Query psy2942
Match_columns 117
No_of_seqs 117 out of 644
Neff 6.8
Searched_HMMs 29240
Date Fri Aug 16 21:32:46 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy2942.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/2942hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3emw_A SPRY domain-containing 99.9 7.7E-26 2.6E-30 168.6 13.8 102 4-106 116-217 (217)
2 2jk9_A SPRY domain-containing 99.9 1.5E-25 5.1E-30 165.5 13.9 106 5-110 107-212 (212)
3 2yyo_A SPRY domain-containing 99.9 9E-25 3.1E-29 157.5 11.0 95 6-108 67-166 (171)
4 3toj_A SET1/ASH2 histone methy 99.9 2.2E-23 7.6E-28 154.7 12.8 90 7-106 80-177 (213)
5 2afj_A Gene rich cluster, C9 g 99.9 1.3E-24 4.4E-29 162.3 4.5 109 5-114 114-222 (226)
6 3uv9_A TRIM5alpha, tripartite 99.1 2.5E-10 8.7E-15 82.9 8.1 83 8-92 84-172 (186)
7 2vok_A 52 kDa RO protein; poly 99.1 2.8E-10 9.4E-15 83.0 8.2 75 8-93 91-170 (188)
8 2wl1_A Pyrin, marenostrin; amy 99.0 5.1E-10 1.7E-14 81.6 6.2 73 9-92 96-173 (191)
9 2fbe_A Predicted: similar to R 99.0 1.9E-09 6.4E-14 79.3 7.8 74 9-93 93-171 (201)
10 3kb5_A Tripartite motif-contai 98.9 5.1E-09 1.8E-13 76.3 7.3 75 10-92 97-178 (193)
11 4b3n_A Maltose-binding peripla 98.4 7.1E-07 2.4E-11 73.8 8.7 81 10-92 506-592 (602)
12 2e63_A KIAA1787 protein; struc 98.1 9.4E-06 3.2E-10 58.2 7.7 75 13-96 89-163 (170)
13 2yue_A Protein neuralized; str 97.4 0.00074 2.5E-08 48.2 7.8 52 49-101 107-159 (168)
14 1wi5_A RRP5 protein homolog; S 43.0 30 0.001 22.1 3.8 34 45-78 65-101 (119)
15 3tur_A Mycobacteria tuberculos 40.6 28 0.00095 26.3 3.8 28 47-74 125-152 (287)
16 1zps_A PRA-CH, phosphoribosyl- 34.1 1.1E+02 0.0037 20.8 5.6 60 15-90 55-114 (138)
17 1cpn_A Circularly permuted; hy 33.2 74 0.0025 22.4 4.9 37 57-93 90-126 (208)
18 4ewf_A Beta-lactamase; ABA-san 33.0 38 0.0013 24.4 3.4 22 50-72 24-45 (275)
19 3pe9_A Fibronectin(III)-like m 32.7 89 0.0031 19.5 4.8 33 45-77 10-47 (98)
20 4doo_A Chalcone-flavanone isom 32.5 90 0.0031 21.9 5.3 29 47-76 139-167 (205)
21 3o5s_A Beta-glucanase; glycosy 32.2 82 0.0028 22.7 5.1 39 57-95 172-210 (238)
22 2ayh_A 1,3-1,4-beta-D-glucan 4 32.1 94 0.0032 21.5 5.3 36 58-93 149-184 (214)
23 2k52_A Uncharacterized protein 30.4 73 0.0025 18.6 3.9 23 47-69 45-70 (80)
24 3i4i_A 1,3-1,4-beta-glucanase; 28.4 99 0.0034 22.2 5.0 39 57-95 168-206 (234)
25 1ajk_A CPA16M-84, circularly p 25.8 1.4E+02 0.0047 21.2 5.3 37 57-93 65-101 (214)
26 1ajo_A CPA16M-127, circularly 24.5 1.3E+02 0.0045 21.1 5.0 38 58-95 23-60 (214)
27 4aeq_A Colicin-M immunity prot 22.8 62 0.0021 20.7 2.6 14 55-68 83-96 (98)
28 2kl8_A OR15; structural genomi 22.6 65 0.0022 19.3 2.5 21 62-82 30-50 (85)
29 3flp_A SAP-like pentraxin; phy 20.8 1.3E+02 0.0045 21.0 4.3 24 53-76 101-124 (217)
30 4dok_A Similarity to chalcone- 20.4 83 0.0028 22.4 3.2 31 45-75 135-167 (208)
No 1
>3emw_A SPRY domain-containing SOCS box protein 2; apoptosis nucleus, apoptosis, UBL conjugation pathwayc, CL transcription regulation, transcription, phosphoprotein; 1.80A {Homo sapiens} PDB: 3ek9_A
Probab=99.94 E-value=7.7e-26 Score=168.57 Aligned_cols=102 Identities=53% Similarity=1.090 Sum_probs=86.7
Q ss_pred cCccccccCCCceeeEEcCCceEEcCCccCCCcccCCcCCCCCCccCCCEEEEEEeCCCCEEEEEECCEEeeeeeeccCC
Q psy2942 4 CLVTSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFRGLKG 83 (117)
Q Consensus 4 ~~~~~~lG~d~~SWg~~~~~g~~~h~~~~~~~~~y~~~~~~g~~~~~gd~IG~~lD~~~gtLsF~~NG~~lG~AF~~l~~ 83 (117)
.+..+.+|.|+.||+|.+.++.+||++....+..||...+ ++.+..+|+|||+||+++|+|+||+||+.+|+||+++++
T Consensus 116 ~g~~~~lG~~~~SW~l~~~~g~~~h~~~~~~~~~~~~~~~-~~~~~~~d~IGV~LD~~~G~LsFy~ng~~lg~aF~~~~~ 194 (217)
T 3emw_A 116 DHYAALLGSNSESWGWDIGRGKLYHQSKGPGAPQYPAGTQ-GEQLEVPERLLVVLDMEEGTLGYAIGGTYLGPAFRGLKG 194 (217)
T ss_dssp SSSCCCTTSSTTEEEEETTTCBEESSCCSSCCCBSSSSST-TCCCCCCSEEEEEEETTTTEEEEEETTEEEEEEECCCTT
T ss_pred CCccccccCCCCEEEEEeCCCcEEeCCcccCCcccccccc-ccCCCCCCEEEEEEEcCCCEEEEEECCeEeEEEEECCCC
Confidence 3567889999999999987889999986433345631000 246788999999999999999999999999999999999
Q ss_pred CceEEEEEeeeCCcEEEEEEccC
Q psy2942 84 RKLYPIVSAVWGHCEITMKYIGG 106 (117)
Q Consensus 84 ~~lyPavs~~~~~~~v~l~~~~~ 106 (117)
++|||+|++.+++|+|+|+|+++
T Consensus 195 ~~LyP~~sl~~g~~~v~l~~~~~ 217 (217)
T 3emw_A 195 RTLYPAVSAVWGQCQVRIRYLGE 217 (217)
T ss_dssp CCBEEEEEECSTTCEEEEEEEEC
T ss_pred CEEEEEEEeccCCcEEEEEeCCC
Confidence 99999999999999999999885
No 2
>2jk9_A SPRY domain-containing SOCS box protein 1; transcription regulation, transcription; 1.79A {Homo sapiens} PDB: 3f2o_A 2fnj_A 2v24_A 2ihs_A
Probab=99.93 E-value=1.5e-25 Score=165.55 Aligned_cols=106 Identities=74% Similarity=1.349 Sum_probs=88.7
Q ss_pred CccccccCCCceeeEEcCCceEEcCCccCCCcccCCcCCCCCCccCCCEEEEEEeCCCCEEEEEECCEEeeeeeeccCCC
Q psy2942 5 LVTSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFRGLKGR 84 (117)
Q Consensus 5 ~~~~~lG~d~~SWg~~~~~g~~~h~~~~~~~~~y~~~~~~g~~~~~gd~IG~~lD~~~gtLsF~~NG~~lG~AF~~l~~~ 84 (117)
++.+.+|.|+.||+|.+.++++||++....+..||.....++.+..+|+|||+||+++|+|+||+||+.+++||++++++
T Consensus 107 g~~~~~G~~~~sw~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~IGv~LD~e~G~lsFy~ng~~l~~aF~~~~~~ 186 (212)
T 2jk9_A 107 GYTTLVGNNHESWGWDLGRNRLYHDGKNQPSKTYPAFLEPDETFIVPDSFLVALDMDDGTLSFIVDGQYMGVAFRGLKGK 186 (212)
T ss_dssp SSCCCTTSSTTEEEEETTTTEEEESTTTSCCEESSTTSCTTCCCCCCSEEEEEEETTTTEEEEEETTEEEEEEECCCTTC
T ss_pred CcccccccCCCcEeeECCCCcEEECCcccCccccCcccccCCcCCCCCEEEEEEECCCCEEEEEECCEEeEEEeccCCCC
Confidence 46678999999999998788999988653222343211115677899999999999999999999999999999999888
Q ss_pred ceEEEEEeeeCCcEEEEEEccCCCCC
Q psy2942 85 KLYPIVSAVWGHCEITMKYIGGLDLY 110 (117)
Q Consensus 85 ~lyPavs~~~~~~~v~l~~~~~~~~~ 110 (117)
+|||+|++.+++++|+|+|+++++|+
T Consensus 187 ~l~P~f~l~~g~~~v~l~~~~~~~~~ 212 (212)
T 2jk9_A 187 KLYPVVSAVWGHCEIRMRYLNGLDPE 212 (212)
T ss_dssp CBEEEEEECCTTCEEEEEEEEEEC--
T ss_pred EEeeEEEEEcCCcEEEEEECCCcCCC
Confidence 99999999889999999999999985
No 3
>2yyo_A SPRY domain-containing protein 3; NPPSFA, national project on protein structural and functional analyses; 2.00A {Homo sapiens}
Probab=99.92 E-value=9e-25 Score=157.51 Aligned_cols=95 Identities=15% Similarity=0.206 Sum_probs=82.9
Q ss_pred ccccccCCCceeeEEcCCceEEcCCccCCCcccCCcCCCCCCccCCCEEEEEEeCC-----CCEEEEEECCEEeeeeeec
Q psy2942 6 VTSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMD-----EGTLSFVVDGQYLGVAFRG 80 (117)
Q Consensus 6 ~~~~lG~d~~SWg~~~~~g~~~h~~~~~~~~~y~~~~~~g~~~~~gd~IG~~lD~~-----~gtLsF~~NG~~lG~AF~~ 80 (117)
.+.++|+|..||+|+..++++||+... ++.| |++|++||+|||+||++ .++|+|++||+.||+||++
T Consensus 67 ~~~~~G~d~~S~gy~~~dG~~~~~~~~--~~~y------g~~f~~GDvIGc~id~~~~~~~~~~i~Ft~NG~~lg~af~~ 138 (171)
T 2yyo_A 67 LDHQPGWLPDSVAYHADDGKLYNGRAK--GRQF------GSKCNSGDRIGCGIEPVSFDVQTAQIFFTKNGKRVGSTIMP 138 (171)
T ss_dssp TTSCTTSSTTCEEEETTTCCEESSSSC--CBCC------SCCCCTTCEEEEEECGGGGSSSCEEEEEEETTEEEEEEEES
T ss_pred CccCCCccCCEEEEEcCCCeEEeCCCC--CCcC------CCCCCCCCEEEEEEEeccCCCCcEEEEEEECCEEcCceecC
Confidence 356799999999999878999998642 3467 89999999999999998 4999999999999999999
Q ss_pred cCCCceEEEEEeeeCCcEEEEEEccCCC
Q psy2942 81 LKGRKLYPIVSAVWGHCEITMKYIGGLD 108 (117)
Q Consensus 81 l~~~~lyPavs~~~~~~~v~l~~~~~~~ 108 (117)
++..+|||||++...+++|++||....-
T Consensus 139 ~~~~~lyPaV~l~~~g~~v~vNFG~~~~ 166 (171)
T 2yyo_A 139 MSPDGLFPAVGMHSLGEEVRLHLNAELS 166 (171)
T ss_dssp SCSSSCEEEEEECSTTEEEEEETTCCC-
T ss_pred CcCCCEEEEEEEecCCCEEEEECCCCCc
Confidence 9877999999997669999999877443
No 4
>3toj_A SET1/ASH2 histone methyltransferase complex subun; transcription, SPRY domain, prote binding, histone methylation, RBBP5, DPY-30, nuclear; 2.07A {Homo sapiens}
Probab=99.90 E-value=2.2e-23 Score=154.68 Aligned_cols=90 Identities=18% Similarity=0.415 Sum_probs=81.0
Q ss_pred cccccCCCceeeEEcCCceEEcCCccCCCcccCCcCCCCCCccCCCEEEEEEeCCC--------CEEEEEECCEEeeeee
Q psy2942 7 TSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDE--------GTLSFVVDGQYLGVAF 78 (117)
Q Consensus 7 ~~~lG~d~~SWg~~~~~g~~~h~~~~~~~~~y~~~~~~g~~~~~gd~IG~~lD~~~--------gtLsF~~NG~~lG~AF 78 (117)
+..+|+|..||+|+..+|++||++.. +.| |+.|.+||+|||+||+++ |+|+|++||+.+|+||
T Consensus 80 ~~~~G~d~~S~gy~~~~G~~~h~~~~---~~y------g~~~~~GDvIGc~ld~~~~~~~~~~~g~i~Ft~NG~~lg~aF 150 (213)
T 3toj_A 80 QAPLGYDKFSYSWRSKKGTKFHQSIG---KHY------SSGYGQGDVLGFYINLPEDTISGRGSSEIIFYKNGVNQGVAY 150 (213)
T ss_dssp TSCTTSSTTEEEEETTTTCEEETTEE---ECC------SCCCCTTCEEEEEEEECCC-----CCCEEEEEETTEEEEEEE
T ss_pred ccCCCCCCCcEEEECCCCeEEeCCcC---ccc------CCCCCCCCEEEEEEEcCCCccccCCccEEEEEeCCeeeeeeE
Confidence 45799999999999878999999753 367 789999999999999998 7999999999999999
Q ss_pred eccCCCceEEEEEeeeCCcEEEEEEccC
Q psy2942 79 RGLKGRKLYPIVSAVWGHCEITMKYIGG 106 (117)
Q Consensus 79 ~~l~~~~lyPavs~~~~~~~v~l~~~~~ 106 (117)
++++.++|||||++ ..++++++||...
T Consensus 151 ~~~~~~~lyPavsl-~~~~~v~~NFG~~ 177 (213)
T 3toj_A 151 KDIFEGVYFPAISL-YKSCTVSINFGPC 177 (213)
T ss_dssp ESCCSSCBEEEEEE-ESSCEEEEECSSS
T ss_pred EcCCCCcEEEEEEc-CCCCEEEEECCCC
Confidence 99987899999997 4589999998764
No 5
>2afj_A Gene rich cluster, C9 gene; beta sandwich, gene regulation; NMR {Mus musculus} SCOP: b.29.1.22
Probab=99.90 E-value=1.3e-24 Score=162.30 Aligned_cols=109 Identities=50% Similarity=1.009 Sum_probs=90.9
Q ss_pred CccccccCCCceeeEEcCCceEEcCCccCCCcccCCcCCCCCCccCCCEEEEEEeCCCCEEEEEECCEEeeeeeeccCCC
Q psy2942 5 LVTSLVGSNDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFRGLKGR 84 (117)
Q Consensus 5 ~~~~~lG~d~~SWg~~~~~g~~~h~~~~~~~~~y~~~~~~g~~~~~gd~IG~~lD~~~gtLsF~~NG~~lG~AF~~l~~~ 84 (117)
+..+++|.++.||+|.+.++++||++.......||... .++.+..+|+|||+||+++|+|+||+||+.+++||+++.++
T Consensus 114 ~~~~~~G~~~~sw~~~~~~~~~~h~~~~~~~~~~~~~~-~~~~~~~~~rIGV~LD~e~G~lSFy~ng~~l~~aF~~~~~~ 192 (226)
T 2afj_A 114 HYAALLGSNSESWGWDIGRGKLYHQSKGLEAPQYPAGP-QGEQLVVPERLLVVLDMEEGTLGYSIGGTYLGPAFRGLKGR 192 (226)
T ss_dssp SSSCCCCCSCEEEEEEGGGTSTTSSSSCCSCSSSSCCS-GGGGSCCSSCEEEEEETTTTEEEEESTTCSCSTTHHHHHHH
T ss_pred cccccccCCCCcEEEEcCCCeEEECccccCcccccccc-cCCcCCCCCEEEEEEECCCCEEEEEECCeEeEEEEEcCCCC
Confidence 56678999999999998678899987643223343110 02356889999999999999999999999999999998888
Q ss_pred ceEEEEEeeeCCcEEEEEEccCCCCCCCcc
Q psy2942 85 KLYPIVSAVWGHCEITMKYIGGLDLYTSYL 114 (117)
Q Consensus 85 ~lyPavs~~~~~~~v~l~~~~~~~~~~~~~ 114 (117)
+|||+|++.+++++|+|+++++++++|++.
T Consensus 193 ~L~P~f~l~~g~~~v~l~~~~g~~~~~l~~ 222 (226)
T 2afj_A 193 TLYPSVSAVWGQCQVRIRYMGERRVEETRR 222 (226)
T ss_dssp CCEEEEEECCTTSCCEEEEESCCCCSSSCC
T ss_pred EEEEEEEcccCCCEEEEEEcCCCChhhhhh
Confidence 999999998889999999999999999874
No 6
>3uv9_A TRIM5alpha, tripartite motif-containing protein 5; domain SWAP, antiretroviral, HIV capsid, ligase; 1.55A {Macaca mulatta}
Probab=99.11 E-value=2.5e-10 Score=82.88 Aligned_cols=83 Identities=18% Similarity=0.381 Sum_probs=54.8
Q ss_pred ccccCCCceeeEEcCCc---eEEcCCccCCCcccCCcCCCCCCccCCCEEEEEEeCCCCEEEEEE--CCEEeeeeeecc-
Q psy2942 8 SLVGSNDQSWGWDLGRN---RLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVV--DGQYLGVAFRGL- 81 (117)
Q Consensus 8 ~~lG~d~~SWg~~~~~g---~~~h~~~~~~~~~y~~~~~~g~~~~~gd~IG~~lD~~~gtLsF~~--NG~~lG~AF~~l- 81 (117)
..+|.++.+|++.+.++ .++|++.... ...+...+......+.+|||+||+++|+|+||- +...+-.+|...
T Consensus 84 ~~~~~~~g~W~l~~~~~~~y~~~~~~~~~~--~~~~~~~~l~~~~~p~rVGVfLDye~G~lSFYnv~d~~~lI~tF~~~~ 161 (186)
T 3uv9_A 84 ENYQPKYGYWVIGLQEGVKYSVFQDGSSHT--PFAPFIVPLSVIICPDRVGVFVDYEACTVSFFNITNHGFLIYKFSQCS 161 (186)
T ss_dssp TCCCGGGTEEEEEEETTTEEEEEECCCTTS--TTSCEEEECCCSSCCSEEEEEEETTTTEEEEEETTTTTEEEEEECSCC
T ss_pred cccCCCCCEEEEEECCCCEEEEEeCCCccc--cCCCccCcccccccCCEEEEEeecCCCEEEEEeCCCCceEEEEeCCcC
Confidence 45788999999976443 4788876421 000000001223457899999999999999995 323455677543
Q ss_pred CCCceEEEEEe
Q psy2942 82 KGRKLYPIVSA 92 (117)
Q Consensus 82 ~~~~lyPavs~ 92 (117)
..+||||+|++
T Consensus 162 Fs~pL~P~F~~ 172 (186)
T 3uv9_A 162 FSKPVFPYLNP 172 (186)
T ss_dssp CSSCBEEEEEC
T ss_pred CCCCEEeEEEC
Confidence 37899999997
No 7
>2vok_A 52 kDa RO protein; polymorphism, immune system, metal-binding, tripartite motif (TRIM) protein, SPRY systemic lupus erythematosus, zinc, B30.2; 1.30A {Mus musculus} PDB: 2vol_B* 2iwg_B*
Probab=99.10 E-value=2.8e-10 Score=82.95 Aligned_cols=75 Identities=17% Similarity=0.185 Sum_probs=54.5
Q ss_pred ccccCCCceeeEEcCCc--eEEcCCccCCCcccCCcCCCCCCccCCCEEEEEEeCCCCEEEEEECC-E-Eeeeeeec-cC
Q psy2942 8 SLVGSNDQSWGWDLGRN--RLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVVDG-Q-YLGVAFRG-LK 82 (117)
Q Consensus 8 ~~lG~d~~SWg~~~~~g--~~~h~~~~~~~~~y~~~~~~g~~~~~gd~IG~~lD~~~gtLsF~~NG-~-~lG~AF~~-l~ 82 (117)
..+|.++.+|++.+.++ .++|+... .. ..-..+.+|||+||+++|+|+||... . .+-.+|.. -.
T Consensus 91 ~~~~~~~~~W~l~~~~~~y~~~~~~~~----~l-------~~~~~~~rVGVfLDye~G~lSFY~v~~~~~~I~tF~~~~F 159 (188)
T 2vok_A 91 FSLSPENGFWTIWLWQDSYEAGTSPQT----TL-------HIQVPPCQIGIFVDYEAGVVSFYNITDHGSLIYTFSECVF 159 (188)
T ss_dssp CCCSTTTTEEEEEEETTEEEECSSSCE----EE-------CCSSCCSEEEEEEETTTTEEEEEETTTTTEEEEEECSCCC
T ss_pred cccCCCCCEEEEEEECCEEEEEeCCcc----CE-------ecCCCCCEEEEEEEcCCCEEEEEECCCCCeeeEEecCCCC
Confidence 36899999999987443 57776432 11 11234689999999999999999642 3 56667876 45
Q ss_pred CCceEEEEEee
Q psy2942 83 GRKLYPIVSAV 93 (117)
Q Consensus 83 ~~~lyPavs~~ 93 (117)
.+||||+|++.
T Consensus 160 s~pL~P~F~~~ 170 (188)
T 2vok_A 160 AGPLRPFFNVG 170 (188)
T ss_dssp CSCEEEEEECC
T ss_pred CCCEEeEEEec
Confidence 78999999963
No 8
>2wl1_A Pyrin, marenostrin; amyloidosis, polymorphism, cytoskeleton, actin-binding inflammatory response, metal-binding, signaling protein; 1.35A {Homo sapiens}
Probab=99.00 E-value=5.1e-10 Score=81.59 Aligned_cols=73 Identities=15% Similarity=0.142 Sum_probs=51.8
Q ss_pred cccCCCceeeEEcCC---ceEEcCCccCCCcccCCcCCCCCCccCCCEEEEEEeCCCCEEEEEEC-CEEeeeeeec-cCC
Q psy2942 9 LVGSNDQSWGWDLGR---NRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVVD-GQYLGVAFRG-LKG 83 (117)
Q Consensus 9 ~lG~d~~SWg~~~~~---g~~~h~~~~~~~~~y~~~~~~g~~~~~gd~IG~~lD~~~gtLsF~~N-G~~lG~AF~~-l~~ 83 (117)
.+|.++.+|++.+.+ ..++|+.... . ..-....+|||+||+++|+|+||.. ...+-.+|.. -..
T Consensus 96 ~~~~~~~~W~l~~~~~~~y~~~~~~~~~----l-------~~~~~~~rVGVfLDye~G~lSFY~v~~~~~i~tF~~~~Fs 164 (191)
T 2wl1_A 96 TLSPENGYWVVIMMKENEYQASSVPPTR----L-------LIKEPPKRVGIFVDYRVGSISFYNVTARSHIYTFASCSFS 164 (191)
T ss_dssp CCCGGGTEEEEEEEETTEEEECCSSCEE----C-------CCSSCCSEEEEEEETTTTEEEEEETTTTEEEEEECCCCCC
T ss_pred ccCCCCCEEEEEEeCCCEEEEEcCCCcc----C-------ccccCCcEEEEEEEcCCCEEEEEECCCCcceEEeCCCCCC
Confidence 578888999987632 2356654321 1 1223468999999999999999953 2345667876 457
Q ss_pred CceEEEEEe
Q psy2942 84 RKLYPIVSA 92 (117)
Q Consensus 84 ~~lyPavs~ 92 (117)
+||||+|++
T Consensus 165 ~pl~P~F~~ 173 (191)
T 2wl1_A 165 GPLQPIFSP 173 (191)
T ss_dssp SCEEEEEEC
T ss_pred CCEEeEEEc
Confidence 899999996
No 9
>2fbe_A Predicted: similar to RET finger protein-like 1; dimer, jellyroll beta-sandwich fold, unknown function; 2.52A {Homo sapiens} SCOP: b.29.1.22
Probab=98.96 E-value=1.9e-09 Score=79.28 Aligned_cols=74 Identities=8% Similarity=-0.071 Sum_probs=51.6
Q ss_pred cccCCCceeeEEcCCc---eEEcCCccCCCcccCCcCCCCCCccCCCEEEEEEeCCCCEEEEEEC-CEEeeeeeec-cCC
Q psy2942 9 LVGSNDQSWGWDLGRN---RLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVVD-GQYLGVAFRG-LKG 83 (117)
Q Consensus 9 ~lG~d~~SWg~~~~~g---~~~h~~~~~~~~~y~~~~~~g~~~~~gd~IG~~lD~~~gtLsF~~N-G~~lG~AF~~-l~~ 83 (117)
.++.++.+|++.+.++ .++|+.. + .. ..-....+|||+||+++|+|+||.. ...+-.+|.. -..
T Consensus 93 ~~~~~~g~W~l~~~~~~~y~~~~~~~-~---~l-------~~~~~~~rVGVfLDye~G~lSFY~v~~~~~i~tF~~~~Fs 161 (201)
T 2fbe_A 93 ELSSEHGFLTVGCREGKVFAASTVPM-T---PL-------WVSPQLHRVGIFLDVGMRSIAFYNVSDGCHIYTFIEIPVC 161 (201)
T ss_dssp CCCTTTTEEEEEEETTTEEEECSSSC-E---EE-------CCCTTCCEEEEEEETTTTEEEEEETTTTEEEEEECSCCCS
T ss_pred cccCCCCEEEEEEeCCCEEEEEcCCc-c---cC-------ccCCCCCEEEEEEEcCCCEEEEEeCCCCceeEEEcCCCCC
Confidence 4678889999987433 2445321 1 11 1224568999999999999999964 3455667876 357
Q ss_pred CceEEEEEee
Q psy2942 84 RKLYPIVSAV 93 (117)
Q Consensus 84 ~~lyPavs~~ 93 (117)
++|||+|++.
T Consensus 162 ~pL~P~F~~~ 171 (201)
T 2fbe_A 162 EPWRPFFAHK 171 (201)
T ss_dssp SCEEEEEEEE
T ss_pred CCEEeEEEec
Confidence 8999999974
No 10
>3kb5_A Tripartite motif-containing protein 72; B30.2, gustavus, SPRY, TRIM21, TRIM72, PRY, high resolution, Mg53; 1.50A {Homo sapiens}
Probab=98.87 E-value=5.1e-09 Score=76.28 Aligned_cols=75 Identities=19% Similarity=0.227 Sum_probs=50.6
Q ss_pred ccCCCceeeEEcCCc---eEEcCCccCCCcccCCcCCCCCCccCCCEEEEEEeCCCCEEEEEECC----EEeeeeeeccC
Q psy2942 10 VGSNDQSWGWDLGRN---RLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVVDG----QYLGVAFRGLK 82 (117)
Q Consensus 10 lG~d~~SWg~~~~~g---~~~h~~~~~~~~~y~~~~~~g~~~~~gd~IG~~lD~~~gtLsF~~NG----~~lG~AF~~l~ 82 (117)
++.++.+|++.+.++ .++|+.... ...+ .+-....+|||+||+++|+|+||--. ..+-..|..-.
T Consensus 97 ~~~~~~~W~l~~~~~~~y~~~~~~~~~--~~l~------~~~~~~~rVGVfLDye~G~lSFY~v~~~~~~s~I~tF~~~F 168 (193)
T 3kb5_A 97 AVPSQGLWLLGLREGKILEAHVEAKEP--RALR------SPERRPTRIGLYLSFGDGVLSFYDASDADALVPLFAFHERL 168 (193)
T ss_dssp CSGGGTEEEEEEETTTEEEECCSSSSC--EECC------CCSSCCSEEEEEEETTTTEEEEEECCSTTCCEEEEEECSCC
T ss_pred CCCCCCEEEEEEeCCCEEEEEeCCCcc--EEEe------ecCCCCCEEEEEEEcCCCEEEEEeCCCCCCceEEEEeCCCC
Confidence 455678999887443 345554321 0010 01234679999999999999999532 46666787656
Q ss_pred CCceEEEEEe
Q psy2942 83 GRKLYPIVSA 92 (117)
Q Consensus 83 ~~~lyPavs~ 92 (117)
.+||||+|+.
T Consensus 169 t~pl~P~F~~ 178 (193)
T 3kb5_A 169 PRPVYPFFDV 178 (193)
T ss_dssp CSCEEEEEEC
T ss_pred CCCeECEEEc
Confidence 8999999996
No 11
>4b3n_A Maltose-binding periplasmic protein, tripartite motif-containing protein 5; sugar binding protein-ligase complex; HET: MAL MES; 3.30A {Escherichia coli} PDB: 2lm3_A
Probab=98.43 E-value=7.1e-07 Score=73.75 Aligned_cols=81 Identities=19% Similarity=0.385 Sum_probs=51.1
Q ss_pred ccCCCceeeEEcCCc---eEEcCCccCCCcccCCcCCCCCCccCCCEEEEEEeCCCCEEEEEEC-C-EEeeeeeecc-CC
Q psy2942 10 VGSNDQSWGWDLGRN---RLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVVD-G-QYLGVAFRGL-KG 83 (117)
Q Consensus 10 lG~d~~SWg~~~~~g---~~~h~~~~~~~~~y~~~~~~g~~~~~gd~IG~~lD~~~gtLsF~~N-G-~~lG~AF~~l-~~ 83 (117)
++.++.+|++.+.++ .++|+..... ...+...+-..-..+.||||+||+++|+||||-- . ..+-..|.+. ..
T Consensus 506 ~~~~~g~w~~~~~~~~~y~~~~~~~~~~--~~~~~~~~l~~~~~~~rvgv~ld~~~g~~sFy~~~~~~~~i~tf~~~~f~ 583 (602)
T 4b3n_A 506 YQPKYGYWVIGLQEGVKYSVFQDGSSHT--PFAPFIVPLSVIICPDRVGVFVDYEACTVSFFNITNHGFLIYKFSQCSFS 583 (602)
T ss_dssp CCGGGTEEEEEEETTTEEEEEECCCSSC--CSSCEEEECCCSSCCSEEEEEEETTTTEEEEEETTTTTEEEEEECSCCCC
T ss_pred cCCCCcEEEEEEecCCeEEEEeCCCccc--ccCCcccccccCCCCCEEEEEEecCCCEEEEEeCCCCceeeEeCCCcCCC
Confidence 456677899876443 4778765321 0000000011223468999999999999999963 2 2444567543 47
Q ss_pred CceEEEEEe
Q psy2942 84 RKLYPIVSA 92 (117)
Q Consensus 84 ~~lyPavs~ 92 (117)
++|||.|+.
T Consensus 584 ~~l~P~f~~ 592 (602)
T 4b3n_A 584 KPVFPYLNP 592 (602)
T ss_dssp SCBEEEEEC
T ss_pred CCEeCeEEC
Confidence 899999996
No 12
>2e63_A KIAA1787 protein; structure genomics, neuralized domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.12 E-value=9.4e-06 Score=58.20 Aligned_cols=75 Identities=23% Similarity=0.310 Sum_probs=55.0
Q ss_pred CCceeeEEcCCceEEcCCccCCCcccCCcCCCCCCccCCCEEEEEEeCCCCEEEEEECCEEeeeeeeccCCCceEEEEEe
Q psy2942 13 NDQSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSA 92 (117)
Q Consensus 13 d~~SWg~~~~~g~~~h~~~~~~~~~y~~~~~~g~~~~~gd~IG~~lD~~~gtLsF~~NG~~lG~AF~~l~~~~lyPavs~ 92 (117)
.+.+|.+.. ..+.+++... .++|.. + -....+||+||+.++ .+|+|.|++||+..|+++++++ ++||+.|-+
T Consensus 89 ~~~~Wv~~~--~~v~~ng~~~-~e~~~~--~-l~~l~~Gd~ig~~~~-~~G~l~~~iNg~~~g~~~~~ip-~~LwavvDv 160 (170)
T 2e63_A 89 KGGSWVVSG--CSVLRDGRSV-LEEYGQ--D-LDQLGEGDRVGVERT-VAGELRLWVNGRDCGVAATGLP-PRVWAVVDL 160 (170)
T ss_dssp CSSEEEESS--SEEEESSCEE-EESCSS--C-GGGCCSSCCEEEEEC-TTSCEEEEESSCEEEEEECCCC-SCEEEEEEC
T ss_pred CCCeEEEec--cccccCCccc-chhccc--c-ccccCCCCEEEEEEc-CCcEEEEEECCccceeeEcCCC-CcEEEEEEc
Confidence 457898874 4555555432 234510 0 125568999999998 6799999999999999999887 699999996
Q ss_pred eeCC
Q psy2942 93 VWGH 96 (117)
Q Consensus 93 ~~~~ 96 (117)
++.
T Consensus 161 -yG~ 163 (170)
T 2e63_A 161 -YGK 163 (170)
T ss_dssp -CTT
T ss_pred -cCC
Confidence 454
No 13
>2yue_A Protein neuralized; structure genomics, NEUZ(NHR) domain, structural genomics, NPPSFA; NMR {Drosophila melanogaster}
Probab=97.39 E-value=0.00074 Score=48.15 Aligned_cols=52 Identities=12% Similarity=0.264 Sum_probs=44.1
Q ss_pred cCCCEEEEEEeCCCCEEEEEECCEEeeeeeeccC-CCceEEEEEeeeCCcEEEE
Q psy2942 49 VVPDKFLVILDMDEGTLSFVVDGQYLGVAFRGLK-GRKLYPIVSAVWGHCEITM 101 (117)
Q Consensus 49 ~~gd~IG~~lD~~~gtLsF~~NG~~lG~AF~~l~-~~~lyPavs~~~~~~~v~l 101 (117)
..||++++.+| ..|+|.|.+||+..|+++++++ +++||+.|-+.-.-.+|+|
T Consensus 107 ~~g~~l~f~v~-~~G~l~~~iNg~~~g~~~~~V~~~~pLwavvDvyG~t~~V~i 159 (168)
T 2yue_A 107 EKDNILYYYVN-GAGDVIYGINNEEKGVILTGIDTRSLLWTVIDIYGNCTGIEF 159 (168)
T ss_dssp CSSCEEEEEEC-TTSEEEEEESSCEEEEEEECCCCSSCCEEEEECCSSCSEEEE
T ss_pred cCCCEEEEEEc-CCCEEEEEECCCccEEEEcCCCCCCceEEEEEccCCeEEEEE
Confidence 56899999997 8999999999999999999887 5799999997544456665
No 14
>1wi5_A RRP5 protein homolog; S1 domain, OB-fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.40.4.5
Probab=42.98 E-value=30 Score=22.06 Aligned_cols=34 Identities=18% Similarity=0.209 Sum_probs=26.5
Q ss_pred CCCccCCCEEEEEE---eCCCCEEEEEECCEEeeeee
Q psy2942 45 DETFVVPDKFLVIL---DMDEGTLSFVVDGQYLGVAF 78 (117)
Q Consensus 45 g~~~~~gd~IG~~l---D~~~gtLsF~~NG~~lG~AF 78 (117)
++.++.||+|-|.+ |.++++|.+++....+|.|.
T Consensus 65 ~~~~~~Gd~V~vkV~~vd~~~~~i~Lslk~~~l~~~~ 101 (119)
T 1wi5_A 65 GAKLKVGQYLNCIVEKVKGNGGVVSLSVGHSEVSTAI 101 (119)
T ss_dssp SCCCCTTCEEEEEEEECCTTSCEEEEECCCCCSCCCC
T ss_pred cCEeCCCCEEEEEEEEEeCCCCEEEEEEchhhcccce
Confidence 56789999998843 55578999998777777665
No 15
>3tur_A Mycobacteria tuberculosis LD-transpeptidase type; protein-peptidoglycan complex, peptidoglycan binding protein; HET: 0JC DGL 6CL; 1.72A {Mycobacterium tuberculosis} PDB: 3u1p_A 3u1q_A 3vae_A 3tx4_A 4huc_A
Probab=40.56 E-value=28 Score=26.30 Aligned_cols=28 Identities=21% Similarity=0.425 Sum_probs=24.8
Q ss_pred CccCCCEEEEEEeCCCCEEEEEECCEEe
Q psy2942 47 TFVVPDKFLVILDMDEGTLSFVVDGQYL 74 (117)
Q Consensus 47 ~~~~gd~IG~~lD~~~gtLsF~~NG~~l 74 (117)
.|+.|+..-+.+|..+.+|.++.||+.+
T Consensus 125 ~f~iG~~~~I~Vdls~q~l~vy~~Gk~v 152 (287)
T 3tur_A 125 HFTIGDEVIATADDNTKILTVRVNGEVV 152 (287)
T ss_dssp EEEECCCEEEEEETTTTEEEEEETTEEE
T ss_pred ccccCCeEEEEEEcCCCEEEEEECCEEE
Confidence 5677888899999999999999999864
No 16
>1zps_A PRA-CH, phosphoribosyl-AMP cyclohydrolase; histidine biosynthesis; 1.70A {Methanothermobacterthermautotrophicus} SCOP: b.168.1.1
Probab=34.08 E-value=1.1e+02 Score=20.77 Aligned_cols=60 Identities=17% Similarity=0.226 Sum_probs=39.5
Q ss_pred ceeeEEcCCceEEcCCccCCCcccCCcCCCCCCccCCCEEEEEEeCCCCEEEEEECCEEeeeeeeccCCCceEEEE
Q psy2942 15 QSWGWDLGRNRLYHDSKNNTGLTYPTLLKPDETFVVPDKFLVILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIV 90 (117)
Q Consensus 15 ~SWg~~~~~g~~~h~~~~~~~~~y~~~~~~g~~~~~gd~IG~~lD~~~gtLsF~~NG~~lG~AF~~l~~~~lyPav 90 (117)
..|=|+.++++.||-+... | .++ .++.+.+|+|.-+|-+.+. ..|.|...=..-.+|..+
T Consensus 55 ~~~y~SRSR~~LW~KGetS-----------G-~~Q--~v~~i~~DCD~D~LL~~V~--q~G~aCHtG~~SCF~~~~ 114 (138)
T 1zps_A 55 TAHYWSTSRGKLWLKGESS-----------G-HVQ--RVKDVLVDCDGDAVVLKVE--QEGGACHTGYRSCFYRSI 114 (138)
T ss_dssp BCEEEETTTTEEEETTTTT-----------S-CCE--EEEEEEECTTSSEEEEEEE--ESSCSSTTSBSSSCCEEE
T ss_pred cEEEEcCCCCccccCccCC-----------C-CcE--EEEEEEecCCCCEEEEEEE--ecCCcccCCCCCcCcccc
Confidence 4577888888999988742 2 222 4889999999999988874 334444211123566554
No 17
>1cpn_A Circularly permuted; hydrolase(glucanase); 1.80A {Paenibacillus macerans} SCOP: b.29.1.2 PDB: 1cpm_A
Probab=33.21 E-value=74 Score=22.35 Aligned_cols=37 Identities=16% Similarity=0.173 Sum_probs=26.5
Q ss_pred EEeCCCCEEEEEECCEEeeeeeeccCCCceEEEEEee
Q psy2942 57 ILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAV 93 (117)
Q Consensus 57 ~lD~~~gtLsF~~NG~~lG~AF~~l~~~~lyPavs~~ 93 (117)
.+|.....|.|+++|+.....-..++.+|.|-.+.+.
T Consensus 90 ~veW~p~~I~~yVDG~~~~t~~~~~P~~p~~lilNl~ 126 (208)
T 1cpn_A 90 AFDWQPGYIKWYVDGVLKHTATANIPSTPGKIMMNLW 126 (208)
T ss_dssp EEEEETTEEEEEETTEEEEEECSSCCCSCBEEEEEEE
T ss_pred EEEECCCeEEEEECCEEEEEecCCCCCCCcEEEEEEE
Confidence 3455678999999999876543455667888777763
No 18
>4ewf_A Beta-lactamase; ABA-sandwich, structural genomics, midwest center for struct genomics (MCSG), PSI-biology, cytoplasmic, hydrolase; 2.00A {Sphaerobacter thermophilus}
Probab=32.98 E-value=38 Score=24.35 Aligned_cols=22 Identities=14% Similarity=0.145 Sum_probs=17.6
Q ss_pred CCCEEEEEEeCCCCEEEEEECCE
Q psy2942 50 VPDKFLVILDMDEGTLSFVVDGQ 72 (117)
Q Consensus 50 ~gd~IG~~lD~~~gtLsF~~NG~ 72 (117)
.+-+|||.++.+.|+. |..|+.
T Consensus 24 ~~g~~gv~v~~~~G~~-~~~n~d 45 (275)
T 4ewf_A 24 TGGTVGATIVAPGGET-FRHNGD 45 (275)
T ss_dssp TSCEEEEEEECTTSCE-EEESTT
T ss_pred cCceEEEEEEeCCCCE-EEECCC
Confidence 3568999999888886 788863
No 19
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=32.70 E-value=89 Score=19.49 Aligned_cols=33 Identities=18% Similarity=0.372 Sum_probs=24.4
Q ss_pred CCCccCCCEEEEEEeCC--CC---EEEEEECCEEeeee
Q psy2942 45 DETFVVPDKFLVILDMD--EG---TLSFVVDGQYLGVA 77 (117)
Q Consensus 45 g~~~~~gd~IG~~lD~~--~g---tLsF~~NG~~lG~A 77 (117)
|..+..|+.|-+..+-. .| ++.|++||..+|..
T Consensus 10 ga~v~~g~~v~i~a~A~D~dg~V~kVef~vdg~~vg~d 47 (98)
T 3pe9_A 10 NVVAYGNEFLKITATASDSDGKISRVDFLVDGEVIGSD 47 (98)
T ss_dssp TCCEETTSEEEEEEEECCSSSCEEEEEEEETTEEEEEE
T ss_pred cCEEcCCCEEEEEEEEEeCCCCEEEEEEEECCEEeccc
Confidence 66778888777766543 35 69999999988753
No 20
>4doo_A Chalcone-flavanone isomerase family protein; chalcone-isomerase like fold, fatty-acid binding; HET: DAO; 1.90A {Arabidopsis thaliana}
Probab=32.50 E-value=90 Score=21.87 Aligned_cols=29 Identities=17% Similarity=0.208 Sum_probs=23.6
Q ss_pred CccCCCEEEEEEeCCCCEEEEEECCEEeee
Q psy2942 47 TFVVPDKFLVILDMDEGTLSFVVDGQYLGV 76 (117)
Q Consensus 47 ~~~~gd~IG~~lD~~~gtLsF~~NG~~lG~ 76 (117)
.+.+||+|-...+. .+.+.++.||+.+|.
T Consensus 139 ~~~kGd~i~~~~~p-~~~l~~~~~g~~~g~ 167 (205)
T 4doo_A 139 KIPRNSTIDLTKDP-GHVLSVAIEGNHVGS 167 (205)
T ss_dssp CCCTTCEEEEEEET-TTEEEEEETTEEEEE
T ss_pred CCCCCCEEEEEEcC-CCcEEEEECCeeeEE
Confidence 56799999887774 478899999998874
No 21
>3o5s_A Beta-glucanase; glycosyl hydrolase, beta-jelly roll, hydrolase; HET: B3P; 2.20A {Bacillus subtilis} PDB: 3d6e_A
Probab=32.19 E-value=82 Score=22.69 Aligned_cols=39 Identities=18% Similarity=0.185 Sum_probs=27.4
Q ss_pred EEeCCCCEEEEEECCEEeeeeeeccCCCceEEEEEeeeC
Q psy2942 57 ILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAVWG 95 (117)
Q Consensus 57 ~lD~~~gtLsF~~NG~~lG~AF~~l~~~~lyPavs~~~~ 95 (117)
.+|.....|.||++|+.+...-..++..|.|--+.+..+
T Consensus 172 ~ieW~p~~I~~yVDG~~~~~~~~~~P~~P~~l~lnlw~G 210 (238)
T 3o5s_A 172 AFDWQPNSIKWYVDGQLKHTATNQIPTTPGKIMMNLWNG 210 (238)
T ss_dssp EEEECSSCEEEEETTEEEEEECSSCCCSCBEEEEEEEEB
T ss_pred EEEEECCEEEEEECCEEEEEEcCCCCCCCeEEEEEEEcC
Confidence 456678899999999976643335566778877776444
No 22
>2ayh_A 1,3-1,4-beta-D-glucan 4-glucanohydrolase; hydrolase (glucanase); 1.60A {Hybrid} SCOP: b.29.1.2 PDB: 1byh_A 1glh_A 1u0a_A* 1mac_A 1gbg_A
Probab=32.12 E-value=94 Score=21.53 Aligned_cols=36 Identities=17% Similarity=0.185 Sum_probs=25.6
Q ss_pred EeCCCCEEEEEECCEEeeeeeeccCCCceEEEEEee
Q psy2942 58 LDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAV 93 (117)
Q Consensus 58 lD~~~gtLsF~~NG~~lG~AF~~l~~~~lyPavs~~ 93 (117)
++.....|.|+++|+.....=..++.+|+|-.+.+.
T Consensus 149 ~~W~~~~I~~yvDg~~~~~~~~~~p~~p~~l~lnl~ 184 (214)
T 2ayh_A 149 FDWQPGYIKWYVDGVLKHTATANIPSTPGKIMMNLW 184 (214)
T ss_dssp EEEETTEEEEEETTEEEEEECSSCCCSCBEEEEEEE
T ss_pred EEEeCCEEEEEECCEEEEEcCCCCCCCCcEEEEEEE
Confidence 455678999999999866432344567888777764
No 23
>2k52_A Uncharacterized protein MJ1198; metal-binding, zinc, zinc-finger, structural genomics, PSI-2, protein structure initiative; NMR {Methanocaldococcus jannaschii}
Probab=30.43 E-value=73 Score=18.60 Aligned_cols=23 Identities=17% Similarity=0.303 Sum_probs=18.7
Q ss_pred CccCCCEEEE---EEeCCCCEEEEEE
Q psy2942 47 TFVVPDKFLV---ILDMDEGTLSFVV 69 (117)
Q Consensus 47 ~~~~gd~IG~---~lD~~~gtLsF~~ 69 (117)
.++.||+|-| -+|.++++|.++.
T Consensus 45 ~~~~Gd~V~v~V~~vd~~~~~i~lsl 70 (80)
T 2k52_A 45 NLNVGDEIIVQAIDVRPEKREIDFKY 70 (80)
T ss_dssp GCCTTCEEEEEEEEEETTTTEEEEEE
T ss_pred eeCCCCEEEEEEEEEECCCCEEEEEE
Confidence 5789999988 4577789999886
No 24
>3i4i_A 1,3-1,4-beta-glucanase; beta-sandwich, hydrolase; 1.89A {Uncultured murine large bowel bacteriuorganism_taxid}
Probab=28.41 E-value=99 Score=22.24 Aligned_cols=39 Identities=13% Similarity=0.178 Sum_probs=26.9
Q ss_pred EEeCCCCEEEEEECCEEeeeeeeccCCCceEEEEEeeeC
Q psy2942 57 ILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAVWG 95 (117)
Q Consensus 57 ~lD~~~gtLsF~~NG~~lG~AF~~l~~~~lyPavs~~~~ 95 (117)
.||.....|.||++|+.+...-..++.+|.|--+.+..+
T Consensus 168 ~ieW~p~~I~~yVDG~~~~t~~~~~P~~P~~lilnlw~G 206 (234)
T 3i4i_A 168 AFNWQPNYIAWLVDGEEVYRAYDDIPVHPGKIMLNIWPG 206 (234)
T ss_dssp EEEEETTEEEEEETTEEEEEECSSCCCSCBEEEEEEEEB
T ss_pred EEEEECCEEEEEECCEEEEEEcCCCCCCCcEEEEEEEeC
Confidence 455678899999999976543334556778877776433
No 25
>1ajk_A CPA16M-84, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase; glucanase, circular permutation; HET: EPE; 1.80A {Paenibacillus macerans} SCOP: b.29.1.2
Probab=25.76 E-value=1.4e+02 Score=21.23 Aligned_cols=37 Identities=16% Similarity=0.173 Sum_probs=26.4
Q ss_pred EEeCCCCEEEEEECCEEeeeeeeccCCCceEEEEEee
Q psy2942 57 ILDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAV 93 (117)
Q Consensus 57 ~lD~~~gtLsF~~NG~~lG~AF~~l~~~~lyPavs~~ 93 (117)
.+|.....|.|+++|+.+...-..++.+|.|--+.+.
T Consensus 65 ~ieW~p~~I~wyVDg~~v~t~~~~~P~~P~~iilNlw 101 (214)
T 1ajk_A 65 AFDWQPGYIKWYVDGVLKHTATANIPSTPGKIMMNLW 101 (214)
T ss_dssp EEEEETTEEEEEETTEEEEEECSSCCCSCBEEEEEEE
T ss_pred EEEEcCCeEEEEECCEEEEEECCCCCCCCeEEEEEEE
Confidence 4566788999999999865533355667777776653
No 26
>1ajo_A CPA16M-127, circularly permuted (1-3,1-4)-beta-D-glucan 4- glucanohydrolase CPA16M-127; glucanase, circular permutation; 2.07A {Paenibacillus macerans} SCOP: b.29.1.2
Probab=24.53 E-value=1.3e+02 Score=21.15 Aligned_cols=38 Identities=18% Similarity=0.202 Sum_probs=26.0
Q ss_pred EeCCCCEEEEEECCEEeeeeeeccCCCceEEEEEeeeC
Q psy2942 58 LDMDEGTLSFVVDGQYLGVAFRGLKGRKLYPIVSAVWG 95 (117)
Q Consensus 58 lD~~~gtLsF~~NG~~lG~AF~~l~~~~lyPavs~~~~ 95 (117)
|+.....|.|+++|+.....-.+++.+|.|--+.+..+
T Consensus 23 i~W~~~~I~~~VDg~~~~~~~~~~p~~p~~l~lnlw~g 60 (214)
T 1ajo_A 23 FDWQPGYIKWYVDGVLKHTATANIPSTPGKIMMNLWNG 60 (214)
T ss_dssp EEEETTEEEEEETTEEEEEECSSCCCSCBEEEEEEEEB
T ss_pred EEEeCCeEEEEECCEEEEEEcCCCCCCCeEEEEEEEec
Confidence 55677799999999876544345566777777665433
No 27
>4aeq_A Colicin-M immunity protein; immune system, 3D domain SWAP; 1.89A {Escherichia coli} PDB: 2xgl_A
Probab=22.84 E-value=62 Score=20.73 Aligned_cols=14 Identities=14% Similarity=0.403 Sum_probs=12.5
Q ss_pred EEEEeCCCCEEEEE
Q psy2942 55 LVILDMDEGTLSFV 68 (117)
Q Consensus 55 G~~lD~~~gtLsF~ 68 (117)
-+.+|+.+|+|+|.
T Consensus 83 ~V~vdCk~gti~Ys 96 (98)
T 4aeq_A 83 YGMYHCEEGYVEYA 96 (98)
T ss_dssp EEEEETTTTEEEEE
T ss_pred EEEEEccCCEEEec
Confidence 67899999999986
No 28
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=22.60 E-value=65 Score=19.34 Aligned_cols=21 Identities=29% Similarity=0.680 Sum_probs=16.8
Q ss_pred CCEEEEEECCEEeeeeeeccC
Q psy2942 62 EGTLSFVVDGQYLGVAFRGLK 82 (117)
Q Consensus 62 ~gtLsF~~NG~~lG~AF~~l~ 82 (117)
+|++.|+++|..|.+-..+++
T Consensus 30 agtvtytldgndleiritgvp 50 (85)
T 2kl8_A 30 AGTVTYTLDGNDLEIRITGVP 50 (85)
T ss_dssp TCEEEEEECSSCEEEEEESCC
T ss_pred cceEEEEecCCeeEEEEecCh
Confidence 689999999988877776654
No 29
>3flp_A SAP-like pentraxin; physiological doubly-stacked heptamer, pentraxin fold, cyclic heptamer, invertebrate lectin, sugar binding protein; 2.30A {Limulus polyphemus} PDB: 3flr_A 3flt_A
Probab=20.77 E-value=1.3e+02 Score=20.98 Aligned_cols=24 Identities=13% Similarity=0.235 Sum_probs=20.3
Q ss_pred EEEEEEeCCCCEEEEEECCEEeee
Q psy2942 53 KFLVILDMDEGTLSFVVDGQYLGV 76 (117)
Q Consensus 53 ~IG~~lD~~~gtLsF~~NG~~lG~ 76 (117)
-|.+..|-..|++.+|+||+..+.
T Consensus 101 Hv~~t~d~~~G~~~lYvdG~~~~~ 124 (217)
T 3flp_A 101 HVCHVWSGVDGRMAVYANGSPCGT 124 (217)
T ss_dssp EEEEEEETTTTEEEEEETTEEEEE
T ss_pred EEEEEEECCCCEEEEEECCEEecc
Confidence 577788888999999999998753
No 30
>4dok_A Similarity to chalcone-flavonone isomerase; chalcone-isomerase like protein, chalcone-isomerase like FOL isomerase; 1.70A {Arabidopsis thaliana}
Probab=20.38 E-value=83 Score=22.43 Aligned_cols=31 Identities=13% Similarity=0.252 Sum_probs=23.9
Q ss_pred CCCccCCCEEEEEEeCCCCE--EEEEECCEEee
Q psy2942 45 DETFVVPDKFLVILDMDEGT--LSFVVDGQYLG 75 (117)
Q Consensus 45 g~~~~~gd~IG~~lD~~~gt--LsF~~NG~~lG 75 (117)
+..+.+|++|-.......|+ ++|++||+..|
T Consensus 135 ~~~~~~G~~I~~~~~p~~G~L~i~~s~~G~~~~ 167 (208)
T 4dok_A 135 SKYFKANSVITYHFSAKDGICEIGFETEGKEEE 167 (208)
T ss_dssp TCEECTTCEEEEEECSSSCCEEEEEECTTSCCE
T ss_pred cCCCCCCCEEEEEEeCCCCeEEEEEEeCCEecc
Confidence 35788999988777767785 77999997544
Done!