BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2942
(117 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9D5L7|SPSB1_MOUSE SPRY domain-containing SOCS box protein 1 OS=Mus musculus GN=Spsb1
PE=1 SV=1
Length = 273
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 90/102 (88%)
Query: 7 TSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLS 66
T+LVG+N +SWGWDLGRNRLYHD KN TYP L+PDETF+VPD FLV LDMD+GTLS
Sbjct: 130 TTLVGNNHESWGWDLGRNRLYHDGKNQPSKTYPAFLEPDETFIVPDSFLVALDMDDGTLS 189
Query: 67 FVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLD 108
F+VDGQY+GVAFRGLKG+KLYP+VSAVWGHCEI M+Y+ GLD
Sbjct: 190 FIVDGQYMGVAFRGLKGKKLYPVVSAVWGHCEIRMRYLNGLD 231
>sp|Q5E9X6|SPSB1_BOVIN SPRY domain-containing SOCS box protein 1 OS=Bos taurus GN=SPSB1
PE=2 SV=1
Length = 273
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 90/102 (88%)
Query: 7 TSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLS 66
T+LVG+N +SWGWDLGRNRLYHD KN TYP L+PDETF+VPD FLV LDMD+GTLS
Sbjct: 130 TTLVGNNHESWGWDLGRNRLYHDGKNQPSKTYPAFLEPDETFIVPDSFLVALDMDDGTLS 189
Query: 67 FVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLD 108
F+VDGQY+GVAFRGLKG+KLYP+VSAVWGHCEI M+Y+ GLD
Sbjct: 190 FIVDGQYMGVAFRGLKGKKLYPVVSAVWGHCEIRMRYLNGLD 231
>sp|Q96BD6|SPSB1_HUMAN SPRY domain-containing SOCS box protein 1 OS=Homo sapiens GN=SPSB1
PE=1 SV=1
Length = 273
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 90/102 (88%)
Query: 7 TSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLS 66
T+LVG+N +SWGWDLGRNRLYHD KN TYP L+PDETF+VPD FLV LDMD+GTLS
Sbjct: 130 TTLVGNNHESWGWDLGRNRLYHDGKNQPSKTYPAFLEPDETFIVPDSFLVALDMDDGTLS 189
Query: 67 FVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLD 108
F+VDGQY+GVAFRGLKG+KLYP+VSAVWGHCEI M+Y+ GLD
Sbjct: 190 FIVDGQYMGVAFRGLKGKKLYPVVSAVWGHCEIRMRYLNGLD 231
>sp|Q96A44|SPSB4_HUMAN SPRY domain-containing SOCS box protein 4 OS=Homo sapiens GN=SPSB4
PE=1 SV=1
Length = 273
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 77/102 (75%), Positives = 89/102 (87%)
Query: 7 TSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLS 66
T+LVGS+ +SWGWDLGR+RLYHD KN G+ YP L PDE F +PD LV+LDMDEGTLS
Sbjct: 130 TALVGSDAESWGWDLGRSRLYHDGKNQPGVAYPAFLGPDEAFALPDSLLVVLDMDEGTLS 189
Query: 67 FVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLD 108
F+VDGQYLGVAFRGLKG+KLYP+VSAVWGHCE+TM+YI GLD
Sbjct: 190 FIVDGQYLGVAFRGLKGKKLYPVVSAVWGHCEVTMRYINGLD 231
>sp|Q8R5B6|SPSB4_MOUSE SPRY domain-containing SOCS box protein 4 OS=Mus musculus GN=Spsb4
PE=1 SV=1
Length = 273
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 77/102 (75%), Positives = 89/102 (87%)
Query: 7 TSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLS 66
T+LVGS+ +SWGWDLGR+RLYHD KN G+ YP L PDE F +PD LV+LDMDEGTLS
Sbjct: 130 TALVGSDSESWGWDLGRSRLYHDGKNRPGVAYPAFLGPDEAFALPDSLLVVLDMDEGTLS 189
Query: 67 FVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLD 108
F+VDGQYLGVAFRGLKG+KLYP+VSAVWGHCE+TM+YI GLD
Sbjct: 190 FIVDGQYLGVAFRGLKGKKLYPVVSAVWGHCEVTMRYINGLD 231
>sp|Q99619|SPSB2_HUMAN SPRY domain-containing SOCS box protein 2 OS=Homo sapiens GN=SPSB2
PE=1 SV=1
Length = 263
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 71/99 (71%), Gaps = 1/99 (1%)
Query: 7 TSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLS 66
+L+GSN +SWGWD+GR +LYH SK YP + E VP++ LV+LDM+EGTL
Sbjct: 121 AALLGSNSESWGWDIGRGKLYHQSKGPGAPQYPAGTQ-GEQLEVPERLLVVLDMEEGTLG 179
Query: 67 FVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIG 105
+ + G YLG AFRGLKGR LYP VSAVWG C++ ++Y+G
Sbjct: 180 YAIGGTYLGPAFRGLKGRTLYPAVSAVWGQCQVRIRYLG 218
>sp|Q5M877|SPSB2_RAT SPRY domain-containing SOCS box protein 2 OS=Rattus norvegicus
GN=Spsb2 PE=2 SV=1
Length = 264
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
Query: 7 TSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLS 66
+L+GSN +SWGWD+GR +LYH SK YP + E VVP++ LV+LDM+EGTL
Sbjct: 121 AALLGSNSESWGWDIGRGKLYHQSKGLEAPQYPAGPQ-GEQLVVPERLLVVLDMEEGTLG 179
Query: 67 FVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIG 105
+ + G YLG AFRGLKGR LYP VSAVWG C++ ++Y+G
Sbjct: 180 YSIGGTYLGPAFRGLKGRTLYPSVSAVWGQCQVRIRYLG 218
>sp|O88838|SPSB2_MOUSE SPRY domain-containing SOCS box protein 2 OS=Mus musculus GN=Spsb2
PE=1 SV=1
Length = 264
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
Query: 7 TSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLS 66
+L+GSN +SWGWD+GR +LYH SK YP + E VVP++ LV+LDM+EGTL
Sbjct: 121 AALLGSNSESWGWDIGRGKLYHQSKGLEAPQYPAGPQ-GEQLVVPERLLVVLDMEEGTLG 179
Query: 67 FVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIG 105
+ + G YLG AFRGLKGR LYP VSAVWG C++ ++Y+G
Sbjct: 180 YSIGGTYLGPAFRGLKGRTLYPSVSAVWGQCQVRIRYMG 218
>sp|B4J6Q0|FBSP1_DROGR F-box/SPRY domain-containing protein 1 OS=Drosophila grimshawi
GN=Fsn PE=3 SV=1
Length = 252
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 69/98 (70%), Gaps = 3/98 (3%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSF 67
+L+GS+DQSWGW+L N L H+ +T +YP LL + V ++ VILD D+ TLSF
Sbjct: 153 ALLGSDDQSWGWNLVENHLLHNG--DTQGSYP-LLNNAPKYQVGERIRVILDCDDNTLSF 209
Query: 68 VVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIG 105
+ ++LGVAFRGL +KLYP VSAV+G+ E++M Y+G
Sbjct: 210 EKNYEFLGVAFRGLPDKKLYPTVSAVYGNTEVSMVYLG 247
>sp|B4KNC5|FBSP1_DROMO F-box/SPRY domain-containing protein 1 OS=Drosophila mojavensis
GN=Fsn PE=3 SV=1
Length = 252
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 67/98 (68%), Gaps = 3/98 (3%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSF 67
+L+GS+DQSWGW+L N L H+ + YP LL + V ++ VILD D+ TLSF
Sbjct: 153 ALLGSDDQSWGWNLVENHLLHNG--DMQGNYP-LLNNAPKYQVGERIRVILDCDDNTLSF 209
Query: 68 VVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIG 105
+ ++LGVAFRGL +KLYP VSAV+G+ E++M Y+G
Sbjct: 210 EKNYEFLGVAFRGLPAKKLYPTVSAVYGNTEVSMVYLG 247
>sp|B4MR59|FBSP1_DROWI F-box/SPRY domain-containing protein 1 OS=Drosophila willistoni
GN=Fsn PE=3 SV=1
Length = 255
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 68/98 (69%), Gaps = 3/98 (3%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSF 67
+L+GS+DQSWGW+L N L H+ + +YP LL + V ++ VILD D+ TLSF
Sbjct: 156 ALLGSDDQSWGWNLVENHLLHNG--DMQGSYP-LLSNAPKYQVGERIRVILDCDDNTLSF 212
Query: 68 VVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIG 105
+ ++LGVAFRGL +KLYP VSAV+G+ E++M Y+G
Sbjct: 213 EKNYEFLGVAFRGLPDKKLYPTVSAVYGNTEVSMVYLG 250
>sp|B3MDR0|FBSP1_DROAN F-box/SPRY domain-containing protein 1 OS=Drosophila ananassae
GN=Fsn PE=3 SV=1
Length = 255
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 68/98 (69%), Gaps = 3/98 (3%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSF 67
+L+GS+DQSWGW+L N L H+ + +YP LL + V ++ +ILD D+ TLSF
Sbjct: 156 ALLGSDDQSWGWNLVENHLLHNG--DMQGSYP-LLNNAPKYQVGERIRIILDCDDNTLSF 212
Query: 68 VVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIG 105
+ ++LGVAFRGL +KLYP VSAV+G+ E++M Y+G
Sbjct: 213 EKNYEFLGVAFRGLPDKKLYPTVSAVYGNTEVSMVYLG 250
>sp|B4LMQ3|FBSP1_DROVI F-box/SPRY domain-containing protein 1 OS=Drosophila virilis GN=Fsn
PE=3 SV=1
Length = 252
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 67/98 (68%), Gaps = 3/98 (3%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSF 67
+L+GS+DQSWGW+L N L H+ + YP LL + V ++ VILD D+ TLSF
Sbjct: 153 ALLGSDDQSWGWNLVENHLLHNG--DMQGNYP-LLNNAPKYQVGERIRVILDCDDNTLSF 209
Query: 68 VVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIG 105
+ ++LGVAFRGL +KLYP VSAV+G+ E++M Y+G
Sbjct: 210 EKNYEFLGVAFRGLPDKKLYPTVSAVYGNTEVSMVYLG 247
>sp|Q290L5|FBSP1_DROPS F-box/SPRY domain-containing protein 1 OS=Drosophila pseudoobscura
pseudoobscura GN=Fsn PE=3 SV=1
Length = 255
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 66/98 (67%), Gaps = 3/98 (3%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSF 67
+L+GS+DQSWGW+L N L H+ G YP LL + V ++ VILD D+ TLSF
Sbjct: 156 ALLGSDDQSWGWNLVENHLLHNGDMQGG--YP-LLNNAPKYQVGERIRVILDCDDNTLSF 212
Query: 68 VVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIG 105
+ ++LGVAFRGL +KL+P VSAV+G+ E++M Y G
Sbjct: 213 EKNYEFLGVAFRGLPDKKLFPTVSAVYGNTEVSMVYCG 250
>sp|B4GBN7|FBSP1_DROPE F-box/SPRY domain-containing protein 1 OS=Drosophila persimilis
GN=Fsn PE=3 SV=1
Length = 255
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 66/98 (67%), Gaps = 3/98 (3%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSF 67
+L+GS+DQSWGW+L N L H+ G YP LL + V ++ VILD D+ TLSF
Sbjct: 156 ALLGSDDQSWGWNLVENHLLHNGDMQGG--YP-LLNNAPKYQVGERIRVILDCDDNTLSF 212
Query: 68 VVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIG 105
+ ++LGVAFRGL +KL+P VSAV+G+ E++M Y G
Sbjct: 213 EKNYEFLGVAFRGLPDKKLFPTVSAVYGNTEVSMVYCG 250
>sp|B4P4K8|FBSP1_DROYA F-box/SPRY domain-containing protein 1 OS=Drosophila yakuba GN=Fsn
PE=3 SV=1
Length = 255
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 68/98 (69%), Gaps = 3/98 (3%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSF 67
+L+GS+DQSWGW+L N L H+ + +YP LL + V ++ VILD ++ TLSF
Sbjct: 156 ALLGSDDQSWGWNLVENHLLHNG--DMQGSYP-LLNNAPKYQVGERIRVILDCEDNTLSF 212
Query: 68 VVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIG 105
+ ++LGVAFRGL +KLYP VSAV+G+ E++M Y+G
Sbjct: 213 EKNYEFLGVAFRGLPDKKLYPTVSAVYGNTEVSMVYLG 250
>sp|B3NRP1|FBSP1_DROER F-box/SPRY domain-containing protein 1 OS=Drosophila erecta GN=Fsn
PE=3 SV=1
Length = 255
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 68/98 (69%), Gaps = 3/98 (3%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSF 67
+L+GS+DQSWGW+L N L H+ + +YP LL + V ++ VILD ++ TLSF
Sbjct: 156 ALLGSDDQSWGWNLVENHLLHNG--DMQGSYP-LLNNAPKYQVGERIRVILDCEDNTLSF 212
Query: 68 VVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIG 105
+ ++LGVAFRGL +KLYP VSAV+G+ E++M Y+G
Sbjct: 213 EKNYEFLGVAFRGLPDKKLYPTVSAVYGNTEVSMVYLG 250
>sp|B4QE02|FBSP1_DROSI F-box/SPRY domain-containing protein 1 OS=Drosophila simulans
GN=Fsn PE=3 SV=2
Length = 255
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 68/98 (69%), Gaps = 3/98 (3%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSF 67
+L+GS+DQSWGW+L N L H+ + +YP LL + V ++ VILD ++ TLSF
Sbjct: 156 ALLGSDDQSWGWNLVENHLLHNG--DMQGSYP-LLNNAPKYQVGERIRVILDCEDNTLSF 212
Query: 68 VVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIG 105
+ ++LGVAFRGL +KLYP VSAV+G+ E++M Y+G
Sbjct: 213 EKNYEFLGVAFRGLPDKKLYPTVSAVYGNTEVSMVYLG 250
>sp|Q9V6L9|FBSP1_DROME F-box/SPRY domain-containing protein 1 OS=Drosophila melanogaster
GN=Fsn PE=1 SV=1
Length = 255
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 68/98 (69%), Gaps = 3/98 (3%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSF 67
+L+GS+DQSWGW+L N L H+ + +YP LL + V ++ VILD ++ TLSF
Sbjct: 156 ALLGSDDQSWGWNLVENHLLHNG--DMQGSYP-LLNNAPKYQVGERIRVILDCEDNTLSF 212
Query: 68 VVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIG 105
+ ++LGVAFRGL +KLYP VSAV+G+ E++M Y+G
Sbjct: 213 EKNYEFLGVAFRGLPDKKLYPTVSAVYGNTEVSMVYLG 250
>sp|B4HQ29|FBSP1_DROSE F-box/SPRY domain-containing protein 1 OS=Drosophila sechellia
GN=Fsn PE=3 SV=1
Length = 255
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 68/98 (69%), Gaps = 3/98 (3%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSF 67
+L+GS+DQSWGW+L N L H+ + +YP LL + V ++ VILD ++ TLSF
Sbjct: 156 ALLGSDDQSWGWNLVENHLLHNG--DMQGSYP-LLNNAPKYQVGERIRVILDCEDNTLSF 212
Query: 68 VVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIG 105
+ ++LGVAFRGL +KLYP VSAV+G+ E++M Y+G
Sbjct: 213 EKNYEFLGVAFRGLPDKKLYPTVSAVYGNTEVSMVYLG 250
>sp|Q7ZXY1|FBSP1_XENLA F-box/SPRY domain-containing protein 1 OS=Xenopus laevis GN=fbxo45
PE=2 SV=1
Length = 280
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 66/98 (67%), Gaps = 3/98 (3%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSF 67
+L+GS+DQSWGW+L N L H+ + N ++P + + + ++ VILDM++ TL+F
Sbjct: 181 ALLGSDDQSWGWNLVDNNLLHNGEVNG--SFPQCNNAPK-YQIGERIRVILDMEDKTLAF 237
Query: 68 VVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIG 105
+YLGVAFRGL LYP VSAV+G+ E+T+ Y+G
Sbjct: 238 ERGYEYLGVAFRGLPKACLYPAVSAVYGNTEVTLVYLG 275
>sp|Q6NZ03|FBSP1_DANRE F-box/SPRY domain-containing protein 1 OS=Danio rerio GN=fbxo45
PE=2 SV=2
Length = 291
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 65/98 (66%), Gaps = 3/98 (3%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSF 67
+L+GS+DQSWGW+L N L H+ + N +P + + + ++ VILDMD+ TL+F
Sbjct: 192 ALLGSDDQSWGWNLVDNNLLHNGEVNG--NFPQCNNAPK-YQIGERIRVILDMDDKTLAF 248
Query: 68 VVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIG 105
++LGVAFRGL L+P VSAV+G+ E+TM Y+G
Sbjct: 249 ERGFEFLGVAFRGLPKTCLFPAVSAVYGNTEVTMVYLG 286
>sp|Q8K3B1|FBSP1_MOUSE F-box/SPRY domain-containing protein 1 OS=Mus musculus GN=Fbxo45
PE=1 SV=2
Length = 286
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 66/98 (67%), Gaps = 3/98 (3%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSF 67
+L+GS+DQSWGW+L N L H+ + N ++P + + + ++ VILDM++ TL+F
Sbjct: 187 ALLGSDDQSWGWNLVDNNLLHNGEVNG--SFPQCNNAPK-YQIGERIRVILDMEDKTLAF 243
Query: 68 VVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIG 105
++LGVAFRGL LYP VSAV+G+ E+T+ Y+G
Sbjct: 244 ERGYEFLGVAFRGLPKACLYPAVSAVYGNTEVTLVYLG 281
>sp|P0CH38|FBSP1_RAT F-box/SPRY domain-containing protein 1 (Fragment) OS=Rattus
norvegicus GN=Fbxo45 PE=2 SV=1
Length = 230
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 66/98 (67%), Gaps = 3/98 (3%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSF 67
+L+GS+DQSWGW+L N L H+ + N ++P + + + ++ VILDM++ TL+F
Sbjct: 131 ALLGSDDQSWGWNLVDNNLLHNGEVNG--SFPQCNNAPK-YQIGERIRVILDMEDKTLAF 187
Query: 68 VVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIG 105
++LGVAFRGL LYP VSAV+G+ E+T+ Y+G
Sbjct: 188 ERGYEFLGVAFRGLPKACLYPAVSAVYGNTEVTLVYLG 225
>sp|B4F739|FBSP1_XENTR F-box/SPRY domain-containing protein 1 OS=Xenopus tropicalis
GN=fbxo45 PE=2 SV=2
Length = 282
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 66/98 (67%), Gaps = 3/98 (3%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSF 67
+L+GS+DQSWGW+L N L H+ + N ++P + + + ++ VILDM++ TL+F
Sbjct: 183 ALLGSDDQSWGWNLVDNNLLHNGEVNG--SFPQCNNAPK-YQIGERIRVILDMEDKTLAF 239
Query: 68 VVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIG 105
++LGVAFRGL LYP VSAV+G+ E+T+ Y+G
Sbjct: 240 ERGYEFLGVAFRGLPKTCLYPAVSAVYGNTEVTLVYLG 277
>sp|P0C2W1|FBSP1_HUMAN F-box/SPRY domain-containing protein 1 OS=Homo sapiens GN=FBXO45
PE=1 SV=1
Length = 286
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 66/98 (67%), Gaps = 3/98 (3%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSF 67
+L+GS+DQSWGW+L N L H+ + N ++P + + + ++ VILDM++ TL+F
Sbjct: 187 ALLGSDDQSWGWNLVDNNLLHNGEVNG--SFPQCNNAPK-YQIGERIRVILDMEDKTLAF 243
Query: 68 VVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIG 105
++LGVAFRGL LYP VSAV+G+ E+T+ Y+G
Sbjct: 244 ERGYEFLGVAFRGLPKVCLYPAVSAVYGNTEVTLVYLG 281
>sp|Q7QGL9|FBSP1_ANOGA F-box/SPRY domain-containing protein 1 OS=Anopheles gambiae GN=Fsn
PE=3 SV=3
Length = 258
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 3/99 (3%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSF 67
+L+G++DQSWGW+L N L H+ + YP LL + V ++ VILD DE TLSF
Sbjct: 159 ALLGADDQSWGWNLVDNLLLHNGDAHG--IYP-LLNNAPKYKVGERIRVILDCDENTLSF 215
Query: 68 VVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGG 106
+ ++LGVAF L + YP V+AV+G+ EI+M Y+G
Sbjct: 216 EKNYEFLGVAFTDLPEKNFYPTVAAVYGNTEISMVYLGA 254
>sp|B0X9V1|FBSP1_CULQU F-box/SPRY domain-containing protein 1 OS=Culex quinquefasciatus
GN=Fsn PE=3 SV=1
Length = 258
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 3/98 (3%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSF 67
+L+G++DQSWGW+L N L H+ + YP LL + V ++ VILD D+ TLSF
Sbjct: 159 ALLGADDQSWGWNLVDNLLLHNGDAHG--IYP-LLNNAPKYKVGERIRVILDCDDNTLSF 215
Query: 68 VVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIG 105
+ ++LGVAF L + YP V+AV+G+ EI+M Y+G
Sbjct: 216 EKNYEFLGVAFTDLPDKVFYPTVAAVYGNTEISMVYLG 253
>sp|Q16XV7|FBSP1_AEDAE F-box/SPRY domain-containing protein 1 OS=Aedes aegypti GN=Fsn PE=3
SV=1
Length = 258
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 3/98 (3%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSF 67
+L+G++DQSWGW+L N L H+ + YP LL + V ++ VILD D+ TLSF
Sbjct: 159 ALLGADDQSWGWNLVDNLLLHNGDAHG--IYP-LLNNAPKYKVGERIRVILDCDDNTLSF 215
Query: 68 VVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIG 105
+ ++LGVAF L + YP V+AV+G+ EI+M Y+G
Sbjct: 216 EKNYEFLGVAFTDLPDKVFYPTVAAVYGNTEISMVYLG 253
>sp|A8QGZ7|FBSP1_BRUMA F-box/SPRY domain-containing protein 1 OS=Brugia malayi
GN=Bm1_56115 PE=3 SV=1
Length = 299
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 65/98 (66%), Gaps = 3/98 (3%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSF 67
+L+GS+DQSWGW+L N+L H+SK + YP + P + + + ++ +I+D ++ ++ F
Sbjct: 200 ALLGSDDQSWGWNLVDNQLLHNSKPIS--PYPHINNPPK-YQMGERIRMIVDCEQHSMYF 256
Query: 68 VVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIG 105
++LG+AF L KL+P + AV+G+ E++M YIG
Sbjct: 257 EKGSEFLGIAFSRLPPLKLFPAMCAVYGNTEVSMVYIG 294
>sp|Q18223|FBSP1_CAEEL F-box/SPRY domain-containing protein 1 OS=Caenorhabditis elegans
GN=fsn-1 PE=1 SV=1
Length = 332
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 61/103 (59%), Gaps = 5/103 (4%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGL-TYPTLLKPDETFVVPDKFLVILDMDEGTLS 66
+L+GS+DQSWGW+L N L H N L YP + P + + V DK +I+D D
Sbjct: 233 ALLGSDDQSWGWNLVDNVLMH---NGAQLGVYPKMNNPPK-YEVGDKIRLIIDCDTHVAY 288
Query: 67 FVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLDL 109
F + ++LG+AF + +LYP V AV+G+ E+TM Y+G +
Sbjct: 289 FERNSEFLGIAFNHIPPLRLYPAVCAVYGNTEVTMVYVGSPQM 331
>sp|A8XT88|FBSP1_CAEBR F-box/SPRY domain-containing protein 1 OS=Caenorhabditis briggsae
GN=fsn-1 PE=3 SV=1
Length = 332
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 5/103 (4%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGL-TYPTLLKPDETFVVPDKFLVILDMDEGTLS 66
+L+GS+DQSWGW+L N L H N L YP + P + + V +K +++D D
Sbjct: 233 ALLGSDDQSWGWNLVDNVLMH---NGVQLGVYPKMNNPPK-YEVGEKIRLVIDCDMHVAY 288
Query: 67 FVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLDL 109
F + ++LG+AF + +L+P V AV+G+ E+TM Y+G +
Sbjct: 289 FERNSEFLGIAFSHIPPLRLFPAVCAVYGNTEVTMVYVGSPQM 331
>sp|D3ZXK7|RN123_RAT E3 ubiquitin-protein ligase RNF123 OS=Rattus norvegicus GN=Rnf123
PE=1 SV=1
Length = 1318
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 10 VGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVV 69
VG S+ +D R R ++ + N G + + D ++D+D+GTLSF +
Sbjct: 162 VGDTHNSYAYDGNRVRKWNVTTTNYG----------KAWAAGDIVSCLIDLDDGTLSFCL 211
Query: 70 DGQYLGVAFRGLK---GRKLYPIVS 91
+G LG AF L G +P +S
Sbjct: 212 NGVSLGTAFENLSRGLGMAYFPAIS 236
>sp|Q5XPI3|RN123_MOUSE E3 ubiquitin-protein ligase RNF123 OS=Mus musculus GN=Rnf123 PE=2
SV=1
Length = 1314
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 10 VGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVV 69
VG S+ +D R R ++ + N G + + D ++D+D+GTLSF +
Sbjct: 164 VGDTHNSYAYDGNRVRKWNVTTTNYG----------KAWAAGDIVSCLIDLDDGTLSFCL 213
Query: 70 DGQYLGVAFRGLK---GRKLYPIVS 91
+G LG AF L G +P +S
Sbjct: 214 NGVSLGTAFENLSRGLGMAYFPAIS 238
>sp|Q5XPI4|RN123_HUMAN E3 ubiquitin-protein ligase RNF123 OS=Homo sapiens GN=RNF123 PE=1
SV=1
Length = 1314
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 10 VGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVV 69
VG S+ +D R R ++ + N G + + D ++D+D+GTLSF +
Sbjct: 164 VGDTHNSYAYDGNRVRKWNVTTTNYG----------KAWAAGDIVSCLIDLDDGTLSFCL 213
Query: 70 DGQYLGVAFRGLK---GRKLYPIVS 91
+G LG AF L G +P +S
Sbjct: 214 NGVSLGTAFENLSRGLGMAYFPAIS 238
>sp|Q571F5|SPSB3_MOUSE SPRY domain-containing SOCS box protein 3 OS=Mus musculus GN=Spsb3
PE=2 SV=2
Length = 354
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 10/85 (11%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSF 67
SL+G ++ SWG L L H + T + F V LD GTL+F
Sbjct: 184 SLLGRDEDSWG--LSYTGLLHHKGDKTSFS--------SRFGQGSIIGVHLDTWHGTLTF 233
Query: 68 VVDGQYLGVAFRGLKGRKLYPIVSA 92
+ + +GVA L+ R+ YP+V +
Sbjct: 234 FKNRKCIGVAATRLQNRRFYPMVCS 258
>sp|Q3MHZ2|SPSB3_BOVIN SPRY domain-containing SOCS box protein 3 OS=Bos taurus GN=SPSB3
PE=2 SV=1
Length = 345
Score = 34.3 bits (77), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 12/105 (11%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSF 67
SL+G ++ SWG L L H + T + F V LD GTL+F
Sbjct: 183 SLLGRDEDSWG--LSYTGLLHHKGDKTSFS--------SRFGQGSIIGVHLDTWHGTLTF 232
Query: 68 VVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLDLYTS 112
+ + +GVA L+ ++ YP+V + + +MK I TS
Sbjct: 233 FKNRKCIGVAATQLQNKRFYPMVCSTAA--KSSMKVIRSCASVTS 275
>sp|Q6PJ21|SPSB3_HUMAN SPRY domain-containing SOCS box protein 3 OS=Homo sapiens GN=SPSB3
PE=1 SV=2
Length = 355
Score = 34.3 bits (77), Expect = 0.26, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 10/85 (11%)
Query: 8 SLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSF 67
SL+G ++ SWG L L H + T + F V LD GTL+F
Sbjct: 184 SLLGRDEDSWG--LSYTGLLHHKGDKTSFS--------SRFGQGSIIGVHLDTWHGTLTF 233
Query: 68 VVDGQYLGVAFRGLKGRKLYPIVSA 92
+ + +GVA L+ ++ YP+V +
Sbjct: 234 FKNRKCIGVAATKLQNKRFYPMVCS 258
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 32.7 bits (73), Expect = 0.74, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 9/74 (12%)
Query: 17 WGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVVDGQYLGV 76
W + LYH+ + L+ +F D +LDM+ T+SF +G+ +
Sbjct: 2109 WLYRAYSGNLYHNGEQTLTLS---------SFTQGDFITCVLDMEARTISFGKNGEEPKL 2159
Query: 77 AFRGLKGRKLYPIV 90
AF + +LYP V
Sbjct: 2160 AFEDVDAAELYPCV 2173
>sp|Q9VNV3|DDX1_DROME ATP-dependent RNA helicase Ddx1 OS=Drosophila melanogaster GN=Ddx1
PE=2 SV=1
Length = 727
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
Query: 46 ETFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFR---GLKGRKLYPIV 90
E F D +LD+ +SF +GQ LGVAFR L YP V
Sbjct: 183 EAFGKADVIGCLLDLKNQEVSFTKNGQNLGVAFRLPDNLAKETFYPAV 230
>sp|Q5M9B1|SPSB3_XENLA SPRY domain-containing SOCS box protein 3 OS=Xenopus laevis
GN=spsb3 PE=2 SV=1
Length = 360
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 56 VILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLDLYTS 112
V LD G L+F + + +GVA L+ +KL+P+V + + +MK I TS
Sbjct: 222 VHLDTWHGVLTFYKNRKRIGVAATQLRNKKLFPLVCSTAA--KSSMKVIRSCCCRTS 276
>sp|Q28DT9|SPSB3_XENTR SPRY domain-containing SOCS box protein 3 OS=Xenopus tropicalis
GN=spsb3 PE=2 SV=1
Length = 360
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 56 VILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAVWGHCEITMKYIGGLDLYTS 112
V LD G L+F + + +GVA L+ +KL+P+V + + +MK I TS
Sbjct: 222 VHLDTWHGVLTFYKNRKCIGVAATQLRNKKLFPMVCSTAA--KSSMKVIRSCCCRTS 276
>sp|Q91ZY8|TRIM9_RAT E3 ubiquitin-protein ligase TRIM9 OS=Rattus norvegicus GN=Trim9
PE=1 SV=1
Length = 710
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 20/90 (22%)
Query: 9 LVGSNDQSWGWDLGRNRLY------HDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDE 62
++G +D++W + NR + H ++ G+T + V+LD++
Sbjct: 608 MLGKDDKAWAMYVDNNRSWFMHNNSHTNRTEGGITKGATIG------------VLLDLNR 655
Query: 63 GTLSFVVDGQYLG-VAFRGLKGRKLYPIVS 91
TL+F V+ + G +AF ++G +P VS
Sbjct: 656 KTLTFFVNNEQQGPIAFENVEGL-FFPAVS 684
>sp|Q8C7M3|TRIM9_MOUSE E3 ubiquitin-protein ligase TRIM9 OS=Mus musculus GN=Trim9 PE=1
SV=2
Length = 817
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 20/90 (22%)
Query: 9 LVGSNDQSWGWDLGRNRLY------HDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDE 62
++G +D++W + NR + H ++ G+T + V+LD++
Sbjct: 704 MLGKDDKAWAMYVDNNRSWFMHNNSHTNRTEGGITKGATIG------------VLLDLNR 751
Query: 63 GTLSFVVDGQYLG-VAFRGLKGRKLYPIVS 91
TL+F V+ + G +AF ++G +P VS
Sbjct: 752 KTLTFFVNNEQQGPIAFENVEGL-FFPAVS 780
>sp|Q5NVJ8|DDX1_PONAB ATP-dependent RNA helicase DDX1 OS=Pongo abelii GN=DDX1 PE=2 SV=1
Length = 740
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 46 ETFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFR---GLKGRKLYP 88
E F + D LD+D+G + F +G+ LG+AF +K + L+P
Sbjct: 184 EEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFP 229
>sp|Q4R7L5|DDX1_MACFA ATP-dependent RNA helicase DDX1 OS=Macaca fascicularis GN=DDX1 PE=2
SV=1
Length = 740
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 46 ETFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFR---GLKGRKLYP 88
E F + D LD+D+G + F +G+ LG+AF +K + L+P
Sbjct: 184 EEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFP 229
>sp|Q92499|DDX1_HUMAN ATP-dependent RNA helicase DDX1 OS=Homo sapiens GN=DDX1 PE=1 SV=2
Length = 740
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 46 ETFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFR---GLKGRKLYP 88
E F + D LD+D+G + F +G+ LG+AF +K + L+P
Sbjct: 184 EEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFP 229
>sp|Q0IIK5|DDX1_BOVIN ATP-dependent RNA helicase DDX1 OS=Bos taurus GN=DDX1 PE=2 SV=1
Length = 740
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 46 ETFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFR---GLKGRKLYP 88
E F + D LD+D+G + F +G+ LG+AF +K + L+P
Sbjct: 184 EEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPPHMKNQALFP 229
>sp|Q641Y8|DDX1_RAT ATP-dependent RNA helicase DDX1 OS=Rattus norvegicus GN=Ddx1 PE=2
SV=1
Length = 740
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 46 ETFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFR---GLKGRKLYP 88
E F + D LD+D+G + F +G+ LG+AF +K + L+P
Sbjct: 184 EEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPAHIKNQALFP 229
>sp|Q91VR5|DDX1_MOUSE ATP-dependent RNA helicase DDX1 OS=Mus musculus GN=Ddx1 PE=1 SV=1
Length = 740
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 46 ETFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFR---GLKGRKLYP 88
E F + D LD+D+G + F +G+ LG+AF +K + L+P
Sbjct: 184 EEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAFEIPAHIKNQALFP 229
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.142 0.450
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,816,156
Number of Sequences: 539616
Number of extensions: 1869250
Number of successful extensions: 3058
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 2994
Number of HSP's gapped (non-prelim): 53
length of query: 117
length of database: 191,569,459
effective HSP length: 84
effective length of query: 33
effective length of database: 146,241,715
effective search space: 4825976595
effective search space used: 4825976595
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)