BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy2947
(441 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 87/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + E
Sbjct: 11 EFKEAFSLFDKDGDGTI-TTKELGTVMRSLGQNPTEAELQDMINE--------------- 54
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 55 ------------------VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 96
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REAN+ + +V YE+FV++ A
Sbjct: 97 NGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQMMTA 147
Score = 28.5 bits (62), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 366 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 421
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 422 SKVRYEDFVKIACAPVPD 439
+ + +F+ + + D
Sbjct: 61 GTIDFPEFLTMMARKMKD 78
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 87/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + E
Sbjct: 12 EFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINE--------------- 55
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 56 ------------------VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 97
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVDQ+ REA++ + +V YE+FV++ A
Sbjct: 98 NGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYEEFVQMMTA 148
Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 366 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 421
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 422 SKVRYEDFVKIACAPVPD 439
+ + +F+ + + D
Sbjct: 62 GTIDFPEFLTMMARKMKD 79
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + E
Sbjct: 11 EFKEAFALFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINE--------------- 54
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D +G + FP+FL +M K +D +E+++AFK D
Sbjct: 55 ------------------VDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDG 96
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ EVD++ REA++ + + YE+FV++ +
Sbjct: 97 NGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVS 147
Score = 28.1 bits (61), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 366 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 421
A+++ +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 1 AQELTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 422 SKVRYEDFVKIAC 434
+ + +F+ +
Sbjct: 61 GTIDFPEFLSLMA 73
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + E
Sbjct: 11 EFKEAFALFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINE--------------- 54
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D +G + FP+FL +M K +D +E+++AFK D
Sbjct: 55 ------------------VDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDG 96
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ EVD++ REA++ + + YE+FV++ +
Sbjct: 97 NGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVS 147
Score = 28.9 bits (63), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 366 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 421
AE + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 422 SKVRYEDFVKIAC 434
+ + +F+ +
Sbjct: 61 GTIDFPEFLSLMA 73
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 86/170 (50%), Gaps = 34/170 (20%)
Query: 267 EFRECFFLFARNGT-IKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHT 325
EF+E F LF ++G T EL +MRSLG +PT AEL+ + E
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINE---------------- 55
Query: 326 HSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKS 385
D +G + FP+FL +M K D +E+ +AF+ D ++
Sbjct: 56 -----------------VDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQN 98
Query: 386 GTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
G + A L+HV+ N GE L+ +EVD++ REA+V + ++ YE+FVK+ A
Sbjct: 99 GFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMA 148
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 88/173 (50%), Gaps = 36/173 (20%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + E
Sbjct: 12 EFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINE--------------- 55
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 56 ------------------VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 97
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACAPV 437
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A +
Sbjct: 98 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAKL 150
Score = 28.5 bits (62), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 366 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 421
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 422 SKVRYEDFVKIACAPVPD 439
+ + +F+ + + D
Sbjct: 62 GTIDFPEFLTMMARKMKD 79
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + E
Sbjct: 12 EFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINE--------------- 55
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 56 ------------------VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 97
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 98 NGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 366 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 421
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 422 SKVRYEDFVKIACAPVPD 439
+ + +F+ + + D
Sbjct: 62 GTIDFPEFLTMMARKMKD 79
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + E
Sbjct: 11 EFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINE--------------- 54
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 55 ------------------VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 96
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 97 NGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 366 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 421
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 422 SKVRYEDFVKIACAPVPD 439
+ + +F+ + + D
Sbjct: 61 GTIDFPEFLTMMARKMKD 78
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + E
Sbjct: 11 EFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINE--------------- 54
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 55 ------------------VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 96
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 97 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 366 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 421
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 422 SKVRYEDFVKIACAPVPD 439
+ + +F+ + + D
Sbjct: 61 GTIDFPEFLTMMARKMKD 78
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 87/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + E
Sbjct: 11 EFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINE--------------- 54
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 55 ------------------VDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDG 96
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA+V + +V YE+FV++ A
Sbjct: 97 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVMMA 147
Score = 28.1 bits (61), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 372 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 431
E +AF D GT+ K L V+ + G+ + E+ + E + N + + +F+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 432 IACAPVPD 439
+ + D
Sbjct: 71 LMARKMKD 78
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + E
Sbjct: 15 EFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINE--------------- 58
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 59 ------------------VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 100
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 101 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 151
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/82 (20%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 362 THSKAEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREAN 417
+++ A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E +
Sbjct: 1 SNAMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD 60
Query: 418 VTMNSKVRYEDFVKIACAPVPD 439
N + + +F+ + + D
Sbjct: 61 ADGNGTIDFPEFLTMMARKMKD 82
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + E
Sbjct: 13 EFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINE--------------- 56
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 57 ------------------VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 98
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 99 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 149
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 364 SKAEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVT 419
S A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E +
Sbjct: 1 SMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 60
Query: 420 MNSKVRYEDFVKIACAPVPD 439
N + + +F+ + + D
Sbjct: 61 GNGTIDFPEFLTMMARKMKD 80
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + E
Sbjct: 17 EFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINE--------------- 60
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 61 ------------------VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 102
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 103 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 153
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 366 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 421
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 7 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 66
Query: 422 SKVRYEDFVKIACAPVPD 439
+ + +F+ + + D
Sbjct: 67 GTIDFPEFLTMMARKMKD 84
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + E
Sbjct: 11 EFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINE--------------- 54
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 55 ------------------VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 96
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 97 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 366 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 421
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 422 SKVRYEDFVKIACAPVPD 439
+ + +F+ + + D
Sbjct: 61 GTIDFPEFLTMMARKMKD 78
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + E
Sbjct: 12 EFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINE--------------- 55
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 56 ------------------VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 97
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 98 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 366 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 421
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 422 SKVRYEDFVKIACAPVPD 439
+ + +F+ + + D
Sbjct: 62 GTIDFPEFLTMMARKMKD 79
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + E
Sbjct: 12 EFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINE--------------- 55
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 56 ------------------VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 97
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 98 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 28.5 bits (62), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 366 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 421
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 422 SKVRYEDFVKIACAPVPD 439
+ + +F+ + + D
Sbjct: 62 GTIDFPEFLTMMARKMKD 79
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + E
Sbjct: 11 EFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINE--------------- 54
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D G + FP+FL +M K D +E+ +AF+ D
Sbjct: 55 ------------------VDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 96
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 97 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 147
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + E
Sbjct: 12 EFKEAFSLFDKDGDGTI-TTKELGTVMRSLGQNPTEAELQDMINE--------------- 55
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 56 ------------------VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 97
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 98 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 28.5 bits (62), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 366 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 421
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 422 SKVRYEDFVKIACAPVPD 439
+ + +F+ + + D
Sbjct: 62 GTIDFPEFLTMMARKMKD 79
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+
Sbjct: 312 EFKEAFSLFDKDGDGTI-TTKELGTVMRSLGQNPTEAELQ-------------------- 350
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 351 -------------DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 397
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 398 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 367 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 426
E+ E +AF D GT+ K L V+ + G+ + E+ + E + N + +
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
Query: 427 EDFVKIACAPVPD 439
+F+ + + D
Sbjct: 367 PEFLTMMARKMKD 379
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+
Sbjct: 312 EFKEAFSLFDKDGDGTI-TTKELGTVMRSLGQNPTEAELQ-------------------- 350
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 351 -------------DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 397
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 398 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 367 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 426
E+ E +AF D GT+ K L V+ + G+ + E+ + E + N + +
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
Query: 427 EDFVKIACAPVPD 439
+F+ + + D
Sbjct: 367 PEFLTMMARKMKD 379
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+
Sbjct: 313 EFKEAFSLFDKDGDGTI-TTKELGTVMRSLGQNPTEAELQ-------------------- 351
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 352 -------------DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 398
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 399 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 449
Score = 29.3 bits (64), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 367 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 426
E+ E +AF D GT+ K L V+ + G+ + E+ + E + N + +
Sbjct: 308 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 367
Query: 427 EDFVKIACAPVPD 439
+F+ + + D
Sbjct: 368 PEFLTMMARKMKD 380
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+
Sbjct: 275 EFKEAFSLFDKDGDGTI-TTKELGTVMRSLGQNPTEAELQ-------------------- 313
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 314 -------------DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 360
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 361 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 411
Score = 29.3 bits (64), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 372 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 431
E +AF D GT+ K L V+ + G+ + E+ + E + N + + +F+
Sbjct: 275 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 334
Query: 432 IACAPVPD 439
+ + D
Sbjct: 335 MMARKMKD 342
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+
Sbjct: 278 EFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQ-------------------- 316
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 317 -------------DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 363
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 364 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 414
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 372 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 431
E +AF D GT+ K L V+ + G+ + E+ + E + N + + +F+
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 337
Query: 432 IACAPVPD 439
+ + D
Sbjct: 338 MMARKMKD 345
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+
Sbjct: 278 EFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQ-------------------- 316
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 317 -------------DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 363
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 364 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 414
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 372 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 431
E +AF D GT+ K L V+ + G+ + E+ + E + N + + +F+
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 337
Query: 432 IACAPVPD 439
+ + D
Sbjct: 338 MMARKMKD 345
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 34/170 (20%)
Query: 267 EFRECFFLFARNGT-IKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHT 325
EF+E F LF ++G T EL +MRSLG +PT AEL+ + E
Sbjct: 12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINE---------------- 55
Query: 326 HSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKS 385
D +G + FP+FL +M K D +E+ +AF+ D ++
Sbjct: 56 -----------------VDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQN 98
Query: 386 GTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
G + A L+HV+ N GE L+ +EVD++ REA+V + ++ Y++FVK+ A
Sbjct: 99 GFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEFVKVMMA 148
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + E
Sbjct: 311 EFKEAFSLFDKDGDGTI-TTKELGTVMRSLGQNPTEAELQDMINE--------------- 354
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D G + FP+FL +M K D +E+ +AF+ D
Sbjct: 355 ------------------VDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 396
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 397 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 447
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+
Sbjct: 312 EFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQ-------------------- 350
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 351 -------------DMINEVDADGNGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDG 397
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 398 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+
Sbjct: 312 EFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQ-------------------- 350
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 351 -------------DMINEVDADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDG 397
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 398 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 85/171 (49%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+
Sbjct: 311 EFKEAFSLFDKDGDGTI-TTKELGTVMRSLGQNPTEAELQ-------------------- 349
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D D G + FP+FL +M K D +E+ +AF+ D
Sbjct: 350 -------------DMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDG 396
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 397 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 447
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 85/171 (49%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+
Sbjct: 312 EFKEAFSLFDKDGDGTI-TTKELGTVMRSLGQNPTEAELQ-------------------- 350
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D D G + FP+FL +M K D +E+ +AF+ D
Sbjct: 351 -------------DMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDG 397
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 398 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 85/171 (49%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+
Sbjct: 311 EFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQ-------------------- 349
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D D G + FP+FL +M K D +E+ +AF+ D
Sbjct: 350 -------------DMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDG 396
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 397 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 447
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 95.9 bits (237), Expect = 4e-20, Method: Composition-based stats.
Identities = 58/171 (33%), Positives = 86/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+
Sbjct: 8 EFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQ-------------------- 46
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 47 -------------DMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDG 93
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA+V + +V YE+FV++ A
Sbjct: 94 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVMMA 144
Score = 29.6 bits (65), Expect = 3.4, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 372 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 431
E +AF D GT+ K L V+ + G+ + E+ + E + N + + +F+
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 67
Query: 432 IACAPVPD 439
+ + D
Sbjct: 68 LMARKMKD 75
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + E
Sbjct: 11 EFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINE--------------- 54
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 55 ------------------VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 96
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV + A
Sbjct: 97 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTA 147
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 366 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 421
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 422 SKVRYEDFVKIACAPVPD 439
+ + +F+ + + D
Sbjct: 61 GTIDFPEFLTMMARKMKD 78
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 95.9 bits (237), Expect = 4e-20, Method: Composition-based stats.
Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+
Sbjct: 9 EFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQ-------------------- 47
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 48 -------------DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 94
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 95 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 145
Score = 29.6 bits (65), Expect = 3.8, Method: Composition-based stats.
Identities = 16/76 (21%), Positives = 33/76 (43%)
Query: 364 SKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSK 423
+ E+ E +AF D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 1 AATEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 60
Query: 424 VRYEDFVKIACAPVPD 439
+ + +F+ + + D
Sbjct: 61 IDFPEFLTMMARKMKD 76
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 95.9 bits (237), Expect = 4e-20, Method: Composition-based stats.
Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+
Sbjct: 8 EFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQ-------------------- 46
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 47 -------------DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 93
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 94 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 144
Score = 29.3 bits (64), Expect = 4.2, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 367 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 426
E+ E +AF D GT+ K L V+ + G+ + E+ + E + N + +
Sbjct: 3 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 62
Query: 427 EDFVKIACAPVPD 439
+F+ + + D
Sbjct: 63 PEFLTMMARKMKD 75
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 95.9 bits (237), Expect = 4e-20, Method: Composition-based stats.
Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+
Sbjct: 7 EFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQ-------------------- 45
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 46 -------------DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 92
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 93 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 143
Score = 29.3 bits (64), Expect = 4.2, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 367 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 426
E+ E +AF D GT+ K L V+ + G+ + E+ + E + N + +
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Query: 427 EDFVKIACAPVPD 439
+F+ + + D
Sbjct: 62 PEFLTMMARKMKD 74
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 95.9 bits (237), Expect = 4e-20, Method: Composition-based stats.
Identities = 57/171 (33%), Positives = 86/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+
Sbjct: 9 EFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQ-------------------- 47
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 48 -------------DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 94
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 95 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 145
Score = 29.3 bits (64), Expect = 4.2, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 367 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 426
E+ E +AF D GT+ K L V+ + G+ + E+ + E + N + +
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Query: 427 EDFVKIACAPVPD 439
+F+ + + D
Sbjct: 64 PEFLTMMARKMKD 76
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + E
Sbjct: 11 EFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINE--------------- 54
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D +G + FP+FL +M K D +++ +AF+ D
Sbjct: 55 ------------------VDADGNGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDG 96
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA+V + +V YE+FV++ A
Sbjct: 97 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVQVMMA 147
Score = 28.1 bits (61), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 372 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 431
E +AF D GT+ K L V+ + G+ + E+ + E + N + + +F+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 432 IACAPVPD 439
+ + D
Sbjct: 71 LMARKMKD 78
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 85/171 (49%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+
Sbjct: 303 EFKEAFSLFDKDGDGTI-TTKELGTVMRSLGQNPTEAELQ-------------------- 341
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D D G + FP+FL +M K D +E+ +AF+ D
Sbjct: 342 -------------DMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDG 388
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++ A
Sbjct: 389 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 439
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 94.7 bits (234), Expect = 8e-20, Method: Composition-based stats.
Identities = 56/168 (33%), Positives = 85/168 (50%), Gaps = 36/168 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+
Sbjct: 9 EFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQ-------------------- 47
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 48 -------------DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 94
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKI 432
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++
Sbjct: 95 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 142
Score = 29.3 bits (64), Expect = 4.2, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 367 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 426
E+ E +AF D GT+ K L V+ + G+ + E+ + E + N + +
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Query: 427 EDFVKIACAPVPD 439
+F+ + + D
Sbjct: 64 PEFLTMMARKMKD 76
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 94.7 bits (234), Expect = 8e-20, Method: Composition-based stats.
Identities = 56/168 (33%), Positives = 85/168 (50%), Gaps = 36/168 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+
Sbjct: 10 EFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQ-------------------- 48
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 49 -------------DMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 95
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKI 432
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV++
Sbjct: 96 NGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM 143
Score = 29.3 bits (64), Expect = 4.2, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 367 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 426
E+ E +AF D GT+ K L V+ + G+ + E+ + E + N + +
Sbjct: 5 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 64
Query: 427 EDFVKIACAPVPD 439
+F+ + + D
Sbjct: 65 PEFLTMMARKMKD 77
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + E
Sbjct: 11 EFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINE--------------- 54
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 55 ------------------VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 96
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV + +
Sbjct: 97 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 147
Score = 28.5 bits (62), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 366 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 421
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 422 SKVRYEDFVKIACAPVPD 439
+ + +F+ + + D
Sbjct: 61 GTIDFPEFLTMMARKMKD 78
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 86/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + E
Sbjct: 12 EFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINE--------------- 55
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 56 ------------------VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 97
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV + +
Sbjct: 98 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 148
Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 366 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 421
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 422 SKVRYEDFVKIACAPVPD 439
+ + +F+ + + D
Sbjct: 62 GTIDFPEFLTMMARKMKD 79
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 85/168 (50%), Gaps = 36/168 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + E
Sbjct: 12 EFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINE--------------- 55
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 56 ------------------VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 97
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKI 432
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV +
Sbjct: 98 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 145
Score = 28.5 bits (62), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 366 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 421
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 422 SKVRYEDFVKIACAPVPD 439
+ + +F+ + + D
Sbjct: 62 GTIDFPEFLTMMARKMKD 79
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 94.0 bits (232), Expect = 1e-19, Method: Composition-based stats.
Identities = 58/171 (33%), Positives = 86/171 (50%), Gaps = 37/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+
Sbjct: 7 EFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQ-------------------- 45
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 46 -------------DMINEVDADGNGTIDFPEFLTMMARKMKDTD-SEEIREAFRVFDKDG 91
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ REAN+ + +V YE+FV++ A
Sbjct: 92 NGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQMMTA 142
Score = 29.3 bits (64), Expect = 4.2, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 367 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 426
E+ E +AF D GT+ K L V+ + G+ + E+ + E + N + +
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Query: 427 EDFVKIACAPVPD 439
+F+ + + D
Sbjct: 62 PEFLTMMARKMKD 74
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 86/171 (50%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + E
Sbjct: 12 EFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINE--------------- 55
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D +G + FP+FL +M K D +E+ +AF+ D
Sbjct: 56 ------------------VDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDG 97
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV+ N GE L+ +EVD++ RE+++ + +V YE+FV + +
Sbjct: 98 NGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYEEFVTMMTS 148
Score = 28.9 bits (63), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 366 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 421
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 422 SKVRYEDFVKIACAPVPD 439
+ + +F+ + + D
Sbjct: 62 GTIDFPEFLTMMARKMKD 79
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 90.9 bits (224), Expect = 1e-18, Method: Composition-based stats.
Identities = 56/168 (33%), Positives = 85/168 (50%), Gaps = 38/168 (22%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL +MRSLG +PT AEL+
Sbjct: 11 EFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQ-------------------- 49
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D D +G + FP+FL +M K +D +E+ +AF+ D
Sbjct: 50 -------------DMINEVDADGNGTIDFPEFLTMMA--RKMKDSEEEIREAFRVFDKDG 94
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKI 432
+G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV +
Sbjct: 95 NGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 142
Score = 29.3 bits (64), Expect = 4.2, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 367 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 426
E+ E +AF D GT+ K L V+ + G+ + E+ + E + N + +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 427 EDFVKIACAPVPD 439
+F+ + + D
Sbjct: 66 PEFLTMMARKMKD 78
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 82/167 (49%), Gaps = 34/167 (20%)
Query: 267 EFRECFFLFARNGT-IKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHT 325
EF+E F LF ++G T EL +MRSLG +PT AEL+ ++E
Sbjct: 11 EFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSE---------------- 54
Query: 326 HSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKS 385
D +G + FP+FL +M K D +E+ +AF+ D +
Sbjct: 55 -----------------IDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGN 97
Query: 386 GTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKI 432
G V A L+HV+ GE LS +EVD++ R A+ + +V YE+FV++
Sbjct: 98 GFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFVRV 144
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 81/171 (47%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL + RSLG +PT AEL+ + E
Sbjct: 12 EFKEAFSLFDKDGDGTITTK-ELGTVXRSLGQNPTEAELQDXINE--------------- 55
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D +G + FP+FL K D +E+ +AF+ D
Sbjct: 56 ------------------VDADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDG 97
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV N GE L+ +EVDQ REA++ + +V YE+FV+ A
Sbjct: 98 NGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEEFVQXXTA 148
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 83/170 (48%), Gaps = 34/170 (20%)
Query: 267 EFRECFFLFARNGTIK-TLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHT 325
EF+E F LF ++G T +L +MRSLG +PT AEL+ + E G
Sbjct: 312 EFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVG-------------- 357
Query: 326 HSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKS 385
AD +G + FP FL +M K D +E+ +AF+ +
Sbjct: 358 -----------------ADG--NGTIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGN 398
Query: 386 GTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
G + A L+HV+ N GE L+ +EVD++ REA + + +V YE FV++ A
Sbjct: 399 GYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDGQVNYEQFVQMMTA 448
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 88/168 (52%), Gaps = 34/168 (20%)
Query: 266 LEFRECFFLFARNGT-IKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
++F+E F LF ++G T++EL+ ++RSL +PT EL+ ++E
Sbjct: 10 VDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISE--------------- 54
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D +G + F +FL +M K D +E+ +AFK D +
Sbjct: 55 ------------------VDADGNGTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQ 96
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKI 432
+G + A L+HV++N GE L+ +EV+Q+ +EA++ + +V YE+FVK+
Sbjct: 97 NGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKM 144
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 81/171 (47%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL + RSLG +PT AEL+ + E
Sbjct: 11 EFKEAFSLFDKDGDGTITTK-ELGTVXRSLGQNPTEAELQDXINE--------------- 54
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D +G + FP+FL K D +E+ +AF+ D
Sbjct: 55 ------------------VDADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDG 96
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV N GE L+ +EVD+ REA++ + +V YE+FV+ A
Sbjct: 97 NGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFVQXXTA 147
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 81/171 (47%), Gaps = 36/171 (21%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++G TI T EL + RSLG +PT AEL+
Sbjct: 11 EFKEAFSLFDKDGDGTITTK-ELGTVXRSLGCNPTEAELQ-------------------- 49
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D D +G ++FP+FL K D +E+ +AF+ D
Sbjct: 50 -------------DXINEVDADGNGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDG 96
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+G + A L+HV N GE L+ +EVD+ REA++ + +V YE+FV+ A
Sbjct: 97 NGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEFVQXXTA 147
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 34/165 (20%)
Query: 267 EFRECFFLFARNGTIK-TLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHT 325
EF++ F F + GT K EL +MR+LG +PT AEL+ +AE
Sbjct: 11 EFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAE---------------- 54
Query: 326 HSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKS 385
A+ +G+L+F +F +M + D +E+ +AFK D
Sbjct: 55 -----------------AENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGD 97
Query: 386 GTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFV 430
G + L+ V++N GE ++ +E+D++ REA+ + + YE+FV
Sbjct: 98 GFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFV 142
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 74/151 (49%), Gaps = 36/151 (23%)
Query: 267 EFRECFFLFAR--NGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF + NG+I + EL+ +MRSLG+SP+ AE+
Sbjct: 12 EFKEAFALFDKDNNGSISS-SELATVMRSLGLSPSEAEVN-------------------- 50
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D+ E+ D + ++ F +FL +M K+ D +E+++AFK D
Sbjct: 51 ------DLMNEI-------DVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNG 97
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFRE 415
G + A LKHVL + GE L+ EVD + RE
Sbjct: 98 DGLISAAELKHVLTSIGEKLTDAEVDDMLRE 128
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 74.7 bits (182), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/153 (31%), Positives = 73/153 (47%), Gaps = 36/153 (23%)
Query: 267 EFRECFFLFAR--NGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF + NG+I + EL+ +MRSLG+SP+ AE+ + E
Sbjct: 11 EFKEAFALFDKDNNGSISS-SELATVMRSLGLSPSEAEVNDLMNE--------------- 54
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D + ++ F +FL +M K+ D +E+++AFK D
Sbjct: 55 ------------------IDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNG 96
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREAN 417
G + A LKHVL + GE L+ EVD + RE +
Sbjct: 97 DGLISAAELKHVLTSIGEKLTDAEVDDMLREVS 129
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 70/151 (46%), Gaps = 36/151 (23%)
Query: 267 EFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF ++ G+I + EL+ +MRSLG+SP+ AE
Sbjct: 12 EFKEAFALFDKDNSGSI-SASELATVMRSLGLSPSEAE---------------------- 48
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
V D D + + F +FL +M K D +E+++AFK D
Sbjct: 49 -----------VADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNG 97
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFRE 415
G + A LKHVL + GE L+ EVD++ RE
Sbjct: 98 DGLISAAELKHVLTSIGEKLTDAEVDEMLRE 128
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 366 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 421
++++ +E + FK A D SG++ A L V+ + G S EV + E +V N
Sbjct: 2 SQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGN 61
Query: 422 SKVRYEDFVKI 432
+ + +F+ +
Sbjct: 62 HAIEFSEFLAL 72
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 71.2 bits (173), Expect = 1e-12, Method: Composition-based stats.
Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 44/172 (25%)
Query: 267 EFRECFFLFARNGTIKTLD--ELSVIMRSLGMSPTIAELKKYLAE----KGGKLSFPDFL 320
E RE F LF +GT T+D EL V MR+LG P E+KK ++E GK++F DFL
Sbjct: 7 EIREAFDLFDADGT-GTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFL 65
Query: 321 KVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAA 380
VM +D +E++ AFK D ++GK+SF
Sbjct: 66 TVMTQKMSEKDTKEEILKAFKLFDDDETGKISF--------------------------- 98
Query: 381 DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKI 432
K LK V GE L+ +E+ ++ EA+ + +V ++F++I
Sbjct: 99 ----------KNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRI 140
Score = 29.6 bits (65), Expect = 3.4, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 32/66 (48%)
Query: 367 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 426
E+ +E+ +AF D +GT+ K LK + G +E+ ++ E + K+ +
Sbjct: 2 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 61
Query: 427 EDFVKI 432
DF+ +
Sbjct: 62 GDFLTV 67
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 77/168 (45%), Gaps = 36/168 (21%)
Query: 267 EFRECFFLFARNGTIKTLD--ELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
E RE F LF +G+ T+D EL V MR+LG P E+KK ++E
Sbjct: 29 EIREAFDLFDTDGS-GTIDAKELKVAMRALGFEPKKEEIKKMISE--------------- 72
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D SG + F +FL +M D +E++ AF+ D
Sbjct: 73 ------------------IDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDN 114
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKI 432
SGT+ K L+ V GE L+ +E+ ++ EA+ ++++ ++F++I
Sbjct: 115 SGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRI 162
Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%)
Query: 367 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 426
E+ +E+ +AF DT SGT+ AK LK + G +E+ ++ E + + + +
Sbjct: 24 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDF 83
Query: 427 EDFVKIACAPV 437
E+F+ + A +
Sbjct: 84 EEFLTMMTAKM 94
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 65.9 bits (159), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 69/146 (47%), Gaps = 36/146 (24%)
Query: 267 EFRECFFLFAR--NGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F LF + NG+I + EL+ +MRSLG+SP+ AE+ + E
Sbjct: 11 EFKEAFALFDKDNNGSISS-SELATVMRSLGLSPSEAEVNDLMNE--------------- 54
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D + ++ F +FL +M K+ D +E+++AFK D
Sbjct: 55 ------------------IDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNG 96
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVD 410
G + A LKHVL + GE L+ E++
Sbjct: 97 DGLISAAELKHVLTSIGEKLTDAELE 122
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 64.3 bits (155), Expect = 1e-10, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 85/173 (49%), Gaps = 36/173 (20%)
Query: 267 EFRECFFLFARNGTIK-TLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHT 325
+ +ECF +F ++ K +++EL +RSLG +PT AEL G+L+ +F
Sbjct: 6 QIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTI----KGQLNAKEF------ 55
Query: 326 HSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKS 385
D+ FK + K + T ++ KE++DAF+A D +
Sbjct: 56 -----DLA-----TFKTV------------YRKPIKTPTEQS---KEMLDAFRALDKEGN 90
Query: 386 GTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACAPVP 438
GT+ L+ +L+N G+ L+S EV+++ +E +V+ + + YE FV + P
Sbjct: 91 GTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVTGYP 143
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 35/170 (20%)
Query: 267 EFRECFFLFARNGTIKTL-DELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHT 325
EF+E F LF R G K L + +MR+LG +PT AE+ K L
Sbjct: 10 EFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGN---------------- 53
Query: 326 HSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIP--KEVVDAFKAADTT 383
PK +D L F FL +M T +K +D ++ V+ + D
Sbjct: 54 -------PK--------SDEMNLKTLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKE 98
Query: 384 KSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIA 433
+GTV ++HVLV GE ++ +EV+Q+ + N + YE+ V++
Sbjct: 99 GNGTVMGAEIRHVLVTLGEKMTEEEVEQLVA-GHEDSNGCINYEELVRMV 147
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 77/172 (44%), Gaps = 44/172 (25%)
Query: 267 EFRECFFLFARNGTIKTLD--ELSVIMRSLGMSPTIAELKKYLAE----KGGKLSFPDFL 320
E RE F LF +G+ T+D EL V MR+LG P E+KK +A+ G + F +FL
Sbjct: 9 EIREAFDLFDTDGS-GTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFL 67
Query: 321 KVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAA 380
++M D +E++ AF+ D ++GK+SF
Sbjct: 68 QMMTAKMGERDSREEIMKAFRLFDDDETGKISF--------------------------- 100
Query: 381 DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKI 432
K LK V GE ++ +E+ ++ EA+ + +V E+F +I
Sbjct: 101 ----------KNLKRVAKELGENMTDEELQEMIDEADRDGDGEVNEEEFFRI 142
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 38/71 (53%)
Query: 367 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 426
E+ +E+ +AF DT SGT+ AK LK + G +E+ ++ + + + + +
Sbjct: 4 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDF 63
Query: 427 EDFVKIACAPV 437
E+F+++ A +
Sbjct: 64 EEFLQMMTAKM 74
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 77/172 (44%), Gaps = 35/172 (20%)
Query: 267 EFRECFFLFARNGTIKTL-DELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHT 325
EF+E F LF R G K L + +MR+LG +PT AE+ K L
Sbjct: 8 EFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGN---------------- 51
Query: 326 HSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIP--KEVVDAFKAADTT 383
PK +D L F FL +M T +K +D ++ V+ + D
Sbjct: 52 -------PK--------SDEMNLKTLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKE 96
Query: 384 KSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+GTV ++HVLV GE ++ +EV+Q+ + N + YE+ V++ +
Sbjct: 97 GNGTVMGAEIRHVLVTLGEKMTEEEVEQLVA-GHEDSNGCINYEELVRMVLS 147
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 62.0 bits (149), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 45/68 (66%)
Query: 365 KAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKV 424
K +D +E+++AFK D +G + A L+HV+ N GE L+ EVD++ REA++ + +
Sbjct: 2 KEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHI 61
Query: 425 RYEDFVKI 432
YE+FV++
Sbjct: 62 NYEEFVRM 69
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 62.0 bits (149), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 46/68 (67%)
Query: 368 DIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYE 427
D +E+ +AF+ D ++G + A L+HV+ N GE L+ +EVD++ REA+V + ++ YE
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 428 DFVKIACA 435
+FVK+ A
Sbjct: 61 EFVKVMMA 68
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 61.2 bits (147), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 46/71 (64%)
Query: 365 KAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKV 424
K D +E+ +AF+ D +G + A L+HV+ N GE L+ +EVD++ REA++ + +V
Sbjct: 23 KDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 82
Query: 425 RYEDFVKIACA 435
YE+FV++ A
Sbjct: 83 NYEEFVQMMTA 93
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 61.2 bits (147), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 45/68 (66%)
Query: 368 DIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYE 427
D +E+ +AF+ D +G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE
Sbjct: 4 DSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 63
Query: 428 DFVKIACA 435
DFV++ A
Sbjct: 64 DFVQMMTA 71
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 61.2 bits (147), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 46/65 (70%)
Query: 368 DIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYE 427
D +E+ +AFK D ++G + A L+HV++N GE L+ +EV+Q+ +EA++ + +V YE
Sbjct: 6 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 65
Query: 428 DFVKI 432
+FVK+
Sbjct: 66 EFVKM 70
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 61.2 bits (147), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 46/65 (70%)
Query: 368 DIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYE 427
D +E+ +AFK D ++G + A L+HV++N GE L+ +EV+Q+ +EA++ + +V YE
Sbjct: 1 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Query: 428 DFVKI 432
+FVK+
Sbjct: 61 EFVKM 65
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 46/71 (64%)
Query: 365 KAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKV 424
K D +E+ +AF+ D +G + A L+HV+ N GE L+ +EVD++ REA++ + +V
Sbjct: 3 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 62
Query: 425 RYEDFVKIACA 435
YE+FV++ A
Sbjct: 63 NYEEFVQMMTA 73
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/71 (38%), Positives = 46/71 (64%)
Query: 365 KAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKV 424
K D +E+ +AF+ D +G + A L+HV+ N GE L+ +EVD++ REA++ + +V
Sbjct: 2 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 61
Query: 425 RYEDFVKIACA 435
YE+FV++ A
Sbjct: 62 NYEEFVQMMTA 72
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 60.1 bits (144), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 45/68 (66%)
Query: 368 DIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYE 427
D +E+ +AF+ D +G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 428 DFVKIACA 435
+FV++ A
Sbjct: 62 EFVQMMTA 69
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 60.1 bits (144), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 45/68 (66%)
Query: 368 DIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYE 427
D +E+ +AF+ D +G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE
Sbjct: 3 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 62
Query: 428 DFVKIACA 435
+FV++ A
Sbjct: 63 EFVQMMTA 70
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 58.9 bits (141), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 44/65 (67%)
Query: 368 DIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYE 427
D +E+ +AF+ D +G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 428 DFVKI 432
+FV++
Sbjct: 62 EFVQM 66
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 58.9 bits (141), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 44/65 (67%)
Query: 371 KEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFV 430
+E+ +AF+ D +G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+FV
Sbjct: 2 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 61
Query: 431 KIACA 435
++ A
Sbjct: 62 QMMTA 66
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 58.5 bits (140), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 7/81 (8%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGGKLSFPDFL 320
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G + FP+FL
Sbjct: 11 EFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 321 KVMHTHSKAEDIPKEVVDAFK 341
+M K D +E+ +AF+
Sbjct: 70 TMMARKMKDTDSEEEIREAFR 90
Score = 29.3 bits (64), Expect = 4.9, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 367 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 426
E+ E +AF D GT+ K L V+ + G+ + E+ + E + N + +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 427 EDFVKIACAPVPD 439
+F+ + + D
Sbjct: 66 PEFLTMMARKMKD 78
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 56.6 bits (135), Expect = 2e-08, Method: Composition-based stats.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 43/172 (25%)
Query: 267 EFRECFFLFARNGTIK-TLDELSVIMRSLGMSPTIAELKKYLAE------KGGKLSFPDF 319
+F+E F LF R G K TL ++ I+R+LG +PT AE+ K L K++F +F
Sbjct: 5 DFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKITFEEF 64
Query: 320 LKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKA 379
L ++ AA+ G +F DF V+ +
Sbjct: 65 LPMLQA----------------AANNKDQG--TFEDF-----------------VEGLRV 89
Query: 380 ADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 431
D +GTV L+HVL GE ++ +EV+++ + N + YE FVK
Sbjct: 90 FDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK-GQEDSNGCINYEAFVK 140
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 35/168 (20%)
Query: 267 EFRECFFLFARNGTIKTL-DELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHT 325
EF+E F LF R G K L + +MR+LG +PT AE+ K L
Sbjct: 11 EFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGN---------------- 54
Query: 326 HSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSK--AEDIPKEVVDAFKAADTT 383
PK +D KS ++ F FL ++ +K + ++ ++ F+ D
Sbjct: 55 -------PK--------SDELKSRRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKE 99
Query: 384 KSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 431
+G V L+HVL GE ++ +EV+ + + N + YE F+K
Sbjct: 100 GNGKVMGAELRHVLTTLGEKMTEEEVETVLA-GHEDSNGCINYEAFLK 146
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 52/102 (50%), Gaps = 3/102 (2%)
Query: 62 HAFLLS-LSYTPIGRRIFKCDTVEVLSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQNAS 120
HA LS L I IFK D + L L NSLT LP +I L+NLRVL L+ N L S
Sbjct: 227 HALDLSNLQIFNISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRL--TS 284
Query: 121 IPFTLTFCKNLTHLYLDNNLLDALPGFLLSMPQLDTVYRHGN 162
+P L C L + Y +N++ LP ++ L + GN
Sbjct: 285 LPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGN 326
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 2/99 (2%)
Query: 44 SLEVGGICSHIWIPQYFSHAFLLSLSYTPIGRRIFKCDTVEVLSLKSNSLTSLPPDIGRL 103
+L++ I ++I+ + + +L S T + I + VL L N LTSLP ++G
Sbjct: 233 NLQIFNISANIFKYDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLTSLPAELGSC 292
Query: 104 TNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLLD 142
L+ DN + ++P+ NL L ++ N L+
Sbjct: 293 FQLKYFYFFDNMV--TTLPWEFGNLCNLQFLGVEGNPLE 329
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 338 DAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPK----EVVDAFKAADTTKSGTVPAKYL 393
D F T K G+ S P F + + + D + + ++AFK D G + L
Sbjct: 48 DVFAVGGTHKMGEKSLP-FEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAEL 106
Query: 394 KHVLVNWGEGLSSKEVDQIFREANVT--MNSKVRYEDFV-KIACAPVPD 439
+HVL GE LS ++VD+I + ++ + V+YEDFV K+ P PD
Sbjct: 107 RHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPYPD 155
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 338 DAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPK----EVVDAFKAADTTKSGTVPAKYL 393
D F T K G+ S P F + + + D + + ++AFK D G + L
Sbjct: 48 DVFAVGGTHKMGEKSLP-FEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAEL 106
Query: 394 KHVLVNWGEGLSSKEVDQIFREANV--TMNSKVRYEDFV-KIACAPVPD 439
+HVL GE LS ++VD+I + ++ + V+YEDFV K+ P PD
Sbjct: 107 RHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPYPD 155
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 53.1 bits (126), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 333 PKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSK---AEDIPKEVVDAFKAADTTKSGTVP 389
P + F AD T +GK+ FP+FL +M K +EDI ++ AF+ D +G +P
Sbjct: 41 PAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQ---AFRTFDPEGTGYIP 97
Query: 390 AKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFV 430
L+ L+N G+ L E + F T ++RY++F+
Sbjct: 98 KAALQDALLNLGDRLKPHEFAE-FLGITETEKGQIRYDNFI 137
Score = 37.0 bits (84), Expect = 0.022, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 38/67 (56%)
Query: 366 AEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVR 425
+D E +AF+ D+ ++G + + L+ VL +G + +++F EA+ T N K++
Sbjct: 1 GDDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQ 60
Query: 426 YEDFVKI 432
+ +F+ +
Sbjct: 61 FPEFLSM 67
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 76/169 (44%), Gaps = 37/169 (21%)
Query: 268 FRECFFLFARNGTIKT-LDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHTH 326
+++ F LF R+GT + + ++R+ G +PT+AE+ + + ++ FL+V++
Sbjct: 7 YKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVDMEQFLQVLN-R 65
Query: 327 SKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSG 386
D+P + P+E V F+ D +G
Sbjct: 66 PNGFDMPGD----------------------------------PEEFVKGFQVFDKDATG 91
Query: 387 TVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
+ L++VL + GE LS++E+D++ + V + V Y DFV++ A
Sbjct: 92 MIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQMILA 139
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%)
Query: 344 DTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEG 403
D +GK +F DFL V +D +E++ AFK D ++G + K LK V GE
Sbjct: 77 DKEGTGKXNFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGEN 136
Query: 404 LSSKEVDQIFREANVTMNSKVRYEDFVKI 432
L+ +E+ + EA+ + +V ++F++I
Sbjct: 137 LTDEELQEXIDEADRDGDGEVSEQEFLRI 165
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 338 DAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPK----EVVDAFKAADTTKSGTVPAKYL 393
D F T K G+ S P F + + + D + + ++AFK D G + L
Sbjct: 48 DVFAVGGTHKMGEKSLP-FEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAEL 106
Query: 394 KHVLVNWGEGLSSKEVDQIFREANVT--MNSKVRYEDFV-KIACAPVPD 439
+HVL GE LS +EVD+I ++ + V+YE+FV K+ P PD
Sbjct: 107 RHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFVKKVMAGPYPD 155
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 338 DAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPK----EVVDAFKAADTTKSGTVPAKYL 393
D F T K G+ S P F + + + D + + ++AFK D G + L
Sbjct: 49 DVFAVGGTHKMGEKSLP-FEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAEL 107
Query: 394 KHVLVNWGEGLSSKEVDQIFREANVT--MNSKVRYEDFV-KIACAPVPD 439
+HVL GE LS +EVD+I ++ + V+YE+FV K+ P PD
Sbjct: 108 RHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFVKKVMTGPYPD 156
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 52.0 bits (123), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGGKLSFPDFL 320
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G + FP+FL
Sbjct: 11 EFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 321 KVMHTHSKAED 331
+M K D
Sbjct: 70 TMMARKMKDTD 80
Score = 29.3 bits (64), Expect = 4.8, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 367 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 426
E+ E +AF D GT+ K L V+ + G+ + E+ + E + N + +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 427 EDFVKIACAPVPD 439
+F+ + + D
Sbjct: 66 PEFLTMMARKMKD 78
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 338 DAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPK----EVVDAFKAADTTKSGTVPAKYL 393
D F T K G+ S P F + + + D + + ++AFK D G + L
Sbjct: 48 DVFAVGGTHKMGEKSLP-FEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAEL 106
Query: 394 KHVLVNWGEGLSSKEVDQIFREANVT--MNSKVRYEDFV-KIACAPVPD 439
+HVL GE LS +EVD+I ++ + V+YE+FV K+ P PD
Sbjct: 107 RHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEEFVKKVMTGPYPD 155
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 43/177 (24%)
Query: 262 KTPYLEFRECFFLFARNGTIK-TLDELSVIMRSLGMSPTIAELKKYLAE------KGGKL 314
K +F+E F LF R G K T ++ I R+LG +PT AE+ K L +
Sbjct: 2 KAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAI 61
Query: 315 SFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVV 374
+F +FL ++ AA+ G +F DF V
Sbjct: 62 TFEEFLPMLQA----------------AANNKDQG--TFEDF-----------------V 86
Query: 375 DAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 431
+ + D +GTV L+HVL GE ++ +EV+++ + N + YE FVK
Sbjct: 87 EGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK-GQEDSNGCINYEAFVK 142
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 43/177 (24%)
Query: 262 KTPYLEFRECFFLFARNGTIK-TLDELSVIMRSLGMSPTIAELKKYLAE------KGGKL 314
K +F+E F LF R G K T ++ I R+LG +PT AE+ K L +
Sbjct: 4 KAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAI 63
Query: 315 SFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVV 374
+F +FL ++ AA+ G +F DF V
Sbjct: 64 TFEEFLPMLQA----------------AANNKDQG--TFEDF-----------------V 88
Query: 375 DAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 431
+ + D +GTV L+HVL GE ++ +EV+++ + N + YE FVK
Sbjct: 89 EGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK-GQEDSNGCINYEAFVK 144
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 338 DAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPK----EVVDAFKAADTTKSGTVPAKYL 393
D F T K G+ S P F + + + D + + ++AFK D G + L
Sbjct: 46 DVFAVGGTHKMGEKSLP-FEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAEL 104
Query: 394 KHVLVNWGEGLSSKEVDQIFREANVT--MNSKVRYEDFV-KIACAPVP 438
+HVL GE LS ++VD+I + ++ + V+YEDFV K+ P P
Sbjct: 105 RHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPYP 152
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 338 DAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPK----EVVDAFKAADTTKSGTVPAKYL 393
D F T K G+ S P F + + + D + + ++AFK D G + L
Sbjct: 45 DVFAVGGTHKMGEKSLP-FEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAEL 103
Query: 394 KHVLVNWGEGLSSKEVDQIFREANVT--MNSKVRYEDFV-KIACAPVP 438
+HVL GE LS ++VD+I + ++ + V+YEDFV K+ P P
Sbjct: 104 RHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPYP 151
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 338 DAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPK----EVVDAFKAADTTKSGTVPAKYL 393
D F T K G+ S P F + + + D + + ++AFK D G + L
Sbjct: 48 DVFAVGGTHKMGEKSLP-FEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAEL 106
Query: 394 KHVLVNWGEGLSSKEVDQIFREANVT--MNSKVRYEDFV-KIACAPVP 438
+HVL GE LS ++VD+I + ++ + V+YEDFV K+ P P
Sbjct: 107 RHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPYP 154
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 51.2 bits (121), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 47/82 (57%)
Query: 351 LSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVD 410
++F DFL VM +D +E++ AFK D ++G + K LK V GE L+ +E+
Sbjct: 1 MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQ 60
Query: 411 QIFREANVTMNSKVRYEDFVKI 432
++ EA+ + +V ++F++I
Sbjct: 61 EMIDEADRDGDGEVSEQEFLRI 82
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 51.2 bits (121), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 7/63 (11%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGGKLSFPDFL 320
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G + FP+FL
Sbjct: 11 EFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 321 KVM 323
+M
Sbjct: 70 TMM 72
Score = 28.5 bits (62), Expect = 7.1, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 30/66 (45%)
Query: 367 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 426
E+ E +AF D GT+ K L V+ + G+ + E+ + E + N + +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 427 EDFVKI 432
+F+ +
Sbjct: 66 PEFLTM 71
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 51.2 bits (121), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 7/63 (11%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGGKLSFPDFL 320
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G + FP+FL
Sbjct: 11 EFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 321 KVM 323
+M
Sbjct: 70 TMM 72
Score = 28.5 bits (62), Expect = 6.9, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 30/66 (45%)
Query: 367 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 426
E+ E +AF D GT+ K L V+ + G+ + E+ + E + N + +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 427 EDFVKI 432
+F+ +
Sbjct: 66 PEFLTM 71
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 42/172 (24%)
Query: 267 EFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVM 323
EF+ F +F A +G+I T EL +MR LG +PT EL++ + E
Sbjct: 19 EFKAAFDIFVLGAEDGSISTK-ELGKVMRMLGQNPTPEELQEMIDE-------------- 63
Query: 324 HTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAED----IPKEVVDAFKA 379
D SG + F +FL VM S +D +E+ D F+
Sbjct: 64 -------------------VDEDGSGTVDFDEFL-VMMVRSMKDDSKGKSEEELSDLFRM 103
Query: 380 ADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 431
D G + LK +L GE ++ +++++ ++ + + ++ Y++F++
Sbjct: 104 XDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 51.2 bits (121), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 7/63 (11%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGGKLSFPDFL 320
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G + FP+FL
Sbjct: 11 EFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 321 KVM 323
+M
Sbjct: 70 TMM 72
Score = 28.5 bits (62), Expect = 7.2, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 30/66 (45%)
Query: 367 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 426
E+ E +AF D GT+ K L V+ + G+ + E+ + E + N + +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 427 EDFVKI 432
+F+ +
Sbjct: 66 PEFLTM 71
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 51.2 bits (121), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 7/63 (11%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGGKLSFPDFL 320
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G + FP+FL
Sbjct: 12 EFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 70
Query: 321 KVM 323
+M
Sbjct: 71 TMM 73
Score = 28.5 bits (62), Expect = 7.2, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 30/66 (45%)
Query: 367 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 426
E+ E +AF D GT+ K L V+ + G+ + E+ + E + N + +
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 427 EDFVKI 432
+F+ +
Sbjct: 67 PEFLTM 72
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 51.2 bits (121), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 7/63 (11%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGGKLSFPDFL 320
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G + FP+FL
Sbjct: 11 EFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 321 KVM 323
+M
Sbjct: 70 TMM 72
Score = 28.5 bits (62), Expect = 7.1, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 30/66 (45%)
Query: 367 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 426
E+ E +AF D GT+ K L V+ + G+ + E+ + E + N + +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 427 EDFVKI 432
+F+ +
Sbjct: 66 PEFLTM 71
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 42/172 (24%)
Query: 267 EFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVM 323
EF+ F +F A +G+I T EL +MR LG +PT EL++ + E
Sbjct: 19 EFKAAFDIFVLGAEDGSISTK-ELGKVMRMLGQNPTPEELQEMIDE-------------- 63
Query: 324 HTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAED----IPKEVVDAFKA 379
D SG + F +FL VM S +D +E+ D F+
Sbjct: 64 -------------------VDEDGSGTVDFDEFL-VMMVRSMKDDSKGKTEEELSDLFRM 103
Query: 380 ADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 431
D G + + LK +L GE ++ +++++ ++ + + ++ Y++F++
Sbjct: 104 FDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 50.8 bits (120), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 7/63 (11%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGGKLSFPDFL 320
EF+E F L+ ++G TI T EL +MRSLG++PT AEL+ + A+ G + FP+FL
Sbjct: 11 EFKEAFSLYDKDGDGTITT-KELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 321 KVM 323
+M
Sbjct: 70 TMM 72
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 50.8 bits (120), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 7/63 (11%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGGKLSFPDFL 320
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G + FP+FL
Sbjct: 11 EFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL 69
Query: 321 KVM 323
+M
Sbjct: 70 TMM 72
Score = 29.3 bits (64), Expect = 4.7, Method: Composition-based stats.
Identities = 16/73 (21%), Positives = 32/73 (43%)
Query: 367 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 426
E+ E +AF D GT+ K L V+ + G+ + E+ + E + N + +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 427 EDFVKIACAPVPD 439
+F+ + + D
Sbjct: 66 PEFLTMMARKMKD 78
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 42/172 (24%)
Query: 267 EFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVM 323
EF+ F +F A +G+I T EL +MR LG +PT EL++ + E
Sbjct: 19 EFKAAFDIFVLGAEDGSISTK-ELGKVMRMLGQNPTPEELQEMIDE-------------- 63
Query: 324 HTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAED----IPKEVVDAFKA 379
D SG + F +FL VM S +D +E+ D F+
Sbjct: 64 -------------------VDEDGSGTVDFDEFL-VMMVRSMKDDSKGKSEEELSDLFRM 103
Query: 380 ADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 431
D G + + LK +L GE ++ +++++ ++ + + ++ Y++F++
Sbjct: 104 FDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 50.4 bits (119), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 40/63 (63%), Gaps = 7/63 (11%)
Query: 267 EFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGGKLSFPDFL 320
EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G + FP+FL
Sbjct: 11 EFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFL 69
Query: 321 KVM 323
+M
Sbjct: 70 TMM 72
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 42/172 (24%)
Query: 267 EFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVM 323
EF+ F +F A +G+I T EL +MR LG +PT EL++ + E
Sbjct: 19 EFKAAFDIFVLGAEDGSISTK-ELGKVMRMLGQNPTPEELQEMIDE-------------- 63
Query: 324 HTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAED----IPKEVVDAFKA 379
D SG + F +FL VM S +D +E+ D F+
Sbjct: 64 -------------------VDEDGSGTVDFDEFL-VMMVRSMKDDSKGKSEEELSDLFRM 103
Query: 380 ADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 431
D G + LK +L GE ++ +++++ ++ + + ++ Y++F++
Sbjct: 104 WDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 50.1 bits (118), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 38/62 (61%), Gaps = 5/62 (8%)
Query: 267 EFRECFFLFARNGT-IKTLDELSVIMRSLGMSPTIAELKKYL----AEKGGKLSFPDFLK 321
EF+E F LF ++G T EL +MRSLG +PT AEL+ + A+ G + FP+FL
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 322 VM 323
+M
Sbjct: 71 LM 72
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 71/171 (41%), Gaps = 39/171 (22%)
Query: 267 EFRECFFLF-ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHT 325
EF+ F +F A G ++ EL +MR LG +PT EL + E
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEE---------------- 61
Query: 326 HSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDI----PKEVVDAFKAAD 381
D SG + F +FL VM ED +E+ + F+ D
Sbjct: 62 -----------------VDEDGSGTIDFEEFL-VMMVRQMKEDAKGKSEEELAECFRIFD 103
Query: 382 TTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKI 432
G + A+ L + GE ++ +E++ + ++ + + ++ +++F+K+
Sbjct: 104 RNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKM 154
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 369 IPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKV 424
+ +E++ FKAA D G + K L V+ G+ + +E+D I E + + +
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 425 RYEDFV 430
+E+F+
Sbjct: 71 DFEEFL 76
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 7/104 (6%)
Query: 338 DAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPK----EVVDAFKAADTTKSGTVPAKYL 393
D F T K G+ S P F + + + D + + ++AFK D G + L
Sbjct: 45 DVFAVGGTHKMGEKSLP-FEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAEL 103
Query: 394 KHVLVNWGEGLSSKEVDQIFREANVT--MNSKVRYEDFVKIACA 435
+HVL GE LS ++VD+I + ++ + V+YEDFVK A
Sbjct: 104 RHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 147
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 42/172 (24%)
Query: 267 EFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVM 323
EF+ F +F A +G I T EL +MR LG +PT EL++ + E
Sbjct: 19 EFKAAFDIFVLGAEDGCISTK-ELGKVMRMLGQNPTPEELQEMIDE-------------- 63
Query: 324 HTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFL----KVMHTHSKAEDIPKEVVDAFKA 379
D SG + F +FL + M SK + +E+ D F+
Sbjct: 64 -------------------VDEDGSGTVDFDEFLVMMVRCMKDDSKGK-TEEELSDLFRM 103
Query: 380 ADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 431
D G + + LK +L GE ++ +++++ ++ + + ++ Y++F++
Sbjct: 104 FDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLE 155
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 71/171 (41%), Gaps = 39/171 (22%)
Query: 267 EFRECFFLF-ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMHT 325
EF+ F +F A G ++ EL +MR LG +PT EL + E
Sbjct: 18 EFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEE---------------- 61
Query: 326 HSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDI----PKEVVDAFKAAD 381
D SG + F +FL VM ED +E+ + F+ D
Sbjct: 62 -----------------VDEDGSGTIDFEEFL-VMMVRQMKEDAKGKSEEELAELFRIFD 103
Query: 382 TTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKI 432
G + A+ L + GE ++ +E++ + ++ + + ++ +++F+K+
Sbjct: 104 RNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKM 154
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 369 IPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKV 424
+ +E++ FKAA D G + K L V+ G+ + +E+D I E + + +
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 425 RYEDFV 430
+E+F+
Sbjct: 71 DFEEFL 76
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 74/181 (40%), Gaps = 39/181 (21%)
Query: 257 KVFTFKTPYLEFRECFFLF-ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLS 315
+ F + EF+ F +F A G + EL +MR LG +PT EL + E
Sbjct: 11 RAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEE------ 64
Query: 316 FPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDI----PK 371
D SG + F +FL VM ED +
Sbjct: 65 ---------------------------VDEDGSGTIDFEEFL-VMMVRQMKEDAKGKSEE 96
Query: 372 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 431
E+ D F+ D G + + L +L GE ++ ++++ + ++++ + ++ +++F+K
Sbjct: 97 ELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLK 156
Query: 432 I 432
+
Sbjct: 157 M 157
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 42/172 (24%)
Query: 267 EFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVM 323
EF+ F +F A +G+I T EL +MR LG +PT EL++ + E
Sbjct: 19 EFKAAFDIFVLGAEDGSISTK-ELGKVMRMLGQNPTPEELQEMIDE-------------- 63
Query: 324 HTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAED----IPKEVVDAFKA 379
D SG + F +FL VM S +D +E+ D F+
Sbjct: 64 -------------------VDEDGSGTVDFDEFL-VMMVRSMKDDSKGKSEEELSDLFRM 103
Query: 380 ADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 431
D G + LK +L GE ++ +++++ ++ + + ++ Y+++++
Sbjct: 104 FDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEWLE 155
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 74/181 (40%), Gaps = 39/181 (21%)
Query: 257 KVFTFKTPYLEFRECFFLF-ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLS 315
+ F + EF+ F +F A G + EL +MR LG +PT EL + E
Sbjct: 11 RAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEE------ 64
Query: 316 FPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDI----PK 371
D SG + F +FL VM ED +
Sbjct: 65 ---------------------------VDEDGSGTIDFEEFL-VMMVRQMKEDAKGKSEE 96
Query: 372 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 431
E+ D F+ D G + + L +L GE ++ ++++ + ++++ + ++ +++F+K
Sbjct: 97 ELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLK 156
Query: 432 I 432
+
Sbjct: 157 M 157
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 47.4 bits (111), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 335 EVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLK 394
E+ D D +G + FP+FL +M K D +E+ +AF+ D +G + A L+
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 61
Query: 395 HVLVNWG 401
HV+ N G
Sbjct: 62 HVMTNLG 68
Score = 35.4 bits (80), Expect = 0.059, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 308 AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVM 360
A+ G + FP+FL +M K D +E+ +AF+ D +G +S + VM
Sbjct: 12 ADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 64
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 42/172 (24%)
Query: 267 EFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVM 323
EF+ F +F A +G+I T EL +MR LG +PT EL++ + E
Sbjct: 19 EFKAAFDIFVLGAEDGSISTK-ELGKVMRMLGQNPTPEELQEMIDE-------------- 63
Query: 324 HTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAED----IPKEVVDAFKA 379
D SG + F +FL VM S +D +E+ D F+
Sbjct: 64 -------------------VDEDGSGTVDFDEFL-VMMVRSMKDDSKGKSEEELSDLFRM 103
Query: 380 ADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 431
D G + LK +L GE ++ +++++ ++ + + ++ Y++ ++
Sbjct: 104 FDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEXLE 155
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 74/181 (40%), Gaps = 39/181 (21%)
Query: 257 KVFTFKTPYLEFRECFFLF-ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLS 315
+ F + EF+ F +F A G + EL +MR LG +PT EL + E
Sbjct: 8 RAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEE------ 61
Query: 316 FPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDI----PK 371
D SG + F +FL VM ED +
Sbjct: 62 ---------------------------VDEDGSGTIDFEEFL-VMMVRQMKEDAKGKSEE 93
Query: 372 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 431
E+ + F+ D G + + L +L GE ++ ++++ + ++++ + ++ +++F+K
Sbjct: 94 ELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLK 153
Query: 432 I 432
+
Sbjct: 154 M 154
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 74/181 (40%), Gaps = 39/181 (21%)
Query: 257 KVFTFKTPYLEFRECFFLF-ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLS 315
+ F + EF+ F +F A G + EL +MR LG +PT EL + E
Sbjct: 11 RAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEE------ 64
Query: 316 FPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDI----PK 371
D SG + F +FL VM ED +
Sbjct: 65 ---------------------------VDEDGSGTIDFEEFL-VMMVRQMKEDAKGKSEE 96
Query: 372 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 431
E+ + F+ D G + + L +L GE ++ ++++ + ++++ + ++ +++F+K
Sbjct: 97 ELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLK 156
Query: 432 I 432
+
Sbjct: 157 M 157
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 46.6 bits (109), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 267 EFRECFFLFARNGTIKTLD--ELSVIMRSLGMSPTIAELKKYLA----EKGGKLSFPDFL 320
E RE F LF +GT T+D EL V MR+LG P E+KK ++ E GK++F DFL
Sbjct: 32 EIREAFDLFDADGT-GTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFL 90
Query: 321 KVM 323
VM
Sbjct: 91 TVM 93
Score = 29.3 bits (64), Expect = 4.8, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 32/66 (48%)
Query: 367 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 426
E+ +E+ +AF D +GT+ K LK + G +E+ ++ E + K+ +
Sbjct: 27 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 86
Query: 427 EDFVKI 432
DF+ +
Sbjct: 87 GDFLTV 92
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 41/173 (23%)
Query: 267 EFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAEL----KKYLAEKGGKLSFPDFL 320
E RE F F ++ G I D L MR++G PT EL ++ GG + F DF+
Sbjct: 26 ELREAFREFDKDKDGYINCRD-LGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 84
Query: 321 KVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAA 380
++M PK + + D + V KE+ DAF+
Sbjct: 85 ELMG--------PKLLAET--------------ADMIGV-----------KELRDAFREF 111
Query: 381 DTTKSGTVPAKYLKHVLVN-WGEGLSSKEVDQIFREANVTMNSKVRYEDFVKI 432
DT G + L+ + G + +++++I R+ ++ + +V +E+FV++
Sbjct: 112 DTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRM 164
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/62 (22%), Positives = 34/62 (54%)
Query: 371 KEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFV 430
+E+ +AF+ D K G + + L + + G + E+ ++ ++ N+ + V ++DFV
Sbjct: 25 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 84
Query: 431 KI 432
++
Sbjct: 85 EL 86
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 41/173 (23%)
Query: 267 EFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAEL----KKYLAEKGGKLSFPDFL 320
E RE F F ++ G I D L MR++G PT EL ++ GG + F DF+
Sbjct: 12 ELREAFREFDKDKDGYINCRD-LGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 70
Query: 321 KVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAA 380
++M PK + + D + V KE+ DAF+
Sbjct: 71 ELMG--------PKLLAET--------------ADMIGV-----------KELRDAFREF 97
Query: 381 DTTKSGTVPAKYLKHVLVN-WGEGLSSKEVDQIFREANVTMNSKVRYEDFVKI 432
DT G + L+ + G + +++++I R+ ++ + +V +E+FV++
Sbjct: 98 DTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRM 150
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/62 (22%), Positives = 34/62 (54%)
Query: 371 KEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFV 430
+E+ +AF+ D K G + + L + + G + E+ ++ ++ N+ + V ++DFV
Sbjct: 11 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 70
Query: 431 KI 432
++
Sbjct: 71 EL 72
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 41/173 (23%)
Query: 267 EFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAEL----KKYLAEKGGKLSFPDFL 320
E RE F F ++ G I D L MR++G PT EL ++ GG + F DF+
Sbjct: 12 ELREAFREFDKDKDGYINCRD-LGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 70
Query: 321 KVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAA 380
++M PK + + D + V KE+ DAF+
Sbjct: 71 ELMG--------PKLLAET--------------ADMIGV-----------KELRDAFREF 97
Query: 381 DTTKSGTVPAKYLKHVL-VNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKI 432
DT G + L+ + G + +++++I R+ ++ + +V +E+FV++
Sbjct: 98 DTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRM 150
Score = 29.6 bits (65), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/62 (22%), Positives = 34/62 (54%)
Query: 371 KEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFV 430
+E+ +AF+ D K G + + L + + G + E+ ++ ++ N+ + V ++DFV
Sbjct: 11 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 70
Query: 431 KI 432
++
Sbjct: 71 EL 72
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 73/181 (40%), Gaps = 39/181 (21%)
Query: 257 KVFTFKTPYLEFRECFFLF-ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLS 315
+ F + EF+ F +F A G + EL +MR LG +PT EL + E
Sbjct: 11 RAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEE------ 64
Query: 316 FPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDI----PK 371
D SG + F +FL VM ED +
Sbjct: 65 ---------------------------VDEDGSGTIDFEEFL-VMMVRQMKEDAKGKSEE 96
Query: 372 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 431
E+ + F+ D G + + L +L GE + ++++ + ++++ + ++ +++F+K
Sbjct: 97 ELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLK 156
Query: 432 I 432
+
Sbjct: 157 M 157
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 45.1 bits (105), Expect = 8e-05, Method: Composition-based stats.
Identities = 38/168 (22%), Positives = 70/168 (41%), Gaps = 40/168 (23%)
Query: 267 EFRECFFLF--ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
EF+E F + R+G I ++L ++ S+G +PT L+ ++E G ++F FL +
Sbjct: 8 EFKEAFNMIDQNRDGFIDK-EDLHDMLASMGKNPTDEYLEGMMSEAPGPINFTMFLTMFG 66
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D P++V+ +AF D
Sbjct: 67 EKLNGTD-PEDVIR------------------------------------NAFACFDEEA 89
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKI 432
SG + +L+ +L G+ + +EVD+++REA + Y +F +I
Sbjct: 90 SGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRI 137
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 67/184 (36%), Gaps = 43/184 (23%)
Query: 253 RSGYKVFTFKTPYL--EFRECFFLFA--RNGTIKTLDELSVIMRSLGMSPTIAELKKYLA 308
RSG VF T + EF+E F L ++G I D + SLG T EL +A
Sbjct: 42 RSGSNVFAMFTQHQVQEFKEAFQLIDQDKDGFISKND-IRATFDSLGRLCTEQELDSMVA 100
Query: 309 EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAED 368
E G ++F FL + D ED
Sbjct: 101 EAPGPINFTMFLTIFGDRIAGTD----------------------------------EED 126
Query: 369 IPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYED 428
+ +V+AF D G + LK L WGE S EVDQ EA + N + +
Sbjct: 127 V---IVNAFNLFDEG-DGKCKEETLKRSLTTWGEKFSQDEVDQALSEAPIDGNGLIDIKK 182
Query: 429 FVKI 432
F +I
Sbjct: 183 FAQI 186
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 43.1 bits (100), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 267 EFRECFFLFAR--NGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGKLSFPDFL 320
EF+E F LF + NG+I + EL+ +MRSLG+SP+ AE+ + E ++ F +FL
Sbjct: 11 EFKEAFALFDKDNNGSISS-SELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFL 69
Query: 321 KVMHTHSK 328
+M K
Sbjct: 70 ALMSRQLK 77
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 42.7 bits (99), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 376 AFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKI 432
AF+A D G + L+ + G+ L +E+D + REA+V + +V YE+F ++
Sbjct: 11 AFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARM 67
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 349 GKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKE 408
G+L+F FL + D + +AF D G +P YLK +L N G+ S +E
Sbjct: 63 GQLNFTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEE 122
Query: 409 VDQIFREANVTMNSKVRYEDFVKI 432
+ ++++A + N + Y V I
Sbjct: 123 IKNVWKDAPLK-NKQFNYNKMVDI 145
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 362 THSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 421
T +K ED K AF+ D +G V L+++L GE L+ EVD++ + V N
Sbjct: 78 TKAKTEDFVK----AFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSN 133
Query: 422 SKVRYEDFVK 431
++ Y+ F++
Sbjct: 134 GEIDYKKFIE 143
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 42.4 bits (98), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Query: 267 EFRECFFLFARNGTIKTLD--ELSVIMRSLGMSPTIAELKKYLAE----KGGKLSFPDFL 320
E RE F LF +G+ T+D EL V MR+LG P E+KK ++E G + F +FL
Sbjct: 31 EIREAFDLFDTDGS-GTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFL 89
Query: 321 KVM 323
+M
Sbjct: 90 TMM 92
Score = 34.3 bits (77), Expect = 0.14, Method: Composition-based stats.
Identities = 19/69 (27%), Positives = 36/69 (52%)
Query: 367 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 426
E+ +E+ +AF DT SGT+ AK LK + G +E+ ++ E + + + +
Sbjct: 26 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDF 85
Query: 427 EDFVKIACA 435
E+F+ + A
Sbjct: 86 EEFLTMMTA 94
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 40/185 (21%)
Query: 262 KTPYLEFRECFFLF----ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFP 317
K E RE F LF R+G + ++ ++R LGM+PT A++ ++ K
Sbjct: 5 KDEIEEVREVFDLFDFWDGRDGDVDAA-KVGDLLRCLGMNPTEAQVHQHGGTK------- 56
Query: 318 DFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAF 377
K+ K E+I L + + T + A+ E ++AF
Sbjct: 57 ---KMGEKAYKLEEI------------------LPIYEEMSSKDTGTAAD----EFMEAF 91
Query: 378 KAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANV--TMNSKVRYEDFV-KIAC 434
K D G + + +++VL GE ++ + + IF ++ ++ ++YED + K+
Sbjct: 92 KTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMA 151
Query: 435 APVPD 439
P PD
Sbjct: 152 GPFPD 156
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 42.0 bits (97), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 40/69 (57%)
Query: 364 SKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSK 423
S D +E++ AF+ D SGT+ K L+ V GE L+ +E+ ++ EA+ +++
Sbjct: 2 SGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNE 61
Query: 424 VRYEDFVKI 432
+ ++F++I
Sbjct: 62 IDEDEFIRI 70
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 41.6 bits (96), Expect = 9e-04, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 364 SKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSK 423
+K ED V AF+ D +G V L+++L GE L+ EVD++ + V N +
Sbjct: 2 AKTEDF----VKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGE 57
Query: 424 VRYEDFVK 431
+ Y+ F++
Sbjct: 58 IDYKKFIE 65
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 266 LEFRECFFLFARNGT-IKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGKLSFPDFL 320
++F+E F LF ++G T++EL+ ++RSL +PT EL+ ++E G + F +FL
Sbjct: 10 VDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFL 69
Query: 321 KVM 323
+M
Sbjct: 70 SLM 72
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 266 LEFRECFFLFARNGT-IKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGKLSFPDFL 320
++F+E F LF ++G T++EL+ ++RSL +PT EL+ ++E G + F +FL
Sbjct: 10 VDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEFDEFL 69
Query: 321 KVM 323
+M
Sbjct: 70 SLM 72
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 40.8 bits (94), Expect = 0.001, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 39/66 (59%)
Query: 367 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 426
+D +E++ AFK D ++G + K LK V GE L+ +E+ ++ EA+ + +V
Sbjct: 7 KDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSE 66
Query: 427 EDFVKI 432
++F++I
Sbjct: 67 QEFLRI 72
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 331 DIPK-EVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVP 389
++PK E++D D+ + + DF VM D E+ AF+ D +G +
Sbjct: 55 ELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKIS 114
Query: 390 AKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKI 432
K L+ V GE L+ +E+ + E ++ + ++ +F+ I
Sbjct: 115 IKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAI 157
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 267 EFRECFFLFARNGTIKTLD--ELSVIMRSLGMS----PTIAELKKYLAEKGGKLSFPDFL 320
E E F LF N LD EL V M++LG + + +Y +E + + DF
Sbjct: 24 EIYEAFSLFDMNND-GFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDFY 82
Query: 321 KVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKV 359
VM D E+ AF+ D +GK+S + +V
Sbjct: 83 IVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRV 121
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 38.9 bits (89), Expect = 0.006, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 267 EFRECFFLFARNGTIK-TLDELSVIMRSLGMSPT---IAEL-KKYLAEKGGKLSFPDFLK 321
E++E F LF ++ K T +EL +MR+LG +PT I+E+ K Y + GK FL
Sbjct: 15 EYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLT 74
Query: 322 VMHTHSKAED 331
+M + + D
Sbjct: 75 IMLEYGQEVD 84
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/106 (20%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
Query: 334 KEVVDAFKAADTTKSGKLSFPDF----LKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVP 389
++++D F D +G + F F + + E + +E+ +AF+ D +G +
Sbjct: 53 RQLIDEF---DPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYIS 109
Query: 390 AKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKIACA 435
++ +L E LSS+++D + E + + V +E+F+ +
Sbjct: 110 TDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTG 155
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 86 LSLKSNSLTSLPPD-IGRLTNLRVLCLTDNCLQNASIPFTL-TFCKNLTHLYLDNNLLDA 143
L L+SN L+SLP RLT LR+L L DN LQ ++P + KNL L++ +N L A
Sbjct: 42 LDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ--TLPAGIFKELKNLETLWVTDNKLQA 99
Query: 144 LP 145
LP
Sbjct: 100 LP 101
Score = 32.7 bits (73), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 83 VEVLSLKSNSLTSLPPDI-GRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLL 141
+ +L L N L +LP I L NL L +TDN LQ I NL L LD N L
Sbjct: 63 LRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLV-NLAELRLDRNQL 121
Query: 142 DALP 145
+LP
Sbjct: 122 KSLP 125
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 38.1 bits (87), Expect = 0.011, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 267 EFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGKLSFPDF 319
EF+ F +F A +G+I T EL +MR LG +PT EL++ + E G + F +F
Sbjct: 19 EFKAAFDIFVLGAEDGSIST-KELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 320 LKVMHTHSKAED 331
L VM S +D
Sbjct: 78 L-VMMVRSMKDD 88
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 38.1 bits (87), Expect = 0.011, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 267 EFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGKLSFPDF 319
EF+ F +F A +G+I T EL +MR LG +PT EL++ + E G + F +F
Sbjct: 19 EFKAAFDIFVLGAEDGSIST-KELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 320 LKVMHTHSKAED 331
L VM S +D
Sbjct: 78 L-VMMVRSMKDD 88
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 38.1 bits (87), Expect = 0.011, Method: Composition-based stats.
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 9/72 (12%)
Query: 267 EFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGKLSFPDF 319
EF+ F +F A +G+I T EL +MR LG +PT EL++ + E G + F +F
Sbjct: 19 EFKAAFDIFVLGAEDGSIST-KELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 320 LKVMHTHSKAED 331
L VM S +D
Sbjct: 78 L-VMMVRSMKDD 88
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 37.7 bits (86), Expect = 0.013, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 367 EDI-PKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVR 425
ED+ +E+ +AF+ D K G + L+ +L + G+ L+ E++ + E + + V
Sbjct: 2 EDLDERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVD 61
Query: 426 YEDF 429
YE+F
Sbjct: 62 YEEF 65
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 37.7 bits (86), Expect = 0.014, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Query: 300 IAELKKYLA----EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPD 355
I E+K+ + ++ G +S D + +A D KE+ K A G L+F
Sbjct: 6 IQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPD-DKELTAMLKEA----PGPLNFTM 60
Query: 356 FLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFRE 415
FL + D + + +AF D ++ + +Y+K +L N G+ + E+ F+E
Sbjct: 61 FLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKE 120
Query: 416 ANV 418
A V
Sbjct: 121 APV 123
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 37.4 bits (85), Expect = 0.015, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Query: 300 IAELKKYLA----EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPD 355
I E+K+ + ++ G +S D + +A D KE+ K A G L+F
Sbjct: 3 IQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPD-DKELTAMLKEA----PGPLNFTM 57
Query: 356 FLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFRE 415
FL + D + + +AF D ++ + +Y+K +L N G+ + E+ F+E
Sbjct: 58 FLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKE 117
Query: 416 ANV 418
A V
Sbjct: 118 APV 120
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 37.4 bits (85), Expect = 0.016, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 371 KEVVDAFKAADTTKSGTVPAKYLKHVLVN-WGEGLSSKEVDQIFREANVTMNSKVRYEDF 429
KE+ DAF+ DT G + L+ + G + +++++I R+ ++ + +V +E+F
Sbjct: 7 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 66
Query: 430 VKI 432
V++
Sbjct: 67 VRM 69
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 37.4 bits (85), Expect = 0.016, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Query: 300 IAELKKYLA----EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPD 355
I E+K+ + ++ G +S D + +A D KE+ K A G L+F
Sbjct: 6 IQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPD-DKELTAMLKEA----PGPLNFTM 60
Query: 356 FLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFRE 415
FL + D + + +AF D ++ + +Y+K +L N G+ + E+ F+E
Sbjct: 61 FLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKE 120
Query: 416 ANV 418
A V
Sbjct: 121 APV 123
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 37.4 bits (85), Expect = 0.017, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 9/123 (7%)
Query: 300 IAELKKYLA----EKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPD 355
I E+K+ + ++ G +S D + +A D KE+ K A G L+F
Sbjct: 5 IQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPD-DKELTAMLKEA----PGPLNFTM 59
Query: 356 FLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFRE 415
FL + D + + +AF D ++ + +Y+K +L N G+ + E+ F+E
Sbjct: 60 FLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKE 119
Query: 416 ANV 418
A V
Sbjct: 120 APV 122
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 36.2 bits (82), Expect = 0.033, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 267 EFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGKLSFPDF 319
EF+ F +F A +G I T EL +MR LG +PT EL++ + E G + F +F
Sbjct: 19 EFKAAFDIFIQDAEDGCIST-KELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 320 LKVM 323
L +M
Sbjct: 78 LVMM 81
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 36.2 bits (82), Expect = 0.033, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 267 EFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGKLSFPDF 319
EF+ F +F A +G I T EL +MR LG +PT EL++ + E G + F +F
Sbjct: 19 EFKAAFDIFVQGAEDGCIST-KELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 320 LKVM 323
L +M
Sbjct: 78 LVMM 81
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 36.2 bits (82), Expect = 0.033, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 267 EFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGKLSFPDF 319
EF+ F +F A +G I T EL +MR LG +PT EL++ + E G + F +F
Sbjct: 19 EFKAAFDIFIQDAEDGCIST-KELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 320 LKVM 323
L +M
Sbjct: 78 LVMM 81
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 36.2 bits (82), Expect = 0.033, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 267 EFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGKLSFPDF 319
EF+ F +F A +G I T EL +MR LG +PT EL++ + E G + F +F
Sbjct: 19 EFKAAFDIFVLGAEDGCIST-KELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
Query: 320 LKVM 323
L +M
Sbjct: 78 LVMM 81
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 35.8 bits (81), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 63/168 (37%), Gaps = 41/168 (24%)
Query: 267 EFRECFFLFA--RNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
E +E F + R+G I +++L + SLG +P EL L E G L+F FL +
Sbjct: 24 EMKEAFTMIDQNRDGFI-DINDLKEMFSSLGRTPDDKELTAMLKEAPGPLNFTMFLSIFS 82
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D + + +AF D + KL+
Sbjct: 83 DKLSGTDSEETIRNAFGMFDELDTKKLNI------------------------------- 111
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKI 432
+Y+K +L N G+ + E+ F+EA V K Y FV +
Sbjct: 112 ------EYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVRFVAM 152
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 35.8 bits (81), Expect = 0.049, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 62/168 (36%), Gaps = 41/168 (24%)
Query: 267 EFRECFFLF--ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
E +E F + R+G I +++L SLG +P EL L E G L+F FL +
Sbjct: 3 EMKEAFTMIDQNRDGFID-INDLKEEFSSLGRTPDDKELTAMLKEAPGPLNFTMFLSIFS 61
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D + + +AF D + KL+
Sbjct: 62 DKLSGTDSEETIRNAFGMFDEDATKKLNI------------------------------- 90
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKI 432
+Y+K +L N G+ + E+ F+EA V K Y FV +
Sbjct: 91 ------EYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVRFVAM 131
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 35.8 bits (81), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 63/168 (37%), Gaps = 41/168 (24%)
Query: 267 EFRECFFLFA--RNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
E +E F + R+G I +++L + SLG +P EL L E G L+F FL +
Sbjct: 24 EMKEAFTMIDQNRDGFI-DINDLKEMFSSLGRTPDDKELTAMLKEAPGPLNFTMFLSIFS 82
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D + + +AF D + KL+
Sbjct: 83 DKLSGTDSEETIRNAFGMFDELDTKKLNI------------------------------- 111
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKI 432
+Y+K +L N G+ + E+ F+EA V K Y FV +
Sbjct: 112 ------EYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVRFVAM 152
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 63/168 (37%), Gaps = 41/168 (24%)
Query: 267 EFRECFFLFA--RNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
E +E F + R+G I +++L + SLG +P EL L E G L+F FL +
Sbjct: 20 EMKEAFTMIDQNRDGFID-INDLKEMFSSLGRTPDDKELTAMLKEAPGPLNFTMFLSIFS 78
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D + + +AF D + KL+
Sbjct: 79 DKLSGTDSEETIRNAFGMFDELDTKKLNI------------------------------- 107
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKI 432
+Y+K +L N G+ + E+ F+EA V K Y FV +
Sbjct: 108 ------EYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVRFVAM 148
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 35.4 bits (80), Expect = 0.063, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 267 EFRECFFLF-ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGKLSFPDFLK 321
EF+ F +F A G + EL +MR LG +PT EL + E G + F +FL
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFL- 79
Query: 322 VMHTHSKAED 331
VM ED
Sbjct: 80 VMMVRQMKED 89
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 35.4 bits (80), Expect = 0.067, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 10/71 (14%)
Query: 257 KVFTFKTPYLEFRECFFLFARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGG 312
K+ FK Y+EF NG I + L ++ LG+ T ELKK + E G
Sbjct: 30 KLEGFKEKYMEFD-----LNGNGDIDIM-SLKRMLEKLGVPKTHLELKKLIGEVSSGSGE 83
Query: 313 KLSFPDFLKVM 323
S+PDFL++M
Sbjct: 84 TFSYPDFLRMM 94
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 35.0 bits (79), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 4/121 (3%)
Query: 312 GKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPK 371
G ++F D LK +E + E+ D AAD KSG + + +F+ +K E +
Sbjct: 25 GTITF-DELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLE-REE 82
Query: 372 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 431
+V AF D SG + ++ ++ GL +D + +E + + ++ Y +F
Sbjct: 83 NLVSAFSYFDKDGSGYITLDEIQQACKDF--GLDDIHIDDMIKEIDQDNDGQIDYGEFAA 140
Query: 432 I 432
+
Sbjct: 141 M 141
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 35.0 bits (79), Expect = 0.082, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 33/70 (47%), Gaps = 6/70 (8%)
Query: 267 EFRECFFLF-ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGKLSFPDFLK 321
EF+ F +F A G + EL +MR LG +PT EL + E G + F +FL
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL- 79
Query: 322 VMHTHSKAED 331
VM ED
Sbjct: 80 VMMVRQMKED 89
Score = 30.0 bits (66), Expect = 2.7, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 369 IPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKV 424
+ +E++ FKAA D G + K L V+ G+ + +E+D I E + + +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 425 RYEDFV 430
+E+F+
Sbjct: 74 DFEEFL 79
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Query: 331 DIPK-EVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVP 389
++PK E++D D+ + DF V D E+ AF+ D +G +
Sbjct: 55 ELPKREILDLIDEYDSEGRHLXKYDDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKIS 114
Query: 390 AKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKI 432
K L+ V GE L+ +E+ E ++ + ++ +F+ I
Sbjct: 115 IKNLRRVAKELGETLTDEELRAXIEEFDLDGDGEINENEFIAI 157
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 34.7 bits (78), Expect = 0.11, Method: Composition-based stats.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 267 EFRECFFLF-ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGKLSFPDFLK 321
EF+ F +F A G + EL +MR LG +PT EL + E G + F +FL
Sbjct: 10 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 69
Query: 322 VM 323
+M
Sbjct: 70 MM 71
Score = 30.0 bits (66), Expect = 2.7, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 369 IPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKV 424
+ +E++ FKAA D G + K L V+ G+ + +E+D I E + + +
Sbjct: 3 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 62
Query: 425 RYEDFV 430
+E+F+
Sbjct: 63 DFEEFL 68
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 303 LKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHT 362
KK + G LS +F+ + + + V+D F DT +G++ F +F++ +
Sbjct: 27 FKKLDLDNSGSLSVEEFMSLPELQQNP--LVQRVIDIF---DTDGNGEVDFKEFIEGVSQ 81
Query: 363 HSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVL-VNWGEGLSSKEVDQIFRE----AN 417
S D +++ AF+ D K G + L VL + G L ++ QI + A+
Sbjct: 82 FSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINAD 141
Query: 418 VTMNSKVRYEDFVKIACAPV 437
+ ++ +E+F CA V
Sbjct: 142 KDGDGRISFEEF----CAVV 157
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 303 LKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHT 362
KK + G LS +F+ + + + V+D F DT +G++ F +F++ +
Sbjct: 26 FKKLDLDNSGSLSVEEFMSLPELQQNP--LVQRVIDIF---DTDGNGEVDFKEFIEGVSQ 80
Query: 363 HSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVL-VNWGEGLSSKEVDQIFRE----AN 417
S D +++ AF+ D K G + L VL + G L ++ QI + A+
Sbjct: 81 FSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINAD 140
Query: 418 VTMNSKVRYEDFVKIACAPV 437
+ ++ +E+F CA V
Sbjct: 141 KDGDGRISFEEF----CAVV 156
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 34.7 bits (78), Expect = 0.12, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 34/62 (54%)
Query: 371 KEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFV 430
+E+ +AF+ D +G + ++ +L E LSS+++D + E + + V +E+F+
Sbjct: 3 QELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 62
Query: 431 KI 432
+
Sbjct: 63 GV 64
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 7/98 (7%)
Query: 68 LSYTPIGRRIFKCDT-VEVLSLKSNSLTSLPPDI-GRLTNLRVLCLTDNCLQNASIPFTL 125
L P+G +F T + VL L +N LT LP + RL +L+ L + C + +P +
Sbjct: 76 LGALPVG--VFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMC--CNKLTELPRGI 131
Query: 126 TFCKNLTHLYLDNNLLDALP-GFLLSMPQLDTVYRHGN 162
+LTHL LD N L ++P G + L Y GN
Sbjct: 132 ERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGN 169
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 34.3 bits (77), Expect = 0.15, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 267 EFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGKLSFPDF 319
EF+ F +F A +G I T EL +MR LG +PT EL++ + E G + F ++
Sbjct: 19 EFKAAFDIFVLGAEDGCIST-KELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEW 77
Query: 320 LKVM 323
L +M
Sbjct: 78 LVMM 81
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 34.3 bits (77), Expect = 0.15, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Query: 267 EFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGKLSFPDF 319
EF+ F +F A +G I T EL +MR LG +PT EL++ + E G + F ++
Sbjct: 19 EFKAAFDIFVLGAEDGCIST-KELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEW 77
Query: 320 LKVM 323
L +M
Sbjct: 78 LVMM 81
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 10/71 (14%)
Query: 257 KVFTFKTPYLEFRECFFLFARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGG 312
K+ FK Y+EF NG I + L ++ LG+ T ELKK + E G
Sbjct: 49 KLEGFKEKYMEFD-----LNGNGDIDIMS-LKRMLEKLGVPKTHLELKKLIGEVSSGSGE 102
Query: 313 KLSFPDFLKVM 323
S+PDFL++M
Sbjct: 103 TFSYPDFLRMM 113
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 303 LKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHT 362
KK + G LS +F+ + + + V+D F DT +G++ F +F++ +
Sbjct: 12 FKKLDLDNSGSLSVEEFMSLPELQQNP--LVQRVIDIF---DTDGNGEVDFKEFIEGVSQ 66
Query: 363 HSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVL-VNWGEGLSSKEVDQIFRE----AN 417
S D +++ AF+ D K G + L VL + G L ++ QI + A+
Sbjct: 67 FSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINAD 126
Query: 418 VTMNSKVRYEDFVKIACAPV 437
+ ++ +E+F CA V
Sbjct: 127 KDGDGRISFEEF----CAVV 142
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 43/88 (48%), Gaps = 5/88 (5%)
Query: 79 KCDTVEVLSLKSNSLTSLPPDI-GRLTNLRVLCLTDNCLQNASIP-FTLTFCKNLTHLYL 136
K ++ L L N L SLP + +LTNL L L N LQ S+P NLT L L
Sbjct: 107 KLTNLKELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQLQ--SLPKGVFDKLTNLTRLDL 164
Query: 137 DNNLLDALP-GFLLSMPQLDTVYRHGNH 163
DNN L +LP G + QL + + N
Sbjct: 165 DNNQLQSLPEGVFDKLTQLKQLSLNDNQ 192
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 14/140 (10%)
Query: 303 LKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHT 362
KK + G LS +F+ + + + V+D F DT +G++ F +F++ +
Sbjct: 13 FKKLDLDNSGSLSVEEFMSLPELQQNP--LVQRVIDIF---DTDGNGEVDFKEFIEGVSQ 67
Query: 363 HSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVL-VNWGEGLSSKEVDQIFRE----AN 417
S D +++ AF+ D K G + L VL + G L ++ QI + A+
Sbjct: 68 FSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINAD 127
Query: 418 VTMNSKVRYEDFVKIACAPV 437
+ ++ +E+F CA V
Sbjct: 128 KDGDGRISFEEF----CAVV 143
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 8/81 (9%)
Query: 86 LSLKSNSLTSLPPDI-GRLTNLRVLCLTDNCLQNASIP-FTLTFCKNLTHLYLDNNLLDA 143
L L N L SLP + +LTNL+ L L +N LQ S+P NLT+L L +N L +
Sbjct: 90 LILTGNQLQSLPNGVFDKLTNLKELVLVENQLQ--SLPDGVFDKLTNLTYLNLAHNQLQS 147
Query: 144 LPGF----LLSMPQLDTVYRH 160
LP L ++ +LD Y
Sbjct: 148 LPKGVFDKLTNLTELDLSYNQ 168
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 332 IPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEV-VDAFKAADTTKSGTVPA 390
IP ++ + D+ SG++ + DFL T K + KEV + FK D +G +
Sbjct: 91 IPPDIHQVLRDIDSNASGQIHYTDFLAA--TIDKQTYLKKEVCLIPFKFFDIDGNGKISV 148
Query: 391 KYLKHVLV--NWGEGLSSKEVDQIFREANVTMNSKVRYEDFV 430
+ LK + + L K +D + +E ++ + ++ + +F+
Sbjct: 149 EELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFM 190
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 56/154 (36%), Gaps = 40/154 (25%)
Query: 267 EFRECFFLFA--RNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKVMH 324
E +E F + R+G + D + I LG +P EL L E G L+F FL +
Sbjct: 19 EMKEAFSMIDVDRDGFVSKED-IKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLSIFS 77
Query: 325 THSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTK 384
D + + +AF D ++ KL+
Sbjct: 78 DKLSGTDSEETIRNAFAMFDEQETKKLNI------------------------------- 106
Query: 385 SGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANV 418
+Y+K +L N G+ + E+ F+EA V
Sbjct: 107 ------EYIKDLLENMGDNFNKDEMRMTFKEAPV 134
>pdb|1LTX|A Chain A, Structure Of Rab Escort Protein-1 In Complex With Rab
Geranylgeranyl Transferase And Isoprenoid
Length = 567
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 13/83 (15%)
Query: 86 LSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQN----ASIPFTLTFCKNLTHLYLDNNLL 141
L L N L +LPP + L L VL +DN L+N A++P L L L NN L
Sbjct: 468 LDLSHNRLRALPPALAALRCLEVLQASDNALENVDGVANLP-------RLQELLLCNNRL 520
Query: 142 DALPGF--LLSMPQLDTVYRHGN 162
L+S P+L + GN
Sbjct: 521 QQSAAIQPLVSCPRLVLLNLQGN 543
>pdb|1DCE|A Chain A, Crystal Structure Of Rab Geranylgeranyltransferase From
Rat Brain
pdb|1DCE|C Chain C, Crystal Structure Of Rab Geranylgeranyltransferase From
Rat Brain
Length = 567
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 13/83 (15%)
Query: 86 LSLKSNSLTSLPPDIGRLTNLRVLCLTDNCLQN----ASIPFTLTFCKNLTHLYLDNNLL 141
L L N L +LPP + L L VL +DN L+N A++P L L L NN L
Sbjct: 468 LDLSHNRLRALPPALAALRCLEVLQASDNALENVDGVANLP-------RLQELLLCNNRL 520
Query: 142 DALPGF--LLSMPQLDTVYRHGN 162
L+S P+L + GN
Sbjct: 521 QQSAAIQPLVSCPRLVLLNLQGN 543
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 32.7 bits (73), Expect = 0.37, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 35/67 (52%)
Query: 366 AEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVR 425
+E+ +E+ +AF DT K+G++ LK + G + E+ ++ E + N +
Sbjct: 2 SEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIG 61
Query: 426 YEDFVKI 432
++DF+ I
Sbjct: 62 FDDFLDI 68
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 32.7 bits (73), Expect = 0.44, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 267 EFRECFFLF-ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGKLSFPDFLK 321
EF+ F +F A G + L +MR LG +PT EL + E G + F +FL
Sbjct: 21 EFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFL- 79
Query: 322 VMHTHSKAED 331
VM ED
Sbjct: 80 VMMVRQMKED 89
Score = 30.0 bits (66), Expect = 2.5, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 369 IPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKV 424
+ +E++ FKAA D G + K L V+ G+ + +E+D I E + + +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 425 RYEDFV 430
+E+F+
Sbjct: 74 DFEEFL 79
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
Query: 371 KEVVDAFKAADTTKSGTVPAKYL---KHVLVNWGEGLSS-----KEVDQIFREANVTMNS 422
KE+ D FK D G + K L +VL N+ L +EVD I +E + N
Sbjct: 355 KELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNG 414
Query: 423 KVRYEDFVKI 432
+ Y +F+ +
Sbjct: 415 YIEYSEFISV 424
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 32.3 bits (72), Expect = 0.48, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 338 DAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTV 388
+ FK DT SG ++F D LK +E + E+ D AAD KSGT+
Sbjct: 27 ELFKMIDTDNSGTITF-DELKDGLKRVGSELMESEIKDLMDAADIDKSGTI 76
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 81 DTVEVLSLKSNSLTSLP-PDIGRLTNLRVLCLTDN---CLQNASIPFTLTFCKNLTHLYL 136
+T+ L L N + ++ D+ R + L L L N ++N S L+F L L+L
Sbjct: 193 ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGS----LSFLPTLRELHL 248
Query: 137 DNNLLDALPGFLLSMPQLDTVYRHGNH 163
DNN L +P L + L VY H N+
Sbjct: 249 DNNKLSRVPAGLPDLKLLQVVYLHTNN 275
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 31.6 bits (70), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/134 (20%), Positives = 56/134 (41%), Gaps = 13/134 (9%)
Query: 312 GKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPK 371
G LS +F K+ D K F+ D G + F +F+ + S+ + + +
Sbjct: 41 GHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGK-LEQ 99
Query: 372 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSS------------KEVDQIFREANVT 419
++ AF D +G + + ++ + +SS K ++IFR+ +
Sbjct: 100 KLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTN 159
Query: 420 MNSKVRYEDFVKIA 433
+ K+ E+F++ A
Sbjct: 160 RDGKLSLEEFIRGA 173
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 83 VEVLSLKSNSLTSLPPDI-GRLTNLRVLCLTDNCLQNASIP-FTLTFCKNLTHLYLDNNL 140
++ L SN LT++P + +LT L L L DN L+ SIP K+LTH+YL NN
Sbjct: 59 LQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLK--SIPRGAFDNLKSLTHIYLYNNP 116
Query: 141 LDA 143
D
Sbjct: 117 WDC 119
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 43/94 (45%), Gaps = 7/94 (7%)
Query: 344 DTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGE- 402
D+ SG + + +FL + K + AF+ D G + L HVL N +
Sbjct: 100 DSDGSGNIDYTEFLAAAIDRRQLS--KKLIYCAFRVFDVDNDGEITTAELAHVLFNGNKR 157
Query: 403 -GLSSKEVDQI---FREANVTMNSKVRYEDFVKI 432
++ ++V+Q+ RE + + K+ + +F ++
Sbjct: 158 GNITERDVNQVKKMIREVDKNGDGKIDFYEFSEM 191
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 30.4 bits (67), Expect = 2.3, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 365 KAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKV 424
+ E+I +E+ +AF+ D K G + + L + + G + E+ ++ ++ N+ + V
Sbjct: 5 RPEEI-EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 63
Query: 425 RYEDFVKI 432
++DFV++
Sbjct: 64 DFDDFVEL 71
>pdb|1MW7|A Chain A, X-Ray Structure Of Y162_helpy Northeast Structural
Genomics Consortium Target Pr6
Length = 240
Score = 29.6 bits (65), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 11/83 (13%)
Query: 273 FLFARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDF---LKVMHTHSKA 329
F + R K D++S + L + T+A A+ GG S PD L+ ++KA
Sbjct: 5 FEYRRAAKEKRWDKMSKVFPKLAKAITLA------AKDGG--SEPDTNAKLRTAILNAKA 56
Query: 330 EDIPKEVVDAFKAADTTKSGKLS 352
+++PK+ +DA ++K G LS
Sbjct: 57 QNMPKDNIDAAIKRASSKEGNLS 79
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 2/72 (2%)
Query: 320 LKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKA 379
L+V+ E+I + + F D KSG+++F + LK A E++D +A
Sbjct: 14 LRVIAESLSEEEIAG-LKEXFNXIDADKSGQITFEE-LKAGLKRVGANLKESEILDLXQA 71
Query: 380 ADTTKSGTVPAK 391
AD SGT+ K
Sbjct: 72 ADVDNSGTIDYK 83
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 29.3 bits (64), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/130 (18%), Positives = 55/130 (42%), Gaps = 29/130 (22%)
Query: 334 KEVVDAFKAADTTKSGKLSFPDF----------------LKVMHTHSK---AEDIPKEVV 374
+E+++ F+A DT SG +S P+ K++H + K E E
Sbjct: 27 QELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFK 86
Query: 375 D----------AFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKV 424
D F+ D++ G + + ++ L++ G +S + + R+ + +
Sbjct: 87 DLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSL 146
Query: 425 RYEDFVKIAC 434
++D+V+++
Sbjct: 147 GFDDYVELSI 156
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 83 VEVLSLKSNSLTSLPPDIGR-LTNLRVLCLTDNCLQNASIP-FTLTFCKNLTHLYLDNNL 140
+ L L L L P + R L L+ L L DN LQ ++P T NLTHL+L N
Sbjct: 106 LHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQ--ALPDNTFRDLGNLTHLFLHGNR 163
Query: 141 LDALPGFLL-SMPQLDTVYRHGNH 163
+ ++P + LD + H NH
Sbjct: 164 IPSVPEHAFRGLHSLDRLLLHQNH 187
>pdb|3H2Y|A Chain A, Crystal Structure Of Yqeh Gtpase From Bacillus Anthracis
With Dgdp Bound
Length = 368
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 36/71 (50%)
Query: 303 LKKYLAEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGKLSFPDFLKVMHT 362
LK Y + L+ DFL++++ K++ + ++VD F + G F KV+
Sbjct: 43 LKHYNEIQDVSLTDDDFLRILNGIGKSDALVVKIVDIFDFNGSWLPGLHRFVGNNKVLLV 102
Query: 363 HSKAEDIPKEV 373
+KA+ IPK V
Sbjct: 103 GNKADLIPKSV 113
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 83 VEVLSLKSNSLTSLPPDIGR-LTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLL 141
+ VL + N LTSLP R L L+ L L N L+ P LT L L L NN L
Sbjct: 102 LTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLP-PGLLTPTPKLEKLSLANNNL 160
Query: 142 DALP-GFLLSMPQLDTVYRHGNHNY 165
LP G L + LDT+ N Y
Sbjct: 161 TELPAGLLNGLENLDTLLLQENSLY 185
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 83 VEVLSLKSNSLTSLPPDIGR-LTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLL 141
+ VL + N LTSLP R L L+ L L N L+ P LT L L L NN L
Sbjct: 102 LTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLP-PGLLTPTPKLEKLSLANNNL 160
Query: 142 DALP-GFLLSMPQLDTVYRHGNHNY 165
LP G L + LDT+ N Y
Sbjct: 161 TELPAGLLNGLENLDTLLLQENSLY 185
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 28.9 bits (63), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 83 VEVLSLKSNSLTSLPPDIGR-LTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLL 141
+ VL + N LTSLP R L L+ L L N L+ P LT L L L NN L
Sbjct: 102 LTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLP-PGLLTPTPKLEKLSLANNNL 160
Query: 142 DALP-GFLLSMPQLDTVYRHGNHNY 165
LP G L + LDT+ N Y
Sbjct: 161 TELPAGLLNGLENLDTLLLQENSLY 185
>pdb|3GVX|A Chain A, Crystal Structure Of Glycerate Dehydrogenase Related
Protein From Thermoplasma Acidophilum
pdb|3GVX|B Chain B, Crystal Structure Of Glycerate Dehydrogenase Related
Protein From Thermoplasma Acidophilum
Length = 290
Score = 28.9 bits (63), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 148 LLSMPQLDTVYRHGNHNYFKS-TFMWYHSDI---HARIRSTSTRDEVLRKQKKLHQPSRL 203
++++ + D V + + K + +WY SD+ I T+ R+ +L +
Sbjct: 205 IVNVARADVVSKPDXIGFLKERSDVWYLSDVWWNEPEITETNLRNAILSPHVAGGXSGEI 264
Query: 204 QDLAVQSVIASKENFFE 220
D+A+Q + NFFE
Sbjct: 265 XDIAIQLAFENVRNFFE 281
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 28.5 bits (62), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 85 VLSLKSNSLT-SLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLLDA 143
+L+L N ++ S+P ++G L L +L L+ N L + IP ++ LT + L NN
Sbjct: 657 ILNLGHNDISGSIPDEVGDLRGLNILDLSSNKL-DGRIPQAMSALTMLTEIDLSNN---N 712
Query: 144 LPGFLLSMPQLDT 156
L G + M Q +T
Sbjct: 713 LSGPIPEMGQFET 725
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 28.5 bits (62), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 83 VEVLSLKSNSLTSLPPDIGR-LTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLL 141
+ VL + N LTSLP R L L+ L L N L+ P LT L L L NN L
Sbjct: 102 LTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLP-PGLLTPTPKLEKLSLANNNL 160
Query: 142 DALP-GFLLSMPQLDTVYRHGNHNY 165
LP G L + LDT+ N Y
Sbjct: 161 TELPAGLLNGLENLDTLLLQENSLY 185
>pdb|3TWI|D Chain D, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|E Chain E, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|F Chain F, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
Length = 179
Score = 28.5 bits (62), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 86 LSLKSNSLTSLPPDI-GRLTNLRVLCLTDNCLQNASIPF-TLTFCKNLTHLYLDNNLLDA 143
L+L N LT+LP + +LT L L L N Q SIP K+LTH+YL NN D
Sbjct: 69 LNLAVNQLTALPVGVFDKLTKLTHLALHIN--QLKSIPMGVFDNLKSLTHIYLFNNPWDC 126
>pdb|2JJZ|B Chain B, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|C Chain C, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|D Chain D, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2VTG|A Chain A, Crystal Structure Of Human Iba2, Trigonal Crystal Form
Length = 150
Score = 28.5 bits (62), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 12/93 (12%)
Query: 235 EYNQYHVCHYCNSAEPLDRSGYKVFTFKTPYLEFRECFFLFARNGTIKTLDELSVIMRSL 294
E N+ +C S E + K+ FK Y+EF G I + L +M L
Sbjct: 28 EINREFLCDQKYSDE--ENLPEKLTAFKEKYMEFD-----LNNEGEIDLMS-LKRMMEKL 79
Query: 295 GMSPTIAELKKYLAEKGG----KLSFPDFLKVM 323
G+ T E+KK ++E G +S+ DF+ +M
Sbjct: 80 GVPKTHLEMKKMISEVTGGVSDTISYRDFVNMM 112
>pdb|2JJZ|A Chain A, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
Length = 150
Score = 28.5 bits (62), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 12/93 (12%)
Query: 235 EYNQYHVCHYCNSAEPLDRSGYKVFTFKTPYLEFRECFFLFARNGTIKTLDELSVIMRSL 294
E N+ +C S E + K+ FK Y+EF G I + L +M L
Sbjct: 28 EINREFLCDQKYSDE--ENLPEKLTAFKEKYMEFD-----LNNEGEIDLMS-LKRMMEKL 79
Query: 295 GMSPTIAELKKYLAEKGG----KLSFPDFLKVM 323
G+ T E+KK ++E G +S+ DF+ +M
Sbjct: 80 GVPKTHLEMKKMISEVTGGVSDTISYRDFVNMM 112
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 28.1 bits (61), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Query: 83 VEVLSLKSNSLTSLPPDIGR-LTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLL 141
+ VL + N LTSLP R L L+ L L N L+ P LT L L L NN L
Sbjct: 103 LTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLP-PGLLTPTPKLEKLSLANNNL 161
Query: 142 DALP-GFLLSMPQLDTVYRHGNHNY 165
LP G L + LDT+ N Y
Sbjct: 162 TELPAGLLNGLENLDTLLLQENSLY 186
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 28.1 bits (61), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 85 VLSLKSNSLT-SLPPDIGRLTNLRVLCLTDNCLQNASIPFTLTFCKNLTHLYLDNNLLDA 143
+L+L N ++ S+P ++G L L +L L+ N L + IP ++ LT + L NN
Sbjct: 660 ILNLGHNDISGSIPDEVGDLRGLNILDLSSNKL-DGRIPQAMSALTMLTEIDLSNN---N 715
Query: 144 LPGFLLSMPQLDT 156
L G + M Q +T
Sbjct: 716 LSGPIPEMGQFET 728
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 28.1 bits (61), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Query: 83 VEVLSLKSNSLTSLPPDIGR-LTNLRVLCLTDNCLQNASIPF-TLTFCKNLTHLYLDNNL 140
+ L L L L P + R L L+ L L DN LQ ++P T NLTHL+L N
Sbjct: 106 LHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQ--ALPDDTFRDLGNLTHLFLHGNR 163
Query: 141 LDALP 145
+ ++P
Sbjct: 164 ISSVP 168
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.135 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,160,608
Number of Sequences: 62578
Number of extensions: 536215
Number of successful extensions: 1875
Number of sequences better than 100.0: 224
Number of HSP's better than 100.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 1371
Number of HSP's gapped (non-prelim): 473
length of query: 441
length of database: 14,973,337
effective HSP length: 102
effective length of query: 339
effective length of database: 8,590,381
effective search space: 2912139159
effective search space used: 2912139159
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)