Query psy2923
Match_columns 141
No_of_seqs 118 out of 497
Neff 6.6
Searched_HMMs 13730
Date Fri Aug 16 21:03:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2923.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/2923hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1k8ib2 d.19.1.1 (B:1-94) Clas 26.2 43 0.0031 20.6 4.0 57 64-121 11-74 (94)
2 d1obba1 c.2.1.5 (A:2-172) Alph 26.2 12 0.00089 25.0 1.5 15 25-39 144-158 (171)
3 d1s6ya1 c.2.1.5 (A:4-172) 6-ph 25.8 13 0.00093 24.8 1.5 15 25-39 139-153 (169)
4 d1up7a1 c.2.1.5 (A:1-162) 6-ph 24.5 14 0.001 24.4 1.5 14 25-38 132-145 (162)
5 d1u8xx1 c.2.1.5 (X:3-169) Malt 17.8 23 0.0017 23.6 1.5 15 25-39 139-153 (167)
6 d1jnda2 d.26.3.1 (A:279-370) I 13.0 36 0.0026 20.7 1.3 10 47-56 70-79 (92)
7 g1uhe.1 b.52.2.1 (B:,A:) Pyruv 13.0 23 0.0017 23.0 0.3 18 21-38 38-55 (121)
8 d1ppya_ b.52.2.1 (A:) Pyruvoyl 10.2 32 0.0023 22.1 0.3 18 20-37 38-55 (118)
9 d1a5za1 c.2.1.5 (A:22-163) Lac 8.9 65 0.0047 20.3 1.5 14 26-39 110-123 (140)
10 d2imqx1 d.151.1.2 (X:3-282) Sa 7.4 2E+02 0.015 18.6 3.9 31 18-49 1-45 (280)
No 1
>d1k8ib2 d.19.1.1 (B:1-94) Class II MHC beta chain, N-terminal domain {Mouse (Mus musculus), H2-DM [TaxId: 10090]}
Probab=26.23 E-value=43 Score=20.60 Aligned_cols=57 Identities=18% Similarity=0.144 Sum_probs=37.8
Q ss_pred EeCCCCc-------EEeccCCceEEccCCCCCCCCCeeeehhHHHHHHHHHHhhhhHHHHHHHHH
Q psy2923 64 SMNDNGT-------VTATPIHPLTWVPELSNGKEDDILILPNIALLSFANVMAKASLLTRMGVNL 121 (141)
Q Consensus 64 ~~~~n~t-------vsy~~~~~~~F~p~~S~~~~~D~it~~N~~~l~~~~~~~~~~~~~~~~~~~ 121 (141)
.+++||| |+|+..----|||+.---.+-| +-++|.+...++..+.+.+.+++++-+.
T Consensus 11 ~Ld~~Gt~~dF~ycvsFNK~~L~CwDp~~~~~~pcd-~g~L~~~A~~is~~LN~~~~lvqRl~~g 74 (94)
T d1k8ib2 11 VLNDAGTPQDFTYCVSFNKDLLACWDPDVGKIVPCE-FGVLSRLAEIISNILNEQESLIHRLQNG 74 (94)
T ss_dssp EEESTTCEEEECCEEEETTSCCEEEETTTTEEEECC-CSTTHHHHHHHHHHHHTCHHHHHHHHHT
T ss_pred eecCCCCccceeEEEEecCCceeeecCCcCeEEeeh-HHHHHHHHHHHHHHHccChHHHHHHHhh
Confidence 3556663 6677776667777754322223 5678888888888888888877765443
No 2
>d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]}
Probab=26.18 E-value=12 Score=25.01 Aligned_cols=15 Identities=13% Similarity=0.025 Sum_probs=13.0
Q ss_pred EEEEEeccChHHHhc
Q psy2923 25 KVYLFNVTNREAFLA 39 (141)
Q Consensus 25 ~~y~FNvTN~~evl~ 39 (141)
+-++.|+|||.+++.
T Consensus 144 ~a~~i~~TNPvdv~t 158 (171)
T d1obba1 144 KAWYLQAANPIFEGT 158 (171)
T ss_dssp TCEEEECSSCHHHHH
T ss_pred CeEEEEECChHHHHH
Confidence 578999999999973
No 3
>d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=25.78 E-value=13 Score=24.82 Aligned_cols=15 Identities=27% Similarity=0.523 Sum_probs=12.8
Q ss_pred EEEEEeccChHHHhc
Q psy2923 25 KVYLFNVTNREAFLA 39 (141)
Q Consensus 25 ~~y~FNvTN~~evl~ 39 (141)
+-+++|+|||-+++.
T Consensus 139 da~~i~vtNPvdv~t 153 (169)
T d1s6ya1 139 DAWLINFTNPAGMVT 153 (169)
T ss_dssp TCEEEECSSSHHHHH
T ss_pred CeEEEEeCChHHHHH
Confidence 468999999999974
No 4
>d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]}
Probab=24.47 E-value=14 Score=24.37 Aligned_cols=14 Identities=21% Similarity=0.349 Sum_probs=12.4
Q ss_pred EEEEEeccChHHHh
Q psy2923 25 KVYLFNVTNREAFL 38 (141)
Q Consensus 25 ~~y~FNvTN~~evl 38 (141)
+-++.|+|||-+++
T Consensus 132 ~a~~i~vtNPvdii 145 (162)
T d1up7a1 132 NATIVNFTNPSGHI 145 (162)
T ss_dssp CCEEEECSSSHHHH
T ss_pred CeEEEEeCCHHHHH
Confidence 57889999999987
No 5
>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}
Probab=17.80 E-value=23 Score=23.61 Aligned_cols=15 Identities=27% Similarity=0.538 Sum_probs=12.5
Q ss_pred EEEEEeccChHHHhc
Q psy2923 25 KVYLFNVTNREAFLA 39 (141)
Q Consensus 25 ~~y~FNvTN~~evl~ 39 (141)
+-++.|+|||.+++-
T Consensus 139 ~A~li~~TNPvdv~t 153 (167)
T d1u8xx1 139 DAWMLNYSNPAAIVA 153 (167)
T ss_dssp TCEEEECCSCHHHHH
T ss_pred CeEEEEeCCHHHHHH
Confidence 457899999999873
No 6
>d1jnda2 d.26.3.1 (A:279-370) Imaginal disc growth factor-2 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=13.00 E-value=36 Score=20.70 Aligned_cols=10 Identities=30% Similarity=0.614 Sum_probs=7.7
Q ss_pred EEeccEEEEe
Q psy2923 47 QEVGPYVYRE 56 (141)
Q Consensus 47 ~E~GPy~Y~e 56 (141)
+..|||.||.
T Consensus 70 ~~~g~YAyr~ 79 (92)
T d1jnda2 70 KRFGGIAYRP 79 (92)
T ss_dssp CCSCEEEEEC
T ss_pred cceeeeEEec
Confidence 3469999995
No 7
>g1uhe.1 b.52.2.1 (B:,A:) Pyruvoyl dependent aspartate decarboxylase, ADC {Helicobacter pylori [TaxId: 210]}
Probab=12.96 E-value=23 Score=22.97 Aligned_cols=18 Identities=33% Similarity=0.349 Sum_probs=13.8
Q ss_pred ceeEEEEEEeccChHHHh
Q psy2923 21 ELFLKVYLFNVTNREAFL 38 (141)
Q Consensus 21 ~~~~~~y~FNvTN~~evl 38 (141)
-.+-++.+||+||-++|-
T Consensus 38 ~p~E~V~V~N~~NG~Rf~ 55 (121)
T g1uhe.1 38 REGMKVEIVDVNNGERFS 55 (121)
T ss_dssp CTTCEEEEEETTTCCEEE
T ss_pred CCCCEEEEEECCCCeEEE
Confidence 345689999999987763
No 8
>d1ppya_ b.52.2.1 (A:) Pyruvoyl dependent aspartate decarboxylase, ADC {Escherichia coli [TaxId: 562]}
Probab=10.23 E-value=32 Score=22.14 Aligned_cols=18 Identities=28% Similarity=0.335 Sum_probs=13.9
Q ss_pred cceeEEEEEEeccChHHH
Q psy2923 20 VELFLKVYLFNVTNREAF 37 (141)
Q Consensus 20 ~~~~~~~y~FNvTN~~ev 37 (141)
.-.+-++.++|+||-++|
T Consensus 38 i~~~EkV~V~Nv~NG~Rf 55 (118)
T d1ppya_ 38 ILENEAIDIWNVTNGKRF 55 (118)
T ss_dssp CCTTCEEEEEETTTCCEE
T ss_pred CCCCCEEEEEECCCCcEE
Confidence 445668999999997765
No 9
>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}
Probab=8.86 E-value=65 Score=20.31 Aligned_cols=14 Identities=29% Similarity=0.245 Sum_probs=11.4
Q ss_pred EEEEeccChHHHhc
Q psy2923 26 VYLFNVTNREAFLA 39 (141)
Q Consensus 26 ~y~FNvTN~~evl~ 39 (141)
-.+.++|||-+++.
T Consensus 110 aivivvtNPvd~~t 123 (140)
T d1a5za1 110 SIVIVVTNPVDVLT 123 (140)
T ss_dssp CEEEECSSSHHHHH
T ss_pred cEEEEeCCcHHHHH
Confidence 46889999999863
No 10
>d2imqx1 d.151.1.2 (X:3-282) Salivary nitrophorin {Bedbug (Cimex lectularius) [TaxId: 79782]}
Probab=7.42 E-value=2e+02 Score=18.58 Aligned_cols=31 Identities=39% Similarity=0.550 Sum_probs=23.1
Q ss_pred CCcceeEEEEEEec------cChHHHhc---CCCcee-----eEEe
Q psy2923 18 PPVELFLKVYLFNV------TNREAFLA---GKEKLR-----VQEV 49 (141)
Q Consensus 18 pp~~~~~~~y~FNv------TN~~evl~---g~~kp~-----v~E~ 49 (141)
||-++..++--||| .+.+++++ . ..|. +||+
T Consensus 1 p~~~~~v~I~TwNv~~~~~~~~~~~~l~~i~~-~~pDI~vI~lQE~ 45 (280)
T d2imqx1 1 PPAQLSVHTVSWNSGHERAPTNLEELLGLNSG-ETPDVIAVAVQGF 45 (280)
T ss_dssp CCSEEEEEEEEEEEETCCCCSCCHHHHTCTTS-CCCSEEEEEEEES
T ss_pred CCCceEEEEEEECCCCCcCCcCHHHHhccccc-CCCCEEEEEeEec
Confidence 67788888999999 66677873 3 4564 5997
Done!