BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2938
(113 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ULT8|HECD1_HUMAN E3 ubiquitin-protein ligase HECTD1 OS=Homo sapiens GN=HECTD1 PE=1
SV=3
Length = 2610
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 54/62 (87%), Positives = 59/62 (95%)
Query: 51 QLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK 110
QLI+CIRSKDTDALI+ ID+G EVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN+
Sbjct: 365 QLIDCIRSKDTDALIDAIDTGAFEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNR 424
Query: 111 GK 112
G+
Sbjct: 425 GQ 426
>sp|Q69ZR2|HECD1_MOUSE E3 ubiquitin-protein ligase HECTD1 OS=Mus musculus GN=Hectd1 PE=1
SV=2
Length = 2618
Score = 116 bits (291), Expect = 4e-26, Method: Composition-based stats.
Identities = 54/63 (85%), Positives = 59/63 (93%), Gaps = 1/63 (1%)
Query: 51 QLIECIRSKDTDALIETIDSGGV-EVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
QLI+CIRSKDTDALI+ ID+G EVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN
Sbjct: 365 QLIDCIRSKDTDALIDAIDTGAAFEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 424
Query: 110 KGK 112
+G+
Sbjct: 425 RGQ 427
>sp|P40480|HOS4_YEAST Protein HOS4 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=HOS4 PE=1 SV=1
Length = 1083
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 53 IECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
I C + K D + + I+ GG ++N D+ G T L+ A+ G E+VE L E GADVN
Sbjct: 336 IACDKGK-YDVVKKMIEEGGYDINDQDNAGNTALHEAALQGHIEIVELLIENGADVN 391
>sp|Q9BR61|ACBD6_HUMAN Acyl-CoA-binding domain-containing protein 6 OS=Homo sapiens
GN=ACBD6 PE=1 SV=1
Length = 282
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 57 RSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
R + D + + I S V+VN D+ G+ LL+WA G +E+V L + AD+N
Sbjct: 167 RENNIDHITKAIKSKNVDVNVKDEEGRALLHWACDRGHKELVTVLLQHRADIN 219
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 73 VEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGAD 107
++N D+ GQT L++ASA ++VE L + GAD
Sbjct: 216 ADINCQDNEGQTALHYASACEFLDIVELLLQSGAD 250
>sp|Q4I8B6|AKR1_GIBZE Palmitoyltransferase AKR1 OS=Gibberella zeae (strain PH-1 / ATCC
MYA-4620 / FGSC 9075 / NRRL 31084) GN=AKR1 PE=3 SV=1
Length = 702
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 52 LIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK 110
+++ R D A+ + +SG + + DD G T L+WA+ M +FL E GA++N+
Sbjct: 32 IMQVARVGDVPAMEKLFESGEYDATYHDDEGITPLHWAAINNQYAMCKFLIEHGAEINR 90
>sp|Q8N961|ABTB2_HUMAN Ankyrin repeat and BTB/POZ domain-containing protein 2 OS=Homo
sapiens GN=ABTB2 PE=2 SV=1
Length = 839
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 48/92 (52%), Gaps = 8/92 (8%)
Query: 18 QPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNF 77
+P HC ++ + ++ +A T+ F +++ C R+ + IE + GV N
Sbjct: 280 KPEHCFSSFRR---LDARAATEK---FNQDLGFRMLNCGRTDLINQAIEALGPDGV--NT 331
Query: 78 MDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
MDD G T L +A A G + MV+ L + GA+++
Sbjct: 332 MDDQGMTPLMYACAAGDEAMVQMLIDAGANLD 363
>sp|A2VDR2|ACBD6_BOVIN Acyl-CoA-binding domain-containing protein 6 OS=Bos taurus GN=ACBD6
PE=2 SV=1
Length = 282
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 34/58 (58%)
Query: 52 LIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
+ + R + D + + I + ++VN D+ G+TLL+WA G +E+V L + AD+N
Sbjct: 162 IFDYCRENNIDHITKVIKTKNMDVNMKDEEGRTLLHWACDRGHKELVTVLLQYRADIN 219
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 73 VEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGAD 107
++N D+ GQT L++A+A ++VE L + GAD
Sbjct: 216 ADINCQDNEGQTALHYAAACEFLDIVELLLQSGAD 250
>sp|Q7T0Q1|MTPN_XENLA Myotrophin OS=Xenopus laevis GN=mtpn PE=3 SV=1
Length = 118
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 51 QLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
+ + +++ D DA+ E + +GGV+VN + G+ L++A+ G E+VEFL +GA++N
Sbjct: 5 EFMWALKNGDLDAVKEFV-AGGVDVNRTLEGGRKPLHYAADCGQDEIVEFLLAKGANIN 62
>sp|O14593|RFXK_HUMAN DNA-binding protein RFXANK OS=Homo sapiens GN=RFXANK PE=1 SV=2
Length = 260
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 26/46 (56%)
Query: 62 DALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGAD 107
D L E + G VN D+ G T L WASAFG E V FL E GAD
Sbjct: 104 DQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD 149
>sp|Q978J0|Y1425_THEVO Putative ankyrin repeat protein TV1425 OS=Thermoplasma volcanium
(strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 /
GSS1) GN=TV1425 PE=1 SV=1
Length = 189
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 27/51 (52%)
Query: 63 ALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNKGKL 113
+ E + S G VN D G+T L W+ FG EM FL E GA+VN L
Sbjct: 79 GIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNL 129
>sp|Q8T2Q0|ZDHC6_DICDI Putative ZDHHC-type palmitoyltransferase 6 OS=Dictyostelium
discoideum GN=DDB_G0275149 PE=2 SV=1
Length = 698
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 52 LIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
LI + + + +D GGV V+ D + +T L+WA+ G +++ FL +GAD+N
Sbjct: 130 LIHATQYNEISVVRYLLDKGGVNVDSPDFLQKTSLHWAAYQGHTQLLLFLVNKGADIN 187
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 24/35 (68%)
Query: 72 GVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGA 106
G ++N +D +G++ L+WA+ G + ++ LC+ G+
Sbjct: 183 GADINALDSLGRSPLHWAAFKGNSDPIKALCDFGS 217
Score = 30.4 bits (67), Expect = 3.7, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 67 TIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
++D G + +N DD G T L+WA ++V++L GAD N
Sbjct: 45 SLDLGEI-INSGDDCGNTALHWACYKKWYDIVKYLLSMGADPN 86
>sp|Q1RMI3|GABP1_BOVIN GA-binding protein subunit beta-1 OS=Bos taurus GN=GABPB1 PE=2 SV=1
Length = 383
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 63 ALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
+++E + G +VN D + T L+WA+ QE+VE L + GADV+
Sbjct: 85 SIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 131
>sp|Q06547|GABP1_HUMAN GA-binding protein subunit beta-1 OS=Homo sapiens GN=GABPB1 PE=1
SV=2
Length = 395
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 63 ALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
+++E + G +VN D + T L+WA+ QE+VE L + GADV+
Sbjct: 85 SIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 131
>sp|Q5RJK8|ACBD6_RAT Acyl-CoA-binding domain-containing protein 6 OS=Rattus norvegicus
GN=Acbd6 PE=2 SV=1
Length = 282
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 52 LIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFL--CERG 105
+ + R + D + + I S V+VN D+ G+ LL+WA G +E+V+ L CE G
Sbjct: 162 IFDYCRENNIDHITKAIKSKTVDVNMTDEEGRALLHWACDRGHKELVKVLLQCEAG 217
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 75 VNFMDDVGQTLLNWASAFGTQEMVEFLCERGAD 107
+N D+ GQT L++A+A ++VE L + GAD
Sbjct: 218 INCQDNEGQTALHYAAACEFSDIVELLLQSGAD 250
>sp|Q9UU77|YQMA_SCHPO Ankyrin repeat-containing protein P1E11.10 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPCP1E11.10 PE=4 SV=1
Length = 207
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 61 TDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
TD +++ +DSG + N D+ G T ++ A ++G ++++ L ERG D+N
Sbjct: 17 TDVVLKHLDSG-ISPNAADENGYTPIHAAVSYGHSDLLKILVERGGDIN 64
>sp|Q6P1S6|MTPN_XENTR Myotrophin OS=Xenopus tropicalis GN=mtpn PE=3 SV=1
Length = 118
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 51 QLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
+ + I++ D DA+ E + GG +VN D G+ +++A+ G E++EFL +GA++N
Sbjct: 5 EFVWAIKNGDLDAVKEFV-LGGEDVNRTLDGGRKPMHYAADCGQDEVLEFLLSKGANIN 62
>sp|Q9D061|ACBD6_MOUSE Acyl-CoA-binding domain-containing protein 6 OS=Mus musculus
GN=Acbd6 PE=1 SV=2
Length = 282
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%)
Query: 52 LIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
+ + R + D + + I S +VN D+ G+ LL+WA G +E+V+ L + A +N
Sbjct: 162 IFDYCRENNIDHIAKAIKSKAADVNMTDEEGRALLHWACDRGHKELVKVLLQYEAGIN 219
Score = 29.3 bits (64), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 75 VNFMDDVGQTLLNWASAFGTQEMVEFLCERGAD 107
+N D+ GQT L++A+A ++VE L + GAD
Sbjct: 218 INCQDNEGQTALHYAAACEFLDIVELLLQSGAD 250
>sp|Q9FY74|CMTA1_ARATH Calmodulin-binding transcription activator 1 OS=Arabidopsis
thaliana GN=CMTA1 PE=2 SV=2
Length = 1007
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 62 DALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGAD 107
D I+ + + GV +NF D G + L+WA+ G +E V L GAD
Sbjct: 626 DWAIKPVLAAGVNINFRDANGWSALHWAAFSGREETVAVLVSLGAD 671
>sp|Q7TQI7|ABTB2_MOUSE Ankyrin repeat and BTB/POZ domain-containing protein 2 OS=Mus
musculus GN=Abtb2 PE=2 SV=1
Length = 1024
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 50 LQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
+++ C R+ IE + GV N MDD G T L +A A G + MV+ L + GA+++
Sbjct: 492 FRMLNCGRTDLISQAIEALGPDGV--NTMDDQGMTPLMYACAAGDEAMVQMLIDAGANLD 549
>sp|Q00420|GABP1_MOUSE GA-binding protein subunit beta-1 OS=Mus musculus GN=Gabpb1 PE=1
SV=2
Length = 383
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 64 LIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
++E + G +VN D + T L+WA+ QE+VE L + GADV+
Sbjct: 86 IVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVH 131
>sp|Q4V8X4|ACBD6_DANRE Acyl-CoA-binding domain-containing protein 6 OS=Danio rerio
GN=acbd6 PE=2 SV=1
Length = 300
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%)
Query: 52 LIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
+ + R + + + + I S V+VN D+ G+ LL+WA G +++V L + AD+N
Sbjct: 180 IFDYCRENNIEHVSKAISSKTVDVNTRDEEGRALLHWACDRGHKDLVSLLLQNNADIN 237
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 64 LIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGAD 107
L+ + ++N DD GQT L++ASA E+VE L + GAD
Sbjct: 225 LVSLLLQNNADINSQDDEGQTALHYASACEFAEIVELLLKAGAD 268
>sp|Q6NPP4|CMTA2_ARATH Calmodulin-binding transcription activator 2 OS=Arabidopsis
thaliana GN=CMTA2 PE=1 SV=1
Length = 1050
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 62 DALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADV 108
D I+ I + GV +NF D G + L+WA+ G ++ V L GAD
Sbjct: 675 DWAIKPILAAGVSINFRDANGWSALHWAAFSGREDTVAVLVSLGADA 721
>sp|Q9Z205|RFXK_MOUSE DNA-binding protein RFXANK OS=Mus musculus GN=Rfxank PE=2 SV=1
Length = 269
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 23/38 (60%)
Query: 70 SGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGAD 107
SG +N D+ G T L WASAFG E V FL + GAD
Sbjct: 121 SGNNLINKPDERGFTPLIWASAFGEIETVRFLLDWGAD 158
>sp|Q66JD7|ACBD6_XENTR Acyl-CoA-binding domain-containing protein 6 OS=Xenopus tropicalis
GN=acbd6 PE=2 SV=1
Length = 286
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 26/114 (22%)
Query: 22 CQAALNQ--------EGNIEYKAHTKTHKTFKT-------SNILQLIECIRSKDTD---- 62
CQ A+N+ + + +A + HK KT S + ++ E +R +D D
Sbjct: 97 CQQAMNEYIETVKKLDPDWSPQALEEPHKEPKTTFGGPVVSCLYKVQETLREEDKDIFDY 156
Query: 63 -------ALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
+ + +G ++VN DD G+ LL+WA G ++V L A +N
Sbjct: 157 CRENNISRVSHALSTGAIDVNVADDEGRCLLHWACDRGHTQLVSVLLFHNAHIN 210
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 64 LIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGAD 107
L+ + +N D GQT L++ASA ++V+ L + GAD
Sbjct: 198 LVSVLLFHNAHINMQDSEGQTPLHYASACEFPDIVDLLLDHGAD 241
>sp|Q7S3M5|AKR1_NEUCR Palmitoyltransferase AKR1 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=akr-1
PE=3 SV=2
Length = 729
Score = 37.4 bits (85), Expect = 0.027, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 52 LIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK 110
+++ R D + + +G + + DD G T L+WA+ M +FL ++GA++NK
Sbjct: 47 IMQMARVGDITGMEKLFAAGEYDATYSDDEGITPLHWAAINNQYAMCKFLIDKGAEINK 105
>sp|Q9LSP8|CMTA6_ARATH Calmodulin-binding transcription activator 6 OS=Arabidopsis
thaliana GN=CMTA6 PE=2 SV=1
Length = 838
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%)
Query: 65 IETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
++ G+ +NF D G T L+WA+ +G ++MV L GA N
Sbjct: 509 VQLFSLSGLSLNFRDKQGWTALHWAAYYGREKMVAALLSAGARPN 553
>sp|Q09701|AKR1_SCHPO Palmitoyltransferase akr1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=akr1 PE=3 SV=1
Length = 642
Score = 37.4 bits (85), Expect = 0.030, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 60 DTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
+ D + I S ++VN D+ G T L+WA+ + +FL E GADVN
Sbjct: 12 ELDTVKNLISSEKIDVNATDEGGATALHWAALNQQIPICKFLLEHGADVN 61
>sp|Q9J5H8|V023_FOWPN Putative ankyrin repeat protein FPV023 OS=Fowlpox virus (strain
NVSL) GN=FPV023 PE=4 SV=1
Length = 434
Score = 37.0 bits (84), Expect = 0.031, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 53 IECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAF-GTQEMVEFLCERGADVN 109
+E R + +++ + S G+++NF DD+G T L++A + MV L + GAD+N
Sbjct: 139 MEPSRQIEEIQIMDILLSKGIDINFKDDIGNTALHYACDYRNGLNMVRHLIKNGADIN 196
>sp|Q4UMH6|Y381_RICFE Putative ankyrin repeat protein RF_0381 OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=RF_0381 PE=4 SV=1
Length = 1179
Score = 37.0 bits (84), Expect = 0.036, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 37 HTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQE 96
H T KT + L + L+ + G++VN + G+T+L++A G+ +
Sbjct: 985 HNGTDINTKTDDGLTALHYAVESGNLNLVSLLIHKGIDVNAKTNSGETILHFAVDLGSLD 1044
Query: 97 MVEFLCERGADVN 109
+V L RGADVN
Sbjct: 1045 LVSLLMVRGADVN 1057
Score = 36.2 bits (82), Expect = 0.067, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 45 KTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCER 104
KT + L + D AL+ + G +VN ++ G+T L++A F + ++V L
Sbjct: 1059 KTDDGLTALHYAVESDNLALVSLLMVYGADVNAKNNSGETPLHYAVIFNSLDLVSLLIHN 1118
Query: 105 GADVN 109
GAD+N
Sbjct: 1119 GADIN 1123
Score = 33.9 bits (76), Expect = 0.32, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 72 GVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNKGK 112
G +VN D G+T+L++A G ++V L GA+VN K
Sbjct: 793 GADVNAKTDNGETVLHYAVESGNLDLVSLLIHNGANVNNAK 833
Score = 33.1 bits (74), Expect = 0.55, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 64 LIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
L+ + S G +VN + G+T+L A +G+ ++V L GADVN
Sbjct: 752 LVSLLISHGADVNAKTNSGETILYSAVDYGSPDLVYLLIAYGADVN 797
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 32/65 (49%)
Query: 45 KTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCER 104
KT N ++ S + L+ + + G +VN D G T L++A G ++V L
Sbjct: 700 KTDNGETVLHYAVSFNNSDLVYLLIAYGADVNAKTDNGLTALHYAVYDGNLDLVSLLISH 759
Query: 105 GADVN 109
GADVN
Sbjct: 760 GADVN 764
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 64 LIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
L+ + G ++N D G T L++A G +V L +G DVN
Sbjct: 979 LVSLLIHNGTDINTKTDDGLTALHYAVESGNLNLVSLLIHKGIDVN 1024
Score = 28.9 bits (63), Expect = 9.0, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 53 IECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
+ C L + + G +VN D G+T+L++A G +V++L E A+++
Sbjct: 642 LHCAAKNGNLDLAKLLAKNGADVNAKTDNGETVLHYAVKSGNLHLVKWLIENQANIH 698
>sp|Q5DW34|EHMT1_MOUSE Histone-lysine N-methyltransferase EHMT1 OS=Mus musculus GN=Ehmt1
PE=1 SV=2
Length = 1296
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 68 IDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
+ +G ++VN DD G T + WA+ + E+V+ L +G+D+N
Sbjct: 857 LSNGQMDVNCQDDGGWTPMIWATEYKHVELVKLLLSKGSDIN 898
>sp|Q9J505|V230_FOWPN Putative ankyrin repeat protein FPV230 OS=Fowlpox virus (strain
NVSL) GN=FPV230 PE=4 SV=1
Length = 188
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 75 VNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
+N +G T L+ AS + + MV+F ERGAD+N
Sbjct: 129 INMTSKLGSTPLHIASKYNNKTMVKFFLERGADIN 163
>sp|P17369|V14_VACCW Ankyrin repeat protein 14 OS=Vaccinia virus (strain Western
Reserve) GN=VACWR014 PE=4 SV=1
Length = 237
Score = 36.2 bits (82), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 74 EVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
++N +D G+TLL+ A + Q +V L E G+DVN
Sbjct: 20 DINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVN 55
>sp|P0C7A6|BTBBB_DANRE Ankyrin repeat and BTB/POZ domain-containing protein BTBD11-B
OS=Danio rerio GN=btbd11b PE=4 SV=1
Length = 1012
Score = 36.2 bits (82), Expect = 0.060, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 50 LQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
+++ C R+ + I + GG+ N M + G T L +A G + MV+ L + GAD+N
Sbjct: 482 FRMLNCGRTDLVNQAINLLGPGGI--NSMSEQGMTPLMYACVRGDEAMVQMLLDAGADIN 539
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 78 MDDVGQTLLNWASAFGTQEMVEFLCERGAD 107
M++ +T L ASA G E+V L ERGAD
Sbjct: 592 MENYTETPLQLASAAGNFELVSLLLERGAD 621
>sp|Q5VYY1|ANR22_HUMAN Ankyrin repeat domain-containing protein 22 OS=Homo sapiens
GN=ANKRD22 PE=2 SV=1
Length = 191
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 57 RSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGAD 107
++K +AL+ + GVEVN D G T L++A Q ++ L E AD
Sbjct: 110 KTKQNEALVRMLLDAGVEVNATDCYGCTALHYACEMKNQSLIPLLLEARAD 160
>sp|Q9NU02|ANKR5_HUMAN Ankyrin repeat domain-containing protein 5 OS=Homo sapiens
GN=ANKRD5 PE=2 SV=2
Length = 776
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 8/97 (8%)
Query: 13 DVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGG 72
D R+ H Q+ ++ Y + K F NI+ ++ D +L + +SG
Sbjct: 464 DSSRFNRDHPPEHPIQDDSVWYI--DDSEKVFSNINIIT-----KAGDLASLKKAFESG- 515
Query: 73 VEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
+ V+ D+ +T L A A G ++V+FL E+GA+VN
Sbjct: 516 IPVDMKDNYYKTPLMTACASGNIDVVKFLLEKGANVN 552
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 42 KTFKTSNILQLIECIRSKDTDALIETIDSGGVE-VNFMDDV-GQTLLNWASAFGTQEMVE 99
K + I ++++C+R+KD + + G E +N+ + + G + L+ AS +MV
Sbjct: 6 KRLENLQIYKVLQCVRNKDKKQIEKLTKLGYPELINYTEPINGLSALHLASVSNDIDMVS 65
Query: 100 FLCERGA 106
FL + GA
Sbjct: 66 FLLDLGA 72
>sp|Q9FYG2|CMTA4_ARATH Calmodulin-binding transcription activator 4 OS=Arabidopsis
thaliana GN=CMTA4 PE=1 SV=1
Length = 1016
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 72 GVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGA 106
GV V+F D G + L+WA+ FG+++MV L GA
Sbjct: 671 GVNVDFRDIKGWSALHWAAQFGSEKMVAALIASGA 705
>sp|Q4V869|ACBD6_XENLA Acyl-CoA-binding domain-containing protein 6 OS=Xenopus laevis
GN=acbd6 PE=2 SV=1
Length = 286
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 52 LIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
+ + R + + + +G V+VN DD G++LL+WA G ++V + A +N
Sbjct: 153 IFDYCRENNHSRVSHALSTGSVDVNVADDEGRSLLHWACDRGHTQLVSVILFHNAHIN 210
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 64 LIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGAD 107
L+ I +N D GQT L++ASA ++V+ L + GAD
Sbjct: 198 LVSVILFHNAHINMQDSEGQTPLHYASACEFPDIVDLLLDHGAD 241
>sp|Q9NWX5|ASB6_HUMAN Ankyrin repeat and SOCS box protein 6 OS=Homo sapiens GN=ASB6 PE=1
SV=1
Length = 421
Score = 35.8 bits (81), Expect = 0.088, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 32 IEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQ-TLLNWAS 90
+E KAH+ ++ ++ +L++ E ++ D L+ G +NF D V T L+ A
Sbjct: 56 LERKAHSPFYQEGVSNALLKMAELGLTRAADVLLRH----GANLNFEDPVTYYTALHIAV 111
Query: 91 AFGTQEMVEFLCERGADVNK 110
+MVE L GADVN+
Sbjct: 112 LRNQPDMVELLVHHGADVNR 131
>sp|Q8Q0U0|Y045_METMA Putative ankyrin repeat protein MM_0045 OS=Methanosarcina mazei
(strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833
/ OCM 88) GN=MM_0045 PE=4 SV=1
Length = 360
Score = 35.8 bits (81), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 28/46 (60%)
Query: 64 LIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
++ + GG +N D+ G T L +++ G +++VE L + GAD+N
Sbjct: 281 IVNLLIEGGASLNIPDEAGLTALMFSAQTGRKDIVELLIKAGADIN 326
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 66 ETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
E + G ++N D+ G+T L A+ G + +VE L GAD+N
Sbjct: 217 ELLIKAGADLNIQDNSGKTALVAATKIGHKGIVELLVNAGADLN 260
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 27/46 (58%)
Query: 64 LIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
+I+ + G ++NF D+ G+T L +A G + + + L + G D+N
Sbjct: 149 IIDLLVKNGADLNFQDENGETALKFAVKVGYKNIADQLIDAGTDLN 194
>sp|O08764|ABTB2_RAT Ankyrin repeat and BTB/POZ domain-containing protein 2 OS=Rattus
norvegicus GN=Abtb2 PE=2 SV=1
Length = 1009
Score = 35.4 bits (80), Expect = 0.095, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 50 LQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
+++ C R TD + + G VN MDD G T L +A A G + MV+ L + GA+++
Sbjct: 492 FRMLNCGR---TDLISQPSSPGPDGVNTMDDQGLTPLMYACATGDEAMVQMLIDAGANLD 548
>sp|Q9H9B1|EHMT1_HUMAN Histone-lysine N-methyltransferase EHMT1 OS=Homo sapiens GN=EHMT1
PE=1 SV=4
Length = 1298
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%)
Query: 68 IDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
+ +G ++VN DD G T + WA+ + ++V+ L +G+D+N
Sbjct: 859 LSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDIN 900
>sp|Q9ULJ7|ANR50_HUMAN Ankyrin repeat domain-containing protein 50 OS=Homo sapiens
GN=ANKRD50 PE=1 SV=4
Length = 1429
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 72 GVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
G EVN D+ G+T L A+ G +E+VE L + GA+VN
Sbjct: 667 GAEVNKADNEGRTALIAAAYMGHREIVEHLLDHGAEVN 704
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 65 IETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADV 108
I T+ G VN D G+TLL A+ G+ ++V L RGAD+
Sbjct: 528 IRTLLDNGASVNQCDSNGRTLLANAAYSGSLDVVNLLVSRGADL 571
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 63 ALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
+++ T+ G V+ +D G+T+L+ ASA G E+V L +RG D N
Sbjct: 795 SVVNTLLFWGAAVDSIDSEGRTVLSIASAQGNVEVVRTLLDRGLDEN 841
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 64 LIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNK 110
++ T+ G++ N DD G T L+ A+ G + + E L E+GA N+
Sbjct: 829 VVRTLLDRGLDENHRDDAGWTPLHMAAFEGHRLICEALIEQGARTNE 875
Score = 28.9 bits (63), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 58 SKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
SK +++ + G EV+ D G T L A+ G ++V+ L E GADV+
Sbjct: 724 SKGHASVVSLLIDRGAEVDHCDKDGMTPLLVAAYEGHVDVVDLLLEGGADVD 775
>sp|Q52T38|ZDH22_ARATH S-acyltransferase TIP1 OS=Arabidopsis thaliana GN=TIP1 PE=2 SV=1
Length = 620
Score = 35.4 bits (80), Expect = 0.11, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 68 IDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
I+ GG +VN D GQT L+W++ G ++ E L + GA V+
Sbjct: 85 IEHGG-DVNATDHTGQTALHWSAVRGAIQVAELLLQEGARVD 125
>sp|Q5UPB9|YL042_MIMIV Putative ankyrin repeat protein L42 OS=Acanthamoeba polyphaga
mimivirus GN=MIMI_L42 PE=4 SV=1
Length = 357
Score = 35.0 bits (79), Expect = 0.12, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 8/66 (12%)
Query: 56 IRSKDTDALIETIDSGGVE-VNFMDDVGQTLLN-------WASAFGTQEMVEFLCERGAD 107
IR+++ L+ + + G + VNF+ D + ++ A FG ++V+ L E+GAD
Sbjct: 143 IRARNNRPLVLSCEKGYINIVNFLLDKKASFVSKQNEVFSTACGFGQMDIVKLLVEKGAD 202
Query: 108 VNKGKL 113
+N GK+
Sbjct: 203 INVGKI 208
>sp|Q5R4M7|ASB6_PONAB Ankyrin repeat and SOCS box protein 6 OS=Pongo abelii GN=ASB6 PE=2
SV=1
Length = 421
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 32 IEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQ-TLLNWAS 90
+E KAH+ ++ ++ +L++ E ++ D L+ G +NF D V T L+ A
Sbjct: 56 LERKAHSPFYQEGVSNALLKMAELGLTRAADVLLRH----GANLNFEDPVTYYTALHIAV 111
Query: 91 AFGTQEMVEFLCERGADVNK 110
+MVE L GAD+N+
Sbjct: 112 LRNQPDMVELLVHHGADINR 131
>sp|Q5UPV1|YL271_MIMIV Putative ankyrin repeat protein L271 OS=Acanthamoeba polyphaga
mimivirus GN=MIMI_L271 PE=4 SV=1
Length = 728
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
Query: 52 LIECIRSKDTDAL--IETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGAD 107
++ C SK+ D L ++ + S G +N D +G++ L++A ++++E+L GAD
Sbjct: 483 MVACRASKNDDQLDLVKMLVSYGFNINSRDKIGRSALHYAVNGSNRKIIEYLLALGAD 540
>sp|Q9ERC1|MYO16_RAT Unconventional myosin-XVI OS=Rattus norvegicus GN=Myo16 PE=1 SV=1
Length = 1912
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 70 SGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
S G +VN +D G TLL+ A A G +E+V L E G D+N
Sbjct: 210 SSGGDVNEKNDDGVTLLHMACASGYKEVVLLLLEHGGDLN 249
>sp|Q5B0V6|AKR1_EMENI Palmitoyltransferase akr1 OS=Emericella nidulans (strain FGSC A4 /
ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=akr1 PE=3
SV=2
Length = 737
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 52 LIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
+++ R + + + D N+ D+ G T L+WA+ M +FL + GADVN
Sbjct: 68 IMQVARIGEVSVMQKLFDEKKFTANYSDEEGITPLHWAAINNQYAMCKFLIDSGADVN 125
>sp|Q5DU14|MYO16_MOUSE Unconventional myosin-XVI OS=Mus musculus GN=Myo16 PE=1 SV=2
Length = 1919
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 70 SGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
S G +VN +D G TLL+ A A G +E+V L E G D+N
Sbjct: 210 SSGGDVNEKNDDGVTLLHMACASGYKEVVLLLLEHGGDLN 249
>sp|Q9Z2F6|BCL3_MOUSE B-cell lymphoma 3 protein homolog OS=Mus musculus GN=Bcl3 PE=1 SV=2
Length = 448
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 63 ALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVN 109
AL+++ SG V++ + G T L+ A G QE V L ERGAD++
Sbjct: 218 ALLDSATSGSVDLEVRNYEGLTALHVAVNTGCQEAVLLLLERGADID 264
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.130 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,720,191
Number of Sequences: 539616
Number of extensions: 1388561
Number of successful extensions: 5020
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 319
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 4135
Number of HSP's gapped (non-prelim): 943
length of query: 113
length of database: 191,569,459
effective HSP length: 81
effective length of query: 32
effective length of database: 147,860,563
effective search space: 4731538016
effective search space used: 4731538016
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)