQLRFTVMARDRGQPPKTD--KATVVLNIKDENDNVP 119 (119)
T ss_dssp EEEECSCCCTTTCSEEEEEEEECCSBTTBCCE--EEEEEEEEECSTTCCC
T ss_pred EEEECccCCcccCCEEEEEEEEEECCCCCcEE--EEEEEEEEEeccCCCC
Confidence 9999999 999999999999999999998877 8999999999877765
No 33
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.91 E-value=3e-23 Score=183.03 Aligned_cols=180 Identities=12% Similarity=0.101 Sum_probs=136.7
Q ss_pred ceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCC----CeEEEEEecC-CCcEEEeCCceEEEEcc---C-CCCCCc
Q psy2920 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG----DKVAYKLAVP-SNLVVIVPQTGELLLTG---D-PPSDDV 183 (325)
Q Consensus 113 ~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~----~~v~Y~i~~~-~~~F~i~~~tG~i~l~~---~-d~e~~~ 183 (325)
+.|.++|+|+.++| +.|..+.+.|.|. +.+.|+|.+. ..+|.|++.+|.+++.. . |||...
T Consensus 20 P~~~vsV~E~sp~G----------Tvv~~~~~~~~~d~~~n~~i~ysl~~~~~~~f~id~~tg~~~l~~t~~~LDrE~~~ 89 (242)
T 4apx_B 20 PATIVAIDEESRNG----------TILVDNMLIKGTAGGPDPTIELSLKDNVDYWVLLDPVKQMLFLNSTGRVLDRDPPM 89 (242)
T ss_dssp SSEEEEEETTCCTT----------CEEESCCCBSSCBSSSSCSEEEEEESCGGGCEEEETTTTEEEECCTTSCCCCSTTT
T ss_pred CeEEEEeeCCCCCC----------CEEEEEEEecCCCCCCCCEEEEEEecCCCceEEECCCCCEEEEEecCCceeccCCC
Confidence 35778999999999 9888766655553 4799999875 46899999999998853 2 899877
Q ss_pred eEEEEEEEEeCCCCCCcceecEEEEEEEecCCCCCceeeeccccCCCCccceeeeeEeeccCCceE--------EEEEeC
Q psy2920 184 EYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQMIDRKSEAPHRIEKRRVTRAVRPTKR--------IDFSET 255 (325)
Q Consensus 184 ~y~l~V~a~D~g~p~~~s~~t~~v~I~v~d~~~~P~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--------v~a~d~ 255 (325)
.|.+.+.+.+.+.+.......+.|+|.|.|+|++||.|.+. .| ...+.|+.++... +.|+|.
T Consensus 90 ~~~~~~~~v~~~~~~~~~~~~~~V~I~V~DvNDn~P~F~~~---~y-------~~~v~En~~~Gt~v~~~~~~~v~A~D~ 159 (242)
T 4apx_B 90 NIHSIVVQVQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHE---SY-------YATVNELTPVGTTIFTGFSGDNGATDI 159 (242)
T ss_dssp CCCEEEEEEEEEETTTCCEEEEEEEEEEECCCCCCCEESSS---CE-------EEEEETTCCTTCEEECTTTTTTSEECC
T ss_pred ceEEEEEEEEeECCCCCeEEEEEEEEEEEeCCCCCCcccce---ee-------eeEeeeccCCCCEEEEeeecccccccC
Confidence 66655555554433333334778999999988777767664 23 3456666655322 459999
Q ss_pred CCCccceEEEEEEeCCcc----cceEeeCCCCceEeCCCeeEEEceeCccccCCCCceEEEEEEEecCCCC
Q psy2920 256 DGEMEGRIVFALEKETER----EKFKIRDENPWITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQATN 322 (325)
Q Consensus 256 D~~~~~~i~y~i~~~~~~----~~F~i~~~~~~f~i~~tG~i~~~~~lD~E~~~~~~~~~l~V~a~D~~~~ 322 (325)
|.|.|+.|+|+|..++.. +.|.|+.. .+|.|++.++||||.. +.|.|.|+|+|+|.+
T Consensus 160 D~g~N~~v~Ysi~~~~~~~~~~~~F~Id~~-------~tG~i~~~~~LD~E~~---~~y~l~V~A~D~G~~ 220 (242)
T 4apx_B 160 DDGPNGQIEYVIQYNPEDPTSNDTFEIPLM-------LTGNVVLRKRLNYEDK---TRYYVIIQANDRAQN 220 (242)
T ss_dssp SSGGGGCEEEEEECCTTSTTHHHHEECSST-------TTCCEEECSCCCTTTC---CEEEEEEEEEECCSS
T ss_pred CCCcCCceEEEEecCCCCcccccceEEcCC-------CceEEEECCcCChhhC---CEEEEEEEEEECCcC
Confidence 999999999999988653 35888641 3899999999999998 899999999999865
No 34
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.90 E-value=5.9e-24 Score=166.19 Aligned_cols=104 Identities=23% Similarity=0.226 Sum_probs=95.5
Q ss_pred EEEecCCCCCCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCC---CeEEEEEec-----CCCcEEEeCCc
Q psy2920 98 VDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAV-----PSNLVVIVPQT 169 (325)
Q Consensus 98 v~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~---~~v~Y~i~~-----~~~~F~i~~~t 169 (325)
|+|+|+|||+|+|.+..|.++|+|+.++| +.|++++|+|+|. ++++|+|.+ ...+|+|++.+
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~G----------t~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~t 71 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVG----------TSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTT 71 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTT----------CEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTT
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCC----------CEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCe
Confidence 56899999999999999999999999999 9999999999997 589999986 24689999999
Q ss_pred eEEEEccC-CCCCCceEEEEEEEEeCCCCCCcceecEEEEEEEecCC
Q psy2920 170 GELLLTGD-PPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPV 215 (325)
Q Consensus 170 G~i~l~~~-d~e~~~~y~l~V~a~D~g~p~~~s~~t~~v~I~v~d~~ 215 (325)
|.|++++. |||....|.|.|+|+|+|.|+ + +++|+|+|.|+|
T Consensus 72 G~I~~~~~LD~E~~~~y~l~V~A~D~g~~~--~--~~~v~I~V~DvN 114 (114)
T 2ee0_A 72 GLITVQRSLDREETAIHKVTVLASDGSSTP--A--RATVTINVTDVN 114 (114)
T ss_dssp CEEEECSCCCTTTCSEEEEEEEEESSSSSC--E--EEEEEEEEECCC
T ss_pred eEEEECccCCcccCcEEEEEEEEEECCCCc--e--EEEEEEEEEECC
Confidence 99999998 999999999999999999876 4 789999999976
No 35
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.81 E-value=2.5e-20 Score=147.40 Aligned_cols=96 Identities=26% Similarity=0.317 Sum_probs=85.2
Q ss_pred CCCCCCCceEEeeEEEecCCCCCCCceEEEEEeeCC----CCceEEEeCCCCccccccccCCcceEEEecccCCcccccE
Q psy2920 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGN----DNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQ 76 (325)
Q Consensus 1 ~En~~~Gt~v~~~~a~d~D~~~~~~~~i~y~i~~~~----~~~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~~~ 76 (325)
.|++++|+.|+++. +|+|.+. |+.++|+|.+++ ....|.|++.+| .|.+.++||||..+.
T Consensus 22 ~e~~~~gt~v~~v~-~D~D~g~--n~~i~Y~i~~~~~~~~~~~~F~Id~~tG-------------~i~~~~~LDrE~~~~ 85 (123)
T 2yqg_A 22 GEDLSKKNPIAKIH-SDLAEER--GLKITYKYTGKGITEPPFGIFVFNKDTG-------------ELNVTSILDREETPF 85 (123)
T ss_dssp SSCCCSSCCCBCCC-CHHHHHH--TCCCEEEEEEBTTTBSSCSSEEEETTTT-------------EEEECSCCBTTTBSE
T ss_pred cCCCCCCCEEEEEE-ECCCCCC--CceEEEEEecCCCCCCcCCCEEEeCCcC-------------EEEECcccCcccCce
Confidence 47889999999999 5777654 489999999763 347899999999 999999999999999
Q ss_pred EEEEEEEEeCCCCC-eeEEEEEEEEecCCCCCCccCc
Q psy2920 77 YSLVITATDVKGIN-KAETHVTVDVLDENDNSPVFSQ 112 (325)
Q Consensus 77 ~~l~v~a~D~~~~~-~~~~~v~v~V~DvNdn~P~f~~ 112 (325)
|.|+|.|+|.++++ ++++.|.|.|+|+|||+|+|.+
T Consensus 86 y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F~~ 122 (123)
T 2yqg_A 86 FLLTGYALDARGNNVEKPLELRIKVLDINDNEPVFTQ 122 (123)
T ss_dssp EEEEEEEECTTCCEEEEEECCEEEEECTTCCCCCCCC
T ss_pred EEEEEEEEECCCCceEEEEEEEEEEEEcCCCCCEeCC
Confidence 99999999998776 6789999999999999999975
No 36
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.80 E-value=6.8e-20 Score=144.17 Aligned_cols=93 Identities=27% Similarity=0.340 Sum_probs=84.9
Q ss_pred CCCCCCCceEEeeEEEecCCCCCCCceEEEEEeeCCC--CceEEEeCCCCccccccccCCcceEEEecccCCcccccEEE
Q psy2920 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGND--NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYS 78 (325)
Q Consensus 1 ~En~~~Gt~v~~~~a~d~D~~~~~~~~i~y~i~~~~~--~~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~~~~~ 78 (325)
+||+++|+.|+++.|+|+|.+. |+.++|+|.++.. ...|.|++.+| .|++.++||||....|.
T Consensus 24 ~En~~~Gt~v~~v~A~D~D~g~--n~~i~Y~i~~~~~~~~~~F~Id~~tG-------------~I~~~~~LD~E~~~~y~ 88 (119)
T 2yst_A 24 AENSAPGTPILQLRAADLDVGV--NGQIEYVFGAATESVRRLLRLDETSG-------------WLSVLHRIDREEVNQLR 88 (119)
T ss_dssp ETTCCTTCEEEECCCCCSSSSC--CSCCCCEECSCCTTHHHHEEECTTTC-------------EEEECSCCCTTTCSEEE
T ss_pred ECCCCCCCEEEEEEEEeCCCCC--CCeEEEEEecCCCccccEEEEeCCce-------------EEEECccCCcccCCEEE
Confidence 6999999999999999999865 4999999997643 36899999999 89999999999999999
Q ss_pred EEEEEEeCCCCC-eeEEEEEEEEecCCCCCC
Q psy2920 79 LVITATDVKGIN-KAETHVTVDVLDENDNSP 108 (325)
Q Consensus 79 l~v~a~D~~~~~-~~~~~v~v~V~DvNdn~P 108 (325)
|.|.|+|.|+++ ++++.|+|.|+|+|||+|
T Consensus 89 l~V~A~D~g~p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 89 FTVMARDRGQPPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp EEEEECCSBTTBCCEEEEEEEEEECSTTCCC
T ss_pred EEEEEEECCCCCcEEEEEEEEEEEeccCCCC
Confidence 999999998876 789999999999999998
No 37
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.80 E-value=1.2e-19 Score=140.75 Aligned_cols=92 Identities=27% Similarity=0.418 Sum_probs=70.9
Q ss_pred CCCCCCCce--EEeeEEEecCCCCCCCceEEEEEeeC----CCCceEEEeCCCCccccccccCCcceEEEecccCCcccc
Q psy2920 1 MENSKSGTG--VKGLPILVASSHKHPHQLVRYSITQG----NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74 (325)
Q Consensus 1 ~En~~~Gt~--v~~~~a~d~D~~~~~~~~i~y~i~~~----~~~~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~ 74 (325)
+||+++|+. |+++ |.|.+. |+.++|+|.++ +....|.|++.+| .|.+.++||||..
T Consensus 12 ~En~~~gt~~~v~~v---d~D~g~--n~~i~Y~i~~~~~~~~~~~~F~Id~~tG-------------~i~~~~~LDrE~~ 73 (110)
T 1ncg_A 12 PENSRGPFPQELVRI---RSGRDK--NLSLRYSVTGPGADQPPTGIFIINPISG-------------QLSVTKPLDRELI 73 (110)
T ss_dssp CSSCCCCSSEEEEEC---CCGGGG--GSCCEEEEESBTTTBSSTTSEEECTTTC-------------EEEECSCCCTTTC
T ss_pred eCCCCCCCcEEEEEE---eCCCCC--CCEEEEEEeCCCCCCCcCCEEEEECCCC-------------EEEECCcCCcccC
Confidence 799999995 5444 555553 59999999974 3457899999999 9999999999999
Q ss_pred cEEEEEEEEEeCCCCC-eeEEEEEEEEecCCCCCCcc
Q psy2920 75 AQYSLVITATDVKGIN-KAETHVTVDVLDENDNSPVF 110 (325)
Q Consensus 75 ~~~~l~v~a~D~~~~~-~~~~~v~v~V~DvNdn~P~f 110 (325)
+.|.|+|.|+|.++++ ++++.|.|.|+|+|||+|+|
T Consensus 74 ~~y~l~V~A~D~g~p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 74 ARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp CEEEEEEEEECTTSCBCSCCEEEEEEEC---------
T ss_pred CeEEEEEEEEECCCCceeeEEEEEEEEEECCCCCCCC
Confidence 9999999999998766 78899999999999999998
No 38
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.77 E-value=4.2e-20 Score=146.39 Aligned_cols=99 Identities=17% Similarity=0.158 Sum_probs=85.4
Q ss_pred CCCCCCCceEEeeEEEecCCCCCCCceE---EEEEeeCCCCceEEEeCCCCccccccccCCcceEEEecccCCcccc---
Q psy2920 1 MENSKSGTGVKGLPILVASSHKHPHQLV---RYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV--- 74 (325)
Q Consensus 1 ~En~~~Gt~v~~~~a~d~D~~~~~~~~i---~y~i~~~~~~~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~--- 74 (325)
||++++|+.|+++ |.|.|.+. +.+ .|+|.+++....|.|++.+| .|.+.++||||..
T Consensus 18 ~E~~~~Gt~V~~v-a~D~d~~~---~~i~~~~Y~i~~~~~~~~F~Id~~tG-------------~i~~~~~LDRE~~c~~ 80 (125)
T 1wyj_A 18 LEETDRGSLVGNL-AKDLGLSL---RELITRGAQILSKGNKQLLQLEQKSG-------------NLLLKEKLDREELCGS 80 (125)
T ss_dssp CSSCCTTCEEEES-TTTTTCCH---HHHHHTTCEEECSSSSCSEEECSSSS-------------EEEESSCCCSTTTCTT
T ss_pred ECCCCCCCEEEEE-EecCCCCC---CceeeEEEEEecCCCCCeEEEECCcc-------------EEEECccccchhhccc
Confidence 7999999999999 77766543 344 89998876678999999999 9999999999999
Q ss_pred -cEEEEEEEEEeCCCCCeeEEEEEEEEecCCCCCCccCcceeEEE
Q psy2920 75 -AQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFI 118 (325)
Q Consensus 75 -~~~~l~v~a~D~~~~~~~~~~v~v~V~DvNdn~P~f~~~~~~~~ 118 (325)
..|.|.+.|.+. . +...++|.|+|+|+|||+|+|.++.|.++
T Consensus 81 ~~~y~l~v~a~~~-~-p~~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 81 TNPCILHFQVLLK-S-PVQFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp CSSCCBCCEEEET-T-TTEEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred CCcEEEEEEEEEC-C-CCeEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 999999999984 3 34578999999999999999999988765
No 39
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.76 E-value=3.1e-19 Score=141.14 Aligned_cols=108 Identities=18% Similarity=0.146 Sum_probs=96.6
Q ss_pred CCCCCCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCC---CeEEEEEecC------CCcEEEeCCceEEE
Q psy2920 103 ENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG---DKVAYKLAVP------SNLVVIVPQTGELL 173 (325)
Q Consensus 103 vNdn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~---~~v~Y~i~~~------~~~F~i~~~tG~i~ 173 (325)
.+.+.|.|..+.|.+.+.|+.++| +.|++|. +|+|. +.|+|+|.++ .++|.|++.+|.|+
T Consensus 5 ~~r~~p~f~~~~~~v~e~e~~~~g----------t~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~ 73 (123)
T 2yqg_A 5 SSGQKRAWITAPVALREGEDLSKK----------NPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELN 73 (123)
T ss_dssp SSCSCCSSCCCCEEEESSSCCCSS----------CCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEE
T ss_pred ccccCCccCCCCEEEEecCCCCCC----------CEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEE
Confidence 468899999999999999999998 9999999 69986 5899999864 37899999999999
Q ss_pred EccC-CCCCCceEEEEEEEEeCCCCCCcceecEEEEEEEecCCCCCceeee
Q psy2920 174 LTGD-PPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQ 223 (325)
Q Consensus 174 l~~~-d~e~~~~y~l~V~a~D~g~p~~~s~~t~~v~I~v~d~~~~P~~~~~ 223 (325)
+.+. |||....|.|+|.|+|+|.|++++ +++|.|+|.|+|++||.|.+
T Consensus 74 ~~~~LDrE~~~~y~l~V~A~D~g~p~~~~--~~~v~I~V~DvNDn~P~F~~ 122 (123)
T 2yqg_A 74 VTSILDREETPFFLLTGYALDARGNNVEK--PLELRIKVLDINDNEPVFTQ 122 (123)
T ss_dssp ECSCCBTTTBSEEEEEEEEECTTCCEEEE--EECCEEEEECTTCCCCCCCC
T ss_pred ECcccCcccCceEEEEEEEEECCCCceEE--EEEEEEEEEEcCCCCCEeCC
Confidence 9999 999999999999999999988877 88999999998887776754
No 40
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.71 E-value=1.3e-17 Score=130.03 Aligned_cols=88 Identities=32% Similarity=0.369 Sum_probs=79.1
Q ss_pred CCCCCCCceEEeeEEEecCCCCCCCceEEEEEeeC---CCCceEEEeCCCCccccccccCCcceEEEecccCCcccccEE
Q psy2920 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQG---NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQY 77 (325)
Q Consensus 1 ~En~~~Gt~v~~~~a~d~D~~~~~~~~i~y~i~~~---~~~~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~~~~ 77 (325)
+||+++|+.|+++.|+|+|.+. |+.++|+|.+. +....|.|++.+| .|++.++||||....|
T Consensus 24 ~En~~~Gt~v~~v~A~D~D~g~--n~~i~Y~i~~~~~~~~~~~F~Id~~tG-------------~I~~~~~LD~E~~~~y 88 (114)
T 2ee0_A 24 PENAPVGTSVIQLHATDADIGS--NAEIRYIFGAQVAPATKRLFALNNTTG-------------LITVQRSLDREETAIH 88 (114)
T ss_dssp ETTCCTTCEEEECCCCSCSSCC--CSCCEEEECSSCCHHHHHHEEECTTTC-------------EEEECSCCCTTTCSEE
T ss_pred ECCCCCCCEEEEEEEEeCCCCC--CcEEEEEEccCCCCCccceEEEeCCee-------------EEEECccCCcccCcEE
Confidence 6999999999999999999865 49999999863 2346899999999 8999999999999999
Q ss_pred EEEEEEEeCCCCCeeEEEEEEEEecCC
Q psy2920 78 SLVITATDVKGINKAETHVTVDVLDEN 104 (325)
Q Consensus 78 ~l~v~a~D~~~~~~~~~~v~v~V~DvN 104 (325)
.|.|.|+|.++++ ++++|.|.|+|+|
T Consensus 89 ~l~V~A~D~g~~~-~~~~v~I~V~DvN 114 (114)
T 2ee0_A 89 KVTVLASDGSSTP-ARATVTINVTDVN 114 (114)
T ss_dssp EEEEEEESSSSSC-EEEEEEEEEECCC
T ss_pred EEEEEEEECCCCc-eEEEEEEEEEECC
Confidence 9999999998765 7889999999998
No 41
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.70 E-value=3.8e-17 Score=126.54 Aligned_cols=93 Identities=12% Similarity=0.164 Sum_probs=73.3
Q ss_pred eeEEEEeccCCCCCCCccccccee--EEEEEEEEeCCC---CeEEEEEecC------CCcEEEeCCceEEEEccC-CCCC
Q psy2920 114 VYRFIVGDLKSSLNSNVSHWKKFS--SIGSVSATDADG---DKVAYKLAVP------SNLVVIVPQTGELLLTGD-PPSD 181 (325)
Q Consensus 114 ~~~~~v~E~~~~g~~~~~~~~~~~--~v~~v~A~D~D~---~~v~Y~i~~~------~~~F~i~~~tG~i~l~~~-d~e~ 181 (325)
.|.++|+|+.++| + .|+++ |.|. +.|+|+|.++ .++|.|++.+|.|++.+. |||.
T Consensus 6 ~~~~~v~En~~~g----------t~~~v~~v---d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~ 72 (110)
T 1ncg_A 6 IPPINLPENSRGP----------FPQELVRI---RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDREL 72 (110)
T ss_dssp CCCEEECSSCCCC----------SSEEEEEC---CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTT
T ss_pred eeeEEEeCCCCCC----------CcEEEEEE---eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCccc
Confidence 4679999999998 7 35555 4554 6899999862 468999999999999999 9999
Q ss_pred CceEEEEEEEEeCCCCCCcceecEEEEEEEecCCCCCcee
Q psy2920 182 DVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQL 221 (325)
Q Consensus 182 ~~~y~l~V~a~D~g~p~~~s~~t~~v~I~v~d~~~~P~~~ 221 (325)
...|.|.|+|+|+|.|++++ +++|.|+|.|+|++||.|
T Consensus 73 ~~~y~l~V~A~D~g~p~~~~--~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 73 IARFHLRAHAVDINGNQVEN--PIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp CCEEEEEEEEECTTSCBCSC--CEEEEEEEC---------
T ss_pred CCeEEEEEEEEECCCCceee--EEEEEEEEEECCCCCCCC
Confidence 99999999999999998887 899999999988777754
No 42
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.68 E-value=1.2e-16 Score=121.04 Aligned_cols=85 Identities=21% Similarity=0.288 Sum_probs=75.6
Q ss_pred CCCCC--CCceEEeeEEEecCCCCCCCceEEEEEeeCCCCceEEEeCCCCccccccccCCcceEEEecccCCcccccEEE
Q psy2920 1 MENSK--SGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYS 78 (325)
Q Consensus 1 ~En~~--~Gt~v~~~~a~d~D~~~~~~~~i~y~i~~~~~~~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~~~~~ 78 (325)
+||++ +|+.|+++. +|+|.+ |+.++|+|.+++..+.|.|++.+| .|.+.++||||..+.|.
T Consensus 11 ~En~~~~~g~~v~~v~-~D~D~g---Ng~v~Ysi~~~~~~~~F~Id~~tG-------------~i~~~~~LDrE~~~~y~ 73 (99)
T 1zvn_A 11 LEEYTGTDPLYVGKLH-SDMDRG---DGSIKYILSGEGAGIVFTIDDTTG-------------DIHAIQRLDREERSQYT 73 (99)
T ss_dssp EGGGCSSSCEEEEECC-BTTCCS---SSCEEEEEEETTBTTTEEECTTTC-------------EEEECSCCCTTTCSEEE
T ss_pred ECCCCCCCCcEEEEEE-ECCCCC---CCEEEEEEeCCCCCceEEEeCCCC-------------CEEECeecCCccCCeEE
Confidence 58876 689999999 888876 499999999876557899999999 99999999999999999
Q ss_pred EEEEEEeCC-CCC-eeEEEEEEEEec
Q psy2920 79 LVITATDVK-GIN-KAETHVTVDVLD 102 (325)
Q Consensus 79 l~v~a~D~~-~~~-~~~~~v~v~V~D 102 (325)
|+|.|+|.| +++ ++.+.|.|+|+|
T Consensus 74 l~V~A~D~G~~p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 74 LRAQALDRRTGRPMEPESEFIIKIQD 99 (99)
T ss_dssp EEEEEEETTTCCBSSCCEEEEEEEEC
T ss_pred EEEEEEECCCCCCcceeEEEEEEEeC
Confidence 999999998 465 788999999987
No 43
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.68 E-value=1e-16 Score=121.66 Aligned_cols=86 Identities=17% Similarity=0.152 Sum_probs=78.3
Q ss_pred eEEEEeccCCC--CCCCcccccceeEEEEEEEEeCCCCeEEEEEecC------CCcEEEeCCceEEEEccC-CCCCCceE
Q psy2920 115 YRFIVGDLKSS--LNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP------SNLVVIVPQTGELLLTGD-PPSDDVEY 185 (325)
Q Consensus 115 ~~~~v~E~~~~--g~~~~~~~~~~~~v~~v~A~D~D~~~v~Y~i~~~------~~~F~i~~~tG~i~l~~~-d~e~~~~y 185 (325)
+.++|+||.++ | +.|++|+|+|+|. .++|+|.+. .+.|.|++.+|.|++.+. |||....|
T Consensus 5 ~~~~V~En~~~~~g----------~~v~~v~A~D~D~-~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y 73 (99)
T 3k6d_A 5 PSISIPENQRIPFP----------KIVGRVVVSDRIP-GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIPSY 73 (99)
T ss_dssp CCEEEETTCCSCSS----------EEEEECBCSSCCT-TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEE
T ss_pred CcEEEeCCCCCCCC----------cEEEEEEEECCCC-cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccCceE
Confidence 35889999998 8 9999999999998 999999852 368999999999999999 99999999
Q ss_pred EEEEEEEeCCCCCCcceecEEEEEEEec
Q psy2920 186 ELTVEAHDLQSPSRYAREPAQVWLQFNS 213 (325)
Q Consensus 186 ~l~V~a~D~g~p~~~s~~t~~v~I~v~d 213 (325)
.|.|+|+|+|+|++++ +++|+|+|.|
T Consensus 74 ~l~V~A~D~g~~~l~~--~~~v~I~V~D 99 (99)
T 3k6d_A 74 QLQVETTDENGKTIEG--PVDLEILVID 99 (99)
T ss_dssp EEEEEEECTTCCEEEE--EEEEEEEEEC
T ss_pred EEEEEEEECCCCceee--EEEEEEEEEC
Confidence 9999999999998887 8888888875
No 44
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.67 E-value=1.9e-16 Score=120.39 Aligned_cols=85 Identities=16% Similarity=0.214 Sum_probs=77.2
Q ss_pred EEEEeccCCC--CCCCcccccceeEEEEEEEEeCCCCeEEEEEecC------CCcEEEeCCceEEEEccC-CCCCCceEE
Q psy2920 116 RFIVGDLKSS--LNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP------SNLVVIVPQTGELLLTGD-PPSDDVEYE 186 (325)
Q Consensus 116 ~~~v~E~~~~--g~~~~~~~~~~~~v~~v~A~D~D~~~v~Y~i~~~------~~~F~i~~~tG~i~l~~~-d~e~~~~y~ 186 (325)
.+.|+||.++ | +.|++|+|+|+|. .++|+|.+. .++|.|++.||.|++.+. |||....|.
T Consensus 7 ~~~V~EN~~~~~g----------~~v~~V~A~D~D~-~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~ 75 (100)
T 3k6f_A 7 PILIPENQRQPFP----------RDVGKVVDSDRPE-GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIATYQ 75 (100)
T ss_dssp CEEEETTCCSSSC----------EEEEECEETTCCT-TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSEEE
T ss_pred cEEEeCCCCCCCC----------cEEEEEEEEcCCC-CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCCCEEE
Confidence 5789999987 6 9999999999999 899999852 368999999999999999 999999999
Q ss_pred EEEEEEeCCCCCCcceecEEEEEEEec
Q psy2920 187 LTVEAHDLQSPSRYAREPAQVWLQFNS 213 (325)
Q Consensus 187 l~V~a~D~g~p~~~s~~t~~v~I~v~d 213 (325)
|.|+|+|+|.|++++ +++|+|+|.|
T Consensus 76 l~V~A~D~g~p~l~~--~~~v~I~V~D 100 (100)
T 3k6f_A 76 LYVETTDASGKTLEG--PVPLEVIVID 100 (100)
T ss_dssp EEEEEECTTCCEEEE--EEEEEEEEEC
T ss_pred EEEEEEECCCCcccc--eEEEEEEEEC
Confidence 999999999999888 8888888875
No 45
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.67 E-value=3e-16 Score=118.73 Aligned_cols=85 Identities=20% Similarity=0.265 Sum_probs=73.9
Q ss_pred CCCCC--CCceEEeeEEEecCCCCCCCceEEEEEeeCCCCceEEEeCCCCccccccccCCcceEEEecccCCcccccEEE
Q psy2920 1 MENSK--SGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYS 78 (325)
Q Consensus 1 ~En~~--~Gt~v~~~~a~d~D~~~~~~~~i~y~i~~~~~~~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~~~~~ 78 (325)
+||++ +|+.|+++. +|+|.+ |+.++|+|.+.+....|.|++.+| .|.+.++||||..+.|.
T Consensus 10 ~En~~~p~~~~v~~v~-~D~D~g---N~~v~Ysi~~~~~~~~F~Id~~tG-------------~i~~~~~LDrE~~~~y~ 72 (98)
T 1zxk_A 10 LEEFSGPEPILVGRLH-TDLDPG---SKKIKYILSGDGAGTIFQINDITG-------------DIHAIKRLDREEKAEYT 72 (98)
T ss_dssp CGGGCSSSCEEEEECC-BCCCCC-----CEEEEEEETTBTTTEEECTTTC-------------EEEECSCCCTTTCSEEE
T ss_pred ECCCCCCCCeEEEEEE-ECCCCC---CCEEEEEEeCCCCCCEEEEECCcc-------------EEEECccCCCcCCCeEE
Confidence 68985 899999997 888876 499999999865556899999999 99999999999999999
Q ss_pred EEEEEEeCCC-CC-eeEEEEEEEEec
Q psy2920 79 LVITATDVKG-IN-KAETHVTVDVLD 102 (325)
Q Consensus 79 l~v~a~D~~~-~~-~~~~~v~v~V~D 102 (325)
|+|.|+|.|. ++ ++.+.|.|.|+|
T Consensus 73 l~v~A~D~g~~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 73 LTAQAVDFETNKPLEPPSEFIIKVQD 98 (98)
T ss_dssp EEEEEEETTTCCBSSCCEEEEEEECC
T ss_pred EEEEEEECCCCCCcceeEEEEEEEEC
Confidence 9999999986 44 788999999987
No 46
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.66 E-value=4e-16 Score=118.35 Aligned_cols=83 Identities=17% Similarity=0.237 Sum_probs=74.4
Q ss_pred CCCCCC--CceEEeeEEEecCCCCCCCceEEEEEeeC----CCCceEEEeCCCCccccccccCCcceEEEecccCCcccc
Q psy2920 1 MENSKS--GTGVKGLPILVASSHKHPHQLVRYSITQG----NDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74 (325)
Q Consensus 1 ~En~~~--Gt~v~~~~a~d~D~~~~~~~~i~y~i~~~----~~~~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~ 74 (325)
+||+++ |+.|+++.|+|+|. .++|+|.+. ++.+.|.|++.+| .|.+.++||||..
T Consensus 10 ~En~~~~~g~~v~~v~A~D~D~------~i~Ysi~~~~~~~~~~~~F~Id~~tG-------------~i~~~~~LDrE~~ 70 (99)
T 3k6d_A 10 PENQRIPFPKIVGRVVVSDRIP------GSKIKLYGKGVDQEPKGIFKINENSG-------------EVSVTKALDREAI 70 (99)
T ss_dssp ETTCCSCSSEEEEECBCSSCCT------TCEEEEESBTTTBSSTTSEEECTTTC-------------EEEECSCCCTTTC
T ss_pred eCCCCCCCCcEEEEEEEECCCC------cEEEEEecCcCCCCCCCEEEEECCce-------------EEEECcCCCcccC
Confidence 699999 99999999998876 599999862 3347899999999 9999999999999
Q ss_pred cEEEEEEEEEeCCCCC-eeEEEEEEEEec
Q psy2920 75 AQYSLVITATDVKGIN-KAETHVTVDVLD 102 (325)
Q Consensus 75 ~~~~l~v~a~D~~~~~-~~~~~v~v~V~D 102 (325)
..|.|+|.|+|.|+++ ++.+.|.|+|+|
T Consensus 71 ~~y~l~V~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 71 PSYQLQVETTDENGKTIEGPVDLEILVID 99 (99)
T ss_dssp CEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred ceEEEEEEEEECCCCceeeEEEEEEEEEC
Confidence 9999999999998876 678999999987
No 47
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.64 E-value=1e-15 Score=116.08 Aligned_cols=87 Identities=17% Similarity=0.236 Sum_probs=77.1
Q ss_pred EEEEeccCCCCCCCcccccceeEEEEEEEEeCCCCeEEEEEecC------CCcEEEeCCceEEEEccC-CCCCCceEEEE
Q psy2920 116 RFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVP------SNLVVIVPQTGELLLTGD-PPSDDVEYELT 188 (325)
Q Consensus 116 ~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~~~v~Y~i~~~------~~~F~i~~~tG~i~l~~~-d~e~~~~y~l~ 188 (325)
.++|+||.++| .++.|++|.|+|+|. +|+|+|.+. .++|.|++.+|.|++.+. |||....|.|.
T Consensus 6 ~~~v~EN~~~g--------~~~~v~~V~A~D~D~-~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l~ 76 (99)
T 3k6i_A 6 PILIPENQRPP--------FPRSVGKVIRSEGTE-GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIANYELE 76 (99)
T ss_dssp CEEEETTCCSS--------SCEEEEECEETTCCS-SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEEEE
T ss_pred cEEEeCCCCCC--------CCeEEEEEEEEcCCC-eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccCCEEEEE
Confidence 37899999875 118899999999999 999999862 268999999999999999 99999999999
Q ss_pred EEEEeCCCCCCcceecEEEEEEEec
Q psy2920 189 VEAHDLQSPSRYAREPAQVWLQFNS 213 (325)
Q Consensus 189 V~a~D~g~p~~~s~~t~~v~I~v~d 213 (325)
|+|+|+|+|++++ +++|.|+|.|
T Consensus 77 v~A~D~g~~~l~~--~~~v~I~V~D 99 (99)
T 3k6i_A 77 VEVTDLSGKIIDG--PVRLDISVID 99 (99)
T ss_dssp EEEEETTSCEEEE--EEEEEEEEEC
T ss_pred EEEEECCCCceee--eEEEEEEEEC
Confidence 9999999999888 8888888875
No 48
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.64 E-value=9.9e-16 Score=116.40 Aligned_cols=83 Identities=23% Similarity=0.310 Sum_probs=74.4
Q ss_pred CCCCCC--CceEEeeEEEecCCCCCCCceEEEEEeeCC----CCceEEEeCCCCccccccccCCcceEEEecccCCcccc
Q psy2920 1 MENSKS--GTGVKGLPILVASSHKHPHQLVRYSITQGN----DNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74 (325)
Q Consensus 1 ~En~~~--Gt~v~~~~a~d~D~~~~~~~~i~y~i~~~~----~~~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~ 74 (325)
+||+++ |+.|+++.|+|+|. .++|+|.+.+ +...|.|++.+| .|.+.++||||..
T Consensus 11 ~EN~~~~~g~~v~~V~A~D~D~------~i~Ysi~~~~~~~~~~~~F~Id~~tG-------------~i~~~~~LDrE~~ 71 (100)
T 3k6f_A 11 PENQRQPFPRDVGKVVDSDRPE------GSKFRLTGKGVDQDPKGTFRINENTG-------------SVSVTRTLDRETI 71 (100)
T ss_dssp ETTCCSSSCEEEEECEETTCCT------TCEEEEEEBTTTBSSTTSEEECTTTC-------------EEEECSCCCTTTC
T ss_pred eCCCCCCCCcEEEEEEEEcCCC------CEEEEEeCCCCCCCcCCEEEEECCCC-------------EEEECcccCCcCC
Confidence 699998 89999999999987 3899998642 347899999999 9999999999999
Q ss_pred cEEEEEEEEEeCCCCC-eeEEEEEEEEec
Q psy2920 75 AQYSLVITATDVKGIN-KAETHVTVDVLD 102 (325)
Q Consensus 75 ~~~~l~v~a~D~~~~~-~~~~~v~v~V~D 102 (325)
..|.|+|.|+|.|+++ ++.++|.|.|+|
T Consensus 72 ~~y~l~V~A~D~g~p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 72 ATYQLYVETTDASGKTLEGPVPLEVIVID 100 (100)
T ss_dssp SEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred CEEEEEEEEEECCCCcccceEEEEEEEEC
Confidence 9999999999998876 688999999987
No 49
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.64 E-value=1.3e-15 Score=115.56 Aligned_cols=83 Identities=18% Similarity=0.306 Sum_probs=74.4
Q ss_pred CCCCCCC--ceEEeeEEEecCCCCCCCceEEEEEeeCC----CCceEEEeCCCCccccccccCCcceEEEecccCCcccc
Q psy2920 1 MENSKSG--TGVKGLPILVASSHKHPHQLVRYSITQGN----DNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74 (325)
Q Consensus 1 ~En~~~G--t~v~~~~a~d~D~~~~~~~~i~y~i~~~~----~~~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~ 74 (325)
+||+++| +.|+++.|+|+|. .++|+|.+.+ +.+.|.|++.+| .|.+.++||||..
T Consensus 10 ~EN~~~g~~~~v~~V~A~D~D~------~i~Ysi~~~~~~~~~~~~F~Id~~tG-------------~i~~~~~LDrE~~ 70 (99)
T 3k6i_A 10 PENQRPPFPRSVGKVIRSEGTE------GAKFRLSGKGVDQDPKGIFRINEISG-------------DVSVTRPLDREAI 70 (99)
T ss_dssp ETTCCSSSCEEEEECEETTCCS------SEEEEEESBTTTBSSTTSEEECTTTC-------------EEEECSCCCTTTC
T ss_pred eCCCCCCCCeEEEEEEEEcCCC------eEEEEEeCCCCCCCcCCEEEEECCCc-------------EEEECcccCCccC
Confidence 6999997 9999999999987 5999998632 347899999999 9999999999999
Q ss_pred cEEEEEEEEEeCCCCC-eeEEEEEEEEec
Q psy2920 75 AQYSLVITATDVKGIN-KAETHVTVDVLD 102 (325)
Q Consensus 75 ~~~~l~v~a~D~~~~~-~~~~~v~v~V~D 102 (325)
..|.|+|.|+|.|+++ ++.++|.|.|+|
T Consensus 71 ~~y~l~v~A~D~g~~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 71 ANYELEVEVTDLSGKIIDGPVRLDISVID 99 (99)
T ss_dssp CEEEEEEEEEETTSCEEEEEEEEEEEEEC
T ss_pred CEEEEEEEEEECCCCceeeeEEEEEEEEC
Confidence 9999999999998876 788999999987
No 50
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.63 E-value=3e-15 Score=113.40 Aligned_cols=86 Identities=16% Similarity=0.246 Sum_probs=76.3
Q ss_pred eEEEEeccCC--CCCCCcccccceeEEEEEEEEeCCC--CeEEEEEecCC--CcEEEeCCceEEEEccC-CCCCCceEEE
Q psy2920 115 YRFIVGDLKS--SLNSNVSHWKKFSSIGSVSATDADG--DKVAYKLAVPS--NLVVIVPQTGELLLTGD-PPSDDVEYEL 187 (325)
Q Consensus 115 ~~~~v~E~~~--~g~~~~~~~~~~~~v~~v~A~D~D~--~~v~Y~i~~~~--~~F~i~~~tG~i~l~~~-d~e~~~~y~l 187 (325)
+.++|+|+.+ .| +.|++|+ +|+|. ++|.|+|.++. ++|.|++.+|.|++.+. |||....|.|
T Consensus 6 ~~~~v~En~~~~~g----------~~v~~v~-~D~D~gNg~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l 74 (99)
T 1zvn_A 6 NQFFVLEEYTGTDP----------LYVGKLH-SDMDRGDGSIKYILSGEGAGIVFTIDDTTGDIHAIQRLDREERSQYTL 74 (99)
T ss_dssp CEEEEEGGGCSSSC----------EEEEECC-BTTCCSSSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEE
T ss_pred cEEEEECCCCCCCC----------cEEEEEE-ECCCCCCCEEEEEEeCCCCCceEEEeCCCCCEEECeecCCccCCeEEE
Confidence 5688999976 45 8999999 99997 68999998743 58999999999999999 9999999999
Q ss_pred EEEEEeCC-CCCCcceecEEEEEEEec
Q psy2920 188 TVEAHDLQ-SPSRYAREPAQVWLQFNS 213 (325)
Q Consensus 188 ~V~a~D~g-~p~~~s~~t~~v~I~v~d 213 (325)
+|+|+|+| +|++++ +++|.|+|.|
T Consensus 75 ~V~A~D~G~~p~l~~--~~~v~I~V~D 99 (99)
T 1zvn_A 75 RAQALDRRTGRPMEP--ESEFIIKIQD 99 (99)
T ss_dssp EEEEEETTTCCBSSC--CEEEEEEEEC
T ss_pred EEEEEECCCCCCcce--eEEEEEEEeC
Confidence 99999999 588888 8888888865
No 51
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.63 E-value=2.8e-15 Score=113.39 Aligned_cols=86 Identities=22% Similarity=0.312 Sum_probs=75.6
Q ss_pred eEEEEeccCC--CCCCCcccccceeEEEEEEEEeCCC--CeEEEEEecC--CCcEEEeCCceEEEEccC-CCCCCceEEE
Q psy2920 115 YRFIVGDLKS--SLNSNVSHWKKFSSIGSVSATDADG--DKVAYKLAVP--SNLVVIVPQTGELLLTGD-PPSDDVEYEL 187 (325)
Q Consensus 115 ~~~~v~E~~~--~g~~~~~~~~~~~~v~~v~A~D~D~--~~v~Y~i~~~--~~~F~i~~~tG~i~l~~~-d~e~~~~y~l 187 (325)
+.++|+|+.+ .| +.|+++. +|+|. ++|+|+|.+. .++|.|++.+|.|++.+. |||....|.|
T Consensus 5 ~~~~v~En~~~p~~----------~~v~~v~-~D~D~gN~~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~y~l 73 (98)
T 1zxk_A 5 NQMFVLEEFSGPEP----------ILVGRLH-TDLDPGSKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAEYTL 73 (98)
T ss_dssp CEEEECGGGCSSSC----------EEEEECC-BCCCCC--CEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSEEEE
T ss_pred ceEEEECCCCCCCC----------eEEEEEE-ECCCCCCCEEEEEEeCCCCCCEEEEECCccEEEECccCCCcCCCeEEE
Confidence 5688999985 56 9999997 99997 5899999874 347999999999999999 9999999999
Q ss_pred EEEEEeCCC-CCCcceecEEEEEEEec
Q psy2920 188 TVEAHDLQS-PSRYAREPAQVWLQFNS 213 (325)
Q Consensus 188 ~V~a~D~g~-p~~~s~~t~~v~I~v~d 213 (325)
+|+|+|+|. |++++ +++|+|+|.|
T Consensus 74 ~v~A~D~g~~~~l~~--~~~v~I~V~D 98 (98)
T 1zxk_A 74 TAQAVDFETNKPLEP--PSEFIIKVQD 98 (98)
T ss_dssp EEEEEETTTCCBSSC--CEEEEEEECC
T ss_pred EEEEEECCCCCCcce--eEEEEEEEEC
Confidence 999999997 77887 8899998865
No 52
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.61 E-value=2.2e-15 Score=115.47 Aligned_cols=85 Identities=25% Similarity=0.312 Sum_probs=73.1
Q ss_pred CCCCC--CCceEEeeEEEecCCCCCCCceEEEEEeeCCC----CceEEEeCCCCccccccccCCcceEEEecccCCcccc
Q psy2920 1 MENSK--SGTGVKGLPILVASSHKHPHQLVRYSITQGND----NHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEV 74 (325)
Q Consensus 1 ~En~~--~Gt~v~~~~a~d~D~~~~~~~~i~y~i~~~~~----~~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~ 74 (325)
|||++ .|+.|+++.| |.+ .|+.++|+|.+++. .+.|.|++.+| .|.+.++||||..
T Consensus 14 ~En~~~~~~~~v~~v~A---d~g--~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG-------------~I~~~~~LDrE~~ 75 (105)
T 2omz_B 14 PENEKGPFPKNLVQIKS---NKD--KEGKVFYSITGQGADTPPVGVFIIERETG-------------WLKVTEPLDRERI 75 (105)
T ss_dssp ESSCCSSSSEEEEECEE---GGG--GSSCCEEEEEEBTTTBSSTTSEEECTTTC-------------EEEECSCCCTTTC
T ss_pred eCCCCCCCCcEEEEEEC---CCC--CCCeEEEEEeCCCCCCCccCEEEEeCCCC-------------EEEECccCCcCCC
Confidence 69998 5889999987 333 35999999998653 35899999999 9999999999999
Q ss_pred cEEEEEEEEEeCCCCC-eeEEEEEEEEecC
Q psy2920 75 AQYSLVITATDVKGIN-KAETHVTVDVLDE 103 (325)
Q Consensus 75 ~~~~l~v~a~D~~~~~-~~~~~v~v~V~Dv 103 (325)
..|.|+|.|+|.|+++ ++++.|.|.|+|+
T Consensus 76 ~~y~l~V~A~D~g~p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 76 ATYTLFSHAVSSNGNAVEDPMEILITVTDQ 105 (105)
T ss_dssp CEEEEEEEEECTTSCBSSCCEEEEEEEEC-
T ss_pred CeEEEEEEEEECCCCceeeEEEEEEEEEeC
Confidence 9999999999998876 6889999999996
No 53
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.60 E-value=2.1e-15 Score=115.61 Aligned_cols=87 Identities=14% Similarity=0.161 Sum_probs=75.1
Q ss_pred EEEEeccCC--CCCCCcccccceeEEEEEEEEeCCCCeEEEEEecCC------CcEEEeCCceEEEEccC-CCCCCceEE
Q psy2920 116 RFIVGDLKS--SLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPS------NLVVIVPQTGELLLTGD-PPSDDVEYE 186 (325)
Q Consensus 116 ~~~v~E~~~--~g~~~~~~~~~~~~v~~v~A~D~D~~~v~Y~i~~~~------~~F~i~~~tG~i~l~~~-d~e~~~~y~ 186 (325)
.++|+||.+ .| ..|++|.|.|...++|+|+|.++. ++|.|++.+|.|++.+. |||....|.
T Consensus 10 ~~~V~En~~~~~~----------~~v~~v~Ad~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~y~ 79 (105)
T 2omz_B 10 PISCPENEKGPFP----------KNLVQIKSNKDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIATYT 79 (105)
T ss_dssp CCCEESSCCSSSS----------EEEEECEEGGGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCEEE
T ss_pred CEEEeCCCCCCCC----------cEEEEEECCCCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCCeEE
Confidence 478999998 35 899999994433479999998742 58999999999999999 999999999
Q ss_pred EEEEEEeCCCCCCcceecEEEEEEEecC
Q psy2920 187 LTVEAHDLQSPSRYAREPAQVWLQFNSP 214 (325)
Q Consensus 187 l~V~a~D~g~p~~~s~~t~~v~I~v~d~ 214 (325)
|+|+|+|+|.|++++ +++|+|+|.|+
T Consensus 80 l~V~A~D~g~p~~~~--~~~v~I~V~Dv 105 (105)
T 2omz_B 80 LFSHAVSSNGNAVED--PMEILITVTDQ 105 (105)
T ss_dssp EEEEEECTTSCBSSC--CEEEEEEEEC-
T ss_pred EEEEEEECCCCceee--EEEEEEEEEeC
Confidence 999999999999988 88999999874
No 54
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.49 E-value=5.7e-15 Score=116.76 Aligned_cols=97 Identities=14% Similarity=0.119 Sum_probs=82.0
Q ss_pred cceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCCC--eE---EEEEecC--CCcEEEeCCceEEEEccC-CCCCC-
Q psy2920 112 QKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD--KV---AYKLAVP--SNLVVIVPQTGELLLTGD-PPSDD- 182 (325)
Q Consensus 112 ~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~~--~v---~Y~i~~~--~~~F~i~~~tG~i~l~~~-d~e~~- 182 (325)
...|.++|+|+.++| +.|++| |+|+|.+ .+ .|+|.++ .++|.|++.||.|++.+. |||..
T Consensus 10 ~~~~~~~V~E~~~~G----------t~V~~v-a~D~d~~~~~i~~~~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~c 78 (125)
T 1wyj_A 10 SATITYSVLEETDRG----------SLVGNL-AKDLGLSLRELITRGAQILSKGNKQLLQLEQKSGNLLLKEKLDREELC 78 (125)
T ss_dssp CCCCCEEECSSCCTT----------CEEEES-TTTTTCCHHHHHHTTCEEECSSSSCSEEECSSSSEEEESSCCCSTTTC
T ss_pred CceEEEEEECCCCCC----------CEEEEE-EecCCCCCCceeeEEEEEecCCCCCeEEEECCccEEEECccccchhhc
Confidence 356778999999999 999999 9999975 45 8999863 478999999999999999 99999
Q ss_pred ---ceEEEEEEEEeCCCCCCcceecEEEEEEEecCCCCCceeeec
Q psy2920 183 ---VEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDEQLLQM 224 (325)
Q Consensus 183 ---~~y~l~V~a~D~g~p~~~s~~t~~v~I~v~d~~~~P~~~~~~ 224 (325)
..|.|.|+|.+.. | . + +++|.|+|.|+|+++|.|.+.
T Consensus 79 ~~~~~y~l~v~a~~~~-p-~-~--~~~V~I~V~DvNDN~P~F~~~ 118 (125)
T 1wyj_A 79 GSTNPCILHFQVLLKS-P-V-Q--FIQGEIQLQDVNDHAPEFMED 118 (125)
T ss_dssp TTCSSCCBCCEEEETT-T-T-E--EECCCEEECCCCCCCCCCCCC
T ss_pred ccCCcEEEEEEEEECC-C-C-e--EEEEEEEEEEccCCCCcCCCc
Confidence 9999999999732 2 2 3 789999999988777767665
No 55
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.48 E-value=6.6e-15 Score=112.42 Aligned_cols=88 Identities=23% Similarity=0.212 Sum_probs=70.5
Q ss_pred CCCCCCCceEEeeEEEecCCCCCCCceEEEEEeeCCCCceEEEeCCCCccccccccCCcceEEEecccCCccccc-----
Q psy2920 1 MENSKSGTGVKGLPILVASSHKHPHQLVRYSITQGNDNHTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVA----- 75 (325)
Q Consensus 1 ~En~~~Gt~v~~~~a~d~D~~~~~~~~i~y~i~~~~~~~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~~----- 75 (325)
||++++|+.|+++ |.|.|......+.+.|+|.+++...+|.|++.+| .|.+.++||||..+
T Consensus 10 ~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG-------------~i~~~~~LDRE~~~~~~~~ 75 (103)
T 1wuz_A 10 PEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKDRGDLLEVNLQNG-------------ILFVNSRIDREELCGRSAE 75 (103)
T ss_dssp ESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSSCSCSEEEETTTT-------------EEEECSCCSHHHHCSSSSS
T ss_pred ECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCCCccEEEEECCeE-------------EEEECCcCccccccCCCCc
Confidence 6999999999999 8887654221246899998876778999999999 99999999999864
Q ss_pred -EEEEEEEEEeCCCCCeeEEEEEEEEecCCCC
Q psy2920 76 -QYSLVITATDVKGINKAETHVTVDVLDENDN 106 (325)
Q Consensus 76 -~~~l~v~a~D~~~~~~~~~~v~v~V~DvNdn 106 (325)
.|.+.+.+ . .|. ..+.|.|.|+|+|||
T Consensus 76 ~~~~~~v~~--~-~p~-~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 76 CSIHLEVIV--D-RPL-QVFHVEVEVRDINDN 103 (103)
T ss_dssp CEEEEEEEE--T-TTT-EEEEEEEEEECCSCC
T ss_pred EEEEEEEEE--C-CCC-EEEEEEEEEEEcCCC
Confidence 55555554 2 233 478999999999997
No 56
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.02 E-value=3.9e-11 Score=91.29 Aligned_cols=89 Identities=13% Similarity=0.145 Sum_probs=70.1
Q ss_pred ceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCCC-----eEEEEEecC--CCcEEEeCCceEEEEccC-CCCCC--
Q psy2920 113 KVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD-----KVAYKLAVP--SNLVVIVPQTGELLLTGD-PPSDD-- 182 (325)
Q Consensus 113 ~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~~-----~v~Y~i~~~--~~~F~i~~~tG~i~l~~~-d~e~~-- 182 (325)
..|.++|+|+.++| +.|++| |.|+|.+ .+.|+|.++ .++|.|++.||.|++.+. |||..
T Consensus 3 ~~~~~~V~E~~~~G----------t~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~~~ 71 (103)
T 1wuz_A 3 SQIHYSIPEEAKHG----------TFVGRI-AQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCG 71 (103)
T ss_dssp CEEEEEEESSCCTT----------CBCCCH-HHHHTCCHHHHTTTTBCCBCSSCSCSEEEETTTTEEEECSCCSHHHHCS
T ss_pred eeEEEEEECCCCCC----------CEEEEE-EeccCCCCcccccEEEEEEeCCCccEEEEECCeEEEEECCcCccccccC
Confidence 46788999999999 999999 9999863 589999863 479999999999999999 99864
Q ss_pred --ceEEEEEEEEeCCCCCCcceecEEEEEEEecCCCC
Q psy2920 183 --VEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQ 217 (325)
Q Consensus 183 --~~y~l~V~a~D~g~p~~~s~~t~~v~I~v~d~~~~ 217 (325)
..|.+.++|... .| + . .++|.|+|.|+|++
T Consensus 72 ~~~~~~~~~~v~~~-~p-~-~--~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 72 RSAECSIHLEVIVD-RP-L-Q--VFHVEVEVRDINDN 103 (103)
T ss_dssp SSSSCEEEEEEEET-TT-T-E--EEEEEEEEECCSCC
T ss_pred CCCcEEEEEEEEEC-CC-C-E--EEEEEEEEEEcCCC
Confidence 334555555542 23 2 3 78999999998764
No 57
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=95.86 E-value=0.62 Score=38.49 Aligned_cols=115 Identities=17% Similarity=0.111 Sum_probs=64.8
Q ss_pred cccEEEEEEEEEeCCCCCeeEEEEEEEEecCCCCCCccCcceeEEEEeccCC---CCCCCcccccceeEEEEEEEEeCCC
Q psy2920 73 EVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKS---SLNSNVSHWKKFSSIGSVSATDADG 149 (325)
Q Consensus 73 ~~~~~~l~v~a~D~~~~~~~~~~v~v~V~DvNdn~P~f~~~~~~~~v~E~~~---~g~~~~~~~~~~~~v~~v~A~D~D~ 149 (325)
....|.|+++|+|..|..+....+.|.|.+ ..+|.. .+..+.+.. .| +..-.+..|.|.|+
T Consensus 59 ~~G~htlta~A~D~aGn~s~s~~v~vtV~~--~~~Ptv-----~itsP~~g~~~~~~---------~~vtl~~~AsD~~g 122 (190)
T 3pdd_A 59 AVGAYNLKAVAVLSDGRRIESPVTPVLVKV--IVKPTV-----KLTAPKSNVVAYGN---------EFLKITATASDSDG 122 (190)
T ss_dssp CSEEEEEEEEEEETTSCEEECCCEEEEEEC--CCCCEE-----EEEECCTTCCCBTT---------SEEEEEEEEECSSS
T ss_pred CCccEEEEEEEEECCCCEeeecceeEEecc--CCCCce-----eecCCCCCcEEecC---------CeEEEEEEEECCCC
Confidence 457899999999987744443456676665 346643 233333321 12 14556788888886
Q ss_pred C--eEEEEEecCCCcEEEeCC-ceEEEEccCCCCCCceEEEEEEEEeCCCCCCcceecEEEEEEEe
Q psy2920 150 D--KVAYKLAVPSNLVVIVPQ-TGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFN 212 (325)
Q Consensus 150 ~--~v~Y~i~~~~~~F~i~~~-tG~i~l~~~d~e~~~~y~l~V~a~D~g~p~~~s~~t~~v~I~v~ 212 (325)
+ ++.|.+.+ ....-+.. .-..... . ....|.|+++|+|..+-.- ....|.|.|.
T Consensus 123 ~V~~Ve~~~dg--~~v~t~t~~~y~~~~~---~-~~G~~tl~a~A~D~aGn~s---~s~~vtvtv~ 179 (190)
T 3pdd_A 123 KISRVDFLVDG--EVIGSDREAPYEYEWK---A-VEGNHEISVIAYDDDDAAS---TPDSVKIFVK 179 (190)
T ss_dssp CEEEEEEEETT--EEEEEECSSSEEEEEE---C-CSEEEEEEEEEEETTCCBC---CCEEEEEEEB
T ss_pred cEEEEEEEECC--EEEecccCCCEEEEEe---c-CCeeEEEEEEEEECCCCEE---ecceEEEEEC
Confidence 4 55555532 11111110 0111111 1 4578999999999886432 2456777763
No 58
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=93.34 E-value=0.46 Score=44.39 Aligned_cols=65 Identities=20% Similarity=0.287 Sum_probs=47.5
Q ss_pred EeCCCCeEEEEEec--CC----CcEEEe-CCceEEEEccCCCCCCceEEEEEEEEeCCCCCCcceecEEEEEEE
Q psy2920 145 TDADGDKVAYKLAV--PS----NLVVIV-PQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQF 211 (325)
Q Consensus 145 ~D~D~~~v~Y~i~~--~~----~~F~i~-~~tG~i~l~~~d~e~~~~y~l~V~a~D~g~p~~~s~~t~~v~I~v 211 (325)
+|+|++.++|+-.. +. ....|. ..+..+..+.+.-+....|.|.++|+|.+.|.+++ +..|.|+|
T Consensus 365 sDPDGD~LtY~W~q~~g~g~~~~~vtls~~~~~~~sft~P~~~~~~tl~f~LtVTD~~~p~lTs--~~rViVtV 436 (437)
T 2yhg_A 365 SDPDGDSLNYSWSHYGEADSYSGSVSISNSSSASANVQIPSNAGGKDIHILLTLRDNGSPNLYA--YRRVVINV 436 (437)
T ss_dssp BCTTCCCEEEEEEECTTTSSCCSCCCEETTTSSEEEEECCTTCTTCEEEEEEEEEECSSSCCEE--EEEEEEEE
T ss_pred eCCCCCeEEEEEEEeCCCCccccceEeecCCCceEEEEeCCCCCCcEEEEEEEEEeCCCCCccE--EeEEEEEe
Confidence 49999899998864 22 245664 55566777666334567899999999999888888 66777765
No 59
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=82.57 E-value=18 Score=29.41 Aligned_cols=35 Identities=9% Similarity=-0.056 Sum_probs=22.0
Q ss_pred CCceEEEEEEEEeCCCCCCcceecEEEEEEEecCCCCCc
Q psy2920 181 DDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQDE 219 (325)
Q Consensus 181 ~~~~y~l~V~a~D~g~p~~~s~~t~~v~I~v~d~~~~P~ 219 (325)
....|.|.++|+|..+.... ...+.|.|.+ +.+|.
T Consensus 59 ~~G~htlta~A~D~aGn~s~---s~~v~vtV~~-~~~Pt 93 (190)
T 3pdd_A 59 AVGAYNLKAVAVLSDGRRIE---SPVTPVLVKV-IVKPT 93 (190)
T ss_dssp CSEEEEEEEEEEETTSCEEE---CCCEEEEEEC-CCCCE
T ss_pred CCccEEEEEEEEECCCCEee---ecceeEEecc-CCCCc
Confidence 45789999999998763221 2345666644 44554
No 60
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=80.12 E-value=30 Score=30.37 Aligned_cols=85 Identities=15% Similarity=0.001 Sum_probs=43.6
Q ss_pred EEEecccCCcccccEEEEEEEEEeCCCCCeeEEEEEEEEecCCCCCCccCcceeEEEEeccCCCCCCCcccccceeEEEE
Q psy2920 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGS 141 (325)
Q Consensus 62 ~l~~~~~LDrE~~~~~~l~v~a~D~~~~~~~~~~v~v~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~ 141 (325)
.|.+...--+|....|.|.+..-..+...-.....+|+|.| ||.+|.|....-...+.|+. | ....+
T Consensus 78 ~V~I~dD~~~E~dEtF~v~Ls~p~~~a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g----------~~~~~ 144 (298)
T 3rb5_A 78 RIEVIDDDVFEEDECFYIRLFNPSEGVKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV--G----------RFELK 144 (298)
T ss_dssp EECBCCCSSCCCCEEEEEEEECCCTTCCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--C----------CEEEE
T ss_pred EEEEeCCCCccCcEEEEEEEeCCCCCcEECCCceEEEEEec-cccccccccccccEEeecCC--c----------eEEEE
Confidence 33333333345555666655432221111122345566676 56688775554466788874 3 44455
Q ss_pred EEEEeCCCC--eEEEEEecC
Q psy2920 142 VSATDADGD--KVAYKLAVP 159 (325)
Q Consensus 142 v~A~D~D~~--~v~Y~i~~~ 159 (325)
|.-.-.-.+ .|.|+..++
T Consensus 145 V~Rs~~~~g~vtV~~~T~dG 164 (298)
T 3rb5_A 145 VMRYSGARGTVIVPYWTEND 164 (298)
T ss_dssp EEEESCCCSCEEEEEEEEEC
T ss_pred EEEEecCCCCEEEEEEecCC
Confidence 444333233 577776654
No 61
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=79.49 E-value=7.1 Score=31.12 Aligned_cols=81 Identities=15% Similarity=0.180 Sum_probs=57.7
Q ss_pred CCCCCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCCC-eEEEEEecCCCcEEEeCCceEEEEccCCCCCC
Q psy2920 104 NDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGD-KVAYKLAVPSNLVVIVPQTGELLLTGDPPSDD 182 (325)
Q Consensus 104 Ndn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~~-~v~Y~i~~~~~~F~i~~~tG~i~l~~~d~e~~ 182 (325)
--+.|-|.+..|...++-....| ..+++|.-.|-..+ .+.|.-.++ ..|.|+ ..|.|+++..-....
T Consensus 30 ~~C~pGF~~~~~~~~vp~~l~~g----------~~lgkV~F~dC~g~~~~~~~ssDp-~dFkV~-~DGtVya~r~v~L~~ 97 (159)
T 1op4_A 30 ALCKTGFPEDVYSAVLPKDVHEG----------QPLLNVKFSNCNRKRKVQYESSEP-ADFKVD-EDGTVYAVRSFPLTA 97 (159)
T ss_dssp CCCCCBCCSCEEEECCCCSSCSS----------CCEEECCCBCCSSCCCEEEECCCS-SEEEEE-TTTEEEEESCCSCSS
T ss_pred ccccCCcCcceeEEeccccccCC----------ceeceeecccCCCCCceeEEcCCC-CCeEEe-CCCcEEEecceeecC
Confidence 34679999999976676666777 89999999998864 566655432 279996 678888888722222
Q ss_pred ceEEEEEEEEeCCC
Q psy2920 183 VEYELTVEAHDLQS 196 (325)
Q Consensus 183 ~~y~l~V~a~D~g~ 196 (325)
..-.+.|.|.|...
T Consensus 98 ~~~~F~V~a~D~~t 111 (159)
T 1op4_A 98 EQAKFLIYAQDKET 111 (159)
T ss_dssp SCEEEEEEEEETTT
T ss_pred CCcEEEEEEEcCCC
Confidence 33478899999543
No 62
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=74.55 E-value=9.8 Score=27.90 Aligned_cols=46 Identities=26% Similarity=0.394 Sum_probs=35.8
Q ss_pred EEEecccCCcccccEEEEEEEEEeCCCCCeeEEEEEEEEecCCCCCC
Q psy2920 62 LLVTSGDIDREEVAQYSLVITATDVKGINKAETHVTVDVLDENDNSP 108 (325)
Q Consensus 62 ~l~~~~~LDrE~~~~~~l~v~a~D~~~~~~~~~~v~v~V~DvNdn~P 108 (325)
.|.+....|-.....|.++..++|..| +.++.+.+|.|.+..+..|
T Consensus 46 ~I~V~g~Vdt~k~G~Y~VtY~VtDs~G-n~~t~trtVtV~~~~e~~~ 91 (103)
T 2kpn_A 46 KIKVDGEVDTTKAGTYVLTYTVTDSKG-HEVTAKQTVTVKVREEVKN 91 (103)
T ss_dssp GCEEESCCCSSSCEEEEEEEEEECTTS-CEEEEEEEEEEECSSCCCC
T ss_pred eEEEeCcccCCCceEEEEEEEEEcCCC-CEEEEEEEEEEeCCCcccC
Confidence 455567899999999999999999876 5567778888887655433
No 63
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=72.33 E-value=25 Score=32.70 Aligned_cols=62 Identities=15% Similarity=0.159 Sum_probs=40.2
Q ss_pred ceEEEEEeeCCCC----ceEEEeCCCCccccccccCCcceEEEecccCCcccccEEEEEEEEEeCCCCC-eeEEEEEEEE
Q psy2920 26 QLVRYSITQGNDN----HTFALKNPTTHEIRNSTESKSGVLLVTSGDIDREEVAQYSLVITATDVKGIN-KAETHVTVDV 100 (325)
Q Consensus 26 ~~i~y~i~~~~~~----~~F~i~~~~g~~~~~~~~~~~~~~l~~~~~LDrE~~~~~~l~v~a~D~~~~~-~~~~~v~v~V 100 (325)
..++|+....... ....|...++ ..+.+..+-+ +....|+|.++++|.+.|. ++..+|.|+|
T Consensus 370 D~LtY~W~q~~g~g~~~~~vtls~~~~------------~~~sft~P~~-~~~~tl~f~LtVTD~~~p~lTs~~rViVtV 436 (437)
T 2yhg_A 370 DSLNYSWSHYGEADSYSGSVSISNSSS------------ASANVQIPSN-AGGKDIHILLTLRDNGSPNLYAYRRVVINV 436 (437)
T ss_dssp CCEEEEEEECTTTSSCCSCCCEETTTS------------SEEEEECCTT-CTTCEEEEEEEEEECSSSCCEEEEEEEEEE
T ss_pred CeEEEEEEEeCCCCccccceEeecCCC------------ceEEEEeCCC-CCCcEEEEEEEEEeCCCCCccEEeEEEEEe
Confidence 6799998764222 1344543332 1556655544 4567899999999997654 6777777776
No 64
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.33 E-value=7.5 Score=28.31 Aligned_cols=32 Identities=25% Similarity=0.423 Sum_probs=25.7
Q ss_pred cccEEEEEEEEEeCCCCCeeEEEEEEEEecCCC
Q psy2920 73 EVAQYSLVITATDVKGINKAETHVTVDVLDEND 105 (325)
Q Consensus 73 ~~~~~~l~v~a~D~~~~~~~~~~v~v~V~DvNd 105 (325)
....|.+++.++|..| .++...+.|.|...+.
T Consensus 67 ~~G~y~f~LTVtD~~G-~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 67 QVGTYVFTLTVKDERN-LQSQSSVNVIVKEESG 98 (102)
T ss_dssp CSSEEEEEEEEEBTTC-CEEEEEEEEEEECCSS
T ss_pred CCeEEEEEEEEEeCCC-CEEEeEEEEEEcCCCC
Confidence 4679999999999865 5677888888887655
No 65
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.38 E-value=8.3 Score=28.07 Aligned_cols=65 Identities=15% Similarity=0.128 Sum_probs=39.0
Q ss_pred eCCCCeEEEEEe--cCCCcEEEe-CCceEEEEccCCCCCCceEEEEEEEEeCCCCCCcceecEEEEEEEecCCCCC
Q psy2920 146 DADGDKVAYKLA--VPSNLVVIV-PQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSPVLQD 218 (325)
Q Consensus 146 D~D~~~v~Y~i~--~~~~~F~i~-~~tG~i~l~~~d~e~~~~y~l~V~a~D~g~p~~~s~~t~~v~I~v~d~~~~P 218 (325)
| |.+.+.|... ++.....+. ..+..+..... ....|.+.+.|+|..+ .++ +.++.|.|...++++
T Consensus 33 D-Dg~~lsY~W~~~~Gp~~~~l~~~~~~~~~~t~~---~~G~y~f~LTVtD~~G--~s~--s~~v~VtV~~~~~~~ 100 (102)
T 2yrl_A 33 D-DQKIISYLWEKTQGPDGVQLENANSSVATVTGL---QVGTYVFTLTVKDERN--LQS--QSSVNVIVKEESGPS 100 (102)
T ss_dssp S-SSCBCCCCEEEEESCTTCEEESTTSSEEEEESC---CSSEEEEEEEEEBTTC--CEE--EEEEEEEEECCSSCC
T ss_pred C-CCCeEEEEEEECCCCceeEEccCCCccEEEECC---CCeEEEEEEEEEeCCC--CEE--EeEEEEEEcCCCCCC
Confidence 5 6666666654 332223443 33334444332 4678999999999875 444 677888886655444
No 66
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=59.10 E-value=92 Score=27.23 Aligned_cols=20 Identities=10% Similarity=-0.051 Sum_probs=10.1
Q ss_pred CCCCCccCcceeEEEEeccC
Q psy2920 104 NDNSPVFSQKVYRFIVGDLK 123 (325)
Q Consensus 104 Ndn~P~f~~~~~~~~v~E~~ 123 (325)
+|++..|....-...|.|+.
T Consensus 6 dd~~g~i~F~~~~y~V~E~~ 25 (298)
T 3rb5_A 6 ADDPIRMYFEPGHYTVMENC 25 (298)
T ss_dssp -----CEEESSSEEEEETTS
T ss_pred CCCceEEEEeCCEEEEecCc
Confidence 45666666555566788875
No 67
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=56.72 E-value=52 Score=23.63 Aligned_cols=29 Identities=14% Similarity=0.091 Sum_probs=22.5
Q ss_pred ccEEEEEEEEEeCCCCCeeEEEEEEEEec
Q psy2920 74 VAQYSLVITATDVKGINKAETHVTVDVLD 102 (325)
Q Consensus 74 ~~~~~l~v~a~D~~~~~~~~~~v~v~V~D 102 (325)
...|.|.++|+|..|.......+.|.|.+
T Consensus 60 ~G~htl~a~AtD~~G~~~tS~~v~vtV~~ 88 (98)
T 3pe9_A 60 EGNHEISVIAYDDDDAASTPDSVKIFVKQ 88 (98)
T ss_dssp SEEEEEEEEEEETTCCBCCCEEEEEEEEC
T ss_pred CccEEEEEEEEECCCCEEeeeEEEEEECc
Confidence 57899999999998755556667777664
No 68
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=51.03 E-value=35 Score=27.04 Aligned_cols=53 Identities=17% Similarity=0.406 Sum_probs=32.6
Q ss_pred EEEEEeCCCCccceEEEEEEeCCcccceEeeCCCCceEeCCCeeEEEceeCccccCCCCceEEEEEEEecC
Q psy2920 249 RIDFSETDGEMEGRIVFALEKETEREKFKIRDENPWITVDENGDVRVKKRWDFEELGPEKTIDFWVTINNQ 319 (325)
Q Consensus 249 ~v~a~d~D~~~~~~i~y~i~~~~~~~~F~i~~~~~~f~i~~tG~i~~~~~lD~E~~~~~~~~~l~V~a~D~ 319 (325)
+|.+.|. ..+..+.|... +...|.|. .+|.|++.+++-.-.. .-.|.|.|.|.
T Consensus 57 kV~F~dC--~g~~~~~~~ss---Dp~dFkV~---------~DGtVya~r~v~L~~~----~~~F~V~a~D~ 109 (159)
T 1op4_A 57 NVKFSNC--NRKRKVQYESS---EPADFKVD---------EDGTVYAVRSFPLTAE----QAKFLIYAQDK 109 (159)
T ss_dssp ECCCBCC--SSCCCEEEECC---CSSEEEEE---------TTTEEEEESCCSCSSS----CEEEEEEEEET
T ss_pred eeecccC--CCCCceeEEcC---CCCCeEEe---------CCCcEEEecceeecCC----CcEEEEEEEcC
Confidence 4445544 34455555532 22136665 6999999999766442 44888888884
No 69
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=50.50 E-value=35 Score=23.54 Aligned_cols=30 Identities=23% Similarity=0.446 Sum_probs=22.3
Q ss_pred cccccEEEEEEEEEeCCCCCeeEEEEEEEEe
Q psy2920 71 REEVAQYSLVITATDVKGINKAETHVTVDVL 101 (325)
Q Consensus 71 rE~~~~~~l~v~a~D~~~~~~~~~~v~v~V~ 101 (325)
|.....|.+++.++|..| .+.+..+.|.|.
T Consensus 55 y~~~G~Y~v~LtVtd~~G-~~~t~~~~V~V~ 84 (85)
T 2y72_A 55 YKKAGTYNVTLKVTDDKG-ATATESFTIEIK 84 (85)
T ss_dssp CSSCEEEEEEEEEEETTS-CEEEEEEEEEEE
T ss_pred cCCCeEEEEEEEEEECCC-CEEEEEEEEEEc
Confidence 567789999999999866 345566666664
No 70
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=46.41 E-value=68 Score=21.96 Aligned_cols=58 Identities=16% Similarity=0.197 Sum_probs=34.5
Q ss_pred EEeCCCCeEEEEEecCCCcEEEeCCceEEEEccCCCCCCceEEEEEEEEeCCCCCCcceecEEEEEEE
Q psy2920 144 ATDADGDKVAYKLAVPSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQF 211 (325)
Q Consensus 144 A~D~D~~~v~Y~i~~~~~~F~i~~~tG~i~l~~~d~e~~~~y~l~V~a~D~g~p~~~s~~t~~v~I~v 211 (325)
..|+|...+.|...-+++...- ..+-.. -|.....|.+.+.++|..+ ..+ +.++.|.|
T Consensus 26 s~d~~g~~~~y~W~fgdG~~s~-~~~~~h-----ty~~~G~Y~v~LtVtd~~G--~~~--t~~~~V~V 83 (85)
T 2y72_A 26 SKDEDGKIVSYDWDFGDGATSR-GKNSVH-----AYKKAGTYNVTLKVTDDKG--ATA--TESFTIEI 83 (85)
T ss_dssp CBCTTSCEEEEEEECSSSCEEE-SSEEEE-----ECSSCEEEEEEEEEEETTS--CEE--EEEEEEEE
T ss_pred ccCCCCCEEEEEEEECCCCccc-ccceEE-----EcCCCeEEEEEEEEEECCC--CEE--EEEEEEEE
Confidence 3466666778887644433221 111111 3667789999999999776 333 45566655
No 71
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=44.66 E-value=84 Score=22.49 Aligned_cols=66 Identities=18% Similarity=0.163 Sum_probs=38.7
Q ss_pred eEEEEEEEEeCCCC--eEEEEEecCCCcEEEeCCce-EEEEccCCCCCCceEEEEEEEEeCCCCCCcceecEEEEEEE
Q psy2920 137 SSIGSVSATDADGD--KVAYKLAVPSNLVVIVPQTG-ELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQF 211 (325)
Q Consensus 137 ~~v~~v~A~D~D~~--~v~Y~i~~~~~~F~i~~~tG-~i~l~~~d~e~~~~y~l~V~a~D~g~p~~~s~~t~~v~I~v 211 (325)
.......|.|.|.+ +|.|.+.+. ...-+...- ..... .. ...|.|.++|+|..+.... ...|.|.|
T Consensus 18 ~v~i~a~A~D~dg~V~kVef~vdg~--~vg~dt~apy~~~w~---~~-~G~htl~a~AtD~~G~~~t---S~~v~vtV 86 (98)
T 3pe9_A 18 FLKITATASDSDGKISRVDFLVDGE--VIGSDREAPYEYEWK---AV-EGNHEISVIAYDDDDAAST---PDSVKIFV 86 (98)
T ss_dssp EEEEEEEECCSSSCEEEEEEEETTE--EEEEECSSSEEEEEE---CC-SEEEEEEEEEEETTCCBCC---CEEEEEEE
T ss_pred EEEEEEEEEeCCCCEEEEEEEECCE--EecccccCCEEEEEE---cC-CccEEEEEEEEECCCCEEe---eeEEEEEE
Confidence 56678888888863 788887542 111111100 11111 11 5789999999998874432 35666666
No 72
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=42.25 E-value=50 Score=24.05 Aligned_cols=33 Identities=15% Similarity=0.113 Sum_probs=23.7
Q ss_pred CCCCCceEEEEEEEEeCCCCCCcceecEEEEEEEecC
Q psy2920 178 PPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFNSP 214 (325)
Q Consensus 178 d~e~~~~y~l~V~a~D~g~p~~~s~~t~~v~I~v~d~ 214 (325)
|......|.++..++|+.+ ..+ +++.+|.|.+.
T Consensus 54 dt~k~G~Y~VtY~VtDs~G--n~~--t~trtVtV~~~ 86 (103)
T 2kpn_A 54 DTTKAGTYVLTYTVTDSKG--HEV--TAKQTVTVKVR 86 (103)
T ss_dssp CSSSCEEEEEEEEEECTTS--CEE--EEEEEEEEECS
T ss_pred cCCCceEEEEEEEEEcCCC--CEE--EEEEEEEEeCC
Confidence 5667789999999999776 233 55666666553
No 73
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=38.49 E-value=1.3e+02 Score=22.78 Aligned_cols=43 Identities=14% Similarity=-0.036 Sum_probs=20.6
Q ss_pred CCCCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEE-eCCC-CeEEEEEecC
Q psy2920 105 DNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSAT-DADG-DKVAYKLAVP 159 (325)
Q Consensus 105 dn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~-D~D~-~~v~Y~i~~~ 159 (325)
|+.+.+....-...|.|+. | +...+|.-. +.+. -.|.|+..++
T Consensus 2 d~~~~i~F~~~~y~V~E~~--g----------~~~v~V~R~g~~~~~v~V~y~t~~g 46 (137)
T 3ead_A 2 DDPIRMYFEPGHYTVMENC--G----------EFEVRVVRRGDISTYASVEYETQDG 46 (137)
T ss_dssp ---CEEEESSCEEEEEGGG--C----------EEEEEEEEESCCSSCEEEEEEEECS
T ss_pred CCCEEEEEcCCEEEEECCC--e----------EEEEEEEEECCCCceEEEEEEeECC
Confidence 3444444344445677864 2 444444333 2222 2688887764
No 74
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=36.10 E-value=1.4e+02 Score=22.71 Aligned_cols=19 Identities=16% Similarity=0.120 Sum_probs=14.4
Q ss_pred CCCCceEEEEEEEEeCCCC
Q psy2920 179 PSDDVEYELTVEAHDLQSP 197 (325)
Q Consensus 179 ~e~~~~y~l~V~a~D~g~p 197 (325)
......|.+.|.|.+..+.
T Consensus 69 L~p~t~Y~~~V~a~~~~g~ 87 (197)
T 3lpw_A 69 LQEGCSYYFRVLAENEYGI 87 (197)
T ss_dssp CCTTCEEEEEEEEEETTEE
T ss_pred CCCCCEEEEEEEEEcCccc
Confidence 3455689999999987653
No 75
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=35.91 E-value=83 Score=23.84 Aligned_cols=27 Identities=26% Similarity=0.372 Sum_probs=4.4
Q ss_pred EEEEEecCCCCCCccCcceeEEEEeccC
Q psy2920 96 VTVDVLDENDNSPVFSQKVYRFIVGDLK 123 (325)
Q Consensus 96 v~v~V~DvNdn~P~f~~~~~~~~v~E~~ 123 (325)
.+|+|+|= |.+|.|....-...|.|+.
T Consensus 107 atvtI~dd-D~~g~~~f~~~~~~V~E~~ 133 (137)
T 3ead_A 107 ATVMILDD-DHAGIFAFTDSVFEITESV 133 (137)
T ss_dssp EEEEEECC-C------------------
T ss_pred EEEEEECC-CCCCEEEECCCcEEEeccc
Confidence 34445653 6678765444445566653
No 76
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=33.96 E-value=1.1e+02 Score=29.89 Aligned_cols=57 Identities=11% Similarity=0.168 Sum_probs=36.1
Q ss_pred eEEEEEec-CCCcEEEeCCceEEEEccCCCCCCceEEEEEEEEeCCCCCCcceecEEEEEEEe
Q psy2920 151 KVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFN 212 (325)
Q Consensus 151 ~v~Y~i~~-~~~~F~i~~~tG~i~l~~~d~e~~~~y~l~V~a~D~g~p~~~s~~t~~v~I~v~ 212 (325)
+..|+|.+ ..++-.+......++.+.- ....|+|.|+|++..+..... .+++.|.|.
T Consensus 690 ~y~Y~L~G~d~~W~~~~~~~~~~~ytnL---~pG~Y~f~V~a~~~~g~w~~~--~~~l~I~I~ 747 (758)
T 3ott_A 690 KFVYRLEGMDKEWNFLKSNINRITYSNL---SYGNYQLIISKLERDGQPSNR--PHILNIRIL 747 (758)
T ss_dssp CEEEEEETTCSSCEECCTTCCEEEECSC---CSEEEEEEEEEBCTTSCBCSS--CEEEEEEEC
T ss_pred eEEEEecCCCCCccCCCCCcceEEecCC---CCccEEEEEEEeCCCCCccCc--cEEEEEEEC
Confidence 57777876 3455555333344544433 568999999999877643222 567888883
No 77
>1u2c_A Dystroglycan; IG-like domain, S6 like fold, protein binding; 2.30A {Mus musculus} SCOP: b.1.6.2 d.272.1.1
Probab=30.97 E-value=2.4e+02 Score=23.83 Aligned_cols=83 Identities=10% Similarity=0.001 Sum_probs=0.0
Q ss_pred CcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCCCeEEEEEecCC-----CcEEEeCCceEEEEccCCCCCCceE
Q psy2920 111 SQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAVPS-----NLVVIVPQTGELLLTGDPPSDDVEY 185 (325)
Q Consensus 111 ~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~~~v~Y~i~~~~-----~~F~i~~~tG~i~l~~~d~e~~~~y 185 (325)
....|.+.|+.++..| +..+|++.... .|...|+.++.+.=... -.+.+.|
T Consensus 15 vg~~F~~tIP~~~Fsg-----------------------d~~~y~vt~a~g~~LPsWL~fd~~t~TfsG~P~-~~D~G~~ 70 (246)
T 1u2c_A 15 VGRSFRVSIPTDLIAS-----------------------SGEIIKVSAAGKEALPSWLHWDPHSHILEGLPL-DTDKGVH 70 (246)
T ss_dssp TTSCEEEECCHHHHCC-----------------------TTEEEEEEETTSSSCCTTEEEETTTTEEEECCC-GGGCEEE
T ss_pred CCcceEEECCccccCC-----------------------CccEEEEEecCCCCCCcceEEcCCCCeEEeccC-CCCcceE
Q ss_pred EEEEEEEeCCCCCC-cceecEEEEEEEecCCCC
Q psy2920 186 ELTVEAHDLQSPSR-YAREPAQVWLQFNSPVLQ 217 (325)
Q Consensus 186 ~l~V~a~D~g~p~~-~s~~t~~v~I~v~d~~~~ 217 (325)
.+.|.|++.+.-.. .++++..+.|.|...|.+
T Consensus 71 ~i~VtA~~~~~~g~~~~~asdvF~I~V~ped~~ 103 (246)
T 1u2c_A 71 YISVSAARLGANGSHVPQTSSVFSIEVYPEDHN 103 (246)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEEEEEESSCCC
T ss_pred EEEEEEeeccCCCCccccccceEEEEEecCCCc
No 78
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=28.44 E-value=2.1e+02 Score=22.32 Aligned_cols=54 Identities=6% Similarity=-0.114 Sum_probs=24.0
Q ss_pred EEEEEEEEecCCCCCCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCC-C--eEEEEEecC
Q psy2920 93 ETHVTVDVLDENDNSPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADG-D--KVAYKLAVP 159 (325)
Q Consensus 93 ~~~v~v~V~DvNdn~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~-~--~v~Y~i~~~ 159 (325)
.+.+.+.|+|-+ ..+.|....-...|.|+. | +.-.+|.-...+. + .|.|+..++
T Consensus 9 ~~~~~~~i~ddd-~~g~i~F~~~~y~V~E~~--G----------~v~vtV~R~~G~~~~~v~V~y~T~dG 65 (160)
T 3gin_A 9 SAALEVLFQGPG-PVSKIFFEQGTYQCLENC--G----------TVALTIIRRGGDLTNTVFVDFRTEDG 65 (160)
T ss_dssp -------------CEEEEEESCSEEEEETTS--S----------EEEEEEEEESSCTTSCEEEEEEEEES
T ss_pred cceEEEEEecCC-CccEEEEeCCEEEEEcCc--E----------EEEEEEEEccCCCCcEEEEEEEEECC
Confidence 345667777644 366555444456688864 3 4445554443442 2 688988764
No 79
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=26.02 E-value=2.5e+02 Score=27.52 Aligned_cols=55 Identities=15% Similarity=0.166 Sum_probs=35.6
Q ss_pred eEEEEEec-CCCcEEEeCCceEEEEccCCCCCCceEEEEEEEEeCCCCCCcceecEEEEEEE
Q psy2920 151 KVAYKLAV-PSNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQF 211 (325)
Q Consensus 151 ~v~Y~i~~-~~~~F~i~~~tG~i~l~~~d~e~~~~y~l~V~a~D~g~p~~~s~~t~~v~I~v 211 (325)
+..|+|.+ ...+-.. .....+..+.- ....|+|.|+|++..+..... .+++.|.|
T Consensus 725 ~y~YrL~G~d~~W~~~-~~~~~~~ytnL---~pG~Y~f~V~a~n~~g~w~~~--~~~l~i~I 780 (795)
T 4a2l_A 725 TFAYKLEGYDKEWYYL-TDSRTVSYSNL---PQGTYQFLVKAANSDGKWNPI--PTALEIIV 780 (795)
T ss_dssp EEEEEEETTCSSCEEE-SSCCEEEEECC---CSEEEEEEEEEECTTSCBCSS--CEEEEEEE
T ss_pred EEEEEEeCCCCCccCC-CCcCeEEeccc---CCCeEEEEEEEECCCCccCCC--ceEEEEEE
Confidence 67788876 3456555 23344544433 568899999999877643222 56778887
No 80
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=24.43 E-value=1.8e+02 Score=20.26 Aligned_cols=74 Identities=19% Similarity=0.102 Sum_probs=39.4
Q ss_pred CCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCCCeEEEEEec----CCCcEEEe--CCceEEEEccCCCC
Q psy2920 107 SPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAV----PSNLVVIV--PQTGELLLTGDPPS 180 (325)
Q Consensus 107 ~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~~~v~Y~i~~----~~~~F~i~--~~tG~i~l~~~d~e 180 (325)
||.|....-...+.|.... ..-+.+.+. + ...|.+...+ .+..+.+. .....|.+.....+
T Consensus 13 pP~f~~~p~~~~v~~G~~~-----------~l~C~~~G~-P-~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~ 79 (107)
T 3knb_B 13 PPCFLRFPRPVRVVSGAEA-----------ELKCVVLGE-P-PPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPT 79 (107)
T ss_dssp EEEEEECCCCEEEETTSCE-----------EEEEEEEEE-S-CCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGG
T ss_pred CCEEEeCCCcEEEeCCCcE-----------EEEEEEEEe-c-CCEEEEEECcccccceeeEEEeecCceEEEEEecCChh
Confidence 6777665555666664322 333444332 2 2356554322 34566663 34445666655666
Q ss_pred CCceEEEEEEEEeCC
Q psy2920 181 DDVEYELTVEAHDLQ 195 (325)
Q Consensus 181 ~~~~y~l~V~a~D~g 195 (325)
+...|.+. |++..
T Consensus 80 D~G~Y~C~--a~N~~ 92 (107)
T 3knb_B 80 DAGVYVCR--ARNAA 92 (107)
T ss_dssp GCEEEEEE--EEETT
T ss_pred hCEEEEEE--EEECC
Confidence 77888774 45543
No 81
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=23.80 E-value=2.6e+02 Score=27.32 Aligned_cols=55 Identities=15% Similarity=0.123 Sum_probs=33.5
Q ss_pred eEEEEEecC-CCcEEEeCCceEEEEccCCCCCCceEEEEEEEEeCCCCCCcceecEEEEEEE
Q psy2920 151 KVAYKLAVP-SNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQF 211 (325)
Q Consensus 151 ~v~Y~i~~~-~~~F~i~~~tG~i~l~~~d~e~~~~y~l~V~a~D~g~p~~~s~~t~~v~I~v 211 (325)
+..|+|.+- ..+-... ....+..+.- ....|+|.|+|++..+.-... .+++.|.|
T Consensus 719 ~y~YrL~G~d~~W~~~~-~~~~~~ytnL---~pG~Y~f~V~a~~~~g~w~~~--~~~l~i~I 774 (781)
T 3v9f_A 719 EYAYMLKGLENSWYTIN-EQNSVTFRNI---PPGKYEFLVKARLHNQDWSED--TTSLRIHI 774 (781)
T ss_dssp EEEEEEETTEEEEEEES-SCSEEEECSC---CSEEEEEEEEEEETTSCCCSC--CEEEEEEE
T ss_pred EEEEEecCCCCCccCcC-CcceEEEcCC---CCceEEEEEEEECCCCccCCC--ceEEEEEE
Confidence 466777652 3344442 3344444333 568999999999987643223 56777777
No 82
>2e7m_A Protein KIAA0319; PKD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.33 E-value=1.2e+02 Score=22.43 Aligned_cols=38 Identities=13% Similarity=0.070 Sum_probs=25.9
Q ss_pred CCceEEEEccCCCCCCceEEEEEEEEeCCCCCCcceecEEEEEE
Q psy2920 167 PQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQ 210 (325)
Q Consensus 167 ~~tG~i~l~~~d~e~~~~y~l~V~a~D~g~p~~~s~~t~~v~I~ 210 (325)
+..+.+.|.+- ....|.|.|.++|..+ ...+.+.|+|.
T Consensus 67 ~~~~tlkLS~L---~eG~Y~FqltVtd~~~---~ge~~vnVTV~ 104 (113)
T 2e7m_A 67 GHKQTLNLSQL---SVGLYVFKVTVSSENA---FGEGFVNVTVK 104 (113)
T ss_dssp TSSSEEEECSC---CSEEEEECCEEEETTE---EEECCEEEEEE
T ss_pred CCCCeeEecCc---CcEEEEEEEEEECCCC---CccceEEEEEc
Confidence 56677777654 5689999999999775 23235555554
No 83
>2ptt_B Natural killer cell receptor 2B4; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptu_A 1z2k_A
Probab=23.17 E-value=1.3e+02 Score=22.26 Aligned_cols=47 Identities=13% Similarity=-0.025 Sum_probs=33.0
Q ss_pred CCcEEEeCCceEEEEccCCCCCCceEEEEEEEEeCCCCCCcceecEEEEEEEe
Q psy2920 160 SNLVVIVPQTGELLLTGDPPSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFN 212 (325)
Q Consensus 160 ~~~F~i~~~tG~i~l~~~d~e~~~~y~l~V~a~D~g~p~~~s~~t~~v~I~v~ 212 (325)
++.|.++..+|.|.+...-.|+...|.|.|. .+.|. ..+..+.+.|.
T Consensus 65 k~r~~fd~~n~AL~I~~vQ~eDSg~Y~LeVt-~~tG~-----v~~~~fql~Vf 111 (112)
T 2ptt_B 65 SDIYGFDYGDFALSIKSAKLQDSGHYLLEIT-NTGGK-----VCNKNFQLLIL 111 (112)
T ss_dssp GGTEEECTTTCCEEESSCCGGGCEEEEEEEE-CTTCB-----EEEEEEEEEEC
T ss_pred CCEEEEecCCcEEEEEecCcccCceEEEEEe-cCCCc-----EEEEEEEEEee
Confidence 3678899999999888776778889999883 33332 23556666664
No 84
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=21.05 E-value=2.1e+02 Score=19.60 Aligned_cols=86 Identities=12% Similarity=0.085 Sum_probs=44.5
Q ss_pred CCccCcceeEEEEeccCCCCCCCcccccceeEEEEEEEEeCCCCeEEEEEec------CCCcEEEeCCce--EEEEccCC
Q psy2920 107 SPVFSQKVYRFIVGDLKSSLNSNVSHWKKFSSIGSVSATDADGDKVAYKLAV------PSNLVVIVPQTG--ELLLTGDP 178 (325)
Q Consensus 107 ~P~f~~~~~~~~v~E~~~~g~~~~~~~~~~~~v~~v~A~D~D~~~v~Y~i~~------~~~~F~i~~~tG--~i~l~~~d 178 (325)
||.|....-...+.|.... ..-+.+.+. + ...+.+...+ ....|.+....+ .|.+....
T Consensus 5 PP~i~~~p~~~~v~~G~~~-----------~l~C~~~g~-P-~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~ 71 (100)
T 3knb_A 5 PPKIEALPSDISIDEGKVL-----------TVACAFTGE-P-TPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQ 71 (100)
T ss_dssp EEEECCCCSEEEEETTSEE-----------EEEEEEEEE-S-CCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCC
T ss_pred CCEEEeCCCcEEEeCCCeE-----------EEEEEEEEe-c-CCEEEEEECceEeeeeccceeeeecccceEEEEEcCCC
Confidence 6777766656677664322 333334332 2 2356654432 123577754443 45555546
Q ss_pred CCCCceEEEEEEEEeCCCCCCcceecEEEEEEEe
Q psy2920 179 PSDDVEYELTVEAHDLQSPSRYAREPAQVWLQFN 212 (325)
Q Consensus 179 ~e~~~~y~l~V~a~D~g~p~~~s~~t~~v~I~v~ 212 (325)
.++...|.+. |++..+ .. ++++.|.|.
T Consensus 72 ~~D~G~Y~C~--a~N~~G---~~--~~~~~l~V~ 98 (100)
T 3knb_A 72 KQDGGLYTLS--LGNEFG---SD--SATVNIHIR 98 (100)
T ss_dssp GGGCEEEEEE--EEETTE---EE--EEEEEEEEE
T ss_pred ccCCEEEEEE--EEECCC---EE--EEEEEEEEE
Confidence 6677888875 455432 22 455555553
Done!