BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2929
(131 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 MKEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSK 59
MK ++ A L +R E D L ++HP IV L+ + + +Y+ L++++GGDL ++
Sbjct: 57 MKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTR 116
Query: 60 IEACVKLSEETCKCIVYQIAMALQYLHSL 88
+ V +EE K + ++A+AL +LHSL
Sbjct: 117 LSKEVMFTEEDVKFYLAELALALDHLHSL 145
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 MKEVQNA-LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSK 59
MK ++ A L +R E D L ++HP IV L+ + + +Y+ L++++GGDL ++
Sbjct: 58 MKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTR 117
Query: 60 IEACVKLSEETCKCIVYQIAMALQYLHSL 88
+ V +EE K + ++A+AL +LHSL
Sbjct: 118 LSKEVMFTEEDVKFYLAELALALDHLHSL 146
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 45/70 (64%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
E D L ++HP IV L+ + + +Y+ L++++GGDL +++ V +EE K + ++
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 135
Query: 79 AMALQYLHSL 88
A+AL +LHSL
Sbjct: 136 ALALDHLHSL 145
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 7/85 (8%)
Query: 2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
+E AL+ E E++ LK L+HP I+ + ++ ++ Y+ LE ++GG+L K+
Sbjct: 193 READPALNVET------EIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVV 245
Query: 62 ACVKLSEETCKCIVYQIAMALQYLH 86
+L E TCK YQ+ +A+QYLH
Sbjct: 246 GNKRLKEATCKLYFYQMLLAVQYLH 270
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 7/85 (8%)
Query: 2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
+E AL+ E E++ LK L+HP I+ + ++ ++ Y+ LE ++GG+L K+
Sbjct: 179 READPALNVET------EIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVV 231
Query: 62 ACVKLSEETCKCIVYQIAMALQYLH 86
+L E TCK YQ+ +A+QYLH
Sbjct: 232 GNKRLKEATCKLYFYQMLLAVQYLH 256
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 50/85 (58%), Gaps = 7/85 (8%)
Query: 2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
+E AL+ E E++ LK L+HP I+ + ++ ++ Y+ LE ++GG+L K+
Sbjct: 60 READPALNVET------EIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVV 112
Query: 62 ACVKLSEETCKCIVYQIAMALQYLH 86
+L E TCK YQ+ +A+QYLH
Sbjct: 113 GNKRLKEATCKLYFYQMLLAVQYLH 137
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
E++ LK L+HP I+ + ++ ++ Y+ LE ++GG+L K+ +L E TCK YQ
Sbjct: 64 TEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 78 IAMALQYLH 86
+ +A+QYLH
Sbjct: 123 MLLAVQYLH 131
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
E++ LK L+HP I+ + ++ ++ Y+ LE ++GG+L K+ +L E TCK YQ
Sbjct: 64 TEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 78 IAMALQYLH 86
+ +A+QYLH
Sbjct: 123 MLLAVQYLH 131
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
E++ LK L+HP I+ + ++ ++ Y+ LE ++GG+L K+ +L E TCK YQ
Sbjct: 63 TEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 121
Query: 78 IAMALQYLH 86
+ +A+QYLH
Sbjct: 122 MLLAVQYLH 130
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
E++ LK L+HP I+ + ++ ++ Y+ LE ++GG+L K+ +L E TCK YQ
Sbjct: 64 TEIEILKKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 78 IAMALQYLH 86
+ +A+QYLH
Sbjct: 123 MLLAVQYLH 131
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
E+ NLK HP+I+ LY+ + +I+M +EYV GG+L I +L E+ + + QI
Sbjct: 66 EIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQI 125
Query: 79 AMALQYLHSLMSVNQ 93
+ Y H M V++
Sbjct: 126 LSGVDYCHRHMVVHR 140
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 52.0 bits (123), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 44/70 (62%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
E D L ++HP +V L+ + + +Y+ L++++GGDL +++ V +EE K + ++
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 139
Query: 79 AMALQYLHSL 88
A+ L +LHSL
Sbjct: 140 ALGLDHLHSL 149
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 51.2 bits (121), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 10/114 (8%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGG 54
+K+ + L +NR+ + E+ +K L+HPN+V+ E + D + +EY +GG
Sbjct: 45 IKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGG 104
Query: 55 DLK---SKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVNQH-KPRYIAWKVG 104
DL+ ++ E C L E + ++ I+ AL+YLH +++ KP I + G
Sbjct: 105 DLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPG 158
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 10/114 (8%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGG 54
+K+ + L +NR+ + E+ +K L+HPN+V+ E + D + +EY +GG
Sbjct: 44 IKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGG 103
Query: 55 DLK---SKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVNQH-KPRYIAWKVG 104
DL+ ++ E C L E + ++ I+ AL+YLH +++ KP I + G
Sbjct: 104 DLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPG 157
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
+R+ EV LK + HPN++TL+E K ++ + LE V GG+L + L+EE
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 72 KCIVYQIAMALQYLHSL 88
+ QI + YLHSL
Sbjct: 117 TEFLKQILNGVYYLHSL 133
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
+R+ EV LK + HPN++TL+E K ++ + LE V GG+L + L+EE
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 72 KCIVYQIAMALQYLHSL 88
+ QI + YLHSL
Sbjct: 117 TEFLKQILNGVYYLHSL 133
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Query: 7 ALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN--IYMFLEYVQGGDLKSKIEACV 64
++ + ++ +EV+ L+ L HPNIV Y+ ++ + N +Y+ +EY +GGDL S I
Sbjct: 43 SMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGT 102
Query: 65 K----LSEETCKCIVYQIAMALQYLHSLMSVNQHKPRYIAWKVGSILAGGK 111
K L EE ++ Q+ +AL+ H S H + K ++ GK
Sbjct: 103 KERQYLDEEFVLRVMTQLTLALKECHR-RSDGGHTVLHRDLKPANVFLDGK 152
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
+R+ EV LK + HPN++TL+E K ++ + LE V GG+L + L+EE
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 72 KCIVYQIAMALQYLHSL 88
+ QI + YLHSL
Sbjct: 117 TEFLKQILNGVYYLHSL 133
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
EV +K L+HPNIV L+E + + +Y+ +EY GG++ + A ++ E+ + QI
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 79 AMALQYLHSLMSVNQ 93
A+QY H V++
Sbjct: 123 VSAVQYCHQKFIVHR 137
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Query: 7 ALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN--IYMFLEYVQGGDLKSKIEACV 64
++ + ++ +EV+ L+ L HPNIV Y+ ++ + N +Y+ +EY +GGDL S I
Sbjct: 43 SMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGT 102
Query: 65 K----LSEETCKCIVYQIAMALQYLHSLMSVNQHKPRYIAWKVGSILAGGK 111
K L EE ++ Q+ +AL+ H S H + K ++ GK
Sbjct: 103 KERQYLDEEFVLRVMTQLTLALKECHR-RSDGGHTVLHRDLKPANVFLDGK 152
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
+R+ EV LK + HPN++TL+E K ++ + LE V GG+L + L+EE
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 72 KCIVYQIAMALQYLHSL 88
+ QI + YLHSL
Sbjct: 117 TEFLKQILNGVYYLHSL 133
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
+R+ EV LK + HPN++TL+E K ++ + LE V GG+L + L+EE
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 72 KCIVYQIAMALQYLHSL 88
+ QI + YLHSL
Sbjct: 117 TEFLKQILNGVYYLHSL 133
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
EV +K L+HPNIV L+E + + +Y+ +EY GG++ + A ++ E+ + QI
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 79 AMALQYLHSLMSVNQ 93
A+QY H V++
Sbjct: 123 VSAVQYCHQKFIVHR 137
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 7/111 (6%)
Query: 7 ALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDN--IYMFLEYVQGGDLKSKIEACV 64
++ + ++ +EV+ L+ L HPNIV Y+ ++ + N +Y+ +EY +GGDL S I
Sbjct: 43 SMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGT 102
Query: 65 K----LSEETCKCIVYQIAMALQYLHSLMSVNQHKPRYIAWKVGSILAGGK 111
K L EE ++ Q+ +AL+ H S H + K ++ GK
Sbjct: 103 KERQYLDEEFVLRVMTQLTLALKECHR-RSDGGHTVLHRDLKPANVFLDGK 152
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
EV +K L+HPNIV L+E + + +Y+ +EY GG++ + A ++ E+ + QI
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 79 AMALQYLHSLMSVNQ 93
A+QY H V++
Sbjct: 123 VSAVQYCHQKFIVHR 137
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
+R+ EV LK + HPN++TL+E K ++ + LE V GG+L + L+EE
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 72 KCIVYQIAMALQYLHSL 88
+ QI + YLHSL
Sbjct: 117 TEFLKQILNGVYYLHSL 133
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
EV +K L+HPNIV L+E + + +Y+ +EY GG++ + A ++ E+ + QI
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 79 AMALQYLHSLMSVNQ 93
A+QY H V++
Sbjct: 123 VSAVQYCHQKFIVHR 137
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
+R+ EV LK + HPN++TL+E K ++ + LE V GG+L + L+EE
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 72 KCIVYQIAMALQYLHSL 88
+ QI + YLHSL
Sbjct: 117 TEFLKQILNGVYYLHSL 133
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
EV +K L+HPNIV L+E + + +Y+ +EY GG++ + A ++ E+ + QI
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 122
Query: 79 AMALQYLHSLMSVNQ 93
A+QY H V++
Sbjct: 123 VSAVQYCHQKFIVHR 137
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
+R+ EV LK + HPN++TL+E K ++ + LE V GG+L + L+EE
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 72 KCIVYQIAMALQYLHSL 88
+ QI + YLHSL
Sbjct: 117 TEFLKQILNGVYYLHSL 133
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
+R+ EV LK + HPN++TL+E K ++ + LE V GG+L + L+EE
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 72 KCIVYQIAMALQYLHSL 88
+ QI + YLHSL
Sbjct: 117 TEFLKQILNGVYYLHSL 133
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
+R+ EV LK + HPN++TL+E K ++ + LE V GG+L + L+EE
Sbjct: 56 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 115
Query: 72 KCIVYQIAMALQYLHSL 88
+ QI + YLHSL
Sbjct: 116 TEFLKQILNGVYYLHSL 132
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
+R+ EV LK + HPN++TL+E K ++ + LE V GG+L + L+EE
Sbjct: 56 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 115
Query: 72 KCIVYQIAMALQYLHSL 88
+ QI + YLHSL
Sbjct: 116 TEFLKQILNGVYYLHSL 132
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
+R+ EV LK + HPN++TL+E K ++ + LE V GG+L + L+EE
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 72 KCIVYQIAMALQYLHSL 88
+ QI + YLHSL
Sbjct: 117 TEFLKQILNGVYYLHSL 133
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
E++ LK+L H +I LY + + I+M LEY GG+L I + +LSEE + + Q
Sbjct: 57 TEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQ 116
Query: 78 IAMALQYLHS 87
I A+ Y+HS
Sbjct: 117 IVSAVAYVHS 126
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%)
Query: 12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
+R+ EV LK + HPN++TL+E K ++ + LE V GG+L + L+EE
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEA 116
Query: 72 KCIVYQIAMALQYLHSL 88
+ QI + YLHSL
Sbjct: 117 TEFLKQILNGVYYLHSL 133
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
E+ NLK HP+I+ LY+ + + +M +EYV GG+L I ++ E + + Q
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQ 119
Query: 78 IAMALQYLHSLMSVNQ 93
I A+ Y H M V++
Sbjct: 120 ILSAVDYCHRHMVVHR 135
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
E+ NLK HP+I+ LY+ + + +M +EYV GG+L I ++ E + + Q
Sbjct: 60 REIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQ 119
Query: 78 IAMALQYLHSLMSVNQ 93
I A+ Y H M V++
Sbjct: 120 ILSAVDYCHRHMVVHR 135
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
EV +K L+HPNIV L+E + + +Y+ +EY GG++ + A ++ E+ + QI
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI 123
Query: 79 AMALQYLH 86
A+QY H
Sbjct: 124 VSAVQYCH 131
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
EV +K L+HPNIV L+E + + +Y+ +EY GG++ + A ++ E+ + QI
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI 120
Query: 79 AMALQYLH 86
A+QY H
Sbjct: 121 VSAVQYCH 128
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
EV +K L+HPNIV L+E + + +Y+ +EY GG++ + A ++ E+ + QI
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI 123
Query: 79 AMALQYLH 86
A+QY H
Sbjct: 124 VSAVQYCH 131
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
+R+ EV+ L+ + HPNI+TL++ K ++ + LE V GG+L + L+E+
Sbjct: 72 SREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEA 131
Query: 72 KCIVYQIAMALQYLHS 87
+ QI + YLHS
Sbjct: 132 TQFLKQILDGVHYLHS 147
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
++ R+ NEV ++ H N+V +Y+S L + +++ +E++QGG L + I + V+L+EE
Sbjct: 83 QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGAL-TDIVSQVRLNEE 141
Query: 70 TCKCIVYQIAMALQYLHS 87
+ + AL YLH+
Sbjct: 142 QIATVCEAVLQALAYLHA 159
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
+R+ EV+ L+ + HPNI+TL++ K ++ + LE V GG+L + L+E+
Sbjct: 51 SREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEA 110
Query: 72 KCIVYQIAMALQYLHS 87
+ QI + YLHS
Sbjct: 111 TQFLKQILDGVHYLHS 126
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%)
Query: 12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
+R+ EV+ L+ + HPNI+TL++ K ++ + LE V GG+L + L+E+
Sbjct: 58 SREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEA 117
Query: 72 KCIVYQIAMALQYLHS 87
+ QI + YLHS
Sbjct: 118 TQFLKQILDGVHYLHS 133
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 48.9 bits (115), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EY+ GGD+ S + + SE + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EY+ GGD+ S + + SE + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 38/75 (50%)
Query: 12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
N +EV LK L HPNI+ LYE K N Y+ +E +GG+L +I K SE
Sbjct: 47 NSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDA 106
Query: 72 KCIVYQIAMALQYLH 86
I+ Q+ YLH
Sbjct: 107 AVIMKQVLSGTTYLH 121
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 38/75 (50%)
Query: 12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
N +EV LK L HPNI+ LYE K N Y+ +E +GG+L +I K SE
Sbjct: 64 NSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDA 123
Query: 72 KCIVYQIAMALQYLH 86
I+ Q+ YLH
Sbjct: 124 AVIMKQVLSGTTYLH 138
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEET 70
E+ F E++ +KSL HPNI+ LYE+ +IY+ +E GG+L ++ E
Sbjct: 65 EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESD 124
Query: 71 CKCIVYQIAMALQYLHSL 88
I+ + A+ Y H L
Sbjct: 125 AARIMKDVLSAVAYCHKL 142
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
E+ N +SL HPNIV E +L ++ + +EY GG+L +I + SE+ + Q+
Sbjct: 66 EIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQL 125
Query: 79 AMALQYLHSL 88
+ Y HS+
Sbjct: 126 LSGVSYCHSM 135
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%)
Query: 11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEET 70
E+ F E++ +KSL HPNI+ LYE+ +IY+ +E GG+L ++ E
Sbjct: 48 EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESD 107
Query: 71 CKCIVYQIAMALQYLHSL 88
I+ + A+ Y H L
Sbjct: 108 AARIMKDVLSAVAYCHKL 125
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 42/69 (60%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
E+ ++ L HP +V L+ S +++++M ++ + GGDL+ ++ V EET K + ++
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICEL 124
Query: 79 AMALQYLHS 87
MAL YL +
Sbjct: 125 VMALDYLQN 133
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 170
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 171 IVLTFEYLHSL 181
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
R+ EV L+ + HPNI+TL++ + ++ + LE V GG+L + LSEE
Sbjct: 59 REEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEAT 118
Query: 73 CIVYQIAMALQYLHS 87
+ QI + YLH+
Sbjct: 119 SFIKQILDGVNYLHT 133
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 151 IVLTFEYLHSL 161
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 151 IVLTFEYLHSL 161
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 151 IVLTFEYLHSL 161
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
E+ N +SL HPNIV E +L ++ + +EY GG+L +I + SE+ + Q+
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 124
Query: 79 AMALQYLHSL 88
+ Y H++
Sbjct: 125 ISGVSYAHAM 134
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 151 IVLTFEYLHSL 161
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 151 IVLTFEYLHSL 161
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 170
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 171 IVLTFEYLHSL 181
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 151 IVLTFEYLHSL 161
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 83 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 142
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 143 IVLTFEYLHSL 153
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 77 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 136
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 137 IVLTFEYLHSL 147
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + SE + Q
Sbjct: 76 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 135
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 136 IVLTFEYLHSL 146
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
EV +K L+HPNIV L+E + + +Y+ +EY GG++ + A + E+ + QI
Sbjct: 56 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQI 115
Query: 79 AMALQYLHSLMSVNQ 93
A+QY H V++
Sbjct: 116 VSAVQYCHQKFIVHR 130
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
++ R+ NEV ++ H N+V +Y S L D +++ +E+++GG L + I +++EE
Sbjct: 83 QQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGAL-TDIVTHTRMNEE 141
Query: 70 TCKCIVYQIAMALQYLH 86
+ + AL YLH
Sbjct: 142 QIATVCLSVLRALSYLH 158
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%)
Query: 12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
+R+ EV LK + HPN++TL+E K ++ + E V GG+L + L+EE
Sbjct: 57 SREDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEA 116
Query: 72 KCIVYQIAMALQYLHSL 88
+ QI + YLHSL
Sbjct: 117 TEFLKQILNGVYYLHSL 133
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
E+ N +SL HPNIV E +L ++ + +EY GG+L +I + SE+ + Q+
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 124
Query: 79 AMALQYLHSL 88
+ Y H++
Sbjct: 125 ISGVSYCHAM 134
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
E+ N +SL HPNIV E +L ++ + +EY GG+L +I + SE+ + Q+
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 124
Query: 79 AMALQYLHSL 88
+ Y H++
Sbjct: 125 ISGVSYCHAM 134
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
E+ N +SL HPNIV E +L ++ + +EY GG+L +I + SE+ + Q+
Sbjct: 64 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 123
Query: 79 AMALQYLHSL 88
+ Y H++
Sbjct: 124 ISGVSYCHAM 133
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
E+ N +SL HPNIV E +L ++ + +EY GG+L +I + SE+ + Q+
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 124
Query: 79 AMALQYLHSL 88
+ Y H++
Sbjct: 125 ISGVSYCHAM 134
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
EV K L+HPNIV L+E + + +Y+ EY GG++ + A + E+ + QI
Sbjct: 63 EVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQI 122
Query: 79 AMALQYLHSLMSVNQ 93
A+QY H V++
Sbjct: 123 VSAVQYCHQKFIVHR 137
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
++V+ DKE+ EV LK L HPNI+ LYE K Y+ E GG+L +I
Sbjct: 68 RQVKQKTDKES---LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII 124
Query: 62 ACVKLSEETCKCIVYQIAMALQYLH 86
+ + SE I+ Q+ + Y+H
Sbjct: 125 SRKRFSEVDAARIIRQVLSGITYMH 149
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
+KE+++ L NE L++++ P +V L S N+YM +EY GG++ S +
Sbjct: 82 LKEIEHTL---------NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 132
Query: 61 EACVKLSEETCKCIVYQIAMALQYLHSL 88
+ SE + QI + +YLHSL
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 9/88 (10%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
+KE+++ L NE L++++ P +V L S N+YM +EY GG++ S +
Sbjct: 82 LKEIEHTL---------NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL 132
Query: 61 EACVKLSEETCKCIVYQIAMALQYLHSL 88
+ SE + QI + +YLHSL
Sbjct: 133 RRIGRFSEPHARFYAAQIVLTFEYLHSL 160
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + +E + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
++V+ DKE+ EV LK L HPNI+ LYE K Y+ E GG+L +I
Sbjct: 86 RQVKQKTDKES---LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII 142
Query: 62 ACVKLSEETCKCIVYQIAMALQYLH 86
+ + SE I+ Q+ + Y+H
Sbjct: 143 SRKRFSEVDAARIIRQVLSGITYMH 167
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 46.6 bits (109), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
++V+ DKE+ EV LK L HPNI+ LYE K Y+ E GG+L +I
Sbjct: 85 RQVKQKTDKES---LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII 141
Query: 62 ACVKLSEETCKCIVYQIAMALQYLH 86
+ + SE I+ Q+ + Y+H
Sbjct: 142 SRKRFSEVDAARIIRQVLSGITYMH 166
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EY GG++ S + + SE + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EY GG++ S + + SE + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EY GG++ S + + SE + Q
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 151 IVLTFEYLHSL 161
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
++V+ DKE+ EV LK L HPNI+ LYE K Y+ E GG+L +I
Sbjct: 62 RQVKQKTDKES---LLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEII 118
Query: 62 ACVKLSEETCKCIVYQIAMALQYLH 86
+ + SE I+ Q+ + Y+H
Sbjct: 119 SRKRFSEVDAARIIRQVLSGITYMH 143
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + E + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + E + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + E + Q
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ 150
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 151 IVLTFEYLHSL 161
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + E + Q
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ 170
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 171 IVLTFEYLHSL 181
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Query: 10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
+E K F EV N LSH NIV++ + D Y+ +EY++G L IE+ LS +
Sbjct: 52 EETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVD 111
Query: 70 TCKCIVYQIAMALQYLHSLMSVNQH-KPRYI 99
T QI +++ H + V++ KP+ I
Sbjct: 112 TAINFTNQILDGIKHAHDMRIVHRDIKPQNI 142
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 38/68 (55%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
EV LK L HPNI+ LY+ K N Y+ +E +GG+L +I +K +E I+ Q+
Sbjct: 86 EVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQV 145
Query: 79 AMALQYLH 86
+ YLH
Sbjct: 146 LSGVTYLH 153
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + E + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + E + Q
Sbjct: 83 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ 142
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 143 IVLTFEYLHSL 153
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + E + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + E + Q
Sbjct: 85 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ 144
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 145 IVLTFEYLHSL 155
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 46.2 bits (108), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
++ R+ NEV ++ H N+V +Y S L D +++ +E+++GG L + I +++EE
Sbjct: 189 QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL-TDIVTHTRMNEE 247
Query: 70 TCKCIVYQIAMALQYLHS 87
+ + AL LH+
Sbjct: 248 QIAAVCLAVLQALSVLHA 265
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EYV GG++ S + + E + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE+ LKSL HPNI+ L++ K Y+ E+ +GG+L +I K E I+ Q
Sbjct: 95 NEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQ 154
Query: 78 IAMALQYLHSLMSVNQH-KPRYI 99
I + YLH V++ KP I
Sbjct: 155 ILSGICYLHKHNIVHRDIKPENI 177
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----KLSEETCKCI 74
E++ LKSL HPNI+ ++E N+Y+ +E +GG+L +I + LSE +
Sbjct: 70 EIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAEL 129
Query: 75 VYQIAMALQYLHSLMSVNQH-KPRYIAWKVGS 105
+ Q+ AL Y HS V++ KP I ++ S
Sbjct: 130 MKQMMNALAYFHSQHVVHKDLKPENILFQDTS 161
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 28 HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
HP + ++ + K+N++ +EY+ GGDL I++C K +I + LQ+LHS
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHS 136
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
++ R+ NEV ++ H N+V +Y S L D +++ +E+++GG L + I +++EE
Sbjct: 112 QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL-TDIVTHTRMNEE 170
Query: 70 TCKCIVYQIAMALQYLHS 87
+ + AL LH+
Sbjct: 171 QIAAVCLAVLQALSVLHA 188
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
+K + L + + F E LK SHPNIV L K IY+ +E VQGGD + +
Sbjct: 144 VKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL 203
Query: 61 EA-CVKLSEETCKCIVYQIAMALQYLHS 87
+L +T +V A ++YL S
Sbjct: 204 RTEGARLRVKTLLQMVGDAAAGMEYLES 231
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
+K + L + + F E LK SHPNIV L K IY+ +E VQGGD + +
Sbjct: 144 VKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL 203
Query: 61 EA-CVKLSEETCKCIVYQIAMALQYLHS 87
+L +T +V A ++YL S
Sbjct: 204 RTEGARLRVKTLLQMVGDAAAGMEYLES 231
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 27 SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH 86
HP + ++ + K+N++ +EY+ GGDL I++C K +I + LQ+LH
Sbjct: 77 EHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH 136
Query: 87 S 87
S
Sbjct: 137 S 137
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS-KIEACVKLSEETCKCIVYQ 77
E+D L S HPNIV L ++ +++N+++ +E+ GG + + +E L+E + + Q
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 78 IAMALQYLHS 87
AL YLH
Sbjct: 144 TLDALNYLHD 153
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS-KIEACVKLSEETCKCIVYQ 77
E+D L S HPNIV L ++ +++N+++ +E+ GG + + +E L+E + + Q
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 78 IAMALQYLHS 87
AL YLH
Sbjct: 144 TLDALNYLHD 153
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P + L S N+YM +EY GG++ S + + SE + Q
Sbjct: 91 NEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 151 IVLTFEYLHSL 161
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS-KIEACVKLSEETCKCIVYQ 77
E+D L S HPNIV L ++ +++N+++ +E+ GG + + +E L+E + + Q
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 78 IAMALQYLHS 87
AL YLH
Sbjct: 144 TLDALNYLHD 153
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
++ R+ NEV ++ H N+V +Y S L D +++ +E+++GG L + I +++EE
Sbjct: 62 QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL-TDIVTHTRMNEE 120
Query: 70 TCKCIVYQIAMALQYLHS 87
+ + AL LH+
Sbjct: 121 QIAAVCLAVLQALSVLHA 138
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS-KIEACVKLSEETCKCIVYQ 77
E+D L S HPNIV L ++ +++N+++ +E+ GG + + +E L+E + + Q
Sbjct: 57 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 116
Query: 78 IAMALQYLHS 87
AL YLH
Sbjct: 117 TLDALNYLHD 126
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
++ R+ NEV ++ H N+V +Y S L D +++ +E+++GG L + I +++EE
Sbjct: 58 QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL-TDIVTHTRMNEE 116
Query: 70 TCKCIVYQIAMALQYLHS 87
+ + AL LH+
Sbjct: 117 QIAAVCLAVLQALSVLHA 134
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
++ R+ NEV ++ H N+V +Y S L D +++ +E+++GG L + I +++EE
Sbjct: 67 QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL-TDIVTHTRMNEE 125
Query: 70 TCKCIVYQIAMALQYLHS 87
+ + AL LH+
Sbjct: 126 QIAAVCLAVLQALSVLHA 143
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Query: 10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
++ R+ NEV ++ H N+V +Y S L D +++ +E+++GG L + I +++EE
Sbjct: 69 QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL-TDIVTHTRMNEE 127
Query: 70 TCKCIVYQIAMALQYLHS 87
+ + AL LH+
Sbjct: 128 QIAAVCLAVLQALSVLHA 145
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P + L S N+YM +EY GG++ S + + SE + Q
Sbjct: 91 NEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 151 IVLTFEYLHSL 161
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE ++++ P +V L S N+YM LEY GG++ S + + SE + Q
Sbjct: 91 NEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 151 IVLTFEYLHSL 161
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 1 MKEVQ--NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K+VQ + +D + R E+D LK L+HPN++ Y S + + + + LE GDL
Sbjct: 62 LKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSR 121
Query: 59 KIEACVK----LSEETCKCIVYQIAMALQYLHS 87
I+ K + E T Q+ AL+++HS
Sbjct: 122 MIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS 154
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P +V L S N+YM +EY GG++ S + + E + Q
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 150 IVLTFEYLHSL 160
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 4/81 (4%)
Query: 9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSK-IEACVKLS 67
DKE K NE+ + L H N++ LY++ K++I + +EYV GG+L + I+ L+
Sbjct: 129 DKEEVK---NEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLT 185
Query: 68 EETCKCIVYQIAMALQYLHSL 88
E + QI ++++H +
Sbjct: 186 ELDTILFMKQICEGIRHMHQM 206
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
E++ L HPNI+ LY + IY+ LEY G+L +++ E+ I+ +
Sbjct: 72 REIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEE 131
Query: 78 IAMALQYLH 86
+A AL Y H
Sbjct: 132 LADALMYCH 140
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Query: 8 LDKENRKYFANEVDNL-KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKL 66
L K+ K+ +E + L K++ HP +V L+ S D +Y L+Y+ GG+L ++
Sbjct: 77 LKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCF 136
Query: 67 SEETCKCIVYQIAMALQYLHSL 88
E + +IA AL YLHSL
Sbjct: 137 LEPRARFYAAEIASALGYLHSL 158
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 44.3 bits (103), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Query: 2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
++V+ DKE+ EV LK L HPNI LYE K Y+ E GG+L +I
Sbjct: 62 RQVKQKTDKES---LLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEII 118
Query: 62 ACVKLSEETCKCIVYQIAMALQYLH 86
+ + SE I+ Q+ + Y H
Sbjct: 119 SRKRFSEVDAARIIRQVLSGITYXH 143
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 27 SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH 86
+HP +V L+ + ++ +EYV GGDL ++ KL EE + +I++AL YLH
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 127
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 27 SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH 86
+HP +V L+ + ++ +EYV GGDL ++ KL EE + +I++AL YLH
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 123
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 27 SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH 86
+HP +V L+ + ++ +EYV GGDL ++ KL EE + +I++AL YLH
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 138
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 27 SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH 86
+HP +V L+ + ++ +EYV GGDL ++ KL EE + +I++AL YLH
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH 170
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 36/65 (55%)
Query: 23 LKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMAL 82
L ++HP I+ ++ + I+M ++Y++GG+L S + + K ++ +AL
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLAL 119
Query: 83 QYLHS 87
+YLHS
Sbjct: 120 EYLHS 124
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE+ L + HPNIV L + ++Y+ ++ V GG+L +I +E +++Q
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQ 124
Query: 78 IAMALQYLHSLMSVNQ 93
+ A++YLH L V++
Sbjct: 125 VLDAVKYLHDLGIVHR 140
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G++ +++ K E+ + +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE 121
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 122 LANALSYCHS 131
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
+R+ EV L+ + H N++TL++ + ++ + LE V GG+L + LSEE
Sbjct: 58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
Query: 72 KCIVYQIAMALQYLHS 87
+ QI + YLH+
Sbjct: 118 TSFIKQILDGVNYLHT 133
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
K+V D + R E+ L+ L HP+I+ LY+ + KD I M +EY G +L I
Sbjct: 39 KKVLAKSDMQGR--IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIV 95
Query: 62 ACVKLSEETCKCIVYQIAMALQYLH 86
K+SE+ + QI A++Y H
Sbjct: 96 QRDKMSEQEARRFFQQIISAVEYCH 120
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
E+ L+ L HP+I+ LY+ + KD I M +EY G +L I K+SE+ + QI
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQI 122
Query: 79 AMALQYLH 86
A++Y H
Sbjct: 123 ISAVEYCH 130
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
E+ L+ L HP+I+ LY+ + KD I M +EY G +L I K+SE+ + QI
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQI 121
Query: 79 AMALQYLH 86
A++Y H
Sbjct: 122 ISAVEYCH 129
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
K+V D + R E+ L+ L HP+I+ LY+ + KD I M +EY G +L I
Sbjct: 43 KKVLAKSDMQGR--IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIV 99
Query: 62 ACVKLSEETCKCIVYQIAMALQYLH 86
K+SE+ + QI A++Y H
Sbjct: 100 QRDKMSEQEARRFFQQIISAVEYCH 124
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
+R+ EV L+ + H N++TL++ + ++ + LE V GG+L + LSEE
Sbjct: 58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
Query: 72 KCIVYQIAMALQYLHS 87
+ QI + YLH+
Sbjct: 118 TSFIKQILDGVNYLHT 133
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
+R+ EV L+ + H N++TL++ + ++ + LE V GG+L + LSEE
Sbjct: 58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
Query: 72 KCIVYQIAMALQYLHS 87
+ QI + YLH+
Sbjct: 118 TSFIKQILDGVNYLHT 133
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
+R+ EV L+ + H N++TL++ + ++ + LE V GG+L + LSEE
Sbjct: 58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
Query: 72 KCIVYQIAMALQYLHS 87
+ QI + YLH+
Sbjct: 118 TSFIKQILDGVNYLHT 133
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G++ +++ K E+ + +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE 121
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 122 LANALSYCHS 131
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE+ L + HPNIV L + ++Y+ ++ V GG+L +I +E +++Q
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQ 124
Query: 78 IAMALQYLHSLMSVNQ 93
+ A++YLH L V++
Sbjct: 125 VLDAVKYLHDLGIVHR 140
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%)
Query: 12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
+R+ EV L+ + H N++TL++ + ++ + LE V GG+L + LSEE
Sbjct: 58 SREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEA 117
Query: 72 KCIVYQIAMALQYLHS 87
+ QI + YLH+
Sbjct: 118 TSFIKQILDGVNYLHT 133
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE+ L + HPNIV L + ++Y+ ++ V GG+L +I +E +++Q
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQ 124
Query: 78 IAMALQYLHSLMSVNQ 93
+ A++YLH L V++
Sbjct: 125 VLDAVKYLHDLGIVHR 140
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE+ L + HPNIV L + ++Y+ ++ V GG+L +I +E +++Q
Sbjct: 65 NEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQ 124
Query: 78 IAMALQYLHSLMSVNQ 93
+ A++YLH L V++
Sbjct: 125 VLDAVKYLHDLGIVHR 140
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 9/111 (8%)
Query: 8 LDKENRKYFANEVDNLKSLSHPNIVTLYES----VLWKDNIYMFLEYVQGGDLKSKIEAC 63
L K R+ F E + LK L HPNIV Y+S V K I + E G LK+ ++
Sbjct: 64 LTKSERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRF 123
Query: 64 VKLSEETCKCIVYQIAMALQYLHSLMSVNQHKPR-----YIAWKVGSILAG 109
+ + QI LQ+LH+ H+ +I GS+ G
Sbjct: 124 KVXKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIG 174
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 1 MKEVQ-NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSK 59
+KE+ + + + R+ EV L ++ HPNIV ES ++Y+ ++Y +GGDL +
Sbjct: 54 IKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKR 113
Query: 60 IEA--CVKLSEETCKCIVYQIAMALQYLH 86
I A V E+ QI +AL+++H
Sbjct: 114 INAQKGVLFQEDQILDWFVQICLALKHVH 142
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE L++++ P + L S N+YM +EY GG++ S + + E + Q
Sbjct: 91 NEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQ 150
Query: 78 IAMALQYLHSL 88
I + +YLHSL
Sbjct: 151 IVLTFEYLHSL 161
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 4 VQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC 63
V+NA D + K E + L+ + HP IV L + +Y+ LEY+ GG+L ++E
Sbjct: 59 VRNAKDTAHTK---AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE 115
Query: 64 VKLSEETCKCIVYQIAMALQYLH 86
E+T + +I+MAL +LH
Sbjct: 116 GIFMEDTACFYLAEISMALGHLH 138
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 4 VQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC 63
V+NA D + K E + L+ + HP IV L + +Y+ LEY+ GG+L ++E
Sbjct: 59 VRNAKDTAHTK---AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE 115
Query: 64 VKLSEETCKCIVYQIAMALQYLH 86
E+T + +I+MAL +LH
Sbjct: 116 GIFMEDTACFYLAEISMALGHLH 138
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 36/75 (48%)
Query: 12 NRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETC 71
++K E+ L LSHPNI+ L E I + LE V GG+L +I SE
Sbjct: 91 DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDA 150
Query: 72 KCIVYQIAMALQYLH 86
V QI A+ YLH
Sbjct: 151 ADAVKQILEAVAYLH 165
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24 KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
K L+H N+V Y + Y+FLEY GG+L +IE + + E + +Q+ +
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 84 YLHSL 88
YLH +
Sbjct: 120 YLHGI 124
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24 KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
K L+H N+V Y + Y+FLEY GG+L +IE + + E + +Q+ +
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 84 YLHSL 88
YLH +
Sbjct: 119 YLHGI 123
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24 KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
K L+H N+V Y + Y+FLEY GG+L +IE + + E + +Q+ +
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 84 YLHSL 88
YLH +
Sbjct: 119 YLHGI 123
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24 KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
K L+H N+V Y + Y+FLEY GG+L +IE + + E + +Q+ +
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 84 YLHSL 88
YLH +
Sbjct: 120 YLHGI 124
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24 KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
K L+H N+V Y + Y+FLEY GG+L +IE + + E + +Q+ +
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 84 YLHSL 88
YLH +
Sbjct: 119 YLHGI 123
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24 KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
K L+H N+V Y + Y+FLEY GG+L +IE + + E + +Q+ +
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 84 YLHSL 88
YLH +
Sbjct: 120 YLHGI 124
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24 KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
K L+H N+V Y + Y+FLEY GG+L +IE + + E + +Q+ +
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 84 YLHSL 88
YLH +
Sbjct: 120 YLHGI 124
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24 KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
K L+H N+V Y + Y+FLEY GG+L +IE + + E + +Q+ +
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 84 YLHSL 88
YLH +
Sbjct: 120 YLHGI 124
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24 KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
K L+H N+V Y + Y+FLEY GG+L +IE + + E + +Q+ +
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 84 YLHSL 88
YLH +
Sbjct: 119 YLHGI 123
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24 KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
K L+H N+V Y + Y+FLEY GG+L +IE + + E + +Q+ +
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 84 YLHSL 88
YLH +
Sbjct: 119 YLHGI 123
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
E+ LK L HP+I+ LY+ + +I M +EY GG+L I +++E+ + QI
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQI 117
Query: 79 AMALQYLH 86
A++Y H
Sbjct: 118 ICAIEYCH 125
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24 KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
K L+H N+V Y + Y+FLEY GG+L +IE + + E + +Q+ +
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 84 YLHSL 88
YLH +
Sbjct: 119 YLHGI 123
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24 KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
K L+H N+V Y + Y+FLEY GG+L +IE + + E + +Q+ +
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 84 YLHSL 88
YLH +
Sbjct: 119 YLHGI 123
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24 KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
K L+H N+V Y + Y+FLEY GG+L +IE + + E + +Q+ +
Sbjct: 58 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 117
Query: 84 YLHSL 88
YLH +
Sbjct: 118 YLHGI 122
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24 KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
K L+H N+V Y + Y+FLEY GG+L +IE + + E + +Q+ +
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 84 YLHSL 88
YLH +
Sbjct: 119 YLHGI 123
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFL-EYVQGGDLKSK 59
MKE+ D+E ++ F EV ++ L HPN++ + VL+KD F+ EY++GG L+
Sbjct: 40 MKELIR-FDEETQRTFLKEVKVMRCLEHPNVLK-FIGVLYKDKRLNFITEYIKGGTLRGI 97
Query: 60 IEACVKLSEETCKC-IVYQIAMALQYLHSL 88
I++ + + IA + YLHS+
Sbjct: 98 IKSMDSQYPWSQRVSFAKDIASGMAYLHSM 127
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24 KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
K L+H N+V Y + Y+FLEY GG+L +IE + + E + +Q+ +
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 84 YLHSL 88
YLH +
Sbjct: 119 YLHGI 123
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24 KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
K L+H N+V Y + Y+FLEY GG+L +IE + + E + +Q+ +
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 84 YLHSL 88
YLH +
Sbjct: 119 YLHGI 123
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24 KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
K L+H N+V Y + Y+FLEY GG+L +IE + + E + +Q+ +
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 84 YLHSL 88
YLH +
Sbjct: 120 YLHGI 124
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24 KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
K L+H N+V Y + Y+FLEY GG+L +IE + + E + +Q+ +
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 84 YLHSL 88
YLH +
Sbjct: 119 YLHGI 123
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24 KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
K L+H N+V Y + Y+FLEY GG+L +IE + + E + +Q+ +
Sbjct: 59 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 118
Query: 84 YLHSL 88
YLH +
Sbjct: 119 YLHGI 123
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 24 KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
K L+H N+V Y + Y+FLEY GG+L +IE + + E + +Q+ +
Sbjct: 60 KMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVV 119
Query: 84 YLHSL 88
YLH +
Sbjct: 120 YLHGI 124
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 117 LANALSYCHS 126
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 117 LANALSYCHS 126
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 120 LANALSYCHS 129
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + +
Sbjct: 61 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 120
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 121 LANALSYCHS 130
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
EV+ LK L HPNI+ L+E + + Y+ E GG+L +I + SE I+ Q+
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQV 130
Query: 79 AMALQYLH 86
+ Y+H
Sbjct: 131 FSGITYMH 138
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 5 QNALDKENRKY-FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC 63
++ L+KE ++ E++ L HPNI+ +Y + IY+ LE+ G+L +++
Sbjct: 50 KSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH 109
Query: 64 VKLSEETCKCIVYQIAMALQYLH 86
+ E+ + ++A AL Y H
Sbjct: 110 GRFDEQRSATFMEELADALHYCH 132
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + +
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 118 LANALSYCHS 127
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 120 LANALSYCHS 129
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + +
Sbjct: 56 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 115
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 116 LANALSYCHS 125
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
EV+ LK L HPNI+ L+E + + Y+ E GG+L +I + SE I+ Q+
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQV 130
Query: 79 AMALQYLH 86
+ Y+H
Sbjct: 131 FSGITYMH 138
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 117 LANALSYCHS 126
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 117 LANALSYCHS 126
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 120 LANALSYCHS 129
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + +
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 118
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 119 LANALSYCHS 128
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 120 LANALSYCHS 129
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 120 LANALSYCHS 129
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + +
Sbjct: 54 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 113
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 114 LANALSYCHS 123
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 122 LANALSYCHS 131
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 122 LANALSYCHS 131
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10 KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
KEN+ Y E D + L HP V LY + + +Y L Y + G+L I E
Sbjct: 72 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 131
Query: 69 ETCKCIVYQIAMALQYLHS 87
+ +I AL+YLH
Sbjct: 132 TCTRFYTAEIVSALEYLHG 150
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 117 LANALSYCHS 126
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 5 QNALDKENRKY-FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC 63
++ L+KE ++ E++ L HPNI+ +Y + IY+ LE+ G+L +++
Sbjct: 49 KSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH 108
Query: 64 VKLSEETCKCIVYQIAMALQYLH 86
+ E+ + ++A AL Y H
Sbjct: 109 GRFDEQRSATFMEELADALHYCH 131
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 117 LANALSYCHS 126
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 5 QNALDKENRKY-FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC 63
++ L+KE ++ E++ L HPNI+ +Y + IY+ LE+ G+L +++
Sbjct: 49 KSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH 108
Query: 64 VKLSEETCKCIVYQIAMALQYLH 86
+ E+ + ++A AL Y H
Sbjct: 109 GRFDEQRSATFMEELADALHYCH 131
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 117 LANALSYCHS 126
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10 KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
KEN+ Y E D + L HP V LY + + +Y L Y + G+L I E
Sbjct: 75 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 134
Query: 69 ETCKCIVYQIAMALQYLHS 87
+ +I AL+YLH
Sbjct: 135 TCTRFYTAEIVSALEYLHG 153
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + +
Sbjct: 60 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 119
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 120 LANALSYCHS 129
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + +
Sbjct: 62 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 121
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 122 LANALSYCHS 131
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + +
Sbjct: 57 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 116
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 117 LANALSYCHS 126
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + +
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 118 LANALSYCHS 127
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + +
Sbjct: 58 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 117
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 118 LANALSYCHS 127
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 42.0 bits (97), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
EV+ LK L HPNI+ L+E + + Y+ E GG+L +I + SE I+ Q+
Sbjct: 71 EVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQV 130
Query: 79 AMALQYLH 86
+ Y+H
Sbjct: 131 FSGITYMH 138
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + ++
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 143
Query: 79 AMALQYLHS 87
A AL Y HS
Sbjct: 144 ANALSYCHS 152
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10 KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
KEN+ Y E D + L HP V LY + + +Y L Y + G+L I E
Sbjct: 70 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 129
Query: 69 ETCKCIVYQIAMALQYLHS 87
+ +I AL+YLH
Sbjct: 130 TCTRFYTAEIVSALEYLHG 148
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + +
Sbjct: 59 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE 118
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 119 LANALSYCHS 128
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10 KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
KEN+ Y E D + L HP V LY + + +Y L Y + G+L I E
Sbjct: 72 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 131
Query: 69 ETCKCIVYQIAMALQYLHS 87
+ +I AL+YLH
Sbjct: 132 TCTRFYTAEIVSALEYLHG 150
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10 KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
KEN+ Y E D + L HP V LY + + +Y L Y + G+L I E
Sbjct: 73 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 132
Query: 69 ETCKCIVYQIAMALQYLHS 87
+ +I AL+YLH
Sbjct: 133 TCTRFYTAEIVSALEYLHG 151
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + ++
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 143
Query: 79 AMALQYLHS 87
A AL Y HS
Sbjct: 144 ANALSYCHS 152
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10 KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
KEN+ Y E D + L HP V LY + + +Y L Y + G+L I E
Sbjct: 72 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 131
Query: 69 ETCKCIVYQIAMALQYLHS 87
+ +I AL+YLH
Sbjct: 132 TCTRFYTAEIVSALEYLHG 150
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10 KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
KEN+ Y E D + L HP V LY + + +Y L Y + G+L I E
Sbjct: 70 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 129
Query: 69 ETCKCIVYQIAMALQYLHS 87
+ +I AL+YLH
Sbjct: 130 TCTRFYTAEIVSALEYLHG 148
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10 KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
KEN+ Y E D + L HP V LY + + +Y L Y + G+L I E
Sbjct: 72 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 131
Query: 69 ETCKCIVYQIAMALQYLHS 87
+ +I AL+YLH
Sbjct: 132 TCTRFYTAEIVSALEYLHG 150
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10 KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
KEN+ Y E D + L HP V LY + + +Y L Y + G+L I E
Sbjct: 73 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 132
Query: 69 ETCKCIVYQIAMALQYLHS 87
+ +I AL+YLH
Sbjct: 133 TCTRFYTAEIVSALEYLHG 151
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10 KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
KEN+ Y E D + L HP V LY + + +Y L Y + G+L I E
Sbjct: 70 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 129
Query: 69 ETCKCIVYQIAMALQYLHS 87
+ +I AL+YLH
Sbjct: 130 TCTRFYTAEIVSALEYLHG 148
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
EV+ L HPNI+ LY +Y+ LEY G + +++ K E+ + ++
Sbjct: 75 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 134
Query: 79 AMALQYLHS 87
A AL Y HS
Sbjct: 135 ANALSYCHS 143
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10 KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
KEN+ Y E D + L HP V LY + + +Y L Y + G+L I E
Sbjct: 70 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 129
Query: 69 ETCKCIVYQIAMALQYLHS 87
+ +I AL+YLH
Sbjct: 130 TCTRFYTAEIVSALEYLHG 148
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 10 KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
KEN+ Y E D + L HP V LY + + +Y L Y + G+L I E
Sbjct: 49 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 108
Query: 69 ETCKCIVYQIAMALQYLH 86
+ +I AL+YLH
Sbjct: 109 TCTRFYTAEIVSALEYLH 126
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 10 KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
KEN+ Y E D + L HP V LY + + +Y L Y + G+L I E
Sbjct: 50 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 109
Query: 69 ETCKCIVYQIAMALQYLH 86
+ +I AL+YLH
Sbjct: 110 TCTRFYTAEIVSALEYLH 127
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 10 KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
KEN+ Y E D + L HP V LY + + +Y L Y + G+L I E
Sbjct: 48 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 107
Query: 69 ETCKCIVYQIAMALQYLH 86
+ +I AL+YLH
Sbjct: 108 TCTRFYTAEIVSALEYLH 125
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Query: 10 KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
KEN+ Y E D + L HP V LY + + +Y L Y + G+L I E
Sbjct: 47 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 106
Query: 69 ETCKCIVYQIAMALQYLH 86
+ +I AL+YLH
Sbjct: 107 TCTRFYTAEIVSALEYLH 124
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10 KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
KEN+ Y E D + L HP V LY + + +Y L Y + G+L I E
Sbjct: 72 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 131
Query: 69 ETCKCIVYQIAMALQYLHS 87
+ +I AL+YLH
Sbjct: 132 TCTRFYTAEIVSALEYLHG 150
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10 KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
KEN+ Y E D + L HP V LY + + +Y L Y + G+L I E
Sbjct: 69 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 128
Query: 69 ETCKCIVYQIAMALQYLHS 87
+ +I AL+YLH
Sbjct: 129 TCTRFYTAEIVSALEYLHG 147
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10 KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
KEN+ Y E D + L HP V LY + + +Y L Y + G+L I E
Sbjct: 69 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 128
Query: 69 ETCKCIVYQIAMALQYLHS 87
+ +I AL+YLH
Sbjct: 129 TCTRFYTAEIVSALEYLHG 147
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Query: 10 KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
KEN+ Y E D + L HP V LY + + +Y L Y + G+L I E
Sbjct: 54 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 113
Query: 69 ETCKCIVYQIAMALQYLHS 87
+ +I AL+YLH
Sbjct: 114 TCTRFYTAEIVSALEYLHG 132
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%)
Query: 26 LSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYL 85
L+H N+V Y + Y+FLEY GG+L +IE + + E + +Q+ + YL
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 86 HSL 88
H +
Sbjct: 122 HGI 124
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 19/117 (16%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
+++ Q ++D+ E+ + HPNIV+ Y S + KD +++ ++ + GG + I
Sbjct: 45 LEKCQTSMDE-----LLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDII 99
Query: 61 EACVK--------LSEETCKCIVYQIAMALQYLHSLMSVNQHKPRYIAWKVGSILAG 109
+ V L E T I+ ++ L+YLH +++ K G+IL G
Sbjct: 100 KHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRD------VKAGNILLG 150
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 19/117 (16%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
+++ Q ++D+ E+ + HPNIV+ Y S + KD +++ ++ + GG + I
Sbjct: 50 LEKCQTSMDE-----LLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDII 104
Query: 61 EACVK--------LSEETCKCIVYQIAMALQYLHSLMSVNQHKPRYIAWKVGSILAG 109
+ V L E T I+ ++ L+YLH +++ K G+IL G
Sbjct: 105 KHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRD------VKAGNILLG 155
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ + E+ + +
Sbjct: 61 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITE 120
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 121 LANALSYCHS 130
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
EV+ L HPNI+ LY +Y+ LEY G + +++ + E+ + +
Sbjct: 61 REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITE 120
Query: 78 IAMALQYLHS 87
+A AL Y HS
Sbjct: 121 LANALSYCHS 130
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACVKLSEETCKCIVYQ 77
E+ L H NI+ L+ES + + M E++ G D+ +I + +L+E V+Q
Sbjct: 51 EISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQ 110
Query: 78 IAMALQYLHS 87
+ ALQ+LHS
Sbjct: 111 VCEALQFLHS 120
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 10 KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
KEN+ Y E D + L HP V LY + +Y L Y + G+L I E
Sbjct: 77 KENKVPYVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDE 136
Query: 69 ETCKCIVYQIAMALQYLHS 87
+ +I AL+YLH
Sbjct: 137 TCTRFYTAEIVSALEYLHG 155
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
+ RK F E+ L ++HPNIV LY + L + + + +EY +GG L + + L
Sbjct: 43 ESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYY 100
Query: 70 TCK-----CIVYQIAMALQYLHSL 88
T C+ Q + + YLHS+
Sbjct: 101 TAAHAMSWCL--QCSQGVAYLHSM 122
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 9/84 (10%)
Query: 10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
+ RK F E+ L ++HPNIV LY + L + + + +EY +GG L + + L
Sbjct: 42 ESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYY 99
Query: 70 TCK-----CIVYQIAMALQYLHSL 88
T C+ Q + + YLHS+
Sbjct: 100 TAAHAMSWCL--QCSQGVAYLHSM 121
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE+ LK + H NIVTL + + Y+ ++ V GG+L +I +E+ ++ Q
Sbjct: 55 NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQ 114
Query: 78 IAMALQYLH 86
+ A++YLH
Sbjct: 115 VLSAVKYLH 123
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 28 HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
HPNI+TL + ++Y+ E ++GG+L KI SE +++ I ++YLHS
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 88 LMSVNQH-KPRYIAW 101
V++ KP I +
Sbjct: 140 QGVVHRDLKPSNILY 154
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 28 HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
HPNI+TL + ++Y+ E ++GG+L KI SE +++ I ++YLHS
Sbjct: 80 HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHS 139
Query: 88 LMSVNQH-KPRYIAW 101
V++ KP I +
Sbjct: 140 QGVVHRDLKPSNILY 154
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 36/60 (60%)
Query: 29 PNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL 88
P +VTL+ + + +++ L+Y+ GG+L + + + +E + V +I +AL++LH L
Sbjct: 119 PFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL 178
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 6 NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACV 64
N + ++ NE+ ++ +PNIV +S L D +++ +EY+ GG L + E C
Sbjct: 54 NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC- 112
Query: 65 KLSEETCKCIVYQIAMALQYLHS 87
+ E + + AL++LHS
Sbjct: 113 -MDEGQIAAVCRECLQALEFLHS 134
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 6 NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACV 64
N + ++ NE+ ++ +PNIV +S L D +++ +EY+ GG L + E C
Sbjct: 55 NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC- 113
Query: 65 KLSEETCKCIVYQIAMALQYLHS 87
+ E + + AL++LHS
Sbjct: 114 -MDEGQIAAVCRECLQALEFLHS 135
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 6 NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACV 64
N + ++ NE+ ++ +PNIV +S L D +++ +EY+ GG L + E C
Sbjct: 54 NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC- 112
Query: 65 KLSEETCKCIVYQIAMALQYLHS 87
+ E + + AL++LHS
Sbjct: 113 -MDEGQIAAVCRECLQALEFLHS 134
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Query: 10 KENR-KYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
KEN+ Y E D + L HP V LY + + +Y L Y + G L I E
Sbjct: 72 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDE 131
Query: 69 ETCKCIVYQIAMALQYLHS 87
+ +I AL+YLH
Sbjct: 132 TCTRFYTAEIVSALEYLHG 150
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 6 NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACV 64
N + ++ NE+ ++ +PNIV +S L D +++ +EY+ GG L + E C
Sbjct: 55 NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC- 113
Query: 65 KLSEETCKCIVYQIAMALQYLHS 87
+ E + + AL++LHS
Sbjct: 114 -MDEGQIAAVCRECLQALEFLHS 135
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 6 NALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACV 64
N + ++ NE+ ++ +PNIV +S L D +++ +EY+ GG L + E C
Sbjct: 54 NLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC- 112
Query: 65 KLSEETCKCIVYQIAMALQYLHS 87
+ E + + AL++LHS
Sbjct: 113 -MDEGQIAAVCRECLQALEFLHS 134
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS---KIEACVKLSEETCK 72
F EV +K L HPNIV +V N+ + EY+ G L K A +L E
Sbjct: 81 FLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL 140
Query: 73 CIVYQIAMALQYLHS 87
+ Y +A + YLH+
Sbjct: 141 SMAYDVAKGMNYLHN 155
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS---KIEACVKLSEETCK 72
F EV +K L HPNIV +V N+ + EY+ G L K A +L E
Sbjct: 81 FLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL 140
Query: 73 CIVYQIAMALQYLHS 87
+ Y +A + YLH+
Sbjct: 141 SMAYDVAKGMNYLHN 155
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 24 KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
+ L HPNIV L++S+ + Y+ + V GG+L I A SE + QI ++
Sbjct: 83 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 142
Query: 84 YLHS 87
Y HS
Sbjct: 143 YCHS 146
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
NE+ L+ + H NIV L + +++Y+ ++ V GG+L +I +E+ ++ Q
Sbjct: 69 NEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQ 128
Query: 78 IAMALQYLHSLMSVNQH-KP 96
+ A+ YLH + V++ KP
Sbjct: 129 VLDAVYYLHRMGIVHRDLKP 148
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 38.9 bits (89), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
L + + E + L HPNIV L++S+ + + Y+ + V GG+L I A S
Sbjct: 49 LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS 108
Query: 68 EETCKCIVYQIAMALQYLHSLMSVNQH-KP 96
E + QI A+ + H + V+++ KP
Sbjct: 109 EADASHCIQQILEAVLHCHQMGVVHRNLKP 138
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 38.9 bits (89), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%)
Query: 8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
L + + E + L HPNIV L++S+ + + Y+ + V GG+L I A S
Sbjct: 60 LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYS 119
Query: 68 EETCKCIVYQIAMALQYLHSLMSVNQ 93
E + QI A+ + H + V++
Sbjct: 120 EADASHCIQQILEAVLHCHQMGVVHR 145
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 24 KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
+ L HPNIV L++S+ + Y+ + V GG+L I A SE + QI ++
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 119
Query: 84 YLHS 87
Y HS
Sbjct: 120 YCHS 123
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 24 KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
+ L HPNIV L++S+ + Y+ + V GG+L I A SE + QI ++
Sbjct: 59 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 118
Query: 84 YLHS 87
Y HS
Sbjct: 119 YCHS 122
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 24 KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQ 83
+ L HPNIV L++S+ + Y+ + V GG+L I A SE + QI ++
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 119
Query: 84 YLHS 87
Y HS
Sbjct: 120 YCHS 123
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 23 LKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMAL 82
L+ HPNI+TL + +Y+ E ++GG+L KI SE +++ I +
Sbjct: 70 LRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTV 129
Query: 83 QYLHS 87
+YLH+
Sbjct: 130 EYLHA 134
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 27 SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH 86
+HP + L+ D ++ +E+V GGDL I+ + E + +I AL +LH
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLH 141
Query: 87 S 87
Sbjct: 142 D 142
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E+V DLK+ ++A + K +
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEHVH-QDLKTFMDASALTGIPLPLIKSYL 108
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 109 FQLLQGLAFCHS 120
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 23 LKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMAL 82
L+ HPNI+TL + +Y+ E +GG+L KI SE +++ I +
Sbjct: 70 LRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTV 129
Query: 83 QYLHSLMSVNQH-KPRYIAW 101
+YLH+ V++ KP I +
Sbjct: 130 EYLHAQGVVHRDLKPSNILY 149
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK+ ++A + K +
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKTFMDASALTGIPLPLIKSYL 112
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 113 FQLLQGLAFCHS 124
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%)
Query: 8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
L + + E + L HPNIV L++S+ + Y+ + V GG+L I A S
Sbjct: 69 LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS 128
Query: 68 EETCKCIVYQIAMALQYLH 86
E ++QI ++ ++H
Sbjct: 129 EADASHCIHQILESVNHIH 147
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E+V DLK ++A + K +
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEHVD-QDLKKFMDASALTGIPLPLIKSYL 112
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 113 FQLLQGLAFCHS 124
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 58 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 116
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 117 FQLLQGLAFCHS 128
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 109
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 110 FQLLQGLAFCHS 121
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 109
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 110 FQLLQGLSFCHS 121
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 55 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 113
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 114 FQLLQGLAFCHS 125
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 112
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 113 FQLLQGLAFCHS 124
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK-LSEETCKCIVY 76
NEV L HP+I+ LY + +Y+ LE G++ ++ VK SE + ++
Sbjct: 60 NEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMH 119
Query: 77 QIAMALQYLHS 87
QI + YLHS
Sbjct: 120 QIITGMLYLHS 130
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKDFMDASALTGIPLPLIKSYL 109
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 110 FQLLQGLAFCHS 121
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 58 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 116
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 117 FQLLQGLAFCHS 128
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 112
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 113 FQLLQGLAFCHS 124
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 111
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 112 FQLLQGLAFCHS 123
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 109
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 110 FQLLQGLAFCHS 121
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEY-----VQGGDLKSKIEACVKLSEETCK 72
E+ LK L H N++ L + +I F E + G DL + I C LS+E +
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNN-IVKCQALSDEHVQ 134
Query: 73 CIVYQIAMALQYLHSLMSVNQH-KPRYIA 100
+VYQ+ L+Y+HS +++ KP +A
Sbjct: 135 FLVYQLLRGLKYIHSAGIIHRDLKPSNVA 163
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 110
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 111 FQLLQGLAFCHS 122
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 110
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 111 FQLLQGLAFCHS 122
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 55 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 113
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 114 FQLLQGLAFCHS 125
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 111
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 112 FQLLQGLAFCHS 123
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 111
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 112 FQLLQGLAFCHS 123
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 110
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 111 FQLLQGLAFCHS 122
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 110
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 111 FQLLQGLAFCHS 122
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 109
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 110 FQLLQGLAFCHS 121
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 108
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 109 FQLLQGLAFCHS 120
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 109
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 110 FQLLQGLAFCHS 121
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 108
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 109 FQLLQGLAFCHS 120
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCAKLTDDHVQ 124
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 125 FLIYQILRGLKYIHS 139
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 109
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 110 FQLLQGLAFCHS 121
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 109
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 110 FQLLQGLAFCHS 121
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 108
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 109 FQLLQGLAFCHS 120
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 109
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 110 FQLLQGLAFCHS 121
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 108
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 109 FQLLQGLAFCHS 120
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 50 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 108
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 109 FQLLQGLAFCHS 120
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 51 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QDLKKFMDASALTGIPLPLIKSYL 109
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 110 FQLLQGLAFCHS 121
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 28 HPNIVTLYESVLWKDNIYMFL--EYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYL 85
HPNIV L+E ++ D ++ FL E + GG+L +I+ SE I+ ++ A+ ++
Sbjct: 65 HPNIVKLHE--VFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHM 122
Query: 86 HSLMSVNQ 93
H + V++
Sbjct: 123 HDVGVVHR 130
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEY-----VQGGDLKSKIEACVKLSEETCK 72
E+ LK L H N++ L + +I F E + G DL + I C LS+E +
Sbjct: 68 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNN-IVKCQALSDEHVQ 126
Query: 73 CIVYQIAMALQYLHSLMSVNQH-KPRYIA 100
+VYQ+ L+Y+HS +++ KP +A
Sbjct: 127 FLVYQLLRGLKYIHSAGIIHRDLKPSNVA 155
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-CVKLSEETCKCIVY 76
NE+ + L HP ++ L+++ K + + LE++ GG+L +I A K+SE +
Sbjct: 97 NEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMR 156
Query: 77 QIAMALQYLH 86
Q L+++H
Sbjct: 157 QACEGLKHMH 166
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 14/100 (14%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
+K +++A D RK F E + L +L H +IV Y + D + M EY++ GDL +
Sbjct: 48 VKTLKDASDNA-RKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFL 106
Query: 61 EA-------------CVKLSEETCKCIVYQIAMALQYLHS 87
A +L++ I QIA + YL S
Sbjct: 107 RAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS 146
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLS-MDLKDFMDASALTGIPLPLIKSYL 112
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 113 FQLLQGLAFCHS 124
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 53 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLS-MDLKDFMDASALTGIPLPLIKSYL 111
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 112 FQLLQGLAFCHS 123
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK-LSEETCKCIVYQ 77
EV LK L H NIVTL++ + + ++ + EY+ DLK ++ C ++ K ++Q
Sbjct: 50 EVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KDLKQYLDDCGNIINMHNVKLFLFQ 108
Query: 78 IAMALQYLH 86
+ L Y H
Sbjct: 109 LLRGLAYCH 117
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 15 YFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCI 74
+ A E+ L+ P IV LY +V + +F+E ++GG L ++ L E+
Sbjct: 112 FRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYY 171
Query: 75 VYQIAMALQYLHS 87
+ Q L+YLHS
Sbjct: 172 LGQALEGLEYLHS 184
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 54 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLS-MDLKKFMDASALTGIPLPLIKSYL 112
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 113 FQLLQGLAFCHS 124
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 15 YFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCI 74
+ A E+ L+ P IV LY +V + +F+E ++GG L ++ L E+
Sbjct: 131 FRAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYY 190
Query: 75 VYQIAMALQYLHS 87
+ Q L+YLHS
Sbjct: 191 LGQALEGLEYLHS 203
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC--VKLSEETCKCIV 75
E+ LK L+HPNIV L + + ++ +Y+ E++ DLK ++A + K +
Sbjct: 52 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFLS-MDLKKFMDASALTGIPLPLIKSYL 110
Query: 76 YQIAMALQYLHS 87
+Q+ L + HS
Sbjct: 111 FQLLQGLAFCHS 122
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 26 LSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI----EACVKLSEETCKCIVYQIAMA 81
L HP+IV L E+ +YM E++ G DL +I +A SE + QI A
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 82 LQYLHS 87
L+Y H
Sbjct: 143 LRYCHD 148
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 26 LSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI----EACVKLSEETCKCIVYQIAMA 81
L HP+IV L E+ +YM E++ G DL +I +A SE + QI A
Sbjct: 85 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 144
Query: 82 LQYLH 86
L+Y H
Sbjct: 145 LRYCH 149
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Query: 19 EVDNLKSLSHPNIVTLYE-----SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKC 73
E+ LK + H N++ L + + L + N + ++ G DL + I C KL+++ +
Sbjct: 100 ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNN-IVKCQKLTDDHVQF 158
Query: 74 IVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 159 LIYQILRGLKYIHS 172
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 26 LSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI----EACVKLSEETCKCIVYQIAMA 81
L HP+IV L E+ +YM E++ G DL +I +A SE + QI A
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEA 142
Query: 82 LQYLHS 87
L+Y H
Sbjct: 143 LRYCHD 148
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 35.8 bits (81), Expect = 0.007, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACVKLS 67
DKE + E+ + L HP +V L+++ + + M E++ GG+L K+ + K+S
Sbjct: 197 DKETVR---KEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMS 253
Query: 68 EETCKCIVYQIAMALQYLH 86
E+ + Q+ L ++H
Sbjct: 254 EDEAVEYMRQVCKGLCHMH 272
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 139
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 140 FLIYQILRGLKYIHS 154
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 148
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 149 FLIYQILRGLKYIHS 163
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 130
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 131 FLIYQILRGLKYIHS 145
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 133
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 134 FLIYQILRGLKYIHS 148
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 133
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 134 FLIYQILRGLKYIHS 148
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 148
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 149 FLIYQILRGLKYIHS 163
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 124
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 125 FLIYQILRGLKYIHS 139
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 147
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 148 FLIYQILRGLKYIHS 162
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 134
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 135 FLIYQILRGLKYIHS 149
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 128
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 129 FLIYQILRGLKYIHS 143
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 69 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 126
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 127 FLIYQILRGLKYIHS 141
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 125
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 126 FLIYQILRGLKYIHS 140
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 82 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 139
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 140 FLIYQILRGLKYIHS 154
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 128
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 129 FLIYQILRGLKYIHS 143
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 81 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 138
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 139 FLIYQILRGLKYIHS 153
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 91 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 148
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 149 FLIYQILRGLKYIHS 163
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 26 LSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYL 85
L HPNI+ L L + N+ + +E+ +GG L +++ + ++ + QIA + YL
Sbjct: 63 LKHPNIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDILVNWAVQIARGMNYL 121
Query: 86 HS 87
H
Sbjct: 122 HD 123
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 128
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 129 FLIYQILRGLKYIHS 143
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 140
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 141 FLIYQILRGLKYIHS 155
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 151
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 152 FLIYQILRGLKYIHS 166
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 140
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 141 FLIYQILRGLKYIHS 155
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 128
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 129 FLIYQILRGLKYIHS 143
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 134
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 135 FLIYQILRGLKYIHS 149
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 124
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 125 FLIYQILRGLKYIHS 139
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 90 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 147
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 148 FLIYQILRGLKYIHS 162
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 128
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 129 FLIYQILRGLKYIHS 143
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 134
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 135 FLIYQILRGLKYIHS 149
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 128
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 129 FLIYQILRGLKYIHS 143
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 135
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 136 FLIYQILRGLKYIHS 150
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 35.4 bits (80), Expect = 0.008, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 1 MKEVQNALDK-ENRKYFANEVDNLKSLSHPNIVTLYE----SVLWKD--NIYMFLEYVQG 53
+K++ NA D N K E+ LK H NI+ + + +V + + ++Y+ L+ ++
Sbjct: 85 IKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES 144
Query: 54 GDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVNQ 93
DL I + L+ E + +YQ+ L+Y+HS +++
Sbjct: 145 -DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHR 183
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 35.4 bits (80), Expect = 0.008, Method: Composition-based stats.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 1 MKEVQNALDK-ENRKYFANEVDNLKSLSHPNIVTLYE----SVLWKD--NIYMFLEYVQG 53
+K++ NA D N K E+ LK H NI+ + + +V + + ++Y+ L+ ++
Sbjct: 84 IKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMES 143
Query: 54 GDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSVNQ 93
DL I + L+ E + +YQ+ L+Y+HS +++
Sbjct: 144 -DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHR 182
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%)
Query: 15 YFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCI 74
+ E+ LS P IV LY +V + +F+E ++GG L I+ L E+
Sbjct: 110 FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYY 169
Query: 75 VYQIAMALQYLHS 87
+ Q L+YLH+
Sbjct: 170 LGQALEGLEYLHT 182
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 128
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 129 FLIYQILRGLKYIHS 143
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 133
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 134 FLIYQILRGLKYIHS 148
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 77 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 134
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 135 FLIYQILRGLKYIHS 149
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 70 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 127
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 128 FLIYQILRGLKYIHS 142
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 94 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 151
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 152 FLIYQILRGLKYIHS 166
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 128
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 129 FLIYQILRGLKYIHS 143
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 68 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 125
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 126 FLIYQILRGLKYIHS 140
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 135
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 136 FLIYQILRGLKYIHS 150
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 128
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 129 FLIYQILRGLKYIHS 143
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 76 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 133
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 134 FLIYQILRGLKYIHS 148
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 128
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 129 FLIYQILRGLKYIHS 143
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 83 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 140
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 141 FLIYQILRGLKYIHS 155
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 67 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 124
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 125 FLIYQILRGLKYIHS 139
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 130
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 131 FLIYQILRGLKYIHS 145
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 128
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 129 FLIYQILRGLKYIHS 143
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 128
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 129 FLIYQILRGLKYIHS 143
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 128
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 129 FLIYQILRGLKYIHS 143
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 128
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 129 FLIYQILRGLKYIHS 143
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 128
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 129 FLIYQILRGLKYIHS 143
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 128
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 129 FLIYQILRGLKYIHS 143
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 130
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 131 FLIYQILRGLKYIHS 145
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 128
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 129 FLIYQILRGLKYIHS 143
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 128
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 129 FLIYQILRGLKYIHS 143
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 73 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 130
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 131 FLIYQILRGLKYIHS 145
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 35.4 bits (80), Expect = 0.009, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACVKLS 67
DKE + E+ + L HP +V L+++ + + M E++ GG+L K+ + K+S
Sbjct: 91 DKETVR---KEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMS 147
Query: 68 EETCKCIVYQIAMALQYLH 86
E+ + Q+ L ++H
Sbjct: 148 EDEAVEYMRQVCKGLCHMH 166
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 23 LKSLSHPNIVTLYESVLWK-DNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMA 81
L L P +T S D +Y +EYV GGDL I+ K E +I++
Sbjct: 73 LALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIG 132
Query: 82 LQYLH 86
L +LH
Sbjct: 133 LFFLH 137
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 19 EVDNLKSLSHPNIVTLYESV--LWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVY 76
E+ LK L HPN+V L E + +D++YM E V G + ++ LSE+ +
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV-MEVPTLKPLSEDQARFYFQ 144
Query: 77 QIAMALQYLH 86
+ ++YLH
Sbjct: 145 DLIKGIEYLH 154
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 135
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 136 FLIYQILRGLKYIHS 150
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%)
Query: 15 YFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCI 74
+ E+ LS P IV LY +V + +F+E ++GG L I+ L E+
Sbjct: 96 FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYY 155
Query: 75 VYQIAMALQYLHS 87
+ Q L+YLH+
Sbjct: 156 LGQALEGLEYLHT 168
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + I C KL+++ +
Sbjct: 78 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNN-IVKCQKLTDDHVQ 135
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 136 FLIYQILRGLKYIHS 150
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%)
Query: 15 YFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCI 74
+ E+ LS P IV LY +V + +F+E ++GG L I+ L E+
Sbjct: 112 FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYY 171
Query: 75 VYQIAMALQYLHS 87
+ Q L+YLH+
Sbjct: 172 LGQALEGLEYLHT 184
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
KEV A D+ N V L++ HP + L S D + +EY GG+L +
Sbjct: 45 KEVIVAKDEVAHTLTENRV--LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS 102
Query: 62 ACVKLSEETCKCIVYQIAMALQYLHS 87
SE+ + +I AL YLHS
Sbjct: 103 RERVFSEDRARFYGAEIVSALDYLHS 128
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQ 77
E+ LK L H NIV LY+ + K + + E++ DLK ++ C L T K + Q
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 78 IAMALQYLHS 87
+ + Y H
Sbjct: 109 LLNGIAYCHD 118
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQ 77
E+ LK L H NIV LY+ + K + + E++ DLK ++ C L T K + Q
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 78 IAMALQYLHS 87
+ + Y H
Sbjct: 109 LLNGIAYCHD 118
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV-KLSEETCKCIVYQ 77
E+ LK L H NIV LY+ + K + + E++ DLK ++ C L T K + Q
Sbjct: 50 EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKKLLDVCEGGLESVTAKSFLLQ 108
Query: 78 IAMALQYLHS 87
+ + Y H
Sbjct: 109 LLNGIAYCHD 118
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
KEV A D+ N V L++ HP + L S D + +EY GG+L +
Sbjct: 43 KEVIVAKDEVAHTLTENRV--LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS 100
Query: 62 ACVKLSEETCKCIVYQIAMALQYLHS 87
SE+ + +I AL YLHS
Sbjct: 101 RERVFSEDRARFYGAEIVSALDYLHS 126
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 10 KENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
+E R+ E L+ ++ HP+I+TL +S +++ + ++ G+L + V LSE
Sbjct: 140 EEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSE 199
Query: 69 ETCKCIVYQIAMALQYLHS 87
+ + I+ + A+ +LH+
Sbjct: 200 KETRSIMRSLLEAVSFLHA 218
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
KEV A D+ N V L++ HP + L S D + +EY GG+L +
Sbjct: 44 KEVIVAKDEVAHTLTENRV--LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS 101
Query: 62 ACVKLSEETCKCIVYQIAMALQYLHS 87
SE+ + +I AL YLHS
Sbjct: 102 RERVFSEDRARFYGAEIVSALDYLHS 127
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
+ + +F E D + + P +V L+ + +YM +EY+ GGDL + + + + E+
Sbjct: 116 RSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEK 174
Query: 70 TCKCIVYQIAMALQYLHSL 88
K ++ +AL +HS+
Sbjct: 175 WAKFYTAEVVLALDAIHSM 193
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%)
Query: 10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
K+ + E L++ HP + L + D + +EY GG+L + +EE
Sbjct: 49 KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE 108
Query: 70 TCKCIVYQIAMALQYLHS 87
+ +I AL+YLHS
Sbjct: 109 RARFYGAEIVSALEYLHS 126
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 16/93 (17%)
Query: 9 DKENRKYFANEVDNLKSLSHPNIVTLYE--------------SVLWKDNIYMFLEYVQGG 54
D ++ K+ E+ ++ L H NIV ++E S+ +++Y+ EY++
Sbjct: 48 DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET- 106
Query: 55 DLKSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
DL + +E L EE + +YQ+ L+Y+HS
Sbjct: 107 DLANVLEQG-PLLEEHARLFMYQLLRGLKYIHS 138
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%)
Query: 10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
K+ + E L++ HP + L + D + +EY GG+L + +EE
Sbjct: 46 KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE 105
Query: 70 TCKCIVYQIAMALQYLHS 87
+ +I AL+YLHS
Sbjct: 106 RARFYGAEIVSALEYLHS 123
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%)
Query: 23 LKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMAL 82
L++ HP + L + D + +EY GG+L + +EE + +I AL
Sbjct: 64 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 123
Query: 83 QYLHS 87
+YLHS
Sbjct: 124 EYLHS 128
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 35/78 (44%)
Query: 10 KENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEE 69
K+ + E L++ HP + L + D + +EY GG+L + +EE
Sbjct: 46 KDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEE 105
Query: 70 TCKCIVYQIAMALQYLHS 87
+ +I AL+YLHS
Sbjct: 106 RARFYGAEIVSALEYLHS 123
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%)
Query: 23 LKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMAL 82
L++ HP + L + D + +EY GG+L + +EE + +I AL
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 118
Query: 83 QYLHS 87
+YLHS
Sbjct: 119 EYLHS 123
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
L + + E + L HPNIV L++S+ + Y+ + V GG+L I A S
Sbjct: 42 LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS 101
Query: 68 EETCKCIVYQIAMALQYLH 86
E + QI ++ + H
Sbjct: 102 EADASHCIQQILESVNHCH 120
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%)
Query: 23 LKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMAL 82
L++ HP + L + D + +EY GG+L + +EE + +I AL
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 118
Query: 83 QYLHS 87
+YLHS
Sbjct: 119 EYLHS 123
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 31/65 (47%)
Query: 23 LKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMAL 82
L++ HP + L + D + +EY GG+L + +EE + +I AL
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 118
Query: 83 QYLHS 87
+YLHS
Sbjct: 119 EYLHS 123
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 34.7 bits (78), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 36/79 (45%)
Query: 8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
L + + E + L HPNIV L++S+ + Y+ + V GG+L I A S
Sbjct: 42 LSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS 101
Query: 68 EETCKCIVYQIAMALQYLH 86
E + QI ++ + H
Sbjct: 102 EADASHCIQQILESVNHCH 120
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 34.7 bits (78), Expect = 0.016, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
KEV A D+ N V L++ HP + L S D + +EY GG+L +
Sbjct: 183 KEVIVAKDEVAHTLTENRV--LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS 240
Query: 62 ACVKLSEETCKCIVYQIAMALQYLHSLMSV 91
SE+ + +I AL YLHS +V
Sbjct: 241 RERVFSEDRARFYGAEIVSALDYLHSEKNV 270
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 34.7 bits (78), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 29 PNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
P + L+ D +Y +EYV GGDL I+ + E +IA+ L +L S
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQS 139
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 34.7 bits (78), Expect = 0.017, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 2 KEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIE 61
KEV A D+ N V L++ HP + L S D + +EY GG+L +
Sbjct: 186 KEVIVAKDEVAHTLTENRV--LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLS 243
Query: 62 ACVKLSEETCKCIVYQIAMALQYLHSLMSV 91
SE+ + +I AL YLHS +V
Sbjct: 244 RERVFSEDRARFYGAEIVSALDYLHSEKNV 273
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 7 ALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACVK 65
A D NR E+ L+ LSHPNI+ L ++ K NI + ++++ DL+ I + +
Sbjct: 51 AKDGINRTAL-REIKLLQELSHPNIIGLLDAFGHKSNISLVFDFME-TDLEVIIKDNSLV 108
Query: 66 LSEETCKCIVYQIAMALQYLH 86
L+ K + L+YLH
Sbjct: 109 LTPSHIKAYMLMTLQGLEYLH 129
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 33.9 bits (76), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 31/74 (41%)
Query: 13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
+K E+ LK L HPN+V L E K +++ EY L + E K
Sbjct: 46 KKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVK 105
Query: 73 CIVYQIAMALQYLH 86
I +Q A+ + H
Sbjct: 106 SITWQTLQAVNFCH 119
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 33.9 bits (76), Expect = 0.026, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 29 PNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHS 87
P + L+ D +Y +EYV GGDL I+ + E +IA+ L +L S
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQS 460
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 33.9 bits (76), Expect = 0.026, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
+ + + +F E D + + P +V L+ + +YM +EY+ GGDL + + + +
Sbjct: 113 IKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVP 171
Query: 68 EETCKCIVYQIAMALQYLHSL 88
E+ + ++ +AL +HS+
Sbjct: 172 EKWARFYTAEVVLALDAIHSM 192
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 33.9 bits (76), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
F E +K + HPN+V L + Y+ EY+ G+L + C + E T ++
Sbjct: 75 FLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNR-EEVTAVVLL 133
Query: 76 Y---QIAMALQYL 85
Y QI+ A++YL
Sbjct: 134 YMATQISSAMEYL 146
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 33.9 bits (76), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKC 73
EV +K L HPNI LYE + I + +E GG L K+ V + + T KC
Sbjct: 78 EVRLMKKLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLN--VFIDDSTGKC 130
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 33.9 bits (76), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 10 KENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFL--EYVQGGDLKSKIEACVKL 66
+E R+ EVD L+ +S HPNI+ L ++ ++ N + FL + ++ G+L + V L
Sbjct: 51 QELREATLKEVDILRKVSGHPNIIQLKDT--YETNTFFFLVFDLMKKGELFDYLTEKVTL 108
Query: 67 SEETCKCIVYQIAMALQYLHSLMSVNQH-KPRYI 99
SE+ + I+ + + LH L V++ KP I
Sbjct: 109 SEKETRKIMRALLEVICALHKLNIVHRDLKPENI 142
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 33.9 bits (76), Expect = 0.027, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
+ + + +F E D + + P +V L+ + +YM +EY+ GGDL + + + +
Sbjct: 113 IKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVP 171
Query: 68 EETCKCIVYQIAMALQYLHSL 88
E+ + ++ +AL +HS+
Sbjct: 172 EKWARFYTAEVVLALDAIHSM 192
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 33.9 bits (76), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 10 KENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFL--EYVQGGDLKSKIEACVKL 66
+E R+ EVD L+ +S HPNI+ L ++ ++ N + FL + ++ G+L + V L
Sbjct: 64 QELREATLKEVDILRKVSGHPNIIQLKDT--YETNTFFFLVFDLMKKGELFDYLTEKVTL 121
Query: 67 SEETCKCIVYQIAMALQYLHSLMSVNQH-KPRYI 99
SE+ + I+ + + LH L V++ KP I
Sbjct: 122 SEKETRKIMRALLEVICALHKLNIVHRDLKPENI 155
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 33.9 bits (76), Expect = 0.027, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
+ + + +F E D + + P +V L+ + +YM +EY+ GGDL + + + +
Sbjct: 108 IKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYDVP 166
Query: 68 EETCKCIVYQIAMALQYLHSL 88
E+ + ++ +AL +HS+
Sbjct: 167 EKWARFYTAEVVLALDAIHSM 187
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 33.9 bits (76), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 10 KENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFL--EYVQGGDLKSKIEACVKL 66
+E R+ EVD L+ +S HPNI+ L ++ ++ N + FL + ++ G+L + V L
Sbjct: 64 QELREATLKEVDILRKVSGHPNIIQLKDT--YETNTFFFLVFDLMKKGELFDYLTEKVTL 121
Query: 67 SEETCKCIVYQIAMALQYLHSLMSVNQH-KPRYI 99
SE+ + I+ + + LH L V++ KP I
Sbjct: 122 SEKETRKIMRALLEVICALHKLNIVHRDLKPENI 155
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 33.9 bits (76), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQI 78
EV LK L H NI+ L + +++ EY + DLK ++ +S K +YQ+
Sbjct: 83 EVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQL 141
Query: 79 AMALQYLHS 87
+ + HS
Sbjct: 142 INGVNFCHS 150
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 33.9 bits (76), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEY-----VQGGDLKSKIEACVKLSEETCK 72
E+ LK L H N++ L + +I F E + G DL + +++ LS+E +
Sbjct: 76 RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQA-LSDEHVQ 134
Query: 73 CIVYQIAMALQYLHSLMSVNQH-KPRYIA 100
+VYQ+ L+Y+HS +++ KP +A
Sbjct: 135 FLVYQLLRGLKYIHSAGIIHRDLKPSNVA 163
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 33.5 bits (75), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 14 KYFANEVDNLKSLSHPNIVTLYESVLWKD-----NIYMFLEYVQGGDLKSKIEACVKLSE 68
K E+ L L+H ++V + + V+ KD +Y+ LE + D K V L+E
Sbjct: 97 KRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLE-IADSDFKKLFRTPVYLTE 155
Query: 69 ETCKCIVYQIAMALQYLHS 87
K ++Y + + ++Y+HS
Sbjct: 156 LHIKTLLYNLLVGVKYVHS 174
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEET 70
E + F EV + +L+HPNIV LY L + M +E+V GDL ++ + +
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWS 122
Query: 71 CKC-IVYQIAMALQYLHSLMSVNQHKP 96
K ++ IA+ ++Y+ NQ+ P
Sbjct: 123 VKLRLMLDIALGIEYMQ-----NQNPP 144
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEET 70
E + F EV + +L+HPNIV LY L + M +E+V GDL ++ + +
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWS 122
Query: 71 CKC-IVYQIAMALQYLHSLMSVNQHKP 96
K ++ IA+ ++Y+ NQ+ P
Sbjct: 123 VKLRLMLDIALGIEYMQ-----NQNPP 144
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEET 70
E + F EV + +L+HPNIV LY L + M +E+V GDL ++ + +
Sbjct: 65 EKFQEFQREVFIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWS 122
Query: 71 CKC-IVYQIAMALQYLHSLMSVNQHKP 96
K ++ IA+ ++Y+ NQ+ P
Sbjct: 123 VKLRLMLDIALGIEYMQ-----NQNPP 144
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 33.1 bits (74), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 52/90 (57%), Gaps = 8/90 (8%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLW---KDNIYMFLEYVQGGDLK 57
+K++Q++ + E+ + F E++ LKSL H NIV Y+ V + + N+ + +EY+ G L+
Sbjct: 47 VKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 58 SKIEACVKLSEETCKCIVY--QIAMALQYL 85
++A + + K + Y QI ++YL
Sbjct: 105 DYLQAHAERIDHI-KLLQYTSQICKGMEYL 133
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 33.1 bits (74), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%)
Query: 8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
L + + E + L H NIV L++S+ + Y+ + V GG+L I A S
Sbjct: 42 LSARDHQKLEREARICRLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYS 101
Query: 68 EETCKCIVYQIAMALQYLHSLMSVNQ 93
E + QI A+ + H + V++
Sbjct: 102 EADASHCIQQILEAVLHCHQMGVVHR 127
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 33.1 bits (74), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS-KIEACVKLSEETCKCIVYQ 77
E++ L + HP IV L + +++ +E+ GG + + +E L+E + + Q
Sbjct: 58 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQ 117
Query: 78 IAMALQYLHS 87
+ AL +LHS
Sbjct: 118 MLEALNFLHS 127
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 33.1 bits (74), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS-KIEACVKLSEETCKCIVYQ 77
E++ L + HP IV L + +++ +E+ GG + + +E L+E + + Q
Sbjct: 66 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQ 125
Query: 78 IAMALQYLHS 87
+ AL +LHS
Sbjct: 126 MLEALNFLHS 135
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 32.7 bits (73), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 24 KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA---CVKLSEETCKCIVYQIAM 80
K L H NIV S I +F+E V GG L + + + +K +E+T QI
Sbjct: 60 KHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILE 119
Query: 81 ALQYLHS 87
L+YLH
Sbjct: 120 GLKYLHD 126
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 32.7 bits (73), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 25/50 (50%)
Query: 13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA 62
RK F E + L +L H +IV Y D + M EY++ GDL + A
Sbjct: 61 RKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRA 110
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 32.7 bits (73), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 24 KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA---CVKLSEETCKCIVYQIAM 80
K L H NIV S I +F+E V GG L + + + +K +E+T QI
Sbjct: 74 KHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILE 133
Query: 81 ALQYLHS 87
L+YLH
Sbjct: 134 GLKYLHD 140
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 32.3 bits (72), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS--KIEACVKLSEETCKC 73
F E + +K L H +V LY +V+ ++ IY+ EY++ G L K + +KL+
Sbjct: 63 FLAEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 121
Query: 74 IVYQIAMALQYLH 86
+ QIA + ++
Sbjct: 122 MAAQIAEGMAFIE 134
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 32.3 bits (72), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGD---LKSKIEACVKLSEETCK 72
F E D L + I TL+ + +N+Y+ ++Y GGD L SK E +L EE +
Sbjct: 121 FREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFED--RLPEEMAR 178
Query: 73 CIVYQIAMALQYLHSLMSVNQH-KPRYI 99
+ ++ +A+ +H L V++ KP I
Sbjct: 179 FYLAEMVIAIDSVHQLHYVHRDIKPDNI 206
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 32.3 bits (72), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS--KIEACVKLSEETCKC 73
F E + +K L H +V LY +V+ ++ IY+ EY++ G L K + +KL+
Sbjct: 51 FLAEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 109
Query: 74 IVYQIAMALQYLH 86
+ QIA + ++
Sbjct: 110 MAAQIAEGMAFIE 122
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 32.3 bits (72), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS--KIEACVKLSEETCKC 73
F E + +K L H +V LY +V+ ++ IY+ EY++ G L K + +KL+
Sbjct: 61 FLAEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 74 IVYQIAMALQYLH 86
+ QIA + ++
Sbjct: 120 MAAQIAEGMAFIE 132
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 32.3 bits (72), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS--KIEACVKLSEETCKC 73
F E + +K L H +V LY +V+ ++ IY+ EY++ G L K + +KL+
Sbjct: 65 FLAEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 123
Query: 74 IVYQIAMALQYLH 86
+ QIA + ++
Sbjct: 124 MAAQIAEGMAFIE 136
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 32.3 bits (72), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS--KIEACVKLSEETCKC 73
F E + +K L H +V LY +V+ ++ IY+ EY++ G L K + +KL+
Sbjct: 64 FLAEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 122
Query: 74 IVYQIAMALQYLH 86
+ QIA + ++
Sbjct: 123 MAAQIAEGMAFIE 135
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 32.3 bits (72), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS--KIEACVKLSEETCKC 73
F E + +K L H +V LY +V+ ++ IY+ EY++ G L K + +KL+
Sbjct: 55 FLAEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 74 IVYQIAMALQYLH 86
+ QIA + ++
Sbjct: 114 MAAQIAEGMAFIE 126
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 32.3 bits (72), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQ 77
E+ LK L H NIV L++ + + + E+ DLK ++C L E K ++Q
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD-QDLKKYFDSCNGDLDPEIVKSFLFQ 109
Query: 78 IAMALQYLHS 87
+ L + HS
Sbjct: 110 LLKGLGFCHS 119
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 32.3 bits (72), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS--KIEACVKLSEETCKC 73
F E + +K L H +V LY +V+ ++ IY+ EY++ G L K + +KL+
Sbjct: 60 FLAEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 118
Query: 74 IVYQIAMALQYLH 86
+ QIA + ++
Sbjct: 119 MAAQIAEGMAFIE 131
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 32.3 bits (72), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS--KIEACVKLSEETCKC 73
F E + +K L H +V LY +V+ ++ IY+ EY++ G L K + +KL+
Sbjct: 55 FLAEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 74 IVYQIAMALQYLH 86
+ QIA + ++
Sbjct: 114 MAAQIAEGMAFIE 126
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 32.3 bits (72), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS--KIEACVKLSEETCKC 73
F E + +K L H +V LY +V+ ++ IY+ EY++ G L K + +KL+
Sbjct: 61 FLAEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 74 IVYQIAMALQYLH 86
+ QIA + ++
Sbjct: 120 MAAQIAEGMAFIE 132
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 32.3 bits (72), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS--KIEACVKLSEETCKC 73
F E + +K L H +V LY +V+ ++ IY+ EY++ G L K + +KL+
Sbjct: 50 FLAEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 108
Query: 74 IVYQIAMALQYLH 86
+ QIA + ++
Sbjct: 109 MAAQIAEGMAFIE 121
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 32.3 bits (72), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 45/75 (60%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + +++ KL+++ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNNIVKSQ-KLTDDHVQ 128
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 129 FLIYQILRGLKYIHS 143
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 32.3 bits (72), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
E+ L P + Y S L +++ +EY+ GG +E L E I+ +
Sbjct: 69 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILRE 127
Query: 78 IAMALQYLHS 87
I L YLHS
Sbjct: 128 ILKGLDYLHS 137
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 32.3 bits (72), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS--KIEACVKLSEETCKC 73
F E + +K L H +V LY +V+ ++ IY+ EY++ G L K + +KL+
Sbjct: 56 FLAEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 114
Query: 74 IVYQIAMALQYLH 86
+ QIA + ++
Sbjct: 115 MAAQIAEGMAFIE 127
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 32.3 bits (72), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
E+ L P + Y S L +++ +EY+ GG +E L E I+ +
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILRE 112
Query: 78 IAMALQYLHS 87
I L YLHS
Sbjct: 113 ILKGLDYLHS 122
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 32.3 bits (72), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
E+ L P + Y S L +++ +EY+ GG +E L E I+ +
Sbjct: 74 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILRE 132
Query: 78 IAMALQYLHS 87
I L YLHS
Sbjct: 133 ILKGLDYLHS 142
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 32.3 bits (72), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS--KIEACVKLSEETCKC 73
F E + +K L H +V LY +V+ ++ IY+ EY++ G L K + +KL+
Sbjct: 57 FLAEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 115
Query: 74 IVYQIAMALQYLH 86
+ QIA + ++
Sbjct: 116 MAAQIAEGMAFIE 128
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 32.3 bits (72), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
E+ L P + Y S L +++ +EY+ GG +E L E I+ +
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-PLDETQIATILRE 112
Query: 78 IAMALQYLHS 87
I L YLHS
Sbjct: 113 ILKGLDYLHS 122
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 32.3 bits (72), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS--KIEACVKLSEETCKC 73
F E + +K L H +V LY +V+ ++ IY+ EY++ G L K + +KL+
Sbjct: 55 FLAEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 74 IVYQIAMALQYLH 86
+ QIA + ++
Sbjct: 114 MAAQIAEGMAFIE 126
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 32.3 bits (72), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCIVYQ 77
E+ LK L H NIV L++ + + + E+ DLK ++C L E K ++Q
Sbjct: 51 EICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD-QDLKKYFDSCNGDLDPEIVKSFLFQ 109
Query: 78 IAMALQYLHS 87
+ L + HS
Sbjct: 110 LLKGLGFCHS 119
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 32.3 bits (72), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSH-PNIVTLYESVLWKDNIYMFLEYVQGGDLKSK 59
+K ++ K++ + FA E++ L L H PNI+ L + + +Y+ +EY G+L
Sbjct: 54 IKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDF 113
Query: 60 IEACVKLSEETCKCIVYQIAMAL---QYLH 86
+ L + I A L Q LH
Sbjct: 114 LRKSRVLETDPAFAIANSTASTLSSQQLLH 143
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 32.3 bits (72), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS--KIEACVKLSEETCKC 73
F E + +K L H +V LY +V+ ++ IY+ EY++ G L K + +KL+
Sbjct: 55 FLAEANLMKQLQHQRLVRLY-AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 74 IVYQIAMALQYLH 86
+ QIA + ++
Sbjct: 114 MAAQIAEGMAFIE 126
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 32.3 bits (72), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 14 KYFANEVDNLKSLSHPNIVTLYE-----SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
K E+ L L I+ LY+ +L D +Y+ LE + DLK + + L+E
Sbjct: 70 KRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLE-IADSDLKKLFKTPIFLTE 128
Query: 69 ETCKCIVYQIAMALQYLH 86
E K I+Y + + ++H
Sbjct: 129 EHIKTILYNLLLGENFIH 146
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 32.0 bits (71), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
F E +K + HPN+V L + Y+ +E++ G+L + C + E + ++
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVSAVVLL 114
Query: 76 Y---QIAMALQYL 85
Y QI+ A++YL
Sbjct: 115 YMATQISSAMEYL 127
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 32.0 bits (71), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 12 NRKYFANEVDNL-KSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEET 70
+R EV+ L + + NI+ L E Y+ E +QGG + + I+ +E
Sbjct: 53 SRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNERE 112
Query: 71 CKCIVYQIAMALQYLHS 87
+V +A AL +LH+
Sbjct: 113 ASRVVRDVAAALDFLHT 129
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 32.0 bits (71), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSH-PNIVTLYESVLWKDNIYMFLEYVQGGDLKSK 59
+K ++ K++ + FA E++ L L H PNI+ L + + +Y+ +EY G+L
Sbjct: 47 IKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDF 106
Query: 60 IEACVKLSEETCKCIVYQIAMAL---QYLH 86
+ L + I A L Q LH
Sbjct: 107 LRKSRVLETDPAFAIANSTASTLSSQQLLH 136
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 32.0 bits (71), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSH-PNIVTLYESVLWKDNIYMFLEYVQGGDLKSK 59
+K ++ K++ + FA E++ L L H PNI+ L + + +Y+ +EY G+L
Sbjct: 57 IKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDF 116
Query: 60 IEACVKLSEETCKCIVYQIAMAL---QYLH 86
+ L + I A L Q LH
Sbjct: 117 LRKSRVLETDPAFAIANSTASTLSSQQLLH 146
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 32.0 bits (71), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
F E +K + HPN+V L + Y+ +E++ G+L + C + E + ++
Sbjct: 54 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVSAVVLL 112
Query: 76 Y---QIAMALQYL 85
Y QI+ A++YL
Sbjct: 113 YMATQISSAMEYL 125
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 32.0 bits (71), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 4/73 (5%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
F E +K + HPN+V L + Y+ +E++ G+L + C + E + ++
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVSAVVLL 114
Query: 76 Y---QIAMALQYL 85
Y QI+ A++YL
Sbjct: 115 YMATQISSAMEYL 127
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + ++ KL+++ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNNIVKXQ-KLTDDHVQ 128
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 129 FLIYQILRGLKYIHS 143
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 44/75 (58%), Gaps = 8/75 (10%)
Query: 19 EVDNLKSLSHPNIVTLYE------SVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + S+ +++Y+ + ++ G DL + ++ KL+++ +
Sbjct: 71 ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYL-VTHLMGADLNNIVKXQ-KLTDDHVQ 128
Query: 73 CIVYQIAMALQYLHS 87
++YQI L+Y+HS
Sbjct: 129 FLIYQILRGLKYIHS 143
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
F E +K + HPN+V L + Y+ E++ G+L + C + E + ++
Sbjct: 263 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLL 321
Query: 76 Y---QIAMALQYL 85
Y QI+ A++YL
Sbjct: 322 YMATQISSAMEYL 334
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 18/99 (18%)
Query: 10 KENRKYFANEVDNLKSL----------SHPNIVTLYESVLWKDNIYMFL--EYVQGGDLK 57
K ++K A VD +L H ++V + + W ++ +M + EY GG L
Sbjct: 38 KRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSA--WAEDDHMLIQNEYCNGGSLA 95
Query: 58 SKIEACVKL----SEETCKCIVYQIAMALQYLHSLMSVN 92
I ++ E K ++ Q+ L+Y+HS+ V+
Sbjct: 96 DAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVH 134
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 18/99 (18%)
Query: 10 KENRKYFANEVDNLKSL----------SHPNIVTLYESVLWKDNIYMFL--EYVQGGDLK 57
K ++K A VD +L H ++V + + W ++ +M + EY GG L
Sbjct: 42 KRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSA--WAEDDHMLIQNEYCNGGSLA 99
Query: 58 SKIEACVKL----SEETCKCIVYQIAMALQYLHSLMSVN 92
I ++ E K ++ Q+ L+Y+HS+ V+
Sbjct: 100 DAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVH 138
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 47/117 (40%), Gaps = 25/117 (21%)
Query: 29 PNIVTLYESVLWKDNI----YMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQY 84
PNI+TL + V KD + + E+V D K + L++ + +Y+I AL Y
Sbjct: 92 PNIITLADIV--KDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDY 146
Query: 85 LHS-------------LMSVNQHKPRYIAWKVGSILAGGKLYFIENRQVRSGNVNGP 128
HS L+ K R I W + G+ Y N +V S GP
Sbjct: 147 CHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGP 200
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 25/117 (21%)
Query: 29 PNIVTLYESVLWKDNI----YMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQY 84
PNI+TL + V KD + + E+V D K + L++ + +Y+I AL Y
Sbjct: 90 PNIITLADIV--KDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDY 144
Query: 85 LHSL------------MSVNQH-KPRYIAWKVGSILAGGKLYFIENRQVRSGNVNGP 128
HS+ M ++H K R I W + G+ Y N +V S GP
Sbjct: 145 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGP 198
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 18/99 (18%)
Query: 10 KENRKYFANEVDNLKSL----------SHPNIVTLYESVLWKDNIYMFL--EYVQGGDLK 57
K ++K A VD +L H ++V + + W ++ +M + EY GG L
Sbjct: 40 KRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSA--WAEDDHMLIQNEYCNGGSLA 97
Query: 58 SKIEACVKL----SEETCKCIVYQIAMALQYLHSLMSVN 92
I ++ E K ++ Q+ L+Y+HS+ V+
Sbjct: 98 DAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVH 136
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 25/117 (21%)
Query: 29 PNIVTLYESVLWKDNI----YMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQY 84
PNI+TL + V KD + + E+V D K + L++ + +Y+I AL Y
Sbjct: 91 PNIITLADIV--KDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDY 145
Query: 85 LHSL------------MSVNQH-KPRYIAWKVGSILAGGKLYFIENRQVRSGNVNGP 128
HS+ M ++H K R I W + G+ Y N +V S GP
Sbjct: 146 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGP 199
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 25/117 (21%)
Query: 29 PNIVTLYESVLWKDNI----YMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQY 84
PNI+TL + V KD + + E+V D K + L++ + +Y+I AL Y
Sbjct: 92 PNIITLADIV--KDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDY 146
Query: 85 LHSL------------MSVNQH-KPRYIAWKVGSILAGGKLYFIENRQVRSGNVNGP 128
HS+ M ++H K R I W + G+ Y N +V S GP
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGP 200
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
F E +K + HPN+V L + Y+ +E++ G+L + C + E ++
Sbjct: 57 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVNAVVLL 115
Query: 76 Y---QIAMALQYL 85
Y QI+ A++YL
Sbjct: 116 YMATQISSAMEYL 128
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 25/117 (21%)
Query: 29 PNIVTLYESVLWKDNI----YMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQY 84
PNI+TL + V KD + + E+V D K + L++ + +Y+I AL Y
Sbjct: 92 PNIITLADIV--KDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDY 146
Query: 85 LHSL------------MSVNQH-KPRYIAWKVGSILAGGKLYFIENRQVRSGNVNGP 128
HS+ M ++H K R I W + G+ Y N +V S GP
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGP 200
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEY-----VQGGDLKSKIEACVKLSEETCK 72
E+ LK + H N++ L + + + F ++ G DL K+ KL E+ +
Sbjct: 73 RELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDL-GKLMKHEKLGEDRIQ 131
Query: 73 CIVYQIAMALQYLHS 87
+VYQ+ L+Y+H+
Sbjct: 132 FLVYQMLKGLRYIHA 146
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 25/117 (21%)
Query: 29 PNIVTLYESVLWKDNI----YMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQY 84
PNI+TL + V KD + + E+V D K + L++ + +Y+I AL Y
Sbjct: 92 PNIITLADIV--KDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDY 146
Query: 85 LHSL------------MSVNQH-KPRYIAWKVGSILAGGKLYFIENRQVRSGNVNGP 128
HS+ M ++H K R I W + G+ Y N +V S GP
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGP 200
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLW---KDNIYMFLEYVQGGDLK 57
+K++Q++ + E+ + F E++ LKSL H NIV Y+ V + + N+ + +EY+ G L+
Sbjct: 62 VKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 58 SKIEACVKLSEETCKCIVY--QIAMALQYL 85
++ K + K + Y QI ++YL
Sbjct: 120 DYLQKH-KERIDHIKLLQYTSQICKGMEYL 148
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 25/117 (21%)
Query: 29 PNIVTLYESVLWKDNI----YMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQY 84
PNI+TL + V KD + + E+V D K + L++ + +Y+I AL Y
Sbjct: 92 PNIITLADIV--KDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDY 146
Query: 85 LHSL------------MSVNQH-KPRYIAWKVGSILAGGKLYFIENRQVRSGNVNGP 128
HS+ M ++H K R I W + G+ Y N +V S GP
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGP 200
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 18/99 (18%)
Query: 10 KENRKYFANEVDNLKSL----------SHPNIVTLYESVLWKDNIYMFL--EYVQGGDLK 57
K ++K A VD +L H ++V + + W ++ +M + EY GG L
Sbjct: 40 KRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSA--WAEDDHMLIQNEYCNGGSLA 97
Query: 58 SKIEACVKL----SEETCKCIVYQIAMALQYLHSLMSVN 92
I ++ E K ++ Q+ L+Y+HS+ V+
Sbjct: 98 DAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVH 136
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 25/117 (21%)
Query: 29 PNIVTLYESVLWKDNI----YMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQY 84
PNI+TL + V KD + + E+V D K + L++ + +Y+I AL Y
Sbjct: 92 PNIITLADIV--KDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDY 146
Query: 85 LHSL------------MSVNQH-KPRYIAWKVGSILAGGKLYFIENRQVRSGNVNGP 128
HS+ M ++H K R I W + G+ Y N +V S GP
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGP 200
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 25/117 (21%)
Query: 29 PNIVTLYESVLWKDNI----YMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQY 84
PNI+TL + V KD + + E+V D K + L++ + +Y+I AL Y
Sbjct: 92 PNIITLADIV--KDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDY 146
Query: 85 LHSL------------MSVNQH-KPRYIAWKVGSILAGGKLYFIENRQVRSGNVNGP 128
HS+ M ++H K R I W + G+ Y N +V S GP
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGP 200
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 25/117 (21%)
Query: 29 PNIVTLYESVLWKDNI----YMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQY 84
PNI+TL + V KD + + E+V D K + L++ + +Y+I AL Y
Sbjct: 91 PNIITLADIV--KDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDY 145
Query: 85 LHSL------------MSVNQH-KPRYIAWKVGSILAGGKLYFIENRQVRSGNVNGP 128
HS+ M ++H K R I W + G+ Y N +V S GP
Sbjct: 146 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGP 199
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
F E +K + HPN+V L + Y+ +E++ G+L + C + E ++
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNR-QEVNAVVLL 119
Query: 76 Y---QIAMALQYL 85
Y QI+ A++YL
Sbjct: 120 YMATQISSAMEYL 132
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDL 56
F E + +K+L H +V LY V ++ IY+ EY+ G L
Sbjct: 55 FLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSL 95
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 25/117 (21%)
Query: 29 PNIVTLYESVLWKDNI----YMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQY 84
PNI+TL + V KD + + E+V D K + L++ + +Y+I AL Y
Sbjct: 92 PNIITLADIV--KDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDY 146
Query: 85 LHSL------------MSVNQH-KPRYIAWKVGSILAGGKLYFIENRQVRSGNVNGP 128
HS+ M ++H K R I W + G+ Y N +V S GP
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGP 200
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 25/117 (21%)
Query: 29 PNIVTLYESVLWKDNI----YMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQY 84
PNI+TL + V KD + + E+V D K + L++ + +Y+I AL Y
Sbjct: 92 PNIITLADIV--KDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDY 146
Query: 85 LHSL------------MSVNQH-KPRYIAWKVGSILAGGKLYFIENRQVRSGNVNGP 128
HS+ M ++H K R I W + G+ Y N +V S GP
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGP 200
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLW---KDNIYMFLEYVQGGDLK 57
+K++Q++ + E+ + F E++ LKSL H NIV Y+ V + + N+ + +EY+ G L+
Sbjct: 62 VKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 58 SKIEACVKLSEETCKCIVY--QIAMALQYL 85
++ K + K + Y QI ++YL
Sbjct: 120 DYLQKH-KERIDHIKLLQYTSQICKGMEYL 148
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLW---KDNIYMFLEYVQGGDLK 57
+K++Q++ + E+ + F E++ LKSL H NIV Y+ V + + N+ + +EY+ G L+
Sbjct: 45 VKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYGSLR 102
Query: 58 SKIEACVKLSEETCKCIVY--QIAMALQYL 85
++ K + K + Y QI ++YL
Sbjct: 103 DYLQKH-KERIDHIKLLQYTSQICKGMEYL 131
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
F E +K + HPN+V L + Y+ E++ G+L + C + E + ++
Sbjct: 54 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLL 112
Query: 76 Y---QIAMALQYL 85
Y QI+ A++YL
Sbjct: 113 YMATQISSAMEYL 125
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
F E +K + HPN+V L + Y+ E++ G+L + C + E + ++
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLL 119
Query: 76 Y---QIAMALQYL 85
Y QI+ A++YL
Sbjct: 120 YMATQISSAMEYL 132
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLW---KDNIYMFLEYVQGGDLK 57
+K++Q++ + E+ + F E++ LKSL H NIV Y+ V + + N+ + +EY+ G L+
Sbjct: 44 VKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 58 SKIEACVKLSEETCKCIVY--QIAMALQYL 85
++ K + K + Y QI ++YL
Sbjct: 102 DYLQKH-KERIDHIKLLQYTSQICKGMEYL 130
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
F E +K + HPN+V L + Y+ E++ G+L + C + E + ++
Sbjct: 54 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLL 112
Query: 76 Y---QIAMALQYL 85
Y QI+ A++YL
Sbjct: 113 YMATQISSAMEYL 125
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
F E +K + HPN+V L + Y+ E++ G+L + C + E + ++
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLL 114
Query: 76 Y---QIAMALQYL 85
Y QI+ A++YL
Sbjct: 115 YMATQISSAMEYL 127
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 25/117 (21%)
Query: 29 PNIVTLYESVLWKDNI----YMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQY 84
PNI+TL + V KD + + E+V D K + L++ + +Y+I AL Y
Sbjct: 97 PNIITLADIV--KDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDY 151
Query: 85 LHSL------------MSVNQH-KPRYIAWKVGSILAGGKLYFIENRQVRSGNVNGP 128
HS+ M ++H K R I W + G+ Y N +V S GP
Sbjct: 152 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGP 205
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLW---KDNIYMFLEYVQGGDLK 57
+K++Q++ + E+ + F E++ LKSL H NIV Y+ V + + N+ + +EY+ G L+
Sbjct: 50 VKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYGSLR 107
Query: 58 SKIEACVKLSEETCKCIVY--QIAMALQYL 85
++ K + K + Y QI ++YL
Sbjct: 108 DYLQKH-KERIDHIKLLQYTSQICKGMEYL 136
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLW---KDNIYMFLEYVQGGDLK 57
+K++Q++ + E+ + F E++ LKSL H NIV Y+ V + + N+ + +EY+ G L+
Sbjct: 49 VKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYGSLR 106
Query: 58 SKIEACVKLSEETCKCIVY--QIAMALQYL 85
++ K + K + Y QI ++YL
Sbjct: 107 DYLQKH-KERIDHIKLLQYTSQICKGMEYL 135
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 25/117 (21%)
Query: 29 PNIVTLYESVLWKDNI----YMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQY 84
PNI+TL + V KD + + E+V D K + L++ + +Y+I AL Y
Sbjct: 92 PNIITLADIV--KDPVSRTPALVFEHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDY 146
Query: 85 LHSL------------MSVNQH-KPRYIAWKVGSILAGGKLYFIENRQVRSGNVNGP 128
HS+ M ++H K R I W + G+ Y N +V S GP
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGP 200
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLW---KDNIYMFLEYVQGGDLK 57
+K++Q++ + E+ + F E++ LKSL H NIV Y+ V + + N+ + +EY+ G L+
Sbjct: 44 VKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 58 SKIEACVKLSEETCKCIVY--QIAMALQYL 85
++ K + K + Y QI ++YL
Sbjct: 102 DYLQKH-KERIDHIKLLQYTSQICKGMEYL 130
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLW---KDNIYMFLEYVQGGDLK 57
+K++Q++ + E+ + F E++ LKSL H NIV Y+ V + + N+ + +EY+ G L+
Sbjct: 75 VKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYGSLR 132
Query: 58 SKIEACVKLSEETCKCIVY--QIAMALQYL 85
++ K + K + Y QI ++YL
Sbjct: 133 DYLQKH-KERIDHIKLLQYTSQICKGMEYL 161
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLW---KDNIYMFLEYVQGGDLK 57
+K++Q++ + E+ + F E++ LKSL H NIV Y+ V + + N+ + +EY+ G L+
Sbjct: 44 VKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 58 SKIEACVKLSEETCKCIVY--QIAMALQYL 85
++ K + K + Y QI ++YL
Sbjct: 102 DYLQKH-KERIDHIKLLQYTSQICKGMEYL 130
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
F E +K + HPN+V L + Y+ E++ G+L + C + E + ++
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVSAVVLL 114
Query: 76 Y---QIAMALQYL 85
Y QI+ A++YL
Sbjct: 115 YMATQISSAMEYL 127
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLW---KDNIYMFLEYVQGGDLK 57
+K++Q++ + E+ + F E++ LKSL H NIV Y+ V + + N+ + +EY+ G L+
Sbjct: 42 VKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYGSLR 99
Query: 58 SKIEACVKLSEETCKCIVY--QIAMALQYL 85
++ K + K + Y QI ++YL
Sbjct: 100 DYLQKH-KERIDHIKLLQYTSQICKGMEYL 128
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
F E +K + HPN+V L + Y+ E++ G+L + C + E ++
Sbjct: 302 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLL 360
Query: 76 Y---QIAMALQYL 85
Y QI+ A++YL
Sbjct: 361 YMATQISSAMEYL 373
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLW---KDNIYMFLEYVQGGDLK 57
+K++Q++ + E+ + F E++ LKSL H NIV Y+ V + + N+ + +EY+ G L+
Sbjct: 51 VKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYGSLR 108
Query: 58 SKIEACVKLSEETCKCIVY--QIAMALQYL 85
++ K + K + Y QI ++YL
Sbjct: 109 DYLQKH-KERIDHIKLLQYTSQICKGMEYL 137
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLW---KDNIYMFLEYVQGGDLK 57
+K++Q++ + E+ + F E++ LKSL H NIV Y+ V + + N+ + +EY+ G L+
Sbjct: 48 VKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYGSLR 105
Query: 58 SKIEACVKLSEETCKCIVY--QIAMALQYL 85
++ K + K + Y QI ++YL
Sbjct: 106 DYLQKH-KERIDHIKLLQYTSQICKGMEYL 134
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 30.8 bits (68), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLW---KDNIYMFLEYVQGGDLK 57
+K++Q++ + E+ + F E++ LKSL H NIV Y+ V + + N+ + +EY+ G L+
Sbjct: 47 VKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 58 SKIEACVKLSEETCKCIVY--QIAMALQYL 85
++ K + K + Y QI ++YL
Sbjct: 105 DYLQKH-KERIDHIKLLQYTSQICKGMEYL 133
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLW---KDNIYMFLEYVQGGDLK 57
+K++Q++ + E+ + F E++ LKSL H NIV Y+ V + + N+ + +EY+ G L+
Sbjct: 43 VKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEYLPYGSLR 100
Query: 58 SKIEACVKLSEETCKCIVY--QIAMALQYL 85
++ K + K + Y QI ++YL
Sbjct: 101 DYLQKH-KERIDHIKLLQYTSQICKGMEYL 129
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 14 KYFANEVDNLKSLSHPNIVTLY-----ESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
K E+ L L I+ L+ E +L D +Y+ LE + DLK + + L+E
Sbjct: 72 KRILREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTPIFLTE 130
Query: 69 ETCKCIVYQIAMALQYLH 86
+ K I+Y + + +++H
Sbjct: 131 QHVKTILYNLLLGEKFIH 148
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 9/86 (10%)
Query: 22 NLKSLSHPNIVTLYE--SVLWKDN---IYMFLEYVQGGDLKSKIEACVK--LSEETCKCI 74
+L++ HPN+V L++ +V D + + E+V DL + ++ + + ET K +
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDM 125
Query: 75 VYQIAMALQYLHSLMSVNQH-KPRYI 99
++Q+ L +LHS V++ KP+ I
Sbjct: 126 MFQLLRGLDFLHSHRVVHRDLKPQNI 151
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
F E +K + HPN+V L + Y+ E++ G+L + C + E ++
Sbjct: 260 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLL 318
Query: 76 Y---QIAMALQYL 85
Y QI+ A++YL
Sbjct: 319 YMATQISSAMEYL 331
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 25/117 (21%)
Query: 29 PNIVTLYESVLWKDNI----YMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQY 84
PNI+TL + V KD + + E+V D K + L++ + +Y+I AL Y
Sbjct: 92 PNIITLADIV--KDPVSRTPALVFEHVNNTDFKQLRQT---LTDYDIRFYMYEILKALDY 146
Query: 85 LHSL------------MSVNQH-KPRYIAWKVGSILAGGKLYFIENRQVRSGNVNGP 128
HS+ M ++H K R I W + G+ Y N +V S GP
Sbjct: 147 CHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEY---NVRVASRYFKGP 200
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACVKLSEETCKCIVY 76
E+ LK L HPNIV+L + + + + + E+++ DLK + E L + K +Y
Sbjct: 68 REISLLKELHHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLY 126
Query: 77 QIAMALQYLH 86
Q+ + + H
Sbjct: 127 QLLRGVAHCH 136
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 9/86 (10%)
Query: 22 NLKSLSHPNIVTLYE--SVLWKDN---IYMFLEYVQGGDLKSKIEACVK--LSEETCKCI 74
+L++ HPN+V L++ +V D + + E+V DL + ++ + + ET K +
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDM 125
Query: 75 VYQIAMALQYLHSLMSVNQH-KPRYI 99
++Q+ L +LHS V++ KP+ I
Sbjct: 126 MFQLLRGLDFLHSHRVVHRDLKPQNI 151
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 30.8 bits (68), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 47/86 (54%), Gaps = 9/86 (10%)
Query: 22 NLKSLSHPNIVTLYE--SVLWKDN---IYMFLEYVQGGDLKSKIEACVK--LSEETCKCI 74
+L++ HPN+V L++ +V D + + E+V DL + ++ + + ET K +
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDM 125
Query: 75 VYQIAMALQYLHSLMSVNQH-KPRYI 99
++Q+ L +LHS V++ KP+ I
Sbjct: 126 MFQLLRGLDFLHSHRVVHRDLKPQNI 151
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 30.8 bits (68), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI-EACVKLSEETCKCIVY 76
E+ LK L HPNIV+L + + + + + E+++ DLK + E L + K +Y
Sbjct: 68 REISLLKELHHPNIVSLIDVIHSERCLTLVFEFME-KDLKKVLDENKTGLQDSQIKIYLY 126
Query: 77 QIAMALQYLH 86
Q+ + + H
Sbjct: 127 QLLRGVAHCH 136
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 5 QNALDKENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDN---IYMFLEYVQGGDLKSKI 60
QN+ D + R + E+ L LS H NIV L +VL DN +Y+ +Y++ DL + I
Sbjct: 47 QNSTDAQ-RTF--REIMILTELSGHENIVNLL-NVLRADNDRDVYLVFDYMET-DLHAVI 101
Query: 61 EACVKLSEETCKCIVYQIAMALQYLHS 87
A + L + +VYQ+ ++YLHS
Sbjct: 102 RANI-LEPVHKQYVVYQLIKVIKYLHS 127
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFL-EYVQGGDLKS 58
+K ++ + R+ F +E + HPNI+ L E V+ + + M + EY++ G L +
Sbjct: 82 IKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL-EGVVTRGRLAMIVTEYMENGSLDT 139
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEET 70
+N++ F +E +K+L HP+IV L ++ ++ ++ +E G+L +E K S +
Sbjct: 67 DNKEKFMSEAVIMKNLDHPHIVKLI-GIIEEEPTWIIMELYPYGELGHYLER-NKNSLKV 124
Query: 71 CKCIVY--QIAMALQYLHSLMSVNQ 93
++Y QI A+ YL S+ V++
Sbjct: 125 LTLVLYSLQICKAMAYLESINCVHR 149
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 30.4 bits (67), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFL-EYVQGGDLKS 58
+K ++ + R+ F +E + HPNI+ L E V+ + + M + EY++ G L +
Sbjct: 82 IKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL-EGVVTRGRLAMIVTEYMENGSLDT 139
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
F E +K + HPN+V L + Y+ E++ G+L + C + E ++
Sbjct: 57 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLL 115
Query: 76 Y---QIAMALQYLH 86
Y QI+ A++YL
Sbjct: 116 YMATQISSAMEYLE 129
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEET 70
+N++ F +E +K+L HP+IV L ++ ++ ++ +E G+L +E K S +
Sbjct: 55 DNKEKFMSEAVIMKNLDHPHIVKLI-GIIEEEPTWIIMELYPYGELGHYLER-NKNSLKV 112
Query: 71 CKCIVY--QIAMALQYLHSLMSVNQ 93
++Y QI A+ YL S+ V++
Sbjct: 113 LTLVLYSLQICKAMAYLESINCVHR 137
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
F E +K + HPN+V L + Y+ E++ G+L + C + E ++
Sbjct: 60 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLL 118
Query: 76 Y---QIAMALQYL 85
Y QI+ A++YL
Sbjct: 119 YMATQISSAMEYL 131
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
F E +K + HPN+V L + Y+ E++ G+L + C + E ++
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLL 116
Query: 76 Y---QIAMALQYL 85
Y QI+ A++YL
Sbjct: 117 YMATQISSAMEYL 129
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 30.4 bits (67), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
F E +K + HPN+V L + Y+ E++ G+L + C + E ++
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLL 114
Query: 76 Y---QIAMALQYL 85
Y QI+ A++YL
Sbjct: 115 YMATQISSAMEYL 127
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 30.4 bits (67), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
F E +K + HPN+V L + Y+ E++ G+L + C + E ++
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLL 116
Query: 76 Y---QIAMALQYL 85
Y QI+ A++YL
Sbjct: 117 YMATQISSAMEYL 129
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 30.4 bits (67), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
F E +K + HPN+V L + Y+ E++ G+L + C + E ++
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLL 119
Query: 76 Y---QIAMALQYL 85
Y QI+ A++YL
Sbjct: 120 YMATQISSAMEYL 132
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 30.4 bits (67), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
F E +K + HPN+V L + Y+ E++ G+L + C + E ++
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLL 119
Query: 76 Y---QIAMALQYL 85
Y QI+ A++YL
Sbjct: 120 YMATQISSAMEYL 132
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 30.4 bits (67), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
F E +K + HPN+V L + Y+ E++ G+L + C + E ++
Sbjct: 69 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLL 127
Query: 76 Y---QIAMALQYL 85
Y QI+ A++YL
Sbjct: 128 YMATQISSAMEYL 140
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 30.4 bits (67), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 11 ENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEET 70
+N++ F +E +K+L HP+IV L ++ ++ ++ +E G+L +E K S +
Sbjct: 51 DNKEKFMSEAVIMKNLDHPHIVKLI-GIIEEEPTWIIMELYPYGELGHYLER-NKNSLKV 108
Query: 71 CKCIVY--QIAMALQYLHSLMSVNQ 93
++Y QI A+ YL S+ V++
Sbjct: 109 LTLVLYSLQICKAMAYLESINCVHR 133
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 30.4 bits (67), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
F E +K + HPN+V L + Y+ E++ G+L + C + E ++
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLL 119
Query: 76 Y---QIAMALQYL 85
Y QI+ A++YL
Sbjct: 120 YMATQISSAMEYL 132
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 30.4 bits (67), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K ++ ++ R+ F E + HPNI+ L V + + EY++ G L S
Sbjct: 66 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 123
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 30.4 bits (67), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
F E +K + HPN+V L + Y+ E++ G+L + C + E ++
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLL 114
Query: 76 Y---QIAMALQYL 85
Y QI+ A++YL
Sbjct: 115 YMATQISSAMEYL 127
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 30.4 bits (67), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 23 LKSLSHPNIVTLYESVLWKDNI------YMFLEYVQGGDLKSKIEACVKLSEETCKCIVY 76
LK + H N++ L + ++ Y+ + ++Q DL+ + +K SEE + +VY
Sbjct: 77 LKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIM--GLKFSEEKIQYLVY 133
Query: 77 QIAMALQYLHSLMSVNQH-KPRYIA 100
Q+ L+Y+HS V++ KP +A
Sbjct: 134 QMLKGLKYIHSAGVVHRDLKPGNLA 158
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 30.4 bits (67), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIV 75
F E +K + HPN+V L + Y+ E++ G+L + C + E ++
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNR-QEVNAVVLL 116
Query: 76 Y---QIAMALQYL 85
Y QI+ A++YL
Sbjct: 117 YMATQISSAMEYL 129
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 44/110 (40%), Gaps = 24/110 (21%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSL-SHPNIVTLYESVLWKDNIYMFLEYVQGGD---- 55
+K ++ D R+ +E+ + L SH NIV L + IY+ EY GD
Sbjct: 80 VKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNY 139
Query: 56 LKSKIEACVK-------------------LSEETCKCIVYQIAMALQYLH 86
L+SK E + L+ E C YQ+A +++L
Sbjct: 140 LRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE 189
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 16/119 (13%)
Query: 13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDN------------IYMFLEYVQGGDLKSKI 60
R+ EV L L HP IV + + L K+ +Y+ ++ + +LK +
Sbjct: 47 REKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM 106
Query: 61 EACVKLSEE---TCKCIVYQIAMALQYLHSLMSVNQH-KPRYIAWKVGSILAGGKLYFI 115
+ E C I QIA A+++LHS +++ KP I + + ++ G +
Sbjct: 107 NGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLV 165
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K ++ ++ R+ F E + HPNI+ L V + + EY++ G L S
Sbjct: 78 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K ++ ++ R+ F E + HPNI+ L V + + EY++ G L S
Sbjct: 78 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K ++ ++ R+ F E + HPNI+ L V + + EY++ G L S
Sbjct: 78 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K ++ ++ R+ F E + HPNI+ L V + + EY++ G L S
Sbjct: 49 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 106
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K ++ ++ R+ F E + HPNI+ L V + + EY++ G L S
Sbjct: 78 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K ++ ++ R+ F E + HPNI+ L V + + EY++ G L S
Sbjct: 78 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K ++ ++ R+ F E + HPNI+ L V + + EY++ G L S
Sbjct: 78 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 29/58 (50%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K +++ ++ R+ F +E + HPN++ L V + + E+++ G L S
Sbjct: 40 IKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 97
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 27 SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH 86
H N++ L E +D Y+ E ++GG + S I +E +V +A AL +LH
Sbjct: 69 GHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLH 128
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K ++ ++ R+ F E + HPNI+ L V + + EY++ G L S
Sbjct: 78 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 135
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K ++ ++ R+ F E + HPNI+ L V + + EY++ G L S
Sbjct: 76 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDS 133
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 30.0 bits (66), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%)
Query: 28 HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLH 86
H N++ L E +D Y+ E ++GG + S I +E +V +A AL +LH
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLH 128
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 30.0 bits (66), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 29/58 (50%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K +++ ++ R+ F +E + HPN++ L V + + E+++ G L S
Sbjct: 66 IKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDS 123
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 30.0 bits (66), Expect = 0.41, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 12/80 (15%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDN--IYMFLEYVQGGDLKSKI---------EACVKLS 67
E+ L+ L HPN+++L + L + +++ +Y + DL I + V+L
Sbjct: 68 EIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLP 126
Query: 68 EETCKCIVYQIAMALQYLHS 87
K ++YQI + YLH+
Sbjct: 127 RGMVKSLLYQILDGIHYLHA 146
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 30.0 bits (66), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDL 56
F E + +K+L H +V LY V ++ IY+ E++ G L
Sbjct: 54 FLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSL 94
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 29.6 bits (65), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Query: 18 NEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQ 77
E+ L P I + S L +++ +EY+ GG ++ L E I+ +
Sbjct: 66 QEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPG-PLEETYIATILRE 124
Query: 78 IAMALQYLHSLMSVNQ 93
I L YLHS +++
Sbjct: 125 ILKGLDYLHSERKIHR 140
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLW---KDNIYMFLEYVQGGDLK 57
+K++Q++ + E+ + F E++ LKSL H NIV Y+ V + + N+ + +E++ G L+
Sbjct: 47 VKKLQHSTE-EHLRDFEREIEILKSLQHDNIVK-YKGVCYSAGRRNLKLIMEFLPYGSLR 104
Query: 58 SKIEACVKLSEETCKCIVY--QIAMALQYL 85
++ K + K + Y QI ++YL
Sbjct: 105 EYLQKH-KERIDHIKLLQYTSQICKGMEYL 133
>pdb|3M3W|A Chain A, Crystal Strcuture Of Mouse Pacsin3 Bar Domain Mutant
pdb|3M3W|B Chain B, Crystal Strcuture Of Mouse Pacsin3 Bar Domain Mutant
Length = 320
Score = 29.6 bits (65), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 61 EACVKLSEETCKCIVYQIAMALQYLHSLMSVNQHKPRYI 99
E KL E +C M QY +L +N++ PRY+
Sbjct: 183 EQLRKLQERVGRCTKEAEKMKTQYEQTLAELNRYTPRYM 221
>pdb|3SYV|A Chain A, Crystal Structure Of Mpacsin 3 F-Bar Domain Mutant
pdb|3SYV|B Chain B, Crystal Structure Of Mpacsin 3 F-Bar Domain Mutant
pdb|3SYV|C Chain C, Crystal Structure Of Mpacsin 3 F-Bar Domain Mutant
pdb|3SYV|D Chain D, Crystal Structure Of Mpacsin 3 F-Bar Domain Mutant
pdb|3SYV|E Chain E, Crystal Structure Of Mpacsin 3 F-Bar Domain Mutant
pdb|3SYV|F Chain F, Crystal Structure Of Mpacsin 3 F-Bar Domain Mutant
pdb|3SYV|G Chain G, Crystal Structure Of Mpacsin 3 F-Bar Domain Mutant
pdb|3SYV|H Chain H, Crystal Structure Of Mpacsin 3 F-Bar Domain Mutant
Length = 347
Score = 29.6 bits (65), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 61 EACVKLSEETCKCIVYQIAMALQYLHSLMSVNQHKPRYI 99
E KL E +C M QY +L +N++ PRY+
Sbjct: 189 EQLRKLQERVGRCTKEAEKMKTQYEQTLAELNRYTPRYM 227
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 29.6 bits (65), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK-LSEETCKCIVYQ 77
E+ ++ P++V Y S ++++ +EY G + I K L+E+ I+
Sbjct: 74 EISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQS 133
Query: 78 IAMALQYLHSLMSVNQ 93
L+YLH + +++
Sbjct: 134 TLKGLEYLHFMRKIHR 149
>pdb|3QE6|A Chain A, Mouse Pacsin 3 F-Bar Domain Structure
pdb|3QE6|B Chain B, Mouse Pacsin 3 F-Bar Domain Structure
Length = 304
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 61 EACVKLSEETCKCIVYQIAMALQYLHSLMSVNQHKPRYI 99
E KL E +C M QY +L +N++ PRY+
Sbjct: 183 EQLRKLQERVGRCTKEAEKMKTQYEQTLAELNRYTPRYM 221
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 29.3 bits (64), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K ++ + R+ F +E + HPNI+ L V + + E+++ G L S
Sbjct: 49 IKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 106
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 29.3 bits (64), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K ++ + R+ F +E + HPNI+ L V + + E+++ G L S
Sbjct: 47 IKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS 104
>pdb|1K8K|A Chain A, Crystal Structure Of Arp23 COMPLEX
pdb|1TYQ|A Chain A, Crystal Structure Of Arp23 COMPLEX WITH BOUND ATP AND
Calcium
pdb|1U2V|A Chain A, Crystal Structure Of Arp23 COMPLEX WITH BOUND ADP AND
Calcium
pdb|2P9I|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp And Crosslinked With Gluteraldehyde
pdb|2P9K|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Atp And Crosslinked With Glutaraldehyde
pdb|2P9L|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX
pdb|2P9N|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp
pdb|2P9P|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp
pdb|2P9S|A Chain A, Structure Of Bovine Arp23 COMPLEX CO-Crystallized With
AtpMG2+
pdb|2P9U|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Amp-Pnp And Calcium
pdb|3DXK|A Chain A, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR
Ck0944636
pdb|3DXM|A Chain A, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR
Ck0993548
pdb|3RSE|A Chain A, Structural And Biochemical Characterization Of Two Binding
Sites For Nucleation Promoting Factor Wasp-Vca On Arp23
COMPLEX
pdb|3UKR|A Chain A, Crystal Structure Of Bos Taurus Arp2/3 Complex With Bound
Inhibitor Ck-666
pdb|3UKU|A Chain A, Structure Of Arp2/3 Complex With Bound Inhibitor Ck-869
pdb|3ULE|A Chain A, Structure Of Bos Taurus Arp2/3 Complex With Bound
Inhibitor Ck-869 And Atp
Length = 418
Score = 29.3 bits (64), Expect = 0.70, Method: Composition-based stats.
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 34 LYESVLWKDNIYMFLEYVQ--GGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSLMSV 91
LY++++ MF ++ + DLK ++A +KLSEE + + +Q +
Sbjct: 315 LYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQV------I 368
Query: 92 NQHKPRYIAWKVGSILAGGKLYF 114
H RY W GS+LA ++
Sbjct: 369 THHMQRYAVWFGGSMLASTPEFY 391
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 29.3 bits (64), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K ++ ++ R+ F E + HPNI+ L V + + EY++ G L +
Sbjct: 55 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDT 112
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 28.9 bits (63), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Query: 13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
R E+ L + P IV Y + I + +E++ GG L ++ ++ EE
Sbjct: 58 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG 117
Query: 73 CIVYQIAMALQYL---HSLM 89
+ + L YL H +M
Sbjct: 118 KVSIAVLRGLAYLREKHQIM 137
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 28.9 bits (63), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 45/85 (52%), Gaps = 10/85 (11%)
Query: 23 LKSLSHPNIVTLYESVLWKDNI------YMFLEYVQGGDLKSKIEACVKLSEETCKCIVY 76
LK + H N++ L + ++ Y+ + ++Q DL+ + ++ SEE + +VY
Sbjct: 95 LKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQT-DLQKIM--GMEFSEEKIQYLVY 151
Query: 77 QIAMALQYLHSLMSVNQH-KPRYIA 100
Q+ L+Y+HS V++ KP +A
Sbjct: 152 QMLKGLKYIHSAGVVHRDLKPGNLA 176
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 28.9 bits (63), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K ++ + R+ F +E + HPNI+ L V + + EY++ G L +
Sbjct: 41 IKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 98
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 28.9 bits (63), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGD---LKSKIEACVKLSEETCK 72
F E D L + I L+ + ++++Y+ ++Y GGD L SK E KL E+ +
Sbjct: 137 FREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFED--KLPEDMAR 194
Query: 73 CIVYQIAMALQYLHSLMSVNQH-KP 96
+ ++ +A+ +H L V++ KP
Sbjct: 195 FYIGEMVLAIDSIHQLHYVHRDIKP 219
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 28.9 bits (63), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K ++ + R+ F +E + HPNI+ L V + + EY++ G L +
Sbjct: 47 IKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 104
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 28.9 bits (63), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGD---LKSKIEACVKLSEETCK 72
F E D L + I L+ + ++++Y+ ++Y GGD L SK E KL E+ +
Sbjct: 121 FREERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFED--KLPEDMAR 178
Query: 73 CIVYQIAMALQYLHSLMSVNQ 93
+ ++ +A+ +H L V++
Sbjct: 179 FYIGEMVLAIDSIHQLHYVHR 199
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 28.9 bits (63), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 16/103 (15%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDL---- 56
+K +++ + R+ F +E L HPN+V L V + M Y GDL
Sbjct: 44 IKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 103
Query: 57 ----------KSKIEACVKLSEETCKCI--VYQIAMALQYLHS 87
+ + VK + E + V QIA ++YL S
Sbjct: 104 VMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS 146
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 28.9 bits (63), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 9 DKENRKYFANEVDNLKSLS-HPNIVTL--------YESVLWKDNIYMFLEYVQGG--DLK 57
++E + EV +K LS HPNIV ES + + E +G +
Sbjct: 65 EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFL 124
Query: 58 SKIEACVKLSEETCKCIVYQIAMALQYLH 86
K+E+ LS +T I YQ A+Q++H
Sbjct: 125 KKMESRGPLSCDTVLKIFYQTCRAVQHMH 153
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 28.9 bits (63), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K ++ + R+ F +E + HPNI+ L V + + EY++ G L +
Sbjct: 62 IKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDA 119
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 28.5 bits (62), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 41/103 (39%), Gaps = 16/103 (15%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDL---- 56
+K +++ + R+ F +E L HPN+V L V + M Y GDL
Sbjct: 61 IKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 120
Query: 57 ----------KSKIEACVKLSEETCKCI--VYQIAMALQYLHS 87
+ + VK + E + V QIA ++YL S
Sbjct: 121 VMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS 163
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 31 IVTLYESV-LWKDNIYMFLEYVQGGDLKSKIE--ACVKLSEETCKCIVYQIAMALQYLHS 87
IV +YE++ + + + +E + GG+L S+I+ +E I+ I A+QYLHS
Sbjct: 90 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 149
Query: 88 L 88
+
Sbjct: 150 I 150
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 31 IVTLYESV-LWKDNIYMFLEYVQGGDLKSKIE--ACVKLSEETCKCIVYQIAMALQYLHS 87
IV +YE++ + + + +E + GG+L S+I+ +E I+ I A+QYLHS
Sbjct: 76 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 135
Query: 88 L 88
+
Sbjct: 136 I 136
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 28.5 bits (62), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 31 IVTLYESV-LWKDNIYMFLEYVQGGDLKSKIE--ACVKLSEETCKCIVYQIAMALQYLHS 87
IV +YE++ + + + +E + GG+L S+I+ +E I+ I A+QYLHS
Sbjct: 120 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 179
Query: 88 L 88
+
Sbjct: 180 I 180
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 31 IVTLYESV-LWKDNIYMFLEYVQGGDLKSKIE--ACVKLSEETCKCIVYQIAMALQYLHS 87
IV +YE++ + + + +E + GG+L S+I+ +E I+ I A+QYLHS
Sbjct: 126 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 185
Query: 88 L 88
+
Sbjct: 186 I 186
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 31 IVTLYESV-LWKDNIYMFLEYVQGGDLKSKIE--ACVKLSEETCKCIVYQIAMALQYLHS 87
IV +YE++ + + + +E + GG+L S+I+ +E I+ I A+QYLHS
Sbjct: 76 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 135
Query: 88 L 88
+
Sbjct: 136 I 136
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
L R+ + E+ +SL+H ++V + D +++ LE + L + L+
Sbjct: 78 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 137
Query: 68 EETCKCIVYQIAMALQYLHSLMSVNQHKPRYIAWKVGSILAGGKLYFIENRQVRSGN 124
E + + QI + QYLH +++ L G L+ E+ +V+ G+
Sbjct: 138 EPEARYYLRQIVLGCQYLHRNRVIHRD------------LKLGNLFLNEDLEVKIGD 182
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
L R+ + E+ +SL+H ++V + D +++ LE + L + L+
Sbjct: 54 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 113
Query: 68 EETCKCIVYQIAMALQYLHSLMSVNQHKPRYIAWKVGSILAGGKLYFIENRQVRSGN 124
E + + QI + QYLH +++ L G L+ E+ +V+ G+
Sbjct: 114 EPEARYYLRQIVLGCQYLHRNRVIHRD------------LKLGNLFLNEDLEVKIGD 158
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
L R+ + E+ +SL+H ++V + D +++ LE + L + L+
Sbjct: 80 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 139
Query: 68 EETCKCIVYQIAMALQYLHSLMSVNQHKPRYIAWKVGSILAGGKLYFIENRQVRSGN 124
E + + QI + QYLH +++ L G L+ E+ +V+ G+
Sbjct: 140 EPEARYYLRQIVLGCQYLHRNRVIHRD------------LKLGNLFLNEDLEVKIGD 184
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 5 QNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV 64
+NA E R + E + LK ++HP+++ LY + + + +EY + G L+ +
Sbjct: 63 ENASPSELRDLLS-EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESR 121
Query: 65 KLS 67
K+
Sbjct: 122 KVG 124
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 31 IVTLYESV-LWKDNIYMFLEYVQGGDLKSKIE--ACVKLSEETCKCIVYQIAMALQYLHS 87
IV +YE++ + + + +E + GG+L S+I+ +E I+ I A+QYLHS
Sbjct: 82 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 141
Query: 88 L 88
+
Sbjct: 142 I 142
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 5 QNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV 64
+NA E R + E + LK ++HP+++ LY + + + +EY + G L+ +
Sbjct: 63 ENASPSELRDLLS-EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESR 121
Query: 65 KLS 67
K+
Sbjct: 122 KVG 124
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
L R+ + E+ +SL+H ++V + D +++ LE + L + L+
Sbjct: 60 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 119
Query: 68 EETCKCIVYQIAMALQYLHSLMSVNQHKPRYIAWKVGSILAGGKLYFIENRQVRSGN 124
E + + QI + QYLH +++ L G L+ E+ +V+ G+
Sbjct: 120 EPEARYYLRQIVLGCQYLHRNRVIHRD------------LKLGNLFLNEDLEVKIGD 164
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Query: 5 QNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV 64
+NA E R + E + LK ++HP+++ LY + + + +EY + G L+ +
Sbjct: 63 ENASPSELRDLLS-EFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESR 121
Query: 65 KLS 67
K+
Sbjct: 122 KVG 124
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 31 IVTLYESV-LWKDNIYMFLEYVQGGDLKSKIE--ACVKLSEETCKCIVYQIAMALQYLHS 87
IV +YE++ + + + +E + GG+L S+I+ +E I+ I A+QYLHS
Sbjct: 81 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 140
Query: 88 L 88
+
Sbjct: 141 I 141
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 33/79 (41%)
Query: 9 DKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE 68
DK +K E+ LK L H N+V L E K Y+ E+V L L
Sbjct: 64 DKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDY 123
Query: 69 ETCKCIVYQIAMALQYLHS 87
+ + ++QI + + HS
Sbjct: 124 QVVQKYLFQIINGIGFCHS 142
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 31 IVTLYESV-LWKDNIYMFLEYVQGGDLKSKIE--ACVKLSEETCKCIVYQIAMALQYLHS 87
IV +YE++ + + + +E + GG+L S+I+ +E I+ I A+QYLHS
Sbjct: 74 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 133
Query: 88 L 88
+
Sbjct: 134 I 134
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
L R+ + E+ +SL+H ++V + D +++ LE + L + L+
Sbjct: 56 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 115
Query: 68 EETCKCIVYQIAMALQYLHSLMSVNQHKPRYIAWKVGSILAGGKLYFIENRQVRSGN 124
E + + QI + QYLH +++ L G L+ E+ +V+ G+
Sbjct: 116 EPEARYYLRQIVLGCQYLHRNRVIHRD------------LKLGNLFLNEDLEVKIGD 160
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 31 IVTLYESV-LWKDNIYMFLEYVQGGDLKSKIE--ACVKLSEETCKCIVYQIAMALQYLHS 87
IV +YE++ + + + +E + GG+L S+I+ +E I+ I A+QYLHS
Sbjct: 80 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 139
Query: 88 L 88
+
Sbjct: 140 I 140
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 31 IVTLYESV-LWKDNIYMFLEYVQGGDLKSKIE--ACVKLSEETCKCIVYQIAMALQYLHS 87
IV +YE++ + + + +E + GG+L S+I+ +E I+ I A+QYLHS
Sbjct: 75 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 134
Query: 88 L 88
+
Sbjct: 135 I 135
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/117 (21%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
L R+ + E+ +SL+H ++V + D +++ LE + L + L+
Sbjct: 56 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 115
Query: 68 EETCKCIVYQIAMALQYLHSLMSVNQHKPRYIAWKVGSILAGGKLYFIENRQVRSGN 124
E + + QI + QYLH +++ L G L+ E+ +V+ G+
Sbjct: 116 EPEARYYLRQIVLGCQYLHRNRVIHRD------------LKLGNLFLNEDLEVKIGD 160
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 31 IVTLYESV-LWKDNIYMFLEYVQGGDLKSKIE--ACVKLSEETCKCIVYQIAMALQYLHS 87
IV +YE++ + + + +E + GG+L S+I+ +E I+ I A+QYLHS
Sbjct: 76 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 135
Query: 88 L 88
+
Sbjct: 136 I 136
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 31 IVTLYESV-LWKDNIYMFLEYVQGGDLKSKIE--ACVKLSEETCKCIVYQIAMALQYLHS 87
IV +YE++ + + + +E + GG+L S+I+ +E I+ I A+QYLHS
Sbjct: 74 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 133
Query: 88 L 88
+
Sbjct: 134 I 134
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD-NIYMFLEYVQGGDLKSK 59
+K + D F E +K SHPN+++L L + + + L Y++ GDL++
Sbjct: 55 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 114
Query: 60 IEACVKLSEETCKCIV---YQIAMALQYLHS 87
I + T K ++ Q+A ++YL S
Sbjct: 115 IRN--ETHNPTVKDLIGFGLQVAKGMKYLAS 143
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD-NIYMFLEYVQGGDLKSK 59
+K + D F E +K SHPN+++L L + + + L Y++ GDL++
Sbjct: 82 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 141
Query: 60 IEACVKLSEETCKCIV---YQIAMALQYLHS 87
I + T K ++ Q+A ++YL S
Sbjct: 142 IRN--ETHNPTVKDLIGFGLQVAKGMKYLAS 170
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD-NIYMFLEYVQGGDLKSK 59
+K + D F E +K SHPN+++L L + + + L Y++ GDL++
Sbjct: 62 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 121
Query: 60 IEACVKLSEETCKCIV---YQIAMALQYLHS 87
I + T K ++ Q+A ++YL S
Sbjct: 122 IRN--ETHNPTVKDLIGFGLQVAKGMKYLAS 150
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD-NIYMFLEYVQGGDLKSK 59
+K + D F E +K SHPN+++L L + + + L Y++ GDL++
Sbjct: 81 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 140
Query: 60 IEACVKLSEETCKCIV---YQIAMALQYLHS 87
I + T K ++ Q+A ++YL S
Sbjct: 141 IRN--ETHNPTVKDLIGFGLQVAKGMKYLAS 169
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 17/89 (19%)
Query: 16 FANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-----------C 63
+E++ +K + H NI+TL + +Y+ +EY G+L+ + A
Sbjct: 87 LVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 146
Query: 64 VKLSEE--TCKCIV---YQIAMALQYLHS 87
++ EE T K +V YQ+A ++YL S
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD-NIYMFLEYVQGGDLKSK 59
+K + D F E +K SHPN+++L L + + + L Y++ GDL++
Sbjct: 61 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 120
Query: 60 IEACVKLSEETCKCIV---YQIAMALQYLHS 87
I + T K ++ Q+A ++YL S
Sbjct: 121 IRN--ETHNPTVKDLIGFGLQVAKGMKYLAS 149
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD-NIYMFLEYVQGGDLKSK 59
+K + D F E +K SHPN+++L L + + + L Y++ GDL++
Sbjct: 62 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 121
Query: 60 IEACVKLSEETCKCIV---YQIAMALQYLHS 87
I + T K ++ Q+A ++YL S
Sbjct: 122 IRN--ETHNPTVKDLIGFGLQVAKGMKYLAS 150
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD-NIYMFLEYVQGGDLKSK 59
+K + D F E +K SHPN+++L L + + + L Y++ GDL++
Sbjct: 60 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 119
Query: 60 IEACVKLSEETCKCIV---YQIAMALQYLHS 87
I + T K ++ Q+A ++YL S
Sbjct: 120 IRN--ETHNPTVKDLIGFGLQVAKGMKYLAS 148
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 27 SHPNIVTLYESVLWKDNIYMFLEY-VQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYL 85
HP ++ L + ++ + LE + DL I L E +C Q+ A+Q+
Sbjct: 96 GHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHC 155
Query: 86 HSLMSVNQ 93
HS V++
Sbjct: 156 HSRGVVHR 163
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD-NIYMFLEYVQGGDLKSK 59
+K + D F E +K SHPN+++L L + + + L Y++ GDL++
Sbjct: 63 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 122
Query: 60 IEACVKLSEETCKCIV---YQIAMALQYLHS 87
I + T K ++ Q+A ++YL S
Sbjct: 123 IRN--ETHNPTVKDLIGFGLQVAKGMKYLAS 151
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 19/41 (46%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDL 56
F E + LSHP +V Y + IY+ EY+ G L
Sbjct: 50 FFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCL 90
>pdb|3GIG|A Chain A, Crystal Structure Of Phosphorylated Deskc In Complex With
Amp-Pcp
Length = 218
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 16 FANEVDNLKS-LSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE-ETCKC 73
+E+ N+K L +I+ +YE W +NI + E + LK + VK S+ +TC+
Sbjct: 94 LKDELINIKQILEAADIMFIYEEEKWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRV 153
Query: 74 IVYQI 78
+ Q+
Sbjct: 154 DIQQL 158
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD-NIYMFLEYVQGGDLKSK 59
+K + D F E +K SHPN+++L L + + + L Y++ GDL++
Sbjct: 58 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 117
Query: 60 IEACVKLSEETCKCIV---YQIAMALQYLHS 87
I + T K ++ Q+A ++YL S
Sbjct: 118 IRN--ETHNPTVKDLIGFGLQVAKGMKYLAS 146
>pdb|3GIG|B Chain B, Crystal Structure Of Phosphorylated Deskc In Complex With
Amp-Pcp
Length = 218
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 16 FANEVDNLKS-LSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE-ETCKC 73
+E+ N+K L +I+ +YE W +NI + E + LK + VK S+ +TC+
Sbjct: 94 LKDELINIKQILEAADIMFIYEEEKWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRV 153
Query: 74 IVYQI 78
+ Q+
Sbjct: 154 DIQQL 158
>pdb|3GIE|A Chain A, Crystal Structure Of Deskc_h188e In Complex With Amp-Pcp
pdb|3GIE|B Chain B, Crystal Structure Of Deskc_h188e In Complex With Amp-Pcp
pdb|3GIF|A Chain A, Crystal Structure Of Deskc_h188e In Complex With Adp
pdb|3GIF|B Chain B, Crystal Structure Of Deskc_h188e In Complex With Adp
Length = 218
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 16 FANEVDNLKS-LSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE-ETCKC 73
+E+ N+K L +I+ +YE W +NI + E + LK + VK S+ +TC+
Sbjct: 94 LKDELINIKQILEAADIMFIYEEEKWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRV 153
Query: 74 IVYQI 78
+ Q+
Sbjct: 154 DIQQL 158
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD-NIYMFLEYVQGGDLKSK 59
+K + D F E +K SHPN+++L L + + + L Y++ GDL++
Sbjct: 63 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 122
Query: 60 IEACVKLSEETCKCIV---YQIAMALQYLHS 87
I + T K ++ Q+A ++YL S
Sbjct: 123 IRN--ETHNPTVKDLIGFGLQVAKGMKYLAS 151
>pdb|3EHF|A Chain A, Crystal Structure Of Deskc In Complex With Amp-Pcp
pdb|3EHF|B Chain B, Crystal Structure Of Deskc In Complex With Amp-Pcp
pdb|3EHF|C Chain C, Crystal Structure Of Deskc In Complex With Amp-Pcp
pdb|3EHF|D Chain D, Crystal Structure Of Deskc In Complex With Amp-Pcp
Length = 197
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 16 FANEVDNLKS-LSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE-ETCKC 73
+E+ N+K L +I +YE W +NI + E + LK + VK S+ +TC+
Sbjct: 73 LKDELINIKQILEAADIXFIYEEEKWPENISLLNENILSXCLKEAVTNVVKHSQAKTCRV 132
Query: 74 IVYQI 78
+ Q+
Sbjct: 133 DIQQL 137
>pdb|3EHH|A Chain A, Crystal Structure Of Deskc-H188v In Complex With Adp
pdb|3EHH|B Chain B, Crystal Structure Of Deskc-H188v In Complex With Adp
pdb|3EHJ|A Chain A, Crystal Structure Of Deskc-H188v In Complex With Amp-Pcp
pdb|3EHJ|B Chain B, Crystal Structure Of Deskc-H188v In Complex With Amp-Pcp
Length = 218
Score = 27.7 bits (60), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 16 FANEVDNLKS-LSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE-ETCKC 73
+E+ N+K L +I +YE W +NI + E + LK + VK S+ +TC+
Sbjct: 94 LKDELINIKQILEAADIXFIYEEEKWPENISLLNENILSXCLKEAVTNVVKHSQAKTCRV 153
Query: 74 IVYQI 78
+ Q+
Sbjct: 154 DIQQL 158
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 16/76 (21%)
Query: 28 HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA--------CV--------KLSEETC 71
H NI+ L + +Y+ +EY G+L+ ++A C +LS +
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 72 KCIVYQIAMALQYLHS 87
YQ+A ++YL S
Sbjct: 138 VSCAYQVARGMEYLAS 153
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Query: 13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
R E+ L + P IV Y + I + +E++ GG L ++ ++ E+
Sbjct: 67 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 126
Query: 73 CIVYQIAMALQYL---HSLM 89
+ + L YL H +M
Sbjct: 127 KVSIAVIKGLTYLREKHKIM 146
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Query: 13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
R E+ L + P IV Y + I + +E++ GG L ++ ++ E+
Sbjct: 51 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 110
Query: 73 CIVYQIAMALQYL---HSLM 89
+ + L YL H +M
Sbjct: 111 KVSIAVIKGLTYLREKHKIM 130
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 16/76 (21%)
Query: 28 HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA--------CV--------KLSEETC 71
H NI+ L + +Y+ +EY G+L+ ++A C +LS +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 72 KCIVYQIAMALQYLHS 87
YQ+A ++YL S
Sbjct: 153 VSCAYQVARGMEYLAS 168
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/94 (20%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
+K ++ ++ R+ F E + HPNI+ L V + + E ++ G L S +
Sbjct: 78 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL 137
Query: 61 EA-CVKLSEETCKCIVYQIAMALQYLHSLMSVNQ 93
+ + ++ IA ++YL + +V++
Sbjct: 138 RKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHR 171
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Query: 13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
R E+ L + P IV Y + I + +E++ GG L ++ ++ E+
Sbjct: 48 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 107
Query: 73 CIVYQIAMALQYL---HSLM 89
+ + L YL H +M
Sbjct: 108 KVSIAVIKGLTYLREKHKIM 127
>pdb|3EHG|A Chain A, Crystal Structure Of The Atp-Binding Domain Of Desk In
Complex With Atp
Length = 128
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 16 FANEVDNLKS-LSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSE-ETCKC 73
+E+ N+K L +I+ +YE W +NI + E + LK + VK S+ +TC+
Sbjct: 4 LKDELINIKQILEAADIMFIYEEEKWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRV 63
Query: 74 IVYQI 78
+ Q+
Sbjct: 64 DIQQL 68
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDL 56
R+ F E + L L H +IV + + M EY++ GDL
Sbjct: 58 RQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL 101
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDL 56
R+ F E + L L H +IV + + M EY++ GDL
Sbjct: 64 RQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL 107
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDL 56
R+ F E + L L H +IV + + M EY++ GDL
Sbjct: 87 RQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL 130
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 27.3 bits (59), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Query: 13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
R E+ L + P IV Y + I + +E++ GG L ++ ++ E+
Sbjct: 75 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 134
Query: 73 CIVYQIAMALQYL---HSLM 89
+ + L YL H +M
Sbjct: 135 KVSIAVIKGLTYLREKHKIM 154
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Query: 13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
R E+ L + P IV Y + I + +E++ GG L ++ ++ E+
Sbjct: 48 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 107
Query: 73 CIVYQIAMALQYL---HSLM 89
+ + L YL H +M
Sbjct: 108 KVSIAVIKGLTYLREKHKIM 127
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Query: 13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
R E+ L + P IV Y + I + +E++ GG L ++ ++ E+
Sbjct: 110 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 169
Query: 73 CIVYQIAMALQYL---HSLM 89
+ + L YL H +M
Sbjct: 170 KVSIAVIKGLTYLREKHKIM 189
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 27.3 bits (59), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Query: 13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
R E+ L + P IV Y + I + +E++ GG L ++ ++ E+
Sbjct: 48 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 107
Query: 73 CIVYQIAMALQYL---HSLM 89
+ + L YL H +M
Sbjct: 108 KVSIAVIKGLTYLREKHKIM 127
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 27.3 bits (59), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Query: 13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
R E+ L + P IV Y + I + +E++ GG L ++ ++ E+
Sbjct: 48 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 107
Query: 73 CIVYQIAMALQYL---HSLM 89
+ + L YL H +M
Sbjct: 108 KVSIAVIKGLTYLREKHKIM 127
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 27.3 bits (59), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Query: 13 RKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCK 72
R E+ L + P IV Y + I + +E++ GG L ++ ++ E+
Sbjct: 48 RNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG 107
Query: 73 CIVYQIAMALQYL---HSLM 89
+ + L YL H +M
Sbjct: 108 KVSIAVIKGLTYLREKHKIM 127
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 27.3 bits (59), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K ++ ++ R+ F E + HPNI+ L V + + E ++ G L S
Sbjct: 49 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 106
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 27.3 bits (59), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/89 (23%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNI-YMFLEYVQGGDLKSK 59
+K + + + + F E ++ L+HPN++ L +L + + ++ L Y+ GDL
Sbjct: 54 IKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQF 113
Query: 60 IEACVKLSEETCKCIV---YQIAMALQYL 85
I + + T K ++ Q+A ++YL
Sbjct: 114 IRSPQR--NPTVKDLISFGLQVARGMEYL 140
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/58 (22%), Positives = 28/58 (48%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K ++ ++ R+ F E + HPN+V L V + + +E+++ G L +
Sbjct: 76 IKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDA 133
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 17/104 (16%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSK 59
+K +++ +E+ +E++ +K + H NI+ L + +Y+ +EY G+L+
Sbjct: 72 VKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREY 131
Query: 60 IEA-----------CVKLSEE--TCKCIV---YQIAMALQYLHS 87
+ A ++ EE T K +V YQ+A ++YL S
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 9 DKENRKYFANEVDNLKSLSHPNIVTLYESVL----WKDNIYMFLEYVQGGDLKSKIEACV 64
++++R+ E D + +HPNI+ L L K ++ L + + G L ++IE
Sbjct: 66 EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLK 125
Query: 65 K----LSEETCKCIVYQIAMALQYLHS 87
L+E+ ++ I L+ +H+
Sbjct: 126 DKGNFLTEDQILWLLLGICRGLEAIHA 152
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 11 ENRKYFANEVDNLKSLSHPNIVTL----YESVLWKDNIYM--FLEYVQGGDLKSKIEACV 64
+++++ E+ ++ + HPN+V L Y + KD +++ LEYV ++
Sbjct: 74 QDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRAS-RHYA 132
Query: 65 KLSEET----CKCIVYQIAMALQYLHSL 88
KL + K +YQ+ +L Y+HS+
Sbjct: 133 KLKQTMPMLLIKLYMYQLLRSLAYIHSI 160
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K ++ ++ R+ F E + HPNI+ L V + + E ++ G L S
Sbjct: 78 IKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDS 135
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD-NIYMFLEYVQGGDLKSK 59
+K + D F E +K SHPN+++L L + + + L Y++ GDL++
Sbjct: 122 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 181
Query: 60 IEACVKLSEETCKCIV---YQIAMALQYLHS 87
I + T K ++ Q+A +++L S
Sbjct: 182 IRN--ETHNPTVKDLIGFGLQVAKGMKFLAS 210
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 26.9 bits (58), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD-NIYMFLEYVQGGDLKSK 59
+K + D F E +K SHPN+++L L + + + L Y++ GDL++
Sbjct: 63 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 122
Query: 60 IEACVKLSEETCKCIV---YQIAMALQYLHS 87
I + T K ++ Q+A +++L S
Sbjct: 123 IRN--ETHNPTVKDLIGFGLQVAKGMKFLAS 151
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 16/76 (21%)
Query: 28 HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------KLSEETC 71
H NI+ L + +Y+ +EY G+L+ ++A +LS +
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 72 KCIVYQIAMALQYLHS 87
YQ+A ++YL S
Sbjct: 194 VSCAYQVARGMEYLAS 209
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 2/62 (3%)
Query: 27 SHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI--EACVKLSEETCKCIVYQIAMALQY 84
S P ++ L+E I + LEY GG++ S E +SE ++ QI + Y
Sbjct: 87 SCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYY 146
Query: 85 LH 86
LH
Sbjct: 147 LH 148
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 16/76 (21%)
Query: 28 HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------KLSEETC 71
H NI+ L + +Y+ +EY G+L+ ++A +LS +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 72 KCIVYQIAMALQYLHS 87
YQ+A ++YL S
Sbjct: 153 VSCAYQVARGMEYLAS 168
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD-NIYMFLEYVQGGDLKSK 59
+K + D F E +K SHPN+++L L + + + L Y++ GDL++
Sbjct: 68 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 127
Query: 60 IEACVKLSEETCKCIV---YQIAMALQYLHS 87
I + T K ++ Q+A +++L S
Sbjct: 128 IRN--ETHNPTVKDLIGFGLQVAKGMKFLAS 156
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 16/76 (21%)
Query: 28 HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------KLSEETC 71
H NI+ L + +Y+ +EY G+L+ ++A +LS +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 72 KCIVYQIAMALQYLHS 87
YQ+A ++YL S
Sbjct: 153 VSCAYQVARGMEYLAS 168
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 16/76 (21%)
Query: 28 HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------KLSEETC 71
H NI+ L + +Y+ +EY G+L+ ++A +LS +
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 72 KCIVYQIAMALQYLHS 87
YQ+A ++YL S
Sbjct: 145 VSCAYQVARGMEYLAS 160
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD-NIYMFLEYVQGGDLKSK 59
+K + D F E +K SHPN+++L L + + + L Y++ GDL++
Sbjct: 64 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 123
Query: 60 IEACVKLSEETCKCIV---YQIAMALQYLHS 87
I + T K ++ Q+A +++L S
Sbjct: 124 IRN--ETHNPTVKDLIGFGLQVAKGMKFLAS 152
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD-NIYMFLEYVQGGDLKSK 59
+K + D F E +K SHPN+++L L + + + L Y++ GDL++
Sbjct: 63 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 122
Query: 60 IEACVKLSEETCKCIV---YQIAMALQYLHS 87
I + T K ++ Q+A +++L S
Sbjct: 123 IRN--ETHNPTVKDLIGFGLQVAKGMKFLAS 151
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 16/76 (21%)
Query: 28 HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------KLSEETC 71
H NI+ L + +Y+ +EY G+L+ ++A +LS +
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 72 KCIVYQIAMALQYLHS 87
YQ+A ++YL S
Sbjct: 146 VSCAYQVARGMEYLAS 161
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 26.9 bits (58), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 16/76 (21%)
Query: 28 HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACV----------------KLSEETC 71
H NI+ L + +Y+ +EY G+L+ ++A +LS +
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 72 KCIVYQIAMALQYLHS 87
YQ+A ++YL S
Sbjct: 142 VSCAYQVARGMEYLAS 157
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 26.9 bits (58), Expect = 3.4, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 16 FANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC-VKLSEETCKCI 74
F E D L + I L+ + ++ +Y+ +EY GGDL + + ++ E +
Sbjct: 108 FREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFY 167
Query: 75 VYQIAMALQYLHSLMSVNQH-KPRYI 99
+ +I MA+ +H L V++ KP I
Sbjct: 168 LAEIVMAIDSVHRLGYVHRDIKPDNI 193
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD-NIYMFLEYVQGGDLKSK 59
+K + D F E +K SHPN+++L L + + + L Y++ GDL++
Sbjct: 64 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 123
Query: 60 IEACVKLSEETCKCIV---YQIAMALQYLHS 87
I + T K ++ Q+A +++L S
Sbjct: 124 IRN--ETHNPTVKDLIGFGLQVAKGMKFLAS 152
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 26.9 bits (58), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKD-NIYMFLEYVQGGDLKSK 59
+K + D F E +K SHPN+++L L + + + L Y++ GDL++
Sbjct: 61 VKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNF 120
Query: 60 IEACVKLSEETCKCIV---YQIAMALQYLHS 87
I + T K ++ Q+A +++L S
Sbjct: 121 IRN--ETHNPTVKDLIGFGLQVAKGMKFLAS 149
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 26.6 bits (57), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K + +++ F E + L+H NIV L ++ LE + GGDLKS
Sbjct: 80 VKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 137
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 16/76 (21%)
Query: 28 HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEAC----------------VKLSEETC 71
H NI+ L + +Y+ +EY G+L+ ++A +LS +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 72 KCIVYQIAMALQYLHS 87
YQ+A ++YL S
Sbjct: 153 VSCAYQVARGMEYLAS 168
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K + +++ F E + L+H NIV L ++ LE + GGDLKS
Sbjct: 66 VKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 123
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKI 60
+KEV+ ++ E+ +K L H NIV LY+ + ++ + + E++ DLK +
Sbjct: 35 LKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-NDLKKYM 93
Query: 61 EA 62
++
Sbjct: 94 DS 95
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
L ++ + E+ KSL +P++V + D +Y+ LE + L + ++
Sbjct: 81 LKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVT 140
Query: 68 EETCKCIVYQIAMALQYLH 86
E + + Q +QYLH
Sbjct: 141 EPEARYFMRQTIQGVQYLH 159
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
L ++ + E+ KSL +P++V + D +Y+ LE + L + ++
Sbjct: 81 LKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVT 140
Query: 68 EETCKCIVYQIAMALQYLH 86
E + + Q +QYLH
Sbjct: 141 EPEARYFMRQTIQGVQYLH 159
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 36/80 (45%)
Query: 8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
L ++ + E+ KSL +P++V + D +Y+ LE + L + ++
Sbjct: 65 LKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVT 124
Query: 68 EETCKCIVYQIAMALQYLHS 87
E + + Q +QYLH+
Sbjct: 125 EPEARYFMRQTIQGVQYLHN 144
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 26.6 bits (57), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/79 (22%), Positives = 35/79 (44%)
Query: 8 LDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLS 67
L ++ + E+ KSL +P++V + D +Y+ LE + L + ++
Sbjct: 81 LKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVT 140
Query: 68 EETCKCIVYQIAMALQYLH 86
E + + Q +QYLH
Sbjct: 141 EPEARYFMRQTIQGVQYLH 159
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 26.6 bits (57), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 29 PNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL 88
P IV + + D + L+ + GGDL + SE + +I + L+++H+
Sbjct: 251 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR 310
Query: 89 MSV 91
V
Sbjct: 311 FVV 313
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 26.6 bits (57), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 29 PNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL 88
P IV + + D + L+ + GGDL + SE + +I + L+++H+
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR 311
Query: 89 MSV 91
V
Sbjct: 312 FVV 314
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 26.2 bits (56), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 19 EVDNLKSLSHPNIVTLY-----ESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKC 73
E+ LK H NI+T++ +S + +Y+ E +Q DL I + LS++ +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVISTQM-LSDDHIQY 116
Query: 74 IVYQIAMALQYLH 86
+YQ A++ LH
Sbjct: 117 FIYQTLRAVKVLH 129
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 19 EVDNLKSLSHPNIVTLY-----ESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKC 73
E+ LK H NI+T++ +S + +Y+ E +Q DL I + LS++ +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVISTQM-LSDDHIQY 116
Query: 74 IVYQIAMALQYLH 86
+YQ A++ LH
Sbjct: 117 FIYQTLRAVKVLH 129
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 19 EVDNLKSLSHPNIVTLY-----ESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKC 73
E+ LK H NI+T++ +S + +Y+ E +Q DL I + LS++ +
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQ-TDLHRVISTQM-LSDDHIQY 116
Query: 74 IVYQIAMALQYLH 86
+YQ A++ LH
Sbjct: 117 FIYQTLRAVKVLH 129
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 29 PNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL 88
P IV + + D + L+ + GGDL + SE + +I + L+++H+
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR 311
Query: 89 MSV 91
V
Sbjct: 312 FVV 314
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 15/63 (23%), Positives = 28/63 (44%)
Query: 29 PNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVKLSEETCKCIVYQIAMALQYLHSL 88
P IV + + D + L+ + GGDL + SE + +I + L+++H+
Sbjct: 252 PFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR 311
Query: 89 MSV 91
V
Sbjct: 312 FVV 314
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 25.8 bits (55), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK-LSEETCKCIVYQ 77
EV L+ L HPN + L + ++ +EY G +E K L E + +
Sbjct: 104 EVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGS-ASDLLEVHKKPLQEVEIAAVTHG 162
Query: 78 IAMALQYLHS 87
L YLHS
Sbjct: 163 ALQGLAYLHS 172
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 25.8 bits (55), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Query: 19 EVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEACVK-LSEETCKCIVYQ 77
EV L+ L HPN + L + ++ +EY G +E K L E + +
Sbjct: 65 EVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGS-ASDLLEVHKKPLQEVEIAAVTHG 123
Query: 78 IAMALQYLHS 87
L YLHS
Sbjct: 124 ALQGLAYLHS 133
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 25.8 bits (55), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 17/89 (19%)
Query: 16 FANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-----------C 63
+E++ +K + H NI+ L + +Y+ +EY G+L+ + A
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 146
Query: 64 VKLSEE--TCKCIV---YQIAMALQYLHS 87
++ EE T K +V YQ+A ++YL S
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 25.8 bits (55), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 17/89 (19%)
Query: 16 FANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-----------C 63
+E++ +K + H NI+ L + +Y+ +EY G+L+ + A
Sbjct: 133 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 192
Query: 64 VKLSEE--TCKCIV---YQIAMALQYLHS 87
++ EE T K +V YQ+A ++YL S
Sbjct: 193 NRVPEEQMTFKDLVSCTYQLARGMEYLAS 221
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 25.8 bits (55), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 17/89 (19%)
Query: 16 FANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-----------C 63
+E++ +K + H NI+ L + +Y+ +EY G+L+ + A
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 146
Query: 64 VKLSEE--TCKCIV---YQIAMALQYLHS 87
++ EE T K +V YQ+A ++YL S
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 17/89 (19%)
Query: 16 FANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-----------C 63
+E++ +K + H NI+ L + +Y+ +EY G+L+ + A
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDI 146
Query: 64 VKLSEE--TCKCIV---YQIAMALQYLHS 87
++ EE T K +V YQ+A ++YL S
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 25.8 bits (55), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 17/89 (19%)
Query: 16 FANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-----------C 63
+E++ +K + H NI+ L + +Y+ +EY G+L+ + A
Sbjct: 87 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 146
Query: 64 VKLSEE--TCKCIV---YQIAMALQYLHS 87
++ EE T K +V YQ+A ++YL S
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLAS 175
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 25.8 bits (55), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 17/89 (19%)
Query: 16 FANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-----------C 63
+E++ +K + H NI+ L + +Y+ +EY G+L+ + A
Sbjct: 76 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 135
Query: 64 VKLSEE--TCKCIV---YQIAMALQYLHS 87
++ EE T K +V YQ+A ++YL S
Sbjct: 136 NRVPEEQMTFKDLVSCTYQLARGMEYLAS 164
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 25.4 bits (54), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 17/89 (19%)
Query: 16 FANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-----------C 63
+E++ +K + H NI+ L + +Y+ +EY G+L+ + A
Sbjct: 74 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 133
Query: 64 VKLSEE--TCKCIV---YQIAMALQYLHS 87
++ EE T K +V YQ+A ++YL S
Sbjct: 134 NRVPEEQMTFKDLVSCTYQLARGMEYLAS 162
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 25.4 bits (54), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 17/89 (19%)
Query: 16 FANEVDNLKSLS-HPNIVTLYESVLWKDNIYMFLEYVQGGDLKSKIEA-----------C 63
+E++ +K + H NI+ L + +Y+ +EY G+L+ + A
Sbjct: 79 LVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDI 138
Query: 64 VKLSEE--TCKCIV---YQIAMALQYLHS 87
++ EE T K +V YQ+A ++YL S
Sbjct: 139 NRVPEEQMTFKDLVSCTYQLARGMEYLAS 167
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 25.4 bits (54), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K + +++ F E + +H NIV L ++ LE + GGDLKS
Sbjct: 57 VKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 114
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 25.4 bits (54), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K + +++ F E + +H NIV L ++ LE + GGDLKS
Sbjct: 65 VKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 122
>pdb|4GRI|A Chain A, Crystal Structure Of A Glutamyl-Trna Synthetase Glurs From
Borrelia Burgdorferi Bound To Glutamic Acid And Zinc
pdb|4GRI|B Chain B, Crystal Structure Of A Glutamyl-Trna Synthetase Glurs From
Borrelia Burgdorferi Bound To Glutamic Acid And Zinc
Length = 512
Score = 25.4 bits (54), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 27 SHPNIVTLYESVLWKDNIYMFLEYVQGGD 55
S P V LY++ WK IY L V G D
Sbjct: 242 SGPLHVLLYKAFKWKPPIYCHLPMVMGND 270
>pdb|3STH|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
pdb|3STH|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
pdb|3STH|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
pdb|3STH|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase From Toxoplasma Gondii
Length = 361
Score = 25.4 bits (54), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 80 MALQYLHSLM---SVNQHKPRYIAWKVGSILAGGKLYFIENRQ 119
M+L Y+ L+ SV+ H P ++ K G ++ GGK + N +
Sbjct: 58 MSLDYMVYLLRYDSVHGHYPGEVSHKDGKLIVGGKAVTVFNEK 100
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 25.4 bits (54), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K + +++ F E + +H NIV L ++ LE + GGDLKS
Sbjct: 82 VKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 139
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 25.4 bits (54), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K + +++ F E + +H NIV L ++ LE + GGDLKS
Sbjct: 83 VKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 140
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 25.4 bits (54), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 26/58 (44%)
Query: 1 MKEVQNALDKENRKYFANEVDNLKSLSHPNIVTLYESVLWKDNIYMFLEYVQGGDLKS 58
+K + +++ F E + +H NIV L ++ LE + GGDLKS
Sbjct: 106 VKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS 163
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,842,221
Number of Sequences: 62578
Number of extensions: 136224
Number of successful extensions: 1069
Number of sequences better than 100.0: 740
Number of HSP's better than 100.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 166
Number of HSP's that attempted gapping in prelim test: 474
Number of HSP's gapped (non-prelim): 740
length of query: 131
length of database: 14,973,337
effective HSP length: 88
effective length of query: 43
effective length of database: 9,466,473
effective search space: 407058339
effective search space used: 407058339
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 46 (22.3 bits)