Query psy2936
Match_columns 174
No_of_seqs 136 out of 587
Neff 6.5
Searched_HMMs 29240
Date Fri Aug 16 21:24:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2936.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2936hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3djh_A Macrophage migration in 100.0 1.9E-39 6.7E-44 239.8 14.0 114 2-115 1-114 (114)
2 3kan_A D-dopachrome tautomeras 100.0 4E-39 1.4E-43 239.7 12.1 116 2-117 1-117 (117)
3 4dh4_A MIF; trimer, isomerase; 100.0 1.8E-38 6.1E-43 234.3 11.5 113 2-114 1-114 (114)
4 3t5s_A Gilaa.00834.A, macropha 100.0 1.5E-37 5.1E-42 236.9 9.0 113 1-114 22-135 (135)
5 3fwu_A Macrophage migration in 100.0 4.1E-37 1.4E-41 234.0 10.9 112 1-114 21-133 (133)
6 3fwt_A Macrophage migration in 100.0 7.5E-37 2.6E-41 232.4 11.7 112 1-114 21-133 (133)
7 1uiz_A MIF, macrophage migrati 100.0 3.2E-34 1.1E-38 211.2 14.2 114 1-115 1-115 (115)
8 2xcz_A Possible ATLS1-like lig 100.0 7.6E-34 2.6E-38 209.2 13.0 114 1-115 1-115 (115)
9 2os5_A Acemif; macrophage migr 100.0 5.5E-34 1.9E-38 211.4 12.0 116 1-117 1-117 (119)
10 1hfo_A Migration inhibitory fa 100.0 2.8E-33 9.5E-38 205.4 14.0 112 2-114 1-113 (113)
11 2wkb_A Macrophage migration in 100.0 2.2E-33 7.7E-38 210.1 10.2 118 2-119 1-119 (125)
12 3b64_A Macrophage migration in 100.0 2E-32 6.7E-37 200.9 11.0 111 2-114 1-112 (112)
13 2aal_A Malonate semialdehyde d 99.9 5.1E-27 1.7E-31 176.5 13.4 114 1-115 1-123 (131)
14 1mww_A Hypothetical protein HI 99.9 2E-25 6.8E-30 167.0 10.2 114 4-117 2-119 (128)
15 3n4h_A Putative tautomerase; C 99.9 2.1E-21 7.2E-26 148.6 9.9 124 3-126 2-131 (148)
16 3mlc_A FG41 malonate semialdeh 99.8 7.6E-18 2.6E-22 127.9 13.1 112 2-114 1-121 (136)
17 3c6v_A Probable tautomerase/de 99.7 3.7E-16 1.3E-20 122.0 9.5 116 1-117 22-144 (161)
18 3mf7_A CIS-3-chloroacrylic aci 99.6 1.4E-14 4.6E-19 111.8 10.2 127 12-143 13-143 (149)
19 2opa_A Probable tautomerase YW 99.6 8E-15 2.7E-19 95.3 6.8 59 59-117 2-60 (61)
20 1otf_A 4-oxalocrotonate tautom 99.5 1.1E-14 3.8E-19 94.8 6.6 59 59-117 2-60 (62)
21 3abf_A 4-oxalocrotonate tautom 99.5 6.2E-14 2.1E-18 91.9 6.5 60 58-117 2-61 (64)
22 1u9d_A Hypothetical protein VC 99.4 5.5E-13 1.9E-17 99.7 9.5 107 1-114 16-122 (122)
23 2x4k_A 4-oxalocrotonate tautom 99.4 2.3E-13 7.9E-18 88.2 6.5 60 57-116 3-62 (63)
24 3m21_A Probable tautomerase HP 99.4 3.5E-13 1.2E-17 89.8 7.2 59 59-117 2-63 (67)
25 3m20_A 4-oxalocrotonate tautom 99.4 7.5E-13 2.5E-17 87.1 6.7 58 59-117 2-59 (62)
26 3mb2_A 4-oxalocrotonate tautom 99.4 8.1E-13 2.8E-17 89.3 7.0 59 59-117 3-61 (72)
27 3ry0_A Putative tautomerase; o 99.4 7.4E-13 2.5E-17 87.6 6.1 59 59-117 2-60 (65)
28 3ej9_A Alpha-subunit of trans- 99.3 2.6E-12 8.7E-17 88.1 6.9 59 59-117 3-61 (76)
29 1gyx_A YDCE, B1461, hypothetic 99.0 4.6E-10 1.6E-14 76.4 5.2 51 59-109 2-53 (76)
30 3abf_A 4-oxalocrotonate tautom 99.0 4.1E-10 1.4E-14 73.4 4.2 54 1-54 1-57 (64)
31 3e6q_A Putative 5-carboxymethy 99.0 6.8E-09 2.3E-13 79.6 11.5 110 1-110 22-138 (146)
32 3ej9_B Beta-subunit of trans-3 98.9 4E-09 1.4E-13 70.8 6.4 58 59-116 2-59 (70)
33 1otg_A 5-carboxymethyl-2-hydro 98.9 1.6E-08 5.5E-13 75.2 9.8 110 2-111 1-119 (125)
34 2x4k_A 4-oxalocrotonate tautom 98.7 9.2E-09 3.1E-13 66.1 3.9 54 1-54 3-59 (63)
35 3mb2_A 4-oxalocrotonate tautom 98.6 4.7E-08 1.6E-12 65.6 4.6 54 1-54 1-57 (72)
36 3ej9_A Alpha-subunit of trans- 98.3 6E-07 2E-11 61.0 4.2 54 1-54 1-57 (76)
37 3n4h_A Putative tautomerase; C 98.3 1.8E-06 6.1E-11 65.3 6.6 58 59-116 2-60 (148)
38 2aal_A Malonate semialdehyde d 98.2 5.1E-06 1.7E-10 61.4 7.8 53 59-111 3-55 (131)
39 3mlc_A FG41 malonate semialdeh 98.2 3.6E-06 1.2E-10 63.2 6.4 53 59-111 2-54 (136)
40 3m20_A 4-oxalocrotonate tautom 98.1 3.6E-06 1.2E-10 54.7 5.2 52 2-54 1-55 (62)
41 3c6v_A Probable tautomerase/de 98.1 6.2E-06 2.1E-10 63.9 7.4 60 55-115 20-80 (161)
42 3mb2_B 4-oxalocrotonate tautom 98.0 1.4E-05 4.7E-10 53.7 6.6 47 60-106 3-51 (72)
43 3mf7_A CIS-3-chloroacrylic aci 98.0 8.5E-06 2.9E-10 62.3 5.6 50 65-114 9-58 (149)
44 3m21_A Probable tautomerase HP 97.9 1.1E-05 3.7E-10 53.0 4.7 53 2-54 1-59 (67)
45 1mww_A Hypothetical protein HI 97.9 9.5E-06 3.3E-10 59.6 3.9 52 60-111 2-53 (128)
46 3ry0_A Putative tautomerase; o 97.8 1.5E-05 5.2E-10 51.9 3.8 53 2-54 1-56 (65)
47 2opa_A Probable tautomerase YW 97.8 1.6E-05 5.5E-10 50.6 3.8 53 2-54 1-56 (61)
48 1otf_A 4-oxalocrotonate tautom 97.8 2.8E-05 9.7E-10 49.5 4.2 53 2-54 1-56 (62)
49 2wkb_A Macrophage migration in 97.3 0.00037 1.3E-08 51.0 6.0 54 1-54 57-113 (125)
50 2xcz_A Possible ATLS1-like lig 97.2 0.00064 2.2E-08 48.7 6.1 52 59-113 3-54 (115)
51 3b64_A Macrophage migration in 97.2 0.0006 2.1E-08 48.7 5.8 53 1-53 57-110 (112)
52 1hfo_A Migration inhibitory fa 97.1 0.00059 2E-08 48.7 4.8 53 1-53 56-111 (113)
53 3ej9_B Beta-subunit of trans-3 97.0 0.0011 3.6E-08 44.4 5.0 53 2-54 1-56 (70)
54 1uiz_A MIF, macrophage migrati 96.9 0.00099 3.4E-08 47.7 4.8 54 1-54 57-113 (115)
55 2os5_A Acemif; macrophage migr 96.7 0.0019 6.4E-08 46.6 4.9 54 1-54 57-113 (119)
56 1gyx_A YDCE, B1461, hypothetic 96.5 0.0027 9.2E-08 42.4 4.3 44 2-45 1-46 (76)
57 1u9d_A Hypothetical protein VC 96.3 0.0034 1.2E-07 46.4 3.9 52 1-53 67-120 (122)
58 3t5s_A Gilaa.00834.A, macropha 95.9 0.013 4.6E-07 43.5 5.6 52 3-54 80-134 (135)
59 3fwu_A Macrophage migration in 95.8 0.017 5.9E-07 42.7 5.9 52 3-54 80-132 (133)
60 3fwt_A Macrophage migration in 95.7 0.033 1.1E-06 41.1 6.9 58 54-113 18-75 (133)
61 4dh4_A MIF; trimer, isomerase; 95.3 0.054 1.9E-06 38.5 6.7 76 59-136 2-85 (114)
62 3djh_A Macrophage migration in 94.5 0.051 1.7E-06 38.7 4.9 52 3-54 58-112 (114)
63 3mb2_B 4-oxalocrotonate tautom 94.5 0.051 1.8E-06 36.3 4.4 43 2-44 1-46 (72)
64 1otg_A 5-carboxymethyl-2-hydro 87.9 0.27 9.3E-06 35.7 2.4 44 1-44 60-108 (125)
65 3kan_A D-dopachrome tautomeras 87.8 0.57 2E-05 33.4 4.0 75 59-136 2-85 (117)
66 1n91_A ORF, hypothetical prote 78.7 4.6 0.00016 28.9 5.6 58 37-99 16-74 (108)
67 2y9j_Y Lipoprotein PRGK, prote 63.5 12 0.00041 28.5 5.2 82 17-101 87-169 (170)
68 1jwq_A N-acetylmuramoyl-L-alan 57.3 58 0.002 24.5 8.2 84 3-90 76-178 (179)
69 3lax_A Phenylacetate-coenzyme 56.5 12 0.00041 25.3 3.8 42 52-93 42-83 (109)
70 1yfs_A Alanyl-tRNA synthetase; 50.4 13 0.00044 33.0 3.8 31 72-102 103-133 (465)
71 2hqs_H Peptidoglycan-associate 49.0 63 0.0022 22.3 7.2 28 70-98 52-83 (118)
72 3hrd_B Nicotinate dehydrogenas 48.6 13 0.00044 31.1 3.4 39 76-114 49-89 (330)
73 3hrd_B Nicotinate dehydrogenas 48.4 7.4 0.00025 32.6 1.9 74 12-95 42-123 (330)
74 3lxy_A 4-hydroxythreonine-4-ph 48.2 51 0.0018 27.8 7.1 70 24-98 141-210 (334)
75 1rm6_A 4-hydroxybenzoyl-COA re 44.2 14 0.00047 34.5 3.1 83 12-97 478-561 (769)
76 3e6q_A Putative 5-carboxymethy 42.8 20 0.00069 26.6 3.3 40 5-44 86-129 (146)
77 1t3q_B Quinoline 2-oxidoreduct 41.0 15 0.00051 34.4 2.8 83 12-97 503-585 (788)
78 2w3s_B Xanthine dehydrogenase; 37.8 11 0.00038 35.2 1.4 84 11-97 484-568 (777)
79 1ffv_B CUTL, molybdoprotein of 37.2 16 0.00055 34.3 2.4 82 12-96 519-601 (803)
80 1yxo_A 4-hydroxythreonine-4-ph 37.1 87 0.003 26.3 6.7 80 24-111 136-215 (328)
81 1n62_B Carbon monoxide dehydro 36.8 17 0.00058 34.1 2.5 78 12-96 525-607 (809)
82 3pa8_A Toxin B; CLAN CD cystei 34.9 1.5E+02 0.0052 24.0 7.6 82 23-104 47-157 (254)
83 3gxs_A Phenylacetate-coenzyme 34.7 1E+02 0.0035 20.6 6.4 45 52-101 42-88 (109)
84 1rm6_A 4-hydroxybenzoyl-COA re 34.2 33 0.0011 32.0 4.0 41 77-117 486-528 (769)
85 3hy0_A Alanyl-tRNA synthetase; 33.9 36 0.0012 30.0 3.9 29 73-101 103-133 (441)
86 2hi1_A 4-hydroxythreonine-4-ph 33.1 95 0.0033 26.1 6.3 80 23-111 142-221 (330)
87 3n3k_B Ubiquitin; hydrolase, p 32.3 42 0.0014 21.1 3.3 24 77-100 26-49 (85)
88 2ook_A Hypothetical protein; s 31.4 85 0.0029 22.0 5.1 47 55-102 17-63 (127)
89 2w3s_B Xanthine dehydrogenase; 30.7 36 0.0012 31.8 3.6 45 77-121 493-539 (777)
90 3a9j_A Ubiquitin; protein comp 30.3 50 0.0017 20.1 3.3 22 78-99 24-45 (76)
91 1ndd_A NEDD8, protein (ubiquit 29.7 52 0.0018 20.0 3.3 22 78-99 24-45 (76)
92 1n62_B Carbon monoxide dehydro 28.6 49 0.0017 30.9 4.2 40 78-117 534-575 (809)
93 1wh3_A 59 kDa 2'-5'-oligoadeny 28.6 64 0.0022 20.5 3.7 22 78-99 31-52 (87)
94 3mtn_B UBA80, ubcep1, ubiquiti 28.5 46 0.0016 20.9 2.9 23 77-99 26-48 (85)
95 2z5b_A Protein YPL144W, DMP1; 27.7 1.3E+02 0.0045 22.5 5.6 58 13-89 93-150 (151)
96 3eud_A Protein SHQ1; CS domain 26.9 21 0.00072 25.7 1.0 13 161-173 57-69 (115)
97 1ffv_B CUTL, molybdoprotein of 26.9 46 0.0016 31.2 3.6 41 77-117 527-569 (803)
98 1t0a_A 2C-methyl-D-erythritol 26.8 37 0.0013 25.8 2.5 49 60-112 96-144 (159)
99 2pmp_A 2-C-methyl-D-erythritol 26.7 37 0.0013 25.8 2.5 49 60-112 97-145 (160)
100 2q3l_A Uncharacterized protein 26.5 94 0.0032 21.8 4.6 47 55-102 17-63 (126)
101 1oey_A P67-PHOX, neutrophil cy 26.5 42 0.0014 22.6 2.5 33 79-111 28-60 (83)
102 1wxv_A BAG-family molecular ch 26.5 62 0.0021 21.0 3.4 22 78-99 35-56 (92)
103 2dzi_A Ubiquitin-like protein 26.1 66 0.0023 19.9 3.4 22 78-99 31-52 (81)
104 2faz_A Ubiquitin-like containi 25.6 66 0.0023 19.9 3.3 22 78-99 28-49 (78)
105 1wy8_A NP95-like ring finger p 25.5 75 0.0026 20.3 3.6 22 78-99 33-54 (89)
106 1gx1_A 2-C-methyl-D-erythritol 25.5 40 0.0014 25.6 2.5 49 60-112 95-143 (160)
107 3re3_A 2-C-methyl-D-erythritol 25.5 40 0.0014 25.7 2.4 50 59-112 99-148 (162)
108 3nvz_C Xanthine dehydrogenase/ 25.0 42 0.0014 31.2 3.0 40 78-117 474-515 (755)
109 2kd0_A LRR repeats and ubiquit 24.7 71 0.0024 20.7 3.4 22 78-99 35-56 (85)
110 2bwf_A Ubiquitin-like protein 24.4 73 0.0025 19.5 3.3 22 78-99 27-48 (77)
111 2daf_A FLJ35834 protein; hypot 24.3 72 0.0025 22.9 3.5 22 79-100 41-62 (118)
112 3phx_B Ubiquitin-like protein 24.2 72 0.0025 19.9 3.3 23 77-99 27-49 (79)
113 4b6w_A Tubulin-specific chaper 24.0 90 0.0031 20.5 3.8 26 78-103 28-53 (86)
114 2kjr_A CG11242; UBL, ubiquitin 23.8 1E+02 0.0034 20.7 4.1 24 78-101 41-64 (95)
115 3f0d_A 2-C-methyl-D-erythritol 23.7 45 0.0015 25.9 2.5 49 60-112 117-165 (183)
116 1sif_A Ubiquitin; hydrophobic 23.4 64 0.0022 20.9 2.9 22 78-99 33-54 (88)
117 3k9o_B Ubiquitin, UBB+1; E2-25 23.3 74 0.0025 20.6 3.3 23 77-99 24-46 (96)
118 2kan_A Uncharacterized protein 22.8 85 0.0029 20.8 3.5 22 78-99 38-59 (94)
119 3k13_A 5-methyltetrahydrofolat 22.6 1E+02 0.0036 25.3 4.7 30 68-97 148-177 (300)
120 2kk8_A Uncharacterized protein 22.4 80 0.0027 20.4 3.3 23 78-100 34-56 (84)
121 2kj6_A Tubulin folding cofacto 22.1 1.1E+02 0.0036 20.7 4.0 25 78-102 40-64 (97)
122 1wx7_A Ubiquilin 3; ubiquitin- 21.5 98 0.0034 20.7 3.7 22 78-99 40-61 (106)
123 1t3q_B Quinoline 2-oxidoreduct 21.4 48 0.0017 30.9 2.6 36 77-115 511-546 (788)
124 1yym_M F23, scorpion-toxin mim 21.2 13 0.00043 19.7 -0.8 7 151-157 12-18 (27)
125 1yx5_B Ubiquitin; proteasome, 21.1 86 0.0029 20.6 3.3 22 78-99 24-45 (98)
126 4eew_A Large proline-rich prot 21.1 88 0.003 19.9 3.3 22 78-99 41-62 (88)
127 2uyz_B Small ubiquitin-related 21.1 84 0.0029 19.5 3.1 20 80-99 29-48 (79)
128 3fiq_A OBP1, RCG36470, odorant 20.9 95 0.0032 22.3 3.7 37 59-97 112-148 (157)
129 1t0y_A Tubulin folding cofacto 20.2 1.2E+02 0.004 21.1 4.0 24 78-101 31-54 (122)
130 1wm3_A Ubiquitin-like protein 20.1 95 0.0032 19.4 3.2 22 79-100 26-47 (72)
No 1
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=100.00 E-value=1.9e-39 Score=239.81 Aligned_cols=114 Identities=43% Similarity=0.746 Sum_probs=111.3
Q ss_pred CeEEEEeCCCCCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCeeEEecCCCCceeEEEEEEeecCChHHHHHHHHHHH
Q psy2936 2 PVFRIETNIPKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKLGTAENKKHSAVLF 81 (174)
Q Consensus 2 P~i~i~TNv~~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~~m~fgGs~~P~a~veI~sig~~~~e~n~~~s~aI~ 81 (174)
|+|+++||++.++++++|++++++++|+++||||+||||+++++++|+|||+++||||++|+++|++++++|++++++||
T Consensus 1 P~i~~~TNv~~~~~~~~~~~~ls~~~a~~lgKpe~~vmV~~~~~~~m~fgGs~~P~a~~~v~sig~~~~~~n~~~s~~i~ 80 (114)
T 3djh_A 1 PMFIVNTNVPRASVPDGFLSELTQQLAQATGKPPQYIAVHVVPDQLMAFGGSSEPCALCSLHSIGKIGGAQNRSYSKLLC 80 (114)
T ss_dssp CEEEEEESSCGGGSCTTHHHHHHHHHHHHHCCCGGGCEEEEECSCEEEETTBCSSCEEEEEEESSCCSHHHHHHHHHHHH
T ss_pred CEEEEEecCCcccccHHHHHHHHHHHHHHHCCCHHHeEEEEeCCceEEEcCcCCCEEEEEEEEccCCCHHHHHHHHHHHH
Confidence 99999999996667899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhCCCCCcEEEEEEeCCCCCeeecCceec
Q psy2936 82 PHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFH 115 (174)
Q Consensus 82 ~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~~ 115 (174)
++++++||||++|+||.|+|++++||||||+||+
T Consensus 81 ~~l~~~Lgi~~~riyI~f~d~~~~~~g~~G~tf~ 114 (114)
T 3djh_A 81 GLLAERLRISPDRVYINYYDMNAANVGWNNSTFA 114 (114)
T ss_dssp HHHHHHHCCCGGGEEEEEEECCGGGEEETTEECC
T ss_pred HHHHHHhCcCcceEEEEEEECCHHHeeECCEECc
Confidence 9999999999999999999999999999999995
No 2
>3kan_A D-dopachrome tautomerase; immune response, cytokine, cytokine-inhibitor C; HET: RW1; 1.13A {Homo sapiens} SCOP: d.80.1.3 PDB: 1dpt_A* 3ker_A*
Probab=100.00 E-value=4e-39 Score=239.73 Aligned_cols=116 Identities=34% Similarity=0.594 Sum_probs=111.3
Q ss_pred CeEEEEeCCCCCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCeeEEecCCCCceeEEEEEEeecCCh-HHHHHHHHHH
Q psy2936 2 PVFRIETNIPKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKLGT-AENKKHSAVL 80 (174)
Q Consensus 2 P~i~i~TNv~~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~~m~fgGs~~P~a~veI~sig~~~~-e~n~~~s~aI 80 (174)
|+|+++||++.++++++|++++++++|+++||||+||||+++++++|+|||+++||||++|+++|++++ ++|++++++|
T Consensus 1 P~i~l~TNv~~~~~~~~l~~~ls~~~a~~lgKpe~~vmV~v~~~~~m~fgGs~~P~a~~~v~siG~~~~~~~n~~~s~~i 80 (117)
T 3kan_A 1 PFLELDTNLPANRVPAGLEKRLCAAAASILGKPADRVNVTVRPGLAMALSGSTEPCAQLSISSIGVVGTAEDNRSHSAHF 80 (117)
T ss_dssp CEEEEEESSCGGGSCTTHHHHHHHHHHHHHTCCGGGCEEEEECSCCCCBTTBCSSCEEEEEEEESSSSSHHHHHHHHHHH
T ss_pred CEEEEEecCccccchHHHHHHHHHHHHHHHCCChHHEEEEEeCCCeEEECCCCCceEEEEEEEecCCCcHHHHHHHHHHH
Confidence 999999999966667889999999999999999999999999999999999999999999999999976 7999999999
Q ss_pred HHHHHhhhCCCCCcEEEEEEeCCCCCeeecCceeccc
Q psy2936 81 FPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFHEI 117 (174)
Q Consensus 81 ~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~~~l 117 (174)
|++++++||||++|+||.|+|++++||||||+||+-|
T Consensus 81 ~~~l~~~Lgi~~~RiyI~f~d~~~~~~G~nG~tf~~~ 117 (117)
T 3kan_A 81 FEFLTKELALGQDRILIRFFPLESWQIGKIGTVMTFL 117 (117)
T ss_dssp HHHHHHHHTCCGGGEEEEEEEECGGGCEETTEEGGGC
T ss_pred HHHHHHHhCcCcCeEEEEEEEcCHHHeeeCCEEeecC
Confidence 9999999999999999999999999999999999854
No 3
>4dh4_A MIF; trimer, isomerase; 1.82A {Toxoplasma gondii}
Probab=100.00 E-value=1.8e-38 Score=234.26 Aligned_cols=113 Identities=31% Similarity=0.455 Sum_probs=110.8
Q ss_pred CeEEEEeCCCC-CCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCeeEEecCCCCceeEEEEEEeecCChHHHHHHHHHH
Q psy2936 2 PVFRIETNIPK-EKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKLGTAENKKHSAVL 80 (174)
Q Consensus 2 P~i~i~TNv~~-~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~~m~fgGs~~P~a~veI~sig~~~~e~n~~~s~aI 80 (174)
|+|+++||++. ++++++|++++++++|+++||||+|+||++++++.|+|||+++||||++|+++|++++++|++++++|
T Consensus 1 P~i~~~TNv~~~~~~~~~l~~~ls~~~a~~lgKPe~~v~V~~~~~~~m~fgGs~~p~a~v~i~~ig~~~~e~~~~l~~~i 80 (114)
T 4dh4_A 1 PKCMIFCPVAATPAQQDALLKDAEKAVADALGKPLSYVMVGYSQTGQMRFGGSSDPCAFIRVASIGGITSSTNCKIAAAL 80 (114)
T ss_dssp CEEEEEESSCCCHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEECSCCCBTTBCSCCEEEEEEEESCCCHHHHHHHHHHH
T ss_pred CEEEEEecCCCchhhHHHHHHHHHHHHHHHHCCChHHEEEEEeCCceEEECCcCCCeEEEEEEEEcCCCHHHHHHHHHHH
Confidence 99999999994 77899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhCCCCCcEEEEEEeCCCCCeeecCcee
Q psy2936 81 FPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114 (174)
Q Consensus 81 ~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~ 114 (174)
|++++++|||+++|+||.|+|++++||||||+||
T Consensus 81 ~~~l~~~Lgi~~~riyI~f~d~~~~~wg~~G~tf 114 (114)
T 4dh4_A 81 SAACERHLGVPKNRIYTTFTNKSPSEWAMGDRTF 114 (114)
T ss_dssp HHHHHHHHCCCGGGEEEEEEEECGGGCEETTEEC
T ss_pred HHHHHHHhCcCcccEEEEEEeCCHHHeEECCEeC
Confidence 9999999999999999999999999999999997
No 4
>3t5s_A Gilaa.00834.A, macrophage migration inhibitory factor; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Giardia lamblia}
Probab=100.00 E-value=1.5e-37 Score=236.88 Aligned_cols=113 Identities=27% Similarity=0.468 Sum_probs=92.6
Q ss_pred CCeEEEEeCCC-CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCeeEEecCCCCceeEEEEEEeecCChHHHHHHHHH
Q psy2936 1 MPVFRIETNIP-KEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKLGTAENKKHSAV 79 (174)
Q Consensus 1 MP~i~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~~m~fgGs~~P~a~veI~sig~~~~e~n~~~s~a 79 (174)
||+++|+||++ +++.+++|++++++++|+++|||++|+||+++ ++.|+|||+++||||++|+++|++++++|++++++
T Consensus 22 MP~i~i~tnv~~~~~~~~~l~~~ls~~la~~lgKPe~~vmV~v~-~~~m~fgGs~dp~a~v~i~sig~~t~e~n~~~s~~ 100 (135)
T 3t5s_A 22 MPCAIVTTNADFTKDQADAFCLDMGQVLAKETGKPVSYCMAGVR-KADMSFGTSTDLCCFVDFYCIGVISQAKNPSISAA 100 (135)
T ss_dssp CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCSCGGGCEEEEE-ECCCCBTTBCCSCEEEEEECCC-----CCHHHHHH
T ss_pred cceEEEEecCccchhccchhHHHHHHHHHHhhCCchHHHHhhhh-hhhcccCcccceEEEEEEEEEEEEeccCCchHHHH
Confidence 99999999999 44667999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred HHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCcee
Q psy2936 80 LFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114 (174)
Q Consensus 80 I~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~ 114 (174)
||++|+++||||++|+||.|.|++++||||||+||
T Consensus 101 i~~~l~~~Lgi~~~riyI~f~d~~~~~wg~nG~Tf 135 (135)
T 3t5s_A 101 ITGCLTQHFKVKPERVYISFNEAKGHNWGFNGSTF 135 (135)
T ss_dssp HHHHHHHHHCCCGGGEEEEEEC-------------
T ss_pred HHHHHHHhcccCccEEEEEeccccCcccccCCCcC
Confidence 99999999999999999999999999999999997
No 5
>3fwu_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.80A {Leishmania major}
Probab=100.00 E-value=4.1e-37 Score=233.96 Aligned_cols=112 Identities=29% Similarity=0.501 Sum_probs=108.0
Q ss_pred CCeEEEEeCCCCC-CchhhHHHHHHHHHHHHhCCCcceEEEEEeCCeeEEecCCCCceeEEEEEEeecCChHHHHHHHHH
Q psy2936 1 MPVFRIETNIPKE-KIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKLGTAENKKHSAV 79 (174)
Q Consensus 1 MP~i~i~TNv~~~-~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~~m~fgGs~~P~a~veI~sig~~~~e~n~~~s~a 79 (174)
||+++|+||++.+ +.+++|++++++++|+++||||+|+||++++++.|+|||+++||||++|+++|++++++|++++++
T Consensus 21 MP~i~i~tnv~~s~~~~~~l~~~ls~~la~~lgKPe~~vmV~~~~~~~m~fgGs~dP~a~v~i~sig~~~~e~n~~~s~~ 100 (133)
T 3fwu_A 21 MPVIQTFVSTPLDHHKRENLAQVYRAVTRDVLGKPEDLVMMTFHDSTPMHFFGSTDPVACVRVEALGGYGPSEPEKVTSI 100 (133)
T ss_dssp CCEEEEEESSCCCHHHHHHHHHHHHHHHHHTSCSCGGGCEEEEECSCCCCBTTBCSSCEEEEEECTTCCCTTHHHHHHHH
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHCcCccEEEEEEECCceEEECCcCCCEEEEEEEEcCCCCHHHHHHHHHH
Confidence 9999999999954 445689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCcee
Q psy2936 80 LFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114 (174)
Q Consensus 80 I~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~ 114 (174)
||++|+++|||+++|+||.|.|+ +||||||+||
T Consensus 101 i~~~l~~~LgI~~~riyI~f~d~--~~wG~nG~tf 133 (133)
T 3fwu_A 101 VTAAITKECGIVADRIFVLYFSP--LHCGWNGTNF 133 (133)
T ss_dssp HHHHHHHHHCCCGGGEEEEEECC--SCCEETTEEC
T ss_pred HHHHHHHHhCcChhhEEEEEEEH--HHEeeCcEEC
Confidence 99999999999999999999999 9999999997
No 6
>3fwt_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.90A {Leishmania major}
Probab=100.00 E-value=7.5e-37 Score=232.38 Aligned_cols=112 Identities=30% Similarity=0.556 Sum_probs=108.8
Q ss_pred CCeEEEEeCCC-CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCeeEEecCCCCceeEEEEEEeecCChHHHHHHHHH
Q psy2936 1 MPVFRIETNIP-KEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKLGTAENKKHSAV 79 (174)
Q Consensus 1 MP~i~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~~m~fgGs~~P~a~veI~sig~~~~e~n~~~s~a 79 (174)
||+++|+||++ +++..++|++++++++++++||||+|+||++++++.|+|||+++||||++|+++|++++++|++++++
T Consensus 21 MP~i~i~tnv~~s~~~~~~l~~~ls~~la~~lgKPe~~v~V~~~~~~~m~fgGs~dP~a~v~v~sig~~~~e~n~~~s~~ 100 (133)
T 3fwt_A 21 MPFLQTIVSVSLDDQKRANLSAAYGMICREELGKPEDFVMTAFSDKTPISFQGSTAPAAYVRVESWGEYAPSKPKMMTPR 100 (133)
T ss_dssp EEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHSCTTCCCEEEEECSCCCCBTTBCSSCEEEEEEEEECCCTHHHHHHHHH
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHHHHHHHhCcCcCEEEEEEECCceEEECCCCCCeEEEEEEECCCCCHHHHHHHHHH
Confidence 99999999999 44567999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCcee
Q psy2936 80 LFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114 (174)
Q Consensus 80 I~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~ 114 (174)
||++|+++|||+++|+||.|.|++ ||||||+||
T Consensus 101 i~~~l~~~LgI~~~rvyI~f~d~~--~wg~nG~Tf 133 (133)
T 3fwt_A 101 IAAAITKECGIPAERIYVFYYSTK--HCGWNGTNF 133 (133)
T ss_dssp HHHHHHHHHCCCGGGEEEEEEEES--CCEETTEEC
T ss_pred HHHHHHHHhCcChhhEEEEEEEhh--hEeECCEeC
Confidence 999999999999999999999997 999999998
No 7
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=100.00 E-value=3.2e-34 Score=211.18 Aligned_cols=114 Identities=42% Similarity=0.721 Sum_probs=111.3
Q ss_pred CCeEEEEeCCC-CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCeeEEecCCCCceeEEEEEEeecCChHHHHHHHHH
Q psy2936 1 MPVFRIETNIP-KEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKLGTAENKKHSAV 79 (174)
Q Consensus 1 MP~i~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~~m~fgGs~~P~a~veI~sig~~~~e~n~~~s~a 79 (174)
||+++|+||++ +++ +++|++++++++++++|||+++++|+++++..|+|||+++||+|++|+++|++++++|++++++
T Consensus 1 MP~i~i~~~~~~~~~-~~~l~~~~~~~l~~~lgkP~~~~~v~~~~~~~~~~~g~~~~~~~v~i~~~~g~~~eqk~~l~~~ 79 (115)
T 1uiz_A 1 MPVFTIRTNVCRDSV-PDTLLSDLTKQLAKATGKPAEYIAIHIVPDQIMSFGDSTDPCAVCSLCSIGKIGGPQNKSYTKL 79 (115)
T ss_dssp CCEEEEEESSCGGGS-CTTHHHHHHHHHHHHHTCCGGGCEEEEECSCEEEETTBCSSCEEEEEEESSCCSHHHHHHHHHH
T ss_pred CCEEEEEecCCCchh-HHHHHHHHHHHHHHHHCcChhHEEEEEECCcceEECCCCCCeEEEEEEEecCCCHHHHHHHHHH
Confidence 99999999999 566 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCceec
Q psy2936 80 LFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFH 115 (174)
Q Consensus 80 I~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~~ 115 (174)
|++.++++||++++|+||.|.|++++||||||+||+
T Consensus 80 i~~~l~~~lgi~~~~v~I~~~e~~~~~wg~~G~t~~ 115 (115)
T 1uiz_A 80 LCDILTKQLNIPANRVYINYYDLNAANVGWNGSTFA 115 (115)
T ss_dssp HHHHHHHHHCCCGGGEEEEEEECCGGGEEETTEECC
T ss_pred HHHHHHHHhCcCcceEEEEEEECCHHHeeeCCEECC
Confidence 999999999999999999999999999999999985
No 8
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=100.00 E-value=7.6e-34 Score=209.18 Aligned_cols=114 Identities=34% Similarity=0.637 Sum_probs=110.1
Q ss_pred CCeEEEEeCCC-CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCeeEEecCCCCceeEEEEEEeecCChHHHHHHHHH
Q psy2936 1 MPVFRIETNIP-KEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKLGTAENKKHSAV 79 (174)
Q Consensus 1 MP~i~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~~m~fgGs~~P~a~veI~sig~~~~e~n~~~s~a 79 (174)
||+++|+||++ +++ +++|++++++++++++|||+++++|+++++..|+|||+++|++|++|+++|++++++|++++++
T Consensus 1 MP~i~i~~~~~~~~~-~~~l~~~~~~~l~~~lgkp~~~~~v~~~~~~~~~~~g~~~~~~~v~i~~~~g~t~eqk~~l~~~ 79 (115)
T 2xcz_A 1 MPLINIQASVPAVAD-ANSLLQELSSKLAELLGKPEKYVMTSLQCGVPMTFSGNTEPTCYVEVKSIGALDGSRTQEVSEL 79 (115)
T ss_dssp -CEEEEEESSCCCTT-HHHHHHHHHHHHHHHHTCCGGGCEEEEECSCCCCBTTBCSSCEEEEEEESSCCCTTHHHHHHHH
T ss_pred CCEEEEEecCCCchh-HHHHHHHHHHHHHHHHCCChHHEEEEEECCCceEECCCCCcEEEEEEEEecCCCHHHHHHHHHH
Confidence 99999999999 555 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCceec
Q psy2936 80 LFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFH 115 (174)
Q Consensus 80 I~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~~ 115 (174)
|++.+++.||++++|+||.|.|++++||||||+||+
T Consensus 80 i~~~l~~~lgi~~~~v~I~~~e~~~~~wg~~G~t~~ 115 (115)
T 2xcz_A 80 VCGHIEQNLGIPADRIYIGFEDVPARLWGWNGSTFG 115 (115)
T ss_dssp HHHHHHHHHCCCGGGEEEEEEECCGGGCEETTEECC
T ss_pred HHHHHHHHhCcCcccEEEEEEECCHHHeeeCCEECc
Confidence 999999999999999999999999999999999985
No 9
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine, nematode,; 1.60A {Ancylostoma ceylanicum} PDB: 3rf4_A* 3rf5_A*
Probab=100.00 E-value=5.5e-34 Score=211.45 Aligned_cols=116 Identities=36% Similarity=0.637 Sum_probs=111.9
Q ss_pred CCeEEEEeCCC-CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCeeEEecCCCCceeEEEEEEeecCChHHHHHHHHH
Q psy2936 1 MPVFRIETNIP-KEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKLGTAENKKHSAV 79 (174)
Q Consensus 1 MP~i~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~~m~fgGs~~P~a~veI~sig~~~~e~n~~~s~a 79 (174)
||+++|+||++ +++ +++|++++++++++++|||+++++|+++++..|+|||+.+||+|++|+++|++++++|++++++
T Consensus 1 MP~i~i~~~~~~~~~-~~~l~~~~~~~l~~~lgkP~~~~~v~~~~~~~~~~~g~~~~~~~i~I~~~~g~~~eqk~~l~~~ 79 (119)
T 2os5_A 1 MPMVRVATNLPDKDV-PANFEERLTDLLAESMNKPRNRIAIEVLAGQRITHGASRNPVAVIKVESIGALSADDNIRHTQK 79 (119)
T ss_dssp -CEEEEEESSCGGGS-CTTHHHHHHHHHHHHHTCCGGGCEEEEECSCCCCBTTBCSSCEEEEEEESSCCCHHHHHHHHHH
T ss_pred CCEEEEEeCCCCchh-HHHHHHHHHHHHHHHHCcChHHEEEEEECCccEEEcCCCCCeEEEEEEEecCCCHHHHHHHHHH
Confidence 99999999999 555 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCceeccc
Q psy2936 80 LFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFHEI 117 (174)
Q Consensus 80 I~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~~~l 117 (174)
|++.++++||++++|+||.|+|++++||||||+|++++
T Consensus 80 i~~~l~~~lgi~~~~v~I~~~e~~~~~wg~~G~~~~~~ 117 (119)
T 2os5_A 80 ITQFCQDTLKLPKDKVIITYFDLQPIHVGFNGTTVAAA 117 (119)
T ss_dssp HHHHHHHHHCCCGGGEEEEEEECCGGGCEETTEEHHHH
T ss_pred HHHHHHHHhCcCcccEEEEEEECCHHHeeECCEEhhhh
Confidence 99999999999999999999999999999999999875
No 10
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=100.00 E-value=2.8e-33 Score=205.36 Aligned_cols=112 Identities=50% Similarity=0.860 Sum_probs=109.2
Q ss_pred CeEEEEeCCC-CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCeeEEecCCCCceeEEEEEEeecCChHHHHHHHHHH
Q psy2936 2 PVFRIETNIP-KEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKLGTAENKKHSAVL 80 (174)
Q Consensus 2 P~i~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~~m~fgGs~~P~a~veI~sig~~~~e~n~~~s~aI 80 (174)
|+++|+||++ +++ +++|++++++++++++|||++|+||+++++..|+|||+++||+|++|+++|++++++|++++++|
T Consensus 1 P~i~i~tn~~~~~~-~~~l~~~l~~~l~~~l~kPe~~~~v~~~~~~~~~~~g~~~~~~~i~i~~~~g~~~eqk~~l~~~i 79 (113)
T 1hfo_A 1 PIFTLNTNIKATDV-PSDFLSSTSALVGNILSKPGSYVAVHINTDQQLSFGGSTNPAAFGTLMSIGGIEPSRNRDHSAKL 79 (113)
T ss_dssp CEEEEEESSCGGGS-CTTHHHHHHHHHHHHHTCCGGGCEEEEECSCEEEETTBCSSCEEEEEEESSSCSHHHHHHHHHHH
T ss_pred CEEEEEecCCCccc-HHHHHHHHHHHHHHHHCCChHHEEEEEeCCccEEecCCCCCeEEEEEEEecCCCHHHHHHHHHHH
Confidence 9999999999 555 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhCCCCCcEEEEEEeCCCCCeeecCcee
Q psy2936 81 FPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114 (174)
Q Consensus 81 ~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~ 114 (174)
++.++++||++++|+||.|.|++++||||||.||
T Consensus 80 ~~~l~~~lgi~~~~v~I~~~e~~~~~wg~~G~tf 113 (113)
T 1hfo_A 80 FDHLNTKLGIPKNRMYIHFVNLNGDDVGWNGTTF 113 (113)
T ss_dssp HHHHHHHHCCCGGGEEEEEEECCGGGEEETTEEC
T ss_pred HHHHHHHhCcCcCeEEEEEEECCHHHeeeCCEeC
Confidence 9999999999999999999999999999999987
No 11
>2wkb_A Macrophage migration inhibitory factor; cytokine; HET: CME; 1.78A {Plasmodium berghei} PDB: 3gad_A 3gac_A 2wkf_A*
Probab=100.00 E-value=2.2e-33 Score=210.14 Aligned_cols=118 Identities=25% Similarity=0.358 Sum_probs=102.0
Q ss_pred CeEEEEeCCCC-CCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCeeEEecCCCCceeEEEEEEeecCChHHHHHHHHHH
Q psy2936 2 PVFRIETNIPK-EKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKLGTAENKKHSAVL 80 (174)
Q Consensus 2 P~i~i~TNv~~-~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~~m~fgGs~~P~a~veI~sig~~~~e~n~~~s~aI 80 (174)
|+++|+||++. ++.+++|++++++++++++|||++|+||+++++..|+|||+++||+|++|+++|++++++|++++++|
T Consensus 1 P~i~i~tn~~~s~~~~~~l~~~l~~ala~~lgkPe~~~~V~~~~~~~~~~gg~~dp~~~v~I~~~~g~t~eqk~~l~~~i 80 (125)
T 2wkb_A 1 PCCELITNISIPDDKAQNTLSEIEDAISNILGKPVAYIMSNYDYQKNLRFSGSNEGYCFVRLTSIGGINRSNNSLLADKI 80 (125)
T ss_dssp CEEEEEESCCCCHHHHHHHHHHHHHHHHHHHCSCCTTCEEEEEECTTCEETTBCSSCEEEEEECC-----CTHHHHHHHH
T ss_pred CEEEEEecCCCchhhHHHHHHHHHHHHHHHhCCCHHHEEEEEEcCCceEeCCCCCCcEEEEEEECCCCCHHHHHHHHHHH
Confidence 99999999994 45589999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhCCCCCcEEEEEEeCCCCCeeecCceeccccc
Q psy2936 81 FPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFHEIFG 119 (174)
Q Consensus 81 ~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~~~l~~ 119 (174)
++.+++.||++++|+||.|.|++++||||||+|++++.+
T Consensus 81 ~~~l~~~lgi~~~~v~I~~~e~~~~~wg~~G~~~~~~~~ 119 (125)
T 2wkb_A 81 TKILSNHLSVKPRRVYIEFRDCSAQNFAFSGSLFGGSRS 119 (125)
T ss_dssp HHHHHHHHCCCGGGEEEEEEC----CEEEEGGGTC----
T ss_pred HHHHHHHhCcCcceEEEEEEECCHHHeEECCEEhhhhhc
Confidence 999999999999999999999999999999999998744
No 12
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=99.98 E-value=2e-32 Score=200.94 Aligned_cols=111 Identities=28% Similarity=0.456 Sum_probs=107.1
Q ss_pred CeEEEEeCCCCCCchhhHHHHHHHHHH-HHhCCCcceEEEEEeCCeeEEecCCCCceeEEEEEEeecCChHHHHHHHHHH
Q psy2936 2 PVFRIETNIPKEKIPANFGKETGALVA-KTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKLGTAENKKHSAVL 80 (174)
Q Consensus 2 P~i~i~TNv~~~~~~~~f~~~ls~~va-evlgKPe~~ImV~i~~~~~m~fgGs~~P~a~veI~sig~~~~e~n~~~s~aI 80 (174)
|+++|+||++.++.+++|+++++++++ +++|||++|+||+++++..|+|||+++||+|++|+++|++++++|++++++|
T Consensus 1 P~i~i~tn~~~~~~~~~l~~~~~~~l~~~~~gkPe~~~~v~~~~~~~~~~~G~~~~~~~i~i~~~~g~~~eqk~~l~~~i 80 (112)
T 3b64_A 1 PVIQTFVSTPLDHHKRENLAQVYRAVTRDVLGKPEDLVMMTFHDSTPMHFFGSTDPVACVRVEALGGYGPSEPEKVTSIV 80 (112)
T ss_dssp CEEEEEESSCCCHHHHHHHHHHHHHHHHHTSCSCGGGCEEEEECSCCCCBTTBCSSCEEEEEECTTCCCTTHHHHHHHHH
T ss_pred CEEEEEecCCCchhHHHHHHHHHHHHHHHHhCCCHHHEEEEEeCCceEEECCCCCCEEEEEEEEcCCCCHHHHHHHHHHH
Confidence 999999999944349999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhCCCCCcEEEEEEeCCCCCeeecCcee
Q psy2936 81 FPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114 (174)
Q Consensus 81 ~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~ 114 (174)
++.++++||++++|+||.|+|++ ||||||+||
T Consensus 81 ~~~l~~~lgi~~~~v~I~~~e~~--~wg~~G~tf 112 (112)
T 3b64_A 81 TAAITKECGIVADRIFVLYFSPL--HCGWNGTNF 112 (112)
T ss_dssp HHHHHHHHCCCGGGEEEEEECCS--CCEETTEEC
T ss_pred HHHHHHHhCcCcceEEEEEEEhh--HeeECCEEC
Confidence 99999999999999999999998 999999987
No 13
>2aal_A Malonate semialdehyde decarboxylase; tautomerase superfamily, beta-alpha-beta, homotrimeric, LYAS; 1.65A {Pseudomonas pavonaceae} SCOP: d.80.1.6 PDB: 2aag_A 2aaj_A
Probab=99.95 E-value=5.1e-27 Score=176.51 Aligned_cols=114 Identities=11% Similarity=0.196 Sum_probs=107.2
Q ss_pred CCeEEEEeCCC-CCCchhhHHHHHHHHHHHHhCCCcc--eEEEEEeCCeeEEecC------CCCceeEEEEEEeecCChH
Q psy2936 1 MPVFRIETNIP-KEKIPANFGKETGALVAKTLGKPEN--YVAVIVVPDVNLVFGG------SDAPAAIASLMSIGKLGTA 71 (174)
Q Consensus 1 MP~i~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe~--~ImV~i~~~~~m~fgG------s~~P~a~veI~sig~~~~e 71 (174)
||+++|++|.+ +++++++|++++++++++.+|||++ +++++..+..+|.+|| +++|+++++|+ ..+++++
T Consensus 1 MP~i~I~~~~~~~~e~k~~l~~~i~~al~~~~g~p~~~~~v~i~~~~~~~~~~~g~~l~~~~~~~~~~I~i~-~~grt~e 79 (131)
T 2aal_A 1 XPLLKFDLFYGRTDAQIKSLLDAAHGAMVDAFGVPANDRYQTVSQHRPGEMVLEDTGLGYGRSSAVVLLTVI-SRPRSEE 79 (131)
T ss_dssp -CEEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCCTTCCEEEEEEECTTSEEECCTTSCCCCCTTCEEEEEE-ESCCCHH
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcChhHEEEEEEEECHHHcccCCccCCcCCCCCeEEEEEE-eCCCCHH
Confidence 99999999999 5667999999999999999999999 7788888999999998 78999999999 6779999
Q ss_pred HHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCceec
Q psy2936 72 ENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFH 115 (174)
Q Consensus 72 ~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~~ 115 (174)
+|++++++|++.+++.||++++++||.|.|++++||||||.+|.
T Consensus 80 qK~~l~~~l~~~l~~~lg~~~~~v~I~i~e~~~~~wg~gG~~~q 123 (131)
T 2aal_A 80 QKVCFYKLLTGALERDCGISPDDVIVALVENSDADWSFGRGRAE 123 (131)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGEEEEEEECCGGGEECBTTBCH
T ss_pred HHHHHHHHHHHHHHHHhCcCcccEEEEEEEcCHHHeeECCEEhh
Confidence 99999999999999999999999999999999999999999984
No 14
>1mww_A Hypothetical protein HI1388.1; structural genomics, structure 2 function project, S2F, unknown function; HET: GLU; 2.08A {Haemophilus influenzae} SCOP: d.80.1.4
Probab=99.92 E-value=2e-25 Score=167.02 Aligned_cols=114 Identities=12% Similarity=0.143 Sum_probs=106.5
Q ss_pred EEEEeCCC-CCCchhhHHHHHHHHHHHHhCCCcc--eEEEEEeCCeeEEecC-CCCceeEEEEEEeecCChHHHHHHHHH
Q psy2936 4 FRIETNIP-KEKIPANFGKETGALVAKTLGKPEN--YVAVIVVPDVNLVFGG-SDAPAAIASLMSIGKLGTAENKKHSAV 79 (174)
Q Consensus 4 i~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe~--~ImV~i~~~~~m~fgG-s~~P~a~veI~sig~~~~e~n~~~s~a 79 (174)
++|+.... +.+++++|++++++++++.+|||++ +++++..+..+|.+|| +++|+++++|++++++++|+|++++++
T Consensus 2 v~I~~~~g~s~e~~~~l~~~i~~al~~~lg~p~~~~~v~i~~~~~~~~~~gg~~~~~~~~i~i~~~~grt~eqK~~l~~~ 81 (128)
T 1mww_A 2 ITVFGLKSKLAPRREKLAEVIYNSLHLGLDIPKGKHAIRFLCLEKEDFYYPFDRSDDYTVIEINLMAGRMEGTKKRLIKM 81 (128)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCTTSSCEEEEEECGGGEECCTTSCTTCEEEEEEEETTCCHHHHHHHHHH
T ss_pred EEEEEeCCCCHHHHHHHHHHHHHHHHHHHCcChHHEEEEEEEeChHHeecCCCCCCCcEEEEEEECCCCCHHHHHHHHHH
Confidence 45555555 5678899999999999999999999 9999999999999998 889999999999999999999999999
Q ss_pred HHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCceeccc
Q psy2936 80 LFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFHEI 117 (174)
Q Consensus 80 I~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~~~l 117 (174)
|++.+.+.||++++++||.|.|++++||||||.+++++
T Consensus 82 l~~~l~~~lg~~~~~v~V~i~e~~~~~wg~gG~~~~~~ 119 (128)
T 1mww_A 82 LFSELEYKLGIRAHDVEITIKEQPAHCWGFRGMTGDEA 119 (128)
T ss_dssp HHHHHHHHHCCCGGGEEEEEEEECGGGEEETTEETTTC
T ss_pred HHHHHHHHhCcChhhEEEEEEECCHHHeeECCEEHHHH
Confidence 99999999999999999999999999999999999876
No 15
>3n4h_A Putative tautomerase; CG10062, CIS-3-chloroacrylic acid dehalogenase, tautomerase superfamily, beta-alpha-beta motif, hydrolase; HET: PR7; 2.02A {Corynebacterium glutamicum} PDB: 3n4d_A* 3n4g_A
Probab=99.85 E-value=2.1e-21 Score=148.63 Aligned_cols=124 Identities=10% Similarity=0.052 Sum_probs=100.6
Q ss_pred eEEEEeCCC--CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeC--CeeEEecCCCCce--eEEEEEEeecCChHHHHHH
Q psy2936 3 VFRIETNIP--KEKIPANFGKETGALVAKTLGKPENYVAVIVVP--DVNLVFGGSDAPA--AIASLMSIGKLGTAENKKH 76 (174)
Q Consensus 3 ~i~i~TNv~--~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~--~~~m~fgGs~~P~--a~veI~sig~~~~e~n~~~ 76 (174)
+++|+.... +.+++++|.+.+++++++++|+|+++++|.+++ ..+|++||...++ +++++.+++++++++|+++
T Consensus 2 ~~~I~~~~g~~s~e~k~~L~~~it~al~~~lg~p~~~v~V~i~e~~~~~~~~gG~~~s~~~~~I~i~~~~Grt~eqk~~l 81 (148)
T 3n4h_A 2 TYTCWSQRIRISREAKQRIAEAITDAHHELAHAPKYLVQVIFNEVEPDSYFIAAQSASENHIWVQATIRSGRTEKQKEEL 81 (148)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEEECGGGCEETTEECCTTCEEEEEEEESCCCHHHHHHH
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHHHHHHCcCcccEEEEEEEEChHHeEECCEEccCcEEEEEEEEECCCCHHHHHHH
Confidence 456666544 456789999999999999999999999998875 6799999986555 9999999999999999999
Q ss_pred HHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCceecccccCccchHH
Q psy2936 77 SAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFHEIFGGPVLNKR 126 (174)
Q Consensus 77 s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~~~l~~~~~~~~~ 126 (174)
+++|++.+.+.||++++++||.|.+++++|||+||.++.+.-++.+|...
T Consensus 82 ~~~l~~~l~~~lgi~~~~v~V~i~E~~~~~wg~gG~~~~~~g~e~~W~~~ 131 (148)
T 3n4h_A 82 LLRLTQEIALILGIPNEEVWVYITEIPGSNMTEYGRLLMEPGEEEKWFNS 131 (148)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEEEEECGGGCCCSSCC-------------
T ss_pred HHHHHHHHHHHhCcCcCcEEEEEEEcCHHHeeECCEECCCCcchHHHHHh
Confidence 99999999999999999999999999999999999999887666666553
No 16
>3mlc_A FG41 malonate semialdehyde decarboxylase; tautomerase superfamily, malonate semialdehyde decarboxylase alpha-beta-motif; 2.22A {Coryneform bacterium} SCOP: d.80.1.0 PDB: 3mjz_A
Probab=99.76 E-value=7.6e-18 Score=127.92 Aligned_cols=112 Identities=9% Similarity=0.167 Sum_probs=101.1
Q ss_pred CeEEEEeCCC-CCCchhhHHHHHHHHHHHHhCCCcceEEEEE--eCCeeEEecC------CCCceeEEEEEEeecCChHH
Q psy2936 2 PVFRIETNIP-KEKIPANFGKETGALVAKTLGKPENYVAVIV--VPDVNLVFGG------SDAPAAIASLMSIGKLGTAE 72 (174)
Q Consensus 2 P~i~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i--~~~~~m~fgG------s~~P~a~veI~sig~~~~e~ 72 (174)
|+++|+.... +.+++++|.+.+++++++.+|.|++++.+.+ .+..+|.+++ .+++..+++|+.+++++.|+
T Consensus 1 P~v~I~l~~Grs~e~k~~L~~~it~al~e~~~vP~~dv~vii~e~~~~~~~~~~~ylg~~rs~~~v~I~I~~~~gRt~Eq 80 (136)
T 3mlc_A 1 PLIRIDLTSDRSREQRRAIADAVHDALVEVLAIPARDRFQILTAHDPSDIIAEDAGLGFQRSPSVVIIHVFTQAGRTIET 80 (136)
T ss_dssp CEEEEEEETTSCSHHHHHHHHHHHHHHHHHHCCCTTCCEEEEEEECGGGEEECCTTSSCCCCSCCEEEEEEEETTCCHHH
T ss_pred CEEEEEEeCCCCHHHHHHHHHHHHHHHHHHhCcChhHEEEEEEEcCHHHccccccccCcCCCCCeEEEEEEECCCCCHHH
Confidence 8999999888 7888999999999999999999999766555 4556776553 36899999999999999999
Q ss_pred HHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCcee
Q psy2936 73 NKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114 (174)
Q Consensus 73 n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~ 114 (174)
+++++++|++.+ +.||+++++++|.+.+++++|||++|+..
T Consensus 81 K~~L~~~it~~l-~~lg~~~~~v~V~i~E~~~~~W~~ggG~a 121 (136)
T 3mlc_A 81 KQRVFAAITESL-APIGVAGSDVFIAITENAPHDWSFGFGSA 121 (136)
T ss_dssp HHHHHHHHHHHH-TTTTCCGGGEEEEEEEECGGGEECBTTBC
T ss_pred HHHHHHHHHHHH-HHcCCCcccEEEEEEEcCHHHeeecCcEe
Confidence 999999999999 99999999999999999999999999865
No 17
>3c6v_A Probable tautomerase/dehalogenase AU4130; aspergillus fumigatus trimeric thermophilic probable tautomerase/dehalogenase; HET: MSE; 1.90A {Aspergillus fumigatus AF293}
Probab=99.65 E-value=3.7e-16 Score=121.99 Aligned_cols=116 Identities=12% Similarity=0.116 Sum_probs=99.9
Q ss_pred CCeEEEEeCCC--CCCchhhHHHHHHHHHHHHhCCCcceEEEEEe--CCeeEEecCCC-CceeEEEEEE--eecCChHHH
Q psy2936 1 MPVFRIETNIP--KEKIPANFGKETGALVAKTLGKPENYVAVIVV--PDVNLVFGGSD-APAAIASLMS--IGKLGTAEN 73 (174)
Q Consensus 1 MP~i~i~TNv~--~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~--~~~~m~fgGs~-~P~a~veI~s--ig~~~~e~n 73 (174)
||+++|+.-.. +.+++++|.+++++++.++ |+|..++.|.+. +...++.||.. +...+++|.. ..+++.+++
T Consensus 22 MP~v~I~~~~G~~t~eqk~~L~~~It~alve~-g~P~~~v~V~i~e~~~~~~~~gg~~~~~~v~I~I~~~a~~gRt~eqK 100 (161)
T 3c6v_A 22 MPRWLIQHSPNTLTPEEKSHLAQQITQAYVGF-GLPAFYVQVHFIEQPAGTSFIGGEQHPNFVALTIYHLARTMTSDEQR 100 (161)
T ss_dssp CCEEEEEECTTSSCHHHHHHHHHHHHHHHHHT-TCCGGGCEEEEEECCTTSEEETTEECSSEEEEEEEEETTSCCSHHHH
T ss_pred CCEEEEEEcCCCCCHHHHHHHHHHHHHHHHHh-CcChhhEEEEEEEeCccceeECCcccCCEEEEEEEeccCCCCCHHHH
Confidence 99999997655 4568999999999999999 999998777664 46688899854 5566666633 467999999
Q ss_pred HHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCceeccc
Q psy2936 74 KKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFHEI 117 (174)
Q Consensus 74 ~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~~~l 117 (174)
+++.++|++.|++.+|+++++++|.+.+.+++||+++|.+..+.
T Consensus 101 ~~l~~~l~~~L~~~~gi~~~dv~I~I~E~~~e~Wsf~G~~~P~~ 144 (161)
T 3c6v_A 101 QGFLKRIDAFLTPMFEPKGIDWEYFVTEAPRDLWKINGLAPPAA 144 (161)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEEEECGGGCEETTBCCCCT
T ss_pred HHHHHHHHHHHHHHcCCChhhEEEEEEEcCccceEECCCcCCCC
Confidence 99999999999999999999999999999999999999987655
No 18
>3mf7_A CIS-3-chloroacrylic acid dehalogenase; beta-alpha-beta motif, tautomerase, CIS-3-CHLO acid dehalogenase, isomerase, hydrolase; HET: PR4; 1.65A {Coryneform bacterium} PDB: 3mf8_A 2flt_A 2flz_A
Probab=99.57 E-value=1.4e-14 Score=111.77 Aligned_cols=127 Identities=6% Similarity=0.032 Sum_probs=94.5
Q ss_pred CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeC--CeeEEecCC--CCceeEEEEEEeecCChHHHHHHHHHHHHHHHhh
Q psy2936 12 KEKIPANFGKETGALVAKTLGKPENYVAVIVVP--DVNLVFGGS--DAPAAIASLMSIGKLGTAENKKHSAVLFPHIEKT 87 (174)
Q Consensus 12 ~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~--~~~m~fgGs--~~P~a~veI~sig~~~~e~n~~~s~aI~~~l~e~ 87 (174)
+.+++++|..++++++++.+|.|++++.|.+++ ...++.||. ++...|+++....|++.+++++++++|++.+.+.
T Consensus 13 t~eqK~aLa~~It~a~~e~~~vP~~~v~Vif~e~~~~~~~~gG~~rsd~~v~I~i~~~~GRt~eqK~~L~~~I~~~l~~~ 92 (149)
T 3mf7_A 13 TPSAKHAVAKAITDAHRGLTGTQHFLAQVNFQEQPAGNVFLGGVQQGGDTIFVHGLHREGRSADLKGQLAQRIVDDVSVA 92 (149)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCTTCCCCEEEEEEECTTCCEETTEECCSCCEEEEEEEESCCCHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHCcChHHEEEEEEEcCccceEECCEEcCCCEEEEEEEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 667899999999999999999999999887754 567899885 4778999999999999999999999999999999
Q ss_pred hCCCCCcEEEEEEeCCCCCeeecCceecccccCccchHHHHHHHHHhhhcceeeee
Q psy2936 88 LGIPKDRMYISYIDSSTDVVGYNGTTFHEIFGGPVLNKRAMESIVLEFKNVLIKNQ 143 (174)
Q Consensus 88 LGIp~dRiyI~f~d~~~~nwG~~G~T~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (174)
+|+++++++|.+.++++.+|+.+|..+.+-=++.+|... ...|.+ -+|+++
T Consensus 93 ~g~~~edV~V~i~e~~~~~~~~~G~~~P~~G~e~~W~~~----~~~~~~-~~~~~~ 143 (149)
T 3mf7_A 93 AEIDRKHIWVYFGEMPAQQMVEYGRFLPQPGHEGEWFDN----LSSDER-AFMETN 143 (149)
T ss_dssp TTCCGGGEEEEEEEECGGGCCCSSCC------------------------------
T ss_pred cCCChhhEEEEEEEcCHHHHHhcCeeCCCCCChHHHHHh----CcHHHH-HHhhcc
Confidence 999999999999999999999999998877566666553 333545 445443
No 19
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=99.55 E-value=8e-15 Score=95.31 Aligned_cols=59 Identities=7% Similarity=0.174 Sum_probs=56.6
Q ss_pred EEEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCceeccc
Q psy2936 59 IASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFHEI 117 (174)
Q Consensus 59 ~veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~~~l 117 (174)
|++|+.++++++++|++++++|++.+.+.||+|++++||.|.+++++|||++|.+++++
T Consensus 2 ~i~i~~~~grs~eqk~~l~~~i~~~l~~~lg~~~~~v~V~i~e~~~~~w~~gG~~~~~~ 60 (61)
T 2opa_A 2 YVTVKMLEGRTDEQKRNLVEKVTEAVKETTGASEEKIVVFIEEMRKDHYAVAGKRLSDM 60 (61)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCCGGGCEEEEEEECGGGCEETTEEGGGC
T ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcCcCeEEEEEEEcCHHHeeECCEEhhhc
Confidence 67899999999999999999999999999999999999999999999999999999875
No 20
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=99.54 E-value=1.1e-14 Score=94.79 Aligned_cols=59 Identities=15% Similarity=0.230 Sum_probs=56.1
Q ss_pred EEEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCceeccc
Q psy2936 59 IASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFHEI 117 (174)
Q Consensus 59 ~veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~~~l 117 (174)
|++|+.+++++++++++++++|++.+.+.||+|++++||.|.++++++||++|.+++++
T Consensus 2 ~i~I~~~~grs~e~k~~l~~~i~~~l~~~lg~p~~~v~v~i~e~~~~~w~~~G~~~~~~ 60 (62)
T 1otf_A 2 IAQLYIIEGRTDEQKETLIRQVSEAMANSLDAPLERVRVLITEMPKNHFGIGGEPASKV 60 (62)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEEECGGGEEETTEETTC-
T ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcCcccEEEEEEEeCHHHeEECCEEHHHh
Confidence 67899999999999999999999999999999999999999999999999999999875
No 21
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=99.48 E-value=6.2e-14 Score=91.86 Aligned_cols=60 Identities=12% Similarity=0.168 Sum_probs=57.2
Q ss_pred eEEEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCceeccc
Q psy2936 58 AIASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFHEI 117 (174)
Q Consensus 58 a~veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~~~l 117 (174)
-|++|+..++++++++++++++|++.+.+.||+|++++||.|.|++++|||++|.++++.
T Consensus 2 P~i~i~~~~g~s~eqk~~l~~~lt~~l~~~lg~~~~~v~V~i~e~~~~~w~~gG~~~~~~ 61 (64)
T 3abf_A 2 VVLKVTLLEGRPPEKKRELVRRLTEMASRLLGEPYEEVRVILYEVRRDQWAAGGVLFSDK 61 (64)
T ss_dssp EEEEEEEETTCCHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEECGGGEEETTEEHHHH
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCCCcccEEEEEEEcCHHHeeECCEEhHhh
Confidence 478999999999999999999999999999999999999999999999999999999874
No 22
>1u9d_A Hypothetical protein VC0714; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics; 1.70A {Vibrio cholerae o1 biovar eltor str} SCOP: d.80.1.5
Probab=99.43 E-value=5.5e-13 Score=99.69 Aligned_cols=107 Identities=11% Similarity=0.150 Sum_probs=92.8
Q ss_pred CCeEEEEeCCCCCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCeeEEecCCCCceeEEEEEEeecCChHHHHHHHHHH
Q psy2936 1 MPVFRIETNIPKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKLGTAENKKHSAVL 80 (174)
Q Consensus 1 MP~i~i~TNv~~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~~m~fgGs~~P~a~veI~sig~~~~e~n~~~s~aI 80 (174)
||+|++.- + +.+..+.+.+.+.+-+|++++.|.+++.+.+.+... ++.| +..-+++|.-+ ++++|++++++++|
T Consensus 16 MPhlr~rg-i-~~e~v~~lS~~Lid~La~i~~~~~e~fTle~i~s~~-i~~G--~~MP~VeV~~f-gRt~EqK~~la~~I 89 (122)
T 1u9d_A 16 MPHLRFRA-V-EAHIVESLVPTLLNELSSLLSTARNAFTFELINTQY-FAEG--GVYPMVEVLWF-GREQQTQDQIAQVI 89 (122)
T ss_dssp CCEEEEES-S-CHHHHHHHHHHHHHHHHHHHTCCGGGCEEEECCCCC-CCTT--CCCCEEEEEES-CCCHHHHHHHHHHH
T ss_pred CceEEECC-C-CHHHHHHHhHHHHHHHHHHHCCCcccEEEEEeeeEE-EecC--CCCCEEEEEEc-CCCHHHHHHHHHHH
Confidence 99999931 1 345568899999999999999999999998877655 4666 55668899999 59999999999999
Q ss_pred HHHHHhhhCCCCCcEEEEEEeCCCCCeeecCcee
Q psy2936 81 FPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114 (174)
Q Consensus 81 ~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~ 114 (174)
++.+.+. |.++++|.|.|.++++++|+.||..|
T Consensus 90 T~av~~~-~~~~e~V~Vif~el~~~~y~~gG~~~ 122 (122)
T 1u9d_A 90 TDQIRQL-LGADSHLAVVFIPLQRTAYYLDGQHF 122 (122)
T ss_dssp HHHHHHH-HCTTCCCEEEEEECCGGGCEETTEEC
T ss_pred HHHHHHh-CCCCceEEEEEEecCHHHeeeCCEEC
Confidence 9999999 89999999999999999999999754
No 23
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=99.43 E-value=2.3e-13 Score=88.21 Aligned_cols=60 Identities=13% Similarity=0.160 Sum_probs=56.9
Q ss_pred eeEEEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCceecc
Q psy2936 57 AAIASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFHE 116 (174)
Q Consensus 57 ~a~veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~~~ 116 (174)
+-+++|+..++++++++++++++|++.+.+.||+|++++||.|.++++++||++|.++++
T Consensus 3 MP~i~i~~~~g~s~e~k~~l~~~l~~~l~~~lg~p~~~v~v~i~e~~~~~~~~~G~~~~~ 62 (63)
T 2x4k_A 3 MPIVNVKLLEGRSDEQLKNLVSEVTDAVEKTTGANRQAIHVVIEEMKPNHYGVAGVRKSD 62 (63)
T ss_dssp CCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCCGGGCEEEEEEECGGGCEETTEETTC
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcCcccEEEEEEEcCHHHeeECCEEcCc
Confidence 457899999999999999999999999999999999999999999999999999999875
No 24
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=99.43 E-value=3.5e-13 Score=89.83 Aligned_cols=59 Identities=10% Similarity=0.148 Sum_probs=56.6
Q ss_pred EEEEEEee---cCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCceeccc
Q psy2936 59 IASLMSIG---KLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFHEI 117 (174)
Q Consensus 59 ~veI~sig---~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~~~l 117 (174)
|++|+.++ +++++++++++++|++.+.+.||+|++++||.|.++++++||++|.++.++
T Consensus 2 ~i~I~~~~~~~grs~eqK~~l~~~lt~~l~~~lg~p~~~v~V~i~e~~~~~w~~gG~~~~e~ 63 (67)
T 3m21_A 2 FINIKLVPENGGPTNEQKQQLIEGVSDLMVKVLNKNKASIVVIIDEVDSNNYGLGGESVHHL 63 (67)
T ss_dssp EEEEEECCBTTBSCHHHHHHHHHHHHHHHHHHHCCCGGGCEEEEEECCTTTEEETTEEHHHH
T ss_pred EEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHCcCcccEEEEEEEeCHHHeEECCEEHHHH
Confidence 67899997 899999999999999999999999999999999999999999999999876
No 25
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=99.39 E-value=7.5e-13 Score=87.09 Aligned_cols=58 Identities=14% Similarity=0.240 Sum_probs=55.0
Q ss_pred EEEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCceeccc
Q psy2936 59 IASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFHEI 117 (174)
Q Consensus 59 ~veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~~~l 117 (174)
+++|+. +++++|++++++++|++.+.+.||+|+++++|.|.+++++|||++|.++.++
T Consensus 2 ~I~I~~-~grt~eqK~~L~~~it~~~~~~lg~~~~~v~V~i~E~~~~~w~~gG~~~~~~ 59 (62)
T 3m20_A 2 VLIVYG-PKLDVGKKREFVERLTSVAAEIYGMDRSAITILIHEPPAENVGVGGKLIADR 59 (62)
T ss_dssp EEEEEC-SCCCHHHHHHHHHHHHHHHHHHHTCCTTSCEEEEECCCGGGEEETTEETTCC
T ss_pred EEEEEE-CCCCHHHHHHHHHHHHHHHHHHhCcCcceEEEEEEEeCHHHeEECCEEhhhh
Confidence 578888 8999999999999999999999999999999999999999999999998775
No 26
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=99.39 E-value=8.1e-13 Score=89.30 Aligned_cols=59 Identities=8% Similarity=0.146 Sum_probs=56.9
Q ss_pred EEEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCceeccc
Q psy2936 59 IASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFHEI 117 (174)
Q Consensus 59 ~veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~~~l 117 (174)
+++|+...++++|++++++++|++.+.+.||+|++++||.|.+++++|||++|.++.++
T Consensus 3 ~I~I~~~~grs~eqK~~L~~~it~~l~~~lg~p~~~v~V~i~e~~~~~w~~gG~~~~e~ 61 (72)
T 3mb2_A 3 LLRITMLEGRSTEQKAELARALSAAAAAAFDVPLAEVRLIIQEVPPTHWTVGGISMAEL 61 (72)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECGGGEEETTEETTCC
T ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCCCcccEEEEEEEcCHHHeeECCEEHHHH
Confidence 67888888999999999999999999999999999999999999999999999999987
No 27
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=99.37 E-value=7.4e-13 Score=87.62 Aligned_cols=59 Identities=14% Similarity=0.139 Sum_probs=56.4
Q ss_pred EEEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCceeccc
Q psy2936 59 IASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFHEI 117 (174)
Q Consensus 59 ~veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~~~l 117 (174)
+++|+...|++++++++++++|++.+.+.||+|++++||.|.+++++|||++|.++.+.
T Consensus 2 ~i~I~~~~Grs~eqk~~L~~~it~~~~~~lg~p~~~v~V~i~e~~~~~w~~gG~~~~e~ 60 (65)
T 3ry0_A 2 LIRVTLLEGRSPQEVAALGEALTAAAHETLGTPVEAVRVIVEETPPERWFVGGRSVAER 60 (65)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCCGGGCEEEEEEECGGGCEETTEEHHHH
T ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcCcccEEEEEEEcCHHHeeECCEEHHHh
Confidence 57888889999999999999999999999999999999999999999999999998876
No 28
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=99.33 E-value=2.6e-12 Score=88.06 Aligned_cols=59 Identities=15% Similarity=0.140 Sum_probs=56.8
Q ss_pred EEEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCceeccc
Q psy2936 59 IASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFHEI 117 (174)
Q Consensus 59 ~veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~~~l 117 (174)
+++|+...|++.|++++++++|++.+.+.||+|+++++|.|++++++|||++|.++.+.
T Consensus 3 ~I~I~~~~Grs~eqK~~L~~~it~~l~~~lg~p~~~v~V~i~E~~~~~w~~gG~~~~e~ 61 (76)
T 3ej9_A 3 MISCDMRYGRTDEQKRALSAGLLRVISEATGEPRENIFFVIREGSGINFVQHGEHLPDY 61 (76)
T ss_dssp EEEEEEETTCCHHHHHHHHHHHHHHHHHHHCCCGGGCEEEEEEECGGGEEETTEECCCC
T ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHHHHCcCcccEEEEEEEeCHHHeEECCEEcccc
Confidence 67888888999999999999999999999999999999999999999999999999886
No 29
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=98.99 E-value=4.6e-10 Score=76.41 Aligned_cols=51 Identities=8% Similarity=0.016 Sum_probs=48.5
Q ss_pred EEEEEEeecC-ChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeee
Q psy2936 59 IASLMSIGKL-GTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGY 109 (174)
Q Consensus 59 ~veI~sig~~-~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~ 109 (174)
+++|+...|+ +++++++++++|++.+.+.||+|++++||.|.++++++||+
T Consensus 2 ~I~I~l~~Grls~eqk~~L~~~l~~~l~~~lgip~~~v~V~i~e~~~~~w~~ 53 (76)
T 1gyx_A 2 HIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIALQQIQPESWQA 53 (76)
T ss_dssp EEEEEESCCCCCHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEECCGGGHHH
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHHHhCcCCceEEEEEEEeChHHEEE
Confidence 5788888787 99999999999999999999999999999999999999998
No 30
>3abf_A 4-oxalocrotonate tautomerase; isomerase; 1.94A {Thermus thermophilus}
Probab=98.97 E-value=4.1e-10 Score=73.36 Aligned_cols=54 Identities=19% Similarity=0.211 Sum_probs=49.1
Q ss_pred CCeEEEEeCCC-CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCe--eEEecCCC
Q psy2936 1 MPVFRIETNIP-KEKIPANFGKETGALVAKTLGKPENYVAVIVVPDV--NLVFGGSD 54 (174)
Q Consensus 1 MP~i~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~--~m~fgGs~ 54 (174)
||+|+|+++.+ +.+++++|.+++++++++.+|+|+++++|.+++.. +|.|||..
T Consensus 1 MP~i~i~~~~g~s~eqk~~l~~~lt~~l~~~lg~~~~~v~V~i~e~~~~~w~~gG~~ 57 (64)
T 3abf_A 1 MVVLKVTLLEGRPPEKKRELVRRLTEMASRLLGEPYEEVRVILYEVRRDQWAAGGVL 57 (64)
T ss_dssp CEEEEEEEETTCCHHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEECGGGEEETTEE
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCCCcccEEEEEEEcCHHHeeECCEE
Confidence 99999999988 66779999999999999999999999999998765 59999964
No 31
>3e6q_A Putative 5-carboxymethyl-2-hydroxymuconate isomer; structural genomics, APC7683, isomerase, PSI-2, protein STRU initiative; HET: GOL IMD; 1.75A {Pseudomonas aeruginosa}
Probab=98.97 E-value=6.8e-09 Score=79.62 Aligned_cols=110 Identities=13% Similarity=0.048 Sum_probs=93.6
Q ss_pred CCeEEEEeCCC-C-CCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCeeEEecCCC--CceeEEEEEEeecCChHHHHHH
Q psy2936 1 MPVFRIETNIP-K-EKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSD--APAAIASLMSIGKLGTAENKKH 76 (174)
Q Consensus 1 MP~i~i~TNv~-~-~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~~m~fgGs~--~P~a~veI~sig~~~~e~n~~~ 76 (174)
||.+.|.=+.. . ....++|+..+.+++.+...-|+.-|-+...+...+..|+.. +...+++|+...|++.|+++++
T Consensus 22 MPHi~IEYS~nl~~~~d~~~l~~~vh~al~~~g~fp~~diK~Ra~~~~~y~vg~~~~~~~FVhV~i~ll~GRt~EqK~~L 101 (146)
T 3e6q_A 22 MPHLVIEATANLRLETSPGELLEQANAALFASGQFGEADIKSRFVTLEAYRQGTAAVERAYLHACLSILDGRDAATRQAL 101 (146)
T ss_dssp CCEEEEEEETTCEESSCHHHHHHHHHHHHHHTTSSCGGGCEEEEEEESSEEESSSSCCCCEEEEEEEEETTCCHHHHHHH
T ss_pred CCeEEEEECCCcccccCHHHHHHHHHHHHHhcCCCCccCeeEEEEEccceEEcCCCCCccEEEEEEEECCCCCHHHHHHH
Confidence 99998876555 2 444679999999999998778999999988887788888643 5677777778999999999999
Q ss_pred HHHHHHHHHhhhCCCC---CcEEEEEEeCCCCCeeec
Q psy2936 77 SAVLFPHIEKTLGIPK---DRMYISYIDSSTDVVGYN 110 (174)
Q Consensus 77 s~aI~~~l~e~LGIp~---dRiyI~f~d~~~~nwG~~ 110 (174)
+++|++.+.+.|+-++ ..+.|.+.|+++++|+.+
T Consensus 102 ~e~v~~al~~~l~~~~~~~~~lsVeI~E~~~~~y~k~ 138 (146)
T 3e6q_A 102 GESLCEVLAGAVAGGGEEGVQVSVEVREMERASYAKR 138 (146)
T ss_dssp HHHHHHHHHHHEEECSSSCEEEEEEEEEECGGGCEEE
T ss_pred HHHHHHHHHHHhCCccCCceEEEEEEEECCcccccee
Confidence 9999999999999876 599999999999999976
No 32
>3ej9_B Beta-subunit of trans-3-chloroacrylic acid dehalo; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej7_B 3ej3_B 1s0y_B
Probab=98.88 E-value=4e-09 Score=70.78 Aligned_cols=58 Identities=10% Similarity=0.131 Sum_probs=54.0
Q ss_pred EEEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCceecc
Q psy2936 59 IASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFHE 116 (174)
Q Consensus 59 ~veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~~~ 116 (174)
++++..+.|++.|||+++.+++++.+.+.||.|++.|.|.++|++.+|||.+|..-++
T Consensus 2 i~qi~i~EGRT~EQK~~lI~~VT~a~~eslgap~esVrVlItE~p~en~gi~G~~~~~ 59 (70)
T 3ej9_B 2 FIECHIATGLSVARKQQLIRDVIDVTNKSIGSDPKIINVLLVEHAEANMSISGRIHGE 59 (70)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCCGGGCEEEEEEECGGGEESTTCCTTC
T ss_pred eeEEEEecCCCHHHHHHHHHHHHHHHHHHcCCChHHEEEEeeeCChhhceeeeeEccc
Confidence 4688899999999999999999999999999999999999999999999999975443
No 33
>1otg_A 5-carboxymethyl-2-hydroxymuconate isomerase; 2.10A {Escherichia coli} SCOP: d.80.1.2
Probab=98.86 E-value=1.6e-08 Score=75.23 Aligned_cols=110 Identities=12% Similarity=-0.022 Sum_probs=90.8
Q ss_pred CeEEEEeCCC--CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCeeEEecCCCC--ceeEEEEEEeecCChHHHHHHH
Q psy2936 2 PVFRIETNIP--KEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDA--PAAIASLMSIGKLGTAENKKHS 77 (174)
Q Consensus 2 P~i~i~TNv~--~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~~m~fgGs~~--P~a~veI~sig~~~~e~n~~~s 77 (174)
|.+.|.-... .....++|+..+.+++.+...-|+.-+-+...+-..+..|+..+ ...+++|+...|++.|++++++
T Consensus 1 PH~~ieyS~nl~~~~~~~~L~~~lh~~l~~~~~fp~~~ik~Ra~~~~~~~vg~~~~~~~fvhi~i~i~~GRs~eqK~~L~ 80 (125)
T 1otg_A 1 PHFIVECSDNIREEADLPGLFAKVNPTLAATGIFPLAGIRSRVHWVDTWQMADGQHDYAFVHMTLKIGAGRSLESRQQAG 80 (125)
T ss_dssp CEEEEEEEGGGHHHHTHHHHHHHHHHHHHTTSSSCGGGCEEEEEEESSEEETTSCSCEEEEEEEEEECTTCCHHHHHHHH
T ss_pred CeEEEEeCCCcccccCHHHHHHHHHHHHHHcCCCCCcCceEeeEEcccEEEcCCCCCcceEEEEEEECCCCCHHHHHHHH
Confidence 5555554333 22346899999999999999999999998888777878785443 4677888888899999999999
Q ss_pred HHHHHHHHhhh----CCCCCcEEEEEEeCCCC-CeeecC
Q psy2936 78 AVLFPHIEKTL----GIPKDRMYISYIDSSTD-VVGYNG 111 (174)
Q Consensus 78 ~aI~~~l~e~L----GIp~dRiyI~f~d~~~~-nwG~~G 111 (174)
++|++.+.+.| |.++..+.|.+.|++++ +|+.+-
T Consensus 81 ~~v~~~l~~~l~~~~~~~~~~vsv~i~E~~~~~~~~~~~ 119 (125)
T 1otg_A 81 EMLFELIKTHFAALMESRLLALSFEIEELHPTLNFKQNN 119 (125)
T ss_dssp HHHHHHHHHHTHHHHTTSEEEEEEEEEECCSSSEEEEEG
T ss_pred HHHHHHHHHHhhhhcCCCceEEEEEEEEcCCccCHHHhh
Confidence 99999999997 66999999999999999 998753
No 34
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=98.72 E-value=9.2e-09 Score=66.11 Aligned_cols=54 Identities=19% Similarity=0.213 Sum_probs=48.3
Q ss_pred CCeEEEEeCCC-CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCC--eeEEecCCC
Q psy2936 1 MPVFRIETNIP-KEKIPANFGKETGALVAKTLGKPENYVAVIVVPD--VNLVFGGSD 54 (174)
Q Consensus 1 MP~i~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~--~~m~fgGs~ 54 (174)
||+++|+++.+ +.+++++|.+++++++++.+|+|+++++|.+++. ..|.+||..
T Consensus 3 MP~i~i~~~~g~s~e~k~~l~~~l~~~l~~~lg~p~~~v~v~i~e~~~~~~~~~G~~ 59 (63)
T 2x4k_A 3 MPIVNVKLLEGRSDEQLKNLVSEVTDAVEKTTGANRQAIHVVIEEMKPNHYGVAGVR 59 (63)
T ss_dssp CCEEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCCGGGCEEEEEEECGGGCEETTEE
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcCcccEEEEEEEcCHHHeeECCEE
Confidence 99999999988 6677899999999999999999999999988754 588999864
No 35
>3mb2_A 4-oxalocrotonate tautomerase family enzyme - ALPH; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=98.59 E-value=4.7e-08 Score=65.57 Aligned_cols=54 Identities=20% Similarity=0.251 Sum_probs=48.7
Q ss_pred CCeEEEEeCCC-CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeC--CeeEEecCCC
Q psy2936 1 MPVFRIETNIP-KEKIPANFGKETGALVAKTLGKPENYVAVIVVP--DVNLVFGGSD 54 (174)
Q Consensus 1 MP~i~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~--~~~m~fgGs~ 54 (174)
||+|+|++... +.+++++|.+++++++++.+|+|++.++|.+++ ..+|.+||..
T Consensus 1 MP~I~I~~~~grs~eqK~~L~~~it~~l~~~lg~p~~~v~V~i~e~~~~~w~~gG~~ 57 (72)
T 3mb2_A 1 MLLLRITMLEGRSTEQKAELARALSAAAAAAFDVPLAEVRLIIQEVPPTHWTVGGIS 57 (72)
T ss_dssp CEEEEEEEESCCCHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEEEECGGGEEETTEE
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCCCcccEEEEEEEcCHHHeeECCEE
Confidence 99999999877 678899999999999999999999999988875 5699999964
No 36
>3ej9_A Alpha-subunit of trans-3-chloroacrylic acid dehal; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej3_A 1s0y_A 3ej7_A
Probab=98.29 E-value=6e-07 Score=61.00 Aligned_cols=54 Identities=13% Similarity=0.321 Sum_probs=46.5
Q ss_pred CCeEEEEeCCC-CCCchhhHHHHHHHHHHHHhCCCcceEEEEEe--CCeeEEecCCC
Q psy2936 1 MPVFRIETNIP-KEKIPANFGKETGALVAKTLGKPENYVAVIVV--PDVNLVFGGSD 54 (174)
Q Consensus 1 MP~i~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~--~~~~m~fgGs~ 54 (174)
||+++|+...+ +.+++++|...+++++++.+|.|.+.+.|.++ +..+|.+||..
T Consensus 1 MP~I~I~~~~Grs~eqK~~L~~~it~~l~~~lg~p~~~v~V~i~E~~~~~w~~gG~~ 57 (76)
T 3ej9_A 1 MPMISCDMRYGRTDEQKRALSAGLLRVISEATGEPRENIFFVIREGSGINFVQHGEH 57 (76)
T ss_dssp -CEEEEEEETTCCHHHHHHHHHHHHHHHHHHHCCCGGGCEEEEEEECGGGEEETTEE
T ss_pred CCEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHCcCcccEEEEEEEeCHHHeEECCEE
Confidence 99999999876 77889999999999999999999998877775 45799999963
No 37
>3n4h_A Putative tautomerase; CG10062, CIS-3-chloroacrylic acid dehalogenase, tautomerase superfamily, beta-alpha-beta motif, hydrolase; HET: PR7; 2.02A {Corynebacterium glutamicum} PDB: 3n4d_A* 3n4g_A
Probab=98.26 E-value=1.8e-06 Score=65.30 Aligned_cols=58 Identities=9% Similarity=0.003 Sum_probs=52.4
Q ss_pred EEEEEEeecC-ChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCceecc
Q psy2936 59 IASLMSIGKL-GTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFHE 116 (174)
Q Consensus 59 ~veI~sig~~-~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~~~ 116 (174)
..+|+...+. +++++++++++|++.+.+.+|+|++.++|.|.++++++|+++|....+
T Consensus 2 ~~~I~~~~g~~s~e~k~~L~~~it~al~~~lg~p~~~v~V~i~e~~~~~~~~gG~~~s~ 60 (148)
T 3n4h_A 2 TYTCWSQRIRISREAKQRIAEAITDAHHELAHAPKYLVQVIFNEVEPDSYFIAAQSASE 60 (148)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEEECGGGCEETTEECCT
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHHHHHHCcCcccEEEEEEEEChHHeEECCEEccC
Confidence 4577777776 999999999999999999999999999999999999999999976543
No 38
>2aal_A Malonate semialdehyde decarboxylase; tautomerase superfamily, beta-alpha-beta, homotrimeric, LYAS; 1.65A {Pseudomonas pavonaceae} SCOP: d.80.1.6 PDB: 2aag_A 2aaj_A
Probab=98.19 E-value=5.1e-06 Score=61.43 Aligned_cols=53 Identities=9% Similarity=0.073 Sum_probs=49.8
Q ss_pred EEEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecC
Q psy2936 59 IASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNG 111 (174)
Q Consensus 59 ~veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G 111 (174)
++.|....++++++++++++++++.+.+.+|.|++.+|+.|.++++++|+++|
T Consensus 3 ~i~I~~~~~~~~e~k~~l~~~i~~al~~~~g~p~~~~~v~i~~~~~~~~~~~g 55 (131)
T 2aal_A 3 LLKFDLFYGRTDAQIKSLLDAAHGAMVDAFGVPANDRYQTVSQHRPGEMVLED 55 (131)
T ss_dssp EEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCCTTCCEEEEEEECTTSEEECC
T ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcChhHEEEEEEEECHHHcccCC
Confidence 46777777899999999999999999999999999999999999999999998
No 39
>3mlc_A FG41 malonate semialdehyde decarboxylase; tautomerase superfamily, malonate semialdehyde decarboxylase alpha-beta-motif; 2.22A {Coryneform bacterium} SCOP: d.80.1.0 PDB: 3mjz_A
Probab=98.16 E-value=3.6e-06 Score=63.25 Aligned_cols=53 Identities=6% Similarity=0.080 Sum_probs=49.5
Q ss_pred EEEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecC
Q psy2936 59 IASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNG 111 (174)
Q Consensus 59 ~veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G 111 (174)
+++|....|++++++++++++|++.+.+.+|+|++++++.|+++++++|.+++
T Consensus 2 ~v~I~l~~Grs~e~k~~L~~~it~al~e~~~vP~~dv~vii~e~~~~~~~~~~ 54 (136)
T 3mlc_A 2 LIRIDLTSDRSREQRRAIADAVHDALVEVLAIPARDRFQILTAHDPSDIIAED 54 (136)
T ss_dssp EEEEEEETTSCSHHHHHHHHHHHHHHHHHHCCCTTCCEEEEEEECGGGEEECC
T ss_pred EEEEEEeCCCCHHHHHHHHHHHHHHHHHHhCcChhHEEEEEEEcCHHHccccc
Confidence 46788888899999999999999999999999999999999999999997664
No 40
>3m20_A 4-oxalocrotonate tautomerase, putative; DMPI, thermophIle, beta-alpha-beta, catalytic proline, isomerase; 2.37A {Archaeoglobus fulgidus}
Probab=98.14 E-value=3.6e-06 Score=54.65 Aligned_cols=52 Identities=15% Similarity=0.217 Sum_probs=46.4
Q ss_pred CeEEEEeCCC-CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCC--eeEEecCCC
Q psy2936 2 PVFRIETNIP-KEKIPANFGKETGALVAKTLGKPENYVAVIVVPD--VNLVFGGSD 54 (174)
Q Consensus 2 P~i~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~--~~m~fgGs~ 54 (174)
|+|+|+. -+ +.+++++|.+++++++++.+|+|.+.++|.+++. .+|.+||..
T Consensus 1 P~I~I~~-~grt~eqK~~L~~~it~~~~~~lg~~~~~v~V~i~E~~~~~w~~gG~~ 55 (62)
T 3m20_A 1 PVLIVYG-PKLDVGKKREFVERLTSVAAEIYGMDRSAITILIHEPPAENVGVGGKL 55 (62)
T ss_dssp CEEEEEC-SCCCHHHHHHHHHHHHHHHHHHHTCCTTSCEEEEECCCGGGEEETTEE
T ss_pred CEEEEEE-CCCCHHHHHHHHHHHHHHHHHHhCcCcceEEEEEEEeCHHHeEECCEE
Confidence 8999999 55 7788999999999999999999999999988765 589999953
No 41
>3c6v_A Probable tautomerase/dehalogenase AU4130; aspergillus fumigatus trimeric thermophilic probable tautomerase/dehalogenase; HET: MSE; 1.90A {Aspergillus fumigatus AF293}
Probab=98.13 E-value=6.2e-06 Score=63.85 Aligned_cols=60 Identities=8% Similarity=0.045 Sum_probs=54.6
Q ss_pred CceeEEEEEEeecC-ChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCceec
Q psy2936 55 APAAIASLMSIGKL-GTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFH 115 (174)
Q Consensus 55 ~P~a~veI~sig~~-~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~~ 115 (174)
..+-+++|..+.+. ++|++++++++|++.+.+. |+|++.+.|.|+++++++|+.+|....
T Consensus 20 ~~MP~v~I~~~~G~~t~eqk~~L~~~It~alve~-g~P~~~v~V~i~e~~~~~~~~gg~~~~ 80 (161)
T 3c6v_A 20 QGMPRWLIQHSPNTLTPEEKSHLAQQITQAYVGF-GLPAFYVQVHFIEQPAGTSFIGGEQHP 80 (161)
T ss_dssp CSCCEEEEEECTTSSCHHHHHHHHHHHHHHHHHT-TCCGGGCEEEEEECCTTSEEETTEECS
T ss_pred CCCCEEEEEEcCCCCCHHHHHHHHHHHHHHHHHh-CcChhhEEEEEEEeCccceeECCcccC
Confidence 34778888888875 9999999999999999999 999999999999999999999998754
No 42
>3mb2_B 4-oxalocrotonate tautomerase family enzyme - beta; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=98.04 E-value=1.4e-05 Score=53.72 Aligned_cols=47 Identities=13% Similarity=0.182 Sum_probs=41.7
Q ss_pred EEEEEeec--CChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCC
Q psy2936 60 ASLMSIGK--LGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDV 106 (174)
Q Consensus 60 veI~sig~--~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~n 106 (174)
+++...|. ++.|||+++++++++.+++.||-++++++|.|.+++++|
T Consensus 3 lev~~~~~~pRT~EQKralaeE~T~if~evLGcpPgsV~IVi~EV~~en 51 (72)
T 3mb2_B 3 LEVFYSGDRPPDRTRKQAFAAEASAIFQRVIGTPPGRLQLIIQIVSPEN 51 (72)
T ss_dssp EEEEECCSSCCCHHHHHHHHHHHHHHHHHHHCCCTTCCEEEEEECCGGG
T ss_pred eEEEecCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEecCccc
Confidence 45555554 789999999999999999999999999999999998876
No 43
>3mf7_A CIS-3-chloroacrylic acid dehalogenase; beta-alpha-beta motif, tautomerase, CIS-3-CHLO acid dehalogenase, isomerase, hydrolase; HET: PR4; 1.65A {Coryneform bacterium} PDB: 3mf8_A 2flt_A 2flz_A
Probab=97.99 E-value=8.5e-06 Score=62.33 Aligned_cols=50 Identities=8% Similarity=0.051 Sum_probs=46.4
Q ss_pred eecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCcee
Q psy2936 65 IGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTF 114 (174)
Q Consensus 65 ig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~ 114 (174)
-|.++++++++++++|++.+.+.+|+|+++++|.|+++++++|+.+|..-
T Consensus 9 ~~~~t~eqK~aLa~~It~a~~e~~~vP~~~v~Vif~e~~~~~~~~gG~~r 58 (149)
T 3mf7_A 9 QDRLTPSAKHAVAKAITDAHRGLTGTQHFLAQVNFQEQPAGNVFLGGVQQ 58 (149)
T ss_dssp TTTSCHHHHHHHHHHHHHHHHHTCCTTCCCCEEEEEEECTTCCEETTEEC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCcChHHEEEEEEEcCccceEECCEEc
Confidence 36699999999999999999999999999999999999999999987754
No 44
>3m21_A Probable tautomerase HP_0924; 4-oxalocrotonate tautomerase, catalytic proline, hexamer, BE beta, isomerase; 1.90A {Helicobacter pylori} PDB: 2orm_A
Probab=97.94 E-value=1.1e-05 Score=53.01 Aligned_cols=53 Identities=21% Similarity=0.280 Sum_probs=46.4
Q ss_pred CeEEEEeCC---C-CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeC--CeeEEecCCC
Q psy2936 2 PVFRIETNI---P-KEKIPANFGKETGALVAKTLGKPENYVAVIVVP--DVNLVFGGSD 54 (174)
Q Consensus 2 P~i~i~TNv---~-~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~--~~~m~fgGs~ 54 (174)
|+++|+.-. . +.+++++|.+++++++++.+|+|.+.++|.+++ ..+|.+||..
T Consensus 1 P~i~I~~~~~~~grs~eqK~~l~~~lt~~l~~~lg~p~~~v~V~i~e~~~~~w~~gG~~ 59 (67)
T 3m21_A 1 PFINIKLVPENGGPTNEQKQQLIEGVSDLMVKVLNKNKASIVVIIDEVDSNNYGLGGES 59 (67)
T ss_dssp CEEEEEECCBTTBSCHHHHHHHHHHHHHHHHHHHCCCGGGCEEEEEECCTTTEEETTEE
T ss_pred CEEEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHCcCcccEEEEEEEeCHHHeEECCEE
Confidence 899999987 6 778899999999999999999999988887765 4689999853
No 45
>1mww_A Hypothetical protein HI1388.1; structural genomics, structure 2 function project, S2F, unknown function; HET: GLU; 2.08A {Haemophilus influenzae} SCOP: d.80.1.4
Probab=97.88 E-value=9.5e-06 Score=59.64 Aligned_cols=52 Identities=15% Similarity=0.243 Sum_probs=49.5
Q ss_pred EEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecC
Q psy2936 60 ASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNG 111 (174)
Q Consensus 60 veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G 111 (174)
++|....++++++++++.+++++.+.+.+|.|++++|+.+.+.++++|.++|
T Consensus 2 v~I~~~~g~s~e~~~~l~~~i~~al~~~lg~p~~~~~v~i~~~~~~~~~~gg 53 (128)
T 1mww_A 2 ITVFGLKSKLAPRREKLAEVIYNSLHLGLDIPKGKHAIRFLCLEKEDFYYPF 53 (128)
T ss_dssp EEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCTTSSCEEEEEECGGGEECCT
T ss_pred EEEEEeCCCCHHHHHHHHHHHHHHHHHHHCcChHHEEEEEEEeChHHeecCC
Confidence 5677788899999999999999999999999999999999999999999998
No 46
>3ry0_A Putative tautomerase; oxalocrotonate tautomerase family, isomerase; 1.40A {Streptomyces achromogenes}
Probab=97.82 E-value=1.5e-05 Score=51.93 Aligned_cols=53 Identities=30% Similarity=0.409 Sum_probs=46.0
Q ss_pred CeEEEEeCCC-CCCchhhHHHHHHHHHHHHhCCCcceEEEEEe--CCeeEEecCCC
Q psy2936 2 PVFRIETNIP-KEKIPANFGKETGALVAKTLGKPENYVAVIVV--PDVNLVFGGSD 54 (174)
Q Consensus 2 P~i~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~--~~~~m~fgGs~ 54 (174)
|+++|+.-.+ +.+++++|.+++++++++.+|+|.+.+.|.++ +..+|.+||..
T Consensus 1 P~i~I~~~~Grs~eqk~~L~~~it~~~~~~lg~p~~~v~V~i~e~~~~~w~~gG~~ 56 (65)
T 3ry0_A 1 PLIRVTLLEGRSPQEVAALGEALTAAAHETLGTPVEAVRVIVEETPPERWFVGGRS 56 (65)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCCGGGCEEEEEEECGGGCEETTEE
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcCcccEEEEEEEcCHHHeeECCEE
Confidence 8999999877 67889999999999999999999998877775 45789999963
No 47
>2opa_A Probable tautomerase YWHB; homohexamer, 4-oxalocrotonate tautomerase, inhibitor, 2-FLUO hydroxycinnamate, isomerase; HET: FHC; 2.40A {Bacillus subtilis} PDB: 2op8_A*
Probab=97.82 E-value=1.6e-05 Score=50.64 Aligned_cols=53 Identities=15% Similarity=0.221 Sum_probs=45.6
Q ss_pred CeEEEEeCCC-CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeC--CeeEEecCCC
Q psy2936 2 PVFRIETNIP-KEKIPANFGKETGALVAKTLGKPENYVAVIVVP--DVNLVFGGSD 54 (174)
Q Consensus 2 P~i~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~--~~~m~fgGs~ 54 (174)
|+++|+...+ +.+++++|.+++++++++.+|.|.+.+.|.+.+ ..+|.+||..
T Consensus 1 P~i~i~~~~grs~eqk~~l~~~i~~~l~~~lg~~~~~v~V~i~e~~~~~w~~gG~~ 56 (61)
T 2opa_A 1 PYVTVKMLEGRTDEQKRNLVEKVTEAVKETTGASEEKIVVFIEEMRKDHYAVAGKR 56 (61)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCCGGGCEEEEEEECGGGCEETTEE
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcCcCeEEEEEEEcCHHHeeECCEE
Confidence 8999997666 678899999999999999999999988888764 4589999853
No 48
>1otf_A 4-oxalocrotonate tautomerase; isomerase; 1.90A {Pseudomonas SP} SCOP: d.80.1.1 PDB: 4otc_A 4ota_A 4otb_A 1bjp_A 2fm7_A
Probab=97.75 E-value=2.8e-05 Score=49.52 Aligned_cols=53 Identities=15% Similarity=0.271 Sum_probs=45.3
Q ss_pred CeEEEEeCCC-CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeC--CeeEEecCCC
Q psy2936 2 PVFRIETNIP-KEKIPANFGKETGALVAKTLGKPENYVAVIVVP--DVNLVFGGSD 54 (174)
Q Consensus 2 P~i~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~--~~~m~fgGs~ 54 (174)
|+++|+.-.. +.+++++|.+++++++++.+|.|.+.+.|.+.+ ..+|.+||..
T Consensus 1 P~i~I~~~~grs~e~k~~l~~~i~~~l~~~lg~p~~~v~v~i~e~~~~~w~~~G~~ 56 (62)
T 1otf_A 1 PIAQLYIIEGRTDEQKETLIRQVSEAMANSLDAPLERVRVLITEMPKNHFGIGGEP 56 (62)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEEECGGGEEETTEE
T ss_pred CEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcCcccEEEEEEEeCHHHeEECCEE
Confidence 8999987655 678899999999999999999999988887754 4589999854
No 49
>2wkb_A Macrophage migration inhibitory factor; cytokine; HET: CME; 1.78A {Plasmodium berghei} PDB: 3gad_A 3gac_A 2wkf_A*
Probab=97.35 E-value=0.00037 Score=50.98 Aligned_cols=54 Identities=13% Similarity=0.088 Sum_probs=43.4
Q ss_pred CCeEEEEeCCC-CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCe--eEEecCCC
Q psy2936 1 MPVFRIETNIP-KEKIPANFGKETGALVAKTLGKPENYVAVIVVPDV--NLVFGGSD 54 (174)
Q Consensus 1 MP~i~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~--~m~fgGs~ 54 (174)
||+++|+.... +.+++++|.+++++++++.+|.|.+.+.|.+.+.. +|.|||..
T Consensus 57 ~~~v~I~~~~g~t~eqk~~l~~~i~~~l~~~lgi~~~~v~I~~~e~~~~~wg~~G~~ 113 (125)
T 2wkb_A 57 YCFVRLTSIGGINRSNNSLLADKITKILSNHLSVKPRRVYIEFRDCSAQNFAFSGSL 113 (125)
T ss_dssp CEEEEEECC-----CTHHHHHHHHHHHHHHHHCCCGGGEEEEEEC----CEEEEGGG
T ss_pred cEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhCcCcceEEEEEEECCHHHeEECCEE
Confidence 67889987655 67889999999999999999999999999997754 89999864
No 50
>2xcz_A Possible ATLS1-like light-inducible protein; cytokine, tautomerase, immune system, cyanobacterium; 1.64A {Prochlorococcus marinus}
Probab=97.23 E-value=0.00064 Score=48.69 Aligned_cols=52 Identities=13% Similarity=0.127 Sum_probs=46.1
Q ss_pred EEEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCce
Q psy2936 59 IASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTT 113 (174)
Q Consensus 59 ~veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T 113 (174)
+++|....+++++ ++++.+++++.+.+.||.|.+.+.|.+++ ..+|.++|++
T Consensus 3 ~i~i~~~~~~~~~-~~~l~~~~~~~l~~~lgkp~~~~~v~~~~--~~~~~~~g~~ 54 (115)
T 2xcz_A 3 LINIQASVPAVAD-ANSLLQELSSKLAELLGKPEKYVMTSLQC--GVPMTFSGNT 54 (115)
T ss_dssp EEEEEESSCCCTT-HHHHHHHHHHHHHHHHTCCGGGCEEEEEC--SCCCCBTTBC
T ss_pred EEEEEecCCCchh-HHHHHHHHHHHHHHHHCCChHHEEEEEEC--CCceEECCCC
Confidence 5677777778888 99999999999999999999999999885 5889999974
No 51
>3b64_A Macrophage migration inhibitory factor-like protein; cytokine, MIF, LM1740MIF, lmmif, unknown function; 1.03A {Leishmania major}
Probab=97.22 E-value=0.0006 Score=48.68 Aligned_cols=53 Identities=15% Similarity=0.191 Sum_probs=45.8
Q ss_pred CCeEEEEeCCC-CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCeeEEecCC
Q psy2936 1 MPVFRIETNIP-KEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGS 53 (174)
Q Consensus 1 MP~i~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~~m~fgGs 53 (174)
|.+++|+.... +.+++++|.+++++++++.+|.|.+++.|.+.+..+|.+||+
T Consensus 57 ~~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~~~e~~~wg~~G~ 110 (112)
T 3b64_A 57 VACVRVEALGGYGPSEPEKVTSIVTAAITKECGIVADRIFVLYFSPLHCGWNGT 110 (112)
T ss_dssp CEEEEEECTTCCCTTHHHHHHHHHHHHHHHHHCCCGGGEEEEEECCSCCEETTE
T ss_pred EEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcCcceEEEEEEEhhHeeECCE
Confidence 45778886554 667899999999999999999999999999988778999885
No 52
>1hfo_A Migration inhibitory factor; tautomerase; 1.65A {Trichinella spiralis} SCOP: d.80.1.3
Probab=97.10 E-value=0.00059 Score=48.68 Aligned_cols=53 Identities=11% Similarity=0.063 Sum_probs=45.3
Q ss_pred CCeEEEEeCCC-CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCe--eEEecCC
Q psy2936 1 MPVFRIETNIP-KEKIPANFGKETGALVAKTLGKPENYVAVIVVPDV--NLVFGGS 53 (174)
Q Consensus 1 MP~i~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~--~m~fgGs 53 (174)
|++++|+.... +.+++++|.+++++++++.+|.|.+.+.|.+.+.. +|.+||.
T Consensus 56 ~~~i~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~~~e~~~~~wg~~G~ 111 (113)
T 1hfo_A 56 AAFGTLMSIGGIEPSRNRDHSAKLFDHLNTKLGIPKNRMYIHFVNLNGDDVGWNGT 111 (113)
T ss_dssp CEEEEEEESSSCSHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEEECCGGGEEETTE
T ss_pred eEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcCeEEEEEEECCHHHeeeCCE
Confidence 45788887655 66778999999999999999999999999987654 8999985
No 53
>3ej9_B Beta-subunit of trans-3-chloroacrylic acid dehalo; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, isomerase, hydrolase; 1.50A {Pseudomonas pavonaceae} SCOP: d.80.1.1 PDB: 3ej7_B 3ej3_B 1s0y_B
Probab=97.03 E-value=0.0011 Score=44.40 Aligned_cols=53 Identities=11% Similarity=0.221 Sum_probs=46.1
Q ss_pred CeEEEEeCCC-CCCchhhHHHHHHHHHHHHhCCCcceEEEEE--eCCeeEEecCCC
Q psy2936 2 PVFRIETNIP-KEKIPANFGKETGALVAKTLGKPENYVAVIV--VPDVNLVFGGSD 54 (174)
Q Consensus 2 P~i~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i--~~~~~m~fgGs~ 54 (174)
|+++++.-.. +.++++.|..++++++++.+|.|.+.|.|.+ .+..+|..||.-
T Consensus 1 Pi~qi~i~EGRT~EQK~~lI~~VT~a~~eslgap~esVrVlItE~p~en~gi~G~~ 56 (70)
T 3ej9_B 1 PFIECHIATGLSVARKQQLIRDVIDVTNKSIGSDPKIINVLLVEHAEANMSISGRI 56 (70)
T ss_dssp CEEEEEEESCCCHHHHHHHHHHHHHHHHHHHCCCGGGCEEEEEEECGGGEESTTCC
T ss_pred CeeEEEEecCCCHHHHHHHHHHHHHHHHHHcCCChHHEEEEeeeCChhhceeeeeE
Confidence 8999999888 7789999999999999999999999666555 577899999863
No 54
>1uiz_A MIF, macrophage migration inhibitory factor; cytokine, tautomerase; 2.50A {Xenopus laevis} SCOP: d.80.1.3
Probab=96.95 E-value=0.00099 Score=47.67 Aligned_cols=54 Identities=19% Similarity=0.119 Sum_probs=45.2
Q ss_pred CCeEEEEeCCC-CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCe--eEEecCCC
Q psy2936 1 MPVFRIETNIP-KEKIPANFGKETGALVAKTLGKPENYVAVIVVPDV--NLVFGGSD 54 (174)
Q Consensus 1 MP~i~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~--~m~fgGs~ 54 (174)
+.+++|+.... +.+++++|.+++++++++.+|.|.+++.|.+.+.. +|.+||.+
T Consensus 57 ~~~v~i~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~~~e~~~~~wg~~G~t 113 (115)
T 1uiz_A 57 CAVCSLCSIGKIGGPQNKSYTKLLCDILTKQLNIPANRVYINYYDLNAANVGWNGST 113 (115)
T ss_dssp CEEEEEEESSCCSHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEEECCGGGEEETTEE
T ss_pred eEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcceEEEEEEECCHHHeeeCCEE
Confidence 35778887655 66778999999999999999999999999887654 89999853
No 55
>2os5_A Acemif; macrophage migration inhibitory factor, cytokine, nematode,; 1.60A {Ancylostoma ceylanicum} PDB: 3rf4_A* 3rf5_A*
Probab=96.74 E-value=0.0019 Score=46.60 Aligned_cols=54 Identities=15% Similarity=0.204 Sum_probs=45.3
Q ss_pred CCeEEEEeCCC-CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCe--eEEecCCC
Q psy2936 1 MPVFRIETNIP-KEKIPANFGKETGALVAKTLGKPENYVAVIVVPDV--NLVFGGSD 54 (174)
Q Consensus 1 MP~i~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~--~m~fgGs~ 54 (174)
+.+++|+.... +.+++++|.+++++++++.+|.|.+.+.|.+.+.. +|.+||..
T Consensus 57 ~~~i~I~~~~g~~~eqk~~l~~~i~~~l~~~lgi~~~~v~I~~~e~~~~~wg~~G~~ 113 (119)
T 2os5_A 57 VAVIKVESIGALSADDNIRHTQKITQFCQDTLKLPKDKVIITYFDLQPIHVGFNGTT 113 (119)
T ss_dssp CEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEEECCGGGCEETTEE
T ss_pred eEEEEEEEecCCCHHHHHHHHHHHHHHHHHHhCcCcccEEEEEEECCHHHeeECCEE
Confidence 35778887655 66778999999999999999999999999887654 89999864
No 56
>1gyx_A YDCE, B1461, hypothetical protein YDCE; tautomerase, isomerase, complete proteo; HET: EPE; 1.35A {Escherichia coli} SCOP: d.80.1.1 PDB: 1gyj_A* 1gyy_A*
Probab=96.55 E-value=0.0027 Score=42.38 Aligned_cols=44 Identities=11% Similarity=0.209 Sum_probs=38.6
Q ss_pred CeEEEEeCCC--CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCC
Q psy2936 2 PVFRIETNIP--KEKIPANFGKETGALVAKTLGKPENYVAVIVVPD 45 (174)
Q Consensus 2 P~i~i~TNv~--~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~ 45 (174)
|+++|+...+ +.+++++|.+++++++++.+|.|.+.+.|.+.+.
T Consensus 1 P~I~I~l~~Grls~eqk~~L~~~l~~~l~~~lgip~~~v~V~i~e~ 46 (76)
T 1gyx_A 1 PHIDIKCFPRELDEQQKAALAADITDVIIRHLNSKDSSISIALQQI 46 (76)
T ss_dssp CEEEEEESCCCCCHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEEC
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHHHhCcCCceEEEEEEEe
Confidence 8999997655 5678899999999999999999999999888754
No 57
>1u9d_A Hypothetical protein VC0714; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics; 1.70A {Vibrio cholerae o1 biovar eltor str} SCOP: d.80.1.5
Probab=96.29 E-value=0.0034 Score=46.42 Aligned_cols=52 Identities=8% Similarity=0.125 Sum_probs=42.9
Q ss_pred CCeEEEEeCCCCCCchhhHHHHHHHHHHHHhCCCcceEEEEEe--CCeeEEecCC
Q psy2936 1 MPVFRIETNIPKEKIPANFGKETGALVAKTLGKPENYVAVIVV--PDVNLVFGGS 53 (174)
Q Consensus 1 MP~i~i~TNv~~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~--~~~~m~fgGs 53 (174)
||+++|.---.+.++++++.+.++++++++ +.|.+.|.|.+. +...++.||.
T Consensus 67 MP~VeV~~fgRt~EqK~~la~~IT~av~~~-~~~~e~V~Vif~el~~~~y~~gG~ 120 (122)
T 1u9d_A 67 YPMVEVLWFGREQQTQDQIAQVITDQIRQL-LGADSHLAVVFIPLQRTAYYLDGQ 120 (122)
T ss_dssp CCEEEEEESCCCHHHHHHHHHHHHHHHHHH-HCTTCCCEEEEEECCGGGCEETTE
T ss_pred CCEEEEEEcCCCHHHHHHHHHHHHHHHHHh-CCCCceEEEEEEecCHHHeeeCCE
Confidence 999999999447788999999999999999 778777777665 4557777773
No 58
>3t5s_A Gilaa.00834.A, macrophage migration inhibitory factor; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Giardia lamblia}
Probab=95.90 E-value=0.013 Score=43.45 Aligned_cols=52 Identities=10% Similarity=0.008 Sum_probs=33.2
Q ss_pred eEEEEeCCC-CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCC--eeEEecCCC
Q psy2936 3 VFRIETNIP-KEKIPANFGKETGALVAKTLGKPENYVAVIVVPD--VNLVFGGSD 54 (174)
Q Consensus 3 ~i~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~--~~m~fgGs~ 54 (174)
+++|+..-. +.++++++.+.+++++.+.||.|.+++.|.+.+- ..|.++|++
T Consensus 80 ~v~i~sig~~t~e~n~~~s~~i~~~l~~~Lgi~~~riyI~f~d~~~~~wg~nG~T 134 (135)
T 3t5s_A 80 FVDFYCIGVISQAKNPSISAAITGCLTQHFKVKPERVYISFNEAKGHNWGFNGST 134 (135)
T ss_dssp EEEEECCC-----CCHHHHHHHHHHHHHHHCCCGGGEEEEEEC------------
T ss_pred EEEEEEEEEEeccCCchHHHHHHHHHHHhcccCccEEEEEeccccCcccccCCCc
Confidence 456665444 5677899999999999999999999999999876 788888864
No 59
>3fwu_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.80A {Leishmania major}
Probab=95.83 E-value=0.017 Score=42.75 Aligned_cols=52 Identities=15% Similarity=0.196 Sum_probs=43.9
Q ss_pred eEEEEeCCC-CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCeeEEecCCC
Q psy2936 3 VFRIETNIP-KEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSD 54 (174)
Q Consensus 3 ~i~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~~m~fgGs~ 54 (174)
+++|+..-. ..++.+++.+.+++++.+.||.|.+++.|.+.+-..|-++|++
T Consensus 80 ~v~i~sig~~~~e~n~~~s~~i~~~l~~~LgI~~~riyI~f~d~~~wG~nG~t 132 (133)
T 3fwu_A 80 CVRVEALGGYGPSEPEKVTSIVTAAITKECGIVADRIFVLYFSPLHCGWNGTN 132 (133)
T ss_dssp EEEEECTTCCCTTHHHHHHHHHHHHHHHHHCCCGGGEEEEEECCSCCEETTEE
T ss_pred EEEEEEcCCCCHHHHHHHHHHHHHHHHHHhCcChhhEEEEEEEHHHEeeCcEE
Confidence 456665544 4577899999999999999999999999999988899888863
No 60
>3fwt_A Macrophage migration inhibitory factor-like protein; homotrimer, tautomerase, cytokine; 1.90A {Leishmania major}
Probab=95.66 E-value=0.033 Score=41.14 Aligned_cols=58 Identities=17% Similarity=0.237 Sum_probs=50.8
Q ss_pred CCceeEEEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCce
Q psy2936 54 DAPAAIASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTT 113 (174)
Q Consensus 54 ~~P~a~veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T 113 (174)
..|.-+++|+..-+.+.++.+++.+.+++.+.+.+|.|.+.+.|.+.+ ...|-++|+.
T Consensus 18 ~~~MP~i~i~tnv~~s~~~~~~l~~~ls~~la~~lgKPe~~v~V~~~~--~~~m~fgGs~ 75 (133)
T 3fwt_A 18 GSHMPFLQTIVSVSLDDQKRANLSAAYGMICREELGKPEDFVMTAFSD--KTPISFQGST 75 (133)
T ss_dssp CEEEEEEEEEESSCCCHHHHHHHHHHHHHHHHHHHSCTTCCCEEEEEC--SCCCCBTTBC
T ss_pred CCCCCEEEEEeCCCCCHHHHHHHHHHHHHHHHHHhCcCcCEEEEEEEC--CceEEECCCC
Confidence 367778888888888888889999999999999999999999999987 4778888864
No 61
>4dh4_A MIF; trimer, isomerase; 1.82A {Toxoplasma gondii}
Probab=95.29 E-value=0.054 Score=38.47 Aligned_cols=76 Identities=11% Similarity=0.136 Sum_probs=55.5
Q ss_pred EEEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCceec----c--ccc--CccchHHHHHH
Q psy2936 59 IASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFH----E--IFG--GPVLNKRAMES 130 (174)
Q Consensus 59 ~veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~~----~--l~~--~~~~~~~~~~~ 130 (174)
+++++.--..+.++.+++.+++++.+.+.||-|.+++.|.+.+- ..|-++|++-. + .++ .++.+.+..+.
T Consensus 2 ~i~~~TNv~~~~~~~~~l~~~ls~~~a~~lgKPe~~v~V~~~~~--~~m~fgGs~~p~a~v~i~~ig~~~~e~~~~l~~~ 79 (114)
T 4dh4_A 2 KCMIFCPVAATPAQQDALLKDAEKAVADALGKPLSYVMVGYSQT--GQMRFGGSSDPCAFIRVASIGGITSSTNCKIAAA 79 (114)
T ss_dssp EEEEEESSCCCHHHHHHHHHHHHHHHHHHHTCCGGGCEEEEEEC--SCCCBTTBCSCCEEEEEEEESCCCHHHHHHHHHH
T ss_pred EEEEEecCCCchhhHHHHHHHHHHHHHHHHCCChHHEEEEEeCC--ceEEECCcCCCeEEEEEEEEcCCCHHHHHHHHHH
Confidence 45677766677889999999999999999999999999999985 57888886531 1 111 33444455555
Q ss_pred HHHhhh
Q psy2936 131 IVLEFK 136 (174)
Q Consensus 131 ~~~~~~ 136 (174)
|..-+.
T Consensus 80 i~~~l~ 85 (114)
T 4dh4_A 80 LSAACE 85 (114)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555544
No 62
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=94.54 E-value=0.051 Score=38.72 Aligned_cols=52 Identities=13% Similarity=0.072 Sum_probs=42.1
Q ss_pred eEEEEeCCC-CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCC--eeEEecCCC
Q psy2936 3 VFRIETNIP-KEKIPANFGKETGALVAKTLGKPENYVAVIVVPD--VNLVFGGSD 54 (174)
Q Consensus 3 ~i~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~--~~m~fgGs~ 54 (174)
+++|+.--. ..++.+++.+.+++++.+.||.|.+++.|.+.+- ..|-++|++
T Consensus 58 ~~~v~sig~~~~~~n~~~s~~i~~~l~~~Lgi~~~riyI~f~d~~~~~~g~~G~t 112 (114)
T 3djh_A 58 LCSLHSIGKIGGAQNRSYSKLLCGLLAERLRISPDRVYINYYDMNAANVGWNNST 112 (114)
T ss_dssp EEEEEESSCCSHHHHHHHHHHHHHHHHHHHCCCGGGEEEEEEECCGGGEEETTEE
T ss_pred EEEEEEccCCCHHHHHHHHHHHHHHHHHHhCcCcceEEEEEEECCHHHeeECCEE
Confidence 455665444 4467889999999999999999999999999875 788888853
No 63
>3mb2_B 4-oxalocrotonate tautomerase family enzyme - beta; trans-3-chloroacrylic acid dehalogenase, CAAD, dehalogenase, hydrolase; 2.41A {Chloroflexus aurantiacus}
Probab=94.53 E-value=0.051 Score=36.33 Aligned_cols=43 Identities=16% Similarity=0.336 Sum_probs=35.5
Q ss_pred CeEEEEeCCC---CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeC
Q psy2936 2 PVFRIETNIP---KEKIPANFGKETGALVAKTLGKPENYVAVIVVP 44 (174)
Q Consensus 2 P~i~i~TNv~---~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~ 44 (174)
|++++-..-. +.+++++|.+++++.+++++|.|..++-|.|.+
T Consensus 1 p~lev~~~~~~pRT~EQKralaeE~T~if~evLGcpPgsV~IVi~E 46 (72)
T 3mb2_B 1 PMLEVFYSGDRPPDRTRKQAFAAEASAIFQRVIGTPPGRLQLIIQI 46 (72)
T ss_dssp CEEEEEECCSSCCCHHHHHHHHHHHHHHHHHHHCCCTTCCEEEEEE
T ss_pred CceEEEecCCCCCCHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEe
Confidence 6777776555 457899999999999999999999988777754
No 64
>1otg_A 5-carboxymethyl-2-hydroxymuconate isomerase; 2.10A {Escherichia coli} SCOP: d.80.1.2
Probab=87.85 E-value=0.27 Score=35.73 Aligned_cols=44 Identities=5% Similarity=-0.044 Sum_probs=37.1
Q ss_pred CCeEEEEeCCC-CCCchhhHHHHHHHHHHHHh----CCCcceEEEEEeC
Q psy2936 1 MPVFRIETNIP-KEKIPANFGKETGALVAKTL----GKPENYVAVIVVP 44 (174)
Q Consensus 1 MP~i~i~TNv~-~~~~~~~f~~~ls~~vaevl----gKPe~~ImV~i~~ 44 (174)
||+++|+.--+ +.++++++.+++.+++++.+ |.+...+.|.+.+
T Consensus 60 fvhi~i~i~~GRs~eqK~~L~~~v~~~l~~~l~~~~~~~~~~vsv~i~E 108 (125)
T 1otg_A 60 FVHMTLKIGAGRSLESRQQAGEMLFELIKTHFAALMESRLLALSFEIEE 108 (125)
T ss_dssp EEEEEEEECTTCCHHHHHHHHHHHHHHHHHHTHHHHTTSEEEEEEEEEE
T ss_pred eEEEEEEECCCCCHHHHHHHHHHHHHHHHHHhhhhcCCCceEEEEEEEE
Confidence 67888888777 77889999999999999987 5588888888865
No 65
>3kan_A D-dopachrome tautomerase; immune response, cytokine, cytokine-inhibitor C; HET: RW1; 1.13A {Homo sapiens} SCOP: d.80.1.3 PDB: 1dpt_A* 3ker_A*
Probab=87.76 E-value=0.57 Score=33.42 Aligned_cols=75 Identities=15% Similarity=0.079 Sum_probs=50.6
Q ss_pred EEEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCceec----c--cccC--c-cchHHHHH
Q psy2936 59 IASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFH----E--IFGG--P-VLNKRAME 129 (174)
Q Consensus 59 ~veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~~----~--l~~~--~-~~~~~~~~ 129 (174)
+++++.--..+.+. +++.+++++.+.+.+|-|.+++.|.+.+- ..|-++|+.-. + .++. + +.+.+..+
T Consensus 2 ~i~l~TNv~~~~~~-~~l~~~ls~~~a~~lgKpe~~vmV~v~~~--~~m~fgGs~~P~a~~~v~siG~~~~~~~n~~~s~ 78 (117)
T 3kan_A 2 FLELDTNLPANRVP-AGLEKRLCAAAASILGKPADRVNVTVRPG--LAMALSGSTEPCAQLSISSIGVVGTAEDNRSHSA 78 (117)
T ss_dssp EEEEEESSCGGGSC-TTHHHHHHHHHHHHHTCCGGGCEEEEECS--CCCCBTTBCSSCEEEEEEEESSSSSHHHHHHHHH
T ss_pred EEEEEecCccccch-HHHHHHHHHHHHHHHCCChHHEEEEEeCC--CeEEECCCCCceEEEEEEEecCCCcHHHHHHHHH
Confidence 34555544444333 56999999999999999999999999974 67888886531 1 2222 2 33556666
Q ss_pred HHHHhhh
Q psy2936 130 SIVLEFK 136 (174)
Q Consensus 130 ~~~~~~~ 136 (174)
.|..-++
T Consensus 79 ~i~~~l~ 85 (117)
T 3kan_A 79 HFFEFLT 85 (117)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665554
No 66
>1n91_A ORF, hypothetical protein; alpha+beta, northeast structural genomics consortium, PSI, P structure initiative, NESG; NMR {Escherichia coli} SCOP: d.206.1.1 PDB: 1yh5_A
Probab=78.74 E-value=4.6 Score=28.85 Aligned_cols=58 Identities=10% Similarity=0.183 Sum_probs=36.9
Q ss_pred eEEEEEeCCee-EEecCCCCceeEEEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEE
Q psy2936 37 YVAVIVVPDVN-LVFGGSDAPAAIASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISY 99 (174)
Q Consensus 37 ~ImV~i~~~~~-m~fgGs~~P~a~veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f 99 (174)
.+.|.+.|+.. -.+.|-.+...-+.| ..+-..-+-.++++++|.+.||||+.+|.|..
T Consensus 16 ~l~v~V~P~A~r~~I~g~~~~~LkV~v-----~ApP~dGkAN~ali~~LAk~l~V~ks~V~Iv~ 74 (108)
T 1n91_A 16 VLRLYIQPKASRDSIVGLHGDEVKVAI-----TAPPVDGQANSHLVKFLGKQFRVAKSQVVIEK 74 (108)
T ss_dssp EEEEEEECSSSSCEEEEECSSCEEEEC-----CCCSSHHHHHHHHHHHHHHHTCCCTTTEEESS
T ss_pred EEEEEEeeCCCcceeecccCCEEEEEE-----ecCCCCChHHHHHHHHHHHHhCCccceEEEEe
Confidence 45677777642 233443444443333 22334456667889999999999999998754
No 67
>2y9j_Y Lipoprotein PRGK, protein PRGK; protein transport, type III secretion, IR1, inner membrane R C24-fold; 6.40A {Salmonella enterica subsp}
Probab=63.51 E-value=12 Score=28.49 Aligned_cols=82 Identities=6% Similarity=-0.063 Sum_probs=53.4
Q ss_pred hhHHHHHHHHHHHHhCCCcceEEEEEeCCeeEEecCCCCceeEEEEEEeecCChHHHHHHHHHHHHHHHhhh-CCCCCcE
Q psy2936 17 ANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKLGTAENKKHSAVLFPHIEKTL-GIPKDRM 95 (174)
Q Consensus 17 ~~f~~~ls~~vaevlgKPe~~ImV~i~~~~~m~fgGs~~P~a~veI~sig~~~~e~n~~~s~aI~~~l~e~L-GIp~dRi 95 (174)
.++..++++.+..+-|.-..+|.+.+-.....+......|.|-|-|+.-++.. ......+|..++..-. |+++++|
T Consensus 87 rale~ELartI~~i~gV~~ArVhl~lP~~~~~f~~~~~~~sASV~l~~~~g~l---~~~qv~~I~~LVa~SV~gL~~e~V 163 (170)
T 2y9j_Y 87 SAIEQRLEQSLQTMEGVLSARVHISYDIDAGENGRPPKPVHLSALAVYERGSP---LAHQISDIKRFLKNSFADVDYDNI 163 (170)
T ss_dssp HHHHHHHHHHHTTSTTEEEEEEEEEECCCCCBTTBCCCCEEEEEEEEECTTCC---CGGGHHHHHHHHHHHSTTCCGGGE
T ss_pred HHHHHHHHHHHHcCCCeeEEEEEEEcCCCcCcccccCCCCcEEEEEEECCCCC---CHHHHHHHHHHHHHhcCCCCccce
Confidence 35555666666666666666777766443232223345788888888876642 2345566777776665 8999999
Q ss_pred EEEEEe
Q psy2936 96 YISYID 101 (174)
Q Consensus 96 yI~f~d 101 (174)
.|.+.+
T Consensus 164 tVv~~~ 169 (170)
T 2y9j_Y 164 SVVLSE 169 (170)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 999865
No 68
>1jwq_A N-acetylmuramoyl-L-alanine amidase CWLV; open alpha-beta-alpha, hydrolase; 1.80A {Paenibacillus polymyxa} SCOP: c.56.5.6
Probab=57.27 E-value=58 Score=24.49 Aligned_cols=84 Identities=12% Similarity=0.101 Sum_probs=55.2
Q ss_pred eEEEEeCCCCC-C-----------chhhHHHHHHHHHHHHhCCCcceEEEEEeCCeeEEecCCCCceeEEEEEEeecC--
Q psy2936 3 VFRIETNIPKE-K-----------IPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKL-- 68 (174)
Q Consensus 3 ~i~i~TNv~~~-~-----------~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~~m~fgGs~~P~a~veI~sig~~-- 68 (174)
+|.|+.|...+ . ..+.|.+.+.+.+.+.+|.+...+- .......-.+.-|+.++|+-.+...
T Consensus 76 fiSiH~Na~~~~~~~G~ev~~~~~~s~~lA~~i~~~l~~~~g~~~rgvk----~~~~~vLr~t~~PavLvE~gFisN~~d 151 (179)
T 1jwq_A 76 FVSIHANSSGSSASNGTETYYQRSASKAFANVMHKYFAPATGLTDRGIR----YGNFHVIRETTMPAVLLEVGYLSNAKE 151 (179)
T ss_dssp EEEEEEECCSSTTCCCEEEEECSGGGHHHHHHHHHHHHHHHCSCEEEEE----ECCCHHHHSCSSCEEEEEEEETTSHHH
T ss_pred EEEEccCCCCCCCCCeEEEEEEChHHHHHHHHHHHHHHHHcCCCCCCcc----cCcchhccCCCCCEEEEEecCCCCHHH
Confidence 56777776521 1 2467888888888888875544332 2212222356789999999887542
Q ss_pred -----ChHHHHHHHHHHHHHHHhhhCC
Q psy2936 69 -----GTAENKKHSAVLFPHIEKTLGI 90 (174)
Q Consensus 69 -----~~e~n~~~s~aI~~~l~e~LGI 90 (174)
+++..++++++|.+-+.+-++.
T Consensus 152 ~~~l~~~~~~~~~A~ai~~gI~~y~~~ 178 (179)
T 1jwq_A 152 EATLFDEDFQNRVAQGIADGITEYLDV 178 (179)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHcC
Confidence 3455678899999888887764
No 69
>3lax_A Phenylacetate-coenzyme A ligase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.43A {Bacteroides vulgatus}
Probab=56.49 E-value=12 Score=25.30 Aligned_cols=42 Identities=5% Similarity=-0.008 Sum_probs=31.9
Q ss_pred CCCCceeEEEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCC
Q psy2936 52 GSDAPAAIASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKD 93 (174)
Q Consensus 52 Gs~~P~a~veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~d 93 (174)
+.+.+.+++++..-...+.+.-.++.+.+.+.+.+.+|++++
T Consensus 42 ~~~~~~~~V~~~~~~~~~~~~~~~l~~~i~~~l~~~~gv~~~ 83 (109)
T 3lax_A 42 SNDEMTVEVELSQLFTDDYGRLQALTREITRQLKDEILVTPR 83 (109)
T ss_dssp TEEEEEEEEEECTTCCCCHHHHHHHHHHHHHHHHHHHSSCCE
T ss_pred cceeEEEEEEEeeccccccchhhhhHHHHHHHHHHHhCCccc
Confidence 345677777775544455777788999999999999999873
No 70
>1yfs_A Alanyl-tRNA synthetase; alpha-beta fold, helix-loop-helix motif, amino acid binding, ligase; 2.08A {Aquifex aeolicus} SCOP: a.203.1.1 d.104.1.1 PDB: 1yfr_A* 1riq_A 1yft_A 1ygb_A 3htz_A
Probab=50.45 E-value=13 Score=32.99 Aligned_cols=31 Identities=19% Similarity=0.438 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHhhhCCCCCcEEEEEEeC
Q psy2936 72 ENKKHSAVLFPHIEKTLGIPKDRMYISYIDS 102 (174)
Q Consensus 72 ~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~ 102 (174)
-|++.++---++|.+.||+|++|+||+++.-
T Consensus 103 FK~eAI~~AwE~LT~~lgl~~~rL~vTv~~~ 133 (465)
T 1yfs_A 103 FKKEAIEYAWEFVTEVLKLPKEKLYVSVYKD 133 (465)
T ss_dssp CHHHHHHHHHHHHHHTSCCCGGGEEEEEETT
T ss_pred hHHHHHHHHHHHHHhhcCCCHHHeEEEEeCC
Confidence 3555666668889999999999999999863
No 71
>2hqs_H Peptidoglycan-associated lipoprotein; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: d.79.7.1 PDB: 2w8b_C 1oap_A
Probab=49.00 E-value=63 Score=22.33 Aligned_cols=28 Identities=14% Similarity=0.147 Sum_probs=20.9
Q ss_pred hHHHHHHH----HHHHHHHHhhhCCCCCcEEEE
Q psy2936 70 TAENKKHS----AVLFPHIEKTLGIPKDRMYIS 98 (174)
Q Consensus 70 ~e~n~~~s----~aI~~~l~e~LGIp~dRiyI~ 98 (174)
.+.|.+++ .++.++|.+ .||+++|+.+.
T Consensus 52 ~~~N~~LS~~RA~aV~~~L~~-~Gi~~~ri~~~ 83 (118)
T 2hqs_H 52 PEYNISLGERRANAVKMYLQG-KGVSADQISIV 83 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cCCCHHHEEEE
Confidence 45676665 578888887 49999998654
No 72
>3hrd_B Nicotinate dehydrogenase medium molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=48.57 E-value=13 Score=31.09 Aligned_cols=39 Identities=10% Similarity=0.186 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhhhCCCCCcEEEEEEeCC--CCCeeecCcee
Q psy2936 76 HSAVLFPHIEKTLGIPKDRMYISYIDSS--TDVVGYNGTTF 114 (174)
Q Consensus 76 ~s~aI~~~l~e~LGIp~dRiyI~f~d~~--~~nwG~~G~T~ 114 (174)
....+.....++||++.++|.|..-|.+ +..+|..|+..
T Consensus 49 ~~T~laQIaAe~Lgi~~e~V~v~~~DT~~~p~~~~T~gSrs 89 (330)
T 3hrd_B 49 SGTAMAQIAAEELGLDYEKIHVTWGDTMVTPDGGATSASRQ 89 (330)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEEESBTTTSCCCCCSCTTCH
T ss_pred HHHHHHHHHHHHhCCCHHHEEEEecCCCCCCCCCCCcchHh
Confidence 3345788899999999999999998875 33445445444
No 73
>3hrd_B Nicotinate dehydrogenase medium molybdopterin subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=48.35 E-value=7.4 Score=32.59 Aligned_cols=74 Identities=12% Similarity=0.113 Sum_probs=46.8
Q ss_pred CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCeeEEecCCCCceeEEEEEEeecCC--------hHHHHHHHHHHHHH
Q psy2936 12 KEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKLG--------TAENKKHSAVLFPH 83 (174)
Q Consensus 12 ~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~~m~fgGs~~P~a~veI~sig~~~--------~e~n~~~s~aI~~~ 83 (174)
..+.-+...+.+++.+|+.||-|.+.|.|..-+-.. .|... -+.|.++ ....+++-+++.+.
T Consensus 42 ~~emGQG~~T~laQIaAe~Lgi~~e~V~v~~~DT~~-------~p~~~---~T~gSrst~~~g~Av~~Aa~~lr~~L~~~ 111 (330)
T 3hrd_B 42 AADIGQGSGTAMAQIAAEELGLDYEKIHVTWGDTMV-------TPDGG---ATSASRQTLITGNAVILACRQAKETLAKT 111 (330)
T ss_dssp CCCSSSCHHHHHHHHHHHHHTCCGGGEEEEESBTTT-------SCCCC---CSCTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHhCCCHHHEEEEecCCCC-------CCCCC---CCcchHhHHhHHHHHHHHHHHHHHHHHHH
Confidence 456778999999999999999999999987644211 12110 0112222 22334444555555
Q ss_pred HHhhhCCCCCcE
Q psy2936 84 IEKTLGIPKDRM 95 (174)
Q Consensus 84 l~e~LGIp~dRi 95 (174)
-.+.|+++++.+
T Consensus 112 AA~~~~~~~~~l 123 (330)
T 3hrd_B 112 AAEKLDCAPEEL 123 (330)
T ss_dssp HHSSSCCSSSCC
T ss_pred HHHHhCCCHHHE
Confidence 666789988875
No 74
>3lxy_A 4-hydroxythreonine-4-phosphate dehydrogenase; PDXA, NAD-DEPE dehydrogenase, metal-binding, NAD, NADP, oxidoreductase, PY biosynthesis; HET: SUC; 1.70A {Yersinia pestis} SCOP: c.77.1.3 PDB: 1ps6_A* 1ptm_A 1ps7_A 1r8k_A
Probab=48.18 E-value=51 Score=27.77 Aligned_cols=70 Identities=13% Similarity=0.257 Sum_probs=46.0
Q ss_pred HHHHHHHhCCCcceEEEEEeCCeeEEecCCCCceeEEEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEE
Q psy2936 24 GALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYIS 98 (174)
Q Consensus 24 s~~vaevlgKPe~~ImV~i~~~~~m~fgGs~~P~a~veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~ 98 (174)
++.+++..|.+ +.+|....++-+..+--+.-|.. .....+++|.-.+....+.+.|.+.+||+..||-|.
T Consensus 141 Te~la~~~g~~-~~~mml~~~~lrv~lvTtHipL~----~v~~~it~e~i~~~i~~~~~~l~~~fGi~~PrIAV~ 210 (334)
T 3lxy_A 141 TEFFADRSHCQ-RVVMMLATEELRVALATTHLPLL----AVPGAITQASLHEVITILDNDLKTKFGITQPQIYVC 210 (334)
T ss_dssp HHHHHHHHTCS-CCEEEEEETTEEEEESSCSCCGG----GHHHHCCHHHHHHHHHHHHHHHHHTSCCSSCCEEEE
T ss_pred HHHHHHHhCCC-CceEEEEcCCceEEEecCCCcHH----HHhhhCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEE
Confidence 56677777763 35555555554444433333322 012447888889999999999999999999998765
No 75
>1rm6_A 4-hydroxybenzoyl-COA reductase alpha subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.41.1.1 d.133.1.1 PDB: 1sb3_A*
Probab=44.24 E-value=14 Score=34.51 Aligned_cols=83 Identities=14% Similarity=0.145 Sum_probs=53.5
Q ss_pred CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCeeEEecC-CCCceeEEEEEEeecCChHHHHHHHHHHHHHHHhhhCC
Q psy2936 12 KEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGG-SDAPAAIASLMSIGKLGTAENKKHSAVLFPHIEKTLGI 90 (174)
Q Consensus 12 ~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~~m~fgG-s~~P~a~veI~sig~~~~e~n~~~s~aI~~~l~e~LGI 90 (174)
..+..+...+.+++.+|+.||-|.+.|.|..-+-...-+++ +..-. ...+.|.--....+++-+++.+.-.+.|++
T Consensus 478 ~~e~GqG~~T~~aQiaAe~Lgip~e~V~v~~~DT~~~p~~~~t~aSr---~t~~~G~Av~~Aa~~l~~~l~~~aa~~l~~ 554 (769)
T 1rm6_A 478 AADIGQGSNTMASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSR---VTFMVGNASISAAEELKGVLVKAAAKKLDA 554 (769)
T ss_dssp CCCSSSCHHHHHHHHHHHHHTCCGGGEEEEESBTTTSCCCCCSCTTC---HHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CccCCCCHHHHHHHHHHHHhCCCHHHEEEecCCCCCCCCCCCCccch---HHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 45677899999999999999999999999775432211221 10000 001112222455667777777777888999
Q ss_pred CCCcEEE
Q psy2936 91 PKDRMYI 97 (174)
Q Consensus 91 p~dRiyI 97 (174)
+++++.+
T Consensus 555 ~~~~l~~ 561 (769)
T 1rm6_A 555 REEDIEV 561 (769)
T ss_dssp CGGGEEE
T ss_pred CHHHeEE
Confidence 9988653
No 76
>3e6q_A Putative 5-carboxymethyl-2-hydroxymuconate isomer; structural genomics, APC7683, isomerase, PSI-2, protein STRU initiative; HET: GOL IMD; 1.75A {Pseudomonas aeruginosa}
Probab=42.78 E-value=20 Score=26.57 Aligned_cols=40 Identities=13% Similarity=0.028 Sum_probs=30.1
Q ss_pred EEEeCCC-CCCchhhHHHHHHHHHHHHhCCCc---ceEEEEEeC
Q psy2936 5 RIETNIP-KEKIPANFGKETGALVAKTLGKPE---NYVAVIVVP 44 (174)
Q Consensus 5 ~i~TNv~-~~~~~~~f~~~ls~~vaevlgKPe---~~ImV~i~~ 44 (174)
.|+.--+ +.++++++.+.+.+++.+.++.+. ..+.|.+++
T Consensus 86 ~i~ll~GRt~EqK~~L~e~v~~al~~~l~~~~~~~~~lsVeI~E 129 (146)
T 3e6q_A 86 CLSILDGRDAATRQALGESLCEVLAGAVAGGGEEGVQVSVEVRE 129 (146)
T ss_dssp EEEEETTCCHHHHHHHHHHHHHHHHHHEEECSSSCEEEEEEEEE
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHHHHhCCccCCceEEEEEEEE
Confidence 3334444 678899999999999999999765 366666654
No 77
>1t3q_B Quinoline 2-oxidoreductase large subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.41.1.1 d.133.1.1
Probab=40.96 E-value=15 Score=34.38 Aligned_cols=83 Identities=10% Similarity=0.001 Sum_probs=53.3
Q ss_pred CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCeeEEecCCCCceeEEEEEEeecCChHHHHHHHHHHHHHHHhhhCCC
Q psy2936 12 KEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKLGTAENKKHSAVLFPHIEKTLGIP 91 (174)
Q Consensus 12 ~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~~m~fgGs~~P~a~veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp 91 (174)
..+..+...+.+++.+|+.||-|.+.|.|..-+-. .-+++-+--. -...+.|.--....+++-+++.++-.+.|+++
T Consensus 503 ~~e~GqG~~T~~aQiaAe~LGip~~~V~v~~~DT~-~p~~~~t~aS--r~t~~~G~Av~~Aa~~l~~~l~~~aa~~l~~~ 579 (788)
T 1t3q_B 503 LASSGQGHETTLAQIAADVLGVPASDVVIQAGSTK-NTYGFGAYAS--RGAVIGAGSIGRAASIVRERVKQLAGHLLEAA 579 (788)
T ss_dssp CCCSSSCHHHHHHHHHHHHHTSCGGGEEEECSBTT-SCCBCCSCTT--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred CcCCCCCHHHHHHHHHHHHHCCCHHHEEEecCCCC-CCCCCCCccc--hHHHHHHHHHHHHHHHHHHHHHHHhHhhhCCC
Confidence 45677899999999999999999999999775432 2222111000 00011122224456667777777778889999
Q ss_pred CCcEEE
Q psy2936 92 KDRMYI 97 (174)
Q Consensus 92 ~dRiyI 97 (174)
++++.+
T Consensus 580 ~~~l~~ 585 (788)
T 1t3q_B 580 SEDIVI 585 (788)
T ss_dssp GGGEEE
T ss_pred HHHEEE
Confidence 988653
No 78
>2w3s_B Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 1jrp_B* 2w3r_B* 1jro_B* 2w54_B* 2w55_B*
Probab=37.79 E-value=11 Score=35.21 Aligned_cols=84 Identities=10% Similarity=0.021 Sum_probs=52.0
Q ss_pred CCCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCeeEEecC-CCCceeEEEEEEeecCChHHHHHHHHHHHHHHHhhhC
Q psy2936 11 PKEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGG-SDAPAAIASLMSIGKLGTAENKKHSAVLFPHIEKTLG 89 (174)
Q Consensus 11 ~~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~~m~fgG-s~~P~a~veI~sig~~~~e~n~~~s~aI~~~l~e~LG 89 (174)
...+..+...+.+++.+|+.||-|.+.|.|..-+-...-+++ +..-. ...+.|.--....+++-+++.++-.+.|+
T Consensus 484 g~~e~GqG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~~t~aSr---~t~~~G~Av~~Aa~~l~~~l~~~aa~~~~ 560 (777)
T 2w3s_B 484 GGTEMGQGLHAKMVQVAAAVLGIDPVQVRITATDTSKVPNTSATAASS---GADMNGMAVKDACETLRGRLAGFVAAREG 560 (777)
T ss_dssp SCCCSSSCHHHHHHHHHHHHHTSCGGGEEECCEETTTSCSCCCSCTTC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCccCCCChhHHHHHHHHHHHCCCHHHEEEEcCCCCCCCCCCCCccch---HHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 345677899999999999999999999998664321111111 10000 00011222234556666677777778889
Q ss_pred CCCCcEEE
Q psy2936 90 IPKDRMYI 97 (174)
Q Consensus 90 Ip~dRiyI 97 (174)
++++.+.+
T Consensus 561 ~~~~~l~~ 568 (777)
T 2w3s_B 561 CAARDVIF 568 (777)
T ss_dssp SCGGGCEE
T ss_pred CCHHHEEE
Confidence 99888654
No 79
>1ffv_B CUTL, molybdoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.41.1.1 d.133.1.1 PDB: 1ffu_B*
Probab=37.19 E-value=16 Score=34.25 Aligned_cols=82 Identities=13% Similarity=0.073 Sum_probs=52.4
Q ss_pred CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCeeEEecC-CCCceeEEEEEEeecCChHHHHHHHHHHHHHHHhhhCC
Q psy2936 12 KEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGG-SDAPAAIASLMSIGKLGTAENKKHSAVLFPHIEKTLGI 90 (174)
Q Consensus 12 ~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~~m~fgG-s~~P~a~veI~sig~~~~e~n~~~s~aI~~~l~e~LGI 90 (174)
..+..+...+.+++.+|+.||-|.+.|.|..-+-...-+++ +..-. ...+.|.--....+++-+++.++-.+.|++
T Consensus 519 ~~e~GqG~~T~~aQiaAe~LGi~~e~V~v~~~DT~~~p~~~~t~aSr---~t~~~G~Av~~Aa~~l~~~l~~~aa~~l~~ 595 (803)
T 1ffv_B 519 TITQGQGHQTTYAQIIATELGIPSEVIQVEEGDTSTAPYGLGTYGSR---STPVAGAAIALAARKIHAKARKIAAHMLEV 595 (803)
T ss_dssp CCCSSSCHHHHHHHHHHHHHTCCGGGEEEECCBTTTSCCCCCSCTTC---HHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CcCCCCCHHHHHHHHHHHHHCCCHHHEEEecCCCCCCCCCCCcccch---HHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 45677899999999999999999999999775432111111 10000 000112222445667777777777888899
Q ss_pred CCCcEE
Q psy2936 91 PKDRMY 96 (174)
Q Consensus 91 p~dRiy 96 (174)
+++.+.
T Consensus 596 ~~~~l~ 601 (803)
T 1ffv_B 596 NENDLD 601 (803)
T ss_dssp CGGGEE
T ss_pred CHHHEE
Confidence 988865
No 80
>1yxo_A 4-hydroxythreonine-4-phosphate dehydrogenase 1; PA0593,pyridoxine biosynthesis,oxidoreductase, structural GE PSI; 2.01A {Pseudomonas aeruginosa}
Probab=37.07 E-value=87 Score=26.32 Aligned_cols=80 Identities=11% Similarity=0.263 Sum_probs=48.5
Q ss_pred HHHHHHHhCCCcceEEEEEeCCeeEEecCCCCceeEEEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCC
Q psy2936 24 GALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSS 103 (174)
Q Consensus 24 s~~vaevlgKPe~~ImV~i~~~~~m~fgGs~~P~a~veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~ 103 (174)
++.+++..|.+ +.+|....++-+..+--+.-|.. .....++++.-.+..+.+.+.|.+.+||...||.|. -++
T Consensus 136 TE~la~~~g~~-~~~Mml~~~~LrV~lvT~HipL~----~V~~~it~e~i~~~i~~~~~~L~~~fgi~~PrIaV~--GLN 208 (328)
T 1yxo_A 136 TEFLADLTHTA-QVVMMLATRGLRVALATTHLPLR----EVADAISDERLTRVARILHADLRDKFGIAHPRILVC--GLN 208 (328)
T ss_dssp HHHHHHHTTCS-CCEEEEEETTEEEEESSCSCCHH----HHHHHCCHHHHHHHHHHHHHHHHHTTCCSSCEEEEE--CSS
T ss_pred HHHHHHHhCCC-CeEEEEecCCcEEEEeccCccHH----HHHHhcCHHHHHHHHHHHHHHHHHHcCCCCCCEEEE--ecC
Confidence 56677777753 35555444443333333223322 112347888888888888899999999999996654 454
Q ss_pred CCCeeecC
Q psy2936 104 TDVVGYNG 111 (174)
Q Consensus 104 ~~nwG~~G 111 (174)
|| -|-+|
T Consensus 209 PH-AGE~G 215 (328)
T 1yxo_A 209 PH-AGEGG 215 (328)
T ss_dssp GG-GGTTT
T ss_pred CC-CCCCC
Confidence 43 34444
No 81
>1n62_B Carbon monoxide dehydrogenase large chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.41.1.1 d.133.1.1 PDB: 1n5w_B* 1n61_B* 1n60_B* 1n63_B* 1zxi_B*
Probab=36.81 E-value=17 Score=34.12 Aligned_cols=78 Identities=13% Similarity=0.104 Sum_probs=52.4
Q ss_pred CCCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCeeEEecCCCCceeEEEEEE-----eecCChHHHHHHHHHHHHHHHh
Q psy2936 12 KEKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMS-----IGKLGTAENKKHSAVLFPHIEK 86 (174)
Q Consensus 12 ~~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~~m~fgGs~~P~a~veI~s-----ig~~~~e~n~~~s~aI~~~l~e 86 (174)
..+..+...+.+++.+|+.||-|.+.|.|..-+-...-+++ ...-| .|.--....+++-+++.++-.+
T Consensus 525 ~~e~GqG~~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~-------~t~aSr~t~~~G~Av~~Aa~~l~~~l~~~aa~ 597 (809)
T 1n62_B 525 TKSQGQGHETTYAQIIATELGIPADDIMIEEGNTDTAPYGL-------GTYGSRSTPTAGAATAVAARKIKAKAQMIAAH 597 (809)
T ss_dssp CCCSSSCHHHHHHHHHHHHHTCCGGGEEEECCBTTTSCCCC-------CSCTTCTTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHhCCCHHHEEEecCCCCCCCCCC-------CcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677899999999999999999999999775432111111 11111 1222244566777777777888
Q ss_pred hhCCCCCcEE
Q psy2936 87 TLGIPKDRMY 96 (174)
Q Consensus 87 ~LGIp~dRiy 96 (174)
.|+++++++.
T Consensus 598 ~l~~~~~~l~ 607 (809)
T 1n62_B 598 MLEVHEGDLE 607 (809)
T ss_dssp HHTSCGGGEE
T ss_pred HhCCCHHHEE
Confidence 8999988865
No 82
>3pa8_A Toxin B; CLAN CD cysteine protease, protease, toxin-peptide in complex; HET: 621 IHP; 2.00A {Clostridium difficile} PDB: 3pee_B*
Probab=34.91 E-value=1.5e+02 Score=24.00 Aligned_cols=82 Identities=15% Similarity=0.177 Sum_probs=47.6
Q ss_pred HHHHHHHHhCC-CcceEEEEEe--C-CeeEEecCCC----------Cce-----eEEEEEEeec-CCh--------HHHH
Q psy2936 23 TGALVAKTLGK-PENYVAVIVV--P-DVNLVFGGSD----------APA-----AIASLMSIGK-LGT--------AENK 74 (174)
Q Consensus 23 ls~~vaevlgK-Pe~~ImV~i~--~-~~~m~fgGs~----------~P~-----a~veI~sig~-~~~--------e~n~ 74 (174)
.+++.|.++|| |.+.|.|.+. + +...++..++ +|. .-+..+.+|+ ++. -.-.
T Consensus 47 v~eAAanL~gKHP~~SvlvQld~~d~~~~Y~v~~~d~~i~~~d~yg~P~~L~~~gkiRwqlVGHGr~e~n~~~fag~sad 126 (254)
T 3pa8_A 47 SYEAACNLFAKTPYDSVLFQKNIEDSEIAYYYNPGDGEIQEIDKYKIPSIISDRPKIKLTFIGHGKDEFNTDIFAGFDVD 126 (254)
T ss_dssp HHHHHHHHHHHCTTTEEEEETTSTTCCEEEEEETTTTEEEEEETTCCCTTTTTCSEEEEEEECCCCSSCCSSEETTEEHH
T ss_pred HHHHHHHHHhcCCCCcEEEEeccCCCCceEEEeccccccccccccCCHhHhccCCceEEEEEecCcCCCCcceeccCCHH
Confidence 45666677775 6678888862 2 2244442111 232 4467777774 321 1124
Q ss_pred HHHHHHHHHHHhhh-CCCCCcEEEEEEeCCC
Q psy2936 75 KHSAVLFPHIEKTL-GIPKDRMYISYIDSST 104 (174)
Q Consensus 75 ~~s~aI~~~l~e~L-GIp~dRiyI~f~d~~~ 104 (174)
+++..|..+..+.- .+.+..++|.+.-++-
T Consensus 127 eLa~~L~~f~~~~~~~~~pK~i~IsLvGCsL 157 (254)
T 3pa8_A 127 SLSTEIEAAIDLAKEDISPKSIEINLLGCNM 157 (254)
T ss_dssp HHHHHHHHHHHHHTTTCCCSEEEEEEESSSC
T ss_pred HHHHHHHHHHHHHhhccCCCCceEEEEeecc
Confidence 55666555554433 5788999999999854
No 83
>3gxs_A Phenylacetate-coenzyme A ligase; APC62324.1, structural genomics, PSI-2, protein structure initiative; 1.43A {Bacteroides vulgatus atcc 8482} PDB: 3lax_A
Probab=34.72 E-value=1e+02 Score=20.58 Aligned_cols=45 Identities=4% Similarity=0.057 Sum_probs=32.3
Q ss_pred CCCCceeEEEEEEeecC--ChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEe
Q psy2936 52 GSDAPAAIASLMSIGKL--GTAENKKHSAVLFPHIEKTLGIPKDRMYISYID 101 (174)
Q Consensus 52 Gs~~P~a~veI~sig~~--~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d 101 (174)
+.+...+++++ -|.. ..+...++.+.|.+.+.+.+|+++ .|.|.+
T Consensus 42 ~~e~l~~~ve~--~~~~~~~~~~~~~l~~~i~~~l~~~~~~~~---~v~~v~ 88 (109)
T 3gxs_A 42 SNDEMTVEVEL--SQLFTDDYGRLQALTREITRQLKDEILVTP---RVKLVP 88 (109)
T ss_dssp TEEEEEEEEEE--CTTCCCCHHHHHHHHHHHHHHHHHHHSSCC---EEEEEC
T ss_pred CceEEEEEEEE--cCccccchhHHHHHHHHHHHHHHHhhCCce---EEEEEC
Confidence 44667888877 2322 135667899999999999999986 466665
No 84
>1rm6_A 4-hydroxybenzoyl-COA reductase alpha subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: d.41.1.1 d.133.1.1 PDB: 1sb3_A*
Probab=34.15 E-value=33 Score=31.98 Aligned_cols=41 Identities=15% Similarity=0.160 Sum_probs=31.1
Q ss_pred HHHHHHHHHhhhCCCCCcEEEEEEeCC--CCCeeecCceeccc
Q psy2936 77 SAVLFPHIEKTLGIPKDRMYISYIDSS--TDVVGYNGTTFHEI 117 (174)
Q Consensus 77 s~aI~~~l~e~LGIp~dRiyI~f~d~~--~~nwG~~G~T~~~l 117 (174)
...+.....+.||||.++|.|...|.+ +..+|..|+.....
T Consensus 486 ~T~~aQiaAe~Lgip~e~V~v~~~DT~~~p~~~~t~aSr~t~~ 528 (769)
T 1rm6_A 486 NTMASQVAAEVLGVRLSRIRVISADSALTPKDNGSYSSRVTFM 528 (769)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEESBTTTSCCCCCSCTTCHHHH
T ss_pred HHHHHHHHHHHhCCCHHHEEEecCCCCCCCCCCCCccchHHHH
Confidence 344788899999999999999999875 45566666555444
No 85
>3hy0_A Alanyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, protein biosynthesis, NUC binding, amino acid-binding, ATP-binding, metal-binding; HET: G5A EPE; 1.90A {Escherichia coli} PDB: 3hxz_A* 3hy1_A* 3hxv_A* 3hxu_A* 3hxw_A* 3hxx_A* 3hxy_A*
Probab=33.93 E-value=36 Score=29.96 Aligned_cols=29 Identities=14% Similarity=0.369 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHH--hhhCCCCCcEEEEEEe
Q psy2936 73 NKKHSAVLFPHIE--KTLGIPKDRMYISYID 101 (174)
Q Consensus 73 n~~~s~aI~~~l~--e~LGIp~dRiyI~f~d 101 (174)
+++-.+---++|. +.||+|++|+||+++.
T Consensus 103 K~eAI~~Awe~LT~~~~lgl~~erL~vTvf~ 133 (441)
T 3hy0_A 103 KLDAILFAWLLLTSEKWFALPKERLWVTVYE 133 (441)
T ss_dssp HHHHHHHHHHHHHCTTTTCCCGGGEEEEEET
T ss_pred HHHHHHHHHHHhCCCCccCCCHHHeEEEEeC
Confidence 3444455567888 5599999999999764
No 86
>2hi1_A 4-hydroxythreonine-4-phosphate dehydrogenase 2; pyridoxal phosphate biosynthesis, structural GENO PSI-2, protein structure initiative; 2.30A {Salmonella typhimurium}
Probab=33.12 E-value=95 Score=26.10 Aligned_cols=80 Identities=18% Similarity=0.235 Sum_probs=47.3
Q ss_pred HHHHHHHHhCCCcceEEEEEeCCeeEEecCCCCceeEEEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeC
Q psy2936 23 TGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDS 102 (174)
Q Consensus 23 ls~~vaevlgKPe~~ImV~i~~~~~m~fgGs~~P~a~veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~ 102 (174)
=++.+++..|.+ +++|....++-+..+--+.-|.. .....++++.-.+..+.+.+ |.+.+||...||.|. -+
T Consensus 142 HTE~la~~~g~~-~~~Mml~~~~LrV~lvT~HipL~----~V~~~it~e~i~~~i~~~~~-L~~~fgi~~PrIaV~--GL 213 (330)
T 2hi1_A 142 HTELLATLTHSR-DYAMVLYTDKLKVIHVSTHIALR----KFLDTLSTARVETVIGIADT-FLKRVGYVKPRIAVA--GV 213 (330)
T ss_dssp HHHHHHHHTTCC-CCEEEEECSSCEEEESCCSSCHH----HHHHHCCHHHHHHHHHHHHH-HHHHTTCSSCEEEEE--CS
T ss_pred HHHHHHHHhCCC-CeEEEEecCCcEEEEeecCccHH----HHHHhcCHHHHHHHHHHHHH-HHHHcCCCCCCEEEE--ec
Confidence 356677777753 45555444433333322222322 11234788888888888888 999999999997654 44
Q ss_pred CCCCeeecC
Q psy2936 103 STDVVGYNG 111 (174)
Q Consensus 103 ~~~nwG~~G 111 (174)
+|| -|-+|
T Consensus 214 NPH-AGE~G 221 (330)
T 2hi1_A 214 NPH-AGENG 221 (330)
T ss_dssp SGG-GSSTT
T ss_pred CCC-CCCCC
Confidence 443 34444
No 87
>3n3k_B Ubiquitin; hydrolase, protease, thiol protease, DUB, zinc ribbon, inhibitor, ubiqu acetylation, cytoplasm, isopeptide bond, nucleus; 2.60A {Homo sapiens} SCOP: d.15.1.1
Probab=32.35 E-value=42 Score=21.14 Aligned_cols=24 Identities=21% Similarity=0.351 Sum_probs=19.1
Q ss_pred HHHHHHHHHhhhCCCCCcEEEEEE
Q psy2936 77 SAVLFPHIEKTLGIPKDRMYISYI 100 (174)
Q Consensus 77 s~aI~~~l~e~LGIp~dRiyI~f~ 100 (174)
.+.+.+.+++..|+|+++..+.|.
T Consensus 26 V~~lK~~i~~~~~ip~~~qrL~~~ 49 (85)
T 3n3k_B 26 IENVKAKIQDKEGIPPDQQRLIFA 49 (85)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEET
T ss_pred HHHHHHHHHHHHCCCHHHEEEEEC
Confidence 345677778889999999998883
No 88
>2ook_A Hypothetical protein; structural genomics, JOIN for structural genomics, JCSG, protein structure initiative unknown function; HET: MSE; 1.80A {Shewanella frigidimarina} SCOP: c.13.2.2
Probab=31.45 E-value=85 Score=22.03 Aligned_cols=47 Identities=15% Similarity=0.253 Sum_probs=34.8
Q ss_pred CceeEEEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeC
Q psy2936 55 APAAIASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDS 102 (174)
Q Consensus 55 ~P~a~veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~ 102 (174)
.+-.++.+...|.++.+..+++...+-+.+++ .+.++=|+++.+.+.
T Consensus 17 ~~~~vl~v~~~G~lt~eD~~~l~~~i~~~l~~-~~~~~i~lL~~~~~f 63 (127)
T 2ook_A 17 ESVFFVTLKAIGTLTHEDYLVITPMLEGALSQ-VDQPKVSLFLDATEL 63 (127)
T ss_dssp TTEEEEEEEEEEEECHHHHHHHHHHHHHHHTT-CCCSSCCEEEEEEEE
T ss_pred CCCCEEEEEEeeeECHHHHHHHHHHHHHHHhh-ccCCCEEEEEEccCC
Confidence 46667899999999998888777776666664 124566788888775
No 89
>2w3s_B Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 1jrp_B* 2w3r_B* 1jro_B* 2w54_B* 2w55_B*
Probab=30.70 E-value=36 Score=31.78 Aligned_cols=45 Identities=18% Similarity=0.190 Sum_probs=33.6
Q ss_pred HHHHHHHHHhhhCCCCCcEEEEEEeCC--CCCeeecCceecccccCc
Q psy2936 77 SAVLFPHIEKTLGIPKDRMYISYIDSS--TDVVGYNGTTFHEIFGGP 121 (174)
Q Consensus 77 s~aI~~~l~e~LGIp~dRiyI~f~d~~--~~nwG~~G~T~~~l~~~~ 121 (174)
...+.....+.||||.++|.|...|.+ +..+|..|+......+.+
T Consensus 493 ~T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~~t~aSr~t~~~G~A 539 (777)
T 2w3s_B 493 HAKMVQVAAAVLGIDPVQVRITATDTSKVPNTSATAASSGADMNGMA 539 (777)
T ss_dssp HHHHHHHHHHHHTSCGGGEEECCEETTTSCSCCCSCTTCHHHHHHHH
T ss_pred hHHHHHHHHHHHCCCHHHEEEEcCCCCCCCCCCCCccchHHHHHHHH
Confidence 345788899999999999999999875 556666666655553333
No 90
>3a9j_A Ubiquitin; protein complex, cytoplasm, isopeptide bond, metal-binding, zinc; 1.18A {Mus musculus} PDB: 3a1q_B 2znv_B 3a9k_A 3h7p_A 3jsv_A 3dvg_Y 3dvn_Y 3nob_A 2o6v_D* 3jw0_X 3jvz_X 3nhe_B* 1aar_A 1d3z_A 1f9j_A 1fxt_B 1g6j_A 1nbf_C 1cmx_B 1q5w_B ...
Probab=30.34 E-value=50 Score=20.12 Aligned_cols=22 Identities=23% Similarity=0.422 Sum_probs=18.0
Q ss_pred HHHHHHHHhhhCCCCCcEEEEE
Q psy2936 78 AVLFPHIEKTLGIPKDRMYISY 99 (174)
Q Consensus 78 ~aI~~~l~e~LGIp~dRiyI~f 99 (174)
+.+.+.+++..|+|+++..+.|
T Consensus 24 ~~lK~~i~~~~~i~~~~q~L~~ 45 (76)
T 3a9j_A 24 ENVKAKIQDKEGIPPDQQRLIF 45 (76)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEE
T ss_pred HHHHHHHHHHHCcCHHHeEEEE
Confidence 4466677778899999999987
No 91
>1ndd_A NEDD8, protein (ubiquitin-like protein NEDD8); proteolysis, signaling protei; 1.60A {Homo sapiens} SCOP: d.15.1.1 PDB: 1r4m_I 1r4n_I* 1xt9_B 2ko3_A 3gzn_I* 2bkr_B 2nvu_I* 3dqv_A 1bt0_A
Probab=29.69 E-value=52 Score=20.04 Aligned_cols=22 Identities=23% Similarity=0.437 Sum_probs=18.1
Q ss_pred HHHHHHHHhhhCCCCCcEEEEE
Q psy2936 78 AVLFPHIEKTLGIPKDRMYISY 99 (174)
Q Consensus 78 ~aI~~~l~e~LGIp~dRiyI~f 99 (174)
+.+.+.+++..|+|+++..+.|
T Consensus 24 ~~lK~~i~~~~~i~~~~q~L~~ 45 (76)
T 1ndd_A 24 ERIKERVEEKEGIPPQQQRLIY 45 (76)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEE
T ss_pred HHHHHHHHHHHCcChHHEEEEE
Confidence 4566777788999999999887
No 92
>1n62_B Carbon monoxide dehydrogenase large chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: d.41.1.1 d.133.1.1 PDB: 1n5w_B* 1n61_B* 1n60_B* 1n63_B* 1zxi_B*
Probab=28.58 E-value=49 Score=30.94 Aligned_cols=40 Identities=23% Similarity=0.272 Sum_probs=29.4
Q ss_pred HHHHHHHHhhhCCCCCcEEEEEEeCC--CCCeeecCceeccc
Q psy2936 78 AVLFPHIEKTLGIPKDRMYISYIDSS--TDVVGYNGTTFHEI 117 (174)
Q Consensus 78 ~aI~~~l~e~LGIp~dRiyI~f~d~~--~~nwG~~G~T~~~l 117 (174)
..+.....++||||.++|.|...|.+ +..+|..|+.....
T Consensus 534 T~~aQiaAe~LGip~e~V~v~~~DT~~~p~~~~t~aSr~t~~ 575 (809)
T 1n62_B 534 TTYAQIIATELGIPADDIMIEEGNTDTAPYGLGTYGSRSTPT 575 (809)
T ss_dssp HHHHHHHHHHHTCCGGGEEEECCBTTTSCCCCCSCTTCTTTT
T ss_pred HHHHHHHHHHhCCCHHHEEEecCCCCCCCCCCCcccchHHHH
Confidence 44788889999999999999999874 34455555544444
No 93
>1wh3_A 59 kDa 2'-5'-oligoadenylate synthetase like protein; P59 OASL, ubiquitin family, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=28.58 E-value=64 Score=20.47 Aligned_cols=22 Identities=27% Similarity=0.475 Sum_probs=18.2
Q ss_pred HHHHHHHHhhhCCCCCcEEEEE
Q psy2936 78 AVLFPHIEKTLGIPKDRMYISY 99 (174)
Q Consensus 78 ~aI~~~l~e~LGIp~dRiyI~f 99 (174)
+.+.+.+++..|+|+++..+.|
T Consensus 31 ~~lK~~i~~~~gi~~~~qrL~~ 52 (87)
T 1wh3_A 31 LGLKQQIEDQQGLPKKQQQLEF 52 (87)
T ss_dssp HHHHHHHHHHTCCCTTTEEEEE
T ss_pred HHHHHHHHHHhCCChHHEEEEE
Confidence 4567777888999999999886
No 94
>3mtn_B UBA80, ubcep1, ubiquitin variant UBV.21.4; ubiquitin-specific protease activity, hydrolase, ubiquitin B structural genomics consortium, SGC; 2.70A {Homo sapiens} SCOP: d.15.1.1
Probab=28.54 E-value=46 Score=20.90 Aligned_cols=23 Identities=22% Similarity=0.378 Sum_probs=18.5
Q ss_pred HHHHHHHHHhhhCCCCCcEEEEE
Q psy2936 77 SAVLFPHIEKTLGIPKDRMYISY 99 (174)
Q Consensus 77 s~aI~~~l~e~LGIp~dRiyI~f 99 (174)
...+.+.+++..|+|+++..+.|
T Consensus 26 V~~lK~~i~~~~~i~~~~qrL~~ 48 (85)
T 3mtn_B 26 IENVKAKIQDKEGIPPDQQRLIF 48 (85)
T ss_dssp HHHHHHHHHHHHCCCGGGCEEEE
T ss_pred HHHHHHHHHHHHCcChHHEEEEE
Confidence 44567777888999999998876
No 95
>2z5b_A Protein YPL144W, DMP1; proteasome, chaperone; 1.96A {Saccharomyces cerevisiae} PDB: 2z5c_A
Probab=27.68 E-value=1.3e+02 Score=22.47 Aligned_cols=58 Identities=14% Similarity=0.321 Sum_probs=38.0
Q ss_pred CCchhhHHHHHHHHHHHHhCCCcceEEEEEeCCeeEEecCCCCceeEEEEEEeecCChHHHHHHHHHHHHHHHhhhC
Q psy2936 13 EKIPANFGKETGALVAKTLGKPENYVAVIVVPDVNLVFGGSDAPAAIASLMSIGKLGTAENKKHSAVLFPHIEKTLG 89 (174)
Q Consensus 13 ~~~~~~f~~~ls~~vaevlgKPe~~ImV~i~~~~~m~fgGs~~P~a~veI~sig~~~~e~n~~~s~aI~~~l~e~LG 89 (174)
++...+|..++++++|+.+++| .||....... ..+ ....++--+..+++-+.+.++||
T Consensus 93 ~~~~~D~a~rlAkiLarR~~~P-~YVg~S~~~s--------~~g----------~m~veeeme~lkk~Vd~v~~~~~ 150 (151)
T 2z5b_A 93 DDRIRDMARHMATIISERFNRP-CYVTWSSLPS--------EDP----------SMLVANHLYILKKCLDLLKTELG 150 (151)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSC-EEEEEEECTT--------CCT----------HHHHHTHHHHHHHHHHHHHHHHC
T ss_pred CccHHHHHHHHHHHHHHHhCCC-eEEEeecccc--------ccc----------cchHHHHHHHHHHHHHHHHHHhc
Confidence 4456799999999999999997 3554444332 111 01124445555788888888887
No 96
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=26.94 E-value=21 Score=25.72 Aligned_cols=13 Identities=38% Similarity=0.866 Sum_probs=10.8
Q ss_pred CCCceEEEeeccC
Q psy2936 161 YLNPYVVRISLPL 173 (174)
Q Consensus 161 ~~~~~~~~~~~~~ 173 (174)
|++||..|+.||-
T Consensus 57 ~~~PYyLRL~lP~ 69 (115)
T 3eud_A 57 HLSPYYLRLRFPH 69 (115)
T ss_dssp EETTEEEEEECSS
T ss_pred ecCCeEEEEecCc
Confidence 6789999998883
No 97
>1ffv_B CUTL, molybdoprotein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: d.41.1.1 d.133.1.1 PDB: 1ffu_B*
Probab=26.90 E-value=46 Score=31.18 Aligned_cols=41 Identities=22% Similarity=0.285 Sum_probs=30.3
Q ss_pred HHHHHHHHHhhhCCCCCcEEEEEEeCC--CCCeeecCceeccc
Q psy2936 77 SAVLFPHIEKTLGIPKDRMYISYIDSS--TDVVGYNGTTFHEI 117 (174)
Q Consensus 77 s~aI~~~l~e~LGIp~dRiyI~f~d~~--~~nwG~~G~T~~~l 117 (174)
...+.....+.||||.++|.|...|.+ +..+|..|+.....
T Consensus 527 ~T~~aQiaAe~LGi~~e~V~v~~~DT~~~p~~~~t~aSr~t~~ 569 (803)
T 1ffv_B 527 QTTYAQIIATELGIPSEVIQVEEGDTSTAPYGLGTYGSRSTPV 569 (803)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEECCBTTTSCCCCCSCTTCHHHH
T ss_pred HHHHHHHHHHHHCCCHHHEEEecCCCCCCCCCCCcccchHHHH
Confidence 345788899999999999999999875 44555555554444
No 98
>1t0a_A 2C-methyl-D-erythritol 2,4-cyclodiphosphate synth; mixed alpha beta, homotrimer, synthase, lyase; HET: FPP; 1.60A {Shewanella oneidensis} SCOP: d.79.5.1 PDB: 1vh8_A* 1vha_A* 1jn1_A 3fpi_A* 3f6m_A*
Probab=26.85 E-value=37 Score=25.78 Aligned_cols=49 Identities=10% Similarity=0.179 Sum_probs=34.6
Q ss_pred EEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCc
Q psy2936 60 ASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGT 112 (174)
Q Consensus 60 veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~ 112 (174)
+.++.++... +-..+..++.+.+.+.||++.++|.|.-+-. +..|+-|+
T Consensus 96 vD~tii~q~P--Ki~p~~~~m~~~ia~~L~~~~~~V~vKAtT~--E~LGf~Gr 144 (159)
T 1t0a_A 96 LDVTIIAQAP--KMAPHIEDMRQVLAADLNADVADINVKATTT--EKLGFTGR 144 (159)
T ss_dssp EEEEEECSSS--CCGGGHHHHHHHHHHHTTCCGGGEEEEEECC--TTCHHHHT
T ss_pred EEEEEEcCCC--cChHHHHHHHHHHHHHhCCCCceEEEEEecC--CCCCcccC
Confidence 3455555432 1233557788899999999999999998886 66776664
No 99
>2pmp_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate SYNT; plant enzymes, MEP pathway, isoprenoid proteins, CMP, zinc IONS, lyase; HET: C5P; 2.30A {Arabidopsis thaliana}
Probab=26.66 E-value=37 Score=25.78 Aligned_cols=49 Identities=14% Similarity=0.101 Sum_probs=34.5
Q ss_pred EEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCc
Q psy2936 60 ASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGT 112 (174)
Q Consensus 60 veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~ 112 (174)
+.++.+.... +-..+..++.+.+.+.||++.++|.|.-+-. +..|+-|+
T Consensus 97 vD~tii~q~P--Ki~p~~~~m~~~ia~~L~~~~~~V~vKAtT~--E~LGf~Gr 145 (160)
T 2pmp_A 97 LDATLILQRP--KISPHKETIRSNLSKLLGADPSVVNLKAKTH--EKVDSLGE 145 (160)
T ss_dssp EEEEEECSSS--CCGGGHHHHHHHHHHHHTCCGGGEEEEEECC--TTCHHHHT
T ss_pred EEEEEEecCC--cCHHHHHHHHHHHHHHHCCCcceEEEEEecC--CCCCcccC
Confidence 4455555432 1234567788889999999999999999876 66776554
No 100
>2q3l_A Uncharacterized protein; SPOIIAA-like fold, structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE; 2.25A {Shewanella loihica pv-4} SCOP: c.13.2.2
Probab=26.55 E-value=94 Score=21.75 Aligned_cols=47 Identities=13% Similarity=0.175 Sum_probs=31.2
Q ss_pred CceeEEEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeC
Q psy2936 55 APAAIASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDS 102 (174)
Q Consensus 55 ~P~a~veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~ 102 (174)
.+-.++.+...|.++.+..+++...+-+.+++. +-|.=|+++.+.+.
T Consensus 17 ~~~~vl~v~~~G~lt~~d~~~l~~~l~~~l~~~-~~~~i~ll~~~~~f 63 (126)
T 2q3l_A 17 QDDFYLAFKAVGKLTHEDYEQMTPLLESALAGI-KTPEIVALIDITEL 63 (126)
T ss_dssp TTEEEEEEEEEEEECHHHHHHHHHHHHHHTTTC-CSSCEEEEEEEEEE
T ss_pred CCCCEEEEEEEeeECHHHHHHHHHHHHHHHHhC-CCceEEEEEEecCC
Confidence 366678999999999988877666655555531 22225666666554
No 101
>1oey_A P67-PHOX, neutrophil cytosol factor 2; immune system, PB1 heterodimer/complex, NADPH oxidase, PB1 D heterodimerization; 2.0A {Homo sapiens} SCOP: d.15.2.2
Probab=26.53 E-value=42 Score=22.62 Aligned_cols=33 Identities=12% Similarity=0.102 Sum_probs=26.3
Q ss_pred HHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecC
Q psy2936 79 VLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNG 111 (174)
Q Consensus 79 aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G 111 (174)
.+.+.+.+.|+++++.+-+.|.+-+...|-..+
T Consensus 28 ~L~~~l~~kL~l~~~~~~LsYk~~~s~~~vi~~ 60 (83)
T 1oey_A 28 QVRDMVSKKLELRLEHTKLSYRPRDSNELVPLS 60 (83)
T ss_dssp HHHHHHHHHTTCCGGGCCEEECCTTCSSCEECC
T ss_pred HHHHHHHHHhCCCcceeEEEeeCCCCCCeeccC
Confidence 367888999999999999999997666655333
No 102
>1wxv_A BAG-family molecular chaperone regulator-1; structural genomics, apoptosis, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=26.45 E-value=62 Score=21.04 Aligned_cols=22 Identities=18% Similarity=0.398 Sum_probs=18.5
Q ss_pred HHHHHHHHhhhCCCCCcEEEEE
Q psy2936 78 AVLFPHIEKTLGIPKDRMYISY 99 (174)
Q Consensus 78 ~aI~~~l~e~LGIp~dRiyI~f 99 (174)
..+.+.+++..|||+++..+.|
T Consensus 35 ~~LK~~i~~~~gip~~~qrL~~ 56 (92)
T 1wxv_A 35 QDLAQVVEEVIGVPQSFQKLIF 56 (92)
T ss_dssp HHHHHHHHHHTCCCTTTCEEEE
T ss_pred HHHHHHHHHHHCcCHHHEEEEE
Confidence 4577778888999999999986
No 103
>2dzi_A Ubiquitin-like protein 4A; GDX, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.06 E-value=66 Score=19.93 Aligned_cols=22 Identities=14% Similarity=0.333 Sum_probs=17.8
Q ss_pred HHHHHHHHhhhCCCCCcEEEEE
Q psy2936 78 AVLFPHIEKTLGIPKDRMYISY 99 (174)
Q Consensus 78 ~aI~~~l~e~LGIp~dRiyI~f 99 (174)
+.+.+.+++..|+|+++..+.|
T Consensus 31 ~~LK~~i~~~~~i~~~~qrL~~ 52 (81)
T 2dzi_A 31 STLKQLVSEKLNVPVRQQRLLF 52 (81)
T ss_dssp HHHHHHHHHHTCCCTTTCEEEE
T ss_pred HHHHHHHHHHHCcCHHHEEEEE
Confidence 4466677788999999999887
No 104
>2faz_A Ubiquitin-like containing PHD and ring finger DOM protein 1; cell cycle, DNA damage, DNA repair, DNA-binding, ligase, Met binding, nuclear protein; 2.00A {Homo sapiens} SCOP: d.15.1.1
Probab=25.63 E-value=66 Score=19.93 Aligned_cols=22 Identities=14% Similarity=0.149 Sum_probs=17.9
Q ss_pred HHHHHHHHhhhCCCCCcEEEEE
Q psy2936 78 AVLFPHIEKTLGIPKDRMYISY 99 (174)
Q Consensus 78 ~aI~~~l~e~LGIp~dRiyI~f 99 (174)
+.+.+.+++..|+|+++..+.|
T Consensus 28 ~~lK~~i~~~~gip~~~qrL~~ 49 (78)
T 2faz_A 28 EELRRKIQELFHVEPGLQRLFY 49 (78)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEE
T ss_pred HHHHHHHHHHHCcChhhEEEEE
Confidence 4466677788899999999987
No 105
>1wy8_A NP95-like ring finger protein, isoform A; ubiquitin-like domain, NP95/ICBP90-like ring finger (NIRF), ubiquitin ligase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=25.53 E-value=75 Score=20.27 Aligned_cols=22 Identities=9% Similarity=0.083 Sum_probs=18.2
Q ss_pred HHHHHHHHhhhCCCCCcEEEEE
Q psy2936 78 AVLFPHIEKTLGIPKDRMYISY 99 (174)
Q Consensus 78 ~aI~~~l~e~LGIp~dRiyI~f 99 (174)
+.+.+.+++..|+|+++..+.|
T Consensus 33 ~~lK~~i~~~~gip~~~qrL~~ 54 (89)
T 1wy8_A 33 EELRERVWALFDVRPECQRLFY 54 (89)
T ss_dssp HHHHHHHHHHSCCCTTTEEEEE
T ss_pred HHHHHHHHHHHCcChhhEEEEE
Confidence 4567777888999999999887
No 106
>1gx1_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; isoprenoid, lyase, isoprene biosynthesis; HET: CDP; 1.8A {Escherichia coli} SCOP: d.79.5.1 PDB: 1h47_A* 1h48_A* 3ern_A* 3eor_A* 3elc_A* 3esj_A* 3fba_A* 2amt_A* 1knj_A* 1knk_A 1u3l_A* 1u3p_A 1u40_A* 1u43_A* 1jy8_A* 2gzl_A* 1yqn_A* 3ghz_A* 3t80_A*
Probab=25.50 E-value=40 Score=25.59 Aligned_cols=49 Identities=16% Similarity=0.276 Sum_probs=34.9
Q ss_pred EEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCc
Q psy2936 60 ASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGT 112 (174)
Q Consensus 60 veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~ 112 (174)
+.++.+.... +-..+..++.+.+.+.||++.++|.|.-+-. +..|+-|+
T Consensus 95 vD~tii~q~P--Ki~p~~~~m~~~ia~~L~~~~~~V~vKAtT~--E~LGf~Gr 143 (160)
T 1gx1_A 95 VDVTIIAQAP--KMLPHIPQMRVFIAEDLGCHMDDVNVKATTT--EKLGFTGR 143 (160)
T ss_dssp EEEEEECSSS--CCGGGHHHHHHHHHHHTTCCGGGEEEEEECC--TTCHHHHT
T ss_pred EEEEEEcCCC--cchHHHHHHHHHHHHHhCCCCceEEEEEccC--CCCCcccC
Confidence 4455555432 1133557788889999999999999998886 66776664
No 107
>3re3_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate SYNT; structural genomics, center for structural genomics of infec diseases, csgid; 2.65A {Francisella tularensis subsp} SCOP: d.79.5.0
Probab=25.45 E-value=40 Score=25.68 Aligned_cols=50 Identities=14% Similarity=0.170 Sum_probs=35.2
Q ss_pred EEEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCc
Q psy2936 59 IASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGT 112 (174)
Q Consensus 59 ~veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~ 112 (174)
-+.++.++... +-..+..++.+.+.+.||++.++|.|..+-. +..|+-|+
T Consensus 99 NvD~tii~q~P--Kl~p~~~~m~~~la~~L~~~~~~V~vKAtT~--E~LGf~Gr 148 (162)
T 3re3_A 99 NIDCTIIAQAP--KMLPHIEKMRACLANILEIQISQINIKATTT--ERLGFIGR 148 (162)
T ss_dssp EEEEEEECSSS--CCGGGHHHHHHHHHHHHTSCGGGEEEEEECC--SSCHHHHT
T ss_pred EEEEEEEcCCC--cchhHHHHHHHHHHHHHCCCCceEEEEEecC--CCcCCCcc
Confidence 34555566432 1234567788889999999999999999876 66666554
No 108
>3nvz_C Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, indole-3-aldehyde, oxidoreductase; HET: FAD MTE I3A; 1.60A {Bos taurus} PDB: 3ns1_C* 3etr_C* 3nvv_C* 3nvw_C* 3nrz_C* 3nvy_C* 3eub_C* 3b9j_C* 1fiq_C* 3rca_C* 3sr6_C*
Probab=25.05 E-value=42 Score=31.20 Aligned_cols=40 Identities=20% Similarity=0.291 Sum_probs=29.7
Q ss_pred HHHHHHHHhhhCCCCCcEEEEEEeC--CCCCeeecCceeccc
Q psy2936 78 AVLFPHIEKTLGIPKDRMYISYIDS--STDVVGYNGTTFHEI 117 (174)
Q Consensus 78 ~aI~~~l~e~LGIp~dRiyI~f~d~--~~~nwG~~G~T~~~l 117 (174)
..+.....+.||||.++|.|...|. .+..+|..|+.....
T Consensus 474 T~~aQiaAe~Lgi~~e~V~v~~~DT~~~p~~~~t~aSr~t~~ 515 (755)
T 3nvz_C 474 TKMVQVASKALKIPISKIYISETSTNTVPNSSPTAASVSTDI 515 (755)
T ss_dssp HHHHHHHHHHHTSCGGGEECCCEETTTSCSCCCSCTTCHHHH
T ss_pred HHHHHHHHHHHCCCHHHEEEECCCCCCCCCCCCCchhHHHHH
Confidence 4477888899999999999998875 355566666655444
No 109
>2kd0_A LRR repeats and ubiquitin-like domain-containing protein AT2G30105; ubiquitin-like protein, NESG, leucine-rich repeat, structural genomics; NMR {Arabidopsis thaliana}
Probab=24.66 E-value=71 Score=20.66 Aligned_cols=22 Identities=5% Similarity=0.052 Sum_probs=17.8
Q ss_pred HHHHHHHHhhhCCCCCcEEEEE
Q psy2936 78 AVLFPHIEKTLGIPKDRMYISY 99 (174)
Q Consensus 78 ~aI~~~l~e~LGIp~dRiyI~f 99 (174)
..+.+.+++..|+|+++..+.|
T Consensus 35 ~~LK~~I~~~~gip~~~qrL~~ 56 (85)
T 2kd0_A 35 KDLKSQLQPITNVLPRGQKLIF 56 (85)
T ss_dssp HHHHHHHHHHHCCCTTTCEEEE
T ss_pred HHHHHHHHHHHCcChHHEEEEE
Confidence 4466777778899999999876
No 110
>2bwf_A Ubiquitin-like protein DSK2; signaling protein, UBA, signaling proteins; 1.15A {Saccharomyces cerevisiae} SCOP: d.15.1.1 PDB: 2bwe_S
Probab=24.41 E-value=73 Score=19.52 Aligned_cols=22 Identities=27% Similarity=0.348 Sum_probs=17.6
Q ss_pred HHHHHHHHhhhCCCCCcEEEEE
Q psy2936 78 AVLFPHIEKTLGIPKDRMYISY 99 (174)
Q Consensus 78 ~aI~~~l~e~LGIp~dRiyI~f 99 (174)
+.+.+.+++..|+|+++..+.|
T Consensus 27 ~~LK~~i~~~~~i~~~~qrL~~ 48 (77)
T 2bwf_A 27 LQFKEAINKANGIPVANQRLIY 48 (77)
T ss_dssp HHHHHHHHHHHCCCGGGEEEEE
T ss_pred HHHHHHHHHHhCCCHHHEEEEE
Confidence 4466677778899999999886
No 111
>2daf_A FLJ35834 protein; hypothetical protein FLJ35834, ubiquitin-like domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=24.30 E-value=72 Score=22.90 Aligned_cols=22 Identities=36% Similarity=0.570 Sum_probs=17.7
Q ss_pred HHHHHHHhhhCCCCCcEEEEEE
Q psy2936 79 VLFPHIEKTLGIPKDRMYISYI 100 (174)
Q Consensus 79 aI~~~l~e~LGIp~dRiyI~f~ 100 (174)
.+-+.+++.+++|+++..+.|.
T Consensus 41 dLKe~ls~~~~iP~e~qrLIy~ 62 (118)
T 2daf_A 41 YLKDHFSHLLGIPHSVLQIRYS 62 (118)
T ss_dssp HHHHHHHHHHTCCTTTEEEEET
T ss_pred HHHHHHHhhhCCChHHEEEEEC
Confidence 3566777788999999998874
No 112
>3phx_B Ubiquitin-like protein ISG15; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase-protein complex; 1.60A {Homo sapiens}
Probab=24.20 E-value=72 Score=19.85 Aligned_cols=23 Identities=17% Similarity=0.390 Sum_probs=18.0
Q ss_pred HHHHHHHHHhhhCCCCCcEEEEE
Q psy2936 77 SAVLFPHIEKTLGIPKDRMYISY 99 (174)
Q Consensus 77 s~aI~~~l~e~LGIp~dRiyI~f 99 (174)
.+.+.+.+++..|+|+++..+.|
T Consensus 27 V~~lK~~i~~~~gip~~~qrL~~ 49 (79)
T 3phx_B 27 VAHLKQQVSGLEGVQDDLFWLTF 49 (79)
T ss_dssp HHHHHHHHHHHHTCCGGGEEEEE
T ss_pred HHHHHHHHHhhcCCCHHHEEEEE
Confidence 34466677788899999998876
No 113
>4b6w_A Tubulin-specific chaperone; CAP-Gly, ubiquitin-like; HET: MSE; 2.35A {Trypanosoma brucei brucei strain 927}
Probab=24.02 E-value=90 Score=20.51 Aligned_cols=26 Identities=15% Similarity=0.291 Sum_probs=21.7
Q ss_pred HHHHHHHHhhhCCCCCcEEEEEEeCC
Q psy2936 78 AVLFPHIEKTLGIPKDRMYISYIDSS 103 (174)
Q Consensus 78 ~aI~~~l~e~LGIp~dRiyI~f~d~~ 103 (174)
..+-+.+++..|||++...+.|.+-+
T Consensus 28 ~~lK~ki~~~~Gip~~~QrLi~~~~~ 53 (86)
T 4b6w_A 28 ESIKENVFTHFATPPEYMQLQLIDDR 53 (86)
T ss_dssp HHHHHHHHTTSCCCGGGEEEEEECTT
T ss_pred HHHHHHHHHHHCCCHHHEEEEEecCC
Confidence 34677889999999999999998653
No 114
>2kjr_A CG11242; UBL, ubiquitin, ubiquitin-like, structural genomics, PSI-2, protein structure initiative; NMR {Drosophila melanogaster}
Probab=23.78 E-value=1e+02 Score=20.72 Aligned_cols=24 Identities=21% Similarity=0.119 Sum_probs=20.7
Q ss_pred HHHHHHHHhhhCCCCCcEEEEEEe
Q psy2936 78 AVLFPHIEKTLGIPKDRMYISYID 101 (174)
Q Consensus 78 ~aI~~~l~e~LGIp~dRiyI~f~d 101 (174)
+.+.+.+++..|||+++..+.|.+
T Consensus 41 ~~LK~kI~~~~GiP~~~QrL~~~~ 64 (95)
T 2kjr_A 41 AQLKTKLEILTGGCAGTMKVQVFK 64 (95)
T ss_dssp HHHHHHHHHHHCSCTTTEEEEEEE
T ss_pred HHHHHHHHHHHCcCHHHeEEEEec
Confidence 447778888999999999999986
No 115
>3f0d_A 2-C-methyl-D-erythritol 2,4-cyclodiphosphate SYNT; ssgcid, niaid, isoprene biosynthe lyase, metal-binding, structural genomics; 1.20A {Burkholderia pseudomallei} PDB: 3f0e_A 3f0f_A* 3f0g_A* 3ieq_A* 3iew_A* 3jvh_A* 3k14_A* 3k2x_A* 3ke1_A* 3mbm_A* 3p0z_A* 3p10_A* 3q8h_A* 3qhd_A* 3ikf_A* 3ike_A*
Probab=23.75 E-value=45 Score=25.88 Aligned_cols=49 Identities=20% Similarity=0.325 Sum_probs=34.7
Q ss_pred EEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCc
Q psy2936 60 ASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGT 112 (174)
Q Consensus 60 veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~ 112 (174)
+.++.++... +-..+..++.+.|.+.||++.++|.|..+-. +..|+-|+
T Consensus 117 vD~tIiaq~P--Kl~p~~~~mr~~la~~L~i~~~~VnVKATT~--E~LGf~Gr 165 (183)
T 3f0d_A 117 VDSTIIAQAP--KLAPHIDAMRANIAADLDLPLDRVNVKAKTN--EKLGYLGR 165 (183)
T ss_dssp EEEEEECSSS--CCGGGHHHHHHHHHHHHTCCGGGEEEEEECC--TTCHHHHT
T ss_pred EEEEEEcCCC--cchhHHHHHHHHHHHHHCCCcceEEEEEecC--CCCccCcC
Confidence 4455565432 1133567788889999999999999999886 66676554
No 116
>1sif_A Ubiquitin; hydrophobic mutants, folding, stability, structural protein; 2.18A {Homo sapiens} SCOP: d.15.1.1
Probab=23.37 E-value=64 Score=20.91 Aligned_cols=22 Identities=27% Similarity=0.455 Sum_probs=18.1
Q ss_pred HHHHHHHHhhhCCCCCcEEEEE
Q psy2936 78 AVLFPHIEKTLGIPKDRMYISY 99 (174)
Q Consensus 78 ~aI~~~l~e~LGIp~dRiyI~f 99 (174)
+.+.+.+++..|+|+++..+.|
T Consensus 33 ~~LK~~I~~~~gip~~~qrL~~ 54 (88)
T 1sif_A 33 ENLKAKIQDKEGIPPDQQRLIF 54 (88)
T ss_dssp HHHHHHHHHHHCCCGGGCEEEE
T ss_pred HHHHHHHHHHHCcChhhEEEEE
Confidence 4566777788999999999987
No 117
>3k9o_B Ubiquitin, UBB+1; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 2k25_A 2kx0_A
Probab=23.30 E-value=74 Score=20.63 Aligned_cols=23 Identities=22% Similarity=0.378 Sum_probs=18.6
Q ss_pred HHHHHHHHHhhhCCCCCcEEEEE
Q psy2936 77 SAVLFPHIEKTLGIPKDRMYISY 99 (174)
Q Consensus 77 s~aI~~~l~e~LGIp~dRiyI~f 99 (174)
...+.+.+++..|+|+++..+.|
T Consensus 24 V~~LK~~i~~~~gip~~~qrL~~ 46 (96)
T 3k9o_B 24 IENVKAKIQDKEGIPPDQQRLIF 46 (96)
T ss_dssp HHHHHHHHHHHHCCCGGGEEEEE
T ss_pred HHHHHHHHHhhhCCChhHEEEEE
Confidence 34567777888899999998887
No 118
>2kan_A Uncharacterized protein AR3433A; ubiquitin fold, alpha+beta, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=22.81 E-value=85 Score=20.78 Aligned_cols=22 Identities=27% Similarity=0.335 Sum_probs=18.1
Q ss_pred HHHHHHHHhhhCCCCCcEEEEE
Q psy2936 78 AVLFPHIEKTLGIPKDRMYISY 99 (174)
Q Consensus 78 ~aI~~~l~e~LGIp~dRiyI~f 99 (174)
..+.+.+++..|+|+++..+.|
T Consensus 38 ~~LK~~I~~~~gip~~~QrLi~ 59 (94)
T 2kan_A 38 SSLKDKIHIVENTPIKRMQLYY 59 (94)
T ss_dssp HHHHHHHHHHSSSCTTTEEEEE
T ss_pred HHHHHHHHHHHCcCHHHEEEEE
Confidence 4567778888999999999976
No 119
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=22.61 E-value=1e+02 Score=25.32 Aligned_cols=30 Identities=7% Similarity=0.088 Sum_probs=25.0
Q ss_pred CChHHHHHHHHHHHHHHHhhhCCCCCcEEE
Q psy2936 68 LGTAENKKHSAVLFPHIEKTLGIPKDRMYI 97 (174)
Q Consensus 68 ~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI 97 (174)
.+.+++.++++.+.+.+.++.||++++|++
T Consensus 148 ~t~~~~~~i~~r~~~~~~~~~Gi~~~~Iil 177 (300)
T 3k13_A 148 DTAARKIEVCERAYRLLVDKVGFNPHDIIF 177 (300)
T ss_dssp CSHHHHHHHHHHHHHHHHHHTCCCGGGEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHcCCCHHHEEE
Confidence 346778888999988887789999999876
No 120
>2kk8_A Uncharacterized protein AT4G05270; solution arabidopsis thaliana, uncharacterized putative protein, NESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=22.37 E-value=80 Score=20.43 Aligned_cols=23 Identities=22% Similarity=0.236 Sum_probs=18.7
Q ss_pred HHHHHHHHhhhCCCCCcEEEEEE
Q psy2936 78 AVLFPHIEKTLGIPKDRMYISYI 100 (174)
Q Consensus 78 ~aI~~~l~e~LGIp~dRiyI~f~ 100 (174)
+.+.+.+++..|+|+++..+.|.
T Consensus 34 ~~LK~~I~~~~gip~~~QrLi~~ 56 (84)
T 2kk8_A 34 LVVKQKIERSQHIPVSKQTLIVD 56 (84)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEET
T ss_pred HHHHHHHHHHHCcChHHEEEEEC
Confidence 45677788889999999999873
No 121
>2kj6_A Tubulin folding cofactor B; methods development, NESG, solution PSI-2, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=22.12 E-value=1.1e+02 Score=20.72 Aligned_cols=25 Identities=16% Similarity=0.206 Sum_probs=21.1
Q ss_pred HHHHHHHHhhhCCCCCcEEEEEEeC
Q psy2936 78 AVLFPHIEKTLGIPKDRMYISYIDS 102 (174)
Q Consensus 78 ~aI~~~l~e~LGIp~dRiyI~f~d~ 102 (174)
+.+.+.|++..|||+++..+.|..-
T Consensus 40 ~~LK~kIe~~~Gip~~~QrLi~~g~ 64 (97)
T 2kj6_A 40 EAVKEKLWKKCGTSVNSMALELYDD 64 (97)
T ss_dssp HHHHHHHHHHHCCCTTSEEEEEECS
T ss_pred HHHHHHHHHHHCcCHHHeEEEEecC
Confidence 4477788889999999999999763
No 122
>1wx7_A Ubiquilin 3; ubiquitin-like domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: d.15.1.1
Probab=21.47 E-value=98 Score=20.73 Aligned_cols=22 Identities=14% Similarity=0.256 Sum_probs=18.0
Q ss_pred HHHHHHHHhhhCCCCCcEEEEE
Q psy2936 78 AVLFPHIEKTLGIPKDRMYISY 99 (174)
Q Consensus 78 ~aI~~~l~e~LGIp~dRiyI~f 99 (174)
..|.+.+++..||++++..+.|
T Consensus 40 ~~LK~~I~~~~gip~~~qrLi~ 61 (106)
T 1wx7_A 40 QQLKEEISQRFKAHPDQLVLIF 61 (106)
T ss_dssp HHHHHHHHHHHTCCTTTEEEEE
T ss_pred HHHHHHHHHHHCcChhhEEEEE
Confidence 4567777788899999999876
No 123
>1t3q_B Quinoline 2-oxidoreductase large subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: d.41.1.1 d.133.1.1
Probab=21.36 E-value=48 Score=30.91 Aligned_cols=36 Identities=17% Similarity=0.229 Sum_probs=27.1
Q ss_pred HHHHHHHHHhhhCCCCCcEEEEEEeCCCCCeeecCceec
Q psy2936 77 SAVLFPHIEKTLGIPKDRMYISYIDSSTDVVGYNGTTFH 115 (174)
Q Consensus 77 s~aI~~~l~e~LGIp~dRiyI~f~d~~~~nwG~~G~T~~ 115 (174)
...+.....+.||||.++|.|...|.+ .-+.+.|.+
T Consensus 511 ~T~~aQiaAe~LGip~~~V~v~~~DT~---~p~~~~t~a 546 (788)
T 1t3q_B 511 ETTLAQIAADVLGVPASDVVIQAGSTK---NTYGFGAYA 546 (788)
T ss_dssp HHHHHHHHHHHHTSCGGGEEEECSBTT---SCCBCCSCT
T ss_pred HHHHHHHHHHHHCCCHHHEEEecCCCC---CCCCCCCcc
Confidence 344788889999999999999998874 344444553
No 124
>1yym_M F23, scorpion-toxin mimic of CD4, exterior membrane glycoprotein(GP120); HIV-1, YU2, CD4 mimic, antibody, protein-immune system complex; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: k.23.1.2 PDB: 1yyl_M* 2i60_M* 2i5y_M* 1d5q_A
Probab=21.21 E-value=13 Score=19.72 Aligned_cols=7 Identities=86% Similarity=1.194 Sum_probs=5.0
Q ss_pred eeeccCC
Q psy2936 151 SCGLLGK 157 (174)
Q Consensus 151 ~~~~~~~ 157 (174)
|.|||||
T Consensus 12 slgllgk 18 (27)
T 1yym_M 12 SLGLLGK 18 (27)
T ss_dssp TTTCCEE
T ss_pred hhhhhhh
Confidence 5678876
No 125
>1yx5_B Ubiquitin; proteasome, UIM, hydrolase; NMR {Homo sapiens} SCOP: d.15.1.1 PDB: 1yx6_B
Probab=21.11 E-value=86 Score=20.56 Aligned_cols=22 Identities=23% Similarity=0.422 Sum_probs=18.3
Q ss_pred HHHHHHHHhhhCCCCCcEEEEE
Q psy2936 78 AVLFPHIEKTLGIPKDRMYISY 99 (174)
Q Consensus 78 ~aI~~~l~e~LGIp~dRiyI~f 99 (174)
+.+.+.+++..|+|+++..+.|
T Consensus 24 ~~LK~~I~~~~gi~~~~qrL~~ 45 (98)
T 1yx5_B 24 ENVKAKIQDKEGIPPDQQRLIF 45 (98)
T ss_dssp HHHHHHHHHHTCCCGGGEEEEE
T ss_pred HHHHHHHHHHHCcChhhEEEEE
Confidence 4567777888999999999987
No 126
>4eew_A Large proline-rich protein BAG6; ubiquitin-like fold, GP78-binding, chaperone; 1.30A {Homo sapiens}
Probab=21.09 E-value=88 Score=19.92 Aligned_cols=22 Identities=23% Similarity=0.490 Sum_probs=17.4
Q ss_pred HHHHHHHHhhhCCCCCcEEEEE
Q psy2936 78 AVLFPHIEKTLGIPKDRMYISY 99 (174)
Q Consensus 78 ~aI~~~l~e~LGIp~dRiyI~f 99 (174)
+.+.+.+++..|+|+++..+.|
T Consensus 41 ~~lK~~i~~~~gip~~~qrLi~ 62 (88)
T 4eew_A 41 KEFKEHIAASVSIPSEKQRLIY 62 (88)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEE
T ss_pred HHHHHHHHHHhCCCHHHEEEEE
Confidence 3456667777899999998877
No 127
>2uyz_B Small ubiquitin-related modifier 1; sumoylation, cell division, nuclear protein, ubiquitin-like modifier, UBL conjugation pathway; 1.4A {Homo sapiens} SCOP: d.15.1.1 PDB: 2vrr_B 2iy0_B 2iy1_B 2g4d_B 2las_A 2io2_B 1z5s_B 3uip_B* 1tgz_B* 2bf8_B
Probab=21.08 E-value=84 Score=19.52 Aligned_cols=20 Identities=15% Similarity=0.316 Sum_probs=16.3
Q ss_pred HHHHHHhhhCCCCCcEEEEE
Q psy2936 80 LFPHIEKTLGIPKDRMYISY 99 (174)
Q Consensus 80 I~~~l~e~LGIp~dRiyI~f 99 (174)
+.+.+++..|+|+++..+.|
T Consensus 29 lk~~i~~~~gi~~~~qrL~~ 48 (79)
T 2uyz_B 29 LKESYCQRQGVPMNSLRFLF 48 (79)
T ss_dssp HHHHHHHHHTCCGGGEEEEE
T ss_pred HHHHHHHHHCCCcccEEEEE
Confidence 56666777899999998877
No 128
>3fiq_A OBP1, RCG36470, odorant-binding protein 1F; lipocalin, oderant-binding protein, transport protein; 1.60A {Rattus norvegicus} SCOP: b.60.1.0
Probab=20.92 E-value=95 Score=22.29 Aligned_cols=37 Identities=16% Similarity=0.163 Sum_probs=24.0
Q ss_pred EEEEEEeecCChHHHHHHHHHHHHHHHhhhCCCCCcEEE
Q psy2936 59 IASLMSIGKLGTAENKKHSAVLFPHIEKTLGIPKDRMYI 97 (174)
Q Consensus 59 ~veI~sig~~~~e~n~~~s~aI~~~l~e~LGIp~dRiyI 97 (174)
+..+...| ++++.+.+.-+++.++. +.+|++.++|..
T Consensus 112 ~~~~~Lyg-R~~~~s~e~~e~F~~~~-~~~Gl~~enI~~ 148 (157)
T 3fiq_A 112 TNVILVAG-KREDLNKAQKQELRKLA-EEYNIPNENTQH 148 (157)
T ss_dssp EEEEEEEE-SSSCCCHHHHHHHHHHH-HHTTCCGGGCEE
T ss_pred EEEEEEEc-CCCCCCHHHHHHHHHHH-HHcCCCHHHEEe
Confidence 33444444 66667777666655554 458999999875
No 129
>1t0y_A Tubulin folding cofactor B; ubiquitin-like, cytoskeleton, microtubule, CESG, structural genomics, protein structure initiative, PSI; NMR {Caenorhabditis elegans} SCOP: d.15.1.1
Probab=20.19 E-value=1.2e+02 Score=21.15 Aligned_cols=24 Identities=29% Similarity=0.347 Sum_probs=20.4
Q ss_pred HHHHHHHHhhhCCCCCcEEEEEEe
Q psy2936 78 AVLFPHIEKTLGIPKDRMYISYID 101 (174)
Q Consensus 78 ~aI~~~l~e~LGIp~dRiyI~f~d 101 (174)
+.+.+.|++..|||+++..+.|.+
T Consensus 31 ~~lK~ki~~~~Gip~~~qrL~~~g 54 (122)
T 1t0y_A 31 NDLKKKLELVVGTTVDSMRIQLFD 54 (122)
T ss_dssp HHHHHHHHHHHCCCTTTEEEEEEC
T ss_pred HHHHHHHHHHhCCCHHHeEEEEec
Confidence 447778888899999999999975
No 130
>1wm3_A Ubiquitin-like protein SMT3B; ubiquitin fold, half-open barrel, two helices, protein transport; 1.20A {Homo sapiens} SCOP: d.15.1.1 PDB: 1wm2_A 3uin_B 3uio_B 2ckh_B
Probab=20.13 E-value=95 Score=19.41 Aligned_cols=22 Identities=9% Similarity=0.163 Sum_probs=17.4
Q ss_pred HHHHHHHhhhCCCCCcEEEEEE
Q psy2936 79 VLFPHIEKTLGIPKDRMYISYI 100 (174)
Q Consensus 79 aI~~~l~e~LGIp~dRiyI~f~ 100 (174)
.+.+.+++..|++++.+...|.
T Consensus 26 kl~~~y~~~~gi~~~~~rf~fd 47 (72)
T 1wm3_A 26 KLMKAYCERQGLSMRQIRFRFD 47 (72)
T ss_dssp HHHHHHHHHHTCCTTTCEEEET
T ss_pred HHHHHHHHHhCCCcceEEEEEC
Confidence 3566677889999999888874
Done!