Your job contains 1 sequence.
>psy2931
MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDFR
KELEEREREKDKTARIRAPESHANRKQKKGKKKRG
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy2931
(95 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0040235 - symbol:c12.1 "c12.1" species:7227 "Droso... 272 1.1e-23 1
ZFIN|ZDB-GENE-040625-10 - symbol:zgc:86607 "zgc:86607" sp... 245 8.0e-21 1
UNIPROTKB|Q6DKE6 - symbol:cwc15-b "Protein CWC15 homolog ... 239 3.5e-20 1
UNIPROTKB|Q0VFP5 - symbol:cwc15 "Protein CWC15 homolog" s... 238 4.4e-20 1
UNIPROTKB|Q6NUB2 - symbol:cwc15-a "Protein CWC15 homolog ... 237 5.7e-20 1
UNIPROTKB|E1C8V6 - symbol:CWC15 "Uncharacterized protein"... 234 1.2e-19 1
UNIPROTKB|Q2KJD3 - symbol:CWC15 "Spliceosome-associated p... 234 1.2e-19 1
UNIPROTKB|E2RQA3 - symbol:CWC15 "Uncharacterized protein"... 234 1.2e-19 1
UNIPROTKB|Q9P013 - symbol:CWC15 "Spliceosome-associated p... 234 1.2e-19 1
UNIPROTKB|F1STJ3 - symbol:LOC100525240 "Uncharacterized p... 234 1.2e-19 1
UNIPROTKB|Q5RE65 - symbol:CWC15 "Spliceosome-associated p... 234 1.2e-19 1
MGI|MGI:1913320 - symbol:Cwc15 "CWC15 homolog (S. cerevis... 234 1.2e-19 1
RGD|1310669 - symbol:Cwc15 "CWC15 spliceosome-associated ... 234 1.2e-19 1
UNIPROTKB|J9PAH1 - symbol:J9PAH1 "Uncharacterized protein... 210 4.1e-17 1
RGD|1589753 - symbol:LOC310177 "similar to RIKEN cDNA 061... 206 1.1e-16 1
WB|WBGene00011687 - symbol:T10C6.5 species:6239 "Caenorha... 206 1.1e-16 1
UNIPROTKB|O45766 - symbol:T10C6.5 "Protein CWC15 homolog"... 206 1.1e-16 1
UNIPROTKB|E1BHX6 - symbol:E1BHX6 "Uncharacterized protein... 180 6.2e-14 1
TAIR|locus:2089989 - symbol:EMB2769 "EMBRYO DEFECTIVE 276... 146 2.5e-10 1
POMBASE|SPBC337.06c - symbol:cwf15 "complexed with Cdc5 p... 132 2.0e-08 1
ASPGD|ASPL0000008612 - symbol:AN6110 species:162425 "Emer... 112 2.4e-06 1
UNIPROTKB|Q5B020 - symbol:cwc15 "Pre-mRNA-splicing factor... 112 2.4e-06 1
UNIPROTKB|G4MV62 - symbol:MGG_08861 "Uncharacterized prot... 110 4.9e-06 1
UNIPROTKB|Q6C0E6 - symbol:CWC15 "Pre-mRNA-splicing factor... 104 1.6e-05 1
GENEDB_PFALCIPARUM|PF07_0091 - symbol:PF07_0091 "cell cyc... 95 0.00031 1
UNIPROTKB|Q8IBM8 - symbol:PF07_0091 "Cell cycle control p... 95 0.00031 1
>FB|FBgn0040235 [details] [associations]
symbol:c12.1 "c12.1" species:7227 "Drosophila melanogaster"
[GO:0003674 "molecular_function" evidence=ND] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IEA;IC] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] InterPro:IPR006973 Pfam:PF04889 GO:GO:0007052
EMBL:AE014298 GO:GO:0003723 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 KO:K12863 PANTHER:PTHR12718 eggNOG:NOG326120
GeneTree:ENSGT00390000012084 OMA:VFKNCAR EMBL:AF217651
EMBL:AY069693 RefSeq:NP_652605.1 UniGene:Dm.1999 IntAct:Q9V3B6
MINT:MINT-940292 PaxDb:Q9V3B6 PRIDE:Q9V3B6
EnsemblMetazoa:FBtr0071324 GeneID:53435 KEGG:dme:Dmel_CG12135
UCSC:CG12135-RA CTD:53435 FlyBase:FBgn0040235 InParanoid:Q9V3B6
OrthoDB:EOG473N7D PhylomeDB:Q9V3B6 ChiTaRS:c12.1 GenomeRNAi:53435
NextBio:841144 Bgee:Q9V3B6 Uniprot:Q9V3B6
Length = 259
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 51/59 (86%), Positives = 56/59 (94%)
Query: 1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
MTTAARPTF+PARGG GRGEKDLSA+SKQYSSRDLPGHTKLKYRE GQGT++E R+RDF
Sbjct: 1 MTTAARPTFDPARGGSGRGEKDLSALSKQYSSRDLPGHTKLKYRETGQGTSDENRNRDF 59
>ZFIN|ZDB-GENE-040625-10 [details] [associations]
symbol:zgc:86607 "zgc:86607" species:7955 "Danio
rerio" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA;ISS] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] InterPro:IPR006973 Pfam:PF04889
ZFIN:ZDB-GENE-040625-10 GO:GO:0005681 GO:GO:0000398
HOVERGEN:HBG107412 PANTHER:PTHR12718 GeneTree:ENSGT00390000012084
HOGENOM:HOG000214250 OMA:VFKNCAR EMBL:CR926467 IPI:IPI00487486
UniGene:Dr.80211 Ensembl:ENSDART00000027217 Uniprot:A5WV15
Length = 244
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 46/59 (77%), Positives = 53/59 (89%)
Query: 1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
MTTAARPTFEPARGG+G+GE DLSA+SKQYSSRDLPGHTK+KYR+ Q EE+R+RDF
Sbjct: 1 MTTAARPTFEPARGGRGKGEGDLSALSKQYSSRDLPGHTKIKYRQPTQDAPEEVRARDF 59
>UNIPROTKB|Q6DKE6 [details] [associations]
symbol:cwc15-b "Protein CWC15 homolog B" species:8355
"Xenopus laevis" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] InterPro:IPR006973 Pfam:PF04889
GO:GO:0005634 GO:GO:0005681 GO:GO:0003723 GO:GO:0000398
HOVERGEN:HBG107412 KO:K12863 PANTHER:PTHR12718 EMBL:BC074156
RefSeq:NP_001086072.1 UniGene:Xl.2419 GeneID:444501 KEGG:xla:444501
CTD:444501 Xenbase:XB-GENE-6254901 Uniprot:Q6DKE6
Length = 230
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 45/59 (76%), Positives = 51/59 (86%)
Query: 1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
MTTAARPTFEPARGG+G+GE DLS +SKQYSSRDLP HTK+KYR+ Q EE+RSRDF
Sbjct: 1 MTTAARPTFEPARGGRGKGESDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRSRDF 59
>UNIPROTKB|Q0VFP5 [details] [associations]
symbol:cwc15 "Protein CWC15 homolog" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] InterPro:IPR006973 Pfam:PF04889
GO:GO:0005634 GO:GO:0005681 GO:GO:0003723 GO:GO:0000398
HOVERGEN:HBG107412 KO:K12863 PANTHER:PTHR12718 CTD:51503
eggNOG:NOG326120 GeneTree:ENSGT00390000012084 HOGENOM:HOG000214250
OrthoDB:EOG47PX79 EMBL:BC118751 RefSeq:NP_001072201.1
UniGene:Str.36891 ProteinModelPortal:Q0VFP5 STRING:Q0VFP5
Ensembl:ENSXETT00000015404 GeneID:779647 KEGG:xtr:779647
Xenbase:XB-GENE-987018 Bgee:Q0VFP5 Uniprot:Q0VFP5
Length = 227
Score = 238 (88.8 bits), Expect = 4.4e-20, P = 4.4e-20
Identities = 45/59 (76%), Positives = 51/59 (86%)
Query: 1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
MTTAARPTFEPARGG+G+GE DLS +SKQYSSRDLP HTK+KYR+ Q EE+RSRDF
Sbjct: 1 MTTAARPTFEPARGGRGKGEADLSQLSKQYSSRDLPSHTKIKYRQATQDAPEEVRSRDF 59
>UNIPROTKB|Q6NUB2 [details] [associations]
symbol:cwc15-a "Protein CWC15 homolog A" species:8355
"Xenopus laevis" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] InterPro:IPR006973 Pfam:PF04889
GO:GO:0005634 GO:GO:0005681 GO:GO:0003723 GO:GO:0000398
EMBL:BC068684 RefSeq:NP_001084754.1 UniGene:Xl.47448 GeneID:414727
KEGG:xla:414727 CTD:414727 Xenbase:XB-GENE-987023
HOVERGEN:HBG107412 KO:K12863 PANTHER:PTHR12718 Uniprot:Q6NUB2
Length = 228
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 45/59 (76%), Positives = 51/59 (86%)
Query: 1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
MTTAARPTFEPARGG+G+GE DLS +SKQYSSRDLP HTK+KYR+ Q EE+RSRDF
Sbjct: 1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQATQDAPEEVRSRDF 59
>UNIPROTKB|E1C8V6 [details] [associations]
symbol:CWC15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR006973
Pfam:PF04889 GO:GO:0005681 GO:GO:0000398 KO:K12863
PANTHER:PTHR12718 CTD:51503 GeneTree:ENSGT00390000012084
OMA:VFKNCAR EMBL:AADN02004893 IPI:IPI00590829 RefSeq:XP_001234236.1
RefSeq:XP_417190.2 UniGene:Gga.5236 Ensembl:ENSGALT00000027813
GeneID:418996 KEGG:gga:418996 NextBio:20822113 Uniprot:E1C8V6
Length = 230
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 44/59 (74%), Positives = 51/59 (86%)
Query: 1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
MTTAARPTFEPARGG+G+GE DLS +SKQYSSRDLP HTK+KYR+ Q EE+R+RDF
Sbjct: 1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQATQDAPEEVRNRDF 59
>UNIPROTKB|Q2KJD3 [details] [associations]
symbol:CWC15 "Spliceosome-associated protein CWC15 homolog"
species:9913 "Bos taurus" [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0003723 "RNA
binding" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR006973 Pfam:PF04889 GO:GO:0005681
GO:GO:0003723 GO:GO:0000398 HOVERGEN:HBG107412 KO:K12863
PANTHER:PTHR12718 EMBL:BC105398 IPI:IPI00685781
RefSeq:NP_001039864.1 UniGene:Bt.1540 PRIDE:Q2KJD3
Ensembl:ENSBTAT00000010403 GeneID:535258 KEGG:bta:535258 CTD:51503
eggNOG:NOG326120 GeneTree:ENSGT00390000012084 HOGENOM:HOG000214250
InParanoid:Q2KJD3 OMA:VFKNCAR OrthoDB:EOG47PX79 NextBio:20876676
Uniprot:Q2KJD3
Length = 231
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 44/59 (74%), Positives = 51/59 (86%)
Query: 1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
MTTAARPTFEPARGG+G+GE DLS +SKQYSSRDLP HTK+KYR+ Q EE+R+RDF
Sbjct: 1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDF 59
>UNIPROTKB|E2RQA3 [details] [associations]
symbol:CWC15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR006973 Pfam:PF04889 GO:GO:0005681 GO:GO:0000398
PANTHER:PTHR12718 GeneTree:ENSGT00390000012084 OMA:VFKNCAR
EMBL:AAEX03012717 EMBL:AAEX03012718 Ensembl:ENSCAFT00000006620
NextBio:20852377 Uniprot:E2RQA3
Length = 231
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 44/59 (74%), Positives = 51/59 (86%)
Query: 1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
MTTAARPTFEPARGG+G+GE DLS +SKQYSSRDLP HTK+KYR+ Q EE+R+RDF
Sbjct: 1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDF 59
>UNIPROTKB|Q9P013 [details] [associations]
symbol:CWC15 "Spliceosome-associated protein CWC15 homolog"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IDA] [GO:0003723 "RNA
binding" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR006973 Pfam:PF04889 GO:GO:0003723 GO:GO:0000398
GO:GO:0071013 HOVERGEN:HBG107412 KO:K12863 PANTHER:PTHR12718
CTD:51503 eggNOG:NOG326120 HOGENOM:HOG000214250 OrthoDB:EOG47PX79
EMBL:AJ250393 EMBL:AF161497 EMBL:AF110775 EMBL:AK314900
EMBL:BC006975 EMBL:BC032629 EMBL:BC040946 IPI:IPI00009009
RefSeq:NP_057487.2 UniGene:Hs.503597 ProteinModelPortal:Q9P013
IntAct:Q9P013 STRING:Q9P013 PhosphoSite:Q9P013 DMDM:150438891
PaxDb:Q9P013 PeptideAtlas:Q9P013 PRIDE:Q9P013 DNASU:51503
GeneID:51503 KEGG:hsa:51503 UCSC:uc001pfd.4 GeneCards:GC11M094695
H-InvDB:HIX0010036 HGNC:HGNC:26939 neXtProt:NX_Q9P013
PharmGKB:PA162383026 InParanoid:Q9P013 GenomeRNAi:51503
NextBio:55183 CleanEx:HS_CWC15 Genevestigator:Q9P013 Uniprot:Q9P013
Length = 229
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 44/59 (74%), Positives = 51/59 (86%)
Query: 1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
MTTAARPTFEPARGG+G+GE DLS +SKQYSSRDLP HTK+KYR+ Q EE+R+RDF
Sbjct: 1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDF 59
>UNIPROTKB|F1STJ3 [details] [associations]
symbol:LOC100525240 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR006973 Pfam:PF04889 GO:GO:0005681 GO:GO:0000398
KO:K12863 PANTHER:PTHR12718 GeneTree:ENSGT00390000012084
OMA:VFKNCAR EMBL:CU571278 RefSeq:XP_003129801.1 UniGene:Ssc.5637
Ensembl:ENSSSCT00000016322 GeneID:100525240 KEGG:ssc:100525240
Uniprot:F1STJ3
Length = 231
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 44/59 (74%), Positives = 51/59 (86%)
Query: 1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
MTTAARPTFEPARGG+G+GE DLS +SKQYSSRDLP HTK+KYR+ Q EE+R+RDF
Sbjct: 1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDF 59
>UNIPROTKB|Q5RE65 [details] [associations]
symbol:CWC15 "Spliceosome-associated protein CWC15 homolog"
species:9601 "Pongo abelii" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003723 "RNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0005681 "spliceosomal
complex" evidence=ISS] InterPro:IPR006973 Pfam:PF04889
GO:GO:0005681 GO:GO:0003723 GO:GO:0000398 HOVERGEN:HBG107412
KO:K12863 PANTHER:PTHR12718 CTD:51503 GeneTree:ENSGT00390000012084
OMA:VFKNCAR EMBL:CR857672 RefSeq:NP_001127215.1 UniGene:Pab.12143
ProteinModelPortal:Q5RE65 PRIDE:Q5RE65 Ensembl:ENSPPYT00000004504
GeneID:100174270 KEGG:pon:100174270 InParanoid:Q5RE65
Uniprot:Q5RE65
Length = 229
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 44/59 (74%), Positives = 51/59 (86%)
Query: 1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
MTTAARPTFEPARGG+G+GE DLS +SKQYSSRDLP HTK+KYR+ Q EE+R+RDF
Sbjct: 1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDF 59
>MGI|MGI:1913320 [details] [associations]
symbol:Cwc15 "CWC15 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=ISO] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR006973 Pfam:PF04889 MGI:MGI:1913320
GO:GO:0005681 GO:GO:0003723 GO:GO:0000398 HOVERGEN:HBG107412
KO:K12863 PANTHER:PTHR12718 CTD:51503 eggNOG:NOG326120
GeneTree:ENSGT00390000012084 HOGENOM:HOG000214250 OMA:VFKNCAR
OrthoDB:EOG47PX79 EMBL:AJ250394 EMBL:AY842452 EMBL:AK002864
EMBL:AK003202 EMBL:AK003591 EMBL:AK003834 EMBL:AK145249
EMBL:AK167776 EMBL:AK168365 EMBL:BC004726 IPI:IPI00119814
RefSeq:NP_075642.1 UniGene:Mm.245938 ProteinModelPortal:Q9JHS9
STRING:Q9JHS9 PhosphoSite:Q9JHS9 PaxDb:Q9JHS9 PRIDE:Q9JHS9
Ensembl:ENSMUST00000004200 GeneID:66070 KEGG:mmu:66070
UCSC:uc009oeo.1 InParanoid:Q9JHS9 NextBio:320536 Bgee:Q9JHS9
CleanEx:MM_CWC15 Genevestigator:Q9JHS9 Uniprot:Q9JHS9
Length = 229
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 44/59 (74%), Positives = 51/59 (86%)
Query: 1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
MTTAARPTFEPARGG+G+GE DLS +SKQYSSRDLP HTK+KYR+ Q EE+R+RDF
Sbjct: 1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDF 59
>RGD|1310669 [details] [associations]
symbol:Cwc15 "CWC15 spliceosome-associated protein homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0003674
"molecular_function" evidence=ND] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005681 "spliceosomal
complex" evidence=ISO;ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR006973 Pfam:PF04889 RGD:1310669
GO:GO:0005681 GO:GO:0003723 GO:GO:0000398 HOVERGEN:HBG107412
KO:K12863 PANTHER:PTHR12718 CTD:51503 eggNOG:NOG326120
GeneTree:ENSGT00390000012084 HOGENOM:HOG000214250 OMA:VFKNCAR
OrthoDB:EOG47PX79 EMBL:BC091396 IPI:IPI00202933
RefSeq:NP_001020158.1 UniGene:Rn.4318 STRING:Q5BJP2 PRIDE:Q5BJP2
Ensembl:ENSRNOT00000011855 GeneID:300361 KEGG:rno:300361
UCSC:RGD:1310669 InParanoid:Q5BJP2 NextBio:646789
Genevestigator:Q5BJP2 Uniprot:Q5BJP2
Length = 229
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 44/59 (74%), Positives = 51/59 (86%)
Query: 1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
MTTAARPTFEPARGG+G+GE DLS +SKQYSSRDLP HTK+KYR+ Q EE+R+RDF
Sbjct: 1 MTTAARPTFEPARGGRGKGEGDLSQLSKQYSSRDLPSHTKIKYRQTTQDAPEEVRNRDF 59
>UNIPROTKB|J9PAH1 [details] [associations]
symbol:J9PAH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR006973 Pfam:PF04889 GO:GO:0005681 GO:GO:0000398
PANTHER:PTHR12718 GeneTree:ENSGT00390000012084 EMBL:AAEX03012096
Ensembl:ENSCAFT00000009616 OMA:RXEEDED Uniprot:J9PAH1
Length = 231
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 41/59 (69%), Positives = 48/59 (81%)
Query: 1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
MTTAARPTFEPARG +G+GE DLS +SKQYSSRDL HTK+KYR+ Q EE+R+ DF
Sbjct: 1 MTTAARPTFEPARGWRGKGEGDLSQLSKQYSSRDLSSHTKIKYRQTTQDAPEEVRNCDF 59
>RGD|1589753 [details] [associations]
symbol:LOC310177 "similar to RIKEN cDNA 0610040D20"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR006973 Pfam:PF04889 RGD:1589753
GO:GO:0005681 GO:GO:0000398 PANTHER:PTHR12718
GeneTree:ENSGT00390000012084 IPI:IPI00360635 RefSeq:XP_001063457.1
RefSeq:XP_226872.1 Ensembl:ENSRNOT00000030328 GeneID:310177
KEGG:rno:310177 UCSC:RGD:1589753 OMA:MENILRG OrthoDB:EOG4RV2T3
NextBio:661680 Uniprot:D3ZS22
Length = 224
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 40/59 (67%), Positives = 47/59 (79%)
Query: 1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRDF 59
MTTAARPTFEPARGG+ +GE DLS +SKQYSSRDLP H K+KY + Q EE+R+ DF
Sbjct: 1 MTTAARPTFEPARGGRRKGEGDLSQLSKQYSSRDLPSHKKIKYTQTTQDAPEEVRNCDF 59
>WB|WBGene00011687 [details] [associations]
symbol:T10C6.5 species:6239 "Caenorhabditis elegans"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR006973 Pfam:PF04889
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0005681
GO:GO:0003723 GO:GO:0000398 KO:K12863 PANTHER:PTHR12718
eggNOG:NOG326120 GeneTree:ENSGT00390000012084 HOGENOM:HOG000214250
OMA:VFKNCAR EMBL:Z93388 PIR:T24789 RefSeq:NP_507024.1
ProteinModelPortal:O45766 DIP:DIP-26099N IntAct:O45766
MINT:MINT-1088541 STRING:O45766 PaxDb:O45766
EnsemblMetazoa:T10C6.5.1 EnsemblMetazoa:T10C6.5.2 GeneID:180069
KEGG:cel:CELE_T10C6.5 UCSC:T10C6.5 CTD:180069 WormBase:T10C6.5
InParanoid:O45766 NextBio:907964 Uniprot:O45766
Length = 230
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 38/58 (65%), Positives = 45/58 (77%)
Query: 1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRD 58
MTTA RPTF PARGG RGE DLS +S QYSS+D+P HTK+KYR+ GQ T +LR +D
Sbjct: 1 MTTAHRPTFHPARGGTARGEGDLSKLSNQYSSKDMPSHTKMKYRQTGQETEADLRKKD 58
>UNIPROTKB|O45766 [details] [associations]
symbol:T10C6.5 "Protein CWC15 homolog" species:6239
"Caenorhabditis elegans" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003723 "RNA binding" evidence=ISS] InterPro:IPR006973
Pfam:PF04889 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0005681 GO:GO:0003723 GO:GO:0000398 KO:K12863
PANTHER:PTHR12718 eggNOG:NOG326120 GeneTree:ENSGT00390000012084
HOGENOM:HOG000214250 OMA:VFKNCAR EMBL:Z93388 PIR:T24789
RefSeq:NP_507024.1 ProteinModelPortal:O45766 DIP:DIP-26099N
IntAct:O45766 MINT:MINT-1088541 STRING:O45766 PaxDb:O45766
EnsemblMetazoa:T10C6.5.1 EnsemblMetazoa:T10C6.5.2 GeneID:180069
KEGG:cel:CELE_T10C6.5 UCSC:T10C6.5 CTD:180069 WormBase:T10C6.5
InParanoid:O45766 NextBio:907964 Uniprot:O45766
Length = 230
Score = 206 (77.6 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 38/58 (65%), Positives = 45/58 (77%)
Query: 1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRD 58
MTTA RPTF PARGG RGE DLS +S QYSS+D+P HTK+KYR+ GQ T +LR +D
Sbjct: 1 MTTAHRPTFHPARGGTARGEGDLSKLSNQYSSKDMPSHTKMKYRQTGQETEADLRKKD 58
>UNIPROTKB|E1BHX6 [details] [associations]
symbol:E1BHX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IEA]
InterPro:IPR006973 Pfam:PF04889 GO:GO:0005681 GO:GO:0000398
PANTHER:PTHR12718 GeneTree:ENSGT00390000012084 EMBL:DAAA02057718
IPI:IPI00713118 Ensembl:ENSBTAT00000024218 Uniprot:E1BHX6
Length = 200
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 36/57 (63%), Positives = 45/57 (78%)
Query: 1 MTTAARPTFEPAR-GGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRS 56
MTTAA+P FEPAR GG+G+GE DL+ SKQYSSR+LP HTK+KYR+ Q E+ R+
Sbjct: 1 MTTAAQPAFEPARRGGRGKGEGDLNKRSKQYSSRELPSHTKIKYRQTTQDAPEDERA 57
>TAIR|locus:2089989 [details] [associations]
symbol:EMB2769 "EMBRYO DEFECTIVE 2769" species:3702
"Arabidopsis thaliana" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR006973 Pfam:PF04889
EMBL:CP002686 GO:GO:0005681 EMBL:AP000375 GO:GO:0000398 KO:K12863
PANTHER:PTHR12718 OMA:VFKNCAR IPI:IPI00544012 RefSeq:NP_566447.1
UniGene:At.20390 PRIDE:Q9LK52 EnsemblPlants:AT3G13200.1
GeneID:820510 KEGG:ath:AT3G13200 TAIR:At3g13200 InParanoid:Q9LK52
PhylomeDB:Q9LK52 ProtClustDB:CLSN2688334 Genevestigator:Q9LK52
Uniprot:Q9LK52
Length = 230
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELR 55
MTTAARPT+ PA+GG +G + S++YSSRD+ HT LK R GQ T EEL+
Sbjct: 1 MTTAARPTWAPAKGGNEQGGARIFGPSQKYSSRDVAAHTTLKPRREGQHTQEELQ 55
>POMBASE|SPBC337.06c [details] [associations]
symbol:cwf15 "complexed with Cdc5 protein Cwf15"
species:4896 "Schizosaccharomyces pombe" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IPI] InterPro:IPR006973
Pfam:PF04889 PomBase:SPBC337.06c EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003723 GO:GO:0000398
KO:K12863 PANTHER:PTHR12718 OrthoDB:EOG476P93 eggNOG:NOG326120
HOGENOM:HOG000214250 OMA:VFKNCAR EMBL:D89143 PIR:T40259 PIR:T42419
RefSeq:NP_595407.1 IntAct:P78794 EnsemblFungi:SPBC337.06c.1
GeneID:2540983 KEGG:spo:SPBC337.06c NextBio:20802098 Uniprot:P78794
Length = 265
Score = 132 (51.5 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 31/58 (53%), Positives = 37/58 (63%)
Query: 1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRD 58
MTTA RP F+PARG E + I+ SSR LP H KLKYR+ QGT EE+R +D
Sbjct: 1 MTTAHRPQFDPARG---HSEMAPTRIT---SSRALPAHLKLKYRQESQGTEEEVRKQD 52
>ASPGD|ASPL0000008612 [details] [associations]
symbol:AN6110 species:162425 "Emericella nidulans"
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR006973 Pfam:PF04889
GO:GO:0005634 GO:GO:0005681 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000104 GO:GO:0000398 KO:K12863 PANTHER:PTHR12718
OrthoDB:EOG476P93 eggNOG:NOG326120 HOGENOM:HOG000214250 OMA:VFKNCAR
RefSeq:XP_663714.1 EnsemblFungi:CADANIAT00006902 GeneID:2871125
KEGG:ani:AN6110.2 Uniprot:Q5B020
Length = 232
Score = 112 (44.5 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 29/59 (49%), Positives = 33/59 (55%)
Query: 1 MTTAARPTFEPARGGQG-RGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRD 58
MTTA RPTF+PARG + RG Y R LP +T LK R+ GQGT E RD
Sbjct: 1 MTTAHRPTFDPARGKEALRGPA--------YHQRLLPAYTHLKVRQSGQGTEGEAARRD 51
>UNIPROTKB|Q5B020 [details] [associations]
symbol:cwc15 "Pre-mRNA-splicing factor cwc15"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR006973 Pfam:PF04889 GO:GO:0005634 GO:GO:0005681
GO:GO:0003723 EMBL:BN001301 EMBL:AACD01000104 GO:GO:0000398
KO:K12863 PANTHER:PTHR12718 OrthoDB:EOG476P93 eggNOG:NOG326120
HOGENOM:HOG000214250 OMA:VFKNCAR RefSeq:XP_663714.1
EnsemblFungi:CADANIAT00006902 GeneID:2871125 KEGG:ani:AN6110.2
Uniprot:Q5B020
Length = 232
Score = 112 (44.5 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 29/59 (49%), Positives = 33/59 (55%)
Query: 1 MTTAARPTFEPARGGQG-RGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEELRSRD 58
MTTA RPTF+PARG + RG Y R LP +T LK R+ GQGT E RD
Sbjct: 1 MTTAHRPTFDPARGKEALRGPA--------YHQRLLPAYTHLKVRQSGQGTEGEAARRD 51
>UNIPROTKB|G4MV62 [details] [associations]
symbol:MGG_08861 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR006973 Pfam:PF04889 GO:GO:0005681
GO:GO:0000398 EMBL:CM001232 KO:K12863 PANTHER:PTHR12718
RefSeq:XP_003713884.1 EnsemblFungi:MGG_08861T0 GeneID:2679847
KEGG:mgr:MGG_08861 Uniprot:G4MV62
Length = 250
Score = 110 (43.8 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 33/88 (37%), Positives = 41/88 (46%)
Query: 1 MTTAARPTFEPARGGQG-RGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEE------ 53
MTTA RPTF+PA+G + RG Y R LP HT+LKYR+ GQG +
Sbjct: 1 MTTAHRPTFDPAKGKEALRGPA--------YHQRLLPAHTQLKYRKRGQGGAADADGAID 52
Query: 54 LRSRDFXXXXXXXXXXXXXTARIRAPES 81
LR+ +A I AP S
Sbjct: 53 LRAELLAAEAAHASKSGNSSASIAAPSS 80
>UNIPROTKB|Q6C0E6 [details] [associations]
symbol:CWC15 "Pre-mRNA-splicing factor CWC15"
species:284591 "Yarrowia lipolytica CLIB122" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
InterPro:IPR006973 Pfam:PF04889 GO:GO:0005634 GO:GO:0005681
GO:GO:0003723 GO:GO:0000398 KO:K12863 PANTHER:PTHR12718
OrthoDB:EOG476P93 eggNOG:NOG326120 HOGENOM:HOG000214250
EMBL:CR382132 RefSeq:XP_505866.1 GeneID:2908528
GenomeReviews:CR382132_GR KEGG:yli:YALI0F25421g OMA:XHTTSSS
Uniprot:Q6C0E6
Length = 215
Score = 104 (41.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 25/53 (47%), Positives = 30/53 (56%)
Query: 1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYREHGQGTNEE 53
MTTA RPTF+PARG + + A +R LP HTKLKYR TN +
Sbjct: 1 MTTAHRPTFDPARG-----KSNTQAAGSISHTRSLPSHTKLKYRYARISTNTD 48
>GENEDB_PFALCIPARUM|PF07_0091 [details] [associations]
symbol:PF07_0091 "cell cycle control protein
cwf15 homologue" species:5833 "Plasmodium falciparum" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR006973
Pfam:PF04889 GO:GO:0005681 GO:GO:0051726 GO:GO:0000398
EMBL:AL844506 KO:K12863 PANTHER:PTHR12718 HOGENOM:HOG000214250
RefSeq:XP_001349126.1 ProteinModelPortal:Q8IBM8 PRIDE:Q8IBM8
EnsemblProtists:PF07_0091:mRNA GeneID:2655135 KEGG:pfa:PF07_0091
EuPathDB:PlasmoDB:PF3D7_0722500 OMA:DYNSSDN ProtClustDB:CLSZ2500646
Uniprot:Q8IBM8
Length = 291
Score = 95 (38.5 bits), Expect = 0.00031, P = 0.00031
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYRE 45
MTTA RPT+ A GG +G + + + SRDLPGH K+K R+
Sbjct: 1 MTTAHRPTWYNAIGGDNQGGNRKVSQTLKVCSRDLPGHLKMKTRD 45
>UNIPROTKB|Q8IBM8 [details] [associations]
symbol:PF07_0091 "Cell cycle control protein cwf15
homologue" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR006973
Pfam:PF04889 GO:GO:0005681 GO:GO:0051726 GO:GO:0000398
EMBL:AL844506 KO:K12863 PANTHER:PTHR12718 HOGENOM:HOG000214250
RefSeq:XP_001349126.1 ProteinModelPortal:Q8IBM8 PRIDE:Q8IBM8
EnsemblProtists:PF07_0091:mRNA GeneID:2655135 KEGG:pfa:PF07_0091
EuPathDB:PlasmoDB:PF3D7_0722500 OMA:DYNSSDN ProtClustDB:CLSZ2500646
Uniprot:Q8IBM8
Length = 291
Score = 95 (38.5 bits), Expect = 0.00031, P = 0.00031
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 1 MTTAARPTFEPARGGQGRGEKDLSAISKQYSSRDLPGHTKLKYRE 45
MTTA RPT+ A GG +G + + + SRDLPGH K+K R+
Sbjct: 1 MTTAHRPTWYNAIGGDNQGGNRKVSQTLKVCSRDLPGHLKMKTRD 45
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.128 0.363 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 95 71 0.00091 102 3 11 23 0.39 29
29 0.42 29
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 425 (45 KB)
Total size of DFA: 79 KB (2065 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 8.47u 0.11s 8.58t Elapsed: 00:00:01
Total cpu time: 8.47u 0.11s 8.58t Elapsed: 00:00:01
Start: Thu Aug 15 17:15:08 2013 End: Thu Aug 15 17:15:09 2013