RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy2923
         (141 letters)



>d2diba1 b.1.18.10 (A:8-122) Filamin b {Human (Homo sapiens)
          [TaxId: 9606]}
          Length = 115

 Score = 26.1 bits (57), Expect = 1.0
 Identities = 12/52 (23%), Positives = 18/52 (34%), Gaps = 5/52 (9%)

Query: 29 FNVTNREAFLAGKEKLRVQEVGPYVYREGMAHVNVSMNDNGT--VTATPIHP 78
          F V +R     G + ++     P           V+ N +GT  V  TP   
Sbjct: 37 FTVDSRPLTQVGGDHIKAHIANPSGAST---ECFVTDNADGTYQVEYTPFEK 85


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.316    0.132    0.376 

Gapped
Lambda     K      H
   0.267   0.0581    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 481,810
Number of extensions: 19692
Number of successful extensions: 39
Number of sequences better than 10.0: 1
Number of HSP's gapped: 39
Number of HSP's successfully gapped: 3
Length of query: 141
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 64
Effective length of database: 1,350,386
Effective search space: 86424704
Effective search space used: 86424704
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 48 (22.6 bits)