Query psy2938
Match_columns 113
No_of_seqs 132 out of 2197
Neff 10.9
Searched_HMMs 29240
Date Fri Aug 16 21:26:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2938.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2938hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 2.9E-23 9.8E-28 121.5 7.2 105 8-112 29-133 (169)
2 4gpm_A Engineered protein OR26 99.9 2.9E-23 9.9E-28 121.4 5.7 103 8-110 62-164 (169)
3 1n0q_A 3ANK, 3 ankyrin repeats 99.9 7.5E-22 2.6E-26 104.8 6.2 93 15-107 1-93 (93)
4 3c5r_A BARD-1, BRCA1-associate 99.8 5.3E-21 1.8E-25 107.9 6.4 102 11-112 5-106 (137)
5 3aaa_C Myotrophin, protein V-1 99.8 8.6E-21 2.9E-25 105.3 5.7 100 13-112 4-103 (123)
6 3f6q_A Integrin-linked protein 99.8 1.5E-20 5.2E-25 110.3 6.8 105 8-112 31-135 (179)
7 3twr_A Tankyrase-2; ankyrin re 99.8 1.8E-20 6.3E-25 108.5 7.0 105 8-112 34-138 (165)
8 3v30_A DNA-binding protein rfx 99.8 2.2E-20 7.6E-25 108.8 7.3 105 8-112 28-132 (172)
9 4b93_B Ankyrin repeat domain-c 99.8 9.8E-21 3.4E-25 117.8 5.8 105 8-112 78-215 (269)
10 1d9s_A Cyclin-dependent kinase 99.8 2.7E-21 9.3E-26 109.1 2.9 104 8-112 4-108 (136)
11 4b93_B Ankyrin repeat domain-c 99.8 1.1E-20 3.8E-25 117.5 5.9 102 8-109 144-246 (269)
12 2l6b_A NR1C; ankyrin, consensu 99.8 1.7E-21 5.8E-26 107.0 1.5 103 10-112 3-105 (115)
13 1awc_B Protein (GA binding pro 99.8 3.5E-20 1.2E-24 106.3 6.8 101 12-112 30-130 (153)
14 2y1l_E Darpin-8.4; hydrolase-i 99.8 5E-20 1.7E-24 107.2 7.2 105 8-112 39-143 (169)
15 1oy3_D Transcription factor in 99.8 3.9E-20 1.3E-24 114.7 6.8 105 8-112 150-255 (282)
16 3v31_A Ankyrin repeat family A 99.8 3.4E-20 1.1E-24 107.6 6.1 105 8-112 28-132 (167)
17 2rfm_A Putative ankyrin repeat 99.8 4.3E-20 1.5E-24 109.3 5.8 60 52-111 104-163 (192)
18 2rfm_A Putative ankyrin repeat 99.8 8.4E-20 2.9E-24 108.1 7.0 104 9-112 28-131 (192)
19 1bi7_B P16INK4A, MTS1, multipl 99.8 6.5E-21 2.2E-25 109.7 0.8 103 9-112 38-141 (156)
20 3ehr_A Osteoclast-stimulating 99.8 7.4E-20 2.5E-24 110.6 5.4 103 10-112 67-170 (222)
21 1yyh_A HN1;, notch 1, ankyrin 99.8 2.2E-19 7.4E-24 110.4 7.2 105 8-112 116-220 (253)
22 2jab_A H10-2-G3; HER2, darpin, 99.8 7.6E-20 2.6E-24 103.1 4.7 100 13-112 11-110 (136)
23 3deo_A Signal recognition part 99.8 5.9E-20 2E-24 108.3 4.3 100 12-112 40-140 (183)
24 1d9s_A Cyclin-dependent kinase 99.8 1.5E-20 5.2E-25 106.0 1.4 99 8-107 37-136 (136)
25 1ycs_B 53BP2, P53BP2; ankyrin 99.8 1.5E-19 5E-24 110.5 5.4 99 14-112 35-133 (239)
26 1n0r_A 4ANK, 4 ankyrin repeats 99.8 4.1E-19 1.4E-23 98.3 6.4 99 9-107 28-126 (126)
27 3ui2_A Signal recognition part 99.8 1.1E-19 3.9E-24 111.4 4.4 99 13-112 42-141 (244)
28 2vge_A RELA-associated inhibit 99.8 1.8E-19 6E-24 109.8 5.2 102 11-112 16-117 (229)
29 1bd8_A P19INK4D CDK4/6 inhibit 99.8 2.3E-19 7.7E-24 103.0 5.0 103 8-112 28-130 (156)
30 1n0r_A 4ANK, 4 ankyrin repeats 99.8 5.3E-19 1.8E-23 97.8 6.3 98 15-112 1-98 (126)
31 2jab_A H10-2-G3; HER2, darpin, 99.8 3.6E-19 1.2E-23 100.3 5.6 98 8-105 39-136 (136)
32 1k1a_A B-cell lymphoma 3-encod 99.8 6.5E-19 2.2E-23 107.1 7.0 105 8-112 108-213 (241)
33 1bi7_B P16INK4A, MTS1, multipl 99.8 9.1E-20 3.1E-24 104.9 3.0 102 10-112 6-108 (156)
34 1ihb_A P18-INK4C(INK6), cyclin 99.8 1.9E-19 6.4E-24 103.9 4.2 104 8-112 30-134 (162)
35 1ihb_A P18-INK4C(INK6), cyclin 99.8 4.7E-19 1.6E-23 102.2 5.9 100 8-107 62-162 (162)
36 2dzn_A Probable 26S proteasome 99.8 6.4E-19 2.2E-23 106.4 6.4 105 8-112 99-205 (228)
37 1wdy_A 2-5A-dependent ribonucl 99.8 6.3E-19 2.2E-23 109.1 6.5 106 8-113 174-284 (285)
38 2f8y_A Notch homolog 1, transl 99.8 9.7E-19 3.3E-23 105.4 7.0 104 9-112 85-188 (223)
39 3aji_A 26S proteasome non-ATPa 99.8 7.9E-19 2.7E-23 106.2 6.6 102 11-112 101-202 (231)
40 2rfa_A Transient receptor pote 99.8 8.4E-19 2.9E-23 106.3 6.7 105 8-112 29-151 (232)
41 1dcq_A PYK2-associated protein 99.8 6.2E-19 2.1E-23 110.2 5.9 99 10-108 163-264 (278)
42 3lvq_E ARF-GAP with SH3 domain 99.8 5.6E-19 1.9E-23 117.8 5.4 100 13-112 168-270 (497)
43 2etb_A Transient receptor pote 99.8 2.2E-18 7.4E-23 105.9 7.5 101 12-112 39-169 (256)
44 1ikn_D Protein (I-kappa-B-alph 99.8 1.2E-18 4.2E-23 105.9 6.4 67 46-112 114-181 (236)
45 1n11_A Ankyrin; clathrin, BAND 99.8 1E-18 3.5E-23 114.4 6.3 103 10-112 272-374 (437)
46 3b7b_A Euchromatic histone-lys 99.8 1.2E-18 4.2E-23 105.8 6.2 105 8-112 103-207 (237)
47 3t8k_A Uncharacterized protein 99.7 2E-19 6.8E-24 106.6 1.9 95 9-112 30-151 (186)
48 3utm_A Tankyrase-1; tankyrase, 99.7 2.4E-18 8.2E-23 109.3 7.0 105 8-112 50-154 (351)
49 3kea_A K1L; tropism, ANK repea 99.7 6.2E-19 2.1E-23 110.3 4.1 103 8-112 23-125 (285)
50 3d9h_A CDNA FLJ77766, highly s 99.7 2.2E-18 7.6E-23 107.7 6.4 106 6-111 49-154 (285)
51 3v30_A DNA-binding protein rfx 99.7 6.7E-19 2.3E-23 102.5 3.8 105 8-112 61-165 (172)
52 3v31_A Ankyrin repeat family A 99.7 2.4E-18 8.1E-23 99.8 5.8 98 15-112 2-99 (167)
53 3ljn_A Hypothetical protein; a 99.7 8.5E-19 2.9E-23 112.5 4.3 101 12-112 134-241 (364)
54 3aji_A 26S proteasome non-ATPa 99.7 3.7E-18 1.3E-22 103.3 6.8 102 9-110 33-134 (231)
55 4hbd_A KN motif and ankyrin re 99.7 1.3E-18 4.5E-23 108.4 4.8 105 8-112 103-247 (276)
56 1yyh_A HN1;, notch 1, ankyrin 99.7 1.6E-18 5.4E-23 106.6 5.0 103 10-112 84-187 (253)
57 1ycs_B 53BP2, P53BP2; ankyrin 99.7 7.9E-18 2.7E-22 102.8 7.8 99 13-112 2-100 (239)
58 2xai_A ASB-9, ankyrin repeat a 99.7 2.7E-18 9.3E-23 106.0 5.7 103 9-112 29-131 (261)
59 2dzn_A Probable 26S proteasome 99.7 7.1E-18 2.4E-22 101.8 7.5 101 12-112 68-171 (228)
60 2vge_A RELA-associated inhibit 99.7 1.5E-19 5E-24 110.1 0.0 105 8-112 46-153 (229)
61 1n11_A Ankyrin; clathrin, BAND 99.7 1.9E-18 6.6E-23 113.1 5.1 105 8-112 6-110 (437)
62 1s70_B 130 kDa myosin-binding 99.7 4.6E-18 1.6E-22 106.3 6.6 62 51-112 201-262 (299)
63 2f8y_A Notch homolog 1, transl 99.7 6E-18 2E-22 101.9 6.6 103 10-112 52-155 (223)
64 2etb_A Transient receptor pote 99.7 1.2E-18 4.3E-23 107.0 3.6 97 12-108 86-207 (256)
65 1ikn_D Protein (I-kappa-B-alph 99.7 6.7E-18 2.3E-22 102.7 6.7 105 8-112 37-147 (236)
66 3hra_A Ankyrin repeat family p 99.7 6.4E-18 2.2E-22 100.3 6.4 98 8-105 31-129 (201)
67 3hra_A Ankyrin repeat family p 99.7 6.4E-18 2.2E-22 100.3 6.1 105 8-112 64-175 (201)
68 4g8k_A 2-5A-dependent ribonucl 99.7 1.3E-17 4.5E-22 106.1 7.8 71 42-112 232-303 (337)
69 3jxi_A Vanilloid receptor-rela 99.7 1.3E-18 4.5E-23 107.1 3.0 99 10-108 87-211 (260)
70 3utm_A Tankyrase-1; tankyrase, 99.7 7.4E-18 2.5E-22 107.0 6.4 101 12-112 207-310 (351)
71 1s70_B 130 kDa myosin-binding 99.7 5.4E-18 1.8E-22 106.0 5.2 101 12-112 36-136 (299)
72 4hbd_A KN motif and ankyrin re 99.7 5.5E-18 1.9E-22 105.6 5.0 99 14-112 74-213 (276)
73 1oy3_D Transcription factor in 99.7 1.1E-17 3.7E-22 103.7 6.3 65 48-112 157-222 (282)
74 3f6q_A Integrin-linked protein 99.7 1.5E-18 5.1E-23 101.7 2.2 105 8-112 64-168 (179)
75 2y1l_E Darpin-8.4; hydrolase-i 99.7 1.1E-17 3.7E-22 97.3 5.7 98 8-105 72-169 (169)
76 2xai_A ASB-9, ankyrin repeat a 99.7 1.1E-17 3.8E-22 103.3 6.0 61 51-112 136-196 (261)
77 3twr_A Tankyrase-2; ankyrin re 99.7 1.1E-17 3.7E-22 96.8 5.6 101 12-112 4-105 (165)
78 3b7b_A Euchromatic histone-lys 99.7 1.7E-17 5.8E-22 100.7 6.7 99 13-111 41-140 (237)
79 2pnn_A Transient receptor pote 99.7 1.5E-17 5.1E-22 103.1 6.3 101 12-112 50-181 (273)
80 1sw6_A Regulatory protein SWI6 99.7 8.5E-18 2.9E-22 106.9 5.3 39 74-112 275-313 (327)
81 3jxi_A Vanilloid receptor-rela 99.7 1.9E-17 6.5E-22 101.9 6.5 99 14-112 44-173 (260)
82 2rfa_A Transient receptor pote 99.7 1.5E-17 5.2E-22 100.7 5.9 100 10-109 69-185 (232)
83 1n0q_A 3ANK, 3 ankyrin repeats 99.7 3.1E-17 1.1E-21 86.8 6.2 61 52-112 5-65 (93)
84 4g8k_A 2-5A-dependent ribonucl 99.7 1.8E-17 6E-22 105.5 6.1 99 8-111 231-330 (337)
85 2pnn_A Transient receptor pote 99.7 5.4E-18 1.9E-22 105.1 3.5 99 12-110 97-221 (273)
86 2zgd_A 3 repeat synthetic anky 99.7 1E-17 3.4E-22 91.4 4.2 92 10-101 18-109 (110)
87 3d9h_A CDNA FLJ77766, highly s 99.7 4.1E-17 1.4E-21 102.0 7.0 67 45-112 186-252 (285)
88 3ljn_A Hypothetical protein; a 99.7 9.4E-18 3.2E-22 107.7 4.0 101 8-108 165-270 (364)
89 1awc_B Protein (GA binding pro 99.7 3.6E-17 1.2E-21 93.7 6.1 94 8-101 59-152 (153)
90 2fo1_E LIN-12 protein; beta-ba 99.7 1.5E-17 5.2E-22 107.4 4.9 105 8-112 227-343 (373)
91 1bd8_A P19INK4D CDK4/6 inhibit 99.7 2.4E-17 8.2E-22 94.5 4.7 96 8-104 60-155 (156)
92 3kea_A K1L; tropism, ANK repea 99.7 2.3E-17 7.8E-22 103.2 4.9 65 48-112 160-225 (285)
93 2b0o_E UPLC1; arfgap, structur 99.7 1.2E-17 4.1E-22 105.4 3.5 95 13-107 187-284 (301)
94 3t8k_A Uncharacterized protein 99.7 2.7E-18 9.1E-23 101.7 0.3 106 7-112 66-184 (186)
95 1wdy_A 2-5A-dependent ribonucl 99.7 6.9E-17 2.4E-21 99.9 6.5 99 13-111 36-134 (285)
96 1k1a_A B-cell lymphoma 3-encod 99.7 6.1E-17 2.1E-21 98.3 6.2 65 48-112 115-180 (241)
97 2fo1_E LIN-12 protein; beta-ba 99.7 5.5E-17 1.9E-21 104.8 6.2 105 8-112 116-232 (373)
98 3jue_A Arfgap with coiled-coil 99.7 3E-17 1E-21 106.1 4.0 64 49-112 235-298 (368)
99 2b0o_E UPLC1; arfgap, structur 99.7 6.7E-17 2.3E-21 102.0 5.4 65 48-112 189-256 (301)
100 3lvq_E ARF-GAP with SH3 domain 99.7 5.2E-17 1.8E-21 108.4 5.0 85 24-112 150-237 (497)
101 1dcq_A PYK2-associated protein 99.7 3.7E-17 1.3E-21 102.1 3.9 65 48-112 169-235 (278)
102 3ehr_A Osteoclast-stimulating 99.7 5.7E-18 2E-22 102.2 0.2 105 8-112 98-203 (222)
103 3eu9_A Huntingtin-interacting 99.7 2.8E-16 9.7E-21 95.1 6.7 105 8-112 34-139 (240)
104 2zgd_A 3 repeat synthetic anky 99.6 9.5E-16 3.2E-20 83.5 8.0 66 47-112 22-87 (110)
105 3jue_A Arfgap with coiled-coil 99.6 1.4E-16 4.6E-21 103.1 4.7 99 8-106 225-325 (368)
106 3eu9_A Huntingtin-interacting 99.6 2.4E-16 8.2E-21 95.4 4.6 45 63-107 191-235 (240)
107 3ui2_A Signal recognition part 99.6 1.4E-16 4.8E-21 97.7 3.0 98 8-105 69-183 (244)
108 3deo_A Signal recognition part 99.6 4.8E-16 1.6E-20 91.5 3.9 98 7-104 67-181 (183)
109 1sw6_A Regulatory protein SWI6 99.6 2.5E-16 8.7E-21 100.1 2.3 97 8-104 122-227 (327)
110 3aaa_C Myotrophin, protein V-1 99.6 7.6E-15 2.6E-19 81.1 7.9 63 50-112 8-70 (123)
111 3c5r_A BARD-1, BRCA1-associate 99.6 3.4E-15 1.2E-19 83.9 6.3 65 47-112 9-73 (137)
112 2l6b_A NR1C; ankyrin, consensu 99.6 1.6E-15 5.3E-20 83.0 3.8 67 46-112 6-72 (115)
113 2aja_A Ankyrin repeat family p 99.5 1.8E-15 6E-20 98.1 -1.4 99 9-108 85-189 (376)
114 2aja_A Ankyrin repeat family p 99.5 1.3E-14 4.4E-19 94.1 1.6 95 11-106 123-223 (376)
115 3zrh_A Ubiquitin thioesterase 50.7 54 0.0019 22.1 6.1 56 47-103 21-90 (454)
116 1gp8_A Protein (scaffolding pr 38.7 26 0.00088 14.9 2.2 17 86-102 17-33 (40)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.89 E-value=2.9e-23 Score=121.47 Aligned_cols=105 Identities=23% Similarity=0.288 Sum_probs=60.9
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLN 87 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~ 87 (113)
+++..|..|+||+|+++..++...+..+...+...+.++..+.+++++|+..+..+++++|++.|++++.+|..|+||||
T Consensus 29 dvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh 108 (169)
T 4gpm_A 29 DVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLH 108 (169)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHH
Confidence 34556666777776655444333333333333333334444444455555555555666666666666666666666666
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 88 WASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 88 ~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+|+..|+.+++++|+++|++++.+|
T Consensus 109 ~A~~~g~~~~v~~Ll~~gad~~~~d 133 (169)
T 4gpm_A 109 HAAENGHKEVVKLLISKGADVNTSD 133 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHcCCHHHHHHHHHcCCCccccC
Confidence 6666666666666666666666554
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.88 E-value=2.9e-23 Score=121.45 Aligned_cols=103 Identities=19% Similarity=0.244 Sum_probs=81.9
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLN 87 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~ 87 (113)
+++..|..|+||+|+++..++...+..+...+.+++.++..+.+++++|+..+..+++++|++.|++++.+|..|+||||
T Consensus 62 d~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~ 141 (169)
T 4gpm_A 62 DVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLD 141 (169)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred chhhhccCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHH
Confidence 46678889999999988766666666666666666666666667777777777778999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCC
Q psy2938 88 WASAFGTQEMVEFLCERGADVNK 110 (113)
Q Consensus 88 ~A~~~~~~~~v~~Ll~~g~~~~~ 110 (113)
+|+..|+.+++++|+++|++++-
T Consensus 142 ~A~~~g~~~iv~~Ll~~GA~ie~ 164 (169)
T 4gpm_A 142 LAREHGNEEVVKLLEKQGGWLEH 164 (169)
T ss_dssp HHHHTTCHHHHHHHHTC------
T ss_pred HHHHcCCHHHHHHHHHCCCCcCC
Confidence 99999999999999999999864
No 3
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.86 E-value=7.5e-22 Score=104.83 Aligned_cols=93 Identities=22% Similarity=0.203 Sum_probs=75.3
Q ss_pred CCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHcCC
Q psy2938 15 GRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGT 94 (113)
Q Consensus 15 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~~~~~ 94 (113)
.|+||+|+++..++...+..+...+...+.++..+.+++++++..+..+++++|++.|++++.+|..|+||||+|+..|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~ 80 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCC
Confidence 37899998876666555555555555555566666677777777777789999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCC
Q psy2938 95 QEMVEFLCERGAD 107 (113)
Q Consensus 95 ~~~v~~Ll~~g~~ 107 (113)
.+++++|+++|++
T Consensus 81 ~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 81 LEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCC
Confidence 9999999999985
No 4
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.84 E-value=5.3e-21 Score=107.91 Aligned_cols=102 Identities=15% Similarity=0.062 Sum_probs=84.3
Q ss_pred ccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHHH
Q psy2938 11 TFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWAS 90 (113)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~ 90 (113)
..|..|+||+|+++..++...+..+...+...+.++..+.+++++++..+..+++++|++.|++++.+|..|.||||+|+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHH
Confidence 46788999999988766655555555555555555666666777777777778999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCC
Q psy2938 91 AFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 91 ~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
..++.+++++|+++|++++.+|
T Consensus 85 ~~~~~~~v~~Ll~~ga~~~~~~ 106 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYGASRNAVN 106 (137)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCC
T ss_pred HcCCHHHHHHHHHcCCCCCCCC
Confidence 9999999999999999999876
No 5
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.83 E-value=8.6e-21 Score=105.31 Aligned_cols=100 Identities=13% Similarity=-0.018 Sum_probs=77.3
Q ss_pred ccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHc
Q psy2938 13 DVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAF 92 (113)
Q Consensus 13 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~~~ 92 (113)
+..+.+|+|+++..++...+..+...+...+..+..+.+++++|+..+..+++++|++.|++++.+|..|+||||+|+..
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~ 83 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYE 83 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 34567788877765555555544444444554555566667777777777899999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCC
Q psy2938 93 GTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 93 ~~~~~v~~Ll~~g~~~~~~d 112 (113)
++.+++++|+++|++++.+|
T Consensus 84 ~~~~~v~~Ll~~ga~~~~~~ 103 (123)
T 3aaa_C 84 GHVSCVKLLLSKGADKTVKG 103 (123)
T ss_dssp TCHHHHHHHHHTTCCTTCCC
T ss_pred CCHHHHHHHHHcCCCCCCcC
Confidence 99999999999999998876
No 6
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.83 E-value=1.5e-20 Score=110.27 Aligned_cols=105 Identities=14% Similarity=0.175 Sum_probs=87.2
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLN 87 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~ 87 (113)
.++..+..|+||+|+++..++...+..+...+...+..+..+.+++++|+..+..+++++|++.|++++.+|..|.||||
T Consensus 31 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~ 110 (179)
T 3f6q_A 31 DLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLH 110 (179)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred cccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHH
Confidence 46678889999999988766666666655556666655666666777777777778999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 88 WASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 88 ~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+|+..++.+++++|+++|++++.+|
T Consensus 111 ~A~~~~~~~~v~~Ll~~ga~~~~~~ 135 (179)
T 3f6q_A 111 YACFWGQDQVAEDLVANGALVSICN 135 (179)
T ss_dssp HHHHTTCHHHHHHHHHTTCCSSBCC
T ss_pred HHHHcCCHHHHHHHHHCCCCcchhc
Confidence 9999999999999999999998765
No 7
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.83 E-value=1.8e-20 Score=108.51 Aligned_cols=105 Identities=24% Similarity=0.200 Sum_probs=86.9
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLN 87 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~ 87 (113)
.++..+..|+||+|+++..++...+..+...+...+..+..+.+++++++..+..+++++|++.|++++.+|..|+||||
T Consensus 34 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 113 (165)
T 3twr_A 34 NCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLH 113 (165)
T ss_dssp TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred CccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHH
Confidence 44556778899999988777666666666666666666666667777777777778999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 88 WASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 88 ~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+|+..|+.+++++|+++|++++.+|
T Consensus 114 ~A~~~~~~~~v~~Ll~~ga~~~~~~ 138 (165)
T 3twr_A 114 EAAAKGKYEICKLLLQHGADPTKKN 138 (165)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCcccC
Confidence 9999999999999999999998876
No 8
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.82 E-value=2.2e-20 Score=108.82 Aligned_cols=105 Identities=16% Similarity=0.164 Sum_probs=86.7
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLN 87 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~ 87 (113)
.++..+..|+||+|+++..++...+..+...+...+..+..+.++++.++..+..+++++|++.|++++.+|..|.||||
T Consensus 28 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 107 (172)
T 3v30_A 28 LVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLL 107 (172)
T ss_dssp GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHH
T ss_pred cccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 36677889999999988776666666666555555555666666777777777778999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 88 WASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 88 ~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+|+..++.+++++|+++|++++.+|
T Consensus 108 ~A~~~~~~~~v~~Ll~~ga~~~~~~ 132 (172)
T 3v30_A 108 YAVRGNHVKCVEALLARGADLTTEA 132 (172)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHcCCHHHHHHHHHcCCCccccC
Confidence 9999999999999999999998765
No 9
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.82 E-value=9.8e-21 Score=117.77 Aligned_cols=105 Identities=18% Similarity=0.121 Sum_probs=78.1
Q ss_pred hhhccccCCCchhHHHHHh----------hccCccccccc-----------------------cccchhccccchHHHHH
Q psy2938 8 AIQTFDVGRYQPSHCQAAL----------NQEGNIEYKAH-----------------------TKTHKTFKTSNILQLIE 54 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~----------~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~ 54 (113)
+++..|..|+||+|+++.. ..+++++.... .+...+.++..+.++++
T Consensus 78 dvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~ 157 (269)
T 4b93_B 78 GVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLI 157 (269)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHH
T ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 3566788899999987654 34444443321 23334445555566666
Q ss_pred HHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 55 CIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 55 ~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+|+..+..+++++|++.|++++.++..|+||||+|+..|+.++|++|+++|+|++.+|
T Consensus 158 ~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d 215 (269)
T 4b93_B 158 YACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLN 215 (269)
T ss_dssp HHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCC
T ss_pred HHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 6666666678999999999999999999999999999999999999999999998876
No 10
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.82 E-value=2.7e-21 Score=109.08 Aligned_cols=104 Identities=14% Similarity=0.036 Sum_probs=76.5
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCC-CChHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDV-GQTLL 86 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~-g~tpL 86 (113)
+++..+..|.||+|+++..++...+..+...+...+.++..+.+++++++. +..+++++|++.|++++.+|.. |+|||
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L 82 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPV 82 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHH
T ss_pred CccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHH
Confidence 566778888999988776555555555554455555455555555666666 6667888888888888888887 88888
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 87 NWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 87 ~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
|+|+..|+.+++++|+++|++++.+|
T Consensus 83 ~~A~~~~~~~~v~~Ll~~ga~~~~~d 108 (136)
T 1d9s_A 83 HDAAREGFLDTLVVLHRAGARLDVCD 108 (136)
T ss_dssp HHHHHHTCHHHHHHHHHTCCCCCCCS
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCccC
Confidence 88888888888888888888887765
No 11
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.82 E-value=1.1e-20 Score=117.51 Aligned_cols=102 Identities=9% Similarity=0.033 Sum_probs=79.8
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLN 87 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~ 87 (113)
+++..|..|+||+|+++..++...+..+...+..++..+..+.+++++|+..+..+++++|++.|++++.+|..|+||||
T Consensus 144 ~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~ 223 (269)
T 4b93_B 144 KPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVD 223 (269)
T ss_dssp CSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGG
T ss_pred CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 45667889999999999888888888888888888888888778888888877888999999999999999999999999
Q ss_pred HHHHcCC-HHHHHHHHHcCCCCC
Q psy2938 88 WASAFGT-QEMVEFLCERGADVN 109 (113)
Q Consensus 88 ~A~~~~~-~~~v~~Ll~~g~~~~ 109 (113)
+|+.+++ .++++.|...+++++
T Consensus 224 ~A~~~~~i~~lL~~l~~~~~~~~ 246 (269)
T 4b93_B 224 CAEQNSKIMELLQVVPSCVASLD 246 (269)
T ss_dssp GSCTTCHHHHHTTC---------
T ss_pred HHHhCCcHHHHHHHHHHhchhhh
Confidence 9998775 455555655555443
No 12
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.82 E-value=1.7e-21 Score=106.99 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=85.6
Q ss_pred hccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHH
Q psy2938 10 QTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWA 89 (113)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A 89 (113)
...|..|.||+|+++..++-..+..+...+...+..+..+.+++++|+..+..+++++|++.|++++.+|..|+||||+|
T Consensus 3 ~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A 82 (115)
T 2l6b_A 3 MWGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLA 82 (115)
T ss_dssp -CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 35688999999998877666666666655666666666677777777777778899999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 90 SAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 90 ~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+..++.+++++|+++|++++.++
T Consensus 83 ~~~~~~~~~~~Ll~~ga~~n~~~ 105 (115)
T 2l6b_A 83 KKNGHHEIVKLLDAKGADVNARS 105 (115)
T ss_dssp HTTTCHHHHHHHHTTSSSHHHHS
T ss_pred HHCCCHHHHHHHHHcCCCCCcCC
Confidence 99999999999999999987543
No 13
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.82 E-value=3.5e-20 Score=106.28 Aligned_cols=101 Identities=25% Similarity=0.276 Sum_probs=83.2
Q ss_pred cccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHHHH
Q psy2938 12 FDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASA 91 (113)
Q Consensus 12 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~~ 91 (113)
.+..|.||+|+++..++...+..+...+...+..+..+.+++++|+..+..+++++|++.|++++.+|..|.||||+|+.
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~ 109 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATE 109 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence 46779999999887776666666666666555556656666666666666679999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCC
Q psy2938 92 FGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 92 ~~~~~~v~~Ll~~g~~~~~~d 112 (113)
.++.+++++|+++|++++.+|
T Consensus 110 ~~~~~~v~~Ll~~ga~~~~~~ 130 (153)
T 1awc_B 110 HNHQEVVELLIKYGADVHTQS 130 (153)
T ss_dssp TTCHHHHHHHHHTTCCTTCCC
T ss_pred cCCHHHHHHHHHcCCCccccC
Confidence 999999999999999998775
No 14
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.81 E-value=5e-20 Score=107.22 Aligned_cols=105 Identities=24% Similarity=0.255 Sum_probs=85.0
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLN 87 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~ 87 (113)
+++..+..|.||+|+++..++...+..+...+...+..+..+.+++++|+..+..+++++|++.|++++.+|..|.||||
T Consensus 39 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~ 118 (169)
T 2y1l_E 39 DVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLH 118 (169)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 45667889999999988766655555555555555555555666666676666778999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 88 WASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 88 ~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+|+..++.+++++|+++|++++.+|
T Consensus 119 ~A~~~~~~~~v~~Ll~~g~~~~~~~ 143 (169)
T 2y1l_E 119 LAAMFGHLEIVEVLLKNGADVNAQD 143 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 9999999999999999999998765
No 15
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.81 E-value=3.9e-20 Score=114.66 Aligned_cols=105 Identities=10% Similarity=0.031 Sum_probs=84.1
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhcccc-chHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTS-NILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLL 86 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL 86 (113)
.++..+..|.||+|+++..++...+..+...+...+..+. .+.+++++|+..+..+++++|++.|++++.+|..|.|||
T Consensus 150 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL 229 (282)
T 1oy3_D 150 QLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPL 229 (282)
T ss_dssp GTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred cCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHH
Confidence 4567788999999998876665555555555555554443 255555666666666899999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 87 NWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 87 ~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
|+|+..++.+++++|+++|++++.+|
T Consensus 230 ~~A~~~~~~~~v~~Ll~~ga~~~~~~ 255 (282)
T 1oy3_D 230 GSALLRPNPILARLLRAHGAPEPEDG 255 (282)
T ss_dssp HHHHTSSCHHHHHHHHHTTCCCCCCC
T ss_pred HHHHHcCCcHHHHHHHHcCCCcCcCC
Confidence 99999999999999999999999876
No 16
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.81 E-value=3.4e-20 Score=107.60 Aligned_cols=105 Identities=23% Similarity=0.196 Sum_probs=85.1
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLN 87 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~ 87 (113)
.++..+..|+||+|+++..++...+..+...+...+..+..+.++++.++..+..+++++|++.|++++.+|..|.||||
T Consensus 28 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 107 (167)
T 3v31_A 28 VINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLL 107 (167)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHH
T ss_pred CcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHH
Confidence 46677889999999988776666666655555555555555556666666666667999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 88 WASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 88 ~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+|+..|+.+++++|+++|++++.+|
T Consensus 108 ~A~~~~~~~~v~~Ll~~g~~~~~~~ 132 (167)
T 3v31_A 108 YAVHGNHVKCVKMLLESGADPTIET 132 (167)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 9999999999999999999998765
No 17
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.80 E-value=4.3e-20 Score=109.34 Aligned_cols=60 Identities=27% Similarity=0.202 Sum_probs=30.5
Q ss_pred HHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q psy2938 52 LIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNKG 111 (113)
Q Consensus 52 ~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~ 111 (113)
++++|+..+..+++++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++.+
T Consensus 104 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~ 163 (192)
T 2rfm_A 104 PLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISAR 163 (192)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCB
T ss_pred HHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCc
Confidence 333333333334555555555555555555555555555555555555555555555443
No 18
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.80 E-value=8.4e-20 Score=108.09 Aligned_cols=104 Identities=26% Similarity=0.235 Sum_probs=88.8
Q ss_pred hhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHH
Q psy2938 9 IQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNW 88 (113)
Q Consensus 9 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~ 88 (113)
++..|..|+||+|+++..++...+..+...+......+..+.+++++|+..+..+++++|++.|++++.+|..|.||||+
T Consensus 28 ~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 107 (192)
T 2rfm_A 28 RNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMW 107 (192)
T ss_dssp HTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHH
T ss_pred HhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHH
Confidence 45678999999999998887777776666666666666666677777777777789999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 89 ASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 89 A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
|+..++.+++++|+++|++++.+|
T Consensus 108 A~~~~~~~~v~~Ll~~g~~~~~~~ 131 (192)
T 2rfm_A 108 SIIFGYSEMSYFLLEHGANVNDRN 131 (192)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSCCC
T ss_pred HHHcCCHHHHHHHHHCCCCCCCCC
Confidence 999999999999999999998775
No 19
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.79 E-value=6.5e-21 Score=109.75 Aligned_cols=103 Identities=9% Similarity=0.113 Sum_probs=61.3
Q ss_pred hhccccCCCchhHHHHHhhccCccccccccccchhccccchHH-HHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHH
Q psy2938 9 IQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQ-LIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLN 87 (113)
Q Consensus 9 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~ 87 (113)
++..+..|+||+|++. .++...+..+...+...+.++..+.+ ++++|+..+..+++++|++.|++++.+|..|.||||
T Consensus 38 ~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 116 (156)
T 1bi7_B 38 PNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVD 116 (156)
T ss_dssp TTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHH
T ss_pred CCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHH
Confidence 4455666777766542 22222222222333333333444443 555555555556888888888888888888888888
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 88 WASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 88 ~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+|+..++.+++++|+++|++++.++
T Consensus 117 ~A~~~~~~~~v~~Ll~~ga~~~~~~ 141 (156)
T 1bi7_B 117 LAEELGHRDVARYLRAAAGGTRGSN 141 (156)
T ss_dssp HHHHHTCHHHHHHHSSCC-------
T ss_pred HHHHhCHHHHHHHHHHcCCCCCccC
Confidence 8888888888888888888887654
No 20
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.79 E-value=7.4e-20 Score=110.56 Aligned_cols=103 Identities=15% Similarity=0.099 Sum_probs=85.6
Q ss_pred hccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhC-CCCccccCCCCChHHHH
Q psy2938 10 QTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSG-GVEVNFMDDVGQTLLNW 88 (113)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~d~~g~tpL~~ 88 (113)
+..+..|.||+|+++..++...+..+...+...+.++..+.+++++|+..+..+++++|++. |++++.+|..|+||||+
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~ 146 (222)
T 3ehr_A 67 AEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHA 146 (222)
T ss_dssp HHHEEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHH
T ss_pred cccccccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHH
Confidence 34567789999998877766666666656666666666677777777777777899999998 99999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 89 ASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 89 A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
|+..|+.+++++|+++|++++.+|
T Consensus 147 A~~~~~~~~v~~Ll~~ga~~~~~~ 170 (222)
T 3ehr_A 147 AAWKGYADIVQLLLAKGARTDLRN 170 (222)
T ss_dssp HHHHTCHHHHHHHHHHTCCSCCCC
T ss_pred HHHcCCHHHHHHHHHcCCCCcccc
Confidence 999999999999999999998876
No 21
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.79 E-value=2.2e-19 Score=110.43 Aligned_cols=105 Identities=13% Similarity=0.054 Sum_probs=81.4
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLN 87 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~ 87 (113)
.++..+..|.||+|+++..++...+..+...+...+..+..+.+++++|+..+..+++++|++.|++++.+|..|.||||
T Consensus 116 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~ 195 (253)
T 1yyh_A 116 DLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLF 195 (253)
T ss_dssp CTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 45566777888888877666655555555555555555665556666666555667999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 88 WASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 88 ~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+|+..|+.+++++|+++|++++.+|
T Consensus 196 ~A~~~~~~~~v~~Ll~~ga~~~~~d 220 (253)
T 1yyh_A 196 LAAREGSYETAKVLLDHFANRDITD 220 (253)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHCCCHHHHHHHHHcCCCccccc
Confidence 9999999999999999999988765
No 22
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.79 E-value=7.6e-20 Score=103.12 Aligned_cols=100 Identities=22% Similarity=0.223 Sum_probs=65.4
Q ss_pred ccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHc
Q psy2938 13 DVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAF 92 (113)
Q Consensus 13 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~~~ 92 (113)
...+.||+|+|+..++-..+..+...+...+..+..+.+++++|+..+..+++++|++.|++++.+|..|.||||+|+..
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 90 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFI 90 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHc
Confidence 34456677766655555555544444444444444444555555555555677777777888887777888888888888
Q ss_pred CCHHHHHHHHHcCCCCCCCC
Q psy2938 93 GTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 93 ~~~~~v~~Ll~~g~~~~~~d 112 (113)
++.+++++|+++|++++.+|
T Consensus 91 ~~~~~v~~Ll~~g~~~~~~~ 110 (136)
T 2jab_A 91 GHLEIAEVLLKHGADVNAQD 110 (136)
T ss_dssp TCHHHHHHHHHTTCCTTCCC
T ss_pred CCHHHHHHHHHcCCCCcCcC
Confidence 88888888888888777654
No 23
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.79 E-value=5.9e-20 Score=108.26 Aligned_cols=100 Identities=19% Similarity=0.186 Sum_probs=81.9
Q ss_pred cccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccC-CCCChHHHHHH
Q psy2938 12 FDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMD-DVGQTLLNWAS 90 (113)
Q Consensus 12 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d-~~g~tpL~~A~ 90 (113)
.+..|.||+|+++..++...+..+.. +...+..+..+.+++++|+..+..+++++|++.|++++.++ ..|+||||+|+
T Consensus 40 ~~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~ 118 (183)
T 3deo_A 40 VVSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 118 (183)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence 35678899999887766666665555 55555566666666666666666689999999999999998 89999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCC
Q psy2938 91 AFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 91 ~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
..|+.+++++|+++|++++.+|
T Consensus 119 ~~~~~~~v~~Ll~~ga~~~~~d 140 (183)
T 3deo_A 119 GYVRPEVVEALVELGADIEVED 140 (183)
T ss_dssp HTTCHHHHHHHHHHTCCTTCCC
T ss_pred hcCcHHHHHHHHHcCCCCcCCC
Confidence 9999999999999999999876
No 24
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.79 E-value=1.5e-20 Score=106.01 Aligned_cols=99 Identities=9% Similarity=0.117 Sum_probs=75.7
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccc-hHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSN-ILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLL 86 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL 86 (113)
+++..+..|+||+|+++. ++...+..+...+...+.++.. +.+++++|+..+..+++++|++.|++++.+|..|.|||
T Consensus 37 ~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl 115 (136)
T 1d9s_A 37 DPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPV 115 (136)
T ss_dssp CTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHH
T ss_pred CcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHH
Confidence 456678889999988765 4444444444444444444554 45555555555566799999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCC
Q psy2938 87 NWASAFGTQEMVEFLCERGAD 107 (113)
Q Consensus 87 ~~A~~~~~~~~v~~Ll~~g~~ 107 (113)
|+|+..++.+++++|+++|+|
T Consensus 116 ~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 116 DLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp HHHHHHTCHHHHHHHHHHHCC
T ss_pred HHHHHcCCHHHHHHHHHcCCC
Confidence 999999999999999999986
No 25
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.78 E-value=1.5e-19 Score=110.52 Aligned_cols=99 Identities=15% Similarity=0.085 Sum_probs=78.2
Q ss_pred cCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHcC
Q psy2938 14 VGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFG 93 (113)
Q Consensus 14 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~~~~ 93 (113)
..+.||+|.++..++-..+..+...+...+..+..+.+++++|+..++.+++++|++.|++++.+|..|+||||+|+..|
T Consensus 35 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~ 114 (239)
T 1ycs_B 35 PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCN 114 (239)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTT
T ss_pred chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence 45688888887766666666666555555555666666666666666667999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCCCCC
Q psy2938 94 TQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 94 ~~~~v~~Ll~~g~~~~~~d 112 (113)
+.+++++|+++|++++.++
T Consensus 115 ~~~~v~~Ll~~ga~~~~~~ 133 (239)
T 1ycs_B 115 NVQVCKFLVESGAAVFAMT 133 (239)
T ss_dssp CHHHHHHHHHTTCCTTCCC
T ss_pred CHHHHHHHHHcCCCcceec
Confidence 9999999999999998765
No 26
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.78 E-value=4.1e-19 Score=98.30 Aligned_cols=99 Identities=21% Similarity=0.205 Sum_probs=66.8
Q ss_pred hhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHH
Q psy2938 9 IQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNW 88 (113)
Q Consensus 9 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~ 88 (113)
++..+..|.||+|+++..++...+..+...+.....++..+.+++++++..+..+++++|++.|++++.+|..|.||||+
T Consensus 28 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~ 107 (126)
T 1n0r_A 28 VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHL 107 (126)
T ss_dssp TTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHHH
Confidence 44566677888887765554444444444444444444445555555555555667888888888888888888888888
Q ss_pred HHHcCCHHHHHHHHHcCCC
Q psy2938 89 ASAFGTQEMVEFLCERGAD 107 (113)
Q Consensus 89 A~~~~~~~~v~~Ll~~g~~ 107 (113)
|+..++.+++++|+++|+|
T Consensus 108 A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 108 AARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp HHHTTCHHHHHHHHHHTCC
T ss_pred HHHcCcHHHHHHHHHcCCC
Confidence 8888888888888888775
No 27
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.78 E-value=1.1e-19 Score=111.43 Aligned_cols=99 Identities=19% Similarity=0.187 Sum_probs=82.2
Q ss_pred ccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccC-CCCChHHHHHHH
Q psy2938 13 DVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMD-DVGQTLLNWASA 91 (113)
Q Consensus 13 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d-~~g~tpL~~A~~ 91 (113)
+..|.||+|+++..++-..+..+.. +...+.++..+.+++++|+..++.+++++|++.|++++.++ ..|+||||+|+.
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~ 120 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAG 120 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHH
Confidence 4578899999987777666666665 55666666666666766666666689999999999999998 889999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCC
Q psy2938 92 FGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 92 ~~~~~~v~~Ll~~g~~~~~~d 112 (113)
.|+.+++++|+++|++++.+|
T Consensus 121 ~g~~~~v~~Ll~~ga~~~~~d 141 (244)
T 3ui2_A 121 YVRPEVVEALVELGADIEVED 141 (244)
T ss_dssp TTCHHHHHHHHHTTCCTTCCC
T ss_pred cCCHHHHHHHHHCCCCCCCCC
Confidence 999999999999999999876
No 28
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.78 E-value=1.8e-19 Score=109.79 Aligned_cols=102 Identities=12% Similarity=0.071 Sum_probs=81.1
Q ss_pred ccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHHH
Q psy2938 11 TFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWAS 90 (113)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~ 90 (113)
..+..++||+|+++..++...+..+...+...+..+..+.+++++|+..+..+++++|++.|++++.+|..|+||||+|+
T Consensus 16 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~ 95 (229)
T 2vge_A 16 RARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAA 95 (229)
T ss_dssp CTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred ccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 34567778888887766666666555555555555666666777777777778999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCC
Q psy2938 91 AFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 91 ~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
..|+.+++++|+++|++++.++
T Consensus 96 ~~g~~~~v~~Ll~~ga~~~~~~ 117 (229)
T 2vge_A 96 SCNDTVICMALVQHGAAIFATT 117 (229)
T ss_dssp HTTCHHHHHHHHTTTCCTTCCC
T ss_pred HcCCHHHHHHHHHcCCCccccc
Confidence 9999999999999999988764
No 29
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.78 E-value=2.3e-19 Score=102.99 Aligned_cols=103 Identities=11% Similarity=0.090 Sum_probs=79.9
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLN 87 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~ 87 (113)
.++..+..|+||+|+ +..++...+..+...+...+..+..+.+++++|+..+..+++++|++.|++++.+|..|+||||
T Consensus 28 ~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 106 (156)
T 1bd8_A 28 HPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIH 106 (156)
T ss_dssp CTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHH
T ss_pred CccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHH
Confidence 566778889999998 5444444444444444444445555666666777667778999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 88 WASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 88 ~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+|+..|+.+++++|+++ ++++.+|
T Consensus 107 ~A~~~~~~~~v~~Ll~~-~~~~~~~ 130 (156)
T 1bd8_A 107 LAVQEGHTAVVSFLAAE-SDLHRRD 130 (156)
T ss_dssp HHHHHTCHHHHHHHHTT-SCTTCCC
T ss_pred HHHHhChHHHHHHHHhc-cCCCCcC
Confidence 99999999999999988 8888765
No 30
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.78 E-value=5.3e-19 Score=97.83 Aligned_cols=98 Identities=23% Similarity=0.239 Sum_probs=75.9
Q ss_pred CCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHcCC
Q psy2938 15 GRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGT 94 (113)
Q Consensus 15 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~~~~~ 94 (113)
.|.||+|.++..++-..+..+...+......+..+.++++.++..+..+++++|++.|++++.+|..|.||||+|+..++
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~ 80 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH 80 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence 37888888776655555555444444444444455555666665556679999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCC
Q psy2938 95 QEMVEFLCERGADVNKGK 112 (113)
Q Consensus 95 ~~~v~~Ll~~g~~~~~~d 112 (113)
.+++++|+++|++++.+|
T Consensus 81 ~~~~~~Ll~~g~~~~~~~ 98 (126)
T 1n0r_A 81 LEVVKLLLEAGADVNAKD 98 (126)
T ss_dssp HHHHHHHHHTTCCTTCCC
T ss_pred HHHHHHHHHcCCCCcccC
Confidence 999999999999998765
No 31
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.77 E-value=3.6e-19 Score=100.32 Aligned_cols=98 Identities=14% Similarity=0.103 Sum_probs=78.1
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLN 87 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~ 87 (113)
+++..|..|+||+|+++..++...+..+...+...+..+..+.+++++|+..+..+++++|++.|++++.+|..|.||||
T Consensus 39 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~ 118 (136)
T 2jab_A 39 DVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFD 118 (136)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHH
Confidence 45677888999999988766655555555555555555555556666666666667999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcC
Q psy2938 88 WASAFGTQEMVEFLCERG 105 (113)
Q Consensus 88 ~A~~~~~~~~v~~Ll~~g 105 (113)
+|+..++.+++++|++.|
T Consensus 119 ~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 119 ISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHTTCHHHHHHHHHC-
T ss_pred HHHHCCCHHHHHHHHHcC
Confidence 999999999999999876
No 32
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.77 E-value=6.5e-19 Score=107.06 Aligned_cols=105 Identities=13% Similarity=0.104 Sum_probs=79.8
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccc-cchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKT-SNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLL 86 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL 86 (113)
.++..+..|.||+|+++..++...+..+...+......+ ..+.++++.|+..+..+++++|++.|++++.+|..|.|||
T Consensus 108 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 187 (241)
T 1k1a_A 108 DLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSAL 187 (241)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHH
T ss_pred cccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 445567778888888776555555555554454444444 4455566666666666799999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 87 NWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 87 ~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
|+|+..|+.+++++|+++|++++.+|
T Consensus 188 ~~A~~~~~~~~v~~Ll~~ga~~~~~~ 213 (241)
T 1k1a_A 188 HSASGRGLLPLVRTLVRSGADSSLKN 213 (241)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHHcCCHHHHHHHHhcCCCCCCcC
Confidence 99999999999999999999998775
No 33
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.77 E-value=9.1e-20 Score=104.94 Aligned_cols=102 Identities=15% Similarity=0.021 Sum_probs=81.8
Q ss_pred hccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCCh-HHHH
Q psy2938 10 QTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQT-LLNW 88 (113)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~t-pL~~ 88 (113)
...+..+.||+|+++..++...+..+...+...+..+..+.+++++|+ .+..+++++|++.|++++.+|..|+| |||+
T Consensus 6 ~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~ 84 (156)
T 1bi7_B 6 GSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHD 84 (156)
T ss_dssp ----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHH
T ss_pred cCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCCCcHHHHH
Confidence 445678899999988777666666666666666666666666677765 55667999999999999999999999 9999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 89 ASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 89 A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
|+..|+.+++++|+++|++++.+|
T Consensus 85 A~~~~~~~~v~~Ll~~ga~~~~~d 108 (156)
T 1bi7_B 85 AAREGFLDTLVVLHRAGARLDVRD 108 (156)
T ss_dssp HHHHTCHHHHHHHHHHTCCSSCCC
T ss_pred HHHCCCHHHHHHHHHcCCCCcccC
Confidence 999999999999999999999875
No 34
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.77 E-value=1.9e-19 Score=103.85 Aligned_cols=104 Identities=15% Similarity=0.094 Sum_probs=63.4
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLN 87 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~ 87 (113)
+++..+..|+||+|++.. ++...+..+...+...+.++..+.++++.++..+..+++++|++.|++++.+|..|.||||
T Consensus 30 ~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 108 (162)
T 1ihb_A 30 NVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLH 108 (162)
T ss_dssp CTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 345566677777776543 3333333333333333333344444444444444556777777777888877777888888
Q ss_pred HHHHcCCHHHHHHHHHcCCC-CCCCC
Q psy2938 88 WASAFGTQEMVEFLCERGAD-VNKGK 112 (113)
Q Consensus 88 ~A~~~~~~~~v~~Ll~~g~~-~~~~d 112 (113)
+|+..|+.+++++|+++|++ ++.+|
T Consensus 109 ~A~~~~~~~~v~~Ll~~g~~~~~~~~ 134 (162)
T 1ihb_A 109 LAAKEGHLRVVEFLVKHTASNVGHRN 134 (162)
T ss_dssp HHHHTTCHHHHHHHHHHSCCCTTCCC
T ss_pred HHHHcCCHHHHHHHHHccCCCCCCcC
Confidence 88888888888888877776 35443
No 35
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.77 E-value=4.7e-19 Score=102.15 Aligned_cols=100 Identities=13% Similarity=0.109 Sum_probs=81.5
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCC-ccccCCCCChHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVE-VNFMDDVGQTLL 86 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~-~~~~d~~g~tpL 86 (113)
+++..+..|+||+|+++..++...+..+...+...+.++..+.+++++|+..+..+++++|++.|++ ++.+|..|.|||
T Consensus 62 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l 141 (162)
T 1ihb_A 62 NPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTAC 141 (162)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHH
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHH
Confidence 4566788999999998877766666666666666666666677777777777777899999999998 689999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCC
Q psy2938 87 NWASAFGTQEMVEFLCERGAD 107 (113)
Q Consensus 87 ~~A~~~~~~~~v~~Ll~~g~~ 107 (113)
|+|+..|+.+++++|+++|+|
T Consensus 142 ~~A~~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 142 DLARLYGRNEVVSLMQANGAG 162 (162)
T ss_dssp HHHHHTTCHHHHHHHHHTC--
T ss_pred HHHHHcCCHHHHHHHHHhCCC
Confidence 999999999999999999986
No 36
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.77 E-value=6.4e-19 Score=106.40 Aligned_cols=105 Identities=18% Similarity=0.081 Sum_probs=66.3
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCC-CCccccCCCCChHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGG-VEVNFMDDVGQTLL 86 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~d~~g~tpL 86 (113)
+++..+..|.||+|+++..++-..+..+...+...+.++..+.+++++|+..+..+++++|++.| ++++.+|..|+|||
T Consensus 99 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L 178 (228)
T 2dzn_A 99 DLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPL 178 (228)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHH
T ss_pred ccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHH
Confidence 34445556666666655444333333333334444444444555555555555556777777777 77777777788888
Q ss_pred HHHHHcCCHHHHHHHH-HcCCCCCCCC
Q psy2938 87 NWASAFGTQEMVEFLC-ERGADVNKGK 112 (113)
Q Consensus 87 ~~A~~~~~~~~v~~Ll-~~g~~~~~~d 112 (113)
|+|+..++.+++++|+ +.|++++.+|
T Consensus 179 ~~A~~~~~~~~v~~Ll~~~ga~~~~~~ 205 (228)
T 2dzn_A 179 FHALAEGHGDAAVLLVEKYGAEYDLVD 205 (228)
T ss_dssp HHHHHTTCHHHHHHHHHHHCCCSCCBC
T ss_pred HHHHHcCCHHHHHHHHHhcCCCCCccC
Confidence 8888888888888877 6777777654
No 37
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.77 E-value=6.3e-19 Score=109.07 Aligned_cols=106 Identities=18% Similarity=0.181 Sum_probs=79.1
Q ss_pred hhhccccCCCchhHHHHHhhc----cCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHh-CCCCccccCCCC
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQ----EGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDS-GGVEVNFMDDVG 82 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~~~~~~~~d~~g 82 (113)
+++..+..|.||+|+++..++ ...+..+...+...+.++..+.++++.|+..+..+++++|++ .|++++.+|..|
T Consensus 174 ~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g 253 (285)
T 1wdy_A 174 DVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDG 253 (285)
T ss_dssp CTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTS
T ss_pred CCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCC
Confidence 445567778888877764443 112222333444444445556666666666666779999998 899999999999
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q psy2938 83 QTLLNWASAFGTQEMVEFLCERGADVNKGKL 113 (113)
Q Consensus 83 ~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~d~ 113 (113)
.||||+|+..++.+++++|+++|++++.+|+
T Consensus 254 ~t~l~~A~~~~~~~i~~~Ll~~Ga~~~~~d~ 284 (285)
T 1wdy_A 254 KTALLLAVELKLKKIAELLCKRGASTDCGDL 284 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHSSCSCCSSC
T ss_pred CcHHHHHHHcCcHHHHHHHHHcCCCCCcccc
Confidence 9999999999999999999999999999884
No 38
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.77 E-value=9.7e-19 Score=105.37 Aligned_cols=104 Identities=13% Similarity=0.056 Sum_probs=65.8
Q ss_pred hhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHH
Q psy2938 9 IQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNW 88 (113)
Q Consensus 9 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~ 88 (113)
++..+..|.||+|+++..++...+..+...+...+..+..+.+++++|+..+..+++++|++.|++++.+|..|.||||+
T Consensus 85 ~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 164 (223)
T 2f8y_A 85 LDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFL 164 (223)
T ss_dssp TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred cccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHH
Confidence 34455566666666655444444444444444444444445555555555555567777777777777777777777777
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 89 ASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 89 A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
|+..|+.+++++|+++|++++.+|
T Consensus 165 A~~~~~~~~v~~Ll~~ga~~~~~~ 188 (223)
T 2f8y_A 165 AAREGSYETAKVLLDHFANRDITD 188 (223)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHcCCHHHHHHHHHcCCCCcccc
Confidence 777777777777777777777654
No 39
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.77 E-value=7.9e-19 Score=106.24 Aligned_cols=102 Identities=17% Similarity=0.121 Sum_probs=62.0
Q ss_pred ccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHHH
Q psy2938 11 TFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWAS 90 (113)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~ 90 (113)
..+..|.||+|+++..++...+..+...+......+..+.++++.++..+..+++++|++.|++++.+|..|.||||+|+
T Consensus 101 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 180 (231)
T 3aji_A 101 AVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLAC 180 (231)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHH
Confidence 34444555555544333322222222223333333344444444444444556778888888888888888888888888
Q ss_pred HcCCHHHHHHHHHcCCCCCCCC
Q psy2938 91 AFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 91 ~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
..++.+++++|+++|++++.+|
T Consensus 181 ~~~~~~~v~~Ll~~ga~~~~~~ 202 (231)
T 3aji_A 181 DEERVEEAKFLVTQGASIYIEN 202 (231)
T ss_dssp HTTCHHHHHHHHHTTCCSCCCC
T ss_pred HCCCHHHHHHHHHCCCCCCCCC
Confidence 8888888888888888877665
No 40
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.77 E-value=8.4e-19 Score=106.27 Aligned_cols=105 Identities=16% Similarity=0.172 Sum_probs=74.2
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccch-----hccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCC--
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHK-----TFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDD-- 80 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~-- 80 (113)
+++..|..|+||+|+++..++...+..+...+... ...+..+.+++++|+..+..+++++|++.|++++..+.
T Consensus 29 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~ 108 (232)
T 2rfa_A 29 EVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGS 108 (232)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSG
T ss_pred CcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCc
Confidence 45667888889998887766655555544333332 22233455556666655666788888888888887764
Q ss_pred -----------CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 81 -----------VGQTLLNWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 81 -----------~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
.|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 109 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d 151 (232)
T 2rfa_A 109 VFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQD 151 (232)
T ss_dssp GGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred ceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence 68888888888888888888888888888765
No 41
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.76 E-value=6.2e-19 Score=110.16 Aligned_cols=99 Identities=10% Similarity=0.074 Sum_probs=78.9
Q ss_pred hccccCCCchhHHHHHh---hccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHH
Q psy2938 10 QTFDVGRYQPSHCQAAL---NQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLL 86 (113)
Q Consensus 10 ~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL 86 (113)
+..+..|.||+|+++.. ++...+..+...+..++.++..+.+++++|+..+..+++++|++.|++++.+|..|.|||
T Consensus 163 ~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL 242 (278)
T 1dcq_A 163 ANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPL 242 (278)
T ss_dssp SSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred cccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHH
Confidence 34477899999999876 444445555555666666666666777777777777899999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCC
Q psy2938 87 NWASAFGTQEMVEFLCERGADV 108 (113)
Q Consensus 87 ~~A~~~~~~~~v~~Ll~~g~~~ 108 (113)
|+|+..|+.+++++|+++|++.
T Consensus 243 ~~A~~~~~~~~v~~Ll~~ga~~ 264 (278)
T 1dcq_A 243 DIAKRLKHEHCEELLTQALSGR 264 (278)
T ss_dssp HHHHHTTCHHHHHHHHHHHTTC
T ss_pred HHHHHcCCHHHHHHHHHcCCCC
Confidence 9999999999999999998864
No 42
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.76 E-value=5.6e-19 Score=117.82 Aligned_cols=100 Identities=13% Similarity=0.057 Sum_probs=75.1
Q ss_pred ccCCCchhHHHHH---hhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHH
Q psy2938 13 DVGRYQPSHCQAA---LNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWA 89 (113)
Q Consensus 13 ~~~~~~~~~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A 89 (113)
+..|+||+|+++. .++-..+..+...+.+.+.++..+.+++++|+..++.+++++|++.|++++.+|..|.||||+|
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 247 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIA 247 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHHHH
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 6789999999954 2332333444444555555566666777777777777899999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 90 SAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 90 ~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+..|+.+++++|+++|++++..+
T Consensus 248 ~~~~~~~~~~~Ll~~ga~~~~~~ 270 (497)
T 3lvq_E 248 RKKHHKECEELLEQAQAGTFAFP 270 (497)
T ss_dssp HHTTCHHHHHHHHHTCC------
T ss_pred HHcCCHHHHHHHHHhCCCCCCCc
Confidence 99999999999999999988643
No 43
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.76 E-value=2.2e-18 Score=105.94 Aligned_cols=101 Identities=11% Similarity=-0.003 Sum_probs=80.4
Q ss_pred cccCCCchhHHHHHh---hccCccccccccccchhc-----------cccchHHHHHHHHhCCHHHHHHHHHhCCCCccc
Q psy2938 12 FDVGRYQPSHCQAAL---NQEGNIEYKAHTKTHKTF-----------KTSNILQLIECIRSKDTDALIETIDSGGVEVNF 77 (113)
Q Consensus 12 ~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~ 77 (113)
.|..|+||+|+++.. ++...+..+...+..... .+..+.+++++|+..+..+++++|++.|++++.
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~ 118 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHL 118 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence 688999999999987 776666666544333221 123455666666666667899999999999999
Q ss_pred cCCC-------------CChHHHHHHHcCCHHHHHHHHH---cCCCCCCCC
Q psy2938 78 MDDV-------------GQTLLNWASAFGTQEMVEFLCE---RGADVNKGK 112 (113)
Q Consensus 78 ~d~~-------------g~tpL~~A~~~~~~~~v~~Ll~---~g~~~~~~d 112 (113)
.+.. |.||||+|+..|+.+++++|++ +|++++.+|
T Consensus 119 ~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d 169 (256)
T 2etb_A 119 RACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATD 169 (256)
T ss_dssp CCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCC
T ss_pred ccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccC
Confidence 9876 9999999999999999999999 999999876
No 44
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.76 E-value=1.2e-18 Score=105.91 Aligned_cols=67 Identities=25% Similarity=0.285 Sum_probs=50.9
Q ss_pred ccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCC-CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 46 TSNILQLIECIRSKDTDALIETIDSGGVEVNFMDD-VGQTLLNWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~-~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+..+.+++++|+..+..+++++|++.|++++.++. .|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 114 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~ 181 (236)
T 1ikn_D 114 NYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVT 181 (236)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccc
Confidence 33344555555555556788888888888888886 88888888888888888888888888887765
No 45
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.76 E-value=1e-18 Score=114.39 Aligned_cols=103 Identities=16% Similarity=0.094 Sum_probs=74.7
Q ss_pred hccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHH
Q psy2938 10 QTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWA 89 (113)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A 89 (113)
+..+..|.||+|+++..++...+..+...+...+..+..+.+++++|+..+..+++++|++.|++++.+|..|+||||+|
T Consensus 272 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A 351 (437)
T 1n11_A 272 NLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQA 351 (437)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHH
Confidence 34455666666665544443333333334444444455555666666666666799999999999999999999999999
Q ss_pred HHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 90 SAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 90 ~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+..|+.+++++|+++|++++.+|
T Consensus 352 ~~~g~~~iv~~Ll~~ga~~~~~~ 374 (437)
T 1n11_A 352 AQQGHTDIVTLLLKNGASPNEVS 374 (437)
T ss_dssp HHTTCHHHHHHHHHTTCCSCCCC
T ss_pred HHCChHHHHHHHHHCcCCCCCCC
Confidence 99999999999999999998765
No 46
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.76 E-value=1.2e-18 Score=105.76 Aligned_cols=105 Identities=10% Similarity=0.113 Sum_probs=74.3
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLN 87 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~ 87 (113)
.++..+..|+||+|+++..++...+..+...+......+..+.++++.++..+..+++++|++.|++++.+|..|.||||
T Consensus 103 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~ 182 (237)
T 3b7b_A 103 DVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLH 182 (237)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHH
T ss_pred CcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 34455667778877766555444444444444444444455555555555555567888888888888888888889999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 88 WASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 88 ~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+|+..++.+++++|+++|++++.+|
T Consensus 183 ~A~~~~~~~~v~~Ll~~gad~~~~d 207 (237)
T 3b7b_A 183 IAARENRYDCVVLFLSRDSDVTLKN 207 (237)
T ss_dssp HHHHTTCHHHHHHHHTTTCCTTCCC
T ss_pred HHHHhCCHhHHHHHHHcCCCCCccC
Confidence 9999889999999888888888765
No 47
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.75 E-value=2e-19 Score=106.58 Aligned_cols=95 Identities=7% Similarity=0.058 Sum_probs=62.6
Q ss_pred hhccc-cCCCchhHHHH--------------HhhccCccccccccccchhccccchHHHHHHHHhCC-----HHHHHHHH
Q psy2938 9 IQTFD-VGRYQPSHCQA--------------ALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKD-----TDALIETI 68 (113)
Q Consensus 9 ~~~~~-~~~~~~~~~~~--------------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~L 68 (113)
.+..+ ..|+||+|+++ |+.+|++++..+ ..+.++++.++..+. ..+++++|
T Consensus 30 ~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d---------~~g~TpLh~a~~~~~~~~~~~~~iv~~L 100 (186)
T 3t8k_A 30 YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRT---------KEGTTLFFPLFQGGGNDITGTTELCKIF 100 (186)
T ss_dssp SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCC---------TTCCCTHHHHHHHCTTCHHHHHHHHHHH
T ss_pred cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCC---------CCCCcHHHHHHHcCCcchhhHHHHHHHH
Confidence 34444 56888888765 344455555443 233344444444443 14678888
Q ss_pred HhCCCCccccCCCCC-hHHHHHHHcC-----CHHHHHHHHH-cCCCCCCCC
Q psy2938 69 DSGGVEVNFMDDVGQ-TLLNWASAFG-----TQEMVEFLCE-RGADVNKGK 112 (113)
Q Consensus 69 ~~~~~~~~~~d~~g~-tpL~~A~~~~-----~~~~v~~Ll~-~g~~~~~~d 112 (113)
++.|++++.+|..|+ ||||+|+..+ +.+++++|++ +|++++.+|
T Consensus 101 l~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d 151 (186)
T 3t8k_A 101 LEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKD 151 (186)
T ss_dssp HHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCC
T ss_pred HHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccC
Confidence 888888888888888 8888888743 3568888888 888888766
No 48
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.75 E-value=2.4e-18 Score=109.27 Aligned_cols=105 Identities=21% Similarity=0.104 Sum_probs=86.8
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLN 87 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~ 87 (113)
.++..|..|.||+|+++..++-..+..+...+...+..+..+.+++++|+..++.+++++|++.|++++..|..|.||||
T Consensus 50 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~ 129 (351)
T 3utm_A 50 NCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLH 129 (351)
T ss_dssp TCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred CcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 45567888999999988777766666666666666666666667777777777778999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 88 WASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 88 ~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+|+..|+.+++++|+++|++++..+
T Consensus 130 ~A~~~~~~~~v~~Ll~~g~~~~~~~ 154 (351)
T 3utm_A 130 EAASKNRVEVCSLLLSHGADPTLVN 154 (351)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHcCCHHHHHHHHHcCCCCcccc
Confidence 9999999999999999999988654
No 49
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.75 E-value=6.2e-19 Score=110.29 Aligned_cols=103 Identities=15% Similarity=0.073 Sum_probs=79.8
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLN 87 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~ 87 (113)
.++..|..|+||+|+++..++...+..+...+...+..+ +.+++++|+..+..+++++|++.|++++.+|..|+||||
T Consensus 23 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~L~ 100 (285)
T 3kea_A 23 DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALY 100 (285)
T ss_dssp TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT--TCCHHHHHTTSSSCHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHH
Confidence 467788899999999887766666666665555555442 455566666666667888898889999988889999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 88 WASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 88 ~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+|+..|+.+++++|+++|++++.+|
T Consensus 101 ~A~~~g~~~~v~~Ll~~ga~~~~~~ 125 (285)
T 3kea_A 101 YAVDSGNMQTVKLFVKKNWRLMFYG 125 (285)
T ss_dssp HHHHTTCHHHHHHHHHHCGGGGGCS
T ss_pred HHHHcCCHHHHHHHHhcCCCCCccC
Confidence 9999999999999999998887654
No 50
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.75 E-value=2.2e-18 Score=107.73 Aligned_cols=106 Identities=17% Similarity=0.110 Sum_probs=84.5
Q ss_pred hhhhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChH
Q psy2938 6 SKAIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTL 85 (113)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tp 85 (113)
...+...+..|+||+|+++..++...+..+...+...+.++..+.+++++|+..+..+++++|++.|++++.+|..|.||
T Consensus 49 ~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~ 128 (285)
T 3d9h_A 49 SNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTP 128 (285)
T ss_dssp CCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCTTCCCH
T ss_pred hCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCH
Confidence 44566678899999999887666666665555555555566666667777777777789999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCC
Q psy2938 86 LNWASAFGTQEMVEFLCERGADVNKG 111 (113)
Q Consensus 86 L~~A~~~~~~~~v~~Ll~~g~~~~~~ 111 (113)
||+|+..|+.+++++|+++|++++..
T Consensus 129 L~~A~~~~~~~~v~~Ll~~g~~~~~~ 154 (285)
T 3d9h_A 129 LFNACVSGSWDCVNLLLQHGASVQPE 154 (285)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSCS
T ss_pred HHHHHHcCHHHHHHHHHHCCCCCCCC
Confidence 99999999999999999999887754
No 51
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.75 E-value=6.7e-19 Score=102.53 Aligned_cols=105 Identities=10% Similarity=0.024 Sum_probs=86.3
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLN 87 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~ 87 (113)
+++..+..|.||+|+++..++...+..+...+...+.++..+.+++++|+..+..+++++|++.|++++.+|..|.||||
T Consensus 61 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 140 (172)
T 3v30_A 61 DPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMD 140 (172)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CchhhcccCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHH
Confidence 45667889999999988777666666666666666666666667777777777778999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 88 WASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 88 ~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+|+..++.+++++|+++|+++..++
T Consensus 141 ~A~~~~~~~~~~~L~~~~~~~~~~~ 165 (172)
T 3v30_A 141 LAVALGYRKVQQVIENHILKLFQSN 165 (172)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHSCC-
T ss_pred HHHHhCcHHHHHHHHHHHHHHhccc
Confidence 9999999999999999988766543
No 52
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.74 E-value=2.4e-18 Score=99.77 Aligned_cols=98 Identities=15% Similarity=0.171 Sum_probs=78.6
Q ss_pred CCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHcCC
Q psy2938 15 GRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGT 94 (113)
Q Consensus 15 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~~~~~ 94 (113)
.|.||+|.++..++-..+..+...+...+..+..+.+++++|+..+..+++++|++.|++++..+..|.||||+|+..++
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~ 81 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY 81 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence 46788888876666555555554444455555556666667766667789999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCCCCC
Q psy2938 95 QEMVEFLCERGADVNKGK 112 (113)
Q Consensus 95 ~~~v~~Ll~~g~~~~~~d 112 (113)
.+++++|+++|++++.+|
T Consensus 82 ~~~v~~Ll~~g~~~~~~~ 99 (167)
T 3v31_A 82 TDIVKMLLDCGVDVNEYD 99 (167)
T ss_dssp HHHHHHHHHHTCCTTCCC
T ss_pred HHHHHHHHHCCCCCCcCC
Confidence 999999999999998765
No 53
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.74 E-value=8.5e-19 Score=112.53 Aligned_cols=101 Identities=14% Similarity=0.104 Sum_probs=76.7
Q ss_pred cccCCCchhHHHHHhh--ccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCC-----ccccCCCCCh
Q psy2938 12 FDVGRYQPSHCQAALN--QEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVE-----VNFMDDVGQT 84 (113)
Q Consensus 12 ~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~-----~~~~d~~g~t 84 (113)
.+..|.||+|+++..+ +...+..+...+...+..+..+.+++++|+..+..+++++|++.|++ ++..|..|+|
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t 213 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNS 213 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCC
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCc
Confidence 6777888888887666 55555555555666665666666666666666666788888887777 8888888888
Q ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 85 LLNWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 85 pL~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
|||+|+..|+.+++++|+++|++++.+|
T Consensus 214 ~L~~A~~~g~~~~v~~Ll~~gad~~~~d 241 (364)
T 3ljn_A 214 HLHWAILINWEDVAMRFVEMGIDVNMED 241 (364)
T ss_dssp TTHHHHTTTCHHHHHHHHTTTCCTTCCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 8888888888888888888888888765
No 54
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.74 E-value=3.7e-18 Score=103.30 Aligned_cols=102 Identities=18% Similarity=0.189 Sum_probs=45.2
Q ss_pred hhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHH
Q psy2938 9 IQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNW 88 (113)
Q Consensus 9 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~ 88 (113)
++..+..|.||+|+++..++-..+..+...+...+..+..+.++++.|+..+..+++++|++.|++++.+|..|.||||+
T Consensus 33 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~ 112 (231)
T 3aji_A 33 ATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHY 112 (231)
T ss_dssp GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred hhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence 34445556666665554433333333333333332223333333333333333344444444455555444445555555
Q ss_pred HHHcCCHHHHHHHHHcCCCCCC
Q psy2938 89 ASAFGTQEMVEFLCERGADVNK 110 (113)
Q Consensus 89 A~~~~~~~~v~~Ll~~g~~~~~ 110 (113)
|+..++.+++++|+++|++++.
T Consensus 113 A~~~~~~~~~~~Ll~~g~~~~~ 134 (231)
T 3aji_A 113 AASKNRHEIAVMLLEGGANPDA 134 (231)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTC
T ss_pred HHHcCCHHHHHHHHHcCCCCCC
Confidence 5555555555555554444443
No 55
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.74 E-value=1.3e-18 Score=108.40 Aligned_cols=105 Identities=15% Similarity=0.180 Sum_probs=78.0
Q ss_pred hhhccccCCCchhHHHHH----------hhccC-ccccccccc---cc-------------------------hhccccc
Q psy2938 8 AIQTFDVGRYQPSHCQAA----------LNQEG-NIEYKAHTK---TH-------------------------KTFKTSN 48 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l----------~~~~~-~~~~~~~~~---~~-------------------------~~~~~~~ 48 (113)
.++..|..|+||+|+++. +..|+ +++..+..+ ++ ....+..
T Consensus 103 ~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~ 182 (276)
T 4hbd_A 103 VVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQA 182 (276)
T ss_dssp HHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTT
T ss_pred cCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCC
Confidence 467788889999888653 55565 555444221 11 1112233
Q ss_pred hHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHcCCHHHHHHHHH-cCCCCCCCC
Q psy2938 49 ILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCE-RGADVNKGK 112 (113)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~-~g~~~~~~d 112 (113)
+.+++++|+..+..+++++|++.|++++.+|..|+||||+|+..|+.+++++|++ .|++++.+|
T Consensus 183 g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d 247 (276)
T 4hbd_A 183 GQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTD 247 (276)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcC
Confidence 4455555655566679999999999999999999999999999999999999999 899999876
No 56
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.74 E-value=1.6e-18 Score=106.57 Aligned_cols=103 Identities=17% Similarity=0.271 Sum_probs=66.5
Q ss_pred hccccCCCchhHHHHHhhccCcccccccccc-chhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHH
Q psy2938 10 QTFDVGRYQPSHCQAALNQEGNIEYKAHTKT-HKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNW 88 (113)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~ 88 (113)
+..+..|+||+|+++..++...+..+...+. .....+..+.+++++++..+..+++++|++.|++++.+|..|.||||+
T Consensus 84 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~ 163 (253)
T 1yyh_A 84 NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHW 163 (253)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHH
Confidence 3344455555555544433333333332221 333334444455555555455568888888888888888889999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 89 ASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 89 A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
|+..|+.+++++|+++|++++.+|
T Consensus 164 A~~~~~~~~v~~Ll~~ga~~~~~~ 187 (253)
T 1yyh_A 164 AAAVNNVDAAVVLLKNGANKDMQN 187 (253)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcC
Confidence 999999999999998888888765
No 57
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.74 E-value=7.9e-18 Score=102.84 Aligned_cols=99 Identities=18% Similarity=0.173 Sum_probs=55.1
Q ss_pred ccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHc
Q psy2938 13 DVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAF 92 (113)
Q Consensus 13 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~~~ 92 (113)
+..|.||+|.+...+....+..+...+........+.++++.++..++. +++++|++.|++++.+|..|+||||+|+..
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~~~~~t~L~~A~~~g~~-~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~ 80 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNPLPLALLLDSSLEGEF-DLVQRIIYEVDDPSLPNDEGITALHNAVCA 80 (239)
T ss_dssp -----------------------------------CHHHHHHHHHHTCH-HHHHHHTSTTSSCCCCCTTSCCHHHHHHHH
T ss_pred CccccccCchhhhhhhHHHHHHHhccCCCcccCchhhHHHHHHHHcCCH-HHHHHHHHcCCCCCCcCCCCCCHHHHHHHc
Confidence 3468899999888777777777776666666554445555555555554 689999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCCC
Q psy2938 93 GTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 93 ~~~~~v~~Ll~~g~~~~~~d 112 (113)
|+.+++++|+++|++++.+|
T Consensus 81 g~~~~v~~Ll~~ga~~~~~d 100 (239)
T 1ycs_B 81 GHTEIVKFLVQFGVNVNAAD 100 (239)
T ss_dssp TCHHHHHHHHHHTCCTTCCC
T ss_pred CCHHHHHHHHHcCCCCCccC
Confidence 99999999999999999876
No 58
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.74 E-value=2.7e-18 Score=105.99 Aligned_cols=103 Identities=11% Similarity=0.033 Sum_probs=63.3
Q ss_pred hhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHH
Q psy2938 9 IQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNW 88 (113)
Q Consensus 9 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~ 88 (113)
++..|..|.||+|+++..++...+..+...+...+..+..+.+++++|+..+..+++++|++.|++++. +..|.||||+
T Consensus 29 ~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~L~~ 107 (261)
T 2xai_A 29 VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP-ESDLASPIHE 107 (261)
T ss_dssp SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-SCTTCCHHHH
T ss_pred CCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-CCCCCCHHHH
Confidence 445566666777766666665555555555555555555555555555554555566666666666664 3346677777
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 89 ASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 89 A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
|+..|+.+++++|+++|++++.+|
T Consensus 108 A~~~~~~~~v~~Ll~~g~~~~~~~ 131 (261)
T 2xai_A 108 AARRGHVECVNSLIAYGGNIDHKI 131 (261)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCB
T ss_pred HHHcCcHHHHHHHHHcCCCCCcCC
Confidence 777777777777777776666543
No 59
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.74 E-value=7.1e-18 Score=101.79 Aligned_cols=101 Identities=18% Similarity=0.204 Sum_probs=66.7
Q ss_pred cccCCCchhHHHHHhhccCccccccccc--cchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHH
Q psy2938 12 FDVGRYQPSHCQAALNQEGNIEYKAHTK--THKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWA 89 (113)
Q Consensus 12 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A 89 (113)
.+..|+||+|+++..++...+..+...+ ......+..+.++++.++..+..+++++|++.|++++.+|..|.||||+|
T Consensus 68 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A 147 (228)
T 2dzn_A 68 PDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRA 147 (228)
T ss_dssp CCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHH
Confidence 4556666766666554444444444333 34444444455555555555566677888888888888888888888888
Q ss_pred HHcCCHHHHHHHHHcC-CCCCCCC
Q psy2938 90 SAFGTQEMVEFLCERG-ADVNKGK 112 (113)
Q Consensus 90 ~~~~~~~~v~~Ll~~g-~~~~~~d 112 (113)
+..|+.+++++|++.| ++++.+|
T Consensus 148 ~~~~~~~~v~~Ll~~g~~~~~~~d 171 (228)
T 2dzn_A 148 ASVGSLKLIELLCGLGKSAVNWQD 171 (228)
T ss_dssp HHTTCHHHHHHHHTTTCCCSCCCC
T ss_pred HHcCCHHHHHHHHhcCcccccCcC
Confidence 8888888888888877 7777654
No 60
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.74 E-value=1.5e-19 Score=110.13 Aligned_cols=105 Identities=9% Similarity=0.048 Sum_probs=87.0
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccC-CCCChHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMD-DVGQTLL 86 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d-~~g~tpL 86 (113)
+++..|..|+||+|+++..++...+..+...+...+.++..+.+++++|+..+..+++++|++.|++++..+ ..|+|||
T Consensus 46 ~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL 125 (229)
T 2vge_A 46 DPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAF 125 (229)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTG
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHH
Confidence 566788899999999887666666666666666666666666677777777777789999999999999986 6999999
Q ss_pred HHH--HHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 87 NWA--SAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 87 ~~A--~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
|+| +..++.+++++|+++|++++.+|
T Consensus 126 ~~A~a~~~~~~~~v~~Ll~~ga~~~~~~ 153 (229)
T 2vge_A 126 EKCDPYREGYADCATYLADVEQSMGLMN 153 (229)
T ss_dssp GGCCTTSTTHHHHHHHHHHHHHHTTTSG
T ss_pred HHHHHHhcChHHHHHHHHHcCCCccccc
Confidence 999 99999999999999999988764
No 61
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.74 E-value=1.9e-18 Score=113.10 Aligned_cols=105 Identities=14% Similarity=0.111 Sum_probs=75.6
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLN 87 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~ 87 (113)
+++..+..|+||+|+++..++-..+..+...+...+..+..+.+++++|+..++.+++++|++.|++++.++..|.||||
T Consensus 6 ~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 85 (437)
T 1n11_A 6 SGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLH 85 (437)
T ss_dssp ---------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSCCHHH
T ss_pred CccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHH
Confidence 45667888999999988777766666666555555555555555666666666667999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 88 WASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 88 ~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+|+..|+.+++++|+++|++++..+
T Consensus 86 ~A~~~g~~~~v~~Ll~~ga~~~~~~ 110 (437)
T 1n11_A 86 CAARIGHTNMVKLLLENNANPNLAT 110 (437)
T ss_dssp HHHHHTCHHHHHHHHHHTCCTTCCC
T ss_pred HHHHCCCHHHHHHHHhCCCCCCCCC
Confidence 9999999999999999999888654
No 62
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.74 E-value=4.6e-18 Score=106.32 Aligned_cols=62 Identities=21% Similarity=0.253 Sum_probs=54.0
Q ss_pred HHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 51 QLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 51 ~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+++++|+..+..+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|
T Consensus 201 t~L~~A~~~g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d 262 (299)
T 1s70_B 201 TALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVN 262 (299)
T ss_dssp CHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CHHHHHHHCCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCcC
Confidence 44555555555579999999999999999999999999999999999999999999999876
No 63
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.73 E-value=6e-18 Score=101.90 Aligned_cols=103 Identities=17% Similarity=0.271 Sum_probs=65.2
Q ss_pred hccccCCCchhHHHHHhhccCcccccccccc-chhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHH
Q psy2938 10 QTFDVGRYQPSHCQAALNQEGNIEYKAHTKT-HKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNW 88 (113)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~ 88 (113)
+..+..|+||+|+++..++...+..+...+. .....+..+.++++.|+..+..+++++|++.|++++..|..|.||||+
T Consensus 52 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~ 131 (223)
T 2f8y_A 52 NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHW 131 (223)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHH
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHH
Confidence 3344555555555554443333333332221 333333444455555555555568888888888888888888888888
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 89 ASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 89 A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
|+..++.+++++|+++|++++.+|
T Consensus 132 A~~~~~~~~v~~Ll~~g~~~~~~~ 155 (223)
T 2f8y_A 132 AAAVNNVDAAVVLLKNGANKDMQN 155 (223)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHcCCHHHHHHHHHcCCCCCCcC
Confidence 888888888888888888887664
No 64
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.73 E-value=1.2e-18 Score=107.02 Aligned_cols=97 Identities=10% Similarity=0.015 Sum_probs=74.5
Q ss_pred cccCCCchhHHHHHhhccCccccccccccchhccccc-------------hHHHHHHHHhCCHHHHHHHHHh---CCCCc
Q psy2938 12 FDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSN-------------ILQLIECIRSKDTDALIETIDS---GGVEV 75 (113)
Q Consensus 12 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~L~~---~~~~~ 75 (113)
.|..|+||+|+++..++...+..+...+...+..+.. +.+++++|+..+..+++++|++ .|+++
T Consensus 86 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~ 165 (256)
T 2etb_A 86 EFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASL 165 (256)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCT
T ss_pred ccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCc
Confidence 3467999999987655555555544444444444442 4555555665666679999999 99999
Q ss_pred cccCCCCChHHHHHHH--cCCHH-------HHHHHHHcCCCC
Q psy2938 76 NFMDDVGQTLLNWASA--FGTQE-------MVEFLCERGADV 108 (113)
Q Consensus 76 ~~~d~~g~tpL~~A~~--~~~~~-------~v~~Ll~~g~~~ 108 (113)
+.+|..|+||||+|+. .++.+ ++++|+++|+++
T Consensus 166 n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 166 EATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp TCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCc
Confidence 9999999999999999 88888 999999999988
No 65
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.73 E-value=6.7e-18 Score=102.66 Aligned_cols=105 Identities=19% Similarity=0.127 Sum_probs=78.9
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCC------ccccCCC
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVE------VNFMDDV 81 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~------~~~~d~~ 81 (113)
.++..+..|+||+|+++..++...+..+...+...+..+..+.+++++|+..+..+++++|++.+.+ ++..+..
T Consensus 37 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 116 (236)
T 1ikn_D 37 FLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYN 116 (236)
T ss_dssp CCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTT
T ss_pred HhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCC
Confidence 4566777888888888877766666666666666666665666666666665666788888887765 4667778
Q ss_pred CChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 82 GQTLLNWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 82 g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
|.||||+|+..|+.+++++|+++|++++.++
T Consensus 117 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 147 (236)
T 1ikn_D 117 GHTCLHLASIHGYLGIVELLVSLGADVNAQE 147 (236)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHHTCCTTCCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 8999999999999999999999898888764
No 66
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.73 E-value=6.4e-18 Score=100.35 Aligned_cols=98 Identities=13% Similarity=0.073 Sum_probs=41.9
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHH-hCCCCccccCCCCChHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETID-SGGVEVNFMDDVGQTLL 86 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~-~~~~~~~~~d~~g~tpL 86 (113)
+++..+..|+||+|+++..++...+..+...+...+..+..+.+++++++..+..+++++|+ ..+++++..|..|.|||
T Consensus 31 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L 110 (201)
T 3hra_A 31 QVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNAL 110 (201)
T ss_dssp CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSH
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHH
Confidence 45556677777777765443333333333223222222222223333333333333444443 33334444444444444
Q ss_pred HHHHHcCCHHHHHHHHHcC
Q psy2938 87 NWASAFGTQEMVEFLCERG 105 (113)
Q Consensus 87 ~~A~~~~~~~~v~~Ll~~g 105 (113)
|+|+..|+.+++++|+++|
T Consensus 111 ~~A~~~~~~~~v~~Ll~~g 129 (201)
T 3hra_A 111 IPAAEKGHIDNVKLLLEDG 129 (201)
T ss_dssp HHHHHTTCHHHHHHHHHHC
T ss_pred HHHHHcCCHHHHHHHHHcC
Confidence 4444444444444444444
No 67
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.73 E-value=6.4e-18 Score=100.34 Aligned_cols=105 Identities=19% Similarity=0.176 Sum_probs=80.4
Q ss_pred hhhccccCCCchhHHHHHhhccCcccccc-ccccchhccccchHHHHHHHHhCCHHHHHHHHHhCC-CCccccCCCCChH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKA-HTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGG-VEVNFMDDVGQTL 85 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~d~~g~tp 85 (113)
+++..+..|+||+|+++..++...+..+. ..+......+..+.++++.++..+..+++++|++.| ++++.+|..|.||
T Consensus 64 ~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~ 143 (201)
T 3hra_A 64 DINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTA 143 (201)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCH
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCH
Confidence 45667788999999988766655555554 344444445555556666666666667889898887 8999999999999
Q ss_pred HHHHHHcCC-----HHHHHHHHHcCCCCCCCC
Q psy2938 86 LNWASAFGT-----QEMVEFLCERGADVNKGK 112 (113)
Q Consensus 86 L~~A~~~~~-----~~~v~~Ll~~g~~~~~~d 112 (113)
||+|+..+. .+++++|+++|++++.+|
T Consensus 144 L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~ 175 (201)
T 3hra_A 144 LIEAVGLREGNQLYQDIVKLLMENGADQSIKD 175 (201)
T ss_dssp HHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCC
T ss_pred HHHHHHhccchhhHHHHHHHHHHCCCCCCccC
Confidence 999999887 899999999999998775
No 68
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.73 E-value=1.3e-17 Score=106.05 Aligned_cols=71 Identities=23% Similarity=0.298 Sum_probs=54.9
Q ss_pred hhccccchHHHHHHHHhCCHHHHHHHHHh-CCCCccccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 42 KTFKTSNILQLIECIRSKDTDALIETIDS-GGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~~-~~~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
.+.++..+.++++.++..+..+++++|+. .|++++.+|..|+||||+|+..|+.++|++|+++|+++|.+|
T Consensus 232 ~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~~ 303 (337)
T 4g8k_A 232 VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 303 (337)
T ss_dssp TTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTCC
T ss_pred CCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCC
Confidence 33344455555555555555567777775 589999999999999999999999999999999999998765
No 69
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.73 E-value=1.3e-18 Score=107.07 Aligned_cols=99 Identities=10% Similarity=0.057 Sum_probs=76.0
Q ss_pred hccccCCCchhHHHHHhhccCccccccccccchhccc--------------cchHHHHHHHHhCCHHHHHHHHHh---CC
Q psy2938 10 QTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKT--------------SNILQLIECIRSKDTDALIETIDS---GG 72 (113)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~L~~---~~ 72 (113)
...|..|+||+|+++..++...+..+...+...+..+ ..+.+++++|+..+..+++++|++ .|
T Consensus 87 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~g 166 (260)
T 3jxi_A 87 RDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQ 166 (260)
T ss_dssp CCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCC
T ss_pred cccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccC
Confidence 3445589999999877666555555555555555444 345555666666666679999999 89
Q ss_pred CCccccCCCCChHHHHHHHcCC---------HHHHHHHHHcCCCC
Q psy2938 73 VEVNFMDDVGQTLLNWASAFGT---------QEMVEFLCERGADV 108 (113)
Q Consensus 73 ~~~~~~d~~g~tpL~~A~~~~~---------~~~v~~Ll~~g~~~ 108 (113)
++++.+|..|+||||+|+..++ .+++++|+++|+++
T Consensus 167 a~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~ 211 (260)
T 3jxi_A 167 ADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKL 211 (260)
T ss_dssp CCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCccc
Confidence 9999999999999999998877 79999999999987
No 70
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.72 E-value=7.4e-18 Score=107.02 Aligned_cols=101 Identities=18% Similarity=0.240 Sum_probs=77.7
Q ss_pred cccCCCchhHHHHHhhcc---CccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHH
Q psy2938 12 FDVGRYQPSHCQAALNQE---GNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNW 88 (113)
Q Consensus 12 ~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~ 88 (113)
.+..+.||+|+++..++. ..+..+...+...+.++..+.++++.|+..+..+++++|++.|++++.+|..|+||||+
T Consensus 207 ~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~ 286 (351)
T 3utm_A 207 QPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHR 286 (351)
T ss_dssp CTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 456788999988754322 22223334444444445555666666666666689999999999999999999999999
Q ss_pred HHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 89 ASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 89 A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
|+..|+.+++++|+++|++++.+|
T Consensus 287 A~~~~~~~~v~~Ll~~gad~~~~~ 310 (351)
T 3utm_A 287 AALAGHLQTCRLLLSYGSDPSIIS 310 (351)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHcCcHHHHHHHHHcCCCCCCcC
Confidence 999999999999999999999876
No 71
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.72 E-value=5.4e-18 Score=106.02 Aligned_cols=101 Identities=14% Similarity=0.154 Sum_probs=79.5
Q ss_pred cccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHHHH
Q psy2938 12 FDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASA 91 (113)
Q Consensus 12 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~~ 91 (113)
.+..+.+|++.++..++-..+..+...+...+..+..+.+++++|+..+..+++++|++.|++++..|..|.||||+|+.
T Consensus 36 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~ 115 (299)
T 1s70_B 36 VKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAAS 115 (299)
T ss_dssp CEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred cccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH
Confidence 34566788888876665555555554455555455556666666766667789999999999999999999999999999
Q ss_pred cCCHHHHHHHHHcCCCCCCCC
Q psy2938 92 FGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 92 ~~~~~~v~~Ll~~g~~~~~~d 112 (113)
.|+.+++++|+++|++++..|
T Consensus 116 ~g~~~~v~~Ll~~g~~~~~~~ 136 (299)
T 1s70_B 116 CGYLDIAEYLISQGAHVGAVN 136 (299)
T ss_dssp HTCHHHHHHHHHTTCCTTCCC
T ss_pred cCCHHHHHHHHhCCCCCCCcC
Confidence 999999999999999998765
No 72
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.72 E-value=5.5e-18 Score=105.61 Aligned_cols=99 Identities=19% Similarity=0.148 Sum_probs=60.9
Q ss_pred cCCCchhHHHHHhhccCccccccccccc--hhccccchHHHHHHHHhCCHHHHHHHHHhCCC-Cccc-------------
Q psy2938 14 VGRYQPSHCQAALNQEGNIEYKAHTKTH--KTFKTSNILQLIECIRSKDTDALIETIDSGGV-EVNF------------- 77 (113)
Q Consensus 14 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~-~~~~------------- 77 (113)
....+++|.+...++-..+......... .+..+..+.+++++|+..+..+++++|++.|+ +++.
T Consensus 74 ~~~~~~l~~a~~~~~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~ 153 (276)
T 4hbd_A 74 LACRSDAHPELVRRHLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTA 153 (276)
T ss_dssp HHHSTTCCHHHHHHHHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHGG
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCCCCHHHHHH
Confidence 3345555555544433333222211111 22234444455555555555567777777765 4444
Q ss_pred -------------------------cCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 78 -------------------------MDDVGQTLLNWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 78 -------------------------~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
.+..|+||||+|+..|+.+++++|+++|++++.+|
T Consensus 154 ~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d 213 (276)
T 4hbd_A 154 LATLKTQDDIETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQD 213 (276)
T ss_dssp GCCCCSHHHHHHHHHHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHhhhhhhHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC
Confidence 34458899999999999999999999999999876
No 73
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.72 E-value=1.1e-17 Score=103.66 Aligned_cols=65 Identities=17% Similarity=0.237 Sum_probs=53.2
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhCCCCccccCC-CCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 48 NILQLIECIRSKDTDALIETIDSGGVEVNFMDD-VGQTLLNWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~-~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
.+.+++++|+..+..+++++|++.|++++..+. .|+||||+|+..|+.+++++|+++|++++.+|
T Consensus 157 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d 222 (282)
T 1oy3_D 157 DGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARM 222 (282)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccc
Confidence 444556666666666789999999999998874 59999999999999999999999999998876
No 74
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.72 E-value=1.5e-18 Score=101.74 Aligned_cols=105 Identities=15% Similarity=0.102 Sum_probs=87.1
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLN 87 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~ 87 (113)
+++..+..|.||+|+++..++...+..+...+...+..+..+.+++++|+..+..+++++|++.|++++.+|..|.|||+
T Consensus 64 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~ 143 (179)
T 3f6q_A 64 RINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVD 143 (179)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGG
T ss_pred CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHH
Confidence 45667889999999988766666666666666666666666667777777777778999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 88 WASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 88 ~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+|+..++.+++++|+++|++++..+
T Consensus 144 ~A~~~~~~~~~~~L~~~g~~~~~~~ 168 (179)
T 3f6q_A 144 KAKAPLRELLRERAEKMGQNLNRIP 168 (179)
T ss_dssp GSCHHHHHHHHHHHHHTTCCCSCBC
T ss_pred HHHHHHHHHHHHHHHHhhcCcccCC
Confidence 9999999999999999999988643
No 75
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.71 E-value=1.1e-17 Score=97.28 Aligned_cols=98 Identities=14% Similarity=0.162 Sum_probs=79.4
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLN 87 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~ 87 (113)
+++..+..|.||+|+++..++...+..+...+...+..+..+.+++++|+..+..+++++|++.|++++.+|..|.|||+
T Consensus 72 ~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~ 151 (169)
T 2y1l_E 72 DVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFD 151 (169)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 45667888999999988766666666655555555555666666777777777778999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHcC
Q psy2938 88 WASAFGTQEMVEFLCERG 105 (113)
Q Consensus 88 ~A~~~~~~~~v~~Ll~~g 105 (113)
+|+..++.+++++|++.|
T Consensus 152 ~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 152 ISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp HHHHTTCHHHHHHHHTC-
T ss_pred HHHHhCCHHHHHHHHHcC
Confidence 999999999999999876
No 76
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.71 E-value=1.1e-17 Score=103.27 Aligned_cols=61 Identities=16% Similarity=0.196 Sum_probs=29.0
Q ss_pred HHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 51 QLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 51 ~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+++++|+..+..+++++|++.|++++. +..|.||||+|+..++.+++++|+++|++++.+|
T Consensus 136 t~L~~A~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d 196 (261)
T 2xai_A 136 TPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKN 196 (261)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred CHHHHHHHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 333333333333445555555555542 4445555555555555555555555555554443
No 77
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.71 E-value=1.1e-17 Score=96.79 Aligned_cols=101 Identities=16% Similarity=0.117 Sum_probs=77.5
Q ss_pred cccCCCchhHHHHHhhccCccccccc-cccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHHH
Q psy2938 12 FDVGRYQPSHCQAALNQEGNIEYKAH-TKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWAS 90 (113)
Q Consensus 12 ~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~ 90 (113)
.+..+.+|++.++..++...+..+.. .+......+..+.+++++|+..+..+++++|++.|++++.+|..|+||||+|+
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 83 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNAC 83 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence 35567888988887776666655543 23333333444446666666666678999999999999999999999999999
Q ss_pred HcCCHHHHHHHHHcCCCCCCCC
Q psy2938 91 AFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 91 ~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
..++.+++++|+++|++++.+|
T Consensus 84 ~~~~~~~v~~Ll~~g~~~~~~~ 105 (165)
T 3twr_A 84 SYGHYEVAELLVKHGAVVNVAD 105 (165)
T ss_dssp HTTCHHHHHHHHHTTCCTTCCC
T ss_pred HcCcHHHHHHHHhCCCCCCCcC
Confidence 9999999999999999998775
No 78
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.71 E-value=1.7e-17 Score=100.73 Aligned_cols=99 Identities=21% Similarity=0.293 Sum_probs=45.7
Q ss_pred ccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCC-CCccccCCCCChHHHHHHH
Q psy2938 13 DVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGG-VEVNFMDDVGQTLLNWASA 91 (113)
Q Consensus 13 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~~~~d~~g~tpL~~A~~ 91 (113)
+..|.||+|+++..++...+..+...+......+..+.++++.++..+..+++++|++.+ .+++..+..|.||||+|+.
T Consensus 41 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~ 120 (237)
T 3b7b_A 41 SEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATE 120 (237)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHH
T ss_pred CCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHH
Confidence 334444444444333333333333333333333333334444444444444555555544 4555555555555555555
Q ss_pred cCCHHHHHHHHHcCCCCCCC
Q psy2938 92 FGTQEMVEFLCERGADVNKG 111 (113)
Q Consensus 92 ~~~~~~v~~Ll~~g~~~~~~ 111 (113)
.++.+++++|++.|++++.+
T Consensus 121 ~~~~~~~~~Ll~~g~~~~~~ 140 (237)
T 3b7b_A 121 YKHVDLVKLLLSKGSDINIR 140 (237)
T ss_dssp TTCHHHHHHHHHTTCCTTCC
T ss_pred cCCHHHHHHHHHCCCCCCcc
Confidence 55555555555555555443
No 79
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.71 E-value=1.5e-17 Score=103.10 Aligned_cols=101 Identities=13% Similarity=0.075 Sum_probs=77.6
Q ss_pred cccCCCchhHHHHHh---hccCccccccccccc-------hhc----cccchHHHHHHHHhCCHHHHHHHHHhCCCCccc
Q psy2938 12 FDVGRYQPSHCQAAL---NQEGNIEYKAHTKTH-------KTF----KTSNILQLIECIRSKDTDALIETIDSGGVEVNF 77 (113)
Q Consensus 12 ~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~-------~~~----~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~ 77 (113)
.+..|+||+|+++.. ++...+..+...+.. ++. .+..+.+++++|+..+..+++++|++.|++++.
T Consensus 50 ~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~ 129 (273)
T 2pnn_A 50 DPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQA 129 (273)
T ss_dssp CTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred cCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCc
Confidence 477999999999965 555555555433321 111 233455666666666667899999999999999
Q ss_pred cCC--------------CCChHHHHHHHcCCHHHHHHHHH---cCCCCCCCC
Q psy2938 78 MDD--------------VGQTLLNWASAFGTQEMVEFLCE---RGADVNKGK 112 (113)
Q Consensus 78 ~d~--------------~g~tpL~~A~~~~~~~~v~~Ll~---~g~~~~~~d 112 (113)
.+. .|.||||+|+..|+.+++++|++ +|++++.+|
T Consensus 130 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d 181 (273)
T 2pnn_A 130 AANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARD 181 (273)
T ss_dssp CBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCC
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeC
Confidence 987 79999999999999999999999 999999876
No 80
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.71 E-value=8.5e-18 Score=106.94 Aligned_cols=39 Identities=33% Similarity=0.393 Sum_probs=36.5
Q ss_pred CccccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 74 EVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 74 ~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+++.+|..|+||||+|+..|+.+++++|+++|++++.+|
T Consensus 275 ~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d 313 (327)
T 1sw6_A 275 MLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIAN 313 (327)
T ss_dssp TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCC
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccC
Confidence 578889999999999999999999999999999999876
No 81
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.71 E-value=1.9e-17 Score=101.87 Aligned_cols=99 Identities=12% Similarity=0.064 Sum_probs=73.7
Q ss_pred cCCCchhHHHHH---hhccCcccccccccc-----------chhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccC
Q psy2938 14 VGRYQPSHCQAA---LNQEGNIEYKAHTKT-----------HKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMD 79 (113)
Q Consensus 14 ~~~~~~~~~~~l---~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d 79 (113)
..|+||+|++++ .++...+..+...+. .....+..+.+++++|+..+..+++++|++.|++++..+
T Consensus 44 ~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~ 123 (260)
T 3jxi_A 44 STGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQA 123 (260)
T ss_dssp TTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccc
Confidence 569999999883 244444444443221 111122244555666666666679999999999999998
Q ss_pred --------------CCCChHHHHHHHcCCHHHHHHHHH---cCCCCCCCC
Q psy2938 80 --------------DVGQTLLNWASAFGTQEMVEFLCE---RGADVNKGK 112 (113)
Q Consensus 80 --------------~~g~tpL~~A~~~~~~~~v~~Ll~---~g~~~~~~d 112 (113)
..|.||||+|+..|+.+++++|++ +|++++.+|
T Consensus 124 ~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d 173 (260)
T 3jxi_A 124 RGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQD 173 (260)
T ss_dssp EECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCC
T ss_pred cccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccC
Confidence 689999999999999999999999 999999876
No 82
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.71 E-value=1.5e-17 Score=100.71 Aligned_cols=100 Identities=7% Similarity=0.035 Sum_probs=73.6
Q ss_pred hccccCCCchhHHHHHhhccCccccccccccchhcccc-------------chHHHHHHHHhCCHHHHHHHHHhCCCCcc
Q psy2938 10 QTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTS-------------NILQLIECIRSKDTDALIETIDSGGVEVN 76 (113)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~L~~~~~~~~ 76 (113)
...|..|+||+|+++..++...+..+...+......+. .+.+++++|+..+..+++++|++.|++++
T Consensus 69 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~ 148 (232)
T 2rfa_A 69 TSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIR 148 (232)
T ss_dssp CSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred cccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence 34566899999998765554444444433333333322 34455555555555679999999999999
Q ss_pred ccCCCCChHHHHHHHcCCHHHH----HHHHHcCCCCC
Q psy2938 77 FMDDVGQTLLNWASAFGTQEMV----EFLCERGADVN 109 (113)
Q Consensus 77 ~~d~~g~tpL~~A~~~~~~~~v----~~Ll~~g~~~~ 109 (113)
.+|..|+||||+|+..++.+++ ++|+++|++++
T Consensus 149 ~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~ 185 (232)
T 2rfa_A 149 AQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDH 185 (232)
T ss_dssp CCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCS
T ss_pred CCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchh
Confidence 9999999999999999999988 99999999874
No 83
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.70 E-value=3.1e-17 Score=86.80 Aligned_cols=61 Identities=30% Similarity=0.379 Sum_probs=53.2
Q ss_pred HHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 52 LIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 52 ~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+++.++..+..+++++|++.|++++.+|..|+||||+|+..++.+++++|+++|++++.+|
T Consensus 5 ~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d 65 (93)
T 1n0q_A 5 PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD 65 (93)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccC
Confidence 4444444445579999999999999999999999999999999999999999999998876
No 84
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.70 E-value=1.8e-17 Score=105.46 Aligned_cols=99 Identities=11% Similarity=0.005 Sum_probs=74.9
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccc-cccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAH-TKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLL 86 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL 86 (113)
+++..+..|+||+|+++..++...+..+.. .+..++.++..+.+++++|+..++.+++++|++.|+++|.+ +||
T Consensus 231 d~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~-----~~L 305 (337)
T 4g8k_A 231 DVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG-----DLV 305 (337)
T ss_dssp CTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTC-----CHH
T ss_pred CCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCC-----CHH
Confidence 345667788888888776555544444442 35556666666777777777777778999999999999864 599
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCC
Q psy2938 87 NWASAFGTQEMVEFLCERGADVNKG 111 (113)
Q Consensus 87 ~~A~~~~~~~~v~~Ll~~g~~~~~~ 111 (113)
|+|+..|+.++|++|+++||++|..
T Consensus 306 ~~A~~~~~~~iv~~Ll~~GA~~d~~ 330 (337)
T 4g8k_A 306 MTARRNYDHSLVKVLLSHGAKEDFH 330 (337)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCC---
T ss_pred HHHHHcCCHHHHHHHHHCcCCCCCC
Confidence 9999999999999999999999863
No 85
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.70 E-value=5.4e-18 Score=105.08 Aligned_cols=99 Identities=10% Similarity=0.012 Sum_probs=75.8
Q ss_pred cccCCCchhHHHHHhhccCccccccccccchhcccc--------------chHHHHHHHHhCCHHHHHHHHHh---CCCC
Q psy2938 12 FDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTS--------------NILQLIECIRSKDTDALIETIDS---GGVE 74 (113)
Q Consensus 12 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~L~~---~~~~ 74 (113)
.|..|+||+|+++..++...+..+...+...+..+. .+.+++++|+..+..+++++|++ .|++
T Consensus 97 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad 176 (273)
T 2pnn_A 97 SYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD 176 (273)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC
Confidence 456899999998765555555555444444444443 34455555555566679999999 9999
Q ss_pred ccccCCCCChHHHHHHHcCC---------HHHHHHHHHcCCCCCC
Q psy2938 75 VNFMDDVGQTLLNWASAFGT---------QEMVEFLCERGADVNK 110 (113)
Q Consensus 75 ~~~~d~~g~tpL~~A~~~~~---------~~~v~~Ll~~g~~~~~ 110 (113)
++.+|..|+||||+|+..++ .+++++|+++|++++.
T Consensus 177 ~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~ 221 (273)
T 2pnn_A 177 ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHP 221 (273)
T ss_dssp TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhccc
Confidence 99999999999999999988 8999999999998863
No 86
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.70 E-value=1e-17 Score=91.38 Aligned_cols=92 Identities=13% Similarity=0.133 Sum_probs=48.8
Q ss_pred hccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHH
Q psy2938 10 QTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWA 89 (113)
Q Consensus 10 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A 89 (113)
...+..|.+|+|+++..++...+..+...+...+.++..+.+++++|+..+..+++++|++.|++++.+|..|+||||+|
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A 97 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS 97 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHH
Confidence 34555666666665544444333333333333333344444444444444445566666666666666666666666666
Q ss_pred HHcCCHHHHHHH
Q psy2938 90 SAFGTQEMVEFL 101 (113)
Q Consensus 90 ~~~~~~~~v~~L 101 (113)
+..|+.+++++|
T Consensus 98 ~~~~~~~~~~~L 109 (110)
T 2zgd_A 98 IDNGNEDLAEIL 109 (110)
T ss_dssp HHHTCHHHHHHH
T ss_pred HHcCCHHHHHHh
Confidence 666666666655
No 87
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.70 E-value=4.1e-17 Score=102.01 Aligned_cols=67 Identities=18% Similarity=0.190 Sum_probs=38.8
Q ss_pred cccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 45 KTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
.+..+.++++.|+..+..+++++|++.|++++. +..|.||||+|+..++.+++++|+++|++++.+|
T Consensus 186 ~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d 252 (285)
T 3d9h_A 186 KISHLGTPLYLACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAKN 252 (285)
T ss_dssp CBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC
Confidence 333344444444444444566666666666663 5566666666666666666666666666666554
No 88
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.70 E-value=9.4e-18 Score=107.67 Aligned_cols=101 Identities=9% Similarity=0.024 Sum_probs=84.1
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccc-----hhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCC
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTH-----KTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVG 82 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g 82 (113)
+++..|..|.||+|+++..++...+..+...+.. .+..+..+.+++++|+..++.+++++|++.|++++.+|..|
T Consensus 165 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g 244 (364)
T 3ljn_A 165 SPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEH 244 (364)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTS
T ss_pred CCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Confidence 4567788999999998877766666666554444 55566667777778888888889999999999999999999
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCC
Q psy2938 83 QTLLNWASAFGTQEMVEFLCERGADV 108 (113)
Q Consensus 83 ~tpL~~A~~~~~~~~v~~Ll~~g~~~ 108 (113)
.||||+|+..|+.+++++|+++|+++
T Consensus 245 ~tpL~~A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 245 TVPLYLSVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp CCHHHHHHHTCCHHHHHHHHHHSCHH
T ss_pred CCHHHHHHHhChHHHHHHHHHcCCch
Confidence 99999999999999999999998764
No 89
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.69 E-value=3.6e-17 Score=93.66 Aligned_cols=94 Identities=13% Similarity=0.139 Sum_probs=78.8
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLN 87 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~ 87 (113)
+++..+..|+||+|+++..++...+..+...+...+.++..+.+++++|+..+..+++++|++.|++++.+|..|.||||
T Consensus 59 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 138 (153)
T 1awc_B 59 SRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFD 138 (153)
T ss_dssp CTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCCCCCCCCCHHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHH
Confidence 45667888999999988777666666666666666666666777777777777778999999999999999999999999
Q ss_pred HHHHcCCHHHHHHH
Q psy2938 88 WASAFGTQEMVEFL 101 (113)
Q Consensus 88 ~A~~~~~~~~v~~L 101 (113)
+|+..|+.+++++|
T Consensus 139 ~A~~~~~~~i~~~L 152 (153)
T 1awc_B 139 ISIDNGNEDLAEIL 152 (153)
T ss_dssp HHHHTTCHHHHHHH
T ss_pred HHHHcCCHHHHHHh
Confidence 99999999999987
No 90
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.69 E-value=1.5e-17 Score=107.36 Aligned_cols=105 Identities=14% Similarity=0.138 Sum_probs=72.8
Q ss_pred hhhccccCCCchhHHHHHhh---ccCccccccccccchhc--------cccchHHHHHHHHhCCHHHHHHHHHhCC-CCc
Q psy2938 8 AIQTFDVGRYQPSHCQAALN---QEGNIEYKAHTKTHKTF--------KTSNILQLIECIRSKDTDALIETIDSGG-VEV 75 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~~ 75 (113)
+++..+..|+||+|+++..+ +...+..+...+...+. .+..+.+++++|+..+..+++++|++.+ +++
T Consensus 227 ~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~ 306 (373)
T 2fo1_E 227 DIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNK 306 (373)
T ss_dssp TTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCT
T ss_pred ChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCc
Confidence 55667788888888766433 21222222222222211 2334555666666666677888888654 999
Q ss_pred cccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 76 NFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 76 ~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+.+|..|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 307 n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d 343 (373)
T 2fo1_E 307 DKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVD 343 (373)
T ss_dssp TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCC
T ss_pred cCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCC
Confidence 9999999999999999999999999999999998776
No 91
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.69 E-value=2.4e-17 Score=94.47 Aligned_cols=96 Identities=16% Similarity=0.129 Sum_probs=76.4
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLN 87 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~ 87 (113)
+++..|..|.||+|+++..++...+..+...+...+.++..+.+++++|+..+..+++++|++. ++++.+|..|.||||
T Consensus 60 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~ 138 (156)
T 1bd8_A 60 SPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLE 138 (156)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHH
T ss_pred CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHH
Confidence 4567788999999998876665555555555555555555566666666666667899999998 999999999999999
Q ss_pred HHHHcCCHHHHHHHHHc
Q psy2938 88 WASAFGTQEMVEFLCER 104 (113)
Q Consensus 88 ~A~~~~~~~~v~~Ll~~ 104 (113)
+|+..|+.+++++|+++
T Consensus 139 ~A~~~~~~~~v~~Ll~~ 155 (156)
T 1bd8_A 139 LALQRGAQDLVDILQGH 155 (156)
T ss_dssp HHHHSCCHHHHHHHHTT
T ss_pred HHHHcCcHHHHHHHHhh
Confidence 99999999999999864
No 92
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.69 E-value=2.3e-17 Score=103.19 Aligned_cols=65 Identities=11% Similarity=0.009 Sum_probs=54.7
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChH-HHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 48 NILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTL-LNWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tp-L~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
.+.++++.|+..+..+++++|++.|++++.+|..|+|| ||+|+..++.+++++|+++|++++.+|
T Consensus 160 ~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~ 225 (285)
T 3kea_A 160 ILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSAN 225 (285)
T ss_dssp THHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTT
T ss_pred CCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Confidence 45666666666666778999998899999999899887 999999999999999999999988765
No 93
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.68 E-value=1.2e-17 Score=105.38 Aligned_cols=95 Identities=14% Similarity=0.105 Sum_probs=53.9
Q ss_pred ccCCCchhHHHHHh---hccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHH
Q psy2938 13 DVGRYQPSHCQAAL---NQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWA 89 (113)
Q Consensus 13 ~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A 89 (113)
+..|.||+|+++.. ++...+.++...+..++.++..+.+++++|+..+..+++++|++.|++++.+|..|.||||+|
T Consensus 187 ~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A 266 (301)
T 2b0o_E 187 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIA 266 (301)
T ss_dssp CSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHH
T ss_pred CCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 55666666666643 222222333333333333344444445555545555566666666777776666677777777
Q ss_pred HHcCCHHHHHHHHHcCCC
Q psy2938 90 SAFGTQEMVEFLCERGAD 107 (113)
Q Consensus 90 ~~~~~~~~v~~Ll~~g~~ 107 (113)
+..++.+++++|+++|++
T Consensus 267 ~~~~~~~iv~~Ll~~ga~ 284 (301)
T 2b0o_E 267 RKKHHKECEELLEQAQAG 284 (301)
T ss_dssp HHHTCHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHhcCC
Confidence 777777777777666654
No 94
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.68 E-value=2.7e-18 Score=101.72 Aligned_cols=106 Identities=11% Similarity=-0.031 Sum_probs=74.5
Q ss_pred hhhhccccCCCchhHHHHHhhcc------CccccccccccchhccccchH-HHHHHHHhC-----CHHHHHHHHHh-CCC
Q psy2938 7 KAIQTFDVGRYQPSHCQAALNQE------GNIEYKAHTKTHKTFKTSNIL-QLIECIRSK-----DTDALIETIDS-GGV 73 (113)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~L~~-~~~ 73 (113)
.+++..|..|+||+|+++..++. ..+..+...|.+++.++..+. ++++++... +...++++|++ .|+
T Consensus 66 advn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~ga 145 (186)
T 3t8k_A 66 ADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGL 145 (186)
T ss_dssp CCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTC
T ss_pred CCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCC
Confidence 35667889999999976533321 112222233334444444454 666666653 34568999999 999
Q ss_pred CccccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 74 EVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 74 ~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+++.+|..|+||||+|+..|+.+++++|.+.....+.++
T Consensus 146 d~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~~~~~~ 184 (186)
T 3t8k_A 146 QLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLKE 184 (186)
T ss_dssp CTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHHHTCCC
T ss_pred CCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999998765555544
No 95
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.68 E-value=6.9e-17 Score=99.89 Aligned_cols=99 Identities=23% Similarity=0.294 Sum_probs=79.8
Q ss_pred ccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHc
Q psy2938 13 DVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAF 92 (113)
Q Consensus 13 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~~~ 92 (113)
+..|+||+|+++..++...+..+...+......+..+.+++++|+..+..+++++|++.|++++..|..|.||||+|+..
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~ 115 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVY 115 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHT
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHh
Confidence 66789999998876666666666655555555555566666666666666799999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCCCC
Q psy2938 93 GTQEMVEFLCERGADVNKG 111 (113)
Q Consensus 93 ~~~~~v~~Ll~~g~~~~~~ 111 (113)
|+.+++++|+++|++++..
T Consensus 116 ~~~~~~~~Ll~~g~~~~~~ 134 (285)
T 1wdy_A 116 GKVKALKFLYKRGANVNLR 134 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCC
T ss_pred CCHHHHHHHHHhCCCcccc
Confidence 9999999999999988765
No 96
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.68 E-value=6.1e-17 Score=98.34 Aligned_cols=65 Identities=20% Similarity=0.318 Sum_probs=40.2
Q ss_pred chHHHHHHHHhCCHHHHHHHHHhCCCCccccC-CCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 48 NILQLIECIRSKDTDALIETIDSGGVEVNFMD-DVGQTLLNWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d-~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
.+.++++.++..+..+++++|++.|++++..+ ..|.||||+|+..|+.+++++|+++|++++.+|
T Consensus 115 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 180 (241)
T 1k1a_A 115 DGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQM 180 (241)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBC
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 33344444444444456666666666666666 566777777777777777777777776666544
No 97
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.68 E-value=5.5e-17 Score=104.76 Aligned_cols=105 Identities=10% Similarity=0.060 Sum_probs=66.4
Q ss_pred hhhccc-cCCCchhHHHHHhhccCcccccc--------ccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCcccc
Q psy2938 8 AIQTFD-VGRYQPSHCQAALNQEGNIEYKA--------HTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFM 78 (113)
Q Consensus 8 ~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~ 78 (113)
.++..| ..|.||+|+++..++...+..+. ..+...+..+..+.+++++|+..+..+++++|++.|++++..
T Consensus 116 ~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~ 195 (373)
T 2fo1_E 116 SVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIY 195 (373)
T ss_dssp TTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCC
T ss_pred cccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCCCccc
Confidence 445555 56777777777665555555443 334444545555555555555555556777777777777777
Q ss_pred CCCCChHHHHHHHcCCHHHHHHHHHcC---CCCCCCC
Q psy2938 79 DDVGQTLLNWASAFGTQEMVEFLCERG---ADVNKGK 112 (113)
Q Consensus 79 d~~g~tpL~~A~~~~~~~~v~~Ll~~g---~~~~~~d 112 (113)
|..|.||||+|+..|+.+++++|+++| ++++..|
T Consensus 196 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d 232 (373)
T 2fo1_E 196 NKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELD 232 (373)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCC
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcC
Confidence 777777777777777777777777666 5555443
No 98
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.67 E-value=3e-17 Score=106.13 Aligned_cols=64 Identities=20% Similarity=0.251 Sum_probs=48.9
Q ss_pred hHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 49 ILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+.+++++|+..+..+++++|++.|++++..|..|+||||+|+..|+.+++++|+++|++++.+|
T Consensus 235 g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d 298 (368)
T 3jue_A 235 NATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARD 298 (368)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcC
Confidence 3444555555555568888888888888888888888888888888888888888888887765
No 99
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.67 E-value=6.7e-17 Score=101.97 Aligned_cols=65 Identities=15% Similarity=0.163 Sum_probs=55.8
Q ss_pred chHHHHHHHHhC---CHHHHHHHHHhCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 48 NILQLIECIRSK---DTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 48 ~~~~~~~~~~~~---~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
.+.+++++|+.. +..+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|
T Consensus 189 ~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d 256 (301)
T 2b0o_E 189 PEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVN 256 (301)
T ss_dssp CEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCC
T ss_pred CCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcC
Confidence 344444455443 66789999999999999999999999999999999999999999999999876
No 100
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.67 E-value=5.2e-17 Score=108.39 Aligned_cols=85 Identities=13% Similarity=0.125 Sum_probs=65.0
Q ss_pred HHhhccCccccccccccchhccccchHHHHHHHH---hCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHcCCHHHHHH
Q psy2938 24 AALNQEGNIEYKAHTKTHKTFKTSNILQLIECIR---SKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEF 100 (113)
Q Consensus 24 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~~~~~~~~v~~ 100 (113)
.++.+|++++..... ...+..+.+++++|+ ..+..+++++|++.|+++|.+|..|+||||+|+..|+.+++++
T Consensus 150 ~ll~~g~~~n~~~~~----~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~vn~~d~~g~TpLh~A~~~g~~~~v~~ 225 (497)
T 3lvq_E 150 EAFANGQDFGQPLPG----PDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKL 225 (497)
T ss_dssp HHHHTTCCSSSCBCC----SSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCTTCCCSSSCCHHHHHTTTTCHHHHHH
T ss_pred HHHhhcccccCCCCC----cccccccchHHHHHHHhcccccHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHH
Confidence 345566666554210 001334445555553 3667789999999999999999999999999999999999999
Q ss_pred HHHcCCCCCCCC
Q psy2938 101 LCERGADVNKGK 112 (113)
Q Consensus 101 Ll~~g~~~~~~d 112 (113)
|+++|++++.+|
T Consensus 226 Ll~~ga~~~~~d 237 (497)
T 3lvq_E 226 LLKGRALVGTVN 237 (497)
T ss_dssp HHHTCCCCSCCC
T ss_pred HHHcCCCCCCcC
Confidence 999999999876
No 101
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.66 E-value=3.7e-17 Score=102.13 Aligned_cols=65 Identities=14% Similarity=0.182 Sum_probs=56.3
Q ss_pred chHHHHHHHHhC--CHHHHHHHHHhCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 48 NILQLIECIRSK--DTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 48 ~~~~~~~~~~~~--~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+.++++.++..+ +..+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|
T Consensus 169 g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d 235 (278)
T 1dcq_A 169 DETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIAN 235 (278)
T ss_dssp TCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcc
Confidence 444555555552 66789999999999999999999999999999999999999999999999876
No 102
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.66 E-value=5.7e-18 Score=102.24 Aligned_cols=105 Identities=6% Similarity=-0.025 Sum_probs=76.7
Q ss_pred hhhccccCCCchhHHHHHhhccCcccccccc-ccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHT-KTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLL 86 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL 86 (113)
+++..|..|+||+|+++..++...+..+... +...+.++..+.+++++|+..+..+++++|++.|++++.+|..|.|||
T Consensus 98 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l 177 (222)
T 3ehr_A 98 GVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAF 177 (222)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHH
T ss_pred CccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHH
Confidence 4566788999999999887776667666655 666666666666677777666667899999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 87 NWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 87 ~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
|+|+..++.++++.|++.|++.+.++
T Consensus 178 ~~A~~~~~~~~l~~l~~~~~~~~~~~ 203 (222)
T 3ehr_A 178 DMATNAACASLLKKKQGTDAVRTLSN 203 (222)
T ss_dssp HHCCSHHHHHHHC-------------
T ss_pred HHhcchhHHHHHHHHhccchhhhccc
Confidence 99999999999999999998776543
No 103
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.65 E-value=2.8e-16 Score=95.08 Aligned_cols=105 Identities=15% Similarity=0.187 Sum_probs=77.0
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhcc-ccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFK-TSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLL 86 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL 86 (113)
+++..+..|.||+|+++..++-..+..+...+...... ...+.++++.|+..+..+++++|++.|++++..+..|.|||
T Consensus 34 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l 113 (240)
T 3eu9_A 34 DVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCI 113 (240)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHH
Confidence 45567788899999888766655555555444333322 22233445555545555688999999999999999999999
Q ss_pred HHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 87 NWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 87 ~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
|+|+..++.+++++|+++|++++.++
T Consensus 114 ~~A~~~~~~~~~~~Ll~~~~~~~~~~ 139 (240)
T 3eu9_A 114 HLAAQFGHTSIVAYLIAKGQDVDMMD 139 (240)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred HHHHHcCHHHHHHHHHhcCCCccccC
Confidence 99999999999999999999888764
No 104
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.65 E-value=9.5e-16 Score=83.47 Aligned_cols=66 Identities=27% Similarity=0.325 Sum_probs=55.3
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 47 SNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
..+.++++.|+..+..+++++|++.|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|
T Consensus 22 ~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d 87 (110)
T 2zgd_A 22 SDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQD 87 (110)
T ss_dssp CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CccchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccc
Confidence 344444445554445568999999999999999999999999999999999999999999998876
No 105
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.64 E-value=1.4e-16 Score=103.06 Aligned_cols=99 Identities=13% Similarity=0.039 Sum_probs=78.8
Q ss_pred hhhccc--cCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChH
Q psy2938 8 AIQTFD--VGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTL 85 (113)
Q Consensus 8 ~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tp 85 (113)
+++..+ ..|.||+|+++..++...+.++...+..++..+..+.+++++|+..+..+++++|++.|++++.+|..|.||
T Consensus 225 dvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~Tp 304 (368)
T 3jue_A 225 DVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDP 304 (368)
T ss_dssp CTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred CCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCH
Confidence 344455 789999999887666555666555566666666666666666666666789999999999999999999999
Q ss_pred HHHHHHcCCHHHHHHHHHcCC
Q psy2938 86 LNWASAFGTQEMVEFLCERGA 106 (113)
Q Consensus 86 L~~A~~~~~~~~v~~Ll~~g~ 106 (113)
||+|+..++.+++++|+..+.
T Consensus 305 L~~A~~~g~~~iv~lLl~~~~ 325 (368)
T 3jue_A 305 LTIAMETANADIVTLLRLAKM 325 (368)
T ss_dssp HHHHHHTTCHHHHHHHHHHHC
T ss_pred HHHHHHCCCHHHHHHHHHcCC
Confidence 999999999999999998764
No 106
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.63 E-value=2.4e-16 Score=95.40 Aligned_cols=45 Identities=20% Similarity=0.220 Sum_probs=21.4
Q ss_pred HHHHHHHhCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHcCCC
Q psy2938 63 ALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGAD 107 (113)
Q Consensus 63 ~~~~~L~~~~~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~ 107 (113)
+++++|++.|++++.+|..|.|||++|+..++.+++++|+++|++
T Consensus 191 ~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~ 235 (240)
T 3eu9_A 191 TVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQA 235 (240)
T ss_dssp HHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC--
T ss_pred HHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhc
Confidence 344444444455554444455555555555555555555544443
No 107
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.62 E-value=1.4e-16 Score=97.67 Aligned_cols=98 Identities=14% Similarity=0.180 Sum_probs=79.2
Q ss_pred hhhccccCCCchhHHHHHhhccCccccccccccchhccc-cchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHH
Q psy2938 8 AIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKT-SNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLL 86 (113)
Q Consensus 8 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL 86 (113)
+++..|..|+||+|+++..++...+..+...+...+.++ ..+.+++++|+..++.+++++|++.|++++.+|..|.|||
T Consensus 69 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l 148 (244)
T 3ui2_A 69 DVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTAL 148 (244)
T ss_dssp CTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred CCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHH
Confidence 567788899999999988777777776666666666555 5565666666666677899999999999999999999999
Q ss_pred HHHH----------------HcCCHHHHHHHHHcC
Q psy2938 87 NWAS----------------AFGTQEMVEFLCERG 105 (113)
Q Consensus 87 ~~A~----------------~~~~~~~v~~Ll~~g 105 (113)
|+|+ ..|+.+++++|++++
T Consensus 149 ~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~ 183 (244)
T 3ui2_A 149 ELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQV 183 (244)
T ss_dssp HHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhc
Confidence 9988 668899999999864
No 108
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.60 E-value=4.8e-16 Score=91.46 Aligned_cols=98 Identities=14% Similarity=0.202 Sum_probs=75.2
Q ss_pred hhhhccccCCCchhHHHHHhhccCccccccccccchhccc-cchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChH
Q psy2938 7 KAIQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKT-SNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTL 85 (113)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tp 85 (113)
.+++..|..|+||+|+++..++...+..+...+...+..+ ..+.+++++|+..+..+++++|++.|++++.+|..|.||
T Consensus 67 ~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tp 146 (183)
T 3deo_A 67 RDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTA 146 (183)
T ss_dssp SCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCH
T ss_pred CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCH
Confidence 3566788899999999887776666666666666665555 556666666776677789999999999999999999999
Q ss_pred HHHHHHc----------------CCHHHHHHHHHc
Q psy2938 86 LNWASAF----------------GTQEMVEFLCER 104 (113)
Q Consensus 86 L~~A~~~----------------~~~~~v~~Ll~~ 104 (113)
||+|+.. |+.+++++|.++
T Consensus 147 l~~A~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 147 LELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp HHHHHHHHHTCCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHhccCcccccHHHHHHHcCHHHHHHHHHHh
Confidence 9999876 556777776543
No 109
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.59 E-value=2.5e-16 Score=100.15 Aligned_cols=97 Identities=8% Similarity=0.047 Sum_probs=73.2
Q ss_pred hhhc-cccCCCchhHHHHHhhccCccccccccccchhccccchHHHHHHHHhCCH---HHHHHHHHhCC-CCccccCCCC
Q psy2938 8 AIQT-FDVGRYQPSHCQAALNQEGNIEYKAHTKTHKTFKTSNILQLIECIRSKDT---DALIETIDSGG-VEVNFMDDVG 82 (113)
Q Consensus 8 ~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~L~~~~-~~~~~~d~~g 82 (113)
+++. .|..|+||+|+++..++...+..+...+...+.++..+.+++++|+..++ .++++.|++.+ ++++.+|..|
T Consensus 122 dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g 201 (327)
T 1sw6_A 122 NLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMN 201 (327)
T ss_dssp CSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTC
T ss_pred CcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCC
Confidence 3455 78899999999887776666666666666666666666666777766655 33444555443 7899999999
Q ss_pred ChHHHHHHH----cCCHHHHHHHHHc
Q psy2938 83 QTLLNWASA----FGTQEMVEFLCER 104 (113)
Q Consensus 83 ~tpL~~A~~----~~~~~~v~~Ll~~ 104 (113)
+||||+|+. .|+.+++++|++.
T Consensus 202 ~tpLh~A~~~~~~~g~~~~v~~Ll~~ 227 (327)
T 1sw6_A 202 RTILHHIIITSGMTGCSAAAKYYLDI 227 (327)
T ss_dssp CCHHHHHHHHHTSTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHccccccHHHHHHHHHH
Confidence 999999999 8999999999987
No 110
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.59 E-value=7.6e-15 Score=81.11 Aligned_cols=63 Identities=24% Similarity=0.283 Sum_probs=53.7
Q ss_pred HHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 50 LQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
.++++.++..+..+++++|++.|++++.+|..|+||||+|+..++.+++++|+++|++++.+|
T Consensus 8 ~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d 70 (123)
T 3aaa_C 8 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPD 70 (123)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCC
T ss_pred chHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCC
Confidence 344444554445568888999999999999999999999999999999999999999998876
No 111
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.59 E-value=3.4e-15 Score=83.91 Aligned_cols=65 Identities=25% Similarity=0.169 Sum_probs=54.9
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 47 SNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
.+.++++.++..+ ..+++++|++.|++++.+|..|+||||+|+..++.+++++|+++|++++.+|
T Consensus 9 ~g~t~L~~A~~~~-~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~ 73 (137)
T 3c5r_A 9 RGETLLHIASIKG-DIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTG 73 (137)
T ss_dssp TCCCHHHHHHHHT-CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC
T ss_pred CCCCHHHHHHHcC-CHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcC
Confidence 3444555555555 4568899999999999999999999999999999999999999999998775
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.57 E-value=1.6e-15 Score=82.95 Aligned_cols=67 Identities=25% Similarity=0.311 Sum_probs=55.9
Q ss_pred ccchHHHHHHHHhCCHHHHHHHHHhCCCCccccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy2938 46 TSNILQLIECIRSKDTDALIETIDSGGVEVNFMDDVGQTLLNWASAFGTQEMVEFLCERGADVNKGK 112 (113)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~g~~~~~~d 112 (113)
+..+.++++.|+..+..+++++|++.|++++.+|..|.||||+|+..++.+++++|+++|++++.+|
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d 72 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARS 72 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccC
Confidence 3444445555555445579999999999999999999999999999999999999999999998765
No 113
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.47 E-value=1.8e-15 Score=98.12 Aligned_cols=99 Identities=8% Similarity=0.002 Sum_probs=53.9
Q ss_pred hhccccCCCchhHHHHHhhccCccccccccccch---hccccchHHHHHHHHhCCHHHHHHHHHhCCCCc---cccCCCC
Q psy2938 9 IQTFDVGRYQPSHCQAALNQEGNIEYKAHTKTHK---TFKTSNILQLIECIRSKDTDALIETIDSGGVEV---NFMDDVG 82 (113)
Q Consensus 9 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~---~~~d~~g 82 (113)
+...+..+.||+|+++..++-..+..+...+... ...+..+.+++++|+..++.+++++|++.|+++ +..+.+
T Consensus 85 l~~~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~- 163 (376)
T 2aja_A 85 AHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN- 163 (376)
T ss_dssp HHHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-
T ss_pred HHHcCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-
Confidence 3344555667777777666555555554333311 011222334555555555556777777776542 222222
Q ss_pred ChHHHHHHHcCCHHHHHHHHHcCCCC
Q psy2938 83 QTLLNWASAFGTQEMVEFLCERGADV 108 (113)
Q Consensus 83 ~tpL~~A~~~~~~~~v~~Ll~~g~~~ 108 (113)
.||||+|+..|+.+++++|+++|+++
T Consensus 164 ~TpLh~Aa~~G~~eiv~~Ll~~ga~~ 189 (376)
T 2aja_A 164 YHAFRLAAENGHLHVLNRLCELAPTE 189 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHSCGGG
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCcc
Confidence 67777777777777777777777664
No 114
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.45 E-value=1.3e-14 Score=94.09 Aligned_cols=95 Identities=9% Similarity=0.121 Sum_probs=75.1
Q ss_pred ccccCCCchhHHHHHhhccCccccccccccc---hhccccchHHHHHHHHhCCHHHHHHHHHhCCCCccc--cCCCCChH
Q psy2938 11 TFDVGRYQPSHCQAALNQEGNIEYKAHTKTH---KTFKTSNILQLIECIRSKDTDALIETIDSGGVEVNF--MDDVGQTL 85 (113)
Q Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~--~d~~g~tp 85 (113)
.++..+.||+|+++..++...+.++...+.. ......+ .++++.|+..++.+++++|++.|++++. .|..|.||
T Consensus 123 ~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~~g~Tp 201 (376)
T 2aja_A 123 VIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYA 201 (376)
T ss_dssp --CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHHHHHHH
T ss_pred HhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCCCCCCH
Confidence 3455678899999999998888888866642 2222333 6666777777777899999999999887 88889999
Q ss_pred HHHHH-HcCCHHHHHHHHHcCC
Q psy2938 86 LNWAS-AFGTQEMVEFLCERGA 106 (113)
Q Consensus 86 L~~A~-~~~~~~~v~~Ll~~g~ 106 (113)
||+|+ ..|+.+++++|+++|+
T Consensus 202 L~~Aa~~~G~~eiv~~Ll~~ga 223 (376)
T 2aja_A 202 FRWAAVGRGHHNVINFLLDCPV 223 (376)
T ss_dssp HHHHHSTTCCHHHHHHHTTSHH
T ss_pred HHHHHHHCCCHHHHHHHHhCCC
Confidence 99999 9999999999998764
No 115
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=50.73 E-value=54 Score=22.08 Aligned_cols=56 Identities=29% Similarity=0.302 Sum_probs=36.7
Q ss_pred cchHHHHHHHHhCCHHHHHHHHHhCCCCcc------------c--cCCCCChHHHHHHHcCCHHHHHHHHH
Q psy2938 47 SNILQLIECIRSKDTDALIETIDSGGVEVN------------F--MDDVGQTLLNWASAFGTQEMVEFLCE 103 (113)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~------------~--~d~~g~tpL~~A~~~~~~~~v~~Ll~ 103 (113)
..+...+..+..|+...+-.++-+.| +++ - .-..|.|-.|.|+...+.+++..|+.
T Consensus 21 w~~l~ac~gv~e~~~~~ve~y~~~gg-~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~ 90 (454)
T 3zrh_A 21 WLFLNACVGVVEGDLAAIEAYKSSGG-DIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLT 90 (454)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHTTTC-CTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHhHHHHcCChhHHHHHHhcCC-chhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhh
Confidence 33444455555677665555554433 221 1 12369999999999999999999886
No 116
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=38.75 E-value=26 Score=14.88 Aligned_cols=17 Identities=24% Similarity=0.159 Sum_probs=11.9
Q ss_pred HHHHHHcCCHHHHHHHH
Q psy2938 86 LNWASAFGTQEMVEFLC 102 (113)
Q Consensus 86 L~~A~~~~~~~~v~~Ll 102 (113)
+..||..|+.+.++.|-
T Consensus 17 iyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 45677777877777764
Done!