BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2936
(174 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1HFO|A Chain A, The Structure Of The Macrophage Migration Inhibitory
Factor From Trichinella Spiralis.
pdb|1HFO|B Chain B, The Structure Of The Macrophage Migration Inhibitory
Factor From Trichinella Spiralis.
pdb|1HFO|C Chain C, The Structure Of The Macrophage Migration Inhibitory
Factor From Trichinella Spiralis.
pdb|1HFO|D Chain D, The Structure Of The Macrophage Migration Inhibitory
Factor From Trichinella Spiralis.
pdb|1HFO|E Chain E, The Structure Of The Macrophage Migration Inhibitory
Factor From Trichinella Spiralis.
pdb|1HFO|F Chain F, The Structure Of The Macrophage Migration Inhibitory
Factor From Trichinella Spiralis
Length = 113
Score = 116 bits (290), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 74/113 (65%)
Query: 2 PVFRIETNIPKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIAS 61
P+F + TNI +P++F T ALV L KP +YVAV + D L FGGS PAA +
Sbjct: 1 PIFTLNTNIKATDVPSDFLSSTSALVGNILSKPGSYVAVHINTDQQLSFGGSTNPAAFGT 60
Query: 62 LMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114
LMSIG + + N+ HSA LF H+ LGIPK+RMYI +++ + D VG+NGTTF
Sbjct: 61 LMSIGGIEPSRNRDHSAKLFDHLNTKLGIPKNRMYIHFVNLNGDDVGWNGTTF 113
>pdb|1MIF|A Chain A, Macrophage Migration Inhibitory Factor (Mif)
pdb|1MIF|B Chain B, Macrophage Migration Inhibitory Factor (Mif)
pdb|1MIF|C Chain C, Macrophage Migration Inhibitory Factor (Mif)
Length = 115
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 72/114 (63%)
Query: 1 MPVFRIETNIPKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIA 60
MP+F + TN+P+ +P F E +A+ GKP Y+AV VVPD + FGGS P A+
Sbjct: 1 MPMFIVNTNVPRASVPDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCALC 60
Query: 61 SLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114
SL SIGK+G A+N+ +S +L + + L I DR+YI+Y D + VG+N +TF
Sbjct: 61 SLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNAASVGWNNSTF 114
>pdb|3HOF|A Chain A, Structure Of Macrophage Migration Inhibitory Factor (Mif)
With Caffeic Acid At 1.9a Resolution
pdb|3HOF|B Chain B, Structure Of Macrophage Migration Inhibitory Factor (Mif)
With Caffeic Acid At 1.9a Resolution
pdb|3HOF|C Chain C, Structure Of Macrophage Migration Inhibitory Factor (Mif)
With Caffeic Acid At 1.9a Resolution
Length = 123
Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 72/114 (63%)
Query: 1 MPVFRIETNIPKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIA 60
MP+F + TN+P+ +P F E +A+ GKP Y+AV VVPD + FGGS P A+
Sbjct: 1 MPMFIVNTNVPRASVPDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCALC 60
Query: 61 SLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114
SL SIGK+G A+N+ +S +L + + L I DR+YI+Y D + VG+N +TF
Sbjct: 61 SLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNAANVGWNNSTF 114
>pdb|1GIF|A Chain A, Human Glycosylation-Inhibiting Factor
pdb|1GIF|B Chain B, Human Glycosylation-Inhibiting Factor
pdb|1GIF|C Chain C, Human Glycosylation-Inhibiting Factor
Length = 115
Score = 104 bits (260), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 72/114 (63%)
Query: 1 MPVFRIETNIPKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIA 60
MP+F + TN+P+ +P F E +A+ GKP Y+AV VVPD + FGGS P A+
Sbjct: 1 MPMFIVNTNVPRASVPDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCALC 60
Query: 61 SLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114
SL SIGK+G A+N+ +S +L + + L I DR+YI+Y D + VG+N +TF
Sbjct: 61 SLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNAANVGWNNSTF 114
>pdb|4ETG|A Chain A, Crystal Structure Of Mif L46g Mutant
pdb|4ETG|B Chain B, Crystal Structure Of Mif L46g Mutant
pdb|4ETG|C Chain C, Crystal Structure Of Mif L46g Mutant
Length = 114
Score = 103 bits (257), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 71/113 (62%)
Query: 2 PVFRIETNIPKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIAS 61
P+F + TN+P+ +P F E +A+ GKP Y+AV VVPD + FGGS P A+ S
Sbjct: 1 PMFIVNTNVPRASVPDGFLSELTQQLAQATGKPPQYIAVHVVPDQGMAFGGSSEPCALCS 60
Query: 62 LMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114
L SIGK+G A+N+ +S +L + + L I DR+YI+Y D + VG+N +TF
Sbjct: 61 LHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNAANVGWNNSTF 113
>pdb|4EVG|A Chain A, Crystal Structure Of Mif L46a Mutant
pdb|4EVG|B Chain B, Crystal Structure Of Mif L46a Mutant
pdb|4EVG|C Chain C, Crystal Structure Of Mif L46a Mutant
Length = 114
Score = 103 bits (256), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 71/113 (62%)
Query: 2 PVFRIETNIPKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIAS 61
P+F + TN+P+ +P F E +A+ GKP Y+AV VVPD + FGGS P A+ S
Sbjct: 1 PMFIVNTNVPRASVPDGFLSELTQQLAQATGKPPQYIAVHVVPDQAMAFGGSSEPCALCS 60
Query: 62 LMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114
L SIGK+G A+N+ +S +L + + L I DR+YI+Y D + VG+N +TF
Sbjct: 61 LHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNAANVGWNNSTF 113
>pdb|1GCZ|A Chain A, Macrophage Migration Inhibitory Factor (Mif) Complexed
With Inhibitor.
pdb|1GCZ|B Chain B, Macrophage Migration Inhibitory Factor (Mif) Complexed
With Inhibitor.
pdb|1GCZ|C Chain C, Macrophage Migration Inhibitory Factor (Mif) Complexed
With Inhibitor.
pdb|1GD0|A Chain A, Human Macrophage Migration Inhibitory Factor (Mif)
pdb|1GD0|B Chain B, Human Macrophage Migration Inhibitory Factor (Mif)
pdb|1GD0|C Chain C, Human Macrophage Migration Inhibitory Factor (Mif)
pdb|3JSF|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Hydroxyquinoline Inhibitor 638 At
1.93a Resolution
pdb|3JSF|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Hydroxyquinoline Inhibitor 638 At
1.93a Resolution
pdb|3JSF|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Hydroxyquinoline Inhibitor 638 At
1.93a Resolution
pdb|3JSG|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor Hydroxyquinoline Inhibitor 707 At 1.58a
Resolution
pdb|3JSG|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor Hydroxyquinoline Inhibitor 707 At 1.58a
Resolution
pdb|3JSG|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor Hydroxyquinoline Inhibitor 707 At 1.58a
Resolution
pdb|3JTU|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor Hydroxyquinoline Inhibitor 708 At 1.86a
Resolution
pdb|3JTU|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor Hydroxyquinoline Inhibitor 708 At 1.86a
Resolution
pdb|3JTU|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor Hydroxyquinoline Inhibitor 708 At 1.86a
Resolution
pdb|3L5P|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Imidazopyridazinol Inhibitor At 1.80a
Resolution
pdb|3L5P|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Imidazopyridazinol Inhibitor At 1.80a
Resolution
pdb|3L5P|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Imidazopyridazinol Inhibitor At 1.80a
Resolution
pdb|3L5R|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Phenylchromenone Inhibitor At 1.94a
Resolution
pdb|3L5R|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Phenylchromenone Inhibitor At 1.94a
Resolution
pdb|3L5R|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Phenylchromenone Inhibitor At 1.94a
Resolution
pdb|3L5S|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Imidazopyrimidinylphenyl Inhibitor At
1.86a Resolution
pdb|3L5S|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Imidazopyrimidinylphenyl Inhibitor At
1.86a Resolution
pdb|3L5S|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Imidazopyrimidinylphenyl Inhibitor At
1.86a Resolution
pdb|3L5T|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Thiophenepiperazinylquinolinone
Inhibitor At 1.86a Resolution
pdb|3L5T|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Thiophenepiperazinylquinolinone
Inhibitor At 1.86a Resolution
pdb|3L5T|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Thiophenepiperazinylquinolinone
Inhibitor At 1.86a Resolution
pdb|3L5U|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Benzothiazole Inhibitor At 1.90a
Resolution
pdb|3L5U|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Benzothiazole Inhibitor At 1.90a
Resolution
pdb|3L5U|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Benzothiazole Inhibitor At 1.90a
Resolution
pdb|3L5V|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Glycerol At 1.70a Resolution
pdb|3L5V|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Glycerol At 1.70a Resolution
pdb|3L5V|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor (Mif) With Glycerol At 1.70a Resolution
Length = 122
Score = 102 bits (255), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 71/113 (62%)
Query: 2 PVFRIETNIPKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIAS 61
P+F + TN+P+ +P F E +A+ GKP Y+AV VVPD + FGGS P A+ S
Sbjct: 1 PMFIVNTNVPRASVPDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCALCS 60
Query: 62 LMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114
L SIGK+G A+N+ +S +L + + L I DR+YI+Y D + VG+N +TF
Sbjct: 61 LHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNAANVGWNNSTF 113
>pdb|4EUI|A Chain A, Crystal Structure Of Mif L46f Mutant
pdb|4EUI|B Chain B, Crystal Structure Of Mif L46f Mutant
pdb|4EUI|C Chain C, Crystal Structure Of Mif L46f Mutant
Length = 114
Score = 102 bits (255), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 71/113 (62%)
Query: 2 PVFRIETNIPKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIAS 61
P+F + TN+P+ +P F E +A+ GKP Y+AV VVPD + FGGS P A+ S
Sbjct: 1 PMFIVNTNVPRASVPDGFLSELTQQLAQATGKPPQYIAVHVVPDQFMAFGGSSEPCALCS 60
Query: 62 LMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114
L SIGK+G A+N+ +S +L + + L I DR+YI+Y D + VG+N +TF
Sbjct: 61 LHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNAANVGWNNSTF 113
>pdb|1CA7|A Chain A, Macrophage Migration Inhibitory Factor (Mif) With
Hydroxphenylpyruvate
pdb|1CA7|B Chain B, Macrophage Migration Inhibitory Factor (Mif) With
Hydroxphenylpyruvate
pdb|1CA7|C Chain C, Macrophage Migration Inhibitory Factor (Mif) With
Hydroxphenylpyruvate
pdb|1LJT|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor Complexed With
(S,R)-3-(4-Hydroxyphenyl)-4,5-Dihydro-5-
Isoxazole-Acetic Acid Methyl Ester (Iso-1)
pdb|1LJT|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor Complexed With
(S,R)-3-(4-Hydroxyphenyl)-4,5-Dihydro-5-
Isoxazole-Acetic Acid Methyl Ester (Iso-1)
pdb|1LJT|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor Complexed With
(S,R)-3-(4-Hydroxyphenyl)-4,5-Dihydro-5-
Isoxazole-Acetic Acid Methyl Ester (Iso-1)
pdb|2OOH|A Chain A, Crystal Structure Of Mif Bound To A Novel Inhibitor,
Oxim-11
pdb|2OOH|B Chain B, Crystal Structure Of Mif Bound To A Novel Inhibitor,
Oxim-11
pdb|2OOH|C Chain C, Crystal Structure Of Mif Bound To A Novel Inhibitor,
Oxim-11
pdb|2OOW|A Chain A, Mif Bound To A Fluorinated Oxim Derivative
pdb|2OOW|B Chain B, Mif Bound To A Fluorinated Oxim Derivative
pdb|2OOW|C Chain C, Mif Bound To A Fluorinated Oxim Derivative
pdb|2OOZ|A Chain A, Macrophage Migration Inhibitory Factor (Mif) Complexed
With Oxim6 (An Oxim Derivative Not Containing A Ring In
Its R-Group)
pdb|2OOZ|B Chain B, Macrophage Migration Inhibitory Factor (Mif) Complexed
With Oxim6 (An Oxim Derivative Not Containing A Ring In
Its R-Group)
pdb|2OOZ|C Chain C, Macrophage Migration Inhibitory Factor (Mif) Complexed
With Oxim6 (An Oxim Derivative Not Containing A Ring In
Its R-Group)
pdb|3B9S|A Chain A, Macrophage Migration Inhibitory Factor (Mif) Complexed
With Inhibitor, 4-Ipp.
pdb|3B9S|B Chain B, Macrophage Migration Inhibitory Factor (Mif) Complexed
With Inhibitor, 4-Ipp.
pdb|3B9S|C Chain C, Macrophage Migration Inhibitory Factor (Mif) Complexed
With Inhibitor, 4-Ipp.
pdb|3DJH|A Chain A, Macrophage Migration Inhibitory Factor (Mif) At 1.25 A
Resolution
pdb|3DJH|B Chain B, Macrophage Migration Inhibitory Factor (Mif) At 1.25 A
Resolution
pdb|3DJH|C Chain C, Macrophage Migration Inhibitory Factor (Mif) At 1.25 A
Resolution
pdb|3DJI|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor Bound To An Acetaminophen Dimer Derived From
Napqi
pdb|3DJI|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor Bound To An Acetaminophen Dimer Derived From
Napqi
pdb|3DJI|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor Bound To An Acetaminophen Dimer Derived From
Napqi
pdb|3DJI|D Chain D, Crystal Structure Of Macrophage Migration Inhibitory
Factor Bound To An Acetaminophen Dimer Derived From
Napqi
pdb|3DJI|E Chain E, Crystal Structure Of Macrophage Migration Inhibitory
Factor Bound To An Acetaminophen Dimer Derived From
Napqi
pdb|3DJI|F Chain F, Crystal Structure Of Macrophage Migration Inhibitory
Factor Bound To An Acetaminophen Dimer Derived From
Napqi
pdb|3CE4|A Chain A, Structure Of Macrophage Migration Inhibitory Factor
Covalently Inhibited By Pmsf Treatment
pdb|3CE4|B Chain B, Structure Of Macrophage Migration Inhibitory Factor
Covalently Inhibited By Pmsf Treatment
pdb|3CE4|C Chain C, Structure Of Macrophage Migration Inhibitory Factor
Covalently Inhibited By Pmsf Treatment
pdb|3IJG|A Chain A, Macrophage Migration Inhibitory Factor (Mif) Bound To The
(R)- Stereoisomer Of Av1013
pdb|3IJG|B Chain B, Macrophage Migration Inhibitory Factor (Mif) Bound To The
(R)- Stereoisomer Of Av1013
pdb|3IJG|C Chain C, Macrophage Migration Inhibitory Factor (Mif) Bound To The
(R)- Stereoisomer Of Av1013
pdb|3IJJ|A Chain A, Ternary Complex Of Macrophage Migration Inhibitory Factor
(Mif) Bound Both To 4-Hydroxyphenylpyruvate And To The
Allosteric Inhibitor Av1013 (R-Stereoisomer)
pdb|3IJJ|B Chain B, Ternary Complex Of Macrophage Migration Inhibitory Factor
(Mif) Bound Both To 4-Hydroxyphenylpyruvate And To The
Allosteric Inhibitor Av1013 (R-Stereoisomer)
pdb|3IJJ|C Chain C, Ternary Complex Of Macrophage Migration Inhibitory Factor
(Mif) Bound Both To 4-Hydroxyphenylpyruvate And To The
Allosteric Inhibitor Av1013 (R-Stereoisomer)
pdb|4F2K|A Chain A, Macrophage Migration Inhibitory Factor Covalently
Complexed With Phenethylisothiocyanate
pdb|4F2K|B Chain B, Macrophage Migration Inhibitory Factor Covalently
Complexed With Phenethylisothiocyanate
pdb|4F2K|C Chain C, Macrophage Migration Inhibitory Factor Covalently
Complexed With Phenethylisothiocyanate
pdb|3U18|A Chain A, Chicago Sky Blue 6b, A Novel Inhibitor For Macrophage
Migration Inhibitory Factor
pdb|3U18|B Chain B, Chicago Sky Blue 6b, A Novel Inhibitor For Macrophage
Migration Inhibitory Factor
pdb|3U18|C Chain C, Chicago Sky Blue 6b, A Novel Inhibitor For Macrophage
Migration Inhibitory Factor
pdb|3SMB|A Chain A, Phenethylisothiocyanate Covalently Bound To Macrophage
Migration Inhibitory Factor (mif)
pdb|3SMB|B Chain B, Phenethylisothiocyanate Covalently Bound To Macrophage
Migration Inhibitory Factor (mif)
pdb|3SMB|C Chain C, Phenethylisothiocyanate Covalently Bound To Macrophage
Migration Inhibitory Factor (mif)
pdb|3SMC|A Chain A, Macrophage Migration Inhibitory Factor (mif) With
Covalently Bound L- Sulforaphane
pdb|3SMC|B Chain B, Macrophage Migration Inhibitory Factor (mif) With
Covalently Bound L- Sulforaphane
pdb|3SMC|C Chain C, Macrophage Migration Inhibitory Factor (mif) With
Covalently Bound L- Sulforaphane
Length = 114
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/113 (43%), Positives = 71/113 (62%)
Query: 2 PVFRIETNIPKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIAS 61
P+F + TN+P+ +P F E +A+ GKP Y+AV VVPD + FGGS P A+ S
Sbjct: 1 PMFIVNTNVPRASVPDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCALCS 60
Query: 62 LMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114
L SIGK+G A+N+ +S +L + + L I DR+YI+Y D + VG+N +TF
Sbjct: 61 LHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNAANVGWNNSTF 113
>pdb|1MFI|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor Complexed With (E)-2-Fluoro-P-Hydroxycinnamate
pdb|1MFI|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor Complexed With (E)-2-Fluoro-P-Hydroxycinnamate
pdb|1MFI|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor Complexed With (E)-2-Fluoro-P-Hydroxycinnamate
pdb|2GDG|A Chain A, Crystal Structure Of Covalently Modified Macrophage
Inhibitory Factor
pdb|2GDG|B Chain B, Crystal Structure Of Covalently Modified Macrophage
Inhibitory Factor
pdb|2GDG|C Chain C, Crystal Structure Of Covalently Modified Macrophage
Inhibitory Factor
Length = 114
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 71/113 (62%)
Query: 2 PVFRIETNIPKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIAS 61
P+F + TN+P+ +P F E +A+ GKP Y+AV VVPD + F G++ P A+ S
Sbjct: 1 PMFIVNTNVPRASVPEGFLSELTQQLAQATGKPAQYIAVHVVPDQLMTFSGTNDPCALCS 60
Query: 62 LMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114
L SIGK+G A+N+ +S +L + L I DR+YI+Y D + VG+NG+TF
Sbjct: 61 LHSIGKIGGAQNRNYSKLLCGLLSDRLHISPDRVYINYYDMNAANVGWNGSTF 113
>pdb|1UIZ|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor From Xenopus Laevis.
pdb|1UIZ|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor From Xenopus Laevis.
pdb|1UIZ|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor From Xenopus Laevis.
pdb|1UIZ|D Chain D, Crystal Structure Of Macrophage Migration Inhibitory
Factor From Xenopus Laevis
Length = 115
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 71/114 (62%)
Query: 1 MPVFRIETNIPKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIA 60
MPVF I TN+ ++ +P + +AK GKP Y+A+ +VPD + FG S P A+
Sbjct: 1 MPVFTIRTNVCRDSVPDTLLSDLTKQLAKATGKPAEYIAIHIVPDQIMSFGDSTDPCAVC 60
Query: 61 SLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114
SL SIGK+G +NK ++ +L + K L IP +R+YI+Y D + VG+NG+TF
Sbjct: 61 SLCSIGKIGGPQNKSYTKLLCDILTKQLNIPANRVYINYYDLNAANVGWNGSTF 114
>pdb|1FIM|A Chain A, Macrophage Migration Inhibitory Factor
Length = 114
Score = 100 bits (250), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 69/113 (61%)
Query: 2 PVFRIETNIPKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIAS 61
P F + TN+P+ +P F E +A+ GKP Y+AV VVPD F G+ P A+ S
Sbjct: 1 PAFIVNTNVPRASVPEGFLSELTQQLAQATGKPAQYIAVHVVPDQLXTFSGTSDPCALCS 60
Query: 62 LMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114
L SIGK+G A+N+ +S +L + L I DR+YI+Y D++ VG+NG+TF
Sbjct: 61 LHSIGKIGGAQNRNYSKLLCGLLSDRLHISPDRVYINYYDANAANVGWNGSTF 113
>pdb|1MFF|A Chain A, Macrophage Migration Inhibitory Factor Y95f Mutant
pdb|1MFF|B Chain B, Macrophage Migration Inhibitory Factor Y95f Mutant
pdb|1MFF|C Chain C, Macrophage Migration Inhibitory Factor Y95f Mutant
Length = 114
Score = 100 bits (250), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 71/113 (62%)
Query: 2 PVFRIETNIPKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIAS 61
P+F + TN+P+ +P F E +A+ GKP Y+AV VVPD + F G++ P A+ S
Sbjct: 1 PMFIVNTNVPRASVPEGFLSELTQQLAQATGKPAQYIAVHVVPDQLMTFSGTNDPCALCS 60
Query: 62 LMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114
L SIGK+G A+N+ +S +L + L I DR++I+Y D + VG+NG+TF
Sbjct: 61 LHSIGKIGGAQNRNYSKLLCGLLSDRLHISPDRVFINYYDMNAANVGWNGSTF 113
>pdb|1P1G|A Chain A, Macrophage Migration Inhibitory Factor (Mif) With Pro-1
Mutated To Gly-1
pdb|1P1G|B Chain B, Macrophage Migration Inhibitory Factor (Mif) With Pro-1
Mutated To Gly-1
pdb|1P1G|C Chain C, Macrophage Migration Inhibitory Factor (Mif) With Pro-1
Mutated To Gly-1
Length = 114
Score = 99.8 bits (247), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 70/112 (62%)
Query: 3 VFRIETNIPKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASL 62
+F + TN+P+ +P F E +A+ GKP Y+AV VVPD + FGGS P A+ SL
Sbjct: 2 MFIVNTNVPRASVPDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCALCSL 61
Query: 63 MSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114
SIGK+G A+N+ +S +L + + L I DR+YI+Y D + VG+N +TF
Sbjct: 62 HSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNAANVGWNNSTF 113
>pdb|1CGQ|A Chain A, Macrophage Migration Inhibitory Factor (Mif) With Alanine
Inserted Between Pro-1 And Met-2
pdb|1CGQ|B Chain B, Macrophage Migration Inhibitory Factor (Mif) With Alanine
Inserted Between Pro-1 And Met-2
pdb|1CGQ|C Chain C, Macrophage Migration Inhibitory Factor (Mif) With Alanine
Inserted Between Pro-1 And Met-2
Length = 115
Score = 99.8 bits (247), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 70/112 (62%)
Query: 3 VFRIETNIPKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASL 62
+F + TN+P+ +P F E +A+ GKP Y+AV VVPD + FGGS P A+ SL
Sbjct: 3 MFIVNTNVPRASVPDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCALCSL 62
Query: 63 MSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114
SIGK+G A+N+ +S +L + + L I DR+YI+Y D + VG+N +TF
Sbjct: 63 HSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNAANVGWNNSTF 114
>pdb|2OS5|A Chain A, Macrophage Migration Inhibitory Factor From Ancylostoma
Ceylanicum
pdb|2OS5|B Chain B, Macrophage Migration Inhibitory Factor From Ancylostoma
Ceylanicum
pdb|2OS5|C Chain C, Macrophage Migration Inhibitory Factor From Ancylostoma
Ceylanicum
pdb|2OS5|D Chain D, Macrophage Migration Inhibitory Factor From Ancylostoma
Ceylanicum
Length = 119
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 67/113 (59%)
Query: 1 MPVFRIETNIPKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIA 60
MP+ R+ TN+P + +PANF + L+A+++ KP N +A+ V+ + G S P A+
Sbjct: 1 MPMVRVATNLPDKDVPANFEERLTDLLAESMNKPRNRIAIEVLAGQRITHGASRNPVAVI 60
Query: 61 SLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTT 113
+ SIG L +N +H+ + + TL +PKD++ I+Y D VG+NGTT
Sbjct: 61 KVESIGALSADDNIRHTQKITQFCQDTLKLPKDKVIITYFDLQPIHVGFNGTT 113
>pdb|3RF4|A Chain A, Ancylostoma Ceylanicum Mif In Complex With Furosemide
pdb|3RF4|B Chain B, Ancylostoma Ceylanicum Mif In Complex With Furosemide
pdb|3RF4|C Chain C, Ancylostoma Ceylanicum Mif In Complex With Furosemide
pdb|3RF5|A Chain A, Ancylostoma Ceylanicum Mif In Complex With
N-(2,3,4,5,6-Pentafluoro- Benzyl)-4-Sulfamoyl-Benzamide
pdb|3RF5|B Chain B, Ancylostoma Ceylanicum Mif In Complex With
N-(2,3,4,5,6-Pentafluoro- Benzyl)-4-Sulfamoyl-Benzamide
pdb|3RF5|C Chain C, Ancylostoma Ceylanicum Mif In Complex With
N-(2,3,4,5,6-Pentafluoro- Benzyl)-4-Sulfamoyl-Benzamide
Length = 116
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 66/112 (58%)
Query: 2 PVFRIETNIPKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIAS 61
P+ R+ TN+P + +PANF + L+A+++ KP N +A+ V+ + G S P A+
Sbjct: 1 PMVRVATNLPDKDVPANFEERLTDLLAESMNKPRNRIAIEVLAGQRITHGASRNPVAVIK 60
Query: 62 LMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTT 113
+ SIG L +N +H+ + + TL +PKD++ I+Y D VG+NGTT
Sbjct: 61 VESIGALSADDNIRHTQKITQFCQDTLKLPKDKVIITYFDLQPIHVGFNGTT 112
>pdb|2XCZ|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor Homologue From Prochlorococcus Marinus
Length = 115
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 63/114 (55%)
Query: 1 MPVFRIETNIPKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIA 60
MP+ I+ ++P + +E + +A+ LGKPE YV + V + F G+ P
Sbjct: 1 MPLINIQASVPAVADANSLLQELSSKLAELLGKPEKYVMTSLQCGVPMTFSGNTEPTCYV 60
Query: 61 SLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114
+ SIG L + ++ S ++ HIE+ LGIP DR+YI + D + G+NG+TF
Sbjct: 61 EVKSIGALDGSRTQEVSELVCGHIEQNLGIPADRIYIGFEDVPARLWGWNGSTF 114
>pdb|1DPT|A Chain A, D-Dopachrome Tautomerase
pdb|1DPT|B Chain B, D-Dopachrome Tautomerase
pdb|1DPT|C Chain C, D-Dopachrome Tautomerase
pdb|3KAN|A Chain A, D-Dopachrome Tautomerase (D-Dt)MACROPHAGE MIGRATION
INHIBITORY FACTOR 2 (Mif2) Complexed With Inhibitor
4-Ipp
pdb|3KAN|B Chain B, D-Dopachrome Tautomerase (D-Dt)MACROPHAGE MIGRATION
INHIBITORY FACTOR 2 (Mif2) Complexed With Inhibitor
4-Ipp
pdb|3KAN|C Chain C, D-Dopachrome Tautomerase (D-Dt)MACROPHAGE MIGRATION
INHIBITORY FACTOR 2 (Mif2) Complexed With Inhibitor
4-Ipp
Length = 117
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 1/112 (0%)
Query: 2 PVFRIETNIPKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIAS 61
P ++TN+P ++PA K A A LGKP + V V V P + + GS P A S
Sbjct: 1 PFLELDTNLPANRVPAGLEKRLCAAAASILGKPADRVNVTVRPGLAMALSGSTEPCAQLS 60
Query: 62 LMSIGKLGTAE-NKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGT 112
+ SIG +GTAE N+ HSA F + K L + +DR+ I + + +G GT
Sbjct: 61 ISSIGVVGTAEDNRSHSAHFFEFLTKELALGQDRILIRFFPLESWQIGKIGT 112
>pdb|3KER|A Chain A, D-Dopachrome Tautomerase (D-Dt) MACROPHAGE MIGRATION
INHIBITORY Factor 2 (Mif2) Complexed With Inhibitor
4-Ipp
pdb|3KER|B Chain B, D-Dopachrome Tautomerase (D-Dt) MACROPHAGE MIGRATION
INHIBITORY Factor 2 (Mif2) Complexed With Inhibitor
4-Ipp
pdb|3KER|C Chain C, D-Dopachrome Tautomerase (D-Dt) MACROPHAGE MIGRATION
INHIBITORY Factor 2 (Mif2) Complexed With Inhibitor
4-Ipp
pdb|3KER|D Chain D, D-Dopachrome Tautomerase (D-Dt) MACROPHAGE MIGRATION
INHIBITORY Factor 2 (Mif2) Complexed With Inhibitor
4-Ipp
Length = 117
Score = 72.8 bits (177), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 1/112 (0%)
Query: 2 PVFRIETNIPKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIAS 61
P +ETN+P +IPA A A L KPE+ V+V + P + L+ S P A
Sbjct: 1 PFVELETNLPASRIPAGLENRLCAATATILDKPEDRVSVTIRPGMTLLMNKSTEPCAHLL 60
Query: 62 LMSIGKLGTAE-NKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGT 112
+ SIG +GTAE N+ HSA F + + L + +DR+ I + +G GT
Sbjct: 61 VSSIGVVGTAEQNRTHSASFFKFLTEELSLDQDRIVIRFFPLEAWQIGKKGT 112
>pdb|3FWT|A Chain A, Crystal Structure Of Leishmania Major Mif2
Length = 133
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 2/98 (2%)
Query: 17 ANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKLGTAENKKH 76
AN G + + LGKPE++V + F GS APAA + S G+ ++ K
Sbjct: 38 ANLSAAYGMICREELGKPEDFVMTAFSDKTPISFQGSTAPAAYVRVESWGEYAPSKPKMM 97
Query: 77 SAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114
+ + I K GIP +R+Y+ Y ST G+NGT F
Sbjct: 98 TPRIAAAITKECGIPAERIYVFYY--STKHCGWNGTNF 133
>pdb|4DH4|A Chain A, Macrophage Migration Inhibitory Factor Toxoplasma Gondii
Length = 114
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 48/94 (51%)
Query: 21 KETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKLGTAENKKHSAVL 80
K+ VA LGKP +YV V + FGGS P A + SIG + ++ N K +A L
Sbjct: 21 KDAEKAVADALGKPLSYVMVGYSQTGQMRFGGSSDPCAFIRVASIGGITSSTNCKIAAAL 80
Query: 81 FPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114
E+ LG+PK+R+Y ++ + S TF
Sbjct: 81 SAACERHLGVPKNRIYTTFTNKSPSEWAMGDRTF 114
>pdb|3FWU|A Chain A, Crystal Structure Of Leishmania Major Mif1
Length = 133
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 1 MPVFRIETNIPKEKIP-ANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAI 59
MPV + + P + N + A+ LGKPE+ V + + F GS P A
Sbjct: 21 MPVIQTFVSTPLDHHKRENLAQVYRAVTRDVLGKPEDLVMMTFHDSTPMHFFGSTDPVAC 80
Query: 60 ASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114
+ ++G G +E +K ++++ I K GI DR+++ Y S G+NGT F
Sbjct: 81 VRVEALGGYGPSEPEKVTSIVTAAITKECGIVADRIFVLYF--SPLHCGWNGTNF 133
>pdb|3B64|A Chain A, Macrophage Migration Inhibitory Factor (Mif) From
LEISHMANIA MAJOR
Length = 112
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 18 NFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKLGTAENKKHS 77
N + A+ LGKPE+ V + + F GS P A + ++G G +E +K +
Sbjct: 18 NLAQVYRAVTRDVLGKPEDLVMMTFHDSTPMHFFGSTDPVACVRVEALGGYGPSEPEKVT 77
Query: 78 AVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114
+++ I K GI DR+++ Y S G+NGT F
Sbjct: 78 SIVTAAITKECGIVADRIFVLYF--SPLHCGWNGTNF 112
>pdb|3T5S|A Chain A, Structure Of Macrophage Migration Inhibitory Factor From
Giardia Lamblia
Length = 135
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 1 MPVFRIETNIPKEKIPAN-FGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAI 59
MP + TN K A+ F + G ++AK GKP +Y + V ++ FG S
Sbjct: 22 MPCAIVTTNADFTKDQADAFCLDMGQVLAKETGKPVSYC-MAGVRKADMSFGTSTDLCCF 80
Query: 60 ASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114
IG + A+N SA + + + + +R+YIS+ ++ G+NG+TF
Sbjct: 81 VDFYCIGVISQAKNPSISAAITGCLTQHFKVKPERVYISFNEAKGHNWGFNGSTF 135
>pdb|2WKF|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor From Plasmodium Falciparum
Length = 125
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 5/113 (4%)
Query: 9 NIPKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKL 68
N+P + + + + A ++ +GKP Y+ NL FGGS+ + SIG +
Sbjct: 10 NLPDDNVQSTLSQIENA-ISDVMGKPLGYIMSNYDYQKNLRFGGSNEAYCFVRITSIGGI 68
Query: 69 GTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFHEIFGGP 121
+ N + + + L + R+Y+ + D S ++G+ +FGG
Sbjct: 69 NRSNNSALADQITKLLVSNLNVKSRRIYVEFRDCSAQNFAFSGS----LFGGS 117
>pdb|2WKF|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor From Plasmodium Falciparum
Length = 125
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 5/113 (4%)
Query: 9 NIPKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKL 68
N+P + + + + A ++ +GKP Y+ NL FGGS+ + SIG +
Sbjct: 10 NLPDDNVQSTLSQIENA-ISDVMGKPLGYIMSNYDYQKNLRFGGSNEAYCFVRITSIGGI 68
Query: 69 GTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFHEIFGGP 121
+ N + + + L + R+Y+ + D S ++G+ +FGG
Sbjct: 69 NRSNNSALADQITKLLVSNLNVKSRRIYVEFRDCSAQNFAFSGS----LFGGS 117
>pdb|3GAC|A Chain A, Structure Of Mif With Hpp
pdb|3GAC|B Chain B, Structure Of Mif With Hpp
pdb|3GAC|C Chain C, Structure Of Mif With Hpp
pdb|3GAC|D Chain D, Structure Of Mif With Hpp
pdb|3GAC|E Chain E, Structure Of Mif With Hpp
pdb|3GAC|F Chain F, Structure Of Mif With Hpp
pdb|3GAD|A Chain A, Structure Of Apomif
pdb|3GAD|B Chain B, Structure Of Apomif
pdb|3GAD|C Chain C, Structure Of Apomif
pdb|3GAD|D Chain D, Structure Of Apomif
pdb|3GAD|E Chain E, Structure Of Apomif
pdb|3GAD|F Chain F, Structure Of Apomif
Length = 117
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 49/115 (42%), Gaps = 3/115 (2%)
Query: 2 PVFRIETNI--PKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAI 59
P + TNI P +K N E ++ LGKP Y+ NL F GS+
Sbjct: 1 PCCELITNISIPDDK-AQNALSEIEDAISNVLGKPVAYIMSNYDYQKNLRFSGSNEGYCF 59
Query: 60 ASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114
L SIG + + N + + + LG+ R+YI + D S ++G+ F
Sbjct: 60 VRLTSIGGINRSNNSSLADKITKILSNHLGVKPRRVYIEFRDCSAQNFAFSGSLF 114
>pdb|2WKB|A Chain A, Crystal Structure Of Macrophage Migration Inhibitory
Factor From Plasmodium Berghei
pdb|2WKB|B Chain B, Crystal Structure Of Macrophage Migration Inhibitory
Factor From Plasmodium Berghei
pdb|2WKB|C Chain C, Crystal Structure Of Macrophage Migration Inhibitory
Factor From Plasmodium Berghei
pdb|2WKB|D Chain D, Crystal Structure Of Macrophage Migration Inhibitory
Factor From Plasmodium Berghei
pdb|2WKB|E Chain E, Crystal Structure Of Macrophage Migration Inhibitory
Factor From Plasmodium Berghei
pdb|2WKB|F Chain F, Crystal Structure Of Macrophage Migration Inhibitory
Factor From Plasmodium Berghei
Length = 125
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 5/111 (4%)
Query: 10 IPKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKLG 69
IP +K N E ++ LGKP Y+ NL F GS+ L SIG +
Sbjct: 11 IPDDK-AQNTLSEIEDAISNILGKPVAYIMSNYDYQKNLRFSGSNEGYCFVRLTSIGGIN 69
Query: 70 TAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFHEIFGG 120
+ N + + + L + R+YI + D S ++G+ +FGG
Sbjct: 70 RSNNSLLADKITKILSNHLSVKPRRVYIEFRDCSAQNFAFSGS----LFGG 116
>pdb|3EJK|A Chain A, Crystal Structure Of Dtdp Sugar Isomerase (yp_390184.1)
From Desulfovibrio Desulfuricans G20 At 1.95 A
Resolution
Length = 174
Score = 33.5 bits (75), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 12 KEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGS-DAPAAIASLMSI-GKLG 69
+EK P +G L TLG+P+NY + + P V F + D PA +A+ I + G
Sbjct: 93 REKSPT-----SGRLAQVTLGRPDNYRLLRIPPQVWYGFAATGDTPALVANCTDIPHRQG 147
Query: 70 TAENKKHSAVLFP 82
+E A P
Sbjct: 148 ESERAPQDAPFIP 160
>pdb|1ZLG|A Chain A, Solution Structure Of The Extracellular Matrix Protein
Anosmin-1
Length = 680
Score = 31.2 bits (69), Expect = 0.33, Method: Composition-based stats.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 22 ETGALVAKTLGKPENYVAVIVVPDVNL 48
E G +++K L KPEN A +V DVN+
Sbjct: 516 EAGHVLSKVLAKPENLSASFIVQDVNI 542
>pdb|4DWS|A Chain A, Crystal Structure Of A Chitinase From The Yersinia
Entomophaga Toxin Complex
Length = 546
Score = 28.9 bits (63), Expect = 1.5, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 83 HIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFHEIFGGPVLNKRAMESIVLEFKNVL 139
++ LGIP +++++ Y + VG + TT GP L ME+ EF +++
Sbjct: 376 YLHNELGIPMEKIHLGYANYGRSAVGGDLTTRQYTXNGPALG--TMENGAPEFFDIV 430
>pdb|4DWS|B Chain B, Crystal Structure Of A Chitinase From The Yersinia
Entomophaga Toxin Complex
Length = 546
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Query: 83 HIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFHEIFGGPVLNKRAMESIVLEFKNVLIKN 142
++ LGIP + +++ Y + VG + TT GP L ME+ EF ++ +KN
Sbjct: 376 YLHNELGIPMEXIHLGYANYGRSAVGGDLTTRQYTXNGPALG--TMENGAPEFFDI-VKN 432
Query: 143 QSTTTVAFSCG 153
+ S G
Sbjct: 433 YMDAEHSLSMG 443
>pdb|4DWS|D Chain D, Crystal Structure Of A Chitinase From The Yersinia
Entomophaga Toxin Complex
Length = 546
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 76 HSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFHEIFGGPVLNKRAMESIVLEF 135
+A+ + H E LGIP + +++ Y + VG + TT GP L ME+ EF
Sbjct: 371 EAAIDYLHNE--LGIPMEXIHLGYANYGRSAVGGDLTTRQYTXNGPALG--TMENGAPEF 426
Query: 136 KNVLIKNQSTTTVAFSCG 153
++ +KN + S G
Sbjct: 427 FDI-VKNYMDAEHSLSMG 443
>pdb|4DDD|A Chain A, Crystal Structure Of An Immunogenic Protein From Ehrlichia
Chaffeensis
Length = 327
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 95 MYISYIDSSTDVVGYNGTTFHEIFGGPVLNKRAMESIVLEFKNVLIKNQSTTTV 148
M IS + S + YNG F+E P+ N R + S+ E+ +++K S +V
Sbjct: 88 MDISIVQSDLEYYAYNGLGFYEKM-LPMDNLRMLASLHKEYLTIVVKKSSNISV 140
>pdb|3GHE|L Chain L, Crystal Structure Of Anti-Hiv-1 Fab 537-10d In Complex
With V3 Peptide Mn
Length = 217
Score = 28.1 bits (61), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 89 GIPKDRMYISYIDSSTDVVGYNGTTFHEIFGG 120
G P + IS +STDV GYN ++++ + G
Sbjct: 12 GSPGQSITISCTGTSTDVNGYNYVSWYQQYAG 43
>pdb|1YXA|A Chain A, Serpina3n, A Murine Orthologue Of Human Antichymotrypsin
pdb|1YXA|B Chain B, Serpina3n, A Murine Orthologue Of Human Antichymotrypsin
Length = 398
Score = 27.7 bits (60), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 19/75 (25%)
Query: 40 VIVVPDVNLVFGGSDAPAAIASLMSIGKLG----------------TAENKKHSAVLFPH 83
V+ PD N+VF AA+A L+S+G G T+E H F H
Sbjct: 43 VLKNPDTNIVFSPLSISAALA-LVSLGAKGNTLEEILEGLKFNLTETSEADIHQG--FGH 99
Query: 84 IEKTLGIPKDRMYIS 98
+ + L PKD++ IS
Sbjct: 100 LLQRLNQPKDQVQIS 114
>pdb|1DLW|A Chain A, X-Ray Crystal Structure Of Truncated Hemoglobin From
P.Caudatum.
pdb|1UVY|A Chain A, Heme-ligand Tunneling In Group I Truncated Hemoglobins
Length = 116
Score = 27.7 bits (60), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 20/38 (52%)
Query: 124 NKRAMESIVLEFKNVLIKNQSTTTVAFSCGLLGKPSDY 161
N +A ++ F + + NQ+ T AF C LG P+ +
Sbjct: 22 NIQADATVATFFNGIDMPNQTNKTAAFLCAALGGPNAW 59
>pdb|4DWS|C Chain C, Crystal Structure Of A Chitinase From The Yersinia
Entomophaga Toxin Complex
Length = 546
Score = 27.3 bits (59), Expect = 4.0, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 83 HIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFHEIFGGPVLNKRAMESIVLEFKNVL 139
++ LGIP + +++ Y + VG + TT GP L ME+ EF +++
Sbjct: 376 YLHNELGIPMEXIHLGYANYGRSAVGGDLTTRQYTXNGPALG--TMENGAPEFFDIV 430
>pdb|4GHB|A Chain A, Crystal Structure Of A Hypothetical Protein (Bacuni_01323)
From Bacteroides Uniformis Atcc 8492 At 2.32 A
Resolution
pdb|4GHB|B Chain B, Crystal Structure Of A Hypothetical Protein (Bacuni_01323)
From Bacteroides Uniformis Atcc 8492 At 2.32 A
Resolution
Length = 272
Score = 26.6 bits (57), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 10/23 (43%), Positives = 15/23 (65%)
Query: 25 ALVAKTLGKPENYVAVIVVPDVN 47
A+ K LG+P NY+ ++PD N
Sbjct: 204 AIYGKILGEPANYLITQLIPDSN 226
>pdb|1BWU|A Chain A, Mannose-Specific Agglutinin (Lectin) From Garlic (Allium
Sativum) Bulbs Complexed With Alpha-D-Mannose
Length = 106
Score = 26.6 bits (57), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 117 IFGGPVLNKRAMESIVLEFKNVLIKNQSTTTVAFSCGLLGKP 158
++GG L+ I+ E N+++ + ST+ A + G+LGK
Sbjct: 10 LYGGQSLDVNPYHFIMQEDCNLVLYDHSTSVWASNTGILGKK 51
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,093,929
Number of Sequences: 62578
Number of extensions: 195994
Number of successful extensions: 576
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 536
Number of HSP's gapped (non-prelim): 45
length of query: 174
length of database: 14,973,337
effective HSP length: 92
effective length of query: 82
effective length of database: 9,216,161
effective search space: 755725202
effective search space used: 755725202
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 48 (23.1 bits)